Query 012222
Match_columns 468
No_of_seqs 472 out of 2422
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 05:10:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012222.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012222hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3byi_A RHO GTPase activating p 100.0 4.1E-45 1.4E-49 342.9 15.4 203 154-375 8-214 (214)
2 2ee4_A RHO GTPase activating p 100.0 7E-45 2.4E-49 340.1 16.9 198 161-377 8-207 (209)
3 3msx_B RHO GTPase-activating p 100.0 7.8E-45 2.7E-49 337.9 15.7 196 159-372 6-201 (201)
4 3iug_A RHO/CDC42/RAC GTPase-ac 100.0 3.2E-44 1.1E-48 340.2 16.0 210 154-377 10-224 (229)
5 1tx4_A P50-rhogap; complex (GT 100.0 5.8E-44 2E-48 331.1 16.3 193 159-372 2-198 (198)
6 1f7c_A Rhogap protein; GTPase 100.0 4.1E-44 1.4E-48 339.6 15.4 195 164-377 17-221 (231)
7 2osa_A N-chimaerin; RHO-GAP, G 100.0 1.2E-43 4.1E-48 330.0 17.3 192 163-372 6-202 (202)
8 3fk2_A Glucocorticoid receptor 100.0 6.9E-44 2.4E-48 341.1 15.9 196 160-374 48-245 (246)
9 1ow3_A RHO-GTPase-activating p 100.0 8.2E-43 2.8E-47 332.9 16.3 198 158-376 37-238 (242)
10 1pbw_A Rhogap domain, phosphat 100.0 1.2E-42 4.1E-47 326.4 12.6 192 163-377 5-203 (216)
11 3kuq_A RHO GTPase-activating p 100.0 3.7E-41 1.3E-45 318.7 17.4 206 161-371 16-228 (228)
12 2ovj_A Mgcracgap, RAC GTPase-a 100.0 1E-40 3.5E-45 309.8 16.3 190 168-374 4-196 (201)
13 3eap_A RHO GTPase-activating p 100.0 4.8E-40 1.6E-44 318.5 17.1 200 159-376 58-261 (271)
14 3cxl_A N-chimerin; SH2, RHO-GA 100.0 2.1E-38 7.1E-43 330.1 17.9 193 162-372 266-463 (463)
15 2xs6_A Phosphatidylinositol 3- 100.0 4.3E-40 1.5E-44 307.2 3.7 191 162-375 19-212 (214)
16 3qis_A Inositol polyphosphate 100.0 9.9E-35 3.4E-39 292.8 16.5 141 179-327 198-338 (366)
17 1v88_A Oxysterol binding prote 99.8 1.7E-19 5.9E-24 154.9 13.0 102 15-128 4-127 (130)
18 1wi1_A Calcium-dependent activ 99.8 1.3E-19 4.5E-24 152.2 10.2 99 16-128 5-113 (126)
19 1x1f_A Signal-transducing adap 99.8 1.1E-18 3.7E-23 153.1 14.6 95 18-126 17-114 (149)
20 1dyn_A Dynamin; signal transdu 99.8 1.9E-18 6.3E-23 143.5 11.9 100 18-123 11-115 (125)
21 2da0_A 130-kDa phosphatidylino 99.8 3.3E-18 1.1E-22 143.6 13.2 104 11-130 2-106 (114)
22 1wgq_A FYVE, rhogef and PH dom 99.8 2.6E-18 8.8E-23 142.9 11.2 100 16-128 5-106 (109)
23 1pls_A Pleckstrin homology dom 99.8 6.1E-18 2.1E-22 141.5 13.5 100 17-129 3-105 (113)
24 2dhk_A TBC1 domain family memb 99.8 3.9E-18 1.3E-22 144.3 12.2 99 16-126 5-105 (119)
25 2rsg_A Collagen type IV alpha- 99.8 1.6E-18 5.4E-23 140.2 9.1 92 19-123 1-92 (94)
26 2p0d_A RHO GTPase-activating p 99.8 4.3E-18 1.5E-22 146.2 11.3 110 16-127 9-126 (129)
27 1v89_A Hypothetical protein KI 99.8 1.2E-17 4E-22 140.4 13.7 103 16-129 5-116 (118)
28 2w2x_D 1-phosphatidylinositol- 99.7 7.3E-19 2.5E-23 150.0 6.0 105 17-127 10-121 (124)
29 2d9v_A Pleckstrin homology dom 99.7 5.6E-18 1.9E-22 145.7 11.5 109 15-127 4-116 (130)
30 1v5u_A SBF1, SET binding facto 99.7 4.7E-18 1.6E-22 142.9 10.8 100 16-129 5-115 (117)
31 2lul_A Tyrosine-protein kinase 99.7 1.5E-17 5.1E-22 148.8 14.5 114 16-141 12-136 (164)
32 1v5p_A Pleckstrin homology dom 99.7 1E-17 3.4E-22 143.1 12.2 97 18-128 14-123 (126)
33 2cod_A Centaurin-delta 1; ARF 99.7 1.3E-17 4.6E-22 139.9 12.8 97 15-127 4-101 (115)
34 1eaz_A Tandem PH domain contai 99.7 1.2E-17 4.1E-22 142.1 12.6 103 11-127 6-113 (125)
35 2i5f_A Pleckstrin; PH domain, 99.7 2.1E-17 7E-22 137.1 13.3 96 16-124 4-108 (109)
36 1fgy_A GRP1; PH domain, signal 99.7 2.1E-17 7.2E-22 140.8 13.2 102 17-129 3-124 (127)
37 1btk_A Bruton'S tyrosine kinas 99.7 7.9E-18 2.7E-22 151.3 10.7 100 18-129 2-136 (169)
38 3cxb_B Pleckstrin homology dom 99.7 1.4E-17 4.7E-22 139.4 11.3 96 20-126 1-102 (112)
39 4a6h_A Phosphatidylinositol 4, 99.7 1.2E-17 4E-22 141.2 10.8 98 19-124 6-117 (120)
40 2dn6_A KIAA0640 protein; PH do 99.7 2.5E-17 8.7E-22 137.9 12.3 98 16-127 5-105 (115)
41 3a8p_A T-lymphoma invasion and 99.7 1.7E-19 6E-24 173.3 -1.2 108 16-128 8-127 (263)
42 1x05_A Pleckstrin; PH domain, 99.7 4.8E-17 1.6E-21 139.3 14.1 100 15-127 14-122 (129)
43 1x1g_A Pleckstrin 2; PH domain 99.7 3.2E-17 1.1E-21 140.3 12.9 100 14-126 13-125 (129)
44 1fao_A Dual adaptor of phospho 99.7 3.8E-17 1.3E-21 139.3 13.0 98 16-127 15-114 (126)
45 1u5d_A SKAP55, SRC kinase-asso 99.7 3.1E-17 1.1E-21 135.5 11.8 98 18-126 2-106 (108)
46 2yry_A Pleckstrin homology dom 99.7 7.3E-17 2.5E-21 136.6 14.2 99 15-125 18-120 (122)
47 2dkp_A Pleckstrin homology dom 99.7 5.7E-17 1.9E-21 138.5 13.6 98 15-125 17-119 (128)
48 1unq_A RAC-alpha serine/threon 99.7 1.5E-17 5.1E-22 141.7 9.9 106 17-128 6-113 (125)
49 2d9x_A Oxysterol binding prote 99.7 1.4E-17 4.7E-22 141.0 9.1 100 16-127 5-106 (120)
50 2coc_A FYVE, rhogef and PH dom 99.7 3.2E-17 1.1E-21 136.8 11.0 100 17-127 6-108 (112)
51 2y7b_A Actin-binding protein a 99.7 1.4E-17 4.9E-22 143.5 9.2 101 17-126 3-129 (134)
52 1upq_A PEPP1; PH domain, phosp 99.7 1E-16 3.5E-21 135.9 13.4 99 16-126 8-110 (123)
53 1wg7_A Dedicator of cytokinesi 99.7 4E-17 1.4E-21 143.6 11.1 102 16-128 15-127 (150)
54 3aj4_A Pleckstrin homology dom 99.7 4.2E-17 1.4E-21 136.1 10.4 103 17-125 3-111 (112)
55 1wjm_A Beta-spectrin III; PH d 99.7 3.5E-17 1.2E-21 139.1 9.7 107 16-129 5-121 (123)
56 1u5f_A SRC-associated adaptor 99.7 1.1E-16 3.9E-21 140.5 13.2 100 17-127 15-121 (148)
57 3rcp_A Pleckstrin homology dom 99.7 5.3E-17 1.8E-21 133.3 10.2 95 21-127 1-95 (103)
58 2rlo_A Centaurin-gamma 1; spli 99.7 8.6E-17 2.9E-21 137.8 11.4 106 18-126 3-125 (128)
59 2d9y_A Pleckstrin homology dom 99.7 1E-16 3.4E-21 134.7 11.5 98 16-125 8-109 (117)
60 3pp2_A RHO GTPase-activating p 99.7 1.2E-16 3.9E-21 136.3 10.8 108 16-125 5-123 (124)
61 1dro_A Beta-spectrin; cytoskel 99.7 4.4E-17 1.5E-21 138.4 7.8 108 16-126 5-120 (122)
62 1u5e_A SRC-associated adaptor 99.7 1.5E-16 5.2E-21 148.0 12.1 99 17-126 104-209 (211)
