Query 012219
Match_columns 468
No_of_seqs 467 out of 4053
Neff 9.8
Searched_HMMs 29240
Date Mon Mar 25 05:06:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012219.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012219hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4aoj_A High affinity nerve gro 100.0 1.9E-57 6.4E-62 435.7 19.4 260 170-446 41-321 (329)
2 4asz_A BDNF/NT-3 growth factor 100.0 7.7E-58 2.6E-62 432.5 15.4 258 170-444 13-289 (299)
3 3omv_A RAF proto-oncogene seri 100.0 7.1E-57 2.4E-61 425.9 21.6 261 169-444 35-300 (307)
4 4gt4_A Tyrosine-protein kinase 100.0 2E-57 6.7E-62 431.5 17.8 257 170-442 26-304 (308)
5 4b9d_A Serine/threonine-protei 100.0 2.7E-56 9.2E-61 427.8 16.2 253 170-438 24-277 (350)
6 4fih_A Serine/threonine-protei 100.0 4.3E-55 1.5E-59 418.8 20.0 253 170-441 74-328 (346)
7 4aw0_A HPDK1, 3-phosphoinositi 100.0 2.7E-55 9.2E-60 414.1 15.9 249 170-436 32-283 (311)
8 3hmm_A TGF-beta receptor type- 100.0 2E-54 6.9E-59 411.7 21.0 264 170-444 3-297 (303)
9 3fpq_A Serine/threonine-protei 100.0 3.7E-54 1.3E-58 404.4 22.1 247 173-438 29-283 (290)
10 4g3f_A NF-kappa-beta-inducing 100.0 3.3E-54 1.1E-58 411.5 22.1 250 170-442 58-314 (336)
11 4ase_A Vascular endothelial gr 100.0 4.7E-55 1.6E-59 422.4 16.3 267 162-443 56-346 (353)
12 3hyh_A Carbon catabolite-derep 100.0 2.6E-54 8.7E-59 402.0 18.9 252 170-441 13-267 (275)
13 4fie_A Serine/threonine-protei 100.0 7.1E-54 2.4E-58 420.3 21.2 253 170-441 151-405 (423)
14 3ubd_A Ribosomal protein S6 ki 100.0 1.9E-54 6.5E-59 408.3 11.4 249 170-437 24-281 (304)
15 4g31_A Eukaryotic translation 100.0 1.3E-52 4.6E-57 397.2 18.2 251 170-438 5-280 (299)
16 4b99_A Mitogen-activated prote 100.0 2E-49 6.7E-54 389.6 19.0 265 170-442 54-350 (398)
17 4f9c_A Cell division cycle 7-r 100.0 3.6E-48 1.2E-52 376.7 21.3 196 169-378 20-250 (361)
18 3v5w_A G-protein coupled recep 100.0 7.5E-48 2.6E-52 394.2 20.6 251 169-437 188-449 (689)
19 3uim_A Brassinosteroid insensi 100.0 1.4E-47 4.9E-52 369.9 20.7 284 157-445 17-312 (326)
20 3uto_A Twitchin; kinase, muscl 100.0 1.6E-47 5.5E-52 394.0 22.2 253 169-438 156-411 (573)
21 3p86_A Serine/threonine-protei 100.0 4.8E-47 1.6E-51 363.2 19.8 266 168-448 35-302 (309)
22 2qkw_B Protein kinase; three-h 100.0 1.4E-46 4.8E-51 362.2 20.2 275 160-443 29-314 (321)
23 3fxz_A Serine/threonine-protei 100.0 1E-45 3.5E-50 352.1 21.6 256 169-443 19-276 (297)
24 4eqm_A Protein kinase; transfe 100.0 1.2E-45 4.1E-50 351.2 21.2 263 170-445 11-276 (294)
25 3s95_A LIMK-1, LIM domain kina 100.0 3.1E-45 1.1E-49 351.0 23.7 258 169-443 9-281 (310)
26 2nru_A Interleukin-1 receptor- 100.0 7.6E-45 2.6E-49 347.8 26.3 277 158-443 13-305 (307)
27 2c30_A Serine/threonine-protei 100.0 3.6E-45 1.2E-49 352.2 23.4 263 158-439 23-296 (321)
28 1o6l_A RAC-beta serine/threoni 100.0 2.7E-45 9.1E-50 354.7 21.4 252 169-438 4-261 (337)
29 3fe3_A MAP/microtubule affinit 100.0 1.4E-45 5E-50 355.5 19.1 250 169-438 14-265 (328)
30 2psq_A Fibroblast growth facto 100.0 2.7E-45 9.2E-50 359.9 21.2 259 169-443 80-363 (370)
31 3soc_A Activin receptor type-2 100.0 2.3E-45 7.9E-50 353.8 20.0 263 169-443 23-317 (322)
32 3q4u_A Activin receptor type-1 100.0 6E-45 2E-49 347.4 21.4 261 169-442 7-300 (301)
33 3kul_A Ephrin type-A receptor 100.0 2.7E-45 9.1E-50 353.7 19.1 259 170-446 49-315 (325)
34 3sxs_A Cytoplasmic tyrosine-pr 100.0 4.3E-45 1.5E-49 342.5 19.7 257 169-445 7-265 (268)
35 3h4j_B AMPK kdaid, SNF1-like p 100.0 6.4E-45 2.2E-49 351.7 21.0 253 170-442 9-264 (336)
36 3soa_A Calcium/calmodulin-depe 100.0 1.4E-44 4.8E-49 361.9 23.8 256 168-438 9-268 (444)
37 3zgw_A Maternal embryonic leuc 100.0 3.7E-45 1.3E-49 354.8 18.8 253 169-441 9-265 (347)
38 4euu_A Serine/threonine-protei 100.0 1.8E-44 6.3E-49 347.1 23.3 267 170-445 9-310 (319)
39 4hcu_A Tyrosine-protein kinase 100.0 3.9E-45 1.3E-49 343.1 17.7 256 169-444 9-266 (269)
40 3niz_A Rhodanese family protei 100.0 8.9E-45 3.1E-49 347.9 20.3 263 169-438 20-301 (311)
41 3txo_A PKC-L, NPKC-ETA, protei 100.0 2.8E-45 9.4E-50 356.9 16.7 251 169-437 22-280 (353)
42 4dc2_A Protein kinase C IOTA t 100.0 4.4E-45 1.5E-49 359.7 18.3 256 169-437 51-318 (396)
43 3cbl_A C-FES, proto-oncogene t 100.0 1.5E-45 5.2E-50 362.8 14.8 258 169-444 113-374 (377)
44 2yab_A Death-associated protei 100.0 1.6E-44 5.4E-49 352.4 20.7 255 169-438 11-273 (361)
45 3vhe_A Vascular endothelial gr 100.0 3.3E-45 1.1E-49 358.2 15.8 268 161-443 13-354 (359)
46 2qol_A Ephrin receptor; recept 100.0 6.6E-45 2.2E-49 357.4 17.9 257 170-444 45-309 (373)
47 3lb7_A RAF proto-oncogene seri 100.0 4E-44 1.4E-48 342.7 22.9 262 169-445 35-301 (307)
48 1tki_A Titin; serine kinase, m 100.0 1.2E-44 4E-49 348.4 19.2 252 169-438 4-258 (321)
49 3a8x_A Protein kinase C IOTA t 100.0 9.4E-45 3.2E-49 352.3 18.5 255 170-437 9-275 (345)
50 3qd2_B Eukaryotic translation 100.0 1.3E-44 4.5E-49 349.8 18.8 252 169-438 5-326 (332)
51 3tki_A Serine/threonine-protei 100.0 1.2E-44 4.1E-49 348.8 18.2 253 169-438 6-262 (323)
52 1ob3_A PFPK5, cell division co 100.0 1.2E-44 3.9E-49 343.4 17.6 262 170-438 2-281 (288)
53 2zv2_A Calcium/calmodulin-depe 100.0 2.3E-44 7.9E-49 343.0 19.8 252 169-437 12-292 (298)
54 1fot_A TPK1 delta, CAMP-depend 100.0 3.6E-44 1.2E-48 344.3 21.1 249 169-438 5-259 (318)
55 4fr4_A YANK1, serine/threonine 100.0 3.6E-44 1.2E-48 351.9 21.6 252 170-437 15-271 (384)
56 3c0i_A Peripheral plasma membr 100.0 1.2E-44 4.3E-49 352.8 17.6 256 170-437 24-286 (351)
57 3ugc_A Tyrosine-protein kinase 100.0 5.4E-45 1.8E-49 346.8 14.7 264 170-444 10-291 (295)
58 1xjd_A Protein kinase C, theta 100.0 8.7E-45 3E-49 352.1 16.3 251 168-436 15-268 (345)
59 2bdw_A Hypothetical protein K1 100.0 3.3E-44 1.1E-48 351.0 20.4 254 169-438 28-285 (362)
60 3gen_A Tyrosine-protein kinase 100.0 1.7E-44 5.7E-49 341.3 17.6 255 169-443 23-279 (283)
61 2y0a_A Death-associated protei 100.0 2.8E-44 9.5E-49 346.8 19.3 255 169-438 10-272 (326)
62 1luf_A Muscle-specific tyrosin 100.0 1.9E-44 6.5E-49 350.5 18.3 262 168-445 45-336 (343)
63 3o0g_A Cell division protein k 100.0 5.9E-44 2E-48 339.2 20.9 262 170-438 2-283 (292)
64 4aw2_A Serine/threonine-protei 100.0 1.3E-44 4.5E-49 360.8 16.9 265 162-438 66-339 (437)
65 3cok_A Serine/threonine-protei 100.0 3.9E-44 1.3E-48 337.9 19.2 253 169-438 10-263 (278)
66 1csn_A Casein kinase-1; phosph 100.0 3.5E-44 1.2E-48 341.6 19.0 260 170-447 10-286 (298)
67 3tt0_A Basic fibroblast growth 100.0 4.5E-44 1.5E-48 353.0 20.4 259 169-443 68-351 (382)
68 3dtc_A Mitogen-activated prote 100.0 3.4E-44 1.2E-48 336.9 18.6 255 170-441 7-270 (271)
69 3mdy_A Bone morphogenetic prot 100.0 2.1E-43 7.2E-48 342.2 24.5 264 166-445 33-332 (337)
70 2i0e_A Protein kinase C-beta I 100.0 3.5E-44 1.2E-48 348.9 18.9 252 169-438 19-277 (353)
71 1k9a_A Carboxyl-terminal SRC k 100.0 4.7E-44 1.6E-48 360.1 20.4 251 169-443 192-444 (450)
72 2w4o_A Calcium/calmodulin-depe 100.0 5.9E-44 2E-48 347.6 20.3 251 169-438 52-306 (349)
73 3kk8_A Calcium/calmodulin depe 100.0 1.7E-43 5.9E-48 334.5 22.8 261 169-445 5-270 (284)
74 2ivs_A Proto-oncogene tyrosine 100.0 4.6E-44 1.6E-48 343.3 19.1 259 169-443 22-310 (314)
75 3poz_A Epidermal growth factor 100.0 2.3E-44 7.7E-49 347.6 17.0 256 170-444 15-278 (327)
76 1qcf_A Haematopoetic cell kina 100.0 1.1E-44 3.8E-49 365.2 15.5 259 167-445 185-445 (454)
77 1rjb_A FL cytokine receptor; k 100.0 4.4E-44 1.5E-48 348.2 19.1 266 168-448 43-338 (344)
78 2y94_A 5'-AMP-activated protei 100.0 8.3E-44 2.8E-48 358.6 21.4 253 170-441 16-271 (476)
79 1rdq_E PKA C-alpha, CAMP-depen 100.0 5.7E-44 2E-48 347.3 19.5 248 170-438 41-294 (350)
80 2eva_A TAK1 kinase - TAB1 chim 100.0 8.1E-44 2.8E-48 340.7 20.3 255 170-444 8-263 (307)
81 3qup_A Tyrosine-protein kinase 100.0 3.3E-44 1.1E-48 345.9 17.7 265 169-448 22-302 (323)
82 3l9p_A Anaplastic lymphoma kin 100.0 2.7E-44 9.2E-49 352.5 17.1 259 170-444 71-345 (367)
83 1kob_A Twitchin; kinase, intra 100.0 2.1E-43 7.3E-48 347.5 23.4 253 169-438 50-305 (387)
84 3v8s_A RHO-associated protein 100.0 1.7E-44 6E-49 357.3 15.4 259 165-438 64-330 (410)
85 4agu_A Cyclin-dependent kinase 100.0 8.2E-44 2.8E-48 341.3 19.3 262 170-438 3-285 (311)
86 2vd5_A DMPK protein; serine/th 100.0 3.2E-44 1.1E-48 355.6 17.0 263 162-438 53-328 (412)
87 4ejn_A RAC-alpha serine/threon 100.0 2E-44 6.9E-49 362.7 15.7 251 169-437 147-404 (446)
88 3a62_A Ribosomal protein S6 ki 100.0 5.7E-44 1.9E-48 344.7 18.2 252 169-438 16-277 (327)
89 1u5q_A Serine/threonine protei 100.0 9.4E-44 3.2E-48 345.8 19.7 254 170-444 54-312 (348)
90 1t46_A HOMO sapiens V-KIT hard 100.0 7.1E-44 2.4E-48 341.9 18.5 260 169-443 22-306 (313)
91 3p1a_A MYT1 kinase, membrane-a 100.0 1.1E-43 3.8E-48 340.4 19.8 247 170-438 57-305 (311)
92 2wqm_A Serine/threonine-protei 100.0 1.6E-43 5.6E-48 339.0 20.8 264 169-444 31-297 (310)
93 3fdn_A Serine/threonine-protei 100.0 1.1E-43 3.9E-48 334.9 19.4 251 169-439 8-259 (279)
94 3ork_A Serine/threonine protei 100.0 2E-44 6.8E-49 345.6 14.4 262 170-445 12-282 (311)
95 1opk_A P150, C-ABL, proto-onco 100.0 3.2E-44 1.1E-48 365.4 16.7 258 168-444 218-478 (495)
96 3kmu_A ILK, integrin-linked ki 100.0 1.3E-43 4.5E-48 332.7 19.5 254 170-444 10-270 (271)
97 2h34_A Serine/threonine-protei 100.0 2.9E-43 1E-47 337.1 22.2 263 169-446 33-298 (309)
98 4f0f_A Serine/threonine-protei 100.0 4.1E-43 1.4E-47 332.5 23.0 254 170-441 19-286 (287)
99 2rku_A Serine/threonine-protei 100.0 1.7E-43 5.9E-48 336.3 20.4 255 170-442 15-271 (294)
100 2pvf_A Fibroblast growth facto 100.0 6.6E-44 2.2E-48 345.5 17.5 261 169-445 34-319 (334)
101 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 3.7E-44 1.3E-48 361.0 16.4 258 168-445 182-441 (452)
102 3uc3_A Serine/threonine-protei 100.0 1.3E-43 4.5E-48 346.6 19.6 253 169-438 19-275 (361)
103 2i1m_A Macrophage colony-stimu 100.0 3.6E-44 1.2E-48 347.1 15.2 262 167-443 43-325 (333)
104 2izr_A Casein kinase I isoform 100.0 6.6E-44 2.3E-48 344.9 17.0 258 170-443 9-280 (330)
105 3kn6_A Ribosomal protein S6 ki 100.0 5E-44 1.7E-48 344.7 16.1 251 175-438 16-271 (325)
106 1mp8_A Focal adhesion kinase 1 100.0 1.1E-43 3.8E-48 335.3 18.1 256 169-443 14-275 (281)
107 2pmi_A Negative RE, cyclin-dep 100.0 1.5E-43 5.2E-48 340.4 19.3 264 169-438 4-294 (317)
108 2r5t_A Serine/threonine-protei 100.0 5.7E-44 1.9E-48 349.9 16.4 247 169-433 37-285 (373)
109 3kex_A Receptor tyrosine-prote 100.0 5.9E-44 2E-48 344.5 16.3 257 170-445 13-277 (325)
110 2eue_A Carbon catabolite derep 100.0 7.3E-44 2.5E-48 335.5 16.6 248 170-437 13-262 (275)
111 3t9t_A Tyrosine-protein kinase 100.0 7.8E-44 2.7E-48 333.6 16.7 256 169-444 7-264 (267)
112 3op5_A Serine/threonine-protei 100.0 4.6E-44 1.6E-48 350.7 15.6 265 169-445 34-330 (364)
113 3gni_B Strad alpha; kinase fol 100.0 3.7E-43 1.3E-47 347.4 22.1 265 169-438 24-334 (389)
114 2owb_A Serine/threonine-protei 100.0 2.2E-43 7.6E-48 341.9 19.6 256 169-442 40-297 (335)
115 3dbq_A Dual specificity protei 100.0 1.9E-43 6.6E-48 343.5 18.9 252 170-439 9-275 (343)
116 2zmd_A Dual specificity protei 100.0 2E-43 6.8E-48 348.9 19.3 252 170-439 56-322 (390)
117 3og7_A AKAP9-BRAF fusion prote 100.0 2.6E-43 9E-48 334.2 19.2 261 169-444 23-288 (289)
118 3c1x_A Hepatocyte growth facto 100.0 8.6E-44 3E-48 349.1 16.2 266 171-454 90-365 (373)
119 2x4f_A Myosin light chain kina 100.0 3E-43 1E-47 345.4 20.0 248 173-437 92-342 (373)
120 3hko_A Calcium/calmodulin-depe 100.0 2.4E-43 8.1E-48 343.1 19.1 263 165-438 21-331 (345)
121 3gxj_A TGF-beta receptor type- 100.0 6.4E-45 2.2E-49 347.4 7.9 263 170-445 3-298 (303)
122 1p4o_A Insulin-like growth fac 100.0 4.6E-44 1.6E-48 344.7 13.9 265 164-444 19-299 (322)
123 4e5w_A Tyrosine-protein kinase 100.0 1.2E-43 3.9E-48 338.7 16.2 263 170-442 21-300 (302)
124 4fvq_A Tyrosine-protein kinase 100.0 2E-43 7E-48 334.8 17.8 253 170-447 8-278 (289)
125 2v62_A Serine/threonine-protei 100.0 8.5E-44 2.9E-48 346.2 15.5 273 170-453 37-337 (345)
126 3c4z_A Rhodopsin kinase; Ser/T 100.0 4.6E-43 1.6E-47 357.2 21.5 257 170-437 185-448 (543)
127 4eut_A Serine/threonine-protei 100.0 2E-43 6.8E-48 350.0 18.3 269 170-445 9-310 (396)
128 2acx_A G protein-coupled recep 100.0 3.8E-43 1.3E-47 358.7 20.8 257 169-438 183-445 (576)
129 3kfa_A Tyrosine-protein kinase 100.0 7.5E-44 2.6E-48 337.6 14.1 256 168-442 11-269 (288)
130 2a2a_A Death-associated protei 100.0 3.8E-43 1.3E-47 338.3 19.2 255 169-438 11-273 (321)
131 1nxk_A MAP kinase-activated pr 100.0 1.2E-42 4.2E-47 344.2 23.4 251 170-439 61-323 (400)
132 4hgt_A Casein kinase I isoform 100.0 1.8E-43 6E-48 336.3 16.4 263 168-445 7-281 (296)
133 2vgo_A Serine/threonine-protei 100.0 1E-42 3.5E-47 329.2 21.6 253 170-442 14-268 (284)
134 3lxp_A Non-receptor tyrosine-p 100.0 4.2E-43 1.4E-47 337.5 19.1 260 172-443 33-309 (318)
135 3a7i_A MST3 kinase, serine/thr 100.0 7.2E-43 2.5E-47 333.4 20.5 250 170-439 22-272 (303)
136 3mtl_A Cell division protein k 100.0 1.6E-43 5.6E-48 341.2 16.1 260 170-437 2-281 (324)
137 3uzp_A CKI-delta, CKID, casein 100.0 3.4E-43 1.2E-47 334.4 18.0 259 169-445 8-281 (296)
138 1qpc_A LCK kinase; alpha beta 100.0 3.5E-43 1.2E-47 331.5 18.0 255 169-443 12-268 (279)
139 2w5a_A Serine/threonine-protei 100.0 6.6E-44 2.3E-48 336.4 13.0 259 169-442 5-272 (279)
140 3dls_A PAS domain-containing s 100.0 2.8E-43 9.7E-48 340.8 17.6 246 168-438 22-275 (335)
141 2xir_A Vascular endothelial gr 100.0 2.8E-43 9.6E-48 338.2 17.4 268 161-443 18-309 (316)
142 1u59_A Tyrosine-protein kinase 100.0 6.7E-43 2.3E-47 331.0 19.7 255 170-443 9-271 (287)
143 3f66_A Hepatocyte growth facto 100.0 5.7E-43 1.9E-47 333.3 19.1 259 170-446 25-293 (298)
144 3is5_A Calcium-dependent prote 100.0 5.4E-43 1.9E-47 331.3 18.8 252 170-437 22-278 (285)
145 3lxl_A Tyrosine-protein kinase 100.0 2.7E-43 9.4E-48 340.1 17.0 264 170-444 23-303 (327)
146 3pls_A Macrophage-stimulating 100.0 8.9E-43 3E-47 331.9 20.2 263 171-451 22-294 (298)
147 2yex_A Serine/threonine-protei 100.0 1.1E-42 3.9E-47 327.3 20.6 253 169-438 6-262 (276)
148 3g33_A Cell division protein k 100.0 8.1E-43 2.8E-47 333.9 19.8 264 169-438 8-297 (308)
149 3brb_A Proto-oncogene tyrosine 100.0 8E-43 2.7E-47 334.7 19.6 262 168-444 32-308 (313)
150 1mqb_A Ephrin type-A receptor 100.0 8.1E-43 2.8E-47 337.6 19.8 258 170-445 44-310 (333)
151 3f3z_A Calcium/calmodulin-depe 100.0 8.1E-43 2.8E-47 328.7 19.2 250 169-437 8-261 (277)
152 2h6d_A 5'-AMP-activated protei 100.0 6.5E-43 2.2E-47 329.1 18.3 253 170-441 11-266 (276)
153 2y7j_A Phosphorylase B kinase 100.0 1.7E-42 5.8E-47 339.4 21.7 262 162-438 86-360 (365)
154 2qr7_A Ribosomal protein S6 ki 100.0 4.9E-43 1.7E-47 339.8 17.7 251 169-438 21-278 (342)
155 3llt_A Serine/threonine kinase 100.0 3.4E-43 1.2E-47 344.1 16.7 206 161-378 26-262 (360)
156 3bhy_A Death-associated protei 100.0 7E-43 2.4E-47 330.1 18.3 253 170-437 5-265 (283)
157 1b6c_B TGF-B superfamily recep 100.0 2.9E-42 1E-46 334.9 23.0 268 165-445 37-337 (342)
158 3q60_A ROP5B; pseudokinase, tr 100.0 3.2E-43 1.1E-47 345.6 16.2 256 170-437 62-352 (371)
159 2clq_A Mitogen-activated prote 100.0 2.2E-42 7.5E-47 328.7 21.3 253 171-438 23-279 (295)
160 3cc6_A Protein tyrosine kinase 100.0 9.6E-43 3.3E-47 328.9 18.7 255 169-442 11-271 (281)
161 3lzb_A Epidermal growth factor 100.0 4.5E-43 1.5E-47 338.5 16.7 257 170-445 15-279 (327)
162 3gbz_A Kinase, CMGC CDK; ssgci 100.0 5.5E-43 1.9E-47 338.2 17.3 263 168-438 32-319 (329)
163 3i6u_A CDS1, serine/threonine- 100.0 7.1E-43 2.4E-47 348.3 18.5 257 167-438 132-400 (419)
164 1xbb_A Tyrosine-protein kinase 100.0 8.4E-43 2.9E-47 331.1 18.1 255 169-442 15-277 (291)
165 4aaa_A Cyclin-dependent kinase 100.0 3.8E-43 1.3E-47 339.7 16.0 263 169-438 24-307 (331)
166 2h8h_A Proto-oncogene tyrosine 100.0 1.5E-43 5.2E-48 363.6 13.8 258 168-445 265-524 (535)
167 3ttj_A Mitogen-activated prote 100.0 1.5E-42 5.1E-47 349.8 20.6 259 169-438 61-356 (464)
168 2buj_A Serine/threonine-protei 100.0 1.1E-42 3.7E-47 334.4 18.5 266 169-449 28-311 (317)
169 3e7e_A HBUB1, BUB1A, mitotic c 100.0 1.7E-42 5.7E-47 339.8 20.2 251 169-444 64-339 (365)
170 1u46_A ACK-1, activated CDC42 100.0 5.7E-43 2E-47 332.0 16.0 260 170-445 18-285 (291)
171 3lm5_A Serine/threonine-protei 100.0 1.6E-42 5.4E-47 334.8 19.3 266 159-438 17-288 (327)
172 2a19_B Interferon-induced, dou 100.0 1.9E-42 6.4E-47 327.2 19.4 251 169-447 10-277 (284)
173 3nyv_A Calmodulin-domain prote 100.0 6E-43 2E-47 355.8 17.0 253 169-437 25-281 (484)
174 1t4h_A Serine/threonine-protei 100.0 4.9E-42 1.7E-46 325.6 22.2 250 170-438 26-283 (290)
175 3g2f_A Bone morphogenetic prot 100.0 8.1E-43 2.8E-47 338.1 16.9 261 169-444 12-318 (336)
176 2ozo_A Tyrosine-protein kinase 100.0 8.5E-43 2.9E-47 363.1 18.1 253 171-442 336-596 (613)
177 1byg_A CSK, protein (C-termina 100.0 7.5E-43 2.6E-47 329.1 15.9 251 169-443 20-272 (278)
178 1ua2_A CAK, cell division prot 100.0 1.2E-42 4.1E-47 338.2 17.5 266 168-439 8-293 (346)
179 3com_A Serine/threonine-protei 100.0 2.7E-42 9.4E-47 331.1 19.6 252 168-438 27-279 (314)
180 1fvr_A Tyrosine-protein kinase 100.0 1.6E-42 5.4E-47 334.8 17.8 259 170-445 25-301 (327)
181 1x8b_A WEE1HU, WEE1-like prote 100.0 3.1E-42 1.1E-46 326.2 19.5 248 169-438 10-280 (289)
182 3byv_A Rhoptry kinase; malaria 100.0 1.7E-43 5.8E-48 348.3 11.1 245 169-437 72-359 (377)
183 2jii_A Serine/threonine-protei 100.0 3.4E-43 1.2E-47 343.0 13.0 259 170-447 42-339 (352)
184 2r3i_A Cell division protein k 100.0 2.9E-42 1E-46 328.5 19.1 263 170-438 3-284 (299)
185 2jam_A Calcium/calmodulin-depe 100.0 5.3E-42 1.8E-46 327.6 20.9 255 169-442 8-267 (304)
186 3ll6_A Cyclin G-associated kin 100.0 1.9E-42 6.6E-47 335.3 18.0 257 170-447 28-311 (337)
187 2yfx_A Tyrosine-protein kinase 100.0 1.7E-42 5.7E-47 334.6 17.5 260 169-444 29-304 (327)
188 3lij_A Calcium/calmodulin depe 100.0 3.1E-42 1.1E-46 351.1 20.0 253 169-438 36-292 (494)
189 4fl3_A Tyrosine-protein kinase 100.0 1.5E-42 5.2E-47 362.0 18.0 248 176-442 375-629 (635)
190 3pfq_A PKC-B, PKC-beta, protei 100.0 1.9E-42 6.5E-47 363.7 18.8 252 168-437 339-597 (674)
191 3rp9_A Mitogen-activated prote 100.0 2.1E-42 7.2E-47 349.4 18.4 194 170-371 53-280 (458)
192 3mwu_A Calmodulin-domain prote 100.0 3.1E-42 1.1E-46 350.5 19.7 253 169-438 21-277 (486)
193 2x7f_A TRAF2 and NCK-interacti 100.0 1.2E-42 4.3E-47 335.3 15.9 254 166-438 20-287 (326)
194 2w1i_A JAK2; chromosomal rearr 100.0 1.5E-42 5E-47 334.9 16.3 263 170-443 41-321 (326)
195 3n9x_A Phosphotransferase; mal 100.0 3.5E-42 1.2E-46 344.7 19.6 200 169-376 25-253 (432)
196 3eqc_A Dual specificity mitoge 100.0 1.2E-42 4E-47 340.2 15.8 199 170-378 33-233 (360)
197 3oz6_A Mitogen-activated prote 100.0 1.8E-42 6.2E-47 342.3 17.1 203 168-379 7-235 (388)
198 2ac3_A MAP kinase-interacting 100.0 2E-42 6.7E-47 332.4 16.6 259 170-438 12-296 (316)
199 3q5i_A Protein kinase; CDPK, m 100.0 3.9E-42 1.3E-46 351.3 19.5 254 169-438 35-302 (504)
200 3mi9_A Cell division protein k 100.0 4.2E-42 1.4E-46 335.1 18.2 263 169-439 16-313 (351)
201 1phk_A Phosphorylase kinase; g 100.0 1.1E-41 3.7E-46 324.4 20.5 254 169-437 16-283 (298)
202 2j7t_A Serine/threonine-protei 100.0 1.9E-42 6.4E-47 330.3 14.7 253 169-438 18-276 (302)
203 2xrw_A Mitogen-activated prote 100.0 1.4E-41 4.9E-46 333.8 21.3 259 169-438 24-319 (371)
204 1vzo_A Ribosomal protein S6 ki 100.0 1.4E-42 4.8E-47 338.8 13.8 258 169-440 53-324 (355)
205 2ycf_A Serine/threonine-protei 100.0 3.8E-42 1.3E-46 331.4 16.6 254 169-437 9-274 (322)
206 3sv0_A Casein kinase I-like; t 100.0 6.3E-42 2.1E-46 345.6 18.9 260 170-444 7-278 (483)
207 2pml_X PFPK7, Ser/Thr protein 100.0 2.9E-42 1E-46 335.8 15.6 263 169-438 30-323 (348)
208 3pg1_A Mitogen-activated prote 100.0 2.9E-42 9.8E-47 337.8 15.6 270 162-438 14-317 (362)
209 2vwi_A Serine/threonine-protei 100.0 1.5E-42 5.3E-47 330.9 12.7 258 169-438 14-288 (303)
210 2wtk_C Serine/threonine-protei 100.0 3.6E-41 1.2E-45 321.9 22.0 257 169-442 4-269 (305)
211 1cm8_A Phosphorylated MAP kina 100.0 5.8E-42 2E-46 335.8 16.8 258 169-438 24-308 (367)
212 3fme_A Dual specificity mitoge 100.0 5.5E-42 1.9E-46 325.1 16.0 253 169-437 6-266 (290)
213 3nsz_A CK II alpha, casein kin 100.0 4E-41 1.4E-45 325.3 22.3 250 170-438 36-320 (330)
214 3cek_A Dual specificity protei 100.0 2.1E-41 7.3E-46 324.8 19.3 258 167-442 25-298 (313)
215 1zy4_A Serine/threonine-protei 100.0 3E-41 1E-45 321.7 19.7 251 169-438 5-284 (303)
216 2wei_A Calmodulin-domain prote 100.0 4.3E-41 1.5E-45 318.6 19.0 254 168-438 20-277 (287)
217 3qyz_A Mitogen-activated prote 100.0 3.2E-41 1.1E-45 330.5 18.5 259 169-438 26-314 (364)
218 3kvw_A DYRK2, dual specificity 100.0 3.2E-41 1.1E-45 337.2 18.6 199 169-379 96-303 (429)
219 2y4i_B KSR2, HKSR2, kinase sup 100.0 6.1E-42 2.1E-46 329.4 12.5 258 168-445 31-303 (319)
220 2fst_X Mitogen-activated prote 100.0 1.2E-41 4.2E-46 333.2 14.7 258 169-438 28-312 (367)
221 3an0_A Dual specificity mitoge 100.0 1.1E-41 3.9E-46 330.6 14.0 258 169-442 50-316 (340)
222 4e7w_A Glycogen synthase kinas 100.0 2.3E-41 7.8E-46 334.7 16.3 258 170-438 40-322 (394)
223 3fhr_A MAP kinase-activated pr 100.0 7.2E-41 2.5E-45 324.3 19.3 253 169-438 27-288 (336)
224 1wak_A Serine/threonine-protei 100.0 3.4E-41 1.2E-45 334.1 17.5 257 170-438 37-392 (397)
225 1blx_A Cyclin-dependent kinase 100.0 3.7E-41 1.3E-45 324.9 17.2 264 168-438 9-297 (326)
226 3e3p_A Protein kinase, putativ 100.0 1.8E-41 6.3E-46 331.7 15.1 273 163-442 16-320 (360)
227 2b9h_A MAP kinase FUS3, mitoge 100.0 1.7E-40 5.9E-45 323.9 21.8 263 169-441 10-310 (353)
228 3rgf_A Cyclin-dependent kinase 100.0 1.8E-41 6.1E-46 337.1 14.7 200 170-378 20-239 (405)
229 3eb0_A Putative uncharacterize 100.0 1.9E-41 6.6E-46 334.3 14.7 259 167-437 4-321 (383)
230 1z57_A Dual specificity protei 100.0 1.5E-40 5.1E-45 322.1 20.4 257 170-438 14-329 (339)
231 4exu_A Mitogen-activated prote 100.0 3.8E-41 1.3E-45 330.7 16.3 257 169-438 41-324 (371)
232 2j0j_A Focal adhesion kinase 1 100.0 5.1E-41 1.8E-45 351.8 18.1 256 168-442 388-649 (656)
233 1j1b_A Glycogen synthase kinas 100.0 4.1E-41 1.4E-45 335.6 16.1 257 170-438 54-337 (420)
234 2i6l_A Mitogen-activated prote 100.0 7.8E-41 2.7E-45 321.6 17.3 261 170-441 11-310 (320)
235 3aln_A Dual specificity mitoge 100.0 1E-40 3.6E-45 322.0 17.8 255 170-437 22-285 (327)
236 2vx3_A Dual specificity tyrosi 100.0 4.8E-40 1.6E-44 324.2 22.6 200 169-378 53-261 (382)
237 2rio_A Serine/threonine-protei 100.0 9E-41 3.1E-45 334.6 17.6 250 171-437 16-295 (434)
238 3coi_A Mitogen-activated prote 100.0 2.8E-40 9.5E-45 322.5 19.1 259 170-441 24-310 (353)
239 2dyl_A Dual specificity mitoge 100.0 2.4E-40 8.3E-45 318.0 18.2 254 169-438 24-284 (318)
240 3p23_A Serine/threonine-protei 100.0 2.6E-40 8.8E-45 330.5 17.6 247 170-437 24-283 (432)
241 2eu9_A Dual specificity protei 100.0 9.3E-40 3.2E-44 318.7 20.7 198 170-379 19-243 (355)
242 3a99_A Proto-oncogene serine/t 100.0 8.3E-41 2.8E-45 321.7 12.3 244 169-438 42-294 (320)
243 2iwi_A Serine/threonine-protei 100.0 1.8E-40 6.1E-45 318.2 14.5 247 166-438 27-284 (312)
244 1q8y_A SR protein kinase; tran 100.0 2.3E-40 7.8E-45 325.5 14.6 257 170-438 19-334 (373)
245 3uqc_A Probable conserved tran 100.0 4E-39 1.4E-43 304.6 19.3 235 170-445 31-266 (286)
246 3qa8_A MGC80376 protein; kinas 100.0 3.6E-40 1.2E-44 340.0 13.0 257 169-434 13-294 (676)
247 2pzi_A Probable serine/threoni 100.0 6.4E-39 2.2E-43 338.9 18.0 238 170-441 80-325 (681)
248 3m2w_A MAP kinase-activated pr 100.0 2.9E-38 9.9E-43 301.0 20.5 231 170-438 17-257 (299)
249 3dzo_A Rhoptry kinase domain; 100.0 1.3E-38 4.5E-43 316.8 14.4 244 170-437 78-363 (413)
250 2vuw_A Serine/threonine-protei 100.0 3.6E-38 1.2E-42 305.4 6.3 246 169-436 19-329 (336)
251 4azs_A Methyltransferase WBDD; 100.0 8.3E-32 2.8E-36 277.1 7.6 187 178-374 242-437 (569)
252 3en9_A Glycoprotease, O-sialog 99.9 2.1E-28 7E-33 250.4 8.6 187 173-376 339-539 (540)
253 1zar_A RIO2 kinase; serine kin 99.9 1.1E-24 3.9E-29 204.5 8.7 167 163-360 83-274 (282)
254 1zth_A RIO1 serine protein kin 99.8 8.2E-20 2.8E-24 169.3 11.7 141 171-325 48-219 (258)
255 4gyi_A RIO2 kinase; protein ki 99.7 2.7E-17 9.3E-22 158.4 10.1 141 171-325 96-265 (397)
256 3rgz_A Protein brassinosteroid 99.5 4.5E-14 1.6E-18 151.0 8.2 91 2-92 630-723 (768)
257 1w8a_A SLIT protein; signaling 99.4 1.7E-13 5.9E-18 120.7 7.9 93 5-97 30-126 (192)
258 2v70_A SLIT-2, SLIT homolog 2 99.3 2.1E-12 7.2E-17 116.3 9.5 95 2-96 55-152 (220)
259 3g39_A Variable lymphocyte rec 99.3 1.6E-12 5.6E-17 111.9 8.4 86 4-89 30-118 (170)
260 2v70_A SLIT-2, SLIT homolog 2 99.3 1.6E-12 5.5E-17 117.0 8.3 90 1-90 78-170 (220)
261 3tm0_A Aminoglycoside 3'-phosp 99.3 3.7E-12 1.3E-16 117.9 10.6 145 167-323 11-212 (263)
262 2r9u_A Variable lymphocyte rec 99.3 2.1E-12 7.1E-17 111.7 8.3 84 4-88 33-120 (174)
263 3rgz_A Protein brassinosteroid 99.3 1.5E-12 5E-17 139.3 8.5 87 1-87 653-742 (768)
264 2wfh_A SLIT homolog 2 protein 99.3 2.3E-12 7.8E-17 113.5 7.9 92 4-96 31-125 (193)
265 3oja_A Leucine-rich immune mol 99.3 3.6E-13 1.2E-17 136.2 2.7 85 3-87 119-205 (487)
266 1ogq_A PGIP-2, polygalacturona 99.3 1E-12 3.5E-17 125.1 5.4 96 2-97 74-173 (313)
267 2v9t_B SLIT homolog 2 protein 99.3 6.4E-12 2.2E-16 113.1 9.8 88 3-90 55-145 (220)
268 1ogq_A PGIP-2, polygalacturona 99.3 1.4E-12 4.9E-17 124.1 5.7 94 4-97 50-149 (313)
269 2ifg_A High affinity nerve gro 99.3 3.9E-12 1.3E-16 122.9 8.3 86 2-88 29-118 (347)
270 2wfh_A SLIT homolog 2 protein 99.3 9.2E-12 3.1E-16 109.6 9.9 86 2-88 52-141 (193)
271 1w8a_A SLIT protein; signaling 99.3 8.5E-12 2.9E-16 109.8 9.2 89 2-90 52-143 (192)
272 4fcg_A Uncharacterized protein 99.3 7.7E-12 2.6E-16 119.8 8.2 88 3-92 182-272 (328)
273 2o6r_A Variable lymphocyte rec 99.3 9.6E-12 3.3E-16 107.8 7.9 92 3-94 27-121 (177)
274 3e6j_A Variable lymphocyte rec 99.2 2.2E-11 7.7E-16 110.2 9.8 83 4-86 40-125 (229)
275 1nd4_A Aminoglycoside 3'-phosp 99.2 1.9E-11 6.4E-16 112.9 9.4 137 171-324 21-214 (264)
276 4g8a_A TOLL-like receptor 4; l 99.2 1.6E-11 5.3E-16 128.3 8.8 85 3-87 493-581 (635)
277 3e6j_A Variable lymphocyte rec 99.2 2.1E-11 7.2E-16 110.4 8.4 94 2-96 62-158 (229)
278 2v9t_B SLIT homolog 2 protein 99.2 2.9E-11 9.8E-16 108.8 9.1 92 4-96 32-127 (220)
279 3m19_A Variable lymphocyte rec 99.2 4.2E-11 1.4E-15 110.0 9.9 83 5-87 36-121 (251)
280 1dce_A Protein (RAB geranylger 99.2 2E-11 6.8E-16 125.4 8.2 85 2-89 461-549 (567)
281 2o6s_A Variable lymphocyte rec 99.2 4.8E-11 1.7E-15 106.3 9.1 93 2-94 50-145 (208)
282 2o6s_A Variable lymphocyte rec 99.2 6.8E-11 2.3E-15 105.3 9.9 92 3-94 27-121 (208)
283 3m19_A Variable lymphocyte rec 99.2 6.1E-11 2.1E-15 109.0 9.8 92 2-93 57-151 (251)
284 2o6r_A Variable lymphocyte rec 99.2 8.2E-11 2.8E-15 101.9 9.7 87 2-89 50-140 (177)
285 3rfs_A Internalin B, repeat mo 99.2 5.6E-11 1.9E-15 110.6 9.1 94 2-95 107-203 (272)
286 2je0_A Acidic leucine-rich nuc 99.2 3.4E-11 1.2E-15 101.1 6.6 83 3-87 16-102 (149)
287 3rfs_A Internalin B, repeat mo 99.2 8.5E-11 2.9E-15 109.4 9.9 94 1-94 82-178 (272)
288 4eco_A Uncharacterized protein 99.1 1.7E-11 5.7E-16 128.2 4.6 90 1-91 203-322 (636)
289 4fcg_A Uncharacterized protein 99.1 4.1E-11 1.4E-15 114.7 7.0 93 2-96 148-252 (328)
290 4ezg_A Putative uncharacterize 99.1 6.7E-11 2.3E-15 104.4 7.4 84 3-86 87-172 (197)
291 2je0_A Acidic leucine-rich nuc 99.1 4.8E-11 1.6E-15 100.2 6.1 85 2-88 40-128 (149)
292 1p9a_G Platelet glycoprotein I 99.1 1.4E-10 4.7E-15 109.0 9.7 87 2-89 75-164 (290)
293 3dxp_A Putative acyl-COA dehyd 99.1 1.9E-10 6.4E-15 111.6 10.9 142 175-324 43-248 (359)
294 4b8c_D Glucose-repressible alc 99.1 2.8E-11 9.7E-16 128.0 5.0 90 2-95 222-314 (727)
295 2ell_A Acidic leucine-rich nuc 99.1 1.5E-10 5E-15 99.3 8.0 84 2-88 47-135 (168)
296 3v47_A TOLL-like receptor 5B a 99.1 1.2E-10 4.1E-15 116.7 8.5 94 2-95 297-393 (455)
297 3g39_A Variable lymphocyte rec 99.1 1.9E-10 6.5E-15 98.9 8.5 90 5-97 10-102 (170)
298 4ecn_A Leucine-rich repeat pro 99.1 2.8E-11 9.7E-16 129.6 3.9 90 1-91 445-565 (876)
299 2r9u_A Variable lymphocyte rec 99.1 2.3E-10 7.8E-15 98.8 9.0 87 6-96 14-104 (174)
300 2ell_A Acidic leucine-rich nuc 99.1 8.8E-11 3E-15 100.7 6.1 85 2-88 22-110 (168)
301 1p9a_G Platelet glycoprotein I 99.1 2.3E-10 7.7E-15 107.5 9.2 86 2-88 98-187 (290)
302 2z66_A Variable lymphocyte rec 99.1 1.8E-10 6.3E-15 109.0 8.5 95 2-96 148-246 (306)
303 3v47_A TOLL-like receptor 5B a 99.1 2.5E-10 8.4E-15 114.4 9.8 94 3-96 274-370 (455)
304 4g8a_A TOLL-like receptor 4; l 99.1 1.8E-10 6E-15 120.3 8.6 89 5-93 53-144 (635)
305 2xot_A Amphoterin-induced prot 99.1 1.9E-10 6.6E-15 111.6 8.3 85 6-90 41-129 (361)
306 2z66_A Variable lymphocyte rec 99.1 2.4E-10 8.3E-15 108.1 8.7 91 2-92 124-218 (306)
307 2xot_A Amphoterin-induced prot 99.1 1.9E-10 6.4E-15 111.7 7.9 90 2-91 62-154 (361)
308 1ozn_A Reticulon 4 receptor; N 99.0 4.2E-10 1.4E-14 105.4 9.4 92 2-93 78-173 (285)
309 2o6q_A Variable lymphocyte rec 99.0 5.5E-10 1.9E-14 103.7 9.9 91 2-93 83-177 (270)
310 2o6q_A Variable lymphocyte rec 99.0 5.7E-10 1.9E-14 103.6 9.9 92 2-94 59-154 (270)
311 4b8c_D Glucose-repressible alc 99.0 3.2E-10 1.1E-14 120.0 8.4 88 2-92 245-335 (727)
312 1a9n_A U2A', U2A'; complex (nu 99.0 2.5E-10 8.5E-15 98.8 6.3 81 2-87 17-102 (176)
313 3vq2_A TLR4, TOLL-like recepto 99.0 2.9E-10 1E-14 118.2 7.9 91 2-93 446-540 (606)
314 1ozn_A Reticulon 4 receptor; N 99.0 6.8E-10 2.3E-14 103.9 9.6 91 4-94 32-126 (285)
315 4glp_A Monocyte differentiatio 99.0 2.4E-10 8.4E-15 108.4 6.5 84 2-87 195-286 (310)
316 4ezg_A Putative uncharacterize 99.0 3.4E-10 1.2E-14 99.8 6.9 85 1-87 109-195 (197)
317 4eco_A Uncharacterized protein 99.0 1.2E-10 4.1E-15 121.7 4.5 88 2-90 247-347 (636)
318 1dce_A Protein (RAB geranylger 99.0 3.5E-10 1.2E-14 116.1 7.7 88 5-96 442-532 (567)
319 3zyi_A Leucine-rich repeat-con 99.0 4.2E-10 1.4E-14 112.7 8.1 91 2-94 194-287 (452)
320 1wwl_A Monocyte differentiatio 99.0 1.9E-10 6.3E-15 109.3 5.2 86 2-88 93-188 (312)
321 3zyj_A Leucine-rich repeat-con 99.0 4.1E-10 1.4E-14 112.3 8.0 91 2-94 183-276 (440)
322 3j0a_A TOLL-like receptor 5; m 99.0 1.7E-10 5.8E-15 124.7 5.4 87 2-90 478-564 (844)
323 2ifg_A High affinity nerve gro 99.0 6.8E-10 2.3E-14 107.0 8.6 86 7-94 11-101 (347)
324 2z63_A TOLL-like receptor 4, v 99.0 4.9E-10 1.7E-14 115.5 8.1 95 2-96 419-517 (570)
325 2z62_A TOLL-like receptor 4, v 99.0 7E-10 2.4E-14 103.3 8.1 89 5-93 29-120 (276)
326 3oja_B Anopheles plasmodium-re 99.0 7E-10 2.4E-14 115.1 8.9 94 2-96 73-170 (597)
327 3vq2_A TLR4, TOLL-like recepto 99.0 6.8E-10 2.3E-14 115.4 8.6 86 2-87 54-142 (606)
328 2id5_A Lingo-1, leucine rich r 99.0 8.9E-10 3E-14 111.1 9.1 87 5-92 33-123 (477)
329 1wwl_A Monocyte differentiatio 99.0 2.4E-10 8.2E-15 108.5 4.4 89 6-95 65-171 (312)
330 4ecn_A Leucine-rich repeat pro 99.0 3E-10 1E-14 121.7 5.7 87 2-90 489-589 (876)
331 2z62_A TOLL-like receptor 4, v 99.0 6.9E-10 2.4E-14 103.3 7.4 94 2-95 50-147 (276)
332 1a9n_A U2A', U2A'; complex (nu 99.0 6.4E-10 2.2E-14 96.2 6.6 81 4-87 42-127 (176)
333 3sg8_A APH(2'')-ID; antibiotic 99.0 9.2E-10 3.1E-14 104.1 7.9 183 175-375 25-287 (304)
334 2z80_A TOLL-like receptor 2, v 99.0 1.1E-09 3.8E-14 105.8 8.4 84 4-88 52-139 (353)
335 2z7x_B TOLL-like receptor 1, v 99.0 6.9E-10 2.4E-14 113.1 7.3 91 2-92 322-418 (520)
336 3zyi_A Leucine-rich repeat-con 99.0 1.2E-09 4E-14 109.4 8.8 91 4-94 75-168 (452)
337 3oja_A Leucine-rich immune mol 98.9 5.4E-10 1.8E-14 112.9 6.2 88 2-93 142-233 (487)
338 3o6n_A APL1; leucine-rich repe 98.9 1.4E-09 4.7E-14 106.7 8.9 92 2-94 67-162 (390)
339 2z63_A TOLL-like receptor 4, v 98.9 1.3E-09 4.4E-14 112.3 9.0 95 2-96 394-493 (570)
340 1xku_A Decorin; proteoglycan, 98.9 1.8E-09 6E-14 103.4 8.9 88 4-92 192-282 (330)
341 2z7x_B TOLL-like receptor 1, v 98.9 8.6E-10 3E-14 112.4 7.0 91 4-95 21-113 (520)
342 3oja_B Anopheles plasmodium-re 98.9 1.6E-09 5.4E-14 112.4 9.0 88 1-88 96-186 (597)
343 3t6q_A CD180 antigen; protein- 98.9 7.1E-10 2.4E-14 115.3 6.2 91 2-92 447-542 (606)
344 2z81_A CD282 antigen, TOLL-lik 98.9 1.2E-09 3.9E-14 112.2 7.7 61 5-65 27-87 (549)
345 3a79_B TLR6, VLRB.59, TOLL-lik 98.9 1.4E-09 4.7E-14 112.1 8.2 91 2-92 351-447 (562)
346 3zyj_A Leucine-rich repeat-con 98.9 2.3E-09 7.9E-14 106.9 9.4 86 3-90 159-248 (440)
347 2xwt_C Thyrotropin receptor; s 98.9 1.1E-09 3.8E-14 99.6 6.5 83 5-87 32-119 (239)
348 3j0a_A TOLL-like receptor 5; m 98.9 1.2E-09 4.1E-14 118.0 7.6 66 3-68 47-113 (844)
349 3t6q_A CD180 antigen; protein- 98.9 2.3E-09 7.8E-14 111.4 9.3 63 3-65 56-118 (606)
350 4glp_A Monocyte differentiatio 98.9 1E-09 3.5E-14 104.0 6.0 90 3-93 144-244 (310)
351 2id5_A Lingo-1, leucine rich r 98.9 2.2E-09 7.5E-14 108.2 8.5 96 1-96 53-151 (477)
352 2ft3_A Biglycan; proteoglycan, 98.9 2.7E-09 9.1E-14 102.2 8.6 87 4-91 54-141 (332)
353 2z81_A CD282 antigen, TOLL-lik 98.9 1.8E-09 6E-14 110.9 7.9 90 1-90 47-140 (549)
354 3a79_B TLR6, VLRB.59, TOLL-lik 98.9 1.8E-09 6.3E-14 111.1 7.8 83 4-87 52-135 (562)
355 2ft3_A Biglycan; proteoglycan, 98.9 2E-09 7E-14 103.0 7.0 90 4-94 193-285 (332)
356 1ziw_A TOLL-like receptor 3; i 98.9 3E-09 1E-13 112.2 8.5 91 2-92 47-140 (680)
357 1xku_A Decorin; proteoglycan, 98.9 2.6E-09 8.9E-14 102.2 7.1 86 4-90 52-138 (330)
358 2z80_A TOLL-like receptor 2, v 98.9 4E-09 1.4E-13 101.9 8.4 82 2-84 74-160 (353)
359 3o6n_A APL1; leucine-rich repe 98.8 4.9E-09 1.7E-13 102.7 8.6 87 1-88 90-180 (390)
360 3o53_A Protein LRIM1, AGAP0063 98.8 1.6E-09 5.3E-14 103.2 4.7 86 2-91 32-117 (317)
361 3rw6_A Nuclear RNA export fact 98.8 2.6E-09 8.9E-14 97.9 5.5 67 2-70 168-238 (267)
362 2xwt_C Thyrotropin receptor; s 98.8 4E-09 1.4E-13 95.9 6.0 92 2-94 53-152 (239)
363 4fmz_A Internalin; leucine ric 98.8 5.1E-09 1.7E-13 100.8 6.9 85 2-90 241-328 (347)
364 1h6t_A Internalin B; cell adhe 98.8 5.8E-09 2E-13 97.9 7.1 82 2-87 110-192 (291)
365 1xeu_A Internalin C; cellular 98.8 8.5E-09 2.9E-13 95.2 7.8 82 2-88 39-121 (263)
366 3cvr_A Invasion plasmid antige 98.8 8.5E-09 2.9E-13 105.5 8.4 76 3-87 99-174 (571)
367 1ziw_A TOLL-like receptor 3; i 98.8 5.1E-09 1.8E-13 110.3 6.9 87 2-90 502-601 (680)
368 3o53_A Protein LRIM1, AGAP0063 98.8 5.2E-09 1.8E-13 99.5 5.7 83 3-86 119-204 (317)
369 1m9s_A Internalin B; cell inva 98.8 1.2E-08 4E-13 105.4 8.4 83 2-88 107-190 (605)
370 1h6u_A Internalin H; cell adhe 98.8 1.3E-08 4.4E-13 96.3 8.0 82 2-88 105-188 (308)
371 1h6t_A Internalin B; cell adhe 98.7 1.1E-08 3.9E-13 95.8 7.4 79 4-87 46-126 (291)
372 1ds9_A Outer arm dynein; leuci 98.7 3.3E-10 1.1E-14 100.0 -3.3 60 3-65 47-106 (198)
373 1h6u_A Internalin H; cell adhe 98.7 1.4E-08 4.9E-13 96.0 7.7 84 1-89 82-167 (308)
374 3r70_A Aminoglycoside phosphot 98.7 6.1E-08 2.1E-12 92.2 11.8 137 171-325 38-238 (320)
375 1xeu_A Internalin C; cellular 98.7 1.5E-08 5.2E-13 93.5 7.1 80 2-87 61-142 (263)
376 2ca6_A RAN GTPase-activating p 98.7 3E-09 1E-13 104.1 1.6 86 2-87 185-288 (386)
377 1jl5_A Outer protein YOPM; leu 98.7 1.6E-09 5.4E-14 108.4 -0.8 84 2-87 9-105 (454)
378 3cvr_A Invasion plasmid antige 98.7 2.7E-08 9.2E-13 101.7 8.1 74 5-87 60-134 (571)
379 3bz5_A Internalin-J, INLJ; leu 98.7 2.8E-08 9.4E-13 99.4 7.9 74 2-81 189-262 (457)
380 1ds9_A Outer arm dynein; leuci 98.7 1.7E-09 5.7E-14 95.4 -1.0 82 3-87 17-107 (198)
381 1m9s_A Internalin B; cell inva 98.7 3.2E-08 1.1E-12 102.2 8.4 84 2-90 85-170 (605)
382 4fmz_A Internalin; leucine ric 98.6 5.5E-08 1.9E-12 93.5 7.3 86 2-92 219-306 (347)
383 2ast_B S-phase kinase-associat 98.6 1.1E-08 3.7E-13 98.0 2.3 79 4-83 70-152 (336)
384 4gkh_A Aminoglycoside 3'-phosp 98.6 3.4E-07 1.2E-11 84.7 12.4 135 177-324 31-223 (272)
385 1o6v_A Internalin A; bacterial 98.6 5.6E-08 1.9E-12 97.5 7.5 83 2-88 263-346 (466)
386 1o6v_A Internalin A; bacterial 98.6 4.7E-08 1.6E-12 98.1 6.9 84 2-90 285-370 (466)
387 3bz5_A Internalin-J, INLJ; leu 98.6 1.1E-07 3.9E-12 95.0 9.5 80 2-88 168-248 (457)
388 1jl5_A Outer protein YOPM; leu 98.6 8.8E-08 3E-12 95.7 8.4 77 4-87 131-209 (454)
389 4ay9_X Follicle-stimulating ho 98.6 7.1E-08 2.4E-12 93.0 7.0 86 4-90 30-121 (350)
390 3d1u_A Putative fructosamine-3 98.6 3.1E-07 1.1E-11 85.7 10.8 76 174-256 19-97 (288)
391 2ca6_A RAN GTPase-activating p 98.5 1.9E-08 6.5E-13 98.3 2.4 85 4-88 159-259 (386)
392 3g06_A SSPH2 (leucine-rich rep 98.5 1.3E-07 4.4E-12 97.8 8.4 34 52-86 241-274 (622)
393 3g06_A SSPH2 (leucine-rich rep 98.5 1.4E-07 4.7E-12 97.7 7.7 72 5-85 62-133 (622)
394 3tdw_A Gentamicin resistance p 98.5 1E-06 3.5E-11 83.1 12.3 135 176-324 25-224 (306)
395 3goz_A Leucine-rich repeat-con 98.4 4.5E-08 1.5E-12 94.8 2.2 87 3-89 21-125 (362)
396 3goz_A Leucine-rich repeat-con 98.4 8.8E-08 3E-12 92.8 3.8 81 8-88 2-95 (362)
397 3ovc_A Hygromycin-B 4-O-kinase 98.4 2.1E-06 7.2E-11 82.9 11.4 143 174-325 45-244 (362)
398 2ast_B S-phase kinase-associat 98.3 3.1E-07 1.1E-11 87.7 5.4 61 3-63 193-258 (336)
399 3rw6_A Nuclear RNA export fact 98.3 1E-07 3.4E-12 87.4 1.5 80 9-90 148-237 (267)
400 4ay9_X Follicle-stimulating ho 98.3 5.5E-07 1.9E-11 86.7 5.6 84 4-90 154-240 (350)
401 3ats_A Putative uncharacterize 98.2 1.3E-06 4.3E-11 84.3 6.5 83 176-258 26-122 (357)
402 1z7x_W Ribonuclease inhibitor; 98.2 3.8E-07 1.3E-11 91.1 2.1 86 3-88 312-413 (461)
403 1z7x_W Ribonuclease inhibitor; 98.2 4.1E-07 1.4E-11 90.9 1.8 86 2-87 282-384 (461)
404 3un9_A NLR family member X1; l 98.1 6.9E-07 2.4E-11 86.6 1.7 61 5-65 127-196 (372)
405 2q83_A YTAA protein; 2635576, 98.0 3.7E-05 1.3E-09 73.3 11.9 139 177-323 39-251 (346)
406 3sb4_A Hypothetical leucine ri 98.0 1.2E-05 4.1E-10 76.5 7.8 89 3-95 225-319 (329)
407 2olc_A MTR kinase, methylthior 98.0 2E-05 6.9E-10 77.0 9.4 78 175-254 35-120 (397)
408 3jr1_A Putative fructosamine-3 98.0 7.4E-05 2.5E-09 70.2 12.6 138 175-320 41-232 (312)
409 3un9_A NLR family member X1; l 97.8 3.2E-06 1.1E-10 81.9 1.2 85 3-87 100-197 (372)
410 3f7w_A Putative fructosamine-3 97.8 5.7E-05 1.9E-09 70.3 9.0 79 171-256 16-97 (288)
411 3ogk_B Coronatine-insensitive 97.8 3.8E-06 1.3E-10 86.7 0.8 84 3-86 435-526 (592)
412 1io0_A Tropomodulin; LRR prote 97.7 8.6E-06 3E-10 70.5 1.8 86 2-87 34-137 (185)
413 1io0_A Tropomodulin; LRR prote 97.7 1.3E-05 4.3E-10 69.5 1.9 84 2-85 63-163 (185)
414 3rfe_A Platelet glycoprotein I 97.7 5.5E-05 1.9E-09 61.1 5.6 57 7-65 11-68 (130)
415 3ogk_B Coronatine-insensitive 97.6 2.2E-05 7.6E-10 80.9 3.6 80 2-82 162-252 (592)
416 2pyw_A Uncharacterized protein 97.6 0.00029 9.8E-09 69.4 11.3 78 293-372 231-313 (420)
417 2p1m_B Transport inhibitor res 97.6 1E-05 3.4E-10 83.5 -0.3 83 2-85 395-493 (594)
418 3sb4_A Hypothetical leucine ri 97.5 9.1E-05 3.1E-09 70.3 6.0 73 2-78 248-323 (329)
419 2p1m_B Transport inhibitor res 97.5 2.1E-05 7.3E-10 81.0 1.1 82 3-84 104-195 (594)
420 2ppq_A HSK, HK, homoserine kin 97.4 0.00048 1.6E-08 65.0 9.7 158 160-323 7-216 (322)
421 2ra8_A Uncharacterized protein 97.4 2.7E-05 9.3E-10 74.8 0.8 86 2-87 217-321 (362)
422 3csv_A Aminoglycoside phosphot 97.4 0.00073 2.5E-08 64.1 10.3 141 177-325 25-218 (333)
423 1zyl_A Hypothetical protein YI 97.3 0.0027 9.1E-08 59.9 13.7 158 160-324 11-223 (328)
424 1nw1_A Choline kinase (49.2 KD 97.3 0.00059 2E-08 67.2 8.5 72 176-256 79-159 (429)
425 3feg_A Choline/ethanolamine ki 97.2 0.001 3.5E-08 64.2 9.5 141 176-324 56-254 (379)
426 2ra8_A Uncharacterized protein 97.2 0.00017 5.7E-09 69.3 3.1 85 3-87 192-293 (362)
427 3dxq_A Choline/ethanolamine ki 97.1 0.0012 4.2E-08 61.5 8.5 71 175-256 23-95 (301)
428 2yle_A Protein spire homolog 1 97.0 0.0062 2.1E-07 53.0 10.8 102 255-374 34-135 (229)
429 4fdw_A Leucine rich hypothetic 96.9 0.0023 7.7E-08 62.4 8.4 83 2-87 269-359 (401)
430 3c5i_A Choline kinase; choline 96.9 0.0016 5.4E-08 62.8 7.0 73 176-256 39-121 (369)
431 2qg7_A Ethanolamine kinase PV0 96.8 0.0048 1.7E-07 61.0 9.7 73 176-256 114-188 (458)
432 3e4g_A ATP synthase subunit S, 96.7 0.0005 1.7E-08 58.3 2.1 78 5-83 62-149 (176)
433 3i1a_A Spectinomycin phosphotr 96.7 0.0072 2.5E-07 57.4 9.9 32 293-324 205-236 (339)
434 3rfe_A Platelet glycoprotein I 96.6 0.0019 6.7E-08 51.9 4.4 36 5-41 32-68 (130)
435 3f2s_A CK, chetk-alpha, cholin 96.3 0.015 5.2E-07 56.2 9.5 144 176-323 58-279 (401)
436 3e4g_A ATP synthase subunit S, 95.9 0.0018 6.2E-08 54.8 0.8 62 2-63 83-150 (176)
437 1pgv_A TMD-1, tropomodulin TMD 95.5 0.0045 1.5E-07 53.4 1.9 81 3-83 40-136 (197)
438 4fdw_A Leucine rich hypothetic 95.5 0.017 5.9E-07 56.1 6.2 64 2-70 298-362 (401)
439 3mes_A Choline kinase; malaria 95.2 0.032 1.1E-06 54.4 6.9 73 176-256 76-157 (424)
440 4gt6_A Cell surface protein; l 94.8 0.038 1.3E-06 53.5 6.4 78 2-84 286-368 (394)
441 4fs7_A Uncharacterized protein 94.7 0.035 1.2E-06 53.7 5.8 75 2-81 295-374 (394)
442 4h09_A Hypothetical leucine ri 94.6 0.054 1.8E-06 52.0 6.7 72 2-77 261-334 (379)
443 1pgv_A TMD-1, tropomodulin TMD 94.5 0.019 6.5E-07 49.5 3.0 60 4-63 70-137 (197)
444 4fs7_A Uncharacterized protein 94.3 0.064 2.2E-06 51.9 6.7 70 2-77 274-344 (394)
445 4h09_A Hypothetical leucine ri 93.7 0.1 3.5E-06 50.0 6.6 72 2-76 238-310 (379)
446 4gt6_A Cell surface protein; l 93.3 0.15 5.2E-06 49.1 7.2 72 2-77 263-335 (394)
447 4ann_A ESSB; membrane protein, 93.1 0.3 1E-05 42.3 7.9 117 227-377 43-159 (215)
448 3g15_A CK, chetk-alpha, cholin 92.5 0.3 1E-05 47.3 8.0 30 295-324 245-280 (401)
449 4ano_A ESSB; membrane protein, 90.9 0.77 2.6E-05 39.9 7.9 115 227-377 48-164 (219)
450 3cxl_A N-chimerin; SH2, RHO-GA 83.8 0.11 3.9E-06 51.3 -2.0 62 174-239 146-214 (463)
451 2ks1_B Epidermal growth factor 83.6 1.3 4.4E-05 27.5 3.5 21 111-131 17-37 (44)
452 2l2t_A Receptor tyrosine-prote 81.2 1.6 5.5E-05 27.0 3.2 7 126-132 32-38 (44)
453 2jwa_A Receptor tyrosine-prote 75.8 2.3 8E-05 26.2 2.8 10 125-134 32-41 (44)
454 2k1k_A Ephrin type-A receptor 68.1 3.8 0.00013 24.5 2.4 9 108-116 13-21 (38)
455 2lz0_A Uncharacterized protein 59.0 9.3 0.00032 28.4 3.8 50 13-63 5-54 (100)
456 3ls8_A Phosphatidylinositol 3- 45.8 2.5E+02 0.0085 28.3 13.0 45 271-322 454-500 (614)
457 2lz0_A Uncharacterized protein 35.0 55 0.0019 24.1 4.7 37 2-39 18-54 (100)
458 1cja_A Protein (actin-fragmin 34.8 1.2E+02 0.0043 27.9 7.8 132 180-324 78-237 (342)
459 2klu_A T-cell surface glycopro 29.6 62 0.0021 21.7 3.5 6 112-117 13-18 (70)
460 1zza_A Stannin, AG8_1; helix, 23.8 1E+02 0.0035 20.9 3.9 12 117-128 26-37 (90)
461 2x6h_A GH13170P, VPS34, phosph 20.3 53 0.0018 33.7 2.9 44 273-323 530-575 (696)
No 1
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=1.9e-57 Score=435.71 Aligned_cols=260 Identities=26% Similarity=0.434 Sum_probs=205.9
Q ss_pred hCccccceeeeeCCceEEEEEcC------CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLP------SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKC 243 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 243 (468)
++|.+.+.||+|+||+||+|++. +++.||||+++..... ..++|.+|++++++++|||||+++|+|.+.+.
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~---~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~ 117 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASES---ARQDFQREAELLTMLQHQHIVRFFGVCTEGRP 117 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHH---HHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHH---HHHHHHHHHHHHHhCCCCCCCcEEEEEEECCE
Confidence 56788899999999999999864 4788999999865433 45789999999999999999999999999999
Q ss_pred EEEEEEeccCCChhhhhhcCcc------------cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCC
Q 012219 244 MFLIYEYMEMGSLFCVLRTDEE------------AVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSE 311 (468)
Q Consensus 244 ~~lv~e~~~~gsL~~~l~~~~~------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~ 311 (468)
.+||||||++|+|.++++.... ..+++|.+++.|+.|||.||+||| +.+|+||||||+|||++++
T Consensus 118 ~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLKp~NILl~~~ 194 (329)
T 4aoj_A 118 LLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLA---GLHFVHRDLATRNCLVGQG 194 (329)
T ss_dssp EEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETT
T ss_pred EEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecccccHhhEEECCC
Confidence 9999999999999999976432 235899999999999999999999 7799999999999999999
Q ss_pred CCeEEeeccccccccCCCC--CceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcc
Q 012219 312 LEAFVADFGVARLLNFDSS--NRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKN 388 (468)
Q Consensus 312 ~~~kl~Dfg~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~ 388 (468)
+.+||+|||+++....... ......||+.|||||++.+..++.++|||||||++|||+| |+.||......... .
T Consensus 195 ~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~-~-- 271 (329)
T 4aoj_A 195 LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAI-D-- 271 (329)
T ss_dssp TEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHH-H--
T ss_pred CcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHH-H--
Confidence 9999999999987643322 2234579999999999999999999999999999999999 99999865432211 1
Q ss_pred cccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCCCC
Q 012219 389 IKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNKAP 446 (468)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~~~ 446 (468)
.+.+...+..+...+ + .+.+++.+||+.||++||||+||++.|+.+.+.|
T Consensus 272 -~i~~g~~~~~p~~~~----~---~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~p 321 (329)
T 4aoj_A 272 -CITQGRELERPRACP----P---EVYAIMRGCWQREPQQRHSIKDVHARLQALAQAP 321 (329)
T ss_dssp -HHHHTCCCCCCTTCC----H---HHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHSC
T ss_pred -HHHcCCCCCCccccc----H---HHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhCC
Confidence 011111111222222 2 2677999999999999999999999999886654
No 2
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=7.7e-58 Score=432.47 Aligned_cols=258 Identities=25% Similarity=0.413 Sum_probs=208.8
Q ss_pred hCccccceeeeeCCceEEEEEcC------CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLP------SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKC 243 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 243 (468)
++|.+.+.||+|+||+||+|++. ++..||||+++..... ..++|.+|++++++++|||||+++|+|.+++.
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~---~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~ 89 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDN---ARKDFHREAELLTNLQHEHIVKFYGVCVEGDP 89 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHH---HHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChH---HHHHHHHHHHHHHhCCCCCCccEEEEEeeCCE
Confidence 56888999999999999999753 4788999999865433 35789999999999999999999999999999
Q ss_pred EEEEEEeccCCChhhhhhcCc----------ccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCC
Q 012219 244 MFLIYEYMEMGSLFCVLRTDE----------EAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELE 313 (468)
Q Consensus 244 ~~lv~e~~~~gsL~~~l~~~~----------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~ 313 (468)
.++|||||++|+|.++++... ....++|.+++.++.|||.||+||| +++|+||||||+|||++.++.
T Consensus 90 ~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDlKp~NILl~~~~~ 166 (299)
T 4asz_A 90 LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGENLL 166 (299)
T ss_dssp EEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGC
T ss_pred EEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCccCHhhEEECCCCc
Confidence 999999999999999997642 2346999999999999999999999 779999999999999999999
Q ss_pred eEEeeccccccccCCCCCc--eeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccc
Q 012219 314 AFVADFGVARLLNFDSSNR--TLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIK 390 (468)
Q Consensus 314 ~kl~Dfg~~~~~~~~~~~~--~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~ 390 (468)
+||+|||+|+......... ....||+.|||||++.+..++.++|||||||++|||+| |+.||...........
T Consensus 167 ~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~---- 242 (299)
T 4asz_A 167 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIEC---- 242 (299)
T ss_dssp EEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHH----
T ss_pred EEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH----
Confidence 9999999998764332221 22468999999999999999999999999999999999 9999986543211110
Q ss_pred cccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCC
Q 012219 391 LIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNK 444 (468)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~ 444 (468)
+.....+..+...+ + .+.+++.+||+.||++||||++|...|++..+
T Consensus 243 i~~~~~~~~p~~~~----~---~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~ 289 (299)
T 4asz_A 243 ITQGRVLQRPRTCP----Q---EVYELMLGCWQREPHMRKNIKGIHTLLQNLAK 289 (299)
T ss_dssp HHHTCCCCCCTTCC----H---HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHcCCCCCCCccch----H---HHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 00100111111121 2 26789999999999999999999999987654
No 3
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=7.1e-57 Score=425.91 Aligned_cols=261 Identities=23% Similarity=0.398 Sum_probs=203.0
Q ss_pred hhCccccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
.+++.+.+.||+|+||+||+|++++ .||||+++...... ...+.|.+|++++++++|||||+++|+|.+ +..+|||
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~-~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVm 110 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTP-EQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVT 110 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCH-HHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEE
Confidence 3578889999999999999999754 59999997554332 346789999999999999999999999865 4579999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
|||++|+|.++++.... .++|.+++.|+.|||.||+||| +.+||||||||+|||+++++.+||+|||+|+.....
T Consensus 111 Ey~~gGsL~~~l~~~~~--~l~~~~~~~i~~qia~gL~yLH---~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~ 185 (307)
T 3omv_A 111 QWCEGSSLYKHLHVQET--KFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRW 185 (307)
T ss_dssp ECCSSCBHHHHHHTSCC--CCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCSSSEEEETTEEEEECCCSSCBC----
T ss_pred EcCCCCCHHHHHhhcCC--CCCHHHHHHHHHHHHHHHHHHH---HCCccCCccCHHHEEECCCCcEEEeeccCceecccC
Confidence 99999999999976433 4899999999999999999999 779999999999999999999999999999876432
Q ss_pred C--CCceeccccccccccccccC---CCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCcc
Q 012219 329 S--SNRTLLAGTYGYIAPELAYT---MVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPV 403 (468)
Q Consensus 329 ~--~~~~~~~g~~~y~aPE~~~~---~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (468)
. .......||+.|||||++.. ..|+.++|||||||++|||+||+.||.............. .....|.+....
T Consensus 186 ~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~--~~~~~p~~~~~~ 263 (307)
T 3omv_A 186 SGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVG--RGYASPDLSKLY 263 (307)
T ss_dssp --------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHH--TTCCCCCSTTSC
T ss_pred CcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHh--cCCCCCCccccc
Confidence 2 22344689999999999864 4689999999999999999999999976543221111100 111122211111
Q ss_pred chhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCC
Q 012219 404 DQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNK 444 (468)
Q Consensus 404 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~ 444 (468)
. .. ...+.+++.+||+.||++||||.+|++.|+....
T Consensus 264 ~-~~---~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~ 300 (307)
T 3omv_A 264 K-NC---PKAMKRLVADCVKKVKEERPLFPQILSSIELLQH 300 (307)
T ss_dssp T-TS---CHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHT
T ss_pred c-cc---hHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhc
Confidence 1 11 1226779999999999999999999999887643
No 4
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=2e-57 Score=431.51 Aligned_cols=257 Identities=23% Similarity=0.320 Sum_probs=207.4
Q ss_pred hCccccceeeeeCCceEEEEEcC------CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLP------SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKC 243 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 243 (468)
.++.+.+.||+|+||+||+|.+. +++.||||+++..... ...++|.+|+.++++++|||||+++|+|.+++.
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~--~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~ 103 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEG--PLREEFRHEAMLRARLQHPNVVCLLGVVTKDQP 103 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC---CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccCh--HHHHHHHHHHHHHHhCCCCCCCCcceEEEECCE
Confidence 45677889999999999999863 4678999999755432 345789999999999999999999999999999
Q ss_pred EEEEEEeccCCChhhhhhcCcc-------------cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCC
Q 012219 244 MFLIYEYMEMGSLFCVLRTDEE-------------AVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNS 310 (468)
Q Consensus 244 ~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~ 310 (468)
.++|||||++|+|.++|..... ...++|.+++.|+.|||.||+||| +.+||||||||+|||+++
T Consensus 104 ~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLK~~NILl~~ 180 (308)
T 4gt4_A 104 LSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLS---SHHVVHKDLATRNVLVYD 180 (308)
T ss_dssp CEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECG
T ss_pred EEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCccccceEECC
Confidence 9999999999999999965321 235899999999999999999999 779999999999999999
Q ss_pred CCCeEEeeccccccccCCC--CCceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhc
Q 012219 311 ELEAFVADFGVARLLNFDS--SNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDK 387 (468)
Q Consensus 311 ~~~~kl~Dfg~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~ 387 (468)
++.+||+|||+++...... .......||+.|||||++.+..++.++|||||||++|||+| |+.||...........
T Consensus 181 ~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~~- 259 (308)
T 4gt4_A 181 KLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEM- 259 (308)
T ss_dssp GGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHH-
T ss_pred CCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHHH-
Confidence 9999999999998764322 22334579999999999999999999999999999999999 8999986543211110
Q ss_pred ccccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhc
Q 012219 388 NIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIAR 442 (468)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~ 442 (468)
+.....+..+...+ ..+.+++.+||+.||++||||.+|++.|+..
T Consensus 260 ---i~~~~~~~~p~~~~-------~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 260 ---IRNRQVLPCPDDCP-------AWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp ---HHTTCCCCCCTTCC-------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred ---HHcCCCCCCcccch-------HHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 00000011111111 2267899999999999999999999999864
No 5
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=2.7e-56 Score=427.82 Aligned_cols=253 Identities=24% Similarity=0.371 Sum_probs=202.1
Q ss_pred hCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
++|.+.+.||+|+||+||+|+. .+|+.||||++....... ...+.|.+|++++++++|||||++++++.+++..|+||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~-~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVm 102 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSS-KEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVM 102 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCH-HHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCH-HHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence 6899999999999999999975 579999999998654432 34578999999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
|||+||+|.+++...+ ...+++.+++.++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+|+.+...
T Consensus 103 Ey~~gg~L~~~i~~~~-~~~~~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 178 (350)
T 4b9d_A 103 DYCEGGDLFKRINAQK-GVLFQEDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST 178 (350)
T ss_dssp ECCTTCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHH---HTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHH
T ss_pred eCCCCCcHHHHHHHcC-CCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHHHEEECCCCCEEEcccccceeecCC
Confidence 9999999999997543 234789999999999999999999 789999999999999999999999999999876433
Q ss_pred CCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHH
Q 012219 329 SSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIR 408 (468)
Q Consensus 329 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (468)
.......+||+.|||||++.+..|+.++|||||||++|||+||+.||........... +...--+......+
T Consensus 179 ~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~----i~~~~~~~~~~~~s---- 250 (350)
T 4b9d_A 179 VELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLK----IISGSFPPVSLHYS---- 250 (350)
T ss_dssp HHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH----HHHTCCCCCCTTSC----
T ss_pred cccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHH----HHcCCCCCCCccCC----
Confidence 2233456799999999999999999999999999999999999999975432211110 00000111122122
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 409 QDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 409 ~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
. .+.+++.+||+.||++|||++|++++
T Consensus 251 ~---~~~~li~~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 251 Y---DLRSLVSQLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp H---HHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred H---HHHHHHHHHccCChhHCcCHHHHhcC
Confidence 2 26679999999999999999999853
No 6
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=4.3e-55 Score=418.78 Aligned_cols=253 Identities=26% Similarity=0.380 Sum_probs=209.3
Q ss_pred hCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
+.|+..+.||+|+||+||+|+. .+|+.||||++...... ..+.+.+|++++++++|||||++++++.+++..||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~---~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivm 150 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ---RRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM 150 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCS---SGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchh---HHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 4688899999999999999975 57999999999754433 2346789999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
|||++|+|.+++... .+++.++..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+|+.+...
T Consensus 151 Ey~~gg~L~~~l~~~----~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 223 (346)
T 4fih_A 151 EFLEGGALTDIVTHT----RMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE 223 (346)
T ss_dssp CCCTTEEHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSS
T ss_pred eCCCCCcHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEECCCCCEEEecCcCceecCCC
Confidence 999999999999753 3899999999999999999999 779999999999999999999999999999987665
Q ss_pred CCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHH
Q 012219 329 SSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIR 408 (468)
Q Consensus 329 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (468)
.......+||+.|||||++.+..|+.++|||||||++|||++|+.||......... ..+.+...+.+.. ...+.
T Consensus 224 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~----~~i~~~~~~~~~~--~~~~s 297 (346)
T 4fih_A 224 VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM----KMIRDNLPPRLKN--LHKVS 297 (346)
T ss_dssp SCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH----HHHHHSSCCCCSC--GGGSC
T ss_pred CCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHH----HHHHcCCCCCCCc--cccCC
Confidence 55566778999999999999999999999999999999999999999754322111 1111111122211 11111
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCHHHHHHH-HHh
Q 012219 409 QDIILVSTVAFSCLRSQPKSRPTMQLVSNE-FIA 441 (468)
Q Consensus 409 ~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~-l~~ 441 (468)
. .+.+++.+||+.||++|||++|++++ |..
T Consensus 298 ~---~~~dli~~~L~~dP~~R~ta~e~l~Hp~~~ 328 (346)
T 4fih_A 298 P---SLKGFLDRLLVRDPAQRATAAELLKHPFLA 328 (346)
T ss_dssp H---HHHHHHHHHSCSSTTTSCCHHHHTTCGGGG
T ss_pred H---HHHHHHHHHcCCChhHCcCHHHHhcCHhhc
Confidence 2 26679999999999999999999864 444
No 7
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=2.7e-55 Score=414.07 Aligned_cols=249 Identities=23% Similarity=0.346 Sum_probs=207.9
Q ss_pred hCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
++|++.+.||+|+||+||+|+. .+|+.||||++...........+.+.+|++++++++|||||++++++.+++..++||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 5799999999999999999974 579999999998765544455678999999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||++||+|.+++...+ .+++.++..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+|+.+...
T Consensus 112 Ey~~gG~L~~~i~~~~---~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~ 185 (311)
T 4aw0_A 112 SYAKNGELLKYIRKIG---SFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 185 (311)
T ss_dssp CCCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred ecCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCC
Confidence 9999999999997643 3899999999999999999999 789999999999999999999999999999987533
Q ss_pred C--CCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchh
Q 012219 329 S--SNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQK 406 (468)
Q Consensus 329 ~--~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (468)
. ......+||+.|||||++.+..|+.++||||+||++|||+||+.||........ ...... .+..++...+
T Consensus 186 ~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~-~~~i~~----~~~~~p~~~s-- 258 (311)
T 4aw0_A 186 SKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLI-FAKIIK----LEYDFPEKFF-- 258 (311)
T ss_dssp TTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHH----TCCCCCTTCC--
T ss_pred CCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHc----CCCCCCcccC--
Confidence 2 234456899999999999999999999999999999999999999975432111 111000 1112222222
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCCHHHHH
Q 012219 407 IRQDIILVSTVAFSCLRSQPKSRPTMQLVS 436 (468)
Q Consensus 407 ~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~ 436 (468)
. .+.+++.+||+.||++|||++|+.
T Consensus 259 --~---~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 259 --P---KARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp --H---HHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred --H---HHHHHHHHHccCCHhHCcChHHHc
Confidence 2 256799999999999999998864
No 8
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2e-54 Score=411.66 Aligned_cols=264 Identities=21% Similarity=0.314 Sum_probs=199.5
Q ss_pred hCccccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCC----EEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRK----CMF 245 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----~~~ 245 (468)
++|.+.+.||+|+||+||+|++ +|+.||||++...... ...+..|+..+.+++|||||+++|+|.+++ ..+
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~~----~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~ 77 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREER----SWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 77 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGHH----HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccchh----hHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEE
Confidence 4678889999999999999998 5899999999754322 122335666677899999999999998653 589
Q ss_pred EEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhc-----CCCCeEecCCCCCceeeCCCCCeEEeecc
Q 012219 246 LIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHD-----CTPPIVHRDISSNNVLLNSELEAFVADFG 320 (468)
Q Consensus 246 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-----~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 320 (468)
||||||++|+|.++++.. .++|..+++++.|+|.||+|||++ +.++|+||||||+|||++.++++||+|||
T Consensus 78 lV~Ey~~~gsL~~~l~~~----~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFG 153 (303)
T 3hmm_A 78 LVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG 153 (303)
T ss_dssp EEEECCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCT
T ss_pred EEecCCCCCcHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCC
Confidence 999999999999999754 389999999999999999999953 13499999999999999999999999999
Q ss_pred ccccccCCCCC----ceeccccccccccccccCC------CCCccchhhHHHHHHHHHHhCCCCCCcccccchhhh----
Q 012219 321 VARLLNFDSSN----RTLLAGTYGYIAPELAYTM------VVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLD---- 386 (468)
Q Consensus 321 ~~~~~~~~~~~----~~~~~g~~~y~aPE~~~~~------~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~---- 386 (468)
+|+........ ....+||+.|||||++.+. .++.++|||||||++|||+||+.|+...........
T Consensus 154 la~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~ 233 (303)
T 3hmm_A 154 LAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVP 233 (303)
T ss_dssp TCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSC
T ss_pred CCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhccc
Confidence 99876543221 2235799999999998754 478899999999999999999887653322111100
Q ss_pred ------c--ccccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCC
Q 012219 387 ------K--NIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNK 444 (468)
Q Consensus 387 ------~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~ 444 (468)
. ........+|.++.... ..+....+.+++.+||+.||++||||.+|++.|+++.+
T Consensus 234 ~~~~~~~~~~~~~~~~~rp~~p~~~~--~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~ 297 (303)
T 3hmm_A 234 SDPSVEEMRKVVCEQKLRPNIPNRWQ--SCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 297 (303)
T ss_dssp SSCCHHHHHHHHTTSCCCCCCCGGGG--SSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHhcccCCCCCCcccc--chHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHH
Confidence 0 00011122222222111 11334457889999999999999999999999987643
No 9
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=3.7e-54 Score=404.37 Aligned_cols=247 Identities=24% Similarity=0.384 Sum_probs=196.1
Q ss_pred cccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEee----CCEEEEE
Q 012219 173 HIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLH----RKCMFLI 247 (468)
Q Consensus 173 ~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~lv 247 (468)
.+.+.||+|+||+||+|.. .++..||+|++....... ...+.|.+|++++++++|||||++++++.. +...++|
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~-~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lv 107 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTK-SERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 107 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCH-HHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCH-HHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEE
Confidence 5667899999999999975 568999999997654332 345789999999999999999999999865 3558999
Q ss_pred EEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEecCCCCCceeeCC-CCCeEEeecccccc
Q 012219 248 YEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPP--IVHRDISSNNVLLNS-ELEAFVADFGVARL 324 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~--ivH~dlk~~NIll~~-~~~~kl~Dfg~~~~ 324 (468)
||||++|+|.+++.... .+++..+..++.||+.||+||| +.+ |+||||||+|||++. ++.+||+|||+|+.
T Consensus 108 mEy~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~ylH---~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~ 181 (290)
T 3fpq_A 108 TELMTSGTLKTYLKRFK---VMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL 181 (290)
T ss_dssp EECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred EeCCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCCCEEecccChhheeEECCCCCEEEEeCcCCEe
Confidence 99999999999997643 4899999999999999999999 555 999999999999985 79999999999986
Q ss_pred ccCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccc
Q 012219 325 LNFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVD 404 (468)
Q Consensus 325 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (468)
.. .......+||+.|||||++.+ .|+.++|||||||++|||+||+.||............ +.... .+....
T Consensus 182 ~~--~~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~---i~~~~---~~~~~~ 252 (290)
T 3fpq_A 182 KR--ASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRR---VTSGV---KPASFD 252 (290)
T ss_dssp CC--TTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHH---HTTTC---CCGGGG
T ss_pred CC--CCccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHH---HHcCC---CCCCCC
Confidence 43 334456789999999998865 6999999999999999999999999754332111111 00000 011111
Q ss_pred hhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 405 QKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 405 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
..... .+.+++.+||+.||++|||++|++++
T Consensus 253 ~~~~~---~~~~li~~~L~~dP~~R~s~~e~l~H 283 (290)
T 3fpq_A 253 KVAIP---EVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp GCCCH---HHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ccCCH---HHHHHHHHHccCChhHCcCHHHHhcC
Confidence 11111 26679999999999999999999864
No 10
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=3.3e-54 Score=411.47 Aligned_cols=250 Identities=24% Similarity=0.281 Sum_probs=201.2
Q ss_pred hCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
+.|.+.+.||+|+||+||+|+. .+|+.||||+++.... +.+|++++++++|||||++++++.+++..+|||
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~--------~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivm 129 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF--------RVEELVACAGLSSPRIVPLYGAVREGPWVNIFM 129 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC--------CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh--------HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 5688889999999999999975 5699999999976432 237999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCC-CeEEeeccccccccC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSEL-EAFVADFGVARLLNF 327 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~-~~kl~Dfg~~~~~~~ 327 (468)
|||+||+|.++++..+ .+++.++..++.||+.||+||| +.+|+||||||+|||++.++ .+||+|||+|+.+..
T Consensus 130 Ey~~gg~L~~~l~~~~---~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~ 203 (336)
T 4g3f_A 130 ELLEGGSLGQLIKQMG---CLPEDRALYYLGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQP 203 (336)
T ss_dssp CCCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC--
T ss_pred eccCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccC
Confidence 9999999999997643 3899999999999999999999 88999999999999999997 699999999988754
Q ss_pred CCCC-----ceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCc
Q 012219 328 DSSN-----RTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPP 402 (468)
Q Consensus 328 ~~~~-----~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (468)
.... ....+||+.|||||++.+..|+.++|||||||++|||+||+.||...........-... ......+.+.
T Consensus 204 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~--~~~~~~~~~~ 281 (336)
T 4g3f_A 204 DGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASE--PPPIREIPPS 281 (336)
T ss_dssp ----------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHS--CCGGGGSCTT
T ss_pred CCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcC--CCCchhcCcc
Confidence 3221 22357999999999999999999999999999999999999999754332111100000 0000011222
Q ss_pred cchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhc
Q 012219 403 VDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIAR 442 (468)
Q Consensus 403 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~ 442 (468)
.+. .+.+++.+||+.||++|||+.|+++++...
T Consensus 282 ~s~-------~~~~li~~~L~~dP~~R~sa~el~~~l~~~ 314 (336)
T 4g3f_A 282 CAP-------LTAQAIQEGLRKEPVHRASAMELRRKVGKA 314 (336)
T ss_dssp SCH-------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCH-------HHHHHHHHHccCCHhHCcCHHHHHHHHHHH
Confidence 221 266789999999999999999999887654
No 11
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=4.7e-55 Score=422.36 Aligned_cols=267 Identities=22% Similarity=0.331 Sum_probs=214.0
Q ss_pred HHHHHHHhhCccccceeeeeCCceEEEEEcC------CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccC-CceeeE
Q 012219 162 FQDMIEATEDFHIKYCIGTGGYGSVYRARLP------SGKVVALKKLHRSETEELASLESFGNEARLLSQIRH-RNIVKL 234 (468)
Q Consensus 162 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~l 234 (468)
..+|+...++|++.+.||+|+||+||+|.+. .++.||||++...... ...+.|.+|++++.+++| ||||++
T Consensus 56 ~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~--~~~~~~~~E~~il~~l~hhpnIV~l 133 (353)
T 4ase_A 56 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH--SEHRALMSELKILIHIGHHLNVVNL 133 (353)
T ss_dssp HHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCH--HHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccCh--HHHHHHHHHHHHHHHcCCCCcEEEE
Confidence 4456666789999999999999999999753 2468999999865543 235789999999999965 899999
Q ss_pred EEEEeeC-CEEEEEEEeccCCChhhhhhcCcc-------------cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecC
Q 012219 235 YGFCLHR-KCMFLIYEYMEMGSLFCVLRTDEE-------------AVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRD 300 (468)
Q Consensus 235 ~~~~~~~-~~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~d 300 (468)
+|+|.+. +..++|||||++|+|.++|+.... ...+++.+++.++.|||.||+||| +++|||||
T Consensus 134 ~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH---~~~iiHRD 210 (353)
T 4ase_A 134 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRD 210 (353)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSC
T ss_pred EEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHh---hCCeecCc
Confidence 9999764 568999999999999999976432 234899999999999999999999 77999999
Q ss_pred CCCCceeeCCCCCeEEeeccccccccCCCCC--ceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCc
Q 012219 301 ISSNNVLLNSELEAFVADFGVARLLNFDSSN--RTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGEL 377 (468)
Q Consensus 301 lk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~ 377 (468)
|||+|||+++++.+||+|||+|+.+...... .....||+.|||||++.+..|+.++|||||||++|||+| |+.||..
T Consensus 211 LK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~ 290 (353)
T 4ase_A 211 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 290 (353)
T ss_dssp CSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTT
T ss_pred cCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCC
Confidence 9999999999999999999999877543332 223568999999999999999999999999999999998 9999986
Q ss_pred ccccchhhhcccccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcC
Q 012219 378 LSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARN 443 (468)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~ 443 (468)
.......... +.+...+..+...+ . .+.+++.+||+.||++|||+.+|+++|.++.
T Consensus 291 ~~~~~~~~~~---i~~g~~~~~p~~~~----~---~~~~li~~c~~~dP~~RPt~~eil~~L~~ll 346 (353)
T 4ase_A 291 VKIDEEFCRR---LKEGTRMRAPDYTT----P---EMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 346 (353)
T ss_dssp CCCSHHHHHH---HHHTCCCCCCTTCC----H---HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCHHHHHHHH---HHcCCCCCCCccCC----H---HHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence 5432221111 11111112222121 1 2677899999999999999999999998764
No 12
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=2.6e-54 Score=401.95 Aligned_cols=252 Identities=22% Similarity=0.333 Sum_probs=191.4
Q ss_pred hCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
++|++.+.||+|+||+||+|+. .+|+.||||++...........+.+.+|++++++++|||||++++++.+++..++||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 6899999999999999999975 579999999998765554455678999999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||+ +|+|.+++.... .+++.++..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+|+....
T Consensus 93 Ey~-~g~L~~~l~~~~---~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~- 164 (275)
T 3hyh_A 93 EYA-GNELFDYIVQRD---KMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD- 164 (275)
T ss_dssp ECC-CEEHHHHHHHSC---SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTCCEEECCSSCC------
T ss_pred eCC-CCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCChHHeEECCCCCEEEeecCCCeecCC-
Confidence 999 679999997654 3999999999999999999999 77999999999999999999999999999987643
Q ss_pred CCCceeccccccccccccccCCCC-CccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhH
Q 012219 329 SSNRTLLAGTYGYIAPELAYTMVV-TEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKI 407 (468)
Q Consensus 329 ~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (468)
.......+||+.|||||++.+..+ +.++||||+||++|||+||+.||......... .. +.. -...++...+
T Consensus 165 ~~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~-~~---i~~-~~~~~p~~~s--- 236 (275)
T 3hyh_A 165 GNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLF-KN---ISN-GVYTLPKFLS--- 236 (275)
T ss_dssp ----------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH-HH---HHH-TCCCCCTTSC---
T ss_pred CCccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHH-HH---HHc-CCCCCCCCCC---
Confidence 233345689999999999998876 57999999999999999999999754322111 10 000 0111222222
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHH-HHHh
Q 012219 408 RQDIILVSTVAFSCLRSQPKSRPTMQLVSN-EFIA 441 (468)
Q Consensus 408 ~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~-~l~~ 441 (468)
+ .+.+++.+||+.||++|||++|+++ .|.+
T Consensus 237 -~---~~~~li~~~L~~dP~~R~s~~eil~hpw~k 267 (275)
T 3hyh_A 237 -P---GAAGLIKRMLIVNPLNRISIHEIMQDDWFK 267 (275)
T ss_dssp -H---HHHHHHHHHSCSSGGGSCCHHHHHHCHHHH
T ss_pred -H---HHHHHHHHHccCChhHCcCHHHHHcCcccc
Confidence 2 2567899999999999999999985 3443
No 13
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=7.1e-54 Score=420.31 Aligned_cols=253 Identities=26% Similarity=0.383 Sum_probs=209.4
Q ss_pred hCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
+.|++.+.||+|+||.||+|+. .+|+.||||++....... .+.+.+|+++|+.++|||||++++++.+.+..||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~---~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVm 227 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR---RELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM 227 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSS---GGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhH---HHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEE
Confidence 5699999999999999999975 579999999997654332 346789999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
|||+||+|.+++... .+++.++..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+|+.+...
T Consensus 228 Ey~~gG~L~~~i~~~----~l~e~~~~~~~~qil~aL~ylH---~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~ 300 (423)
T 4fie_A 228 EFLEGGALTDIVTHT----RMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE 300 (423)
T ss_dssp ECCTTEEHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSS
T ss_pred eCCCCCcHHHHHhcc----CCCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEecCccceECCCC
Confidence 999999999999753 3899999999999999999999 779999999999999999999999999999987666
Q ss_pred CCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHH
Q 012219 329 SSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIR 408 (468)
Q Consensus 329 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (468)
.......+||+.|||||++.+..|+.++|||||||++|||++|+.||......... ..+.....+.+... ..+.
T Consensus 301 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~----~~i~~~~~~~~~~~--~~~s 374 (423)
T 4fie_A 301 VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM----KMIRDNLPPRLKNL--HKVS 374 (423)
T ss_dssp CCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH----HHHHHSCCCCCSCT--TSSC
T ss_pred CccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHH----HHHHcCCCCCCccc--ccCC
Confidence 55666778999999999999999999999999999999999999999754322111 11111111222111 1111
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCHHHHHHH-HHh
Q 012219 409 QDIILVSTVAFSCLRSQPKSRPTMQLVSNE-FIA 441 (468)
Q Consensus 409 ~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~-l~~ 441 (468)
. .+.+++.+||+.||++|||++|++++ |..
T Consensus 375 ~---~~~dli~~~L~~dP~~R~ta~ell~Hp~~~ 405 (423)
T 4fie_A 375 P---SLKGFLDRLLVRDPAQRATAAELLKHPFLA 405 (423)
T ss_dssp H---HHHHHHHHHSCSSTTTSCCHHHHTTCGGGG
T ss_pred H---HHHHHHHHHcCCChhHCcCHHHHhcCHHhc
Confidence 1 26679999999999999999999864 444
No 14
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=1.9e-54 Score=408.28 Aligned_cols=249 Identities=21% Similarity=0.307 Sum_probs=196.3
Q ss_pred hCccccceeeeeCCceEEEEEc----CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL----PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMF 245 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 245 (468)
++|++.+.||+|+||+||+|+. ..++.||||+++...... .....+.+|++++++++|||||++++++.+++..+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ 102 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKV-RDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLY 102 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEE-EECC------CCCCCCCCTTEECEEEEEEETTEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcCh-HHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEE
Confidence 5799999999999999999974 257899999997654322 12246788999999999999999999999999999
Q ss_pred EEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccc
Q 012219 246 LIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLL 325 (468)
Q Consensus 246 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~ 325 (468)
+|||||+||+|.+++.... .+++.++..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+|+..
T Consensus 103 ivmEy~~gg~L~~~l~~~~---~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~ 176 (304)
T 3ubd_A 103 LILDFLRGGDLFTRLSKEV---MFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKES 176 (304)
T ss_dssp EEECCCTTCEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTSCEEEESSEEEEC-
T ss_pred EEEEcCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHeEEcCCCCEEecccccceec
Confidence 9999999999999997643 3899999999999999999999 789999999999999999999999999999876
Q ss_pred cCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccch
Q 012219 326 NFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQ 405 (468)
Q Consensus 326 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (468)
..........+||+.|||||++.+..|+.++||||+||++|||+||+.||......... .. +.. ....++...+
T Consensus 177 ~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~-~~---i~~-~~~~~p~~~s- 250 (304)
T 3ubd_A 177 IDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETM-TM---ILK-AKLGMPQFLS- 250 (304)
T ss_dssp ----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH-HH---HHH-CCCCCCTTSC-
T ss_pred cCCCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHH-HH---HHc-CCCCCCCcCC-
Confidence 54444555678999999999999999999999999999999999999999754322111 10 000 0111222222
Q ss_pred hHHHHHHHHHHHHHhcccCCCCCCCCH-----HHHHH
Q 012219 406 KIRQDIILVSTVAFSCLRSQPKSRPTM-----QLVSN 437 (468)
Q Consensus 406 ~~~~~~~~l~~l~~~cl~~dP~~RPs~-----~~v~~ 437 (468)
. .+.+++.+||+.||++|||+ +|+++
T Consensus 251 ---~---~~~~li~~~L~~dP~~R~ta~~~~~~eil~ 281 (304)
T 3ubd_A 251 ---P---EAQSLLRMLFKRNPANRLGAGPDGVEEIKR 281 (304)
T ss_dssp ---H---HHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred ---H---HHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence 2 26679999999999999984 66664
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=1.3e-52 Score=397.25 Aligned_cols=251 Identities=21% Similarity=0.353 Sum_probs=191.3
Q ss_pred hCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCC------
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRK------ 242 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------ 242 (468)
++|++.+.||+|+||+||+|+. .+|+.||||+++..... ...+.+.+|++++++++|||||++++++.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~--~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~ 82 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRE--LAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQ 82 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSH--HHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCH--HHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccc
Confidence 5699999999999999999975 57999999999765433 23467899999999999999999999987543
Q ss_pred ------EEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEE
Q 012219 243 ------CMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFV 316 (468)
Q Consensus 243 ------~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl 316 (468)
..++|||||++|+|.+++.........++..++.++.||+.||+||| +.+|+||||||+|||++.++.+||
T Consensus 83 ~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH---~~~IiHRDlKp~NILl~~~~~vKl 159 (299)
T 4g31_A 83 PSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKV 159 (299)
T ss_dssp ----CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEE
T ss_pred ccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHH---HCcCccccCcHHHeEECCCCcEEE
Confidence 36899999999999999987655445677888999999999999999 779999999999999999999999
Q ss_pred eeccccccccCCCCC------------ceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchh
Q 012219 317 ADFGVARLLNFDSSN------------RTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWS 384 (468)
Q Consensus 317 ~Dfg~~~~~~~~~~~------------~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~ 384 (468)
+|||+|+.+...... .+..+||+.|||||++.+..|+.++|||||||++|||++ ||........
T Consensus 160 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~~~- 235 (299)
T 4g31_A 160 GDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERVR- 235 (299)
T ss_dssp CCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHH-
T ss_pred ccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHHHH-
Confidence 999999887533221 223579999999999999999999999999999999996 7653211100
Q ss_pred hhcccccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 385 LDKNIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
..........+ ...........+++.+||+.||++|||+.|++++
T Consensus 236 -----~~~~~~~~~~p----~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 280 (299)
T 4g31_A 236 -----TLTDVRNLKFP----PLFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN 280 (299)
T ss_dssp -----HHHHHHTTCCC----HHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred -----HHHHHhcCCCC----CCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 01111111111 1122222335679999999999999999999863
No 16
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=2e-49 Score=389.60 Aligned_cols=265 Identities=24% Similarity=0.326 Sum_probs=200.3
Q ss_pred hCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEee------CC
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLH------RK 242 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~------~~ 242 (468)
++|.+.+.||+|+||+||+|+. .+|+.||||+++...... ...+.+.+|+++|++++|||||++++++.. .+
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~ 132 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVV-TNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK 132 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSH-HHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccch-HHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCC
Confidence 5799999999999999999975 579999999997654322 335678899999999999999999999764 35
Q ss_pred EEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccc
Q 012219 243 CMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVA 322 (468)
Q Consensus 243 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~ 322 (468)
..|+|||||+ |+|.+++.... .+++.++..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+|
T Consensus 133 ~~~ivmE~~~-g~L~~~i~~~~---~l~~~~~~~~~~qil~al~ylH---~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla 205 (398)
T 4b99_A 133 SVYVVLDLME-SDLHQIIHSSQ---PLTLEHVRYFLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMA 205 (398)
T ss_dssp CEEEEEECCS-EEHHHHHTSSS---CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEEeCCC-CCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCcCcCCCcCccccccCCCCCEEEeeccee
Confidence 7899999996 67999997643 4999999999999999999999 789999999999999999999999999999
Q ss_pred ccccCC----CCCceeccccccccccccccCC-CCCccchhhHHHHHHHHHHhCCCCCCcccccchhhh---cc------
Q 012219 323 RLLNFD----SSNRTLLAGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLD---KN------ 388 (468)
Q Consensus 323 ~~~~~~----~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~---~~------ 388 (468)
+.+... .......+||+.|||||++.+. .++.++||||+||++|||++|++||........... ..
T Consensus 206 ~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~ 285 (398)
T 4b99_A 206 RGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPA 285 (398)
T ss_dssp BCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGG
T ss_pred eecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChH
Confidence 876432 2233456899999999998775 568999999999999999999999975432110000 00
Q ss_pred -------cc---cccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHH-HHHhc
Q 012219 389 -------IK---LIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSN-EFIAR 442 (468)
Q Consensus 389 -------~~---~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~-~l~~~ 442 (468)
.. ....+.+....+...........+.+++.+||+.||++|||++|+++ .|.+.
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~ 350 (398)
T 4b99_A 286 VIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAK 350 (398)
T ss_dssp GTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGTT
T ss_pred HhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCHhhCc
Confidence 00 00000011111100000000123668999999999999999999985 45443
No 17
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=3.6e-48 Score=376.65 Aligned_cols=196 Identities=27% Similarity=0.345 Sum_probs=168.6
Q ss_pred hhCccccceeeeeCCceEEEEEc----CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhc-cCCceeeEEEEEeeCCE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL----PSGKVVALKKLHRSETEELASLESFGNEARLLSQI-RHRNIVKLYGFCLHRKC 243 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~ 243 (468)
.++|++.+.||+|+||+||+|+. ..++.||+|++..... ...+.+|++++..+ +||||+++++++.+.+.
T Consensus 20 ~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~-----~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~ 94 (361)
T 4f9c_A 20 SNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSH-----PIRIAAELQCLTVAGGQDNVMGVKYCFRKNDH 94 (361)
T ss_dssp GGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSC-----HHHHHHHHHHHHHTCSBTTBCCCSEEEEETTE
T ss_pred cCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccC-----HHHHHHHHHHHHHhcCCCCCceEEEEEEECCE
Confidence 47899999999999999999964 2578899999876543 24577899999998 69999999999999999
Q ss_pred EEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCC-CCeEEeecccc
Q 012219 244 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSE-LEAFVADFGVA 322 (468)
Q Consensus 244 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~-~~~kl~Dfg~~ 322 (468)
.++||||+++|+|.+++.. +++.++..++.||+.||+||| +.||+||||||+|||++.+ +.+||+|||+|
T Consensus 95 ~~lvmE~~~g~~L~~~~~~------l~~~~~~~~~~qll~al~ylH---~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla 165 (361)
T 4f9c_A 95 VVIAMPYLEHESFLDILNS------LSFQEVREYMLNLFKALKRIH---QFGIVHRDVKPSNFLYNRRLKKYALVDFGLA 165 (361)
T ss_dssp EEEEEECCCCCCHHHHHTT------CCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred EEEEEeCCCcccHHHHHcC------CCHHHHHHHHHHHHHHHHHHH---HCCeEeCcCCHHHeEEeCCCCeEEECcCCCC
Confidence 9999999999999999842 889999999999999999999 7899999999999999877 79999999999
Q ss_pred ccccCCC----------------------------CCceeccccccccccccccCC-CCCccchhhHHHHHHHHHHhCCC
Q 012219 323 RLLNFDS----------------------------SNRTLLAGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGKH 373 (468)
Q Consensus 323 ~~~~~~~----------------------------~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~Gvil~el~tg~~ 373 (468)
+...... ......+||+.|+|||++.+. .++.++||||+||++|||+||+.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~ 245 (361)
T 4f9c_A 166 QGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRY 245 (361)
T ss_dssp EECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCS
T ss_pred cccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCC
Confidence 7653211 112235799999999998775 58999999999999999999999
Q ss_pred CCCcc
Q 012219 374 PGELL 378 (468)
Q Consensus 374 p~~~~ 378 (468)
||...
T Consensus 246 Pf~~~ 250 (361)
T 4f9c_A 246 PFYKA 250 (361)
T ss_dssp SSSCC
T ss_pred CCCCC
Confidence 99543
No 18
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=7.5e-48 Score=394.21 Aligned_cols=251 Identities=22% Similarity=0.269 Sum_probs=199.7
Q ss_pred hhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHH---HHHHHhhccCCceeeEEEEEeeCCEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGN---EARLLSQIRHRNIVKLYGFCLHRKCM 244 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~---e~~~l~~l~h~niv~l~~~~~~~~~~ 244 (468)
.++|.+.+.||+|+||+||+|+. .+|+.||+|++.+.............+ ++++++.++|||||++++++.+.+..
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 36799999999999999999975 579999999997654333222333334 45667778999999999999999999
Q ss_pred EEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccccc
Q 012219 245 FLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARL 324 (468)
Q Consensus 245 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~ 324 (468)
|+||||++||+|.+++.... .+++..+..++.||+.||+||| +.+||||||||+|||++.+|.+||+|||+|+.
T Consensus 268 ylVmEy~~GGdL~~~l~~~~---~l~E~~a~~y~~qIl~aL~yLH---~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~ 341 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQHG---VFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACD 341 (689)
T ss_dssp EEEECCCCSCBHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEEecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCchHHeEEeCCCCEEecccceeee
Confidence 99999999999999997643 3899999999999999999999 88999999999999999999999999999987
Q ss_pred ccCCCCCceeccccccccccccccC-CCCCccchhhHHHHHHHHHHhCCCCCCcccccch-hhhcccccccccCCCCCCc
Q 012219 325 LNFDSSNRTLLAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSW-SLDKNIKLIDLLDPRLSPP 402 (468)
Q Consensus 325 ~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 402 (468)
+... .....+||+.|||||++.. ..|+.++||||+||++|||++|+.||........ ..... .......++..
T Consensus 342 ~~~~--~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~---i~~~~~~~p~~ 416 (689)
T 3v5w_A 342 FSKK--KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRM---TLTMAVELPDS 416 (689)
T ss_dssp CSSC--CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHH---HHHCCCCCCTT
T ss_pred cCCC--CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh---hcCCCCCCCcc
Confidence 6533 2345689999999999974 5799999999999999999999999975332111 11100 00011122222
Q ss_pred cchhHHHHHHHHHHHHHhcccCCCCCCCC-----HHHHHH
Q 012219 403 VDQKIRQDIILVSTVAFSCLRSQPKSRPT-----MQLVSN 437 (468)
Q Consensus 403 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-----~~~v~~ 437 (468)
.+. .+.+++.+||+.||++|++ ++|+++
T Consensus 417 ~S~-------~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 417 FSP-------ELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp SCH-------HHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred CCH-------HHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 222 1567999999999999998 688874
No 19
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=1.4e-47 Score=369.91 Aligned_cols=284 Identities=36% Similarity=0.641 Sum_probs=228.4
Q ss_pred CCCcCHHHHHHHhhCccccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEE
Q 012219 157 DGRITFQDMIEATEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYG 236 (468)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~ 236 (468)
...+++.++....++|.+.+.||+|+||.||+|+..+++.||||++....... ....+.+|+++++.++||||+++++
T Consensus 17 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~e~~~l~~l~h~~iv~~~~ 94 (326)
T 3uim_A 17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQG--GELQFQTEVEMISMAVHRNLLRLRG 94 (326)
T ss_dssp CEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-------CCCHHHHHHHGGGTCCCTTBCCCCE
T ss_pred cceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCch--HHHHHHHHHHHHHhccCCCccceEE
Confidence 34678899999999999999999999999999998889999999998654332 2236889999999999999999999
Q ss_pred EEeeCCEEEEEEEeccCCChhhhhhcCc-ccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeE
Q 012219 237 FCLHRKCMFLIYEYMEMGSLFCVLRTDE-EAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAF 315 (468)
Q Consensus 237 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~k 315 (468)
++...+..++||||+++|+|.+++.... ....+++..++.++.|++.||+|||+.+..+|+||||||+||+++.++.+|
T Consensus 95 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~k 174 (326)
T 3uim_A 95 FCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV 174 (326)
T ss_dssp EECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEE
T ss_pred EEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEE
Confidence 9999999999999999999999998654 234589999999999999999999954444999999999999999999999
Q ss_pred EeeccccccccCCCCC-ceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccc--------h--h
Q 012219 316 VADFGVARLLNFDSSN-RTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSS--------W--S 384 (468)
Q Consensus 316 l~Dfg~~~~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~--------~--~ 384 (468)
|+|||+++........ .....||+.|+|||++.+..++.++|||||||++|||+||+.||+...... + .
T Consensus 175 l~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 254 (326)
T 3uim_A 175 VGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG 254 (326)
T ss_dssp ECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTT
T ss_pred eccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHH
Confidence 9999999876533322 233459999999999988889999999999999999999999996321100 0 0
Q ss_pred hhcccccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCCC
Q 012219 385 LDKNIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNKA 445 (468)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~~ 445 (468)
...........+......... +....+.+++.+||+.||++|||+.+|+++|+.....
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~~~ 312 (326)
T 3uim_A 255 LLKEKKLEALVDVDLQGNYKD---EEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLA 312 (326)
T ss_dssp TTSSCCSTTSSCTTCTTSCCH---HHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSSCS
T ss_pred HhhchhhhhhcChhhccccCH---HHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcchh
Confidence 011122233334444333332 3445588999999999999999999999999876544
No 20
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=1.6e-47 Score=393.99 Aligned_cols=253 Identities=23% Similarity=0.313 Sum_probs=206.2
Q ss_pred hhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLI 247 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 247 (468)
.++|.+.+.||+|+||.||+|.. .+|+.||+|++...... ..+.+.+|+++|+.++|||||++++++.+.+..++|
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~---~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv 232 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHES---DKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMI 232 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHH---HHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEE
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchh---hHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEE
Confidence 36899999999999999999975 57999999999765543 245788999999999999999999999999999999
Q ss_pred EEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCC--CCeEEeeccccccc
Q 012219 248 YEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSE--LEAFVADFGVARLL 325 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~--~~~kl~Dfg~~~~~ 325 (468)
||||+||+|.+++.... ..+++.++..++.||+.||.||| +.+|+||||||+|||++.+ +.+||+|||+|+.+
T Consensus 233 ~E~~~gg~L~~~i~~~~--~~l~e~~~~~~~~qi~~al~ylH---~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~ 307 (573)
T 3uto_A 233 YEFMSGGELFEKVADEH--NKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL 307 (573)
T ss_dssp EECCCCCBHHHHHTCTT--SCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCSSCEEC
T ss_pred EeecCCCcHHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCChhhccccCCCCCCEEEeeccceeEc
Confidence 99999999999986533 24899999999999999999999 7899999999999999865 89999999999987
Q ss_pred cCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccch
Q 012219 326 NFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQ 405 (468)
Q Consensus 326 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (468)
... ......+||+.|||||++.+..|+.++||||+||++|||++|+.||......... .... ..+..+......
T Consensus 308 ~~~-~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~-~~i~----~~~~~~~~~~~~ 381 (573)
T 3uto_A 308 DPK-QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETL-RNVK----SCDWNMDDSAFS 381 (573)
T ss_dssp CTT-SEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHH-HHHH----TTCCCCCSGGGT
T ss_pred cCC-CceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHH-HHHH----hCCCCCCccccc
Confidence 533 3345568999999999999999999999999999999999999999754332111 0000 011111111111
Q ss_pred hHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 406 KIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 406 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
.+.+ .+.+|+.+||+.||++|||++|++++
T Consensus 382 ~~s~---~~~dli~~~L~~dp~~R~t~~e~l~H 411 (573)
T 3uto_A 382 GISE---DGKDFIRKLLLADPNTRMTIHQALEH 411 (573)
T ss_dssp TSCH---HHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred CCCH---HHHHHHHHHccCChhHCcCHHHHhcC
Confidence 1112 25678999999999999999999864
No 21
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=4.8e-47 Score=363.23 Aligned_cols=266 Identities=27% Similarity=0.418 Sum_probs=205.2
Q ss_pred HhhCccccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEE
Q 012219 168 ATEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLI 247 (468)
Q Consensus 168 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 247 (468)
..++|.+.+.||+|+||+||+|+. .++.||||++....... ...+.|.+|++++++++||||+++++++......++|
T Consensus 35 ~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 3p86_A 35 PWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHA-ERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIV 112 (309)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSH-HHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEE
T ss_pred ChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEE
Confidence 356899999999999999999987 68899999997654332 3456789999999999999999999999999999999
Q ss_pred EEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEecCCCCCceeeCCCCCeEEeeccccccc
Q 012219 248 YEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPP--IVHRDISSNNVLLNSELEAFVADFGVARLL 325 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~--ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~ 325 (468)
|||+++|+|.+++........+++..++.++.|++.||+||| +.+ |+||||||+||+++.++.+||+|||+++..
T Consensus 113 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~ 189 (309)
T 3p86_A 113 TEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH---NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLK 189 (309)
T ss_dssp EECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHH---TSSSCCCCTTCCGGGEEECTTCCEEECCCC-----
T ss_pred EecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHH---cCCCCEECCCCChhhEEEeCCCcEEECCCCCCccc
Confidence 999999999999987654445899999999999999999999 677 999999999999999999999999999865
Q ss_pred cCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccch
Q 012219 326 NFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQ 405 (468)
Q Consensus 326 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (468)
...........||+.|+|||++.+..++.++|||||||++|||+||+.||............. ............+.
T Consensus 190 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 266 (309)
T 3p86_A 190 ASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVG---FKCKRLEIPRNLNP 266 (309)
T ss_dssp ------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHH---HSCCCCCCCTTSCH
T ss_pred cccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH---hcCCCCCCCccCCH
Confidence 544334445679999999999999999999999999999999999999997654322111100 00011111222221
Q ss_pred hHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCCCCCC
Q 012219 406 KIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNKAPMQ 448 (468)
Q Consensus 406 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~~~~~ 448 (468)
.+.+++.+||+.||++|||+.++++.|+...+...+
T Consensus 267 -------~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~p 302 (309)
T 3p86_A 267 -------QVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVP 302 (309)
T ss_dssp -------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC----
T ss_pred -------HHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhCCC
Confidence 266799999999999999999999999887665433
No 22
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=1.4e-46 Score=362.24 Aligned_cols=275 Identities=34% Similarity=0.545 Sum_probs=222.5
Q ss_pred cCHHHHHHHhhCccccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEe
Q 012219 160 ITFQDMIEATEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCL 239 (468)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~ 239 (468)
+++.++...+++|.+.+.||+|+||.||+|...+++.||||++...... ..+.+.+|+++++.++||||+++++++.
T Consensus 29 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~~iv~~~~~~~ 105 (321)
T 2qkw_B 29 VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQ---GIEEFETEIETLSFCRHPHLVSLIGFCD 105 (321)
T ss_dssp -CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSS---HHHHHHHHHHGGGSCCCTTBCCEEEECC
T ss_pred ecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChH---HHHHHHHHHHHHHhCCCCCEeeEEEEEc
Confidence 3344455567899999999999999999999888999999998765433 3567889999999999999999999999
Q ss_pred eCCEEEEEEEeccCCChhhhhhcCcc-cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEee
Q 012219 240 HRKCMFLIYEYMEMGSLFCVLRTDEE-AVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVAD 318 (468)
Q Consensus 240 ~~~~~~lv~e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~D 318 (468)
..+..++||||+++|+|.+++..... ...+++.+++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|
T Consensus 106 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~D 182 (321)
T 2qkw_B 106 ERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITD 182 (321)
T ss_dssp CTTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCSTTEEECTTCCEEECC
T ss_pred CCCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhc---CCCeecCCCCHHHEEECCCCCEEEee
Confidence 99999999999999999999976432 235899999999999999999999 77999999999999999999999999
Q ss_pred ccccccccCCC--CCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccch------h--hhcc
Q 012219 319 FGVARLLNFDS--SNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSW------S--LDKN 388 (468)
Q Consensus 319 fg~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~------~--~~~~ 388 (468)
||+++...... .......||+.|+|||++.+..++.++|||||||++|||+||+.||........ . ....
T Consensus 183 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~ 262 (321)
T 2qkw_B 183 FGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNN 262 (321)
T ss_dssp CTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTT
T ss_pred cccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhcccc
Confidence 99998654221 222334689999999999888999999999999999999999999864332110 0 1112
Q ss_pred cccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcC
Q 012219 389 IKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARN 443 (468)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~ 443 (468)
......+++........ +....+.+++.+||+.||++|||+.++++.|+...