63 2cof_A Protein KIAA1914; PH do 99.7 5.9E-17 2E-21 134.2 8.2 98 16-126 5-102 (107)
64 2j59_M RHO-GTPase activating p 99.7 1.4E-16 4.8E-21 143.0 10.7 100 18-127 2-113 (168)
65 1btn_A Beta-spectrin; signal t 99.6 5.5E-16 1.9E-20 127.7 10.4 96 21-123 1-106 (106)
66 3tfm_A Myosin X; split PH doma 99.6 8.1E-16 2.8E-20 145.0 11.2 100 16-127 55-157 (228)
67 2dtc_A RAL guanine nucleotide 99.6 3.5E-15 1.2E-19 126.1 13.5 107 20-127 2-114 (126)
68 1qqg_A IRS-1, insulin receptor 99.6 1.3E-15 4.6E-20 146.2 9.0 97 13-127 4-114 (264)
69 2q13_A DCC-interacting protein 99.6 3.2E-15 1.1E-19 152.0 12.1 99 17-127 276-377 (385)
70 4h8s_A DCC-interacting protein 99.6 2.4E-15 8.2E-20 154.0 11.1 102 16-127 298-400 (407)
71 2r09_A Cytohesin-3; autoinhibi 99.6 3.8E-15 1.3E-19 149.0 11.8 103 18-131 212-334 (347)
72 3lju_X ARF-GAP with dual PH do 99.6 1.4E-14 4.8E-19 146.7 13.0 97 16-126 266-373 (386)
73 2rov_A RHO-associated protein 99.5 1E-14 3.4E-19 122.6 7.8 99 21-126 3-116 (117)
74 3tca_A Amyloid beta A4 precurs 99.5 3.1E-14 1.1E-18 138.9 10.9 105 18-125 167-276 (291)
75 2fjl_A 1-phosphatidylinositol- 99.5 1E-13 3.4E-18 119.4 11.7 105 20-126 2-149 (150)
76 3lju_X ARF-GAP with dual PH do 99.5 8.6E-14 2.9E-18 141.0 9.2 96 19-125 146-246 (386)
77 2ys3_A UNC-112-related protein 99.5 4.1E-13 1.4E-17 113.4 11.1 100 18-125 8-112 (137)
78 2d9w_A Docking protein 2; PH d 99.4 1.1E-12 3.9E-17 108.5 10.8 101 16-125 9-121 (127)
79 3a8n_A TIAM-1, T-lymphoma inva 99.4 4.3E-13 1.5E-17 128.5 6.5 105 16-125 8-124 (279)
80 4ejn_A RAC-alpha serine/threon 99.3 2.2E-12 7.7E-17 133.2 9.5 104 17-126 4-109 (446)
81 3hk0_A Growth factor receptor- 99.3 1.3E-11 4.5E-16 117.0 11.5 107 17-126 130-241 (256)
82 4gmv_A RAS-associated and plec 99.2 2E-11 7E-16 117.0 10.5 107 17-126 156-267 (281)
83 4f7h_A Fermitin family homolog 99.2 5.1E-11 1.8E-15 103.0 10.1 103 18-125 46-150 (173)
84 4bbk_A Kindlin-1, fermitin fam 99.2 5.6E-11 1.9E-15 101.6 9.5 103 18-125 25-129 (165)
85 1w1g_A HPDK1, 3-phosphoinositi 99.2 1E-10 3.6E-15 100.5 9.6 93 15-126 48-140 (151)
86 2coa_A Protein kinase C, D2 ty 98.9 6.1E-09 2.1E-13 86.1 9.9 98 14-125 3-119 (125)
87 2d9z_A Protein kinase C, NU ty 98.8 2.6E-08 9E-13 82.5 11.4 99 14-126 3-124 (129)
88 1v5m_A SH2 and PH domain-conta 98.1 4.5E-05 1.5E-09 63.3 13.0 104 17-126 16-131 (136)
89 3tfm_A Myosin X; split PH doma 97.9 7.7E-06 2.6E-10 76.5 5.7 39 18-58 20-58 (228)
90 3ml4_A Protein DOK-7; tyrosine 97.7 8.3E-05 2.8E-09 67.6 8.5 98 17-126 7-114 (224)
91 2lg1_A A-kinase anchor protein 97.7 9.9E-05 3.4E-09 66.5 9.0 108 17-129 69-176 (185)
92 1v61_A RAC/CDC42 guanine nucle 97.4 0.0013 4.5E-08 55.5 10.8 86 37-128 44-129 (132)
93 3odw_A RHO guanine nucleotide 97.3 0.001 3.6E-08 69.9 11.3 106 17-130 410-529 (536)
94 3p6a_A RHO guanine nucleotide 97.3 0.0013 4.6E-08 65.7 11.6 103 17-127 257-373 (377)
95 3t06_A PDZ-rhogef, RHO guanine 97.3 0.0017 5.9E-08 65.9 12.1 105 17-129 293-412 (418)
96 1zc3_B Exocyst complex protein 97.1 0.0047 1.6E-07 50.7 11.1 101 17-126 6-108 (113)
97 1xcg_A PDZ-rhogef, RHO guanine 97.1 0.0062 2.1E-07 60.6 13.6 103 17-127 251-368 (368)
98 1mai_A Phospholipase C delta-1 96.9 0.0072 2.5E-07 51.0 10.6 40 87-127 84-123 (131)
99 3qwm_A Iqsec1, IQ motif and SE 96.8 0.012 4.2E-07 49.8 11.2 103 18-126 12-123 (140)
100 1txd_A RHO guanine nucleotide 96.8 0.0031 1.1E-07 63.3 8.9 107 17-127 255-371 (385)
101 1nty_A Triple functional domai 96.8 0.0096 3.3E-07 57.8 12.1 107 18-127 202-310 (311)
102 1dbh_A Protein (human SOS 1); 96.7 0.016 5.3E-07 57.3 13.0 102 17-127 245-351 (354)
103 2rgn_B RHOA/RAC/CDC42 exchange 96.6 0.014 4.9E-07 57.7 12.3 109 17-126 205-319 (354)
104 3mpx_A FYVE, rhogef and PH dom 96.6 0.01 3.6E-07 60.3 11.0 97 17-127 242-339 (434)
105 1kz7_A Guanine nucleotide exch 96.5 0.034 1.2E-06 55.0 13.7 109 17-127 208-327 (353)
106 3zvr_A Dynamin-1; hydrolase, D 96.5 0.015 5.2E-07 63.1 11.8 98 19-122 540-642 (772)
107 2dfk_A Collybistin II; DH doma 96.4 0.034 1.2E-06 56.0 13.6 109 16-127 254-365 (402)
108 2pz1_A RHO guanine nucleotide 96.3 0.029 9.9E-07 57.6 12.6 103 17-127 332-442 (466)
109 2vrw_B P95VAV, VAV1, proto-onc 96.2 0.029 9.9E-07 56.5 11.5 104 18-127 233-337 (406)
110 3ky9_A Proto-oncogene VAV; cal 95.7 0.042 1.4E-06 58.2 10.8 104 18-127 405-509 (587)
111 2z0q_A XPLN, RHO guanine nucle 95.5 0.059 2E-06 52.9 10.5 100 18-124 231-345 (346)
112 3ksy_A SOS-1, SON of sevenless 95.5 0.054 1.9E-06 61.3 11.0 102 17-127 442-548 (1049)
113 3v5w_A G-protein coupled recep 95.4 0.068 2.3E-06 57.4 11.1 97 16-127 556-654 (689)
114 3jzy_A Intersectin 2; C2 domai 95.3 0.0031 1.1E-07 65.6 0.0 98 18-127 252-364 (510)
115 1foe_A T-lymphoma invasion and 93.0 1.1 3.8E-05 44.2 13.3 28 99-126 340-367 (377)
116 3hie_A Protein PSL1, exocyst c 82.5 7.5 0.00026 33.7 9.2 82 37-127 64-150 (171)
117 1fho_A UNC-89; pleckstrin homo 81.8 2.5 8.5E-05 34.6 5.7 101 18-126 9-113 (119)
118 1z87_A Alpha-1-syntrophin; pro 80.3 3 0.0001 39.1 6.5 38 86-125 224-262 (263)
119 2adz_A Alpha-1-syntrophin; pro 70.9 7.2 0.00025 34.1 5.9 37 87-125 140-177 (178)
120 3a58_A Exocyst complex compone 68.6 18 0.00062 34.1 8.4 85 34-127 131-220 (320)
121 3qr0_A Phospholipase C-beta (P 66.6 19 0.00064 39.3 9.4 38 89-126 104-143 (816)
122 2zkm_X 1-phosphatidylinositol- 61.8 26 0.00088 38.2 9.4 38 89-126 97-136 (799)
123 3ulb_A Target of rapamycin com 56.2 79 0.0027 25.6 10.9 28 99-126 88-115 (121)
124 3a98_B Engulfment and cell mot 49.0 1.1E+02 0.0037 27.2 9.8 35 90-126 117-151 (203)
125 3ohm_B 1-phosphatidylinositol- 48.1 32 0.0011 37.8 7.3 38 89-126 101-140 (885)
126 4emo_A Sharpin; pleckstrin hom 44.7 24 0.00082 28.3 4.1 38 88-125 86-123 (129)
127 3llb_A Uncharacterized protein 29.9 39 0.0013 25.1 3.2 46 198-248 7-52 (83)
128 2r2z_A Hemolysin; APC85144, en 27.1 49 0.0017 25.1 3.4 46 198-248 14-59 (93)
129 2rk5_A Putative hemolysin; str 27.0 49 0.0017 24.8 3.3 46 198-248 6-51 (87)
130 2pli_A Uncharacterized protein 26.6 48 0.0016 25.1 3.2 46 198-248 16-61 (91)
131 1deq_A Fibrinogen (alpha chain 26.4 1E+02 0.0036 29.9 6.1 100 209-324 67-167 (390)
132 3lae_A UPF0053 protein HI0107; 26.3 41 0.0014 24.9 2.7 46 198-248 7-52 (81)
133 2p3h_A Uncharacterized CBS dom 25.9 52 0.0018 25.7 3.3 46 198-248 10-55 (101)
134 2p13_A CBS domain; alpha-beta 25.3 56 0.0019 24.6 3.4 47 198-248 13-60 (90)
135 2pls_A CBS domain protein; APC 25.2 59 0.002 24.2 3.4 48 198-248 7-56 (86)
136 2p4p_A Hypothetical protein HD 22.5 67 0.0023 23.9 3.3 48 198-248 7-54 (86)
137 2oai_A Hemolysin; PFAM03471, x 21.6 58 0.002 24.8 2.8 47 198-248 16-64 (94)
No 1
>3byi_A RHO GTPase activating protein 15; BM046, arhgap15, structural genomics consortium, signaling protein; 2.25A {Homo sapiens}
Probab=100.00 E-value=4.1e-45 Score=342.93 Aligned_cols=203 Identities=27% Similarity=0.399 Sum_probs=177.5
Q ss_pred cccCCCCCCCCccccchHHhhhc-CCCCCHHHHHHHHHHHHcCCCccCcEeecCCHHHHHHHHHHHhcCCCCCCCC---C
Q 012222 154 QWRDKRPVKSLVVGRPILLALED-IDGGPSFLEKALRFLEKFGTKVEGILRQAADVEEVDRRVQEYEQGKTEFSAD---E 229 (468)
Q Consensus 154 ~~~~~~~~~~~vFG~~L~~~~~~-~~~vP~il~~~i~~L~~~gl~~eGIFR~~g~~~~v~~l~~~~~~g~~~~~~~---~ 229 (468)
.++.+...+.++||+||+.++++ +..||.+|.+|+++|+++|+.+|||||++|+..++++|++.+++|....... .
T Consensus 8 ~l~~~~~~~~~vFG~~L~~~~~~~~~~vP~~v~~~i~~l~~~gl~~eGIfR~~G~~~~i~~L~~~~~~~~~~~~~~~~~~ 87 (214)
T 3byi_A 8 TLQEKGLIKDQIFGSHLHKVCERENSTVPWFVKQCIEAVEKRGLDVDGIYRVSGNLATIQKLRFIVNQEEKLNLDDSQWE 87 (214)
T ss_dssp HHHHHTSCCCCSTTSCHHHHHHHHTCSSCHHHHHHHHHHHHHTTTSTTTTTSCCCHHHHHHHHHHHHTTCCCCTTSGGGC
T ss_pred hHHhcCCCcCCccCCcHHHHHHHcCCCCChHHHHHHHHHHHhCCCCCCccccCCCHHHHHHHHHHHhcCCCCCCCccccc
Confidence 34455667789999999999975 5679999999999999999999999999999999999999999986433322 5
Q ss_pred ChhHHHHHHHHHHhhCCCCCCChhhHHHHHHHHhcCCHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHhhhccCCC
Q 012222 230 DAHVIGDCVKHVLRELPSSPVPASCCTALLEAYKIDRKEARISAMRSAILETFPEPNRRLLQRILRMMHTISSHAHENRM 309 (468)
Q Consensus 230 d~~~va~llK~fLr~LP~pLl~~~~~~~~~~~~~~~~~~~~i~~l~~li~~~LP~~n~~~L~~L~~~L~~V~~~s~~NkM 309 (468)
|+|+||++||.|||+||+||+|.++|+.|+.+....+.++++..++.++ .+||+.|+.+|+||+.||++|++|++.|||
T Consensus 88 dvh~va~lLK~flreLPePLl~~~l~~~~~~~~~~~~~~~~~~~l~~ll-~~LP~~n~~~L~~L~~~L~~v~~~s~~NkM 166 (214)
T 3byi_A 88 DIHVVTGALKMFFRELPEPLFPYSFFEQFVEAIKKQDNNTRIEAVKSLV-QKLPPPNRDTMKVLFGHLTKIVAKASKNLM 166 (214)
T ss_dssp SHHHHHHHHHHHHHHSSSCSSCHHHHHHHHHHHTSSSHHHHHHHHHHHH-HHSCHHHHHHHHHHHHHHHHHHHTHHHHCC
T ss_pred chHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHHHHHcccCCCC
Confidence 9999999999999999999999999999999999999999999999966 699999999999999999999999999999
Q ss_pred CccccchhccccccCCCCCCCCccccccccCCCcHHHHHHHHHHhHHHHHHHHHHHhcccccCCCC
Q 012222 310 TPSAVAACMAPLLLRPLLAGECELEDDFDMNGDNSAQLLAAANAANNAQAIIATLLEEYENIFDDE 375 (468)
Q Consensus 310 ~~~nLA~vfaP~Ll~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~iv~~lI~~~~~iF~~~ 375 (468)
++.|||+||||+|+|++.... +. +..+..++.+|++||+||+.||+++
T Consensus 167 ~~~NLa~vf~P~Ll~~~~~~~------------~~------~~~~~~~~~vve~LI~~~~~iF~~d 214 (214)
T 3byi_A 167 STQSLGIVFGPTLLRAENETG------------NM------AIHMVYQNQIAELMLSEYSKIFGSE 214 (214)
T ss_dssp CHHHHHHHHHHHHHCCTTSSS------------CH------HHHHHHHHHHHHHHHHTHHHHHC--
T ss_pred CHHHhHHHhccccCCCCCccH------------HH------HHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 999999999999999874211 11 1124556789999999999999864
No 2
>2ee4_A RHO GTPase activating protein 5 variant; all alpha protein, GTPase-activating protein for RHO family members, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2ee5_A
Probab=100.00 E-value=7e-45 Score=340.10 Aligned_cols=198 Identities=22% Similarity=0.381 Sum_probs=176.4
Q ss_pred CCCCccccchHHhhhcCCCCCHHHHHHHHHHHHcCCCccCcEeecCCHHHHHHHHHHHhcCCCCCC--CCCChhHHHHHH
Q 012222 161 VKSLVVGRPILLALEDIDGGPSFLEKALRFLEKFGTKVEGILRQAADVEEVDRRVQEYEQGKTEFS--ADEDAHVIGDCV 238 (468)
Q Consensus 161 ~~~~vFG~~L~~~~~~~~~vP~il~~~i~~L~~~gl~~eGIFR~~g~~~~v~~l~~~~~~g~~~~~--~~~d~~~va~ll 238 (468)
.++++||+||+.++.....||.+|.+|+++|+++|+.+|||||++|+..+++++++.|++|..... .+.|+|+||++|
T Consensus 8 ~~~~~FG~~L~~~~~~~~~vP~iv~~~i~~l~~~gl~~eGIfR~~g~~~~i~~l~~~~~~~~~~~~~~~~~d~~~va~lL 87 (209)
T 2ee4_A 8 WESNYFGMPLQDLVTAEKPIPLFVEKCVEFIEDTGLCTEGLYRVSGNKTDQDNIQKQFDQDHNINLVSMEVTVNAVAGAL 87 (209)
T ss_dssp SCCSSSSSCHHHHSCSSCCSCHHHHHHHHHHHHTCSCCTTTTTSCCCHHHHHHHHHHHHHCTTCCHHHHTCCHHHHHHHH
T ss_pred CCCCeeCCcHHHHHhcCCCCChHHHHHHHHHHHhCCCCCCccccCCCHHHHHHHHHHHhcCCCCCcccCCCCHHHHHHHH
Confidence 456799999999998878899999999999999999999999999999999999999999854322 247999999999
Q ss_pred HHHHhhCCCCCCChhhHHHHHHHHhcCCHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHhhhccCCCCccccchhc
Q 012222 239 KHVLRELPSSPVPASCCTALLEAYKIDRKEARISAMRSAILETFPEPNRRLLQRILRMMHTISSHAHENRMTPSAVAACM 318 (468)
Q Consensus 239 K~fLr~LP~pLl~~~~~~~~~~~~~~~~~~~~i~~l~~li~~~LP~~n~~~L~~L~~~L~~V~~~s~~NkM~~~nLA~vf 318 (468)
|.|||+||+||+|.++|+.|+++.+..+.++++..++.++ .+||+.|+.+|+||+.||++|+++++.|||++.|||+||
T Consensus 88 K~flreLPePLi~~~l~~~~~~~~~~~~~~~~~~~l~~ll-~~LP~~n~~~L~~L~~~L~~V~~~~~~NkM~~~NLaivf 166 (209)
T 2ee4_A 88 KAFFADLPDPLIPYSLHPELLEAAKIPDKTERLHALKEIV-KKFHPVNYDVFRYVITHLNRVSQQHKINLMTADNLSICF 166 (209)
T ss_dssp HHHHHHSSSCSSCTTTHHHHHHHHSCSSHHHHHHHHHHHT-TTSCTTHHHHHHHHHHHHHHHHHTHHHHCCCHHHHHHHH
T ss_pred HHHHHhCCCccCCHHHHHHHHHHHhCCCHHHHHHHHHHHH-HHCCHHHHHHHHHHHHHHHHHHhcccccCCCHHHHHHHh
Confidence 9999999999999999999999999999999999999866 799999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCccccccccCCCcHHHHHHHHHHhHHHHHHHHHHHhcccccCCCCCc
Q 012222 319 APLLLRPLLAGECELEDDFDMNGDNSAQLLAAANAANNAQAIIATLLEEYENIFDDESL 377 (468)
Q Consensus 319 aP~Ll~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~iv~~lI~~~~~iF~~~~~ 377 (468)
||+|+|++..+...+.+ +...+.+|++||+||+.||+++..