T Consensus 263 ~~~~~~~~~~~~~~~~~---~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l 314 (321)
T 2qkw_B 263 GQLEQIVDPNLADKIRP---ESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYAL 314 (321)
T ss_dssp TCCCSSSSSSCTTCSCH---HHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ccHHHhcChhhccccCH---HHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence 22334444444433332 33445888999999999999999999999998764
No 23
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=1e-45 Score=352.10 Aligned_cols=256 Identities=24% Similarity=0.366 Sum_probs=209.2
Q ss_pred hhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLI 247 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 247 (468)
.++|.+.+.||+|+||+||+|.. .+++.||+|++...... ..+.+.+|+.++++++||||+++++++...+..++|
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 95 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP---KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVV 95 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCS---CHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeeccccc---HHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEE
Confidence 36799999999999999999974 67899999999754432 245788999999999999999999999999999999
Q ss_pred EEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccC
Q 012219 248 YEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNF 327 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~ 327 (468)
|||+++|+|.+++... .+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++.....
T Consensus 96 ~e~~~~~~L~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 168 (297)
T 3fxz_A 96 MEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP 168 (297)
T ss_dssp EECCTTCBHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCS
T ss_pred EECCCCCCHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEECCCCCEEEeeCCCceecCC
Confidence 9999999999999754 3899999999999999999999 77999999999999999999999999999988765
Q ss_pred CCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhH
Q 012219 328 DSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKI 407 (468)
Q Consensus 328 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (468)
.........||+.|+|||++.+..++.++|||||||++|||+||+.||............ .....+.... ....
T Consensus 169 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~----~~~~~~~~~~--~~~~ 242 (297)
T 3fxz_A 169 EQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLI----ATNGTPELQN--PEKL 242 (297)
T ss_dssp TTCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH----HHHCSCCCSC--GGGS
T ss_pred cccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH----HhCCCCCCCC--cccc
Confidence 555556678999999999999999999999999999999999999999754322111110 0000111111 1111
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHH-HHHhcC
Q 012219 408 RQDIILVSTVAFSCLRSQPKSRPTMQLVSN-EFIARN 443 (468)
Q Consensus 408 ~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~-~l~~~~ 443 (468)
. ..+.+++.+||+.||++|||++++++ .|.+..
T Consensus 243 ~---~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~ 276 (297)
T 3fxz_A 243 S---AIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIA 276 (297)
T ss_dssp C---HHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGC
T ss_pred C---HHHHHHHHHHccCChhHCcCHHHHhhChhhccc
Confidence 1 12667999999999999999999985 444443
No 24
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.2e-45 Score=351.18 Aligned_cols=263 Identities=25% Similarity=0.358 Sum_probs=207.7
Q ss_pred hCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
++|.+.+.||+|+||.||+|.. .+++.||+|++...........+.|.+|+.++.+++||||+++++++...+..++||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 90 (294)
T 4eqm_A 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVM 90 (294)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEE
Confidence 5799999999999999999974 578999999987655444455678999999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||+++|+|.+++.... .+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 91 e~~~g~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 164 (294)
T 4eqm_A 91 EYIEGPTLSEYIESHG---PLSVDTAINFTNQILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSET 164 (294)
T ss_dssp ECCCSCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC---
T ss_pred eCCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEEeCCCccccccc
Confidence 9999999999997643 4899999999999999999999 779999999999999999999999999999876432
Q ss_pred CC-CceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhH
Q 012219 329 SS-NRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKI 407 (468)
Q Consensus 329 ~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (468)
.. ......||+.|+|||.+.+..++.++||||||+++|||+||+.||............................+
T Consensus 165 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 241 (294)
T 4eqm_A 165 SLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIP--- 241 (294)
T ss_dssp ----------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCCCCHHHHSCTTSC---
T ss_pred cccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccCCCcchhcccCCC---
Confidence 22 22335689999999999999999999999999999999999999976543221111100000000001111111
Q ss_pred HHHHHHHHHHHHhcccCCCCCCC-CHHHHHHHHHhcCCC
Q 012219 408 RQDIILVSTVAFSCLRSQPKSRP-TMQLVSNEFIARNKA 445 (468)
Q Consensus 408 ~~~~~~l~~l~~~cl~~dP~~RP-s~~~v~~~l~~~~~~ 445 (468)
..+.+++.+|++.||++|| +++++.+.|......
T Consensus 242 ----~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~ 276 (294)
T 4eqm_A 242 ----QSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHE 276 (294)
T ss_dssp ----HHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSS
T ss_pred ----HHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhh
Confidence 2267799999999999998 889999999886543
No 25
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=3.1e-45 Score=351.02 Aligned_cols=258 Identities=25% Similarity=0.458 Sum_probs=207.9
Q ss_pred hhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLI 247 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 247 (468)
.++|.+.+.||+|+||.||+|.. .+++.||+|++...... ..+.|.+|++++++++||||+++++++.+.+..++|
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~---~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 85 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEE---TQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFI 85 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHH---HHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHH---HHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEE
Confidence 35789999999999999999975 46899999998664432 457899999999999999999999999999999999
Q ss_pred EEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccC
Q 012219 248 YEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNF 327 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~ 327 (468)
|||+++|+|.+++..... .+++.+++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 86 ~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~al~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 160 (310)
T 3s95_A 86 TEYIKGGTLRGIIKSMDS--QYPWSQRVSFAKDIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVD 160 (310)
T ss_dssp EECCTTCBHHHHHHHCCT--TSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEECTTSCEEECCCTTCEECC-
T ss_pred EEecCCCcHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCcCeEEECCCCCEEEeecccceeccc
Confidence 999999999999986432 4899999999999999999999 77999999999999999999999999999987643
Q ss_pred CCCCc--------------eeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhccccccc
Q 012219 328 DSSNR--------------TLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLID 393 (468)
Q Consensus 328 ~~~~~--------------~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~ 393 (468)
..... ....||+.|+|||++.+..++.++||||||+++|||++|..|+........... .....
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~--~~~~~ 238 (310)
T 3s95_A 161 EKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFG--LNVRG 238 (310)
T ss_dssp -------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSS--BCHHH
T ss_pred ccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHh--hhhhc
Confidence 22211 145689999999999999999999999999999999999999865332211110 01111
Q ss_pred ccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcC
Q 012219 394 LLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARN 443 (468)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~ 443 (468)
..+.......+. .+.+++.+||+.||++|||+.++++.|+...
T Consensus 239 ~~~~~~~~~~~~-------~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~ 281 (310)
T 3s95_A 239 FLDRYCPPNCPP-------SFFPITVRCCDLDPEKRPSFVKLEHWLETLR 281 (310)
T ss_dssp HHHHTCCTTCCT-------THHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cccccCCCCCCH-------HHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 111111222221 1667899999999999999999999988765
No 26
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=7.6e-45 Score=347.78 Aligned_cols=277 Identities=29% Similarity=0.501 Sum_probs=223.7
Q ss_pred CCcCHHHHHHHhhCcccc------ceeeeeCCceEEEEEcCCCCEEEEEEecCcch-hhhhhHHHHHHHHHHHhhccCCc
Q 012219 158 GRITFQDMIEATEDFHIK------YCIGTGGYGSVYRARLPSGKVVALKKLHRSET-EELASLESFGNEARLLSQIRHRN 230 (468)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~------~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~n 230 (468)
..+++.++..++++|... +.||+|+||.||+|.. +++.||||++..... ......+.|.+|++++++++|||
T Consensus 13 ~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 91 (307)
T 2nru_A 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN 91 (307)
T ss_dssp EECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTT
T ss_pred CcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCC
Confidence 457899999999999887 8999999999999987 688999999875432 11234567899999999999999
Q ss_pred eeeEEEEEeeCCEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCC
Q 012219 231 IVKLYGFCLHRKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNS 310 (468)
Q Consensus 231 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~ 310 (468)
|+++++++...+..++||||+++|+|.+++........+++..++.++.|++.||.||| +.+|+||||||+||+++.
T Consensus 92 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nili~~ 168 (307)
T 2nru_A 92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDE 168 (307)
T ss_dssp BCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECT
T ss_pred eEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecCCCCHHHEEEcC
Confidence 99999999999999999999999999999986555556999999999999999999999 779999999999999999
Q ss_pred CCCeEEeeccccccccCCCCC--ceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhh---
Q 012219 311 ELEAFVADFGVARLLNFDSSN--RTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSL--- 385 (468)
Q Consensus 311 ~~~~kl~Dfg~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~--- 385 (468)
++.+||+|||+++........ .....|++.|+|||.+.+ .++.++||||||+++|+|++|+.||..........
T Consensus 169 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~ 247 (307)
T 2nru_A 169 AFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIK 247 (307)
T ss_dssp TCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHH
T ss_pred CCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHH
Confidence 999999999999876432221 223468999999998765 58899999999999999999999997544321110
Q ss_pred ----hcccccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcC
Q 012219 386 ----DKNIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARN 443 (468)
Q Consensus 386 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~ 443 (468)
.......+.+++.+.... ......+.+++.+||+.||++|||+.++++.|+++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~ 305 (307)
T 2nru_A 248 EEIEDEEKTIEDYIDKKMNDAD----STSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT 305 (307)
T ss_dssp HHHHTTSCCHHHHSCSSCSCCC----HHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC
T ss_pred HHhhhhhhhhhhhccccccccc----hHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence 011112233343333221 123345788999999999999999999999998764
No 27
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=3.6e-45 Score=352.17 Aligned_cols=263 Identities=26% Similarity=0.378 Sum_probs=213.4
Q ss_pred CCcCHHHHHHHhhC----------ccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhc
Q 012219 158 GRITFQDMIEATED----------FHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQI 226 (468)
Q Consensus 158 ~~~~~~~~~~~~~~----------~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l 226 (468)
..++++++..+++. |...+.||+|+||.||+|+.. +|+.||||++...... ..+.+.+|+.+++++
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~---~~~~~~~E~~~l~~l 99 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQ---RRELLFNEVVIMRDY 99 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC---SHHHHHHHHHHHTTC
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchh---HHHHHHHHHHHHHhC
Confidence 45788888887764 677789999999999999865 7999999999754432 346788999999999
Q ss_pred cCCceeeEEEEEeeCCEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCce
Q 012219 227 RHRNIVKLYGFCLHRKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNV 306 (468)
Q Consensus 227 ~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NI 306 (468)
+||||+++++++...+..++||||+++|+|.+++... .+++..+..++.|++.||.||| +.+|+||||||+||
T Consensus 100 ~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~----~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NI 172 (321)
T 2c30_A 100 QHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV----RLNEEQIATVCEAVLQALAYLH---AQGVIHRDIKSDSI 172 (321)
T ss_dssp CCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTC----CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGE
T ss_pred CCCCcceEEEEEEECCEEEEEEecCCCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHE
Confidence 9999999999999999999999999999999998643 3899999999999999999999 67999999999999
Q ss_pred eeCCCCCeEEeeccccccccCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhh
Q 012219 307 LLNSELEAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLD 386 (468)
Q Consensus 307 ll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~ 386 (468)
+++.++.+||+|||+++.............||+.|+|||++.+..++.++||||||+++|||++|+.||.........
T Consensus 173 ll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~-- 250 (321)
T 2c30_A 173 LLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAM-- 250 (321)
T ss_dssp EECTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH--
T ss_pred EECCCCcEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH--
Confidence 999999999999999987765444445567999999999999999999999999999999999999999754321111
Q ss_pred cccccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Q 012219 387 KNIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEF 439 (468)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l 439 (468)
........+..... .... ..+.+++.+||+.||++|||+.+++++-
T Consensus 251 --~~~~~~~~~~~~~~--~~~~---~~l~~li~~~l~~dp~~Rps~~ell~hp 296 (321)
T 2c30_A 251 --KRLRDSPPPKLKNS--HKVS---PVLRDFLERMLVRDPQERATAQELLDHP 296 (321)
T ss_dssp --HHHHHSSCCCCTTG--GGSC---HHHHHHHHHHSCSSTTTSCCHHHHHTSG
T ss_pred --HHHhcCCCCCcCcc--ccCC---HHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence 11111111111111 1111 1266799999999999999999999653
No 28
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=2.7e-45 Score=354.70 Aligned_cols=252 Identities=23% Similarity=0.304 Sum_probs=207.7
Q ss_pred hhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLI 247 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 247 (468)
.++|.+.+.||+|+||.||+|+. .+|+.||+|+++..........+.+.+|+++++.++||||+++++++...+..++|
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 36799999999999999999975 46999999999865443344567788999999999999999999999999999999
Q ss_pred EEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccC
Q 012219 248 YEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNF 327 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~ 327 (468)
|||+++|+|.+++.... .+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++....
T Consensus 84 ~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 157 (337)
T 1o6l_A 84 MEYANGGELFFHLSRER---VFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS 157 (337)
T ss_dssp EECCTTCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred EeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCCHHHEEECCCCCEEEeeccchhhccc
Confidence 99999999999987543 3899999999999999999999 77999999999999999999999999999986544
Q ss_pred CCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhH
Q 012219 328 DSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKI 407 (468)
Q Consensus 328 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (468)
........+||+.|+|||++.+..++.++|||||||++|||++|+.||........... ... -...++...+.
T Consensus 158 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~--i~~---~~~~~p~~~s~-- 230 (337)
T 1o6l_A 158 DGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL--ILM---EEIRFPRTLSP-- 230 (337)
T ss_dssp TTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH--HHH---CCCCCCTTSCH--
T ss_pred CCCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHH--HHc---CCCCCCCCCCH--
Confidence 44445567899999999999999999999999999999999999999975432211100 000 01112222221
Q ss_pred HHHHHHHHHHHHhcccCCCCCCC-----CHHHHHHH
Q 012219 408 RQDIILVSTVAFSCLRSQPKSRP-----TMQLVSNE 438 (468)
Q Consensus 408 ~~~~~~l~~l~~~cl~~dP~~RP-----s~~~v~~~ 438 (468)
.+.+++.+||+.||++|| ++++++++
T Consensus 231 -----~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 231 -----EAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp -----HHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred -----HHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 266789999999999999 89999864
No 29
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=1.4e-45 Score=355.50 Aligned_cols=250 Identities=24% Similarity=0.383 Sum_probs=204.7
Q ss_pred hhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLI 247 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 247 (468)
.++|.+.+.||+|+||.||+|.. .+|+.||||++....... ...+.+.+|+++++.++||||+++++++...+..++|
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 92 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNP-TSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLI 92 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCH-HHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEE
Confidence 46799999999999999999975 689999999997654322 3456788999999999999999999999999999999
Q ss_pred EEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccC
Q 012219 248 YEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNF 327 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~ 327 (468)
|||+++|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 93 ~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 166 (328)
T 3fe3_A 93 MEYASGGEVFDYLVAHG---RMKEKEARSKFRQIVSAVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTV 166 (328)
T ss_dssp ECCCTTCBHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSS
T ss_pred EECCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCCHHHEEEcCCCCEEEeeccCceecCC
Confidence 99999999999997643 3899999999999999999999 77999999999999999999999999999987653
Q ss_pred CCCCceeccccccccccccccCCCCC-ccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchh
Q 012219 328 DSSNRTLLAGTYGYIAPELAYTMVVT-EKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQK 406 (468)
Q Consensus 328 ~~~~~~~~~g~~~y~aPE~~~~~~~~-~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (468)
. .......||+.|+|||++.+..++ .++||||+||++|||+||+.||+........... .. -....+...+.
T Consensus 167 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i----~~-~~~~~p~~~s~- 239 (328)
T 3fe3_A 167 G-GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERV----LR-GKYRIPFYMST- 239 (328)
T ss_dssp S-CGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH----HH-CCCCCCTTSCH-
T ss_pred C-CccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHH----Hh-CCCCCCCCCCH-
Confidence 3 334456799999999999887765 7999999999999999999999754322111100 00 00111111111
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 407 IRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 407 ~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
.+.+++.+||+.||++|||+++++++
T Consensus 240 ------~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 240 ------DCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp ------HHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred ------HHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 25678999999999999999999864
No 30
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=2.7e-45 Score=359.87 Aligned_cols=259 Identities=25% Similarity=0.368 Sum_probs=208.7
Q ss_pred hhCccccceeeeeCCceEEEEEc--------CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhc-cCCceeeEEEEEe
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL--------PSGKVVALKKLHRSETEELASLESFGNEARLLSQI-RHRNIVKLYGFCL 239 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~--------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~ 239 (468)
.++|.+.+.||+|+||.||+|.. .++..||||+++..... ...+.+.+|+++++++ +||||++++++|.
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~ 157 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE--KDLSDLVSEMEMMKMIGKHKNIINLLGACT 157 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBH--HHHHHHHHHHHHHHHSCCCTTBCCEEEEEC
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCH--HHHHHHHHHHHHHHHhcCCCCEeeEEEEEc
Confidence 36799999999999999999974 24567999999865433 3457899999999999 8999999999999
Q ss_pred eCCEEEEEEEeccCCChhhhhhcCcc-------------cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCce
Q 012219 240 HRKCMFLIYEYMEMGSLFCVLRTDEE-------------AVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNV 306 (468)
Q Consensus 240 ~~~~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NI 306 (468)
..+..++||||+++|+|.+++..... ...+++.+++.++.||+.||.||| +.+|+||||||+||
T Consensus 158 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NI 234 (370)
T 2psq_A 158 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNV 234 (370)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGE
T ss_pred cCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeccccchhhE
Confidence 99999999999999999999976432 234789999999999999999999 77999999999999
Q ss_pred eeCCCCCeEEeeccccccccCCCC--CceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccch
Q 012219 307 LLNSELEAFVADFGVARLLNFDSS--NRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSW 383 (468)
Q Consensus 307 ll~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~ 383 (468)
|++.++.+||+|||+++....... ......+++.|+|||++.+..++.++|||||||++|||+| |+.||........
T Consensus 235 ll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~ 314 (370)
T 2psq_A 235 LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 314 (370)
T ss_dssp EECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH
T ss_pred EECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHH
Confidence 999999999999999987643322 1223456789999999999999999999999999999999 9999976543221
Q ss_pred hhhcccccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcC
Q 012219 384 SLDKNIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARN 443 (468)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~ 443 (468)
... ......+....... ..+.+++.+||+.||++|||+.++++.|.++.
T Consensus 315 ~~~----~~~~~~~~~~~~~~-------~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il 363 (370)
T 2psq_A 315 FKL----LKEGHRMDKPANCT-------NELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 363 (370)
T ss_dssp HHH----HHTTCCCCCCTTSC-------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHH----HhcCCCCCCCCCCC-------HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 110 00111111111111 12677999999999999999999999998753
No 31
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=2.3e-45 Score=353.82 Aligned_cols=263 Identities=23% Similarity=0.331 Sum_probs=203.3
Q ss_pred hhCccccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCC----EE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRK----CM 244 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----~~ 244 (468)
.++|.+.+.||+|+||.||+|+.. ++.||||++...... ...+.+|+.++.+++||||+++++++.... ..
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 97 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDKQ----SWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDL 97 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGGHH----HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCchH----HHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceE
Confidence 467999999999999999999875 789999999755432 244567899999999999999999998743 47
Q ss_pred EEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCC----------CeEecCCCCCceeeCCCCCe
Q 012219 245 FLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTP----------PIVHRDISSNNVLLNSELEA 314 (468)
Q Consensus 245 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~----------~ivH~dlk~~NIll~~~~~~ 314 (468)
++||||+++|+|.+++... .+++..++.++.|++.||+||| +. +|+||||||+||+++.++.+
T Consensus 98 ~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~qi~~al~~LH---~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~ 170 (322)
T 3soc_A 98 WLITAFHEKGSLSDFLKAN----VVSWNELCHIAETMARGLAYLH---EDIPGLKDGHKPAISHRDIKSKNVLLKNNLTA 170 (322)
T ss_dssp EEEEECCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHT---CCEEEETTEEECEEECSCCSGGGEEECTTCCE
T ss_pred EEEEecCCCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHH---hhccccccccCCCEEeCCCChHhEEECCCCeE
Confidence 9999999999999999753 3899999999999999999999 66 99999999999999999999
Q ss_pred EEeeccccccccCCCCC--ceeccccccccccccccC-----CCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhh-
Q 012219 315 FVADFGVARLLNFDSSN--RTLLAGTYGYIAPELAYT-----MVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLD- 386 (468)
Q Consensus 315 kl~Dfg~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~-----~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~- 386 (468)
||+|||+++........ .....||+.|+|||++.+ ..++.++|||||||++|||+||+.||...........
T Consensus 171 kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~ 250 (322)
T 3soc_A 171 CIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFE 250 (322)
T ss_dssp EECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTH
T ss_pred EEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchh
Confidence 99999999876543222 223578999999999876 3567789999999999999999999875322110000
Q ss_pred -------ccccccc-ccCCCCCCccchh--HHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcC
Q 012219 387 -------KNIKLID-LLDPRLSPPVDQK--IRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARN 443 (468)
Q Consensus 387 -------~~~~~~~-~~~~~~~~~~~~~--~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~ 443 (468)
......+ .......+..... .......+.+++.+||+.||++|||+.++++.|+++.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 317 (322)
T 3soc_A 251 EEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQ 317 (322)
T ss_dssp HHHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred hhhccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 0000000 0111111111111 0123344888999999999999999999999998764
No 32
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=6e-45 Score=347.39 Aligned_cols=261 Identities=26% Similarity=0.414 Sum_probs=199.8
Q ss_pred hhCccccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhh--ccCCceeeEEEEEee----CC
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQ--IRHRNIVKLYGFCLH----RK 242 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~----~~ 242 (468)
.++|.+.+.||+|+||.||+|+. +++.||||++.... .+.+..|.+++.. ++||||+++++++.. ..
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~------~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~ 79 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSRD------EKSWFRETELYNTVMLRHENILGFIASDMTSRHSST 79 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGGG------HHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEecccc------chhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCc
Confidence 36799999999999999999988 68999999997543 2445567777766 799999999998764 34
Q ss_pred EEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhc-----CCCCeEecCCCCCceeeCCCCCeEEe
Q 012219 243 CMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHD-----CTPPIVHRDISSNNVLLNSELEAFVA 317 (468)
Q Consensus 243 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-----~~~~ivH~dlk~~NIll~~~~~~kl~ 317 (468)
..++||||+++|+|.++++.. .+++..++.++.|++.||+|||.. ++.+|+||||||+||+++.++.+||+
T Consensus 80 ~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 155 (301)
T 3q4u_A 80 QLWLITHYHEMGSLYDYLQLT----TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIA 155 (301)
T ss_dssp EEEEEECCCTTCBHHHHHTTC----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEEC
T ss_pred eeEEehhhccCCCHHHHHhhc----ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEe
Confidence 589999999999999999643 489999999999999999999932 15689999999999999999999999
Q ss_pred eccccccccCCCCC----ceeccccccccccccccCC------CCCccchhhHHHHHHHHHHhC----------CCCCCc
Q 012219 318 DFGVARLLNFDSSN----RTLLAGTYGYIAPELAYTM------VVTEKCDVYSFGVVALEVLMG----------KHPGEL 377 (468)
Q Consensus 318 Dfg~~~~~~~~~~~----~~~~~g~~~y~aPE~~~~~------~~~~~~Dv~s~Gvil~el~tg----------~~p~~~ 377 (468)
|||+++........ .....||+.|+|||++.+. .++.++|||||||++|||+|| +.||..
T Consensus 156 Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~ 235 (301)
T 3q4u_A 156 DLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYD 235 (301)
T ss_dssp CCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTT
T ss_pred eCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccc
Confidence 99999876433222 1234789999999998876 556799999999999999999 777754
Q ss_pred ccccchhhhcccc--cccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhc
Q 012219 378 LSSSSWSLDKNIK--LIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIAR 442 (468)
Q Consensus 378 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~ 442 (468)
............. ......+..... .........+.+++.+||+.||++|||+.++++.|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 236 VVPNDPSFEDMRKVVCVDQQRPNIPNR--WFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp TSCSSCCHHHHHHHHTTSCCCCCCCGG--GGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred cCCCCcchhhhhHHHhccCCCCCCChh--hccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 3222111111000 111111222111 11112334588899999999999999999999999875
No 33
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=2.7e-45 Score=353.74 Aligned_cols=259 Identities=29% Similarity=0.406 Sum_probs=206.6
Q ss_pred hCccccceeeeeCCceEEEEEcC----CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLP----SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMF 245 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 245 (468)
++|.+.+.||+|+||.||+|... .+..||||+++..... ...+.|.+|++++++++||||+++++++.+.+..+
T Consensus 49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 126 (325)
T 3kul_A 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTE--RQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAM 126 (325)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCH--HHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCE
T ss_pred hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCH--HHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccE
Confidence 57889999999999999999863 3456999999865433 23567999999999999999999999999999999
Q ss_pred EEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccc
Q 012219 246 LIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLL 325 (468)
Q Consensus 246 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~ 325 (468)
+||||+++|+|.+++.... ..+++.+++.++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 127 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 201 (325)
T 3kul_A 127 IVTEYMENGSLDTFLRTHD--GQFTIMQLVGMLRGVGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVL 201 (325)
T ss_dssp EEEECCTTCBHHHHHHTTT--TCSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCSSCEEC
T ss_pred EEeeCCCCCcHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEECCCCCEEECCCCccccc
Confidence 9999999999999997543 24899999999999999999999 779999999999999999999999999999876
Q ss_pred cCCCCCc---eeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCCCCCC
Q 012219 326 NFDSSNR---TLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDPRLSP 401 (468)
Q Consensus 326 ~~~~~~~---~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (468)
....... ....+|+.|+|||++.+..++.++|||||||++|||++ |+.||........... ...........
T Consensus 202 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~----~~~~~~~~~~~ 277 (325)
T 3kul_A 202 EDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISS----VEEGYRLPAPM 277 (325)
T ss_dssp C----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHH----HHTTCCCCCCT
T ss_pred ccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHH----HHcCCCCCCCC
Confidence 5432222 12345778999999998899999999999999999999 9999975443221111 01111111111
Q ss_pred ccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCCCC
Q 012219 402 PVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNKAP 446 (468)
Q Consensus 402 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~~~ 446 (468)
..+ . .+.+++.+||+.||++|||+.++++.|......+
T Consensus 278 ~~~----~---~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~ 315 (325)
T 3kul_A 278 GCP----H---ALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSP 315 (325)
T ss_dssp TCC----H---HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSC
T ss_pred CcC----H---HHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCc
Confidence 111 1 2677999999999999999999999998876543
No 34
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=4.3e-45 Score=342.50 Aligned_cols=257 Identities=24% Similarity=0.420 Sum_probs=209.1
Q ss_pred hhCccccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
.++|.+.+.||+|+||.||+|+..++..||+|++...... .+.+.+|++++.+++||||+++++++......++||
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 82 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMS----EDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVT 82 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTBC----HHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEE
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCCc----HHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEE
Confidence 3678999999999999999999988889999999865433 356889999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||+++++|.+++.... ..+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 83 e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~ 157 (268)
T 3sxs_A 83 EYISNGCLLNYLRSHG--KGLEPSQLLEMCYDVCEGMAFLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDD 157 (268)
T ss_dssp ECCTTCBHHHHHHHHG--GGCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTT
T ss_pred EccCCCcHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCcCcceEEECCCCCEEEccCccceecchh
Confidence 9999999999997643 24899999999999999999999 779999999999999999999999999999876432
Q ss_pred CCC-ceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCCCCCCccchh
Q 012219 329 SSN-RTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQK 406 (468)
Q Consensus 329 ~~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (468)
... .....+++.|+|||.+.+..++.++||||||+++|||+| |+.||............ ............+
T Consensus 158 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~----~~~~~~~~~~~~~-- 231 (268)
T 3sxs_A 158 QYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKV----SQGHRLYRPHLAS-- 231 (268)
T ss_dssp CEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHH----HTTCCCCCCTTSC--
T ss_pred hhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHH----HcCCCCCCCCcCh--
Confidence 211 122345678999999998899999999999999999999 99999755432221111 0000111111111
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCCC
Q 012219 407 IRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNKA 445 (468)
Q Consensus 407 ~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~~ 445 (468)
+ .+.+++.+||+.||++|||+.++++.|+...+.
T Consensus 232 --~---~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (268)
T 3sxs_A 232 --D---TIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK 265 (268)
T ss_dssp --H---HHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred --H---HHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence 1 267799999999999999999999999887543
No 35
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=6.4e-45 Score=351.68 Aligned_cols=253 Identities=23% Similarity=0.324 Sum_probs=203.9
Q ss_pred hCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
++|.+.+.||+|+||.||+|.. .+++.||+|++...........+.+.+|+++++.++||||+++++++...+..++||
T Consensus 9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 88 (336)
T 3h4j_B 9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVI 88 (336)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 5799999999999999999975 678999999997654443334467889999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||+ +|+|.+++.... .+++.++..++.||+.||.||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 89 E~~-~g~l~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~ 161 (336)
T 3h4j_B 89 EYA-GGELFDYIVEKK---RMTEDEGRRFFQQIICAIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG 161 (336)
T ss_dssp CCC-CEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTS
T ss_pred ECC-CCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCchhhEEEcCCCCEEEEEeccceeccCC
Confidence 999 689998886543 3899999999999999999999 679999999999999999999999999999876432
Q ss_pred CCCceeccccccccccccccCCCC-CccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhH
Q 012219 329 SSNRTLLAGTYGYIAPELAYTMVV-TEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKI 407 (468)
Q Consensus 329 ~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (468)
.......||+.|+|||++.+..+ +.++|||||||++|+|++|+.||+......... .... .....+...+
T Consensus 162 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~----~i~~-~~~~~p~~~s--- 232 (336)
T 3h4j_B 162 -NFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFK----KVNS-CVYVMPDFLS--- 232 (336)
T ss_dssp -BTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBC----CCCS-SCCCCCTTSC---
T ss_pred -cccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHH----HHHc-CCCCCcccCC---
Confidence 33344579999999999988776 689999999999999999999997543211100 0000 0011111111
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHH-HHHhc
Q 012219 408 RQDIILVSTVAFSCLRSQPKSRPTMQLVSN-EFIAR 442 (468)
Q Consensus 408 ~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~-~l~~~ 442 (468)
. .+.+++.+||+.||.+|||++|+++ .|.+.
T Consensus 233 -~---~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~ 264 (336)
T 3h4j_B 233 -P---GAQSLIRRMIVADPMQRITIQEIRRDPWFNV 264 (336)
T ss_dssp -H---HHHHHHHTTSCSSGGGSCCHHHHTTCHHHHT
T ss_pred -H---HHHHHHHHHcCCChhHCcCHHHHHhChhhcc
Confidence 1 2667999999999999999999984 45543
No 36
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=1.4e-44 Score=361.89 Aligned_cols=256 Identities=22% Similarity=0.278 Sum_probs=205.7
Q ss_pred HhhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEE
Q 012219 168 ATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFL 246 (468)
Q Consensus 168 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 246 (468)
..++|.+.+.||+|+||.||+|.. .+|+.+|+|++....... ...+.+.+|+++++.++||||+++++++.+.+..++
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~-~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 87 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSA-RDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYL 87 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHH-HHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEE
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCH-HHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEE
Confidence 356799999999999999999964 578999999998665432 335678899999999999999999999999999999
Q ss_pred EEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeC---CCCCeEEeeccccc
Q 012219 247 IYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLN---SELEAFVADFGVAR 323 (468)
Q Consensus 247 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~---~~~~~kl~Dfg~~~ 323 (468)
||||+++|+|.+.+.... .+++..+..++.||+.||.||| +.+|+||||||+|||++ .++.+||+|||+++
T Consensus 88 v~E~~~gg~L~~~i~~~~---~~~e~~~~~i~~qil~aL~~lH---~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~ 161 (444)
T 3soa_A 88 IFDLVTGGELFEDIVARE---YYSEADASHCIQQILEAVLHCH---QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAI 161 (444)
T ss_dssp EECCCBCCBHHHHHHHCS---CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCB
T ss_pred EEEeCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEeccCCCCcEEEccCceeE
Confidence 999999999999997654 3899999999999999999999 77999999999999998 46789999999998
Q ss_pred cccCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCcc
Q 012219 324 LLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPV 403 (468)
Q Consensus 324 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (468)
.............||+.|+|||++.+..++.++||||+||++|+|++|+.||.....................+.. ...
T Consensus 162 ~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~-~~~ 240 (444)
T 3soa_A 162 EVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEW-DTV 240 (444)
T ss_dssp CCCTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCTTTT-TTS
T ss_pred EecCCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCCCCcccc-ccC
Confidence 7765544445568999999999999999999999999999999999999999754322111110000011111111 111
Q ss_pred chhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 404 DQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 404 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
+ . .+.+++.+||+.||++|||+.+++++
T Consensus 241 s----~---~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 241 T----P---EAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp C----H---HHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred C----H---HHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 1 1 26679999999999999999999864
No 37
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.7e-45 Score=354.76 Aligned_cols=253 Identities=23% Similarity=0.329 Sum_probs=196.9
Q ss_pred hhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLI 247 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 247 (468)
.++|.+.+.||+|+||+||+|.. .+|+.||||++....... ..+.+.+|++++++++||||+++++++...+..++|
T Consensus 9 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~--~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv 86 (347)
T 3zgw_A 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGS--DLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMV 86 (347)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC-----CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccch--HHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEE
Confidence 46899999999999999999974 679999999997655432 235688999999999999999999999999999999
Q ss_pred EEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccC
Q 012219 248 YEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNF 327 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~ 327 (468)
|||+++|+|.+++.... .+++.++..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||++.....
T Consensus 87 ~E~~~gg~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~ 160 (347)
T 3zgw_A 87 LEYCPGGELFDYIISQD---RLSEEETRVVFRQIVSAVAYVH---SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKG 160 (347)
T ss_dssp EECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBC---
T ss_pred EeCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCccHHHEEEcCCCCEEEEeccCcccccC
Confidence 99999999999997543 3899999999999999999999 77999999999999999999999999999876543
Q ss_pred CC-CCceeccccccccccccccCCCC-CccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccch
Q 012219 328 DS-SNRTLLAGTYGYIAPELAYTMVV-TEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQ 405 (468)
Q Consensus 328 ~~-~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (468)
.. .......||+.|+|||++.+..+ +.++||||+||++|||++|+.||.............. . ........+.
T Consensus 161 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~--~---~~~~p~~~s~ 235 (347)
T 3zgw_A 161 NKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMR--G---KYDVPKWLSP 235 (347)
T ss_dssp -----------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH--T---CCCCCTTCCH
T ss_pred CCCccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHc--C---CCCCCCCCCH
Confidence 22 22344679999999999988775 8899999999999999999999975432211110000 0 1111111111
Q ss_pred hHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH-HHh
Q 012219 406 KIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE-FIA 441 (468)
Q Consensus 406 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~-l~~ 441 (468)
.+.+++.+||+.||++|||++|++++ |..
T Consensus 236 -------~~~~li~~~L~~dP~~Rps~~eil~hp~~~ 265 (347)
T 3zgw_A 236 -------SSILLLQQMLQVDPKKRISMKNLLNHPWIM 265 (347)
T ss_dssp -------HHHHHHHHHTCSSGGGSCCHHHHHTCHHHH
T ss_pred -------HHHHHHHHHcccCHhHCcCHHHHhcCcchh
Confidence 15678999999999999999999954 443
No 38
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.8e-44 Score=347.09 Aligned_cols=267 Identities=22% Similarity=0.299 Sum_probs=209.7
Q ss_pred hCccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCC--EEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRK--CMFL 246 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~~~l 246 (468)
++|.+.+.||+|+||.||+|... +++.||||++...... ...+.+.+|++++++++||||+++++++.... ..++
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 86 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFL--RPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVL 86 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGG--SCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEecccccc--chHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEE
Confidence 57899999999999999999764 5899999999754432 23567889999999999999999999998755 7899
Q ss_pred EEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee----CCCCCeEEeecccc
Q 012219 247 IYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLL----NSELEAFVADFGVA 322 (468)
Q Consensus 247 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll----~~~~~~kl~Dfg~~ 322 (468)
||||+++|+|.+++........+++.+++.++.||+.||+||| +.+|+||||||+||++ +.++.+||+|||++
T Consensus 87 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a 163 (319)
T 4euu_A 87 IMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA 163 (319)
T ss_dssp EEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEECTTSCEEEEECCCTTC
T ss_pred EEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEeccCCCCceEEEccCCCc
Confidence 9999999999999987665556999999999999999999999 7799999999999999 78888999999999
Q ss_pred ccccCCCCCceecccccccccccccc--------CCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccc--
Q 012219 323 RLLNFDSSNRTLLAGTYGYIAPELAY--------TMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLI-- 392 (468)
Q Consensus 323 ~~~~~~~~~~~~~~g~~~y~aPE~~~--------~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~-- 392 (468)
+...... ......||+.|+|||++. +..++.++|||||||++|||+||+.||.................
T Consensus 164 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 242 (319)
T 4euu_A 164 RELEDDE-QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITG 242 (319)
T ss_dssp EECCTTC-CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHH
T ss_pred eecCCCC-ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcC
Confidence 8765432 333456999999999876 56789999999999999999999999964332111100000000
Q ss_pred ----------cc------cCCCCC--CccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCCC
Q 012219 393 ----------DL------LDPRLS--PPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNKA 445 (468)
Q Consensus 393 ----------~~------~~~~~~--~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~~ 445 (468)
.. ....+. ..... .....+.+++.+||+.||++|||++|++++.....-.
T Consensus 243 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~~~ 310 (319)
T 4euu_A 243 KPSGAISGVQKAENGPIDWSGDMPVSCSLSR---GLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (319)
T ss_dssp CCTTCCEEEECSTTCCEEEESSCCTTCSSCH---HHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHTC-
T ss_pred CCcccchhhhcccCCccccCccCCcccccch---hHHHHhHHHHHHhccCChhhhccHHHhhhccHHHhhc
Confidence 00 000111 11112 2333477899999999999999999999999876543
No 39
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=3.9e-45 Score=343.06 Aligned_cols=256 Identities=26% Similarity=0.406 Sum_probs=208.7
Q ss_pred hhCccccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
.++|.+.+.||+|+||.||+|...+++.||+|++...... .+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 84 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS----EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVF 84 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSBC----HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEE
T ss_pred hhhceeeheecCCCccEEEEEEecCCCeEEEEEecccccC----HHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEE
Confidence 3578999999999999999999888999999999865533 357889999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||+++|+|.+++..... .+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 85 e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 159 (269)
T 4hcu_A 85 EFMEHGCLSDYLRTQRG--LFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD 159 (269)
T ss_dssp ECCTTCBHHHHHHTTTT--CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCH
T ss_pred EeCCCCcHHHHHHhcCc--ccCHHHHHHHHHHHHHHHHHHH---hCCeecCCcchheEEEcCCCCEEecccccccccccc
Confidence 99999999999976433 4899999999999999999999 779999999999999999999999999999865321
Q ss_pred C-CCceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCCCCCCccchh
Q 012219 329 S-SNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQK 406 (468)
Q Consensus 329 ~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (468)
. .......+++.|+|||++.+..++.++||||||+++|||++ |+.||........... .............+
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~----~~~~~~~~~~~~~~-- 233 (269)
T 4hcu_A 160 QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVED----ISTGFRLYKPRLAS-- 233 (269)
T ss_dssp HHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHH----HHTTCCCCCCTTSC--
T ss_pred ccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHH----HhcCccCCCCCcCC--
Confidence 1 11223356778999999998899999999999999999999 9999976443221111 11111111111111
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCC
Q 012219 407 IRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNK 444 (468)
Q Consensus 407 ~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~ 444 (468)
. .+.+++.+||+.||++|||+.++++.|.++.+
T Consensus 234 --~---~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~ 266 (269)
T 4hcu_A 234 --T---HVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 266 (269)
T ss_dssp --H---HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --H---HHHHHHHHHccCCcccCcCHHHHHHHHHHHHH
Confidence 1 26679999999999999999999999987643
No 40
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=8.9e-45 Score=347.92 Aligned_cols=263 Identities=24% Similarity=0.310 Sum_probs=200.8
Q ss_pred hhCccccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
.++|.+.+.||+|+||+||+|+..+++.||+|++...... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 98 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAED-EGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVF 98 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC-------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEeccccc-chhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEE
Confidence 3679999999999999999999888999999999765432 233467889999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||+++ +|.+.+.... ..+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 99 e~~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~ 172 (311)
T 3niz_A 99 EFMEK-DLKKVLDENK--TGLQDSQIKIYLYQLLRGVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIP 172 (311)
T ss_dssp ECCSE-EHHHHHHTCT--TCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSC
T ss_pred cCCCC-CHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCchHhEEECCCCCEEEccCcCceecCCC
Confidence 99985 8888876543 34899999999999999999999 779999999999999999999999999999887654
Q ss_pred CCCceeccccccccccccccC-CCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhccc--------------cccc
Q 012219 329 SSNRTLLAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNI--------------KLID 393 (468)
Q Consensus 329 ~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~--------------~~~~ 393 (468)
........||+.|+|||++.+ ..++.++|||||||++|||++|+.||.............. ....
T Consensus 173 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 252 (311)
T 3niz_A 173 VRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPL 252 (311)
T ss_dssp CC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHH
T ss_pred cccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccch
Confidence 445555678999999999876 5689999999999999999999999975443211100000 0000
Q ss_pred ccCCCC---CC-ccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 394 LLDPRL---SP-PVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 394 ~~~~~~---~~-~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
..+... .. ............+.+++.+||+.||++|||++|++++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 301 (311)
T 3niz_A 253 WKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH 301 (311)
T ss_dssp HHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 000000 00 0000000011236789999999999999999999864
No 41
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=2.8e-45 Score=356.87 Aligned_cols=251 Identities=24% Similarity=0.335 Sum_probs=201.1
Q ss_pred hhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhc-cCCceeeEEEEEeeCCEEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQI-RHRNIVKLYGFCLHRKCMFL 246 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 246 (468)
.++|.+.+.||+|+||.||+|+. .+++.||+|++...........+.+.+|.+++..+ +||||+++++++.+.+..++
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 101 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF 101 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence 47899999999999999999975 46899999999876544445567788999999988 79999999999999999999
Q ss_pred EEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccccccc
Q 012219 247 IYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLN 326 (468)
Q Consensus 247 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~ 326 (468)
||||+++|+|.+++.... .+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++...
T Consensus 102 v~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~ 175 (353)
T 3txo_A 102 VMEFVNGGDLMFHIQKSR---RFDEARARFYAAEIISALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGI 175 (353)
T ss_dssp EEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSC
T ss_pred EEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCCcccCCCHHHEEECCCCCEEEccccceeecc
Confidence 999999999999997643 3899999999999999999999 7799999999999999999999999999998654
Q ss_pred CCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchh
Q 012219 327 FDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQK 406 (468)
Q Consensus 327 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (468)
.........+||+.|+|||++.+..++.++|||||||++|||++|+.||.......... .. ... ...+.....
T Consensus 176 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~-~i-~~~---~~~~p~~~~-- 248 (353)
T 3txo_A 176 CNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFE-AI-LND---EVVYPTWLH-- 248 (353)
T ss_dssp C---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH-HH-HHC---CCCCCTTSC--
T ss_pred cCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHH-HH-HcC---CCCCCCCCC--
Confidence 44444556689999999999999899999999999999999999999997543221110 00 000 111111111
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCCH------HHHHH
Q 012219 407 IRQDIILVSTVAFSCLRSQPKSRPTM------QLVSN 437 (468)
Q Consensus 407 ~~~~~~~l~~l~~~cl~~dP~~RPs~------~~v~~ 437 (468)
. .+.+++.+||+.||++||++ +++++
T Consensus 249 --~---~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 249 --E---DATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp --H---HHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred --H---HHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 1 15678999999999999998 67764
No 42
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=4.4e-45 Score=359.65 Aligned_cols=256 Identities=23% Similarity=0.343 Sum_probs=202.4
Q ss_pred hhCccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhc-cCCceeeEEEEEeeCCEEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQI-RHRNIVKLYGFCLHRKCMFL 246 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 246 (468)
.++|.+.+.||+|+||.||+|+.. +++.||+|+++..........+.+.+|..++.++ +||||+++++++.+.+..++
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 467999999999999999999754 6889999999876544333445678899999887 89999999999999999999
Q ss_pred EEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccccccc
Q 012219 247 IYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLN 326 (468)
Q Consensus 247 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~ 326 (468)
||||+++|+|..++.... .+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++...
T Consensus 131 V~E~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~ 204 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQR---KLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 204 (396)
T ss_dssp EEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred EEEcCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEECCCCCEEEeecceeeecc
Confidence 999999999999997643 3899999999999999999999 7799999999999999999999999999998654
Q ss_pred CCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhc-cccc-ccc--cCCCCCCc
Q 012219 327 FDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDK-NIKL-IDL--LDPRLSPP 402 (468)
Q Consensus 327 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~-~~~~-~~~--~~~~~~~~ 402 (468)
.........+||+.|+|||++.+..++.++|||||||++|||++|+.||............ .... ..+ ....++..
T Consensus 205 ~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~ 284 (396)
T 4dc2_A 205 RPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRS 284 (396)
T ss_dssp CTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCCCCTT
T ss_pred cCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccCCCCc
Confidence 4445556678999999999999999999999999999999999999999643221110000 0000 000 11112222
Q ss_pred cchhHHHHHHHHHHHHHhcccCCCCCCCCH------HHHHH
Q 012219 403 VDQKIRQDIILVSTVAFSCLRSQPKSRPTM------QLVSN 437 (468)
Q Consensus 403 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~------~~v~~ 437 (468)
.+. .+.+++.+||+.||++||++ +++++
T Consensus 285 ~s~-------~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~ 318 (396)
T 4dc2_A 285 LSV-------KAASVLKSFLNKDPKERLGCHPQTGFADIQG 318 (396)
T ss_dssp SCH-------HHHHHHHHHTCSCTTTSTTCSTTTHHHHHHH
T ss_pred CCH-------HHHHHHHHHhcCCHhHcCCCCCCCCHHHHhc
Confidence 221 26678999999999999985 56664
No 43
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=1.5e-45 Score=362.79 Aligned_cols=258 Identities=25% Similarity=0.362 Sum_probs=206.7
Q ss_pred hhCccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLI 247 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 247 (468)
.++|.+.+.||+|+||.||+|... +++.||||+++..... ...+.|.+|++++++++||||+++++++...+..++|
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 190 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPP--DLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIV 190 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCH--HHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCH--HHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEE
Confidence 467999999999999999999875 7899999999755322 2345788999999999999999999999998899999
Q ss_pred EEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccC
Q 012219 248 YEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNF 327 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~ 327 (468)
|||+++|+|.+++.... ..+++..++.++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++....
T Consensus 191 ~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~ 265 (377)
T 3cbl_A 191 MELVQGGDFLTFLRTEG--ARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEAD 265 (377)
T ss_dssp EECCTTCBHHHHHHHHG--GGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEECTT
T ss_pred EEcCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHH---HCCcCCcccCHHHEEEcCCCcEEECcCCCceecCC
Confidence 99999999999997543 23889999999999999999999 77999999999999999999999999999976432
Q ss_pred CCCC--ceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCCCCCCccc
Q 012219 328 DSSN--RTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVD 404 (468)
Q Consensus 328 ~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (468)
.... .....++..|+|||++....++.++|||||||++|||+| |+.||........... .............+
T Consensus 266 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~----~~~~~~~~~~~~~~ 341 (377)
T 3cbl_A 266 GVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREF----VEKGGRLPCPELCP 341 (377)
T ss_dssp SEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHH----HHTTCCCCCCTTCC
T ss_pred CceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH----HHcCCCCCCCCCCC
Confidence 1111 111235678999999998899999999999999999998 9999976543211110 00000111111111
Q ss_pred hhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCC
Q 012219 405 QKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNK 444 (468)
Q Consensus 405 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~ 444 (468)
. .+.+++.+||+.||++|||++++++.|+.+.+
T Consensus 342 ----~---~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~ 374 (377)
T 3cbl_A 342 ----D---AVFRLMEQCWAYEPGQRPSFSTIYQELQSIRK 374 (377)
T ss_dssp ----H---HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ----H---HHHHHHHHHcCCCchhCcCHHHHHHHHHHHHh
Confidence 1 26779999999999999999999999987643
No 44
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=1.6e-44 Score=352.40 Aligned_cols=255 Identities=22% Similarity=0.298 Sum_probs=204.1
Q ss_pred hhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhh---hhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEEL---ASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCM 244 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 244 (468)
.++|.+.+.||+|+||.||+|.. .+|+.||+|++........ ...+.+.+|++++++++||||+++++++.+....
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 36799999999999999999975 4689999999976543211 1246788999999999999999999999999999
Q ss_pred EEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCC----CeEEeecc
Q 012219 245 FLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSEL----EAFVADFG 320 (468)
Q Consensus 245 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~----~~kl~Dfg 320 (468)
++||||+++|+|.+++.... .+++..+..++.||+.||.||| +.+|+||||||+||+++.++ .+||+|||
T Consensus 91 ~lv~e~~~gg~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~~~vkl~DFG 164 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQKE---SLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFG 164 (361)
T ss_dssp EEEEECCCSCBHHHHHTTCS---CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECCCS
T ss_pred EEEEEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEeCCCCCccCEEEEecC
Confidence 99999999999999997543 4899999999999999999999 77999999999999998877 79999999
Q ss_pred ccccccCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCC
Q 012219 321 VARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLS 400 (468)
Q Consensus 321 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (468)
+++..... .......||+.|+|||++.+..++.++|||||||++|+|++|+.||........... +.. ....+.
T Consensus 165 ~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~----i~~-~~~~~~ 238 (361)
T 2yab_A 165 LAHEIEDG-VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN----ITA-VSYDFD 238 (361)
T ss_dssp SCEECCTT-CCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHH----HHT-TCCCCC
T ss_pred CceEcCCC-CccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHH----HHh-cCCCCC
Confidence 99876532 233445799999999999998999999999999999999999999975432211100 000 000111
Q ss_pred CccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 401 PPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 401 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
....... ...+.+++.+||..||++|||+.+++++
T Consensus 239 ~~~~~~~---s~~~~~li~~~L~~dP~~R~t~~e~l~h 273 (361)
T 2yab_A 239 EEFFSQT---SELAKDFIRKLLVKETRKRLTIQEALRH 273 (361)
T ss_dssp HHHHTTS---CHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred chhccCC---CHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 1100111 1226679999999999999999998853
No 45
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=3.3e-45 Score=358.15 Aligned_cols=268 Identities=22% Similarity=0.332 Sum_probs=211.6
Q ss_pred CHHHHHHHhhCccccceeeeeCCceEEEEEc------CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhc-cCCceee
Q 012219 161 TFQDMIEATEDFHIKYCIGTGGYGSVYRARL------PSGKVVALKKLHRSETEELASLESFGNEARLLSQI-RHRNIVK 233 (468)
Q Consensus 161 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~ 233 (468)
...++....++|.+.+.||+|+||.||+|++ .+++.||||+++..... ...+.+.+|++++.++ +||||++
T Consensus 13 ~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~~hpniv~ 90 (359)
T 3vhe_A 13 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH--SEHRALMSELKILIHIGHHLNVVN 90 (359)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCH--HHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred CcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCH--HHHHHHHHHHHHHHhhcCCcceee
Confidence 4455556678999999999999999999963 35689999999865433 2356789999999999 7999999
Q ss_pred EEEEEeeCCE-EEEEEEeccCCChhhhhhcCcc-----------------------------------------------
Q 012219 234 LYGFCLHRKC-MFLIYEYMEMGSLFCVLRTDEE----------------------------------------------- 265 (468)
Q Consensus 234 l~~~~~~~~~-~~lv~e~~~~gsL~~~l~~~~~----------------------------------------------- 265 (468)
+++++...+. .++||||+++|+|.+++.....
T Consensus 91 ~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (359)
T 3vhe_A 91 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEE 170 (359)
T ss_dssp EEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-----------------------------------------
T ss_pred eeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccc
Confidence 9999987544 8999999999999999976432
Q ss_pred ----------------cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCC
Q 012219 266 ----------------AVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDS 329 (468)
Q Consensus 266 ----------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~ 329 (468)
...+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 171 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~ 247 (359)
T 3vhe_A 171 KSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 247 (359)
T ss_dssp -------------CTTTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCT
T ss_pred cccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEEcCCCcEEEEeccceeeecccc
Confidence 112889999999999999999999 7799999999999999999999999999998764332
Q ss_pred C--CceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCCCCCCccchh
Q 012219 330 S--NRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQK 406 (468)
Q Consensus 330 ~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (468)
. ......||+.|+|||++.+..++.++|||||||++|||+| |+.||............. .............
T Consensus 248 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~---~~~~~~~~~~~~~-- 322 (359)
T 3vhe_A 248 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL---KEGTRMRAPDYTT-- 322 (359)
T ss_dssp TCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHH---HHTCCCCCCTTCC--
T ss_pred cchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHH---HcCCCCCCCCCCC--
Confidence 2 2233567889999999999999999999999999999998 999997544322111110 0111111111111
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcC
Q 012219 407 IRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARN 443 (468)
Q Consensus 407 ~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~ 443 (468)
. .+.+++.+||+.||++|||+.+++++|+...
T Consensus 323 --~---~l~~li~~~l~~dP~~Rps~~ell~~L~~~~ 354 (359)
T 3vhe_A 323 --P---EMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 354 (359)
T ss_dssp --H---HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --H---HHHHHHHHHccCChhhCCCHHHHHHHHHHHH
Confidence 1 2677899999999999999999999998753
No 46
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=6.6e-45 Score=357.36 Aligned_cols=257 Identities=26% Similarity=0.394 Sum_probs=196.2
Q ss_pred hCccccceeeeeCCceEEEEEcC----CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLP----SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMF 245 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 245 (468)
++|.+.+.||+|+||.||+|+.. ++..||||+++..... ...+.|.+|++++++++||||+++++++...+..+
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 122 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE--KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVM 122 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCH--HHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCE
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCH--HHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceE
Confidence 57899999999999999999764 5778999999765432 24568999999999999999999999999999999
Q ss_pred EEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccc
Q 012219 246 LIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLL 325 (468)
Q Consensus 246 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~ 325 (468)
+||||+++|+|.++++... ..+++.+++.++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 123 lv~e~~~~~sL~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 197 (373)
T 2qol_A 123 IVTEYMENGSLDSFLRKHD--AQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLGRVL 197 (373)
T ss_dssp EEEECCTTCBHHHHHHTTT--TCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC------
T ss_pred EEEeCCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEEcCCCCEEECcCcccccc
Confidence 9999999999999997643 34899999999999999999999 779999999999999999999999999999876
Q ss_pred cCCCCCc---eeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCCCCCC
Q 012219 326 NFDSSNR---TLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDPRLSP 401 (468)
Q Consensus 326 ~~~~~~~---~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (468)
....... ....++..|+|||++.+..++.++|||||||++|||++ |+.||........... ...........
T Consensus 198 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~----i~~~~~~~~~~ 273 (373)
T 2qol_A 198 EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKA----VDEGYRLPPPM 273 (373)
T ss_dssp ----------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHH----HHTTEECCCCT
T ss_pred ccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH----HHcCCCCCCCc
Confidence 5332211 12235678999999999999999999999999999998 9999975433211110 00000011111
Q ss_pred ccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCC
Q 012219 402 PVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNK 444 (468)
Q Consensus 402 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~ 444 (468)
... ..+.+++.+||+.||++||++.+|++.|.+...
T Consensus 274 ~~~-------~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~ 309 (373)
T 2qol_A 274 DCP-------AALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 309 (373)
T ss_dssp TCB-------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ccc-------HHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHh
Confidence 111 226789999999999999999999999987643
No 47
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=4e-44 Score=342.68 Aligned_cols=262 Identities=23% Similarity=0.402 Sum_probs=201.7
Q ss_pred hhCccccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
.++|.+.+.||+|+||.||+|...+ .+|+|+++..... ....+.|.+|++++++++||||+++++++.. +..++||
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~~--~~avk~~k~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~lv~ 110 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPT-PEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVT 110 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESSS--EEEEEECCCSSCC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEE
T ss_pred ccceEEEeEecCCCCeEEEEEEECC--EEEEEEEecCCCC-HHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc-CcEEEEE
Confidence 3679999999999999999998743 5899988764432 2345789999999999999999999998764 4578999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccC-
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNF- 327 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~- 327 (468)
||+++|+|.+++.... ..+++.+++.++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 111 e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~ 185 (307)
T 3lb7_A 111 QWCEGSSLYKHLHVQE--TKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRW 185 (307)
T ss_dssp ECCSSCBHHHHHHTSC--CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCSSSEEECTTSCEEECCCCSSCC----
T ss_pred ecCCCCcHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHH---hCCEeeCCCChhhEEEcCCCCEEEccCCCceecccc
Confidence 9999999999997543 34899999999999999999999 77999999999999999999999999999976532
Q ss_pred -CCCCceecccccccccccccc---CCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCcc
Q 012219 328 -DSSNRTLLAGTYGYIAPELAY---TMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPV 403 (468)
Q Consensus 328 -~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (468)
.........||+.|+|||++. +..++.++|||||||++|||+||+.||.............. .....+.+....
T Consensus 186 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~--~~~~~~~~~~~~ 263 (307)
T 3lb7_A 186 SGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVG--RGYASPDLSKLY 263 (307)
T ss_dssp --------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHH--HTCCCCCSTTSC
T ss_pred cccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHHHHHh--cCCCCcchhhhh
Confidence 122233457999999999886 56788999999999999999999999976543221111000 011111111111
Q ss_pred chhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCCC
Q 012219 404 DQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNKA 445 (468)
Q Consensus 404 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~~ 445 (468)
... ...+.+++.+||+.||++||++.++++.|+.....
T Consensus 264 ~~~----~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~ 301 (307)
T 3lb7_A 264 KNC----PKAMKRLVADCVKKVKEERPLFPQILSSIELLQHS 301 (307)
T ss_dssp SSS----CHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTT
T ss_pred cCC----cHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhh
Confidence 111 12267899999999999999999999999887554
No 48
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-44 Score=348.42 Aligned_cols=252 Identities=25% Similarity=0.305 Sum_probs=203.4
Q ss_pred hhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLI 247 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 247 (468)
.++|.+.+.||+|+||.||+|.. .+++.+|+|.+..... ....+.+|+++++.++||||+++++++.+.+..++|
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~----~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv 79 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGT----DQVLVKKEISILNIARHRNILHLHESFESMEELVMI 79 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTH----HHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEE
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCcc----cHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEE
Confidence 36799999999999999999975 4688999999975543 235688999999999999999999999999999999
Q ss_pred EEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCC--CCCeEEeeccccccc
Q 012219 248 YEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNS--ELEAFVADFGVARLL 325 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~--~~~~kl~Dfg~~~~~ 325 (468)
|||+++|+|.+++.... ..+++.+++.++.||+.||.||| +.+|+||||||+||+++. ++.+||+|||+++..
T Consensus 80 ~e~~~g~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH---~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~ 154 (321)
T 1tki_A 80 FEFISGLDIFERINTSA--FELNEREIVSYVHQVCEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQL 154 (321)
T ss_dssp ECCCCCCBHHHHHTSSS--CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCTTCEEC
T ss_pred EEeCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeEC
Confidence 99999999999997543 34899999999999999999999 779999999999999987 789999999999876
Q ss_pred cCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccch
Q 012219 326 NFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQ 405 (468)
Q Consensus 326 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (468)
.. ........||+.|+|||++.+..++.++|||||||++|+|++|+.||.......... .+........ ..
T Consensus 155 ~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~-------~i~~~~~~~~-~~ 225 (321)
T 1tki_A 155 KP-GDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIE-------NIMNAEYTFD-EE 225 (321)
T ss_dssp CT-TCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH-------HHHHTCCCCC-HH
T ss_pred CC-CCccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHH-------HHHcCCCCCC-hh
Confidence 53 233445679999999999998889999999999999999999999997543221110 0000111100 00
Q ss_pred hHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 406 KIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 406 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
........+.+++.+||+.||++|||+.|++++
T Consensus 226 ~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~h 258 (321)
T 1tki_A 226 AFKEISIEAMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp HHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred hhccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 000111236789999999999999999999854
No 49
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=9.4e-45 Score=352.31 Aligned_cols=255 Identities=24% Similarity=0.351 Sum_probs=204.0
Q ss_pred hCccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhc-cCCceeeEEEEEeeCCEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQI-RHRNIVKLYGFCLHRKCMFLI 247 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 247 (468)
++|.+.+.||+|+||.||+|+.. +++.||+|++...........+.+.+|..++.++ +||||+++++++.+.+..++|
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 57999999999999999999764 6889999999866544334566788999999988 899999999999999999999
Q ss_pred EEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccC
Q 012219 248 YEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNF 327 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~ 327 (468)
|||+++|+|.+++.... .+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 89 ~e~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~ 162 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQRQR---KLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 162 (345)
T ss_dssp ECCCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCC
T ss_pred EeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEEeccccccccC
Confidence 99999999999997543 3899999999999999999999 77999999999999999999999999999986544
Q ss_pred CCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhh-hcccccc-cc--cCCCCCCcc
Q 012219 328 DSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSL-DKNIKLI-DL--LDPRLSPPV 403 (468)
Q Consensus 328 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~-~~~~~~~-~~--~~~~~~~~~ 403 (468)
........+||+.|+|||++.+..++.++|||||||++|||++|+.||.......... ....... .+ ....++...
T Consensus 163 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~ 242 (345)
T 3a8x_A 163 PGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSL 242 (345)
T ss_dssp TTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCCCCTTS
T ss_pred CCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCCCCCCC
Confidence 4444556689999999999999999999999999999999999999997532211000 0000000 00 011122212
Q ss_pred chhHHHHHHHHHHHHHhcccCCCCCCCCH------HHHHH
Q 012219 404 DQKIRQDIILVSTVAFSCLRSQPKSRPTM------QLVSN 437 (468)
Q Consensus 404 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~------~~v~~ 437 (468)
+. .+.+++.+||+.||++||++ +++++
T Consensus 243 s~-------~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~ 275 (345)
T 3a8x_A 243 SV-------KAASVLKSFLNKDPKERLGCHPQTGFADIQG 275 (345)
T ss_dssp CH-------HHHHHHHHHTCSSTTTSTTCCTTTHHHHHHT
T ss_pred CH-------HHHHHHHHHhcCCHhHCCCCCCcCCHHHHhc
Confidence 21 26678999999999999995 67764
No 50
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=1.3e-44 Score=349.75 Aligned_cols=252 Identities=20% Similarity=0.335 Sum_probs=200.7
Q ss_pred hhCccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCC-----
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRK----- 242 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----- 242 (468)
.++|++.+.||+|+||.||+|+.. +++.||||++...... ...+.+.+|++++++++||||+++++++.+..
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 82 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRE--LAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQ 82 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTT--THHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCch--hHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhh
Confidence 467999999999999999999865 7999999999755432 23567899999999999999999999986543
Q ss_pred ----------------------------------------------------EEEEEEEeccCCChhhhhhcCcccCCCC
Q 012219 243 ----------------------------------------------------CMFLIYEYMEMGSLFCVLRTDEEAVGLD 270 (468)
Q Consensus 243 ----------------------------------------------------~~~lv~e~~~~gsL~~~l~~~~~~~~l~ 270 (468)
..++||||+++|+|.+++.........+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~ 162 (332)
T 3qd2_B 83 EEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDRE 162 (332)
T ss_dssp HHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSC
T ss_pred hhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchh
Confidence 3799999999999999998876656678
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCC------------CCceecccc
Q 012219 271 WAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDS------------SNRTLLAGT 338 (468)
Q Consensus 271 ~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~------------~~~~~~~g~ 338 (468)
+..++.++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++...... .......||
T Consensus 163 ~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt 239 (332)
T 3qd2_B 163 HGVCLHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGT 239 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-C
T ss_pred hHHHHHHHHHHHHHHHHHH---hCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCC
Confidence 8889999999999999999 7799999999999999999999999999998775432 122334699
Q ss_pred ccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHHHHHHHHHHHH
Q 012219 339 YGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQDIILVSTVA 418 (468)
Q Consensus 339 ~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 418 (468)
+.|+|||++.+..++.++|||||||++|||++|..|+...... .......... .........+.+++
T Consensus 240 ~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~~~---------~~~~~~~~~~----~~~~~~~~~~~~li 306 (332)
T 3qd2_B 240 KLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVRI---------ITDVRNLKFP----LLFTQKYPQEHMMV 306 (332)
T ss_dssp GGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHHHH---------HHHHHTTCCC----HHHHHHCHHHHHHH
T ss_pred cCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHHHH---------HHHhhccCCC----cccccCChhHHHHH
Confidence 9999999999999999999999999999999998875321110 0001111111 11122223467899
Q ss_pred HhcccCCCCCCCCHHHHHHH
Q 012219 419 FSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 419 ~~cl~~dP~~RPs~~~v~~~ 438 (468)
.+||+.||++|||+.+++++
T Consensus 307 ~~~l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 307 QDMLSPSPTERPEATDIIEN 326 (332)
T ss_dssp HHHHCSSGGGSCCHHHHHHS
T ss_pred HHHccCCCCcCCCHHHHhhc
Confidence 99999999999999999864
No 51
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=1.2e-44 Score=348.76 Aligned_cols=253 Identities=27% Similarity=0.405 Sum_probs=200.4
Q ss_pred hhCccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLI 247 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 247 (468)
.++|.+.+.||+|+||.||+|... +++.||||++....... ..+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv 83 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD--CPENIKKEICINKMLNHENVVKFYGHRREGNIQYLF 83 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC---------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccc--hHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 368999999999999999999754 78999999997554332 235688999999999999999999999999999999
Q ss_pred EEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccC
Q 012219 248 YEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNF 327 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~ 327 (468)
|||+++|+|.+++.... .+++.++..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++.+..
T Consensus 84 ~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 157 (323)
T 3tki_A 84 LEYCSGGELFDRIEPDI---GMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRY 157 (323)
T ss_dssp EECCTTEEGGGGSBTTT---BCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEE
T ss_pred EEcCCCCcHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCccccccchHHEEEeCCCCEEEEEeeccceecc
Confidence 99999999999997543 3899999999999999999999 77999999999999999999999999999986542
Q ss_pred CC--CCceeccccccccccccccCCCC-CccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccc
Q 012219 328 DS--SNRTLLAGTYGYIAPELAYTMVV-TEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVD 404 (468)
Q Consensus 328 ~~--~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (468)
.. .......||+.|+|||++.+..+ +.++|||||||++|||++|+.||.................... ...
T Consensus 158 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~-----~~~- 231 (323)
T 3tki_A 158 NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL-----NPW- 231 (323)
T ss_dssp TTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTTS-----TTG-
T ss_pred CCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccccC-----Ccc-
Confidence 22 22334579999999999987765 7789999999999999999999975443222111111100000 111
Q ss_pred hhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 405 QKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 405 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
..... .+.+++.+||+.||++|||++|++++
T Consensus 232 ~~~~~---~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 232 KKIDS---APLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp GGSCH---HHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ccCCH---HHHHHHHHHccCChhhCcCHHHHhhC
Confidence 11111 25679999999999999999999854
No 52
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=1.2e-44 Score=343.37 Aligned_cols=262 Identities=26% Similarity=0.351 Sum_probs=198.5
Q ss_pred hCccccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYE 249 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 249 (468)
++|.+.+.||+|+||.||+|+..+++.||+|++....... ...+.+.+|++++++++||||+++++++...+..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDE-GIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFE 80 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGG-CCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEecccccc-ccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEE
Confidence 4788999999999999999988889999999997654332 234678899999999999999999999999999999999
Q ss_pred eccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCC
Q 012219 250 YMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDS 329 (468)
Q Consensus 250 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~ 329 (468)
|+++ +|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 81 ~~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 154 (288)
T 1ob3_A 81 HLDQ-DLKKLLDVCE--GGLESVTAKSFLLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPV 154 (288)
T ss_dssp CCSE-EHHHHHHTST--TCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC--
T ss_pred ecCC-CHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEeECccccccCccc
Confidence 9985 8998887543 24889999999999999999999 7799999999999999999999999999998765443
Q ss_pred CCceeccccccccccccccC-CCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcc-----------ccc--cccc
Q 012219 330 SNRTLLAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKN-----------IKL--IDLL 395 (468)
Q Consensus 330 ~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~-----------~~~--~~~~ 395 (468)
.......||+.|+|||++.+ ..++.++|||||||++|||+||+.||............. ... ....
T Consensus 155 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (288)
T 1ob3_A 155 RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKY 234 (288)
T ss_dssp -------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTC
T ss_pred cccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhccccc
Confidence 44445578999999999876 458999999999999999999999997543221100000 000 0001
Q ss_pred CCCCCC----ccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 396 DPRLSP----PVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 396 ~~~~~~----~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
++.... +...........+.+++.+||+.||++|||+++++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 281 (288)
T 1ob3_A 235 DPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (288)
T ss_dssp CTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 111110 0000000011226689999999999999999999853
No 53
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.3e-44 Score=342.99 Aligned_cols=252 Identities=22% Similarity=0.297 Sum_probs=195.4
Q ss_pred hhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhh-----------------------hhhHHHHHHHHHHHh
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEE-----------------------LASLESFGNEARLLS 224 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-----------------------~~~~~~~~~e~~~l~ 224 (468)
.++|.+.+.||+|+||.||+|.. .+++.||||++....... ....+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 36799999999999999999975 568899999997654221 112356889999999
Q ss_pred hccCCceeeEEEEEee--CCEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCC
Q 012219 225 QIRHRNIVKLYGFCLH--RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDIS 302 (468)
Q Consensus 225 ~l~h~niv~l~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk 302 (468)
+++||||+++++++.. ....++||||+++++|.+++.. ..+++.+++.++.||+.||+||| +.+|+|||||
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlk 164 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL----KPLSEDQARFYFQDLIKGIEYLH---YQKIIHRDIK 164 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS----SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCC
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCC
Confidence 9999999999999986 5689999999999999886543 34899999999999999999999 7799999999
Q ss_pred CCceeeCCCCCeEEeeccccccccCCCCCceeccccccccccccccCCC---CCccchhhHHHHHHHHHHhCCCCCCccc
Q 012219 303 SNNVLLNSELEAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMV---VTEKCDVYSFGVVALEVLMGKHPGELLS 379 (468)
Q Consensus 303 ~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~---~~~~~Dv~s~Gvil~el~tg~~p~~~~~ 379 (468)
|+||+++.++.+||+|||+++.............||+.|+|||++.+.. ++.++|||||||++|||++|+.||....
T Consensus 165 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~ 244 (298)
T 2zv2_A 165 PSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER 244 (298)
T ss_dssp GGGEEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred HHHEEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCcc
Confidence 9999999999999999999987754444344567999999999987654 4788999999999999999999997543
Q ss_pred ccchhhhcccccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 012219 380 SSSWSLDKNIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSN 437 (468)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~ 437 (468)
.......... ............ + .+.+++.+||+.||++|||+.++++
T Consensus 245 ~~~~~~~~~~---~~~~~~~~~~~~----~---~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 245 IMCLHSKIKS---QALEFPDQPDIA----E---DLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp HHHHHHHHHH---CCCCCCSSSCCC----H---HHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred HHHHHHHHhc---ccCCCCCccccC----H---HHHHHHHHHhhcChhhCCCHHHHhc
Confidence 2211110000 000000011111 1 2667999999999999999999875
No 54
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=3.6e-44 Score=344.27 Aligned_cols=249 Identities=28% Similarity=0.435 Sum_probs=205.6
Q ss_pred hhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLI 247 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 247 (468)
.++|.+.+.||+|+||.||+|+. .+|+.||+|++...........+.+.+|..+++.++||||+++++++.+....++|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 36799999999999999999975 47999999999865544444567788999999999999999999999999999999
Q ss_pred EEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccC
Q 012219 248 YEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNF 327 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~ 327 (468)
|||+++|+|.+++.... .+++..+..++.||+.||.||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 85 ~e~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~ 158 (318)
T 1fot_A 85 MDYIEGGELFSLLRKSQ---RFPNPVAKFYAAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD 158 (318)
T ss_dssp ECCCCSCBHHHHHHHTS---SCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECTTSCEEECCCSSCEECSS
T ss_pred EeCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChheEEEcCCCCEEEeecCcceecCC
Confidence 99999999999997644 3899999999999999999999 88999999999999999999999999999987542
Q ss_pred CCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhH
Q 012219 328 DSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKI 407 (468)
Q Consensus 328 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (468)
......||+.|+|||++.+..++.++|||||||++|||++|+.||......... .. +.. ....+......
T Consensus 159 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~-~~---i~~-~~~~~p~~~~~-- 228 (318)
T 1fot_A 159 ---VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTY-EK---ILN-AELRFPPFFNE-- 228 (318)
T ss_dssp ---CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHH-HH---HHH-CCCCCCTTSCH--
T ss_pred ---ccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHH-HH---HHh-CCCCCCCCCCH--
Confidence 233457999999999999999999999999999999999999999754321111 00 000 01112222221
Q ss_pred HHHHHHHHHHHHhcccCCCCCCC-----CHHHHHHH
Q 012219 408 RQDIILVSTVAFSCLRSQPKSRP-----TMQLVSNE 438 (468)
Q Consensus 408 ~~~~~~l~~l~~~cl~~dP~~RP-----s~~~v~~~ 438 (468)
.+.+++.+|++.||++|| ++++++++
T Consensus 229 -----~~~~li~~lL~~dp~~R~~~~~~~~~~i~~h 259 (318)
T 1fot_A 229 -----DVKDLLSRLITRDLSQRLGNLQNGTEDVKNH 259 (318)
T ss_dssp -----HHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred -----HHHHHHHHHhccCHHHcCCCcCCCHHHHhcC
Confidence 266789999999999999 88998843
No 55
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=3.6e-44 Score=351.95 Aligned_cols=252 Identities=24% Similarity=0.353 Sum_probs=205.0
Q ss_pred hCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
++|.+.+.||+|+||.||+|.. .+++.||+|++...........+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~ 94 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV 94 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 5799999999999999999975 468899999998765544456678899999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||+.+|+|.+++.... .+++..+..++.||+.||.||| +.+|+||||||+|||++.++.+||+|||+++....
T Consensus 95 e~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~- 167 (384)
T 4fr4_A 95 DLLLGGDLRYHLQQNV---HFKEETVKLFICELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR- 167 (384)
T ss_dssp CCCTTEEHHHHHHTTC---CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCT-
T ss_pred ecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCceeccCcHHHeEECCCCCEEEeccceeeeccC-
Confidence 9999999999997643 3899999999999999999999 77999999999999999999999999999987653
Q ss_pred CCCceeccccccccccccccC---CCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccch
Q 012219 329 SSNRTLLAGTYGYIAPELAYT---MVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQ 405 (468)
Q Consensus 329 ~~~~~~~~g~~~y~aPE~~~~---~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (468)
........||+.|+|||++.. ..++.++|||||||++|||++|+.||........... ...............+.
T Consensus 168 ~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~--~~~~~~~~~~~p~~~s~ 245 (384)
T 4fr4_A 168 ETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEI--VHTFETTVVTYPSAWSQ 245 (384)
T ss_dssp TCCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHH--HHHHHHCCCCCCTTSCH
T ss_pred CCceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHH--HHHHhhcccCCCCcCCH
Confidence 333455679999999999864 4589999999999999999999999974332211100 00000011112222221
Q ss_pred hHHHHHHHHHHHHHhcccCCCCCCCC-HHHHHH
Q 012219 406 KIRQDIILVSTVAFSCLRSQPKSRPT-MQLVSN 437 (468)
Q Consensus 406 ~~~~~~~~l~~l~~~cl~~dP~~RPs-~~~v~~ 437 (468)
.+.+++.+||+.||++||+ ++++.+
T Consensus 246 -------~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 246 -------EMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp -------HHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred -------HHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 2667999999999999999 788875
No 56
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=1.2e-44 Score=352.76 Aligned_cols=256 Identities=21% Similarity=0.258 Sum_probs=203.1
Q ss_pred hCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhh--hhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEEL--ASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFL 246 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 246 (468)
++|.+.+.||+|+||.||+|.. .+++.||||++........ ...+.+.+|+++++.++||||+++++++...+..++
T Consensus 24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 103 (351)
T 3c0i_A 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM 103 (351)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 5799999999999999999975 5789999999965432211 134678899999999999999999999999999999
Q ss_pred EEEeccCCChhhhhhcCc-ccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCC---eEEeecccc
Q 012219 247 IYEYMEMGSLFCVLRTDE-EAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELE---AFVADFGVA 322 (468)
Q Consensus 247 v~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~---~kl~Dfg~~ 322 (468)
||||+++|+|.+.+.... ....+++..+..++.||+.||.||| +.+|+||||||+||+++.++. +||+|||++
T Consensus 104 v~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a 180 (351)
T 3c0i_A 104 VFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVA 180 (351)
T ss_dssp EEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECSSSTTCCEEECCCTTC
T ss_pred EEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChHHeEEecCCCCCcEEEecCcce
Confidence 999999999988876432 2334899999999999999999999 779999999999999987654 999999999
Q ss_pred ccccCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCc
Q 012219 323 RLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPP 402 (468)
Q Consensus 323 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (468)
+.............||+.|+|||++.+..++.++|||||||++|||++|+.||.......... +........
T Consensus 181 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~--------i~~~~~~~~ 252 (351)
T 3c0i_A 181 IQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEG--------IIKGKYKMN 252 (351)
T ss_dssp EECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHHHHHH--------HHHTCCCCC
T ss_pred eEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHHHHHH--------HHcCCCCCC
Confidence 887654444455679999999999999999999999999999999999999997532211100 000001000
Q ss_pred cchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 012219 403 VDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSN 437 (468)
Q Consensus 403 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~ 437 (468)
..........+.+++.+||+.||++|||+.++++
T Consensus 253 -~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 253 -PRQWSHISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp -HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred -ccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 0000011123678999999999999999999985
No 57
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=5.4e-45 Score=346.84 Aligned_cols=264 Identities=27% Similarity=0.413 Sum_probs=202.4
Q ss_pred hCccccceeeeeCCceEEEEEc-----CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeC--C
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-----PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHR--K 242 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~ 242 (468)
++|++.+.||+|+||.||+|++ .+++.||||++...... ..+.|.+|++++++++||||+++++++... .
T Consensus 10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 86 (295)
T 3ugc_A 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE---HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 86 (295)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHH---HHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHT
T ss_pred HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHH---HHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCC
Confidence 6799999999999999999973 36889999999865433 356788999999999999999999998653 4
Q ss_pred EEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccc
Q 012219 243 CMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVA 322 (468)
Q Consensus 243 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~ 322 (468)
..++||||+++|+|.+++..... .+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++
T Consensus 87 ~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~ 161 (295)
T 3ugc_A 87 NLKLIMEYLPYGSLRDYLQKHKE--RIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLT 161 (295)
T ss_dssp SCEEEEECCTTCBHHHHHHHCGG--GCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCSC
T ss_pred ceEEEEEeCCCCCHHHHHHhccc--ccCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHhhEEEcCCCeEEEccCccc
Confidence 58999999999999999976543 3899999999999999999999 779999999999999999999999999999
Q ss_pred ccccCCCC---CceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhc--------cccc
Q 012219 323 RLLNFDSS---NRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDK--------NIKL 391 (468)
Q Consensus 323 ~~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~--------~~~~ 391 (468)
+....... ......++..|+|||.+.+..++.++||||||+++|||+||..|+............ ....
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (295)
T 3ugc_A 162 KVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 241 (295)
T ss_dssp C-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHH
T ss_pred ccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHH
Confidence 87643322 122345677899999999999999999999999999999999998643221000000 0000
Q ss_pred ccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCC
Q 012219 392 IDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNK 444 (468)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~ 444 (468)
.+.+......+...... ..+.+++.+||+.||++|||+.++++.|.++..
T Consensus 242 ~~~~~~~~~~~~~~~~~---~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~ 291 (295)
T 3ugc_A 242 IELLKNNGRLPRPDGCP---DEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 291 (295)
T ss_dssp HHHHHTTCCCCCCTTCC---HHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHhccCcCCCCcCcC---HHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence 11111111111111111 227789999999999999999999999987654
No 58
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=8.7e-45 Score=352.07 Aligned_cols=251 Identities=23% Similarity=0.386 Sum_probs=205.2
Q ss_pred HhhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhc-cCCceeeEEEEEeeCCEEE
Q 012219 168 ATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQI-RHRNIVKLYGFCLHRKCMF 245 (468)
Q Consensus 168 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 245 (468)
..++|.+.+.||+|+||.||+|+. .+++.||+|+++..........+.+..|.+++..+ +||||+++++++.+.+..+
T Consensus 15 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~ 94 (345)
T 1xjd_A 15 KIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLF 94 (345)
T ss_dssp -CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEE
Confidence 457899999999999999999976 46899999999865443334456788899999887 8999999999999999999
Q ss_pred EEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccc
Q 012219 246 LIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLL 325 (468)
Q Consensus 246 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~ 325 (468)
+||||+++|+|.+++.... .+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 95 lv~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~ 168 (345)
T 1xjd_A 95 FVMEYLNGGDLMYHIQSCH---KFDLSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKEN 168 (345)
T ss_dssp EEEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCChhhEEECCCCCEEEeEChhhhhc
Confidence 9999999999999997643 3899999999999999999999 779999999999999999999999999999865
Q ss_pred cCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccch
Q 012219 326 NFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQ 405 (468)
Q Consensus 326 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (468)
..........+||+.|+|||++.+..++.++|||||||++|||++|+.||......... .. .. .-.+.+.....
T Consensus 169 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~-~~-i~---~~~~~~p~~~s- 242 (345)
T 1xjd_A 169 MLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELF-HS-IR---MDNPFYPRWLE- 242 (345)
T ss_dssp CCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH-HH-HH---HCCCCCCTTSC-
T ss_pred ccCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHH-HH-HH---hCCCCCCcccC-
Confidence 44444455678999999999999999999999999999999999999999754322111 00 00 01112222122
Q ss_pred hHHHHHHHHHHHHHhcccCCCCCCCCHH-HHH
Q 012219 406 KIRQDIILVSTVAFSCLRSQPKSRPTMQ-LVS 436 (468)
Q Consensus 406 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~-~v~ 436 (468)
. .+.+++.+||+.||++||++. +++
T Consensus 243 ---~---~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 243 ---K---EAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp ---H---HHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred ---H---HHHHHHHHHhcCCHhHcCCChHHHH
Confidence 1 266789999999999999997 775
No 59
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=3.3e-44 Score=350.97 Aligned_cols=254 Identities=23% Similarity=0.331 Sum_probs=203.9
Q ss_pred hhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLI 247 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 247 (468)
.++|.+.+.||+|+||.||+|.. .+++.||+|++....... ...+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv 106 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSA-RDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 106 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCH-HHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCH-HHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 46799999999999999999975 468999999997654322 3456788999999999999999999999999999999
Q ss_pred EEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCC---CeEEeecccccc
Q 012219 248 YEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSEL---EAFVADFGVARL 324 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~---~~kl~Dfg~~~~ 324 (468)
|||+++|+|.+++.... .+++..+..++.||+.||.||| +.+|+||||||+||+++.++ .+||+|||+++.
T Consensus 107 ~e~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~ 180 (362)
T 2bdw_A 107 FDLVTGGELFEDIVARE---FYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIE 180 (362)
T ss_dssp ECCCCSCBHHHHHTTCS---CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBC
T ss_pred EecCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEeecCcceE
Confidence 99999999999987543 3899999999999999999999 77999999999999998654 599999999987
Q ss_pred ccCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccc
Q 012219 325 LNFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVD 404 (468)
Q Consensus 325 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (468)
... ........||+.|+|||++.+..++.++|||||||++|+|++|+.||............... .........
T Consensus 181 ~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~-----~~~~~~~~~ 254 (362)
T 2bdw_A 181 VND-SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAG-----AYDYPSPEW 254 (362)
T ss_dssp CTT-CCSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT-----CCCCCTTGG
T ss_pred ecC-CcccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhC-----CCCCCcccc
Confidence 653 23334467999999999999989999999999999999999999999754322111000000 001111111
Q ss_pred hhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 405 QKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 405 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
.... ..+.+++.+||+.||++|||+.+++++
T Consensus 255 ~~~~---~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 255 DTVT---PEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp GGSC---HHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred cCCC---HHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 1111 226679999999999999999998854
No 60
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=1.7e-44 Score=341.28 Aligned_cols=255 Identities=25% Similarity=0.445 Sum_probs=205.6
Q ss_pred hhCccccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
.++|.+.+.||+|+||.||+|...++..||+|++...... .+.+.+|++++.+++||||+++++++.+.+..++||
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 98 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS----EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIIT 98 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSBC----HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEE
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCC----HHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEE
Confidence 4679999999999999999999988889999999865443 356889999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||+++|+|.+++..... .+++.+++.++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 99 e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 173 (283)
T 3gen_A 99 EYMANGCLLNYLREMRH--RFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD 173 (283)
T ss_dssp CCCTTCBHHHHHHCGGG--CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCH
T ss_pred eccCCCcHHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCccceEEEcCCCCEEEcccccccccccc
Confidence 99999999999976332 3899999999999999999999 779999999999999999999999999999865321
Q ss_pred C-CCceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCCCCCCccchh
Q 012219 329 S-SNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQK 406 (468)
Q Consensus 329 ~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (468)
. .......+++.|+|||++.+..++.++||||||+++|||+| |+.||........... ..............
T Consensus 174 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~----~~~~~~~~~~~~~~-- 247 (283)
T 3gen_A 174 EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEH----IAQGLRLYRPHLAS-- 247 (283)
T ss_dssp HHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHH----HHTTCCCCCCTTCC--
T ss_pred ccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHH----HhcccCCCCCCcCC--
Confidence 1 11122346778999999998899999999999999999998 9999976543211111 11111111111111
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcC
Q 012219 407 IRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARN 443 (468)
Q Consensus 407 ~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~ 443 (468)
+ .+.+++.+||+.||++|||++++++.|.+..
T Consensus 248 --~---~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~ 279 (283)
T 3gen_A 248 --E---KVYTIMYSCWHEKADERPTFKILLSNILDVM 279 (283)
T ss_dssp --H---HHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --H---HHHHHHHHHccCChhHCcCHHHHHHHHHHHh
Confidence 1 2667999999999999999999999998753
No 61
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.8e-44 Score=346.77 Aligned_cols=255 Identities=23% Similarity=0.313 Sum_probs=204.0
Q ss_pred hhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhh---hhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEEL---ASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCM 244 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 244 (468)
.++|.+.+.||+|+||.||+|.. .+++.||+|++........ ...+.+.+|++++++++||||+++++++......
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 35699999999999999999975 4689999999976543211 1356788999999999999999999999999999
Q ss_pred EEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCC----CeEEeecc
Q 012219 245 FLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSEL----EAFVADFG 320 (468)
Q Consensus 245 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~----~~kl~Dfg 320 (468)
++||||+++|+|.+++.... .+++.+++.++.||+.||.||| +.+|+||||||+||+++.++ .+||+|||
T Consensus 90 ~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg 163 (326)
T 2y0a_A 90 ILILELVAGGELFDFLAEKE---SLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163 (326)
T ss_dssp EEEEECCCSCBHHHHHTTSS---CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCSSSSSCCEEECCCT
T ss_pred EEEEEcCCCCCHHHHHHhcC---CcCHHHHHHHHHHHHHHHHHHH---HCCeEcCCCCHHHEEEecCCCCCCCEEEEECC
Confidence 99999999999999997543 4899999999999999999999 77999999999999999887 79999999
Q ss_pred ccccccCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCC
Q 012219 321 VARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLS 400 (468)
Q Consensus 321 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (468)
+++...... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||........... . . .......
T Consensus 164 ~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~-~---~-~~~~~~~ 237 (326)
T 2y0a_A 164 LAHKIDFGN-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN-V---S-AVNYEFE 237 (326)
T ss_dssp TCEECCTTS-CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHH-H---H-HTCCCCC
T ss_pred CCeECCCCC-ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHH-H---H-hcCCCcC
Confidence 998765332 23345799999999999989999999999999999999999999965432111100 0 0 0011111
Q ss_pred CccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 401 PPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 401 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
..... .....+.+++.+||+.||++|||+.+++++
T Consensus 238 ~~~~~---~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 238 DEYFS---NTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp HHHHT---TSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred ccccc---cCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 00000 111236689999999999999999999864
No 62
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=1.9e-44 Score=350.51 Aligned_cols=262 Identities=25% Similarity=0.375 Sum_probs=209.8
Q ss_pred HhhCccccceeeeeCCceEEEEEcC------CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeC
Q 012219 168 ATEDFHIKYCIGTGGYGSVYRARLP------SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHR 241 (468)
Q Consensus 168 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 241 (468)
..++|.+.+.||+|+||.||+|+.. +++.||||+++..... ...+.|.+|++++++++||||+++++++...
T Consensus 45 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~ 122 (343)
T 1luf_A 45 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASA--DMQADFQREAALMAEFDNPNIVKLLGVCAVG 122 (343)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCH--HHHHHHHHHHHHHHTCCCTTBCCEEEEECSS
T ss_pred cHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCH--HHHHHHHHHHHHHHhCCCCCEEEEEEEEccC
Confidence 3578999999999999999999763 3588999999865433 2456799999999999999999999999999
Q ss_pred CEEEEEEEeccCCChhhhhhcCcc---------------------cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecC
Q 012219 242 KCMFLIYEYMEMGSLFCVLRTDEE---------------------AVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRD 300 (468)
Q Consensus 242 ~~~~lv~e~~~~gsL~~~l~~~~~---------------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~d 300 (468)
+..++||||+++|+|.+++..... ...+++.+++.++.||+.||.||| +.+|+|||
T Consensus 123 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH---~~~ivH~D 199 (343)
T 1luf_A 123 KPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVHRD 199 (343)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSC
T ss_pred CceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCC
Confidence 999999999999999999976421 145899999999999999999999 77999999
Q ss_pred CCCCceeeCCCCCeEEeeccccccccCCC--CCceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCc
Q 012219 301 ISSNNVLLNSELEAFVADFGVARLLNFDS--SNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGEL 377 (468)
Q Consensus 301 lk~~NIll~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~ 377 (468)
|||+||+++.++.+||+|||+++...... .......+++.|+|||++.+..++.++||||||+++|||+| |+.||..
T Consensus 200 lkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~ 279 (343)
T 1luf_A 200 LATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYG 279 (343)
T ss_dssp CSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred CCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCC
Confidence 99999999999999999999998764322 12233567889999999998899999999999999999999 9999975
Q ss_pred ccccchhhhcccccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCCC
Q 012219 378 LSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNKA 445 (468)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~~ 445 (468)
......... ..+...+......+ ..+.+++.+||+.||++|||+.++++.|.++...
T Consensus 280 ~~~~~~~~~----~~~~~~~~~~~~~~-------~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~ 336 (343)
T 1luf_A 280 MAHEEVIYY----VRDGNILACPENCP-------LELYNLMRLCWSKLPADRPSFCSIHRILQRMCER 336 (343)
T ss_dssp SCHHHHHHH----HHTTCCCCCCTTCC-------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC-
T ss_pred CChHHHHHH----HhCCCcCCCCCCCC-------HHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhh
Confidence 443211110 00000011111111 1267799999999999999999999999987654
No 63
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=5.9e-44 Score=339.18 Aligned_cols=262 Identities=21% Similarity=0.287 Sum_probs=199.2
Q ss_pred hCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
++|.+.+.||+|+||+||+|.. .+++.||+|++....... ...+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDE-GVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVF 80 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSST-THHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcC-CcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEE
Confidence 5789999999999999999975 468999999997654332 33467889999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||+++ ++.+.+.... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 e~~~~-~l~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lH---~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 154 (292)
T 3o0g_A 81 EFCDQ-DLKKYFDSCN--GDLDPEIVKSFLFQLLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIP 154 (292)
T ss_dssp ECCSE-EHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSC
T ss_pred ecCCC-CHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecccceecCCc
Confidence 99986 5655554432 24899999999999999999999 779999999999999999999999999999887655
Q ss_pred CCCceeccccccccccccccCCC-CCccchhhHHHHHHHHHHhCCCCCCcccccchhhhccc------------cccccc
Q 012219 329 SSNRTLLAGTYGYIAPELAYTMV-VTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNI------------KLIDLL 395 (468)
Q Consensus 329 ~~~~~~~~g~~~y~aPE~~~~~~-~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~------------~~~~~~ 395 (468)
........||+.|+|||++.+.. ++.++|||||||++|||++|..|+.............. ......
T Consensus 155 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 234 (292)
T 3o0g_A 155 VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLP 234 (292)
T ss_dssp CSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGST
T ss_pred cccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccc
Confidence 55555567899999999987765 89999999999999999998888532221111100000 000000
Q ss_pred CC----CC--CCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 396 DP----RL--SPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 396 ~~----~~--~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
+. .. ..............+.+++.+||+.||++|||++|++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 283 (292)
T 3o0g_A 235 DYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp TCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred cccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 00 00 000000000011226689999999999999999999854
No 64
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=1.3e-44 Score=360.81 Aligned_cols=265 Identities=25% Similarity=0.271 Sum_probs=207.6
Q ss_pred HHHHHHHhhCccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEee
Q 012219 162 FQDMIEATEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLH 240 (468)
Q Consensus 162 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 240 (468)
+.++....++|.+.+.||+|+||+||+|+.. +++.||+|++...........+.+.+|..++..++||||+++++++.+
T Consensus 66 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 145 (437)
T 4aw2_A 66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQD 145 (437)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee
Confidence 3444455689999999999999999999865 578999999976544333334458899999999999999999999999
Q ss_pred CCEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecc
Q 012219 241 RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFG 320 (468)
Q Consensus 241 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 320 (468)
.+..++||||+++|+|.+++.... ..+++..+..++.||+.||.||| +.+|+||||||+|||++.++.+||+|||
T Consensus 146 ~~~~~lV~Ey~~gg~L~~~l~~~~--~~l~e~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILl~~~g~vkL~DFG 220 (437)
T 4aw2_A 146 DNNLYLVMDYYVGGDLLTLLSKFE--DRLPEEMARFYLAEMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLADFG 220 (437)
T ss_dssp SSEEEEEECCCTTCBHHHHHHTTT--TCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCT
T ss_pred CCEEEEEEecCCCCcHHHHHHHcc--CCCCHHHHHHHHHHHHHHHHHHH---hCCeEecccCHHHeeEcCCCCEEEcchh
Confidence 999999999999999999997632 23899999999999999999999 7799999999999999999999999999
Q ss_pred ccccccCCCCC-ceecccccccccccccc-----CCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccc
Q 012219 321 VARLLNFDSSN-RTLLAGTYGYIAPELAY-----TMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDL 394 (468)
Q Consensus 321 ~~~~~~~~~~~-~~~~~g~~~y~aPE~~~-----~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 394 (468)
+++........ ....+||+.|+|||++. ...++.++|||||||++|||++|+.||...................
T Consensus 221 la~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~ 300 (437)
T 4aw2_A 221 SCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERF 300 (437)
T ss_dssp TCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHC
T ss_pred hhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhccccc
Confidence 99876533322 23357999999999987 5678999999999999999999999997543221110000000011
Q ss_pred cCCCCCCccchhHHHHHHHHHHHHHhcccCCCCC--CCCHHHHHHH
Q 012219 395 LDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKS--RPTMQLVSNE 438 (468)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--RPs~~~v~~~ 438 (468)
.-+......+. .+.+++.+|+..+|++ ||+++|++++
T Consensus 301 ~~p~~~~~~s~-------~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 301 QFPTQVTDVSE-------NAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp CCCSSCCCSCH-------HHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred cCCcccccCCH-------HHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 11111111221 1567889999888888 9999999854
No 65
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=3.9e-44 Score=337.87 Aligned_cols=253 Identities=25% Similarity=0.419 Sum_probs=185.4
Q ss_pred hhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLI 247 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 247 (468)
.++|.+.+.||+|+||.||+|.. .+++.||+|++...........+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 36799999999999999999975 57999999999765544434457889999999999999999999999999999999
Q ss_pred EEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccC
Q 012219 248 YEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNF 327 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~ 327 (468)
|||+++++|.+++.... ..+++..++.++.|++.||.||| +.+++||||||+||+++.++.+||+|||++.....
T Consensus 90 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~ 164 (278)
T 3cok_A 90 LEMCHNGEMNRYLKNRV--KPFSENEARHFMHQIITGMLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKM 164 (278)
T ss_dssp EECCTTEEHHHHHHTCS--SCCCHHHHHHHHHHHHHHHHHHH---HTTEECSSCCGGGEEECTTCCEEECCCTTCEECC-
T ss_pred EecCCCCcHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEEeecceeeccC
Confidence 99999999999997543 34899999999999999999999 77999999999999999999999999999987654
Q ss_pred CCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhH
Q 012219 328 DSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKI 407 (468)
Q Consensus 328 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (468)
.........|++.|+|||.+.+..++.++||||||+++|||++|+.||........... .. ..+........
T Consensus 165 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~--~~---~~~~~~~~~~~--- 236 (278)
T 3cok_A 165 PHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNK--VV---LADYEMPSFLS--- 236 (278)
T ss_dssp ---------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-------CC---SSCCCCCTTSC---
T ss_pred CCCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHH--Hh---hcccCCccccC---
Confidence 43334456789999999999988899999999999999999999999875432211100 00 00111111111
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 408 RQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 408 ~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
. .+.+++.+||+.||++|||+++++++
T Consensus 237 -~---~~~~li~~~l~~dp~~Rps~~~~l~h 263 (278)
T 3cok_A 237 -I---EAKDLIHQLLRRNPADRLSLSSVLDH 263 (278)
T ss_dssp -H---HHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred -H---HHHHHHHHHcccCHhhCCCHHHHhcC
Confidence 1 26679999999999999999999864
No 66
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=3.5e-44 Score=341.59 Aligned_cols=260 Identities=17% Similarity=0.183 Sum_probs=206.8
Q ss_pred hCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhc-cCCceeeEEEEEeeCCEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQI-RHRNIVKLYGFCLHRKCMFLI 247 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 247 (468)
++|.+.+.||+|+||.||+|.. .+++.||||++...... +.+.+|++++..+ +|+|++++++++......++|
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 84 (298)
T 1csn_A 10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDA-----PQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLV 84 (298)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTS-----CCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEE
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCcc-----HHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEE
Confidence 5799999999999999999974 67999999998754432 3577899999999 799999999999999999999
Q ss_pred EEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCC-----eEEeecccc
Q 012219 248 YEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELE-----AFVADFGVA 322 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~-----~kl~Dfg~~ 322 (468)
|||+ +++|.+++..... .+++..++.++.||+.||+||| +.+|+||||||+||+++.++. +||+|||++
T Consensus 85 ~e~~-~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~ 158 (298)
T 1csn_A 85 IDLL-GPSLEDLLDLCGR--KFSVKTVAMAAKQMLARVQSIH---EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMV 158 (298)
T ss_dssp EECC-CCBHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTC
T ss_pred EEec-CCCHHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEeccCCCCCCCeEEEEECccc
Confidence 9999 9999999986432 4899999999999999999999 889999999999999987776 999999999
Q ss_pred ccccCCCC-------CceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhh--hccccc-c
Q 012219 323 RLLNFDSS-------NRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSL--DKNIKL-I 392 (468)
Q Consensus 323 ~~~~~~~~-------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~--~~~~~~-~ 392 (468)
+....... ......||+.|+|||++.+..++.++||||||+++|||++|+.||.......... ...... .
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 238 (298)
T 1csn_A 159 KFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQ 238 (298)
T ss_dssp EESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHH
T ss_pred cccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhcc
Confidence 87654322 2234579999999999999999999999999999999999999997643221100 000000 0
Q ss_pred cccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCCCCC
Q 012219 393 DLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNKAPM 447 (468)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~~~~ 447 (468)
....+......+ ..+.+++.+||+.||++|||+++|++.|.+......
T Consensus 239 ~~~~~~~~~~~~-------~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~ 286 (298)
T 1csn_A 239 STPLRELCAGFP-------EEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLN 286 (298)
T ss_dssp HSCHHHHTTTSC-------HHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred CccHHHHHhhCc-------HHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcC
Confidence 000000001111 237789999999999999999999999988764433
No 67
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.5e-44 Score=352.98 Aligned_cols=259 Identities=24% Similarity=0.354 Sum_probs=209.1
Q ss_pred hhCccccceeeeeCCceEEEEEc--------CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhc-cCCceeeEEEEEe
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL--------PSGKVVALKKLHRSETEELASLESFGNEARLLSQI-RHRNIVKLYGFCL 239 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~--------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~ 239 (468)
.++|.+.+.||+|+||.||+|.. ..+..||||++...... ...+.+.+|+++++++ +||||+++++++.
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~ 145 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATE--KDLSDLISEMEMMKMIGKHKNIINLLGACT 145 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCH--HHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCH--HHHHHHHHHHHHHHHhcCCchhhhheeeec
Confidence 36799999999999999999974 23467999999865433 3457789999999999 9999999999999
Q ss_pred eCCEEEEEEEeccCCChhhhhhcCcc-------------cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCce
Q 012219 240 HRKCMFLIYEYMEMGSLFCVLRTDEE-------------AVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNV 306 (468)
Q Consensus 240 ~~~~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NI 306 (468)
..+..++||||+++|+|.+++..... ...+++.+++.++.||+.||.||| +.+|+||||||+||
T Consensus 146 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NI 222 (382)
T 3tt0_A 146 QDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNV 222 (382)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGE
T ss_pred cCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCcceE
Confidence 99999999999999999999976432 235899999999999999999999 77999999999999
Q ss_pred eeCCCCCeEEeeccccccccCCCC--CceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccch
Q 012219 307 LLNSELEAFVADFGVARLLNFDSS--NRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSW 383 (468)
Q Consensus 307 ll~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~ 383 (468)
+++.++.+||+|||+++....... ......+|+.|+|||++.+..++.++|||||||++|||+| |+.||........
T Consensus 223 ll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~ 302 (382)
T 3tt0_A 223 LVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 302 (382)
T ss_dssp EECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH
T ss_pred EEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence 999999999999999987643322 2223457889999999999999999999999999999999 9999875443211
Q ss_pred hhhcccccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcC
Q 012219 384 SLDKNIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARN 443 (468)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~ 443 (468)
... .............. . .+.+++.+||+.||++|||+.++++.|+++.
T Consensus 303 ~~~----~~~~~~~~~~~~~~----~---~l~~li~~~l~~dP~~Rps~~ell~~L~~~~ 351 (382)
T 3tt0_A 303 FKL----LKEGHRMDKPSNCT----N---ELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 351 (382)
T ss_dssp HHH----HHTTCCCCCCSSCC----H---HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHH----HHcCCCCCCCccCC----H---HHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 110 01111111111111 1 2677999999999999999999999998775
No 68
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=3.4e-44 Score=336.90 Aligned_cols=255 Identities=27% Similarity=0.487 Sum_probs=192.6
Q ss_pred hCccccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhh-hhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEE-LASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
++|.+.+.||+|+||.||+|... ++.||||++....... ....+.+.+|+++++.++||||+++++++...+..++||
T Consensus 7 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (271)
T 3dtc_A 7 AELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVM 85 (271)
T ss_dssp TSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEE
T ss_pred hheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEE
Confidence 57899999999999999999874 8899999997654332 234567889999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCC--------CCCeEEeecc
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNS--------ELEAFVADFG 320 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~--------~~~~kl~Dfg 320 (468)
||+++++|.+++... .+++..++.++.|++.||.|||+....+|+||||||+||+++. ++.+||+|||
T Consensus 86 e~~~~~~L~~~~~~~----~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg 161 (271)
T 3dtc_A 86 EFARGGPLNRVLSGK----RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFG 161 (271)
T ss_dssp ECCTTEEHHHHHTSS----CCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCC
T ss_pred EcCCCCCHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCC
Confidence 999999999998632 4899999999999999999999432123999999999999986 6789999999
Q ss_pred ccccccCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCC
Q 012219 321 VARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLS 400 (468)
Q Consensus 321 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (468)
+++..... ......|++.|+|||.+.+..++.++||||||+++|||++|+.||............. .........
T Consensus 162 ~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~---~~~~~~~~~ 236 (271)
T 3dtc_A 162 LAREWHRT--TKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVA---MNKLALPIP 236 (271)
T ss_dssp C---------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHH---TSCCCCCCC
T ss_pred cccccccc--cccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhh---cCCCCCCCC
Confidence 99865432 2234568999999999998899999999999999999999999997654322111110 011111111
Q ss_pred CccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHh
Q 012219 401 PPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIA 441 (468)
Q Consensus 401 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~ 441 (468)
...+ ..+.+++.+||+.||++|||+.++++.|++
T Consensus 237 ~~~~-------~~~~~li~~~l~~~p~~Rps~~e~l~~L~~ 270 (271)
T 3dtc_A 237 STCP-------EPFAKLMEDCWNPDPHSRPSFTNILDQLTT 270 (271)
T ss_dssp TTCC-------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHC
T ss_pred cccC-------HHHHHHHHHHhcCCcccCcCHHHHHHHHhc
Confidence 1111 126779999999999999999999999975
No 69
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.1e-43 Score=342.22 Aligned_cols=264 Identities=26% Similarity=0.388 Sum_probs=199.8
Q ss_pred HHHhhCccccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhc--cCCceeeEEEEEeeC--
Q 012219 166 IEATEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQI--RHRNIVKLYGFCLHR-- 241 (468)
Q Consensus 166 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l--~h~niv~l~~~~~~~-- 241 (468)
....++|.+.+.||+|+||.||+|+.. ++.||||++..... ..+..|.+++... +||||+++++++...
T Consensus 33 ~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~------~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~ 105 (337)
T 3mdy_A 33 RTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTEE------ASWFRETEIYQTVLMRHENILGFIAADIKGTG 105 (337)
T ss_dssp TTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGGH------HHHHHHHHHHTSTTCCCTTBCCEEEEEEESCG
T ss_pred cccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecccc------chhhhHHHHHHHHhhcCCCeeeEEEEEccCCC
Confidence 344578999999999999999999885 89999999965432 3344566665554 899999999999887
Q ss_pred --CEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCC--------CeEecCCCCCceeeCCC
Q 012219 242 --KCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTP--------PIVHRDISSNNVLLNSE 311 (468)
Q Consensus 242 --~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~--------~ivH~dlk~~NIll~~~ 311 (468)
...++||||+++|+|.+++... .+++..++.++.|++.||.||| +. +|+||||||+||+++.+
T Consensus 106 ~~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~~~~ivH~Dikp~Nill~~~ 178 (337)
T 3mdy_A 106 SWTQLYLITDYHENGSLYDYLKST----TLDAKSMLKLAYSSVSGLCHLH---TEIFSTQGKPAIAHRDLKSKNILVKKN 178 (337)
T ss_dssp GGCEEEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHH---SCBCSTTCBCCEECSCCCGGGEEECTT
T ss_pred CCCceEEEEeccCCCcHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHH---HhhhhhccCCCEEecccchHHEEECCC
Confidence 7899999999999999999653 3899999999999999999999 56 99999999999999999
Q ss_pred CCeEEeeccccccccCCCCC----ceeccccccccccccccCCCCCcc------chhhHHHHHHHHHHhC----------
Q 012219 312 LEAFVADFGVARLLNFDSSN----RTLLAGTYGYIAPELAYTMVVTEK------CDVYSFGVVALEVLMG---------- 371 (468)
Q Consensus 312 ~~~kl~Dfg~~~~~~~~~~~----~~~~~g~~~y~aPE~~~~~~~~~~------~Dv~s~Gvil~el~tg---------- 371 (468)
+.+||+|||+++........ .....||+.|+|||++.+...+.+ +|||||||++|||+||
T Consensus 179 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~ 258 (337)
T 3mdy_A 179 GTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEY 258 (337)
T ss_dssp SCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCC
T ss_pred CCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccc
Confidence 99999999999776433222 123479999999999987766655 9999999999999999
Q ss_pred CCCCCcccccchhhhcc--cccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCCC
Q 012219 372 KHPGELLSSSSWSLDKN--IKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNKA 445 (468)
Q Consensus 372 ~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~~ 445 (468)
+.||............. ........+....... .......+.+++.+||+.||++|||+.++++.|+.....
T Consensus 259 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~ 332 (337)
T 3mdy_A 259 QLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWS--SDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSES 332 (337)
T ss_dssp CCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGG--GSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred cccHhhhcCCCCchhhhHHHHhhhccCccccccch--hhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhh
Confidence 55554322211111100 0011111222221111 113344588899999999999999999999999887543
No 70
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=3.5e-44 Score=348.91 Aligned_cols=252 Identities=21% Similarity=0.315 Sum_probs=206.1
Q ss_pred hhCccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhc-cCCceeeEEEEEeeCCEEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQI-RHRNIVKLYGFCLHRKCMFL 246 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 246 (468)
.++|.+.+.||+|+||.||+|+.. +++.||+|+++..........+.+..|.+++..+ +||||+++++++.+.+..++
T Consensus 19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 98 (353)
T 2i0e_A 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 98 (353)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEE
Confidence 478999999999999999999765 5789999999876544444567788999999988 79999999999999999999
Q ss_pred EEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccccccc
Q 012219 247 IYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLN 326 (468)
Q Consensus 247 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~ 326 (468)
||||+++|+|.+++.... .+++..++.++.||+.||.||| +.+|+||||||+|||++.++.+||+|||+++...
T Consensus 99 v~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 172 (353)
T 2i0e_A 99 VMEYVNGGDLMYHIQQVG---RFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENI 172 (353)
T ss_dssp EEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred EEeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEEcCCCcEEEEeCCcccccc
Confidence 999999999999997543 3899999999999999999999 7799999999999999999999999999998654
Q ss_pred CCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchh
Q 012219 327 FDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQK 406 (468)
Q Consensus 327 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (468)
.........+||+.|+|||++.+..++.++|||||||++|||++|+.||......... .. +.. ....++...+
T Consensus 173 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~-~~---i~~-~~~~~p~~~s-- 245 (353)
T 2i0e_A 173 WDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELF-QS---IME-HNVAYPKSMS-- 245 (353)
T ss_dssp CTTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH-HH---HHH-CCCCCCTTSC--
T ss_pred cCCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHH-HH---HHh-CCCCCCCCCC--
Confidence 4444455678999999999999999999999999999999999999999754322111 00 000 0111222122
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCC-----HHHHHHH
Q 012219 407 IRQDIILVSTVAFSCLRSQPKSRPT-----MQLVSNE 438 (468)
Q Consensus 407 ~~~~~~~l~~l~~~cl~~dP~~RPs-----~~~v~~~ 438 (468)
. .+.+++.+||+.||++||+ +++++++
T Consensus 246 --~---~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h 277 (353)
T 2i0e_A 246 --K---EAVAICKGLMTKHPGKRLGCGPEGERDIKEH 277 (353)
T ss_dssp --H---HHHHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred --H---HHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 1 2667999999999999995 5777753
No 71
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=4.7e-44 Score=360.06 Aligned_cols=251 Identities=25% Similarity=0.381 Sum_probs=203.6
Q ss_pred hhCccccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCC-EEEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRK-CMFLI 247 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-~~~lv 247 (468)
.++|.+.+.||+|+||.||+|... ++.||||+++... ..+.|.+|++++++++||||+++++++.... ..++|
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv 265 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV 265 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT-----TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEE
T ss_pred hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch-----HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEE
Confidence 467899999999999999999885 7899999998654 2367899999999999999999999987765 78999
Q ss_pred EEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccC
Q 012219 248 YEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNF 327 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~ 327 (468)
|||+++|+|.+++..... ..+++..++.++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++....
T Consensus 266 ~e~~~~g~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 341 (450)
T 1k9a_A 266 TEYMAKGSLVDYLRSRGR-SVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 341 (450)
T ss_dssp EECCTTCBHHHHHHHHCT-TTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTSCEEECCCTTCEECC-
T ss_pred EEecCCCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEECCCCCEEEeeCCCcccccc
Confidence 999999999999986432 23789999999999999999999 77999999999999999999999999999986432
Q ss_pred CCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCCCCCCccchh
Q 012219 328 DSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQK 406 (468)
Q Consensus 328 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (468)
. .....++..|+|||++.+..++.++|||||||++|||+| |+.||........... .............+
T Consensus 342 ~---~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~----i~~~~~~~~p~~~~-- 412 (450)
T 1k9a_A 342 T---QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPR----VEKGYKMDAPDGCP-- 412 (450)
T ss_dssp --------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHH----HHTTCCCCCCTTCC--
T ss_pred c---ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH----HHcCCCCCCCCcCC--
Confidence 2 222357889999999999999999999999999999998 9999976543221111 00111111111111
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcC
Q 012219 407 IRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARN 443 (468)
Q Consensus 407 ~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~ 443 (468)
..+.+++.+||+.||++|||+.++++.|+.+.
T Consensus 413 -----~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~ 444 (450)
T 1k9a_A 413 -----PAVYDVMKNCWHLDAATRPTFLQLREQLEHIR 444 (450)
T ss_dssp -----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -----HHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 12677999999999999999999999998764
No 72
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=5.9e-44 Score=347.64 Aligned_cols=251 Identities=23% Similarity=0.319 Sum_probs=187.4
Q ss_pred hhCccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLI 247 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 247 (468)
.++|.+.+.||+|+||.||+|+.. +++.||||++..... .+.+.+|++++++++||||+++++++...+..++|
T Consensus 52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 126 (349)
T 2w4o_A 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVD-----KKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLV 126 (349)
T ss_dssp GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC---------------CHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccchh-----HHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEE
Confidence 467999999999999999999765 588999999986532 35678999999999999999999999999999999
Q ss_pred EEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCC---CCCeEEeecccccc
Q 012219 248 YEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNS---ELEAFVADFGVARL 324 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~---~~~~kl~Dfg~~~~ 324 (468)
|||+++|+|.+++.... .+++.+++.++.|++.||.||| +.+|+||||||+||+++. ++.+||+|||+++.
T Consensus 127 ~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~ 200 (349)
T 2w4o_A 127 LELVTGGELFDRIVEKG---YYSERDAADAVKQILEAVAYLH---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKI 200 (349)
T ss_dssp ECCCCSCBHHHHHTTCS---SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESSSSTTCCEEECCCC----
T ss_pred EEeCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCcccEEEecCCCCCCEEEccCccccc
Confidence 99999999999997543 3899999999999999999999 779999999999999975 88999999999987
Q ss_pred ccCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccc
Q 012219 325 LNFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVD 404 (468)
Q Consensus 325 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (468)
.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.............................
T Consensus 201 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 279 (349)
T 2w4o_A 201 VEHQ-VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVS 279 (349)
T ss_dssp -------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCCCCTTTTTTSC
T ss_pred cCcc-cccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCccCCchhhhCC
Confidence 6432 223345789999999999999999999999999999999999999975443221111110000000001111111
Q ss_pred hhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 405 QKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 405 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
..+.+++.+||+.||++|||+.+++++
T Consensus 280 -------~~~~~li~~~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 280 -------LNAKDLVRKLIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp -------HHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred -------HHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 126679999999999999999999865
No 73
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=1.7e-43 Score=334.47 Aligned_cols=261 Identities=23% Similarity=0.349 Sum_probs=206.3
Q ss_pred hhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLI 247 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 247 (468)
.++|.+.+.||+|+||.||+|.. .+++.||+|++....... ...+.+.+|++++++++||||+++++++...+..++|
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 83 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSA-RDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 83 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCH-HHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCH-HHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEE
Confidence 46899999999999999999975 468999999997654322 3456788999999999999999999999999999999
Q ss_pred EEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCC---eEEeecccccc
Q 012219 248 YEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELE---AFVADFGVARL 324 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~---~kl~Dfg~~~~ 324 (468)
|||+++++|.+.+.... .+++..+..++.|++.||.||| +.+|+||||||+||+++.++. +||+|||++..
T Consensus 84 ~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~ 157 (284)
T 3kk8_A 84 FDLVTGGELFEDIVARE---FYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIE 157 (284)
T ss_dssp ECCCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred EecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEE
Confidence 99999999998887543 3899999999999999999999 779999999999999987655 99999999977
Q ss_pred ccCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccc
Q 012219 325 LNFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVD 404 (468)
Q Consensus 325 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (468)
.... .......|++.|+|||++.+..++.++||||||+++|+|++|+.||.....................+.. ....
T Consensus 158 ~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 235 (284)
T 3kk8_A 158 VNDS-EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEW-DTVT 235 (284)
T ss_dssp CCSS-CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTT-TTSC
T ss_pred cccC-ccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhccccCCchhh-cccC
Confidence 6532 2333457899999999999999999999999999999999999999754332211111001111111110 1111
Q ss_pred hhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH-HHhcCCC
Q 012219 405 QKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE-FIARNKA 445 (468)
Q Consensus 405 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~-l~~~~~~ 445 (468)
. .+.+++.+||+.||++|||+.+++++ +......
T Consensus 236 ----~---~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~ 270 (284)
T 3kk8_A 236 ----P---EAKSLIDSMLTVNPKKRITADQALKVPWICNRER 270 (284)
T ss_dssp ----H---HHHHHHHHHSCSSTTTSCCHHHHTTSHHHHSCCC
T ss_pred ----H---HHHHHHHHHcccChhhCCCHHHHhcCccccCChh
Confidence 1 26679999999999999999999853 4444333
No 74
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=4.6e-44 Score=343.33 Aligned_cols=259 Identities=24% Similarity=0.385 Sum_probs=208.7
Q ss_pred hhCccccceeeeeCCceEEEEEc------CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCC
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL------PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRK 242 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 242 (468)
.++|.+.+.||+|+||.||+|.. .+++.||||++...... ...+.+.+|++++++++||||+++++++...+
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 99 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASP--SELRDLLSEFNVLKQVNHPHVIKLYGACSQDG 99 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCH--HHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCH--HHHHHHHHHHHHHhhCCCCceeeEEEEEecCC
Confidence 46799999999999999999974 34588999999765432 34577899999999999999999999999999
Q ss_pred EEEEEEEeccCCChhhhhhcCcc---------------------cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCC
Q 012219 243 CMFLIYEYMEMGSLFCVLRTDEE---------------------AVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDI 301 (468)
Q Consensus 243 ~~~lv~e~~~~gsL~~~l~~~~~---------------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dl 301 (468)
..++||||+++|+|.+++..... ...+++.+++.++.||+.||.||| +.+|+||||
T Consensus 100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~di 176 (314)
T 2ivs_A 100 PLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA---EMKLVHRDL 176 (314)
T ss_dssp SCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHH---HTTEECCCC
T ss_pred ceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHH---HCCCccccc
Confidence 99999999999999999976432 234889999999999999999999 779999999
Q ss_pred CCCceeeCCCCCeEEeeccccccccCCCCC--ceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcc
Q 012219 302 SSNNVLLNSELEAFVADFGVARLLNFDSSN--RTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELL 378 (468)
Q Consensus 302 k~~NIll~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~ 378 (468)
||+||+++.++.+||+|||+++........ .....+++.|+|||.+.+..++.++||||||+++|||+| |+.||...
T Consensus 177 kp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 256 (314)
T 2ivs_A 177 AARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI 256 (314)
T ss_dssp SGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred chheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 999999999999999999999876433221 223456788999999998889999999999999999999 99999765
Q ss_pred cccchhhhcccccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcC
Q 012219 379 SSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARN 443 (468)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~ 443 (468)
........ ......+......+ + .+.+++.+||+.||++|||+.++++.|+++.
T Consensus 257 ~~~~~~~~----~~~~~~~~~~~~~~----~---~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~ 310 (314)
T 2ivs_A 257 PPERLFNL----LKTGHRMERPDNCS----E---EMYRLMLQCWKQEPDKRPVFADISKDLEKMM 310 (314)
T ss_dssp CGGGHHHH----HHTTCCCCCCTTCC----H---HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CHHHHHHH----hhcCCcCCCCccCC----H---HHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 43221111 00001111111111 1 2677999999999999999999999998764
No 75
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=2.3e-44 Score=347.65 Aligned_cols=256 Identities=24% Similarity=0.396 Sum_probs=198.0
Q ss_pred hCccccceeeeeCCceEEEEEcC-CCCE----EEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLP-SGKV----VALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCM 244 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~----vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 244 (468)
++|.+.+.||+|+||.||+|.+. +++. ||+|.+...... ...+.|.+|+.++++++||||++++++|.... .
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~ 91 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSP--KANKEILDEAYVMASVDNPHVCRLLGICLTST-V 91 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC---------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-E
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCH--HHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-e
Confidence 57899999999999999999753 4443 588888644322 34578999999999999999999999998765 7
Q ss_pred EEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccccc
Q 012219 245 FLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARL 324 (468)
Q Consensus 245 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~ 324 (468)
++|+||+++|+|.+++..... .+++..++.++.||+.||.||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 92 ~~v~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~ 166 (327)
T 3poz_A 92 QLITQLMPFGCLLDYVREHKD--NIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 166 (327)
T ss_dssp EEEEECCTTCBHHHHHHHSTT--SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTHHHH
T ss_pred EEEEEecCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCChheEEECCCCCEEEccCcceeE
Confidence 789999999999999976543 4899999999999999999999 77999999999999999999999999999987
Q ss_pred ccCCCCC--ceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCCCCCC
Q 012219 325 LNFDSSN--RTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDPRLSP 401 (468)
Q Consensus 325 ~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (468)
....... .....+|+.|+|||++.+..++.++|||||||++|||+| |+.||............ ..........
T Consensus 167 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~----~~~~~~~~~~ 242 (327)
T 3poz_A 167 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL----EKGERLPQPP 242 (327)
T ss_dssp HTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHH----HTTCCCCCCT
T ss_pred ccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHH----HcCCCCCCCc
Confidence 7543322 223456789999999999999999999999999999999 99999765432211100 0000111111
Q ss_pred ccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCC
Q 012219 402 PVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNK 444 (468)
Q Consensus 402 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~ 444 (468)
... ..+.+++.+||+.||++|||+.++++.|.....
T Consensus 243 ~~~-------~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~ 278 (327)
T 3poz_A 243 ICT-------IDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp TBC-------HHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHT
T ss_pred cCC-------HHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 111 126779999999999999999999999987643
No 76
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=1.1e-44 Score=365.17 Aligned_cols=259 Identities=24% Similarity=0.396 Sum_probs=208.7
Q ss_pred HHhhCccccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEE
Q 012219 167 EATEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFL 246 (468)
Q Consensus 167 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 246 (468)
...++|.+.+.||+|+||.||+|.+.++..||||+++.... ..+.|.+|++++++++||||+++++++. .+..++
T Consensus 185 i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~l 259 (454)
T 1qcf_A 185 IPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSM----SVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYI 259 (454)
T ss_dssp CCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTSB----CHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEE
T ss_pred echHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCCc----cHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEE
Confidence 34578999999999999999999998889999999986542 3578999999999999999999999987 556899
Q ss_pred EEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccccccc
Q 012219 247 IYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLN 326 (468)
Q Consensus 247 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~ 326 (468)
||||+++|+|.++++... ...+++..++.++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++...
T Consensus 260 v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~ 335 (454)
T 1qcf_A 260 ITEFMAKGSLLDFLKSDE-GSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIE 335 (454)
T ss_dssp EECCCTTCBHHHHHHSHH-HHTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBC
T ss_pred EEeecCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHEEECCCCcEEEeeCCCceEcC
Confidence 999999999999997543 224788999999999999999999 7799999999999999999999999999998764
Q ss_pred CCCC-CceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCCCCCCccc
Q 012219 327 FDSS-NRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVD 404 (468)
Q Consensus 327 ~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (468)
.... ......++..|+|||++....++.++|||||||++|||+| |+.||........... +............+
T Consensus 336 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~----i~~~~~~~~~~~~~ 411 (454)
T 1qcf_A 336 DNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRA----LERGYRMPRPENCP 411 (454)
T ss_dssp CHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHH----HHHTCCCCCCTTSC
T ss_pred CCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHH----HHcCCCCCCCCCCC
Confidence 2111 1122346778999999998899999999999999999999 9999976543211110 00101111111111
Q ss_pred hhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCCC
Q 012219 405 QKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNKA 445 (468)
Q Consensus 405 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~~ 445 (468)
..+.+++.+||+.||++|||+++|++.|+.....
T Consensus 412 -------~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~ 445 (454)
T 1qcf_A 412 -------EELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTA 445 (454)
T ss_dssp -------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSS
T ss_pred -------HHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhc
Confidence 1267899999999999999999999999987554
No 77
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.4e-44 Score=348.17 Aligned_cols=266 Identities=23% Similarity=0.362 Sum_probs=207.3
Q ss_pred HhhCccccceeeeeCCceEEEEEc------CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhc-cCCceeeEEEEEee
Q 012219 168 ATEDFHIKYCIGTGGYGSVYRARL------PSGKVVALKKLHRSETEELASLESFGNEARLLSQI-RHRNIVKLYGFCLH 240 (468)
Q Consensus 168 ~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~ 240 (468)
..++|.+.+.||+|+||.||+|.. .++..||+|++...... ...+.+.+|++++.++ +||||+++++++..
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 120 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADS--SEREALMSELKMMTQLGSHENIVNLLGACTL 120 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC--------CHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCH--HHHHHHHHHHHHHHhhcCCCCeeeEEEEEee
Confidence 357899999999999999999975 24668999999754322 2346788999999999 89999999999999
Q ss_pred CCEEEEEEEeccCCChhhhhhcCccc--------------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecC
Q 012219 241 RKCMFLIYEYMEMGSLFCVLRTDEEA--------------------VGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRD 300 (468)
Q Consensus 241 ~~~~~lv~e~~~~gsL~~~l~~~~~~--------------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~d 300 (468)
.+..++||||+++|+|.+++...... ..+++..++.++.||+.||.||| +.+|+|||
T Consensus 121 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~D 197 (344)
T 1rjb_A 121 SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHRD 197 (344)
T ss_dssp SSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHH---HTTEEETT
T ss_pred CCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCcccCC
Confidence 99999999999999999999764321 23789999999999999999999 77999999
Q ss_pred CCCCceeeCCCCCeEEeeccccccccCCCCC--ceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCc
Q 012219 301 ISSNNVLLNSELEAFVADFGVARLLNFDSSN--RTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGEL 377 (468)
Q Consensus 301 lk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~ 377 (468)
|||+||+++.++.+||+|||+++........ .....+|+.|+|||++.+..++.++|||||||++|||+| |+.||..
T Consensus 198 ikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~ 277 (344)
T 1rjb_A 198 LAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPG 277 (344)
T ss_dssp CSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTT
T ss_pred CChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCccc
Confidence 9999999999999999999999876543322 123456789999999998899999999999999999998 9999976
Q ss_pred ccccchhhhcccccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCCCCCC
Q 012219 378 LSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNKAPMQ 448 (468)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~~~~~ 448 (468)
.......... ......+......+ + .+.+++.+||+.||.+|||+.++++.|.........
T Consensus 278 ~~~~~~~~~~---~~~~~~~~~~~~~~----~---~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~ 338 (344)
T 1rjb_A 278 IPVDANFYKL---IQNGFKMDQPFYAT----E---EIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAEE 338 (344)
T ss_dssp CCCSHHHHHH---HHTTCCCCCCTTCC----H---HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-----
T ss_pred CCcHHHHHHH---HhcCCCCCCCCCCC----H---HHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHHHH
Confidence 5432211110 00111111111111 1 267799999999999999999999999988665433
No 78
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=8.3e-44 Score=358.63 Aligned_cols=253 Identities=24% Similarity=0.383 Sum_probs=206.8
Q ss_pred hCccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
++|.+.+.||+|+||.||+|+.. +|+.||||++...........+.+.+|+++++.++||||+++++++...+..++||
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 95 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM 95 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 57999999999999999999764 79999999998655444345677899999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||+++|+|.+++.... .+++.++..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 96 E~~~gg~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH---~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~ 169 (476)
T 2y94_A 96 EYVSGGELFDYICKNG---RLDEKESRRLFQQILSGVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG 169 (476)
T ss_dssp ECCSSEEHHHHTTSSS---SCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTT
T ss_pred eCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCCCcccccHHHEEEecCCCeEEEeccchhhcccc
Confidence 9999999999997543 3899999999999999999999 789999999999999999999999999999876532
Q ss_pred CCCceeccccccccccccccCCCC-CccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhH
Q 012219 329 SSNRTLLAGTYGYIAPELAYTMVV-TEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKI 407 (468)
Q Consensus 329 ~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (468)
......+||+.|+|||++.+..+ +.++|||||||++|||++|+.||+.......... +.... ........
T Consensus 170 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~----i~~~~-~~~p~~~s--- 240 (476)
T 2y94_A 170 -EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKK----ICDGI-FYTPQYLN--- 240 (476)
T ss_dssp -CCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHH----HHTTC-CCCCTTCC---
T ss_pred -ccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHH----HhcCC-cCCCccCC---
Confidence 33445679999999999988765 6899999999999999999999975432211110 00000 01111111
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHH-HHHh
Q 012219 408 RQDIILVSTVAFSCLRSQPKSRPTMQLVSN-EFIA 441 (468)
Q Consensus 408 ~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~-~l~~ 441 (468)
. .+.+++.+||+.||++|||++++++ .+..
T Consensus 241 -~---~~~~Li~~~L~~dP~~Rpt~~eil~hp~~~ 271 (476)
T 2y94_A 241 -P---SVISLLKHMLQVDPMKRATIKDIREHEWFK 271 (476)
T ss_dssp -H---HHHHHHHHHTCSSTTTSCCHHHHHTCHHHH
T ss_pred -H---HHHHHHHHHcCCCchhCcCHHHHHhCHHhh
Confidence 1 2667999999999999999999995 3444
No 79
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=5.7e-44 Score=347.34 Aligned_cols=248 Identities=22% Similarity=0.303 Sum_probs=205.5
Q ss_pred hCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
++|.+.+.||+|+||.||+|+. .+|+.||+|++...........+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 120 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence 6799999999999999999975 478999999997665544455678889999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||+++|+|.+++.... .+++..+..++.||+.||.||| +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus 121 e~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~ 194 (350)
T 1rdq_E 121 EYVAGGEMFSHLRRIG---RFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 194 (350)
T ss_dssp ECCTTCBHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC
T ss_pred cCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCccceEEECCCCCEEEcccccceeccCC
Confidence 9999999999997643 3899999999999999999999 779999999999999999999999999999876432
Q ss_pred CCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHH
Q 012219 329 SSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIR 408 (468)
Q Consensus 329 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (468)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||......... .. +.. -...+....+.
T Consensus 195 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~-~~---i~~-~~~~~p~~~~~--- 263 (350)
T 1rdq_E 195 ---TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY-EK---IVS-GKVRFPSHFSS--- 263 (350)
T ss_dssp ---BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH-HH---HHH-CCCCCCTTCCH---
T ss_pred ---cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHH-HH---HHc-CCCCCCCCCCH---
Confidence 23457999999999999999999999999999999999999999754321111 00 000 01112222221
Q ss_pred HHHHHHHHHHHhcccCCCCCCCC-----HHHHHHH
Q 012219 409 QDIILVSTVAFSCLRSQPKSRPT-----MQLVSNE 438 (468)
Q Consensus 409 ~~~~~l~~l~~~cl~~dP~~RPs-----~~~v~~~ 438 (468)
.+.+++.+||+.||++||+ +++++++
T Consensus 264 ----~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h 294 (350)
T 1rdq_E 264 ----DLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294 (350)
T ss_dssp ----HHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred ----HHHHHHHHHhhcCHHhccCCccCCHHHHHhC
Confidence 2667999999999999998 8888753
No 80
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=8.1e-44 Score=340.67 Aligned_cols=255 Identities=27% Similarity=0.454 Sum_probs=198.7
Q ss_pred hCccccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYE 249 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 249 (468)
++|.+.+.||+|+||.||+|+.. ++.||+|++.... ..+.|.+|++++++++||||+++++++.+. .++|||
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~--~~lv~e 79 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESES-----ERKAFIVELRQLSRVNHPNIVKLYGACLNP--VCLVME 79 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSSTT-----HHHHHHHHHHHHHHCCCTTBCCEEEBCTTT--TEEEEE
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecChh-----HHHHHHHHHHHHhcCCCCCcCeEEEEEcCC--cEEEEE
Confidence 57889999999999999999874 7889999997543 246788999999999999999999998743 689999
Q ss_pred eccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCC-eEEeeccccccccCC
Q 012219 250 YMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELE-AFVADFGVARLLNFD 328 (468)
Q Consensus 250 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~-~kl~Dfg~~~~~~~~ 328 (468)
|+++|+|.+++........+++..++.++.|+++||+|||+.+..+|+||||||+||+++.++. +||+|||+++.....
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~ 159 (307)
T 2eva_A 80 YAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH 159 (307)
T ss_dssp CCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC-------
T ss_pred cCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc
Confidence 9999999999987655445789999999999999999999543379999999999999998887 799999999765422
Q ss_pred CCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHH
Q 012219 329 SSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIR 408 (468)
Q Consensus 329 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (468)
.....||+.|+|||++.+..++.++||||||+++|||+||+.||............ .......+......+
T Consensus 160 ---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~--~~~~~~~~~~~~~~~---- 230 (307)
T 2eva_A 160 ---MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMW--AVHNGTRPPLIKNLP---- 230 (307)
T ss_dssp --------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHH--HHHTTCCCCCBTTCC----
T ss_pred ---cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHH--HHhcCCCCCcccccC----
Confidence 23346899999999999999999999999999999999999999754332211110 000011111111111
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCC
Q 012219 409 QDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNK 444 (468)
Q Consensus 409 ~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~ 444 (468)
. .+.+++.+||+.||++|||++++++.|.....
T Consensus 231 ~---~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 263 (307)
T 2eva_A 231 K---PIESLMTRCWSKDPSQRPSMEEIVKIMTHLMR 263 (307)
T ss_dssp H---HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGG
T ss_pred H---HHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence 1 26679999999999999999999999987653
No 81
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=3.3e-44 Score=345.90 Aligned_cols=265 Identities=23% Similarity=0.359 Sum_probs=193.7
Q ss_pred hhCccccceeeeeCCceEEEEEcCCC----CEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARLPSG----KVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCM 244 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~~~~----~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 244 (468)
.++|.+.+.||+|+||.||+|..... ..||||++....... ...+.+.+|++++++++||||+++++++......
T Consensus 22 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 100 (323)
T 3qup_A 22 EQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIAS-SDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAK 100 (323)
T ss_dssp ---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------C-HHHHHHHHHHHHHTTCCCTTBCCCCEEEECC---
T ss_pred hhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCH-HHHHHHHHHHHHHHHCCCCceehhhceeeccccc
Confidence 46799999999999999999986543 279999997654322 3457899999999999999999999999877655
Q ss_pred ------EEEEEeccCCChhhhhhcCc---ccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeE
Q 012219 245 ------FLIYEYMEMGSLFCVLRTDE---EAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAF 315 (468)
Q Consensus 245 ------~lv~e~~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~k 315 (468)
++||||+++|+|.+++.... ....+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+|
T Consensus 101 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~ivH~Dikp~NIli~~~~~~k 177 (323)
T 3qup_A 101 GRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLS---SRNFIHRDLAARNCMLAEDMTVC 177 (323)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEE
T ss_pred cCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHH---cCCcccCCCCcceEEEcCCCCEE
Confidence 99999999999999986532 2225899999999999999999999 77999999999999999999999
Q ss_pred EeeccccccccCCCC--CceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccc
Q 012219 316 VADFGVARLLNFDSS--NRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLI 392 (468)
Q Consensus 316 l~Dfg~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~ 392 (468)
|+|||+++....... ......+++.|+|||.+.+..++.++|||||||++|||++ |+.||............ .
T Consensus 178 l~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~----~ 253 (323)
T 3qup_A 178 VADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYL----I 253 (323)
T ss_dssp ECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHH----H
T ss_pred EeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHH----h
Confidence 999999987643222 1223456788999999999999999999999999999999 99999765432221110 0
Q ss_pred cccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCCCCCC
Q 012219 393 DLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNKAPMQ 448 (468)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~~~~~ 448 (468)
............ ..+.+++.+||+.||++|||+.++++.|++....++.
T Consensus 254 ~~~~~~~~~~~~-------~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~ 302 (323)
T 3qup_A 254 GGNRLKQPPECM-------EEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSV 302 (323)
T ss_dssp TTCCCCCCTTCC-------HHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC---
T ss_pred cCCCCCCCCccC-------HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhh
Confidence 000111111111 1267899999999999999999999999887755543
No 82
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.7e-44 Score=352.46 Aligned_cols=259 Identities=25% Similarity=0.336 Sum_probs=206.1
Q ss_pred hCccccceeeeeCCceEEEEEcC------CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLP------SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKC 243 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 243 (468)
++|.+.+.||+|+||.||+|.+. +++.||||++...... .....+.+|+.++++++||||+++++++.....
T Consensus 71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~ 148 (367)
T 3l9p_A 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE--QDELDFLMEALIISKFNHQNIVRCIGVSLQSLP 148 (367)
T ss_dssp GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCH--HHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccCh--hhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCC
Confidence 57899999999999999999843 4678999999754433 234578899999999999999999999999989
Q ss_pred EEEEEEeccCCChhhhhhcCc----ccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCC---CeEE
Q 012219 244 MFLIYEYMEMGSLFCVLRTDE----EAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSEL---EAFV 316 (468)
Q Consensus 244 ~~lv~e~~~~gsL~~~l~~~~----~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~---~~kl 316 (468)
.++||||+++|+|.+++.... ....+++.+++.++.||+.||+||| +.+|+||||||+|||++.++ .+||
T Consensus 149 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kL 225 (367)
T 3l9p_A 149 RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKI 225 (367)
T ss_dssp CEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred CEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEEecCCCCceEEE
Confidence 999999999999999997643 2235899999999999999999999 77999999999999999554 5999
Q ss_pred eeccccccccCC--CCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhccccccc
Q 012219 317 ADFGVARLLNFD--SSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLID 393 (468)
Q Consensus 317 ~Dfg~~~~~~~~--~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~ 393 (468)
+|||+++..... ........+|+.|+|||++.+..++.++|||||||++|||+| |+.||........... ...
T Consensus 226 ~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~----i~~ 301 (367)
T 3l9p_A 226 GDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEF----VTS 301 (367)
T ss_dssp CCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHH----HHT
T ss_pred CCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH----HHc
Confidence 999999865322 122334567899999999999999999999999999999998 9999975443211110 000
Q ss_pred ccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCC
Q 012219 394 LLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNK 444 (468)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~ 444 (468)
........... . .+.+++.+||+.||++|||+.++++.|.....
T Consensus 302 ~~~~~~~~~~~----~---~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~ 345 (367)
T 3l9p_A 302 GGRMDPPKNCP----G---PVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 345 (367)
T ss_dssp TCCCCCCTTCC----H---HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCCCccCC----H---HHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhh
Confidence 00111111111 1 26679999999999999999999999977653
No 83
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=2.1e-43 Score=347.48 Aligned_cols=253 Identities=22% Similarity=0.302 Sum_probs=204.0
Q ss_pred hhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLI 247 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 247 (468)
.++|.+.+.||+|+||.||+|.. .+++.||+|++....... ...+.+|+++++.++||||+++++++.+....++|
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~---~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv 126 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLD---KYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLI 126 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHH---HHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhh---HHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEE
Confidence 46799999999999999999975 478999999997654332 35688999999999999999999999999999999
Q ss_pred EEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCC--CCCeEEeeccccccc
Q 012219 248 YEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNS--ELEAFVADFGVARLL 325 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~--~~~~kl~Dfg~~~~~ 325 (468)
|||+++|+|.+++.... ..+++.+++.++.||+.||+||| +.+|+||||||+|||++. ++.+||+|||+++..
T Consensus 127 ~E~~~gg~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~ 201 (387)
T 1kob_A 127 LEFLSGGELFDRIAAED--YKMSEAEVINYMRQACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKL 201 (387)
T ss_dssp EECCCCCBHHHHTTCTT--CCBCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSTTCCCEEECCCTTCEEC
T ss_pred EEcCCCCcHHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccchHHeEEecCCCCceEEEecccceec
Confidence 99999999999987543 24899999999999999999999 779999999999999974 478999999999876
Q ss_pred cCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccch
Q 012219 326 NFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQ 405 (468)
Q Consensus 326 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (468)
... .......||+.|+|||++.+..++.++|||||||++|||+||+.||......... ..........++......+
T Consensus 202 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~-~~i~~~~~~~~~~~~~~~s- 278 (387)
T 1kob_A 202 NPD-EIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETL-QNVKRCDWEFDEDAFSSVS- 278 (387)
T ss_dssp CTT-SCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHH-HHHHHCCCCCCSSTTTTSC-
T ss_pred CCC-cceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHH-HHHHhCCCCCCccccccCC-
Confidence 533 3334557999999999999999999999999999999999999999754322111 1000000001111111111
Q ss_pred hHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 406 KIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 406 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
. .+.+++.+||+.||++|||+.+++++
T Consensus 279 ---~---~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 279 ---P---EAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp ---H---HHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred ---H---HHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 1 26679999999999999999999965
No 84
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=1.7e-44 Score=357.26 Aligned_cols=259 Identities=22% Similarity=0.288 Sum_probs=204.6
Q ss_pred HHHHhhCccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCE
Q 012219 165 MIEATEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKC 243 (468)
Q Consensus 165 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 243 (468)
+....++|.+.+.||+|+||.||+|+.. +++.||+|++...........+.+.+|+.+++.++||||+++++++.+.+.
T Consensus 64 ~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~ 143 (410)
T 3v8s_A 64 LRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRY 143 (410)
T ss_dssp HSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred cccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCE
Confidence 3345678999999999999999999764 689999999976443333334568899999999999999999999999999
Q ss_pred EEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccc
Q 012219 244 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVAR 323 (468)
Q Consensus 244 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~ 323 (468)
.++||||+++|+|.+++... .+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++
T Consensus 144 ~~lV~E~~~gg~L~~~l~~~----~~~e~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFG~a~ 216 (410)
T 3v8s_A 144 LYMVMEYMPGGDLVNLMSNY----DVPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCM 216 (410)
T ss_dssp EEEEECCCTTEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred EEEEEeCCCCCcHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeeECCCCCEEEeccceeE
Confidence 99999999999999998753 3889999999999999999999 7799999999999999999999999999998
Q ss_pred cccCCCC-CceeccccccccccccccCCC----CCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCC
Q 012219 324 LLNFDSS-NRTLLAGTYGYIAPELAYTMV----VTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPR 398 (468)
Q Consensus 324 ~~~~~~~-~~~~~~g~~~y~aPE~~~~~~----~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 398 (468)
....... .....+||+.|+|||++.+.. ++.++|||||||++|||+||+.||.......... ........+...
T Consensus 217 ~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~-~i~~~~~~~~~p 295 (410)
T 3v8s_A 217 KMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYS-KIMNHKNSLTFP 295 (410)
T ss_dssp ECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH-HHHTHHHHCCCC
T ss_pred eeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHH-HHHhccccccCC
Confidence 7653322 223467999999999987655 8899999999999999999999997543221111 000000000000
Q ss_pred CCCccchhHHHHHHHHHHHHHhcccCCCCC--CCCHHHHHHH
Q 012219 399 LSPPVDQKIRQDIILVSTVAFSCLRSQPKS--RPTMQLVSNE 438 (468)
Q Consensus 399 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--RPs~~~v~~~ 438 (468)
.....+ . .+.+++.+||..+|.+ ||+++|++++
T Consensus 296 ~~~~~s----~---~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 296 DDNDIS----K---EAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp TTCCCC----H---HHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred Cccccc----H---HHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 011111 1 2567899999999988 9999999965
No 85
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=8.2e-44 Score=341.27 Aligned_cols=262 Identities=25% Similarity=0.326 Sum_probs=197.8
Q ss_pred hCccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
++|.+.+.||+|+||.||+|... +|+.||+|++....... ...+.+.+|++++++++||||+++++++...+..++||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDP-VIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVF 81 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-H-HHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccch-HHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEE
Confidence 57899999999999999999764 58999999987654332 33567889999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||+++++|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 82 e~~~~~~l~~~~~~~~---~~~~~~~~~i~~~l~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 155 (311)
T 4agu_A 82 EYCDHTVLHELDRYQR---GVPEHLVKSITWQTLQAVNFCH---KHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGP 155 (311)
T ss_dssp ECCSEEHHHHHHHTSS---CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECC--
T ss_pred EeCCCchHHHHHhhhc---CCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCc
Confidence 9999999998887543 3899999999999999999999 779999999999999999999999999999877644
Q ss_pred CCCceeccccccccccccccC-CCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcc-------------------
Q 012219 329 SSNRTLLAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKN------------------- 388 (468)
Q Consensus 329 ~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~------------------- 388 (468)
........||+.|+|||++.+ ..++.++||||||+++|||+||+.||.............
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (311)
T 4agu_A 156 SDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQY 235 (311)
T ss_dssp ----------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGG
T ss_pred ccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccc
Confidence 444455678999999999876 678999999999999999999999997543321110000
Q ss_pred cccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 389 IKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
.......++................+.+++.+||+.||++|||+++++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 236 FSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp GTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred cccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 00000111111000000000111236789999999999999999999854
No 86
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.2e-44 Score=355.60 Aligned_cols=263 Identities=23% Similarity=0.307 Sum_probs=206.3
Q ss_pred HHHHHHHhhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEee
Q 012219 162 FQDMIEATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLH 240 (468)
Q Consensus 162 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 240 (468)
+.+.....++|.+.+.||+|+||.||+++. .+|+.||+|++...........+.+.+|.+++..++||||+++++++.+
T Consensus 53 ~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 132 (412)
T 2vd5_A 53 LKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQD 132 (412)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEee
Confidence 344444568899999999999999999976 4799999999976544333344568899999999999999999999999
Q ss_pred CCEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecc
Q 012219 241 RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFG 320 (468)
Q Consensus 241 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 320 (468)
.+..++||||+++|+|.+++.... ..+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||
T Consensus 133 ~~~~~lVmE~~~gg~L~~~l~~~~--~~l~~~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILld~~g~vkL~DFG 207 (412)
T 2vd5_A 133 ENYLYLVMEYYVGGDLLTLLSKFG--ERIPAEMARFYLAEIVMAIDSVH---RLGYVHRDIKPDNILLDRCGHIRLADFG 207 (412)
T ss_dssp SSEEEEEECCCCSCBHHHHHHHHS--SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCT
T ss_pred CCEEEEEEcCCCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccCHHHeeecCCCCEEEeech
Confidence 999999999999999999997543 24899999999999999999999 7799999999999999999999999999
Q ss_pred ccccccCCCCC-ceecccccccccccccc-------CCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccc
Q 012219 321 VARLLNFDSSN-RTLLAGTYGYIAPELAY-------TMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLI 392 (468)
Q Consensus 321 ~~~~~~~~~~~-~~~~~g~~~y~aPE~~~-------~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~ 392 (468)
+++........ ....+||+.|+|||++. ...++.++|||||||++|||++|+.||......... .......
T Consensus 208 la~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~-~~i~~~~ 286 (412)
T 2vd5_A 208 SCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETY-GKIVHYK 286 (412)
T ss_dssp TCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHH-HHHHTHH
T ss_pred hheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHH-HHHHhcc
Confidence 99876543322 22357999999999987 457899999999999999999999999754322111 0000000
Q ss_pred -cccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCC---CCHHHHHHH
Q 012219 393 -DLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSR---PTMQLVSNE 438 (468)
Q Consensus 393 -~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~R---Ps~~~v~~~ 438 (468)
....+......+. .+.+++.+||. +|++| |++++++++
T Consensus 287 ~~~~~p~~~~~~s~-------~~~dli~~lL~-~p~~Rlgr~~~~ei~~H 328 (412)
T 2vd5_A 287 EHLSLPLVDEGVPE-------EARDFIQRLLC-PPETRLGRGGAGDFRTH 328 (412)
T ss_dssp HHCCCC----CCCH-------HHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred cCcCCCccccCCCH-------HHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence 0101111111111 26678999999 99998 689999854
No 87
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=2e-44 Score=362.72 Aligned_cols=251 Identities=21% Similarity=0.284 Sum_probs=195.4
Q ss_pred hhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLI 247 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 247 (468)
.++|.+.+.||+|+||.||+|.. .+|+.||||++.............+.+|+++++.++||||+++++++...+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 36799999999999999999974 57899999999765433333456788999999999999999999999999999999
Q ss_pred EEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCC-CCeEecCCCCCceeeCCCCCeEEeecccccccc
Q 012219 248 YEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCT-PPIVHRDISSNNVLLNSELEAFVADFGVARLLN 326 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~-~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~ 326 (468)
|||+++|+|.+++.... .+++..+..++.||+.||+||| + .+|+||||||+|||++.++.+||+|||+++...
T Consensus 227 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH---~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 300 (446)
T 4ejn_A 227 MEYANGGELFFHLSRER---VFSEDRARFYGAEIVSALDYLH---SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGI 300 (446)
T ss_dssp ECCCSSCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTC
T ss_pred EeeCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHh---hcCCEEECCCCHHHEEECCCCCEEEccCCCceecc
Confidence 99999999999997543 4899999999999999999999 5 799999999999999999999999999998654
Q ss_pred CCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchh
Q 012219 327 FDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQK 406 (468)
Q Consensus 327 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (468)
..........||+.|+|||++.+..++.++|||||||++|||++|+.||............ . .-...+......
T Consensus 301 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i--~---~~~~~~p~~~~~- 374 (446)
T 4ejn_A 301 KDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI--L---MEEIRFPRTLGP- 374 (446)
T ss_dssp C-----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH--H---HCCCCCCTTSCH-
T ss_pred CCCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHH--H---hCCCCCCccCCH-
Confidence 4444455678999999999999999999999999999999999999999754332111100 0 001112222221
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCC-----CHHHHHH
Q 012219 407 IRQDIILVSTVAFSCLRSQPKSRP-----TMQLVSN 437 (468)
Q Consensus 407 ~~~~~~~l~~l~~~cl~~dP~~RP-----s~~~v~~ 437 (468)
.+.+++.+||+.||++|| +++++++
T Consensus 375 ------~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 375 ------EAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp ------HHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred ------HHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 266799999999999999 9999985
No 88
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=5.7e-44 Score=344.74 Aligned_cols=252 Identities=25% Similarity=0.359 Sum_probs=193.3
Q ss_pred hhCccccceeeeeCCceEEEEEc----CCCCEEEEEEecCcchh-hhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL----PSGKVVALKKLHRSETE-ELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKC 243 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 243 (468)
.++|.+.+.||+|+||.||+++. .+++.||+|+++..... .......+.+|+++++.++||||+++++++...+.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 36799999999999999999976 57899999999865422 12234567899999999999999999999999999
Q ss_pred EEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccc
Q 012219 244 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVAR 323 (468)
Q Consensus 244 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~ 323 (468)
.++||||+++|+|.+++.... .+++..+..++.||+.||.||| +.+|+||||||+||+++.++.+||+|||+++
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~ 169 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLEREG---IFMEDTACFYLAEISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCK 169 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTSCEEECCCSCC-
T ss_pred EEEEEeCCCCCcHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHH---hCCEEcccCCHHHeEECCCCcEEEEeCCccc
Confidence 999999999999999997543 3889999999999999999999 7799999999999999999999999999997
Q ss_pred cccCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCcc
Q 012219 324 LLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPV 403 (468)
Q Consensus 324 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (468)
.............||+.|+|||++.+..++.++|||||||++|||++|+.||......... .. +.. ....+....
T Consensus 170 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~-~~---i~~-~~~~~p~~~ 244 (327)
T 3a62_A 170 ESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTI-DK---ILK-CKLNLPPYL 244 (327)
T ss_dssp ---------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH-HH---HHH-TCCCCCTTS
T ss_pred ccccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHH-HH---HHh-CCCCCCCCC
Confidence 6544434444567999999999999999999999999999999999999999754322111 00 000 011122212
Q ss_pred chhHHHHHHHHHHHHHhcccCCCCCCC-----CHHHHHHH
Q 012219 404 DQKIRQDIILVSTVAFSCLRSQPKSRP-----TMQLVSNE 438 (468)
Q Consensus 404 ~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~~v~~~ 438 (468)
.. .+.+++.+||+.||++|| ++.+++++
T Consensus 245 ~~-------~~~~li~~~L~~dp~~R~~~~~~~~~e~l~h 277 (327)
T 3a62_A 245 TQ-------EARDLLKKLLKRNAASRLGAGPGDAGEVQAH 277 (327)
T ss_dssp CH-------HHHHHHHHHSCSCGGGSTTSSTTTHHHHHHS
T ss_pred CH-------HHHHHHHHHHhcCHhhccCCCCCCHHHHHcC
Confidence 21 266789999999999999 77888753
No 89
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=9.4e-44 Score=345.83 Aligned_cols=254 Identities=27% Similarity=0.397 Sum_probs=203.5
Q ss_pred hCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
+.|...+.||+|+||.||+|+. .+++.||||++...........+.+.+|++++++++||||+++++++...+..++||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 5588899999999999999974 678999999997654444445678999999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||+. |+|.+++.... ..+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 134 e~~~-g~l~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~- 206 (348)
T 1u5q_A 134 EYCL-GSASDLLEVHK--KPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP- 206 (348)
T ss_dssp ECCS-EEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS-
T ss_pred ecCC-CCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEeeccCceecCC-
Confidence 9997 68888875432 34899999999999999999999 67999999999999999999999999999976542
Q ss_pred CCCceecccccccccccccc---CCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCC-Cccc
Q 012219 329 SSNRTLLAGTYGYIAPELAY---TMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLS-PPVD 404 (468)
Q Consensus 329 ~~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 404 (468)
.....||+.|+|||++. ...++.++|||||||++|||++|+.||........... ......+... ...+
T Consensus 207 ---~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 279 (348)
T 1u5q_A 207 ---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYH----IAQNESPALQSGHWS 279 (348)
T ss_dssp ---BCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH----HHHSCCCCCCCTTSC
T ss_pred ---CCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHH----HHhcCCCCCCCCCCC
Confidence 23357899999999884 56789999999999999999999999875432211111 0111111111 1111
Q ss_pred hhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCC
Q 012219 405 QKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNK 444 (468)
Q Consensus 405 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~ 444 (468)
+ .+.+++.+||+.||++|||+++++++..-...
T Consensus 280 ----~---~l~~li~~~l~~dP~~Rps~~~ll~h~~~~~~ 312 (348)
T 1u5q_A 280 ----E---YFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRE 312 (348)
T ss_dssp ----H---HHHHHHHHHTCSSGGGSCCHHHHTTCHHHHSC
T ss_pred ----H---HHHHHHHHHcccChhhCcCHHHHhhChhhhcc
Confidence 1 26678999999999999999999966544433
No 90
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=7.1e-44 Score=341.88 Aligned_cols=260 Identities=24% Similarity=0.355 Sum_probs=209.5
Q ss_pred hhCccccceeeeeCCceEEEEEc------CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhc-cCCceeeEEEEEeeC
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL------PSGKVVALKKLHRSETEELASLESFGNEARLLSQI-RHRNIVKLYGFCLHR 241 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 241 (468)
.++|.+.+.||+|+||.||+|+. .+++.||+|++...... ...+.+.+|+++++++ +||||+++++++...
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 99 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHL--TEREALMSELKVLSYLGNHMNIVNLLGACTIG 99 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCH--HHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhH--HHHHHHHHHHHHHhhcccCCCeeeEEEEEecC
Confidence 46799999999999999999974 35788999999865433 2346789999999999 999999999999999
Q ss_pred CEEEEEEEeccCCChhhhhhcCcc---------------cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCce
Q 012219 242 KCMFLIYEYMEMGSLFCVLRTDEE---------------AVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNV 306 (468)
Q Consensus 242 ~~~~lv~e~~~~gsL~~~l~~~~~---------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NI 306 (468)
+..++||||+++|+|.+++..... ...+++.+++.++.|++.||.||| +.+|+||||||+||
T Consensus 100 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Ni 176 (313)
T 1t46_A 100 GPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNI 176 (313)
T ss_dssp SSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGE
T ss_pred CCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCccceE
Confidence 999999999999999999976532 224899999999999999999999 77999999999999
Q ss_pred eeCCCCCeEEeeccccccccCCCCC--ceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccch
Q 012219 307 LLNSELEAFVADFGVARLLNFDSSN--RTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSW 383 (468)
Q Consensus 307 ll~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~ 383 (468)
+++.++.+||+|||+++........ .....+++.|+|||++.+..++.++||||||+++|||+| |+.||........
T Consensus 177 l~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~ 256 (313)
T 1t46_A 177 LLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK 256 (313)
T ss_dssp EEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHH
T ss_pred EEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhH
Confidence 9999999999999999876543322 123456788999999998899999999999999999999 9999976543221
Q ss_pred hhhcccccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcC
Q 012219 384 SLDKNIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARN 443 (468)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~ 443 (468)
..... .....+......+ ..+.+++.+||+.||++|||+.++++.|++..
T Consensus 257 ~~~~~---~~~~~~~~~~~~~-------~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 306 (313)
T 1t46_A 257 FYKMI---KEGFRMLSPEHAP-------AEMYDIMKTCWDADPLKRPTFKQIVQLIEKQI 306 (313)
T ss_dssp HHHHH---HHTCCCCCCTTSC-------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHh---ccCCCCCCcccCC-------HHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence 11110 0111111111111 12677999999999999999999999998764
No 91
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.1e-43 Score=340.35 Aligned_cols=247 Identities=23% Similarity=0.248 Sum_probs=191.1
Q ss_pred hCccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhc-cCCceeeEEEEEeeCCEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQI-RHRNIVKLYGFCLHRKCMFLI 247 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 247 (468)
++|.+.+.||+|+||+||+|... +++.||||++......... ...+..|+..+.++ +||||++++++|.+.+..++|
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~-~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv 135 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKD-RARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQ 135 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHH-HHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHH-HHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEE
Confidence 57999999999999999999765 7999999998765433322 33445566555555 899999999999999999999
Q ss_pred EEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccC
Q 012219 248 YEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNF 327 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~ 327 (468)
|||+ +++|.+++.... ..+++..++.++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++....
T Consensus 136 ~e~~-~~~L~~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~ 209 (311)
T 3p1a_A 136 TELC-GPSLQQHCEAWG--ASLPEAQVWGYLRDTLLALAHLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGT 209 (311)
T ss_dssp EECC-CCBHHHHHHHHC--SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECGGGCEEECCCTTCEECC-
T ss_pred Eecc-CCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEECCCCCEEEccceeeeeccc
Confidence 9999 679988887543 34899999999999999999999 67999999999999999999999999999987643
Q ss_pred CCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhH
Q 012219 328 DSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKI 407 (468)
Q Consensus 328 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (468)
. .......||+.|+|||++.+ .++.++|||||||++|||++|..|+..... +.. +............
T Consensus 210 ~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~--~~~--------~~~~~~~~~~~~~- 276 (311)
T 3p1a_A 210 A-GAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEG--WQQ--------LRQGYLPPEFTAG- 276 (311)
T ss_dssp ------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHH--HHH--------HTTTCCCHHHHTT-
T ss_pred C-CCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccH--HHH--------HhccCCCcccccC-
Confidence 2 23334569999999998876 789999999999999999999766543211 100 0001111101111
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 408 RQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 408 ~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
....+.+++.+||+.||++|||+++++++
T Consensus 277 --~~~~l~~li~~~L~~dP~~Rpt~~ell~h 305 (311)
T 3p1a_A 277 --LSSELRSVLVMMLEPDPKLRATAEALLAL 305 (311)
T ss_dssp --SCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred --CCHHHHHHHHHHcCCChhhCcCHHHHHhC
Confidence 11237789999999999999999999853
No 92
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=1.6e-43 Score=339.05 Aligned_cols=264 Identities=23% Similarity=0.325 Sum_probs=198.5
Q ss_pred hhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLI 247 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 247 (468)
.++|.+.+.||+|+||.||+|.. .+|+.||+|++...........+.+.+|++++++++||||+++++++...+..++|
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 110 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV 110 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence 35799999999999999999975 57999999999864433334567889999999999999999999999999999999
Q ss_pred EEeccCCChhhhhhcCc-ccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccccccc
Q 012219 248 YEYMEMGSLFCVLRTDE-EAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLN 326 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~ 326 (468)
|||+++|+|.+++.... ....+++..++.++.|++.||.||| +.+++||||||+||+++.++.+||+|||+++...
T Consensus 111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~ 187 (310)
T 2wqm_A 111 LELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFS 187 (310)
T ss_dssp EECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred EecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence 99999999999986522 2344889999999999999999999 7799999999999999999999999999998765
Q ss_pred CCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCC-Cccch
Q 012219 327 FDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLS-PPVDQ 405 (468)
Q Consensus 327 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 405 (468)
..........|++.|+|||++.+..++.++||||||+++|||++|+.||............. ......+... ....
T Consensus 188 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~- 264 (310)
T 2wqm_A 188 SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKK--IEQCDYPPLPSDHYS- 264 (310)
T ss_dssp -----------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHH--HHTTCSCCCCTTTSC-
T ss_pred CCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHH--hhcccCCCCcccccC-
Confidence 44433445578999999999999999999999999999999999999986543221111110 0000001111 1111
Q ss_pred hHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCC
Q 012219 406 KIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNK 444 (468)
Q Consensus 406 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~ 444 (468)
. .+.+++.+||+.||++|||+.++++.|.++..
T Consensus 265 ---~---~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~ 297 (310)
T 2wqm_A 265 ---E---ELRQLVNMCINPDPEKRPDVTYVYDVAKRMHA 297 (310)
T ss_dssp ---H---HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---H---HHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence 1 26679999999999999999999999987753
No 93
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=1.1e-43 Score=334.89 Aligned_cols=251 Identities=31% Similarity=0.475 Sum_probs=202.9
Q ss_pred hhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLI 247 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 247 (468)
.++|.+.+.||+|+||.||+|.. .+++.||+|++...........+.+.+|++++++++||||+++++++.+....++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 46799999999999999999965 46789999999765554444567789999999999999999999999999999999
Q ss_pred EEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccC
Q 012219 248 YEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNF 327 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~ 327 (468)
|||+++|+|.+++.... .+++..++.++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++.....
T Consensus 88 ~e~~~~~~l~~~l~~~~---~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~ 161 (279)
T 3fdn_A 88 LEYAPLGTVYRELQKLS---KFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS 161 (279)
T ss_dssp ECCCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHH---TTTCEECCCCGGGEEECTTSCEEECSCCEESCC--
T ss_pred EecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---hCCEecccCChHhEEEcCCCCEEEEeccccccCCc
Confidence 99999999999987543 3899999999999999999999 78999999999999999999999999999865432
Q ss_pred CCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhH
Q 012219 328 DSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKI 407 (468)
Q Consensus 328 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (468)
.......|++.|+|||.+.+..++.++||||||+++|+|++|+.||........... ..............
T Consensus 162 --~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~-----~~~~~~~~~~~~~~-- 232 (279)
T 3fdn_A 162 --SRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR-----ISRVEFTFPDFVTE-- 232 (279)
T ss_dssp --------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHH-----HHHTCCCCCTTSCH--
T ss_pred --ccccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHH-----HHhCCCCCCCcCCH--
Confidence 223445789999999999999999999999999999999999999975432211110 00111112221221
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Q 012219 408 RQDIILVSTVAFSCLRSQPKSRPTMQLVSNEF 439 (468)
Q Consensus 408 ~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l 439 (468)
.+.+++.+||+.||++|||+++++++-
T Consensus 233 -----~~~~li~~~l~~~p~~Rps~~e~l~h~ 259 (279)
T 3fdn_A 233 -----GARDLISRLLKHNPSQRPMLREVLEHP 259 (279)
T ss_dssp -----HHHHHHHHHCCSSGGGSCCHHHHHHCH
T ss_pred -----HHHHHHHHHhccChhhCCCHHHHhhCc
Confidence 256789999999999999999999543
No 94
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=2e-44 Score=345.58 Aligned_cols=262 Identities=24% Similarity=0.364 Sum_probs=199.6
Q ss_pred hCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCC----EE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRK----CM 244 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----~~ 244 (468)
++|.+.+.||+|+||.||+|+. .+++.||||++...........+.|.+|++++.+++||||+++++++.... ..
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 91 (311)
T 3ork_A 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP 91 (311)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred CcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCccc
Confidence 6799999999999999999974 678999999998765544455678899999999999999999999987643 34
Q ss_pred EEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccccc
Q 012219 245 FLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARL 324 (468)
Q Consensus 245 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~ 324 (468)
++||||+++|+|.+++.... .+++.+++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 92 ~lv~e~~~g~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~ 165 (311)
T 3ork_A 92 YIVMEYVDGVTLRDIVHTEG---PMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARA 165 (311)
T ss_dssp EEEEECCCEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEETTSCEEECCCSCC--
T ss_pred EEEEecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEcCCCCEEEeeccCccc
Confidence 99999999999999997543 3899999999999999999999 77999999999999999999999999999987
Q ss_pred ccCCCC---CceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCC
Q 012219 325 LNFDSS---NRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSP 401 (468)
Q Consensus 325 ~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (468)
...... ......||+.|+|||++.+..++.++||||||+++|||+||+.||............. ......
T Consensus 166 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~-------~~~~~~ 238 (311)
T 3ork_A 166 IADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHV-------REDPIP 238 (311)
T ss_dssp ----------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH-------HCCCCC
T ss_pred ccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHh-------cCCCCC
Confidence 643222 2223468999999999999999999999999999999999999997544322111100 000000
Q ss_pred ccchhHHHHHHHHHHHHHhcccCCCCCCCCH-HHHHHHHHhcCCC
Q 012219 402 PVDQKIRQDIILVSTVAFSCLRSQPKSRPTM-QLVSNEFIARNKA 445 (468)
Q Consensus 402 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~-~~v~~~l~~~~~~ 445 (468)
. ..........+.+++.+||+.||++||++ +++.+.|.+....
T Consensus 239 ~-~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~ 282 (311)
T 3ork_A 239 P-SARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNG 282 (311)
T ss_dssp H-HHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHTT
T ss_pred c-ccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHhcC
Confidence 0 00000011226679999999999999975 6666778776544
No 95
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=3.2e-44 Score=365.35 Aligned_cols=258 Identities=26% Similarity=0.401 Sum_probs=208.8
Q ss_pred HhhCccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEE
Q 012219 168 ATEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFL 246 (468)
Q Consensus 168 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 246 (468)
..++|.+.+.||+|+||.||+|.+. ++..||||+++.... ..+.|.+|++++++++||||++++++|......++
T Consensus 218 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 293 (495)
T 1opk_A 218 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 293 (495)
T ss_dssp CGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS----CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred CHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc----chHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEE
Confidence 3467899999999999999999865 488999999986543 24679999999999999999999999999999999
Q ss_pred EEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccccccc
Q 012219 247 IYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLN 326 (468)
Q Consensus 247 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~ 326 (468)
||||+++|+|.+++..... ..+++..++.++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++...
T Consensus 294 v~E~~~~g~L~~~l~~~~~-~~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 369 (495)
T 1opk_A 294 ITEFMTYGNLLDYLRECNR-QEVSAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMT 369 (495)
T ss_dssp EEECCTTCBHHHHHHHSCT-TTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCEEECCTTCEECCT
T ss_pred EEEccCCCCHHHHHHhcCc-CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChhhEEECCCCcEEEeecccceecc
Confidence 9999999999999976432 34899999999999999999999 7799999999999999999999999999998764
Q ss_pred CCCCC-ceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCCCCCCccc
Q 012219 327 FDSSN-RTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVD 404 (468)
Q Consensus 327 ~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (468)
..... .....++..|+|||++....++.++|||||||++|||+| |+.||......... +.+.........
T Consensus 370 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~--------~~~~~~~~~~~~ 441 (495)
T 1opk_A 370 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY--------ELLEKDYRMERP 441 (495)
T ss_dssp TCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHH--------HHHHTTCCCCCC
T ss_pred CCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHH--------HHHHcCCCCCCC
Confidence 32211 112345678999999998899999999999999999999 99999765432111 111111111111
Q ss_pred hhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCC
Q 012219 405 QKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNK 444 (468)
Q Consensus 405 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~ 444 (468)
....+ .+.+++.+||+.||++|||+.++++.|+....
T Consensus 442 ~~~~~---~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~ 478 (495)
T 1opk_A 442 EGCPE---KVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 478 (495)
T ss_dssp TTCCH---HHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCS
T ss_pred CCCCH---HHHHHHHHHcCcChhHCcCHHHHHHHHHHHHh
Confidence 11111 26779999999999999999999999987643
No 96
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=1.3e-43 Score=332.67 Aligned_cols=254 Identities=20% Similarity=0.327 Sum_probs=204.6
Q ss_pred hCccccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeC--CEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHR--KCMFLI 247 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv 247 (468)
++|.+.+.||+|+||.||+|+.. ++.||||++....... ...+.|.+|++++++++||||+++++++... ...++|
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWST-RKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLI 87 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCH-HHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEE
T ss_pred HHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCH-HHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEee
Confidence 57899999999999999999984 8899999998654332 3356799999999999999999999999887 778999
Q ss_pred EEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEecCCCCCceeeCCCCCeEEeeccccccc
Q 012219 248 YEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPP--IVHRDISSNNVLLNSELEAFVADFGVARLL 325 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~--ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~ 325 (468)
|||+++|+|.+++..... ..+++..++.++.|++.||+||| +.+ ++||||||+||+++.++.++|+|||++...
T Consensus 88 ~e~~~~~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~ 163 (271)
T 3kmu_A 88 THWMPYGSLYNVLHEGTN-FVVDQSQAVKFALDMARGMAFLH---TLEPLIPRHALNSRSVMIDEDMTARISMADVKFSF 163 (271)
T ss_dssp EECCTTCBHHHHHHSCSS-CCCCHHHHHHHHHHHHHHHHHHT---TSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTT
T ss_pred ecccCCCcHHHHHhhccc-CCCCHHHHHHHHHHHHHHHHHHh---cCCCceecCCCccceEEEcCCcceeEEeccceeee
Confidence 999999999999986432 34899999999999999999999 667 999999999999999999999999987543
Q ss_pred cCCCCCceeccccccccccccccCCCCCc---cchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCc
Q 012219 326 NFDSSNRTLLAGTYGYIAPELAYTMVVTE---KCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPP 402 (468)
Q Consensus 326 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~---~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (468)
.. ....||+.|+|||.+.+..++. ++||||||+++|||+||+.||............ ......+.....
T Consensus 164 ~~-----~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~---~~~~~~~~~~~~ 235 (271)
T 3kmu_A 164 QS-----PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKV---ALEGLRPTIPPG 235 (271)
T ss_dssp SC-----TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHH---HHSCCCCCCCTT
T ss_pred cc-----cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHH---HhcCCCCCCCCC
Confidence 22 2246899999999998765544 799999999999999999999765432211110 011111222222
Q ss_pred cchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCC
Q 012219 403 VDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNK 444 (468)
Q Consensus 403 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~ 444 (468)
.+. .+.+++.+||+.||++|||++++++.|.+...
T Consensus 236 ~~~-------~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 236 ISP-------HVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp CCH-------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred CCH-------HHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 221 26679999999999999999999999988643
No 97
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.9e-43 Score=337.15 Aligned_cols=263 Identities=22% Similarity=0.290 Sum_probs=201.1
Q ss_pred hhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLI 247 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 247 (468)
.++|.+.+.||+|+||.||+|.. .+++.||+|++...........+.+.+|++++++++||||+++++++...+..++|
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 47899999999999999999975 47889999999876554444557889999999999999999999999999999999
Q ss_pred EEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccC
Q 012219 248 YEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNF 327 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~ 327 (468)
+||+++++|.+++.... .+++.+++.++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++.....
T Consensus 113 ~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 186 (309)
T 2h34_A 113 MRLINGVDLAAMLRRQG---PLAPPRAVAIVRQIGSALDAAH---AAGATHRDVKPENILVSADDFAYLVDFGIASATTD 186 (309)
T ss_dssp EECCCCEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSCCC------
T ss_pred EEecCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCcCCcCCCChHHEEEcCCCCEEEecCccCccccc
Confidence 99999999999997543 3899999999999999999999 77999999999999999999999999999977643
Q ss_pred CC-CCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchh
Q 012219 328 DS-SNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQK 406 (468)
Q Consensus 328 ~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (468)
.. .......|++.|+|||++.+..++.++||||||+++|||++|+.||.................. ........+.
T Consensus 187 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~- 263 (309)
T 2h34_A 187 EKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHINQAIPR--PSTVRPGIPV- 263 (309)
T ss_dssp ----------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHHHSCCCC--GGGTSTTCCT-
T ss_pred cccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHhccCCCC--ccccCCCCCH-
Confidence 22 2223456899999999999999999999999999999999999999754332111100000000 0011111111
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCC-CHHHHHHHHHhcCCCC
Q 012219 407 IRQDIILVSTVAFSCLRSQPKSRP-TMQLVSNEFIARNKAP 446 (468)
Q Consensus 407 ~~~~~~~l~~l~~~cl~~dP~~RP-s~~~v~~~l~~~~~~~ 446 (468)
.+.+++.+||+.||++|| +++++++.|++.....
T Consensus 264 ------~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~ 298 (309)
T 2h34_A 264 ------AFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATA 298 (309)
T ss_dssp ------HHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC--
T ss_pred ------HHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhh
Confidence 266789999999999999 9999999999876553
No 98
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=4.1e-43 Score=332.48 Aligned_cols=254 Identities=29% Similarity=0.475 Sum_probs=201.7
Q ss_pred hCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhh----hhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEEL----ASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCM 244 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 244 (468)
++|.+.+.||+|+||.||+|+. .+++.||+|++........ ...+.+.+|++++++++||||+++++++.+..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-- 96 (287)
T 4f0f_A 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-- 96 (287)
T ss_dssp TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--
T ss_pred ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--
Confidence 6799999999999999999975 5789999999975443221 12267889999999999999999999997766
Q ss_pred EEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEecCCCCCceeeCCCCC-----eEEe
Q 012219 245 FLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPP--IVHRDISSNNVLLNSELE-----AFVA 317 (468)
Q Consensus 245 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~--ivH~dlk~~NIll~~~~~-----~kl~ 317 (468)
++||||+++|+|.+++.... ..+++..++.++.|++.||+||| +.+ |+||||||+||+++.++. +||+
T Consensus 97 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~l~~~l~~lH---~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~ 171 (287)
T 4f0f_A 97 RMVMEFVPCGDLYHRLLDKA--HPIKWSVKLRLMLDIALGIEYMQ---NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVA 171 (287)
T ss_dssp EEEEECCTTCBHHHHHHCTT--SCCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCSCCSGGGEEESCCCTTCSCCEEEC
T ss_pred eEEEEecCCCCHHHHHhccc--CCccHHHHHHHHHHHHHHHHHHH---hCCCCeecCCCCcceEEEeccCCCCceeEEeC
Confidence 69999999999999887543 34899999999999999999999 667 999999999999988776 9999
Q ss_pred eccccccccCCCCCceecccccccccccccc--CCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhccccccccc
Q 012219 318 DFGVARLLNFDSSNRTLLAGTYGYIAPELAY--TMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLL 395 (468)
Q Consensus 318 Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~--~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 395 (468)
|||+++... .......|++.|+|||++. ...++.++|||||||++|||++|+.||.............. .....
T Consensus 172 Dfg~~~~~~---~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~-~~~~~ 247 (287)
T 4f0f_A 172 DFGLSQQSV---HSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMI-REEGL 247 (287)
T ss_dssp CCTTCBCCS---SCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHH-HHSCC
T ss_pred CCCcccccc---ccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHH-hccCC
Confidence 999997543 2344467899999999984 45678999999999999999999999976543322111100 01111
Q ss_pred CCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHh
Q 012219 396 DPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIA 441 (468)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~ 441 (468)
.+......+ ..+.+++.+||+.||++|||++++++.|++
T Consensus 248 ~~~~~~~~~-------~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ 286 (287)
T 4f0f_A 248 RPTIPEDCP-------PRLRNVIELCWSGDPKKRPHFSYIVKELSE 286 (287)
T ss_dssp CCCCCTTSC-------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred CCCCCcccC-------HHHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence 122222222 126779999999999999999999999975
No 99
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=1.7e-43 Score=336.28 Aligned_cols=255 Identities=23% Similarity=0.392 Sum_probs=208.7
Q ss_pred hCccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
++|.+.+.||+|+||.||++... +++.+|+|++...........+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 94 (294)
T 2rku_A 15 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL 94 (294)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEE
Confidence 57899999999999999999764 68899999997654333345577889999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||+++++|.+++.... .+++.+++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 95 e~~~~~~L~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 168 (294)
T 2rku_A 95 ELCRRRSLLELHKRRK---ALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 168 (294)
T ss_dssp ECCTTCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECCST
T ss_pred ecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEcCCCCEEEEeccCceecccC
Confidence 9999999999887543 3899999999999999999999 779999999999999999999999999999877544
Q ss_pred CCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHH
Q 012219 329 SSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIR 408 (468)
Q Consensus 329 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (468)
........|++.|+|||++.+..++.++||||||+++|||++|+.||.............. ..........
T Consensus 169 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~---- 239 (294)
T 2rku_A 169 GERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKK-----NEYSIPKHIN---- 239 (294)
T ss_dssp TCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHT-----TCCCCCTTSC----
T ss_pred ccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhh-----ccCCCccccC----
Confidence 4445556799999999999998899999999999999999999999975432211110000 0111111111
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCHHHHHHH-HHhc
Q 012219 409 QDIILVSTVAFSCLRSQPKSRPTMQLVSNE-FIAR 442 (468)
Q Consensus 409 ~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~-l~~~ 442 (468)
. .+.+++.+||+.||++|||+++++++ +...
T Consensus 240 ~---~~~~li~~~l~~~p~~Rps~~~ll~~~~~~~ 271 (294)
T 2rku_A 240 P---VAASLIQKMLQTDPTARPTINELLNDEFFTS 271 (294)
T ss_dssp H---HHHHHHHHHTCSSGGGSCCGGGGGGSHHHHT
T ss_pred H---HHHHHHHHHcccChhhCcCHHHHhhChheec
Confidence 1 26678999999999999999999964 4443
No 100
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=6.6e-44 Score=345.50 Aligned_cols=261 Identities=25% Similarity=0.367 Sum_probs=207.8
Q ss_pred hhCccccceeeeeCCceEEEEEc--------CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhc-cCCceeeEEEEEe
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL--------PSGKVVALKKLHRSETEELASLESFGNEARLLSQI-RHRNIVKLYGFCL 239 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~--------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~ 239 (468)
.++|.+.+.||+|+||.||+|.. .++..||+|++...... ...+.+.+|+++++++ +||||+++++++.
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~ 111 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE--KDLSDLVSEMEMMKMIGKHKNIINLLGACT 111 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCH--HHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcH--HHHHHHHHHHHHHHHhhcCCCEeeEEEEEc
Confidence 46899999999999999999975 35678999999865432 3456788999999999 8999999999999
Q ss_pred eCCEEEEEEEeccCCChhhhhhcCcc-------------cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCce
Q 012219 240 HRKCMFLIYEYMEMGSLFCVLRTDEE-------------AVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNV 306 (468)
Q Consensus 240 ~~~~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NI 306 (468)
..+..++||||+++|+|.+++..... ...+++.+++.++.||+.||.||| +.+|+||||||+||
T Consensus 112 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NI 188 (334)
T 2pvf_A 112 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNV 188 (334)
T ss_dssp SSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGE
T ss_pred cCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCccceE
Confidence 99999999999999999999976432 224889999999999999999999 77999999999999
Q ss_pred eeCCCCCeEEeeccccccccCCCC--CceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccch
Q 012219 307 LLNSELEAFVADFGVARLLNFDSS--NRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSW 383 (468)
Q Consensus 307 ll~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~ 383 (468)
+++.++.+||+|||+++....... ......+++.|+|||++.+..++.++||||||+++|||+| |+.||........
T Consensus 189 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~ 268 (334)
T 2pvf_A 189 LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 268 (334)
T ss_dssp EECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH
T ss_pred EEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHH
Confidence 999999999999999987653322 1223356788999999988889999999999999999999 9999875433211
Q ss_pred hhhcccccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCCC
Q 012219 384 SLDKNIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNKA 445 (468)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~~ 445 (468)
... .............. ..+.+++.+||+.||++|||+.++++.|.++...
T Consensus 269 ~~~----~~~~~~~~~~~~~~-------~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~ 319 (334)
T 2pvf_A 269 FKL----LKEGHRMDKPANCT-------NELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 319 (334)
T ss_dssp HHH----HHHTCCCCCCTTCC-------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHH----HhcCCCCCCCccCC-------HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 110 00111111111111 1267799999999999999999999999887543
No 101
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=3.7e-44 Score=361.03 Aligned_cols=258 Identities=25% Similarity=0.403 Sum_probs=203.5
Q ss_pred HhhCccccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEE
Q 012219 168 ATEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLI 247 (468)
Q Consensus 168 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 247 (468)
..++|.+.+.||+|+||.||+|.+.++..||||+++..... .+.|.+|++++++++||||+++++++.+ +..++|
T Consensus 182 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv 256 (452)
T 1fmk_A 182 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 256 (452)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSC----HHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEE
T ss_pred ChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCCC----HHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEE
Confidence 35678999999999999999999988888999999865432 3678999999999999999999999976 568999
Q ss_pred EEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccC
Q 012219 248 YEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNF 327 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~ 327 (468)
|||+++|+|.+++.... ...+++.+++.++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++....
T Consensus 257 ~e~~~~gsL~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 332 (452)
T 1fmk_A 257 TEYMSKGSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIED 332 (452)
T ss_dssp ECCCTTCBHHHHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCCTTC----
T ss_pred ehhhcCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEECCCCCEEECCCccceecCC
Confidence 99999999999997532 234889999999999999999999 77999999999999999999999999999987643
Q ss_pred CCC-CceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCCCCCCccch
Q 012219 328 DSS-NRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQ 405 (468)
Q Consensus 328 ~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (468)
... ......++..|+|||++....++.++|||||||++|||+| |+.||........... .............+
T Consensus 333 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~----i~~~~~~~~~~~~~- 407 (452)
T 1fmk_A 333 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ----VERGYRMPCPPECP- 407 (452)
T ss_dssp ----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHH----HHTTCCCCCCTTSC-
T ss_pred CceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHH----HHcCCCCCCCCCCC-
Confidence 221 1223456788999999998899999999999999999999 9999976543211110 00101111111111
Q ss_pred hHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCCC
Q 012219 406 KIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNKA 445 (468)
Q Consensus 406 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~~ 445 (468)
+ .+.+++.+||+.||++|||++++++.|+.....
T Consensus 408 ---~---~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~ 441 (452)
T 1fmk_A 408 ---E---SLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 441 (452)
T ss_dssp ---H---HHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred ---H---HHHHHHHHHccCChhhCcCHHHHHHHHHHHhcc
Confidence 1 267799999999999999999999999887544
No 102
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=1.3e-43 Score=346.64 Aligned_cols=253 Identities=24% Similarity=0.310 Sum_probs=191.0
Q ss_pred hhCccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLI 247 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 247 (468)
.++|.+.+.||+|+||.||+++.. +++.||||++...... .+.+.+|+.+++.++||||+++++++...+..++|
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 94 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAI----DENVQREIINHRSLRHPNIVRFKEVILTPTHLAII 94 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTS----CHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccc----cHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEE
Confidence 367999999999999999999764 7899999999765432 25678999999999999999999999999999999
Q ss_pred EEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCC--eEEeeccccccc
Q 012219 248 YEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELE--AFVADFGVARLL 325 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~--~kl~Dfg~~~~~ 325 (468)
|||+++|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++. +||+|||+++..
T Consensus 95 ~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~ql~~~L~~LH---~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~ 168 (361)
T 3uc3_A 95 MEYASGGELYERICNAG---RFSEDEARFFFQQLLSGVSYCH---SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSS 168 (361)
T ss_dssp EECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHH---HTTCCSCCCCGGGEEECSSSSCCEEECCCCCC---
T ss_pred EEeCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCceEEEeecCccccc
Confidence 99999999999987543 3899999999999999999999 779999999999999987765 999999999754
Q ss_pred cCCCCCceeccccccccccccccCCCCCcc-chhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccc
Q 012219 326 NFDSSNRTLLAGTYGYIAPELAYTMVVTEK-CDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVD 404 (468)
Q Consensus 326 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~-~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (468)
.. ........||+.|+|||++.+..++.+ +|||||||++|||++|+.||............. ..........+..
T Consensus 169 ~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~---~~~~~~~~~~~~~ 244 (361)
T 3uc3_A 169 VL-HSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTI---QRILSVKYSIPDD 244 (361)
T ss_dssp -------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHH---HHHHTTCCCCCTT
T ss_pred cc-cCCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHH---HHHhcCCCCCCCc
Confidence 32 222334579999999999988877655 899999999999999999997543321111100 0111111111110
Q ss_pred hhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 405 QKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 405 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
..... .+.+++.+||+.||++|||+.+++++
T Consensus 245 ~~~s~---~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 245 IRISP---ECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp SCCCH---HHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred CCCCH---HHHHHHHHHccCChhHCcCHHHHHhC
Confidence 00111 26679999999999999999999954
No 103
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=3.6e-44 Score=347.14 Aligned_cols=262 Identities=24% Similarity=0.357 Sum_probs=207.6
Q ss_pred HHhhCccccceeeeeCCceEEEEEcCC------CCEEEEEEecCcchhhhhhHHHHHHHHHHHhhc-cCCceeeEEEEEe
Q 012219 167 EATEDFHIKYCIGTGGYGSVYRARLPS------GKVVALKKLHRSETEELASLESFGNEARLLSQI-RHRNIVKLYGFCL 239 (468)
Q Consensus 167 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~ 239 (468)
...++|.+.+.||+|+||.||+|.... ...||+|.+...... ...+.+.+|+++++++ +||||+++++++.
T Consensus 43 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 120 (333)
T 2i1m_A 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHA--DEKEALMSELKIMSHLGQHENIVNLLGACT 120 (333)
T ss_dssp CCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCH--HHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred CCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccCh--HHHHHHHHHHHHHHhhcCCCCeeeEEEEEe
Confidence 345789999999999999999997532 347999999865433 2356789999999999 8999999999999
Q ss_pred eCCEEEEEEEeccCCChhhhhhcCcc-----------cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee
Q 012219 240 HRKCMFLIYEYMEMGSLFCVLRTDEE-----------AVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLL 308 (468)
Q Consensus 240 ~~~~~~lv~e~~~~gsL~~~l~~~~~-----------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll 308 (468)
..+..++||||+++|+|.+++..... ...+++..++.++.|++.||.||| +.+|+||||||+||++
T Consensus 121 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~ 197 (333)
T 2i1m_A 121 HGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLL 197 (333)
T ss_dssp SSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGCEE
T ss_pred cCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCcccceEEE
Confidence 99999999999999999999875321 234789999999999999999999 7799999999999999
Q ss_pred CCCCCeEEeeccccccccCCCCC--ceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhh
Q 012219 309 NSELEAFVADFGVARLLNFDSSN--RTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSL 385 (468)
Q Consensus 309 ~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~ 385 (468)
+.++.+||+|||+++........ .....+++.|+|||++.+..++.++|||||||++|||+| |..||..........
T Consensus 198 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~ 277 (333)
T 2i1m_A 198 TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFY 277 (333)
T ss_dssp EGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHH
T ss_pred CCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHH
Confidence 99999999999999866433222 223456788999999998899999999999999999999 999987644322111
Q ss_pred hcccccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcC
Q 012219 386 DKNIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARN 443 (468)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~ 443 (468)
... ............+ ..+.+++.+||+.||.+|||+.++++.|+...
T Consensus 278 ~~~---~~~~~~~~~~~~~-------~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~ 325 (333)
T 2i1m_A 278 KLV---KDGYQMAQPAFAP-------KNIYSIMQACWALEPTHRPTFQQICSFLQEQA 325 (333)
T ss_dssp HHH---HHTCCCCCCTTCC-------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHH---hcCCCCCCCCCCC-------HHHHHHHHHHhccChhhCcCHHHHHHHHHHHH
Confidence 100 0001111111111 12667999999999999999999999998753
No 104
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=6.6e-44 Score=344.87 Aligned_cols=258 Identities=17% Similarity=0.214 Sum_probs=204.2
Q ss_pred hCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhc-cCCceeeEEEEEeeCCEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQI-RHRNIVKLYGFCLHRKCMFLI 247 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 247 (468)
++|.+.+.||+|+||.||+|.. .+++.||||++...... +.+.+|+++++++ +||||+++++++...+..++|
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv 83 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRA-----PQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMV 83 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCSS-----CCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEE
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccch-----HHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEE
Confidence 5799999999999999999974 67899999998755332 3577999999999 999999999999999999999
Q ss_pred EEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCC-----eEEeecccc
Q 012219 248 YEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELE-----AFVADFGVA 322 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~-----~kl~Dfg~~ 322 (468)
|||+ +++|.+++.... ..+++..++.++.|++.||+||| +.+|+||||||+||+++.++. +||+|||++
T Consensus 84 ~e~~-~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH---~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a 157 (330)
T 2izr_A 84 LELL-GPSLEDLFDLCD--RTFSLKTVLMIAIQLISRMEYVH---SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALA 157 (330)
T ss_dssp EECC-CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTC
T ss_pred EEeC-CCCHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeeeccCCCCCCceEEEEEcccc
Confidence 9999 999999998642 34899999999999999999999 779999999999999999887 999999999
Q ss_pred ccccCCCCC-------ceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhccccccccc
Q 012219 323 RLLNFDSSN-------RTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLL 395 (468)
Q Consensus 323 ~~~~~~~~~-------~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 395 (468)
+........ .....||+.|+|||++.+..++.++|||||||++|||++|+.||........... ...+...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~-~~~i~~~- 235 (330)
T 2izr_A 158 KEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKER-YQKIGDT- 235 (330)
T ss_dssp EESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHH-HHHHHHH-
T ss_pred eeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHH-HHHHHhh-
Confidence 876433221 2346799999999999999999999999999999999999999986432211000 0000000
Q ss_pred CCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcC
Q 012219 396 DPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARN 443 (468)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~ 443 (468)
....+..... .....+.+++..||+.||.+||+++++.+.|....
T Consensus 236 --~~~~~~~~~~-~~~p~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~ 280 (330)
T 2izr_A 236 --KRATPIEVLC-ENFPEMATYLRYVRRLDFFEKPDYDYLRKLFTDLF 280 (330)
T ss_dssp --HHHSCHHHHT-TTCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHH
T ss_pred --hccCCHHHHh-ccChHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHH
Confidence 0000000000 00014778999999999999999999999887553
No 105
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=5e-44 Score=344.72 Aligned_cols=251 Identities=23% Similarity=0.287 Sum_probs=177.2
Q ss_pred cceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhcc-CCceeeEEEEEeeCCEEEEEEEecc
Q 012219 175 KYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIR-HRNIVKLYGFCLHRKCMFLIYEYME 252 (468)
Q Consensus 175 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~ 252 (468)
.+.||+|+||.||+|.. .+++.||||++.... ...+.+|++++..+. ||||+++++++.+....++||||++
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 89 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKRM------EANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLN 89 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGGG------HHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChhh------hhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccC
Confidence 37899999999999976 468999999996532 246678999999997 9999999999999999999999999
Q ss_pred CCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCC---CeEEeeccccccccCCC
Q 012219 253 MGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSEL---EAFVADFGVARLLNFDS 329 (468)
Q Consensus 253 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~---~~kl~Dfg~~~~~~~~~ 329 (468)
+|+|.+++.... .+++.++..++.||+.||+||| +.+|+||||||+||+++.++ .+||+|||+++......
T Consensus 90 ~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 163 (325)
T 3kn6_A 90 GGELFERIKKKK---HFSETEASYIMRKLVSAVSHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN 163 (325)
T ss_dssp SCBHHHHHHHCS---CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC--
T ss_pred CCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCC
Confidence 999999998653 4899999999999999999999 77999999999999998765 89999999998765554
Q ss_pred CCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHHH
Q 012219 330 SNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQ 409 (468)
Q Consensus 330 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (468)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||..................+........ ......
T Consensus 164 ~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~ 242 (325)
T 3kn6_A 164 QPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFE-GEAWKN 242 (325)
T ss_dssp --------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCC-SHHHHT
T ss_pred CcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCC-cccccC
Confidence 4555667899999999999999999999999999999999999999754321100000000011111111111 111111
Q ss_pred HHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 410 DIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 410 ~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
....+.+++.+||+.||++|||+++++++
T Consensus 243 ~s~~~~~li~~~L~~dP~~Rpt~~ell~h 271 (325)
T 3kn6_A 243 VSQEAKDLIQGLLTVDPNKRLKMSGLRYN 271 (325)
T ss_dssp SCHHHHHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred CCHHHHHHHHHHCCCChhHCCCHHHHhcC
Confidence 12237789999999999999999998843
No 106
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=1.1e-43 Score=335.35 Aligned_cols=256 Identities=26% Similarity=0.365 Sum_probs=193.9
Q ss_pred hhCccccceeeeeCCceEEEEEcCC----CCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARLPS----GKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCM 244 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 244 (468)
.++|.+.+.||+|+||.||+|.... +..||+|++...... ...+.|.+|+.++++++||||+++++++. .+..
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~ 90 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSD--SVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPV 90 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSH--HHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSC
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCH--HHHHHHHHHHHHHHhCCCCccceEEEEEc-cCcc
Confidence 4679999999999999999997642 457999998764332 34567899999999999999999999985 4567
Q ss_pred EEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccccc
Q 012219 245 FLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARL 324 (468)
Q Consensus 245 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~ 324 (468)
++||||+++|+|.+++.... ..+++..++.++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 165 (281)
T 1mp8_A 91 WIIMELCTLGELRSFLQVRK--YSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY 165 (281)
T ss_dssp EEEEECCTTEEHHHHHHHTT--TTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECC------
T ss_pred EEEEecCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHH---hCCeecccccHHHEEECCCCCEEECccccccc
Confidence 89999999999999997643 24899999999999999999999 77999999999999999999999999999987
Q ss_pred ccCCCC-CceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCCCCCCc
Q 012219 325 LNFDSS-NRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDPRLSPP 402 (468)
Q Consensus 325 ~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (468)
...... ......+++.|+|||++....++.++||||||+++|||++ |+.||........... +...........
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~----i~~~~~~~~~~~ 241 (281)
T 1mp8_A 166 MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGR----IENGERLPMPPN 241 (281)
T ss_dssp -------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHH----HHTTCCCCCCTT
T ss_pred cCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHH----HHcCCCCCCCCC
Confidence 643222 1223456788999999998899999999999999999997 9999976543221110 000001111121
Q ss_pred cchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcC
Q 012219 403 VDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARN 443 (468)
Q Consensus 403 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~ 443 (468)
.+ ..+.+++.+||+.||++|||+.++++.|..+.
T Consensus 242 ~~-------~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 275 (281)
T 1mp8_A 242 CP-------PTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 275 (281)
T ss_dssp CC-------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CC-------HHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 22 12667999999999999999999999998753
No 107
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=1.5e-43 Score=340.36 Aligned_cols=264 Identities=21% Similarity=0.298 Sum_probs=189.4
Q ss_pred hhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLI 247 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 247 (468)
.++|.+.+.||+|+||.||+|.. .+++.||+|++...... ...+.+.+|++++++++||||+++++++...+..++|
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 81 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEE--GTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLV 81 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTT--CSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeeccccc--ccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEE
Confidence 46789999999999999999976 46899999999765432 2335688999999999999999999999999999999
Q ss_pred EEeccCCChhhhhhcCc---ccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccccc
Q 012219 248 YEYMEMGSLFCVLRTDE---EAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARL 324 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~ 324 (468)
|||++ |+|.+++.... ....+++..+..++.||+.||.||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 82 ~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~ 157 (317)
T 2pmi_A 82 FEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLARA 157 (317)
T ss_dssp EECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCSSCEE
T ss_pred EEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCChHHeEEcCCCCEEECcCcccee
Confidence 99998 59998886532 2234889999999999999999999 77999999999999999999999999999987
Q ss_pred ccCCCCCceeccccccccccccccC-CCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhc-----------ccccc
Q 012219 325 LNFDSSNRTLLAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDK-----------NIKLI 392 (468)
Q Consensus 325 ~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~-----------~~~~~ 392 (468)
............||+.|+|||++.+ ..++.++|||||||++|||+||+.||............ .....
T Consensus 158 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 237 (317)
T 2pmi_A 158 FGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVT 237 (317)
T ss_dssp TTSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGG
T ss_pred cCCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhh
Confidence 7544444455678999999999876 46899999999999999999999999754321110000 00000
Q ss_pred c--ccCCCCCCccchhHHH---------HHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 393 D--LLDPRLSPPVDQKIRQ---------DIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 393 ~--~~~~~~~~~~~~~~~~---------~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
. ...+...........+ ....+.+++.+||+.||++|||+++++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 294 (317)
T 2pmi_A 238 KLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH 294 (317)
T ss_dssp GCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred hhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence 0 0000000000000000 01237789999999999999999999853
No 108
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=5.7e-44 Score=349.86 Aligned_cols=247 Identities=23% Similarity=0.344 Sum_probs=192.5
Q ss_pred hhCccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHH-HhhccCCceeeEEEEEeeCCEEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARL-LSQIRHRNIVKLYGFCLHRKCMFL 246 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~-l~~l~h~niv~l~~~~~~~~~~~l 246 (468)
.++|.+.+.||+|+||.||+|+.. +++.||+|++...........+.+.+|..+ ++.++||||+++++++.+.+..++
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 367999999999999999999764 688999999986654333344566677776 577899999999999999999999
Q ss_pred EEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccccccc
Q 012219 247 IYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLN 326 (468)
Q Consensus 247 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~ 326 (468)
||||+++|+|.+++.... .+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++...
T Consensus 117 v~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~ 190 (373)
T 2r5t_A 117 VLDYINGGELFYHLQRER---CFLEPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENI 190 (373)
T ss_dssp EEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGB
T ss_pred EEeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEeeCccccccc
Confidence 999999999999997643 3889999999999999999999 7799999999999999999999999999998754
Q ss_pred CCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchh
Q 012219 327 FDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQK 406 (468)
Q Consensus 327 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (468)
.........+||+.|+|||++.+..++.++|||||||++|||++|+.||......... . .+... ...+......
T Consensus 191 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~-~---~i~~~-~~~~~~~~~~- 264 (373)
T 2r5t_A 191 EHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMY-D---NILNK-PLQLKPNITN- 264 (373)
T ss_dssp CCCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHH-H---HHHHS-CCCCCSSSCH-
T ss_pred cCCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHH-H---HHHhc-ccCCCCCCCH-
Confidence 4444455678999999999999999999999999999999999999999754322111 0 00000 1111222221
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCCHH
Q 012219 407 IRQDIILVSTVAFSCLRSQPKSRPTMQ 433 (468)
Q Consensus 407 ~~~~~~~l~~l~~~cl~~dP~~RPs~~ 433 (468)
.+.+++.+||+.||++||++.
T Consensus 265 ------~~~~li~~lL~~dp~~R~~~~ 285 (373)
T 2r5t_A 265 ------SARHLLEGLLQKDRTKRLGAK 285 (373)
T ss_dssp ------HHHHHHHHHTCSSGGGSTTTT
T ss_pred ------HHHHHHHHHcccCHHhCCCCC
Confidence 256789999999999999974
No 109
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=5.9e-44 Score=344.45 Aligned_cols=257 Identities=25% Similarity=0.330 Sum_probs=199.8
Q ss_pred hCccccceeeeeCCceEEEEEcC-CCCE----EEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLP-SGKV----VALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCM 244 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~----vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 244 (468)
++|.+.+.||+|+||.||+|... +++. ||+|.+...... ...+.+.+|+.++++++||||+++++++.. ...
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~ 89 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGR--QSFQAVTDHMLAIGSLDHAHIVRLLGLCPG-SSL 89 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSC--SCBCSCCHHHHHHHTCCCTTBCCEEEEECB-SSE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccH--HHHHHHHHHHHHHhcCCCCCcCeEEEEEcC-Ccc
Confidence 57889999999999999999753 4443 788887544322 223457789999999999999999999874 458
Q ss_pred EEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccccc
Q 012219 245 FLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARL 324 (468)
Q Consensus 245 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~ 324 (468)
++|+||+++|+|.+++..... .+++..++.++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++.
T Consensus 90 ~~v~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~ 164 (325)
T 3kex_A 90 QLVTQYLPLGSLLDHVRQHRG--ALGPQLLLNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADL 164 (325)
T ss_dssp EEEEECCTTCBSHHHHHSSGG--GSCTTHHHHHHHHHHHHHHHHH---HTTCCCSCCSSTTEEESSSSCEEECSCSGGGG
T ss_pred EEEEEeCCCCCHHHHHHHccc--cCCHHHHHHHHHHHHHHHHHHH---hCCCCCCccchheEEECCCCeEEECCCCcccc
Confidence 899999999999999976532 4888999999999999999999 77999999999999999999999999999988
Q ss_pred ccCCCC--CceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCCCCCC
Q 012219 325 LNFDSS--NRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDPRLSP 401 (468)
Q Consensus 325 ~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (468)
...... ......++..|+|||++.+..++.++|||||||++|||+| |+.||............ ..........
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~----~~~~~~~~~~ 240 (325)
T 3kex_A 165 LPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLL----EKGERLAQPQ 240 (325)
T ss_dssp SCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHH----HTTCBCCCCT
T ss_pred cCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHH----HcCCCCCCCC
Confidence 754322 2334567889999999998999999999999999999999 99999765432211110 0000111111
Q ss_pred ccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCCC
Q 012219 402 PVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNKA 445 (468)
Q Consensus 402 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~~ 445 (468)
.... .+.+++.+||+.||++|||+.++++.|......
T Consensus 241 ~~~~-------~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~ 277 (325)
T 3kex_A 241 ICTI-------DVYMVMVKCWMIDENIRPTFKELANEFTRMARD 277 (325)
T ss_dssp TBCT-------TTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTS
T ss_pred cCcH-------HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 1111 155688899999999999999999999887543
No 110
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=7.3e-44 Score=335.51 Aligned_cols=248 Identities=22% Similarity=0.314 Sum_probs=179.9
Q ss_pred hCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
++|.+.+.||+|+||.||+|.. .+++.||+|++...........+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence 5799999999999999999975 578999999998765544445678889999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||+ +++|.+++.... .+++.+++.++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 93 e~~-~~~l~~~~~~~~---~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 165 (275)
T 2eue_A 93 EYA-GNELFDYIVQRD---KMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG 165 (275)
T ss_dssp ECC-CEEHHHHHHTSS---SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCSSCC------
T ss_pred hhc-CCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCCeeccCChHhEEECCCCCEEEeecccceeccCc
Confidence 999 678888876543 3899999999999999999999 779999999999999999999999999999766432
Q ss_pred CCCceeccccccccccccccCCCC-CccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhH
Q 012219 329 SSNRTLLAGTYGYIAPELAYTMVV-TEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKI 407 (468)
Q Consensus 329 ~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (468)
.......||+.|+|||.+.+..+ +.++||||||+++|||++|+.||............... ........+.
T Consensus 166 -~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~-----~~~~~~~~~~-- 237 (275)
T 2eue_A 166 -NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNG-----VYTLPKFLSP-- 237 (275)
T ss_dssp ----------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT-----CCCCCTTSCH--
T ss_pred -ccccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC-----CCCCCccCCH--
Confidence 22334568999999999987765 78999999999999999999999754322111110000 0111111121
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 012219 408 RQDIILVSTVAFSCLRSQPKSRPTMQLVSN 437 (468)
Q Consensus 408 ~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~ 437 (468)
.+.+++.+||+.||++|||++|+++
T Consensus 238 -----~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 238 -----GAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp -----HHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred -----HHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 2667999999999999999999984
No 111
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=7.8e-44 Score=333.63 Aligned_cols=256 Identities=26% Similarity=0.394 Sum_probs=207.9
Q ss_pred hhCccccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
.++|.+.+.||+|+||.||+|...+++.||+|++...... .+.+.+|++++++++||||+++++++...+..++||
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 82 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS----EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVT 82 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBC----HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCCC----HHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEE
Confidence 3578899999999999999999888899999999865433 357889999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||+++++|.+++.... ..+++..++.++.|++.||.||| +.+++||||||+||+++.++.+||+|||+++.....
T Consensus 83 e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~ 157 (267)
T 3t9t_A 83 EFMEHGCLSDYLRTQR--GLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD 157 (267)
T ss_dssp CCCTTCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCH
T ss_pred eCCCCCcHHHHHhhCc--ccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEECCCCCEEEcccccccccccc
Confidence 9999999999997643 24889999999999999999999 779999999999999999999999999999865321
Q ss_pred C-CCceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCCCCCCccchh
Q 012219 329 S-SNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQK 406 (468)
Q Consensus 329 ~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (468)
. .......++..|+|||++.+..++.++||||||+++|||++ |+.||........... .............+
T Consensus 158 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~----i~~~~~~~~~~~~~-- 231 (267)
T 3t9t_A 158 QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVED----ISTGFRLYKPRLAS-- 231 (267)
T ss_dssp HHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHH----HHTTCCCCCCTTSC--
T ss_pred cccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHH----HhcCCcCCCCccCc--
Confidence 1 11122356778999999998889999999999999999999 8999875432211110 00101111111111
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCC
Q 012219 407 IRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNK 444 (468)
Q Consensus 407 ~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~ 444 (468)
. .+.+++.+||+.||++|||+.++++.|.++.+
T Consensus 232 --~---~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (267)
T 3t9t_A 232 --T---HVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 264 (267)
T ss_dssp --H---HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --H---HHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 1 26679999999999999999999999987643
No 112
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=4.6e-44 Score=350.71 Aligned_cols=265 Identities=17% Similarity=0.229 Sum_probs=201.5
Q ss_pred hhCccccceeeeeCCceEEEEEcCC------CCEEEEEEecCcchhhhhhH--------HHHHHHHHHHhhccCCceeeE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARLPS------GKVVALKKLHRSETEELASL--------ESFGNEARLLSQIRHRNIVKL 234 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~~~~--------~~~~~e~~~l~~l~h~niv~l 234 (468)
.++|.+.+.||+|+||.||+|.+.+ ++.||||++........... ..+..|+..+..++||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 4579999999999999999998654 47899999876653211111 234456667788899999999
Q ss_pred EEEEeeC----CEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeC-
Q 012219 235 YGFCLHR----KCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLN- 309 (468)
Q Consensus 235 ~~~~~~~----~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~- 309 (468)
++++... ...++||||+ +++|.+++.... ..+++..++.++.||+.||+||| +.+|+||||||+|||++
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~--~~l~~~~~~~i~~qi~~~l~~lH---~~~iiHrDlkp~Nill~~ 187 (364)
T 3op5_A 114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANA--KRFSRKTVLQLSLRILDILEYIH---EHEYVHGDIKASNLLLNY 187 (364)
T ss_dssp EEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEES
T ss_pred EeeeeeccCCcceEEEEEeCC-CCCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeEEecCCHHHEEEec
Confidence 9998764 4589999999 999999997643 34899999999999999999999 77999999999999999
Q ss_pred -CCCCeEEeeccccccccCCCC-------CceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCccccc
Q 012219 310 -SELEAFVADFGVARLLNFDSS-------NRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSS 381 (468)
Q Consensus 310 -~~~~~kl~Dfg~~~~~~~~~~-------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~ 381 (468)
.++.+||+|||+++.+..... ......||+.|+|||++.+..++.++|||||||++|||+||+.||......
T Consensus 188 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~ 267 (364)
T 3op5_A 188 KNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKD 267 (364)
T ss_dssp SCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC
T ss_pred CCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccC
Confidence 889999999999987643221 113345999999999999999999999999999999999999999853322
Q ss_pred chhhh-----cccccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCCC
Q 012219 382 SWSLD-----KNIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNKA 445 (468)
Q Consensus 382 ~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~~ 445 (468)
..... ......+.+++.+... .....+.+++..||+.||++||+++++++.|......
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~ 330 (364)
T 3op5_A 268 PKYVRDSKIRYRENIASLMDKCFPAA------NAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKA 330 (364)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHSCTT------CCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhhHHHHHHHhcccc------cCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Confidence 11110 0011112222111100 0012367899999999999999999999998776543
No 113
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=3.7e-43 Score=347.41 Aligned_cols=265 Identities=20% Similarity=0.299 Sum_probs=203.3
Q ss_pred hhCccccceeeee--CCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEE
Q 012219 169 TEDFHIKYCIGTG--GYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMF 245 (468)
Q Consensus 169 ~~~~~~~~~lg~G--~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 245 (468)
.++|.+.+.||+| +||.||+|+.. +++.||||++....... ...+.+.+|+++++.++||||+++++++...+..+
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 102 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSN-EMVTFLQGELHVSKLFNHPNIVPYRATFIADNELW 102 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCH-HHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccCh-HHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEE
Confidence 4679999999999 99999999764 79999999997654332 34567889999999999999999999999999999
Q ss_pred EEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccc
Q 012219 246 LIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLL 325 (468)
Q Consensus 246 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~ 325 (468)
+||||+++|+|.+++..... ..+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||.+...
T Consensus 103 lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~ 178 (389)
T 3gni_B 103 VVTSFMAYGSAKDLICTHFM-DGMNELAIAYILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSNLSM 178 (389)
T ss_dssp EEEECCTTCBHHHHHHHTCT-TCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred EEEEccCCCCHHHHHhhhcc-cCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEcccccceee
Confidence 99999999999999976532 33899999999999999999999 779999999999999999999999999988654
Q ss_pred cCCC-------CCceeccccccccccccccC--CCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhccc-cccccc
Q 012219 326 NFDS-------SNRTLLAGTYGYIAPELAYT--MVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNI-KLIDLL 395 (468)
Q Consensus 326 ~~~~-------~~~~~~~g~~~y~aPE~~~~--~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~-~~~~~~ 395 (468)
.... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.............. ......
T Consensus 179 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 258 (389)
T 3gni_B 179 ISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLL 258 (389)
T ss_dssp EETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC---------
T ss_pred ccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccc
Confidence 2211 11222468899999999987 6799999999999999999999999976443222111100 000000
Q ss_pred CCCCCC---------------------------------ccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 396 DPRLSP---------------------------------PVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 396 ~~~~~~---------------------------------~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
+..... ............+.+++.+||+.||++|||+.+++++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h 334 (389)
T 3gni_B 259 DTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 334 (389)
T ss_dssp -----------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred cccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence 000000 0000000011237789999999999999999999854
No 114
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=2.2e-43 Score=341.86 Aligned_cols=256 Identities=23% Similarity=0.392 Sum_probs=209.1
Q ss_pred hhCccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLI 247 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 247 (468)
.++|.+.+.||+|+||.||++... +++.||+|++...........+.+.+|+.+++.++|+||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 367999999999999999999754 5889999999765433334557788999999999999999999999999999999
Q ss_pred EEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccC
Q 012219 248 YEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNF 327 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~ 327 (468)
|||+++++|.+++.... .+++.+++.++.||+.||.||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 120 ~e~~~~~~L~~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 193 (335)
T 2owb_A 120 LELCRRRSLLELHKRRK---ALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY 193 (335)
T ss_dssp ECCCTTCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred EecCCCCCHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHH---HCCCEecCCCchhEEEcCCCCEEEeeccCceeccc
Confidence 99999999999887543 3899999999999999999999 77999999999999999999999999999987754
Q ss_pred CCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhH
Q 012219 328 DSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKI 407 (468)
Q Consensus 328 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (468)
.........|++.|+|||++.+..++.++||||||+++|||++|+.||.............. ....+......
T Consensus 194 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~-----~~~~~~~~~~~-- 266 (335)
T 2owb_A 194 DGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKK-----NEYSIPKHINP-- 266 (335)
T ss_dssp TTCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHH-----TCCCCCTTSCH--
T ss_pred CcccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhc-----CCCCCCccCCH--
Confidence 44445556799999999999998999999999999999999999999975432211110000 01111111211
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHH-HHHhc
Q 012219 408 RQDIILVSTVAFSCLRSQPKSRPTMQLVSN-EFIAR 442 (468)
Q Consensus 408 ~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~-~l~~~ 442 (468)
.+.+++.+||+.||++|||++++++ .|...
T Consensus 267 -----~~~~li~~~l~~dp~~Rps~~ell~~~~~~~ 297 (335)
T 2owb_A 267 -----VAASLIQKMLQTDPTARPTINELLNDEFFTS 297 (335)
T ss_dssp -----HHHHHHHHHTCSSGGGSCCGGGGGGSHHHHT
T ss_pred -----HHHHHHHHHccCChhHCcCHHHHhcCccccC
Confidence 2667899999999999999999995 34443
No 115
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.9e-43 Score=343.45 Aligned_cols=252 Identities=23% Similarity=0.379 Sum_probs=196.1
Q ss_pred hCccccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccC--CceeeEEEEEeeCCEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRH--RNIVKLYGFCLHRKCMFLI 247 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~l~~~~~~~~~~~lv 247 (468)
++|.+.+.||+|+||.||++...+++.||||++....... ...+.+.+|++++.+++| +||+++++++......++|
T Consensus 9 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 87 (343)
T 3dbq_A 9 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADN-QTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 87 (343)
T ss_dssp CEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCH-HHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred CEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccch-HHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence 5689999999999999999998889999999997654332 345788999999999986 9999999999999999999
Q ss_pred EEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccC
Q 012219 248 YEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNF 327 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~ 327 (468)
|| +.+|+|.+++.... .+++.++..++.||+.||.||| +.+|+||||||+|||++ ++.+||+|||+++....
T Consensus 88 ~e-~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~al~~lH---~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~ 159 (343)
T 3dbq_A 88 ME-CGNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQP 159 (343)
T ss_dssp EC-CCSEEHHHHHHHSC---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC--
T ss_pred Ee-CCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcceEEEE-CCcEEEeecccccccCc
Confidence 99 56789999998643 3899999999999999999999 77999999999999997 57899999999987643
Q ss_pred CCC--CceeccccccccccccccC-----------CCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccc
Q 012219 328 DSS--NRTLLAGTYGYIAPELAYT-----------MVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDL 394 (468)
Q Consensus 328 ~~~--~~~~~~g~~~y~aPE~~~~-----------~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 394 (468)
... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.......... ...
T Consensus 160 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~------~~~ 233 (343)
T 3dbq_A 160 DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL------HAI 233 (343)
T ss_dssp ----------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHH------HHH
T ss_pred ccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHH------HHH
Confidence 322 2234579999999999864 678899999999999999999999997543221111 111
Q ss_pred cCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Q 012219 395 LDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEF 439 (468)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l 439 (468)
+++............ .+.+++.+||+.||++|||+.+++++-
T Consensus 234 ~~~~~~~~~~~~~~~---~l~~li~~~L~~dp~~Rpt~~e~l~hp 275 (343)
T 3dbq_A 234 IDPNHEIEFPDIPEK---DLQDVLKCCLKRDPKQRISIPELLAHP 275 (343)
T ss_dssp HCTTSCCCCCCCSCH---HHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred hcCCcccCCcccCCH---HHHHHHHHHcCCChhHCCCHHHHHhCc
Confidence 111111111111111 266799999999999999999998543
No 116
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=2e-43 Score=348.89 Aligned_cols=252 Identities=23% Similarity=0.369 Sum_probs=197.0
Q ss_pred hCccccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhcc--CCceeeEEEEEeeCCEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIR--HRNIVKLYGFCLHRKCMFLI 247 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~~~~~lv 247 (468)
++|.+.+.||+|+||.||+|...+++.||||++...... ....+.+.+|++++.+++ ||||+++++++...+..++|
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 134 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEAD-NQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 134 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCC-HHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEeccccc-HHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEE
Confidence 459999999999999999999888999999999765432 234578899999999996 59999999999999999999
Q ss_pred EEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccC
Q 012219 248 YEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNF 327 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~ 327 (468)
|| +.+++|.+++.... .+++.++..++.||+.||.||| +.+|+||||||+|||++ ++.+||+|||+++.+..
T Consensus 135 ~E-~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~ 206 (390)
T 2zmd_A 135 ME-CGNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQP 206 (390)
T ss_dssp EE-CCSEEHHHHHHHCS---SCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC--
T ss_pred Ee-cCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHEEEE-CCeEEEEecCccccccC
Confidence 99 56889999998654 4889999999999999999999 78999999999999996 58999999999987643
Q ss_pred CCC--CceeccccccccccccccC-----------CCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccc
Q 012219 328 DSS--NRTLLAGTYGYIAPELAYT-----------MVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDL 394 (468)
Q Consensus 328 ~~~--~~~~~~g~~~y~aPE~~~~-----------~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 394 (468)
... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||......... ...+
T Consensus 207 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~------~~~~ 280 (390)
T 2zmd_A 207 DTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK------LHAI 280 (390)
T ss_dssp -------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHH------HHHH
T ss_pred CCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHH------HHHH
Confidence 222 2234579999999999865 36889999999999999999999999754321111 1111
Q ss_pred cCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Q 012219 395 LDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEF 439 (468)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l 439 (468)
+++............ .+.+++.+||+.||++|||+.+++++-
T Consensus 281 ~~~~~~~~~~~~~~~---~~~~li~~~L~~dP~~Rps~~ell~hp 322 (390)
T 2zmd_A 281 IDPNHEIEFPDIPEK---DLQDVLKCCLKRDPKQRISIPELLAHP 322 (390)
T ss_dssp HCTTSCCCCCCCSCH---HHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred hCccccCCCCccchH---HHHHHHHHHcccChhhCCCHHHHhhCc
Confidence 222111111111111 266799999999999999999999543
No 117
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=2.6e-43 Score=334.19 Aligned_cols=261 Identities=25% Similarity=0.425 Sum_probs=194.9
Q ss_pred hhCccccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
.++|.+.+.||+|+||.||+|+..+ .||+|+++...... ...+.|.+|++++++++||||+++++++. ....++||
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~ 98 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTP-QQLQAFKNEVGVLRKTRHVNILLFMGYST-APQLAIVT 98 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESSS--EEEEEEESCSSCCH-HHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEE
T ss_pred ccceeeeeEecCCCCeEEEEEEEcC--ceEEEEEeccCCCH-HHHHHHHHHHHHHHhCCCCcEEEEEeecc-CCccEEEE
Confidence 3679999999999999999998743 59999997654332 34578999999999999999999999764 45578999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||+++++|.+++.... ..+++..++.++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 99 e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 173 (289)
T 3og7_A 99 QWCEGSSLYHHLHASE--TKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRW 173 (289)
T ss_dssp ECCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEEEECCCC--------
T ss_pred EecCCCcHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHH---hCCcccccCccceEEECCCCCEEEccceeccccccc
Confidence 9999999999996543 34899999999999999999999 779999999999999999999999999999765421
Q ss_pred --CCCceecccccccccccccc---CCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCcc
Q 012219 329 --SSNRTLLAGTYGYIAPELAY---TMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPV 403 (468)
Q Consensus 329 --~~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (468)
........||+.|+|||++. ...++.++||||||+++|||++|+.||.............. .....+......
T Consensus 174 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 251 (289)
T 3og7_A 174 SGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVG--RGSLSPDLSKVR 251 (289)
T ss_dssp ----------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHH--HTSCCCCTTSSC
T ss_pred cccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhc--ccccCcchhhcc
Confidence 12223456899999999986 56788899999999999999999999976543222111100 001111111100
Q ss_pred chhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCC
Q 012219 404 DQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNK 444 (468)
Q Consensus 404 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~ 444 (468)
.. ....+.+++.+||+.||++|||+.++++.|++..+
T Consensus 252 ~~----~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 252 SN----CPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp TT----SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred cc----CCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 01 11227789999999999999999999999988654
No 118
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.6e-44 Score=349.11 Aligned_cols=266 Identities=23% Similarity=0.356 Sum_probs=199.0
Q ss_pred CccccceeeeeCCceEEEEEcC--CC--CEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEee-CCEEE
Q 012219 171 DFHIKYCIGTGGYGSVYRARLP--SG--KVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLH-RKCMF 245 (468)
Q Consensus 171 ~~~~~~~lg~G~~g~Vy~~~~~--~~--~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~~ 245 (468)
.|.+.+.||+|+||.||+|... ++ ..||||.+...... ...+.|.+|+.++++++||||++++++|.. .+..+
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~ 167 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDI--GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 167 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCS--HHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCH--HHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeE
Confidence 4677789999999999999753 22 46899998754322 345789999999999999999999999765 45789
Q ss_pred EEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccc
Q 012219 246 LIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLL 325 (468)
Q Consensus 246 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~ 325 (468)
+||||+++|+|.+++..... .+++..++.++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 168 lv~e~~~~g~L~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~ 242 (373)
T 3c1x_A 168 VVLPYMKHGDLRNFIRNETH--NPTVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDM 242 (373)
T ss_dssp EEEECCTTCBHHHHHHCTTC--CCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC------
T ss_pred EEEECCCCCCHHHHHhhccc--CCCHHHHHHHHHHHHHHHHHHH---HCCEecCccchheEEECCCCCEEEeeccccccc
Confidence 99999999999999975432 3788999999999999999999 779999999999999999999999999999866
Q ss_pred cCCCC----CceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCCCCC
Q 012219 326 NFDSS----NRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDPRLS 400 (468)
Q Consensus 326 ~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (468)
..... ......+++.|+|||++.+..++.++|||||||++|||+| |.+||............ .........
T Consensus 243 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~----~~~~~~~~p 318 (373)
T 3c1x_A 243 YDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL----LQGRRLLQP 318 (373)
T ss_dssp ---------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHH----HTTCCCCCC
T ss_pred cccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHH----HcCCCCCCC
Confidence 43221 1223456788999999999999999999999999999999 77787654332211110 000011111
Q ss_pred CccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCCCCCCCCcccc
Q 012219 401 PPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNKAPMQKPFHEI 454 (468)
Q Consensus 401 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~~~~~~~~~~~ 454 (468)
...+ . .+.+++.+||+.||++|||+.++++.|.++........+.++
T Consensus 319 ~~~~----~---~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~~~~~~~ 365 (373)
T 3c1x_A 319 EYCP----D---PLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHYVHV 365 (373)
T ss_dssp TTCC----H---HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCSCCBCCC
T ss_pred CCCC----H---HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhccccceeec
Confidence 1111 1 267799999999999999999999999988766665555544
No 119
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=3e-43 Score=345.42 Aligned_cols=248 Identities=22% Similarity=0.278 Sum_probs=193.6
Q ss_pred cccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEEec
Q 012219 173 HIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYEYM 251 (468)
Q Consensus 173 ~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 251 (468)
...+.||+|+||.||+|.. .+|+.||+|++...... ..+.+.+|++++++++||||+++++++...+..++||||+
T Consensus 92 ~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~ 168 (373)
T 2x4f_A 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMK---DKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYV 168 (373)
T ss_dssp EEEEECC-----CEEEEEETTTCCEEEEEEEECCSHH---HHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred ecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccc---cHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCC
Confidence 3356899999999999975 57899999999876543 3467889999999999999999999999999999999999
Q ss_pred cCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee--CCCCCeEEeeccccccccCCC
Q 012219 252 EMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLL--NSELEAFVADFGVARLLNFDS 329 (468)
Q Consensus 252 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll--~~~~~~kl~Dfg~~~~~~~~~ 329 (468)
++|+|.+++.... ..+++..++.++.||+.||.||| +.+|+||||||+|||+ +.++.+||+|||+++.....
T Consensus 169 ~~~~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~- 242 (373)
T 2x4f_A 169 DGGELFDRIIDES--YNLTELDTILFMKQICEGIRHMH---QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPR- 242 (373)
T ss_dssp TTCEEHHHHHHTG--GGCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTT-
T ss_pred CCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCc-
Confidence 9999999887543 23899999999999999999999 7799999999999999 66789999999999876533
Q ss_pred CCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHHH
Q 012219 330 SNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQ 409 (468)
Q Consensus 330 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (468)
.......||+.|+|||++....++.++|||||||++|||++|+.||........... .... .............
T Consensus 243 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~-i~~~----~~~~~~~~~~~~~- 316 (373)
T 2x4f_A 243 EKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNN-ILAC----RWDLEDEEFQDIS- 316 (373)
T ss_dssp CBCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHH-HHHT----CCCSCSGGGTTSC-
T ss_pred cccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH-HHhc----cCCCChhhhccCC-
Confidence 223345699999999999989999999999999999999999999975432211100 0000 0001111001111
Q ss_pred HHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 012219 410 DIILVSTVAFSCLRSQPKSRPTMQLVSN 437 (468)
Q Consensus 410 ~~~~l~~l~~~cl~~dP~~RPs~~~v~~ 437 (468)
..+.+++.+||+.||++|||+.++++
T Consensus 317 --~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 317 --EEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp --HHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred --HHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 22678999999999999999999986
No 120
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.4e-43 Score=343.11 Aligned_cols=263 Identities=25% Similarity=0.327 Sum_probs=200.3
Q ss_pred HHHHhhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchh--hhhhHHHHHHHHHHHhhccCCceeeEEEEEeeC
Q 012219 165 MIEATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETE--ELASLESFGNEARLLSQIRHRNIVKLYGFCLHR 241 (468)
Q Consensus 165 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 241 (468)
+....++|.+.+.||+|+||.||+|.. .+++.||+|++...... .....+.+.+|++++++++||||+++++++.+.
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 100 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE 100 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence 445567899999999999999999975 57889999999754321 123457889999999999999999999999999
Q ss_pred CEEEEEEEeccCCChhhhhhcCcc-------------------------------------cCCCCHHHHHHHHHHHHHH
Q 012219 242 KCMFLIYEYMEMGSLFCVLRTDEE-------------------------------------AVGLDWAKRVNVVKGMCHA 284 (468)
Q Consensus 242 ~~~~lv~e~~~~gsL~~~l~~~~~-------------------------------------~~~l~~~~~~~i~~~ia~~ 284 (468)
+..++||||+++|+|.+++..... ...+++..++.++.||+.|
T Consensus 101 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~ 180 (345)
T 3hko_A 101 QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSA 180 (345)
T ss_dssp SEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHH
Confidence 999999999999999999852100 1123567788999999999
Q ss_pred HHHHHhcCCCCeEecCCCCCceeeCCCC--CeEEeeccccccccCCCC----CceeccccccccccccccC--CCCCccc
Q 012219 285 LSYLHHDCTPPIVHRDISSNNVLLNSEL--EAFVADFGVARLLNFDSS----NRTLLAGTYGYIAPELAYT--MVVTEKC 356 (468)
Q Consensus 285 l~~LH~~~~~~ivH~dlk~~NIll~~~~--~~kl~Dfg~~~~~~~~~~----~~~~~~g~~~y~aPE~~~~--~~~~~~~ 356 (468)
|+||| +.+|+||||||+||+++.++ .+||+|||+++.+..... ......||+.|+|||++.+ ..++.++
T Consensus 181 l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 257 (345)
T 3hko_A 181 LHYLH---NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKC 257 (345)
T ss_dssp HHHHH---HTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHH
T ss_pred HHHHH---HCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHH
Confidence 99999 77999999999999998776 899999999986543211 2344579999999999865 6789999
Q ss_pred hhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHH
Q 012219 357 DVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVS 436 (468)
Q Consensus 357 Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~ 436 (468)
|||||||++|||++|+.||................ .....+...... ..+.+++.+||+.||++|||+.+++
T Consensus 258 DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~---~~~~~li~~~l~~~p~~Rps~~~~l 329 (345)
T 3hko_A 258 DAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKK-----LCFENPNYNVLS---PLARDLLSNLLNRNVDERFDAMRAL 329 (345)
T ss_dssp HHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC-----CCTTSGGGGGSC---HHHHHHHHHHSCSCTTTSCCHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcc-----cccCCcccccCC---HHHHHHHHHHcCCChhHCCCHHHHh
Confidence 99999999999999999997544321111100000 001111111111 1267899999999999999999998
Q ss_pred HH
Q 012219 437 NE 438 (468)
Q Consensus 437 ~~ 438 (468)
++
T Consensus 330 ~h 331 (345)
T 3hko_A 330 QH 331 (345)
T ss_dssp HS
T ss_pred cC
Confidence 54
No 121
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=6.4e-45 Score=347.44 Aligned_cols=263 Identities=23% Similarity=0.363 Sum_probs=187.6
Q ss_pred hCccccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhh--ccCCceeeEEEEEeeCC----E
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQ--IRHRNIVKLYGFCLHRK----C 243 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~~~----~ 243 (468)
++|.+.+.||+|+||.||+|+.. ++.||||++.... ...+.+|.+++.. ++||||+++++++.... .
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~------~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 75 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSRE------ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQ 75 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-TT------HHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEE
T ss_pred ceeeehhhccCCCCeEEEEEEEc-CcceEEEEecccc------hhhHHHHHHHHHHHhccCcceeeeeeecccCCCccce
Confidence 57999999999999999999874 8899999987543 2456778888887 79999999999998766 7
Q ss_pred EEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcC-----CCCeEecCCCCCceeeCCCCCeEEee
Q 012219 244 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDC-----TPPIVHRDISSNNVLLNSELEAFVAD 318 (468)
Q Consensus 244 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~-----~~~ivH~dlk~~NIll~~~~~~kl~D 318 (468)
.++||||+++|+|.+++... .+++..++.++.|++.||+|||... +.+|+||||||+||+++.++.+||+|
T Consensus 76 ~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~D 151 (303)
T 3gxj_A 76 LWLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD 151 (303)
T ss_dssp EEEEEECCTTCCHHHHHHHC----CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BCC
T ss_pred eEEEEeccCCCCHHHHHhcc----CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEee
Confidence 89999999999999999653 3778889999999999999999321 56999999999999999999999999
Q ss_pred ccccccccCCCCC----ceeccccccccccccccCC------CCCccchhhHHHHHHHHHHhC----------CCCCCcc
Q 012219 319 FGVARLLNFDSSN----RTLLAGTYGYIAPELAYTM------VVTEKCDVYSFGVVALEVLMG----------KHPGELL 378 (468)
Q Consensus 319 fg~~~~~~~~~~~----~~~~~g~~~y~aPE~~~~~------~~~~~~Dv~s~Gvil~el~tg----------~~p~~~~ 378 (468)
||+++........ .....||+.|+|||++.+. .++.++|||||||++|||+|| +.||...
T Consensus 152 Fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~ 231 (303)
T 3gxj_A 152 LGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDL 231 (303)
T ss_dssp CCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTT
T ss_pred cCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeecccccc
Confidence 9999776433222 1234699999999998766 455789999999999999999 5555432
Q ss_pred cccchhhhcccccccccCCCCCCccchh--HHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCCC
Q 012219 379 SSSSWSLDKNIKLIDLLDPRLSPPVDQK--IRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNKA 445 (468)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~~ 445 (468)
......... ...........+..... .......+.+++.+||+.||++|||++++++.|+.+...
T Consensus 232 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~ 298 (303)
T 3gxj_A 232 VPSDPSVEE--MRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp CC-CCCCC---CHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC
T ss_pred CCCCccHHH--HHHHHHHhhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhh
Confidence 211111000 00011111122211111 113344588999999999999999999999999987653
No 122
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=4.6e-44 Score=344.72 Aligned_cols=265 Identities=22% Similarity=0.293 Sum_probs=210.1
Q ss_pred HHHHHhhCccccceeeeeCCceEEEEEcC------CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEE
Q 012219 164 DMIEATEDFHIKYCIGTGGYGSVYRARLP------SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGF 237 (468)
Q Consensus 164 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~ 237 (468)
++....++|.+.+.||+|+||.||+|... +++.||+|.+...... .....|.+|+++++.++||||++++++
T Consensus 19 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~ 96 (322)
T 1p4o_A 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASM--RERIEFLNEASVMKEFNCHHVVRLLGV 96 (322)
T ss_dssp TTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCH--HHHHHHHHHHHHGGGCCCTTBCCEEEE
T ss_pred hhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCH--HHHHHHHHHHHHHHhcCCCCEeeeEEE
Confidence 34445678999999999999999999653 4788999999765433 234678899999999999999999999
Q ss_pred EeeCCEEEEEEEeccCCChhhhhhcCcc-------cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCC
Q 012219 238 CLHRKCMFLIYEYMEMGSLFCVLRTDEE-------AVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNS 310 (468)
Q Consensus 238 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~-------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~ 310 (468)
+.+.+..++||||+++|+|.+++..... ...+++..++.++.|++.||.||| +.+|+||||||+||+++.
T Consensus 97 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~NIli~~ 173 (322)
T 1p4o_A 97 VSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAE 173 (322)
T ss_dssp ECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCSGGGEEECT
T ss_pred EccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCCccCCCccceEEEcC
Confidence 9999999999999999999999875321 234789999999999999999999 779999999999999999
Q ss_pred CCCeEEeeccccccccCCCCC--ceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhc
Q 012219 311 ELEAFVADFGVARLLNFDSSN--RTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDK 387 (468)
Q Consensus 311 ~~~~kl~Dfg~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~ 387 (468)
++.+||+|||+++........ .....+++.|+|||++.+..++.++||||||+++|||+| |+.||............
T Consensus 174 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~ 253 (322)
T 1p4o_A 174 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 253 (322)
T ss_dssp TCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHH
T ss_pred CCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHHH
Confidence 999999999999865432211 122356788999999998899999999999999999999 89998754332111100
Q ss_pred ccccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCC
Q 012219 388 NIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNK 444 (468)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~ 444 (468)
.. ... +......+ ..+.+++.+||+.||++|||+.++++.|++...
T Consensus 254 ~~--~~~--~~~~~~~~-------~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~ 299 (322)
T 1p4o_A 254 ME--GGL--LDKPDNCP-------DMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299 (322)
T ss_dssp HT--TCC--CCCCTTCC-------HHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred Hc--CCc--CCCCCCCC-------HHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence 00 000 11111111 126679999999999999999999999988754
No 123
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=1.2e-43 Score=338.72 Aligned_cols=263 Identities=24% Similarity=0.344 Sum_probs=202.0
Q ss_pred hCccccceeeeeCCceEEEEEc-----CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeC--C
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-----PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHR--K 242 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~ 242 (468)
++|++.+.||+|+||.||+|++ .+++.||+|++...... ...+.+.+|++++++++||||+++++++... .
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 98 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGG--NHIADLKKEIEILRNLYHENIVKYKGICTEDGGN 98 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---C
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccc--hhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCc
Confidence 4688899999999999999983 46899999999865432 3457788999999999999999999999876 6
Q ss_pred EEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccc
Q 012219 243 CMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVA 322 (468)
Q Consensus 243 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~ 322 (468)
..++||||+++|+|.+++.... ..+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++
T Consensus 99 ~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~ 173 (302)
T 4e5w_A 99 GIKLIMEFLPSGSLKEYLPKNK--NKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLT 173 (302)
T ss_dssp CEEEEEECCTTCBHHHHHHHHT--TTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTC
T ss_pred eEEEEEEeCCCCcHHHHHHhcc--ccCCHHHHHHHHHHHHHHHHHhh---cCCcccCCCchheEEEcCCCCEEECccccc
Confidence 6899999999999999996543 23899999999999999999999 779999999999999999999999999999
Q ss_pred ccccCCCC---CceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchh-------hhcccccc
Q 012219 323 RLLNFDSS---NRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWS-------LDKNIKLI 392 (468)
Q Consensus 323 ~~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~-------~~~~~~~~ 392 (468)
+....... ......+|..|+|||++.+..++.++||||||+++|||+||+.|+......... ........
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (302)
T 4e5w_A 174 KAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLV 253 (302)
T ss_dssp EECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHH
T ss_pred ccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHH
Confidence 87654332 223346788899999999999999999999999999999999986432110000 00000001
Q ss_pred cccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhc
Q 012219 393 DLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIAR 442 (468)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~ 442 (468)
..+............. ..+.+++.+||+.||++|||+.++++.|++.
T Consensus 254 ~~~~~~~~~~~~~~~~---~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 300 (302)
T 4e5w_A 254 NTLKEGKRLPCPPNCP---DEVYQLMRKCWEFQPSNRTSFQNLIEGFEAL 300 (302)
T ss_dssp HHHHTTCCCCCCTTCC---HHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHhccCCCCCCCCCC---HHHHHHHHHHcCCCCCCCCCHHHHHHHHHHH
Confidence 1111111111111111 1267899999999999999999999999865
No 124
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=2e-43 Score=334.83 Aligned_cols=253 Identities=21% Similarity=0.391 Sum_probs=200.2
Q ss_pred hCccccceeeeeCCceEEEEEcCC-C-------CEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeC
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLPS-G-------KVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHR 241 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~~-~-------~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 241 (468)
++|.+.+.||+|+||.||+|.... + ..||+|++..... ...+.|.+|++++++++||||+++++++...
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 84 (289)
T 4fvq_A 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHR---NYSESFFEAASMMSKLSHKHLVLNYGVCVCG 84 (289)
T ss_dssp GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGG---GGHHHHHHHHHHHHTSCCTTBCCEEEEECCT
T ss_pred hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccH---HHHHHHHHHHHHHHhCCCCCEeEEEEEEEeC
Confidence 578999999999999999997542 3 5799999975443 2356789999999999999999999999999
Q ss_pred CEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCC--------
Q 012219 242 KCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELE-------- 313 (468)
Q Consensus 242 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~-------- 313 (468)
+..++||||+++|+|.+++..... .+++..++.++.||+.||.||| +.+|+||||||+||+++.++.
T Consensus 85 ~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~ 159 (289)
T 4fvq_A 85 DENILVQEFVKFGSLDTYLKKNKN--CINILWKLEVAKQLAAAMHFLE---ENTLIHGNVCAKNILLIREEDRKTGNPPF 159 (289)
T ss_dssp TCCEEEEECCTTCBHHHHHHHTGG--GCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEEECCBGGGTBCCE
T ss_pred CCCEEEEECCCCCCHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHh---hCCeECCCcCcceEEEecCCcccccccce
Confidence 999999999999999999986543 3889999999999999999999 779999999999999998887
Q ss_pred eEEeeccccccccCCCCCceeccccccccccccccC-CCCCccchhhHHHHHHHHHHhCC-CCCCcccccchhhhccccc
Q 012219 314 AFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGK-HPGELLSSSSWSLDKNIKL 391 (468)
Q Consensus 314 ~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg~-~p~~~~~~~~~~~~~~~~~ 391 (468)
+||+|||++.... ......+++.|+|||++.+ ..++.++||||||+++|||++|. .|+........... ...