T Consensus 167 ~P~L~~~~~~~~~~l~~------------------~~~~~~vve~LI~~~~~iF~~~~~ 207 (209)
T 2ee4_A 167 WPTLMRPDFENREFLST------------------TKIHQSVVETFIQQCQFFFYNGEI 207 (209)
T ss_dssp HHHHSCCCCCSSCCSCC------------------CTTHHHHHHHHHHTHHHHTTCCCC
T ss_pred cccccCCCCccHHHHHH------------------hHHHHHHHHHHHHhhHHHcCCCCC
Confidence 99999987533211111 234568999999999999997653
No 3
>3msx_B RHO GTPase-activating protein 20; protein-proten complex, transition state, protein BI; HET: GDP; 1.65A {Homo sapiens}
Probab=100.00 E-value=7.8e-45 Score=337.90 Aligned_cols=196 Identities=25% Similarity=0.403 Sum_probs=173.5
Q ss_pred CCCCCCccccchHHhhhcCCCCCHHHHHHHHHHHHcCCCccCcEeecCCHHHHHHHHHHHhcCCCCCCCCCChhHHHHHH
Q 012222 159 RPVKSLVVGRPILLALEDIDGGPSFLEKALRFLEKFGTKVEGILRQAADVEEVDRRVQEYEQGKTEFSADEDAHVIGDCV 238 (468)
Q Consensus 159 ~~~~~~vFG~~L~~~~~~~~~vP~il~~~i~~L~~~gl~~eGIFR~~g~~~~v~~l~~~~~~g~~~~~~~~d~~~va~ll 238 (468)
.+.++++||++|+.++++ ++||.+|.+|++||+++|+.+|||||++|+..+++++++.+++|........|+|+||++|
T Consensus 6 ~~~~~~vFG~~L~~~~~~-~~vP~~v~~~i~~l~~~gl~~eGIfR~~g~~~~i~~l~~~~~~~~~~~~~~~d~~~va~lL 84 (201)
T 3msx_B 6 SPMPGQLFGISLPNICEN-DNLPKPVLDMLFFLNQKGPLTKGIFRQSANVKSCRELKEKLNSGVEVHLDCESIFVIASVL 84 (201)
T ss_dssp ----CCCTTSCHHHHSGG-GCCCHHHHHHHHHHHHHGGGSTTTTTSCCCHHHHHHHHHHHHHTCCCCTTSSCHHHHHHHH
T ss_pred CCCCCCeeCCcHHHHhcC-CCCCHHHHHHHHHHHHhCCCCCCeeeeCCCHHHHHHHHHHhccCCCCCCCcccHHHHHHHH
Confidence 455788999999999875 5699999999999999999999999999999999999999999976666778999999999
Q ss_pred HHHHhhCCCCCCChhhHHHHHHHHhcCCHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHhhhccCCCCccccchhc
Q 012222 239 KHVLRELPSSPVPASCCTALLEAYKIDRKEARISAMRSAILETFPEPNRRLLQRILRMMHTISSHAHENRMTPSAVAACM 318 (468)
Q Consensus 239 K~fLr~LP~pLl~~~~~~~~~~~~~~~~~~~~i~~l~~li~~~LP~~n~~~L~~L~~~L~~V~~~s~~NkM~~~nLA~vf 318 (468)
|.|||+||+||+|.++|+.|+.+....+.++++..++.++ .+||+.|+.+|+||+.||++|++|++.||||+.|||+||
T Consensus 85 K~flreLp~pLl~~~l~~~~~~~~~~~~~~~~~~~~~~ll-~~LP~~n~~~L~~L~~~L~~v~~~~~~NkM~~~nLa~vf 163 (201)
T 3msx_B 85 KDFLRNIPGSIFSSDLYDHWVSVMDQGNDEEKINTVQRLL-DQLPRANVVLLRYLFGVLHNIEQHSSSNQMTAFNLAVCV 163 (201)
T ss_dssp HHHHHTSTTTTTTGGGHHHHHHGGGSSSHHHHHHHHHHHH-TTSCHHHHHHHHHHHHHHHHHHTTHHHHCCCHHHHHHHH
T ss_pred HHHHHhCCCCCCCHHHHHHHHHHHccccHHHHHHHHHHHH-HHCCHHHHHHHHHHHHHHHHHHhccccCCCChhhhhhhh
Confidence 9999999999999999999999999999999999999966 799999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCccccccccCCCcHHHHHHHHHHhHHHHHHHHHHHhcccccC
Q 012222 319 APLLLRPLLAGECELEDDFDMNGDNSAQLLAAANAANNAQAIIATLLEEYENIF 372 (468)
Q Consensus 319 aP~Ll~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~iv~~lI~~~~~iF 372 (468)
||+|+|++......+ .......++.+|++||+||+.||
T Consensus 164 ~P~ll~~~~~~~~~~----------------~~~~~~~~~~iv~~LI~~~~~IF 201 (201)
T 3msx_B 164 APSILWPPASSSPEL----------------ENEFTKKVSLLIQFLIENCLRIF 201 (201)
T ss_dssp HHHHCCCCTTSCHHH----------------HHHHHHHHHHHHHHHHHHHHHHC
T ss_pred hccccCCCCCCChHH----------------HHHHHHHHHHHHHHHHHhhHhhC
Confidence 999999985321111 11123456678999999999998
No 4
>3iug_A RHO/CDC42/RAC GTPase-activating protein RICS; structural genomics consortium (SGC), GAP, alternative splicing, cell junction, cell membrane; 1.77A {Homo sapiens}
Probab=100.00 E-value=3.2e-44 Score=340.22 Aligned_cols=210 Identities=20% Similarity=0.272 Sum_probs=167.8
Q ss_pred cccCCCCCCCCccccchHHhhhc-CCCCCHHHHHHHHHHHHcCCCccCcEeecCCHHHHHHHHHHHhcCCCCCCCC----
Q 012222 154 QWRDKRPVKSLVVGRPILLALED-IDGGPSFLEKALRFLEKFGTKVEGILRQAADVEEVDRRVQEYEQGKTEFSAD---- 228 (468)
Q Consensus 154 ~~~~~~~~~~~vFG~~L~~~~~~-~~~vP~il~~~i~~L~~~gl~~eGIFR~~g~~~~v~~l~~~~~~g~~~~~~~---- 228 (468)
.|+++...+.+|||++|+.++.+ +..||.+|.+|+++|+++|+ +|||||++|+..++++|++.|++|.......