T Consensus 160 ~kl~Dfg~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~-~~~- 233 (289)
T 4fvq_A 160 IKLSDPGISITVL----PKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQF-YED- 233 (289)
T ss_dssp EEECCCCSCTTTS----CHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHH-HHT-
T ss_pred eeeccCccccccc----CccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHH-hhc-
Confidence 9999999986542 2233468899999999987 67899999999999999999955 45543322111110 000
Q ss_pred ccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCCCCC
Q 012219 392 IDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNKAPM 447 (468)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~~~~ 447 (468)
........... +.+++.+||+.||++|||++++++.|.+...+..
T Consensus 234 ----~~~~~~~~~~~-------l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~~ 278 (289)
T 4fvq_A 234 ----RHQLPAPKAAE-------LANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDL 278 (289)
T ss_dssp ----TCCCCCCSSCT-------THHHHHHHSCSSGGGSCCHHHHHHHHHTCC----
T ss_pred ----cCCCCCCCCHH-------HHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCC
Confidence 11111111111 5678999999999999999999999998865433
No 125
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=8.5e-44 Score=346.22 Aligned_cols=273 Identities=18% Similarity=0.216 Sum_probs=203.0
Q ss_pred hCccccceeeeeCCceEEEEEcC----CCCEEEEEEecCcchhhhh--------hHHHHHHHHHHHhhccCCceeeEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLP----SGKVVALKKLHRSETEELA--------SLESFGNEARLLSQIRHRNIVKLYGF 237 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~--------~~~~~~~e~~~l~~l~h~niv~l~~~ 237 (468)
++|.+.+.||+|+||.||+|... ++..+|+|++......... ....+.+|+..+..++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 57999999999999999999864 5788999999765432111 12346788899999999999999999
Q ss_pred Eee----CCEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCC-
Q 012219 238 CLH----RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSEL- 312 (468)
Q Consensus 238 ~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~- 312 (468)
+.. ....++||||+ +++|.+++.... .+++.+++.++.||+.||+||| +.+|+||||||+||+++.++
T Consensus 117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~ 189 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERL-GIDLQKISGQNG---TFKKSTVLQLGIRMLDVLEYIH---ENEYVHGDIKAANLLLGYKNP 189 (345)
T ss_dssp EEEESSSCEEEEEEEECE-EEEHHHHCBGGG---BCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEESSST
T ss_pred cccccCCCcEEEEEEecc-CCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCcCHHHEEEccCCC
Confidence 988 77899999999 999999997654 4899999999999999999999 77999999999999999887
Q ss_pred -CeEEeeccccccccCCC-------CCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchh
Q 012219 313 -EAFVADFGVARLLNFDS-------SNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWS 384 (468)
Q Consensus 313 -~~kl~Dfg~~~~~~~~~-------~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~ 384 (468)
.+||+|||+++.+.... .......||+.|+|||++.+..++.++|||||||++|||+||+.||.........
T Consensus 190 ~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~ 269 (345)
T 2v62_A 190 DQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVA 269 (345)
T ss_dssp TSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHH
T ss_pred CcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHH
Confidence 99999999998764221 1123457899999999999999999999999999999999999999643221111
Q ss_pred hh-cccccccccCCCCCCccchhHH--HHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCCCCCCCCccc
Q 012219 385 LD-KNIKLIDLLDPRLSPPVDQKIR--QDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNKAPMQKPFHE 453 (468)
Q Consensus 385 ~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~~~~~~~~~~ 453 (468)
.. ....... ........... .....+.+++.+||+.||++|||+++|++.|+.......+..+..
T Consensus 270 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~~d~~~ 337 (345)
T 2v62_A 270 VQTAKTNLLD----ELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGIPLGPLDFST 337 (345)
T ss_dssp HHHHHHHHHH----TTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCCCCCCCCCCC
T ss_pred HHHHHHhhcc----cccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCCcccCCCccc
Confidence 10 0000000 00000000000 011137789999999999999999999999998776555554443
No 126
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=4.6e-43 Score=357.23 Aligned_cols=257 Identities=21% Similarity=0.305 Sum_probs=207.4
Q ss_pred hCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
++|.+.+.||+|+||.||+|+. .+|+.||+|++...........+.+.+|++++++++||||+++++++......++||
T Consensus 185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm 264 (543)
T 3c4z_A 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVM 264 (543)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEE
Confidence 6788889999999999999976 469999999998665544445678899999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcc-cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccC
Q 012219 249 EYMEMGSLFCVLRTDEE-AVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNF 327 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~ 327 (468)
||+++|+|.+++..... ...+++..++.++.||+.||.||| +.+|+||||||+|||++.++.+||+|||+++.+..
T Consensus 265 E~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH---~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~ 341 (543)
T 3c4z_A 265 TIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKA 341 (543)
T ss_dssp CCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHH---HcCCcccCCChHHEEEeCCCCEEEeecceeeeccC
Confidence 99999999999876432 345899999999999999999999 77999999999999999999999999999987754
Q ss_pred CCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhH
Q 012219 328 DSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKI 407 (468)
Q Consensus 328 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (468)
.........||+.|+|||++.+..++.++|||||||++|||+||+.||...............+.. ....+....+.
T Consensus 342 ~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~-~~~~~p~~~s~-- 418 (543)
T 3c4z_A 342 GQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLE-QAVTYPDKFSP-- 418 (543)
T ss_dssp TCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHH-CCCCCCTTSCH--
T ss_pred CCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhh-cccCCCcccCH--
Confidence 444444568999999999999999999999999999999999999999754321110000000000 01111222221
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCH-----HHHHH
Q 012219 408 RQDIILVSTVAFSCLRSQPKSRPTM-----QLVSN 437 (468)
Q Consensus 408 ~~~~~~l~~l~~~cl~~dP~~RPs~-----~~v~~ 437 (468)
.+.+++.+||+.||++||++ +++++
T Consensus 419 -----~~~~li~~lL~~dP~~R~~~~~~~a~ei~~ 448 (543)
T 3c4z_A 419 -----ASKDFCEALLQKDPEKRLGFRDGSCDGLRT 448 (543)
T ss_dssp -----HHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred -----HHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence 26678999999999999975 66764
No 127
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=2e-43 Score=349.95 Aligned_cols=269 Identities=22% Similarity=0.295 Sum_probs=208.7
Q ss_pred hCccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCC--EEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRK--CMFL 246 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~~~l 246 (468)
++|.+.+.||+|+||.||+|+.. +++.||||++...... ...+.+.+|++++++++||||+++++++.... ..++
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~l 86 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFL--RPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVL 86 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGG--SCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEecccccc--chHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEE
Confidence 57899999999999999999764 5899999999764432 23567889999999999999999999998755 6899
Q ss_pred EEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee----CCCCCeEEeecccc
Q 012219 247 IYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLL----NSELEAFVADFGVA 322 (468)
Q Consensus 247 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll----~~~~~~kl~Dfg~~ 322 (468)
||||+++|+|.+++........+++..++.++.||+.||+||| +.+|+||||||+||++ +.++.+||+|||++
T Consensus 87 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a 163 (396)
T 4eut_A 87 IMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA 163 (396)
T ss_dssp EECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEECTTSCEEEEECCGGGC
T ss_pred EEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH---HCCEEECCcCHHHEEEeecCCCceeEEEecCCCc
Confidence 9999999999999987655555999999999999999999999 7799999999999999 77888999999999
Q ss_pred ccccCCCCCceeccccccccccccccC--------CCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccc--
Q 012219 323 RLLNFDSSNRTLLAGTYGYIAPELAYT--------MVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLI-- 392 (468)
Q Consensus 323 ~~~~~~~~~~~~~~g~~~y~aPE~~~~--------~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~-- 392 (468)
+...... ......||+.|+|||++.. ..++.++|||||||++|||+||+.||.................
T Consensus 164 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~ 242 (396)
T 4eut_A 164 RELEDDE-QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITG 242 (396)
T ss_dssp EECCCGG-GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHS
T ss_pred eEccCCC-ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcC
Confidence 8764322 2234569999999998865 5678899999999999999999999864332111000000000
Q ss_pred ----------cc------cCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCCC
Q 012219 393 ----------DL------LDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNKA 445 (468)
Q Consensus 393 ----------~~------~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~~ 445 (468)
.. ....+.... .........+.+++.+||+.||++||+++++++.+..+...
T Consensus 243 ~p~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~ 310 (396)
T 4eut_A 243 KPSGAISGVQKAENGPIDWSGDMPVSC-SLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (396)
T ss_dssp CCTTCCEEEECSTTCCEEEESSCCTTC-SSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred CCcccchhheeccCCCcccCccCCccc-ccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence 00 000111100 11122333477899999999999999999999998876543
No 128
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=3.8e-43 Score=358.67 Aligned_cols=257 Identities=23% Similarity=0.308 Sum_probs=207.7
Q ss_pred hhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLI 247 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 247 (468)
.++|.+.+.||+|+||.||+|+. .+|+.||+|++.............+.+|+++++.++||||+++++++.+.+..++|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 46799999999999999999976 47999999999765544444556788999999999999999999999999999999
Q ss_pred EEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccC
Q 012219 248 YEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNF 327 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~ 327 (468)
|||+++|+|.+++.... ...+++..+..++.||+.||.||| +.+|+||||||+|||++.++.+||+|||+++....
T Consensus 263 mEy~~gg~L~~~l~~~~-~~~l~e~~~~~i~~qIl~aL~yLH---~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~ 338 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMG-QAGFPEARAVFYAAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPE 338 (576)
T ss_dssp ECCCCSCBHHHHHHSSS-SCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EEcCCCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCchheEEEeCCCCeEEEecccceeccc
Confidence 99999999999997643 234899999999999999999999 77999999999999999999999999999987653
Q ss_pred CCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhH
Q 012219 328 DSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKI 407 (468)
Q Consensus 328 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (468)
. .......||+.|+|||++.+..++.++|||||||++|||++|+.||........... ...........+....+.
T Consensus 339 ~-~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~-i~~~i~~~~~~~p~~~s~-- 414 (576)
T 2acx_A 339 G-QTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREE-VERLVKEVPEEYSERFSP-- 414 (576)
T ss_dssp T-CCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHH-HHHHHHHCCCCCCTTSCH--
T ss_pred C-ccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHH-HHHHhhcccccCCccCCH--
Confidence 2 233445899999999999999999999999999999999999999975432111000 000000111122222221
Q ss_pred HHHHHHHHHHHHhcccCCCCCCC-----CHHHHHHH
Q 012219 408 RQDIILVSTVAFSCLRSQPKSRP-----TMQLVSNE 438 (468)
Q Consensus 408 ~~~~~~l~~l~~~cl~~dP~~RP-----s~~~v~~~ 438 (468)
.+.+++.+||+.||++|| +++|++++
T Consensus 415 -----~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 415 -----QARSLCSQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp -----HHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred -----HHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence 266799999999999999 78888853
No 129
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=7.5e-44 Score=337.63 Aligned_cols=256 Identities=26% Similarity=0.380 Sum_probs=208.4
Q ss_pred HhhCccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEE
Q 012219 168 ATEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFL 246 (468)
Q Consensus 168 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 246 (468)
..++|.+.+.||+|+||.||+|... ++..||+|++...... .+.+.+|++++++++||||+++++++.+.+..++
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 86 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 86 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTH----HHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHHH----HHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEE
Confidence 3578999999999999999999764 5889999999765432 4678899999999999999999999999999999
Q ss_pred EEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccccccc
Q 012219 247 IYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLN 326 (468)
Q Consensus 247 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~ 326 (468)
||||+++++|.+++..... ..+++..++.++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 87 v~e~~~~~~L~~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~ 162 (288)
T 3kfa_A 87 ITEFMTYGNLLDYLRECNR-QEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT 162 (288)
T ss_dssp EEECCTTEEHHHHHHHCCT-TTSCHHHHHHHHHHHHHHHHHHH---HHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSC
T ss_pred EEEcCCCCcHHHHHHhccc-CCccHhHHHHHHHHHHHHHHHHH---HCCccCCCCCcceEEEcCCCCEEEccCccceecc
Confidence 9999999999999976432 34899999999999999999999 6799999999999999999999999999998765
Q ss_pred CCCCC-ceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCCCCCCccc
Q 012219 327 FDSSN-RTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVD 404 (468)
Q Consensus 327 ~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (468)
..... .....+++.|+|||++.+..++.++||||||+++|+|++ |+.||........... .............+
T Consensus 163 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~----~~~~~~~~~~~~~~ 238 (288)
T 3kfa_A 163 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL----LEKDYRMERPEGCP 238 (288)
T ss_dssp SSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHH----HHTTCCCCCCTTCC
T ss_pred CCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH----HhccCCCCCCCCCC
Confidence 33221 122356788999999998899999999999999999999 9999875443221111 01111111111111
Q ss_pred hhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhc
Q 012219 405 QKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIAR 442 (468)
Q Consensus 405 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~ 442 (468)
..+.+++.+||+.||++|||+.++++.|+..
T Consensus 239 -------~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~ 269 (288)
T 3kfa_A 239 -------EKVYELMRACWQWNPSDRPSFAEIHQAFETM 269 (288)
T ss_dssp -------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred -------HHHHHHHHHHhCCChhhCcCHHHHHHHHHHH
Confidence 1267799999999999999999999998765
No 130
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=3.8e-43 Score=338.25 Aligned_cols=255 Identities=22% Similarity=0.303 Sum_probs=204.0
Q ss_pred hhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhh---hhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEEL---ASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCM 244 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 244 (468)
.++|.+.+.||+|+||.||+|.. .+|+.||+|++........ ...+.+.+|++++++++||||+++++++......
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 35799999999999999999975 4689999999976543211 1356788999999999999999999999999999
Q ss_pred EEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCC----CeEEeecc
Q 012219 245 FLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSEL----EAFVADFG 320 (468)
Q Consensus 245 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~----~~kl~Dfg 320 (468)
++||||+++++|.+++.... .+++..++.++.|++.||.||| +.+|+||||||+||+++.++ .+||+|||
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~lH---~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg 164 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQKE---SLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFG 164 (321)
T ss_dssp EEEECCCCSCBHHHHHHTCS---CEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECCCT
T ss_pred EEEEEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCChHHEEEecCCCCcCCEEEccCc
Confidence 99999999999999997543 3889999999999999999999 77999999999999999988 79999999
Q ss_pred ccccccCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCC
Q 012219 321 VARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLS 400 (468)
Q Consensus 321 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (468)
+++..... .......||+.|+|||++.+..++.++||||||+++|+|++|+.||........... ... ......
T Consensus 165 ~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~----i~~-~~~~~~ 238 (321)
T 2a2a_A 165 LAHEIEDG-VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN----ITS-VSYDFD 238 (321)
T ss_dssp TCEECCTT-CCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHH----HHT-TCCCCC
T ss_pred cceecCcc-ccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHH----HHh-cccccC
Confidence 99876532 223445689999999999999999999999999999999999999975432211110 000 000111
Q ss_pred CccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 401 PPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 401 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
..... .....+.+++.+||+.||++|||+.+++++
T Consensus 239 ~~~~~---~~~~~~~~li~~~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 239 EEFFS---HTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (321)
T ss_dssp HHHHT---TCCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred hhhhc---ccCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00000 111236789999999999999999999864
No 131
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=1.2e-42 Score=344.25 Aligned_cols=251 Identities=24% Similarity=0.345 Sum_probs=187.9
Q ss_pred hCcccc-ceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhh-ccCCceeeEEEEEee----CC
Q 012219 170 EDFHIK-YCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQ-IRHRNIVKLYGFCLH----RK 242 (468)
Q Consensus 170 ~~~~~~-~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~-l~h~niv~l~~~~~~----~~ 242 (468)
++|.+. +.||+|+||+||++.. .+++.||||++... ..+.+|++++.+ .+||||+++++++.. ..
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~--------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~ 132 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------PKARREVELHWRASQCPHIVRIVDVYENLYAGRK 132 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS--------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc--------hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCc
Confidence 466665 6899999999999975 46899999999643 245578887744 589999999998875 56
Q ss_pred EEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCC---CCCeEEeec
Q 012219 243 CMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNS---ELEAFVADF 319 (468)
Q Consensus 243 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~---~~~~kl~Df 319 (468)
..++||||+++|+|.+++.... ...+++.++..++.||+.||.||| +.+|+||||||+|||++. ++.+||+||
T Consensus 133 ~~~lv~E~~~gg~L~~~l~~~~-~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~~~kl~DF 208 (400)
T 1nxk_A 133 CLLIVMECLDGGELFSRIQDRG-DQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDF 208 (400)
T ss_dssp EEEEEEECCCSEEHHHHHHCC----CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSTTCCEEECCC
T ss_pred EEEEEEEeCCCCcHHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCcceEEEecCCCCccEEEEec
Confidence 7899999999999999997643 234899999999999999999999 779999999999999998 789999999
Q ss_pred cccccccCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchh--hhcccccccccCC
Q 012219 320 GVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWS--LDKNIKLIDLLDP 397 (468)
Q Consensus 320 g~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~--~~~~~~~~~~~~~ 397 (468)
|+++.... ........||+.|+|||++.+..++.++|||||||++|||++|+.||......... ......... .
T Consensus 209 G~a~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~---~ 284 (400)
T 1nxk_A 209 GFAKETTS-HNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQ---Y 284 (400)
T ss_dssp TTCEECC------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTC---C
T ss_pred ccccccCC-CCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCc---c
Confidence 99987542 22334567899999999999999999999999999999999999999754322110 000000000 0
Q ss_pred CCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Q 012219 398 RLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEF 439 (468)
Q Consensus 398 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l 439 (468)
............ .+.+++.+||+.||++|||+.+++++-
T Consensus 285 ~~~~~~~~~~s~---~~~~li~~~L~~dP~~Rpt~~eil~hp 323 (400)
T 1nxk_A 285 EFPNPEWSEVSE---EVKMLIRNLLKTEPTQRMTITEFMNHP 323 (400)
T ss_dssp CCCTTTTTTSCH---HHHHHHHTTSCSSGGGSCCHHHHHHSH
T ss_pred cCCCcccccCCH---HHHHHHHHHCCCChhHCcCHHHHhcCc
Confidence 111110011111 266799999999999999999999653
No 132
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=1.8e-43 Score=336.30 Aligned_cols=263 Identities=16% Similarity=0.254 Sum_probs=199.2
Q ss_pred HhhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEE-eeCCEEE
Q 012219 168 ATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFC-LHRKCMF 245 (468)
Q Consensus 168 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~-~~~~~~~ 245 (468)
..++|.+.+.||+|+||.||+|.. .+++.||||++...... +.+.+|++++..++|++++..++++ ......+
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH-----PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNV 81 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---C-----CCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccc-----hHHHHHHHHHHHhcCCCCCCeeeeecCCCCceE
Confidence 357899999999999999999974 67899999987654432 3577899999999988877766655 5677889
Q ss_pred EEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee---CCCCCeEEeecccc
Q 012219 246 LIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLL---NSELEAFVADFGVA 322 (468)
Q Consensus 246 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll---~~~~~~kl~Dfg~~ 322 (468)
+||||+ +++|.+++..... .+++..++.++.||+.||.||| +.+|+||||||+||++ +.++.+||+|||++
T Consensus 82 lv~e~~-~~~L~~~~~~~~~--~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a 155 (296)
T 4hgt_A 82 MVMELL-GPSLEDLFNFCSR--KFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 155 (296)
T ss_dssp EEEECC-CCBHHHHHHHTTS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECCGGGTTCEEECCCTTC
T ss_pred EEEEcc-CCCHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeeeeccCCCCeEEEecCccc
Confidence 999999 9999999975432 3899999999999999999999 7799999999999999 78899999999999
Q ss_pred ccccCCCC-------CceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhccccccccc
Q 012219 323 RLLNFDSS-------NRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLL 395 (468)
Q Consensus 323 ~~~~~~~~-------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 395 (468)
+....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||............ ....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~----~~~~ 231 (296)
T 4hgt_A 156 KKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKY----ERIS 231 (296)
T ss_dssp EECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHH----HHHH
T ss_pred eeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhh----hhhh
Confidence 87654322 223457899999999999999999999999999999999999999764332110000 0000
Q ss_pred CCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCCC
Q 012219 396 DPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNKA 445 (468)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~~ 445 (468)
......+...........+.+++.+||+.||++|||++++++.|......
T Consensus 232 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~ 281 (296)
T 4hgt_A 232 EKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR 281 (296)
T ss_dssp HHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHH
T ss_pred cccccchhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHH
Confidence 00000000000000012377899999999999999999999998876543
No 133
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=1e-42 Score=329.20 Aligned_cols=253 Identities=27% Similarity=0.450 Sum_probs=206.2
Q ss_pred hCccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
++|.+.+.||+|+||.||+|... +++.||+|++...........+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 93 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML 93 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence 67999999999999999999764 67889999997654443344567889999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||+++|+|.+++.... .+++..++.++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++.....
T Consensus 94 e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~- 166 (284)
T 2vgo_A 94 EFAPRGELYKELQKHG---RFDEQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS- 166 (284)
T ss_dssp CCCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTCCEEECCCTTCEECSS-
T ss_pred EeCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEEcCCCCEEEecccccccCcc-
Confidence 9999999999997643 3899999999999999999999 78999999999999999999999999999876542
Q ss_pred CCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHH
Q 012219 329 SSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIR 408 (468)
Q Consensus 329 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (468)
.......|++.|+|||++.+..++.++||||||+++|||++|+.||........... .. ..+..+....+.
T Consensus 167 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~----~~-~~~~~~~~~~~~--- 237 (284)
T 2vgo_A 167 -LRRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRR----IV-NVDLKFPPFLSD--- 237 (284)
T ss_dssp -SCBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHH----HH-TTCCCCCTTSCH---
T ss_pred -cccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHH----Hh-ccccCCCCcCCH---
Confidence 223345789999999999999999999999999999999999999975432211110 00 011122222221
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCHHHHHH-HHHhc
Q 012219 409 QDIILVSTVAFSCLRSQPKSRPTMQLVSN-EFIAR 442 (468)
Q Consensus 409 ~~~~~l~~l~~~cl~~dP~~RPs~~~v~~-~l~~~ 442 (468)
.+.+++.+||+.||++|||++++++ .+.+.
T Consensus 238 ----~~~~li~~~l~~~p~~Rps~~~ll~h~~~~~ 268 (284)
T 2vgo_A 238 ----GSKDLISKLLRYHPPQRLPLKGVMEHPWVKA 268 (284)
T ss_dssp ----HHHHHHHHHSCSSGGGSCCHHHHHTCHHHHH
T ss_pred ----HHHHHHHHHhhcCHhhCCCHHHHhhCHHHHh
Confidence 2667999999999999999999995 34433
No 134
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=4.2e-43 Score=337.45 Aligned_cols=260 Identities=24% Similarity=0.354 Sum_probs=203.3
Q ss_pred ccccceeeeeCCceEEEEEc-----CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEee--CCEE
Q 012219 172 FHIKYCIGTGGYGSVYRARL-----PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLH--RKCM 244 (468)
Q Consensus 172 ~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~ 244 (468)
|.+.+.||+|+||.||++.+ .+++.||||++...... ...+.+.+|++++++++||||+++++++.+ ....
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 110 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGP--QHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASL 110 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCH--HHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccCh--HHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceE
Confidence 48899999999999998854 26889999999865432 345678999999999999999999999987 4678
Q ss_pred EEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccccc
Q 012219 245 FLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARL 324 (468)
Q Consensus 245 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~ 324 (468)
++||||+++|+|.+++.... +++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 111 ~lv~e~~~~~~L~~~l~~~~----~~~~~~~~i~~~l~~~l~~LH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~ 183 (318)
T 3lxp_A 111 QLVMEYVPLGSLRDYLPRHS----IGLAQLLLFAQQICEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKA 183 (318)
T ss_dssp EEEECCCTTCBHHHHGGGSC----CCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred EEEEecccCCcHHHHHhhCC----CCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEEcCCCCEEECCcccccc
Confidence 99999999999999997543 899999999999999999999 77999999999999999999999999999987
Q ss_pred ccCCCC---CceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhh-------hcccccccc
Q 012219 325 LNFDSS---NRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSL-------DKNIKLIDL 394 (468)
Q Consensus 325 ~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~-------~~~~~~~~~ 394 (468)
...... ......++..|+|||++.+..++.++||||||+++|||+||+.||.......... .......+.
T Consensus 184 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (318)
T 3lxp_A 184 VPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTEL 263 (318)
T ss_dssp CCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHH
T ss_pred ccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHH
Confidence 654322 1223457888999999998899999999999999999999999986432210000 000011111
Q ss_pred cCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcC
Q 012219 395 LDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARN 443 (468)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~ 443 (468)
+............. ..+.+++.+||+.||++|||++++++.|+...
T Consensus 264 ~~~~~~~~~~~~~~---~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~ 309 (318)
T 3lxp_A 264 LERGERLPRPDKCP---AEVYHLMKNCWETEASFRPTFENLIPILKTVH 309 (318)
T ss_dssp HHTTCCCCCCTTCC---HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HhcccCCCCCcccc---HHHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence 11111111111111 22778999999999999999999999998764
No 135
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=7.2e-43 Score=333.45 Aligned_cols=250 Identities=30% Similarity=0.431 Sum_probs=206.7
Q ss_pred hCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
+.|.+.+.||+|+||.||+|.. .+++.||+|++...... ...+.+.+|+.++++++||||+++++++......++||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 99 (303)
T 3a7i_A 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE--DEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIM 99 (303)
T ss_dssp GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCS--TTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccH--HHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEE
Confidence 5688999999999999999974 57899999999765433 24578899999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||+++++|.+++... .+++..++.++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 100 e~~~~~~L~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~ 172 (303)
T 3a7i_A 100 EYLGGGSALDLLEPG----PLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT 172 (303)
T ss_dssp ECCTTEEHHHHHTTS----CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTT
T ss_pred EeCCCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChheEEECCCCCEEEeecccceecCcc
Confidence 999999999998642 4899999999999999999999 779999999999999999999999999999877544
Q ss_pred CCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHH
Q 012219 329 SSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIR 408 (468)
Q Consensus 329 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (468)
........|++.|+|||++.+..++.++||||||+++|||++|+.||........... ......+.+....+.
T Consensus 173 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~----~~~~~~~~~~~~~~~--- 245 (303)
T 3a7i_A 173 QIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFL----IPKNNPPTLEGNYSK--- 245 (303)
T ss_dssp BCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH----HHHSCCCCCCSSCCH---
T ss_pred ccccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHH----hhcCCCCCCccccCH---
Confidence 4444556789999999999999999999999999999999999999875433211111 011111122222221
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Q 012219 409 QDIILVSTVAFSCLRSQPKSRPTMQLVSNEF 439 (468)
Q Consensus 409 ~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l 439 (468)
.+.+++.+||+.||++|||+.+++++.
T Consensus 246 ----~l~~li~~~l~~dp~~Rps~~~ll~~~ 272 (303)
T 3a7i_A 246 ----PLKEFVEACLNKEPSFRPTAKELLKHK 272 (303)
T ss_dssp ----HHHHHHHHHCCSSGGGSCCHHHHTTCH
T ss_pred ----HHHHHHHHHcCCChhhCcCHHHHhhCh
Confidence 266799999999999999999999654
No 136
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.6e-43 Score=341.19 Aligned_cols=260 Identities=20% Similarity=0.235 Sum_probs=190.9
Q ss_pred hCccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
++|.+.+.||+|+||.||+|... +++.||+|++....... ....+.+|++++++++||||+++++++...+..++||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 79 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEG--APCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVF 79 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC--------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccc--cchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEe
Confidence 57889999999999999999764 78999999997554321 1124557999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||++ |+|.+++..... .+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 80 e~~~-~~l~~~~~~~~~--~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~ 153 (324)
T 3mtl_A 80 EYLD-KDLKQYLDDCGN--IINMHNVKLFLFQLLRGLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIP 153 (324)
T ss_dssp ECCS-EEHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCCGGGEEECTTCCEEECSSSEEECC---
T ss_pred cccc-cCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHH---HCCccCCCcCHHHEEECCCCCEEEccCcccccccCC
Confidence 9997 589888876433 4889999999999999999999 779999999999999999999999999999876544
Q ss_pred CCCceeccccccccccccccC-CCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccC-----------
Q 012219 329 SSNRTLLAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLD----------- 396 (468)
Q Consensus 329 ~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~----------- 396 (468)
........||+.|+|||++.+ ..++.++|||||||++|||++|+.||....................+
T Consensus 154 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 233 (324)
T 3mtl_A 154 TKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEE 233 (324)
T ss_dssp ---------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHH
T ss_pred ccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchh
Confidence 444455678999999999876 56899999999999999999999999754322110000000000000
Q ss_pred ------CCCCCc-cchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 012219 397 ------PRLSPP-VDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSN 437 (468)
Q Consensus 397 ------~~~~~~-~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~ 437 (468)
+..... ...........+.+++.+||+.||++|||++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 234 FKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp HHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 000000 00000001123678999999999999999999985
No 137
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=3.4e-43 Score=334.43 Aligned_cols=259 Identities=17% Similarity=0.235 Sum_probs=202.3
Q ss_pred hhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEE-eeCCEEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFC-LHRKCMFL 246 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~-~~~~~~~l 246 (468)
.++|.+.+.||+|+||.||+|+. .+++.||||++...... +.+.+|+++++.++|++++..++++ ......++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~l 82 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH-----PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVM 82 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSC-----CHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcch-----hHHHHHHHHHHHhhcCCCCCccccccCCCCceEE
Confidence 46799999999999999999975 67999999998765432 3578999999999988866666655 56778899
Q ss_pred EEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee---CCCCCeEEeeccccc
Q 012219 247 IYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLL---NSELEAFVADFGVAR 323 (468)
Q Consensus 247 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll---~~~~~~kl~Dfg~~~ 323 (468)
||||+ +++|.+++.... ..+++.+++.++.|++.||+||| +.+|+||||||+||++ +.++.+||+|||+++
T Consensus 83 v~e~~-~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~ 156 (296)
T 3uzp_A 83 VMELL-GPSLEDLFNFCS--RKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 156 (296)
T ss_dssp EEECC-CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECCGGGTTCEEECCCTTCE
T ss_pred EEEec-CCCHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcc
Confidence 99999 899999997543 24899999999999999999999 7799999999999999 488999999999998
Q ss_pred cccCCCC-------CceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchh--hhcc-ccccc
Q 012219 324 LLNFDSS-------NRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWS--LDKN-IKLID 393 (468)
Q Consensus 324 ~~~~~~~-------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~--~~~~-~~~~~ 393 (468)
....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......... .... .....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 236 (296)
T 3uzp_A 157 KYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMS 236 (296)
T ss_dssp ECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccC
Confidence 7654322 123457999999999999999999999999999999999999999764321110 0000 00000
Q ss_pred ccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCCC
Q 012219 394 LLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNKA 445 (468)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~~ 445 (468)
...+......+ ..+.+++.+||+.||++|||++++++.|.+....
T Consensus 237 ~~~~~~~~~~~-------~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 281 (296)
T 3uzp_A 237 TPIEVLCKGYP-------SEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR 281 (296)
T ss_dssp SCHHHHTTTSC-------HHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHH
T ss_pred CchHHHHhhCC-------HHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHh
Confidence 00000001111 2277899999999999999999999999876544
No 138
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=3.5e-43 Score=331.53 Aligned_cols=255 Identities=25% Similarity=0.401 Sum_probs=204.6
Q ss_pred hhCccccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
.++|.+.+.||+|+||.||+|...+++.||+|++...... .+.+.+|++++++++||||+++++++.. +..++||
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~ 86 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS----PDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIIT 86 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSC----HHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEE
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCccc----HHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEE
Confidence 4679999999999999999999888889999999765432 4678899999999999999999999875 4578999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||+++++|.+++.... ...+++.+++.++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 87 e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 162 (279)
T 1qpc_A 87 EYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDN 162 (279)
T ss_dssp ECCTTCBHHHHTTSHH-HHTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSS
T ss_pred ecCCCCCHHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHhhEEEcCCCCEEECCCcccccccCc
Confidence 9999999999997532 224899999999999999999999 779999999999999999999999999999876432
Q ss_pred CC-CceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCCCCCCccchh
Q 012219 329 SS-NRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQK 406 (468)
Q Consensus 329 ~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (468)
.. ......++..|+|||.+.+..++.++||||||+++|||++ |+.||........... .............+
T Consensus 163 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~----~~~~~~~~~~~~~~-- 236 (279)
T 1qpc_A 163 EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQN----LERGYRMVRPDNCP-- 236 (279)
T ss_dssp CEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHH----HHTTCCCCCCTTCC--
T ss_pred ccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHH----HhcccCCCCccccc--
Confidence 21 1122346778999999988889999999999999999999 9999875433211110 00111111111111
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcC
Q 012219 407 IRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARN 443 (468)
Q Consensus 407 ~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~ 443 (468)
..+.+++.+|++.||++|||++++++.|....
T Consensus 237 -----~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 268 (279)
T 1qpc_A 237 -----EELYQLMRLCWKERPEDRPTFDYLRSVLEDFF 268 (279)
T ss_dssp -----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -----HHHHHHHHHHhccChhhCCCHHHHHHHHHHHH
Confidence 12677999999999999999999999887653
No 139
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=6.6e-44 Score=336.42 Aligned_cols=259 Identities=27% Similarity=0.420 Sum_probs=203.6
Q ss_pred hhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEee--CCEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLH--RKCMF 245 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~ 245 (468)
.++|.+.+.||+|+||.||++.. .+++.||+|++....... ...+.+.+|++++++++||||+++++++.. ....+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 83 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTE-AEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLY 83 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCH-HHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCH-HHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEE
Confidence 36799999999999999999975 478999999997654322 345678999999999999999999998854 57899
Q ss_pred EEEEeccCCChhhhhhcCc-ccCCCCHHHHHHHHHHHHHHHHHHHhcCCCC-----eEecCCCCCceeeCCCCCeEEeec
Q 012219 246 LIYEYMEMGSLFCVLRTDE-EAVGLDWAKRVNVVKGMCHALSYLHHDCTPP-----IVHRDISSNNVLLNSELEAFVADF 319 (468)
Q Consensus 246 lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~-----ivH~dlk~~NIll~~~~~~kl~Df 319 (468)
+||||+++|+|.+++.... ....+++..++.++.|++.||+||| +.+ |+||||||+||+++.++.+||+||
T Consensus 84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~df 160 (279)
T 2w5a_A 84 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECH---RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDF 160 (279)
T ss_dssp EEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HHC------CCCCCSGGGEEECSSSCEEECCC
T ss_pred EEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHh---cccCCCCeeEEeccchhhEEEcCCCCEEEecC
Confidence 9999999999999997543 2334899999999999999999999 445 999999999999999999999999
Q ss_pred cccccccCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCC
Q 012219 320 GVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRL 399 (468)
Q Consensus 320 g~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (468)
|+++.............|++.|+|||.+.+..++.++||||||+++|||+||+.||.......... .+.....+.+
T Consensus 161 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~----~i~~~~~~~~ 236 (279)
T 2w5a_A 161 GLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAG----KIREGKFRRI 236 (279)
T ss_dssp CHHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH----HHHHTCCCCC
T ss_pred chheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHH----HHhhcccccC
Confidence 999876543333334578999999999999899999999999999999999999997653221110 0001001111
Q ss_pred CCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhc
Q 012219 400 SPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIAR 442 (468)
Q Consensus 400 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~ 442 (468)
....+ . .+.+++.+||+.||++|||++++++++...
T Consensus 237 ~~~~~----~---~l~~li~~~l~~~p~~Rps~~~ll~~~~~~ 272 (279)
T 2w5a_A 237 PYRYS----D---ELNEIITRMLNLKDYHRPSVEEILENPLIL 272 (279)
T ss_dssp CTTSC----H---HHHHHHHHHTCSSGGGSCCHHHHHTSTTCC
T ss_pred CcccC----H---HHHHHHHHHcCCCcccCCCHHHHHhChhhh
Confidence 11111 1 267799999999999999999999876543
No 140
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.8e-43 Score=340.85 Aligned_cols=246 Identities=22% Similarity=0.352 Sum_probs=201.5
Q ss_pred HhhCccccceeeeeCCceEEEEE-cCCCCEEEEEEecCcchhhh-----hhHHHHHHHHHHHhhccCCceeeEEEEEeeC
Q 012219 168 ATEDFHIKYCIGTGGYGSVYRAR-LPSGKVVALKKLHRSETEEL-----ASLESFGNEARLLSQIRHRNIVKLYGFCLHR 241 (468)
Q Consensus 168 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~-----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 241 (468)
..++|.+.+.||+|+||.||+|. ..+++.||||++........ ...+.+.+|++++++++||||+++++++.+.
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 35689999999999999999997 45789999999986542211 1234567899999999999999999999999
Q ss_pred CEEEEEEEeccCC-ChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecc
Q 012219 242 KCMFLIYEYMEMG-SLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFG 320 (468)
Q Consensus 242 ~~~~lv~e~~~~g-sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 320 (468)
+..++||||+.+| +|.+++.... .+++..++.++.||+.||.||| +.+|+||||||+||+++.++.+||+|||
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~~~---~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~Dfg 175 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDRHP---RLDEPLASYIFRQLVSAVGYLR---LKDIIHRDIKDENIVIAEDFTIKLIDFG 175 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHTCC---CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCT
T ss_pred CEEEEEEEeCCCCccHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---hCCeEEeccCHHHEEEcCCCcEEEeecc
Confidence 9999999999777 9999987654 3899999999999999999999 7799999999999999999999999999
Q ss_pred ccccccCCCCCceeccccccccccccccCCCC-CccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCC
Q 012219 321 VARLLNFDSSNRTLLAGTYGYIAPELAYTMVV-TEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRL 399 (468)
Q Consensus 321 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (468)
+++..... .......||+.|+|||++.+..+ +.++|||||||++|||++|+.||....... .....+
T Consensus 176 ~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~---------~~~~~~-- 243 (335)
T 3dls_A 176 SAAYLERG-KLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETV---------EAAIHP-- 243 (335)
T ss_dssp TCEECCTT-CCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGGT---------TTCCCC--
T ss_pred cceECCCC-CceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHHH---------hhccCC--
Confidence 99876533 33344679999999999988776 789999999999999999999997532110 000000
Q ss_pred CCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 400 SPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 400 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
....+ . .+.+++.+||+.||++|||+.+++++
T Consensus 244 ~~~~~----~---~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 244 PYLVS----K---ELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp SSCCC----H---HHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred CcccC----H---HHHHHHHHHccCChhhCcCHHHHhcC
Confidence 11111 1 26679999999999999999999975
No 141
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=2.8e-43 Score=338.18 Aligned_cols=268 Identities=22% Similarity=0.334 Sum_probs=211.1
Q ss_pred CHHHHHHHhhCccccceeeeeCCceEEEEEc------CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhc-cCCceee
Q 012219 161 TFQDMIEATEDFHIKYCIGTGGYGSVYRARL------PSGKVVALKKLHRSETEELASLESFGNEARLLSQI-RHRNIVK 233 (468)
Q Consensus 161 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~ 233 (468)
...++....++|.+.+.||+|+||.||+|.. .+++.||||++...... ...+.+.+|++++.++ +||||++
T Consensus 18 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~~hp~iv~ 95 (316)
T 2xir_A 18 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH--SEHRALMSELKILIHIGHHLNVVN 95 (316)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCH--HHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred cccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCc--HHHHHHHHHHHHHHhcccCCCeee
Confidence 3444555568899999999999999999963 35789999999865433 2346788999999999 7999999
Q ss_pred EEEEEeeCC-EEEEEEEeccCCChhhhhhcCcc-------------cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEec
Q 012219 234 LYGFCLHRK-CMFLIYEYMEMGSLFCVLRTDEE-------------AVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHR 299 (468)
Q Consensus 234 l~~~~~~~~-~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~ 299 (468)
+++++...+ ..++||||+++|+|.+++..... ...+++..++.++.|++.||.||| +.+|+||
T Consensus 96 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~ 172 (316)
T 2xir_A 96 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHR 172 (316)
T ss_dssp EEEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHH---HTTCCCS
T ss_pred EEEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHH---hCCcccc
Confidence 999988754 48999999999999999976543 122789999999999999999999 7799999
Q ss_pred CCCCCceeeCCCCCeEEeeccccccccCCCCC--ceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCC
Q 012219 300 DISSNNVLLNSELEAFVADFGVARLLNFDSSN--RTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGE 376 (468)
Q Consensus 300 dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~ 376 (468)
||||+||+++.++.+||+|||+++........ .....+|+.|+|||++.+..++.++||||||+++|||+| |+.||.
T Consensus 173 dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~ 252 (316)
T 2xir_A 173 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP 252 (316)
T ss_dssp CCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred cCccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCc
Confidence 99999999999999999999999876433222 123457889999999999999999999999999999998 999997
Q ss_pred cccccchhhhcccccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcC
Q 012219 377 LLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARN 443 (468)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~ 443 (468)
........... .............. ..+.+++.+||+.||++|||+.+++++|....
T Consensus 253 ~~~~~~~~~~~---~~~~~~~~~~~~~~-------~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 309 (316)
T 2xir_A 253 GVKIDEEFCRR---LKEGTRMRAPDYTT-------PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 309 (316)
T ss_dssp TCCCSHHHHHH---HHHTCCCCCCTTCC-------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ccchhHHHHHH---hccCccCCCCCCCC-------HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 54432211111 00101111111111 12677999999999999999999999998764
No 142
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.7e-43 Score=331.04 Aligned_cols=255 Identities=24% Similarity=0.342 Sum_probs=203.2
Q ss_pred hCccccc-eeeeeCCceEEEEEcC---CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEE
Q 012219 170 EDFHIKY-CIGTGGYGSVYRARLP---SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMF 245 (468)
Q Consensus 170 ~~~~~~~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 245 (468)
++|.+.+ .||+|+||.||+|... ++..||+|+++..... ...+.+.+|++++++++||||+++++++ ..+..+
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~ 85 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEK--ADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALM 85 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCH--HHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccch--hHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcE
Confidence 4566666 8999999999999753 6788999999875432 3457789999999999999999999999 455689
Q ss_pred EEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccc
Q 012219 246 LIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLL 325 (468)
Q Consensus 246 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~ 325 (468)
+||||+++++|.+++.... ..+++..++.++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 86 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~ 160 (287)
T 1u59_A 86 LVMEMAGGGPLHKFLVGKR--EEIPVSNVAELLHQVSMGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKAL 160 (287)
T ss_dssp EEEECCTTEEHHHHHTTCT--TTSCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred EEEEeCCCCCHHHHHHhCC--ccCCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCchheEEEcCCCCEEECcccceeee
Confidence 9999999999999997533 34899999999999999999999 779999999999999999999999999999876
Q ss_pred cCCCCC---ceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCCCCCC
Q 012219 326 NFDSSN---RTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDPRLSP 401 (468)
Q Consensus 326 ~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (468)
...... .....+++.|+|||++.+..++.++||||||+++|||+| |+.||........... +.....+....
T Consensus 161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~----i~~~~~~~~~~ 236 (287)
T 1u59_A 161 GADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAF----IEQGKRMECPP 236 (287)
T ss_dssp TTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHH----HHTTCCCCCCT
T ss_pred ccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHH----HhcCCcCCCCC
Confidence 433221 122346789999999988889999999999999999999 9999976543221110 00111111222
Q ss_pred ccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcC
Q 012219 402 PVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARN 443 (468)
Q Consensus 402 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~ 443 (468)
..+ ..+.+++.+||+.||++||++.++++.|....
T Consensus 237 ~~~-------~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 271 (287)
T 1u59_A 237 ECP-------PELYALMSDCWIYKWEDRPDFLTVEQRMRACY 271 (287)
T ss_dssp TCC-------HHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CcC-------HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 222 12677999999999999999999999987653
No 143
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=5.7e-43 Score=333.31 Aligned_cols=259 Identities=24% Similarity=0.338 Sum_probs=201.0
Q ss_pred hCccccceeeeeCCceEEEEEcCC----CCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEee-CCEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLPS----GKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLH-RKCM 244 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~ 244 (468)
.+|.+.+.||+|+||.||+|...+ ...+|+|.+...... ...+.+.+|++++++++||||+++++++.. ++..
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 102 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDI--GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP 102 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSH--HHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCC
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCH--HHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCce
Confidence 468888999999999999997532 235899998764433 345778999999999999999999998654 5578
Q ss_pred EEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccccc
Q 012219 245 FLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARL 324 (468)
Q Consensus 245 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~ 324 (468)
++||||+++|+|.+++.... ..+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 103 ~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~ql~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~ 177 (298)
T 3f66_A 103 LVVLPYMKHGDLRNFIRNET--HNPTVKDLIGFGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARD 177 (298)
T ss_dssp EEEEECCTTCBHHHHHHCTT--CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECSCGGGCC
T ss_pred EEEEeCCCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEECCCCCEEECccccccc
Confidence 99999999999999997543 34789999999999999999999 77999999999999999999999999999986
Q ss_pred ccCCC----CCceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCCCC
Q 012219 325 LNFDS----SNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDPRL 399 (468)
Q Consensus 325 ~~~~~----~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (468)
..... .......+|+.|+|||.+.+..++.++||||||+++|||++ |.+||............. .......
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 253 (298)
T 3f66_A 178 MYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL----QGRRLLQ 253 (298)
T ss_dssp CSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHH----TTCCCCC
T ss_pred ccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHh----cCCCCCC
Confidence 54321 12233457789999999999999999999999999999999 566665443322111110 0001111
Q ss_pred CCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCCCC
Q 012219 400 SPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNKAP 446 (468)
Q Consensus 400 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~~~ 446 (468)
....+ . .+.+++.+||+.||++|||++++++.|.++....
T Consensus 254 ~~~~~----~---~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~ 293 (298)
T 3f66_A 254 PEYCP----D---PLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 293 (298)
T ss_dssp CTTCC----H---HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTS
T ss_pred CccCC----H---HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 11111 1 2677999999999999999999999998876543
No 144
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=5.4e-43 Score=331.35 Aligned_cols=252 Identities=26% Similarity=0.392 Sum_probs=196.1
Q ss_pred hCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
++|.+.+.||+|+||.||++.. .++..+|+|++...... ...+.+.+|++++++++||||+++++++.+....++||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 99 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQ--VPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVM 99 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCC--SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccc--hhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEE
Confidence 5799999999999999999975 56899999999765432 23567889999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCc-ccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee---CCCCCeEEeecccccc
Q 012219 249 EYMEMGSLFCVLRTDE-EAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLL---NSELEAFVADFGVARL 324 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll---~~~~~~kl~Dfg~~~~ 324 (468)
||+++|+|.+++.... ....+++..++.++.|++.||+||| +.+|+||||||+||++ +.++.+||+|||+++.
T Consensus 100 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~ 176 (285)
T 3is5_A 100 ETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAEL 176 (285)
T ss_dssp CCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC
T ss_pred EeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEEECCCCHHHEEEecCCCCCCEEEEeeeccee
Confidence 9999999999886532 2345899999999999999999999 7799999999999999 5568899999999977
Q ss_pred ccCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccc
Q 012219 325 LNFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVD 404 (468)
Q Consensus 325 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (468)
.... .......|++.|+|||++. ..++.++||||||+++|||++|+.||............ ....+.......
T Consensus 177 ~~~~-~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~-----~~~~~~~~~~~~ 249 (285)
T 3is5_A 177 FKSD-EHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKA-----TYKEPNYAVECR 249 (285)
T ss_dssp -----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH-----HHCCCCCCC--C
T ss_pred cCCc-ccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhh-----ccCCcccccccC
Confidence 6432 2334457899999999875 56889999999999999999999999754432211110 000111111100
Q ss_pred hhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 012219 405 QKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSN 437 (468)
Q Consensus 405 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~ 437 (468)
... ..+.+++.+||+.||++|||+.|+++
T Consensus 250 ~~~----~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 250 PLT----PQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp CCC----HHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred cCC----HHHHHHHHHHccCChhhCcCHHHHhc
Confidence 011 12667999999999999999999985
No 145
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=2.7e-43 Score=340.13 Aligned_cols=264 Identities=26% Similarity=0.398 Sum_probs=206.0
Q ss_pred hCccccceeeeeCCceEEEEEc-----CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEe--eCC
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-----PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCL--HRK 242 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~--~~~ 242 (468)
++|.+.+.||+|+||.||+|++ .+++.||||++...... ..+.+.+|++++++++||||+++++++. ...
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 99 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPD---QQRDFQREIQILKALHSDFIVKYRGVSYGPGRQ 99 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHH---HHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSC
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHH---HHHHHHHHHHHHHhcCCCceeEEEEEEecCCCc
Confidence 6799999999999999999983 46889999999876443 3467889999999999999999999887 456
Q ss_pred EEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccc
Q 012219 243 CMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVA 322 (468)
Q Consensus 243 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~ 322 (468)
..++||||+++++|.+++..... .+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++
T Consensus 100 ~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~ 174 (327)
T 3lxl_A 100 SLRLVMEYLPSGCLRDFLQRHRA--RLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLA 174 (327)
T ss_dssp EEEEEEECCTTCBHHHHHHHHGG--GCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCGGGC
T ss_pred eEEEEEeecCCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChhhEEECCCCCEEEcccccc
Confidence 78999999999999999976432 3899999999999999999999 779999999999999999999999999999
Q ss_pred ccccCCCC---CceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhh-------cccccc
Q 012219 323 RLLNFDSS---NRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLD-------KNIKLI 392 (468)
Q Consensus 323 ~~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~-------~~~~~~ 392 (468)
+....... ......++..|+|||++.+..++.++||||||+++|+|++|+.||........... ......
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (327)
T 3lxl_A 175 KLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLL 254 (327)
T ss_dssp EECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHH
T ss_pred eecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHH
Confidence 87653322 12234578889999999988899999999999999999999999864322110000 000011
Q ss_pred cccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCC
Q 012219 393 DLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNK 444 (468)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~ 444 (468)
+.+............. ..+.+++.+||+.||++|||+.++++.|+....
T Consensus 255 ~~~~~~~~~~~~~~~~---~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~ 303 (327)
T 3lxl_A 255 ELLEEGQRLPAPPACP---AEVHELMKLCWAPSPQDRPSFSALGPQLDMLWS 303 (327)
T ss_dssp HHHHTTCCCCCCTTCC---HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC--
T ss_pred HHhhcccCCCCCCccc---HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 1111111111111111 126789999999999999999999999988754
No 146
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.9e-43 Score=331.86 Aligned_cols=263 Identities=24% Similarity=0.327 Sum_probs=203.3
Q ss_pred CccccceeeeeCCceEEEEEcC-C---CCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEE-E
Q 012219 171 DFHIKYCIGTGGYGSVYRARLP-S---GKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCM-F 245 (468)
Q Consensus 171 ~~~~~~~lg~G~~g~Vy~~~~~-~---~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~-~ 245 (468)
.|...+.||+|+||.||+|... + +..+|+|.+...... ...+.|.+|++++++++||||+++++++...+.. +
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 99 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEM--QQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPH 99 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSH--HHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccH--HHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcE
Confidence 4556689999999999999742 2 237999999764433 3457889999999999999999999999876554 9
Q ss_pred EEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccc
Q 012219 246 LIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLL 325 (468)
Q Consensus 246 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~ 325 (468)
+|+||+.+|+|.+++.... ..+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 100 ~v~e~~~~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~ 174 (298)
T 3pls_A 100 VLLPYMCHGDLLQFIRSPQ--RNPTVKDLISFGLQVARGMEYLA---EQKFVHRDLAARNCMLDESFTVKVADFGLARDI 174 (298)
T ss_dssp EEECCCTTCBHHHHHHCTT--CCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECCTTSSCTT
T ss_pred EEEecccCCCHHHHHhccc--cCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEEeCcCCCcccc
Confidence 9999999999999997643 34789999999999999999999 779999999999999999999999999999765
Q ss_pred cCC----CCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCC-CCcccccchhhhcccccccccCCCCC
Q 012219 326 NFD----SSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHP-GELLSSSSWSLDKNIKLIDLLDPRLS 400 (468)
Q Consensus 326 ~~~----~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (468)
... ........+++.|+|||.+.+..++.++||||||+++|||+||..| |......... .. ..........
T Consensus 175 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~-~~---~~~~~~~~~~ 250 (298)
T 3pls_A 175 LDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLT-HF---LAQGRRLPQP 250 (298)
T ss_dssp TTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHH-HH---HHTTCCCCCC
T ss_pred cCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHH-HH---hhcCCCCCCC
Confidence 321 1222335678899999999999999999999999999999995555 4432221111 10 0000011111
Q ss_pred CccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCCCCCCCCc
Q 012219 401 PPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNKAPMQKPF 451 (468)
Q Consensus 401 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~~~~~~~~ 451 (468)
...+ + .+.+++.+||+.||++|||++++++.|.+.........+
T Consensus 251 ~~~~----~---~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~~~~ 294 (298)
T 3pls_A 251 EYCP----D---SLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLGDHY 294 (298)
T ss_dssp TTCC----H---HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCSCCB
T ss_pred ccch----H---HHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHhccch
Confidence 1111 1 267799999999999999999999999887665444444
No 147
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=1.1e-42 Score=327.33 Aligned_cols=253 Identities=27% Similarity=0.399 Sum_probs=202.2
Q ss_pred hhCccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLI 247 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 247 (468)
.++|.+.+.||+|+||.||+|... +++.||+|++...... ...+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLF 83 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCT--THHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccch--hhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEE
Confidence 467999999999999999999764 7899999999754432 2346788999999999999999999999999999999
Q ss_pred EEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccC
Q 012219 248 YEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNF 327 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~ 327 (468)
+||+++++|.+++.... .+++..++.++.|++.||.||| +.+++||||||+||+++.++.+||+|||++.....
T Consensus 84 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~ 157 (276)
T 2yex_A 84 LEYCSGGELFDRIEPDI---GMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRY 157 (276)
T ss_dssp EECCTTEEGGGGSBTTT---BCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEE
T ss_pred EEecCCCcHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCChHHEEEccCCCEEEeeCCCccccCC
Confidence 99999999999986543 3899999999999999999999 77999999999999999999999999999976542
Q ss_pred CC--CCceeccccccccccccccCCCC-CccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccc
Q 012219 328 DS--SNRTLLAGTYGYIAPELAYTMVV-TEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVD 404 (468)
Q Consensus 328 ~~--~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (468)
.. .......|++.|+|||.+.+..+ +.++||||||+++|||++|+.||.................. .. ...
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~----~~-~~~- 231 (276)
T 2yex_A 158 NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT----YL-NPW- 231 (276)
T ss_dssp TTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCT----TS-TTG-
T ss_pred CcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhccc----cc-Cch-
Confidence 22 22334568999999999987665 77899999999999999999999764432211111100000 00 000
Q ss_pred hhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 405 QKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 405 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
..... .+.+++.+||+.||++|||+.+++++
T Consensus 232 ~~~~~---~~~~li~~~l~~~p~~Rps~~~il~~ 262 (276)
T 2yex_A 232 KKIDS---APLALLHKILVENPSARITIPDIKKD 262 (276)
T ss_dssp GGSCH---HHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred hhcCH---HHHHHHHHHCCCCchhCCCHHHHhcC
Confidence 11111 26679999999999999999999863
No 148
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=8.1e-43 Score=333.92 Aligned_cols=264 Identities=25% Similarity=0.315 Sum_probs=197.0
Q ss_pred hhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchh--hhhhHHHHHHHHHHHhhcc---CCceeeEEEEEeeCC
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETE--ELASLESFGNEARLLSQIR---HRNIVKLYGFCLHRK 242 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~~ 242 (468)
.++|.+.+.||+|+||+||+|+. .+++.||+|++...... .......+.+|++++++++ ||||+++++++....
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~ 87 (308)
T 3g33_A 8 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSR 87 (308)
T ss_dssp --CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECC
T ss_pred ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccC
Confidence 57899999999999999999985 57899999998743311 1111235567777777665 999999999998754
Q ss_pred -----EEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEe
Q 012219 243 -----CMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVA 317 (468)
Q Consensus 243 -----~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~ 317 (468)
..++||||+. |+|.+++..... ..+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+
T Consensus 88 ~~~~~~~~lv~e~~~-~~L~~~~~~~~~-~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~ 162 (308)
T 3g33_A 88 TDREIKVTLVFEHVD-QDLRTYLDKAPP-PGLPAETIKDLMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGTVKLA 162 (308)
T ss_dssp SSSEEEEEEEEECCC-CBHHHHHHTCCT-TCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCTTTEEECTTSCEEEC
T ss_pred CCCceeEEEEehhhh-cCHHHHHhhccC-CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCEEEe
Confidence 5899999997 599999976543 33899999999999999999999 7799999999999999999999999
Q ss_pred eccccccccCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhccccc------
Q 012219 318 DFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKL------ 391 (468)
Q Consensus 318 Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~------ 391 (468)
|||+++..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||................
T Consensus 163 Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~ 241 (308)
T 3g33_A 163 DFGLARIYSYQ-MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPED 241 (308)
T ss_dssp SCSCTTTSTTC-CCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTT
T ss_pred eCccccccCCC-cccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChh
Confidence 99999876432 33345678999999999999999999999999999999999999997543321110000000
Q ss_pred -----c----cccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 392 -----I----DLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 392 -----~----~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
. ....+...........+....+.+++.+||+.||++|||+.+++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 242 DWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp TSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 0 0000000000000000111236789999999999999999998854
No 149
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=8e-43 Score=334.70 Aligned_cols=262 Identities=22% Similarity=0.362 Sum_probs=196.8
Q ss_pred HhhCccccceeeeeCCceEEEEEcC----CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCE
Q 012219 168 ATEDFHIKYCIGTGGYGSVYRARLP----SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKC 243 (468)
Q Consensus 168 ~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 243 (468)
..++|.+.+.||+|+||.||+|... .+..||+|++....... ...+.+.+|++++++++||||+++++++.....
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 110 (313)
T 3brb_A 32 DRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQ-REIEEFLSEAACMKDFSHPNVIRLLGVCIEMSS 110 (313)
T ss_dssp CGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCH-HHHHHHHHHHHHHHTCCCTTBCCCCEEEEC---
T ss_pred CHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccch-hHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccc
Confidence 4578999999999999999999653 34589999997654332 345678999999999999999999999987543
Q ss_pred -----EEEEEEeccCCChhhhhhcC---cccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeE
Q 012219 244 -----MFLIYEYMEMGSLFCVLRTD---EEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAF 315 (468)
Q Consensus 244 -----~~lv~e~~~~gsL~~~l~~~---~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~k 315 (468)
.++||||+++|+|.+++... .....+++..++.++.||+.||.||| +.+|+||||||+||+++.++.+|
T Consensus 111 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~k 187 (313)
T 3brb_A 111 QGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLS---NRNFLHRDLAARNCMLRDDMTVC 187 (313)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCSGGGEEECTTSCEE
T ss_pred cCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEE
Confidence 59999999999999998542 22345899999999999999999999 78999999999999999999999
Q ss_pred EeeccccccccCCC--CCceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccc
Q 012219 316 VADFGVARLLNFDS--SNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLI 392 (468)
Q Consensus 316 l~Dfg~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~ 392 (468)
|+|||+++...... .......+++.|+|||.+.+..++.++||||||+++|||++ |+.||........... ..
T Consensus 188 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~----~~ 263 (313)
T 3brb_A 188 VADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDY----LL 263 (313)
T ss_dssp ECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHH----HH
T ss_pred EeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHH----HH
Confidence 99999998764322 12233457889999999999999999999999999999999 8999875443221111 00
Q ss_pred cccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCC
Q 012219 393 DLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNK 444 (468)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~ 444 (468)
....+....... ..+.+++.+||+.||++|||+.++++.|.+...
T Consensus 264 ~~~~~~~~~~~~-------~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~ 308 (313)
T 3brb_A 264 HGHRLKQPEDCL-------DELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLE 308 (313)
T ss_dssp TTCCCCCBTTCC-------HHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cCCCCCCCcccc-------HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 001111111111 126779999999999999999999999987643
No 150
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.1e-43 Score=337.58 Aligned_cols=258 Identities=29% Similarity=0.391 Sum_probs=199.7
Q ss_pred hCccccceeeeeCCceEEEEEcCC-----CCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLPS-----GKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCM 244 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 244 (468)
++|.+.+.||+|+||.||+|.... +..||||++...... .....|.+|++++++++||||+++++++...+..
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 121 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTE--KQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPM 121 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCH--HHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCH--HHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCc
Confidence 467788999999999999997532 246999999765433 2346789999999999999999999999999999
Q ss_pred EEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccccc
Q 012219 245 FLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARL 324 (468)
Q Consensus 245 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~ 324 (468)
++||||+++|+|.+++.... ..+++.+++.++.||+.||.||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 122 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~ 196 (333)
T 1mqb_A 122 MIITEYMENGALDKFLREKD--GEFSVLQLVGMLRGIAAGMKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRV 196 (333)
T ss_dssp EEEEECCTTEEHHHHHHHTT--TCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCCCC---
T ss_pred EEEEeCCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChheEEECCCCcEEECCCCcchh
Confidence 99999999999999997643 34899999999999999999999 77999999999999999999999999999987
Q ss_pred ccCCCCC---ceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCCCCC
Q 012219 325 LNFDSSN---RTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDPRLS 400 (468)
Q Consensus 325 ~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (468)
....... .....+++.|+|||++.+..++.++||||||+++|||++ |+.||.......... ...+.......
T Consensus 197 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~----~~~~~~~~~~~ 272 (333)
T 1mqb_A 197 LEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMK----AINDGFRLPTP 272 (333)
T ss_dssp --------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHH----HHHTTCCCCCC
T ss_pred hccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHH----HHHCCCcCCCc
Confidence 6432211 122345778999999998999999999999999999999 999997543221110 00111111111
Q ss_pred CccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCCC
Q 012219 401 PPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNKA 445 (468)
Q Consensus 401 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~~ 445 (468)
.... ..+.+++.+||+.||++||++.++++.|.+....
T Consensus 273 ~~~~-------~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~ 310 (333)
T 1mqb_A 273 MDCP-------SAIYQLMMQCWQQERARRPKFADIVSILDKLIRA 310 (333)
T ss_dssp TTCB-------HHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred ccCC-------HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 1111 1267799999999999999999999999876543
No 151
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=8.1e-43 Score=328.69 Aligned_cols=250 Identities=22% Similarity=0.309 Sum_probs=200.4
Q ss_pred hhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLI 247 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 247 (468)
.++|.+.+.||+|+||.||+|.. .++..+|+|++...... ..+.+.+|++++++++||||+++++++.+....++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVE---DVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLV 84 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCS---CHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccc---hHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEE
Confidence 46799999999999999999975 45779999999765432 346788999999999999999999999999999999
Q ss_pred EEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee---CCCCCeEEeecccccc
Q 012219 248 YEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLL---NSELEAFVADFGVARL 324 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll---~~~~~~kl~Dfg~~~~ 324 (468)
|||+++++|.+++.... .+++..++.++.|++.||.||| +.+|+||||||+||++ +.++.+||+|||++..
T Consensus 85 ~e~~~~~~L~~~~~~~~---~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~ 158 (277)
T 3f3z_A 85 MELCTGGELFERVVHKR---VFRESDAARIMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAAR 158 (277)
T ss_dssp EECCCSCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred EeccCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEecCCCCCcEEEEeccccee
Confidence 99999999999887543 3899999999999999999999 7799999999999999 7889999999999987
Q ss_pred ccCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccc
Q 012219 325 LNFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVD 404 (468)
Q Consensus 325 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (468)
.... .......||+.|+|||++.+. ++.++||||||+++|||++|+.||............ .......+.
T Consensus 159 ~~~~-~~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~-------~~~~~~~~~- 228 (277)
T 3f3z_A 159 FKPG-KMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKI-------REGTFTFPE- 228 (277)
T ss_dssp CCTT-SCBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH-------HHCCCCCCH-
T ss_pred ccCc-cchhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHH-------HhCCCCCCc-
Confidence 6533 333445799999999988654 899999999999999999999999754332111110 000011100
Q ss_pred hhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 012219 405 QKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSN 437 (468)
Q Consensus 405 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~ 437 (468)
.........+.+++.+||+.||++|||+.++++
T Consensus 229 ~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 229 KDWLNVSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred hhhhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000001123678999999999999999999884
No 152
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=6.5e-43 Score=329.08 Aligned_cols=253 Identities=23% Similarity=0.375 Sum_probs=197.4
Q ss_pred hCccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
++|.+.+.||+|+||.||+|... +++.||+|++...........+.+.+|+++++.++||||+++++++...+..++||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 90 (276)
T 2h6d_A 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVM 90 (276)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEE
Confidence 57999999999999999999764 79999999997655444445678899999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||+++++|.+++.... .+++..++.++.|++.||.||| +.+++||||||+||+++.++.+||+|||++......
T Consensus 91 e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~ 164 (276)
T 2h6d_A 91 EYVSGGELFDYICKHG---RVEEMEARRLFQQILSAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG 164 (276)
T ss_dssp ECCCSCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHH---HHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC-
T ss_pred eccCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChhhEEECCCCCEEEeecccccccCCC
Confidence 9999999999997543 3899999999999999999999 679999999999999999999999999999876432
Q ss_pred CCCceeccccccccccccccCCCC-CccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhH
Q 012219 329 SSNRTLLAGTYGYIAPELAYTMVV-TEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKI 407 (468)
Q Consensus 329 ~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (468)
.......|++.|+|||.+.+..+ +.++||||||+++|+|++|+.||........... .... .........
T Consensus 165 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~----~~~~-~~~~~~~~~--- 235 (276)
T 2h6d_A 165 -EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKK----IRGG-VFYIPEYLN--- 235 (276)
T ss_dssp -------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH----HHHC-CCCCCTTSC---
T ss_pred -cceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHH----hhcC-cccCchhcC---
Confidence 22334568999999999987765 6899999999999999999999975432111100 0000 011111111
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHHH-HHh
Q 012219 408 RQDIILVSTVAFSCLRSQPKSRPTMQLVSNE-FIA 441 (468)
Q Consensus 408 ~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~-l~~ 441 (468)
. .+.+++.+||+.||++|||+.+++++ +.+
T Consensus 236 -~---~l~~li~~~l~~~p~~Rps~~~~l~h~~~~ 266 (276)
T 2h6d_A 236 -R---SVATLLMHMLQVDPLKRATIKDIREHEWFK 266 (276)
T ss_dssp -H---HHHHHHHHHTCSSGGGSCCHHHHHHSHHHH
T ss_pred -H---HHHHHHHHHccCChhhCCCHHHHHhChhhc
Confidence 1 26679999999999999999999974 443
No 153
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=1.7e-42 Score=339.41 Aligned_cols=262 Identities=23% Similarity=0.332 Sum_probs=205.3
Q ss_pred HHHHHHHhhCccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcch-----hhhhhHHHHHHHHHHHhhc-cCCceeeE
Q 012219 162 FQDMIEATEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSET-----EELASLESFGNEARLLSQI-RHRNIVKL 234 (468)
Q Consensus 162 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-----~~~~~~~~~~~e~~~l~~l-~h~niv~l 234 (468)
+.......++|.+.+.||+|+||.||+|... +|+.||||++..... ......+.+.+|+.++.++ +||||+++
T Consensus 86 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 165 (365)
T 2y7j_A 86 WAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITL 165 (365)
T ss_dssp HHHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCE
T ss_pred chhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence 3344455678999999999999999999864 799999999875431 1122346788999999999 79999999
Q ss_pred EEEEeeCCEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCe
Q 012219 235 YGFCLHRKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEA 314 (468)
Q Consensus 235 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~ 314 (468)
++++......++||||+++++|.+++.... .+++..+..++.||+.||.||| +.||+||||||+||+++.++.+
T Consensus 166 ~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~---~l~~~~~~~i~~qi~~~L~~LH---~~gi~H~Dlkp~NIl~~~~~~i 239 (365)
T 2y7j_A 166 IDSYESSSFMFLVFDLMRKGELFDYLTEKV---ALSEKETRSIMRSLLEAVSFLH---ANNIVHRDLKPENILLDDNMQI 239 (365)
T ss_dssp EEEEEBSSEEEEEECCCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCE
T ss_pred EEEEeeCCEEEEEEEeCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCE
Confidence 999999999999999999999999997532 4899999999999999999999 6799999999999999999999
Q ss_pred EEeeccccccccCCCCCceeccccccccccccccC------CCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcc
Q 012219 315 FVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYT------MVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKN 388 (468)
Q Consensus 315 kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~------~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~ 388 (468)
||+|||++..+... .......||+.|+|||++.+ ..++.++|||||||++|||+||+.||...........
T Consensus 240 kl~DfG~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~-- 316 (365)
T 2y7j_A 240 RLSDFGFSCHLEPG-EKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRM-- 316 (365)
T ss_dssp EECCCTTCEECCTT-CCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH--
T ss_pred EEEecCcccccCCC-cccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHH--
Confidence 99999999876533 23344679999999998863 3588899999999999999999999975332111000
Q ss_pred cccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 389 IKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
+......... .........+.+++.+||+.||++|||+.+++++
T Consensus 317 -----i~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 360 (365)
T 2y7j_A 317 -----IMEGQYQFSS-PEWDDRSSTVKDLISRLLQVDPEARLTAEQALQH 360 (365)
T ss_dssp -----HHHTCCCCCH-HHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred -----HHhCCCCCCC-cccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 0000000000 0000111236789999999999999999999864
No 154
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=4.9e-43 Score=339.81 Aligned_cols=251 Identities=23% Similarity=0.306 Sum_probs=198.2
Q ss_pred hhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhc-cCCceeeEEEEEeeCCEEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQI-RHRNIVKLYGFCLHRKCMFL 246 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 246 (468)
.++|.+.+.||+|+||.||+|.. .+++.||+|++..... .+.+|++++.++ +||||+++++++.+.+..++
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~-------~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~l 93 (342)
T 2qr7_A 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR-------DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYV 93 (342)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC-------CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEE
T ss_pred cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC-------ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEE
Confidence 46799999999999999999975 4688999999976542 234688888888 79999999999999999999
Q ss_pred EEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCC----CCeEEeecccc
Q 012219 247 IYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSE----LEAFVADFGVA 322 (468)
Q Consensus 247 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~----~~~kl~Dfg~~ 322 (468)
||||+++|+|.+++.... .+++.++..++.||+.||.||| +.+|+||||||+||++.++ +.+||+|||++
T Consensus 94 v~E~~~gg~L~~~i~~~~---~~~~~~~~~~~~qi~~al~~lH---~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a 167 (342)
T 2qr7_A 94 VTELMKGGELLDKILRQK---FFSEREASAVLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFA 167 (342)
T ss_dssp EECCCCSCBHHHHHHTCT---TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSCSGGGEEECCCTTC
T ss_pred EEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCcEeccCCHHHEEEecCCCCcCeEEEEECCCc
Confidence 999999999999997643 3899999999999999999999 7799999999999998543 35999999999
Q ss_pred ccccCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccch-hhhcccccccccCCCCCC
Q 012219 323 RLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSW-SLDKNIKLIDLLDPRLSP 401 (468)
Q Consensus 323 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 401 (468)
+.............||+.|+|||++.+..++.++|||||||++|||++|+.||........ ......... ......
T Consensus 168 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~---~~~~~~ 244 (342)
T 2qr7_A 168 KQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSG---KFSLSG 244 (342)
T ss_dssp EECBCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHC---CCCCCS
T ss_pred ccCcCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccC---CcccCc
Confidence 8776554445566899999999999888899999999999999999999999975322111 000000000 001111
Q ss_pred ccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 402 PVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 402 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
.......+ .+.+++.+||+.||++|||+.+++++
T Consensus 245 ~~~~~~s~---~~~~li~~~L~~dP~~R~t~~~il~h 278 (342)
T 2qr7_A 245 GYWNSVSD---TAKDLVSKMLHVDPHQRLTAALVLRH 278 (342)
T ss_dssp TTTTTSCH---HHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred cccccCCH---HHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 11111112 26679999999999999999999854
No 155
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=3.4e-43 Score=344.07 Aligned_cols=206 Identities=24% Similarity=0.320 Sum_probs=177.6
Q ss_pred CHHHHHHHhhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhcc-----CCceeeE
Q 012219 161 TFQDMIEATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIR-----HRNIVKL 234 (468)
Q Consensus 161 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-----h~niv~l 234 (468)
++++.....++|.+.+.||+|+||.||+|+. .+++.||||++..... ..+.+..|+++++.++ ||||+++
T Consensus 26 ~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~~e~~~l~~l~~~~~~h~~iv~~ 101 (360)
T 3llt_A 26 SWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKK----YTRSAKIEADILKKIQNDDINNNNIVKY 101 (360)
T ss_dssp CCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCHH----HHHHHHHHHHHHHHTCCCSTTGGGBCCE
T ss_pred eeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccchh----hhhhhHHHHHHHHHhcccCCCCCCeecc
Confidence 3344344467899999999999999999975 5789999999975432 2356778999999986 9999999
Q ss_pred EEEEeeCCEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCC----
Q 012219 235 YGFCLHRKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNS---- 310 (468)
Q Consensus 235 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~---- 310 (468)
++++...+..++||||+ +++|.+++..... ..+++..+..++.||+.||+||| +.+|+||||||+|||++.
T Consensus 102 ~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~-~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~ 176 (360)
T 3llt_A 102 HGKFMYYDHMCLIFEPL-GPSLYEIITRNNY-NGFHIEDIKLYCIEILKALNYLR---KMSLTHTDLKPENILLDDPYFE 176 (360)
T ss_dssp EEEEEETTEEEEEECCC-CCBHHHHHHHTTT-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCTTCC
T ss_pred cceeeECCeeEEEEcCC-CCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCcccEEEcccccc
Confidence 99999999999999999 8999999976543 24899999999999999999999 779999999999999975
Q ss_pred ---------------------CCCeEEeeccccccccCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHH
Q 012219 311 ---------------------ELEAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVL 369 (468)
Q Consensus 311 ---------------------~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~ 369 (468)
++.+||+|||+++.... ......||+.|+|||++.+..++.++|||||||++|||+
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell 253 (360)
T 3llt_A 177 KSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSD---YHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELY 253 (360)
T ss_dssp EEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTS---CCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHH
T ss_pred ccccchhcccccccccccccCCCCEEEEeccCceecCC---CCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHH
Confidence 78999999999986542 223457899999999999999999999999999999999
Q ss_pred hCCCCCCcc
Q 012219 370 MGKHPGELL 378 (468)
Q Consensus 370 tg~~p~~~~ 378 (468)
||+.||...
T Consensus 254 ~g~~pf~~~ 262 (360)
T 3llt_A 254 TGSLLFRTH 262 (360)
T ss_dssp HSSCSCCCS
T ss_pred HCCCCCCCC
Confidence 999999753
No 156
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=7e-43 Score=330.11 Aligned_cols=253 Identities=23% Similarity=0.323 Sum_probs=200.0
Q ss_pred hCccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhh---hhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEEL---ASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMF 245 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 245 (468)
++|.+.+.||+|+||.||+|... +++.||+|++........ ...+.+.+|++++++++||||+++++++......+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 56899999999999999999765 689999999976543211 13567899999999999999999999999999999
Q ss_pred EEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCC----CeEEeeccc
Q 012219 246 LIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSEL----EAFVADFGV 321 (468)
Q Consensus 246 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~----~~kl~Dfg~ 321 (468)
+||||+++++|.+++.... .+++.+++.++.|++.||.||| +.+++||||||+||+++.++ .+||+|||+
T Consensus 85 lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~ 158 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEKE---SLTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGI 158 (283)
T ss_dssp EEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSSSSCCEEECCCTT
T ss_pred EEEeecCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChHHEEEecCCCCCCceEEEeccc
Confidence 9999999999999997533 4899999999999999999999 77999999999999998887 899999999
Q ss_pred cccccCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCC
Q 012219 322 ARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSP 401 (468)
Q Consensus 322 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (468)
++..... .......|++.|+|||++.+..++.++||||||+++|+|++|+.||........... . . ........
T Consensus 159 ~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~-~---~-~~~~~~~~ 232 (283)
T 3bhy_A 159 AHKIEAG-NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTN-I---S-AVNYDFDE 232 (283)
T ss_dssp CEECC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHH-H---H-TTCCCCCH
T ss_pred ceeccCC-CcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHH-h---H-hcccCCcc
Confidence 9876432 223345689999999999989999999999999999999999999975432211100 0 0 00011110
Q ss_pred ccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 012219 402 PVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSN 437 (468)
Q Consensus 402 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~ 437 (468)
.. .......+.+++.+||+.||++|||+.++++
T Consensus 233 ~~---~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 265 (283)
T 3bhy_A 233 EY---FSNTSELAKDFIRRLLVKDPKRRMTIAQSLE 265 (283)
T ss_dssp HH---HTTCCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred hh---cccCCHHHHHHHHHHccCCHhHCcCHHHHHh
Confidence 00 0011123678999999999999999999986
No 157
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=2.9e-42 Score=334.93 Aligned_cols=268 Identities=23% Similarity=0.347 Sum_probs=206.5
Q ss_pred HHHHhhCccccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhh--ccCCceeeEEEEEeeCC
Q 012219 165 MIEATEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQ--IRHRNIVKLYGFCLHRK 242 (468)
Q Consensus 165 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~~~ 242 (468)
-....++|.+.+.||+|+||.||+|+. +++.||||++.... .+.+.+|.+++.. ++||||+++++++....
T Consensus 37 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~------~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~ 109 (342)
T 1b6c_B 37 QRTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE------ERSWFREAEIYQTVMLRHENILGFIAADNKDN 109 (342)
T ss_dssp HHHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGGG------HHHHHHHHHHHHHSCCCCTTBCCEEEEEECCC
T ss_pred cccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCchh------HHHHHHHHHHHHHhhcCCCcEEEEEeeecccC
Confidence 344567899999999999999999988 58999999996432 2467788888887 78999999999998775
Q ss_pred ----EEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcC-----CCCeEecCCCCCceeeCCCCC
Q 012219 243 ----CMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDC-----TPPIVHRDISSNNVLLNSELE 313 (468)
Q Consensus 243 ----~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~-----~~~ivH~dlk~~NIll~~~~~ 313 (468)
..++||||+++|+|.+++... .+++.+++.++.|++.||.|||... +.+|+||||||+||+++.++.
T Consensus 110 ~~~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~ 185 (342)
T 1b6c_B 110 GTWTQLWLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGT 185 (342)
T ss_dssp SSCCCEEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSC
T ss_pred CccceeEEEEeecCCCcHHHHHhcc----CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCC
Confidence 789999999999999999753 3899999999999999999999321 458999999999999999999
Q ss_pred eEEeeccccccccCCCCC----ceeccccccccccccccCC------CCCccchhhHHHHHHHHHHhC----------CC
Q 012219 314 AFVADFGVARLLNFDSSN----RTLLAGTYGYIAPELAYTM------VVTEKCDVYSFGVVALEVLMG----------KH 373 (468)
Q Consensus 314 ~kl~Dfg~~~~~~~~~~~----~~~~~g~~~y~aPE~~~~~------~~~~~~Dv~s~Gvil~el~tg----------~~ 373 (468)
+||+|||+++........ .....||+.|+|||++.+. .++.++|||||||++|||+|| +.
T Consensus 186 ~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~ 265 (342)
T 1b6c_B 186 CCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQL 265 (342)
T ss_dssp EEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCC
T ss_pred EEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCccccccc
Confidence 999999999876543321 2334689999999998765 344789999999999999999 67
Q ss_pred CCCcccccchhhhc--ccccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCCC
Q 012219 374 PGELLSSSSWSLDK--NIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNKA 445 (468)
Q Consensus 374 p~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~~ 445 (468)
||............ .........+.+.... ...+....+.+++.+||+.||++|||+.+|++.|+.+.+.
T Consensus 266 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~ 337 (342)
T 1b6c_B 266 PYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRW--QSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 337 (342)
T ss_dssp TTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGG--GTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred CccccCcCcccHHHHHHHHHHHHhCCCCcccc--cchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHH
Confidence 77543221111110 0001111122222111 1113344588899999999999999999999999887543
No 158
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=3.2e-43 Score=345.65 Aligned_cols=256 Identities=12% Similarity=0.050 Sum_probs=183.1
Q ss_pred hCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhc--cCCceeeEE-------EEEe
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQI--RHRNIVKLY-------GFCL 239 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l--~h~niv~l~-------~~~~ 239 (468)
.+|.+.+.||+|+||.||+|.. .+++.||||++...........+.+.+|+++++.+ +||||++++ +++.
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~ 141 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA 141 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence 4588899999999999999975 47899999999987654445567788886555555 699988855 4443
Q ss_pred eC-----------------CEEEEEEEeccCCChhhhhhcCcccCCCCHHHH------HHHHHHHHHHHHHHHhcCCCCe
Q 012219 240 HR-----------------KCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKR------VNVVKGMCHALSYLHHDCTPPI 296 (468)
Q Consensus 240 ~~-----------------~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~------~~i~~~ia~~l~~LH~~~~~~i 296 (468)
.+ ...++||||++ |+|.+++...... +.+..+ +.++.||+.||+||| +.+|
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~--~~~~~~~~~~vk~~i~~qi~~aL~~LH---~~~i 215 (371)
T 3q60_A 142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFV--YVFRGDEGILALHILTAQLIRLAANLQ---SKGL 215 (371)
T ss_dssp ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHS--CCCCHHHHHHHHHHHHHHHHHHHHHHH---HTTE
T ss_pred cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccc--cchhhhhhhhhHHHHHHHHHHHHHHHH---HCCC
Confidence 32 34899999999 8999999864322 444555 778899999999999 7799
Q ss_pred EecCCCCCceeeCCCCCeEEeeccccccccCCCCCceeccccccccccccccC--CCCCccchhhHHHHHHHHHHhCCCC
Q 012219 297 VHRDISSNNVLLNSELEAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYT--MVVTEKCDVYSFGVVALEVLMGKHP 374 (468)
Q Consensus 297 vH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~~Dv~s~Gvil~el~tg~~p 374 (468)
+||||||+|||++.++.+||+|||+++.... ......+|+.|+|||++.+ ..++.++|||||||++|||+||+.|
T Consensus 216 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~P 292 (371)
T 3q60_A 216 VHGHFTPDNLFIMPDGRLMLGDVSALWKVGT---RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLP 292 (371)
T ss_dssp EETTCSGGGEEECTTSCEEECCGGGEEETTC---EEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCS
T ss_pred ccCcCCHHHEEECCCCCEEEEecceeeecCC---CccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999999986532 2224567799999999987 6799999999999999999999999
Q ss_pred CCcccccchhhhcccccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 012219 375 GELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSN 437 (468)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~ 437 (468)
|..........................+....... .+.+++.+||+.||++|||+.++++
T Consensus 293 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 293 FGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPD---FVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp TTBCCTTCTTCCCBCCTTSCCCCSCCCTTSSCCCH---HHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred CCCcCcccccchhhhhhhhccccccchhhccCCCH---HHHHHHHHHcCCChhhCCCHHHHhc
Confidence 97653221111110000011111111111011111 2677999999999999999999874
No 159
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=2.2e-42 Score=328.67 Aligned_cols=253 Identities=24% Similarity=0.344 Sum_probs=199.5
Q ss_pred CccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEE
Q 012219 171 DFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYE 249 (468)
Q Consensus 171 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 249 (468)
+|.....||+|+||.||+|.. .+++.||+|.+...... ..+.+.+|+.+++.++||||+++++++...+..++|||
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 99 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSR---YSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFME 99 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC------HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchH---HHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEE
Confidence 345556899999999999974 57889999999765432 34678899999999999999999999999999999999
Q ss_pred eccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCC-CCCeEEeeccccccccCC
Q 012219 250 YMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNS-ELEAFVADFGVARLLNFD 328 (468)
Q Consensus 250 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~-~~~~kl~Dfg~~~~~~~~ 328 (468)
|+++++|.+++........+++..+..++.|++.||.||| +.+|+||||||+||+++. ++.+||+|||+++.....
T Consensus 100 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~ 176 (295)
T 2clq_A 100 QVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGI 176 (295)
T ss_dssp CCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC-
T ss_pred eCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHH---hCCEEccCCChhhEEEECCCCCEEEeecccccccCCC
Confidence 9999999999987655556788999999999999999999 779999999999999987 899999999999876543
Q ss_pred CCCceeccccccccccccccCC--CCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchh
Q 012219 329 SSNRTLLAGTYGYIAPELAYTM--VVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQK 406 (468)
Q Consensus 329 ~~~~~~~~g~~~y~aPE~~~~~--~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (468)
........|++.|+|||++.+. .++.++||||||+++|||++|+.||............. ......+.+......
T Consensus 177 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~--~~~~~~~~~~~~~~~- 253 (295)
T 2clq_A 177 NPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKV--GMFKVHPEIPESMSA- 253 (295)
T ss_dssp ----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHH--HHHCCCCCCCTTSCH-
T ss_pred CCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhh--ccccccccccccCCH-
Confidence 3334455789999999998764 38899999999999999999999997543321111110 000111222222221
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 407 IRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 407 ~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
.+.+++.+||+.||++|||+.+++++
T Consensus 254 ------~~~~li~~~l~~dp~~Rps~~~ll~~ 279 (295)
T 2clq_A 254 ------EAKAFILKCFEPDPDKRACANDLLVD 279 (295)
T ss_dssp ------HHHHHHHHTTCSSTTTSCCHHHHHTS
T ss_pred ------HHHHHHHHHccCChhhCCCHHHHhcC
Confidence 26678999999999999999999853
No 160
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=9.6e-43 Score=328.90 Aligned_cols=255 Identities=25% Similarity=0.315 Sum_probs=200.3
Q ss_pred hhCccccceeeeeCCceEEEEEcCC----CCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARLPS----GKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCM 244 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 244 (468)
.++|.+.+.||+|+||.||+|...+ +..||+|.+...... ...+.|.+|++++++++||||+++++++.+. ..
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~ 87 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTL--DNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-PT 87 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCH--HHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-SC
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCc--hHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-CC
Confidence 4679999999999999999997432 346999999865432 2357789999999999999999999998754 46
Q ss_pred EEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccccc
Q 012219 245 FLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARL 324 (468)
Q Consensus 245 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~ 324 (468)
++||||+++++|.+++.... ..+++..++.++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 88 ~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 162 (281)
T 3cc6_A 88 WIIMELYPYGELGHYLERNK--NSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRY 162 (281)
T ss_dssp EEEEECCTTCBHHHHHHHHT--TTCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEEETTEEEECCCCGGGC
T ss_pred EEEEecCCCCCHHHHHHhcc--ccCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCccceEEECCCCcEEeCccCCCcc
Confidence 89999999999999997543 34889999999999999999999 77999999999999999999999999999987
Q ss_pred ccCCCC-CceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCCCCCCc
Q 012219 325 LNFDSS-NRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDPRLSPP 402 (468)
Q Consensus 325 ~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (468)
...... ......+++.|+|||++.+..++.++||||||+++|||+| |+.||........... ............
T Consensus 163 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~----~~~~~~~~~~~~ 238 (281)
T 3cc6_A 163 IEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGV----LEKGDRLPKPDL 238 (281)
T ss_dssp C---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHH----HHHTCCCCCCTT
T ss_pred cccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHH----HhcCCCCCCCCC
Confidence 643222 2233456789999999988899999999999999999998 9999975433221110 000000111111
Q ss_pred cchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhc
Q 012219 403 VDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIAR 442 (468)
Q Consensus 403 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~ 442 (468)
.+ + .+.+++.+||+.||++|||+.++++.|...
T Consensus 239 ~~----~---~l~~li~~~l~~~p~~Rps~~ell~~L~~~ 271 (281)
T 3cc6_A 239 CP----P---VLYTLMTRCWDYDPSDRPRFTELVCSLSDV 271 (281)
T ss_dssp CC----H---HHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CC----H---HHHHHHHHHccCCchhCcCHHHHHHHHHHH
Confidence 11 1 266799999999999999999999999875
No 161
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=4.5e-43 Score=338.46 Aligned_cols=257 Identities=24% Similarity=0.395 Sum_probs=198.0
Q ss_pred hCccccceeeeeCCceEEEEEc-CCCCE----EEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-PSGKV----VALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCM 244 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~----vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 244 (468)
++|.+.+.||+|+||.||+|.. .+++. ||+|.+...... ...+.+.+|+.++++++||||+++++++.... .
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~ 91 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSP--KANKEILDEAYVMASVDNPHVCRLLGICLTST-V 91 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSC--CCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-E
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCH--HHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-c
Confidence 5799999999999999999975 34443 577777644322 24567889999999999999999999998765 7
Q ss_pred EEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccccc
Q 012219 245 FLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARL 324 (468)
Q Consensus 245 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~ 324 (468)
++|+||+.+|+|.+++..... .+++..++.++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 92 ~~v~~~~~~g~L~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~ 166 (327)
T 3lzb_A 92 QLITQLMPFGCLLDYVREHKD--NIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 166 (327)
T ss_dssp EEEECCCSSCBHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTC---
T ss_pred eEEEEecCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHh---hCCCcCCCCCHHHEEEcCCCCEEEccCcceeE
Confidence 889999999999999976543 3899999999999999999999 77999999999999999999999999999987
Q ss_pred ccCCCC--CceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCCCCCC
Q 012219 325 LNFDSS--NRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDPRLSP 401 (468)
Q Consensus 325 ~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (468)
...... ......+++.|+|||++.+..++.++|||||||++|||++ |+.||............ ..........
T Consensus 167 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~----~~~~~~~~~~ 242 (327)
T 3lzb_A 167 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL----EKGERLPQPP 242 (327)
T ss_dssp -------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHH----HTTCCCCCCT
T ss_pred ccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH----HcCCCCCCCc
Confidence 643222 2223456778999999999999999999999999999999 99999765432221110 0000111111
Q ss_pred ccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCCC
Q 012219 402 PVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNKA 445 (468)
Q Consensus 402 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~~ 445 (468)
... . .+.+++.+||+.||++|||+.++++.|.+....
T Consensus 243 ~~~----~---~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 243 ICT----I---DVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp TBC----H---HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred cCC----H---HHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 111 1 266799999999999999999999999887654
No 162
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=5.5e-43 Score=338.22 Aligned_cols=263 Identities=21% Similarity=0.258 Sum_probs=192.3
Q ss_pred HhhCccccceeeeeCCceEEEEE-cCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEE
Q 012219 168 ATEDFHIKYCIGTGGYGSVYRAR-LPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFL 246 (468)
Q Consensus 168 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 246 (468)
..++|.+.+.||+|+||.||+|. ..+++.||||++....... ...+.+.+|++++++++||||+++++++...+..++
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 110 (329)
T 3gbz_A 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEE-GVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHL 110 (329)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC---------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEE
T ss_pred chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEccccccc-ccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEE
Confidence 35789999999999999999996 4578999999997654332 334567899999999999999999999999999999
Q ss_pred EEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeC-----CCCCeEEeeccc
Q 012219 247 IYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLN-----SELEAFVADFGV 321 (468)
Q Consensus 247 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~-----~~~~~kl~Dfg~ 321 (468)
||||++ |+|.+++..... +++..+..++.||+.||+||| +.+|+||||||+||+++ .++.+||+|||+
T Consensus 111 v~e~~~-~~L~~~~~~~~~---~~~~~~~~i~~ql~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~ 183 (329)
T 3gbz_A 111 IFEYAE-NDLKKYMDKNPD---VSMRVIKSFLYQLINGVNFCH---SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGL 183 (329)
T ss_dssp EEECCS-EEHHHHHHHCTT---CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEC-----CCEEEECCTTH
T ss_pred EEecCC-CCHHHHHhhcCC---CCHHHHHHHHHHHHHHHHHHH---hCCEECCCCCHHHEEEecCCCCccceEEECcCCC
Confidence 999998 499999976543 899999999999999999999 77999999999999994 455699999999
Q ss_pred cccccCCCCCceeccccccccccccccCC-CCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccc----------
Q 012219 322 ARLLNFDSSNRTLLAGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIK---------- 390 (468)
Q Consensus 322 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~---------- 390 (468)
++.............||+.|+|||++.+. .++.++|||||||++|||++|+.||...............
T Consensus 184 a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (329)
T 3gbz_A 184 ARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWP 263 (329)
T ss_dssp HHHHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTST
T ss_pred ccccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhh
Confidence 98876544445556789999999998874 5899999999999999999999999754322111000000
Q ss_pred -cccc--cCCCCCCccchhHHH-----HHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 391 -LIDL--LDPRLSPPVDQKIRQ-----DIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 391 -~~~~--~~~~~~~~~~~~~~~-----~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
.... ............... ....+.+++.+||+.||++|||++|++++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 319 (329)
T 3gbz_A 264 GVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEH 319 (329)
T ss_dssp TGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred hhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCC
Confidence 0000 000000000000000 11236789999999999999999999853
No 163
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=7.1e-43 Score=348.26 Aligned_cols=257 Identities=24% Similarity=0.300 Sum_probs=191.0
Q ss_pred HHhhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchh-----hhhhHHHHHHHHHHHhhccCCceeeEEEEEee
Q 012219 167 EATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETE-----ELASLESFGNEARLLSQIRHRNIVKLYGFCLH 240 (468)
Q Consensus 167 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-----~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 240 (468)
...++|.+.+.||+|+||.||+|.. .+++.||||++...... .......+.+|++++++++||||+++++++..
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~ 211 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 211 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence 3457899999999999999999965 56899999999764321 11122357899999999999999999999754
Q ss_pred CCEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCC---CCeEEe
Q 012219 241 RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSE---LEAFVA 317 (468)
Q Consensus 241 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~---~~~kl~ 317 (468)
+..++||||+++|+|.+++.... .+++.++..++.|++.||+||| +.+|+||||||+|||++.+ ..+||+
T Consensus 212 -~~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kl~ 284 (419)
T 3i6u_A 212 -EDYYIVLELMEGGELFDKVVGNK---RLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKIT 284 (419)
T ss_dssp -SEEEEEEECCTTCBGGGGTSSSC---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSSSCCEEEC
T ss_pred -CceEEEEEcCCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCCCcceEEEe
Confidence 55799999999999999887543 3899999999999999999999 7799999999999999754 459999
Q ss_pred eccccccccCCCCCceeccccccccccccccC---CCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccc
Q 012219 318 DFGVARLLNFDSSNRTLLAGTYGYIAPELAYT---MVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDL 394 (468)
Q Consensus 318 Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~---~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 394 (468)
|||+++.... ........||+.|+|||++.+ ..++.++|||||||++|||+||+.||.............
T Consensus 285 DFG~a~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i------ 357 (419)
T 3i6u_A 285 DFGHSKILGE-TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI------ 357 (419)
T ss_dssp CSSTTTSCC------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHH------
T ss_pred ecccceecCC-CccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHH------
Confidence 9999987653 223344679999999999853 578889999999999999999999997543221111100
Q ss_pred cCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 395 LDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
...... ............+.+++.+||+.||++|||+++++++
T Consensus 358 ~~~~~~-~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 358 TSGKYN-FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp HTTCCC-CCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred hcCCCC-CCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 000000 0001000111237789999999999999999999864
No 164
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=8.4e-43 Score=331.06 Aligned_cols=255 Identities=24% Similarity=0.338 Sum_probs=200.5
Q ss_pred hhCccccc-eeeeeCCceEEEEEc---CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEE
Q 012219 169 TEDFHIKY-CIGTGGYGSVYRARL---PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCM 244 (468)
Q Consensus 169 ~~~~~~~~-~lg~G~~g~Vy~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 244 (468)
.++|.+.+ .||+|+||.||+|.. .+++.||||++...... ....+.+.+|+++++.++||||+++++++ ..+..
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~ 92 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAND-PALKDELLAEANVMQQLDNPYIVRMIGIC-EAESW 92 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC------CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSE
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccC-HHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCc
Confidence 45788887 999999999999953 34788999999765432 23357799999999999999999999999 55678
Q ss_pred EEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccccc
Q 012219 245 FLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARL 324 (468)
Q Consensus 245 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~ 324 (468)
++||||+++++|.+++.... .+++..++.++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 93 ~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~ 166 (291)
T 1xbb_A 93 MLVMEMAELGPLNKYLQQNR---HVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKA 166 (291)
T ss_dssp EEEEECCTTEEHHHHHHHCT---TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred EEEEEeCCCCCHHHHHHhCc---CCCHHHHHHHHHHHHHHHHHHH---hCCeEcCCCCcceEEEeCCCcEEEccCCccee
Confidence 99999999999999998643 3899999999999999999999 77999999999999999999999999999987
Q ss_pred ccCCCCC---ceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCCCCC
Q 012219 325 LNFDSSN---RTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDPRLS 400 (468)
Q Consensus 325 ~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (468)
....... .....+++.|+|||.+.+..++.++||||||+++|||+| |+.||........... ......+...
T Consensus 167 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~----~~~~~~~~~~ 242 (291)
T 1xbb_A 167 LRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAM----LEKGERMGCP 242 (291)
T ss_dssp CCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHH----HHTTCCCCCC
T ss_pred eccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH----HHcCCCCCCC
Confidence 6533321 122345688999999988889999999999999999999 9999976443211110 0010111111
Q ss_pred CccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhc
Q 012219 401 PPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIAR 442 (468)
Q Consensus 401 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~ 442 (468)
...+ . .+.+++.+||+.||++|||+.++++.|+..
T Consensus 243 ~~~~----~---~l~~li~~~l~~dp~~Rps~~~l~~~L~~~ 277 (291)
T 1xbb_A 243 AGCP----R---EMYDLMNLCWTYDVENRPGFAAVELRLRNY 277 (291)
T ss_dssp TTCC----H---HHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred CCCC----H---HHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 1111 1 267799999999999999999999999765
No 165
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=3.8e-43 Score=339.68 Aligned_cols=263 Identities=25% Similarity=0.369 Sum_probs=198.2
Q ss_pred hhCccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLI 247 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 247 (468)
.++|.+.+.||+|+||.||+|... +++.||+|++....... ...+.+.+|++++++++||||+++++++...+..++|
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 102 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDK-MVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLV 102 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCH-HHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCch-HHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEE
Confidence 467999999999999999999764 58999999987654332 3346688999999999999999999999999999999
Q ss_pred EEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccC
Q 012219 248 YEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNF 327 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~ 327 (468)
|||+++++|.+++.... .+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 103 ~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 176 (331)
T 4aaa_A 103 FEFVDHTILDDLELFPN---GLDYQVVQKYLFQIINGIGFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAA 176 (331)
T ss_dssp EECCSEEHHHHHHHSTT---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCTTC-----
T ss_pred EecCCcchHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHH---HCCEEccCcChheEEEcCCCcEEEEeCCCceeecC
Confidence 99999999988876443 3899999999999999999999 77999999999999999999999999999987655
Q ss_pred CCCCceeccccccccccccccCC-CCCccchhhHHHHHHHHHHhCCCCCCcccccchhhh-----------------ccc
Q 012219 328 DSSNRTLLAGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLD-----------------KNI 389 (468)
Q Consensus 328 ~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~-----------------~~~ 389 (468)
.........|++.|+|||++.+. .++.++|||||||++|||++|+.||........... ...
T Consensus 177 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (331)
T 4aaa_A 177 PGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNP 256 (331)
T ss_dssp -------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCG
T ss_pred CccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhcc
Confidence 44444556789999999998775 789999999999999999999999975432211000 000
Q ss_pred ccccccCCCCCCc--cchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 390 KLIDLLDPRLSPP--VDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 390 ~~~~~~~~~~~~~--~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
.......+..... ...........+.+++.+||+.||++|||+.|++++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 257 VFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp GGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0000001111100 000000111237789999999999999999998853
No 166
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=1.5e-43 Score=363.56 Aligned_cols=258 Identities=25% Similarity=0.408 Sum_probs=207.3
Q ss_pred HhhCccccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEE
Q 012219 168 ATEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLI 247 (468)
Q Consensus 168 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 247 (468)
..++|.+.+.||+|+||.||+|.+.++..||||+++..... .+.|.+|++++++++|+||+++++++.+ +..++|
T Consensus 265 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv 339 (535)
T 2h8h_A 265 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 339 (535)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSSC----HHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEE
T ss_pred chhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCCC----HHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEe
Confidence 35678999999999999999999988889999999865432 3678999999999999999999999976 568999
Q ss_pred EEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccC
Q 012219 248 YEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNF 327 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~ 327 (468)
|||+++|+|.+++.... ...+++.+++.++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++....
T Consensus 340 ~e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 415 (535)
T 2h8h_A 340 TEYMSKGSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIED 415 (535)
T ss_dssp ECCCTTEEHHHHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCC
T ss_pred eehhcCCcHHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEEcCCCcEEEcccccceecCC
Confidence 99999999999997532 234889999999999999999999 77999999999999999999999999999987542
Q ss_pred CC-CCceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCCCCCCccch
Q 012219 328 DS-SNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQ 405 (468)
Q Consensus 328 ~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (468)
.. .......++..|+|||++....++.++|||||||++|||+| |+.||........... +.............
T Consensus 416 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~----i~~~~~~~~~~~~~- 490 (535)
T 2h8h_A 416 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ----VERGYRMPCPPECP- 490 (535)
T ss_dssp HHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHH----HHTTCCCCCCTTCC-
T ss_pred CceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH----HHcCCCCCCCCCCC-
Confidence 11 11122346788999999998899999999999999999999 9999976543211110 00101111111111
Q ss_pred hHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCCC
Q 012219 406 KIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNKA 445 (468)
Q Consensus 406 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~~ 445 (468)
+ .+.+++.+||+.||++|||+++|++.|+.....
T Consensus 491 ---~---~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~ 524 (535)
T 2h8h_A 491 ---E---SLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 524 (535)
T ss_dssp ---H---HHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCC
T ss_pred ---H---HHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhc
Confidence 1 267799999999999999999999999987554
No 167
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=1.5e-42 Score=349.78 Aligned_cols=259 Identities=23% Similarity=0.254 Sum_probs=193.5
Q ss_pred hhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeC------
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHR------ 241 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------ 241 (468)
.++|.+.+.||+|+||.||+|.. .+++.||||++...... ....+.+.+|+.+++.++||||+++++++...
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 139 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQN-QTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEF 139 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGS-HHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccC-hHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccC
Confidence 46799999999999999999964 56899999999765322 23456788999999999999999999999654
Q ss_pred CEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccc
Q 012219 242 KCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGV 321 (468)
Q Consensus 242 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~ 321 (468)
...++||||++++ +.+.+.. .+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+
T Consensus 140 ~~~~lv~E~~~~~-l~~~~~~-----~l~~~~~~~~~~qil~aL~~lH---~~~iiHrDlkp~NIll~~~~~~kl~DFG~ 210 (464)
T 3ttj_A 140 QDVYLVMELMDAN-LCQVIQM-----ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGL 210 (464)
T ss_dssp CEEEEEEECCSEE-HHHHHTS-----CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCC
T ss_pred CeEEEEEeCCCCC-HHHHHhh-----cCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChHhEEEeCCCCEEEEEEEe
Confidence 4679999999864 6666542 2889999999999999999999 77999999999999999999999999999
Q ss_pred cccccCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhh--------------c
Q 012219 322 ARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLD--------------K 387 (468)
Q Consensus 322 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~--------------~ 387 (468)
++.... ........||+.|+|||++.+..++.++||||+||++|||++|+.||........... .
T Consensus 211 a~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~ 289 (464)
T 3ttj_A 211 ARTAGT-SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 289 (464)
T ss_dssp C------CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTT
T ss_pred eeecCC-CcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHH
Confidence 987653 2334456799999999999999999999999999999999999999975432110000 0
Q ss_pred -ccccccccC---------------CCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 388 -NIKLIDLLD---------------PRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 388 -~~~~~~~~~---------------~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
.......+. ....+............+.+++.+||+.||++|||++|++++
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 290 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp SCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred cchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000000000 000000011111113347889999999999999999999854
No 168
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=1.1e-42 Score=334.38 Aligned_cols=266 Identities=22% Similarity=0.353 Sum_probs=203.2
Q ss_pred hhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEee----CCE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLH----RKC 243 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~ 243 (468)
.++|.+.+.||+|+||.||++.. .+++.||||++...... ..+.+.+|+++++.++||||+++++++.. ...
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQ---DREEAQREADMHRLFNHPNILRLVAYCLRERGAKHE 104 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHH---HHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHH---HHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCce
Confidence 36799999999999999999975 67999999998654432 35678899999999999999999999873 347
Q ss_pred EEEEEEeccCCChhhhhhcCc-ccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccc
Q 012219 244 MFLIYEYMEMGSLFCVLRTDE-EAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVA 322 (468)
Q Consensus 244 ~~lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~ 322 (468)
.++|+||+++|+|.+++.... ....+++.+++.++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++
T Consensus 105 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~ 181 (317)
T 2buj_A 105 AWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH---AKGYAHRDLKPTNILLGDEGQPVLMDLGSM 181 (317)
T ss_dssp EEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCSSC
T ss_pred eEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEcCCCCEEEEecCcc
Confidence 899999999999999987521 2345899999999999999999999 779999999999999999999999999998
Q ss_pred ccccCCCCC---------ceeccccccccccccccCCC---CCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccc
Q 012219 323 RLLNFDSSN---------RTLLAGTYGYIAPELAYTMV---VTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIK 390 (468)
Q Consensus 323 ~~~~~~~~~---------~~~~~g~~~y~aPE~~~~~~---~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~ 390 (468)
+........ .....|++.|+|||++.... ++.++||||||+++|||++|+.||.............
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~-- 259 (317)
T 2buj_A 182 NQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALA-- 259 (317)
T ss_dssp EESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHH--
T ss_pred hhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHH--
Confidence 764321111 11234689999999987543 7889999999999999999999986432111111000
Q ss_pred cccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCCCCCCC
Q 012219 391 LIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNKAPMQK 449 (468)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~~~~~~ 449 (468)
.............+ ..+.+++.+||+.||++|||+.++++.|.....+.+..
T Consensus 260 ~~~~~~~~~~~~~~-------~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~~~~ 311 (317)
T 2buj_A 260 VQNQLSIPQSPRHS-------SALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAPGQ 311 (317)
T ss_dssp HHCC--CCCCTTSC-------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCCCC-
T ss_pred hhccCCCCccccCC-------HHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCCCCC
Confidence 00000011111111 12678999999999999999999999999987654443
No 169
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=1.7e-42 Score=339.79 Aligned_cols=251 Identities=14% Similarity=0.184 Sum_probs=200.6
Q ss_pred hhCccccceeeeeCCceEEEEE------cCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhcc---CCceeeEEEEEe
Q 012219 169 TEDFHIKYCIGTGGYGSVYRAR------LPSGKVVALKKLHRSETEELASLESFGNEARLLSQIR---HRNIVKLYGFCL 239 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~------~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~ 239 (468)
.++|.+.+.||+|+||.||+|. ..+++.||||++..... ..+..|++++..++ |+||+++++++.
T Consensus 64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~------~~~~~e~~~~~~l~~~~~~~iv~~~~~~~ 137 (365)
T 3e7e_A 64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANP------WEFYIGTQLMERLKPSMQHMFMKFYSAHL 137 (365)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCCH------HHHHHHHHHHHHSCGGGGGGBCCEEEEEE
T ss_pred CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCCh------hHHHHHHHHHHHhhhhhhhhhhhhheeee
Confidence 4679999999999999999993 45789999999976543 35677888887776 999999999999
Q ss_pred eCCEEEEEEEeccCCChhhhhhcCc--ccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCC-------
Q 012219 240 HRKCMFLIYEYMEMGSLFCVLRTDE--EAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNS------- 310 (468)
Q Consensus 240 ~~~~~~lv~e~~~~gsL~~~l~~~~--~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~------- 310 (468)
..+..++||||+++|+|.+++.... ....+++..++.++.||+.||+||| +.+|+||||||+|||++.
T Consensus 138 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH---~~~ivHrDiKp~NIll~~~~~~~~~ 214 (365)
T 3e7e_A 138 FQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVH---DCEIIHGDIKPDNFILGNGFLEQDD 214 (365)
T ss_dssp CSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECGGGTCC--
T ss_pred cCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeecCCCCHHHEEecccccCccc
Confidence 9999999999999999999997522 2345999999999999999999999 789999999999999998
Q ss_pred ----CCCeEEeeccccccccC--CCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchh
Q 012219 311 ----ELEAFVADFGVARLLNF--DSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWS 384 (468)
Q Consensus 311 ----~~~~kl~Dfg~~~~~~~--~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~ 384 (468)
++.+||+|||+++.+.. .........||+.|+|||++.+..++.++|||||||++|||+||+.||.......+.
T Consensus 215 ~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~ 294 (365)
T 3e7e_A 215 EDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECK 294 (365)
T ss_dssp ----CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEEE
T ss_pred cccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCcee
Confidence 89999999999976542 222334467999999999999999999999999999999999999998643321111
Q ss_pred hhcccccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCC-CCHHHHHHHHHhcCC
Q 012219 385 LDKNIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSR-PTMQLVSNEFIARNK 444 (468)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~R-Ps~~~v~~~l~~~~~ 444 (468)
+...+...... + .+.+++..|++.+|.+| |+++++.+.|+....
T Consensus 295 ----------~~~~~~~~~~~---~---~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~ 339 (365)
T 3e7e_A 295 ----------PEGLFRRLPHL---D---MWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQ 339 (365)
T ss_dssp ----------ECSCCTTCSSH---H---HHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHH
T ss_pred ----------echhccccCcH---H---HHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHH
Confidence 11111111111 1 25568889999999998 677888877776543
No 170
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=5.7e-43 Score=332.01 Aligned_cols=260 Identities=24% Similarity=0.382 Sum_probs=195.1
Q ss_pred hCccccceeeeeCCceEEEEEc--CCCC--EEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL--PSGK--VVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMF 245 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~--~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 245 (468)
++|.+.+.||+|+||.||+|.+ .+++ .||+|+++..........+.+.+|++++++++||||+++++++.... .+
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~ 96 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MK 96 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CE
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ce
Confidence 5799999999999999999974 2333 68999997654443345678999999999999999999999998765 78
Q ss_pred EEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccc
Q 012219 246 LIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLL 325 (468)
Q Consensus 246 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~ 325 (468)
+|+||+++|+|.+++.... ..+++..++.++.|++.||.||| +.+++||||||+||+++.++.+||+|||+++..
T Consensus 97 ~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~ 171 (291)
T 1u46_A 97 MVTELAPLGSLLDRLRKHQ--GHFLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL 171 (291)
T ss_dssp EEEECCTTCBHHHHHHHHG--GGSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred eeEecccCCCHHHHHHhcc--CCcCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEEcCCCCEEEccccccccc
Confidence 9999999999999997643 23889999999999999999999 779999999999999999999999999999876
Q ss_pred cCCCCC---ceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCCCCCC
Q 012219 326 NFDSSN---RTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDPRLSP 401 (468)
Q Consensus 326 ~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (468)
...... .....++..|+|||++.+..++.++||||||+++|||++ |+.||.............. .........
T Consensus 172 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~---~~~~~~~~~ 248 (291)
T 1u46_A 172 PQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK---EGERLPRPE 248 (291)
T ss_dssp CC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHT---SCCCCCCCT
T ss_pred cccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHc---cCCCCCCCc
Confidence 533221 123457788999999988889999999999999999999 9999975543211110000 000011111
Q ss_pred ccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCCC
Q 012219 402 PVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNKA 445 (468)
Q Consensus 402 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~~ 445 (468)
..+ ..+.+++.+||+.||++|||+.++++.|.+..+.
T Consensus 249 ~~~-------~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 285 (291)
T 1u46_A 249 DCP-------QDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPT 285 (291)
T ss_dssp TCC-------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred CcC-------HHHHHHHHHHccCCcccCcCHHHHHHHHHHhCcc
Confidence 111 1267799999999999999999999999987543
No 171
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=1.6e-42 Score=334.75 Aligned_cols=266 Identities=22% Similarity=0.308 Sum_probs=205.7
Q ss_pred CcCHHHHHHHhhCcccc-ceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhcc-CCceeeEE
Q 012219 159 RITFQDMIEATEDFHIK-YCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIR-HRNIVKLY 235 (468)
Q Consensus 159 ~~~~~~~~~~~~~~~~~-~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~ 235 (468)
.+.++......++|.+. +.||+|+||.||+|.. .+++.||+|++....... .....+.+|+.++..++ ||||++++
T Consensus 17 n~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~~iv~~~ 95 (327)
T 3lm5_A 17 NLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQ-DCRAEILHEIAVLELAKSCPRVINLH 95 (327)
T ss_dssp CCCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTE-ECHHHHHHHHHHHHHTTTCTTBCCEE
T ss_pred hhHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcch-HHHHHHHHHHHHHHhccCCCCEEEEE
Confidence 34455556666778877 8899999999999975 468999999998654432 23567889999999995 69999999
Q ss_pred EEEeeCCEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCC---CC
Q 012219 236 GFCLHRKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNS---EL 312 (468)
Q Consensus 236 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~---~~ 312 (468)
+++...+..++||||+++|+|.+++.... ...+++.+++.++.|++.||+||| +.+|+||||||+||+++. ++
T Consensus 96 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~i~~ql~~~L~~LH---~~givH~Dikp~NIl~~~~~~~~ 171 (327)
T 3lm5_A 96 EVYENTSEIILILEYAAGGEIFSLCLPEL-AEMVSENDVIRLIKQILEGVYYLH---QNNIVHLDLKPQNILLSSIYPLG 171 (327)
T ss_dssp EEEECSSEEEEEEECCTTEEGGGGGSSCC--CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESCBTTBC
T ss_pred EEEEeCCeEEEEEEecCCCcHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCChHHEEEecCCCCC
Confidence 99999999999999999999999986532 234899999999999999999999 779999999999999998 78
Q ss_pred CeEEeeccccccccCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccc
Q 012219 313 EAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLI 392 (468)
Q Consensus 313 ~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~ 392 (468)
.+||+|||+++..... .......||+.|+|||++.+..++.++||||||+++|||++|+.||.................
T Consensus 172 ~~kL~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~ 250 (327)
T 3lm5_A 172 DIKIVDFGMSRKIGHA-CELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNV 250 (327)
T ss_dssp CEEECCGGGCEEC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC
T ss_pred cEEEeeCccccccCCc-cccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhccc
Confidence 9999999999876532 223345799999999999999999999999999999999999999975433211111000000
Q ss_pred cccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 393 DLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
.. ......... ..+.+++.+||+.||++|||+++++++
T Consensus 251 ~~-~~~~~~~~~-------~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 251 DY-SEETFSSVS-------QLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp CC-CTTTTTTSC-------HHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred cc-CchhhcccC-------HHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 00 011111111 126679999999999999999999865
No 172
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=1.9e-42 Score=327.21 Aligned_cols=251 Identities=25% Similarity=0.417 Sum_probs=203.4
Q ss_pred hhCccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEee-------
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLH------- 240 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~------- 240 (468)
..+|.+.+.||+|+||.||+|... +++.||+|++.... +.+.+|++++++++||||+++++++..
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (284)
T 2a19_B 10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-------EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPET 82 (284)
T ss_dssp HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS-------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---
T ss_pred ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc-------HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccc
Confidence 467999999999999999999765 79999999997654 245689999999999999999998854
Q ss_pred ---------CCEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCC
Q 012219 241 ---------RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSE 311 (468)
Q Consensus 241 ---------~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~ 311 (468)
....++||||+++|+|.+++.... ...+++..++.++.|++.||.||| +.+|+||||||+||+++.+
T Consensus 83 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~ 158 (284)
T 2a19_B 83 SSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR-GEKLDKVLALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDT 158 (284)
T ss_dssp ------CCEEEEEEEEECCCCSCBHHHHHHHGG-GSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEET
T ss_pred ccccccccCcceEEEEEeccCCCCHHHHHhhcc-CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCHHHEEEcCC
Confidence 445899999999999999997543 234899999999999999999999 7799999999999999999
Q ss_pred CCeEEeeccccccccCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhccccc
Q 012219 312 LEAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKL 391 (468)
Q Consensus 312 ~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~ 391 (468)
+.+||+|||+++...... ......|++.|+|||++.+..++.++||||||+++|||++|..|+........
T Consensus 159 ~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~-------- 229 (284)
T 2a19_B 159 KQVKIGDFGLVTSLKNDG-KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFT-------- 229 (284)
T ss_dssp TEEEECCCTTCEESSCCS-CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHHHHH--------
T ss_pred CCEEECcchhheeccccc-cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHHHHHH--------
Confidence 999999999998765332 23345689999999999999999999999999999999999998643211000
Q ss_pred ccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCCCCC
Q 012219 392 IDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNKAPM 447 (468)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~~~~ 447 (468)
...+.......+. .+.+++.+||+.||++|||+.++++.|....+.+.
T Consensus 230 -~~~~~~~~~~~~~-------~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~ 277 (284)
T 2a19_B 230 -DLRDGIISDIFDK-------KEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPE 277 (284)
T ss_dssp -HHHTTCCCTTSCH-------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC---
T ss_pred -HhhcccccccCCH-------HHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCC
Confidence 0111112222221 25678999999999999999999999998876544
No 173
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=6e-43 Score=355.85 Aligned_cols=253 Identities=24% Similarity=0.366 Sum_probs=203.4
Q ss_pred hhCccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLI 247 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 247 (468)
.++|.+.+.||+|+||.||+|... +++.||||++...........+.+.+|++++++++||||+++++++...+..++|
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 104 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV 104 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 357999999999999999999764 7899999999765433333457889999999999999999999999999999999
Q ss_pred EEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee---CCCCCeEEeecccccc
Q 012219 248 YEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLL---NSELEAFVADFGVARL 324 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll---~~~~~~kl~Dfg~~~~ 324 (468)
|||+.+|+|.+++.... .+++..+..++.||+.||.||| +.+|+||||||+||++ +.++.+||+|||+++.
T Consensus 105 ~e~~~~~~L~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 178 (484)
T 3nyv_A 105 GEVYTGGELFDEIISRK---RFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTH 178 (484)
T ss_dssp ECCCCSCBHHHHHHTCS---CCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHH
T ss_pred EecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEE
Confidence 99999999999987644 3899999999999999999999 7799999999999999 5678999999999987
Q ss_pred ccCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccc
Q 012219 325 LNFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVD 404 (468)
Q Consensus 325 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (468)
.... .......||+.|+|||++.+ .++.++||||+||++|+|++|+.||............ .. -......+..
T Consensus 179 ~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i----~~-~~~~~~~~~~ 251 (484)
T 3nyv_A 179 FEAS-KKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV----EK-GKYTFELPQW 251 (484)
T ss_dssp BCCC-CSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH----HH-CCCCCCSGGG
T ss_pred cccc-cccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHH----Hc-CCCCCCCccc
Confidence 6533 33444679999999999866 6899999999999999999999999754332111100 00 0001111111
Q ss_pred hhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 012219 405 QKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSN 437 (468)
Q Consensus 405 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~ 437 (468)
....+ .+.+++.+||+.||++|||+.++++
T Consensus 252 ~~~s~---~~~~li~~~L~~dp~~R~s~~e~l~ 281 (484)
T 3nyv_A 252 KKVSE---SAKDLIRKMLTYVPSMRISARDALD 281 (484)
T ss_dssp GGSCH---HHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ccCCH---HHHHHHHHHCCCChhHCcCHHHHhh
Confidence 11112 2667999999999999999999984
No 174
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=4.9e-42 Score=325.57 Aligned_cols=250 Identities=24% Similarity=0.372 Sum_probs=197.5
Q ss_pred hCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEee----CCEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLH----RKCM 244 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~ 244 (468)
..|.+.+.||+|+||.||+|.. .++..||+|++....... ...+.+.+|++++++++||||+++++++.. ....