T Consensus 10 ~~~~~~~~~~~vFG~~L~~~~~~~~~~vP~iv~~~i~~i~~~gl-~eGIfR~~G~~~~i~~L~~~~~~~~~~~~~~~~~~ 88 (229)
T 3iug_A 10 GRENLYFQGERVFGCDLGEHLLNSGFEVPQVLQSCTAFIERYGI-VDGIYRLSGVASNIQRLRHEFDSEHVPDLTKEPYV 88 (229)
T ss_dssp --------CCCSTTSCHHHHHHHHCCSSCHHHHHHHHHHHHHCC-STTTTTSCCCHHHHHHHHHHHHTTCCCCTTSTTTT
T ss_pred ccCCCCCCCCCeECcchHHHHHhcCCCCCHHHHHHHHHHHHcCC-CCCCeecCCcHHHHHHHHHHHhcCCCCCccccccc
Confidence 35566667889999999998875 45799999999999999999 8999999999999999999999986543322
Q ss_pred CChhHHHHHHHHHHhhCCCCCCChhhHHHHHHHHhcCCHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHhhhccCC
Q 012222 229 EDAHVIGDCVKHVLRELPSSPVPASCCTALLEAYKIDRKEARISAMRSAILETFPEPNRRLLQRILRMMHTISSHAHENR 308 (468)
Q Consensus 229 ~d~~~va~llK~fLr~LP~pLl~~~~~~~~~~~~~~~~~~~~i~~l~~li~~~LP~~n~~~L~~L~~~L~~V~~~s~~Nk 308 (468)
.|+|+||++||.|||+||+||||.++|+.|+++....+.++++..++.++ .+||+.|+.+|+||+.||++|+++++.||
T Consensus 89 ~dvh~va~lLK~fLreLPePLl~~~ly~~~~~~~~~~~~~~~~~~l~~ll-~~LP~~n~~~L~~L~~~L~~V~~~s~~Nk 167 (229)
T 3iug_A 89 QDIHSVGSLCKLYFRELPNPLLTYQLYEKFSDAVSAATDEERLIKIHDVI-QQLPPPHYRTLEFLMRHLSLLADYCSITN 167 (229)
T ss_dssp TCHHHHHHHHHHHHHHCSSCTTCTTTHHHHHHHHTSSSHHHHHHHHHHHH-TTSCHHHHHHHHHHHHHHHHHHTTHHHHC
T ss_pred cchHHHHHHHHHHHHHCCCCCcCHHHHHHHHHHHHcCCHHHHHHHHHHHH-HHCCHHHHHHHHHHHHHHHHHHhccCccC
Confidence 49999999999999999999999999999999999999999999999966 79999999999999999999999999999
Q ss_pred CCccccchhccccccCCCCCCCCccccccccCCCcHHHHHHHHHHhHHHHHHHHHHHhcccccCCCCCc
Q 012222 309 MTPSAVAACMAPLLLRPLLAGECELEDDFDMNGDNSAQLLAAANAANNAQAIIATLLEEYENIFDDESL 377 (468)
Q Consensus 309 M~~~nLA~vfaP~Ll~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~iv~~lI~~~~~iF~~~~~ 377 (468)
||+.|||+||||+|+|++...... ....+.......+..+|++||+||+.||+++..
T Consensus 168 M~~~NLAivf~P~Ll~~~~~~~~~------------~~~~~~~~~~~~~~~vve~LI~~~~~iF~~~~~ 224 (229)
T 3iug_A 168 MHAKNLAIVWAPNLLRSKQIESAC------------FSGTAAFMEVRIQSVVVEFILNHVDVLFSGRIS 224 (229)
T ss_dssp CCHHHHHHHHHHHHCCC-------------------------------CHHHHHHHHHTHHHHTC----
T ss_pred CChHHHHHHHhccccCCCcccccc------------cchHHHHHHHHHHHHHHHHHHHhHHHhCCCcHH
Confidence 999999999999999987421100 001112233455678999999999999998753
No 5
>1tx4_A P50-rhogap; complex (GTPase activation/proto-oncogene), GTPase, transition state, GAP; HET: GDP; 1.65A {Homo sapiens} SCOP: a.116.1.1 PDB: 1am4_A* 1grn_B*
Probab=100.00 E-value=5.8e-44 Score=331.07 Aligned_cols=193 Identities=24% Similarity=0.336 Sum_probs=170.4
Q ss_pred CCCCCCccccchHHhhhcCC---CCCHHHHHHHHHHHHcCCCccCcEeecCCHHHHHHHHHHHhcCCCCCCC-CCChhHH
Q 012222 159 RPVKSLVVGRPILLALEDID---GGPSFLEKALRFLEKFGTKVEGILRQAADVEEVDRRVQEYEQGKTEFSA-DEDAHVI 234 (468)
Q Consensus 159 ~~~~~~vFG~~L~~~~~~~~---~vP~il~~~i~~L~~~gl~~eGIFR~~g~~~~v~~l~~~~~~g~~~~~~-~~d~~~v 234 (468)
++.+.++||+||+.++++.+ .||.+|.+|+++|+++|+.+|||||++|+..+++++++.+++|...... ..|+|++
T Consensus 2 ~~~~~~vFG~~L~~~~~~~~~~~~vP~iv~~~i~~l~~~gl~~eGIfR~~g~~~~i~~l~~~~~~~~~~~~~~~~d~~~~ 81 (198)
T 1tx4_A 2 PPLPNQQFGVSLQHLQEKNPEQEPIPIVLRETVAYLQAHALTTEGIFRRSANTQVVREVQQKYNMGLPVDFDQYNALHLP 81 (198)
T ss_dssp -CCTTCCTTSCHHHHHHHSTTCCSSCHHHHHHHHHHHHHCTTCTTTTTSCCCHHHHHHHHHHHHTTCCCCGGGSSCTHHH
T ss_pred CCCCCCccCCcHHHHHhhCCCCCCCCHHHHHHHHHHHHhCCCCCCeeecCCcHHHHHHHHHHHhCCCCCCccccccchHH
Confidence 45678899999999998653 6999999999999999999999999999999999999999999654433 3589999
Q ss_pred HHHHHHHHhhCCCCCCChhhHHHHHHHHhcCCHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHhhhccCCCCcccc
Q 012222 235 GDCVKHVLRELPSSPVPASCCTALLEAYKIDRKEARISAMRSAILETFPEPNRRLLQRILRMMHTISSHAHENRMTPSAV 314 (468)
Q Consensus 235 a~llK~fLr~LP~pLl~~~~~~~~~~~~~~~~~~~~i~~l~~li~~~LP~~n~~~L~~L~~~L~~V~~~s~~NkM~~~nL 314 (468)
|++||.|||+||+||+|.++|+.|+++... +.++++..++.++ .+||+.|+.+|+||+.||++|++|++.|||++.||
T Consensus 82 a~lLK~flreLpePLi~~~l~~~~~~~~~~-~~~~~~~~l~~ll-~~LP~~n~~~L~~L~~~L~~v~~~~~~NkM~~~nL 159 (198)
T 1tx4_A 82 AVILKTFLRELPEPLLTFDLYPHVVGFLNI-DESQRVPATLQVL-QTLPEENYQVLRFLTAFLVQISAHSDQNKMTNTNL 159 (198)
T ss_dssp HHHHHHHHHHSSSCTTCGGGHHHHHTGGGS-CGGGHHHHHHHHH-TTSCHHHHHHHHHHHHHHHHHHHTHHHHCCCHHHH
T ss_pred HHHHHHHHHHCCCcCCCHHHHHHHHHHHcC-CHHHHHHHHHHHH-HHCCHHHHHHHHHHHHHHHHHHhccCCCCCCHHHH
Confidence 999999999999999999999999997764 4578899999865 79999999999999999999999999999999999
Q ss_pred chhccccccCCCCCCCCccccccccCCCcHHHHHHHHHHhHHHHHHHHHHHhcccccC
Q 012222 315 AACMAPLLLRPLLAGECELEDDFDMNGDNSAQLLAAANAANNAQAIIATLLEEYENIF 372 (468)
Q Consensus 315 A~vfaP~Ll~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~iv~~lI~~~~~iF 372 (468)
|+||||+|+|++.. . .........+.+|++||+||+.||
T Consensus 160 a~vf~P~Ll~~~~~---------------~----~~~~~~~~~~~~v~~LI~~~~~iF 198 (198)
T 1tx4_A 160 AVVFGPNLLWAKDA---------------A----ITLKAINPINTFTKFLLDHQGELF 198 (198)
T ss_dssp HHHHHHHHCCCSSH---------------H----HHHHTHHHHHHHHHHHHHTHHHHC
T ss_pred HhhhcccccCCCCc---------------c----ccHHHHHHHHHHHHHHHHhHHHhC
Confidence 99999999998731 0 112334567889999999999998
No 6
>1f7c_A Rhogap protein; GTPase activating protein, RHO GTPase regulator, BH domain, signaling protein; 2.40A {Gallus gallus} SCOP: a.116.1.1
Probab=100.00 E-value=4.1e-44 Score=339.64 Aligned_cols=195 Identities=23% Similarity=0.324 Sum_probs=155.7