T Consensus 26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 104 (290)
T 1t4h_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTK-SERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCI 104 (290)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCH-HHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEE
T ss_pred eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCH-HHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceE
Confidence 3477888999999999999975 568899999997654332 345778999999999999999999998875 4568
Q ss_pred EEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEecCCCCCceeeC-CCCCeEEeeccc
Q 012219 245 FLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPP--IVHRDISSNNVLLN-SELEAFVADFGV 321 (468)
Q Consensus 245 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~--ivH~dlk~~NIll~-~~~~~kl~Dfg~ 321 (468)
++||||+++|+|.+++.... .+++..++.++.|++.||.||| +.+ |+||||||+||+++ .++.+||+|||+
T Consensus 105 ~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~ 178 (290)
T 1t4h_A 105 VLVTELMTSGTLKTYLKRFK---VMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGL 178 (290)
T ss_dssp EEEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCSCCCGGGEEESSTTSCEEECCTTG
T ss_pred EEEEEecCCCCHHHHHHHcc---CCCHHHHHHHHHHHHHHHHHHH---cCCCCEEECCCCHHHEEEECCCCCEEEeeCCC
Confidence 99999999999999997643 3899999999999999999999 666 99999999999998 789999999999
Q ss_pred cccccCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCC
Q 012219 322 ARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSP 401 (468)
Q Consensus 322 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (468)
+.... ........|++.|+|||++. ..++.++||||||+++|+|++|+.||.............. . .....
T Consensus 179 ~~~~~--~~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~---~---~~~~~ 249 (290)
T 1t4h_A 179 ATLKR--ASFAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVT---S---GVKPA 249 (290)
T ss_dssp GGGCC--TTSBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHT---T---TCCCG
T ss_pred ccccc--ccccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHh---c---cCCcc
Confidence 97643 23344567999999999876 4589999999999999999999999975443222111100 0 00000
Q ss_pred ccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 402 PVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 402 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
...... ...+.+++.+||+.||++|||+++++++
T Consensus 250 ~~~~~~---~~~l~~li~~~l~~dp~~Rps~~ell~h 283 (290)
T 1t4h_A 250 SFDKVA---IPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp GGGGCC---CHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ccCCCC---CHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 011111 1127789999999999999999999864
No 175
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=8.1e-43 Score=338.07 Aligned_cols=261 Identities=23% Similarity=0.367 Sum_probs=193.4
Q ss_pred hhCccccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHH--HhhccCCceeeEEEEEee-----C
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARL--LSQIRHRNIVKLYGFCLH-----R 241 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~--l~~l~h~niv~l~~~~~~-----~ 241 (468)
.++|.+.+.||+|+||.||+|+. +++.||||++..... ..+..|.++ +..++||||+++++++.. .
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~------~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 84 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANR------QNFINEKNIYRVPLMEHDNIARFIVGDERVTADGR 84 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGGH------HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSC
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccch------hhHHHHHHHHHHHhccCcchhhheecccccccCCC
Confidence 46899999999999999999987 689999999975433 233444444 456899999999986542 3
Q ss_pred CEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCC---------CeEecCCCCCceeeCCCC
Q 012219 242 KCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTP---------PIVHRDISSNNVLLNSEL 312 (468)
Q Consensus 242 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~---------~ivH~dlk~~NIll~~~~ 312 (468)
...++||||+++|+|.+++.... .++..++.++.||+.||.||| +. +|+||||||+|||++.++
T Consensus 85 ~~~~lv~e~~~~g~L~~~l~~~~----~~~~~~~~i~~qi~~~L~~LH---~~~~~~~~~~~~ivH~Dikp~Nill~~~~ 157 (336)
T 3g2f_A 85 MEYLLVMEYYPNGSLXKYLSLHT----SDWVSSCRLAHSVTRGLAYLH---TELPRGDHYKPAISHRDLNSRNVLVKNDG 157 (336)
T ss_dssp EEEEEEECCCTTCBHHHHHHHCC----BCHHHHHHHHHHHHHHHHHHH---CCBCCGGGCBCCEECSSCSGGGEEECTTS
T ss_pred ceEEEEEecCCCCcHHHHHhhcc----cchhHHHHHHHHHHHHHHHHH---hhhccccccccceeecccccceEEEcCCC
Confidence 46789999999999999997543 588999999999999999999 66 999999999999999999
Q ss_pred CeEEeeccccccccCCC--------CCceeccccccccccccccC-------CCCCccchhhHHHHHHHHHHhCCCCCCc
Q 012219 313 EAFVADFGVARLLNFDS--------SNRTLLAGTYGYIAPELAYT-------MVVTEKCDVYSFGVVALEVLMGKHPGEL 377 (468)
Q Consensus 313 ~~kl~Dfg~~~~~~~~~--------~~~~~~~g~~~y~aPE~~~~-------~~~~~~~Dv~s~Gvil~el~tg~~p~~~ 377 (468)
.+||+|||+++.+.... .......||+.|+|||++.+ ..++.++|||||||++|||+||..|+..
T Consensus 158 ~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~ 237 (336)
T 3g2f_A 158 TCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFP 237 (336)
T ss_dssp CEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGST
T ss_pred cEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCC
Confidence 99999999998764321 11223469999999999876 4567899999999999999999777532
Q ss_pred ccccc-hhhh------c--------ccccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhc
Q 012219 378 LSSSS-WSLD------K--------NIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIAR 442 (468)
Q Consensus 378 ~~~~~-~~~~------~--------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~ 442 (468)
..... .... . .........+.+...... .......+.+++.+||+.||++|||++++++.|.+.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~l 316 (336)
T 3g2f_A 238 GESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKE-NSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAEL 316 (336)
T ss_dssp TSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCC-CSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred ccchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCccccc-ccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHH
Confidence 22110 0000 0 000001111122111111 012233488899999999999999999999999876
Q ss_pred CC
Q 012219 443 NK 444 (468)
Q Consensus 443 ~~ 444 (468)
..
T Consensus 317 l~ 318 (336)
T 3g2f_A 317 MM 318 (336)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 176
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=8.5e-43 Score=363.06 Aligned_cols=253 Identities=24% Similarity=0.336 Sum_probs=197.1
Q ss_pred Cccccc-eeeeeCCceEEEEEcC---CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEE
Q 012219 171 DFHIKY-CIGTGGYGSVYRARLP---SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFL 246 (468)
Q Consensus 171 ~~~~~~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 246 (468)
++.+.+ .||+|+||.||+|.+. ++..||||+++..... ...+.|.+|++++++++||||++++++|.. +..++
T Consensus 336 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~--~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~l 412 (613)
T 2ozo_A 336 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEK--ADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALML 412 (613)
T ss_dssp SEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSS--TTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEE
T ss_pred ceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCCh--HHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEE
Confidence 344444 7999999999999653 5667999999865322 245789999999999999999999999976 45899
Q ss_pred EEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccccccc
Q 012219 247 IYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLN 326 (468)
Q Consensus 247 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~ 326 (468)
||||+++|+|.+++.... ..+++..++.++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++...
T Consensus 413 v~E~~~~g~L~~~l~~~~--~~l~~~~~~~i~~qi~~~L~~LH---~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~ 487 (613)
T 2ozo_A 413 VMEMAGGGPLHKFLVGKR--EEIPVSNVAELLHQVSMGMKYLE---EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALG 487 (613)
T ss_dssp EEECCTTCBHHHHHTTCT--TTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC
T ss_pred EEEeCCCCcHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHH---HCCEEcCcCCHHHEEEcCCCcEEEeeccCccccc
Confidence 999999999999997543 34899999999999999999999 7799999999999999999999999999998764
Q ss_pred CCCCC---ceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCCCCCCc
Q 012219 327 FDSSN---RTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDPRLSPP 402 (468)
Q Consensus 327 ~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (468)
..... .....+++.|+|||++....++.++|||||||++|||+| |+.||........... +...........
T Consensus 488 ~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~----i~~~~~~~~p~~ 563 (613)
T 2ozo_A 488 ADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAF----IEQGKRMECPPE 563 (613)
T ss_dssp --------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHH----HHTTCCCCCCTT
T ss_pred CCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH----HHcCCCCCCCCc
Confidence 32221 122345688999999998999999999999999999998 9999986543221110 000001111111
Q ss_pred cchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhc
Q 012219 403 VDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIAR 442 (468)
Q Consensus 403 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~ 442 (468)
.+ ..+.+++.+||+.||++||++.+|++.|...
T Consensus 564 ~~-------~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~ 596 (613)
T 2ozo_A 564 CP-------PELYALMSDCWIYKWEDRPDFLTVEQRMRAC 596 (613)
T ss_dssp CC-------HHHHHHHHHTTCSSTTTSCCHHHHHHHHHHH
T ss_pred CC-------HHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 11 2277899999999999999999999888764
No 177
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=7.5e-43 Score=329.10 Aligned_cols=251 Identities=24% Similarity=0.372 Sum_probs=196.8
Q ss_pred hhCccccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeC-CEEEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHR-KCMFLI 247 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-~~~~lv 247 (468)
.++|.+.+.||+|+||.||+|.. .|+.||||++.... ..+.|.+|++++++++||||+++++++... +..++|
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv 93 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA-----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV 93 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC-------HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEE
T ss_pred hhhceEEeEEecCCCceEEEEEE-cCCEEEEEEecchh-----HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEE
Confidence 46799999999999999999987 48899999997654 236788999999999999999999997654 468999
Q ss_pred EEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccC
Q 012219 248 YEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNF 327 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~ 327 (468)
|||+++|+|.+++..... ..+++..++.++.|++.||.||| +.+++||||||+||+++.++.+||+|||+++....
T Consensus 94 ~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~ 169 (278)
T 1byg_A 94 TEYMAKGSLVDYLRSRGR-SVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 169 (278)
T ss_dssp ECCCTTEEHHHHHHHHHH-HHCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEEECCCCC------
T ss_pred EecCCCCCHHHHHHhccc-ccCCHHHHHHHHHHHHHHHHHHH---hCCccccCCCcceEEEeCCCcEEEeeccccccccc
Confidence 999999999999975432 23788999999999999999999 77999999999999999999999999999976542
Q ss_pred CCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCCCCCCccchh
Q 012219 328 DSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQK 406 (468)
Q Consensus 328 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (468)
. .....+++.|+|||.+.+..++.++||||||+++|||+| |+.||........... ......+......+
T Consensus 170 ~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~----~~~~~~~~~~~~~~-- 240 (278)
T 1byg_A 170 T---QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPR----VEKGYKMDAPDGCP-- 240 (278)
T ss_dssp ---------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHH----HTTTCCCCCCTTCC--
T ss_pred c---ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH----HhcCCCCCCcccCC--
Confidence 2 223457889999999998899999999999999999998 9999976543221111 00111111111111
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcC
Q 012219 407 IRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARN 443 (468)
Q Consensus 407 ~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~ 443 (468)
..+.+++.+||+.||++|||+.++++.|+.+.
T Consensus 241 -----~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~ 272 (278)
T 1byg_A 241 -----PAVYEVMKNCWHLDAAMRPSFLQLREQLEHIK 272 (278)
T ss_dssp -----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -----HHHHHHHHHHhcCChhhCCCHHHHHHHHHHHH
Confidence 12667999999999999999999999998764
No 178
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-42 Score=338.25 Aligned_cols=266 Identities=22% Similarity=0.251 Sum_probs=196.3
Q ss_pred HhhCccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhh--hhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEE
Q 012219 168 ATEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEEL--ASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCM 244 (468)
Q Consensus 168 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 244 (468)
..++|.+.+.||+|+||.||+|... +|+.||||++........ ...+.+.+|++++++++||||+++++++...+..
T Consensus 8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (346)
T 1ua2_A 8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNI 87 (346)
T ss_dssp -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCC
T ss_pred HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCce
Confidence 3578999999999999999999864 689999999975433211 1124678999999999999999999999999999
Q ss_pred EEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccccc
Q 012219 245 FLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARL 324 (468)
Q Consensus 245 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~ 324 (468)
++||||+++ +|.+++.... ..+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 88 ~lv~e~~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~ 161 (346)
T 1ua2_A 88 SLVFDFMET-DLEVIIKDNS--LVLTPSHIKAYMLMTLQGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAKS 161 (346)
T ss_dssp EEEEECCSE-EHHHHHTTCC--SSCCSSHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCCGGGST
T ss_pred EEEEEcCCC-CHHHHHHhcC--cCCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCCHHHEEEcCCCCEEEEeccccee
Confidence 999999986 8888886543 34788899999999999999999 77999999999999999999999999999987
Q ss_pred ccCCCCCceeccccccccccccccCC-CCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhccc-----------c--
Q 012219 325 LNFDSSNRTLLAGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNI-----------K-- 390 (468)
Q Consensus 325 ~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~-----------~-- 390 (468)
............||+.|+|||++.+. .++.++|||||||++|||++|.+||.............. .
T Consensus 162 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 241 (346)
T 1ua2_A 162 FGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMC 241 (346)
T ss_dssp TTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTT
T ss_pred ccCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhc
Confidence 75544445556789999999998754 588999999999999999999999875432111000000 0
Q ss_pred -cccccCCCCCCccc--hhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Q 012219 391 -LIDLLDPRLSPPVD--QKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEF 439 (468)
Q Consensus 391 -~~~~~~~~~~~~~~--~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l 439 (468)
..+.......+... .........+.+++.+||+.||++|||++|++++-
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~ 293 (346)
T 1ua2_A 242 SLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMK 293 (346)
T ss_dssp SSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSG
T ss_pred cCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcCh
Confidence 00000000000000 00001112377899999999999999999999653
No 179
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.7e-42 Score=331.10 Aligned_cols=252 Identities=27% Similarity=0.403 Sum_probs=199.7
Q ss_pred HhhCccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEE
Q 012219 168 ATEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFL 246 (468)
Q Consensus 168 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 246 (468)
..++|.+.+.||+|+||.||+|... +|+.||+|.+..... .+.+.+|++++.+++||||+++++++...+..++
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 101 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESD-----LQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWI 101 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTSC-----CHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchHH-----HHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEE
Confidence 3467999999999999999999764 689999999976432 3568899999999999999999999999999999
Q ss_pred EEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccccccc
Q 012219 247 IYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLN 326 (468)
Q Consensus 247 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~ 326 (468)
||||+++++|.+++.... ..+++..++.++.|++.||.||| +.+++|+||||+||+++.++.+||+|||++....
T Consensus 102 v~e~~~~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 176 (314)
T 3com_A 102 VMEYCGAGSVSDIIRLRN--KTLTEDEIATILQSTLKGLEYLH---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLT 176 (314)
T ss_dssp EEECCTTEEHHHHHHHHT--CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECB
T ss_pred EeecCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHH---hCCCcCCCcCHHHEEECCCCCEEEeecccchhhh
Confidence 999999999999986422 34899999999999999999999 7799999999999999999999999999998765
Q ss_pred CCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchh
Q 012219 327 FDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQK 406 (468)
Q Consensus 327 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (468)
..........|++.|+|||++.+..++.++||||||+++|+|++|+.||........... ......+.... ...
T Consensus 177 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~----~~~~~~~~~~~--~~~ 250 (314)
T 3com_A 177 DTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFM----IPTNPPPTFRK--PEL 250 (314)
T ss_dssp TTBSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH----HHHSCCCCCSS--GGG
T ss_pred hhccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHH----HhcCCCcccCC--ccc
Confidence 443444456789999999999999999999999999999999999999975433211110 00011111111 111
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 407 IRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 407 ~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
.. ..+.+++.+||+.||++|||+.+++++
T Consensus 251 ~~---~~l~~li~~~l~~dp~~Rpt~~~ll~~ 279 (314)
T 3com_A 251 WS---DNFTDFVKQCLVKSPEQRATATQLLQH 279 (314)
T ss_dssp SC---HHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred CC---HHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 11 126789999999999999999999853
No 180
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=1.6e-42 Score=334.79 Aligned_cols=259 Identities=25% Similarity=0.411 Sum_probs=202.7
Q ss_pred hCccccceeeeeCCceEEEEEcC-CCCE--EEEEEecCcchhhhhhHHHHHHHHHHHhhc-cCCceeeEEEEEeeCCEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLP-SGKV--VALKKLHRSETEELASLESFGNEARLLSQI-RHRNIVKLYGFCLHRKCMF 245 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~--vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 245 (468)
++|.+.+.||+|+||.||+|+.. ++.. +|+|.+...... ...+.+.+|++++.++ +||||+++++++...+..+
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~--~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 102 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASK--DDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY 102 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC--------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccch--HHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceE
Confidence 57999999999999999999754 4554 499988754332 2346788999999999 8999999999999999999
Q ss_pred EEEEeccCCChhhhhhcCc-------------ccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCC
Q 012219 246 LIYEYMEMGSLFCVLRTDE-------------EAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSEL 312 (468)
Q Consensus 246 lv~e~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~ 312 (468)
+||||+++|+|.+++.... ....+++.+++.++.||+.||.||| +.+|+||||||+||+++.++
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~ 179 (327)
T 1fvr_A 103 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENY 179 (327)
T ss_dssp EEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGG
T ss_pred EEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCccceEEEcCCC
Confidence 9999999999999997643 2345899999999999999999999 77999999999999999999
Q ss_pred CeEEeeccccccccCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhccccc
Q 012219 313 EAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKL 391 (468)
Q Consensus 313 ~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~ 391 (468)
.+||+|||+++..... .......+++.|+|||++.+..++.++||||||+++|||+| |+.||.......... ..
T Consensus 180 ~~kL~Dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~----~~ 254 (327)
T 1fvr_A 180 VAKIADFGLSRGQEVY-VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYE----KL 254 (327)
T ss_dssp CEEECCTTCEESSCEE-CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHH----HG
T ss_pred eEEEcccCcCcccccc-ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHH----Hh
Confidence 9999999999754321 12233456889999999988889999999999999999998 999997544321111 11
Q ss_pred ccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCCC
Q 012219 392 IDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNKA 445 (468)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~~ 445 (468)
............+ ..+.+++.+||+.||++|||+.++++.|.+....
T Consensus 255 ~~~~~~~~~~~~~-------~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 301 (327)
T 1fvr_A 255 PQGYRLEKPLNCD-------DEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE 301 (327)
T ss_dssp GGTCCCCCCTTBC-------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred hcCCCCCCCCCCC-------HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 1111111111111 1267799999999999999999999999876543
No 181
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=3.1e-42 Score=326.23 Aligned_cols=248 Identities=17% Similarity=0.261 Sum_probs=198.2
Q ss_pred hhCccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhc-cCCceeeEEEEEeeCCEEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQI-RHRNIVKLYGFCLHRKCMFL 246 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 246 (468)
.++|.+.+.||+|+||.||+|... +++.||+|++....... .....+.+|+..+..+ +||||+++++++.+.+..++
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~l 88 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGS-VDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLI 88 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTS-HHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEeccccccc-HHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence 467999999999999999999764 79999999998654332 2346788999999999 99999999999999999999
Q ss_pred EEEeccCCChhhhhhcCcc-cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCC---------------
Q 012219 247 IYEYMEMGSLFCVLRTDEE-AVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNS--------------- 310 (468)
Q Consensus 247 v~e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~--------------- 310 (468)
||||+++|+|.+++..... ...+++..++.++.||+.||+||| +.+|+||||||+||+++.
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~ 165 (289)
T 1x8b_A 89 QNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDD 165 (289)
T ss_dssp EEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEC----------------
T ss_pred EEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeecCCCHHHEEEcCCCCCccccccccccc
Confidence 9999999999999976432 234899999999999999999999 779999999999999984
Q ss_pred ----CCCeEEeeccccccccCCCCCceeccccccccccccccCC-CCCccchhhHHHHHHHHHHhCCCCCCcccccchhh
Q 012219 311 ----ELEAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSL 385 (468)
Q Consensus 311 ----~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~ 385 (468)
...+||+|||.+....... ...|++.|+|||++.+. .++.++|||||||++|||++|.+|+........
T Consensus 166 ~~~~~~~~kl~Dfg~~~~~~~~~----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~-- 239 (289)
T 1x8b_A 166 WASNKVMFKIGDLGHVTRISSPQ----VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWHE-- 239 (289)
T ss_dssp ----CCCEEECCCTTCEETTCSC----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHHHHH--
T ss_pred ccCCceEEEEcccccccccCCcc----ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhHHHH--
Confidence 4479999999998764322 23589999999998766 667899999999999999999987653321110
Q ss_pred hcccccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 386 DKNIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
......+.+....+. .+.+++.+||+.||++|||+.+++++
T Consensus 240 -----~~~~~~~~~~~~~~~-------~~~~li~~~l~~dp~~Rps~~~ll~h 280 (289)
T 1x8b_A 240 -----IRQGRLPRIPQVLSQ-------EFTELLKVMIHPDPERRPSAMALVKH 280 (289)
T ss_dssp -----HHTTCCCCCSSCCCH-------HHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred -----HHcCCCCCCCcccCH-------HHHHHHHHHhCCCcccCCCHHHHhhC
Confidence 011111122222221 26679999999999999999999854
No 182
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=1.7e-43 Score=348.32 Aligned_cols=245 Identities=16% Similarity=0.140 Sum_probs=189.2
Q ss_pred hhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHH---HHHhhccCCceeeEE-------EE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEA---RLLSQIRHRNIVKLY-------GF 237 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~---~~l~~l~h~niv~l~-------~~ 237 (468)
.++|.+.+.||+|+||.||+|.. .+|+.||||++...........+.|.+|+ +++++++||||++++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 46788999999999999999985 56999999999755433334567889999 555666899999998 66
Q ss_pred EeeCC-----------------EEEEEEEeccCCChhhhhhcCcc----cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCe
Q 012219 238 CLHRK-----------------CMFLIYEYMEMGSLFCVLRTDEE----AVGLDWAKRVNVVKGMCHALSYLHHDCTPPI 296 (468)
Q Consensus 238 ~~~~~-----------------~~~lv~e~~~~gsL~~~l~~~~~----~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~i 296 (468)
+..++ ..++||||+ +|+|.+++..... ...+++..++.++.||+.||+||| +.+|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHH---HTTE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHH---hCCe
Confidence 66543 278999999 6899999975422 112446888899999999999999 7799
Q ss_pred EecCCCCCceeeCCCCCeEEeeccccccccCCCCCceeccccccccccccccCC-----------CCCccchhhHHHHHH
Q 012219 297 VHRDISSNNVLLNSELEAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTM-----------VVTEKCDVYSFGVVA 365 (468)
Q Consensus 297 vH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-----------~~~~~~Dv~s~Gvil 365 (468)
+||||||+|||++.++.+||+|||+++... .......| +.|+|||++.+. .++.++|||||||++
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~---~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il 303 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDG---ARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVI 303 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETT---CEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecC---CcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHH
Confidence 999999999999999999999999998643 23344567 999999999887 899999999999999
Q ss_pred HHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 012219 366 LEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSN 437 (468)
Q Consensus 366 ~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~ 437 (468)
|||+||+.||........ ..... ... ...+. .+.+++.+||+.||++|||+.++++
T Consensus 304 ~elltg~~Pf~~~~~~~~-------~~~~~-~~~-~~~~~-------~~~~li~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 304 YWIWCADLPITKDAALGG-------SEWIF-RSC-KNIPQ-------PVRALLEGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp HHHHHSSCCC------CC-------SGGGG-SSC-CCCCH-------HHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred HHHHHCCCCCcccccccc-------hhhhh-hhc-cCCCH-------HHHHHHHHHcCCCchhCCCHHHHhh
Confidence 999999999865332111 00011 101 11111 2667999999999999999999985
No 183
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.4e-43 Score=342.97 Aligned_cols=259 Identities=19% Similarity=0.200 Sum_probs=202.3
Q ss_pred hCccccceeeeeCCceEEEEEcCC---------CCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceee-------
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLPS---------GKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVK------- 233 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~------- 233 (468)
++|.+.+.||+|+||.||+|.... ++.||+|++... +.+.+|++++++++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~--------~~~~~E~~~l~~l~h~niv~~~~~~~~ 113 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD--------GRLFNEQNFFQRAAKPLQVNKWKKLYS 113 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT--------STHHHHHHHHHHHCCHHHHHHHHHHTT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc--------chHHHHHHHHHHhcccchhhhhhhhcc
Confidence 579999999999999999998653 789999999754 24678999999999999987
Q ss_pred --------EEEEEee-CCEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCC
Q 012219 234 --------LYGFCLH-RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSN 304 (468)
Q Consensus 234 --------l~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~ 304 (468)
+++++.. ....++||||+ +++|.+++.... ...+++.+++.++.||+.||.||| +.+|+||||||+
T Consensus 114 ~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~ 188 (352)
T 2jii_A 114 TPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSP-KHVLSERSVLQVACRLLDALEFLH---ENEYVHGNVTAE 188 (352)
T ss_dssp CTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCGG
T ss_pred CCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCC-cCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHH
Confidence 6777776 77899999999 999999998652 234899999999999999999999 779999999999
Q ss_pred ceeeCCCC--CeEEeeccccccccCCCC-------CceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCC
Q 012219 305 NVLLNSEL--EAFVADFGVARLLNFDSS-------NRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPG 375 (468)
Q Consensus 305 NIll~~~~--~~kl~Dfg~~~~~~~~~~-------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~ 375 (468)
||+++.++ .+||+|||+++.+..... ......||+.|+|||++.+..++.++|||||||++|||+||+.||
T Consensus 189 NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf 268 (352)
T 2jii_A 189 NIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPW 268 (352)
T ss_dssp GEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTT
T ss_pred HEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCc
Confidence 99999998 899999999987643221 123347899999999999999999999999999999999999999
Q ss_pred Ccccccchhhhc-cc----ccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCCCCC
Q 012219 376 ELLSSSSWSLDK-NI----KLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNKAPM 447 (468)
Q Consensus 376 ~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~~~~ 447 (468)
............ .. ......+.... ..... ..+.+++.+||+.||++|||++++++.|.+......
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~---~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~ 339 (352)
T 2jii_A 269 TNCLPNTEDIMKQKQKFVDKPGPFVGPCGH---WIRPS---ETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLR 339 (352)
T ss_dssp GGGTTCHHHHHHHHHHHHHSCCCEECTTSC---EECCC---HHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred ccCCcCHHHHHHHHHhccCChhhhhhhccc---cCCCc---HHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcC
Confidence 865422111111 00 01111111100 00001 126779999999999999999999999988765443
No 184
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=2.9e-42 Score=328.51 Aligned_cols=263 Identities=24% Similarity=0.301 Sum_probs=199.4
Q ss_pred hCccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
++|.+.+.||+|+||.||+|+.. +++.||||++....... ...+.+.+|++++++++||||+++++++...+..++||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVF 81 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC---------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccch-hhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEE
Confidence 57899999999999999999764 78999999997654322 23457889999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||++ |+|.+++..... ..+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 82 e~~~-~~L~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~ 156 (299)
T 2r3i_A 82 EFLH-QDLKKFMDASAL-TGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 156 (299)
T ss_dssp ECCS-EEHHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCC
T ss_pred Eccc-CCHHHHHHhhhc-cCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHeEEcCCCCEEECcchhhhhccCC
Confidence 9998 699999876532 34889999999999999999999 779999999999999999999999999999876544
Q ss_pred CCCceeccccccccccccccCCC-CCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcc---cc--------ccc--c
Q 012219 329 SSNRTLLAGTYGYIAPELAYTMV-VTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKN---IK--------LID--L 394 (468)
Q Consensus 329 ~~~~~~~~g~~~y~aPE~~~~~~-~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~---~~--------~~~--~ 394 (468)
........+++.|+|||.+.+.. ++.++||||||+++|||+||+.||............. .. ... .
T Consensus 157 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (299)
T 2r3i_A 157 VRTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 236 (299)
T ss_dssp SBCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTT
T ss_pred ccccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCchhhhhHhhcCcc
Confidence 33344457899999999988765 7899999999999999999999997543221100000 00 000 0
Q ss_pred cCCCCCCccchhH----HHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 395 LDPRLSPPVDQKI----RQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 395 ~~~~~~~~~~~~~----~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
..+.......... ......+.+++.+||+.||++|||+.+++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~h 284 (299)
T 2r3i_A 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 284 (299)
T ss_dssp CCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 0011110000000 0011236789999999999999999999963
No 185
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=5.3e-42 Score=327.62 Aligned_cols=255 Identities=23% Similarity=0.342 Sum_probs=201.3
Q ss_pred hhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLI 247 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 247 (468)
.++|.+.+.||+|+||.||+++. .+|+.||+|++...... ..+.+.+|++++++++||||+++++++......++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAF---RDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLV 84 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC---------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEeccccc---chHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEE
Confidence 46799999999999999999975 47899999999865432 235688999999999999999999999999999999
Q ss_pred EEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee---CCCCCeEEeecccccc
Q 012219 248 YEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLL---NSELEAFVADFGVARL 324 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll---~~~~~~kl~Dfg~~~~ 324 (468)
|||+++++|.+++.... .+++..+..++.|++.||.||| +.+|+||||||+||++ +.++.+||+|||+++.
T Consensus 85 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~ 158 (304)
T 2jam_A 85 MQLVSGGELFDRILERG---VYTEKDASLVIQQVLSAVKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKM 158 (304)
T ss_dssp ECCCCSCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCC
T ss_pred EEcCCCccHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEecCCCCCCEEEccCCccee
Confidence 99999999999987543 3899999999999999999999 7799999999999999 7889999999999975
Q ss_pred ccCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccc
Q 012219 325 LNFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVD 404 (468)
Q Consensus 325 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (468)
... .......|++.|+|||++.+..++.++||||||+++|||++|+.||.................. .........+
T Consensus 159 ~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~-~~~~~~~~~~ 235 (304)
T 2jam_A 159 EQN--GIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYE-FESPFWDDIS 235 (304)
T ss_dssp CCC--BTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCCC-CCTTTTTTSC
T ss_pred cCC--CccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCC-CCccccccCC
Confidence 432 2233456899999999999999999999999999999999999999754322111000000000 0111111111
Q ss_pred hhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHH-HHHhc
Q 012219 405 QKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSN-EFIAR 442 (468)
Q Consensus 405 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~-~l~~~ 442 (468)
..+.+++.+||+.||++|||+.++++ .+...
T Consensus 236 -------~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~ 267 (304)
T 2jam_A 236 -------ESAKDFICHLLEKDPNERYTCEKALSHPWIDG 267 (304)
T ss_dssp -------HHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHS
T ss_pred -------HHHHHHHHHHcCCChhHCcCHHHHhcCccccC
Confidence 12677999999999999999999985 44443
No 186
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.9e-42 Score=335.28 Aligned_cols=257 Identities=21% Similarity=0.296 Sum_probs=187.9
Q ss_pred hCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhcc-CCceeeEEEEEe--------
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIR-HRNIVKLYGFCL-------- 239 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~-------- 239 (468)
.+|.+.+.||+|+||.||+|.. .+++.||+|++...... ..+.+.+|+.++.++. ||||+++++++.
T Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 104 (337)
T 3ll6_A 28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEE---KNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDT 104 (337)
T ss_dssp EEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHH---HHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTT
T ss_pred ceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchH---HHHHHHHHHHHHHHhccCCChhhcccccccccccccc
Confidence 5789999999999999999975 57899999998655433 3467889999999996 999999999984
Q ss_pred eCCEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEecCCCCCceeeCCCCCeEEe
Q 012219 240 HRKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPP--IVHRDISSNNVLLNSELEAFVA 317 (468)
Q Consensus 240 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~--ivH~dlk~~NIll~~~~~~kl~ 317 (468)
.....++|+||+. |+|.+++........+++..++.++.||+.||.||| +.+ |+||||||+||+++.++.+||+
T Consensus 105 ~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~~~ivH~Dikp~NIl~~~~~~~kl~ 180 (337)
T 3ll6_A 105 GQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMH---RQKPPIIHRDLKVENLLLSNQGTIKLC 180 (337)
T ss_dssp SSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCCCCCGGGCEECTTSCEEBC
T ss_pred CCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCEEEccCCcccEEECCCCCEEEe
Confidence 3456899999996 799998876444445999999999999999999999 667 9999999999999999999999
Q ss_pred eccccccccCCCCC------------ceeccccccccccccc---cCCCCCccchhhHHHHHHHHHHhCCCCCCcccccc
Q 012219 318 DFGVARLLNFDSSN------------RTLLAGTYGYIAPELA---YTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSS 382 (468)
Q Consensus 318 Dfg~~~~~~~~~~~------------~~~~~g~~~y~aPE~~---~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~ 382 (468)
|||+++........ .....||+.|+|||++ .+..++.++|||||||++|||+||+.||.......
T Consensus 181 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~ 260 (337)
T 3ll6_A 181 DFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR 260 (337)
T ss_dssp CCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-------
T ss_pred cCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHH
Confidence 99999876432211 1134589999999998 56678999999999999999999999997533211
Q ss_pred hhhhcccccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCCCCC
Q 012219 383 WSLDKNIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNKAPM 447 (468)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~~~~ 447 (468)
... ............. .+.+++.+||+.||++|||+.++++.|........
T Consensus 261 ~~~-------~~~~~~~~~~~~~-------~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~~ 311 (337)
T 3ll6_A 261 IVN-------GKYSIPPHDTQYT-------VFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARN 311 (337)
T ss_dssp ------------CCCCTTCCSSG-------GGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHTT
T ss_pred hhc-------CcccCCcccccch-------HHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccC
Confidence 110 0000011111111 15578999999999999999999999988765433
No 187
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=1.7e-42 Score=334.64 Aligned_cols=260 Identities=25% Similarity=0.347 Sum_probs=202.6
Q ss_pred hhCccccceeeeeCCceEEEEEc------CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCC
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL------PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRK 242 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 242 (468)
.++|.+.+.||+|+||.||+|+. .+++.||||++...... .....+.+|+.++++++||||+++++++....
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 106 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE--QDELDFLMEALIISKFNHQNIVRCIGVSLQSL 106 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCH--HHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccch--hhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCC
Confidence 36799999999999999999974 35778999999754433 23467889999999999999999999999998
Q ss_pred EEEEEEEeccCCChhhhhhcCcc----cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCC---CCCeE
Q 012219 243 CMFLIYEYMEMGSLFCVLRTDEE----AVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNS---ELEAF 315 (468)
Q Consensus 243 ~~~lv~e~~~~gsL~~~l~~~~~----~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~---~~~~k 315 (468)
..++||||+++|+|.+++..... ...+++.+++.++.|++.||.||| +.+|+||||||+||+++. +..+|
T Consensus 107 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~i~H~dlkp~NIli~~~~~~~~~k 183 (327)
T 2yfx_A 107 PRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAK 183 (327)
T ss_dssp SCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEE
T ss_pred CcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHh---hCCeecCcCCHhHEEEecCCCcceEE
Confidence 99999999999999999986532 234889999999999999999999 779999999999999984 45699
Q ss_pred EeeccccccccCCCC--CceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccc
Q 012219 316 VADFGVARLLNFDSS--NRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLI 392 (468)
Q Consensus 316 l~Dfg~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~ 392 (468)
|+|||+++....... ......+++.|+|||++.+..++.++||||||+++|||+| |+.||........... ..
T Consensus 184 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~----~~ 259 (327)
T 2yfx_A 184 IGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEF----VT 259 (327)
T ss_dssp ECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHH----HH
T ss_pred ECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHH----Hh
Confidence 999999986543221 2233467889999999988899999999999999999998 9999875432211100 00
Q ss_pred cccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCC
Q 012219 393 DLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNK 444 (468)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~ 444 (468)
....+....... . .+.+++.+||+.||++|||+.++++.|.....
T Consensus 260 ~~~~~~~~~~~~----~---~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~ 304 (327)
T 2yfx_A 260 SGGRMDPPKNCP----G---PVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 304 (327)
T ss_dssp TTCCCCCCTTCC----H---HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cCCCCCCCCCCC----H---HHHHHHHHHhcCChhhCcCHHHHHHHHHHHhc
Confidence 000111111111 1 26679999999999999999999999987653
No 188
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=3.1e-42 Score=351.15 Aligned_cols=253 Identities=25% Similarity=0.347 Sum_probs=195.8
Q ss_pred hhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLI 247 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 247 (468)
.++|.+.+.||+|+||.||+|+. .++..||+|++....... .....+.+|+++++.++||||+++++++......++|
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 114 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVST-SSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLV 114 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC------CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCc-hHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 35799999999999999999975 478999999998654332 2246788999999999999999999999999999999
Q ss_pred EEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCC---CCeEEeecccccc
Q 012219 248 YEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSE---LEAFVADFGVARL 324 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~---~~~kl~Dfg~~~~ 324 (468)
|||+++|+|.+.+.... .+++..+..++.||+.||.||| +.+|+||||||+||+++.+ +.+||+|||+++.
T Consensus 115 ~e~~~~g~L~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~ 188 (494)
T 3lij_A 115 MECYKGGELFDEIIHRM---KFNEVDAAVIIKQVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAV 188 (494)
T ss_dssp EECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred EecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChhhEEEeCCCCCCcEEEEECCCCeE
Confidence 99999999999886543 3899999999999999999999 7799999999999999764 5599999999987
Q ss_pred ccCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccc
Q 012219 325 LNFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVD 404 (468)
Q Consensus 325 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (468)
.... .......||+.|+|||++. ..++.++||||+||++|+|++|+.||................ .....+..
T Consensus 189 ~~~~-~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~-----~~~~~~~~ 261 (494)
T 3lij_A 189 FENQ-KKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGK-----YTFDSPEW 261 (494)
T ss_dssp CBTT-BCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC-----CCCCSGGG
T ss_pred CCCC-ccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC-----CCCCchhc
Confidence 6533 2334457999999999876 468999999999999999999999997544321111100000 01111111
Q ss_pred hhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 405 QKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 405 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
..... .+.+++.+||+.||++|||+.+++++
T Consensus 262 ~~~s~---~~~~li~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 262 KNVSE---GAKDLIKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp TTSCH---HHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred ccCCH---HHHHHHHHHCCCChhhCccHHHHhcC
Confidence 11111 26679999999999999999998843
No 189
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=1.5e-42 Score=362.04 Aligned_cols=248 Identities=24% Similarity=0.336 Sum_probs=195.4
Q ss_pred ceeeeeCCceEEEEEc---CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEEecc
Q 012219 176 YCIGTGGYGSVYRARL---PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYEYME 252 (468)
Q Consensus 176 ~~lg~G~~g~Vy~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 252 (468)
+.||+|+||.||+|.+ ..++.||||+++..... ....+.|.+|++++++++|||||+++++|..+ ..++||||++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~-~~~lv~E~~~ 452 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAND-PALKDELLAEANVMQQLDNPYIVRMIGICEAE-SWMLVMEMAE 452 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGC-GGGHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SEEEEEECCT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-CEEEEEEccC
Confidence 4799999999999954 35678999999765432 23457899999999999999999999999754 5789999999
Q ss_pred CCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCCC--
Q 012219 253 MGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDSS-- 330 (468)
Q Consensus 253 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~-- 330 (468)
+|+|.+++.... .+++..++.++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++.+.....
T Consensus 453 ~g~L~~~l~~~~---~l~~~~~~~i~~qi~~~L~yLH---~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 526 (635)
T 4fl3_A 453 LGPLNKYLQQNR---HVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 526 (635)
T ss_dssp TEEHHHHHHHCT---TCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-----
T ss_pred CCCHHHHHhhCC---CCCHHHHHHHHHHHHHHHHHHH---HCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccc
Confidence 999999997543 3899999999999999999999 77999999999999999999999999999987653322
Q ss_pred -CceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCCCCCCccchhHH
Q 012219 331 -NRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIR 408 (468)
Q Consensus 331 -~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (468)
......+|+.|+|||++....++.++|||||||++|||+| |+.||........... +............+
T Consensus 527 ~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~----i~~~~~~~~p~~~~---- 598 (635)
T 4fl3_A 527 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAM----LEKGERMGCPAGCP---- 598 (635)
T ss_dssp --------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHH----HHTTCCCCCCTTCC----
T ss_pred ccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH----HHcCCCCCCCCCCC----
Confidence 1223346788999999999999999999999999999998 9999976543211110 00111111111111
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhc
Q 012219 409 QDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIAR 442 (468)
Q Consensus 409 ~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~ 442 (468)
..+.+++.+||+.||++||++.+|++.|+..
T Consensus 599 ---~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~ 629 (635)
T 4fl3_A 599 ---REMYDLMNLCWTYDVENRPGFAAVELRLRNY 629 (635)
T ss_dssp ---HHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence 2267799999999999999999999999764
No 190
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=1.9e-42 Score=363.75 Aligned_cols=252 Identities=21% Similarity=0.312 Sum_probs=206.7
Q ss_pred HhhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhc-cCCceeeEEEEEeeCCEEE
Q 012219 168 ATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQI-RHRNIVKLYGFCLHRKCMF 245 (468)
Q Consensus 168 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 245 (468)
..++|.+.+.||+|+||.||+|+. .+++.||||+++..........+.+..|.+++..+ +||+|+++++++.+.+..+
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 356899999999999999999975 46889999999865443334556788999999987 7999999999999999999
Q ss_pred EEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccc
Q 012219 246 LIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLL 325 (468)
Q Consensus 246 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~ 325 (468)
+||||+++|+|.+++.... .+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++..
T Consensus 419 lV~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH---~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~ 492 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQVG---RFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKEN 492 (674)
T ss_dssp EEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHH---HTSEECCCCCSTTEEECSSSCEEECCCTTCEEC
T ss_pred EEEeCcCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---hCCeEeccCChhhEEEcCCCcEEEeecceeecc
Confidence 9999999999999998643 3899999999999999999999 779999999999999999999999999999875
Q ss_pred cCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccch
Q 012219 326 NFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQ 405 (468)
Q Consensus 326 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (468)
...........||+.|+|||++.+..++.++|||||||++|||++|+.||........... +.. -...++....
T Consensus 493 ~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~----i~~-~~~~~p~~~s- 566 (674)
T 3pfq_A 493 IWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQS----IME-HNVAYPKSMS- 566 (674)
T ss_dssp CCTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH----HHS-SCCCCCTTSC-
T ss_pred ccCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHH----HHh-CCCCCCccCC-
Confidence 4444555667899999999999999999999999999999999999999975432211110 000 0111222222
Q ss_pred hHHHHHHHHHHHHHhcccCCCCCCCCH-----HHHHH
Q 012219 406 KIRQDIILVSTVAFSCLRSQPKSRPTM-----QLVSN 437 (468)
Q Consensus 406 ~~~~~~~~l~~l~~~cl~~dP~~RPs~-----~~v~~ 437 (468)
. .+.+++.+||+.||++||++ ++|++
T Consensus 567 ---~---~~~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 567 ---K---EAVAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp ---H---HHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred ---H---HHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 1 26679999999999999997 77774
No 191
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=2.1e-42 Score=349.35 Aligned_cols=194 Identities=28% Similarity=0.424 Sum_probs=154.2
Q ss_pred hCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeC-----CE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHR-----KC 243 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~ 243 (468)
++|.+.+.||+|+||.||+|.. .+++.||||++...... ....+.+.+|+++++.++||||+++++++... ..
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFED-LIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSS-HHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcC-HHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 6799999999999999999975 47899999999754322 23457788999999999999999999999543 56
Q ss_pred EEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccc
Q 012219 244 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVAR 323 (468)
Q Consensus 244 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~ 323 (468)
.++||||+. |+|.+++.... .+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++
T Consensus 132 ~~lv~e~~~-~~L~~~~~~~~---~l~~~~~~~~~~qi~~aL~~LH---~~~iiHrDlKp~NILl~~~~~~kl~DFGla~ 204 (458)
T 3rp9_A 132 LYVVLEIAD-SDFKKLFRTPV---YLTELHIKTLLYNLLVGVKYVH---SAGILHRDLKPANCLVNQDCSVKVCDFGLAR 204 (458)
T ss_dssp EEEEECCCS-EEHHHHHHSSC---CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTTCB
T ss_pred EEEEEeccc-cchhhhcccCC---CCCHHHHHHHHHHHHHHHHHHH---hCCcCCCCCChhhEEECCCCCEeecccccch
Confidence 899999985 68999887543 3899999999999999999999 7799999999999999999999999999998
Q ss_pred cccCCCC---------------------------Cceeccccccccccccc-cCCCCCccchhhHHHHHHHHHHhC
Q 012219 324 LLNFDSS---------------------------NRTLLAGTYGYIAPELA-YTMVVTEKCDVYSFGVVALEVLMG 371 (468)
Q Consensus 324 ~~~~~~~---------------------------~~~~~~g~~~y~aPE~~-~~~~~~~~~Dv~s~Gvil~el~tg 371 (468)
....... .....+||+.|+|||++ ....++.++|||||||++|||+||
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 205 TVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp CTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred hccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 7643211 22345789999999976 566799999999999999999994
No 192
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=3.1e-42 Score=350.54 Aligned_cols=253 Identities=23% Similarity=0.351 Sum_probs=199.6
Q ss_pred hhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLI 247 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 247 (468)
.++|.+.+.||+|+||+||+|.. .+++.||||++....... .....+.+|++++++++||||+++++++......++|
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 99 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKN-KDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBC-SCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccc-hHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEE
Confidence 46799999999999999999975 478999999996543221 2356788999999999999999999999999999999
Q ss_pred EEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeC---CCCCeEEeecccccc
Q 012219 248 YEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLN---SELEAFVADFGVARL 324 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~---~~~~~kl~Dfg~~~~ 324 (468)
|||+++|+|.+.+.... .+++..+..++.||+.||.||| +.+|+||||||+||+++ .++.+||+|||+++.
T Consensus 100 ~e~~~~~~L~~~~~~~~---~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 173 (486)
T 3mwu_A 100 GELYTGGELFDEIIKRK---RFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTC 173 (486)
T ss_dssp ECCCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTT
T ss_pred EEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEEECCcCeE
Confidence 99999999999887543 3899999999999999999999 77999999999999995 456799999999987
Q ss_pred ccCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccc
Q 012219 325 LNFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVD 404 (468)
Q Consensus 325 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (468)
.... .......||+.|+|||++.+ .++.++||||+||++|+|++|+.||............ . . .......+..
T Consensus 174 ~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i--~--~-~~~~~~~~~~ 246 (486)
T 3mwu_A 174 FQQN-TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRV--E--T-GKYAFDLPQW 246 (486)
T ss_dssp BCCC-----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH--H--H-TCCCSCSGGG
T ss_pred CCCC-CccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH--H--h-CCCCCCCccc
Confidence 6432 23344579999999999875 5899999999999999999999999754322111100 0 0 0001111111
Q ss_pred hhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 405 QKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 405 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
..... .+.+++.+||+.||++|||+.+++++
T Consensus 247 ~~~s~---~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 247 RTISD---DAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp GGSCH---HHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred CCCCH---HHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 11112 26689999999999999999999864
No 193
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.2e-42 Score=335.29 Aligned_cols=254 Identities=26% Similarity=0.410 Sum_probs=195.4
Q ss_pred HHHhhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhc-cCCceeeEEEEEee---
Q 012219 166 IEATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQI-RHRNIVKLYGFCLH--- 240 (468)
Q Consensus 166 ~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~--- 240 (468)
....++|.+.+.||+|+||.||+|+. .+++.||+|++...... .+.+.+|++++.++ +||||+++++++..
T Consensus 20 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~----~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~ 95 (326)
T 2x7f_A 20 RDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE----EEEIKQEINMLKKYSHHRNIATYYGAFIKKNP 95 (326)
T ss_dssp CCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSST----THHHHHHHHHHHHHCCSTTBCCEEEEEEECC-
T ss_pred cCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCccc----HHHHHHHHHHHHhccCCCCeeeeeeEEeeccC
Confidence 33467899999999999999999975 57899999999765432 35788999999999 79999999999987
Q ss_pred ---CCEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEe
Q 012219 241 ---RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVA 317 (468)
Q Consensus 241 ---~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~ 317 (468)
....++||||+++|+|.+++.... ...+++..++.++.||+.||.||| +.+|+||||||+||+++.++.+||+
T Consensus 96 ~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~kl~ 171 (326)
T 2x7f_A 96 PGMDDQLWLVMEFCGAGSVTDLIKNTK-GNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLV 171 (326)
T ss_dssp -CCCCEEEEEEECCTTEEHHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEEC
T ss_pred ccccceEEEEEEcCCCCcHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCcHHHEEEcCCCCEEEe
Confidence 467899999999999999997653 234889999999999999999999 7799999999999999999999999
Q ss_pred eccccccccCCCCCceecccccccccccccc-----CCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccc
Q 012219 318 DFGVARLLNFDSSNRTLLAGTYGYIAPELAY-----TMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLI 392 (468)
Q Consensus 318 Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~ 392 (468)
|||++..............|++.|+|||++. ...++.++|||||||++|+|++|+.||........... ..
T Consensus 172 Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~----~~ 247 (326)
T 2x7f_A 172 DFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFL----IP 247 (326)
T ss_dssp CCTTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH----HH
T ss_pred eCcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHH----hh
Confidence 9999987654333344557899999999986 56788999999999999999999999975433211110 00
Q ss_pred cccCCCCC-CccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 393 DLLDPRLS-PPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 393 ~~~~~~~~-~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
....+... ...+ . .+.+++.+||..||++|||+.+++++
T Consensus 248 ~~~~~~~~~~~~~----~---~l~~li~~~l~~dp~~Rps~~~ll~h 287 (326)
T 2x7f_A 248 RNPAPRLKSKKWS----K---KFQSFIESCLVKNHSQRPATEQLMKH 287 (326)
T ss_dssp HSCCCCCSCSCSC----H---HHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred cCccccCCccccC----H---HHHHHHHHHhccChhhCCCHHHHhhC
Confidence 00111111 1111 1 26679999999999999999999863
No 194
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.5e-42 Score=334.86 Aligned_cols=263 Identities=27% Similarity=0.410 Sum_probs=203.6
Q ss_pred hCccccceeeeeCCceEEEEEc-----CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCC--
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-----PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRK-- 242 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-- 242 (468)
++|.+.+.||+|+||.||+++. .+++.||||++...... ..+.+.+|++++++++||||+++++++...+
T Consensus 41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 117 (326)
T 2w1i_A 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE---HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 117 (326)
T ss_dssp GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSH---HHHHHHHHHHHHHTCCCTTBCCEEEEECC----
T ss_pred HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHH---HHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCC
Confidence 5688999999999999999973 46889999999765432 3567899999999999999999999987654
Q ss_pred EEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccc
Q 012219 243 CMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVA 322 (468)
Q Consensus 243 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~ 322 (468)
..++||||+++++|.+++..... .+++.+++.++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++
T Consensus 118 ~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~kL~Dfg~~ 192 (326)
T 2w1i_A 118 NLKLIMEYLPYGSLRDYLQKHKE--RIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLT 192 (326)
T ss_dssp CCEEEECCCTTCBHHHHHHHSTT--SSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTC
T ss_pred ceEEEEECCCCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHH---hCCEeccCCCcceEEEcCCCcEEEecCcch
Confidence 67999999999999999976532 4899999999999999999999 779999999999999999999999999999
Q ss_pred ccccCCCCC---ceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhc--------cccc
Q 012219 323 RLLNFDSSN---RTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDK--------NIKL 391 (468)
Q Consensus 323 ~~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~--------~~~~ 391 (468)
+........ .....++..|+|||.+.+..++.++||||||+++|||+||+.|+............ ....
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (326)
T 2w1i_A 193 KVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 272 (326)
T ss_dssp EECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHH
T ss_pred hhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHH
Confidence 876543321 12235677899999999888999999999999999999999997643211000000 0001
Q ss_pred ccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcC
Q 012219 392 IDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARN 443 (468)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~ 443 (468)
.+.+......+...... ..+.+++.+||+.||++|||+.++++.|+.+.
T Consensus 273 ~~~~~~~~~~~~~~~~~---~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~ 321 (326)
T 2w1i_A 273 IELLKNNGRLPRPDGCP---DEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 321 (326)
T ss_dssp HHHHHTTCCCCCCTTCC---HHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHhhcCCCCCCCCccc---HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 11111111111111111 22778999999999999999999999998753
No 195
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=3.5e-42 Score=344.75 Aligned_cols=200 Identities=28% Similarity=0.396 Sum_probs=167.9
Q ss_pred hhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeC-----C
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHR-----K 242 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~ 242 (468)
.++|.+.+.||+|+||.||+|.. .+++.||||++...... ....+.+.+|++++++++||||+++++++... .
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 103 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFED-LIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFD 103 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTS-HHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcC-hHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCC
Confidence 36899999999999999999975 56889999999764332 23456788999999999999999999999765 5
Q ss_pred EEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccc
Q 012219 243 CMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVA 322 (468)
Q Consensus 243 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~ 322 (468)
..++||||++ |+|.+++.... .+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||++
T Consensus 104 ~~~lv~e~~~-~~L~~~~~~~~---~l~~~~~~~i~~qil~aL~~LH---~~givHrDlkp~NILl~~~~~~kL~DFGla 176 (432)
T 3n9x_A 104 ELYIVLEIAD-SDLKKLFKTPI---FLTEEHIKTILYNLLLGENFIH---ESGIIHRDLKPANCLLNQDCSVKVCDFGLA 176 (432)
T ss_dssp CEEEEEECCS-EEHHHHHHSSC---CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred eEEEEEecCC-cCHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHH---HCCCCCCCCCHHHeEECCCCCEEEccCCCc
Confidence 6899999996 59999997643 3899999999999999999999 779999999999999999999999999999
Q ss_pred ccccCCCC----------------------Cceeccccccccccccc-cCCCCCccchhhHHHHHHHHHHhCCCCCC
Q 012219 323 RLLNFDSS----------------------NRTLLAGTYGYIAPELA-YTMVVTEKCDVYSFGVVALEVLMGKHPGE 376 (468)
Q Consensus 323 ~~~~~~~~----------------------~~~~~~g~~~y~aPE~~-~~~~~~~~~Dv~s~Gvil~el~tg~~p~~ 376 (468)
+....... .....+||+.|+|||++ ....++.++||||+||++|||++|..||.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 177 RTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp EEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred ccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 87643221 12456789999999985 56679999999999999999999766654
No 196
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=1.2e-42 Score=340.24 Aligned_cols=199 Identities=28% Similarity=0.356 Sum_probs=174.7
Q ss_pred hCccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
++|.+.+.||+|+||.||+|... +++.||+|++...... ...+.+.+|++++++++||||+++++++...+..++||
T Consensus 33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 110 (360)
T 3eqc_A 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKP--AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM 110 (360)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCH--HHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCH--HHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEE
Confidence 57999999999999999999764 7899999999865432 24567899999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CeEecCCCCCceeeCCCCCeEEeeccccccccC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTP-PIVHRDISSNNVLLNSELEAFVADFGVARLLNF 327 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~-~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~ 327 (468)
||+++|+|.+++.... .+++..+..++.|++.||.||| +. +|+||||||+||+++.++.+||+|||+++....
T Consensus 111 e~~~~~~L~~~l~~~~---~~~~~~~~~i~~~i~~~l~~lh---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 184 (360)
T 3eqc_A 111 EHMDGGSLDQVLKKAG---RIPEQILGKVSIAVIKGLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 184 (360)
T ss_dssp CCCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHH---HHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHH
T ss_pred ECCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HhCCEEcCCccHHHEEECCCCCEEEEECCCCccccc
Confidence 9999999999997643 3899999999999999999999 53 899999999999999999999999999976532
Q ss_pred CCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcc
Q 012219 328 DSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELL 378 (468)
Q Consensus 328 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~ 378 (468)
. ......||+.|+|||++.+..++.++|||||||++|||+||+.||...
T Consensus 185 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 233 (360)
T 3eqc_A 185 S--MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPP 233 (360)
T ss_dssp H--C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCC
T ss_pred c--cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 2 223357899999999999999999999999999999999999999754
No 197
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.8e-42 Score=342.35 Aligned_cols=203 Identities=30% Similarity=0.428 Sum_probs=162.9
Q ss_pred HhhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhcc-CCceeeEEEEEeeCC--E
Q 012219 168 ATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIR-HRNIVKLYGFCLHRK--C 243 (468)
Q Consensus 168 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~--~ 243 (468)
..++|.+.+.||+|+||.||+|.. .+|+.||||++...... ....+.+.+|+.++..+. ||||+++++++...+ .
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~-~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~ 85 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQN-STDAQRTFREIMILTELSGHENIVNLLNVLRADNDRD 85 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CC-HHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSC
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccC-hHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCE
Confidence 457899999999999999999974 57899999998654322 233467789999999997 999999999997544 6
Q ss_pred EEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccc
Q 012219 244 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVAR 323 (468)
Q Consensus 244 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~ 323 (468)
.++||||++ |+|..++... .+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++
T Consensus 86 ~~lv~e~~~-~~L~~~~~~~----~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~ 157 (388)
T 3oz6_A 86 VYLVFDYME-TDLHAVIRAN----ILEPVHKQYVVYQLIKVIKYLH---SGGLLHRDMKPSNILLNAECHVKVADFGLSR 157 (388)
T ss_dssp EEEEEECCS-EEHHHHHHHT----CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred EEEEecccC-cCHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHeEEcCCCCEEecCCcccc
Confidence 899999997 5899888753 3889999999999999999999 7799999999999999999999999999998
Q ss_pred cccCC---------------------CCCceeccccccccccccccC-CCCCccchhhHHHHHHHHHHhCCCCCCccc
Q 012219 324 LLNFD---------------------SSNRTLLAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGKHPGELLS 379 (468)
Q Consensus 324 ~~~~~---------------------~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~ 379 (468)
..... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~ 235 (388)
T 3oz6_A 158 SFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSS 235 (388)
T ss_dssp ESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred cccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 65321 112233579999999999876 678999999999999999999999997543
No 198
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=2e-42 Score=332.41 Aligned_cols=259 Identities=20% Similarity=0.326 Sum_probs=193.5
Q ss_pred hCcccc-ceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhc-cCCceeeEEEEEeeCCEEEE
Q 012219 170 EDFHIK-YCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQI-RHRNIVKLYGFCLHRKCMFL 246 (468)
Q Consensus 170 ~~~~~~-~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 246 (468)
+.|.+. +.||+|+||.||+|.. .+++.||||++...... ..+.+.+|++++.++ +||||+++++++.+.+..++
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~l 88 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGH---IRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYL 88 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSC---CHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcch---hHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEE
Confidence 567774 7899999999999975 57899999999765422 346788999999985 79999999999999999999
Q ss_pred EEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCC---eEEeeccccc
Q 012219 247 IYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELE---AFVADFGVAR 323 (468)
Q Consensus 247 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~---~kl~Dfg~~~ 323 (468)
||||+++|+|.+++.... .+++..+..++.||+.||+||| +.+|+||||||+||+++.++. +||+|||+++
T Consensus 89 v~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~ 162 (316)
T 2ac3_A 89 VFEKMRGGSILSHIHKRR---HFNELEASVVVQDVASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGS 162 (316)
T ss_dssp EEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC
T ss_pred EEEcCCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEEccCCCcCceEEEEccCcc
Confidence 999999999999997643 3899999999999999999999 779999999999999998876 9999999997
Q ss_pred cccCCCC-------CceeccccccccccccccC-----CCCCccchhhHHHHHHHHHHhCCCCCCcccccc--hhhhc--
Q 012219 324 LLNFDSS-------NRTLLAGTYGYIAPELAYT-----MVVTEKCDVYSFGVVALEVLMGKHPGELLSSSS--WSLDK-- 387 (468)
Q Consensus 324 ~~~~~~~-------~~~~~~g~~~y~aPE~~~~-----~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~--~~~~~-- 387 (468)
....... ......||+.|+|||++.. ..++.++|||||||++|||++|+.||....... |....
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~ 242 (316)
T 2ac3_A 163 GIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEAC 242 (316)
T ss_dssp -------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CC
T ss_pred ccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccc
Confidence 6532211 1223458999999999875 568899999999999999999999997543211 00000
Q ss_pred ---cccc-ccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 388 ---NIKL-IDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 388 ---~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
.... ..+.......+. .........+.+++.+||+.||++|||+.+++++
T Consensus 243 ~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 243 PACQNMLFESIQEGKYEFPD-KDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp HHHHHHHHHHHHHCCCCCCH-HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred hhHHHHHHHHHhccCcccCc-hhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 0000 000011111110 0000011237789999999999999999999874
No 199
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=3.9e-42 Score=351.33 Aligned_cols=254 Identities=26% Similarity=0.342 Sum_probs=198.1
Q ss_pred hhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhh----------hhHHHHHHHHHHHhhccCCceeeEEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEEL----------ASLESFGNEARLLSQIRHRNIVKLYGF 237 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~----------~~~~~~~~e~~~l~~l~h~niv~l~~~ 237 (468)
.++|.+.+.||+|+||+||+|.. .+++.||+|++........ ...+.+.+|++++++++||||++++++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 46899999999999999999975 4688999999976543211 234678899999999999999999999
Q ss_pred EeeCCEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCC---Ce
Q 012219 238 CLHRKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSEL---EA 314 (468)
Q Consensus 238 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~---~~ 314 (468)
+.+....++||||+++|+|.+++.... .+++..+..++.||+.||.||| +.+|+||||||+||+++.++ .+
T Consensus 115 ~~~~~~~~lv~e~~~gg~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~ 188 (504)
T 3q5i_A 115 FEDKKYFYLVTEFYEGGELFEQIINRH---KFDECDAANIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLLNI 188 (504)
T ss_dssp EECSSEEEEEEECCTTCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESSTTCCSSE
T ss_pred EEcCCEEEEEEecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCcHHHEEEecCCCCccE
Confidence 999999999999999999999987543 3899999999999999999999 77999999999999998876 69
Q ss_pred EEeeccccccccCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccc
Q 012219 315 FVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDL 394 (468)
Q Consensus 315 kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 394 (468)
||+|||+++..... .......||+.|+|||++. ..++.++||||+||++|+|++|+.||............
T Consensus 189 kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i------- 259 (504)
T 3q5i_A 189 KIVDFGLSSFFSKD-YKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKV------- 259 (504)
T ss_dssp EECCCTTCEECCTT-SCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH-------
T ss_pred EEEECCCCEEcCCC-CccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH-------
Confidence 99999999876533 3334457999999999887 46899999999999999999999999754332111100
Q ss_pred cCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 395 LDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
......... .........+.+++.+||+.||.+|||+++++++
T Consensus 260 ~~~~~~~~~-~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 260 EKGKYYFDF-NDWKNISDEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp HHCCCCCCH-HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HcCCCCCCc-cccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 000010000 0000011236789999999999999999999843
No 200
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=4.2e-42 Score=335.12 Aligned_cols=263 Identities=22% Similarity=0.298 Sum_probs=198.2
Q ss_pred hhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEee-------
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLH------- 240 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~------- 240 (468)
.++|.+.+.||+|+||.||+|+. .+|+.||+|++....... .....+.+|+++++.++||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 94 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKE-GFPITALREIKILQLLKHENVVNLIEICRTKASPYNR 94 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSS-SSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccc-cchHHHHHHHHHHHhccCCCcccHhheeecccccccc
Confidence 36799999999999999999976 578999999997654332 223567799999999999999999999987
Q ss_pred -CCEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeec
Q 012219 241 -RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADF 319 (468)
Q Consensus 241 -~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Df 319 (468)
.+..++||||+++ +|.+.+..... .+++.++..++.||+.||+||| +.+|+||||||+||+++.++.+||+||
T Consensus 95 ~~~~~~lv~e~~~~-~l~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~kl~Df 168 (351)
T 3mi9_A 95 CKGSIYLVFDFCEH-DLAGLLSNVLV--KFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADF 168 (351)
T ss_dssp --CEEEEEEECCSE-EHHHHHHCTTS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCC
T ss_pred CCceEEEEEeccCC-CHHHHHhhccC--CCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCCEEEccc
Confidence 3468999999985 77777765432 3899999999999999999999 779999999999999999999999999
Q ss_pred cccccccCC----CCCceeccccccccccccccC-CCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccc
Q 012219 320 GVARLLNFD----SSNRTLLAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDL 394 (468)
Q Consensus 320 g~~~~~~~~----~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 394 (468)
|+++..... ........||+.|+|||++.+ ..++.++|||||||++|||+||+.||........... .......
T Consensus 169 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~-i~~~~~~ 247 (351)
T 3mi9_A 169 GLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLAL-ISQLCGS 247 (351)
T ss_dssp TTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH-HHHHHCC
T ss_pred hhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHH-HHHHhCC
Confidence 999876422 122234568999999998876 4689999999999999999999999975432111000 0000000
Q ss_pred cCCCC---------------CCccchhHHHHH------HHHHHHHHhcccCCCCCCCCHHHHHHHH
Q 012219 395 LDPRL---------------SPPVDQKIRQDI------ILVSTVAFSCLRSQPKSRPTMQLVSNEF 439 (468)
Q Consensus 395 ~~~~~---------------~~~~~~~~~~~~------~~l~~l~~~cl~~dP~~RPs~~~v~~~l 439 (468)
..+.. .........+.. ..+.+++.+||+.||++|||++|++++-
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp 313 (351)
T 3mi9_A 248 ITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHD 313 (351)
T ss_dssp CCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred CChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCC
Confidence 00000 000000011111 2377899999999999999999998543
No 201
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=1.1e-41 Score=324.37 Aligned_cols=254 Identities=24% Similarity=0.296 Sum_probs=201.7
Q ss_pred hhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcch------hhhhhHHHHHHHHHHHhhcc-CCceeeEEEEEee
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSET------EELASLESFGNEARLLSQIR-HRNIVKLYGFCLH 240 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~------~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~ 240 (468)
.++|.+.+.||+|+||.||+|.. .+++.||||++..... ......+.+.+|+++++++. ||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (298)
T 1phk_A 16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 95 (298)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence 46899999999999999999976 4689999999975431 11233467889999999996 9999999999999
Q ss_pred CCEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecc
Q 012219 241 RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFG 320 (468)
Q Consensus 241 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 320 (468)
.+..++||||+++++|.+++.... .+++..++.++.||+.||.||| +.+++||||||+||+++.++.+||+|||
T Consensus 96 ~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg 169 (298)
T 1phk_A 96 NTFFFLVFDLMKKGELFDYLTEKV---TLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFG 169 (298)
T ss_dssp SSEEEEEEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCT
T ss_pred CCeEEEEEeccCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEEcCCCcEEEeccc
Confidence 999999999999999999997543 4899999999999999999999 7799999999999999999999999999
Q ss_pred ccccccCCCCCceecccccccccccccc------CCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccc
Q 012219 321 VARLLNFDSSNRTLLAGTYGYIAPELAY------TMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDL 394 (468)
Q Consensus 321 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~------~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 394 (468)
++...... .......|++.|+|||++. ...++.++||||||+++|||++|+.||...............
T Consensus 170 ~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~---- 244 (298)
T 1phk_A 170 FSCQLDPG-EKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSG---- 244 (298)
T ss_dssp TCEECCTT-CCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT----
T ss_pred chhhcCCC-cccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcC----
Confidence 99876532 2334457899999999875 456889999999999999999999998754322111000000
Q ss_pred cCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 012219 395 LDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSN 437 (468)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~ 437 (468)
......+..... ...+.+++.+||+.||++|||+.++++
T Consensus 245 -~~~~~~~~~~~~---~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 245 -NYQFGSPEWDDY---SDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp -CCCCCTTTGGGS---CHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred -CcccCccccccc---CHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 001111111111 122678999999999999999999985
No 202
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=1.9e-42 Score=330.32 Aligned_cols=253 Identities=26% Similarity=0.375 Sum_probs=196.0
Q ss_pred hhCccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLI 247 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 247 (468)
.++|.+.+.||+|+||.||+|... +++.||+|++..... ...+.+.+|+++++.++||||+++++++...+..++|
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 94 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSE---EELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIM 94 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEE
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCH---HHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEE
Confidence 467999999999999999999764 689999999875533 2456788999999999999999999999999999999
Q ss_pred EEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccC
Q 012219 248 YEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNF 327 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~ 327 (468)
|||+++++|.+++.... ..+++..++.++.|++.||.||| +.+++||||||+||+++.++.+||+|||++.....
T Consensus 95 ~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 169 (302)
T 2j7t_A 95 IEFCPGGAVDAIMLELD--RGLTEPQIQVVCRQMLEALNFLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLK 169 (302)
T ss_dssp EECCTTEEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHH
T ss_pred EEeCCCCcHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHHHEEECCCCCEEEEECCCCccccc
Confidence 99999999999886532 23899999999999999999999 77999999999999999999999999999764322
Q ss_pred CCCCceeccccccccccccc-----cCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCc
Q 012219 328 DSSNRTLLAGTYGYIAPELA-----YTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPP 402 (468)
Q Consensus 328 ~~~~~~~~~g~~~y~aPE~~-----~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (468)
.........|++.|+|||++ ....++.++||||||+++|||++|+.||............ .....+....
T Consensus 170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~----~~~~~~~~~~- 244 (302)
T 2j7t_A 170 TLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKI----AKSDPPTLLT- 244 (302)
T ss_dssp HHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH----HHSCCCCCSS-
T ss_pred cccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHH----hccCCcccCC-
Confidence 21222335689999999988 3667889999999999999999999998764432111110 0000011110
Q ss_pred cchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 403 VDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 403 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
..... ..+.+++.+||+.||++|||+.+++++
T Consensus 245 -~~~~~---~~l~~li~~~l~~dp~~Rps~~~ll~h 276 (302)
T 2j7t_A 245 -PSKWS---VEFRDFLKIALDKNPETRPSAAQLLEH 276 (302)
T ss_dssp -GGGSC---HHHHHHHHHHSCSCTTTSCCHHHHTTS
T ss_pred -ccccC---HHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 11111 126779999999999999999999863
No 203
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=1.4e-41 Score=333.76 Aligned_cols=259 Identities=22% Similarity=0.238 Sum_probs=190.6
Q ss_pred hhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCC-----
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRK----- 242 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----- 242 (468)
.++|.+.+.||+|+||.||+|.. .+++.||||++...... ....+.+.+|+.+++.++||||+++++++....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 102 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQN-QTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 102 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSS-HHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCC-hHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccc
Confidence 36799999999999999999974 57899999999764322 234567889999999999999999999997654
Q ss_pred -EEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccc
Q 012219 243 -CMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGV 321 (468)
Q Consensus 243 -~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~ 321 (468)
..++||||+++ +|.+.+.. .+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+
T Consensus 103 ~~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 173 (371)
T 2xrw_A 103 QDVYIVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGL 173 (371)
T ss_dssp CEEEEEEECCSE-EHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCCCC
T ss_pred cceEEEEEcCCC-CHHHHHhh-----ccCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEEEeec
Confidence 78999999975 78887752 2889999999999999999999 77999999999999999999999999999
Q ss_pred cccccCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccc----ccc----
Q 012219 322 ARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIK----LID---- 393 (468)
Q Consensus 322 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~----~~~---- 393 (468)
++..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||............... ..+
T Consensus 174 a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 252 (371)
T 2xrw_A 174 ARTAGTS-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKK 252 (371)
T ss_dssp -----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTT
T ss_pred ccccccc-cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHH
Confidence 9876432 2233457899999999999999999999999999999999999999754321110000000 000
Q ss_pred -------c--cCCCC-------------CCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 394 -------L--LDPRL-------------SPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 394 -------~--~~~~~-------------~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
. ..+.. .+............+.+++.+||+.||++|||+++++++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 253 LQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp SCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred hhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 0 00000 000111111223457899999999999999999999854
No 204
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-42 Score=338.79 Aligned_cols=258 Identities=25% Similarity=0.372 Sum_probs=199.8
Q ss_pred hhCccccceeeeeCCceEEEEEc----CCCCEEEEEEecCcchh-hhhhHHHHHHHHHHHhhc-cCCceeeEEEEEeeCC
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL----PSGKVVALKKLHRSETE-ELASLESFGNEARLLSQI-RHRNIVKLYGFCLHRK 242 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~ 242 (468)
.++|.+.+.||+|+||.||+|+. .+++.||||+++..... .....+.+.+|++++.++ +||||+++++++....
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 36799999999999999999976 47899999998754321 111234566899999999 6999999999999999
Q ss_pred EEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccc
Q 012219 243 CMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVA 322 (468)
Q Consensus 243 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~ 322 (468)
..++||||+++|+|.+++.... .+++..+..++.||+.||.||| +.+|+||||||+|||++.++.+||+|||++
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a 206 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQRE---RFTEHEVQIYVGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLS 206 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEESCSSEE
T ss_pred eEEEEeecCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCcEEEeeCCCC
Confidence 9999999999999999997543 3899999999999999999999 779999999999999999999999999999
Q ss_pred ccccCCC-CCceeccccccccccccccC--CCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCC
Q 012219 323 RLLNFDS-SNRTLLAGTYGYIAPELAYT--MVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRL 399 (468)
Q Consensus 323 ~~~~~~~-~~~~~~~g~~~y~aPE~~~~--~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (468)
+...... .......||+.|+|||++.+ ..++.++|||||||++|||+||+.||.................. ..+..
T Consensus 207 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~ 285 (355)
T 1vzo_A 207 KEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILK-SEPPY 285 (355)
T ss_dssp EECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHH-CCCCC
T ss_pred eecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhc-cCCCC
Confidence 8653222 22234579999999999885 35789999999999999999999999743321111100000000 11222
Q ss_pred CCccchhHHHHHHHHHHHHHhcccCCCCCCC-----CHHHHHHHHH
Q 012219 400 SPPVDQKIRQDIILVSTVAFSCLRSQPKSRP-----TMQLVSNEFI 440 (468)
Q Consensus 400 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~~v~~~l~ 440 (468)
...... .+.+++.+||+.||++|| ++++++++..
T Consensus 286 ~~~~~~-------~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~ 324 (355)
T 1vzo_A 286 PQEMSA-------LAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLF 324 (355)
T ss_dssp CTTSCH-------HHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGG
T ss_pred CcccCH-------HHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcc
Confidence 222221 266799999999999999 9999987543
No 205
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=3.8e-42 Score=331.41 Aligned_cols=254 Identities=26% Similarity=0.316 Sum_probs=193.2
Q ss_pred hhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchh-----hhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCC
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETE-----ELASLESFGNEARLLSQIRHRNIVKLYGFCLHRK 242 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-----~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 242 (468)
.++|.+.+.||+|+||.||+|.. .+++.||||++...... .......+.+|++++++++||||+++++++....
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 88 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED 88 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence 46799999999999999999975 46889999999764321 1122345889999999999999999999987665
Q ss_pred EEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCC---eEEeec
Q 012219 243 CMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELE---AFVADF 319 (468)
Q Consensus 243 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~---~kl~Df 319 (468)
.++||||+++|+|.+++.... .+++..+..++.||+.||.||| +.+|+||||||+||+++.++. +||+||
T Consensus 89 -~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Df 161 (322)
T 2ycf_A 89 -YYIVLELMEGGELFDKVVGNK---RLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDF 161 (322)
T ss_dssp -EEEEEECCTTEETHHHHSTTC---CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSSSCCEEECCC
T ss_pred -eEEEEecCCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEecCCCCCeEEEccC
Confidence 899999999999999987543 4899999999999999999999 779999999999999987654 999999
Q ss_pred cccccccCCCCCceecccccccccccccc---CCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccC
Q 012219 320 GVARLLNFDSSNRTLLAGTYGYIAPELAY---TMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLD 396 (468)
Q Consensus 320 g~~~~~~~~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 396 (468)
|+++..... .......|++.|+|||++. ...++.++|||||||++|||++|+.||.............. .. .
T Consensus 162 g~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~---~~-~ 236 (322)
T 2ycf_A 162 GHSKILGET-SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQIT---SG-K 236 (322)
T ss_dssp TTCEECCCC-HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHH---HT-C
T ss_pred ccceecccc-cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHH---hC-c
Confidence 999876422 2223456899999999874 56788999999999999999999999975432211111000 00 0
Q ss_pred CCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 012219 397 PRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSN 437 (468)
Q Consensus 397 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~ 437 (468)
....+ .........+.+++.+||+.||++|||+.++++
T Consensus 237 ~~~~~---~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 237 YNFIP---EVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp CCCCH---HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cccCc---hhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 00000 000011123678999999999999999999885
No 206
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=6.3e-42 Score=345.55 Aligned_cols=260 Identities=18% Similarity=0.267 Sum_probs=202.0
Q ss_pred hCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccC-CceeeEEEEEeeCCEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRH-RNIVKLYGFCLHRKCMFLI 247 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~l~~~~~~~~~~~lv 247 (468)
++|.+.+.||+|+||.||+|.. .+++.||||++...... +.+.+|++++..++| +++..+..++...+..++|
T Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~-----~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lv 81 (483)
T 3sv0_A 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH-----PQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLV 81 (483)
T ss_dssp TTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS-----CCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEE
T ss_pred CcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc-----HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEE
Confidence 6799999999999999999974 67999999988755432 357789999999987 5666677777788889999
Q ss_pred EEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee---CCCCCeEEeecccccc
Q 012219 248 YEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLL---NSELEAFVADFGVARL 324 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll---~~~~~~kl~Dfg~~~~ 324 (468)
|||+ +++|.+++..... .+++..++.++.||+.||.||| +.+|+||||||+|||+ +.++.+||+|||+++.
T Consensus 82 me~~-g~sL~~ll~~~~~--~l~~~~~~~i~~qi~~aL~yLH---~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~ 155 (483)
T 3sv0_A 82 MDLL-GPSLEDLFNFCSR--KLSLKTVLMLADQMINRVEFVH---SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKK 155 (483)
T ss_dssp EECC-CCBHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEE
T ss_pred EECC-CCCHHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCEeecccCcceEEEecCCCCCeEEEEeCCccee
Confidence 9999 9999999975432 4899999999999999999999 7799999999999999 6889999999999987
Q ss_pred ccCCCCC-------ceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCC
Q 012219 325 LNFDSSN-------RTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDP 397 (468)
Q Consensus 325 ~~~~~~~-------~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 397 (468)
....... .....||+.|+|||++.+..++.++|||||||++|||++|+.||............ ..+.+ .
T Consensus 156 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~-~~i~~---~ 231 (483)
T 3sv0_A 156 YRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKY-EKISE---K 231 (483)
T ss_dssp CBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHH-HHHHH---H
T ss_pred ccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHH-HHHhh---c
Confidence 6543221 22457999999999999999999999999999999999999999865432111000 00000 0
Q ss_pred CCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCC
Q 012219 398 RLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNK 444 (468)
Q Consensus 398 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~ 444 (468)
................+.+++..||+.||++||++.+|++.|+....
T Consensus 232 ~~~~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~ 278 (483)
T 3sv0_A 232 KVATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFI 278 (483)
T ss_dssp HHHSCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHH
T ss_pred cccccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence 00000000000011237789999999999999999999998877643
No 207
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=2.9e-42 Score=335.77 Aligned_cols=263 Identities=21% Similarity=0.284 Sum_probs=202.5
Q ss_pred hhCccccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhh--------------HHHHHHHHHHHhhccCCceeeE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELAS--------------LESFGNEARLLSQIRHRNIVKL 234 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~--------------~~~~~~e~~~l~~l~h~niv~l 234 (468)
.++|.+.+.||+|+||.||+|.. +++.||+|++.......... .+.+.+|++++.+++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 36899999999999999999988 89999999997544322111 1678999999999999999999
Q ss_pred EEEEeeCCEEEEEEEeccCCChhhh------hhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCC-CCeEecCCCCCcee
Q 012219 235 YGFCLHRKCMFLIYEYMEMGSLFCV------LRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCT-PPIVHRDISSNNVL 307 (468)
Q Consensus 235 ~~~~~~~~~~~lv~e~~~~gsL~~~------l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~-~~ivH~dlk~~NIl 307 (468)
++++.+.+..++||||+++|+|.++ +... ....+++..++.++.|++.||.||| + .+|+||||||+||+
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dl~p~Nil 184 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKN-YTCFIPIQVIKCIIKSVLNSFSYIH---NEKNICHRDVKPSNIL 184 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSS-SCCCCCHHHHHHHHHHHHHHHHHHH---HTSCEECCCCCGGGEE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhc-cccCCCHHHHHHHHHHHHHHHHHHh---ccCCEeecCCChHhEE
Confidence 9999999999999999999999998 5432 1345899999999999999999999 5 79999999999999
Q ss_pred eCCCCCeEEeeccccccccCCCCCceeccccccccccccccCC-CCCc-cchhhHHHHHHHHHHhCCCCCCcccccchhh
Q 012219 308 LNSELEAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTM-VVTE-KCDVYSFGVVALEVLMGKHPGELLSSSSWSL 385 (468)
Q Consensus 308 l~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~-~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~ 385 (468)
++.++.+||+|||++...... ......|+..|+|||++.+. .++. ++||||||+++|||++|+.||..........
T Consensus 185 ~~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~ 262 (348)
T 2pml_X 185 MDKNGRVKLSDFGESEYMVDK--KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELF 262 (348)
T ss_dssp ECTTSCEEECCCTTCEECBTT--EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHH
T ss_pred EcCCCcEEEeccccccccccc--cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHH
Confidence 999999999999999876432 33445789999999999877 6666 9999999999999999999997654311111
Q ss_pred hccc-cccccc-------CCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 386 DKNI-KLIDLL-------DPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 386 ~~~~-~~~~~~-------~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
.... ...... .+................+.+++.+||+.||++|||+.+++++
T Consensus 263 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~h 323 (348)
T 2pml_X 263 NNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH 323 (348)
T ss_dssp HHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 1000 000000 0000000000000011237789999999999999999999864
No 208
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=2.9e-42 Score=337.77 Aligned_cols=270 Identities=22% Similarity=0.259 Sum_probs=197.7
Q ss_pred HHHHHHHhhCccccceeeeeCCceEEEEEcCCCCEEEEEEecCcchh--------hhhhHHHHHHHHHHHhhccCCceee
Q 012219 162 FQDMIEATEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETE--------ELASLESFGNEARLLSQIRHRNIVK 233 (468)
Q Consensus 162 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--------~~~~~~~~~~e~~~l~~l~h~niv~ 233 (468)
..++....++|.+.+.||+|+||.||+|...+|+.||||++...... .....+.+.+|++++++++||||++
T Consensus 14 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~ 93 (362)
T 3pg1_A 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILG 93 (362)
T ss_dssp HHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred HHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccc
Confidence 45677788999999999999999999999888999999998653321 1123467899999999999999999
Q ss_pred EEEEEee-----CCEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee
Q 012219 234 LYGFCLH-----RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLL 308 (468)
Q Consensus 234 l~~~~~~-----~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll 308 (468)
+++++.. ....++||||++ |+|.+.+.... ..+++..+..++.||+.||.||| +.+|+||||||+||++
T Consensus 94 ~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~ 167 (362)
T 3pg1_A 94 LRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQR--IVISPQHIQYFMYHILLGLHVLH---EAGVVHRDLHPGNILL 167 (362)
T ss_dssp CSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTT--SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEE
T ss_pred eeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHH---HCcCEecCCChHHEEE
Confidence 9999854 346899999998 68888887543 34899999999999999999999 7799999999999999
Q ss_pred CCCCCeEEeeccccccccCCCCCceeccccccccccccccC-CCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhc
Q 012219 309 NSELEAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDK 387 (468)
Q Consensus 309 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~ 387 (468)
+.++.+||+|||+++..... .......|++.|+|||++.+ ..++.++|||||||++|+|++|+.||............
T Consensus 168 ~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i 246 (362)
T 3pg1_A 168 ADNNDITICDFNLAREDTAD-ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKI 246 (362)
T ss_dssp CTTCCEEECCTTC----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred cCCCCEEEEecCcccccccc-cccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 99999999999999765422 23344578999999998876 67899999999999999999999999754321110000
Q ss_pred ----------------ccccccccCCCCC----CccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 388 ----------------NIKLIDLLDPRLS----PPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 388 ----------------~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
.....+.+..... .............+.+++.+||+.||++|||+.+++++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 247 VEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp HHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 0000000000000 00000000111237789999999999999999999954
No 209
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=1.5e-42 Score=330.93 Aligned_cols=258 Identities=24% Similarity=0.383 Sum_probs=184.5
Q ss_pred hhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLI 247 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 247 (468)
.++|.+.+.||+|+||.||+|.. .+++.||||++...... ...+.+.+|++++.+++||||+++++++...+..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (303)
T 2vwi_A 14 RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQ--TSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLV 91 (303)
T ss_dssp CCCCEEEEECC---CCCEEEEEC----CEEEEECCC------------------CCCCCCCTTBCCEEEEEESSSCEEEE
T ss_pred hhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcc--hhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEE
Confidence 46899999999999999999975 46899999998755432 2346788999999999999999999999999999999
Q ss_pred EEeccCCChhhhhhcC-----cccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccc
Q 012219 248 YEYMEMGSLFCVLRTD-----EEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVA 322 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~-----~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~ 322 (468)
|||+++++|.+++... .....+++..++.++.||+.||.||| +.+++||||||+||+++.++.+||+|||++
T Consensus 92 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~ 168 (303)
T 2vwi_A 92 MKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVS 168 (303)
T ss_dssp EECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEECCCHHH
T ss_pred ehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCCChhhEEEcCCCCEEEEeccch
Confidence 9999999999998641 12334899999999999999999999 779999999999999999999999999999
Q ss_pred ccccCCCC-----CceeccccccccccccccC-CCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhccccccc---
Q 012219 323 RLLNFDSS-----NRTLLAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLID--- 393 (468)
Q Consensus 323 ~~~~~~~~-----~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~--- 393 (468)
........ ......|++.|+|||++.+ ..++.++||||||+++|||++|+.||..................
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 248 (303)
T 2vwi_A 169 AFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLE 248 (303)
T ss_dssp HHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTT
T ss_pred heeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCccc
Confidence 77643211 1233568999999999876 56899999999999999999999999765432221110000000
Q ss_pred --ccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 394 --LLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 394 --~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
..++....... ..+.+++.+||+.||++|||+.+++++
T Consensus 249 ~~~~~~~~~~~~~-------~~~~~li~~~l~~dp~~Rps~~~ll~h 288 (303)
T 2vwi_A 249 TGVQDKEMLKKYG-------KSFRKMISLCLQKDPEKRPTAAELLRH 288 (303)
T ss_dssp C-----CCCCCCC-------HHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred cccccchhhhhhh-------HHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 00111111111 126679999999999999999999863
No 210
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=3.6e-41 Score=321.88 Aligned_cols=257 Identities=20% Similarity=0.274 Sum_probs=197.9
Q ss_pred hhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhh-hhhHHHHHHHHHHHhhccCCceeeEEEEEe--eCCEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEE-LASLESFGNEARLLSQIRHRNIVKLYGFCL--HRKCM 244 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~--~~~~~ 244 (468)
.++|.+.+.||+|+||.||++.. .+++.||+|++....... ....+.+.+|++++++++||||+++++++. .....
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 46899999999999999999986 468899999997654322 234567899999999999999999999984 45578
Q ss_pred EEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccccc
Q 012219 245 FLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARL 324 (468)
Q Consensus 245 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~ 324 (468)
++||||++++ |.+++.... ...+++..++.++.||+.||.||| +.+|+||||||+||+++.++.+||+|||++..
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH---~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~ 158 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVP-EKRFPVCQAHGYFCQLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEA 158 (305)
T ss_dssp EEEEECCSEE-HHHHHHHST-TCSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEehhccCC-HHHHHHhCc-ccccCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCcccEEEcCCCcEEeeccccccc
Confidence 9999999876 777776543 234899999999999999999999 77999999999999999999999999999987
Q ss_pred ccCCC--CCceeccccccccccccccCCC--CCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCC
Q 012219 325 LNFDS--SNRTLLAGTYGYIAPELAYTMV--VTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLS 400 (468)
Q Consensus 325 ~~~~~--~~~~~~~g~~~y~aPE~~~~~~--~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (468)
..... .......|++.|+|||++.+.. ++.++||||||+++|||++|+.||........... +.. ......
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~----i~~-~~~~~~ 233 (305)
T 2wtk_C 159 LHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFEN----IGK-GSYAIP 233 (305)
T ss_dssp CCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH----HHH-CCCCCC
T ss_pred cCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHH----Hhc-CCCCCC
Confidence 64322 2223456899999999987643 47899999999999999999999975432111100 000 011112
Q ss_pred CccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH-HHhc
Q 012219 401 PPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE-FIAR 442 (468)
Q Consensus 401 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~-l~~~ 442 (468)
..... .+.+++.+||+.||++|||+++++++ +.+.
T Consensus 234 ~~~~~-------~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~ 269 (305)
T 2wtk_C 234 GDCGP-------PLSDLLKGMLEYEPAKRFSIRQIRQHSWFRK 269 (305)
T ss_dssp SSSCH-------HHHHHHHHHTCSSTTTSCCHHHHHHSHHHHS
T ss_pred CccCH-------HHHHHHHHHccCChhhCCCHHHHhcCccccc
Confidence 21221 26679999999999999999999964 4443
No 211
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.8e-42 Score=335.78 Aligned_cols=258 Identities=24% Similarity=0.270 Sum_probs=192.4
Q ss_pred hhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCC-----
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRK----- 242 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----- 242 (468)
.++|.+.+.||+|+||.||+|.. .+|+.||||++...... ....+.+.+|+++++.++||||+++++++....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 102 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQS-ELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF 102 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSS-HHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccC-HHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccC
Confidence 36799999999999999999975 57999999999654332 234567889999999999999999999997653
Q ss_pred -EEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccc
Q 012219 243 -CMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGV 321 (468)
Q Consensus 243 -~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~ 321 (468)
..++||||+ +++|.+++... .+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+
T Consensus 103 ~~~~lv~e~~-~~~L~~~~~~~----~l~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 174 (367)
T 1cm8_A 103 TDFYLVMPFM-GTDLGKLMKHE----KLGEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGL 174 (367)
T ss_dssp CCCEEEEECC-SEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred ceEEEEEecC-CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCHHHEEEcCCCCEEEEeeec
Confidence 469999999 78999998752 3889999999999999999999 77999999999999999999999999999
Q ss_pred cccccCCCCCceeccccccccccccccC-CCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhc----cc-------
Q 012219 322 ARLLNFDSSNRTLLAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDK----NI------- 389 (468)
Q Consensus 322 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~----~~------- 389 (468)
++.... ......+|+.|+|||++.+ ..++.++||||+||++|||++|+.||............ ..
T Consensus 175 a~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~ 251 (367)
T 1cm8_A 175 ARQADS---EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQ 251 (367)
T ss_dssp CEECCS---SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHH
T ss_pred cccccc---ccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHH
Confidence 987542 2334578999999999877 67999999999999999999999999754321110000 00
Q ss_pred --------ccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 390 --------KLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 390 --------~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
.....+..................+.+++.+||+.||++|||+++++++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h 308 (367)
T 1cm8_A 252 RLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 308 (367)
T ss_dssp TCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence 0000000000000000000111236789999999999999999999864
No 212
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=5.5e-42 Score=325.05 Aligned_cols=253 Identities=22% Similarity=0.360 Sum_probs=185.5
Q ss_pred hhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLI 247 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 247 (468)
.++|++.+.||+|+||.||+|.. .+++.||+|++....... ...+.+.++...++.++||||+++++++...+..++|
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv 84 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQ-EQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 84 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHH-HHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcH-HHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEE
Confidence 46799999999999999999975 578999999997654332 2334455566668889999999999999999999999
Q ss_pred EEeccCCChhhhhhcC-cccCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CeEecCCCCCceeeCCCCCeEEeeccccccc
Q 012219 248 YEYMEMGSLFCVLRTD-EEAVGLDWAKRVNVVKGMCHALSYLHHDCTP-PIVHRDISSNNVLLNSELEAFVADFGVARLL 325 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~-~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~ 325 (468)
|||++ |+|.+++... .....+++..++.++.|++.||+||| +. +|+||||||+||+++.++.+||+|||+++..
T Consensus 85 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 160 (290)
T 3fme_A 85 MELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYL 160 (290)
T ss_dssp EECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HHSCCCCCCCSGGGCEECTTCCEEBCCC------
T ss_pred Eehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeecCCcccc
Confidence 99997 5887777542 12345899999999999999999999 65 9999999999999999999999999999876
Q ss_pred cCCCCCceeccccccccccccc----cCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCC
Q 012219 326 NFDSSNRTLLAGTYGYIAPELA----YTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSP 401 (468)
Q Consensus 326 ~~~~~~~~~~~g~~~y~aPE~~----~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (468)
... .......||+.|+|||++ ....++.++||||||+++|||+||+.||............. .....+....
T Consensus 161 ~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~---~~~~~~~~~~ 236 (290)
T 3fme_A 161 VDD-VAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQV---VEEPSPQLPA 236 (290)
T ss_dssp ----------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHH---HHSCCCCCCT
T ss_pred ccc-ccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHH---hccCCCCccc
Confidence 432 223334689999999996 56678999999999999999999999997533221111110 0111111111
Q ss_pred -ccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 012219 402 -PVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSN 437 (468)
Q Consensus 402 -~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~ 437 (468)
..+ . .+.+++.+||+.||++|||+.++++
T Consensus 237 ~~~~----~---~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 237 DKFS----A---EFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp TTSC----H---HHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred ccCC----H---HHHHHHHHHhhcChhhCcCHHHHHh
Confidence 111 1 2677999999999999999999985
No 213
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=4e-41 Score=325.30 Aligned_cols=250 Identities=20% Similarity=0.263 Sum_probs=196.0
Q ss_pred hCccccceeeeeCCceEEEEE-cCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhcc-CCceeeEEEEEee--CCEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRAR-LPSGKVVALKKLHRSETEELASLESFGNEARLLSQIR-HRNIVKLYGFCLH--RKCMF 245 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~--~~~~~ 245 (468)
++|.+.+.||+|+||.||+|. ..+++.||||++.... .+.+.+|++++++++ ||||+++++++.. ....+
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~ 109 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK------KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPA 109 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC------HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc------hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceE
Confidence 679999999999999999996 4678999999997543 256889999999997 9999999999987 66789
Q ss_pred EEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCC-CeEEeecccccc
Q 012219 246 LIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSEL-EAFVADFGVARL 324 (468)
Q Consensus 246 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~-~~kl~Dfg~~~~ 324 (468)
+||||+++++|.+++.. +++.++..++.|++.||+||| +.+|+||||||+||+++.++ .+||+|||+++.
T Consensus 110 lv~e~~~~~~l~~~~~~------~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~ 180 (330)
T 3nsz_A 110 LVFEHVNNTDFKQLYQT------LTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 180 (330)
T ss_dssp EEEECCCCCCHHHHGGG------CCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EEEeccCchhHHHHHHh------CCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceE
Confidence 99999999999998853 788999999999999999999 77999999999999999776 899999999987
Q ss_pred ccCCCCCceeccccccccccccccC-CCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcc------cccc-----
Q 012219 325 LNFDSSNRTLLAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKN------IKLI----- 392 (468)
Q Consensus 325 ~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~------~~~~----- 392 (468)
.... .......|+..|+|||++.+ ..++.++|||||||++|||++|+.||............. ....
T Consensus 181 ~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 259 (330)
T 3nsz_A 181 YHPG-QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDK 259 (330)
T ss_dssp CCTT-CCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred cCCC-CccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHH
Confidence 6533 23344578999999999877 678999999999999999999999985432211100000 0000
Q ss_pred ----------cccC--------CCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 393 ----------DLLD--------PRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 393 ----------~~~~--------~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
+... ........... ...+.+++.+||+.||++|||+++++++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~li~~~L~~dP~~Rpta~e~l~h 320 (330)
T 3nsz_A 260 YNIELDPRFNDILGRHSRKRWERFVHSENQHLV---SPEALDFLDKLLRYDHQSRLTAREAMEH 320 (330)
T ss_dssp TTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGC---CHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred hccccccchhhhhhhccccchhhhccccccccC---CHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 0000 00000000001 1237789999999999999999999864
No 214
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=2.1e-41 Score=324.82 Aligned_cols=258 Identities=23% Similarity=0.367 Sum_probs=197.7
Q ss_pred HHhhCccccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhcc--CCceeeEEEEEeeCCEE
Q 012219 167 EATEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIR--HRNIVKLYGFCLHRKCM 244 (468)
Q Consensus 167 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~~~~ 244 (468)
...++|.+.+.||+|+||.||++...+++.||||++...... ....+.+.+|++++.+++ |+||+++++++...+..
T Consensus 25 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~ 103 (313)
T 3cek_A 25 VKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEAD-NQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYI 103 (313)
T ss_dssp ETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCC-HHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEE
T ss_pred eccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEecccccc-ccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEE
Confidence 345679999999999999999999888999999999765432 234578899999999997 59999999999999999
Q ss_pred EEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccccc
Q 012219 245 FLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARL 324 (468)
Q Consensus 245 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~ 324 (468)
++||| +.+++|.+++.... .+++.+++.++.|++.||.||| +.+|+||||||+||++++ +.+||+|||+++.
T Consensus 104 ~lv~e-~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~ 175 (313)
T 3cek_A 104 YMVME-CGNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIVD-GMLKLIDFGIANQ 175 (313)
T ss_dssp EEEEC-CCSEEHHHHHHHCS---SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEET-TEEEECCCSSSCC
T ss_pred EEEEe-cCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcccEEEEC-CeEEEeecccccc
Confidence 99999 56789999998654 4899999999999999999999 779999999999999965 8999999999987
Q ss_pred ccCCCC--CceeccccccccccccccC-----------CCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhccccc
Q 012219 325 LNFDSS--NRTLLAGTYGYIAPELAYT-----------MVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKL 391 (468)
Q Consensus 325 ~~~~~~--~~~~~~g~~~y~aPE~~~~-----------~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~ 391 (468)
...... ......|++.|+|||++.+ ..++.++||||||+++|||++|+.||..........
T Consensus 176 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~------ 249 (313)
T 3cek_A 176 MQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL------ 249 (313)
T ss_dssp --------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHH------
T ss_pred ccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHH------
Confidence 643222 1234568999999999865 468889999999999999999999997543221111
Q ss_pred ccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHH-HHHhc
Q 012219 392 IDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSN-EFIAR 442 (468)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~-~l~~~ 442 (468)
....++............ .+.+++.+||+.||++|||+.++++ .+...
T Consensus 250 ~~~~~~~~~~~~~~~~~~---~l~~li~~~l~~dp~~Rps~~ell~h~~~~~ 298 (313)
T 3cek_A 250 HAIIDPNHEIEFPDIPEK---DLQDVLKCCLKRDPKQRISIPELLAHPYVQI 298 (313)
T ss_dssp HHHHCTTSCCCCCCCSCH---HHHHHHHHHTCSSTTTSCCHHHHHTSHHHHC
T ss_pred HHHHhcccccCCcccchH---HHHHHHHHHccCCcccCcCHHHHhcCccccC
Confidence 111111111111111111 2667899999999999999999995 44443
No 215
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=3e-41 Score=321.75 Aligned_cols=251 Identities=25% Similarity=0.438 Sum_probs=189.9
Q ss_pred hhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEee-------
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLH------- 240 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~------- 240 (468)
.++|.+.+.||+|+||.||+|+. .+++.||+|++.... ...+.+.+|++++++++||||+++++++.+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE----EKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKP 80 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEH----HHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC-
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccH----HHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhh
Confidence 46799999999999999999975 579999999996532 234678899999999999999999998865
Q ss_pred ------CCEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCe
Q 012219 241 ------RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEA 314 (468)
Q Consensus 241 ------~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~ 314 (468)
....++||||+++|+|.+++.... ..+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+
T Consensus 81 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dlkp~Nil~~~~~~~ 155 (303)
T 1zy4_A 81 MTAVKKKSTLFIQMEYCENGTLYDLIHSEN--LNQQRDEYWRLFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNV 155 (303)
T ss_dssp -----CEEEEEEEEECCCSCBHHHHHHHSC--GGGCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCE
T ss_pred hcccccCCceEEEEecCCCCCHHHhhhccc--cccchHHHHHHHHHHHHHHHHHH---hCCeecccCCHHhEEEcCCCCE
Confidence 356899999999999999997643 33788999999999999999999 7799999999999999999999
Q ss_pred EEeeccccccccCC--------------CCCceeccccccccccccccCC-CCCccchhhHHHHHHHHHHhCCCCCCccc
Q 012219 315 FVADFGVARLLNFD--------------SSNRTLLAGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGKHPGELLS 379 (468)
Q Consensus 315 kl~Dfg~~~~~~~~--------------~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~Gvil~el~tg~~p~~~~~ 379 (468)
||+|||+++..... ........|++.|+|||++.+. .++.++|||||||++|||++ ||....
T Consensus 156 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~ 232 (303)
T 1zy4_A 156 KIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGM 232 (303)
T ss_dssp EECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHH
T ss_pred EEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCch
Confidence 99999999765421 1122345689999999998764 78999999999999999998 543221
Q ss_pred ccchhhhcccccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 380 SSSWSLDKNIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
........... ............. ...+.+++.+||+.||++|||+.+++++
T Consensus 233 ~~~~~~~~~~~----~~~~~~~~~~~~~---~~~~~~li~~~l~~dp~~Rps~~~ll~h 284 (303)
T 1zy4_A 233 ERVNILKKLRS----VSIEFPPDFDDNK---MKVEKKIIRLLIDHDPNKRPGARTLLNS 284 (303)
T ss_dssp HHHHHHHHHHS----TTCCCCTTCCTTT---SHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred hHHHHHHhccc----cccccCccccccc---hHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence 11111111000 1111111111111 1226679999999999999999999864
No 216
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=4.3e-41 Score=318.59 Aligned_cols=254 Identities=23% Similarity=0.337 Sum_probs=200.1
Q ss_pred HhhCccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEE
Q 012219 168 ATEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFL 246 (468)
Q Consensus 168 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 246 (468)
..++|.+.+.||+|+||.||+|... +++.||+|++...... ....+.+.+|++++++++||||+++++++...+..++
T Consensus 20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 98 (287)
T 2wei_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK-NKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYI 98 (287)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBS-SSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccc-hHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEE
Confidence 3468999999999999999999764 7899999999754432 1235678899999999999999999999999999999
Q ss_pred EEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCC---CCeEEeeccccc
Q 012219 247 IYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSE---LEAFVADFGVAR 323 (468)
Q Consensus 247 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~---~~~kl~Dfg~~~ 323 (468)
|+||+++++|.+++.... .+++.+++.++.|++.||.||| +.+++||||||+||+++.+ +.+||+|||++.
T Consensus 99 v~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~ 172 (287)
T 2wei_A 99 VGELYTGGELFDEIIKRK---RFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLST 172 (287)
T ss_dssp EECCCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGG
T ss_pred EEEccCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCChhhEEEecCCCcccEEEeccCcce
Confidence 999999999999886543 3899999999999999999999 7799999999999999764 479999999998
Q ss_pred cccCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCcc
Q 012219 324 LLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPV 403 (468)
Q Consensus 324 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (468)
..... .......+++.|+|||.+.+ .++.++||||||+++|+|++|+.||.............. .. .....+.
T Consensus 173 ~~~~~-~~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~--~~---~~~~~~~ 245 (287)
T 2wei_A 173 CFQQN-TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVET--GK---YAFDLPQ 245 (287)
T ss_dssp TBCCC-SSCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH--CC---CCCCSGG
T ss_pred eecCC-CccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHc--CC---CCCCchh
Confidence 76432 22334468999999998865 488999999999999999999999875432211110000 00 0001000
Q ss_pred chhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 404 DQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 404 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
..... ..+.+++.+||+.||++|||+.+++++
T Consensus 246 ~~~~~---~~~~~li~~~l~~dp~~Rps~~ell~h 277 (287)
T 2wei_A 246 WRTIS---DDAKDLIRKMLTFHPSLRITATQCLEH 277 (287)
T ss_dssp GTTSC---HHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred hhhcC---HHHHHHHHHHcccChhhCcCHHHHhcC
Confidence 01111 126789999999999999999999963
No 217
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=3.2e-41 Score=330.51 Aligned_cols=259 Identities=23% Similarity=0.270 Sum_probs=197.4
Q ss_pred hhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeC-----C
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHR-----K 242 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~ 242 (468)
.++|.+.+.||+|+||.||+|.. .+++.||||++...... ...+.+.+|++++.+++||||+++++++... .
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 103 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQ--TYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMK 103 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCH--HHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCC
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCc--HHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccc
Confidence 35799999999999999999975 47889999999754332 2346788999999999999999999999764 3
Q ss_pred EEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccc
Q 012219 243 CMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVA 322 (468)
Q Consensus 243 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~ 322 (468)
..++|+||+. |+|.+++... .+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++
T Consensus 104 ~~~iv~e~~~-~~L~~~l~~~----~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a 175 (364)
T 3qyz_A 104 DVYIVQDLME-TDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLA 175 (364)
T ss_dssp CEEEEEECCS-EEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred eEEEEEcccC-cCHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCChHhEEECCCCCEEEEeCcce
Confidence 6899999997 5899988653 3899999999999999999999 779999999999999999999999999999
Q ss_pred ccccCCCC---CceeccccccccccccccC-CCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcc----------
Q 012219 323 RLLNFDSS---NRTLLAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKN---------- 388 (468)
Q Consensus 323 ~~~~~~~~---~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~---------- 388 (468)
+....... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.............
T Consensus 176 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 255 (364)
T 3qyz_A 176 RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 255 (364)
T ss_dssp EECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHH
T ss_pred EecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHH
Confidence 87643221 1234579999999998654 458999999999999999999999997543221110000
Q ss_pred ----------cccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 389 ----------IKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 389 ----------~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
........+ ...+...........+.+++.+||+.||++|||+.+++++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 256 LNCIINLKARNYLLSLPHK-NKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp HHTCCCHHHHHHHHTSCCC-CCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHhhhhhHHHHHHhcCCc-cCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000000000 0000000000111237789999999999999999999853
No 218
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=3.2e-41 Score=337.23 Aligned_cols=199 Identities=21% Similarity=0.291 Sum_probs=171.5
Q ss_pred hhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhc------cCCceeeEEEEEeeC
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQI------RHRNIVKLYGFCLHR 241 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l------~h~niv~l~~~~~~~ 241 (468)
..+|.+.+.||+|+||.||+|.. .+++.||||++..... ..+.+.+|+++++.+ +|+||+++++++...
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~ 171 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKR----FHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFR 171 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCHH----HHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEET
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCccc----hHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccC
Confidence 35799999999999999999965 5689999999976532 235677888888877 577999999999999
Q ss_pred CEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCC--eEEeec
Q 012219 242 KCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELE--AFVADF 319 (468)
Q Consensus 242 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~--~kl~Df 319 (468)
...++||||+. ++|.+++..... ..+++..+..++.||+.||+||| +.+|+||||||+|||++.++. +||+||
T Consensus 172 ~~~~lv~e~~~-~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NILl~~~~~~~vkL~DF 246 (429)
T 3kvw_A 172 NHICMTFELLS-MNLYELIKKNKF-QGFSLPLVRKFAHSILQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDF 246 (429)
T ss_dssp TEEEEEECCCC-CBHHHHHHHTTT-CCCCHHHHHHHHHHHHHHHHHHH---HHTEECSCCSGGGEEESSTTSCCEEECCC
T ss_pred CeEEEEEeccC-CCHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEccCCCcceEEeec
Confidence 99999999996 699998876542 34899999999999999999999 679999999999999999987 999999
Q ss_pred cccccccCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCccc
Q 012219 320 GVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLS 379 (468)
Q Consensus 320 g~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~ 379 (468)
|+++.... ......||+.|+|||++.+..++.++|||||||++|||+||+.||....
T Consensus 247 G~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~ 303 (429)
T 3kvw_A 247 GSSCYEHQ---RVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGED 303 (429)
T ss_dssp TTCEETTC---CCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ccceecCC---cccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCC
Confidence 99976532 2334578999999999999999999999999999999999999987543
No 219
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=6.1e-42 Score=329.37 Aligned_cols=258 Identities=23% Similarity=0.398 Sum_probs=198.5
Q ss_pred HhhCccccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEE
Q 012219 168 ATEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLI 247 (468)
Q Consensus 168 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 247 (468)
..++|.+.+.||+|+||.||+|...+ .+|+|+++...... ...+.|.+|+.++++++||||+++++++......++|
T Consensus 31 ~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv 107 (319)
T 2y4i_B 31 PFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNE-DQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAII 107 (319)
T ss_dssp CCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCC-CCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEE
T ss_pred CHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCH-HHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEE
Confidence 35789999999999999999998754 49999987543221 2234577899999999999999999999999999999
Q ss_pred EEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccC
Q 012219 248 YEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNF 327 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~ 327 (468)
+||+++++|.+++.... ..+++..++.++.||+.||+||| +.+|+||||||+||+++ ++.+||+|||+++....
T Consensus 108 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~ 181 (319)
T 2y4i_B 108 TSLCKGRTLYSVVRDAK--IVLDVNKTRQIAQEIVKGMGYLH---AKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGV 181 (319)
T ss_dssp CBCCCSEEHHHHTTSSC--CCCCSHHHHHHHHHHHHHHHHHH---HTTCCCCCCCSTTEEEC---CCEECCCSCCC----
T ss_pred eecccCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHH---hCCccccCCChhhEEEe-CCCEEEeecCCcccccc
Confidence 99999999999997643 34889999999999999999999 77999999999999998 67999999999876532
Q ss_pred C-----CCCceeccccccccccccccC---------CCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhccccccc
Q 012219 328 D-----SSNRTLLAGTYGYIAPELAYT---------MVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLID 393 (468)
Q Consensus 328 ~-----~~~~~~~~g~~~y~aPE~~~~---------~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~ 393 (468)
. ........|++.|+|||++.. ..++.++||||||+++|||++|+.||........... ...
T Consensus 182 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~----~~~ 257 (319)
T 2y4i_B 182 LQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQ----MGT 257 (319)
T ss_dssp ------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHH----HHT
T ss_pred ccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH----hcc
Confidence 1 122233468999999998864 3578899999999999999999999976443221111 011
Q ss_pred ccCCCCCC-ccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCCC
Q 012219 394 LLDPRLSP-PVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNKA 445 (468)
Q Consensus 394 ~~~~~~~~-~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~~ 445 (468)
...+.... ..+. .+.+++.+||+.||++|||+.++++.|+...+.
T Consensus 258 ~~~~~~~~~~~~~-------~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~ 303 (319)
T 2y4i_B 258 GMKPNLSQIGMGK-------EISDILLFCWAFEQEERPTFTKLMDMLEKLPKR 303 (319)
T ss_dssp TCCCCCCCSSCCT-------THHHHHHHHHCSSTTTSCCHHHHHHHHTTC---
T ss_pred CCCCCCCcCCCCH-------HHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHh
Confidence 11111111 1111 166789999999999999999999999887654
No 220
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=1.2e-41 Score=333.18 Aligned_cols=258 Identities=23% Similarity=0.265 Sum_probs=180.6
Q ss_pred hhCccccceeeeeCCceEEEEE-cCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeC------
Q 012219 169 TEDFHIKYCIGTGGYGSVYRAR-LPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHR------ 241 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------ 241 (468)
.++|.+.+.||+|+||.||+|. ..+|+.||||++...... ....+.+.+|+++++.++||||+++++++...
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 106 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS-IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 106 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSS-HHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccC-HHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccC
Confidence 3679999999999999999997 457899999999764322 23456788999999999999999999998754
Q ss_pred CEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccc
Q 012219 242 KCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGV 321 (468)
Q Consensus 242 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~ 321 (468)
...++|+|++ +++|.+++.. ..+++..+..++.||+.||.||| +.+|+||||||+||+++.++.+||+|||+
T Consensus 107 ~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kL~DFG~ 178 (367)
T 2fst_X 107 NDVYLVTHLM-GADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGL 178 (367)
T ss_dssp CCCEEEEECC-CEECC---------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECC---
T ss_pred CeEEEEeccc-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHhhEEECCCCCEEEeeccc
Confidence 5579999999 6899888865 23899999999999999999999 77999999999999999999999999999
Q ss_pred cccccCCCCCceeccccccccccccccC-CCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhc----c--------
Q 012219 322 ARLLNFDSSNRTLLAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDK----N-------- 388 (468)
Q Consensus 322 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~----~-------- 388 (468)
++.... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||............ .
T Consensus 179 a~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~ 255 (367)
T 2fst_X 179 ARHTAD---EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLK 255 (367)
T ss_dssp ---------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHT
T ss_pred cccccc---cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 987542 2334578999999999876 67899999999999999999999999754321110000 0
Q ss_pred ----c---ccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 389 ----I---KLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 389 ----~---~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
. .....+..................+.+++.+||+.||++|||+.+++++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 256 KISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp TCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 0 0000000000000000000011236789999999999999999999854
No 221
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=1.1e-41 Score=330.58 Aligned_cols=258 Identities=22% Similarity=0.382 Sum_probs=197.4
Q ss_pred hhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHH-HhhccCCceeeEEEEEeeCCEEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARL-LSQIRHRNIVKLYGFCLHRKCMFL 246 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~-l~~l~h~niv~l~~~~~~~~~~~l 246 (468)
.++|.+.+.||+|+||.||+|.. .+|+.||||++....... ....+..|..+ ++.++||||+++++++...+..++
T Consensus 50 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~l 127 (340)
T 3an0_A 50 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQ--EQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWI 127 (340)
T ss_dssp SSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCH--HHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEE
T ss_pred hhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcH--HHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEE
Confidence 46788999999999999999975 678999999997654332 23445555555 778899999999999999999999
Q ss_pred EEEeccCCChhhhhhcC-cccCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CeEecCCCCCceeeCCCCCeEEeecccccc
Q 012219 247 IYEYMEMGSLFCVLRTD-EEAVGLDWAKRVNVVKGMCHALSYLHHDCTP-PIVHRDISSNNVLLNSELEAFVADFGVARL 324 (468)
Q Consensus 247 v~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~-~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~ 324 (468)
||||+++ +|.+++... .....+++..++.++.||+.||+||| +. +|+||||||+||+++.++.+||+|||+++.
T Consensus 128 v~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH---~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~ 203 (340)
T 3an0_A 128 CMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGISGY 203 (340)
T ss_dssp EECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCSCCSTTEEECSTTCEEECCCSHHHH
T ss_pred EHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeeCCCcee
Confidence 9999985 998887642 12345899999999999999999999 54 999999999999999999999999999987
Q ss_pred ccCCCCCceecccccccccccccc----CCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCC
Q 012219 325 LNFDSSNRTLLAGTYGYIAPELAY----TMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLS 400 (468)
Q Consensus 325 ~~~~~~~~~~~~g~~~y~aPE~~~----~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (468)
.... .......||+.|+|||++. ...++.++|||||||++|||+||+.||............ ......+...
T Consensus 204 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~~~---~~~~~~~~~~ 279 (340)
T 3an0_A 204 LVDS-VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQ---VVEEPSPQLP 279 (340)
T ss_dssp HSCH-HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHH---HHHSCCCCCC
T ss_pred cccc-cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHHHH---HhcCCCCCCC
Confidence 6421 1222346899999999964 347899999999999999999999999754322111111 1111111111
Q ss_pred CccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHH-HHHhc
Q 012219 401 PPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSN-EFIAR 442 (468)
Q Consensus 401 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~-~l~~~ 442 (468)
. .... ..+.+++.+||+.||++|||+.++++ .++..
T Consensus 280 ~---~~~~---~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~ 316 (340)
T 3an0_A 280 A---DKFS---AEFVDFTSQCLKKNSKERPTYPELMQHPFFTL 316 (340)
T ss_dssp G---GGSC---HHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHH
T ss_pred c---ccCC---HHHHHHHHHHccCCcccCcCHHHHhcCcCccc
Confidence 1 1111 22678999999999999999999995 34443
No 222
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=2.3e-41 Score=334.75 Aligned_cols=258 Identities=21% Similarity=0.254 Sum_probs=191.1
Q ss_pred hCccccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCC------E
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRK------C 243 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------~ 243 (468)
.+|.+.+.||+|+||.||+|+...+..+|+|++...... ..+|+++++.++||||+++++++.... .
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~-------~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~ 112 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF-------KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVF 112 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS-------CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch-------HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceE
Confidence 468999999999999999999877777999988654322 236999999999999999999986433 3
Q ss_pred EEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeC-CCCCeEEeecccc
Q 012219 244 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLN-SELEAFVADFGVA 322 (468)
Q Consensus 244 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~-~~~~~kl~Dfg~~ 322 (468)
.++||||++++.+............+++..+..++.||+.||+||| +.+|+||||||+|||++ .++.+||+|||++
T Consensus 113 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a 189 (394)
T 4e7w_A 113 LNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSA 189 (394)
T ss_dssp EEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred EEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEcCCCCcEEEeeCCCc
Confidence 7899999987554443332222345899999999999999999999 77999999999999999 7899999999999
Q ss_pred ccccCCCCCceeccccccccccccccCC-CCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhccc------------
Q 012219 323 RLLNFDSSNRTLLAGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNI------------ 389 (468)
Q Consensus 323 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~------------ 389 (468)
+..... .......||+.|+|||++.+. .++.++|||||||++|||++|+.||..............
T Consensus 190 ~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~ 268 (394)
T 4e7w_A 190 KILIAG-EPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKT 268 (394)
T ss_dssp EECCTT-CCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHH
T ss_pred ccccCC-CCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence 876433 233345789999999988764 589999999999999999999999975432111000000
Q ss_pred ccccccCCCCCC----ccchhHH-HHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 390 KLIDLLDPRLSP----PVDQKIR-QDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 390 ~~~~~~~~~~~~----~~~~~~~-~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
.........+.. +...... .....+.+++.+||+.||++|||+.+++++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 322 (394)
T 4e7w_A 269 MNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH 322 (394)
T ss_dssp HCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred hChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence 000000011100 0000000 011237789999999999999999999854
No 223
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=7.2e-41 Score=324.27 Aligned_cols=253 Identities=23% Similarity=0.326 Sum_probs=170.4
Q ss_pred hhCccccc-eeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEee----CC
Q 012219 169 TEDFHIKY-CIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLH----RK 242 (468)
Q Consensus 169 ~~~~~~~~-~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~ 242 (468)
.++|.+.+ .||+|+||.||+|... +++.||||++...... ..+....+..++||||+++++++.. ..
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 99 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKA-------RQEVDHHWQASGGPHIVCILDVYENMHHGKR 99 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSHHH-------HHHHHHHHHHTTSTTBCCEEEEEEEEETTEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcHHH-------HHHHHHHHHhcCCCChHHHHHHHhhccCCCc
Confidence 46788854 6999999999999764 7999999999754321 1123334566799999999999876 45
Q ss_pred EEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCC---CCCeEEeec
Q 012219 243 CMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNS---ELEAFVADF 319 (468)
Q Consensus 243 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~---~~~~kl~Df 319 (468)
..++||||+++|+|.+++..... ..+++.+++.++.|++.||.||| +.+|+||||||+||+++. ++.+||+||
T Consensus 100 ~~~lv~e~~~gg~L~~~l~~~~~-~~l~~~~~~~i~~ql~~~l~~LH---~~~ivH~dlkp~NIll~~~~~~~~~kl~Df 175 (336)
T 3fhr_A 100 CLLIIMECMEGGELFSRIQERGD-QAFTEREAAEIMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDF 175 (336)
T ss_dssp EEEEEEECCTTEEHHHHHHTC-C-CCCBHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCC
T ss_pred eEEEEEeccCCCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEEecCCCceEEEecc
Confidence 58999999999999999986532 35899999999999999999999 779999999999999986 455999999
Q ss_pred cccccccCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCC
Q 012219 320 GVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRL 399 (468)
Q Consensus 320 g~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (468)
|+++.... .......||+.|+|||++.+..++.++|||||||++|+|++|+.||............... ........
T Consensus 176 g~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~-~~~~~~~~ 252 (336)
T 3fhr_A 176 GFAKETTQ--NALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRR-IRLGQYGF 252 (336)
T ss_dssp TTCEEC------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC----------------------CC
T ss_pred ccceeccc--cccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHh-hhcccccc
Confidence 99986542 2233456899999999998889999999999999999999999999654332111100000 00000111
Q ss_pred CCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 400 SPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 400 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
..+....... .+.+++.+||+.||++|||+++++++
T Consensus 253 ~~~~~~~~~~---~~~~li~~~L~~dP~~Rpt~~ell~h 288 (336)
T 3fhr_A 253 PNPEWSEVSE---DAKQLIRLLLKTDPTERLTITQFMNH 288 (336)
T ss_dssp CTTTSTTCCH---HHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred CchhhccCCH---HHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 1111111111 26679999999999999999999963
No 224
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=3.4e-41 Score=334.07 Aligned_cols=257 Identities=21% Similarity=0.272 Sum_probs=195.8
Q ss_pred hCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhcc--------CCceeeEEEEEe-
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIR--------HRNIVKLYGFCL- 239 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~--------h~niv~l~~~~~- 239 (468)
++|.+.+.||+|+||.||+|+. .+++.||||++..... ..+.+.+|+++++.++ |+||+++++++.
T Consensus 37 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~ 112 (397)
T 1wak_A 37 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEH----YTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKI 112 (397)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHH----HHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEE
T ss_pred CeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCCc----chHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceee
Confidence 6799999999999999999964 5788999999975432 3467889999999986 788999999987
Q ss_pred ---eCCEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CeEecCCCCCceeeCCCC---
Q 012219 240 ---HRKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTP-PIVHRDISSNNVLLNSEL--- 312 (468)
Q Consensus 240 ---~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~-~ivH~dlk~~NIll~~~~--- 312 (468)
.....++||||+ ++++.+.+.... ...+++..++.++.||+.||+||| +. +|+||||||+|||++.++
T Consensus 113 ~~~~~~~~~lv~e~~-~~~l~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~lH---~~~givHrDikp~NIll~~~~~~~ 187 (397)
T 1wak_A 113 SGVNGTHICMVFEVL-GHHLLKWIIKSN-YQGLPLPCVKKIIQQVLQGLDYLH---TKCRIIHTDIKPENILLSVNEQYI 187 (397)
T ss_dssp EETTEEEEEEEECCC-CCBHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECCCCSGGGEEECCCHHHH
T ss_pred cCCCCceEEEEEecc-CccHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHH---HhCCEecCCCCHHHeeEeccchhh
Confidence 456789999999 566666665432 234899999999999999999999 66 999999999999999775
Q ss_pred ----------------------------------------------CeEEeeccccccccCCCCCceecccccccccccc
Q 012219 313 ----------------------------------------------EAFVADFGVARLLNFDSSNRTLLAGTYGYIAPEL 346 (468)
Q Consensus 313 ----------------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~ 346 (468)
.+||+|||+++..... .....||+.|+|||+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~---~~~~~gt~~y~aPE~ 264 (397)
T 1wak_A 188 RRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH---FTEDIQTRQYRSLEV 264 (397)
T ss_dssp HHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC---SCSCCSCGGGCCHHH
T ss_pred hhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc---CccCCCCCcccCChh
Confidence 8999999999876432 334578999999999
Q ss_pred ccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhh--hccccc------------------ccccCC--------C
Q 012219 347 AYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSL--DKNIKL------------------IDLLDP--------R 398 (468)
Q Consensus 347 ~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~--~~~~~~------------------~~~~~~--------~ 398 (468)
+.+..++.++|||||||++|||+||+.||.......... ...... .+.... .
T Consensus 265 ~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (397)
T 1wak_A 265 LIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITK 344 (397)
T ss_dssp HHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCC
T ss_pred hcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccc
Confidence 999999999999999999999999999997543211100 000000 000000 0
Q ss_pred CCC-ccc-------hhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 399 LSP-PVD-------QKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 399 ~~~-~~~-------~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
..+ ... .........+.+++.+||+.||++|||+.+++++
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 392 (397)
T 1wak_A 345 LKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH 392 (397)
T ss_dssp CCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred cCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence 000 000 0011233458899999999999999999999853
No 225
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=3.7e-41 Score=324.93 Aligned_cols=264 Identities=25% Similarity=0.350 Sum_probs=197.1
Q ss_pred HhhCccccceeeeeCCceEEEEEc--CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhc---cCCceeeEEEEEe---
Q 012219 168 ATEDFHIKYCIGTGGYGSVYRARL--PSGKVVALKKLHRSETEELASLESFGNEARLLSQI---RHRNIVKLYGFCL--- 239 (468)
Q Consensus 168 ~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l---~h~niv~l~~~~~--- 239 (468)
+.++|.+.+.||+|+||.||+|.. .+++.||+|++....... .....+.+|+++++.+ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~ 87 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEE-GMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR 87 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTT-SCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccc-cCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence 347899999999999999999986 468899999997544321 1123455777777666 8999999999987
Q ss_pred --eCCEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEe
Q 012219 240 --HRKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVA 317 (468)
Q Consensus 240 --~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~ 317 (468)
.....++||||++ |+|.+++..... ..+++..++.++.|++.||.||| +.+|+||||||+||+++.++.+||+
T Consensus 88 ~~~~~~~~lv~e~~~-~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~gi~H~dlkp~Nili~~~~~~kl~ 162 (326)
T 1blx_A 88 TDRETKLTLVFEHVD-QDLTTYLDKVPE-PGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLA 162 (326)
T ss_dssp CSSEEEEEEEEECCS-CBHHHHHHHSCT-TCSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEEC
T ss_pred cCCCceEEEEEecCC-CCHHHHHHhccc-CCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCHHHeEEcCCCCEEEe
Confidence 4567899999998 699999876543 24899999999999999999999 7799999999999999999999999
Q ss_pred eccccccccCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcc--------c
Q 012219 318 DFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKN--------I 389 (468)
Q Consensus 318 Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~--------~ 389 (468)
|||+++..... .......|++.|+|||++.+..++.++|||||||++|||++|+.||............. .
T Consensus 163 Dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~ 241 (326)
T 1blx_A 163 DFGLARIYSFQ-MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEE 241 (326)
T ss_dssp SCCSCCCCCGG-GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGG
T ss_pred cCcccccccCC-CCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcc
Confidence 99999765422 22334568999999999999999999999999999999999999997543211100000 0
Q ss_pred cc-------ccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 390 KL-------IDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 390 ~~-------~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
.. ......................+.+++.+||+.||++|||+.+++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 297 (326)
T 1blx_A 242 DWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 297 (326)
T ss_dssp GSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred cCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 00 00000000000000000011226679999999999999999999953
No 226
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=1.8e-41 Score=331.73 Aligned_cols=273 Identities=20% Similarity=0.233 Sum_probs=188.7
Q ss_pred HHHHHHhhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeC
Q 012219 163 QDMIEATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHR 241 (468)
Q Consensus 163 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 241 (468)
.......++|.+.+.||+|+||.||+|.. .+++.||||++...... ...+.++++.+..++||||+++++++...
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~~~~~~l~~l~h~niv~~~~~~~~~ 91 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRF----RNRELQIMQDLAVLHHPNIVQLQSYFYTL 91 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTC----CCHHHHHHHHHHHHCCTTBCCEEEEEEEE
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccc----cHHHHHHHHHHHhcCCCCcccHHHhhhcc
Confidence 34556778999999999999999999976 56899999998654332 23456788888999999999999998653
Q ss_pred CE-------EEEEEEeccCCChhhhhhc-CcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCC-CC
Q 012219 242 KC-------MFLIYEYMEMGSLFCVLRT-DEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNS-EL 312 (468)
Q Consensus 242 ~~-------~~lv~e~~~~gsL~~~l~~-~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~-~~ 312 (468)
.. .++||||+++ +|...+.. ......+++..+..++.|++.||.|||.+ +.+|+||||||+||+++. ++
T Consensus 92 ~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~~~ivH~Dlkp~NIll~~~~~ 169 (360)
T 3e3p_A 92 GERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLP-SVNVCHRDIKPHNVLVNEADG 169 (360)
T ss_dssp CSSCTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTST-TTCCBCSCCCGGGEEEETTTT
T ss_pred ccccccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCC-CCCeecCcCCHHHEEEeCCCC
Confidence 32 7899999986 44443332 22334588999999999999999999943 679999999999999997 89
Q ss_pred CeEEeeccccccccCCCCCceeccccccccccccccCC-CCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcc---
Q 012219 313 EAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKN--- 388 (468)
Q Consensus 313 ~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~--- 388 (468)
.+||+|||+++..... .......||+.|+|||++.+. .++.++|||||||++|||+||+.||.............
T Consensus 170 ~~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~ 248 (360)
T 3e3p_A 170 TLKLCDFGSAKKLSPS-EPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVL 248 (360)
T ss_dssp EEEECCCTTCBCCCTT-SCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHH
T ss_pred cEEEeeCCCceecCCC-CCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHc
Confidence 9999999999876533 233345789999999998655 48999999999999999999999997543221100000
Q ss_pred ----cccccccCCCC---------CCccchhH----HHHHHHHHHHHHhcccCCCCCCCCHHHHHHH-HHhc
Q 012219 389 ----IKLIDLLDPRL---------SPPVDQKI----RQDIILVSTVAFSCLRSQPKSRPTMQLVSNE-FIAR 442 (468)
Q Consensus 389 ----~~~~~~~~~~~---------~~~~~~~~----~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~-l~~~ 442 (468)
.......++.. ........ ......+.+++.+||+.||++|||+.|++++ |++.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~ 320 (360)
T 3e3p_A 249 GCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDE 320 (360)
T ss_dssp CCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGG
T ss_pred CCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccc
Confidence 00000000000 00000000 0012347789999999999999999999954 4433
No 227
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=1.7e-40 Score=323.94 Aligned_cols=263 Identities=23% Similarity=0.335 Sum_probs=197.0
Q ss_pred hhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeC-----C
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHR-----K 242 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~ 242 (468)
.++|.+.+.||+|+||.||+|.. .+|+.||||++...... .....+.+|++++++++||||+++++++... .
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 87 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKP--LFALRTLREIKILKHFKHENIITIFNIQRPDSFENFN 87 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSH--HHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCC
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccc--hHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccc
Confidence 36799999999999999999975 46899999999754332 2346788999999999999999999998764 6
Q ss_pred EEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccc
Q 012219 243 CMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVA 322 (468)
Q Consensus 243 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~ 322 (468)
..++||||+. |+|.+++... .+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++
T Consensus 88 ~~~lv~e~~~-~~L~~~~~~~----~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a 159 (353)
T 2b9h_A 88 EVYIIQELMQ-TDLHRVISTQ----MLSDDHIQYFIYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLA 159 (353)
T ss_dssp CEEEEECCCS-EEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTC
T ss_pred eEEEEEeccC-ccHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEcCCCcEEEEecccc
Confidence 7899999997 5899988753 3899999999999999999999 779999999999999999999999999999
Q ss_pred ccccCCCCC----------ceeccccccccccccccC-CCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcc---
Q 012219 323 RLLNFDSSN----------RTLLAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKN--- 388 (468)
Q Consensus 323 ~~~~~~~~~----------~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~--- 388 (468)
+........ .....||+.|+|||++.. ..++.++|||||||++|||++|+.||.............
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~ 239 (353)
T 2b9h_A 160 RIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGII 239 (353)
T ss_dssp EECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH
T ss_pred cccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHh
Confidence 876432111 122468999999998754 678999999999999999999999997543211100000
Q ss_pred --------------cccccccC--CCCC-CccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH-HHh
Q 012219 389 --------------IKLIDLLD--PRLS-PPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE-FIA 441 (468)
Q Consensus 389 --------------~~~~~~~~--~~~~-~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~-l~~ 441 (468)
....+... +... .............+.+++.+||+.||++|||+.+++++ +.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~ 310 (353)
T 2b9h_A 240 GTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQ 310 (353)
T ss_dssp CCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGT
T ss_pred CCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCcccc
Confidence 00000000 0000 00000000111236789999999999999999999953 443
No 228
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.8e-41 Score=337.09 Aligned_cols=200 Identities=26% Similarity=0.420 Sum_probs=154.7
Q ss_pred hCccc-cceeeeeCCceEEEEEcC---CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEee--CCE
Q 012219 170 EDFHI-KYCIGTGGYGSVYRARLP---SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLH--RKC 243 (468)
Q Consensus 170 ~~~~~-~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~ 243 (468)
+.|.+ .++||+|+||.||+|+.. +++.||+|++...... ..+.+|++++++++||||+++++++.. ...
T Consensus 20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 94 (405)
T 3rgf_A 20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGIS-----MSACREIALLRELKHPNVISLQKVFLSHADRK 94 (405)
T ss_dssp HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSCC-----HHHHHHHHHHHHCCCTTBCCCCEEEEETTTTE
T ss_pred hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCCC-----HHHHHHHHHHHhcCCCCeeeEeeEEecCCCCe
Confidence 34665 457999999999999854 5789999999765432 467799999999999999999999954 678
Q ss_pred EEEEEEeccCCChhhhhhcCc------ccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee----CCCCC
Q 012219 244 MFLIYEYMEMGSLFCVLRTDE------EAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLL----NSELE 313 (468)
Q Consensus 244 ~~lv~e~~~~gsL~~~l~~~~------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll----~~~~~ 313 (468)
.++||||+. |+|.+++.... ....+++..++.++.||+.||+||| +.+|+||||||+|||+ +.++.
T Consensus 95 ~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~ 170 (405)
T 3rgf_A 95 VWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGR 170 (405)
T ss_dssp EEEEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECCSSTTTTC
T ss_pred EEEEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeCCCcCHHHeEEecCCCCCCc
Confidence 999999997 47877775321 2234899999999999999999999 7799999999999999 67789
Q ss_pred eEEeeccccccccCCC---CCceeccccccccccccccCC-CCCccchhhHHHHHHHHHHhCCCCCCcc
Q 012219 314 AFVADFGVARLLNFDS---SNRTLLAGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGKHPGELL 378 (468)
Q Consensus 314 ~kl~Dfg~~~~~~~~~---~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~Gvil~el~tg~~p~~~~ 378 (468)
+||+|||+++...... .......||+.|+|||++.+. .++.++|||||||++|||+||+.||...
T Consensus 171 ~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 239 (405)
T 3rgf_A 171 VKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 239 (405)
T ss_dssp EEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCC
T ss_pred EEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCc
Confidence 9999999998764322 223345789999999998874 5899999999999999999999999643
No 229
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.9e-41 Score=334.31 Aligned_cols=259 Identities=24% Similarity=0.275 Sum_probs=191.5
Q ss_pred HHhhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeC----
Q 012219 167 EATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHR---- 241 (468)
Q Consensus 167 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~---- 241 (468)
...++|.+.+.||+|+||.||+|.. .+|+.||||++...... ..+|+++++.++||||+++++++...
T Consensus 4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~-------~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 76 (383)
T 3eb0_A 4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY-------KNRELDIMKVLDHVNIIKLVDYFYTTGDEE 76 (383)
T ss_dssp --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS-------CCHHHHHHTTCCCTTBCCEEEEEEEC----
T ss_pred cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch-------HHHHHHHHHHcCCCCccchhheeeecCccc
Confidence 3467899999999999999999964 67999999999755322 23799999999999999999998543
Q ss_pred ----------------------------------CEEEEEEEeccCCChhhhhhcC-cccCCCCHHHHHHHHHHHHHHHH
Q 012219 242 ----------------------------------KCMFLIYEYMEMGSLFCVLRTD-EEAVGLDWAKRVNVVKGMCHALS 286 (468)
Q Consensus 242 ----------------------------------~~~~lv~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~l~ 286 (468)
...++||||++ |+|.+.+... .....+++..+..++.||+.||+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~ 155 (383)
T 3eb0_A 77 PKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVG 155 (383)
T ss_dssp ---------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Confidence 34889999998 5877776531 12345899999999999999999
Q ss_pred HHHhcCCCCeEecCCCCCceeeC-CCCCeEEeeccccccccCCCCCceeccccccccccccccCC-CCCccchhhHHHHH
Q 012219 287 YLHHDCTPPIVHRDISSNNVLLN-SELEAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTM-VVTEKCDVYSFGVV 364 (468)
Q Consensus 287 ~LH~~~~~~ivH~dlk~~NIll~-~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~Gvi 364 (468)
||| +.+|+||||||+||+++ .++.+||+|||+++..... .......+|+.|+|||++.+. .++.++||||+||+
T Consensus 156 ~LH---~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~i 231 (383)
T 3eb0_A 156 FIH---SLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPS-EPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCV 231 (383)
T ss_dssp HHH---TTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTT-SCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHH
T ss_pred HHH---HCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCC-CCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHH
Confidence 999 88999999999999998 6889999999999876433 233445789999999988764 58999999999999
Q ss_pred HHHHHhCCCCCCcccccchhhhcc---------------cccccccCCCCCCc-cchhH-HHHHHHHHHHHHhcccCCCC
Q 012219 365 ALEVLMGKHPGELLSSSSWSLDKN---------------IKLIDLLDPRLSPP-VDQKI-RQDIILVSTVAFSCLRSQPK 427 (468)
Q Consensus 365 l~el~tg~~p~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~-~~~~~-~~~~~~l~~l~~~cl~~dP~ 427 (468)
+|||++|+.||............. ....+..-+..... ..... ......+.+++.+||+.||+
T Consensus 232 l~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~ 311 (383)
T 3eb0_A 232 FGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPD 311 (383)
T ss_dssp HHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGG
T ss_pred HHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChh
Confidence 999999999997543221100000 00000000000000 00000 00112267899999999999
Q ss_pred CCCCHHHHHH
Q 012219 428 SRPTMQLVSN 437 (468)
Q Consensus 428 ~RPs~~~v~~ 437 (468)
+|||+.|+++
T Consensus 312 ~R~t~~e~l~ 321 (383)
T 3eb0_A 312 LRINPYEAMA 321 (383)
T ss_dssp GSCCHHHHHT
T ss_pred hCCCHHHHhc
Confidence 9999999984
No 230
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=1.5e-40 Score=322.14 Aligned_cols=257 Identities=18% Similarity=0.273 Sum_probs=198.2
Q ss_pred hCccccceeeeeCCceEEEEEc--CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCc------eeeEEEEEeeC
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL--PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRN------IVKLYGFCLHR 241 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n------iv~l~~~~~~~ 241 (468)
++|.+.+.||+|+||.||+|.. .+++.||||++..... ..+.+.+|+++++.++|++ ++++++++...
T Consensus 14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~ 89 (339)
T 1z57_A 14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDR----YCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHH 89 (339)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHH----HHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEET
T ss_pred CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCCc----hhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccC
Confidence 5799999999999999999975 4688999999975432 3467889999999887654 99999999999
Q ss_pred CEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCC-----------
Q 012219 242 KCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNS----------- 310 (468)
Q Consensus 242 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~----------- 310 (468)
+..++||||+ +++|.+++..... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.
T Consensus 90 ~~~~lv~e~~-~~~l~~~l~~~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~ 164 (339)
T 1z57_A 90 GHICIVFELL-GLSTYDFIKENGF-LPFRLDHIRKMAYQICKSVNFLH---SNKLTHTDLKPENILFVQSDYTEAYNPKI 164 (339)
T ss_dssp TEEEEEEECC-CCBHHHHHHHTTT-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCCCEEEEEC---
T ss_pred CcEEEEEcCC-CCCHHHHHHhcCC-CCCcHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEeccccccccCCcc
Confidence 9999999999 8899999976542 34889999999999999999999 779999999999999987
Q ss_pred --------CCCeEEeeccccccccCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccc
Q 012219 311 --------ELEAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSS 382 (468)
Q Consensus 311 --------~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~ 382 (468)
++.+||+|||+++.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.......
T Consensus 165 ~~~~~~~~~~~~kl~Dfg~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~ 241 (339)
T 1z57_A 165 KRDERTLINPDIKVVDFGSATYDDE---HHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKE 241 (339)
T ss_dssp -CEEEEESCCCEEECCCSSCEETTS---CCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHH
T ss_pred ccccccccCCCceEeeCcccccCcc---ccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHH
Confidence 67899999999986542 2234578999999999999999999999999999999999999997543211
Q ss_pred hhhhcc---cc----------ccccc---CCCCCCcc----------------chhHHHHHHHHHHHHHhcccCCCCCCC
Q 012219 383 WSLDKN---IK----------LIDLL---DPRLSPPV----------------DQKIRQDIILVSTVAFSCLRSQPKSRP 430 (468)
Q Consensus 383 ~~~~~~---~~----------~~~~~---~~~~~~~~----------------~~~~~~~~~~l~~l~~~cl~~dP~~RP 430 (468)
...... .. ..... ........ ..........+.+++.+||+.||++||
T Consensus 242 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rp 321 (339)
T 1z57_A 242 HLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRI 321 (339)
T ss_dssp HHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSC
T ss_pred HHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCccccc
Confidence 100000 00 00000 00000000 000001223478899999999999999
Q ss_pred CHHHHHHH
Q 012219 431 TMQLVSNE 438 (468)
Q Consensus 431 s~~~v~~~ 438 (468)
|+.|++++
T Consensus 322 t~~ell~h 329 (339)
T 1z57_A 322 TLREALKH 329 (339)
T ss_dssp CHHHHTTS
T ss_pred CHHHHhcC
Confidence 99999853
No 231
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=3.8e-41 Score=330.73 Aligned_cols=257 Identities=25% Similarity=0.295 Sum_probs=193.9
Q ss_pred hhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEE---
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCM--- 244 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~--- 244 (468)
.++|.+.+.||+|+||.||+|.. .+|+.||||++....... ...+.+.+|+.+++.++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 119 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSE-IFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 119 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSH-HHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccch-hHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccc
Confidence 36789999999999999999974 578999999997654332 3456788999999999999999999999876654
Q ss_pred ---EEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccc
Q 012219 245 ---FLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGV 321 (468)
Q Consensus 245 ---~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~ 321 (468)
++||||+. ++|.+.+.. .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+
T Consensus 120 ~~~~lv~e~~~-~~l~~~~~~-----~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~ 190 (371)
T 4exu_A 120 YDFYLVMPFMQ-TDLQKIMGM-----EFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGL 190 (371)
T ss_dssp CCCEEEEECCC-EEHHHHTTS-----CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECSTTC
T ss_pred eeEEEEEcccc-ccHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCcCHHHeEECCCCCEEEEecCc
Confidence 99999997 588887742 2899999999999999999999 77999999999999999999999999999
Q ss_pred cccccCCCCCceeccccccccccccccC-CCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcc----c-------
Q 012219 322 ARLLNFDSSNRTLLAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKN----I------- 389 (468)
Q Consensus 322 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~----~------- 389 (468)
++.... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||............. .
T Consensus 191 a~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 267 (371)
T 4exu_A 191 ARHADA---EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQ 267 (371)
T ss_dssp C-----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHT
T ss_pred cccccc---CcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHH
Confidence 986542 2334578999999999887 688999999999999999999999997543211100000 0
Q ss_pred --------ccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 390 --------KLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 390 --------~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
.....+..................+.+++.+||+.||++|||+.+++++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 268 KLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp TCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 0000000000110000000111237789999999999999999999854
No 232
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=5.1e-41 Score=351.81 Aligned_cols=256 Identities=25% Similarity=0.372 Sum_probs=201.2
Q ss_pred HhhCccccceeeeeCCceEEEEEcC----CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCE
Q 012219 168 ATEDFHIKYCIGTGGYGSVYRARLP----SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKC 243 (468)
Q Consensus 168 ~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 243 (468)
..++|.+.+.||+|+||.||+|.+. .+..||+|++...... ...+.|.+|+.++++++||||+++++++.+ +.
T Consensus 388 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~~ 464 (656)
T 2j0j_A 388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSD--SVREKFLQEALTMRQFDHPHIVKLIGVITE-NP 464 (656)
T ss_dssp CGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCH--HHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SS
T ss_pred ccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCH--HHHHHHHHHHHHHHhCCCCCCCeEEEEEec-Cc
Confidence 3467888999999999999999763 2567999998764432 234678999999999999999999999854 55
Q ss_pred EEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccc
Q 012219 244 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVAR 323 (468)
Q Consensus 244 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~ 323 (468)
.++||||+++|+|.+++.... ..+++..++.++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++
T Consensus 465 ~~lv~E~~~~g~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDikp~NILl~~~~~vkL~DFG~a~ 539 (656)
T 2j0j_A 465 VWIIMELCTLGELRSFLQVRK--FSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSR 539 (656)
T ss_dssp CEEEEECCTTCBHHHHHHHTT--TTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCCCC
T ss_pred eEEEEEcCCCCcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHH---hCCccccccchHhEEEeCCCCEEEEecCCCe
Confidence 899999999999999997543 34899999999999999999999 7799999999999999999999999999998
Q ss_pred cccCCCC-CceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCCCCCC
Q 012219 324 LLNFDSS-NRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDPRLSP 401 (468)
Q Consensus 324 ~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (468)
....... ......+++.|+|||++.+..++.++|||||||++|||++ |..||.......... .+..........
T Consensus 540 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~----~i~~~~~~~~~~ 615 (656)
T 2j0j_A 540 YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG----RIENGERLPMPP 615 (656)
T ss_dssp SCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHH----HHHHTCCCCCCT
T ss_pred ecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHH----HHHcCCCCCCCc
Confidence 7643222 1223456789999999998899999999999999999997 999997544321111 000101111122
Q ss_pred ccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhc
Q 012219 402 PVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIAR 442 (468)
Q Consensus 402 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~ 442 (468)
..+ ..+.+++.+||+.||++|||+.++++.|..+
T Consensus 616 ~~~-------~~l~~li~~~l~~dP~~RPs~~el~~~L~~i 649 (656)
T 2j0j_A 616 NCP-------PTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 649 (656)
T ss_dssp TCC-------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ccc-------HHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 121 1266799999999999999999999999875
No 233
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=4.1e-41 Score=335.60 Aligned_cols=257 Identities=25% Similarity=0.316 Sum_probs=189.1
Q ss_pred hCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeC------C
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHR------K 242 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~ 242 (468)
.+|.+.+.||+|+||.||+|+. .+|+.||||++..... .+.+|+++++.++||||+++++++... .
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~-------~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~ 126 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-------FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEV 126 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT-------SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch-------hHHHHHHHHHHcCCCCccceeeEEeccCCCCcce
Confidence 4688899999999999999986 4689999999975432 233799999999999999999988542 2
Q ss_pred EEEEEEEeccCCChhhhhhc-CcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCC-CCeEEeecc
Q 012219 243 CMFLIYEYMEMGSLFCVLRT-DEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSE-LEAFVADFG 320 (468)
Q Consensus 243 ~~~lv~e~~~~gsL~~~l~~-~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~-~~~kl~Dfg 320 (468)
..++||||+++ ++.+.+.. ......+++..+..++.||+.||+||| +.+|+||||||+|||++.+ +.+||+|||
T Consensus 127 ~~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NILl~~~~~~~kl~DFG 202 (420)
T 1j1b_A 127 YLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFG 202 (420)
T ss_dssp EEEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEEETTTTEEEECCCT
T ss_pred eEEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChhhEEEeCCCCeEEeccch
Confidence 36799999986 56555542 122345899999999999999999999 7899999999999999965 568999999
Q ss_pred ccccccCCCCCceeccccccccccccccCC-CCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhc------------
Q 012219 321 VARLLNFDSSNRTLLAGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDK------------ 387 (468)
Q Consensus 321 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~------------ 387 (468)
+++...... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||............
T Consensus 203 ~a~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~ 281 (420)
T 1j1b_A 203 SAKQLVRGE-PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 281 (420)
T ss_dssp TCEECCTTC-CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHH
T ss_pred hhhhcccCC-CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence 998764322 23345789999999998764 7999999999999999999999999754321110000
Q ss_pred ---ccccccccCCCCCCc-cchhH-HHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 388 ---NIKLIDLLDPRLSPP-VDQKI-RQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 388 ---~~~~~~~~~~~~~~~-~~~~~-~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
.....+..-+.+... ..... ......+.+++.+||+.||++|||+.|++++
T Consensus 282 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h 337 (420)
T 1j1b_A 282 REMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 337 (420)
T ss_dssp HHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence 000000000111100 00000 0001237789999999999999999999853
No 234
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=7.8e-41 Score=321.57 Aligned_cols=261 Identities=22% Similarity=0.279 Sum_probs=190.0
Q ss_pred hCccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEe---------
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCL--------- 239 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~--------- 239 (468)
++|.+.+.||+|+||.||+|... +++.||+|++...... ..+.+.+|++++++++||||+++++++.
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 87 (320)
T 2i6l_A 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQ---SVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDD 87 (320)
T ss_dssp TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHH---HHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC-
T ss_pred CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChH---HHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccc
Confidence 57899999999999999999765 5899999999765432 4567889999999999999999999874
Q ss_pred -----eCCEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeC-CCCC
Q 012219 240 -----HRKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLN-SELE 313 (468)
Q Consensus 240 -----~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~-~~~~ 313 (468)
.....++||||++ |+|.+++.. ..+++..++.++.|++.||+||| +.+|+||||||+||+++ .++.
T Consensus 88 ~~~~~~~~~~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~ 159 (320)
T 2i6l_A 88 VGSLTELNSVYIVQEYME-TDLANVLEQ----GPLLEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANLFINTEDLV 159 (320)
T ss_dssp ---CCSCSEEEEEEECCS-EEHHHHHTT----CCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTTE
T ss_pred cccccccCceeEEeeccC-CCHHHHhhc----CCccHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCe
Confidence 3467899999998 699999864 23889999999999999999999 77999999999999997 5679
Q ss_pred eEEeeccccccccCCC---CCceeccccccccccccccC-CCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcc-
Q 012219 314 AFVADFGVARLLNFDS---SNRTLLAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKN- 388 (468)
Q Consensus 314 ~kl~Dfg~~~~~~~~~---~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~- 388 (468)
+||+|||+++...... .......++..|+|||.+.+ ..++.++|||||||++|||+||+.||.............
T Consensus 160 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~ 239 (320)
T 2i6l_A 160 LKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILE 239 (320)
T ss_dssp EEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred EEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 9999999998764321 12233457899999998765 678999999999999999999999997543211100000
Q ss_pred ----------cccccc----cCCC---CCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH-HHh
Q 012219 389 ----------IKLIDL----LDPR---LSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE-FIA 441 (468)
Q Consensus 389 ----------~~~~~~----~~~~---~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~-l~~ 441 (468)
...... +... ...............+.+++.+||+.||++|||+++++++ +..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~ 310 (320)
T 2i6l_A 240 SIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMS 310 (320)
T ss_dssp HSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSHHHH
T ss_pred hcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCCcccc
Confidence 000000 0000 0000000000011237789999999999999999999853 444
No 235
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=1e-40 Score=322.03 Aligned_cols=255 Identities=24% Similarity=0.302 Sum_probs=175.7
Q ss_pred hCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHH-HHhhccCCceeeEEEEEeeCCEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEAR-LLSQIRHRNIVKLYGFCLHRKCMFLI 247 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~-~l~~l~h~niv~l~~~~~~~~~~~lv 247 (468)
++|.+.+.||+|+||.||+|.. .+|+.||||++....... ....+..|+. +++.++||||+++++++...+..++|
T Consensus 22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv 99 (327)
T 3aln_A 22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEK--EQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWIC 99 (327)
T ss_dssp CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHH--HHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCch--HHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEE
Confidence 6789999999999999999976 478999999997654332 2345555665 77788999999999999999999999
Q ss_pred EEeccCCChhhhhhcC--cccCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CeEecCCCCCceeeCCCCCeEEeecccccc
Q 012219 248 YEYMEMGSLFCVLRTD--EEAVGLDWAKRVNVVKGMCHALSYLHHDCTP-PIVHRDISSNNVLLNSELEAFVADFGVARL 324 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~--~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~-~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~ 324 (468)
|||+++ +|.+++... .....+++..+..++.|++.||.||| +. +|+||||||+||+++.++.+||+|||+++.
T Consensus 100 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~ 175 (327)
T 3aln_A 100 MELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLK---ENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQ 175 (327)
T ss_dssp ECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHH---HHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC
T ss_pred EeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHh---ccCCEeECCCCHHHEEEcCCCCEEEccCCCcee
Confidence 999985 887777531 11234899999999999999999999 66 999999999999999999999999999987
Q ss_pred ccCCCCCceeccccccccccccc----cCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCC
Q 012219 325 LNFDSSNRTLLAGTYGYIAPELA----YTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLS 400 (468)
Q Consensus 325 ~~~~~~~~~~~~g~~~y~aPE~~----~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (468)
.... .......|++.|+|||++ .+..++.++||||||+++|||++|+.||........... .......+.+.
T Consensus 176 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~---~~~~~~~~~~~ 251 (327)
T 3aln_A 176 LVDS-IAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLT---QVVKGDPPQLS 251 (327)
T ss_dssp -------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------C---CCCCSCCCCCC
T ss_pred cccc-cccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHH---HHhcCCCCCCC
Confidence 6432 222334689999999998 456789999999999999999999999975432111111 11111111111
Q ss_pred CccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 012219 401 PPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSN 437 (468)
Q Consensus 401 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~ 437 (468)
......... .+.+++.+||+.||++|||+.++++
T Consensus 252 ~~~~~~~~~---~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 252 NSEEREFSP---SFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp CCSSCCCCH---HHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CcccccCCH---HHHHHHHHHhhCChhhCcCHHHHHh
Confidence 111011111 2677999999999999999999985
No 236
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=4.8e-40 Score=324.24 Aligned_cols=200 Identities=25% Similarity=0.356 Sum_probs=170.9
Q ss_pred hhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhcc-CC-----ceeeEEEEEeeC
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIR-HR-----NIVKLYGFCLHR 241 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~-----niv~l~~~~~~~ 241 (468)
.++|.+.+.||+|+||.||+|.. .+++.||||++..... ....+..|+++++.++ |+ +++++++++...
T Consensus 53 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~ 128 (382)
T 2vx3_A 53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKA----FLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFR 128 (382)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSHH----HHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEET
T ss_pred eeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccHH----HHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccC
Confidence 47899999999999999999975 4688999999975432 2456778888888885 44 499999999999
Q ss_pred CEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeC--CCCCeEEeec
Q 012219 242 KCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLN--SELEAFVADF 319 (468)
Q Consensus 242 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~--~~~~~kl~Df 319 (468)
+..++||||+. |+|.+++..... ..+++..+..++.|++.||.|||.+ ..+|+||||||+|||++ .++.+||+||
T Consensus 129 ~~~~lv~e~~~-~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DF 205 (382)
T 2vx3_A 129 NHLCLVFEMLS-YNLYDLLRNTNF-RGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDF 205 (382)
T ss_dssp TEEEEEEECCC-CBHHHHHHHTTT-SCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCC
T ss_pred CceEEEEecCC-CCHHHHHhhcCc-CCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEec
Confidence 99999999996 599999976532 3489999999999999999999953 46999999999999995 4788999999
Q ss_pred cccccccCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcc
Q 012219 320 GVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELL 378 (468)
Q Consensus 320 g~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~ 378 (468)
|+++..... .....||+.|+|||++.+..++.++|||||||++|||+||+.||...
T Consensus 206 G~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 206 GSSCQLGQR---IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp TTCEETTCC---CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cCceecccc---cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 999876432 23457899999999999999999999999999999999999999754
No 237
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=9e-41 Score=334.57 Aligned_cols=250 Identities=23% Similarity=0.312 Sum_probs=183.9
Q ss_pred CccccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhc-cCCceeeEEEEEeeCCEEEEEEE
Q 012219 171 DFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQI-RHRNIVKLYGFCLHRKCMFLIYE 249 (468)
Q Consensus 171 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e 249 (468)
.|...+.||+|+||+||.+...+|+.||||++.... .+.+.+|++++.++ +||||+++++++.+.+..++|||
T Consensus 16 ~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~------~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E 89 (434)
T 2rio_A 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF------CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALE 89 (434)
T ss_dssp CEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGG------HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred eeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH------HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEe
Confidence 455568899999999987766689999999987543 24567899999886 89999999999999999999999
Q ss_pred eccCCChhhhhhcCcccC----CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCC-------------C
Q 012219 250 YMEMGSLFCVLRTDEEAV----GLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSE-------------L 312 (468)
Q Consensus 250 ~~~~gsL~~~l~~~~~~~----~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~-------------~ 312 (468)
|+. |+|.+++....... ...+..++.++.||+.||+||| +.+|+||||||+|||++.+ +
T Consensus 90 ~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~ 165 (434)
T 2rio_A 90 LCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENL 165 (434)
T ss_dssp CCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEECCHHHHSCCTTCCCSC
T ss_pred cCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCcccccccccCCCce
Confidence 996 69999997643211 1133345789999999999999 7799999999999999754 4
Q ss_pred CeEEeeccccccccCCCCC----ceeccccccccccccccC-------CCCCccchhhHHHHHHHHHHh-CCCCCCcccc
Q 012219 313 EAFVADFGVARLLNFDSSN----RTLLAGTYGYIAPELAYT-------MVVTEKCDVYSFGVVALEVLM-GKHPGELLSS 380 (468)
Q Consensus 313 ~~kl~Dfg~~~~~~~~~~~----~~~~~g~~~y~aPE~~~~-------~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~ 380 (468)
.+||+|||+++........ .....||+.|+|||++.+ ..++.++|||||||++|||+| |+.||.....
T Consensus 166 ~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~ 245 (434)
T 2rio_A 166 RILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYS 245 (434)
T ss_dssp EEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTT
T ss_pred EEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchh
Confidence 8999999999877543221 223579999999999865 578999999999999999999 9999975432
Q ss_pred cchhhhcccccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 012219 381 SSWSLDKNIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSN 437 (468)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~ 437 (468)
......... ... +........ .....+.+++.+||+.||++|||+.++++
T Consensus 246 ~~~~i~~~~--~~~--~~~~~~~~~---~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 246 RESNIIRGI--FSL--DEMKCLHDR---SLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp HHHHHHHTC--CCC--CCCTTCCCH---HHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hHHHHhcCC--CCc--ccccccccc---cchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 211111000 000 111111111 22234778999999999999999999985
No 238
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=2.8e-40 Score=322.52 Aligned_cols=259 Identities=24% Similarity=0.292 Sum_probs=193.7
Q ss_pred hCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCE-----
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKC----- 243 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~----- 243 (468)
++|.+.+.||+|+||.||+|.. .+|+.||||++...... ....+.+.+|+.+++.++||||+++++++.....
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQS-EIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSS-HHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccc-hHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 5788999999999999999975 57899999999764332 2345678899999999999999999999987653
Q ss_pred -EEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccc
Q 012219 244 -MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVA 322 (468)
Q Consensus 244 -~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~ 322 (468)
.++||||+. |+|.+++.. .+++.++..++.||+.||.||| +.+|+||||||+||+++.++.+||+|||++
T Consensus 103 ~~~lv~e~~~-~~l~~~~~~-----~~~~~~~~~i~~qi~~al~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~ 173 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMGL-----KFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLA 173 (353)
T ss_dssp CCEEEEECCS-EEGGGTTTS-----CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTCCEEECSTTCT
T ss_pred eEEEEecccc-CCHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEeECCCCcEEEeecccc
Confidence 499999997 588877742 3899999999999999999999 779999999999999999999999999999
Q ss_pred ccccCCCCCceeccccccccccccccC-CCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcc----c--------
Q 012219 323 RLLNFDSSNRTLLAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKN----I-------- 389 (468)
Q Consensus 323 ~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~----~-------- 389 (468)
+.... ......+|+.|+|||++.+ ..++.++|||||||++|||++|+.||............. .
T Consensus 174 ~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 250 (353)
T 3coi_A 174 RHADA---EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQK 250 (353)
T ss_dssp TC-----------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTT
T ss_pred cCCCC---CccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHH
Confidence 76542 2334578999999999876 678999999999999999999999997543211100000 0
Q ss_pred -------ccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH-HHh
Q 012219 390 -------KLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE-FIA 441 (468)
Q Consensus 390 -------~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~-l~~ 441 (468)
.....+..................+.+++.+||+.||++|||+.+++++ +.+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~ 310 (353)
T 3coi_A 251 LNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFE 310 (353)
T ss_dssp CSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGT
T ss_pred HhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchh
Confidence 0000000000000000000111237789999999999999999999854 443
No 239
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=2.4e-40 Score=318.00 Aligned_cols=254 Identities=22% Similarity=0.314 Sum_probs=178.7
Q ss_pred hhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLI 247 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 247 (468)
.++|.+.+.||+|+||.||+|.. .+|+.||||++....... ...+.+.++..+++.++||||+++++++...+..++|
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv 102 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKE-ENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIA 102 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHH-HHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccch-HHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEE
Confidence 46789999999999999999976 478999999998654432 2234455556678888999999999999999999999
Q ss_pred EEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CeEecCCCCCceeeCCCCCeEEeecccccccc
Q 012219 248 YEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTP-PIVHRDISSNNVLLNSELEAFVADFGVARLLN 326 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~-~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~ 326 (468)
|||+ ++.+..+.... ...+++..++.++.|++.||.||| +. +|+||||||+||+++.++.+||+|||+++...
T Consensus 103 ~e~~-~~~~~~l~~~~--~~~~~~~~~~~~~~~i~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 176 (318)
T 2dyl_A 103 MELM-GTCAEKLKKRM--QGPIPERILGKMTVAIVKALYYLK---EKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLV 176 (318)
T ss_dssp ECCC-SEEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHH---HHHCCCCCCCCGGGEEECTTSCEEECCCTTC----
T ss_pred Eecc-CCcHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHH---hhCCEEeCCCCHHHEEECCCCCEEEEECCCchhcc
Confidence 9999 45555554432 234899999999999999999999 53 89999999999999999999999999997664
Q ss_pred CCCCCceecccccccccccccc-----CCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCC
Q 012219 327 FDSSNRTLLAGTYGYIAPELAY-----TMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSP 401 (468)
Q Consensus 327 ~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (468)
.. .......|++.|+|||++. ...++.++||||||+++|||++|+.||............ ......+....
T Consensus 177 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~---~~~~~~~~~~~ 252 (318)
T 2dyl_A 177 DD-KAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTK---VLQEEPPLLPG 252 (318)
T ss_dssp -----------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHH---HHHSCCCCCCS
T ss_pred CC-ccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHH---HhccCCCCCCc
Confidence 32 2233456899999999984 456889999999999999999999999754322111111 00111111111
Q ss_pred ccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 402 PVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 402 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
.. .... .+.+++.+||+.||.+|||+++++++
T Consensus 253 ~~--~~~~---~l~~li~~~l~~dp~~Rps~~~ll~h 284 (318)
T 2dyl_A 253 HM--GFSG---DFQSFVKDCLTKDHRKRPKYNKLLEH 284 (318)
T ss_dssp SS--CCCH---HHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred cC--CCCH---HHHHHHHHHccCChhHCcCHHHHhhC
Confidence 00 0111 26679999999999999999999853
No 240
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.6e-40 Score=330.46 Aligned_cols=247 Identities=23% Similarity=0.328 Sum_probs=184.5
Q ss_pred hCccccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhc-cCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQI-RHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 248 (468)
.+|...+.||+|+||+||.....+++.||||++...... .+.+|+++++.+ +||||+++++++.+....++||
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~------~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~ 97 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFS------FADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAI 97 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEE------ECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEE
T ss_pred EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHH------HHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEE
Confidence 468888999999999976555568999999999754332 245799999999 7999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCC-----CCCeEEeeccccc
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNS-----ELEAFVADFGVAR 323 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~-----~~~~kl~Dfg~~~ 323 (468)
||+. |+|.+++...... ..+..++.++.||+.||.||| +.+|+||||||+||+++. ...+||+|||+++
T Consensus 98 E~~~-g~L~~~l~~~~~~--~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~ 171 (432)
T 3p23_A 98 ELCA-ATLQEYVEQKDFA--HLGLEPITLLQQTTSGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCK 171 (432)
T ss_dssp ECCS-EEHHHHHHSSSCC--CCSSCHHHHHHHHHHHHHHHH---HTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEE
T ss_pred ECCC-CCHHHHHHhcCCC--ccchhHHHHHHHHHHHHHHHH---HCcCEeCCCCHHHEEEecCCCCCceeEEEeccccee
Confidence 9996 5999999765432 444556789999999999999 779999999999999953 3467899999998
Q ss_pred cccCCC---CCceecccccccccccccc---CCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccC
Q 012219 324 LLNFDS---SNRTLLAGTYGYIAPELAY---TMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLD 396 (468)
Q Consensus 324 ~~~~~~---~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 396 (468)
...... .......||+.|+|||++. ...++.++|||||||++|||+| |+.||............... ..
T Consensus 172 ~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~~~~~~----~~ 247 (432)
T 3p23_A 172 KLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGAC----SL 247 (432)
T ss_dssp CC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHHHTTCC----CC
T ss_pred eccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHHHhccC----Cc
Confidence 765332 2233457999999999987 4567889999999999999999 99998643322111110000 00
Q ss_pred CCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 012219 397 PRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSN 437 (468)
Q Consensus 397 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~ 437 (468)
...... . .....+.+++.+||+.||++|||+.++++
T Consensus 248 ~~~~~~-~----~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 248 DCLHPE-K----HEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp TTSCTT-C----HHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cccCcc-c----cccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 011111 1 11223668999999999999999999984
No 241
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=9.3e-40 Score=318.71 Aligned_cols=198 Identities=24% Similarity=0.364 Sum_probs=169.4
Q ss_pred hCccccceeeeeCCceEEEEEcC-CC-CEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCc------eeeEEEEEeeC
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLP-SG-KVVALKKLHRSETEELASLESFGNEARLLSQIRHRN------IVKLYGFCLHR 241 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~-~~-~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n------iv~l~~~~~~~ 241 (468)
++|.+.+.||+|+||.||+|... ++ +.||+|++..... ..+.+.+|+++++.++|++ ++.+++++...
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 94 (355)
T 2eu9_A 19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGK----YREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFH 94 (355)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHH----HHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEET
T ss_pred ccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccccc----chhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeC
Confidence 67999999999999999999753 34 6899999975432 2457788999999998766 99999999999
Q ss_pred CEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee-------------
Q 012219 242 KCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLL------------- 308 (468)
Q Consensus 242 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll------------- 308 (468)
+..++||||+ ++++.+++..... ..+++.+++.++.||+.||+||| +.+|+||||||+|||+
T Consensus 95 ~~~~lv~e~~-~~~l~~~l~~~~~-~~~~~~~~~~i~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~ 169 (355)
T 2eu9_A 95 GHMCIAFELL-GKNTFEFLKENNF-QPYPLPHVRHMAYQLCHALRFLH---ENQLTHTDLKPENILFVNSEFETLYNEHK 169 (355)
T ss_dssp TEEEEEEECC-CCBHHHHHHHTTT-CCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEESCCCEEEEECCC-
T ss_pred CeEEEEEecc-CCChHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEecccccccccccc
Confidence 9999999999 6677777765432 34899999999999999999999 7899999999999999
Q ss_pred ------CCCCCeEEeeccccccccCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCccc
Q 012219 309 ------NSELEAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLS 379 (468)
Q Consensus 309 ------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~ 379 (468)
+.++.+||+|||+++.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 170 ~~~~~~~~~~~~kl~Dfg~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 243 (355)
T 2eu9_A 170 SCEEKSVKNTSIRVADFGSATFDHE---HHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHE 243 (355)
T ss_dssp CCCEEEESCCCEEECCCTTCEETTS---CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred cccccccCCCcEEEeecCccccccc---cccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Confidence 5678999999999986532 2234578999999999999999999999999999999999999997543
No 242
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=8.3e-41 Score=321.70 Aligned_cols=244 Identities=23% Similarity=0.332 Sum_probs=196.7
Q ss_pred hhCccccceeeeeCCceEEEEE-cCCCCEEEEEEecCcchhhh---hhHHHHHHHHHHHhhcc--CCceeeEEEEEeeCC
Q 012219 169 TEDFHIKYCIGTGGYGSVYRAR-LPSGKVVALKKLHRSETEEL---ASLESFGNEARLLSQIR--HRNIVKLYGFCLHRK 242 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~---~~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~~ 242 (468)
.++|.+.+.||+|+||.||+|. ..+++.||||++........ ...+.+.+|+.++++++ |+||+++++++...+
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~ 121 (320)
T 3a99_A 42 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPD 121 (320)
T ss_dssp TTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSS
T ss_pred cCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCC
Confidence 4679999999999999999996 46789999999976533210 11234668999999996 599999999999999
Q ss_pred EEEEEEEeccC-CChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeC-CCCCeEEeecc
Q 012219 243 CMFLIYEYMEM-GSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLN-SELEAFVADFG 320 (468)
Q Consensus 243 ~~~lv~e~~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~-~~~~~kl~Dfg 320 (468)
..++|+|++.+ ++|.+++.... .+++..++.++.||+.||+||| +.+|+||||||+||+++ +++.+||+|||
T Consensus 122 ~~~lv~e~~~~~~~L~~~l~~~~---~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg 195 (320)
T 3a99_A 122 SFVLILERPEPVQDLFDFITERG---ALQEELARSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFG 195 (320)
T ss_dssp EEEEEEECCSSEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCCT
T ss_pred cEEEEEEcCCCCccHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHH---HCCcEeCCCCHHHEEEeCCCCCEEEeeCc
Confidence 99999999986 89999987643 3899999999999999999999 77999999999999999 77999999999
Q ss_pred ccccccCCCCCceeccccccccccccccCCCC-CccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCC
Q 012219 321 VARLLNFDSSNRTLLAGTYGYIAPELAYTMVV-TEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRL 399 (468)
Q Consensus 321 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (468)
+++.... .......||+.|+|||++.+..+ +.++||||||+++|||+||+.||...... ... . ...
T Consensus 196 ~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~---~~~----~----~~~ 262 (320)
T 3a99_A 196 SGALLKD--TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI---IRG----Q----VFF 262 (320)
T ss_dssp TCEECCS--SCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHH---HHC----C----CCC
T ss_pred ccccccc--ccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhhh---hcc----c----ccc
Confidence 9987643 22334568999999999877665 67899999999999999999998743210 000 0 011
Q ss_pred CCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 400 SPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 400 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
...... .+.+++.+||+.||++|||+++++++
T Consensus 263 ~~~~~~-------~~~~li~~~l~~dp~~Rps~~~ll~h 294 (320)
T 3a99_A 263 RQRVSS-------ECQHLIRWCLALRPSDRPTFEEIQNH 294 (320)
T ss_dssp SSCCCH-------HHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred cccCCH-------HHHHHHHHHccCChhhCcCHHHHhcC
Confidence 111111 26679999999999999999999864
No 243
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.8e-40 Score=318.20 Aligned_cols=247 Identities=22% Similarity=0.336 Sum_probs=190.0
Q ss_pred HHHhhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhh---hhHHHHHHHHHHHhhc----cCCceeeEEEE
Q 012219 166 IEATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEEL---ASLESFGNEARLLSQI----RHRNIVKLYGF 237 (468)
Q Consensus 166 ~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~---~~~~~~~~e~~~l~~l----~h~niv~l~~~ 237 (468)
....++|.+.+.||+|+||.||+|.. .+++.||||++........ .....+.+|++++.++ +|+||++++++
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~ 106 (312)
T 2iwi_A 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW 106 (312)
T ss_dssp ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence 34457899999999999999999975 5789999999976543211 1223456799999998 89999999999
Q ss_pred EeeCCEEEEEEEe-ccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeC-CCCCeE
Q 012219 238 CLHRKCMFLIYEY-MEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLN-SELEAF 315 (468)
Q Consensus 238 ~~~~~~~~lv~e~-~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~-~~~~~k 315 (468)
+...+..++|+|| +.+++|.+++.... .+++..++.++.||+.||.||| +.+|+||||||+||+++ .++.+|
T Consensus 107 ~~~~~~~~~v~e~~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~k 180 (312)
T 2iwi_A 107 FETQEGFMLVLERPLPAQDLFDYITEKG---PLGEGPSRCFFGQVVAAIQHCH---SRGVVHRDIKDENILIDLRRGCAK 180 (312)
T ss_dssp C-----CEEEEECCSSEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHH---HHTEECCCCSGGGEEEETTTTEEE
T ss_pred EecCCeEEEEEEecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChhhEEEeCCCCeEE
Confidence 9998999999999 78999999997643 3899999999999999999999 67999999999999999 889999
Q ss_pred EeeccccccccCCCCCceeccccccccccccccCCCCC-ccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccc
Q 012219 316 VADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVT-EKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDL 394 (468)
Q Consensus 316 l~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~-~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 394 (468)
|+|||+++..... ......|+..|+|||++.+..+. .++||||||+++|||++|+.||...... ...
T Consensus 181 l~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---~~~------- 248 (312)
T 2iwi_A 181 LIDFGSGALLHDE--PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEI---LEA------- 248 (312)
T ss_dssp ECCCSSCEECCSS--CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHH---HHT-------
T ss_pred EEEcchhhhcccC--cccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHHH---hhh-------
Confidence 9999999876532 23345689999999998776664 5899999999999999999998743210 000
Q ss_pred cCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 395 LDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
...+...... .+.+++.+||+.||++|||+.+++++
T Consensus 249 -~~~~~~~~~~-------~~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 249 -ELHFPAHVSP-------DCCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp -CCCCCTTSCH-------HHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred -ccCCcccCCH-------HHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0111111111 26679999999999999999999964
No 244
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=2.3e-40 Score=325.49 Aligned_cols=257 Identities=21% Similarity=0.314 Sum_probs=193.8
Q ss_pred hCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhcc-----------CCceeeEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIR-----------HRNIVKLYGF 237 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-----------h~niv~l~~~ 237 (468)
++|.+.+.||+|+||.||+|.. .+++.||||++..... ..+.+.+|++++++++ |+||++++++
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~ 94 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKV----YTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDH 94 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHH----HHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCcc----chhhhhHHHHHHHHhhcccccchhccccchHHHHHHH
Confidence 5799999999999999999975 5789999999976443 2356778999998886 8999999999
Q ss_pred EeeCC----EEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CeEecCCCCCceeeC---
Q 012219 238 CLHRK----CMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTP-PIVHRDISSNNVLLN--- 309 (468)
Q Consensus 238 ~~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~-~ivH~dlk~~NIll~--- 309 (468)
+...+ ..++||||+ +++|.+++..... ..+++..+..++.||+.||+||| +. +|+||||||+|||++
T Consensus 95 ~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~-~~~~~~~~~~i~~qi~~aL~~lH---~~~~ivH~Dikp~NIll~~~~ 169 (373)
T 1q8y_A 95 FNHKGPNGVHVVMVFEVL-GENLLALIKKYEH-RGIPLIYVKQISKQLLLGLDYMH---RRCGIIHTDIKPENVLMEIVD 169 (373)
T ss_dssp EEEEETTEEEEEEEECCC-CEEHHHHHHHTTT-SCCCHHHHHHHHHHHHHHHHHHH---HTTCEECSCCSGGGEEEEEEE
T ss_pred hhccCCCCceEEEEEecC-CCCHHHHHHHhhc-cCCcHHHHHHHHHHHHHHHHHHH---hcCCEEecCCChHHeEEeccC
Confidence 88654 789999999 8899999976432 34899999999999999999999 66 999999999999994
Q ss_pred ---CCCCeEEeeccccccccCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhh-
Q 012219 310 ---SELEAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSL- 385 (468)
Q Consensus 310 ---~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~- 385 (468)
.++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||+||+.||..........
T Consensus 170 ~~~~~~~~kl~Dfg~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~ 246 (373)
T 1q8y_A 170 SPENLIQIKIADLGNACWYDEH---YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKD 246 (373)
T ss_dssp TTTTEEEEEECCCTTCEETTBC---CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CH
T ss_pred CCcCcceEEEcccccccccCCC---CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCCh
Confidence 4458999999999876432 233478999999999999999999999999999999999999997543211100
Q ss_pred -hcccccccc------------------------cCCCCCC---ccch-------hHHHHHHHHHHHHHhcccCCCCCCC
Q 012219 386 -DKNIKLIDL------------------------LDPRLSP---PVDQ-------KIRQDIILVSTVAFSCLRSQPKSRP 430 (468)
Q Consensus 386 -~~~~~~~~~------------------------~~~~~~~---~~~~-------~~~~~~~~l~~l~~~cl~~dP~~RP 430 (468)
.....+.+. ....... +... ........+.+++.+||+.||++||
T Consensus 247 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp 326 (373)
T 1q8y_A 247 DDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRA 326 (373)
T ss_dssp HHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCB
T ss_pred HHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccC
Confidence 000000000 0000000 0000 0012334578899999999999999
Q ss_pred CHHHHHHH
Q 012219 431 TMQLVSNE 438 (468)
Q Consensus 431 s~~~v~~~ 438 (468)
|+.+++++
T Consensus 327 t~~ell~h 334 (373)
T 1q8y_A 327 DAGGLVNH 334 (373)
T ss_dssp CHHHHHTC
T ss_pred CHHHHhhC
Confidence 99999964
No 245
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=4e-39 Score=304.59 Aligned_cols=235 Identities=13% Similarity=0.051 Sum_probs=184.0
Q ss_pred hCccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
++|.+.+.||+|+||.||+|... +++.||||++...........+.|.+|+..+.+++||||+++++++...+..++||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 57999999999999999999764 58999999998765543345678999999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||+++++|.+++... ....++..++.|++.||+||| +.+|+||||||+||+++.++.+||+++|
T Consensus 111 e~~~g~~L~~~l~~~-----~~~~~~~~i~~ql~~aL~~lH---~~givH~Dikp~NIll~~~g~~kl~~~~-------- 174 (286)
T 3uqc_A 111 EWIRGGSLQEVADTS-----PSPVGAIRAMQSLAAAADAAH---RAGVALSIDHPSRVRVSIDGDVVLAYPA-------- 174 (286)
T ss_dssp ECCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEETTSCEEECSCC--------
T ss_pred EecCCCCHHHHHhcC-----CChHHHHHHHHHHHHHHHHHH---HCCCccCCCCcccEEEcCCCCEEEEecc--------
Confidence 999999999998542 355678899999999999999 7799999999999999999999997543
Q ss_pred CCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHH
Q 012219 329 SSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIR 408 (468)
Q Consensus 329 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (468)
|++| ++.++|||||||++|||+||+.||........... ........... ......
T Consensus 175 ------------~~~~-------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~----~~~~~~~~~~~-~~~~~~ 230 (286)
T 3uqc_A 175 ------------TMPD-------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAP----AERDTAGQPIE-PADIDR 230 (286)
T ss_dssp ------------CCTT-------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEE----CCBCTTSCBCC-HHHHCT
T ss_pred ------------ccCC-------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHH----HHHHhccCCCC-hhhccc
Confidence 3333 67899999999999999999999975433211000 00000000000 000000
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCCC
Q 012219 409 QDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNKA 445 (468)
Q Consensus 409 ~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~~ 445 (468)
.....+.+++.+||+.||++| |+.++++.|.+....
T Consensus 231 ~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~ 266 (286)
T 3uqc_A 231 DIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAV 266 (286)
T ss_dssp TSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC-
T ss_pred CCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhcc
Confidence 011226789999999999999 999999999987654
No 246
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=3.6e-40 Score=340.03 Aligned_cols=257 Identities=26% Similarity=0.333 Sum_probs=195.3
Q ss_pred hhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEee------C
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLH------R 241 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~------~ 241 (468)
.++|.+.+.||+|+||.||+|.. .+|+.||||++...... ...+.|.+|++++++++||||+++++++.. .
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~--~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~ 90 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSP--KNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPN 90 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCH--HHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTT
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCH--HHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCC
Confidence 36899999999999999999975 56899999998765332 345678999999999999999999999765 6
Q ss_pred CEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCC---eEEee
Q 012219 242 KCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELE---AFVAD 318 (468)
Q Consensus 242 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~---~kl~D 318 (468)
+..++||||+++|+|.+++........+++..++.++.|++.||+||| +.+|+||||||+||+++.++. +||+|
T Consensus 91 ~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLH---s~gIVHrDLKP~NILl~~~g~~~~vKL~D 167 (676)
T 3qa8_A 91 DLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIID 167 (676)
T ss_dssp SSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHH---HTTBCCCCCCSTTEEEECCSSSCEEEECS
T ss_pred CeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEeecCCCceeEEEcc
Confidence 678999999999999999987665556889999999999999999999 779999999999999997765 89999
Q ss_pred ccccccccCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccc-hhh------hccccc
Q 012219 319 FGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSS-WSL------DKNIKL 391 (468)
Q Consensus 319 fg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~-~~~------~~~~~~ 391 (468)
||+++..... .......|++.|+|||++.+..++.++|||||||++|||++|+.||....... +.. ......
T Consensus 168 FG~a~~~~~~-~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~ 246 (676)
T 3qa8_A 168 LGYAKELDQG-ELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVV 246 (676)
T ss_dssp CCCCCBTTSC-CCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCS
T ss_pred cccccccccc-cccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhh
Confidence 9999876533 23344679999999999999999999999999999999999999986431110 000 000000
Q ss_pred cccc------CCCC--CCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHH
Q 012219 392 IDLL------DPRL--SPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQL 434 (468)
Q Consensus 392 ~~~~------~~~~--~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~ 434 (468)
.+.. .... ......... ..+.+++.+||..||++|||+.+
T Consensus 247 ~~~l~g~~~~~~~lp~p~~l~~~ls---~~L~dLI~~mL~~DP~kRPTa~e 294 (676)
T 3qa8_A 247 YDDLTGAVKFSSVLPTPNHLSGILA---GKLERWLQCMLMWHQRQRGTDPQ 294 (676)
T ss_dssp CCCCSSSCCCCSSSCCSCCCCGGGH---HHHHHHHHHHSCSSCC---CCTT
T ss_pred hhhhccccccccccCCchhhchhhh---HHHHHHHHHHccCCHhhCcCHHH
Confidence 0000 0000 111112222 23778999999999999999976
No 247
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=6.4e-39 Score=338.85 Aligned_cols=238 Identities=24% Similarity=0.332 Sum_probs=190.7
Q ss_pred hCccccceeeeeCCceEEEEEcC--CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCE----
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLP--SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKC---- 243 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~---- 243 (468)
++|.+.+.||+|+||.||+|... +++.||||++...... ...+.|.+|++++.+++||||+++++++...+.
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 157 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDA--EAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDP 157 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCH--HHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCH--HHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCc
Confidence 68999999999999999999764 6899999999754332 235678899999999999999999999987554
Q ss_pred -EEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccc
Q 012219 244 -MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVA 322 (468)
Q Consensus 244 -~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~ 322 (468)
.++||||+++++|.+++.. .+++.+++.++.||+.||.||| +.+|+||||||+|||++.+ .+||+|||++
T Consensus 158 ~~~lv~E~~~g~~L~~~~~~-----~l~~~~~~~~~~qi~~aL~~lH---~~giiHrDlkp~NIll~~~-~~kl~DFG~a 228 (681)
T 2pzi_A 158 VGYIVMEYVGGQSLKRSKGQ-----KLPVAEAIAYLLEILPALSYLH---SIGLVYNDLKPENIMLTEE-QLKLIDLGAV 228 (681)
T ss_dssp EEEEEEECCCCEECC----C-----CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECSS-CEEECCCTTC
T ss_pred eeEEEEEeCCCCcHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHH---HCCCeecccChHHeEEeCC-cEEEEecccc
Confidence 7999999999999887754 4899999999999999999999 7799999999999999986 8999999999
Q ss_pred ccccCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCc
Q 012219 323 RLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPP 402 (468)
Q Consensus 323 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (468)
+..... ....||+.|+|||++.+.. +.++|||||||++|||++|..|+...... . +...
T Consensus 229 ~~~~~~----~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~-----------~-----~~~~ 287 (681)
T 2pzi_A 229 SRINSF----GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVD-----------G-----LPED 287 (681)
T ss_dssp EETTCC----SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECS-----------S-----CCTT
T ss_pred hhcccC----CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCcccccc-----------c-----cccc
Confidence 876432 3456999999999887654 88999999999999999999887532110 0 0000
Q ss_pred cchhHHHHHHHHHHHHHhcccCCCCCCCC-HHHHHHHHHh
Q 012219 403 VDQKIRQDIILVSTVAFSCLRSQPKSRPT-MQLVSNEFIA 441 (468)
Q Consensus 403 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-~~~v~~~l~~ 441 (468)
. ........+.+++.+||+.||++||+ ++++.+.|..
T Consensus 288 ~--~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~ 325 (681)
T 2pzi_A 288 D--PVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTG 325 (681)
T ss_dssp C--HHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred c--cccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHH
Confidence 0 01111234778999999999999995 5777776654
No 248
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=2.9e-38 Score=300.98 Aligned_cols=231 Identities=23% Similarity=0.343 Sum_probs=175.5
Q ss_pred hCcccc-ceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHH-hhccCCceeeEEEEEee----CC
Q 012219 170 EDFHIK-YCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLL-SQIRHRNIVKLYGFCLH----RK 242 (468)
Q Consensus 170 ~~~~~~-~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l-~~l~h~niv~l~~~~~~----~~ 242 (468)
++|.+. +.||+|+||.||+|.. .+++.||+|++... ..+.+|++++ +..+||||+++++++.. ..
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 88 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------PKARREVELHWRASQCPHIVRIVDVYENLYAGRK 88 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS--------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc--------HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCc
Confidence 567776 7799999999999975 57899999999643 2455788887 55689999999999876 67
Q ss_pred EEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCC---CCCeEEeec
Q 012219 243 CMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNS---ELEAFVADF 319 (468)
Q Consensus 243 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~---~~~~kl~Df 319 (468)
..++||||+++|+|.+++..... ..+++..++.++.|++.||.||| +.+|+||||||+||+++. ++.+||+||
T Consensus 89 ~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~kl~Df 164 (299)
T 3m2w_A 89 CLLIVMECLDGGELFSRIQDRGD-QAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDF 164 (299)
T ss_dssp EEEEEECCCCSCBHHHHHHHCTT-CCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCC
T ss_pred eEEEEEeecCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEecCCCCCcEEEecc
Confidence 78999999999999999986432 34899999999999999999999 779999999999999998 789999999
Q ss_pred cccccccCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCC
Q 012219 320 GVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRL 399 (468)
Q Consensus 320 g~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (468)
|++.... +..++.++|||||||++|||+||+.||............. . .......
T Consensus 165 g~a~~~~----------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~-~--~~~~~~~ 219 (299)
T 3m2w_A 165 GFAKETT----------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMK-T--RIRMGQY 219 (299)
T ss_dssp TTCEECT----------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSC-C--SSCTTCC
T ss_pred ccccccc----------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHH-H--HHhhccc
Confidence 9986532 2346789999999999999999999996543221110000 0 0000001
Q ss_pred CCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 400 SPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 400 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
..+ ..........+.+++.+||+.||++|||+.+++++
T Consensus 220 ~~~-~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 220 EFP-NPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp SSC-HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cCC-chhcccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 000 00000111237789999999999999999999953
No 249
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=1.3e-38 Score=316.84 Aligned_cols=244 Identities=15% Similarity=0.143 Sum_probs=178.6
Q ss_pred hCccccceeeeeCCceEEEEE-cCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccC-Cce---------e------
Q 012219 170 EDFHIKYCIGTGGYGSVYRAR-LPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRH-RNI---------V------ 232 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~ni---------v------ 232 (468)
..|...+.||+|+||.||+|. ..+|+.||||++...........+.|.+|+.++..++| +|. +
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 157 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 157 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence 457788999999999999997 56799999999985554444456789999999999987 221 1
Q ss_pred e------EEEEEee-----CCEEEEEEEeccCCChhhhhhc----CcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeE
Q 012219 233 K------LYGFCLH-----RKCMFLIYEYMEMGSLFCVLRT----DEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIV 297 (468)
Q Consensus 233 ~------l~~~~~~-----~~~~~lv~e~~~~gsL~~~l~~----~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iv 297 (468)
. ++.++.. ....+++|+++ +++|.+++.. ......+++..++.++.||+.||+||| +.+|+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ii 233 (413)
T 3dzo_A 158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGLV 233 (413)
T ss_dssp ECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH---HTTEE
T ss_pred ccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHH---hCCcc
Confidence 1 1111111 12356777765 5799988852 112334788899999999999999999 77999
Q ss_pred ecCCCCCceeeCCCCCeEEeeccccccccCCCCCceeccccccccccccc----------cCCCCCccchhhHHHHHHHH
Q 012219 298 HRDISSNNVLLNSELEAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELA----------YTMVVTEKCDVYSFGVVALE 367 (468)
Q Consensus 298 H~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~----------~~~~~~~~~Dv~s~Gvil~e 367 (468)
||||||+|||++.++.+||+|||+++..... .....| +.|+|||++ ....++.++|||||||++||
T Consensus 234 HrDiKp~NILl~~~~~~kL~DFG~a~~~~~~---~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~e 309 (413)
T 3dzo_A 234 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS---AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYW 309 (413)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETTEE---ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHH
T ss_pred cCCcccceEEEecCCeEEEEeccceeecCCc---cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHH
Confidence 9999999999999999999999999765422 334567 999999998 55678899999999999999
Q ss_pred HHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 012219 368 VLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSN 437 (468)
Q Consensus 368 l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~ 437 (468)
|+||+.||......... ...+... ...+ ..+.+++.+||+.||++||++.++++
T Consensus 310 lltg~~Pf~~~~~~~~~-------~~~~~~~--~~~~-------~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 310 IWCADLPNTDDAALGGS-------EWIFRSC--KNIP-------QPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp HHHSSCCCCTTGGGSCS-------GGGGSSC--CCCC-------HHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHCCCCCCCcchhhhH-------HHHHhhc--ccCC-------HHHHHHHHHHccCChhhCcCHHHHHh
Confidence 99999999754321110 0111100 1111 12677999999999999999877653
No 250
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=3.6e-38 Score=305.44 Aligned_cols=246 Identities=16% Similarity=0.156 Sum_probs=184.0
Q ss_pred hhCccccceeeeeCCceEEEEEcCCCCEEEEEEecCcchh-----hhhhHHHHHHHHHHHhhcc---------CCceeeE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETE-----ELASLESFGNEARLLSQIR---------HRNIVKL 234 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~~~e~~~l~~l~---------h~niv~l 234 (468)
.++|.+.+.||+|+||.||+|+. +|+.||||++...... .....+.+.+|+++++.++ ||||+++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 36789999999999999999988 6899999999865321 1223467889999998886 8888888
Q ss_pred EEEEe------------------------------eCCEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHH
Q 012219 235 YGFCL------------------------------HRKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHA 284 (468)
Q Consensus 235 ~~~~~------------------------------~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~ 284 (468)
.+.+. ..+..++||||+++|++.+.+.. ..+++..+..++.||+.|
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~----~~~~~~~~~~i~~qi~~a 173 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT----KLSSLATAKSILHQLTAS 173 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT----TCCCHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh----cCCCHHHHHHHHHHHHHH
Confidence 77643 26789999999999987776643 237999999999999999
Q ss_pred HHHHHhcCCCCeEecCCCCCceeeCCCC--------------------CeEEeeccccccccCCCCCceecccccccccc
Q 012219 285 LSYLHHDCTPPIVHRDISSNNVLLNSEL--------------------EAFVADFGVARLLNFDSSNRTLLAGTYGYIAP 344 (468)
Q Consensus 285 l~~LH~~~~~~ivH~dlk~~NIll~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aP 344 (468)
|+|||+ +.+|+||||||+|||++.++ .+||+|||+++..... ...||+.|+||
T Consensus 174 L~~lH~--~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-----~~~gt~~y~aP 246 (336)
T 2vuw_A 174 LAVAEA--SLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-----IVVFCDVSMDE 246 (336)
T ss_dssp HHHHHH--HHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-----EEECCCCTTCS
T ss_pred HHHHHH--hCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-----cEEEeecccCh
Confidence 999993 24899999999999999887 8999999999876522 34799999999
Q ss_pred ccccCCCCCccchhhHHHHH-HHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHHHHHHHHHHHHHhccc
Q 012219 345 ELAYTMVVTEKCDVYSFGVV-ALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLR 423 (468)
Q Consensus 345 E~~~~~~~~~~~Dv~s~Gvi-l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~ 423 (468)
|++.+.. +.++||||+|++ .+++++|..||....+............ ........ .........+.+++.+||+
T Consensus 247 E~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~s~~~~dli~~~L~ 321 (336)
T 2vuw_A 247 DLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQM-TFKTKCNT---PAMKQIKRKIQEFHRTMLN 321 (336)
T ss_dssp GGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTC-CCSSCCCS---HHHHHHHHHHHHHHHHGGG
T ss_pred hhhcCCC-ccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhh-ccCcccch---hhhhhcCHHHHHHHHHHhc
Confidence 9998766 889999998776 7888899999864221111111000000 01111111 1122233458889999999
Q ss_pred CCCCCCCCHHHHH
Q 012219 424 SQPKSRPTMQLVS 436 (468)
Q Consensus 424 ~dP~~RPs~~~v~ 436 (468)
.| |++|++
T Consensus 322 ~d-----sa~e~l 329 (336)
T 2vuw_A 322 FS-----SATDLL 329 (336)
T ss_dssp SS-----SHHHHH
T ss_pred cC-----CHHHHH
Confidence 76 998887
No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.97 E-value=8.3e-32 Score=277.09 Aligned_cols=187 Identities=19% Similarity=0.099 Sum_probs=132.7
Q ss_pred eeeeCCceEEEEE-cCCCCEEEEEEecCcc-------hhhhhhHHHHHHHHHHHhhc-cCCceeeEEEEEeeCCEEEEEE
Q 012219 178 IGTGGYGSVYRAR-LPSGKVVALKKLHRSE-------TEELASLESFGNEARLLSQI-RHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 178 lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~-------~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 248 (468)
.+.|++|.+..++ .--|+.+++|++.... .......++|.+|+++|+++ .|+||+++++++.+++..||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 4455555555442 3357889999997542 12223457899999999999 6999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||++|++|.+.+...+. ++.. +|+.||+.||+|+| +.|||||||||+|||++.++.+||+|||+|+.....
T Consensus 322 Eyv~G~~L~d~i~~~~~---l~~~---~I~~QIl~AL~ylH---~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~ 392 (569)
T 4azs_A 322 EKLPGRLLSDMLAAGEE---IDRE---KILGSLLRSLAALE---KQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQD 392 (569)
T ss_dssp ECCCSEEHHHHHHTTCC---CCHH---HHHHHHHHHHHHHH---HTTCEESCCCGGGEEECTTSCEEECCCTTEESCC--
T ss_pred ecCCCCcHHHHHHhCCC---CCHH---HHHHHHHHHHHHHH---HCCceeccCchHhEEECCCCCEEEeecccCeeCCCC
Confidence 99999999999986543 5543 58899999999999 789999999999999999999999999999987665
Q ss_pred CCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCC
Q 012219 329 SSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHP 374 (468)
Q Consensus 329 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p 374 (468)
.......+||+.|+|||++.+ .+..++|+||+|++++++.++..|
T Consensus 393 ~~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 393 CSWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp -CCSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred CccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 555666789999999999875 466789999999998887665444
No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.95 E-value=2.1e-28 Score=250.45 Aligned_cols=187 Identities=16% Similarity=0.203 Sum_probs=146.4
Q ss_pred cccceeeeeCCceEEEEEcCCCCEEEEEEecCcch-----hhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEE
Q 012219 173 HIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSET-----EELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLI 247 (468)
Q Consensus 173 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 247 (468)
...+.||+|+||.||+|.. .++.+++|+...... ......+.|.+|++++++++||||+++..++...+..++|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 4467899999999999965 577889988654321 1222345689999999999999999666666676777999
Q ss_pred EEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccC
Q 012219 248 YEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNF 327 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~ 327 (468)
|||+++++|.+++.. +..++.|++.||.||| +.+|+||||||+|||++. .+||+|||+++....
T Consensus 418 mE~~~ggsL~~~l~~-----------~~~i~~qi~~aL~~LH---~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~ 481 (540)
T 3en9_A 418 MSYINGKLAKDVIED-----------NLDIAYKIGEIVGKLH---KNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNL 481 (540)
T ss_dssp EECCCSEEHHHHSTT-----------CTHHHHHHHHHHHHHH---HTTEECTTCCTTSEEESS--SEEECCCTTCEECCC
T ss_pred EECCCCCCHHHHHHH-----------HHHHHHHHHHHHHHHH---HCcCccCCCCHHHEEECC--eEEEEECccCEECCC
Confidence 999999999999875 4589999999999999 779999999999999999 999999999988653
Q ss_pred CCCC-------ceeccccccccccccccC--CCCCccchhhHHHHHHHHHHhCCCCCC
Q 012219 328 DSSN-------RTLLAGTYGYIAPELAYT--MVVTEKCDVYSFGVVALEVLMGKHPGE 376 (468)
Q Consensus 328 ~~~~-------~~~~~g~~~y~aPE~~~~--~~~~~~~Dv~s~Gvil~el~tg~~p~~ 376 (468)
.... .....||+.|+|||++.. ..|+..+|+||..+-..+-+.++.+|.
T Consensus 482 ~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 482 DEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp HHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred ccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 2111 134679999999999987 568889999999999999888877753
No 253
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.91 E-value=1.1e-24 Score=204.53 Aligned_cols=167 Identities=17% Similarity=0.155 Sum_probs=126.4
Q ss_pred HHHHHHhhCccccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhh---------------hhHHHHHHHHHHHhhcc
Q 012219 163 QDMIEATEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEEL---------------ASLESFGNEARLLSQIR 227 (468)
Q Consensus 163 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~---------------~~~~~~~~e~~~l~~l~ 227 (468)
..+......|.+.+.||+|+||.||+|...+|+.||+|+++....... .....+.+|++++++++
T Consensus 83 ~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~ 162 (282)
T 1zar_A 83 HRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ 162 (282)
T ss_dssp HHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc
Confidence 334444556777899999999999999887899999999975432111 13467889999999999
Q ss_pred CCceeeEEEEEeeCCEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcee
Q 012219 228 HRNIVKLYGFCLHRKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVL 307 (468)
Q Consensus 228 h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIl 307 (468)
| +++.+++.. +..++||||+++|+|.+ +.. .....++.|++.||.||| +.+|+||||||+|||
T Consensus 163 ~---~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~---------~~~~~i~~qi~~~l~~lH---~~giiHrDlkp~NIL 225 (282)
T 1zar_A 163 G---LAVPKVYAW-EGNAVLMELIDAKELYR-VRV---------ENPDEVLDMILEEVAKFY---HRGIVHGDLSQYNVL 225 (282)
T ss_dssp T---SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC---------SCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEE
T ss_pred C---CCcCeEEec-cceEEEEEecCCCcHHH-cch---------hhHHHHHHHHHHHHHHHH---HCCCEeCCCCHHHEE
Confidence 4 555554433 44699999999999988 432 123469999999999999 789999999999999
Q ss_pred eCCCCCeEEeeccccccccCCCCCceeccccccccccccccC----------CCCCccchhhH
Q 012219 308 LNSELEAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYT----------MVVTEKCDVYS 360 (468)
Q Consensus 308 l~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~----------~~~~~~~Dv~s 360 (468)
++ ++.+||+|||+++.. ..++|||++.. ..+...+|+|.
T Consensus 226 l~-~~~vkl~DFG~a~~~-------------~~~~a~e~l~rdv~~i~~~f~~~~~~~~~~~~ 274 (282)
T 1zar_A 226 VS-EEGIWIIDFPQSVEV-------------GEEGWREILERDVRNIITYFSRTYRTEKDINS 274 (282)
T ss_dssp EE-TTEEEECCCTTCEET-------------TSTTHHHHHHHHHHHHHHHHHHHHCCCCCHHH
T ss_pred EE-CCcEEEEECCCCeEC-------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCChHH
Confidence 99 999999999999643 34688998743 33445566654
No 254
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.81 E-value=8.2e-20 Score=169.30 Aligned_cols=141 Identities=21% Similarity=0.226 Sum_probs=106.3
Q ss_pred CccccceeeeeCCceEEEEEc-CCCCE--EEEEEecCcchhh---------------------hhhHHHHHHHHHHHhhc
Q 012219 171 DFHIKYCIGTGGYGSVYRARL-PSGKV--VALKKLHRSETEE---------------------LASLESFGNEARLLSQI 226 (468)
Q Consensus 171 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~~~---------------------~~~~~~~~~e~~~l~~l 226 (468)
-|.+.+.||+|+||.||+|.. .+|+. ||||+++...... ......+.+|++.+.++
T Consensus 48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 127 (258)
T 1zth_A 48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA 127 (258)
T ss_dssp EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence 366788999999999999987 68888 9999976432110 01123678999999999
Q ss_pred cCCce--eeEEEEEeeCCEEEEEEEeccC-C----ChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEec
Q 012219 227 RHRNI--VKLYGFCLHRKCMFLIYEYMEM-G----SLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHR 299 (468)
Q Consensus 227 ~h~ni--v~l~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~ 299 (468)
+|+++ ..++++ ...++||||+.+ | +|.+.... .++.....++.|++.||.|||. +.+|+||
T Consensus 128 ~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~------~~~~~~~~i~~qi~~~l~~lH~--~~givHr 195 (258)
T 1zth_A 128 KEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE------LKELDVEGIFNDVVENVKRLYQ--EAELVHA 195 (258)
T ss_dssp HHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG------GGGSCHHHHHHHHHHHHHHHHH--TSCEECS
T ss_pred HhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc------cChHHHHHHHHHHHHHHHHHHH--HCCEEeC
Confidence 88754 344443 245899999942 4 56655432 2234567899999999999994 3589999
Q ss_pred CCCCCceeeCCCCCeEEeeccccccc
Q 012219 300 DISSNNVLLNSELEAFVADFGVARLL 325 (468)
Q Consensus 300 dlk~~NIll~~~~~~kl~Dfg~~~~~ 325 (468)
||||+|||++. .++|+|||+|...
T Consensus 196 Dlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 196 DLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp SCSTTSEEESS--SEEECCCTTCEET
T ss_pred CCCHHHEEEcC--cEEEEECcccccC
Confidence 99999999998 9999999999764
No 255
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.70 E-value=2.7e-17 Score=158.44 Aligned_cols=141 Identities=13% Similarity=0.121 Sum_probs=101.1
Q ss_pred CccccceeeeeCCceEEEEEcCCCCEEEEEEecCcchh---------------hhh----hHHHHHHHHHHHhhccCCce
Q 012219 171 DFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETE---------------ELA----SLESFGNEARLLSQIRHRNI 231 (468)
Q Consensus 171 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---------------~~~----~~~~~~~e~~~l~~l~h~ni 231 (468)
-|.+...||+|++|.||+|...+|+.||||+++..... ... .......|...|.++.+.++
T Consensus 96 iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv 175 (397)
T 4gyi_A 96 VYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF 175 (397)
T ss_dssp CSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 48899999999999999999989999999987643210 000 00112356777777765543
Q ss_pred eeEEEEEeeCCEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCC
Q 012219 232 VKLYGFCLHRKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSE 311 (468)
Q Consensus 232 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~ 311 (468)
....-+.... .+|||||++|++|..+... .....++.|++.+|.+|| ..|||||||||.|||++++
T Consensus 176 ~vp~p~~~~~--~~LVME~i~G~~L~~l~~~---------~~~~~l~~qll~~l~~lH---~~gIVHrDLKp~NILl~~d 241 (397)
T 4gyi_A 176 PVPEPIAQSR--HTIVMSLVDALPMRQVSSV---------PDPASLYADLIALILRLA---KHGLIHGDFNEFNILIREE 241 (397)
T ss_dssp SCCCEEEEET--TEEEEECCSCEEGGGCCCC---------SCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEEEE
T ss_pred CCCeeeeccC--ceEEEEecCCccHhhhccc---------HHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEeCC
Confidence 2221121222 3799999999888665432 123467899999999999 6799999999999999887
Q ss_pred CC----------eEEeeccccccc
Q 012219 312 LE----------AFVADFGVARLL 325 (468)
Q Consensus 312 ~~----------~kl~Dfg~~~~~ 325 (468)
+. +.|+||+-+...
T Consensus 242 gd~~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 242 KDAEDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp ECSSCTTSEEEEEEECCCTTCEET
T ss_pred CCcccccccccceEEEEeCCcccC
Confidence 63 789999987543
No 256
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.47 E-value=4.5e-14 Score=151.04 Aligned_cols=91 Identities=34% Similarity=0.601 Sum_probs=85.1
Q ss_pred CCCCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCCcCCC---ccce
Q 012219 2 NCSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPESVRK---VPHL 78 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~~~---l~~l 78 (468)
++++|+.|||++|+|+|.+|.+|++|++|+.|+|++|+|+|.+|.+|++|++|+.||||+|+++|.+|..+.+ |+.|
T Consensus 630 ~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L 709 (768)
T 3rgz_A 630 NNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEI 709 (768)
T ss_dssp SSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEE
T ss_pred ccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEE
Confidence 4688999999999999999999999999999999999999999999999999999999999999999987654 5668
Q ss_pred ecccccccccCCCC
Q 012219 79 YVYGKNFDVEIPNT 92 (468)
Q Consensus 79 ~~~~n~l~~~~p~~ 92 (468)
++++|++++.+|..
T Consensus 710 ~ls~N~l~g~iP~~ 723 (768)
T 3rgz_A 710 DLSNNNLSGPIPEM 723 (768)
T ss_dssp ECCSSEEEEECCSS
T ss_pred ECcCCcccccCCCc
Confidence 99999999999865
No 257
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.43 E-value=1.7e-13 Score=120.67 Aligned_cols=93 Identities=18% Similarity=0.249 Sum_probs=70.4
Q ss_pred CCcEEEccCCcccccCCc-ccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCCcC---CCccceec
Q 012219 5 KLRVLELGNNLLSGSIPS-EINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPESV---RKVPHLYV 80 (468)
Q Consensus 5 ~l~~l~l~~N~l~g~~p~-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~---~~l~~l~~ 80 (468)
+|+.|+|++|+|++..|. .|+++++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..|..+ .+|+.|++
T Consensus 30 ~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 109 (192)
T 1w8a_A 30 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 109 (192)
T ss_dssp TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEEC
T ss_pred CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEEC
Confidence 688888888888854443 37888888888888888887778888888888888888888886666544 45566778
Q ss_pred ccccccccCCCCCCCCC
Q 012219 81 YGKNFDVEIPNTSENSP 97 (468)
Q Consensus 81 ~~n~l~~~~p~~~~~~~ 97 (468)
++|.+.+..|..+...+
T Consensus 110 ~~N~l~~~~~~~~~~l~ 126 (192)
T 1w8a_A 110 YDNQISCVMPGSFEHLN 126 (192)
T ss_dssp CSSCCCEECTTSSTTCT
T ss_pred CCCcCCeeCHHHhhcCC
Confidence 88888877776655443
No 258
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.35 E-value=2.1e-12 Score=116.29 Aligned_cols=95 Identities=16% Similarity=0.216 Sum_probs=71.2
Q ss_pred CCCCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCCcC---CCccce
Q 012219 2 NCSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPESV---RKVPHL 78 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~---~~l~~l 78 (468)
++++|+.|+|++|+|++..|..|+++++|++|+|++|+|++..|..|.++++|+.|+|++|++++..|..+ .+|..|
T Consensus 55 ~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 134 (220)
T 2v70_A 55 KLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLL 134 (220)
T ss_dssp GCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEE
T ss_pred cCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEE
Confidence 46778888888888886666678888888888888888887767778888888888888888886666654 345567
Q ss_pred ecccccccccCCCCCCCC
Q 012219 79 YVYGKNFDVEIPNTSENS 96 (468)
Q Consensus 79 ~~~~n~l~~~~p~~~~~~ 96 (468)
++++|.+.+..|..+...
T Consensus 135 ~L~~N~l~~~~~~~~~~l 152 (220)
T 2v70_A 135 SLYDNQITTVAPGAFDTL 152 (220)
T ss_dssp ECTTSCCCCBCTTTTTTC
T ss_pred ECCCCcCCEECHHHhcCC
Confidence 788888877666655443
No 259
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.35 E-value=1.6e-12 Score=111.94 Aligned_cols=86 Identities=17% Similarity=0.328 Sum_probs=63.7
Q ss_pred CCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCCcC---CCccceec
Q 012219 4 SKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPESV---RKVPHLYV 80 (468)
Q Consensus 4 ~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~---~~l~~l~~ 80 (468)
++|+.|+|++|+|++..|..|+++++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..|..+ .+|+.|++
T Consensus 30 ~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 109 (170)
T 3g39_A 30 TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWL 109 (170)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCccCEeCHHHhcCCCCCCEEEe
Confidence 567888888888886667778888888888888888886555567888888888888888885433333 45566778
Q ss_pred ccccccccC
Q 012219 81 YGKNFDVEI 89 (468)
Q Consensus 81 ~~n~l~~~~ 89 (468)
++|.+.+.+
T Consensus 110 ~~N~~~c~c 118 (170)
T 3g39_A 110 LNNPWDCAC 118 (170)
T ss_dssp CSSCBCTTB
T ss_pred CCCCCCCCc
Confidence 888776643
No 260
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.34 E-value=1.6e-12 Score=117.04 Aligned_cols=90 Identities=17% Similarity=0.171 Sum_probs=79.3
Q ss_pred CCCCCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCCcCC---Cccc
Q 012219 1 MNCSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPESVR---KVPH 77 (468)
Q Consensus 1 ~~l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~~---~l~~ 77 (468)
+++++|+.|+|++|+|++..|..|+++++|++|+|++|+|++..|..|.++++|+.|+|++|++++..|..+. ++..
T Consensus 78 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 157 (220)
T 2v70_A 78 EGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLST 157 (220)
T ss_dssp TTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCE
T ss_pred CCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCE
Confidence 3688999999999999977777799999999999999999988899999999999999999999977787665 5566
Q ss_pred eecccccccccCC
Q 012219 78 LYVYGKNFDVEIP 90 (468)
Q Consensus 78 l~~~~n~l~~~~p 90 (468)
|++++|++.+.++
T Consensus 158 L~L~~N~l~c~c~ 170 (220)
T 2v70_A 158 LNLLANPFNCNCY 170 (220)
T ss_dssp EECCSCCEECSGG
T ss_pred EEecCcCCcCCCc
Confidence 8899999987543
No 261
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.33 E-value=3.7e-12 Score=117.93 Aligned_cols=145 Identities=11% Similarity=0.045 Sum_probs=112.2
Q ss_pred HHhhCccccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhcc-CCceeeEEEEEeeCCEEE
Q 012219 167 EATEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIR-HRNIVKLYGFCLHRKCMF 245 (468)
Q Consensus 167 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~ 245 (468)
.....|.+...++.|+.+.||++... ++.+++|+........ ...+.+|+++++.+. +..+.++++++...+..+
T Consensus 11 ~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~---~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~ 86 (263)
T 3tm0_A 11 KLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGT---TYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSN 86 (263)
T ss_dssp HHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTS---TTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEE
T ss_pred HHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCC---HHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceE
Confidence 34567888888888899999999864 6889999987532111 135778999999885 677888999999888999
Q ss_pred EEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcC---------------------------------
Q 012219 246 LIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDC--------------------------------- 292 (468)
Q Consensus 246 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~--------------------------------- 292 (468)
+||||++|.+|.+.+.. ......++.+++++|..||...
T Consensus 87 lv~e~i~G~~l~~~~~~--------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (263)
T 3tm0_A 87 LLMSEADGVLCSEEYED--------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENW 158 (263)
T ss_dssp EEEECCSSEEHHHHCCT--------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGG
T ss_pred EEEEecCCeehhhccCC--------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccc
Confidence 99999999998876421 1123467889999999999610
Q ss_pred -----------------------CCCeEecCCCCCceeeCCCCCeEEeeccccc
Q 012219 293 -----------------------TPPIVHRDISSNNVLLNSELEAFVADFGVAR 323 (468)
Q Consensus 293 -----------------------~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~ 323 (468)
...++|+|++|.||+++++..+.|.||+.+.
T Consensus 159 ~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 159 EEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp STTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred cccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 1458999999999999876666799998774
No 262
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.33 E-value=2.1e-12 Score=111.74 Aligned_cols=84 Identities=24% Similarity=0.454 Sum_probs=58.9
Q ss_pred CCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCCc-C---CCcccee
Q 012219 4 SKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPES-V---RKVPHLY 79 (468)
Q Consensus 4 ~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~-~---~~l~~l~ 79 (468)
++|+.|+|++|+|++..|..|+++++|++|+|++|+|++..+..|.++++|+.|+|++|+|++ +|.. + .+|..|+
T Consensus 33 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l~~-l~~~~~~~l~~L~~L~ 111 (174)
T 2r9u_A 33 TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKS-IPRGAFDNLKSLTHIY 111 (174)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCTTCSEEE
T ss_pred CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCccce-eCHHHhccccCCCEEE
Confidence 467778888888876667777778888888888888875444446777888888888888874 4442 3 4455667
Q ss_pred ccccccccc
Q 012219 80 VYGKNFDVE 88 (468)
Q Consensus 80 ~~~n~l~~~ 88 (468)
+++|.+...
T Consensus 112 L~~N~~~c~ 120 (174)
T 2r9u_A 112 LYNNPWDCE 120 (174)
T ss_dssp CCSSCBCTT
T ss_pred eCCCCcccc
Confidence 777776653
No 263
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.33 E-value=1.5e-12 Score=139.34 Aligned_cols=87 Identities=37% Similarity=0.560 Sum_probs=78.5
Q ss_pred CCCCCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCCc--CCCccce
Q 012219 1 MNCSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPES--VRKVPHL 78 (468)
Q Consensus 1 ~~l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~--~~~l~~l 78 (468)
++|++|+.|+|++|+|+|.||++|++|++|+.||||+|+|+|.+|..+++|++|+.||||+|+|+|.||.. +.+++..
T Consensus 653 ~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~ 732 (768)
T 3rgz_A 653 GSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPA 732 (768)
T ss_dssp GGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGG
T ss_pred hccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHH
Confidence 36889999999999999999999999999999999999999999999999999999999999999999974 5566666
Q ss_pred eccccc-ccc
Q 012219 79 YVYGKN-FDV 87 (468)
Q Consensus 79 ~~~~n~-l~~ 87 (468)
.+.+|. +++
T Consensus 733 ~~~gN~~Lcg 742 (768)
T 3rgz_A 733 KFLNNPGLCG 742 (768)
T ss_dssp GGCSCTEEES
T ss_pred HhcCCchhcC
Confidence 677775 444
No 264
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.32 E-value=2.3e-12 Score=113.50 Aligned_cols=92 Identities=21% Similarity=0.306 Sum_probs=76.6
Q ss_pred CCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCCcC---CCccceec
Q 012219 4 SKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPESV---RKVPHLYV 80 (468)
Q Consensus 4 ~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~---~~l~~l~~ 80 (468)
++|+.|+|++|+|+ .+|+.|.++++|+.|+|++|+|++..|..|.+|++|+.|+|++|+|++..|..+ .+|..|++
T Consensus 31 ~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L 109 (193)
T 2wfh_A 31 RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSL 109 (193)
T ss_dssp TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEEC
Confidence 57899999999998 899999999999999999999997777889999999999999999996555545 45667889
Q ss_pred ccccccccCCCCCCCC
Q 012219 81 YGKNFDVEIPNTSENS 96 (468)
Q Consensus 81 ~~n~l~~~~p~~~~~~ 96 (468)
++|.+....+..+...
T Consensus 110 ~~N~l~~~~~~~~~~l 125 (193)
T 2wfh_A 110 HGNDISVVPEGAFNDL 125 (193)
T ss_dssp CSSCCCBCCTTTTTTC
T ss_pred CCCCCCeeChhhhhcC
Confidence 9999887655545443
No 265
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.32 E-value=3.6e-13 Score=136.17 Aligned_cols=85 Identities=15% Similarity=0.177 Sum_probs=54.1
Q ss_pred CCCCcEEEccCCcccccCCcccccCCCCCEeeccCcccccccccccc-CCCCCceecccCcccccccCC-cCCCccceec
Q 012219 3 CSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLG-EIPRIDTVDLSMNNLSGSIPE-SVRKVPHLYV 80 (468)
Q Consensus 3 l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~-~l~~L~~l~l~~N~l~g~~p~-~~~~l~~l~~ 80 (468)
+++|+.|+|++|+|++..|..|+++++|++|+|++|+|++.+|..+. +|++|+.|+|++|+|++..+. .+.+|..|++
T Consensus 119 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~~~~l~~L~~L~L 198 (487)
T 3oja_A 119 GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKGQVVFAKLKTLDL 198 (487)
T ss_dssp CSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEECCCCCTTCCEEEC
T ss_pred cCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccccccccCCCCCEEEC
Confidence 56677777777777766666777777777777777777776666665 566666666666666643221 2344555555
Q ss_pred ccccccc
Q 012219 81 YGKNFDV 87 (468)
Q Consensus 81 ~~n~l~~ 87 (468)
++|.+++
T Consensus 199 s~N~l~~ 205 (487)
T 3oja_A 199 SSNKLAF 205 (487)
T ss_dssp CSSCCCE
T ss_pred CCCCCCC
Confidence 5555544
No 266
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.31 E-value=1e-12 Score=125.06 Aligned_cols=96 Identities=33% Similarity=0.548 Sum_probs=81.0
Q ss_pred CCCCCcEEEccC-CcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCCcC---CCccc
Q 012219 2 NCSKLRVLELGN-NLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPESV---RKVPH 77 (468)
Q Consensus 2 ~l~~l~~l~l~~-N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~---~~l~~ 77 (468)
++++|+.|+|++ |+++|.+|..|+++++|++|+|++|+++|.+|..|.++++|++|+|++|+++|.+|..+ .+|+.
T Consensus 74 ~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 153 (313)
T 1ogq_A 74 NLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVG 153 (313)
T ss_dssp GCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCE
T ss_pred CCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCe
Confidence 578899999994 99999999999999999999999999999999999999999999999999998888755 45566
Q ss_pred eecccccccccCCCCCCCCC
Q 012219 78 LYVYGKNFDVEIPNTSENSP 97 (468)
Q Consensus 78 l~~~~n~l~~~~p~~~~~~~ 97 (468)
|++++|.+.+.+|......+
T Consensus 154 L~L~~N~l~~~~p~~l~~l~ 173 (313)
T 1ogq_A 154 ITFDGNRISGAIPDSYGSFS 173 (313)
T ss_dssp EECCSSCCEEECCGGGGCCC
T ss_pred EECcCCcccCcCCHHHhhhh
Confidence 78889988877776655443
No 267
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.30 E-value=6.4e-12 Score=113.08 Aligned_cols=88 Identities=23% Similarity=0.271 Sum_probs=42.7
Q ss_pred CCCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCCcC---CCcccee
Q 012219 3 CSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPESV---RKVPHLY 79 (468)
Q Consensus 3 l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~---~~l~~l~ 79 (468)
+++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|+.|+|++|++++..|..+ .+|+.|+
T Consensus 55 l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 134 (220)
T 2v9t_B 55 YKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLS 134 (220)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEE
Confidence 4455555555555554445555555555555555555552222234555555555555555554334333 2333445
Q ss_pred cccccccccCC
Q 012219 80 VYGKNFDVEIP 90 (468)
Q Consensus 80 ~~~n~l~~~~p 90 (468)
+++|.+....+
T Consensus 135 L~~N~l~~~~~ 145 (220)
T 2v9t_B 135 LYDNKLQTIAK 145 (220)
T ss_dssp CCSSCCSCCCT
T ss_pred CCCCcCCEECH
Confidence 55555544433
No 268
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.30 E-value=1.4e-12 Score=124.06 Aligned_cols=94 Identities=22% Similarity=0.394 Sum_probs=82.4
Q ss_pred CCCcEEEccCCcccc--cCCcccccCCCCCEeeccC-ccccccccccccCCCCCceecccCcccccccCCcCC---Cccc
Q 012219 4 SKLRVLELGNNLLSG--SIPSEINKLQELNYLNLSH-NSINGKILSQLGEIPRIDTVDLSMNNLSGSIPESVR---KVPH 77 (468)
Q Consensus 4 ~~l~~l~l~~N~l~g--~~p~~~~~l~~L~~L~l~~-N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~~---~l~~ 77 (468)
.+++.|+|++|+++| .+|+.|+++++|++|+|++ |+++|.+|..|+++++|++|+|++|+++|.+|..+. +|+.
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 579999999999999 8999999999999999995 999999999999999999999999999999998654 5667
Q ss_pred eecccccccccCCCCCCCCC
Q 012219 78 LYVYGKNFDVEIPNTSENSP 97 (468)
Q Consensus 78 l~~~~n~l~~~~p~~~~~~~ 97 (468)
|++++|.+.+..|......+
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~ 149 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLP 149 (313)
T ss_dssp EECCSSEEESCCCGGGGGCT
T ss_pred EeCCCCccCCcCChHHhcCC
Confidence 88999999887776655443
No 269
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.29 E-value=3.9e-12 Score=122.90 Aligned_cols=86 Identities=20% Similarity=0.275 Sum_probs=67.2
Q ss_pred CCCCCcEEEccC-CcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCC-cCCC--ccc
Q 012219 2 NCSKLRVLELGN-NLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPE-SVRK--VPH 77 (468)
Q Consensus 2 ~l~~l~~l~l~~-N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~-~~~~--l~~ 77 (468)
++++|+.|+|++ |+|++..|..|++|++|+.|+|++|+|+|..|..|.+|++|+.|+|++|+|++ +|. .+.. |..
T Consensus 29 ~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~-~~~~~~~~~~L~~ 107 (347)
T 2ifg_A 29 GAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALES-LSWKTVQGLSLQE 107 (347)
T ss_dssp SCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSC-CCSTTTCSCCCCE
T ss_pred CCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCccce-eCHHHcccCCceE
Confidence 467788888886 88886666778888888888888888888878888888888888888888884 554 3332 667
Q ss_pred eeccccccccc
Q 012219 78 LYVYGKNFDVE 88 (468)
Q Consensus 78 l~~~~n~l~~~ 88 (468)
|++.+|.+.+.
T Consensus 108 l~l~~N~~~c~ 118 (347)
T 2ifg_A 108 LVLSGNPLHCS 118 (347)
T ss_dssp EECCSSCCCCC
T ss_pred EEeeCCCccCC
Confidence 78888887664
No 270
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.29 E-value=9.2e-12 Score=109.60 Aligned_cols=86 Identities=21% Similarity=0.299 Sum_probs=73.3
Q ss_pred CCCCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCC-cC---CCccc
Q 012219 2 NCSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPE-SV---RKVPH 77 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~-~~---~~l~~ 77 (468)
++++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..|..|.++++|+.|+|++|+|+ .+|. .+ .++..
T Consensus 52 ~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~ 130 (193)
T 2wfh_A 52 NYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDIS-VVPEGAFNDLSALSH 130 (193)
T ss_dssp GCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCCC-BCCTTTTTTCTTCCE
T ss_pred cccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECCCCCCC-eeChhhhhcCccccE
Confidence 5788999999999999766778999999999999999999877888999999999999999999 4554 34 45667
Q ss_pred eeccccccccc
Q 012219 78 LYVYGKNFDVE 88 (468)
Q Consensus 78 l~~~~n~l~~~ 88 (468)
|++.+|++.+.
T Consensus 131 L~L~~N~~~C~ 141 (193)
T 2wfh_A 131 LAIGANPLYCD 141 (193)
T ss_dssp EECCSSCEECS
T ss_pred EEeCCCCeecC
Confidence 88999988764
No 271
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.28 E-value=8.5e-12 Score=109.76 Aligned_cols=89 Identities=22% Similarity=0.299 Sum_probs=79.7
Q ss_pred CCCCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCCcCC---Cccce
Q 012219 2 NCSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPESVR---KVPHL 78 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~~---~l~~l 78 (468)
++++|+.|+|++|+|++..|..|+++++|++|+|++|+|++..|..|.++++|+.|+|++|++++.+|..+. ++..|
T Consensus 52 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 131 (192)
T 1w8a_A 52 RLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSL 131 (192)
T ss_dssp GCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEE
T ss_pred cCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEE
Confidence 578999999999999988899999999999999999999988888899999999999999999988887665 56668
Q ss_pred ecccccccccCC
Q 012219 79 YVYGKNFDVEIP 90 (468)
Q Consensus 79 ~~~~n~l~~~~p 90 (468)
++++|.+.+.++
T Consensus 132 ~L~~N~l~c~c~ 143 (192)
T 1w8a_A 132 NLASNPFNCNCH 143 (192)
T ss_dssp ECTTCCBCCSGG
T ss_pred EeCCCCccCcCc
Confidence 899999987543
No 272
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.26 E-value=7.7e-12 Score=119.79 Aligned_cols=88 Identities=18% Similarity=0.292 Sum_probs=48.5
Q ss_pred CCCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCCcCC---Ccccee
Q 012219 3 CSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPESVR---KVPHLY 79 (468)
Q Consensus 3 l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~~---~l~~l~ 79 (468)
+++|+.|+|++|+|+ .+|..++++++|++|+|++|+++ .+|..++++++|+.|+|++|++.+.+|..+. +|+.|+
T Consensus 182 l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~-~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~ 259 (328)
T 4fcg_A 182 LVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS-ALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLI 259 (328)
T ss_dssp STTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCC-CCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEE
T ss_pred CCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCC-cCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEE
Confidence 555666666666665 55555555556666666666555 3444555555555555555555555555432 333445
Q ss_pred cccccccccCCCC
Q 012219 80 VYGKNFDVEIPNT 92 (468)
Q Consensus 80 ~~~n~l~~~~p~~ 92 (468)
+++|++.+.+|..
T Consensus 260 L~~n~~~~~~p~~ 272 (328)
T 4fcg_A 260 LKDCSNLLTLPLD 272 (328)
T ss_dssp CTTCTTCCBCCTT
T ss_pred CCCCCchhhcchh
Confidence 5555555555543
No 273
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.25 E-value=9.6e-12 Score=107.84 Aligned_cols=92 Identities=20% Similarity=0.177 Sum_probs=72.9
Q ss_pred CCCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCCc---CCCcccee
Q 012219 3 CSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPES---VRKVPHLY 79 (468)
Q Consensus 3 l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~---~~~l~~l~ 79 (468)
.++|+.|+|++|++++..+..|+++++|++|+|++|+|++..|..|.++++|+.|+|++|++++..|.. +.+|+.|+
T Consensus 27 ~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ 106 (177)
T 2o6r_A 27 PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELA 106 (177)
T ss_dssp CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEE
Confidence 367999999999999655566899999999999999999666666899999999999999999554443 35677788
Q ss_pred cccccccccCCCCCC
Q 012219 80 VYGKNFDVEIPNTSE 94 (468)
Q Consensus 80 ~~~n~l~~~~p~~~~ 94 (468)
+++|.+....+..+.
T Consensus 107 l~~N~l~~~~~~~~~ 121 (177)
T 2o6r_A 107 LDTNQLKSVPDGIFD 121 (177)
T ss_dssp CCSSCCSCCCTTTTT
T ss_pred CcCCcceEeCHHHhc
Confidence 999988765444333
No 274
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.24 E-value=2.2e-11 Score=110.23 Aligned_cols=83 Identities=17% Similarity=0.292 Sum_probs=41.4
Q ss_pred CCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCCc---CCCccceec
Q 012219 4 SKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPES---VRKVPHLYV 80 (468)
Q Consensus 4 ~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~---~~~l~~l~~ 80 (468)
++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..+..|.++++|+.|+|++|+|++..|.. +.+|+.|++
T Consensus 40 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L 119 (229)
T 3e6j_A 40 TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFM 119 (229)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEec
Confidence 34555555555555444555555555555555555554333333455555555555555555322221 233444455
Q ss_pred cccccc
Q 012219 81 YGKNFD 86 (468)
Q Consensus 81 ~~n~l~ 86 (468)
++|.+.
T Consensus 120 s~N~l~ 125 (229)
T 3e6j_A 120 CCNKLT 125 (229)
T ss_dssp CSSCCC
T ss_pred cCCccc
Confidence 555544
No 275
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.23 E-value=1.9e-11 Score=112.86 Aligned_cols=137 Identities=16% Similarity=0.114 Sum_probs=99.4
Q ss_pred CccccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCc--eeeEEEEEeeCCEEEEEE
Q 012219 171 DFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRN--IVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 171 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~~~~~~~~~~~lv~ 248 (468)
.+.+....+.|..+.||++...+|+.+++|...... ...+.+|+++++.+.+.+ +.+++++....+..++||
T Consensus 21 ~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~~------~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~ 94 (264)
T 1nd4_A 21 GYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSGA------LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLL 94 (264)
T ss_dssp TCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSCT------TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEE
T ss_pred CCceEecccCCCCceEEEEecCCCCeEEEEeCCccc------chhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEE
Confidence 344433334556699999988778889999976542 134668999999886544 456888888777889999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcC------------------------------------
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDC------------------------------------ 292 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~------------------------------------ 292 (468)
||++|.++. ... .+ ...++.+++..|..||...
T Consensus 95 e~i~G~~l~--~~~------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (264)
T 1nd4_A 95 GEVPGQDLL--SSH------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQ 163 (264)
T ss_dssp ECCSSEETT--TSC------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGT
T ss_pred EecCCcccC--cCc------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhcc
Confidence 999998884 211 11 1256777888888888531
Q ss_pred -------------------CCCeEecCCCCCceeeCCCCCeEEeecccccc
Q 012219 293 -------------------TPPIVHRDISSNNVLLNSELEAFVADFGVARL 324 (468)
Q Consensus 293 -------------------~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~ 324 (468)
...++|+|++|.||+++++..+.|.|||.+..
T Consensus 164 ~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 164 GLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp TCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred CccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 11399999999999998876677999998753
No 276
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.22 E-value=1.6e-11 Score=128.29 Aligned_cols=85 Identities=22% Similarity=0.317 Sum_probs=41.5
Q ss_pred CCCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCCcCC----Cccce
Q 012219 3 CSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPESVR----KVPHL 78 (468)
Q Consensus 3 l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~~----~l~~l 78 (468)
+++|+.|+|++|+|++..|..|++|++|+.|+|++|+|++..|..|.+|++|+.|+|++|+|++..|..+. +|+.|
T Consensus 493 l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L 572 (635)
T 4g8a_A 493 LRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFL 572 (635)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEE
T ss_pred ccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEE
Confidence 44455555555555544444455555555555555555544444455555555555555555544444332 23334
Q ss_pred ecccccccc
Q 012219 79 YVYGKNFDV 87 (468)
Q Consensus 79 ~~~~n~l~~ 87 (468)
++++|++.+
T Consensus 573 ~L~~Np~~C 581 (635)
T 4g8a_A 573 NLTQNDFAC 581 (635)
T ss_dssp ECTTCCBCC
T ss_pred EeeCCCCcc
Confidence 455555444
No 277
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.21 E-value=2.1e-11 Score=110.40 Aligned_cols=94 Identities=17% Similarity=0.248 Sum_probs=77.5
Q ss_pred CCCCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCCcC---CCccce
Q 012219 2 NCSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPESV---RKVPHL 78 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~---~~l~~l 78 (468)
++++|+.|+|++|+|++..+..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|+|+ .+|..+ .+|..|
T Consensus 62 ~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L 140 (229)
T 3e6j_A 62 SLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHL 140 (229)
T ss_dssp TCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEE
T ss_pred CccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEE
Confidence 6789999999999998444456799999999999999999766667899999999999999999 888855 456678
Q ss_pred ecccccccccCCCCCCCC
Q 012219 79 YVYGKNFDVEIPNTSENS 96 (468)
Q Consensus 79 ~~~~n~l~~~~p~~~~~~ 96 (468)
++++|.+....+..+...
T Consensus 141 ~L~~N~l~~~~~~~~~~l 158 (229)
T 3e6j_A 141 ALDQNQLKSIPHGAFDRL 158 (229)
T ss_dssp ECCSSCCCCCCTTTTTTC
T ss_pred ECCCCcCCccCHHHHhCC
Confidence 899999987655444433
No 278
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.21 E-value=2.9e-11 Score=108.79 Aligned_cols=92 Identities=13% Similarity=0.240 Sum_probs=79.7
Q ss_pred CCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCC----cCCCcccee
Q 012219 4 SKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPE----SVRKVPHLY 79 (468)
Q Consensus 4 ~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~----~~~~l~~l~ 79 (468)
++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..|..|.++++|+.|+|++|+|+ .+|. .+.+|+.|+
T Consensus 32 ~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~f~~l~~L~~L~ 110 (220)
T 2v9t_B 32 ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT-ELPKSLFEGLFSLQLLL 110 (220)
T ss_dssp TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCC-CCCTTTTTTCTTCCEEE
T ss_pred cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCC-ccCHhHccCCCCCCEEE
Confidence 47999999999999666678999999999999999999888999999999999999999999 5665 345677889
Q ss_pred cccccccccCCCCCCCC
Q 012219 80 VYGKNFDVEIPNTSENS 96 (468)
Q Consensus 80 ~~~n~l~~~~p~~~~~~ 96 (468)
+++|.+....|..+...
T Consensus 111 L~~N~l~~~~~~~~~~l 127 (220)
T 2v9t_B 111 LNANKINCLRVDAFQDL 127 (220)
T ss_dssp CCSSCCCCCCTTTTTTC
T ss_pred CCCCCCCEeCHHHcCCC
Confidence 99999988777655443
No 279
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.20 E-value=4.2e-11 Score=110.03 Aligned_cols=83 Identities=19% Similarity=0.294 Sum_probs=41.1
Q ss_pred CCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCCc---CCCccceecc
Q 012219 5 KLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPES---VRKVPHLYVY 81 (468)
Q Consensus 5 ~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~---~~~l~~l~~~ 81 (468)
+|+.|+|++|++++..|..|+++++|++|+|++|+|++..|..|.++++|+.|+|++|++++..|.. +.+|..|+++
T Consensus 36 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 115 (251)
T 3m19_A 36 DTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLG 115 (251)
T ss_dssp TCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcC
Confidence 3555555555555444444555555555555555555444444555555555555555555322222 2333444455
Q ss_pred cccccc
Q 012219 82 GKNFDV 87 (468)
Q Consensus 82 ~n~l~~ 87 (468)
+|.+..
T Consensus 116 ~N~l~~ 121 (251)
T 3m19_A 116 GNQLKS 121 (251)
T ss_dssp SSCCCC
T ss_pred CCcCCC
Confidence 555443
No 280
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.20 E-value=2e-11 Score=125.36 Aligned_cols=85 Identities=22% Similarity=0.336 Sum_probs=51.2
Q ss_pred CCCCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCccccccc-CCcCC---Cccc
Q 012219 2 NCSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSI-PESVR---KVPH 77 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~-p~~~~---~l~~ 77 (468)
+|++|+.|+|++|+|+ .+|..|++|++|+.|+|++|+|++ +| .|++|++|+.|+|++|+|++.. |..+. +|..
T Consensus 461 ~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~ 537 (567)
T 1dce_A 461 QLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVL 537 (567)
T ss_dssp GGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCE
T ss_pred ccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCE
Confidence 3556666666666666 666666666666666666666664 55 5666666666666666666443 55433 3444
Q ss_pred eecccccccccC
Q 012219 78 LYVYGKNFDVEI 89 (468)
Q Consensus 78 l~~~~n~l~~~~ 89 (468)
|++++|++++..
T Consensus 538 L~L~~N~l~~~~ 549 (567)
T 1dce_A 538 LNLQGNSLCQEE 549 (567)
T ss_dssp EECTTSGGGGSS
T ss_pred EEecCCcCCCCc
Confidence 556666665543
No 281
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.18 E-value=4.8e-11 Score=106.26 Aligned_cols=93 Identities=23% Similarity=0.304 Sum_probs=74.6
Q ss_pred CCCCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCCc---CCCccce
Q 012219 2 NCSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPES---VRKVPHL 78 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~---~~~l~~l 78 (468)
++++|+.|+|++|+|++..+..|+++++|++|+|++|+|++..+..|.++++|+.|+|++|++++..|.. +.+|+.|
T Consensus 50 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 129 (208)
T 2o6s_A 50 ELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDL 129 (208)
T ss_dssp TCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred ccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEE
Confidence 5789999999999999554556789999999999999999666666899999999999999999544433 4567778
Q ss_pred ecccccccccCCCCCC
Q 012219 79 YVYGKNFDVEIPNTSE 94 (468)
Q Consensus 79 ~~~~n~l~~~~p~~~~ 94 (468)
++++|.+....+..+.
T Consensus 130 ~l~~N~l~~~~~~~~~ 145 (208)
T 2o6s_A 130 RLYQNQLKSVPDGVFD 145 (208)
T ss_dssp ECCSSCCSCCCTTTTT
T ss_pred ECCCCccceeCHHHhc
Confidence 8999988865554343
No 282
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.18 E-value=6.8e-11 Score=105.27 Aligned_cols=92 Identities=15% Similarity=0.163 Sum_probs=74.5
Q ss_pred CCCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCCc---CCCcccee
Q 012219 3 CSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPES---VRKVPHLY 79 (468)
Q Consensus 3 l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~---~~~l~~l~ 79 (468)
.++|+.|+|++|++++..+..|+++++|++|+|++|+|++..+..|.++++|++|+|++|++++..|.. +.+|+.|+
T Consensus 27 ~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 106 (208)
T 2o6s_A 27 PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELA 106 (208)
T ss_dssp CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEE
Confidence 457999999999999655566899999999999999999666666899999999999999999544433 45677788
Q ss_pred cccccccccCCCCCC
Q 012219 80 VYGKNFDVEIPNTSE 94 (468)
Q Consensus 80 ~~~n~l~~~~p~~~~ 94 (468)
+++|.+....+..+.
T Consensus 107 L~~N~l~~~~~~~~~ 121 (208)
T 2o6s_A 107 LNTNQLQSLPDGVFD 121 (208)
T ss_dssp CCSSCCCCCCTTTTT
T ss_pred cCCCcCcccCHhHhc
Confidence 999998876554443
No 283
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.18 E-value=6.1e-11 Score=108.96 Aligned_cols=92 Identities=21% Similarity=0.234 Sum_probs=64.6
Q ss_pred CCCCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCCc---CCCccce
Q 012219 2 NCSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPES---VRKVPHL 78 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~---~~~l~~l 78 (468)
++++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..|..|.++++|+.|+|++|++++..|.. +.+|+.|
T Consensus 57 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 136 (251)
T 3m19_A 57 GLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKEL 136 (251)
T ss_dssp TCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEE
Confidence 4677888888888888666666788888888888888887666666777788888888888877433332 3455667
Q ss_pred ecccccccccCCCCC
Q 012219 79 YVYGKNFDVEIPNTS 93 (468)
Q Consensus 79 ~~~~n~l~~~~p~~~ 93 (468)
++++|.+....+..+
T Consensus 137 ~Ls~N~l~~~~~~~~ 151 (251)
T 3m19_A 137 RLNTNQLQSIPAGAF 151 (251)
T ss_dssp ECCSSCCCCCCTTTT
T ss_pred ECcCCcCCccCHHHc
Confidence 777777765554333
No 284
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.17 E-value=8.2e-11 Score=101.90 Aligned_cols=87 Identities=17% Similarity=0.335 Sum_probs=69.5
Q ss_pred CCCCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCC-c---CCCccc
Q 012219 2 NCSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPE-S---VRKVPH 77 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~-~---~~~l~~ 77 (468)
++++|+.|+|++|+|++..+..|+++++|++|+|++|+|++..|..+.++++|+.|+|++|++++ +|. . +.++..