Q ss_pred CccccchHHhhhcCC----CCCHHHHHHHHHHHHcCCCccCcEeecCCHHHHHHHHH-HHhcCC---CCCC--CCCChhH
Q 012222 164 LVVGRPILLALEDID----GGPSFLEKALRFLEKFGTKVEGILRQAADVEEVDRRVQ-EYEQGK---TEFS--ADEDAHV 233 (468)
Q Consensus 164 ~vFG~~L~~~~~~~~----~vP~il~~~i~~L~~~gl~~eGIFR~~g~~~~v~~l~~-~~~~g~---~~~~--~~~d~~~ 233 (468)
+|||+||...+++.. .+|.+|.+|++||+++|+.+|||||++|+..+++++++ .+|+|. ..+. ...|+|+
T Consensus 17 pvfgvpl~~~~~~~~~l~~~~p~iv~~ci~~le~~gl~~eGIfR~sG~~~~v~~l~~~~~d~~~~~~~~l~~~~~~dvh~ 96 (231)
T 1f7c_A 17 PVYNSNKDNQSEGTAQLDSIGFSIIKKCIHAVETRGINEQGLYRIVGVNSRVQKLLSILMDPKTATETETEICAEWEIKT 96 (231)
T ss_dssp --------------CCSSHHHHHHHHHHHHHHHHHCTTCTTTTTSCCCHHHHHHHHHHHHCC------CCCCCTTSCHHH
T ss_pred CccCCcchhccccccccCCcCccHHHHHHHHHHHhCCCCCCeeeeCCcHHHHHHHHHHHhCcCCCcccCccccccccHHH
Confidence 499999998887543 37899999999999999999999999999999999987 578763 1222 2479999
Q ss_pred HHHHHHHHHhhCCCCCCChhhHHHHHHHHhcCCHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHhhhccCCCCccc
Q 012222 234 IGDCVKHVLRELPSSPVPASCCTALLEAYKIDRKEARISAMRSAILETFPEPNRRLLQRILRMMHTISSHAHENRMTPSA 313 (468)
Q Consensus 234 va~llK~fLr~LP~pLl~~~~~~~~~~~~~~~~~~~~i~~l~~li~~~LP~~n~~~L~~L~~~L~~V~~~s~~NkM~~~n 313 (468)
||++||.|||+||+||||.++|+.|+.+....+.++++..++.++ .+||+.|+.+|+||+.||++|++|++.|||++.|
T Consensus 97 va~lLK~flReLPePLl~~~ly~~~~~~~~~~~~~~r~~~l~~ll-~~LP~~n~~~L~~L~~~L~~V~~~s~~NkM~~~N 175 (231)
T 1f7c_A 97 ITSALKTYLRMLPGPLMMYQFQRSFIKAAKLENQESRVSEIHSLV-HRLPEKNRQMLHLLMNHLAKVADNHKQNLMTVAN 175 (231)
T ss_dssp HHHHHHHHHHTSSSCTTCHHHHHHHHHHHTCSSHHHHHHHHHHHH-TTSCHHHHHHHHHHHHHHHHHHHTHHHHCCCHHH
T ss_pred HHHHHHHHHHHCCCCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHH-HHCCHHHHHHHHHHHHHHHHHHhcCCCCCCCHHH
Confidence 999999999999999999999999999999999999999999966 7999999999999999999999999999999999
Q ss_pred cchhccccccCCCCCCCCccccccccCCCcHHHHHHHHHHhHHHHHHHHHHHhcccccCCCCCc
Q 012222 314 VAACMAPLLLRPLLAGECELEDDFDMNGDNSAQLLAAANAANNAQAIIATLLEEYENIFDDESL 377 (468)
Q Consensus 314 LA~vfaP~Ll~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~iv~~lI~~~~~iF~~~~~ 377 (468)
||+||||+|+|++..+...+ .....++.+|++||+||+.||++...
T Consensus 176 LAivf~P~Ll~~~~~~~~~~------------------~~~~~~~~vve~LI~~~~~iF~~~~~ 221 (231)
T 1f7c_A 176 LGVVFGPTLLRPQEETVAAI------------------MDIKFQNIVIEILIENHEKIFNTVPE 221 (231)
T ss_dssp HHHHHHHHHSCC---CCSGG------------------GGHHHHHHHHHHHHHTHHHHHHSCCC
T ss_pred HHHHhccccCCCCcccHHHH------------------HHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 99999999999875321111 12445678999999999999998653
No 7
>2osa_A N-chimaerin; RHO-GAP, GTPase activation, structural genomics, structural genomics consortium, SGC, signaling protein; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.2e-43 Score=330.00 Aligned_cols=192 Identities=18% Similarity=0.329 Sum_probs=171.3
Q ss_pred CCccccchHHhhhc-CCCCCHHHHHHHHHHHHcCCCccCcEeecCCHHHHHHHHHHHhcC-CC-CCC--CCCChhHHHHH
Q 012222 163 SLVVGRPILLALED-IDGGPSFLEKALRFLEKFGTKVEGILRQAADVEEVDRRVQEYEQG-KT-EFS--ADEDAHVIGDC 237 (468)
Q Consensus 163 ~~vFG~~L~~~~~~-~~~vP~il~~~i~~L~~~gl~~eGIFR~~g~~~~v~~l~~~~~~g-~~-~~~--~~~d~~~va~l 237 (468)
.++||+||+.++++ +..||.+|.+|+++|+++|+.+|||||++|+..+++++++.++++ .. .+. ...|+|+||++
T Consensus 6 ~~vFG~~L~~~~~~~~~~vP~iv~~~i~~l~~~gl~~eGIfR~~g~~~~i~~l~~~~~~~~~~~d~~~~~~~d~~~va~l 85 (202)
T 2osa_A 6 KKVYSCDLTTLVKAHTTKRPMVVDMCIREIESRGLNSEGLYRVSGFSDLIEDVKMAFDRDGEKADISVNMYEDINIITGA 85 (202)
T ss_dssp -CCTTSCHHHHHHHHTCSSCHHHHHHHHHHHHHCTTSTTTTTSCCCHHHHHHHHHHHHHHGGGCCCSTTTCCCHHHHHHH
T ss_pred CCccCCChHHHHHHcCCCCCcHHHHHHHHHHHhCCCcCCeeeecCcHHHHHHHHHHHHcCCCccCCCccccccHHHHHHH
Confidence 56999999999976 456999999999999999999999999999999999999999985 32 222 23699999999
Q ss_pred HHHHHhhCCCCCCChhhHHHHHHHHhcCCHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHhhhccCCCCccccchh
Q 012222 238 VKHVLRELPSSPVPASCCTALLEAYKIDRKEARISAMRSAILETFPEPNRRLLQRILRMMHTISSHAHENRMTPSAVAAC 317 (468)
Q Consensus 238 lK~fLr~LP~pLl~~~~~~~~~~~~~~~~~~~~i~~l~~li~~~LP~~n~~~L~~L~~~L~~V~~~s~~NkM~~~nLA~v 317 (468)
||.|||+||+||+|.++|+.|+.+.+..+.++++..++.++ .+||+.|+.+|+||+.||++|++|++.||||+.|||+|
T Consensus 86 LK~flreLpePLl~~~~~~~~~~~~~~~~~~~~~~~l~~ll-~~LP~~n~~~L~~L~~~L~~v~~~~~~NkM~~~NLa~v 164 (202)
T 2osa_A 86 LKLYFRDLPIPLITYDAYPKFIESAKIMDPDEQLETLHEAL-KLLPPAHCETLRYLMAHLKRVTLHEKENLMNAENLGIV 164 (202)
T ss_dssp HHHHHHTCSSCSSCTTTHHHHHHHHHCCSHHHHHHHHHHHH-HTSCHHHHHHHHHHHHHHHHHHHTHHHHCCCHHHHHHH
T ss_pred HHHHHHhCCCccCCHHHHHHHHHHHhcCCHHHHHHHHHHHH-HHCCHHHHHHHHHHHHHHHHHhccccCCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999966 79999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCCCccccccccCCCcHHHHHHHHHHhHHHHHHHHHHHhcccccC
Q 012222 318 MAPLLLRPLLAGECELEDDFDMNGDNSAQLLAAANAANNAQAIIATLLEEYENIF 372 (468)
Q Consensus 318 faP~Ll~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~iv~~lI~~~~~iF 372 (468)
|||+|+|++..+ .+.....+..+..+|++||+||+.||
T Consensus 165 f~P~Ll~~~~~~-----------------~~~~~~~~~~~~~vve~LI~~~~~iF 202 (202)
T 2osa_A 165 FGPTLMRSPELD-----------------AMAALNDIRYQRLVVELLIKNEDILF 202 (202)
T ss_dssp HHHHHCCCCCCC-----------------HHHHHHHHHHHHHHHHHHHHTHHHHC
T ss_pred HccccCCCCCcc-----------------HHHHHHHHHHHHHHHHHHHHcccccC
Confidence 999999987421 12233456678899999999999998
No 8
>3fk2_A Glucocorticoid receptor DNA-binding factor 1; structural genomics consortium, GTPase-activating protein, SGC, alternative splicing, anti-oncogene; 2.80A {Homo sapiens}
Probab=100.00 E-value=6.9e-44 Score=341.09 Aligned_cols=196 Identities=23% Similarity=0.423 Sum_probs=175.4
Q ss_pred CCCCCccccchHHhhhcCCCCCHHHHHHHHHHHHcCCCccCcEeecCCHHHHHHHHHHHhcCCCCCC--CCCChhHHHHH
Q 012222 160 PVKSLVVGRPILLALEDIDGGPSFLEKALRFLEKFGTKVEGILRQAADVEEVDRRVQEYEQGKTEFS--ADEDAHVIGDC 237 (468)
Q Consensus 160 ~~~~~vFG~~L~~~~~~~~~vP~il~~~i~~L~~~gl~~eGIFR~~g~~~~v~~l~~~~~~g~~~~~--~~~d~~~va~l 237 (468)
..++.+||+||+.++...+.||.+|.+|+++|+++|+.+|||||++|+..+++.|++.|++|..... .+.|+|+||++
T Consensus 48 ~~~~~vFGv~L~~~~~~~~~vP~iv~~~i~~l~~~gl~~eGIFR~sG~~~~v~~L~~~~d~~~~~~~~~~~~dvh~va~l 127 (246)
T 3fk2_A 48 TWESNYFGVPLTTVVTPEKPIPIFIERCIEYIEATGLSTEGIYRVSGNKSEMESLQRQFDQDHNLDLAEKDFTVNTVAGA 127 (246)
T ss_dssp -CCCSSTTSCGGGGCCSSSCSCHHHHHHHHHHHHHCTTSTTTTTSCCCHHHHHHHHHHHHHCTTCCSGGGTCCHHHHHHH
T ss_pred ccCCCeeCCCHHHHhcCCCCCChHHHHHHHHHHHhCCCCCCeeEeCCcHHHHHHHHHHHhcCCCCCcccccCcHHHHHHH
Confidence 3467899999999998888899999999999999999999999999999999999999999864332 24699999999
Q ss_pred HHHHHhhCCCCCCChhhHHHHHHHHhcCCHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHhhhccCCCCccccchh
Q 012222 238 VKHVLRELPSSPVPASCCTALLEAYKIDRKEARISAMRSAILETFPEPNRRLLQRILRMMHTISSHAHENRMTPSAVAAC 317 (468)
Q Consensus 238 lK~fLr~LP~pLl~~~~~~~~~~~~~~~~~~~~i~~l~~li~~~LP~~n~~~L~~L~~~L~~V~~~s~~NkM~~~nLA~v 317 (468)
||.|||+||+||||.++|+.|+++....+.++++..++.++ .+||+.|+.+|.||+.||++|+++++.||||+.|||+|
T Consensus 128 LK~fLReLPePLl~~~l~~~~~~~~~~~~~~~~~~~l~~ll-~~LP~~n~~~L~~L~~~L~~V~~~s~~NkMt~~NLAiv 206 (246)
T 3fk2_A 128 MKSFFSELPDPLVPYNMQIDLVEAHKINDREQKLHALKEVL-KKFPKENHEVFKYVISHLNKVSHNNKVNLMTSENLSIC 206 (246)
T ss_dssp HHHHHHHSSSCSSCHHHHHHHHHHTTCCSHHHHHHHHHHHH-HTSCHHHHHHHHHHHHHHHHHHTTHHHHCCCHHHHHHH
T ss_pred HHHHHHhCCCccCCHHHHHHHHHHhccCCHHHHHHHHHHHH-HHCCHHHHHHHHHHHHHHHHHHhccCccCCchHHhHHH
Confidence 99999999999999999999999999999999999999966 69999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCCCccccccccCCCcHHHHHHHHHHhHHHHHHHHHHHhcccccCCC
Q 012222 318 MAPLLLRPLLAGECELEDDFDMNGDNSAQLLAAANAANNAQAIIATLLEEYENIFDD 374 (468)
Q Consensus 318 faP~Ll~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~iv~~lI~~~~~iF~~ 374 (468)
|||+|+|+...+. .+...+..++.+|++||+||+.||.+
T Consensus 207 f~P~Llrp~~~~~------------------~~~~~~~~~~~ive~LI~~~~~iF~n 245 (246)
T 3fk2_A 207 FWPTLMRPDFSTM------------------DALTATRTYQTIIELFIQQCPFFFYN 245 (246)
T ss_dssp HHHHHHCCCSSSS------------------CHHHHHHHHHHHHHHHHHTHHHHHC-
T ss_pred hcccccCCCCccH------------------HHHHHHHHHHHHHHHHHHhHHHhcCC
Confidence 9999999874211 11233556778999999999999985
No 9
>1ow3_A RHO-GTPase-activating protein 1; complex, GTPase, GAP, transition state, gene regulation/signaling protein complex; HET: GDP; 1.80A {Homo sapiens} SCOP: a.116.1.1 PDB: 1rgp_A 2ngr_B*
Probab=100.00 E-value=8.2e-43 Score=332.85 Aligned_cols=198 Identities=23% Similarity=0.343 Sum_probs=170.4
Q ss_pred CCCCCCCccccchHHhhhcCC---CCCHHHHHHHHHHHHcCCCccCcEeecCCHHHHHHHHHHHhcCCCCCCCC-CChhH
Q 012222 158 KRPVKSLVVGRPILLALEDID---GGPSFLEKALRFLEKFGTKVEGILRQAADVEEVDRRVQEYEQGKTEFSAD-EDAHV 233 (468)
Q Consensus 158 ~~~~~~~vFG~~L~~~~~~~~---~vP~il~~~i~~L~~~gl~~eGIFR~~g~~~~v~~l~~~~~~g~~~~~~~-~d~~~ 233 (468)
+.+.+.++||++|+.++++.+ .||.+|.+|+++|+++|+.+|||||++|+..+++++++.||+|....... .|+|+
T Consensus 37 ~~~~~~~vFG~~L~~~~~~~~~~~~vP~iv~~~i~~l~~~gl~~eGIfR~sG~~~~i~~L~~~~d~~~~~~~~~~~dv~~ 116 (242)
T 1ow3_A 37 RPPLPNQQFGVSLQHLQEKNPEQEPIPIVLRETVAYLQAHALTTEGIFRRSANTQVVREVQQKYNMGLPVDFDQYNELHL 116 (242)
T ss_dssp --CCTTCCSSSCHHHHHHHSTTCCSSCHHHHHHHHHHHHHCTTCTTTTTSCCCHHHHHHHHHHHHTTCCCCGGGSSCTHH
T ss_pred CCCCCCCccCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHcCCCCCceeeeCCcHHHHHHHHHHHhcCCCCCcccccchHH
Confidence 345678899999999998653 69999999999999999999999999999999999999999996544333 59999
Q ss_pred HHHHHHHHHhhCCCCCCChhhHHHHHHHHhcCCHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHhhhccCCCCccc
Q 012222 234 IGDCVKHVLRELPSSPVPASCCTALLEAYKIDRKEARISAMRSAILETFPEPNRRLLQRILRMMHTISSHAHENRMTPSA 313 (468)
Q Consensus 234 va~llK~fLr~LP~pLl~~~~~~~~~~~~~~~~~~~~i~~l~~li~~~LP~~n~~~L~~L~~~L~~V~~~s~~NkM~~~n 313 (468)
+|++||.|||+||+||+|.++|+.|+++... +.++++..++.++ .+||+.|+.+|+||+.||++|++|++.||||+.|
T Consensus 117 va~lLK~flReLPePLl~~~ly~~~~~~~~~-~~~~~~~~l~~ll-~~LP~~n~~~L~~L~~~L~~V~~~s~~NkM~~~N 194 (242)
T 1ow3_A 117 PAVILKTFLRELPEPLLTFDLYPHVVGFLNI-DESQRVPATLQVL-QTLPEENYQVLRFLTAFLVQISAHSDQNKMTNTN 194 (242)
T ss_dssp HHHHHHHHHHHSSSCTTCGGGHHHHHTGGGS-CGGGHHHHHHHHH-TTSCHHHHHHHHHHHHHHHHHHHTHHHHCCCHHH
T ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHHHHcC-CHHHHHHHHHHHH-HHCCHHHHHHHHHHHHHHHHHHhccCcCCCCHHH
Confidence 9999999999999999999999999997764 4578899999865 7999999999999999999999999999999999
Q ss_pred cchhccccccCCCCCCCCccccccccCCCcHHHHHHHHHHhHHHHHHHHHHHhcccccCCCCC
Q 012222 314 VAACMAPLLLRPLLAGECELEDDFDMNGDNSAQLLAAANAANNAQAIIATLLEEYENIFDDES 376 (468)
Q Consensus 314 LA~vfaP~Ll~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~iv~~lI~~~~~iF~~~~ 376 (468)
||+||||+|+|++.. . ........++.+|++||+||+.||++..