T Consensus 50 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~-~~~~~~~~l~~L~~ 128 (177)
T 2o6r_A 50 KLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKS-VPDGIFDRLTSLQK 128 (177)
T ss_dssp TCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSC-CCTTTTTTCTTCCE
T ss_pred CcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceE-eCHHHhcCCcccCE
Confidence 57889999999999985555567899999999999999997666668899999999999999984 554 2 345667
Q ss_pred eecccccccccC
Q 012219 78 LYVYGKNFDVEI 89 (468)
Q Consensus 78 l~~~~n~l~~~~ 89 (468)
|++++|++.+.+
T Consensus 129 L~l~~N~~~~~~ 140 (177)
T 2o6r_A 129 IWLHTNPWDCSC 140 (177)
T ss_dssp EECCSSCBCCCH
T ss_pred EEecCCCeeccC
Confidence 888888887643
No 285
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.17 E-value=5.6e-11 Score=110.57 Aligned_cols=94 Identities=22% Similarity=0.321 Sum_probs=77.7
Q ss_pred CCCCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCCc---CCCccce
Q 012219 2 NCSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPES---VRKVPHL 78 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~---~~~l~~l 78 (468)
++++|+.|+|++|++++..|..|+++++|++|+|++|++++..|..++++++|+.|+|++|++++..|.. +.+|+.|
T Consensus 107 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 186 (272)
T 3rfs_A 107 KLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDL 186 (272)
T ss_dssp TCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEE
Confidence 5789999999999999666667899999999999999999777777899999999999999999655543 4567778
Q ss_pred ecccccccccCCCCCCC
Q 012219 79 YVYGKNFDVEIPNTSEN 95 (468)
Q Consensus 79 ~~~~n~l~~~~p~~~~~ 95 (468)
++++|.+.+..|..+..
T Consensus 187 ~L~~N~l~~~~~~~~~~ 203 (272)
T 3rfs_A 187 RLYQNQLKSVPDGVFDR 203 (272)
T ss_dssp ECCSSCCSCCCTTTTTT
T ss_pred ECCCCcCCccCHHHHhC
Confidence 89999998766654443
No 286
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.16 E-value=3.4e-11 Score=101.11 Aligned_cols=83 Identities=20% Similarity=0.366 Sum_probs=68.6
Q ss_pred CCCCcEEEccCCccc-ccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCCc---CCCccce
Q 012219 3 CSKLRVLELGNNLLS-GSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPES---VRKVPHL 78 (468)
Q Consensus 3 l~~l~~l~l~~N~l~-g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~---~~~l~~l 78 (468)
.++|+.|+|++|+++ |.+|..++.+++|++|+|++|++++. ..++++++|+.|+|++|++++.+|.. +.++..|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 467888999999988 78888888889999999999988865 67888889999999999988667763 5677778
Q ss_pred ecccccccc
Q 012219 79 YVYGKNFDV 87 (468)
Q Consensus 79 ~~~~n~l~~ 87 (468)
++++|.+..
T Consensus 94 ~ls~N~i~~ 102 (149)
T 2je0_A 94 NLSGNKIKD 102 (149)
T ss_dssp ECTTSCCCS
T ss_pred ECCCCcCCC
Confidence 888888766
No 287
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.16 E-value=8.5e-11 Score=109.36 Aligned_cols=94 Identities=16% Similarity=0.147 Sum_probs=78.9
Q ss_pred CCCCCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCCc---CCCccc
Q 012219 1 MNCSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPES---VRKVPH 77 (468)
Q Consensus 1 ~~l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~---~~~l~~ 77 (468)
+++++|++|+|++|++++..|..|+++++|++|+|++|++++..|..|+++++|+.|+|++|++++..|.. +.+|+.
T Consensus 82 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 161 (272)
T 3rfs_A 82 KELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTE 161 (272)
T ss_dssp TTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred cCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCE
Confidence 36889999999999999766677899999999999999999777777999999999999999999655543 456777
Q ss_pred eecccccccccCCCCCC
Q 012219 78 LYVYGKNFDVEIPNTSE 94 (468)
Q Consensus 78 l~~~~n~l~~~~p~~~~ 94 (468)
|++++|.+....+..+.
T Consensus 162 L~l~~n~l~~~~~~~~~ 178 (272)
T 3rfs_A 162 LDLSYNQLQSLPEGVFD 178 (272)
T ss_dssp EECCSSCCCCCCTTTTT
T ss_pred EECCCCCcCccCHHHhc
Confidence 89999999876654443
No 288
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.14 E-value=1.7e-11 Score=128.25 Aligned_cols=90 Identities=20% Similarity=0.395 Sum_probs=80.4
Q ss_pred CCCCCCcEEEccCCccccc-----------------CCcccc--cCCCCCEeeccCccccccccccccCCCCCceecccC
Q 012219 1 MNCSKLRVLELGNNLLSGS-----------------IPSEIN--KLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSM 61 (468)
Q Consensus 1 ~~l~~l~~l~l~~N~l~g~-----------------~p~~~~--~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~ 61 (468)
+++++|+.|+|++|+|+|. +|+.++ ++++|++|+|++|+++|.+|..|++|++|+.|+|++
T Consensus 203 ~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~ 282 (636)
T 4eco_A 203 MRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVAC 282 (636)
T ss_dssp GGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTT
T ss_pred hcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcC
Confidence 3688999999999999986 999999 999999999999999999999999999999999999
Q ss_pred cc-ccc-ccCCcC---------CCccceecccccccccCCC
Q 012219 62 NN-LSG-SIPESV---------RKVPHLYVYGKNFDVEIPN 91 (468)
Q Consensus 62 N~-l~g-~~p~~~---------~~l~~l~~~~n~l~~~~p~ 91 (468)
|+ ++| .+|..+ .+|+.|++++|.+. .+|.
T Consensus 283 n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~ 322 (636)
T 4eco_A 283 NRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPV 322 (636)
T ss_dssp CTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCC
T ss_pred CCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCc
Confidence 98 998 888754 56777889999988 6776
No 289
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.14 E-value=4.1e-11 Score=114.68 Aligned_cols=93 Identities=16% Similarity=0.253 Sum_probs=64.1
Q ss_pred CCCCCcEEEccCCcccccCCccccc---------CCCCCEeeccCccccccccccccCCCCCceecccCcccccccCCcC
Q 012219 2 NCSKLRVLELGNNLLSGSIPSEINK---------LQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPESV 72 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g~~p~~~~~---------l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~ 72 (468)
++++|+.|+|++|++.|.+|..++. +++|++|+|++|+|+ .+|..++++++|+.|+|++|+++ .+|..+
T Consensus 148 ~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~-~l~~~l 225 (328)
T 4fcg_A 148 SLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS-ALGPAI 225 (328)
T ss_dssp GCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCC-CCCGGG
T ss_pred cCcCCCEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCC-cCchhh
Confidence 4667777777777777777776654 777777777777777 77777777777777777777777 355543
Q ss_pred ---CCccceecccccccccCCCCCCCC
Q 012219 73 ---RKVPHLYVYGKNFDVEIPNTSENS 96 (468)
Q Consensus 73 ---~~l~~l~~~~n~l~~~~p~~~~~~ 96 (468)
.+|..|++++|++.+.+|......
T Consensus 226 ~~l~~L~~L~Ls~n~~~~~~p~~~~~l 252 (328)
T 4fcg_A 226 HHLPKLEELDLRGCTALRNYPPIFGGR 252 (328)
T ss_dssp GGCTTCCEEECTTCTTCCBCCCCTTCC
T ss_pred ccCCCCCEEECcCCcchhhhHHHhcCC
Confidence 345556677777777666655443
No 290
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.13 E-value=6.7e-11 Score=104.42 Aligned_cols=84 Identities=20% Similarity=0.361 Sum_probs=42.4
Q ss_pred CCCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCC--cCCCccceec
Q 012219 3 CSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPE--SVRKVPHLYV 80 (468)
Q Consensus 3 l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~--~~~~l~~l~~ 80 (468)
+++|+.|+|++|++++..|..|+.+++|++|+|++|++++..|..++++++|+.|+|++|++.+.+|. .+.+|+.|++
T Consensus 87 l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~~l~~l~~L~~L~l 166 (197)
T 4ezg_A 87 LSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIMPLKTLPELKSLNI 166 (197)
T ss_dssp CTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCGGGGGCSSCCEEEC
T ss_pred CCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCccccHhhcCCCCCCEEEC
Confidence 45555555555555544555555555555555555555554555555555555555555552223442 2233444455
Q ss_pred cccccc
Q 012219 81 YGKNFD 86 (468)
Q Consensus 81 ~~n~l~ 86 (468)
++|.+.
T Consensus 167 ~~n~i~ 172 (197)
T 4ezg_A 167 QFDGVH 172 (197)
T ss_dssp TTBCCC
T ss_pred CCCCCc
Confidence 555443
No 291
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.13 E-value=4.8e-11 Score=100.23 Aligned_cols=85 Identities=21% Similarity=0.278 Sum_probs=73.7
Q ss_pred CCCCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccc-cCCc---CCCccc
Q 012219 2 NCSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGS-IPES---VRKVPH 77 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~-~p~~---~~~l~~ 77 (468)
++++|+.|+|++|++++. +.++++++|++|+|++|++++.+|..+.++++|+.|++++|++++. .|.. +.++..
T Consensus 40 ~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~l~~L~~ 117 (149)
T 2je0_A 40 EFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKS 117 (149)
T ss_dssp TCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEECTTSCCCSHHHHGGGGGCTTCCE
T ss_pred hcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEECCCCcCCChHHHHHHhhCCCCCE
Confidence 578999999999999955 7899999999999999999988999899999999999999999962 3344 456677
Q ss_pred eeccccccccc
Q 012219 78 LYVYGKNFDVE 88 (468)
Q Consensus 78 l~~~~n~l~~~ 88 (468)
|++++|.+...
T Consensus 118 L~l~~N~l~~~ 128 (149)
T 2je0_A 118 LDLFNCEVTNL 128 (149)
T ss_dssp EECTTCGGGGS
T ss_pred EeCcCCcccch
Confidence 88999988764
No 292
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.13 E-value=1.4e-10 Score=108.99 Aligned_cols=87 Identities=24% Similarity=0.261 Sum_probs=52.7
Q ss_pred CCCCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCCc---CCCccce
Q 012219 2 NCSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPES---VRKVPHL 78 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~---~~~l~~l 78 (468)
++++|+.|+|++|+|+ .+|..+.++++|++|+|++|+|++..|..|.++++|+.|+|++|++++..|.. +.+|+.|
T Consensus 75 ~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 153 (290)
T 1p9a_G 75 TLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKL 153 (290)
T ss_dssp CCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEE
Confidence 3556666666666666 66666666666666666666666555555666666666666666666332222 2345556
Q ss_pred ecccccccccC
Q 012219 79 YVYGKNFDVEI 89 (468)
Q Consensus 79 ~~~~n~l~~~~ 89 (468)
++++|++....
T Consensus 154 ~L~~N~l~~l~ 164 (290)
T 1p9a_G 154 SLANNNLTELP 164 (290)
T ss_dssp ECTTSCCSCCC
T ss_pred ECCCCcCCccC
Confidence 66666665433
No 293
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.12 E-value=1.9e-10 Score=111.61 Aligned_cols=142 Identities=18% Similarity=0.290 Sum_probs=105.4
Q ss_pred cceeeeeCCceEEEEEcCCCCEEEEEEec--CcchhhhhhHHHHHHHHHHHhhcc--CCceeeEEEEEeeC---CEEEEE
Q 012219 175 KYCIGTGGYGSVYRARLPSGKVVALKKLH--RSETEELASLESFGNEARLLSQIR--HRNIVKLYGFCLHR---KCMFLI 247 (468)
Q Consensus 175 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~--~~~~~~~~~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~---~~~~lv 247 (468)
.+.++.|.++.||+....+ ..+++|+.. ..... .....+.+|+++++.+. +..+.++++++.+. +..++|
T Consensus 43 ~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~--~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~v 119 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLL--PSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYI 119 (359)
T ss_dssp EEECCC-CCSCEEEEECSS-CEEEEECCCC------------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEE
T ss_pred EEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCC--CcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEE
Confidence 4568999999999998754 678888776 32211 12246778999999987 45678899998776 447899
Q ss_pred EEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcC-----------------------------------
Q 012219 248 YEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDC----------------------------------- 292 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~----------------------------------- 292 (468)
|||++|..+.+... ..++..++..++.+++..|+.||...
T Consensus 120 me~v~G~~l~~~~~-----~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (359)
T 3dxp_A 120 MEFVSGRVLWDQSL-----PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESI 194 (359)
T ss_dssp EECCCCBCCCCTTC-----TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCC
T ss_pred EEecCCeecCCCcc-----ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCC
Confidence 99999987754211 12677888899999999999999621
Q ss_pred --------------------CCCeEecCCCCCceeeCCCCC--eEEeecccccc
Q 012219 293 --------------------TPPIVHRDISSNNVLLNSELE--AFVADFGVARL 324 (468)
Q Consensus 293 --------------------~~~ivH~dlk~~NIll~~~~~--~kl~Dfg~~~~ 324 (468)
...++|||+++.||+++.++. +.|.||+.+..
T Consensus 195 ~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 195 PAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred hHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 257999999999999998753 58999998864
No 294
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.12 E-value=2.8e-11 Score=128.05 Aligned_cols=90 Identities=23% Similarity=0.382 Sum_probs=58.2
Q ss_pred CCCCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCCcCC---Cccce
Q 012219 2 NCSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPESVR---KVPHL 78 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~~---~l~~l 78 (468)
++++|+.|+|++|+|+ .+|..+++|++|++|+|++|+|+ .+|..|++|++|+.|+|++|+|+ .+|..++ +|..|
T Consensus 222 ~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L 298 (727)
T 4b8c_D 222 DDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYF 298 (727)
T ss_dssp CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEE
T ss_pred cCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEE
Confidence 3566777777777776 66666667777777777777776 66766777777777777777777 6666543 34445
Q ss_pred ecccccccccCCCCCCC
Q 012219 79 YVYGKNFDVEIPNTSEN 95 (468)
Q Consensus 79 ~~~~n~l~~~~p~~~~~ 95 (468)
++++|.+. .+|..+..
T Consensus 299 ~L~~N~l~-~lp~~~~~ 314 (727)
T 4b8c_D 299 YFFDNMVT-TLPWEFGN 314 (727)
T ss_dssp ECCSSCCC-CCCSSTTS
T ss_pred ECCCCCCC-ccChhhhc
Confidence 66666664 44544433
No 295
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.10 E-value=1.5e-10 Score=99.34 Aligned_cols=84 Identities=27% Similarity=0.313 Sum_probs=57.8
Q ss_pred CCCCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccC--Cc---CCCcc
Q 012219 2 NCSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIP--ES---VRKVP 76 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p--~~---~~~l~ 76 (468)
++++|+.|+|++|.|++. ..++.+++|++|+|++|++++.+|..+.++++|+.|+|++|++++ +| .. +.+|.
T Consensus 47 ~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~~~~~l~~l~~L~ 123 (168)
T 2ell_A 47 EFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKD-ISTLEPLKKLECLK 123 (168)
T ss_dssp GGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEECBSSSCCS-SGGGGGGSSCSCCC
T ss_pred hCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEeccCCccCc-chhHHHHhcCCCCC
Confidence 356777777777777743 667777777777777777776677667777777777777777774 33 33 34455
Q ss_pred ceeccccccccc
Q 012219 77 HLYVYGKNFDVE 88 (468)
Q Consensus 77 ~l~~~~n~l~~~ 88 (468)
.|++++|.+...
T Consensus 124 ~L~l~~N~l~~~ 135 (168)
T 2ell_A 124 SLDLFNCEVTNL 135 (168)
T ss_dssp EEECCSSGGGTS
T ss_pred EEEeeCCcCcch
Confidence 667777776654
No 296
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.10 E-value=1.2e-10 Score=116.66 Aligned_cols=94 Identities=18% Similarity=0.185 Sum_probs=78.8
Q ss_pred CCCCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCCcC---CCccce
Q 012219 2 NCSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPESV---RKVPHL 78 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~---~~l~~l 78 (468)
++++|+.|+|++|++++..|..|+++++|++|+|++|++++..|..|.++++|+.|+|++|++++..|..+ .+|+.|
T Consensus 297 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 376 (455)
T 3v47_A 297 HFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKEL 376 (455)
T ss_dssp TCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEE
T ss_pred cCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEE
Confidence 57899999999999998888899999999999999999998888889999999999999999997777755 456668
Q ss_pred ecccccccccCCCCCCC
Q 012219 79 YVYGKNFDVEIPNTSEN 95 (468)
Q Consensus 79 ~~~~n~l~~~~p~~~~~ 95 (468)
++++|.+....+..+..
T Consensus 377 ~L~~N~l~~~~~~~~~~ 393 (455)
T 3v47_A 377 ALDTNQLKSVPDGIFDR 393 (455)
T ss_dssp ECCSSCCSCCCTTTTTT
T ss_pred ECCCCccccCCHhHhcc
Confidence 89999988755544433
No 297
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.10 E-value=1.9e-10 Score=98.92 Aligned_cols=90 Identities=16% Similarity=0.182 Sum_probs=75.2
Q ss_pred CCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCCc---CCCccceecc
Q 012219 5 KLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPES---VRKVPHLYVY 81 (468)
Q Consensus 5 ~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~---~~~l~~l~~~ 81 (468)
+.+.|++++|+|+ .+|..+. ++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..|.. +.+|+.|+++
T Consensus 10 ~~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 86 (170)
T 3g39_A 10 SGTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLN 86 (170)
T ss_dssp ETTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECC
Confidence 3688999999999 7998875 89999999999999888999999999999999999999544433 4567778999
Q ss_pred cccccccCCCCCCCCC
Q 012219 82 GKNFDVEIPNTSENSP 97 (468)
Q Consensus 82 ~n~l~~~~p~~~~~~~ 97 (468)
+|.+....+..+...+
T Consensus 87 ~N~l~~~~~~~~~~l~ 102 (170)
T 3g39_A 87 DNQLKSIPRGAFDNLK 102 (170)
T ss_dssp SSCCCCCCTTTTTTCT
T ss_pred CCccCEeCHHHhcCCC
Confidence 9999886665554433
No 298
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.10 E-value=2.8e-11 Score=129.60 Aligned_cols=90 Identities=18% Similarity=0.337 Sum_probs=78.8
Q ss_pred CCCCCCcEEEccCCcccc-----------------cCCcccc--cCCCCCEeeccCccccccccccccCCCCCceecccC
Q 012219 1 MNCSKLRVLELGNNLLSG-----------------SIPSEIN--KLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSM 61 (468)
Q Consensus 1 ~~l~~l~~l~l~~N~l~g-----------------~~p~~~~--~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~ 61 (468)
++|++|+.|+|++|+|+| .+|+.++ +|++|++|+|++|++.|.+|..|++|++|+.|+|++
T Consensus 445 ~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~ 524 (876)
T 4ecn_A 445 QRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIAC 524 (876)
T ss_dssp GGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTT
T ss_pred hcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcC
Confidence 368899999999999998 4999988 999999999999999999999999999999999999
Q ss_pred cc-ccc-ccCCcCC----------CccceecccccccccCCC
Q 012219 62 NN-LSG-SIPESVR----------KVPHLYVYGKNFDVEIPN 91 (468)
Q Consensus 62 N~-l~g-~~p~~~~----------~l~~l~~~~n~l~~~~p~ 91 (468)
|+ ++| .+|..+. +|+.|++++|.+. .+|.
T Consensus 525 N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~ 565 (876)
T 4ecn_A 525 NRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPA 565 (876)
T ss_dssp CTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCC
T ss_pred CCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCC
Confidence 98 998 7887443 6777889999988 6776
No 299
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.09 E-value=2.3e-10 Score=98.78 Aligned_cols=87 Identities=17% Similarity=0.245 Sum_probs=73.9
Q ss_pred CcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCC----cCCCccceecc
Q 012219 6 LRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPE----SVRKVPHLYVY 81 (468)
Q Consensus 6 l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~----~~~~l~~l~~~ 81 (468)
-+.+++++|+|+ .+|..+. ++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++ +|. .+.+|+.|+++
T Consensus 14 ~~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-i~~~~~~~l~~L~~L~L~ 89 (174)
T 2r9u_A 14 QTLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTA-IPTGVFDKLTQLTQLDLN 89 (174)
T ss_dssp SSEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECC
T ss_pred CcEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCc-cChhHhCCcchhhEEECC
Confidence 478999999998 9999886 899999999999998889999999999999999999995 554 34567788999
Q ss_pred cccccccCCCCCCCC
Q 012219 82 GKNFDVEIPNTSENS 96 (468)
Q Consensus 82 ~n~l~~~~p~~~~~~ 96 (468)
+|.+....+..+...
T Consensus 90 ~N~l~~l~~~~~~~l 104 (174)
T 2r9u_A 90 DNHLKSIPRGAFDNL 104 (174)
T ss_dssp SSCCCCCCTTTTTTC
T ss_pred CCccceeCHHHhccc
Confidence 999987655444443
No 300
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.09 E-value=8.8e-11 Score=100.75 Aligned_cols=85 Identities=22% Similarity=0.355 Sum_probs=76.2
Q ss_pred CCCCCcEEEccCCccc-ccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCCc---CCCccc
Q 012219 2 NCSKLRVLELGNNLLS-GSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPES---VRKVPH 77 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~-g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~---~~~l~~ 77 (468)
..++|+.|+|++|+++ |.+|..+..+++|+.|+|++|++++. ..+..+++|+.|+|++|++++.+|.. +.+|+.
T Consensus 22 ~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 99 (168)
T 2ell_A 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTH 99 (168)
T ss_dssp CTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCE
T ss_pred CcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCE
Confidence 3578999999999998 89999999999999999999999965 78999999999999999999767763 667888
Q ss_pred eeccccccccc
Q 012219 78 LYVYGKNFDVE 88 (468)
Q Consensus 78 l~~~~n~l~~~ 88 (468)
|++++|.+...
T Consensus 100 L~Ls~N~l~~~ 110 (168)
T 2ell_A 100 LNLSGNKLKDI 110 (168)
T ss_dssp EECBSSSCCSS
T ss_pred EeccCCccCcc
Confidence 99999998764
No 301
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.08 E-value=2.3e-10 Score=107.51 Aligned_cols=86 Identities=22% Similarity=0.309 Sum_probs=74.6
Q ss_pred CCCCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCC----cCCCccc
Q 012219 2 NCSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPE----SVRKVPH 77 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~----~~~~l~~ 77 (468)
++++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|+|+ .+|. .+.+|+.
T Consensus 98 ~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~ 176 (290)
T 1p9a_G 98 TLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLT-ELPAGLLNGLENLDT 176 (290)
T ss_dssp TCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCS-CCCTTTTTTCTTCCE
T ss_pred cCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCC-ccCHHHhcCcCCCCE
Confidence 5789999999999999666678999999999999999999776677899999999999999999 5665 3456778
Q ss_pred eeccccccccc
Q 012219 78 LYVYGKNFDVE 88 (468)
Q Consensus 78 l~~~~n~l~~~ 88 (468)
|++++|.+...
T Consensus 177 L~L~~N~l~~i 187 (290)
T 1p9a_G 177 LLLQENSLYTI 187 (290)
T ss_dssp EECCSSCCCCC
T ss_pred EECCCCcCCcc
Confidence 89999998743
No 302
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.08 E-value=1.8e-10 Score=108.97 Aligned_cols=95 Identities=16% Similarity=0.218 Sum_probs=81.3
Q ss_pred CCCCCcEEEccCCcccc-cCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCCc---CCCccc
Q 012219 2 NCSKLRVLELGNNLLSG-SIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPES---VRKVPH 77 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g-~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~---~~~l~~ 77 (468)
++++|+.|+|++|++++ .+|..++.+++|++|+|++|++++..|..|.++++|+.|+|++|++++..+.. +.+|+.
T Consensus 148 ~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 227 (306)
T 2z66_A 148 GLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQV 227 (306)
T ss_dssp TCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCE
T ss_pred cCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCE
Confidence 57899999999999997 58899999999999999999999888889999999999999999999544434 456777
Q ss_pred eecccccccccCCCCCCCC
Q 012219 78 LYVYGKNFDVEIPNTSENS 96 (468)
Q Consensus 78 l~~~~n~l~~~~p~~~~~~ 96 (468)
|++++|.+.+..|......
T Consensus 228 L~L~~N~l~~~~~~~~~~~ 246 (306)
T 2z66_A 228 LDYSLNHIMTSKKQELQHF 246 (306)
T ss_dssp EECTTSCCCBCSSSSCCCC
T ss_pred eECCCCCCcccCHHHHHhh
Confidence 8999999988877665554
No 303
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.08 E-value=2.5e-10 Score=114.36 Aligned_cols=94 Identities=16% Similarity=0.122 Sum_probs=77.8
Q ss_pred CCCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCCc---CCCcccee
Q 012219 3 CSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPES---VRKVPHLY 79 (468)
Q Consensus 3 l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~---~~~l~~l~ 79 (468)
+++|+.|+|++|++++.+|..|+++++|+.|+|++|++++..|..|.++++|+.|+|++|++++..|.. +.+|+.|+
T Consensus 274 ~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 353 (455)
T 3v47_A 274 ASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLD 353 (455)
T ss_dssp TSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEE
T ss_pred ccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEE
Confidence 368999999999999888888999999999999999999888888999999999999999998665655 45566788
Q ss_pred cccccccccCCCCCCCC
Q 012219 80 VYGKNFDVEIPNTSENS 96 (468)
Q Consensus 80 ~~~n~l~~~~p~~~~~~ 96 (468)
+++|.+....|..+...
T Consensus 354 Ls~N~l~~~~~~~~~~l 370 (455)
T 3v47_A 354 LSYNHIRALGDQSFLGL 370 (455)
T ss_dssp CCSSCCCEECTTTTTTC
T ss_pred CCCCcccccChhhcccc
Confidence 99998887767655443
No 304
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.07 E-value=1.8e-10 Score=120.25 Aligned_cols=89 Identities=17% Similarity=0.097 Sum_probs=58.6
Q ss_pred CCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCCc---CCCccceecc
Q 012219 5 KLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPES---VRKVPHLYVY 81 (468)
Q Consensus 5 ~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~---~~~l~~l~~~ 81 (468)
+++.|||++|+|++..|.+|.+|++|++|+|++|+|++..|.+|.+|++|++|+|++|+|++..|.. +.+|+.|+++
T Consensus 53 ~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls 132 (635)
T 4g8a_A 53 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 132 (635)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECT
T ss_pred CCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECC
Confidence 5777777777777444556777777777777777777555666777777777777777777322232 3445566677
Q ss_pred cccccccCCCCC
Q 012219 82 GKNFDVEIPNTS 93 (468)
Q Consensus 82 ~n~l~~~~p~~~ 93 (468)
+|++....+..+
T Consensus 133 ~N~l~~l~~~~~ 144 (635)
T 4g8a_A 133 ETNLASLENFPI 144 (635)
T ss_dssp TSCCCCSTTCCC
T ss_pred CCcCCCCChhhh
Confidence 777665544333
No 305
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.07 E-value=1.9e-10 Score=111.58 Aligned_cols=85 Identities=26% Similarity=0.241 Sum_probs=38.9
Q ss_pred CcEEEccCCcccccCCcccc-cCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCCc---CCCccceecc
Q 012219 6 LRVLELGNNLLSGSIPSEIN-KLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPES---VRKVPHLYVY 81 (468)
Q Consensus 6 l~~l~l~~N~l~g~~p~~~~-~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~---~~~l~~l~~~ 81 (468)
|+.|+|++|+|++..+..|. ++++|++|+|++|+|++..|..|.+|++|+.|+|++|+|++..|.. +.+|..|+++
T Consensus 41 l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 120 (361)
T 2xot_A 41 TALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLY 120 (361)
T ss_dssp CSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECC
Confidence 44555555555533333343 4555555555555555444444555555555555555554222222 2233344455
Q ss_pred cccccccCC
Q 012219 82 GKNFDVEIP 90 (468)
Q Consensus 82 ~n~l~~~~p 90 (468)
+|.+....|
T Consensus 121 ~N~i~~~~~ 129 (361)
T 2xot_A 121 NNHIVVVDR 129 (361)
T ss_dssp SSCCCEECT
T ss_pred CCcccEECH
Confidence 554444333
No 306
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.07 E-value=2.4e-10 Score=108.13 Aligned_cols=91 Identities=19% Similarity=0.184 Sum_probs=79.2
Q ss_pred CCCCCcEEEccCCcccccCCcccccCCCCCEeeccCccccc-cccccccCCCCCceecccCcccccccCCcCC---Cccc
Q 012219 2 NCSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSING-KILSQLGEIPRIDTVDLSMNNLSGSIPESVR---KVPH 77 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g-~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~~---~l~~ 77 (468)
++++|+.|+|++|.+++..|..|+++++|++|+|++|++++ .+|..+.++++|+.|+|++|++++..|..+. +|+.
T Consensus 124 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~ 203 (306)
T 2z66_A 124 SLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQV 203 (306)
T ss_dssp TCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred hccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCE
Confidence 57899999999999998888899999999999999999997 6889999999999999999999976677554 5667
Q ss_pred eecccccccccCCCC
Q 012219 78 LYVYGKNFDVEIPNT 92 (468)
Q Consensus 78 l~~~~n~l~~~~p~~ 92 (468)
|++++|.+....+..
T Consensus 204 L~L~~N~l~~~~~~~ 218 (306)
T 2z66_A 204 LNMSHNNFFSLDTFP 218 (306)
T ss_dssp EECTTSCCSBCCSGG
T ss_pred EECCCCccCccChhh
Confidence 889999987755433
No 307
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.06 E-value=1.9e-10 Score=111.67 Aligned_cols=90 Identities=17% Similarity=0.173 Sum_probs=76.9
Q ss_pred CCCCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCCcC---CCccce
Q 012219 2 NCSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPESV---RKVPHL 78 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~---~~l~~l 78 (468)
++++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.+|++|+.|+|++|++++..|..+ .+|..|
T Consensus 62 ~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L 141 (361)
T 2xot_A 62 RLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKL 141 (361)
T ss_dssp CCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEE
T ss_pred cccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEE
Confidence 68999999999999997667789999999999999999997777789999999999999999996656655 456678
Q ss_pred ecccccccccCCC
Q 012219 79 YVYGKNFDVEIPN 91 (468)
Q Consensus 79 ~~~~n~l~~~~p~ 91 (468)
++++|.+....+.
T Consensus 142 ~L~~N~l~~l~~~ 154 (361)
T 2xot_A 142 YLSQNQISRFPVE 154 (361)
T ss_dssp ECCSSCCCSCCGG
T ss_pred ECCCCcCCeeCHH
Confidence 8999998774433
No 308
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.05 E-value=4.2e-10 Score=105.35 Aligned_cols=92 Identities=17% Similarity=0.238 Sum_probs=65.9
Q ss_pred CCCCCcEEEccCCc-ccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCCc---CCCccc
Q 012219 2 NCSKLRVLELGNNL-LSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPES---VRKVPH 77 (468)
Q Consensus 2 ~l~~l~~l~l~~N~-l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~---~~~l~~ 77 (468)
++++|+.|+|++|. +++..|..|.++++|++|+|++|++++..|..+.++++|+.|+|++|++++..+.. +.+|+.
T Consensus 78 ~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 157 (285)
T 1ozn_A 78 GLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTH 157 (285)
T ss_dssp TCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred CccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccE
Confidence 46778888888886 66444677888888888888888888776777888888888888888888433333 345666
Q ss_pred eecccccccccCCCCC
Q 012219 78 LYVYGKNFDVEIPNTS 93 (468)
Q Consensus 78 l~~~~n~l~~~~p~~~ 93 (468)
|++++|.+....+..+
T Consensus 158 L~l~~n~l~~~~~~~~ 173 (285)
T 1ozn_A 158 LFLHGNRISSVPERAF 173 (285)
T ss_dssp EECCSSCCCEECTTTT
T ss_pred EECCCCcccccCHHHh
Confidence 7777777765544333
No 309
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.04 E-value=5.5e-10 Score=103.70 Aligned_cols=91 Identities=16% Similarity=0.253 Sum_probs=61.8
Q ss_pred CCCCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCC-c---CCCccc
Q 012219 2 NCSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPE-S---VRKVPH 77 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~-~---~~~l~~ 77 (468)
++++|+.|+|++|++++..+..|.++++|++|+|++|++++..|..|.++++|+.|+|++|++++ +|. . +.+|+.
T Consensus 83 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~~~~~~~l~~L~~ 161 (270)
T 2o6q_A 83 ELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQS-LPKGVFDKLTSLKE 161 (270)
T ss_dssp SCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCE
T ss_pred CCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCc-cCHhHccCCcccce
Confidence 46778888888888875444556777788888888888776666667777777777777777774 443 2 345556
Q ss_pred eecccccccccCCCCC
Q 012219 78 LYVYGKNFDVEIPNTS 93 (468)
Q Consensus 78 l~~~~n~l~~~~p~~~ 93 (468)
|++++|.+....+..+
T Consensus 162 L~L~~n~l~~~~~~~~ 177 (270)
T 2o6q_A 162 LRLYNNQLKRVPEGAF 177 (270)
T ss_dssp EECCSSCCSCCCTTTT
T ss_pred eEecCCcCcEeChhHh
Confidence 6777777665544333
No 310
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.04 E-value=5.7e-10 Score=103.61 Aligned_cols=92 Identities=20% Similarity=0.295 Sum_probs=75.4
Q ss_pred CCCCCcEEEccCCcccccCCc-ccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCCc---CCCccc
Q 012219 2 NCSKLRVLELGNNLLSGSIPS-EINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPES---VRKVPH 77 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g~~p~-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~---~~~l~~ 77 (468)
++++|+.|+|++|+|+ .+|. .|.++++|++|+|++|++++..+..|.++++|+.|+|++|++++..|.. +.+|+.
T Consensus 59 ~l~~L~~L~l~~n~l~-~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 137 (270)
T 2o6q_A 59 RLTKLRLLYLNDNKLQ-TLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTY 137 (270)
T ss_dssp SCTTCCEEECCSSCCS-CCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred CCCCCCEEECCCCccC-eeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCE
Confidence 6789999999999999 5554 5788999999999999999766667899999999999999999655544 456777
Q ss_pred eecccccccccCCCCCC
Q 012219 78 LYVYGKNFDVEIPNTSE 94 (468)
Q Consensus 78 l~~~~n~l~~~~p~~~~ 94 (468)
|++++|.+....+..+.
T Consensus 138 L~Ls~n~l~~~~~~~~~ 154 (270)
T 2o6q_A 138 LSLGYNELQSLPKGVFD 154 (270)
T ss_dssp EECCSSCCCCCCTTTTT
T ss_pred EECCCCcCCccCHhHcc
Confidence 88999998876554443
No 311
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.03 E-value=3.2e-10 Score=120.00 Aligned_cols=88 Identities=25% Similarity=0.371 Sum_probs=80.1
Q ss_pred CCCCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCCcCCC---ccce
Q 012219 2 NCSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPESVRK---VPHL 78 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~~~---l~~l 78 (468)
+|++|+.|+|++|+|+ .+|..|++|++|++|+|++|+|+ .+|..|++|++|+.|+|++|+|+ .+|..+++ |..|
T Consensus 245 ~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L 321 (727)
T 4b8c_D 245 KYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFL 321 (727)
T ss_dssp GCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCE
T ss_pred CCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEE
Confidence 5889999999999999 99999999999999999999999 88999999999999999999998 89987654 5568
Q ss_pred ecccccccccCCCC
Q 012219 79 YVYGKNFDVEIPNT 92 (468)
Q Consensus 79 ~~~~n~l~~~~p~~ 92 (468)
++++|.+.+.+|..
T Consensus 322 ~L~~N~l~~~~p~~ 335 (727)
T 4b8c_D 322 GVEGNPLEKQFLKI 335 (727)
T ss_dssp ECTTSCCCSHHHHH
T ss_pred eCCCCccCCCChHH
Confidence 89999998876644
No 312
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.03 E-value=2.5e-10 Score=98.76 Aligned_cols=81 Identities=17% Similarity=0.266 Sum_probs=60.8
Q ss_pred CCCCCcEEEccCCcccccCCcccccCC-CCCEeeccCccccccccccccCCCCCceecccCcccccccCC----cCCCcc
Q 012219 2 NCSKLRVLELGNNLLSGSIPSEINKLQ-ELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPE----SVRKVP 76 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g~~p~~~~~l~-~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~----~~~~l~ 76 (468)
++++|+.|+|++|+++ .+|. +..+. +|++|+|++|+|++. ..|..+++|+.|+|++|+++ .+|. .+.+|.
T Consensus 17 ~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~ 91 (176)
T 1a9n_A 17 NAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRIC-RIGEGLDQALPDLT 91 (176)
T ss_dssp CTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCC-EECSCHHHHCTTCC
T ss_pred CcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCccc-ccCcchhhcCCCCC
Confidence 4677888888888888 5654 55554 888888888888854 57888888888888888888 4554 345677
Q ss_pred ceecccccccc
Q 012219 77 HLYVYGKNFDV 87 (468)
Q Consensus 77 ~l~~~~n~l~~ 87 (468)
.|++++|.+..
T Consensus 92 ~L~L~~N~i~~ 102 (176)
T 1a9n_A 92 ELILTNNSLVE 102 (176)
T ss_dssp EEECCSCCCCC
T ss_pred EEECCCCcCCc
Confidence 77888887743
No 313
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.02 E-value=2.9e-10 Score=118.21 Aligned_cols=91 Identities=14% Similarity=0.196 Sum_probs=73.9
Q ss_pred CCCCCcEEEccCCcccc-cCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCCcCC---Cccc
Q 012219 2 NCSKLRVLELGNNLLSG-SIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPESVR---KVPH 77 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g-~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~~---~l~~ 77 (468)
++++|+.|+|++|++++ .+|..|+++++|+.|+|++|++++..|..|.++++|+.|+|++|++++.+|..+. +|+.
T Consensus 446 ~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 525 (606)
T 3vq2_A 446 GLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLST 525 (606)
T ss_dssp TCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCE
T ss_pred CCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCE
Confidence 57889999999999987 4788888999999999999999988888889999999999999999877787654 4556
Q ss_pred eecccccccccCCCCC
Q 012219 78 LYVYGKNFDVEIPNTS 93 (468)
Q Consensus 78 l~~~~n~l~~~~p~~~ 93 (468)
|++++|++.. +|...
T Consensus 526 L~l~~N~l~~-~p~~~ 540 (606)
T 3vq2_A 526 LDCSFNRIET-SKGIL 540 (606)
T ss_dssp EECTTSCCCC-EESCG
T ss_pred EECCCCcCcc-cCHhH
Confidence 7888888873 44433
No 314
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.02 E-value=6.8e-10 Score=103.91 Aligned_cols=91 Identities=16% Similarity=0.137 Sum_probs=60.6
Q ss_pred CCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcc-cccccCCcC---CCcccee
Q 012219 4 SKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNN-LSGSIPESV---RKVPHLY 79 (468)
Q Consensus 4 ~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~-l~g~~p~~~---~~l~~l~ 79 (468)
++|+.|+|++|++++..|..|+++++|++|+|++|++++..|..|.++++|+.|+|++|+ +++..|..+ .+|+.|+
T Consensus 32 ~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~ 111 (285)
T 1ozn_A 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH 111 (285)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEE
T ss_pred CCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEE
Confidence 467777777777775555667777777777777777776667777777777777777776 553334433 3455566
Q ss_pred cccccccccCCCCCC
Q 012219 80 VYGKNFDVEIPNTSE 94 (468)
Q Consensus 80 ~~~n~l~~~~p~~~~ 94 (468)
+++|.+....|....
T Consensus 112 l~~n~l~~~~~~~~~ 126 (285)
T 1ozn_A 112 LDRCGLQELGPGLFR 126 (285)
T ss_dssp CTTSCCCCCCTTTTT
T ss_pred CCCCcCCEECHhHhh
Confidence 777776665554433
No 315
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.02 E-value=2.4e-10 Score=108.38 Aligned_cols=84 Identities=18% Similarity=0.272 Sum_probs=69.6
Q ss_pred CCCCCcEEEccCCcccccCCc----ccccCCCCCEeeccCccccccccccccCC---CCCceecccCcccccccCCcC-C
Q 012219 2 NCSKLRVLELGNNLLSGSIPS----EINKLQELNYLNLSHNSINGKILSQLGEI---PRIDTVDLSMNNLSGSIPESV-R 73 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g~~p~----~~~~l~~L~~L~l~~N~l~g~~p~~~~~l---~~L~~l~l~~N~l~g~~p~~~-~ 73 (468)
++++|+.|+|++|+|+ .+|. .++++++|++|+|++|+|++.+|..+..+ ++|+.|+|++|+|+ .+|..+ .
T Consensus 195 ~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~~ 272 (310)
T 4glp_A 195 KFPAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLPA 272 (310)
T ss_dssp SSCCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCCS
T ss_pred cCCCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhcC
Confidence 5788999999999997 5554 25788999999999999998888888777 69999999999999 788754 4
Q ss_pred Cccceecccccccc
Q 012219 74 KVPHLYVYGKNFDV 87 (468)
Q Consensus 74 ~l~~l~~~~n~l~~ 87 (468)
+|+.|++++|.+.+
T Consensus 273 ~L~~L~Ls~N~l~~ 286 (310)
T 4glp_A 273 KLRVLDLSSNRLNR 286 (310)
T ss_dssp CCSCEECCSCCCCS
T ss_pred CCCEEECCCCcCCC
Confidence 68888999998876
No 316
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.02 E-value=3.4e-10 Score=99.84 Aligned_cols=85 Identities=20% Similarity=0.409 Sum_probs=71.0
Q ss_pred CCCCCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCC--cCCCccce
Q 012219 1 MNCSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPE--SVRKVPHL 78 (468)
Q Consensus 1 ~~l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~--~~~~l~~l 78 (468)
++|++|+.|+|++|++++..|..++.+++|++|+|++|++.+.+| .+..+++|+.|++++|++++ +|. .+.+|+.|
T Consensus 109 ~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~-~~~l~~l~~L~~L 186 (197)
T 4ezg_A 109 SGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVHD-YRGIEDFPKLNQL 186 (197)
T ss_dssp TTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEECTTBCCCC-CTTGGGCSSCCEE
T ss_pred cCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEECCCCCCcC-hHHhccCCCCCEE
Confidence 368899999999999998899999999999999999999444777 79999999999999999995 553 45677788
Q ss_pred ecccccccc
Q 012219 79 YVYGKNFDV 87 (468)
Q Consensus 79 ~~~~n~l~~ 87 (468)
++++|++..
T Consensus 187 ~l~~N~i~~ 195 (197)
T 4ezg_A 187 YAFSQTIGG 195 (197)
T ss_dssp EECBC----
T ss_pred EeeCcccCC
Confidence 999998753
No 317
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.01 E-value=1.2e-10 Score=121.71 Aligned_cols=88 Identities=23% Similarity=0.384 Sum_probs=79.2
Q ss_pred CCCCCcEEEccCCcccccCCcccccCCCCCEeeccCcc-ccc-cccccccCC------CCCceecccCcccccccCC--c
Q 012219 2 NCSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNS-ING-KILSQLGEI------PRIDTVDLSMNNLSGSIPE--S 71 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~-l~g-~~p~~~~~l------~~L~~l~l~~N~l~g~~p~--~ 71 (468)
++++|+.|+|++|+++|.+|+.|+++++|++|+|++|+ ++| .+|..+++| ++|+.|+|++|+++ .+|. .
T Consensus 247 ~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~ 325 (636)
T 4eco_A 247 NLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETS 325 (636)
T ss_dssp GCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHH
T ss_pred ccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhh
Confidence 68999999999999999999999999999999999998 999 899998887 99999999999999 8998 5
Q ss_pred C---CCccceecccccccccCC
Q 012219 72 V---RKVPHLYVYGKNFDVEIP 90 (468)
Q Consensus 72 ~---~~l~~l~~~~n~l~~~~p 90 (468)
+ .+|+.|++++|.+.+.+|
T Consensus 326 l~~l~~L~~L~L~~N~l~g~ip 347 (636)
T 4eco_A 326 LQKMKKLGMLECLYNQLEGKLP 347 (636)
T ss_dssp HTTCTTCCEEECCSCCCEEECC
T ss_pred hccCCCCCEEeCcCCcCccchh
Confidence 4 456668899999987777
No 318
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.01 E-value=3.5e-10 Score=116.13 Aligned_cols=88 Identities=18% Similarity=0.308 Sum_probs=76.2
Q ss_pred CCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCC--cCCCccceeccc
Q 012219 5 KLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPE--SVRKVPHLYVYG 82 (468)
Q Consensus 5 ~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~--~~~~l~~l~~~~ 82 (468)
.|+.|+|++|+|+ .+|. |++|++|+.|+|++|+|+ .+|..|++|++|+.|+|++|+|++ +|. .+.+|..|++++
T Consensus 442 ~L~~L~Ls~n~l~-~lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp~l~~l~~L~~L~Ls~ 517 (567)
T 1dce_A 442 DVRVLHLAHKDLT-VLCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VDGVANLPRLQELLLCN 517 (567)
T ss_dssp TCSEEECTTSCCS-SCCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CGGGTTCSSCCEEECCS
T ss_pred CceEEEecCCCCC-CCcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-CcccCCCCCCcEEECCC
Confidence 5899999999999 5887 999999999999999999 999999999999999999999995 882 334566788999
Q ss_pred ccccccC-CCCCCCC
Q 012219 83 KNFDVEI-PNTSENS 96 (468)
Q Consensus 83 n~l~~~~-p~~~~~~ 96 (468)
|.+.+.. |......
T Consensus 518 N~l~~~~~p~~l~~l 532 (567)
T 1dce_A 518 NRLQQSAAIQPLVSC 532 (567)
T ss_dssp SCCCSSSTTGGGGGC
T ss_pred CCCCCCCCcHHHhcC
Confidence 9998875 6655443
No 319
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.01 E-value=4.2e-10 Score=112.70 Aligned_cols=91 Identities=14% Similarity=0.128 Sum_probs=69.0
Q ss_pred CCCCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCCcC---CCccce
Q 012219 2 NCSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPESV---RKVPHL 78 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~---~~l~~l 78 (468)
++++|+.|+|++|+|+ .+| .+..+++|+.|+|++|+|++..|..|.++++|+.|+|++|++++..|..+ .+|..|
T Consensus 194 ~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 271 (452)
T 3zyi_A 194 GLFNLKYLNLGMCNIK-DMP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVEL 271 (452)
T ss_dssp TCTTCCEEECTTSCCS-SCC-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CCCCCCEEECCCCccc-ccc-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEE
Confidence 5678888888888888 555 57788888888888888887778888888888888888888886666544 455667
Q ss_pred ecccccccccCCCCCC
Q 012219 79 YVYGKNFDVEIPNTSE 94 (468)
Q Consensus 79 ~~~~n~l~~~~p~~~~ 94 (468)
++++|.+....+..+.
T Consensus 272 ~L~~N~l~~~~~~~~~ 287 (452)
T 3zyi_A 272 NLAHNNLSSLPHDLFT 287 (452)
T ss_dssp ECCSSCCSCCCTTSST
T ss_pred ECCCCcCCccChHHhc
Confidence 7888887765554443
No 320
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.01 E-value=1.9e-10 Score=109.34 Aligned_cols=86 Identities=23% Similarity=0.228 Sum_probs=74.1
Q ss_pred CCCCCcEEEccCCcccccCCccc--ccCCCCCEeeccCccccccccccccCC-----CCCceecccCcccccccCCcC--
Q 012219 2 NCSKLRVLELGNNLLSGSIPSEI--NKLQELNYLNLSHNSINGKILSQLGEI-----PRIDTVDLSMNNLSGSIPESV-- 72 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g~~p~~~--~~l~~L~~L~l~~N~l~g~~p~~~~~l-----~~L~~l~l~~N~l~g~~p~~~-- 72 (468)
++++|+.|+|++|+++|.+|..+ +.+++|++|+|++|++++. |..++.+ ++|+.|+|++|++++..|..+
T Consensus 93 ~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~ 171 (312)
T 1wwl_A 93 GISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRV 171 (312)
T ss_dssp TTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCC
T ss_pred CcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhcc
Confidence 58899999999999999999987 8999999999999999977 8888877 999999999999997666655
Q ss_pred -CCccceeccccccccc
Q 012219 73 -RKVPHLYVYGKNFDVE 88 (468)
Q Consensus 73 -~~l~~l~~~~n~l~~~ 88 (468)
.+|+.|++++|.+.+.
T Consensus 172 l~~L~~L~Ls~N~l~~~ 188 (312)
T 1wwl_A 172 FPALSTLDLSDNPELGE 188 (312)
T ss_dssp CSSCCEEECCSCTTCHH
T ss_pred CCCCCEEECCCCCcCcc
Confidence 4566688999987654
No 321
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.01 E-value=4.1e-10 Score=112.33 Aligned_cols=91 Identities=16% Similarity=0.191 Sum_probs=67.0
Q ss_pred CCCCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCCcC---CCccce
Q 012219 2 NCSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPESV---RKVPHL 78 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~---~~l~~l 78 (468)
++++|+.|+|++|+|+ .+| .+..+++|+.|+|++|+|++..|..|.++++|+.|+|++|++++..|..+ .+|+.|
T Consensus 183 ~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 260 (440)
T 3zyj_A 183 GLSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEI 260 (440)
T ss_dssp TCSSCCEEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEE
T ss_pred cccccCeecCCCCcCc-ccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEE
Confidence 4677888888888887 666 47778888888888888887777778888888888888888886555544 445567
Q ss_pred ecccccccccCCCCCC
Q 012219 79 YVYGKNFDVEIPNTSE 94 (468)
Q Consensus 79 ~~~~n~l~~~~p~~~~ 94 (468)
++++|++....+..+.
T Consensus 261 ~L~~N~l~~~~~~~~~ 276 (440)
T 3zyj_A 261 NLAHNNLTLLPHDLFT 276 (440)
T ss_dssp ECTTSCCCCCCTTTTS
T ss_pred ECCCCCCCccChhHhc
Confidence 7888877765554433
No 322
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.00 E-value=1.7e-10 Score=124.68 Aligned_cols=87 Identities=25% Similarity=0.314 Sum_probs=67.1
Q ss_pred CCCCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCCcCCCccceecc
Q 012219 2 NCSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPESVRKVPHLYVY 81 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~~ 81 (468)
++++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..|..+. ++|+.|+|++|+|+|..|..+.++..|++.
T Consensus 478 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~~~L~~l~l~ 555 (844)
T 3j0a_A 478 GLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDVFVSLSVLDIT 555 (844)
T ss_dssp CBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCCCSSCCEEEEE
T ss_pred CcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhHhCCcCEEEec
Confidence 457777888888888866667778888888888888888865555554 788888888888888888888888888888
Q ss_pred cccccccCC
Q 012219 82 GKNFDVEIP 90 (468)
Q Consensus 82 ~n~l~~~~p 90 (468)
+|++.+.++
T Consensus 556 ~Np~~C~c~ 564 (844)
T 3j0a_A 556 HNKFICECE 564 (844)
T ss_dssp EECCCCSSS
T ss_pred CCCcccccc
Confidence 888877554
No 323
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=98.99 E-value=6.8e-10 Score=107.05 Aligned_cols=86 Identities=13% Similarity=0.158 Sum_probs=74.0
Q ss_pred cEEEccCC-cccccCCcccccCCCCCEeeccC-ccccccccccccCCCCCceecccCcccccccCCcC---CCccceecc
Q 012219 7 RVLELGNN-LLSGSIPSEINKLQELNYLNLSH-NSINGKILSQLGEIPRIDTVDLSMNNLSGSIPESV---RKVPHLYVY 81 (468)
Q Consensus 7 ~~l~l~~N-~l~g~~p~~~~~l~~L~~L~l~~-N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~---~~l~~l~~~ 81 (468)
..+++++| +|+ .||. |+.+++|+.|+|++ |+|++..|..|++|++|+.|+|++|+|+|..|..| .+|..|+++
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 45799998 999 7999 99999999999996 99998878899999999999999999998777654 566678999
Q ss_pred cccccccCCCCCC
Q 012219 82 GKNFDVEIPNTSE 94 (468)
Q Consensus 82 ~n~l~~~~p~~~~ 94 (468)
+|.+.+..+..+.
T Consensus 89 ~N~l~~~~~~~~~ 101 (347)
T 2ifg_A 89 FNALESLSWKTVQ 101 (347)
T ss_dssp SSCCSCCCSTTTC
T ss_pred CCccceeCHHHcc
Confidence 9999876555443
No 324
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=98.99 E-value=4.9e-10 Score=115.49 Aligned_cols=95 Identities=16% Similarity=0.182 Sum_probs=79.3
Q ss_pred CCCCCcEEEccCCcccccCCcccccCCCCCEeeccCcccc-ccccccccCCCCCceecccCcccccccCCcCC---Cccc
Q 012219 2 NCSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSIN-GKILSQLGEIPRIDTVDLSMNNLSGSIPESVR---KVPH 77 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~-g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~~---~l~~ 77 (468)
++++|+.|+|++|++++.+|..|.++++|+.|+|++|+++ +.+|..+..+++|+.|+|++|++++..|..+. +|+.
T Consensus 419 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 498 (570)
T 2z63_A 419 SLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQV 498 (570)
T ss_dssp TCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred cCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCE
Confidence 5788999999999999888888999999999999999998 67898899999999999999999977787654 4566
Q ss_pred eecccccccccCCCCCCCC
Q 012219 78 LYVYGKNFDVEIPNTSENS 96 (468)
Q Consensus 78 l~~~~n~l~~~~p~~~~~~ 96 (468)
|++++|.+.+..|..+...
T Consensus 499 L~l~~n~l~~~~~~~~~~l 517 (570)
T 2z63_A 499 LNMASNQLKSVPDGIFDRL 517 (570)
T ss_dssp EECCSSCCSCCCTTTTTTC
T ss_pred EeCCCCcCCCCCHHHhhcc
Confidence 7888998887766554433
No 325
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=98.99 E-value=7e-10 Score=103.30 Aligned_cols=89 Identities=17% Similarity=0.091 Sum_probs=66.6
Q ss_pred CCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCCcC---CCccceecc
Q 012219 5 KLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPESV---RKVPHLYVY 81 (468)
Q Consensus 5 ~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~---~~l~~l~~~ 81 (468)
+|+.|+|++|++++..+..|+++++|++|+|++|++++..|..|.++++|+.|+|++|++++..|..+ .+|+.|++.
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 108 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECC
Confidence 58888888888886555678888888888888888886666678888888888888888886555544 455567778
Q ss_pred cccccccCCCCC
Q 012219 82 GKNFDVEIPNTS 93 (468)
Q Consensus 82 ~n~l~~~~p~~~ 93 (468)
+|.+....+...
T Consensus 109 ~n~l~~~~~~~~ 120 (276)
T 2z62_A 109 ETNLASLENFPI 120 (276)
T ss_dssp TSCCCCSTTCCC
T ss_pred CCCccccCchhc
Confidence 887766544333
No 326
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=98.99 E-value=7e-10 Score=115.12 Aligned_cols=94 Identities=17% Similarity=0.220 Sum_probs=75.1
Q ss_pred CCCCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCCc----CCCccc
Q 012219 2 NCSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPES----VRKVPH 77 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~----~~~l~~ 77 (468)
++++|+.|+|++|+|++..|..|+++++|++|+|++|.|++..|..|++|++|+.|+|++|+++ .+|.. +.+|..
T Consensus 73 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~ 151 (597)
T 3oja_B 73 SFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTT 151 (597)
T ss_dssp HCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCE
T ss_pred cCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCC-CCCHHHhccCCCCCE
Confidence 4678899999999998777778999999999999999999877777889999999999999998 45542 355667
Q ss_pred eecccccccccCCCCCCCC
Q 012219 78 LYVYGKNFDVEIPNTSENS 96 (468)
Q Consensus 78 l~~~~n~l~~~~p~~~~~~ 96 (468)
|++++|.+.+..|..+...
T Consensus 152 L~Ls~N~l~~~~~~~~~~l 170 (597)
T 3oja_B 152 LSMSNNNLERIEDDTFQAT 170 (597)
T ss_dssp EECCSSCCCBCCTTTTTTC
T ss_pred EEeeCCcCCCCChhhhhcC
Confidence 8888888887766555443
No 327
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=98.98 E-value=6.8e-10 Score=115.42 Aligned_cols=86 Identities=16% Similarity=0.138 Sum_probs=49.8
Q ss_pred CCCCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCCcC---CCccce
Q 012219 2 NCSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPESV---RKVPHL 78 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~---~~l~~l 78 (468)
++++|++|+|++|++++..|..|+++++|++|+|++|++++..|..|++|++|++|+|++|++++..|..+ .+|+.|
T Consensus 54 ~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 133 (606)
T 3vq2_A 54 NFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKL 133 (606)
T ss_dssp TCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEE
T ss_pred CCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEE
Confidence 45566666666666665555566666666666666666665556666666666666666666663333333 334445
Q ss_pred ecccccccc
Q 012219 79 YVYGKNFDV 87 (468)
Q Consensus 79 ~~~~n~l~~ 87 (468)
++++|.+..
T Consensus 134 ~L~~n~l~~ 142 (606)
T 3vq2_A 134 NVAHNFIHS 142 (606)
T ss_dssp ECCSSCCCC
T ss_pred eCCCCcccc
Confidence 566665543
No 328
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=98.98 E-value=8.9e-10 Score=111.08 Aligned_cols=87 Identities=20% Similarity=0.288 Sum_probs=50.9
Q ss_pred CCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCC-c---CCCccceec
Q 012219 5 KLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPE-S---VRKVPHLYV 80 (468)
Q Consensus 5 ~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~-~---~~~l~~l~~ 80 (468)
+|+.|+|++|+|++..|..|.++++|++|+|++|++++..|..|.+|++|+.|+|++|+++ .+|. . +.+|+.|++
T Consensus 33 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L 111 (477)
T 2id5_A 33 ETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLK-LIPLGVFTGLSNLTKLDI 111 (477)
T ss_dssp TCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCC-SCCTTSSTTCTTCCEEEC
T ss_pred CCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCC-ccCcccccCCCCCCEEEC
Confidence 4666666666666555556666666666666666666555666666666666666666666 3432 2 234445556
Q ss_pred ccccccccCCCC
Q 012219 81 YGKNFDVEIPNT 92 (468)
Q Consensus 81 ~~n~l~~~~p~~ 92 (468)
++|.+....|..
T Consensus 112 s~n~i~~~~~~~ 123 (477)
T 2id5_A 112 SENKIVILLDYM 123 (477)
T ss_dssp TTSCCCEECTTT
T ss_pred CCCccccCChhH
Confidence 666555544433
No 329
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=98.97 E-value=2.4e-10 Score=108.54 Aligned_cols=89 Identities=16% Similarity=0.139 Sum_probs=58.4
Q ss_pred CcEEEccCCcc-cccCCcccc-------cCCCCCEeeccCccccccccccc--cCCCCCceecccCcccccccCCcC---
Q 012219 6 LRVLELGNNLL-SGSIPSEIN-------KLQELNYLNLSHNSINGKILSQL--GEIPRIDTVDLSMNNLSGSIPESV--- 72 (468)
Q Consensus 6 l~~l~l~~N~l-~g~~p~~~~-------~l~~L~~L~l~~N~l~g~~p~~~--~~l~~L~~l~l~~N~l~g~~p~~~--- 72 (468)
|+.|+|++|++ .+.+|..+. ++++|++|+|++|+++|.+|..+ ..+++|+.|+|++|++++. |..+
T Consensus 65 L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l 143 (312)
T 1wwl_A 65 IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAEL 143 (312)
T ss_dssp HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHH
T ss_pred HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHH
Confidence 56667777777 455666655 67777777777777777777765 6777777777777777754 5422
Q ss_pred -----CCccceecccccccccCCCCCCC
Q 012219 73 -----RKVPHLYVYGKNFDVEIPNTSEN 95 (468)
Q Consensus 73 -----~~l~~l~~~~n~l~~~~p~~~~~ 95 (468)
.+++.|++++|.+....|.....
T Consensus 144 ~~~~~~~L~~L~L~~N~l~~~~~~~~~~ 171 (312)
T 1wwl_A 144 QQWLKPGLKVLSIAQAHSLNFSCEQVRV 171 (312)
T ss_dssp HTTCCTTCCEEEEESCSCCCCCTTTCCC
T ss_pred HHhhcCCCcEEEeeCCCCccchHHHhcc
Confidence 45666677777776655554443
No 330
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=98.97 E-value=3e-10 Score=121.66 Aligned_cols=87 Identities=24% Similarity=0.316 Sum_probs=77.8
Q ss_pred CCCCCcEEEccCCcccccCCcccccCCCCCEeeccCcc-ccc-cccccccCCC-------CCceecccCcccccccCC--
Q 012219 2 NCSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNS-ING-KILSQLGEIP-------RIDTVDLSMNNLSGSIPE-- 70 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~-l~g-~~p~~~~~l~-------~L~~l~l~~N~l~g~~p~-- 70 (468)
+|++|+.|+|++|++.|.+|..|++|++|+.|+|++|+ |+| .+|..+++|+ +|+.|+|++|+++ .+|.
T Consensus 489 ~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~ 567 (876)
T 4ecn_A 489 NLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASA 567 (876)
T ss_dssp GCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHH
T ss_pred cCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChh
Confidence 68999999999999999999999999999999999998 999 8998777665 9999999999999 8998
Q ss_pred cC---CCccceecccccccccCC
Q 012219 71 SV---RKVPHLYVYGKNFDVEIP 90 (468)
Q Consensus 71 ~~---~~l~~l~~~~n~l~~~~p 90 (468)
.+ .+|..|++++|.+. .+|
T Consensus 568 ~l~~L~~L~~L~Ls~N~l~-~lp 589 (876)
T 4ecn_A 568 SLQKMVKLGLLDCVHNKVR-HLE 589 (876)
T ss_dssp HHTTCTTCCEEECTTSCCC-BCC
T ss_pred hhhcCCCCCEEECCCCCcc-cch
Confidence 55 45666889999988 666
No 331
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=98.97 E-value=6.9e-10 Score=103.33 Aligned_cols=94 Identities=18% Similarity=0.204 Sum_probs=77.5
Q ss_pred CCCCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCCcC---CCccce
Q 012219 2 NCSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPESV---RKVPHL 78 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~---~~l~~l 78 (468)
++++|+.|+|++|++++..+..|+++++|++|+|++|++++..|..|.++++|+.|++++|++++..+..+ .+|+.|
T Consensus 50 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 129 (276)
T 2z62_A 50 SFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKEL 129 (276)
T ss_dssp TCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEE
T ss_pred cccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEE
Confidence 57899999999999996666789999999999999999998878889999999999999999996444344 556678
Q ss_pred eccccccccc-CCCCCCC
Q 012219 79 YVYGKNFDVE-IPNTSEN 95 (468)
Q Consensus 79 ~~~~n~l~~~-~p~~~~~ 95 (468)
++++|.+... +|.....
T Consensus 130 ~l~~n~l~~~~l~~~~~~ 147 (276)
T 2z62_A 130 NVAHNLIQSFKLPEYFSN 147 (276)
T ss_dssp ECCSSCCCCCCCCGGGGG
T ss_pred ECcCCccceecCchhhcc
Confidence 8999988763 4554443
No 332
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=98.97 E-value=6.4e-10 Score=96.16 Aligned_cols=81 Identities=14% Similarity=0.203 Sum_probs=68.1
Q ss_pred CCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCC--cC---CCccce
Q 012219 4 SKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPE--SV---RKVPHL 78 (468)
Q Consensus 4 ~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~--~~---~~l~~l 78 (468)
++|+.|+|++|+|++. +.|+++++|++|+|++|+|++..|..+.++++|+.|+|++|+++ .+|. .+ .++..|
T Consensus 42 ~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L 118 (176)
T 1a9n_A 42 DQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYL 118 (176)
T ss_dssp TCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEE
T ss_pred CCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEE
Confidence 4899999999999954 68999999999999999999544444599999999999999997 6776 44 456678
Q ss_pred ecccccccc
Q 012219 79 YVYGKNFDV 87 (468)
Q Consensus 79 ~~~~n~l~~ 87 (468)
++++|.+..
T Consensus 119 ~l~~N~i~~ 127 (176)
T 1a9n_A 119 CILRNPVTN 127 (176)
T ss_dssp ECCSSGGGG
T ss_pred EecCCCCCC
Confidence 899999864
No 333
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.96 E-value=9.2e-10 Score=104.09 Aligned_cols=183 Identities=19% Similarity=0.168 Sum_probs=119.5
Q ss_pred cceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhcc-CCc--eeeEEEEEeeCC---EEEEEE
Q 012219 175 KYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIR-HRN--IVKLYGFCLHRK---CMFLIY 248 (468)
Q Consensus 175 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~n--iv~l~~~~~~~~---~~~lv~ 248 (468)
.+.++.|....||+.. ..+++|+.... .....+.+|.++++.+. +.. +.+++.+..... ..++||
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~-----~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm 95 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS-----RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGF 95 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH-----HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEE
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc-----chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEE
Confidence 3568999999999864 45888886543 12356789999998883 322 345555544333 347899
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhc-------------------------------------
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHD------------------------------------- 291 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~------------------------------------- 291 (468)
|+++|.++.+.... .++..++..++.+++..++.||..
T Consensus 96 ~~i~G~~l~~~~~~-----~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (304)
T 3sg8_A 96 TKIKGVPLTPLLLN-----NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQM 170 (304)
T ss_dssp ECCCCEECCHHHHH-----TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHH
T ss_pred cccCCeECCccccc-----cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccH
Confidence 99999888653321 256677778888888888888851
Q ss_pred ------------------CCCCeEecCCCCCceeeCC--CCCeEEeeccccccccCCCCCceeccccccc---ccccccc
Q 012219 292 ------------------CTPPIVHRDISSNNVLLNS--ELEAFVADFGVARLLNFDSSNRTLLAGTYGY---IAPELAY 348 (468)
Q Consensus 292 ------------------~~~~ivH~dlk~~NIll~~--~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y---~aPE~~~ 348 (468)
....++|+|++|.||++++ +..+.|.||+.+........ ......+ ..|+...
T Consensus 171 ~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~D----l~~~~~~~~~~~~~~~~ 246 (304)
T 3sg8_A 171 KKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDND----FISLMEDDEEYGMEFVS 246 (304)
T ss_dssp HHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHH----HHTTCCTTTSCCHHHHH
T ss_pred HHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHH----HHHHHhhccccCHHHHH
Confidence 1245899999999999998 45678999998865421100 0000001 1222111
Q ss_pred C-----C---------CCCccchhhHHHHHHHHHHhCCCCC
Q 012219 349 T-----M---------VVTEKCDVYSFGVVALEVLMGKHPG 375 (468)
Q Consensus 349 ~-----~---------~~~~~~Dv~s~Gvil~el~tg~~p~ 375 (468)
. + ......+.|++|.++|.+.+|+.+|
T Consensus 247 ~~l~~Y~~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 247 KILNHYKHKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp HHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 0 0 0112358999999999999999875
No 334
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=98.95 E-value=1.1e-09 Score=105.83 Aligned_cols=84 Identities=23% Similarity=0.358 Sum_probs=62.4
Q ss_pred CCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCC----cCCCcccee
Q 012219 4 SKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPE----SVRKVPHLY 79 (468)
Q Consensus 4 ~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~----~~~~l~~l~ 79 (468)
++|+.|+|++|++++..+..|+++++|++|+|++|++++..|..|+++++|+.|+|++|+++ .+|. .+.+|+.|+
T Consensus 52 ~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~ 130 (353)
T 2z80_A 52 EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLS-NLSSSWFKPLSSLTFLN 130 (353)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCS-SCCHHHHTTCTTCSEEE
T ss_pred ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCC-cCCHhHhCCCccCCEEE
Confidence 46788888888888544457888888888888888888766777888888888888888888 4553 345666777
Q ss_pred ccccccccc
Q 012219 80 VYGKNFDVE 88 (468)
Q Consensus 80 ~~~n~l~~~ 88 (468)
+++|.+...
T Consensus 131 L~~n~l~~l 139 (353)
T 2z80_A 131 LLGNPYKTL 139 (353)
T ss_dssp CTTCCCSSS
T ss_pred CCCCCCccc
Confidence 888777643
No 335
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=98.95 E-value=6.9e-10 Score=113.13 Aligned_cols=91 Identities=22% Similarity=0.274 Sum_probs=78.6
Q ss_pred CCCCCcEEEccCCcccccCCcccccCCCCCEeeccCccccc--cccccccCCCCCceecccCcccccccCCc----CCCc
Q 012219 2 NCSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSING--KILSQLGEIPRIDTVDLSMNNLSGSIPES----VRKV 75 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g--~~p~~~~~l~~L~~l~l~~N~l~g~~p~~----~~~l 75 (468)
++++|+.|+|++|++++.+|..++++++|++|+|++|++++ .+|..++++++|+.|+|++|++++.+|.. +.++
T Consensus 322 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L 401 (520)
T 2z7x_B 322 KISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSL 401 (520)
T ss_dssp SCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTC
T ss_pred hCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccC
Confidence 57889999999999998899999999999999999999997 67788999999999999999999767753 4567
Q ss_pred cceecccccccccCCCC
Q 012219 76 PHLYVYGKNFDVEIPNT 92 (468)
Q Consensus 76 ~~l~~~~n~l~~~~p~~ 92 (468)
+.|++++|.+.+..|..
T Consensus 402 ~~L~Ls~N~l~~~~~~~ 418 (520)
T 2z7x_B 402 LSLNMSSNILTDTIFRC 418 (520)
T ss_dssp CEEECCSSCCCGGGGGS
T ss_pred CEEECcCCCCCcchhhh
Confidence 77889999987766544
No 336
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=98.95 E-value=1.2e-09 Score=109.44 Aligned_cols=91 Identities=20% Similarity=0.219 Sum_probs=75.1
Q ss_pred CCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCCc---CCCccceec
Q 012219 4 SKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPES---VRKVPHLYV 80 (468)
Q Consensus 4 ~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~---~~~l~~l~~ 80 (468)
++|+.|+|++|+|++..|..|+++++|+.|+|++|+|++..|..|.++++|+.|+|++|++++..|.. +.+|+.|++
T Consensus 75 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 154 (452)
T 3zyi_A 75 SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWL 154 (452)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEEC
T ss_pred CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEEC
Confidence 47899999999999888889999999999999999999888888999999999999999999443333 456677889
Q ss_pred ccccccccCCCCCC
Q 012219 81 YGKNFDVEIPNTSE 94 (468)
Q Consensus 81 ~~n~l~~~~p~~~~ 94 (468)
++|.+....+..+.
T Consensus 155 ~~N~l~~~~~~~~~ 168 (452)
T 3zyi_A 155 RNNPIESIPSYAFN 168 (452)
T ss_dssp CSCCCCEECTTTTT
T ss_pred CCCCcceeCHhHHh
Confidence 99988765544443
No 337
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=98.95 E-value=5.4e-10 Score=112.87 Aligned_cols=88 Identities=22% Similarity=0.191 Sum_probs=65.3
Q ss_pred CCCCCcEEEccCCcccccCCcccc-cCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCCcC---CCccc
Q 012219 2 NCSKLRVLELGNNLLSGSIPSEIN-KLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPESV---RKVPH 77 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g~~p~~~~-~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~---~~l~~ 77 (468)
++++|+.|+|++|+|++.+|..+. ++++|+.|+|++|.|++. | .+..+++|+.|+|++|+|++ +|..+ .+|..
T Consensus 142 ~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~ 218 (487)
T 3oja_A 142 CRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTW 218 (487)
T ss_dssp GGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSE
T ss_pred CCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc-c-ccccCCCCCEEECCCCCCCC-CCHhHcCCCCccE
Confidence 467888888888888887887776 788888888888888855 3 34468888888888888885 44433 45666
Q ss_pred eecccccccccCCCCC
Q 012219 78 LYVYGKNFDVEIPNTS 93 (468)
Q Consensus 78 l~~~~n~l~~~~p~~~ 93 (468)
|++++|.+.+ +|...
T Consensus 219 L~Ls~N~l~~-lp~~l 233 (487)
T 3oja_A 219 ISLRNNKLVL-IEKAL 233 (487)
T ss_dssp EECTTSCCCE-ECTTC
T ss_pred EEecCCcCcc-cchhh
Confidence 7888888875 44433
No 338
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=98.95 E-value=1.4e-09 Score=106.71 Aligned_cols=92 Identities=17% Similarity=0.220 Sum_probs=66.5
Q ss_pred CCCCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCCc----CCCccc
Q 012219 2 NCSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPES----VRKVPH 77 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~----~~~l~~ 77 (468)
++++|+.|+|++|++++..|..|+++++|++|+|++|++++..|..|+++++|+.|+|++|+++ .+|.. +.+|+.
T Consensus 67 ~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~ 145 (390)
T 3o6n_A 67 SFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTT 145 (390)
T ss_dssp HCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCE
T ss_pred ccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccC-cCCHHHhcCCCCCcE
Confidence 3677888888888887655667888888888888888888766777788888888888888887 56543 345666
Q ss_pred eecccccccccCCCCCC
Q 012219 78 LYVYGKNFDVEIPNTSE 94 (468)
Q Consensus 78 l~~~~n~l~~~~p~~~~ 94 (468)
|++++|.+....|....
T Consensus 146 L~L~~n~l~~~~~~~~~ 162 (390)
T 3o6n_A 146 LSMSNNNLERIEDDTFQ 162 (390)
T ss_dssp EECCSSCCCBCCTTTTS
T ss_pred EECCCCccCccChhhcc
Confidence 77777777665554443
No 339
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=98.95 E-value=1.3e-09 Score=112.34 Aligned_cols=95 Identities=15% Similarity=0.234 Sum_probs=74.9
Q ss_pred CCCCCcEEEccCCcccccCC-cccccCCCCCEeeccCccccccccccccCCCCCceecccCcccc-cccCCcCC---Ccc
Q 012219 2 NCSKLRVLELGNNLLSGSIP-SEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLS-GSIPESVR---KVP 76 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g~~p-~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~-g~~p~~~~---~l~ 76 (468)
++++|+.|+|++|.+++..| ..+.++++|++|+|++|++++.+|..+.++++|+.|+|++|+++ +.+|..+. +|+
T Consensus 394 ~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~ 473 (570)
T 2z63_A 394 GLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLT 473 (570)
T ss_dssp TCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCC
T ss_pred ccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCC
Confidence 57788888888888887666 46888888888888888888888888888888888888888887 57887554 455
Q ss_pred ceecccccccccCCCCCCCC
Q 012219 77 HLYVYGKNFDVEIPNTSENS 96 (468)
Q Consensus 77 ~l~~~~n~l~~~~p~~~~~~ 96 (468)
.|++++|.+.+..|..+...
T Consensus 474 ~L~l~~n~l~~~~~~~~~~l 493 (570)
T 2z63_A 474 FLDLSQCQLEQLSPTAFNSL 493 (570)
T ss_dssp EEECTTSCCCEECTTTTTTC
T ss_pred EEECCCCccccCChhhhhcc
Confidence 67788888887766655443
No 340
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=98.93 E-value=1.8e-09 Score=103.37 Aligned_cols=88 Identities=24% Similarity=0.334 Sum_probs=56.7
Q ss_pred CCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCCcCC---Cccceec
Q 012219 4 SKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPESVR---KVPHLYV 80 (468)
Q Consensus 4 ~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~~---~l~~l~~ 80 (468)
++|+.|+|++|++++..|..|+++++|+.|+|++|++++..|..+.++++|+.|+|++|+++ .+|..+. +++.|++
T Consensus 192 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l 270 (330)
T 1xku_A 192 PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYL 270 (330)
T ss_dssp TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEEC
T ss_pred ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEEC
Confidence 45666666666666655666777777777777777777655556777777777777777777 6666443 3445666
Q ss_pred ccccccccCCCC
Q 012219 81 YGKNFDVEIPNT 92 (468)
Q Consensus 81 ~~n~l~~~~p~~ 92 (468)
++|+++...+..
T Consensus 271 ~~N~i~~~~~~~ 282 (330)
T 1xku_A 271 HNNNISAIGSND 282 (330)
T ss_dssp CSSCCCCCCTTS
T ss_pred CCCcCCccChhh
Confidence 666666544433
No 341
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=98.93 E-value=8.6e-10 Score=112.43 Aligned_cols=91 Identities=29% Similarity=0.300 Sum_probs=75.9
Q ss_pred CCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCC-cCCCccceeccc
Q 012219 4 SKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPE-SVRKVPHLYVYG 82 (468)
Q Consensus 4 ~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~-~~~~l~~l~~~~ 82 (468)
++|+.|+|++|++++..|..|+++++|++|+|++|++++..|..|++|++|++|+|++|+++ .+|. .+.+|+.|++++
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~l~~L~~L~L~~ 99 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCHPTVNLKHLDLSF 99 (520)
T ss_dssp TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECCCCCCCSEEECCS
T ss_pred ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCccccCCccEEeccC
Confidence 57899999999999766678999999999999999999888889999999999999999999 6776 566778888999
Q ss_pred ccccc-cCCCCCCC
Q 012219 83 KNFDV-EIPNTSEN 95 (468)
Q Consensus 83 n~l~~-~~p~~~~~ 95 (468)
|.+.+ ..|.....
T Consensus 100 N~l~~~~~p~~~~~ 113 (520)
T 2z7x_B 100 NAFDALPICKEFGN 113 (520)
T ss_dssp SCCSSCCCCGGGGG
T ss_pred Cccccccchhhhcc
Confidence 98876 45555443
No 342
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=98.93 E-value=1.6e-09 Score=112.42 Aligned_cols=88 Identities=17% Similarity=0.227 Sum_probs=74.7
Q ss_pred CCCCCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCCcCC---Cccc
Q 012219 1 MNCSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPESVR---KVPH 77 (468)
Q Consensus 1 ~~l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~~---~l~~ 77 (468)
+++++|+.|+|++|.|++..|..|+++++|++|+|++|+|++..|..|+++++|+.|+|++|++++..|..+. +|..
T Consensus 96 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 175 (597)
T 3oja_B 96 AYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQN 175 (597)
T ss_dssp TTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCE
T ss_pred cCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcE
Confidence 3688999999999999987777899999999999999999955445579999999999999999987776554 5666
Q ss_pred eeccccccccc
Q 012219 78 LYVYGKNFDVE 88 (468)
Q Consensus 78 l~~~~n~l~~~ 88 (468)
|++++|.+.+.
T Consensus 176 L~L~~N~l~~~ 186 (597)
T 3oja_B 176 LQLSSNRLTHV 186 (597)
T ss_dssp EECTTSCCSBC
T ss_pred EECcCCCCCCc
Confidence 88999988764
No 343
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=98.93 E-value=7.1e-10 Score=115.28 Aligned_cols=91 Identities=21% Similarity=0.282 Sum_probs=72.7
Q ss_pred CCCCCcEEEccCCccccc---CCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCCcCCCcc--
Q 012219 2 NCSKLRVLELGNNLLSGS---IPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPESVRKVP-- 76 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g~---~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~~~l~-- 76 (468)
++++|+.|+|++|.+++. .+..++.+++|+.|+|++|++++..|..|.++++|+.|+|++|++++..|..+.+++
T Consensus 447 ~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L 526 (606)
T 3t6q_A 447 GLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI 526 (606)
T ss_dssp TCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC
T ss_pred CCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc
Confidence 578899999999998862 235688889999999999999988888889999999999999999888887665555
Q ss_pred ceecccccccccCCCC
Q 012219 77 HLYVYGKNFDVEIPNT 92 (468)
Q Consensus 77 ~l~~~~n~l~~~~p~~ 92 (468)
.|++++|.+.+..|..
T Consensus 527 ~L~L~~N~l~~~~~~~ 542 (606)
T 3t6q_A 527 YLNLASNHISIILPSL 542 (606)
T ss_dssp EEECCSSCCCCCCGGG
T ss_pred EEECcCCcccccCHhh
Confidence 5667888887665543
No 344
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=98.92 E-value=1.2e-09 Score=112.23 Aligned_cols=61 Identities=23% Similarity=0.243 Sum_probs=29.1
Q ss_pred CCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccc
Q 012219 5 KLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLS 65 (468)
Q Consensus 5 ~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~ 65 (468)
+|+.|+|++|++++..|..|+++++|++|+|++|++++..|..|+++++|++|+|++|+++
T Consensus 27 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~ 87 (549)
T 2z81_A 27 AMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLS 87 (549)
T ss_dssp TCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCC
T ss_pred CccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccC
Confidence 3444444444444444444444444444444444444444444444444444444444444
No 345
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=98.92 E-value=1.4e-09 Score=112.05 Aligned_cols=91 Identities=18% Similarity=0.270 Sum_probs=76.8
Q ss_pred CCCCCcEEEccCCcccccCCcccccCCCCCEeeccCccccc--cccccccCCCCCceecccCcccccccCCc----CCCc
Q 012219 2 NCSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSING--KILSQLGEIPRIDTVDLSMNNLSGSIPES----VRKV 75 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g--~~p~~~~~l~~L~~l~l~~N~l~g~~p~~----~~~l 75 (468)
++++|+.|+|++|++++.+|..++++++|++|+|++|++++ .+|..+.++++|+.|+|++|++++.+|.. +.++
T Consensus 351 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L 430 (562)
T 3a79_B 351 SPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESI 430 (562)
T ss_dssp SCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTC
T ss_pred CCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccC
Confidence 56889999999999998899999999999999999999996 45677899999999999999999767763 4567
Q ss_pred cceecccccccccCCCC
Q 012219 76 PHLYVYGKNFDVEIPNT 92 (468)
Q Consensus 76 ~~l~~~~n~l~~~~p~~ 92 (468)
+.|++++|.+.+..|..
T Consensus 431 ~~L~l~~n~l~~~~~~~ 447 (562)
T 3a79_B 431 LVLNLSSNMLTGSVFRC 447 (562)
T ss_dssp CEEECCSSCCCGGGGSS
T ss_pred CEEECCCCCCCcchhhh
Confidence 77889998887766544
No 346
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=98.92 E-value=2.3e-09 Score=106.89 Aligned_cols=86 Identities=29% Similarity=0.404 Sum_probs=39.7
Q ss_pred CCCCcEEEccCCcccccCCc-ccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCCcCC---Cccce
Q 012219 3 CSKLRVLELGNNLLSGSIPS-EINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPESVR---KVPHL 78 (468)
Q Consensus 3 l~~l~~l~l~~N~l~g~~p~-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~~---~l~~l 78 (468)
+++|+.|+|++|+..+.+|. .|.++++|++|+|++|+|+ .+| .+..+++|+.|+|++|++++..|..+. +|+.|
T Consensus 159 l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 236 (440)
T 3zyj_A 159 IPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKL 236 (440)
T ss_dssp CTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-ccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEE
Confidence 44555555555332223333 3455555555555555555 333 345555555555555555543343332 23334
Q ss_pred ecccccccccCC
Q 012219 79 YVYGKNFDVEIP 90 (468)
Q Consensus 79 ~~~~n~l~~~~p 90 (468)
++++|.+....+
T Consensus 237 ~L~~n~l~~~~~ 248 (440)
T 3zyj_A 237 WMIQSQIQVIER 248 (440)
T ss_dssp ECTTCCCCEECT
T ss_pred ECCCCceeEECh
Confidence 455555444433
No 347
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=98.92 E-value=1.1e-09 Score=99.65 Aligned_cols=83 Identities=11% Similarity=0.205 Sum_probs=56.4
Q ss_pred CCcEEEccCCcccccCCcccccCCCCCEeeccCcc-ccccccccccCCCCCceecccC-cccccccCCc---CCCcccee
Q 012219 5 KLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNS-INGKILSQLGEIPRIDTVDLSM-NNLSGSIPES---VRKVPHLY 79 (468)
Q Consensus 5 ~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~-l~g~~p~~~~~l~~L~~l~l~~-N~l~g~~p~~---~~~l~~l~ 79 (468)
+|+.|+|++|++++..+..|+++++|++|+|++|+ +++..+..|.++++|+.|+|++ |++++..|.. +.+|+.|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 57777777777775445567777777777777776 7644445677777777777777 7777333333 34556667
Q ss_pred cccccccc
Q 012219 80 VYGKNFDV 87 (468)
Q Consensus 80 ~~~n~l~~ 87 (468)
+++|.+..
T Consensus 112 l~~n~l~~ 119 (239)
T 2xwt_C 112 IFNTGLKM 119 (239)
T ss_dssp EEEECCCS
T ss_pred CCCCCCcc
Confidence 77777665
No 348
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=98.91 E-value=1.2e-09 Score=117.99 Aligned_cols=66 Identities=21% Similarity=0.266 Sum_probs=31.3
Q ss_pred CCCCcEEEccCCcccccC-CcccccCCCCCEeeccCccccccccccccCCCCCceecccCccccccc
Q 012219 3 CSKLRVLELGNNLLSGSI-PSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSI 68 (468)
Q Consensus 3 l~~l~~l~l~~N~l~g~~-p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~ 68 (468)
+++|+.|+|++|.+.+.+ |..|++|++|++|+|++|++++..|..|++|++|+.|+|++|++++.+
T Consensus 47 l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~ 113 (844)
T 3j0a_A 47 LEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAV 113 (844)
T ss_dssp CCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCC
T ss_pred cccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCccc
Confidence 444445555544444344 334444444555555544444444444444444444444444444433
No 349
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=98.91 E-value=2.3e-09 Score=111.44 Aligned_cols=63 Identities=14% Similarity=0.075 Sum_probs=30.3
Q ss_pred CCCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccc
Q 012219 3 CSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLS 65 (468)
Q Consensus 3 l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~ 65 (468)
+++|++|+|++|++++..|..|+++++|++|+|++|++++..|..|+++++|++|+|++|+++
T Consensus 56 l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~ 118 (606)
T 3t6q_A 56 LINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGIS 118 (606)
T ss_dssp CTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECTTSCCS
T ss_pred CccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeeccccCcc
Confidence 444444444444444444444444444444444444444444444444444444444444444
No 350
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=98.91 E-value=1e-09 Score=104.05 Aligned_cols=90 Identities=14% Similarity=0.202 Sum_probs=58.2
Q ss_pred CCCCcEEEccCCcccccCCcccccCCCCCEeeccCcccccc--cccc--ccCCCCCceecccCcccccccCC-------c
Q 012219 3 CSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGK--ILSQ--LGEIPRIDTVDLSMNNLSGSIPE-------S 71 (468)
Q Consensus 3 l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~--~p~~--~~~l~~L~~l~l~~N~l~g~~p~-------~ 71 (468)
+++|+.|+|++|++++..|..|+++++|++|+|++|+++|. +|.. ++++++|++|+|++|+++ .+|. .
T Consensus 144 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~ 222 (310)
T 4glp_A 144 KPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAA 222 (310)
T ss_dssp CSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHH
T ss_pred ccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhc
Confidence 56777777777777766666777777777777777776653 3222 356777777777777776 2332 2
Q ss_pred CCCccceecccccccccCCCCC
Q 012219 72 VRKVPHLYVYGKNFDVEIPNTS 93 (468)
Q Consensus 72 ~~~l~~l~~~~n~l~~~~p~~~ 93 (468)
+.+|+.|++++|.+....|...
T Consensus 223 l~~L~~L~Ls~N~l~~~~p~~~ 244 (310)
T 4glp_A 223 GVQPHSLDLSHNSLRATVNPSA 244 (310)
T ss_dssp TCCCSSEECTTSCCCCCCCSCC
T ss_pred CCCCCEEECCCCCCCccchhhH
Confidence 3566677777777776655443
No 351
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=98.90 E-value=2.2e-09 Score=108.17 Aligned_cols=96 Identities=20% Similarity=0.200 Sum_probs=82.0
Q ss_pred CCCCCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCCcC---CCccc
Q 012219 1 MNCSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPESV---RKVPH 77 (468)
Q Consensus 1 ~~l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~---~~l~~ 77 (468)
.++++|+.|+|++|++++..|..|+++++|++|+|++|++++..+..|.++++|+.|+|++|++++..|..+ .+|+.
T Consensus 53 ~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 132 (477)
T 2id5_A 53 ASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKS 132 (477)
T ss_dssp TTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred cCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCE
Confidence 368899999999999998889999999999999999999996555668999999999999999997777655 45667
Q ss_pred eecccccccccCCCCCCCC
Q 012219 78 LYVYGKNFDVEIPNTSENS 96 (468)
Q Consensus 78 l~~~~n~l~~~~p~~~~~~ 96 (468)
|++++|.+....|..+...
T Consensus 133 L~l~~n~l~~~~~~~~~~l 151 (477)
T 2id5_A 133 LEVGDNDLVYISHRAFSGL 151 (477)
T ss_dssp EEECCTTCCEECTTSSTTC
T ss_pred EECCCCccceeChhhccCC
Confidence 8899999887766655543
No 352
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=98.90 E-value=2.7e-09 Score=102.21 Aligned_cols=87 Identities=21% Similarity=0.252 Sum_probs=73.9
Q ss_pred CCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCCcC-CCccceeccc
Q 012219 4 SKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPESV-RKVPHLYVYG 82 (468)
Q Consensus 4 ~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~-~~l~~l~~~~ 82 (468)
++|+.|+|++|++++..|..|+++++|++|+|++|++++..|..|+++++|+.|+|++|+++ .+|..+ .+++.|++++
T Consensus 54 ~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~L~~L~l~~ 132 (332)
T 2ft3_A 54 PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLPSSLVELRIHD 132 (332)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCCTTCCEEECCS
T ss_pred CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCccccccCCEEECCC
Confidence 57899999999999766778999999999999999999888889999999999999999999 677654 5788889999
Q ss_pred ccccccCCC
Q 012219 83 KNFDVEIPN 91 (468)
Q Consensus 83 n~l~~~~p~ 91 (468)
|.+....+.
T Consensus 133 n~i~~~~~~ 141 (332)
T 2ft3_A 133 NRIRKVPKG 141 (332)
T ss_dssp SCCCCCCSG
T ss_pred CccCccCHh
Confidence 888765443
No 353
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=98.90 E-value=1.8e-09 Score=110.87 Aligned_cols=90 Identities=20% Similarity=0.231 Sum_probs=77.8
Q ss_pred CCCCCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCccccc-ccCCcC---CCcc
Q 012219 1 MNCSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSG-SIPESV---RKVP 76 (468)
Q Consensus 1 ~~l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g-~~p~~~---~~l~ 76 (468)
+++++|++|+|++|++++..|+.|+++++|++|+|++|++++..|..|++|++|++|+|++|++++ .+|..+ .+|+
T Consensus 47 ~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~ 126 (549)
T 2z81_A 47 RACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQ 126 (549)
T ss_dssp SSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCC
T ss_pred hcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCcc
Confidence 368899999999999998888899999999999999999998888789999999999999999996 355544 5566
Q ss_pred ceecccccccccCC
Q 012219 77 HLYVYGKNFDVEIP 90 (468)
Q Consensus 77 ~l~~~~n~l~~~~p 90 (468)
.|++++|.+.+.+|
T Consensus 127 ~L~L~~n~~~~~~~ 140 (549)
T 2z81_A 127 TLRIGNVETFSEIR 140 (549)
T ss_dssp EEEEEESSSCCEEC
T ss_pred EEECCCCccccccC
Confidence 78899998655555
No 354
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=98.89 E-value=1.8e-09 Score=111.14 Aligned_cols=83 Identities=29% Similarity=0.339 Sum_probs=70.8
Q ss_pred CCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCC-cCCCccceeccc
Q 012219 4 SKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPE-SVRKVPHLYVYG 82 (468)
Q Consensus 4 ~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~-~~~~l~~l~~~~ 82 (468)
++|+.|+|++|+|++..|..|+++++|++|+|++|++++..|..|++|++|++|+|++|+++ .+|. .+.+|+.|++++
T Consensus 52 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~l~~L~~L~Ls~ 130 (562)
T 3a79_B 52 PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCCPMASLRHLDLSF 130 (562)
T ss_dssp TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSCCCTTCSEEECCS
T ss_pred CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCccccccCCEEECCC
Confidence 57899999999999666678999999999999999999887888999999999999999998 6776 566777888998
Q ss_pred ccccc
Q 012219 83 KNFDV 87 (468)
Q Consensus 83 n~l~~ 87 (468)
|.+..
T Consensus 131 N~l~~ 135 (562)
T 3a79_B 131 NDFDV 135 (562)
T ss_dssp SCCSB
T ss_pred CCccc
Confidence 88876
No 355
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=98.88 E-value=2e-09 Score=103.01 Aligned_cols=90 Identities=22% Similarity=0.262 Sum_probs=71.5
Q ss_pred CCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCCcCC---Cccceec
Q 012219 4 SKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPESVR---KVPHLYV 80 (468)
Q Consensus 4 ~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~~---~l~~l~~ 80 (468)
++|+.|+|++|++++..|..|.++++|+.|+|++|++++..|..+..+++|+.|+|++|+++ .+|..+. +|+.|++
T Consensus 193 ~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l 271 (332)
T 2ft3_A 193 ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYL 271 (332)
T ss_dssp SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEEC
T ss_pred CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEEC
Confidence 47888888888888766678888889999999999998777778888889999999999888 7887554 4556788
Q ss_pred ccccccccCCCCCC
Q 012219 81 YGKNFDVEIPNTSE 94 (468)
Q Consensus 81 ~~n~l~~~~p~~~~ 94 (468)
++|.+....+..+.
T Consensus 272 ~~N~l~~~~~~~~~ 285 (332)
T 2ft3_A 272 HTNNITKVGVNDFC 285 (332)
T ss_dssp CSSCCCBCCTTSSS
T ss_pred CCCCCCccChhHcc
Confidence 88888765554443
No 356
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=98.87 E-value=3e-09 Score=112.18 Aligned_cols=91 Identities=21% Similarity=0.223 Sum_probs=54.0
Q ss_pred CCCCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCCcC---CCccce
Q 012219 2 NCSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPESV---RKVPHL 78 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~---~~l~~l 78 (468)
++++|++|+|++|++++..|..|+++++|++|+|++|++++..+..|++|++|++|+|++|++++..|..+ .+|+.|
T Consensus 47 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 126 (680)
T 1ziw_A 47 RYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITL 126 (680)
T ss_dssp GGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEE
T ss_pred CCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEE
Confidence 35566666666666666556666666666666666666663333346666666666666666664333433 334455
Q ss_pred ecccccccccCCCC
Q 012219 79 YVYGKNFDVEIPNT 92 (468)
Q Consensus 79 ~~~~n~l~~~~p~~ 92 (468)
++++|.+.+..|..
T Consensus 127 ~Ls~n~l~~~~~~~ 140 (680)
T 1ziw_A 127 DLSHNGLSSTKLGT 140 (680)
T ss_dssp ECCSSCCSCCCCCS
T ss_pred ECCCCcccccCchh
Confidence 66666665554443
No 357
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=98.86 E-value=2.6e-09 Score=102.16 Aligned_cols=86 Identities=21% Similarity=0.309 Sum_probs=70.4
Q ss_pred CCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCCcC-CCccceeccc
Q 012219 4 SKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPESV-RKVPHLYVYG 82 (468)
Q Consensus 4 ~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~-~~l~~l~~~~ 82 (468)
++|+.|+|++|++++..+..|+++++|++|+|++|++++..|..|+++++|+.|+|++|+++ .+|..+ .+++.|++++
T Consensus 52 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~~L~~L~l~~ 130 (330)
T 1xku_A 52 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMPKTLQELRVHE 130 (330)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCCTTCCEEECCS
T ss_pred CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhcccccEEECCC
Confidence 46888999999998665668889999999999999999777888999999999999999988 677644 5678888888
Q ss_pred ccccccCC
Q 012219 83 KNFDVEIP 90 (468)
Q Consensus 83 n~l~~~~p 90 (468)
|.+....+
T Consensus 131 n~l~~~~~ 138 (330)
T 1xku_A 131 NEITKVRK 138 (330)
T ss_dssp SCCCBBCH
T ss_pred CcccccCH
Confidence 88765443
No 358
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=98.86 E-value=4e-09 Score=101.89 Aligned_cols=82 Identities=22% Similarity=0.241 Sum_probs=65.8
Q ss_pred CCCCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCC--c---CCCcc
Q 012219 2 NCSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPE--S---VRKVP 76 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~--~---~~~l~ 76 (468)
++++|+.|+|++|++++..|..|+++++|++|+|++|++++..+..|+++++|+.|+|++|+++ .+|. . +.+|+
T Consensus 74 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~ 152 (353)
T 2z80_A 74 RCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQ 152 (353)
T ss_dssp TCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCC
T ss_pred cCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCc
Confidence 5788999999999999777778999999999999999998544445888999999999999988 5665 3 44566
Q ss_pred ceeccccc
Q 012219 77 HLYVYGKN 84 (468)
Q Consensus 77 ~l~~~~n~ 84 (468)
.|++++|+
T Consensus 153 ~L~l~~n~ 160 (353)
T 2z80_A 153 ILRVGNMD 160 (353)
T ss_dssp EEEEEESS
T ss_pred EEECCCCc
Confidence 67888875
No 359
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=98.84 E-value=4.9e-09 Score=102.70 Aligned_cols=87 Identities=17% Similarity=0.251 Sum_probs=74.0
Q ss_pred CCCCCCcEEEccCCcccccCCcccccCCCCCEeeccCcccccccccc-ccCCCCCceecccCcccccccCCcC---CCcc
Q 012219 1 MNCSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQ-LGEIPRIDTVDLSMNNLSGSIPESV---RKVP 76 (468)
Q Consensus 1 ~~l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~-~~~l~~L~~l~l~~N~l~g~~p~~~---~~l~ 76 (468)
+++++|+.|+|++|++++..|..|+++++|++|+|++|+++ .+|.. |+++++|+.|+|++|++++..|..+ .+|+
T Consensus 90 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 168 (390)
T 3o6n_A 90 AYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQ 168 (390)
T ss_dssp TTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCC
T ss_pred cCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccC-cCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCC
Confidence 36889999999999999777788999999999999999999 56655 6999999999999999997666555 4566
Q ss_pred ceeccccccccc
Q 012219 77 HLYVYGKNFDVE 88 (468)
Q Consensus 77 ~l~~~~n~l~~~ 88 (468)
.|++++|.+...
T Consensus 169 ~L~l~~n~l~~~ 180 (390)
T 3o6n_A 169 NLQLSSNRLTHV 180 (390)
T ss_dssp EEECCSSCCSBC
T ss_pred EEECCCCcCCcc
Confidence 788999988654
No 360
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=98.84 E-value=1.6e-09 Score=103.17 Aligned_cols=86 Identities=21% Similarity=0.270 Sum_probs=73.5
Q ss_pred CCCCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCCcCCCccceecc
Q 012219 2 NCSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPESVRKVPHLYVY 81 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~~ 81 (468)
.+++|+.|+|++|++++..|..|+++++|++|+|++|++++..| +..+++|+.|+|++|++++ +|.. .+++.|+++
T Consensus 32 ~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~-l~~~-~~L~~L~l~ 107 (317)
T 3o53_A 32 SAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQE-LLVG-PSIETLHAA 107 (317)
T ss_dssp TGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEE-EEEC-TTCCEEECC
T ss_pred cCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCcccc-ccCC-CCcCEEECC
Confidence 35689999999999997777899999999999999999997665 9999999999999999994 5532 678888999
Q ss_pred cccccccCCC
Q 012219 82 GKNFDVEIPN 91 (468)
Q Consensus 82 ~n~l~~~~p~ 91 (468)
+|.+....+.
T Consensus 108 ~n~l~~~~~~ 117 (317)
T 3o53_A 108 NNNISRVSCS 117 (317)
T ss_dssp SSCCSEEEEC
T ss_pred CCccCCcCcc
Confidence 8888765443
No 361
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.83 E-value=2.6e-09 Score=97.92 Aligned_cols=67 Identities=30% Similarity=0.426 Sum_probs=55.3
Q ss_pred CCCCCcEEEccCCcccc--cCCcccccCCCCCEeeccCccccccccccccCCC--CCceecccCcccccccCC
Q 012219 2 NCSKLRVLELGNNLLSG--SIPSEINKLQELNYLNLSHNSINGKILSQLGEIP--RIDTVDLSMNNLSGSIPE 70 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g--~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~--~L~~l~l~~N~l~g~~p~ 70 (468)
++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|+.|+|++|.+++.+|+
T Consensus 168 ~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~ 238 (267)
T 3rw6_A 168 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRD 238 (267)
T ss_dssp HCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSS
T ss_pred hCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCc
Confidence 47889999999999997 6677888999999999999999965 3344444 899999999999987774
No 362
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=98.80 E-value=4e-09 Score=95.92 Aligned_cols=92 Identities=12% Similarity=0.141 Sum_probs=72.4
Q ss_pred CCCCCcEEEccCCc-ccccCCcccccCCCCCEeeccC-ccccccccccccCCCCCceecccCcccccccCC--cCCCcc-
Q 012219 2 NCSKLRVLELGNNL-LSGSIPSEINKLQELNYLNLSH-NSINGKILSQLGEIPRIDTVDLSMNNLSGSIPE--SVRKVP- 76 (468)
Q Consensus 2 ~l~~l~~l~l~~N~-l~g~~p~~~~~l~~L~~L~l~~-N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~--~~~~l~- 76 (468)
++++|+.|+|++|+ +++..+..|.++++|++|+|++ |+|++..|..|.++++|+.|++++|++++ +|. .+.+++
T Consensus 53 ~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~~~~l~~L~~ 131 (239)
T 2xwt_C 53 NLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPDLTKVYSTDI 131 (239)
T ss_dssp TCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCCCTTCCBCCS
T ss_pred CCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-cccccccccccc
Confidence 57899999999997 8844455799999999999998 99996666789999999999999999994 786 344555
Q ss_pred --ceecccc-cccccCCCCCC
Q 012219 77 --HLYVYGK-NFDVEIPNTSE 94 (468)
Q Consensus 77 --~l~~~~n-~l~~~~p~~~~ 94 (468)
.|++++| .+....+..+.
T Consensus 132 L~~L~l~~N~~l~~i~~~~~~ 152 (239)
T 2xwt_C 132 FFILEITDNPYMTSIPVNAFQ 152 (239)
T ss_dssp EEEEEEESCTTCCEECTTTTT
T ss_pred ccEEECCCCcchhhcCccccc
Confidence 7778888 77655444443
No 363
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=98.80 E-value=5.1e-09 Score=100.80 Aligned_cols=85 Identities=27% Similarity=0.415 Sum_probs=63.0
Q ss_pred CCCCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCCc---CCCccce
Q 012219 2 NCSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPES---VRKVPHL 78 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~---~~~l~~l 78 (468)
++++|+.|+|++|.+++ + +.+..+++|++|+|++|++++. +.+..+++|+.|++++|++++..|.. +.+++.|
T Consensus 241 ~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L 316 (347)
T 4fmz_A 241 NLSQLTWLEIGTNQISD-I-NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTL 316 (347)
T ss_dssp TCTTCCEEECCSSCCCC-C-GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEE
T ss_pred cCCCCCEEECCCCccCC-C-hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEE
Confidence 56788888888888874 4 4677888888888888888853 35778888888888888888666553 4556667
Q ss_pred ecccccccccCC
Q 012219 79 YVYGKNFDVEIP 90 (468)
Q Consensus 79 ~~~~n~l~~~~p 90 (468)
++++|.+....|
T Consensus 317 ~L~~n~l~~~~~ 328 (347)
T 4fmz_A 317 FLSQNHITDIRP 328 (347)
T ss_dssp ECCSSSCCCCGG
T ss_pred EccCCccccccC
Confidence 788888776554
No 364
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=98.80 E-value=5.8e-09 Score=97.90 Aligned_cols=82 Identities=28% Similarity=0.459 Sum_probs=61.7
Q ss_pred CCCCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccC-CcCCCccceec
Q 012219 2 NCSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIP-ESVRKVPHLYV 80 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p-~~~~~l~~l~~ 80 (468)
++++|+.|+|++|++++ + +.+..+++|+.|+|++|++++. ..++.+++|+.|+|++|++++..| ..+.+|+.|++
T Consensus 110 ~l~~L~~L~L~~n~i~~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~l~~l~~L~~L~L 185 (291)
T 1h6t_A 110 DLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYL 185 (291)
T ss_dssp TCTTCCEEECTTSCCCC-C-GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGGGTTCTTCCEEEC
T ss_pred cCCCCCEEECCCCcCCC-C-hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchhhcCCCccCEEEC
Confidence 57788888888888884 4 4688888888888888888854 578888888888888888885433 13445666778
Q ss_pred ccccccc
Q 012219 81 YGKNFDV 87 (468)
Q Consensus 81 ~~n~l~~ 87 (468)
++|.+..
T Consensus 186 ~~N~i~~ 192 (291)
T 1h6t_A 186 SKNHISD 192 (291)
T ss_dssp CSSCCCB
T ss_pred CCCcCCC
Confidence 8887765
No 365
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=98.79 E-value=8.5e-09 Score=95.22 Aligned_cols=82 Identities=17% Similarity=0.303 Sum_probs=68.9
Q ss_pred CCCCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCC-cCCCccceec
Q 012219 2 NCSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPE-SVRKVPHLYV 80 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~-~~~~l~~l~~ 80 (468)
++++|+.|+|++|+++ .+| .++.+++|++|+|++|+|++. |. +.++++|+.|+|++|++++ +|. ...+|..|++
T Consensus 39 ~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~-~~-l~~l~~L~~L~L~~N~l~~-l~~~~~~~L~~L~L 113 (263)
T 1xeu_A 39 ELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDL-SP-LKDLTKLEELSVNRNRLKN-LNGIPSACLSRLFL 113 (263)
T ss_dssp HHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCSSCCEEECCSSCCSC-CTTCCCSSCCEEEC
T ss_pred hcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCC-hh-hccCCCCCEEECCCCccCC-cCccccCcccEEEc
Confidence 3678999999999998 787 799999999999999999955 44 9999999999999999995 554 2267888899
Q ss_pred cccccccc
Q 012219 81 YGKNFDVE 88 (468)
Q Consensus 81 ~~n~l~~~ 88 (468)
++|.+...
T Consensus 114 ~~N~l~~~ 121 (263)
T 1xeu_A 114 DNNELRDT 121 (263)
T ss_dssp CSSCCSBS
T ss_pred cCCccCCC
Confidence 99888763
No 366
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=98.79 E-value=8.5e-09 Score=105.45 Aligned_cols=76 Identities=20% Similarity=0.287 Sum_probs=44.8
Q ss_pred CCCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCCcCCCccceeccc
Q 012219 3 CSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPESVRKVPHLYVYG 82 (468)
Q Consensus 3 l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~~~ 82 (468)
+++|+.|+|++|+|++ +|. +++ +|++|+|++|+|++ +|. .+++|+.|+|++|+|++ +|..+.+|..|++++
T Consensus 99 l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~~l~~L~~L~Ls~ 169 (571)
T 3cvr_A 99 PASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPELPTSLEVLSVRN 169 (571)
T ss_dssp CTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCCCCTTCCEEECCS
T ss_pred cCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCCcCCCcCEEECCC
Confidence 4556666666666663 555 444 56666666666664 554 45666666666666663 555555566666666
Q ss_pred ccccc
Q 012219 83 KNFDV 87 (468)
Q Consensus 83 n~l~~ 87 (468)
|.+.+
T Consensus 170 N~L~~ 174 (571)
T 3cvr_A 170 NQLTF 174 (571)
T ss_dssp SCCSC
T ss_pred CCCCC
Confidence 66554
No 367
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=98.78 E-value=5.1e-09 Score=110.34 Aligned_cols=87 Identities=24% Similarity=0.355 Sum_probs=53.5
Q ss_pred CCCCCcEEEccCCcccccC----C----cccccCCCCCEeeccCccccccccc-cccCCCCCceecccCcccccccCC-c
Q 012219 2 NCSKLRVLELGNNLLSGSI----P----SEINKLQELNYLNLSHNSINGKILS-QLGEIPRIDTVDLSMNNLSGSIPE-S 71 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g~~----p----~~~~~l~~L~~L~l~~N~l~g~~p~-~~~~l~~L~~l~l~~N~l~g~~p~-~ 71 (468)
++++|+.|+|++|++++.. | ..|+++++|+.|+|++|+|+ .+|. .|.+|++|+.|+|++|+++ .+|. .
T Consensus 502 ~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~-~i~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~ 579 (680)
T 1ziw_A 502 GLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFD-EIPVEVFKDLFELKIIDLGLNNLN-TLPASV 579 (680)
T ss_dssp TCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCC-CCCTTT
T ss_pred cccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCC-CCCHHHcccccCcceeECCCCCCC-cCCHhH
Confidence 4667777777777776431 1 12666777777777777777 4443 4677777777777777777 3443 2
Q ss_pred C---CCccceecccccccccCC
Q 012219 72 V---RKVPHLYVYGKNFDVEIP 90 (468)
Q Consensus 72 ~---~~l~~l~~~~n~l~~~~p 90 (468)
+ .+|+.|++++|.+++..|
T Consensus 580 ~~~l~~L~~L~L~~N~l~~~~~ 601 (680)
T 1ziw_A 580 FNNQVSLKSLNLQKNLITSVEK 601 (680)
T ss_dssp TTTCTTCCEEECTTSCCCBCCH
T ss_pred hCCCCCCCEEECCCCcCCccCh
Confidence 2 445556666666665443
No 368
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=98.77 E-value=5.2e-09 Score=99.48 Aligned_cols=83 Identities=16% Similarity=0.199 Sum_probs=41.3
Q ss_pred CCCCcEEEccCCcccccCCcccccCCCCCEeeccCcccccccccccc-CCCCCceecccCcccccccCC--cCCCcccee
Q 012219 3 CSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLG-EIPRIDTVDLSMNNLSGSIPE--SVRKVPHLY 79 (468)
Q Consensus 3 l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~-~l~~L~~l~l~~N~l~g~~p~--~~~~l~~l~ 79 (468)
+++|+.|+|++|++++..|..++.+++|++|+|++|++++..|..+. .+++|+.|+|++|++++ +|. .+.++..|+
T Consensus 119 ~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~l~~L~~L~ 197 (317)
T 3o53_A 119 GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYD-VKGQVVFAKLKTLD 197 (317)
T ss_dssp CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCE-EECCCCCTTCCEEE
T ss_pred cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCcc-cccccccccCCEEE
Confidence 34455555555555544444555555555555555555554444442 45555555555555552 232 133444444
Q ss_pred ccccccc
Q 012219 80 VYGKNFD 86 (468)
Q Consensus 80 ~~~n~l~ 86 (468)
+++|.+.
T Consensus 198 Ls~N~l~ 204 (317)
T 3o53_A 198 LSSNKLA 204 (317)
T ss_dssp CCSSCCC
T ss_pred CCCCcCC
Confidence 4444443
No 369
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=98.76 E-value=1.2e-08 Score=105.43 Aligned_cols=83 Identities=28% Similarity=0.432 Sum_probs=59.9
Q ss_pred CCCCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCC-cCCCccceec
Q 012219 2 NCSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPE-SVRKVPHLYV 80 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~-~~~~l~~l~~ 80 (468)
+|++|+.|+|++|+|++ + +.+..|++|+.|+|++|+|++. ..|..|++|+.|+|++|+|++..|- .+.+|..|++
T Consensus 107 ~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~l~~l~~L~~L~L 182 (605)
T 1m9s_A 107 DLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYL 182 (605)
T ss_dssp TCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGGGTTCTTCCEEEC
T ss_pred cCCCCCEEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchhhccCCCCCEEEC
Confidence 56778888888888874 4 4577888888888888888754 5677888888888888888765441 3345566777
Q ss_pred cccccccc
Q 012219 81 YGKNFDVE 88 (468)
Q Consensus 81 ~~n~l~~~ 88 (468)
++|.+...
T Consensus 183 s~N~i~~l 190 (605)
T 1m9s_A 183 SKNHISDL 190 (605)
T ss_dssp CSSCCCBC
T ss_pred cCCCCCCC
Confidence 77777653
No 370
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=98.75 E-value=1.3e-08 Score=96.32 Aligned_cols=82 Identities=15% Similarity=0.258 Sum_probs=52.5
Q ss_pred CCCCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCC--cCCCcccee
Q 012219 2 NCSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPE--SVRKVPHLY 79 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~--~~~~l~~l~ 79 (468)
++++|+.|+|++|++++ +|+ ++.+++|++|+|++|++++..| ++++++|+.|+|++|++++ +|. .+.+|+.|+
T Consensus 105 ~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~~l~~l~~L~~L~ 179 (308)
T 1h6u_A 105 GLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSD-LTPLANLSKLTTLK 179 (308)
T ss_dssp TCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-CGGGTTCTTCCEEE
T ss_pred CCCCCCEEECCCCCCCC-chh-hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCC-ChhhcCCCCCCEEE
Confidence 46677777777777773 443 7777777777777777774433 6677777777777777763 332 334455566
Q ss_pred ccccccccc
Q 012219 80 VYGKNFDVE 88 (468)
Q Consensus 80 ~~~n~l~~~ 88 (468)
+++|.+...
T Consensus 180 l~~n~l~~~ 188 (308)
T 1h6u_A 180 ADDNKISDI 188 (308)
T ss_dssp CCSSCCCCC
T ss_pred CCCCccCcC
Confidence 666666543
No 371
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=98.75 E-value=1.1e-08 Score=95.84 Aligned_cols=79 Identities=15% Similarity=0.204 Sum_probs=39.4
Q ss_pred CCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCC--cCCCccceecc
Q 012219 4 SKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPE--SVRKVPHLYVY 81 (468)
Q Consensus 4 ~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~--~~~~l~~l~~~ 81 (468)
++|+.|++++|.++ .+| .++.+++|++|+|++|++++..| +.++++|+.|+|++|++++ +|. .+.+|+.|+++
T Consensus 46 ~~L~~L~l~~~~i~-~~~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~~l~~l~~L~~L~L~ 120 (291)
T 1h6t_A 46 NSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LSSLKDLKKLKSLSLE 120 (291)
T ss_dssp HTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GGGGTTCTTCCEEECT
T ss_pred CcccEEEccCCCcc-cCh-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-ChhhccCCCCCEEECC
Confidence 44555555555555 333 25555555555555555553322 5555555555555555552 332 23334445555
Q ss_pred cccccc
Q 012219 82 GKNFDV 87 (468)
Q Consensus 82 ~n~l~~ 87 (468)
+|.+..
T Consensus 121 ~n~i~~ 126 (291)
T 1h6t_A 121 HNGISD 126 (291)
T ss_dssp TSCCCC
T ss_pred CCcCCC
Confidence 555443
No 372
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=98.74 E-value=3.3e-10 Score=99.97 Aligned_cols=60 Identities=22% Similarity=0.298 Sum_probs=28.5
Q ss_pred CCCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccc
Q 012219 3 CSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLS 65 (468)
Q Consensus 3 l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~ 65 (468)
+++|+.|+|++|+|++ +| .++++++|++|+|++|+++ .+|..+..+++|+.|+|++|+++
T Consensus 47 l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~ 106 (198)
T 1ds9_A 47 LKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIA 106 (198)
T ss_dssp TTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECC
T ss_pred CCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCC
Confidence 3444444454444442 44 4444444444555444444 34444444444444444444444
No 373
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=98.74 E-value=1.4e-08 Score=96.02 Aligned_cols=84 Identities=21% Similarity=0.347 Sum_probs=69.7
Q ss_pred CCCCCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCC--cCCCccce
Q 012219 1 MNCSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPE--SVRKVPHL 78 (468)
Q Consensus 1 ~~l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~--~~~~l~~l 78 (468)
+++++|+.|+|++|++++ +| .++++++|++|+|++|++++ +|. +..+++|+.|+|++|++++ +|. .+.+|+.|
T Consensus 82 ~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~-~~~l~~l~~L~~L 156 (308)
T 1h6u_A 82 KNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYLDLNQITN-ISPLAGLTNLQYL 156 (308)
T ss_dssp TTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCC-CGGGGGCTTCCEE
T ss_pred ccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEECCCCccCc-CccccCCCCccEE
Confidence 368899999999999984 54 79999999999999999995 453 9999999999999999995 443 45667788
Q ss_pred ecccccccccC
Q 012219 79 YVYGKNFDVEI 89 (468)
Q Consensus 79 ~~~~n~l~~~~ 89 (468)
++++|.+....
T Consensus 157 ~l~~n~l~~~~ 167 (308)
T 1h6u_A 157 SIGNAQVSDLT 167 (308)
T ss_dssp ECCSSCCCCCG
T ss_pred EccCCcCCCCh
Confidence 99999887643
No 374
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.73 E-value=6.1e-08 Score=92.17 Aligned_cols=137 Identities=19% Similarity=0.150 Sum_probs=98.7
Q ss_pred CccccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccC----CceeeEEEEEeeCCEEEE
Q 012219 171 DFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRH----RNIVKLYGFCLHRKCMFL 246 (468)
Q Consensus 171 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h----~niv~l~~~~~~~~~~~l 246 (468)
.....+.++.|....||+. ++.+++|+...... ...+.+|.+++..+.+ ..+.+++++ +..++
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~~~-----~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~l 104 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRDSV-----RISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFN 104 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSHHH-----HHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcHHH-----HHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEE
Confidence 4555678999999999998 56788887754321 2457889998888865 223445554 45689
Q ss_pred EEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcC----------------------------------
Q 012219 247 IYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDC---------------------------------- 292 (468)
Q Consensus 247 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~---------------------------------- 292 (468)
||||++|.++..... ..++..+...++.+++..++.||...
T Consensus 105 vme~i~G~~l~~~~~-----~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (320)
T 3r70_A 105 IMKYIKGERITYEQY-----HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQ 179 (320)
T ss_dssp EEECCCCBCCCHHHH-----TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTT
T ss_pred EEeecCCcccccccc-----ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcc
Confidence 999999988864321 12556666777777888777777432
Q ss_pred --------------------------CCCeEecCCCCCceeeCCCCCeEEeeccccccc
Q 012219 293 --------------------------TPPIVHRDISSNNVLLNSELEAFVADFGVARLL 325 (468)
Q Consensus 293 --------------------------~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~ 325 (468)
...++|+|++|.||+++.+..+.|.||+.+...
T Consensus 180 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 180 LLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp CCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred cccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 123599999999999999766789999988653
No 375
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=98.72 E-value=1.5e-08 Score=93.51 Aligned_cols=80 Identities=16% Similarity=0.285 Sum_probs=47.6
Q ss_pred CCCCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCC--cCCCcccee
Q 012219 2 NCSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPE--SVRKVPHLY 79 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~--~~~~l~~l~ 79 (468)
++++|+.|+|++|+|+ .+|+ ++++++|++|+|++|++++ +|.. .. ++|+.|+|++|++++ +|. .+.+|+.|+
T Consensus 61 ~l~~L~~L~L~~N~i~-~~~~-l~~l~~L~~L~L~~N~l~~-l~~~-~~-~~L~~L~L~~N~l~~-~~~l~~l~~L~~L~ 134 (263)
T 1xeu_A 61 FFTNLKELHLSHNQIS-DLSP-LKDLTKLEELSVNRNRLKN-LNGI-PS-ACLSRLFLDNNELRD-TDSLIHLKNLEILS 134 (263)
T ss_dssp GCTTCCEEECCSSCCC-CCGG-GTTCSSCCEEECCSSCCSC-CTTC-CC-SSCCEEECCSSCCSB-SGGGTTCTTCCEEE
T ss_pred hCCCCCEEECCCCccC-CChh-hccCCCCCEEECCCCccCC-cCcc-cc-CcccEEEccCCccCC-ChhhcCcccccEEE
Confidence 4677788888888887 4444 7777777777777777774 3322 22 555555555555553 332 233344455
Q ss_pred cccccccc
Q 012219 80 VYGKNFDV 87 (468)
Q Consensus 80 ~~~n~l~~ 87 (468)
+++|.+..
T Consensus 135 Ls~N~i~~ 142 (263)
T 1xeu_A 135 IRNNKLKS 142 (263)
T ss_dssp CTTSCCCB
T ss_pred CCCCcCCC
Confidence 55555443
No 376
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=98.69 E-value=3e-09 Score=104.06 Aligned_cols=86 Identities=17% Similarity=0.238 Sum_probs=59.2
Q ss_pred CCCCCcEEEccCCccc--c---cCCcccccCCCCCEeeccCcccc----ccccccccCCCCCceecccCcccccc----c
Q 012219 2 NCSKLRVLELGNNLLS--G---SIPSEINKLQELNYLNLSHNSIN----GKILSQLGEIPRIDTVDLSMNNLSGS----I 68 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~--g---~~p~~~~~l~~L~~L~l~~N~l~----g~~p~~~~~l~~L~~l~l~~N~l~g~----~ 68 (468)
++++|+.|+|++|+|+ | .+|..+..+++|+.|+|++|.|+ +.+|..+..+++|+.|+|++|++++. +
T Consensus 185 ~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l 264 (386)
T 2ca6_A 185 SHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAV 264 (386)
T ss_dssp HCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHH
T ss_pred hCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHH
Confidence 3567777777777776 3 34446777777777777777775 56777777777777777777777654 3
Q ss_pred CCc-----CCCccceecccccccc
Q 012219 69 PES-----VRKVPHLYVYGKNFDV 87 (468)
Q Consensus 69 p~~-----~~~l~~l~~~~n~l~~ 87 (468)
|.. ..+|..|++++|.+..
T Consensus 265 ~~~l~~~~~~~L~~L~L~~n~i~~ 288 (386)
T 2ca6_A 265 VDAFSKLENIGLQTLRLQYNEIEL 288 (386)
T ss_dssp HHHHHTCSSCCCCEEECCSSCCBH
T ss_pred HHHHhhccCCCeEEEECcCCcCCH
Confidence 443 4556667777777665
No 377
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=98.68 E-value=1.6e-09 Score=108.39 Aligned_cols=84 Identities=15% Similarity=0.127 Sum_probs=46.9
Q ss_pred CCCCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCC-------------ceecccCccccccc
Q 012219 2 NCSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRI-------------DTVDLSMNNLSGSI 68 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L-------------~~l~l~~N~l~g~~ 68 (468)
+.++|+.|++++|+| |.+|++|++|++|++|+|++|+++|.+|.+++++++| +.|++++|+++ .+
T Consensus 9 ~~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~-~l 86 (454)
T 1jl5_A 9 SNTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLS-SL 86 (454)
T ss_dssp --------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCS-CC
T ss_pred ccccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCccc-cC
Confidence 357899999999999 7999999999999999999999999999999888764 77777777777 46
Q ss_pred CCcCCCccceecccccccc
Q 012219 69 PESVRKVPHLYVYGKNFDV 87 (468)
Q Consensus 69 p~~~~~l~~l~~~~n~l~~ 87 (468)
|....+++.|++++|.+.+
T Consensus 87 p~~~~~L~~L~l~~n~l~~ 105 (454)
T 1jl5_A 87 PELPPHLESLVASCNSLTE 105 (454)
T ss_dssp CSCCTTCSEEECCSSCCSS
T ss_pred CCCcCCCCEEEccCCcCCc
Confidence 6655666777777777665
No 378
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=98.68 E-value=2.7e-08 Score=101.73 Aligned_cols=74 Identities=22% Similarity=0.381 Sum_probs=38.2
Q ss_pred CCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCCcCC-Cccceecccc
Q 012219 5 KLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPESVR-KVPHLYVYGK 83 (468)
Q Consensus 5 ~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~~-~l~~l~~~~n 83 (468)
+|+.|+|++|+|++ +|..+. ++|++|+|++|+|+ .+| ..+++|+.|+|++|+|++ +|. +. +|..|++++|
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~~L~~L~Ls~N 130 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPASLKHLDVDNN 130 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCTTCCEEECCSS
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhcCCCEEECCCC
Confidence 55556666666653 555443 45555555555555 445 334555555555555553 444 33 4444555555
Q ss_pred cccc
Q 012219 84 NFDV 87 (468)
Q Consensus 84 ~l~~ 87 (468)
.+.+
T Consensus 131 ~l~~ 134 (571)
T 3cvr_A 131 QLTM 134 (571)
T ss_dssp CCSC
T ss_pred cCCC
Confidence 5444
No 379
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=98.67 E-value=2.8e-08 Score=99.44 Aligned_cols=74 Identities=20% Similarity=0.281 Sum_probs=57.5
Q ss_pred CCCCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCCcCCCccceecc
Q 012219 2 NCSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPESVRKVPHLYVY 81 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~~ 81 (468)
++++|+.|+|++|+|++ + .++.+++|+.|+|++|+|++ +| ++.+++|+.|++++|++++..+..+.+++.|+++
T Consensus 189 ~l~~L~~L~l~~N~l~~-~--~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~~l~~L~~L~l~ 262 (457)
T 3bz5_A 189 QNKLLNRLNCDTNNITK-L--DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDVSTLSKLTTLHCI 262 (457)
T ss_dssp TCTTCCEEECCSSCCSC-C--CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCTTCTTCCEEECT
T ss_pred cCCCCCEEECcCCcCCe-e--ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCHHHCCCCCEEecc
Confidence 57788899999999885 3 38888889999999999986 66 8888889999999998887555556655544333
No 380
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=98.67 E-value=1.7e-09 Score=95.44 Aligned_cols=82 Identities=21% Similarity=0.268 Sum_probs=73.2
Q ss_pred CCCCcEEEccCCcccccCCc------ccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCCcC---C
Q 012219 3 CSKLRVLELGNNLLSGSIPS------EINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPESV---R 73 (468)
Q Consensus 3 l~~l~~l~l~~N~l~g~~p~------~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~---~ 73 (468)
..+++.++|+.|.|+|.+|. .|+++++|++|+|++|++++ +| .+.++++|+.|+|++|+++ .+|..+ .
T Consensus 17 ~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~ 93 (198)
T 1ds9_A 17 RKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVAD 93 (198)
T ss_dssp TTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHH
T ss_pred cccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCC
Confidence 46788899999999999998 99999999999999999996 78 9999999999999999999 788744 5
Q ss_pred Cccceecccccccc
Q 012219 74 KVPHLYVYGKNFDV 87 (468)
Q Consensus 74 ~l~~l~~~~n~l~~ 87 (468)
+++.|++++|.+.+
T Consensus 94 ~L~~L~L~~N~l~~ 107 (198)
T 1ds9_A 94 TLEELWISYNQIAS 107 (198)
T ss_dssp HCSEEEEEEEECCC
T ss_pred cCCEEECcCCcCCc
Confidence 67788999988765
No 381
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=98.67 E-value=3.2e-08 Score=102.16 Aligned_cols=84 Identities=25% Similarity=0.423 Sum_probs=66.5
Q ss_pred CCCCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCC--cCCCcccee
Q 012219 2 NCSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPE--SVRKVPHLY 79 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~--~~~~l~~l~ 79 (468)
+|++|+.|+|++|+|+ .+| .+++|++|+.|+|++|+|++ + +.+.+|++|+.|+|++|++++ ++. .+.+|..|+
T Consensus 85 ~l~~L~~L~Ls~N~l~-~l~-~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~-l~~l~~l~~L~~L~ 159 (605)
T 1m9s_A 85 NLKNLGWLFLDENKIK-DLS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITD-ITVLSRLTKLDTLS 159 (605)
T ss_dssp GCTTCCEEECCSSCCC-CCT-TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCC-CGGGGSCTTCSEEE
T ss_pred cCCCCCEEECcCCCCC-CCh-hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEECCCCccCC-chhhcccCCCCEEE
Confidence 5788999999999988 455 78888999999999999885 3 368888999999999999885 442 456677788
Q ss_pred cccccccccCC
Q 012219 80 VYGKNFDVEIP 90 (468)
Q Consensus 80 ~~~n~l~~~~p 90 (468)
+++|.+....|
T Consensus 160 Ls~N~l~~~~~ 170 (605)
T 1m9s_A 160 LEDNQISDIVP 170 (605)
T ss_dssp CCSSCCCCCGG
T ss_pred CcCCcCCCchh
Confidence 88888877655
No 382
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=98.60 E-value=5.5e-08 Score=93.51 Aligned_cols=86 Identities=20% Similarity=0.470 Sum_probs=68.6
Q ss_pred CCCCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCC--cCCCcccee
Q 012219 2 NCSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPE--SVRKVPHLY 79 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~--~~~~l~~l~ 79 (468)
++++|+.|+|++|+++ .+|. +..+++|++|+|++|++++ + +.+..+++|+.|++++|++++ +|. .+.+++.|+
T Consensus 219 ~~~~L~~L~l~~n~l~-~~~~-~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~-~~~~~~l~~L~~L~ 293 (347)
T 4fmz_A 219 NMTRLNSLKIGNNKIT-DLSP-LANLSQLTWLEIGTNQISD-I-NAVKDLTKLKMLNVGSNQISD-ISVLNNLSQLNSLF 293 (347)
T ss_dssp GCTTCCEEECCSSCCC-CCGG-GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCCEEECCSSCCCC-CGGGGGCTTCSEEE
T ss_pred cCCcCCEEEccCCccC-CCcc-hhcCCCCCEEECCCCccCC-C-hhHhcCCCcCEEEccCCccCC-ChhhcCCCCCCEEE
Confidence 4788999999999998 5555 8889999999999999985 4 468899999999999999984 553 456777888
Q ss_pred cccccccccCCCC
Q 012219 80 VYGKNFDVEIPNT 92 (468)
Q Consensus 80 ~~~n~l~~~~p~~ 92 (468)
+++|.+....|..
T Consensus 294 L~~n~l~~~~~~~ 306 (347)
T 4fmz_A 294 LNNNQLGNEDMEV 306 (347)
T ss_dssp CCSSCCCGGGHHH
T ss_pred CcCCcCCCcChhH
Confidence 9988887655443
No 383
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=98.60 E-value=1.1e-08 Score=97.96 Aligned_cols=79 Identities=13% Similarity=0.172 Sum_probs=51.3
Q ss_pred CCCcEEEccCCcccccCCcccccCCCCCEeeccCcccccc-ccccccCCCCCceecccCcccccccCCc---CCCcccee
Q 012219 4 SKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGK-ILSQLGEIPRIDTVDLSMNNLSGSIPES---VRKVPHLY 79 (468)
Q Consensus 4 ~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~-~p~~~~~l~~L~~l~l~~N~l~g~~p~~---~~~l~~l~ 79 (468)
++|+.|+|++|.+++.+|. +.++++|++|+|++|.+++. +|..+.++++|+.|+|++|++++..|.. +.+|+.|+
T Consensus 70 ~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~ 148 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 148 (336)
T ss_dssp TTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEE
T ss_pred ccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEE
Confidence 5667777777777754443 55677777777777777655 6666777777777777777776555543 34455566
Q ss_pred cccc
Q 012219 80 VYGK 83 (468)
Q Consensus 80 ~~~n 83 (468)
+++|
T Consensus 149 L~~~ 152 (336)
T 2ast_B 149 LSGC 152 (336)
T ss_dssp CTTC
T ss_pred CCCC
Confidence 6666
No 384
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.59 E-value=3.4e-07 Score=84.69 Aligned_cols=135 Identities=19% Similarity=0.171 Sum_probs=96.0
Q ss_pred eeeeeCCc-eEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhcc-CCceeeEEEEEeeCCEEEEEEEeccC
Q 012219 177 CIGTGGYG-SVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIR-HRNIVKLYGFCLHRKCMFLIYEYMEM 253 (468)
Q Consensus 177 ~lg~G~~g-~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~ 253 (468)
.+..|..| .||+.... ++..+++|+-.... ...+.+|.+.++.+. +-.+.++++++.+.+..++|||+++|
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~~------~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G 104 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGSV------ANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPG 104 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETHH------HHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCS
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCCC------HhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCC
Confidence 45666666 58988754 56778899875432 245778999888874 33466788999999999999999999
Q ss_pred CChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcC-----------------------------------------
Q 012219 254 GSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDC----------------------------------------- 292 (468)
Q Consensus 254 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~----------------------------------------- 292 (468)
.++.+...... .....++.+++..|..||...
T Consensus 105 ~~~~~~~~~~~-------~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (272)
T 4gkh_A 105 KTAFQVLEEYP-------DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVE 177 (272)
T ss_dssp EEHHHHHHHCG-------GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHH
T ss_pred ccccccccCCH-------HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHH
Confidence 88776543221 122345556666666666321
Q ss_pred --------------CCCeEecCCCCCceeeCCCCCeEEeecccccc
Q 012219 293 --------------TPPIVHRDISSNNVLLNSELEAFVADFGVARL 324 (468)
Q Consensus 293 --------------~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~ 324 (468)
...++|+|+.+.||++++++.+-|.||+.+..
T Consensus 178 ~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 178 QVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 12389999999999999887777999988753
No 385
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=98.59 E-value=5.6e-08 Score=97.54 Aligned_cols=83 Identities=27% Similarity=0.425 Sum_probs=55.6
Q ss_pred CCCCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCC-cCCCccceec
Q 012219 2 NCSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPE-SVRKVPHLYV 80 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~-~~~~l~~l~~ 80 (468)
++++|+.|+|++|++++ +|+ ++.+++|+.|+|++|++++..| +..+++|+.|+|++|++++..|- .+.+|+.|++
T Consensus 263 ~l~~L~~L~l~~n~l~~-~~~-~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~l 338 (466)
T 1o6v_A 263 GLTKLTELKLGANQISN-ISP-LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFF 338 (466)
T ss_dssp TCTTCSEEECCSSCCCC-CGG-GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGGGGGCTTCCEEEC
T ss_pred cCCCCCEEECCCCccCc-ccc-ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchhhccCccCCEeEC
Confidence 46777777777777774 443 7777777777777777775443 67777777777777777755442 3445556666
Q ss_pred cccccccc
Q 012219 81 YGKNFDVE 88 (468)
Q Consensus 81 ~~n~l~~~ 88 (468)
++|.+.+.
T Consensus 339 ~~n~l~~~ 346 (466)
T 1o6v_A 339 YNNKVSDV 346 (466)
T ss_dssp CSSCCCCC
T ss_pred CCCccCCc
Confidence 66666553
No 386
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=98.59 E-value=4.7e-08 Score=98.08 Aligned_cols=84 Identities=23% Similarity=0.339 Sum_probs=57.5
Q ss_pred CCCCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCC--cCCCcccee
Q 012219 2 NCSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPE--SVRKVPHLY 79 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~--~~~~l~~l~ 79 (468)
++++|+.|+|++|++++ +|+ ++.+++|+.|+|++|++++..| +..+++|+.|++++|++++ +|. .+.+|..|+
T Consensus 285 ~l~~L~~L~L~~n~l~~-~~~-~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~~l~~l~~L~~L~ 359 (466)
T 1o6v_A 285 GLTALTNLELNENQLED-ISP-ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSD-VSSLANLTNINWLS 359 (466)
T ss_dssp TCTTCSEEECCSSCCSC-CGG-GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCC-CGGGTTCTTCCEEE
T ss_pred CCCccCeEEcCCCcccC-chh-hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCC-chhhccCCCCCEEe
Confidence 46778888888888874 333 7777788888888888776655 6677777777777777774 332 344555666
Q ss_pred cccccccccCC
Q 012219 80 VYGKNFDVEIP 90 (468)
Q Consensus 80 ~~~n~l~~~~p 90 (468)
+++|.+.+..|
T Consensus 360 l~~n~l~~~~~ 370 (466)
T 1o6v_A 360 AGHNQISDLTP 370 (466)
T ss_dssp CCSSCCCBCGG
T ss_pred CCCCccCccch
Confidence 77777766554
No 387
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=98.59 E-value=1.1e-07 Score=94.98 Aligned_cols=80 Identities=19% Similarity=0.200 Sum_probs=49.8
Q ss_pred CCCCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCC-cCCCccceec
Q 012219 2 NCSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPE-SVRKVPHLYV 80 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~-~~~~l~~l~~ 80 (468)
++++|+.|+|++|+|++ +| ++.+++|+.|+|++|++++. .++.+++|+.|++++|++++ +|- .+.++..|++
T Consensus 168 ~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip~~~l~~L~~L~l 240 (457)
T 3bz5_A 168 PQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-IDVTPLTQLTYFDC 240 (457)
T ss_dssp TCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CCCTTCTTCSEEEC
T ss_pred cCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cCccccCCCCEEEe
Confidence 35566666666666663 44 66666666666666666643 36666777777777777775 452 3344555667
Q ss_pred cccccccc
Q 012219 81 YGKNFDVE 88 (468)
Q Consensus 81 ~~n~l~~~ 88 (468)
++|.+.+.
T Consensus 241 ~~N~l~~~ 248 (457)
T 3bz5_A 241 SVNPLTEL 248 (457)
T ss_dssp CSSCCSCC
T ss_pred eCCcCCCc
Confidence 77766654
No 388
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=98.58 E-value=8.8e-08 Score=95.67 Aligned_cols=77 Identities=21% Similarity=0.389 Sum_probs=48.3
Q ss_pred CCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCC--cCCCccceecc
Q 012219 4 SKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPE--SVRKVPHLYVY 81 (468)
Q Consensus 4 ~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~--~~~~l~~l~~~ 81 (468)
++|+.|+|++|++++ +| +|+++++|++|++++|++++ +|..+ ++|+.|++++|++++ +|. .+.+++.|+++
T Consensus 131 ~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~~~~~l~~L~~L~l~ 203 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LPELQNLPFLTAIYAD 203 (454)
T ss_dssp TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CCCCTTCTTCCEEECC
T ss_pred CCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-CccccCCCCCCEEECC
Confidence 467888888888874 77 57778888888888777774 55433 356666666666663 552 22333445555
Q ss_pred cccccc
Q 012219 82 GKNFDV 87 (468)
Q Consensus 82 ~n~l~~ 87 (468)
+|.+.+
T Consensus 204 ~N~l~~ 209 (454)
T 1jl5_A 204 NNSLKK 209 (454)
T ss_dssp SSCCSS
T ss_pred CCcCCc
Confidence 555544
No 389
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=98.56 E-value=7.1e-08 Score=92.98 Aligned_cols=86 Identities=16% Similarity=0.167 Sum_probs=64.8
Q ss_pred CCCcEEEccCCcccccCCc-ccccCCCCCEeeccCccccccccc-cccCCCCCce-ecccCcccccccCCcC---CCccc
Q 012219 4 SKLRVLELGNNLLSGSIPS-EINKLQELNYLNLSHNSINGKILS-QLGEIPRIDT-VDLSMNNLSGSIPESV---RKVPH 77 (468)
Q Consensus 4 ~~l~~l~l~~N~l~g~~p~-~~~~l~~L~~L~l~~N~l~g~~p~-~~~~l~~L~~-l~l~~N~l~g~~p~~~---~~l~~ 77 (468)
++|+.|+|++|+|+ .||+ .|.+|++|++|+|++|++.+.+|. .|.+|++|.. +.+++|++++..|..+ .+|+.
T Consensus 30 ~~l~~L~Ls~N~i~-~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~ 108 (350)
T 4ay9_X 30 RNAIELRFVLTKLR-VIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQY 108 (350)
T ss_dssp TTCSEEEEESCCCS-EECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCE
T ss_pred CCCCEEEccCCcCC-CcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhcccccc
Confidence 46889999999998 5664 688999999999999998877775 4788888764 6667788885445544 45566
Q ss_pred eecccccccccCC
Q 012219 78 LYVYGKNFDVEIP 90 (468)
Q Consensus 78 l~~~~n~l~~~~p 90 (468)
|++++|.+....+
T Consensus 109 L~l~~n~l~~~~~ 121 (350)
T 4ay9_X 109 LLISNTGIKHLPD 121 (350)
T ss_dssp EEEEEECCSSCCC
T ss_pred ccccccccccCCc
Confidence 7888888766543
No 390
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.55 E-value=3.1e-07 Score=85.70 Aligned_cols=76 Identities=20% Similarity=0.155 Sum_probs=59.6
Q ss_pred ccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCC---ceeeEEEEEeeCCEEEEEEEe
Q 012219 174 IKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHR---NIVKLYGFCLHRKCMFLIYEY 250 (468)
Q Consensus 174 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~l~~~~~~~~~~~lv~e~ 250 (468)
..+.|+.|.++.||++...+|+.++||+...... .....|..|++.++.+++. .+.+++++. ..++||||
T Consensus 19 ~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~---~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~ 91 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAP---ALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEW 91 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCC---CCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEEC
T ss_pred ceeeeCCcchhheEEEEeCCCCeEEEEecCCCCc---chhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEe
Confidence 3567999999999999988899999999754321 1124678999999999765 577788764 25899999
Q ss_pred ccCCCh
Q 012219 251 MEMGSL 256 (468)
Q Consensus 251 ~~~gsL 256 (468)
++++++
T Consensus 92 l~g~~~ 97 (288)
T 3d1u_A 92 VDERPP 97 (288)
T ss_dssp CCCCCC
T ss_pred cccCCC
Confidence 999875
No 391
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=98.54 E-value=1.9e-08 Score=98.35 Aligned_cols=85 Identities=20% Similarity=0.313 Sum_probs=68.8
Q ss_pred CCCcEEEccCCccc-ccCC---cccccCCCCCEeeccCcccc--c---cccccccCCCCCceecccCcccc----cccCC
Q 012219 4 SKLRVLELGNNLLS-GSIP---SEINKLQELNYLNLSHNSIN--G---KILSQLGEIPRIDTVDLSMNNLS----GSIPE 70 (468)
Q Consensus 4 ~~l~~l~l~~N~l~-g~~p---~~~~~l~~L~~L~l~~N~l~--g---~~p~~~~~l~~L~~l~l~~N~l~----g~~p~ 70 (468)
++|+.|+|++|+|+ +.+| ..+..+++|++|+|++|+++ | .+|..+..+++|+.|+|++|+++ +.+|.
T Consensus 159 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~ 238 (386)
T 2ca6_A 159 PPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAI 238 (386)
T ss_dssp CCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHH
T ss_pred CCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHH
Confidence 78999999999997 5666 46788999999999999998 4 45558889999999999999996 56775
Q ss_pred cC---CCccceeccccccccc
Q 012219 71 SV---RKVPHLYVYGKNFDVE 88 (468)
Q Consensus 71 ~~---~~l~~l~~~~n~l~~~ 88 (468)
.+ .+|+.|++++|.+...
T Consensus 239 ~l~~~~~L~~L~L~~n~i~~~ 259 (386)
T 2ca6_A 239 ALKSWPNLRELGLNDCLLSAR 259 (386)
T ss_dssp HGGGCTTCCEEECTTCCCCHH
T ss_pred HHccCCCcCEEECCCCCCchh
Confidence 44 5667788998887654
No 392
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=98.53 E-value=1.3e-07 Score=97.84 Aligned_cols=34 Identities=24% Similarity=0.329 Sum_probs=15.8
Q ss_pred CCCceecccCcccccccCCcCCCccceeccccccc
Q 012219 52 PRIDTVDLSMNNLSGSIPESVRKVPHLYVYGKNFD 86 (468)
Q Consensus 52 ~~L~~l~l~~N~l~g~~p~~~~~l~~l~~~~n~l~ 86 (468)
++|+.|+|++|+|+ .+|..+.+|..|++++|.+.
T Consensus 241 ~~L~~L~Ls~N~L~-~lp~~~~~L~~L~Ls~N~L~ 274 (622)
T 3g06_A 241 SELKELMVSGNRLT-SLPMLPSGLLSLSVYRNQLT 274 (622)
T ss_dssp TTCCEEECCSSCCS-CCCCCCTTCCEEECCSSCCC
T ss_pred CcCcEEECCCCCCC-cCCcccccCcEEeCCCCCCC
Confidence 44444444444444 34444444444444444444
No 393
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=98.51 E-value=1.4e-07 Score=97.66 Aligned_cols=72 Identities=22% Similarity=0.392 Sum_probs=35.7
Q ss_pred CCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCCcCCCccceeccccc
Q 012219 5 KLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPESVRKVPHLYVYGKN 84 (468)
Q Consensus 5 ~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~~~n~ 84 (468)
+|+.|+|++|+|+ .+|. .+++|++|+|++|+|+ .+|. .+++|+.|+|++|+++ .+|..+.++..|++++|+
T Consensus 62 ~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~l~~~l~~L~~L~L~~N~ 132 (622)
T 3g06_A 62 HITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLT-HLPALPSGLCKLWIFGNQ 132 (622)
T ss_dssp TCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEECSCCCC-CCCCCCTTCCEEECCSSC
T ss_pred CCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCC-CCCCCCCCcCEEECCCCC
Confidence 4555555555555 4554 3455555555555555 3443 3444555555555554 344444444444444444
Q ss_pred c
Q 012219 85 F 85 (468)
Q Consensus 85 l 85 (468)
+
T Consensus 133 l 133 (622)
T 3g06_A 133 L 133 (622)
T ss_dssp C
T ss_pred C
Confidence 3
No 394
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.48 E-value=1e-06 Score=83.08 Aligned_cols=135 Identities=17% Similarity=0.117 Sum_probs=89.8
Q ss_pred ceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCC---ceeeEEEEEe-eCCEEEEEEEec
Q 012219 176 YCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHR---NIVKLYGFCL-HRKCMFLIYEYM 251 (468)
Q Consensus 176 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~l~~~~~-~~~~~~lv~e~~ 251 (468)
..++.|....||+. |..+++|+-... .....+.+|.+++..+.+. .+.+++.++. ..+..++||||+
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~~~-----~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i 95 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPKSQ-----QGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKV 95 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESSH-----HHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECC
T ss_pred eecCCCcceeEEEE----CCEEEEEecCCc-----hHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEecc
Confidence 45788888899988 466788875322 1235688999999999752 3556666664 345578999999
Q ss_pred cCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhc----------------------------------------
Q 012219 252 EMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHD---------------------------------------- 291 (468)
Q Consensus 252 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~---------------------------------------- 291 (468)
+|.++.+.... .++..+...++.+++..|+.||..
T Consensus 96 ~G~~l~~~~~~-----~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~ 170 (306)
T 3tdw_A 96 QGQILGEDGMA-----VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRD 170 (306)
T ss_dssp CSEECHHHHHT-----TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHH
T ss_pred CCeECchhhhh-----hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHH
Confidence 99887653111 123333344444444444444421
Q ss_pred -----------------CCCCeEecCCCCCceeeCC---CCC-eEEeecccccc
Q 012219 292 -----------------CTPPIVHRDISSNNVLLNS---ELE-AFVADFGVARL 324 (468)
Q Consensus 292 -----------------~~~~ivH~dlk~~NIll~~---~~~-~kl~Dfg~~~~ 324 (468)
....++|+|++|.||+++. ++. +.|.||+.+..
T Consensus 171 ~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 171 YLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 2346799999999999998 455 47999998754
No 395
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=98.45 E-value=4.5e-08 Score=94.83 Aligned_cols=87 Identities=23% Similarity=0.196 Sum_probs=68.5
Q ss_pred CCCCcEEEccCCcccccCC----cccccCC-CCCEeeccCccccccccccccCC-----CCCceecccCcccccccCC--
Q 012219 3 CSKLRVLELGNNLLSGSIP----SEINKLQ-ELNYLNLSHNSINGKILSQLGEI-----PRIDTVDLSMNNLSGSIPE-- 70 (468)
Q Consensus 3 l~~l~~l~l~~N~l~g~~p----~~~~~l~-~L~~L~l~~N~l~g~~p~~~~~l-----~~L~~l~l~~N~l~g~~p~-- 70 (468)
.++|+.|+|++|+|++..+ ..+.+++ +|++|+|++|+|++..+..+..+ ++|+.|+|++|++++..+.
T Consensus 21 ~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l 100 (362)
T 3goz_A 21 PHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDEL 100 (362)
T ss_dssp CTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHH
T ss_pred CCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHH
Confidence 3459999999999985555 6778888 89999999999998777777765 8999999999999865443
Q ss_pred -----cC-CCccceecccccccccC
Q 012219 71 -----SV-RKVPHLYVYGKNFDVEI 89 (468)
Q Consensus 71 -----~~-~~l~~l~~~~n~l~~~~ 89 (468)
.. .+++.|++++|.+....
T Consensus 101 ~~~l~~~~~~L~~L~Ls~N~l~~~~ 125 (362)
T 3goz_A 101 VKTLAAIPFTITVLDLGWNDFSSKS 125 (362)
T ss_dssp HHHHHTSCTTCCEEECCSSCGGGSC
T ss_pred HHHHHhCCCCccEEECcCCcCCcHH
Confidence 12 56788889988886643
No 396
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=98.43 E-value=8.8e-08 Score=92.77 Aligned_cols=81 Identities=17% Similarity=0.185 Sum_probs=53.3
Q ss_pred EEEccCCcccccCCcccccCCCCCEeeccCcccccccc----ccccCCC-CCceecccCcccccccCCcC--------CC
Q 012219 8 VLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKIL----SQLGEIP-RIDTVDLSMNNLSGSIPESV--------RK 74 (468)
Q Consensus 8 ~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p----~~~~~l~-~L~~l~l~~N~l~g~~p~~~--------~~ 74 (468)
.+.|+.|+++|.+|..+....+|++|+|++|+|++..+ ..|.+++ +|+.|+|++|++++..+..+ .+
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 35677777777777666666667777777777775555 5666776 67777777777775444321 45
Q ss_pred ccceeccccccccc
Q 012219 75 VPHLYVYGKNFDVE 88 (468)
Q Consensus 75 l~~l~~~~n~l~~~ 88 (468)
++.|++++|.+...
T Consensus 82 L~~L~Ls~n~l~~~ 95 (362)
T 3goz_A 82 VTSLNLSGNFLSYK 95 (362)
T ss_dssp CCEEECCSSCGGGS
T ss_pred ccEEECcCCcCChH
Confidence 66677777776554
No 397
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.35 E-value=2.1e-06 Score=82.90 Aligned_cols=143 Identities=14% Similarity=0.150 Sum_probs=89.8
Q ss_pred ccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCc--eeeEEEEEeeC-CEEEEEEEe
Q 012219 174 IKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRN--IVKLYGFCLHR-KCMFLIYEY 250 (468)
Q Consensus 174 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~~~~~~~-~~~~lv~e~ 250 (468)
....++.|....+|+... ++..+++|..... ..+..|..++..+.... +.++++++... +..++||||
T Consensus 45 ~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~--------~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~ 115 (362)
T 3ovc_A 45 DLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA--------DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRR 115 (362)
T ss_dssp EEEEEEECSSEEEEEEEE-TTEEEEEEEESCC--------HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEEC
T ss_pred eEEECCCCCcceEEEEEE-CCcEEEEEeCCch--------hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEe
Confidence 356688999999999986 5788899987543 14668888888886433 45677776654 568999999
Q ss_pred ccCCChhhh------------------hhcCccc--C------------CCCHHHH---------------------HHH
Q 012219 251 MEMGSLFCV------------------LRTDEEA--V------------GLDWAKR---------------------VNV 277 (468)
Q Consensus 251 ~~~gsL~~~------------------l~~~~~~--~------------~l~~~~~---------------------~~i 277 (468)
++|.++.+. ++..... . .-.|... ...
T Consensus 116 l~G~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~~ 195 (362)
T 3ovc_A 116 AQGVTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASV 195 (362)
T ss_dssp CCSEETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHHH
T ss_pred cCCCCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 998665421 1111000 0 0011111 011
Q ss_pred HHHHHHHHHHHHhc-CCCCeEecCCCCCceeeCCCCCeEEeeccccccc
Q 012219 278 VKGMCHALSYLHHD-CTPPIVHRDISSNNVLLNSELEAFVADFGVARLL 325 (468)
Q Consensus 278 ~~~ia~~l~~LH~~-~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~ 325 (468)
...+...+.++... ....++|+|+.+.||+++++..+.|.||+.+..-
T Consensus 196 ~~~~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~g 244 (362)
T 3ovc_A 196 AQALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFG 244 (362)
T ss_dssp HHHHHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEEE
T ss_pred hHHHHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccccC
Confidence 11222222333211 1256899999999999988777889999988653
No 398
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=98.35 E-value=3.1e-07 Score=87.70 Aligned_cols=61 Identities=16% Similarity=0.254 Sum_probs=41.1
Q ss_pred CC-CCcEEEccCC--ccc-ccCCcccccCCCCCEeeccCcc-ccccccccccCCCCCceecccCcc
Q 012219 3 CS-KLRVLELGNN--LLS-GSIPSEINKLQELNYLNLSHNS-INGKILSQLGEIPRIDTVDLSMNN 63 (468)
Q Consensus 3 l~-~l~~l~l~~N--~l~-g~~p~~~~~l~~L~~L~l~~N~-l~g~~p~~~~~l~~L~~l~l~~N~ 63 (468)
++ +|+.|+|++| .++ +.+|..+.++++|+.|+|++|. +++..+..+.++++|+.|+|++|.
T Consensus 193 l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~ 258 (336)
T 2ast_B 193 VSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCY 258 (336)
T ss_dssp SCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCT
T ss_pred cccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCC
Confidence 45 6777777777 444 4566666677777777777777 666666667777777777777774
No 399
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.34 E-value=1e-07 Score=87.36 Aligned_cols=80 Identities=23% Similarity=0.336 Sum_probs=62.6
Q ss_pred EEccCCcccccCCc----ccccCCCCCEeeccCccccc--cccccccCCCCCceecccCcccccccC--CcCC--Cccce
Q 012219 9 LELGNNLLSGSIPS----EINKLQELNYLNLSHNSING--KILSQLGEIPRIDTVDLSMNNLSGSIP--ESVR--KVPHL 78 (468)
Q Consensus 9 l~l~~N~l~g~~p~----~~~~l~~L~~L~l~~N~l~g--~~p~~~~~l~~L~~l~l~~N~l~g~~p--~~~~--~l~~l 78 (468)
++++.|+.. .++. ...++++|+.|+||+|+|++ .+|..+..+++|+.|+|++|+|++. . ..+. +|..|
T Consensus 148 l~l~~N~~~-~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~-~~l~~l~~l~L~~L 225 (267)
T 3rw6_A 148 IDVVLNRRS-CMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE-RELDKIKGLKLEEL 225 (267)
T ss_dssp CCCCTTSHH-HHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG-GGGGGGTTSCCSEE
T ss_pred ccccCCHHH-HHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc-hhhhhcccCCcceE
Confidence 567788544 4443 23578999999999999998 5678889999999999999999963 2 2333 77889
Q ss_pred ecccccccccCC
Q 012219 79 YVYGKNFDVEIP 90 (468)
Q Consensus 79 ~~~~n~l~~~~p 90 (468)
++.+|++++..|
T Consensus 226 ~L~~Npl~~~~~ 237 (267)
T 3rw6_A 226 WLDGNSLCDTFR 237 (267)
T ss_dssp ECTTSTTGGGCS
T ss_pred EccCCcCccccC
Confidence 999999987554
No 400
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=98.29 E-value=5.5e-07 Score=86.69 Aligned_cols=84 Identities=19% Similarity=0.226 Sum_probs=66.4
Q ss_pred CCCcEEEccCCcccccCCcccccCCCCCEeeccC-ccccccccc-cccCCCCCceecccCcccccccCC-cCCCccceec
Q 012219 4 SKLRVLELGNNLLSGSIPSEINKLQELNYLNLSH-NSINGKILS-QLGEIPRIDTVDLSMNNLSGSIPE-SVRKVPHLYV 80 (468)
Q Consensus 4 ~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~-N~l~g~~p~-~~~~l~~L~~l~l~~N~l~g~~p~-~~~~l~~l~~ 80 (468)
..|+.|+|++|+|+ .||+.....++|+.|++++ |.++ .+|. .|.++++|+.|||++|+|+ .+|. .+.+++.|..
T Consensus 154 ~~l~~L~L~~N~i~-~i~~~~f~~~~L~~l~l~~~n~l~-~i~~~~f~~l~~L~~LdLs~N~l~-~lp~~~~~~L~~L~~ 230 (350)
T 4ay9_X 154 FESVILWLNKNGIQ-EIHNSAFNGTQLDELNLSDNNNLE-ELPNDVFHGASGPVILDISRTRIH-SLPSYGLENLKKLRA 230 (350)
T ss_dssp SSCEEEECCSSCCC-EECTTSSTTEEEEEEECTTCTTCC-CCCTTTTTTEECCSEEECTTSCCC-CCCSSSCTTCCEEEC
T ss_pred hhhhhhcccccccc-CCChhhccccchhHHhhccCCccc-CCCHHHhccCcccchhhcCCCCcC-ccChhhhccchHhhh
Confidence 35888999999999 7888777788999999985 5565 7765 5899999999999999999 6765 5788888876
Q ss_pred ccccccccCC
Q 012219 81 YGKNFDVEIP 90 (468)
Q Consensus 81 ~~n~l~~~~p 90 (468)
.+++-...+|
T Consensus 231 l~~~~l~~lP 240 (350)
T 4ay9_X 231 RSTYNLKKLP 240 (350)
T ss_dssp TTCTTCCCCC
T ss_pred ccCCCcCcCC
Confidence 6554444444
No 401
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.22 E-value=1.3e-06 Score=84.34 Aligned_cols=83 Identities=7% Similarity=-0.014 Sum_probs=54.5
Q ss_pred cee-eeeCCceEEEEEcC-------CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhcc-C--CceeeEEEEEeeC---
Q 012219 176 YCI-GTGGYGSVYRARLP-------SGKVVALKKLHRSETEELASLESFGNEARLLSQIR-H--RNIVKLYGFCLHR--- 241 (468)
Q Consensus 176 ~~l-g~G~~g~Vy~~~~~-------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h--~niv~l~~~~~~~--- 241 (468)
+.| +.|....+|+.... ++..+++|...............+.+|+++++.+. + -.+.++++++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 457 78888999998764 26678888765432000000124567888888774 2 3566788887665
Q ss_pred CEEEEEEEeccCCChhh
Q 012219 242 KCMFLIYEYMEMGSLFC 258 (468)
Q Consensus 242 ~~~~lv~e~~~~gsL~~ 258 (468)
+..++||||++|..+.+
T Consensus 106 g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp SSCEEEEECCCCBCCCB
T ss_pred CCceEEEEecCCCChhh
Confidence 34689999999877653
No 402
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.19 E-value=3.8e-07 Score=91.15 Aligned_cols=86 Identities=14% Similarity=0.120 Sum_probs=71.1
Q ss_pred CCCCcEEEccCCccccc----CCcccccCCCCCEeeccCccccccccccccC-----CCCCceecccCccccc----ccC
Q 012219 3 CSKLRVLELGNNLLSGS----IPSEINKLQELNYLNLSHNSINGKILSQLGE-----IPRIDTVDLSMNNLSG----SIP 69 (468)
Q Consensus 3 l~~l~~l~l~~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~-----l~~L~~l~l~~N~l~g----~~p 69 (468)
.++|+.|+|++|.+++. +|..+..+++|++|+|++|++++..+..+.. +++|+.|+|++|++++ .+|
T Consensus 312 ~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~ 391 (461)
T 1z7x_W 312 GCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLA 391 (461)
T ss_dssp TCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHH
T ss_pred CccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHH
Confidence 46899999999999966 6777888999999999999999776665543 7899999999999996 677
Q ss_pred Cc---CCCccceeccccccccc
Q 012219 70 ES---VRKVPHLYVYGKNFDVE 88 (468)
Q Consensus 70 ~~---~~~l~~l~~~~n~l~~~ 88 (468)
.. ..+|..|++++|++...
T Consensus 392 ~~l~~~~~L~~L~l~~N~i~~~ 413 (461)
T 1z7x_W 392 ATLLANHSLRELDLSNNCLGDA 413 (461)
T ss_dssp HHHHHCCCCCEEECCSSSCCHH
T ss_pred HHHHhCCCccEEECCCCCCCHH
Confidence 64 46777889999988653
No 403
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.17 E-value=4.1e-07 Score=90.92 Aligned_cols=86 Identities=16% Similarity=0.089 Sum_probs=71.1
Q ss_pred CCCCCcEEEccCCcccccCCcccccC-----CCCCEeeccCcccccc----ccccccCCCCCceecccCcccccccCCc-
Q 012219 2 NCSKLRVLELGNNLLSGSIPSEINKL-----QELNYLNLSHNSINGK----ILSQLGEIPRIDTVDLSMNNLSGSIPES- 71 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g~~p~~~~~l-----~~L~~L~l~~N~l~g~----~p~~~~~l~~L~~l~l~~N~l~g~~p~~- 71 (468)
++++|+.|+|++|.+++..+..+... ++|+.|+|++|.+++. +|..+..+++|+.|+|++|++++..+..
T Consensus 282 ~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l 361 (461)
T 1z7x_W 282 AKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVREL 361 (461)
T ss_dssp HCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHH
T ss_pred hCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHH
Confidence 47899999999999987666555543 7999999999999976 6788889999999999999998643332
Q ss_pred -------CCCccceecccccccc
Q 012219 72 -------VRKVPHLYVYGKNFDV 87 (468)
Q Consensus 72 -------~~~l~~l~~~~n~l~~ 87 (468)
..++..|++++|.+..
T Consensus 362 ~~~l~~~~~~L~~L~L~~n~i~~ 384 (461)
T 1z7x_W 362 CQGLGQPGSVLRVLWLADCDVSD 384 (461)
T ss_dssp HHHHTSTTCCCCEEECTTSCCCH
T ss_pred HHHHcCCCCceEEEECCCCCCCh
Confidence 3478889999998874
No 404
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.10 E-value=6.9e-07 Score=86.59 Aligned_cols=61 Identities=20% Similarity=0.267 Sum_probs=26.6
Q ss_pred CCcEEEccCCcccccCCcccc-----cCCCCCEeeccCccccc----cccccccCCCCCceecccCcccc
Q 012219 5 KLRVLELGNNLLSGSIPSEIN-----KLQELNYLNLSHNSING----KILSQLGEIPRIDTVDLSMNNLS 65 (468)
Q Consensus 5 ~l~~l~l~~N~l~g~~p~~~~-----~l~~L~~L~l~~N~l~g----~~p~~~~~l~~L~~l~l~~N~l~ 65 (468)
+|+.|+|++|+|+..-...++ ..++|+.|+|++|.|+. .++..+..+++|++|+|++|+++
T Consensus 127 ~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~ 196 (372)
T 3un9_A 127 RARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLG 196 (372)
T ss_dssp TEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCH
T ss_pred hccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCC
Confidence 444555555555432222221 23445555555555442 13333344445555555555444
No 405
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=98.01 E-value=3.7e-05 Score=73.34 Aligned_cols=139 Identities=19% Similarity=0.306 Sum_probs=78.0
Q ss_pred eeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhcc-----CCceeeEE-E--EEeeCCEEEEEE
Q 012219 177 CIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIR-----HRNIVKLY-G--FCLHRKCMFLIY 248 (468)
Q Consensus 177 ~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-----h~niv~l~-~--~~~~~~~~~lv~ 248 (468)
.|+.|..+.||+....+| .+++|+..... ..+..|.+++..+. .|.++... | +....+..++++
T Consensus 39 ~l~gG~~n~~~~v~~~~~-~~vlk~~~~~~-------~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~ 110 (346)
T 2q83_A 39 VIQGNQMALVWKVHTDSG-AVCLKRIHRPE-------KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVY 110 (346)
T ss_dssp ECC----CEEEEEEETTE-EEEEEEECSCH-------HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEE
T ss_pred eccccccCcEEEEEeCCC-CEEEEecCCCH-------HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEE
Confidence 455677889999987655 48899887532 12223444444442 34444310 1 112456789999
Q ss_pred EeccCCChh--------------hhhhcCcc----c-------CCCCHHHHH----------------------------
Q 012219 249 EYMEMGSLF--------------CVLRTDEE----A-------VGLDWAKRV---------------------------- 275 (468)
Q Consensus 249 e~~~~gsL~--------------~~l~~~~~----~-------~~l~~~~~~---------------------------- 275 (468)
||++|..+. ..++.... . ..-.|...+
T Consensus 111 ~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 190 (346)
T 2q83_A 111 DWIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQ 190 (346)
T ss_dssp ECCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHH
T ss_pred EeecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHH
Confidence 999986542 11111100 0 011232110
Q ss_pred ---HHHHHHHHHHHHHHh----------cCCCCeEecCCCCCceeeCCCCCeEEeeccccc
Q 012219 276 ---NVVKGMCHALSYLHH----------DCTPPIVHRDISSNNVLLNSELEAFVADFGVAR 323 (468)
Q Consensus 276 ---~i~~~ia~~l~~LH~----------~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~ 323 (468)
.+...+..++.+|+. .....++|+|+++.||+++.++.+.|.||+.+.
T Consensus 191 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 191 EIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 111223345666652 125789999999999999888889999999774
No 406
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=97.98 E-value=1.2e-05 Score=76.49 Aligned_cols=89 Identities=16% Similarity=0.199 Sum_probs=70.7
Q ss_pred CCCCcEEEccCCcccccCCc-ccccCCCCCEeeccCccccccccccccCCCCCc-eecccCcccccccCC-cCCC---cc
Q 012219 3 CSKLRVLELGNNLLSGSIPS-EINKLQELNYLNLSHNSINGKILSQLGEIPRID-TVDLSMNNLSGSIPE-SVRK---VP 76 (468)
Q Consensus 3 l~~l~~l~l~~N~l~g~~p~-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~-~l~l~~N~l~g~~p~-~~~~---l~ 76 (468)
|++|+.|+|++|+++ .||+ .|.+|++|+.|+|++| ++..-+.+|.+|++|+ .|++++ +++ .|++ .|.+ |+
T Consensus 225 ~~~L~~l~L~~n~i~-~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~-~I~~~aF~~c~~L~ 300 (329)
T 3sb4_A 225 MPNLVSLDISKTNAT-TIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVT-AIEFGAFMGCDNLR 300 (329)
T ss_dssp CTTCCEEECTTBCCC-EECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCC-EECTTTTTTCTTEE
T ss_pred cCCCeEEECCCCCcc-eecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cce-EEchhhhhCCccCC
Confidence 789999999999999 6665 6999999999999999 8844456699999999 999999 787 5664 5554 45
Q ss_pred ceecccccccccCCCCCCC
Q 012219 77 HLYVYGKNFDVEIPNTSEN 95 (468)
Q Consensus 77 ~l~~~~n~l~~~~p~~~~~ 95 (468)
.+.+.+|++....+..+..
T Consensus 301 ~l~l~~n~i~~I~~~aF~~ 319 (329)
T 3sb4_A 301 YVLATGDKITTLGDELFGN 319 (329)
T ss_dssp EEEECSSCCCEECTTTTCT
T ss_pred EEEeCCCccCccchhhhcC
Confidence 5677788877665555543
No 407
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.96 E-value=2e-05 Score=77.03 Aligned_cols=78 Identities=12% Similarity=0.074 Sum_probs=48.7
Q ss_pred cceeeeeCCceEEEEEcC-CCCEEEEEEecCcch--hh--hhhHHHHHHHHHHHhhccC--C-ceeeEEEEEeeCCEEEE
Q 012219 175 KYCIGTGGYGSVYRARLP-SGKVVALKKLHRSET--EE--LASLESFGNEARLLSQIRH--R-NIVKLYGFCLHRKCMFL 246 (468)
Q Consensus 175 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~--~~~~~~~~~e~~~l~~l~h--~-niv~l~~~~~~~~~~~l 246 (468)
.+.||.|..+.||++... +++.++||....... .. ......+..|.+++..+.. + .+.+++.+. ....++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d--~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD--TEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE--TTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEc--CCccEE
Confidence 356899999999999754 468899998653221 00 0112345678888887742 3 344566543 334589
Q ss_pred EEEeccCC
Q 012219 247 IYEYMEMG 254 (468)
Q Consensus 247 v~e~~~~g 254 (468)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999763
No 408
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.95 E-value=7.4e-05 Score=70.21 Aligned_cols=138 Identities=20% Similarity=0.214 Sum_probs=91.5
Q ss_pred cceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhcc---CCceeeEEEEEeeCCEEEEEEEec
Q 012219 175 KYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIR---HRNIVKLYGFCLHRKCMFLIYEYM 251 (468)
Q Consensus 175 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~~~~~lv~e~~ 251 (468)
.+.|+.|....+|+... ++..+++|+..... ...|..|.+.|+.+. ...+.++++++...+..++||||+
T Consensus 41 ~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~~------~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l 113 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND-EVQTVFVKINERSY------RSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEAL 113 (312)
T ss_dssp EEEECCSSSSEEEEEES-SSCEEEEEEEEGGG------HHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECC
T ss_pred eEEeCCccceeeeEEEE-CCCeEEEEeCCccc------HHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEec
Confidence 45689999999999987 46788889876431 356788999888884 356788888888888899999999
Q ss_pred cCCChhh-----------hhhcCcc--cC-----------------CCCHHHHH---HHHH----------------HHH
Q 012219 252 EMGSLFC-----------VLRTDEE--AV-----------------GLDWAKRV---NVVK----------------GMC 282 (468)
Q Consensus 252 ~~gsL~~-----------~l~~~~~--~~-----------------~l~~~~~~---~i~~----------------~ia 282 (468)
++..+.. .++.... .. .-+|.... ++.. .+.
T Consensus 114 ~G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~ 193 (312)
T 3jr1_A 114 NKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIV 193 (312)
T ss_dssp CCCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHH
T ss_pred cCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHH
Confidence 9886521 1222111 00 12454322 1111 111
Q ss_pred HH-HHHHH-hcCCCCeEecCCCCCceeeCCCCCeEEeecc
Q 012219 283 HA-LSYLH-HDCTPPIVHRDISSNNVLLNSELEAFVADFG 320 (468)
Q Consensus 283 ~~-l~~LH-~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 320 (468)
.. ...|. ....+.++|+|+.+.|++++.++ +.|.|+.
T Consensus 194 ~~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 194 QIVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 11 12332 12256899999999999999887 7888873
No 409
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=97.84 E-value=3.2e-06 Score=81.89 Aligned_cols=85 Identities=21% Similarity=0.191 Sum_probs=61.6
Q ss_pred CCCCcEEEccCCcccccCCccc-ccCCCCCEeeccCccccccccccc-----cCCCCCceecccCccccc----ccCC--
Q 012219 3 CSKLRVLELGNNLLSGSIPSEI-NKLQELNYLNLSHNSINGKILSQL-----GEIPRIDTVDLSMNNLSG----SIPE-- 70 (468)
Q Consensus 3 l~~l~~l~l~~N~l~g~~p~~~-~~l~~L~~L~l~~N~l~g~~p~~~-----~~l~~L~~l~l~~N~l~g----~~p~-- 70 (468)
.++|+.|+|++|.|+..-...+ ..+.+|+.|+|++|+|+..-...+ ...++|+.|+|++|+|+. .++.
T Consensus 100 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L 179 (372)
T 3un9_A 100 RHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGL 179 (372)
T ss_dssp SSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHH
T ss_pred CCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHH
Confidence 4689999999999875444443 346789999999999985544444 357889999999999873 1322
Q ss_pred -cCCCccceecccccccc
Q 012219 71 -SVRKVPHLYVYGKNFDV 87 (468)
Q Consensus 71 -~~~~l~~l~~~~n~l~~ 87 (468)
...+|+.|++++|.+..
T Consensus 180 ~~~~~L~~L~Ls~N~l~~ 197 (372)
T 3un9_A 180 AGNTSVTHLSLLHTGLGD 197 (372)
T ss_dssp HTCSSCCEEECTTSSCHH
T ss_pred hcCCCcCEEeCCCCCCCc
Confidence 34567888899888753
No 410
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.80 E-value=5.7e-05 Score=70.29 Aligned_cols=79 Identities=18% Similarity=0.160 Sum_probs=56.0
Q ss_pred CccccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccC---CceeeEEEEEeeCCEEEEE
Q 012219 171 DFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRH---RNIVKLYGFCLHRKCMFLI 247 (468)
Q Consensus 171 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h---~niv~l~~~~~~~~~~~lv 247 (468)
...-...+|.|..+.||+.+..||+.+++|+-...... ....|..|.+.|+.+.- -.+.+++++. . .++|
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~---~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~--~--~~lv 88 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPA---LDGLFRAEALGLDWLGRSFGSPVPQVAGWD--D--RTLA 88 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCC---CTTHHHHHHHHHHHHTCSTTCCSCCEEEEE--T--TEEE
T ss_pred CeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcc---hhhHHHHHHHHHHHHHhhCCCCcceEEecc--C--ceEE
Confidence 34456779999999999999999999999987644322 12356789998888742 2344555543 2 3789
Q ss_pred EEeccCCCh
Q 012219 248 YEYMEMGSL 256 (468)
Q Consensus 248 ~e~~~~gsL 256 (468)
|||++++..
T Consensus 89 ~e~l~~~~~ 97 (288)
T 3f7w_A 89 MEWVDERPP 97 (288)
T ss_dssp EECCCCCCC
T ss_pred EEeecccCC
Confidence 999987754
No 411
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=97.79 E-value=3.8e-06 Score=86.73 Aligned_cols=84 Identities=17% Similarity=0.196 Sum_probs=43.8
Q ss_pred CCCCcEEEccC--CcccccCCccccc-CCCCCEeeccCccccc-cccccccCCCCCceecccCcccccc-cCC---cCCC
Q 012219 3 CSKLRVLELGN--NLLSGSIPSEINK-LQELNYLNLSHNSING-KILSQLGEIPRIDTVDLSMNNLSGS-IPE---SVRK 74 (468)
Q Consensus 3 l~~l~~l~l~~--N~l~g~~p~~~~~-l~~L~~L~l~~N~l~g-~~p~~~~~l~~L~~l~l~~N~l~g~-~p~---~~~~ 74 (468)
+++|+.|+|+. |.+++..+..++. +++|++|+|++|++++ .++..+.++++|+.|+|++|.+++. ++. .+.+
T Consensus 435 ~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~ 514 (592)
T 3ogk_B 435 CKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPS 514 (592)
T ss_dssp CTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSS
T ss_pred CCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCc
Confidence 34455555542 1244443434333 5566666666666665 2344455666666666666666533 222 2445
Q ss_pred ccceeccccccc
Q 012219 75 VPHLYVYGKNFD 86 (468)
Q Consensus 75 l~~l~~~~n~l~ 86 (468)
|+.|++++|+++
T Consensus 515 L~~L~ls~n~it 526 (592)
T 3ogk_B 515 LRYLWVQGYRAS 526 (592)
T ss_dssp CCEEEEESCBCC
T ss_pred cCeeECcCCcCC
Confidence 566666666644
No 412
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=97.72 E-value=8.6e-06 Score=70.53 Aligned_cols=86 Identities=14% Similarity=0.179 Sum_probs=61.3
Q ss_pred CCCCCcEEEccCC-ccccc----CCcccccCCCCCEeeccCcccccc----ccccccCCCCCceecccCcccccc----c
Q 012219 2 NCSKLRVLELGNN-LLSGS----IPSEINKLQELNYLNLSHNSINGK----ILSQLGEIPRIDTVDLSMNNLSGS----I 68 (468)
Q Consensus 2 ~l~~l~~l~l~~N-~l~g~----~p~~~~~l~~L~~L~l~~N~l~g~----~p~~~~~l~~L~~l~l~~N~l~g~----~ 68 (468)
+.++|+.|+|++| .|... +...+...++|++|+|++|+|+.. +...+...++|+.|+|++|+++.. +
T Consensus 34 ~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l 113 (185)
T 1io0_A 34 NDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILAL 113 (185)
T ss_dssp TCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHH
T ss_pred cCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHH
Confidence 4678999999998 87632 344566678899999999998743 445566778899999999988742 2
Q ss_pred CCcC---CCccceec--ccccccc
Q 012219 69 PESV---RKVPHLYV--YGKNFDV 87 (468)
Q Consensus 69 p~~~---~~l~~l~~--~~n~l~~ 87 (468)
...+ .+|+.|++ .+|.+..
T Consensus 114 ~~~L~~n~~L~~L~L~~~~N~i~~ 137 (185)
T 1io0_A 114 VEALQSNTSLIELRIDNQSQPLGN 137 (185)
T ss_dssp HHGGGGCSSCCEEECCCCSSCCCH
T ss_pred HHHHHhCCCceEEEecCCCCCCCH
Confidence 3333 35777888 6677643
No 413
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=97.66 E-value=1.3e-05 Score=69.50 Aligned_cols=84 Identities=11% Similarity=0.114 Sum_probs=57.1
Q ss_pred CCCCCcEEEccCCccccc----CCcccccCCCCCEeeccCcccccc----ccccccCCCCCceecc--cCcccccc----
Q 012219 2 NCSKLRVLELGNNLLSGS----IPSEINKLQELNYLNLSHNSINGK----ILSQLGEIPRIDTVDL--SMNNLSGS---- 67 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~g~----~p~~~~~l~~L~~l~l--~~N~l~g~---- 67 (468)
+.++|++|+|++|+|... +...+...++|++|+|++|.|+.. +...+...++|+.|+| ++|.++..
T Consensus 63 ~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~ 142 (185)
T 1io0_A 63 TNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEME 142 (185)
T ss_dssp TCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHH
T ss_pred hCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHH
Confidence 356788888888888642 334455567888888888888753 5566777788888888 77888642
Q ss_pred cCCc---CCCccceecccccc
Q 012219 68 IPES---VRKVPHLYVYGKNF 85 (468)
Q Consensus 68 ~p~~---~~~l~~l~~~~n~l 85 (468)
+... -.+++.|++++|.+
T Consensus 143 l~~~L~~n~~L~~L~L~~n~i 163 (185)
T 1io0_A 143 IANMLEKNTTLLKFGYHFTQQ 163 (185)
T ss_dssp HHHHHHHCSSCCEEECCCSSH
T ss_pred HHHHHHhCCCcCEEeccCCCC
Confidence 1122 24566677766654
No 414
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.66 E-value=5.5e-05 Score=61.15 Aligned_cols=57 Identities=21% Similarity=0.332 Sum_probs=46.1
Q ss_pred cEEEccCCccc-ccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccc
Q 012219 7 RVLELGNNLLS-GSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLS 65 (468)
Q Consensus 7 ~~l~l~~N~l~-g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~ 65 (468)
..++.++++|+ ..+|..+. .+|+.|+|++|+|+..-+..|..+++|+.|+|++|.+.
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CEEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 47889999996 57786655 46999999999999444455889999999999999775
No 415
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=97.63 E-value=2.2e-05 Score=80.91 Aligned_cols=80 Identities=10% Similarity=0.118 Sum_probs=60.1
Q ss_pred CCCCCcEEEccCCccccc----CCcccccCCCCCEeeccCcccc----ccccccccCCCCCceecccCcccccccCCc--
Q 012219 2 NCSKLRVLELGNNLLSGS----IPSEINKLQELNYLNLSHNSIN----GKILSQLGEIPRIDTVDLSMNNLSGSIPES-- 71 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~----g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~-- 71 (468)
+|++|++|+|++|.+++. ++..+.++++|+.|+|++|.++ +.++..+.++++|+.|+|++|.+++ +|..
T Consensus 162 ~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~ 240 (592)
T 3ogk_B 162 HCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFK 240 (592)
T ss_dssp HCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHH
T ss_pred hCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHh
Confidence 478899999999988766 4445677888999999999887 4566667788999999999998884 6653
Q ss_pred -CCCccceeccc
Q 012219 72 -VRKVPHLYVYG 82 (468)
Q Consensus 72 -~~~l~~l~~~~ 82 (468)
+.+|+.|.+..
T Consensus 241 ~~~~L~~L~l~~ 252 (592)
T 3ogk_B 241 AAANLEEFCGGS 252 (592)
T ss_dssp HCTTCCEEEECB
T ss_pred hhhHHHhhcccc
Confidence 34555566654
No 416
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.62 E-value=0.00029 Score=69.36 Aligned_cols=78 Identities=12% Similarity=0.075 Sum_probs=47.9
Q ss_pred CCCeEecCCCCCceeeCCCCCeEEeeccccccccCCCCCceeccc--cccccccccccCC---CCCccchhhHHHHHHHH
Q 012219 293 TPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDSSNRTLLAG--TYGYIAPELAYTM---VVTEKCDVYSFGVVALE 367 (468)
Q Consensus 293 ~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g--~~~y~aPE~~~~~---~~~~~~Dv~s~Gvil~e 367 (468)
...++|||++|.||+++.++ +++.||+.+..-... ........ ...|++|+..... ......++.+....+|+
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~-~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMG-FDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWN 308 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHH-HHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchH-HHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHH
Confidence 67899999999999999876 999999988653210 00000000 1346666654311 11223455677777787
Q ss_pred HHhCC
Q 012219 368 VLMGK 372 (468)
Q Consensus 368 l~tg~ 372 (468)
.++++
T Consensus 309 ~y~~~ 313 (420)
T 2pyw_A 309 LFNKR 313 (420)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77654
No 417
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.55 E-value=1e-05 Score=83.53 Aligned_cols=83 Identities=14% Similarity=0.232 Sum_probs=50.0
Q ss_pred CCCCCcEEEcc--C----Ccccc-----cCCcccccCCCCCEeeccCccccccccccccC-CCCCceecccCcccccccC
Q 012219 2 NCSKLRVLELG--N----NLLSG-----SIPSEINKLQELNYLNLSHNSINGKILSQLGE-IPRIDTVDLSMNNLSGSIP 69 (468)
Q Consensus 2 ~l~~l~~l~l~--~----N~l~g-----~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~-l~~L~~l~l~~N~l~g~~p 69 (468)
++++|+.|+|+ + |++++ .++.-+.++++|+.|+|++ .+++..+..++. +++|+.|+|++|.+++..+
T Consensus 395 ~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~ 473 (594)
T 2p1m_B 395 NRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGM 473 (594)
T ss_dssp HCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHH
T ss_pred hCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHH
Confidence 36777777777 4 55551 1122255667777777766 566555555554 6777777777777654333
Q ss_pred C----cCCCccceecccccc
Q 012219 70 E----SVRKVPHLYVYGKNF 85 (468)
Q Consensus 70 ~----~~~~l~~l~~~~n~l 85 (468)
. .+.+|+.|++++|.+
T Consensus 474 ~~l~~~~~~L~~L~L~~n~~ 493 (594)
T 2p1m_B 474 HHVLSGCDSLRKLEIRDCPF 493 (594)
T ss_dssp HHHHHHCTTCCEEEEESCSC
T ss_pred HHHHhcCCCcCEEECcCCCC
Confidence 2 345666667776665
No 418
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=97.53 E-value=9.1e-05 Score=70.33 Aligned_cols=73 Identities=14% Similarity=0.108 Sum_probs=61.4
Q ss_pred CCCCCcEEEccCCcccccCC-cccccCCCCC-EeeccCccccccccccccCCCCCceecccCcccccccCC-cCCCccce
Q 012219 2 NCSKLRVLELGNNLLSGSIP-SEINKLQELN-YLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPE-SVRKVPHL 78 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g~~p-~~~~~l~~L~-~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~-~~~~l~~l 78 (468)
+|++|+.|+|++| ++ .|+ ..|.+|++|+ .|+|++ +++..-+.+|.+|++|+.|++++|+++ .|+. .|.+++.|
T Consensus 248 ~~~~L~~l~l~~n-i~-~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~-~I~~~aF~~~~~L 323 (329)
T 3sb4_A 248 QKKYLLKIKLPHN-LK-TIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKIT-TLGDELFGNGVPS 323 (329)
T ss_dssp TCTTCCEEECCTT-CC-EECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCC-EECTTTTCTTCCC
T ss_pred CCCCCCEEECCcc-cc-eehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccC-ccchhhhcCCcch
Confidence 6889999999999 87 555 5799999999 999999 788455678999999999999999999 6665 66666554
No 419
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.48 E-value=2.1e-05 Score=81.02 Aligned_cols=82 Identities=12% Similarity=0.180 Sum_probs=55.2
Q ss_pred CCCCcEEEccCCcccccCCcccc-cCCCCCEeeccCc-ccccc-ccccccCCCCCceecccCccccccc-------CCcC
Q 012219 3 CSKLRVLELGNNLLSGSIPSEIN-KLQELNYLNLSHN-SINGK-ILSQLGEIPRIDTVDLSMNNLSGSI-------PESV 72 (468)
Q Consensus 3 l~~l~~l~l~~N~l~g~~p~~~~-~l~~L~~L~l~~N-~l~g~-~p~~~~~l~~L~~l~l~~N~l~g~~-------p~~~ 72 (468)
+++|+.|+|++|.+++..+..+. ++++|+.|+|++| .+++. ++..+.++++|+.|+|++|.+++.. +..+
T Consensus 104 ~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~ 183 (594)
T 2p1m_B 104 YTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTY 183 (594)
T ss_dssp CTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTC
T ss_pred CCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcC
Confidence 56788888888887777666665 6778888888877 45533 4444557788888888888766432 2234
Q ss_pred CCccceeccccc
Q 012219 73 RKVPHLYVYGKN 84 (468)
Q Consensus 73 ~~l~~l~~~~n~ 84 (468)
.+|+.|+++++.
T Consensus 184 ~~L~~L~l~~~~ 195 (594)
T 2p1m_B 184 TSLVSLNISCLA 195 (594)
T ss_dssp CCCCEEECTTCC
T ss_pred CcCcEEEecccC
Confidence 466667776654
No 420
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.43 E-value=0.00048 Score=64.96 Aligned_cols=158 Identities=13% Similarity=0.101 Sum_probs=86.8
Q ss_pred cCHHHHHHHhhCcccc-----ceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCc--ee
Q 012219 160 ITFQDMIEATEDFHIK-----YCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRN--IV 232 (468)
Q Consensus 160 ~~~~~~~~~~~~~~~~-----~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv 232 (468)
++.+++......|.+. +.|+.|....+|+....+| .+++|........ ..+..|.+++..+.... +.
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~~~-----~~l~~e~~~l~~L~~~g~~vP 80 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRVEK-----NDLPFFLGLMQHLAAKGLSCP 80 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC---C-----CHHHHHHHHHHHHHHTTCCCC
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCCCH-----HHHHHHHHHHHHHHHCCCCCC
Confidence 4556666666667652 3466688889999987666 5788888753111 23445677766664212 22
Q ss_pred eEEEE------EeeCCEEEEEEEeccCCChhh--------------hhhcC----ccc----CC-CCHHHHHH-------
Q 012219 233 KLYGF------CLHRKCMFLIYEYMEMGSLFC--------------VLRTD----EEA----VG-LDWAKRVN------- 276 (468)
Q Consensus 233 ~l~~~------~~~~~~~~lv~e~~~~gsL~~--------------~l~~~----~~~----~~-l~~~~~~~------- 276 (468)
+++.. ....+..+++++|++|..+.. .++.. ... .. ..|...+.
T Consensus 81 ~~~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 160 (322)
T 2ppq_A 81 LPLPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERAD 160 (322)
T ss_dssp CBCCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGG
T ss_pred cccCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHH
Confidence 22211 122456789999999865421 01110 000 00 11322111
Q ss_pred -----HHHHHHHHHHHHHhc----CCCCeEecCCCCCceeeCCCCCeEEeeccccc
Q 012219 277 -----VVKGMCHALSYLHHD----CTPPIVHRDISSNNVLLNSELEAFVADFGVAR 323 (468)
Q Consensus 277 -----i~~~ia~~l~~LH~~----~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~ 323 (468)
+...+...+.+++.. ...+++|+|+.+.||+++++..+.|.||+.+.
T Consensus 161 ~~~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 161 EVEKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp GTSTTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhhhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 001234455555532 14579999999999999987666799998774
No 421
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=97.42 E-value=2.7e-05 Score=74.85 Aligned_cols=86 Identities=12% Similarity=0.217 Sum_probs=61.7
Q ss_pred CCCCCcEEEccC--Cccccc-----CCccc--ccCCCCCEeeccCcccccccccccc---CCCCCceecccCcccccc--
Q 012219 2 NCSKLRVLELGN--NLLSGS-----IPSEI--NKLQELNYLNLSHNSINGKILSQLG---EIPRIDTVDLSMNNLSGS-- 67 (468)
Q Consensus 2 ~l~~l~~l~l~~--N~l~g~-----~p~~~--~~l~~L~~L~l~~N~l~g~~p~~~~---~l~~L~~l~l~~N~l~g~-- 67 (468)
++++|+.|+|+. |...|. +...+ ..+++|++|+|++|.+++..+..+. .+++|+.|+|+.|.+++.
T Consensus 217 ~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~ 296 (362)
T 2ra8_A 217 DLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGA 296 (362)
T ss_dssp BCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHH
T ss_pred cCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHH
Confidence 689999999963 222111 11222 3578999999999999866555543 588999999999999863
Q ss_pred --cCCc---CCCccceecccccccc
Q 012219 68 --IPES---VRKVPHLYVYGKNFDV 87 (468)
Q Consensus 68 --~p~~---~~~l~~l~~~~n~l~~ 87 (468)
++.. +.+|+.|++++|.++.
T Consensus 297 ~~L~~~L~~l~~L~~L~L~~n~i~d 321 (362)
T 2ra8_A 297 RLLLDHVDKIKHLKFINMKYNYLSD 321 (362)
T ss_dssp HHHHTTHHHHTTCSEEECCSBBCCH
T ss_pred HHHHhhcccCCcceEEECCCCcCCH
Confidence 4443 5678888998887654
No 422
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.38 E-value=0.00073 Score=64.09 Aligned_cols=141 Identities=21% Similarity=0.183 Sum_probs=72.5
Q ss_pred eeeeeCCce-EEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccC--CceeeEEEEEeeCCEEEEEEEeccC
Q 012219 177 CIGTGGYGS-VYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRH--RNIVKLYGFCLHRKCMFLIYEYMEM 253 (468)
Q Consensus 177 ~lg~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~l~~~~~~~~~~~lv~e~~~~ 253 (468)
.|+.|.... +|+....++..+++|....... ..+..|++++..+.. -.+.+++.+....+ +++||++.+
T Consensus 25 ~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~------~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~ 96 (333)
T 3csv_A 25 PLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG------GDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGD 96 (333)
T ss_dssp C--------CCEEEECTTCCEEEEEECCTTTT------CCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCS
T ss_pred ECCCCCCCceEEEEEcCCCCeEEEEECCCCCC------ccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCC
Confidence 455554444 6787765467777776543321 122345666665532 23455666654444 689999977
Q ss_pred CChhhhhhcCc---------------------c--cCCCCHHHHH-------H-------------HHHHHHHHHHHHH-
Q 012219 254 GSLFCVLRTDE---------------------E--AVGLDWAKRV-------N-------------VVKGMCHALSYLH- 289 (468)
Q Consensus 254 gsL~~~l~~~~---------------------~--~~~l~~~~~~-------~-------------i~~~ia~~l~~LH- 289 (468)
..+.+.+.... . ...++..... . ....+...+..+.
T Consensus 97 ~~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~ 176 (333)
T 3csv_A 97 ALFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILS 176 (333)
T ss_dssp CBHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHH
T ss_pred cchHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHH
Confidence 66654332110 0 0011111100 0 0001112222221
Q ss_pred --hcCCCCeEecCCCCCceeeCCC----CCeEEeeccccccc
Q 012219 290 --HDCTPPIVHRDISSNNVLLNSE----LEAFVADFGVARLL 325 (468)
Q Consensus 290 --~~~~~~ivH~dlk~~NIll~~~----~~~kl~Dfg~~~~~ 325 (468)
......++|||+.+.||+++.+ ..+.|.||+.+..-
T Consensus 177 ~~~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 177 AQLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp HHCCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred hcccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 1125689999999999999875 67899999988653
No 423
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.34 E-value=0.0027 Score=59.95 Aligned_cols=158 Identities=12% Similarity=0.123 Sum_probs=87.2
Q ss_pred cCHHHHHHHhhCccc-----cceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCC--cee
Q 012219 160 ITFQDMIEATEDFHI-----KYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHR--NIV 232 (468)
Q Consensus 160 ~~~~~~~~~~~~~~~-----~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~--niv 232 (468)
++.+++....+.|.+ ...++ |....||+....+|+.+++|........ ...+..|..++..+... .+.
T Consensus 11 l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~~----~~~~~~E~~~~~~L~~~g~~vp 85 (328)
T 1zyl_A 11 LHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPERWT----ADQILEEHQFALQLVNDEVPVA 85 (328)
T ss_dssp CCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTTSC----HHHHHHHHHHHHHHHHTTCSBC
T ss_pred CCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCCCCEEEEEEcCCCCCC----HHHHHHHHHHHHHHHHcCCeec
Confidence 344555555444433 23466 8888999998777878999998643211 23455677777766421 233
Q ss_pred eEEEE-----EeeCCEEEEEEEeccCCChhh----h----------hhcC----c--ccCCCCHHHH----HHH------
Q 012219 233 KLYGF-----CLHRKCMFLIYEYMEMGSLFC----V----------LRTD----E--EAVGLDWAKR----VNV------ 277 (468)
Q Consensus 233 ~l~~~-----~~~~~~~~lv~e~~~~gsL~~----~----------l~~~----~--~~~~l~~~~~----~~i------ 277 (468)
+++.. ....+..+++++|++|..+.. . ++.. . .....++... ..+
T Consensus 86 ~~~~~~g~~~~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 165 (328)
T 1zyl_A 86 APVAFNGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATL 165 (328)
T ss_dssp CCCCBTTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSS
T ss_pred ceeecCCcEEEEECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCc
Confidence 33332 122456788999998754321 0 1110 0 0011222111 001
Q ss_pred ---------HHHHHHHHHHHHhc----CCCCeEecCCCCCceeeCCCCCeEEeecccccc
Q 012219 278 ---------VKGMCHALSYLHHD----CTPPIVHRDISSNNVLLNSELEAFVADFGVARL 324 (468)
Q Consensus 278 ---------~~~ia~~l~~LH~~----~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~ 324 (468)
...+...+..+... ....++|||+++.||+++ + .+.+.||+.+..
T Consensus 166 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 166 IPSGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp SCTTTHHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 01111223333211 245689999999999999 4 889999987754
No 424
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.27 E-value=0.00059 Score=67.22 Aligned_cols=72 Identities=24% Similarity=0.294 Sum_probs=48.5
Q ss_pred ceeeeeCCceEEEEEcCC--------CCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCce-eeEEEEEeeCCEEEE
Q 012219 176 YCIGTGGYGSVYRARLPS--------GKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNI-VKLYGFCLHRKCMFL 246 (468)
Q Consensus 176 ~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~l 246 (468)
+.|+.|....+|++...+ ++.+++|+...... ...+.+|..++..+...++ .++++.+.. .+
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~~-----~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~ 149 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPET-----ESHLVAESVIFTLLSERHLGPKLYGIFSG----GR 149 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCC-----HHHHHHHHHHHHHHHHTTSSSCEEEEETT----EE
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCCc-----HHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CE
Confidence 457888889999998753 57899998854221 1234478888888753333 566766542 28
Q ss_pred EEEeccCCCh
Q 012219 247 IYEYMEMGSL 256 (468)
Q Consensus 247 v~e~~~~gsL 256 (468)
|+||++|.++
T Consensus 150 v~e~l~G~~l 159 (429)
T 1nw1_A 150 LEEYIPSRPL 159 (429)
T ss_dssp EECCCCEEEC
T ss_pred EEEEeCCccc
Confidence 9999986444
No 425
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=97.23 E-value=0.001 Score=64.16 Aligned_cols=141 Identities=19% Similarity=0.232 Sum_probs=80.9
Q ss_pred ceeeeeCCceEEEEEcC--------CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhcc-CCceeeEEEEEeeCCEEEE
Q 012219 176 YCIGTGGYGSVYRARLP--------SGKVVALKKLHRSETEELASLESFGNEARLLSQIR-HRNIVKLYGFCLHRKCMFL 246 (468)
Q Consensus 176 ~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~l 246 (468)
+.|..|-...+|++... +++.+++|+.... . .....+.+|.++++.+. +.-..++++++.. .+
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~---~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~ 127 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-L---QGVDSLVLESVMFAILAERSLGPQLYGVFPE----GR 127 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC-------CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-c---chHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----cc
Confidence 45777888899999875 3578999986321 1 12345568999888874 3223556666643 28
Q ss_pred EEEeccCCChhhh-----------------hhcCcc--cCCCC--HHHHHHHHHHHHH-------------------HHH
Q 012219 247 IYEYMEMGSLFCV-----------------LRTDEE--AVGLD--WAKRVNVVKGMCH-------------------ALS 286 (468)
Q Consensus 247 v~e~~~~gsL~~~-----------------l~~~~~--~~~l~--~~~~~~i~~~ia~-------------------~l~ 286 (468)
|+||++|.++..- ++.... ..... |.+..++..++.. .+.
T Consensus 128 v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 207 (379)
T 3feg_A 128 LEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMG 207 (379)
T ss_dssp EEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHH
T ss_pred EEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHH
Confidence 9999998665311 111110 11122 3344444433321 222
Q ss_pred H----HHh-cCCCCeEecCCCCCceeeCCC----CCeEEeecccccc
Q 012219 287 Y----LHH-DCTPPIVHRDISSNNVLLNSE----LEAFVADFGVARL 324 (468)
Q Consensus 287 ~----LH~-~~~~~ivH~dlk~~NIll~~~----~~~kl~Dfg~~~~ 324 (468)
+ |.. .....++|+|+.+.||+++.+ +.+.+.||..+..
T Consensus 208 ~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 208 NLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 3 321 123479999999999999876 7889999987753
No 426
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=97.16 E-value=0.00017 Score=69.33 Aligned_cols=85 Identities=14% Similarity=0.146 Sum_probs=60.4
Q ss_pred CCCCcEEEccCCcccccCCcccc--cCCCCCEeeccC--cccccc-----ccccc--cCCCCCceecccCcccccccCC-
Q 012219 3 CSKLRVLELGNNLLSGSIPSEIN--KLQELNYLNLSH--NSINGK-----ILSQL--GEIPRIDTVDLSMNNLSGSIPE- 70 (468)
Q Consensus 3 l~~l~~l~l~~N~l~g~~p~~~~--~l~~L~~L~l~~--N~l~g~-----~p~~~--~~l~~L~~l~l~~N~l~g~~p~- 70 (468)
+++|+.|+|..|.++...-..++ .+++|+.|+|+. |...|. +...+ ..+++|+.|+|++|.+++..+.
T Consensus 192 ~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~ 271 (362)
T 2ra8_A 192 RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEM 271 (362)
T ss_dssp CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHH
T ss_pred CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHH
Confidence 67999999999988754444555 789999999864 332222 11123 3579999999999998753321
Q ss_pred -----cCCCccceecccccccc
Q 012219 71 -----SVRKVPHLYVYGKNFDV 87 (468)
Q Consensus 71 -----~~~~l~~l~~~~n~l~~ 87 (468)
.+.+|+.|+++.|.+..
T Consensus 272 la~a~~~~~L~~LdLs~n~L~d 293 (362)
T 2ra8_A 272 FLESDILPQLETMDISAGVLTD 293 (362)
T ss_dssp HHHCSSGGGCSEEECCSSCCBH
T ss_pred HHhCccCCCCCEEECCCCCCCh
Confidence 35678889999888765
No 427
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.11 E-value=0.0012 Score=61.52 Aligned_cols=71 Identities=14% Similarity=0.092 Sum_probs=43.1
Q ss_pred cceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCce-eeEEEEEeeCCEEEEEEEec-c
Q 012219 175 KYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNI-VKLYGFCLHRKCMFLIYEYM-E 252 (468)
Q Consensus 175 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~-~ 252 (468)
.+.|+.|....+|+. ..+++|+....... . ....+|...++.+....+ .++++++.+ .-++++||+ +
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~-~---~~r~~E~~~l~~l~~~g~~P~~~~~~~~--~~~~v~e~i~~ 91 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEE-Y---INRANEAVAAREAAKAGVSPEVLHVDPA--TGVMVTRYIAG 91 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC-----C---CCHHHHHHHHHHHHHTTSSCCEEEECTT--TCCEEEECCTT
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccc-e---eCHHHHHHHHHHHHHcCCCCceEEEECC--CCEEEEeecCC
Confidence 567999999999999 45888887643211 0 112357777776642222 355555433 346899999 6
Q ss_pred CCCh
Q 012219 253 MGSL 256 (468)
Q Consensus 253 ~gsL 256 (468)
+.++
T Consensus 92 g~~l 95 (301)
T 3dxq_A 92 AQTM 95 (301)
T ss_dssp CEEC
T ss_pred CccC
Confidence 5444
No 428
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.97 E-value=0.0062 Score=53.03 Aligned_cols=102 Identities=20% Similarity=0.144 Sum_probs=64.8
Q ss_pred ChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCCCCcee
Q 012219 255 SLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDSSNRTL 334 (468)
Q Consensus 255 sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~ 334 (468)
||.+.|...+. ++++.++|.++.|.+.+|.-+-. ...-..+=+.|..|++..+|.|...+ +.+.
T Consensus 34 SL~eIL~~~~~--PlsEEqaWALc~Qc~~~L~~~~~--~~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~----------- 97 (229)
T 2yle_A 34 SLEEILRLYNQ--PINEEQAWAVCYQCCGSLRAAAR--RRQPRHRVRSAAQIRVWRDGAVTLAP-AADD----------- 97 (229)
T ss_dssp EHHHHHHHHTS--CCCHHHHHHHHHHHHHHHHHHHH--TTCCCCCCCSGGGEEEETTSCEEECC-C--------------
T ss_pred cHHHHHHHcCC--CcCHHHHHHHHHHHHHHHHhhhh--cccCCceecCCcceEEecCCceeccc-cccc-----------
Confidence 68888876543 49999999999999999876621 11101222346889999999987653 1110
Q ss_pred ccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCC
Q 012219 335 LAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHP 374 (468)
Q Consensus 335 ~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p 374 (468)
.....+.|||... ...+.+.-|||+|+++|.-+--..|
T Consensus 98 -~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 98 -AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp ----------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred -ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 1223467888763 4556788999999999998863333
No 429
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=96.89 E-value=0.0023 Score=62.41 Aligned_cols=83 Identities=14% Similarity=0.158 Sum_probs=46.6
Q ss_pred CCCCCcEEEccCCccc-----ccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCC-cCC--
Q 012219 2 NCSKLRVLELGNNLLS-----GSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPE-SVR-- 73 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~-----g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~-~~~-- 73 (468)
+|++|+.++|++|.+. ..-+..|.+|++|+.++|. |+++-.-...|.+|++|+.|+|.+| ++ .|+. .|.
T Consensus 269 ~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~-~I~~~aF~~~ 345 (401)
T 4fdw_A 269 YCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VT-QINFSAFNNT 345 (401)
T ss_dssp TCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CC-EECTTSSSSS
T ss_pred CCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-cc-EEcHHhCCCC
Confidence 4566777776666554 2223456667777777776 3365233345667777777777444 54 4443 232
Q ss_pred Cccceecccccccc
Q 012219 74 KVPHLYVYGKNFDV 87 (468)
Q Consensus 74 ~l~~l~~~~n~l~~ 87 (468)
+|+.+.+.+|.+..
T Consensus 346 ~L~~l~l~~n~~~~ 359 (401)
T 4fdw_A 346 GIKEVKVEGTTPPQ 359 (401)
T ss_dssp CCCEEEECCSSCCB
T ss_pred CCCEEEEcCCCCcc
Confidence 44555666665443
No 430
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.86 E-value=0.0016 Score=62.77 Aligned_cols=73 Identities=15% Similarity=0.077 Sum_probs=43.0
Q ss_pred ceeeeeCCceEEEEEcCC---------CCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCc-eeeEEEEEeeCCEEE
Q 012219 176 YCIGTGGYGSVYRARLPS---------GKVVALKKLHRSETEELASLESFGNEARLLSQIRHRN-IVKLYGFCLHRKCMF 245 (468)
Q Consensus 176 ~~lg~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~l~~~~~~~~~~~ 245 (468)
..++.|....+|+....+ ++.+++|+....... ......|.++++.+...+ ..++++.. .+ +
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~----~~~~~~E~~~l~~L~~~g~~P~~~~~~--~~--~ 110 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDE----LYNTISEFEVYKTMSKYKIAPQLLNTF--NG--G 110 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGG----TSCHHHHHHHHHHHHHTTSSCCEEEEE--TT--E
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccc----eecHHHHHHHHHHHHhcCCCCceEEec--CC--c
Confidence 457778888999998654 268888887543211 112346777777775333 33566544 22 6
Q ss_pred EEEEeccCCCh
Q 012219 246 LIYEYMEMGSL 256 (468)
Q Consensus 246 lv~e~~~~gsL 256 (468)
+||||++|..+
T Consensus 111 ~v~e~i~G~~l 121 (369)
T 3c5i_A 111 RIEEWLYGDPL 121 (369)
T ss_dssp EEEECCCSEEC
T ss_pred EEEEEecCCcC
Confidence 89999987543
No 431
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.76 E-value=0.0048 Score=61.05 Aligned_cols=73 Identities=19% Similarity=0.173 Sum_probs=46.3
Q ss_pred ceeeeeCCceEEEEEcCC-CCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCce-eeEEEEEeeCCEEEEEEEeccC
Q 012219 176 YCIGTGGYGSVYRARLPS-GKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNI-VKLYGFCLHRKCMFLIYEYMEM 253 (468)
Q Consensus 176 ~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~~~ 253 (468)
+.|+.|-...+|++...+ +..+++|+....... .-.-.+|..++..+...++ .++++++. + .+|+||++|
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~----~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G 185 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTDE----IINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDG 185 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-CCS----CSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCS
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCChhh----hcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCC
Confidence 468888889999998765 477888887432211 0011378888888864444 46677663 2 249999987
Q ss_pred CCh
Q 012219 254 GSL 256 (468)
Q Consensus 254 gsL 256 (468)
.++
T Consensus 186 ~~l 188 (458)
T 2qg7_A 186 YAL 188 (458)
T ss_dssp EEC
T ss_pred ccC
Confidence 554
No 432
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=96.75 E-value=0.0005 Score=58.26 Aligned_cols=78 Identities=12% Similarity=0.234 Sum_probs=56.7
Q ss_pred CCcEEEccCCcccccCCcccccCCCCCEeeccCcc-ccccccccccCC----CCCceecccCcc-ccc----ccCCcCCC
Q 012219 5 KLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNS-INGKILSQLGEI----PRIDTVDLSMNN-LSG----SIPESVRK 74 (468)
Q Consensus 5 ~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~-l~g~~p~~~~~l----~~L~~l~l~~N~-l~g----~~p~~~~~ 74 (468)
+|+.||||++.++..--..+.+|++|+.|+|+++. +|..-=..++.+ ++|+.|+|+++. +|. .+ ..+.+
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L-~~~~~ 140 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIAL-HHFRN 140 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHG-GGCTT
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHH-hcCCC
Confidence 48999999999875544567889999999999985 775544456664 479999999974 652 12 14566
Q ss_pred ccceecccc
Q 012219 75 VPHLYVYGK 83 (468)
Q Consensus 75 l~~l~~~~n 83 (468)
|+.|++++.
T Consensus 141 L~~L~L~~c 149 (176)
T 3e4g_A 141 LKYLFLSDL 149 (176)
T ss_dssp CCEEEEESC
T ss_pred CCEEECCCC
Confidence 777777653
No 433
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.66 E-value=0.0072 Score=57.36 Aligned_cols=32 Identities=28% Similarity=0.468 Sum_probs=28.0
Q ss_pred CCCeEecCCCCCceeeCCCCCeEEeecccccc
Q 012219 293 TPPIVHRDISSNNVLLNSELEAFVADFGVARL 324 (468)
Q Consensus 293 ~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~ 324 (468)
...++|+|+.+.||+++.++.+.+.||+.+..
T Consensus 205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp GCEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred CceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 45799999999999999888899999987754
No 434
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.57 E-value=0.0019 Score=51.91 Aligned_cols=36 Identities=25% Similarity=0.326 Sum_probs=32.3
Q ss_pred CCcEEEccCCcccccCCc-ccccCCCCCEeeccCcccc
Q 012219 5 KLRVLELGNNLLSGSIPS-EINKLQELNYLNLSHNSIN 41 (468)
Q Consensus 5 ~l~~l~l~~N~l~g~~p~-~~~~l~~L~~L~l~~N~l~ 41 (468)
+|+.|+|++|+|+ .+|. .|..+++|+.|+|++|.+.
T Consensus 32 ~l~~L~Ls~N~l~-~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 32 DTTELVLTGNNLT-ALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TCSEEECTTSCCS-SCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CCCEEECCCCcCC-ccChhhhhhccccCEEEecCCCee
Confidence 7999999999999 6665 5889999999999999885
No 435
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=96.27 E-value=0.015 Score=56.21 Aligned_cols=144 Identities=17% Similarity=0.176 Sum_probs=80.8
Q ss_pred ceeeeeCCceEEEEEcCC--------CCEEEEEEecCcchh-----------hhh----hHHHHHHHHHHHhhcc-CCce
Q 012219 176 YCIGTGGYGSVYRARLPS--------GKVVALKKLHRSETE-----------ELA----SLESFGNEARLLSQIR-HRNI 231 (468)
Q Consensus 176 ~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~-----------~~~----~~~~~~~e~~~l~~l~-h~ni 231 (468)
+.|..|-...+|++..++ .+.+.+++.-..... +.. ..+....|..+++.+. +.-.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 456667788899998754 367888886432110 000 0112335888888775 3334
Q ss_pred eeEEEEEeeCCEEEEEEEeccCCChhh--h---------------hhcCc--ccCCCC--HHHHHHHHHHHH--------
Q 012219 232 VKLYGFCLHRKCMFLIYEYMEMGSLFC--V---------------LRTDE--EAVGLD--WAKRVNVVKGMC-------- 282 (468)
Q Consensus 232 v~l~~~~~~~~~~~lv~e~~~~gsL~~--~---------------l~~~~--~~~~l~--~~~~~~i~~~ia-------- 282 (468)
.++++++.. . +|+||+++-+|.. + ++... -..... |....++..++.
T Consensus 138 Pkl~~~~~~--G--~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQ--G--RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETT--E--EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCC--C--eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 567776643 2 8999999765521 1 11111 011122 223333332221
Q ss_pred --------------HHH----HHHHh-cCCCCeEecCCCCCceeeCCC------CCeEEeeccccc
Q 012219 283 --------------HAL----SYLHH-DCTPPIVHRDISSNNVLLNSE------LEAFVADFGVAR 323 (468)
Q Consensus 283 --------------~~l----~~LH~-~~~~~ivH~dlk~~NIll~~~------~~~kl~Dfg~~~ 323 (468)
.-+ .+|.. .....++|+|+.+.||+++.+ +.+.+.||..+.
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 112 22322 124468999999999999887 789999998774
No 436
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=95.88 E-value=0.0018 Score=54.79 Aligned_cols=62 Identities=10% Similarity=0.089 Sum_probs=48.6
Q ss_pred CCCCCcEEEccCCc-ccccCCcccccC----CCCCEeeccCcc-ccccccccccCCCCCceecccCcc
Q 012219 2 NCSKLRVLELGNNL-LSGSIPSEINKL----QELNYLNLSHNS-INGKILSQLGEIPRIDTVDLSMNN 63 (468)
Q Consensus 2 ~l~~l~~l~l~~N~-l~g~~p~~~~~l----~~L~~L~l~~N~-l~g~~p~~~~~l~~L~~l~l~~N~ 63 (468)
+|++|+.|+|+++. ++..-=..++.+ ++|++|+|++|. +|..--..+.++++|+.|+|++..
T Consensus 83 ~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L~~L~L~~c~ 150 (176)
T 3e4g_A 83 GLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNLKYLFLSDLP 150 (176)
T ss_dssp TCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTCCEEEEESCT
T ss_pred CCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCCCEEECCCCC
Confidence 68999999999995 764333345554 379999999985 886544568899999999999875
No 437
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=95.52 E-value=0.0045 Score=53.41 Aligned_cols=81 Identities=12% Similarity=0.245 Sum_probs=55.8
Q ss_pred CCCCcEEEccCC-cccc----cCCcccccCCCCCEeeccCcccccc----ccccccCCCCCceecccCcccccc----cC
Q 012219 3 CSKLRVLELGNN-LLSG----SIPSEINKLQELNYLNLSHNSINGK----ILSQLGEIPRIDTVDLSMNNLSGS----IP 69 (468)
Q Consensus 3 l~~l~~l~l~~N-~l~g----~~p~~~~~l~~L~~L~l~~N~l~g~----~p~~~~~l~~L~~l~l~~N~l~g~----~p 69 (468)
-+.|+.|+|++| +|.. .+-..+..-+.|+.|+|++|+|... |-..+..-+.|+.|+|++|+|+.. +-
T Consensus 40 n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala 119 (197)
T 1pgv_A 40 DTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLL 119 (197)
T ss_dssp CSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHH
T ss_pred CCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHH
Confidence 467999999986 7752 2334566678999999999999743 344555668899999999999732 11
Q ss_pred CcC---CCccceecccc
Q 012219 70 ESV---RKVPHLYVYGK 83 (468)
Q Consensus 70 ~~~---~~l~~l~~~~n 83 (468)
+.+ ..|+.|++++|
T Consensus 120 ~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 120 RSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHTTTTCCCSEEECCCC
T ss_pred HHHhhCCceeEEECCCC
Confidence 122 23666777643
No 438
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=95.50 E-value=0.017 Score=56.10 Aligned_cols=64 Identities=16% Similarity=0.250 Sum_probs=52.6
Q ss_pred CCCCCcEEEccCCcccccCC-cccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCC
Q 012219 2 NCSKLRVLELGNNLLSGSIP-SEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPE 70 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g~~p-~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~ 70 (468)
+|++|+.++|. |+++ .|+ ..|.+|++|+.|+|.+| ++..-+.+|.++ +|+.|++++|.+. .++.
T Consensus 298 ~c~~L~~l~l~-~~i~-~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~-~l~~ 362 (401)
T 4fdw_A 298 GCPKLARFEIP-ESIR-ILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPP-QVFE 362 (401)
T ss_dssp TCTTCCEECCC-TTCC-EECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCC-BCCC
T ss_pred CCccCCeEEeC-CceE-EEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCc-cccc
Confidence 58899999999 5588 555 57999999999999665 774456679999 9999999999888 4443
No 439
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=95.15 E-value=0.032 Score=54.43 Aligned_cols=73 Identities=8% Similarity=0.024 Sum_probs=46.1
Q ss_pred ceeeeeCCceEEEEEcCC--------CCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccC-CceeeEEEEEeeCCEEEE
Q 012219 176 YCIGTGGYGSVYRARLPS--------GKVVALKKLHRSETEELASLESFGNEARLLSQIRH-RNIVKLYGFCLHRKCMFL 246 (468)
Q Consensus 176 ~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~l~~~~~~~~~~~l 246 (468)
+.+..|-...+|+....+ ++.+++|+..... .. .-+-.+|.++++.+.- .-..++++.+. + ++
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t-~~---~idR~~E~~~l~~L~~~gi~P~l~~~~~--~--~~ 147 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV-GK---FYDSKVELDVFRYLSNINIAPNIIADFP--E--GR 147 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--C---CCCHHHHHHHHHHHHHTTSSCCEEEEET--T--EE
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc-ch---hcCHHHHHHHHHHHHhcCCCCCEEEEcC--C--CE
Confidence 457778888999998753 5789998865432 11 1122367787777742 22345555432 2 68
Q ss_pred EEEeccCCCh
Q 012219 247 IYEYMEMGSL 256 (468)
Q Consensus 247 v~e~~~~gsL 256 (468)
|+||++|.+|
T Consensus 148 I~efI~G~~l 157 (424)
T 3mes_A 148 IEEFIDGEPL 157 (424)
T ss_dssp EEECCCSEEC
T ss_pred EEEEeCCccC
Confidence 9999998664
No 440
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=94.84 E-value=0.038 Score=53.49 Aligned_cols=78 Identities=15% Similarity=0.379 Sum_probs=53.8
Q ss_pred CCCCCcEEEccCCcccccCC-cccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCC-cCCC---cc
Q 012219 2 NCSKLRVLELGNNLLSGSIP-SEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPE-SVRK---VP 76 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g~~p-~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~-~~~~---l~ 76 (468)
++++|+.+.+. +.++ .|+ ..|.++.+|+.+.|..| ++..-..+|.+|++|+.+.|..| ++ .|+. .|.+ |+
T Consensus 286 ~c~~L~~i~l~-~~i~-~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~-~I~~~aF~~C~~L~ 360 (394)
T 4gt6_A 286 NCPALQDIEFS-SRIT-ELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VT-KIPESAFSNCTALN 360 (394)
T ss_dssp TCTTCCEEECC-TTCC-EECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CC-BCCGGGGTTCTTCC
T ss_pred cccccccccCC-Cccc-ccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cC-EEhHhHhhCCCCCC
Confidence 57788888886 5566 455 46888999999999765 66333556889999999988654 66 5654 4444 44
Q ss_pred ceeccccc
Q 012219 77 HLYVYGKN 84 (468)
Q Consensus 77 ~l~~~~n~ 84 (468)
.+.+.++.
T Consensus 361 ~i~~~~~~ 368 (394)
T 4gt6_A 361 NIEYSGSR 368 (394)
T ss_dssp EEEESSCH
T ss_pred EEEECCce
Confidence 45555543
No 441
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=94.73 E-value=0.035 Score=53.72 Aligned_cols=75 Identities=12% Similarity=0.200 Sum_probs=55.7
Q ss_pred CCCCCcEEEccCCcccccCC-cccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCC-cCCC---cc
Q 012219 2 NCSKLRVLELGNNLLSGSIP-SEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPE-SVRK---VP 76 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g~~p-~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~-~~~~---l~ 76 (468)
++++|+.+.+.+| ++ .|+ ..|.++++|+.++|.++ ++..-..+|.+|++|+.+++..| ++ .|++ .|.+ |+
T Consensus 295 ~~~~L~~i~l~~~-i~-~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~C~~L~ 369 (394)
T 4fs7_A 295 GCSSLTEVKLLDS-VK-FIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LR-KIGANAFQGCINLK 369 (394)
T ss_dssp TCTTCCEEEECTT-CC-EECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CC-EECTTTBTTCTTCC
T ss_pred ccccccccccccc-cc-eechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-cc-EehHHHhhCCCCCC
Confidence 5788999999866 66 554 56899999999999755 77333567999999999999877 76 6665 4544 44
Q ss_pred ceecc
Q 012219 77 HLYVY 81 (468)
Q Consensus 77 ~l~~~ 81 (468)
.+.+.
T Consensus 370 ~i~lp 374 (394)
T 4fs7_A 370 KVELP 374 (394)
T ss_dssp EEEEE
T ss_pred EEEEC
Confidence 45554
No 442
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=94.57 E-value=0.054 Score=51.99 Aligned_cols=72 Identities=15% Similarity=0.284 Sum_probs=51.0
Q ss_pred CCCCCcEEEccCCcccccCC-cccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCC-cCCCccc
Q 012219 2 NCSKLRVLELGNNLLSGSIP-SEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPE-SVRKVPH 77 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g~~p-~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~-~~~~l~~ 77 (468)
++.+|+.+.+.++ ++ .++ ..|.++++|+.+.+.+|.++..-+.+|.+|++|+.++|..| ++ .|+. .|.+++.
T Consensus 261 ~~~~l~~i~l~~~-i~-~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~C~~ 334 (379)
T 4h09_A 261 NCTALKTLNFYAK-VK-TVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LK-TIQVYAFKNCKA 334 (379)
T ss_dssp TCTTCCEEEECCC-CS-EECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTT
T ss_pred eeehhcccccccc-ce-eccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-cc-EEHHHHhhCCCC
Confidence 4677888888654 55 444 46888899999999888888333556888899999888754 66 5655 4544433
No 443
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=94.52 E-value=0.019 Score=49.45 Aligned_cols=60 Identities=18% Similarity=0.176 Sum_probs=46.1
Q ss_pred CCCcEEEccCCcccccCCc----ccccCCCCCEeeccCcccccc----ccccccCCCCCceecccCcc
Q 012219 4 SKLRVLELGNNLLSGSIPS----EINKLQELNYLNLSHNSINGK----ILSQLGEIPRIDTVDLSMNN 63 (468)
Q Consensus 4 ~~l~~l~l~~N~l~g~~p~----~~~~l~~L~~L~l~~N~l~g~----~p~~~~~l~~L~~l~l~~N~ 63 (468)
+.|+.|+|++|+|...--. .+..-+.|+.|+|++|+|+.. +-..+..=+.|+.|+|++|.
T Consensus 70 ~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~ 137 (197)
T 1pgv_A 70 KHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQR 137 (197)
T ss_dssp SCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCS
T ss_pred CCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCc
Confidence 5799999999999843333 344568999999999999854 34456666789999999763
No 444
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=94.35 E-value=0.064 Score=51.85 Aligned_cols=70 Identities=17% Similarity=0.225 Sum_probs=47.1
Q ss_pred CCCCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCC-cCCCccc
Q 012219 2 NCSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPE-SVRKVPH 77 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~-~~~~l~~ 77 (468)
+++.|+.+.+..+.+. ...|.++.+|+.+.+.+| ++..-..+|.+|++|+.++|.++ ++ .|+. .|.+++.
T Consensus 274 ~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~c~~ 344 (394)
T 4fs7_A 274 NCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VE-EIGKRSFRGCTS 344 (394)
T ss_dssp TCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CC-EECTTTTTTCTT
T ss_pred cccccceeccCceeec---cccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-cc-EEhHHhccCCCC
Confidence 4566777777665432 246788889999988765 66333456888999999998754 66 5654 4544433
No 445
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=93.66 E-value=0.1 Score=50.03 Aligned_cols=72 Identities=8% Similarity=0.074 Sum_probs=53.9
Q ss_pred CCCCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCC-cCCCcc
Q 012219 2 NCSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPE-SVRKVP 76 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~-~~~~l~ 76 (468)
++++|+.+.+..+ ++..-...|.++.+|+.+.+..+ ++..-...|.+|++|+.+++.+|.++ .|++ .|.++.
T Consensus 238 ~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~-~I~~~aF~~c~ 310 (379)
T 4h09_A 238 GMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIE-TLEPRVFMDCV 310 (379)
T ss_dssp TCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCC-EECTTTTTTCT
T ss_pred CCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccc-eehhhhhcCCC
Confidence 5678999999876 66333457888999999999765 66333456899999999999999888 6765 454443
No 446
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=93.30 E-value=0.15 Score=49.12 Aligned_cols=72 Identities=13% Similarity=0.222 Sum_probs=52.7
Q ss_pred CCCCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCC-cCCCccc
Q 012219 2 NCSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPE-SVRKVPH 77 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~-~~~~l~~ 77 (468)
+|++|+.+.+.++-.+ .-...|.++.+|+.+.+. +.++..-...|.+|++|+.++|..| ++ .|++ .|.++..
T Consensus 263 ~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~C~~ 335 (394)
T 4gt6_A 263 SCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-IT-QILDDAFAGCEQ 335 (394)
T ss_dssp TCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTT
T ss_pred ecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-cc-EehHhHhhCCCC
Confidence 5788999999877654 555678999999999996 5577333456999999999999865 66 5655 4544433
No 447
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=93.06 E-value=0.3 Score=42.32 Aligned_cols=117 Identities=7% Similarity=0.088 Sum_probs=81.1
Q ss_pred cCCceeeEEEEEeeCCEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCce
Q 012219 227 RHRNIVKLYGFCLHRKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNV 306 (468)
Q Consensus 227 ~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NI 306 (468)
.||+.+.. .+-...+.+.+.|+.-+.+.=...++ .++...+++++.+|+....+++ .-+|--|.|+|+
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~ik------~~~~~eKlr~l~ni~~l~~~~~-----~r~tf~L~P~NL 110 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDNIK------SFTKNEKLRYLLNIKNLEEVNR-----TRYTFVLAPDEL 110 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGGGG------GSCHHHHHHHHHHGGGGGGGGG-----SSEECCCSGGGE
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHHHH------hcCHHHHHHHHHHHHHHHHHhc-----CceEEEEecceE
Confidence 68888866 56666777777666554322222232 2778899999999998886666 347889999999
Q ss_pred eeCCCCCeEEeeccccccccCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCc
Q 012219 307 LLNSELEAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGEL 377 (468)
Q Consensus 307 ll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~ 377 (468)
+++.++.+++.-.|+...+ +|.- .++..=.-.+=+++..+++++..|+.
T Consensus 111 ~f~~~~~p~i~~RGik~~l-----------------~P~~-----~~ee~fL~qyKAliiall~~K~~Fe~ 159 (215)
T 4ann_A 111 FFTRDGLPIAKTRGLQNVV-----------------DPLP-----VSEAEFLTRYKALVICAFNEKQSFDA 159 (215)
T ss_dssp EECTTSCEEESCCEETTTB-----------------SCCC-----CCHHHHHHHHHHHHHHHHCTTCCHHH
T ss_pred EEcCCCCEEEEEccCccCC-----------------CCCC-----CCHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 9999999999887765332 2221 11111233577899999999999874
No 448
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=92.47 E-value=0.3 Score=47.26 Aligned_cols=30 Identities=23% Similarity=0.432 Sum_probs=24.8
Q ss_pred CeEecCCCCCceee------CCCCCeEEeecccccc
Q 012219 295 PIVHRDISSNNVLL------NSELEAFVADFGVARL 324 (468)
Q Consensus 295 ~ivH~dlk~~NIll------~~~~~~kl~Dfg~~~~ 324 (468)
.++|+|+.+.||++ +++..+.+.||-.|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 46799999999999 4567789999987753
No 449
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=90.90 E-value=0.77 Score=39.94 Aligned_cols=115 Identities=13% Similarity=0.104 Sum_probs=80.2
Q ss_pred cCCceeeEEEEEeeCCEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHH-HHHhcCCCCeEecCCCCCc
Q 012219 227 RHRNIVKLYGFCLHRKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALS-YLHHDCTPPIVHRDISSNN 305 (468)
Q Consensus 227 ~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~-~LH~~~~~~ivH~dlk~~N 305 (468)
.||++ -..+-.+++.+.+.++.-+++.=...++. ++...+++++.+|+.... +++ .-+|--|.|+|
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~~------~~~~eKlrll~nl~~L~~~~~~-----~r~tf~l~P~N 114 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIRK------TTLLSRIRAAIHLVSKVKHHSA-----RRLIFIVCPEN 114 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHHT------SCHHHHHHHHHHHHHHHSSCCS-----SSEECCCCGGG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHHh------cCHHHHHHHHHHHHHHHHHhhh-----CceeEEEeCce
Confidence 57777 44555677888887877644433334432 778899999999887766 554 56888999999
Q ss_pred eeeCCCCCeEEeeccccccccCCCCCceeccccccccccccccCCCCCccchh-hHHHHHHHHHHhCCCCCCc
Q 012219 306 VLLNSELEAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDV-YSFGVVALEVLMGKHPGEL 377 (468)
Q Consensus 306 Ill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv-~s~Gvil~el~tg~~p~~~ 377 (468)
|++|.++.+++.-.|+-..+ +|.-.. ..|- -.+=+++..++.++..|+.
T Consensus 115 L~f~~~~~p~i~hRGi~~~l-----------------pP~e~~------ee~fl~qyKali~all~~K~~Fe~ 164 (219)
T 4ano_A 115 LMFNRALEPFFLHVGVKESL-----------------PPDEWD------DERLLREVKATVLALTEGEYRFDE 164 (219)
T ss_dssp EEECTTCCEEESCCEETTTB-----------------SSCSCC------HHHHHHHHHHHHHHHTTCSSCHHH
T ss_pred EEEeCCCcEEEEEcCCcccC-----------------CCCCCC------HHHHHHHHHHHHHHHHcCCCCHHH
Confidence 99999999999877765332 332211 1233 2577888899999988764
No 450
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=83.76 E-value=0.11 Score=51.30 Aligned_cols=62 Identities=19% Similarity=0.154 Sum_probs=17.3
Q ss_pred ccceeeeeCCceEEEEEcCC-CCEEEE------EEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEe
Q 012219 174 IKYCIGTGGYGSVYRARLPS-GKVVAL------KKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCL 239 (468)
Q Consensus 174 ~~~~lg~G~~g~Vy~~~~~~-~~~vav------K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~ 239 (468)
+.+.|| ||.||+|.+.. ..+||| |..+...... .....|.+|..++..++|+|+++..++..
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~-e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSE-KRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC------------------------------------CBCCCEEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCccccccccccc-cccccccccccccccccccccCCCcceEE
Confidence 345666 99999998754 357888 7665433322 33457889999999999999999887754
No 451
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=83.55 E-value=1.3 Score=27.46 Aligned_cols=21 Identities=29% Similarity=0.509 Sum_probs=8.0
Q ss_pred hhhHHHHHHHHHHHHhhheec
Q 012219 111 IILPMVALLALIFGILFVRRR 131 (468)
Q Consensus 111 i~~~~~~l~~l~~~~~~~~~~ 131 (468)
++.+++++++++++++++.||
T Consensus 17 VVgGv~~~~ii~~~~~~~~RR 37 (44)
T 2ks1_B 17 MVGALLLLLVVALGIGLFMRR 37 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT
T ss_pred hhHHHHHHHHHHHHHHHHhhh
Confidence 333344433443333333333
No 452
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=81.19 E-value=1.6 Score=26.99 Aligned_cols=7 Identities=43% Similarity=1.056 Sum_probs=2.6
Q ss_pred hhheecc
Q 012219 126 LFVRRRR 132 (468)
Q Consensus 126 ~~~~~~~ 132 (468)
+++++|+
T Consensus 32 ~~~RRRr 38 (44)
T 2l2t_A 32 VYVRRKS 38 (44)
T ss_dssp HHHHTTC
T ss_pred HHhhhhh
Confidence 3333333
No 453
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=75.79 E-value=2.3 Score=26.22 Aligned_cols=10 Identities=30% Similarity=0.703 Sum_probs=4.5
Q ss_pred HhhheeccCC
Q 012219 125 ILFVRRRRDK 134 (468)
Q Consensus 125 ~~~~~~~~~~ 134 (468)
+++++||+.+
T Consensus 32 ~~~~RRR~~~ 41 (44)
T 2jwa_A 32 GILIKRRQQK 41 (44)
T ss_dssp HHHHHHHCSC
T ss_pred Hhheehhhhh
Confidence 4444444443
No 454
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=68.05 E-value=3.8 Score=24.48 Aligned_cols=9 Identities=33% Similarity=0.766 Sum_probs=4.1
Q ss_pred eehhhhHHH
Q 012219 108 LVAIILPMV 116 (468)
Q Consensus 108 i~~i~~~~~ 116 (468)
+.+++++.+
T Consensus 13 IAGiVvG~v 21 (38)
T 2k1k_A 13 IVAVIFGLL 21 (38)
T ss_dssp HHHHHHHHH
T ss_pred eeeeehHHH
Confidence 444444444
No 455
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=58.96 E-value=9.3 Score=28.42 Aligned_cols=50 Identities=10% Similarity=0.032 Sum_probs=36.5
Q ss_pred CCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcc
Q 012219 13 NNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNN 63 (468)
Q Consensus 13 ~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~ 63 (468)
+..++..-...|.+|++|+.+.|-.+ ++..-..+|.+|.+|+.+.+....
T Consensus 5 g~~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~~ 54 (100)
T 2lz0_A 5 GEPVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGED 54 (100)
T ss_dssp CCCCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCSC
T ss_pred CCccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCCC
Confidence 44566333456889999999999876 663445679999999999887653
No 456
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=45.83 E-value=2.5e+02 Score=28.30 Aligned_cols=45 Identities=24% Similarity=0.267 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHH--HHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccc
Q 012219 271 WAKRVNVVKGMC--HALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVA 322 (468)
Q Consensus 271 ~~~~~~i~~~ia--~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~ 322 (468)
+..+..++...| .-+.|+= | =+|=.++|||++.+|.+.=+|||.+
T Consensus 454 ~~a~~nF~~S~A~ySvv~YIL-----G--igDRH~~NILld~tG~v~HIDFG~~ 500 (614)
T 3ls8_A 454 AEVMDTYVKSCAGYCVITYIL-----G--VGDRHLDNLLLTKTGKLFHIDFGYI 500 (614)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-----T--CCCCCTTSEEECTTSCEEECCCSSC
T ss_pred HHHHHHHHHHHHHHhHhheee-----e--ccCCCCcceeEcCCCCEeeeehHHh
Confidence 445555665544 3455655 2 2577899999999999999999987
No 457
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=35.04 E-value=55 Score=24.09 Aligned_cols=37 Identities=14% Similarity=0.118 Sum_probs=29.4
Q ss_pred CCCCCcEEEccCCcccccCCcccccCCCCCEeeccCcc
Q 012219 2 NCSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNS 39 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~ 39 (468)
+|++|+.+.|..+ ++..-...|.+|.+|+.+.+....
T Consensus 18 ~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~~ 54 (100)
T 2lz0_A 18 GNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGED 54 (100)
T ss_dssp TCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCSC
T ss_pred CCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCCC
Confidence 6899999999976 552445679999999999987653
No 458
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=34.80 E-value=1.2e+02 Score=27.88 Aligned_cols=132 Identities=14% Similarity=0.132 Sum_probs=70.3
Q ss_pred eeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEe--------------------
Q 012219 180 TGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCL-------------------- 239 (468)
Q Consensus 180 ~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~-------------------- 239 (468)
++|.+.||.+.. ++..++||-.. .. ..+.|..++...-.+.-|+.. ++.+..
T Consensus 78 ~~Gstgvff~~t-d~~~~VVK~s~--~l----~~E~l~s~LA~~LGlpiP~~R-iv~~~~~E~~e~~~~L~~~~~~~~~l 149 (342)
T 1cja_A 78 EKGTEGLFFVET-ESGVFIVKRST--NI----ESETFCSLLCMRLGLHAPKVR-VVSSNSEEGTNMLECLAAIDKSFRVI 149 (342)
T ss_dssp CSTTSCEEEEEE-SSCEEEEECCT--TH----HHHHHHHHHHHHHTCCCCCEE-EEESSSHHHHHHHHHHHHHCSSSCHH
T ss_pred cCCCCCeEEEEe-CCCEEEEeCcH--HH----HHHHHHHHHHHHhCCCCCCee-EEeeCcHHHHHHHHHHHHhhhhhHHH
Confidence 344556666655 57789999442 11 224455566666566666642 332220
Q ss_pred ---eCCEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHH--HHHHHHHHhcCCC-CeEe-cCCCCCceeeCCCC
Q 012219 240 ---HRKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGM--CHALSYLHHDCTP-PIVH-RDISSNNVLLNSEL 312 (468)
Q Consensus 240 ---~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i--a~~l~~LH~~~~~-~ivH-~dlk~~NIll~~~~ 312 (468)
..+..+++|||.+|..|.+.-...-. ..+.. +.+.++ .-++.++..+..+ +.+. .-=.+.|||++.++
T Consensus 150 ~~l~~~~~~l~meyv~G~~L~e~~~~~~~-~~f~~----~~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n 224 (342)
T 1cja_A 150 TTLANQANILLMELVRGITLNKLTTTSAP-EVLTK----STMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERG 224 (342)
T ss_dssp HHHTTCSEEEEEECCCEEESTTCCSSSHH-HHSCH----HHHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBT
T ss_pred HHhhcccceehhhhcCCCccccchhhhhh-hhcCH----HHHHhhchhheehhhhcCCccCcccccCCCChhheEEeCCC
Confidence 12246799999997666543221100 00221 222332 2344555544333 3222 22478899998765
Q ss_pred C-eEEeecccccc
Q 012219 313 E-AFVADFGVARL 324 (468)
Q Consensus 313 ~-~kl~Dfg~~~~ 324 (468)
. +.++|-+.+..
T Consensus 225 ~~~~~IDhn~af~ 237 (342)
T 1cja_A 225 ATVVPIDSKIIPL 237 (342)
T ss_dssp TCEEECSCCCCCC
T ss_pred CeEEEEcCCcccc
Confidence 4 78889988854
No 459
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=29.57 E-value=62 Score=21.70 Aligned_cols=6 Identities=50% Similarity=0.434 Sum_probs=2.3
Q ss_pred hhHHHH
Q 012219 112 ILPMVA 117 (468)
Q Consensus 112 ~~~~~~ 117 (468)
+++.++
T Consensus 13 vlGg~~ 18 (70)
T 2klu_A 13 VLGGVA 18 (70)
T ss_dssp HHHHHH
T ss_pred HHhHHH
Confidence 444333
No 460
>1zza_A Stannin, AG8_1; helix, membrane protein; NMR {Homo sapiens}
Probab=23.77 E-value=1e+02 Score=20.90 Aligned_cols=12 Identities=50% Similarity=0.481 Sum_probs=5.0
Q ss_pred HHHHHHHHHhhh
Q 012219 117 ALLALIFGILFV 128 (468)
Q Consensus 117 ~l~~l~~~~~~~ 128 (468)
++.+++++.|++
T Consensus 26 alg~li~gcwcy 37 (90)
T 1zza_A 26 ALGALILGCWCY 37 (90)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHHH
Confidence 334444444433
No 461
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=20.33 E-value=53 Score=33.75 Aligned_cols=44 Identities=25% Similarity=0.308 Sum_probs=31.4
Q ss_pred HHHHHHHHHH--HHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccc
Q 012219 273 KRVNVVKGMC--HALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVAR 323 (468)
Q Consensus 273 ~~~~i~~~ia--~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~ 323 (468)
.+..++..+| .-+.|+= | =+|=.++|||++.+|.+.=+|||.+-
T Consensus 530 ar~nF~~SlA~~Svv~YIL-----G--lGDRH~~NILid~tG~v~HIDFG~~f 575 (696)
T 2x6h_A 530 VMDTYIKSCAGYCVITYLL-----G--VGDRHLDNLLLTTNGKLFHIDFGYIL 575 (696)
T ss_dssp HHHHHHHHHHHHHHHHHHH-----T--CCCCCTTTEEECTTSCEEECCCCSCT
T ss_pred HHHHHHHHHHHHHHHHHHc-----c--CCCCCCcceEEeCCCCEEEEeehhhh
Confidence 4445555544 3344554 2 36889999999999999999999873
Done!