T Consensus 195 LAivf~P~Ll~~~~~---------------~----~~~~~~~~~~~~v~~LI~~~~~iF~~~~ 238 (242)
T 1ow3_A 195 LAVVFGPNLLWAKDA---------------A----ITLKAINPINTFTKFLLDHQGELFPSPD 238 (242)
T ss_dssp HHHHHHHHHCCCSSH---------------H----HHHHTHHHHHHHHHHHHHTHHHHC----
T ss_pred hHHhhcchhCCCCCc---------------c----ccHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 999999999998731 0 1122345677899999999999998754
No 10
>1pbw_A Rhogap domain, phosphatidylinositol 3-kinase; phosphotransferase, tpase activating protein, CDC42, phosphoinositide 3-kinase, SH3 domain; 2.00A {Homo sapiens} SCOP: a.116.1.1
Probab=100.00 E-value=1.2e-42 Score=326.36 Aligned_cols=192 Identities=20% Similarity=0.254 Sum_probs=159.3
Q ss_pred CCccccchHHhhhcC---CCCCHHHHHHHHHHHHcCCCccCcEeecCCHHHHHHHHHHHhcCC-CCCCCCCChhHHHHHH
Q 012222 163 SLVVGRPILLALEDI---DGGPSFLEKALRFLEKFGTKVEGILRQAADVEEVDRRVQEYEQGK-TEFSADEDAHVIGDCV 238 (468)
Q Consensus 163 ~~vFG~~L~~~~~~~---~~vP~il~~~i~~L~~~gl~~eGIFR~~g~~~~v~~l~~~~~~g~-~~~~~~~d~~~va~ll 238 (468)
..+||+||+.++++. ..||.+|.+|++||+++|+.+|||||++|+..+ ++|++.|++|. ......+|+|+||++|
T Consensus 5 ~~~fGv~L~~l~~~~~~~~~vP~iv~~~i~~l~~~gl~~eGIfR~sG~~~~-~~l~~~~d~~~~~~~~~~~dv~~va~lL 83 (216)
T 1pbw_A 5 VEQQALTLPDLAEQFAPPDIAPPLLIKLVEAIEKKGLECSTLYRTQSSSNL-AELRQLLDCDTPSVDLEMIDVHVLADAF 83 (216)
T ss_dssp -------CCCHHHHCCTTSCSCHHHHHHHHHHHHHHTTCTTTTSSCCSCCT-THHHHHSCSSSSCCCGGGBCHHHHHHHH
T ss_pred cccCCCcHHHHHhccCCCCCcCHHHHHHHHHHHHcCCCCCCeeeCCChHHH-HHHHHHHHcCCCCCCccccCHHHHHHHH
Confidence 458999999999853 469999999999999999999999999999999 99999999984 3344568999999999
Q ss_pred HHHHhhCCCCCCChhhHHHHHHHHh-cCCHHHHHHHHHHHHHh--cCChhHHHHHHHHHHHHHHHHhhhccCCCCccccc
Q 012222 239 KHVLRELPSSPVPASCCTALLEAYK-IDRKEARISAMRSAILE--TFPEPNRRLLQRILRMMHTISSHAHENRMTPSAVA 315 (468)
Q Consensus 239 K~fLr~LP~pLl~~~~~~~~~~~~~-~~~~~~~i~~l~~li~~--~LP~~n~~~L~~L~~~L~~V~~~s~~NkM~~~nLA 315 (468)
|.|||+||+||||.++|+.|+.+.+ ..+.++++..++.++ . +||+.|+.+|+||+.||++|++|++.|||++.|||
T Consensus 84 K~flReLPePLl~~~ly~~~~~~~~~~~~~~~~~~~l~~ll-~~~~LP~~n~~~L~~L~~~L~~V~~~~~~NkM~~~NLA 162 (216)
T 1pbw_A 84 KRYLLDLPNPVIPAAVYSEMISLAPEVQSSEEYIQLLKKLI-RSPSIPHQYWLTLQYLLKHFFKLSQTSSKNLLNARVLS 162 (216)
T ss_dssp HHHHHTSSSCSSCHHHHHHHHHHGGGCCSHHHHHHHHHHHH-TCTTSCHHHHHHHHHHHHHHHHHHHTHHHHCCCHHHHH
T ss_pred HHHHHhCCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHH-hhccCCHHHHHHHHHHHHHHHHHHhcccccCCCHHHHH
Confidence 9999999999999999999999986 677889999999855 7 89999999999999999999999999999999999
Q ss_pred hhccccccCCCCCCCCccccccccCCCcHHHHHHHHHHhHHHHHHHHHHHhcccccCCCCCc
Q 012222 316 ACMAPLLLRPLLAGECELEDDFDMNGDNSAQLLAAANAANNAQAIIATLLEEYENIFDDESL 377 (468)
Q Consensus 316 ~vfaP~Ll~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~iv~~lI~~~~~iF~~~~~ 377 (468)
+||||+|+|++..+ .. . ...++.+|++||+||+.||+..+.
T Consensus 163 ivf~P~Ll~~~~~~--------------~~------~-~~~~~~vve~LI~~~~~iF~~~P~ 203 (216)
T 1pbw_A 163 EIFSPMLFRFSAAS--------------SD------N-TENLIKVIEILISTEWNERQPAPA 203 (216)
T ss_dssp HHHHHHHHTCSSCC--------------HH------H-HHHHHHHHHHHHHTTC--------
T ss_pred HHHhhhcCCCCCCc--------------hh------h-hHHHHHHHHHHHhhhHHhcCCCCC
Confidence 99999999998421 01 1 156788999999999999998743
No 11
>3kuq_A RHO GTPase-activating protein 7; structural genomics consortium, GTPase activation, SGC, alternative splicing, cytoplasm, phosphoprotein; 2.30A {Homo sapiens}
Probab=100.00 E-value=3.7e-41 Score=318.69 Aligned_cols=206 Identities=22% Similarity=0.347 Sum_probs=168.0
Q ss_pred CCCCccccchHHhhhc-CCCCCHHHHHHHHHHHHcCCCccCcEeecCCHHHHHHHHHHHhcC-CCCCCCCCChhHHHHHH
Q 012222 161 VKSLVVGRPILLALED-IDGGPSFLEKALRFLEKFGTKVEGILRQAADVEEVDRRVQEYEQG-KTEFSADEDAHVIGDCV 238 (468)
Q Consensus 161 ~~~~vFG~~L~~~~~~-~~~vP~il~~~i~~L~~~gl~~eGIFR~~g~~~~v~~l~~~~~~g-~~~~~~~~d~~~va~ll 238 (468)
..++|||+||+.++++ +..||.+|.+|++||+++|+.+|||||++|+..++++|++.++++ ........|+|+||++|
T Consensus 16 ~~~~vFGv~L~~~~~~~~~~vP~~v~~~i~~l~~~gl~~eGIfR~sG~~~~i~~L~~~~d~~~~~~~~~~~~~~~va~lL 95 (228)
T 3kuq_A 16 FQGSVFGVPLTVNVQRTGQPLPQSIQQAMRYLRNHCLDQVGLFRKSGVKSRIQALRQMNEGAIDCVNYEGQSAYDVADML 95 (228)
T ss_dssp CTTSSTTCCHHHHHHHHSSSSCHHHHHHHHHHHHHCTTSTTTTTSCCCHHHHHHHHHHHTBSSSCCCCTTCCHHHHHHHH
T ss_pred CCCCEECCchHHHHHHcCCCCCHHHHHHHHHHHHhCCCcCCeeecCCCHHHHHHHHHHHhcCCCcCCcccCCHHHHHHHH
Confidence 3567999999999875 567999999999999999999999999999999999999999875 34455678999999999
Q ss_pred HHHHhhCCCCCCChhhHHHHHHHHhcCCHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHhhhccCCCCccccchhc
Q 012222 239 KHVLRELPSSPVPASCCTALLEAYKIDRKEARISAMRSAILETFPEPNRRLLQRILRMMHTISSHAHENRMTPSAVAACM 318 (468)
Q Consensus 239 K~fLr~LP~pLl~~~~~~~~~~~~~~~~~~~~i~~l~~li~~~LP~~n~~~L~~L~~~L~~V~~~s~~NkM~~~nLA~vf 318 (468)
|.|||+||+||||.++|+.|+.+.+..+.++++..++.++ .+||+.|+.+|+||+.||++|+++++.||||+.|||+||
T Consensus 96 K~fLReLPePLl~~~l~~~~~~~~~~~~~~~~~~~l~~ll-~~LP~~n~~~L~~L~~~L~~V~~~s~~NkM~~~NLAivf 174 (228)
T 3kuq_A 96 KQYFRDLPEPLMTNKLSETFLQIYQYVPKDQRLQAIKAAI-MLLPDENREVLQTLLYFLSDVTAAVKENQMTPTNLAVCL 174 (228)
T ss_dssp HHHHHHSSSCTTCSSHHHHHHHHHHHSCGGGHHHHHHHHH-HTSCHHHHHHHHHHHHHHHHHHHTHHHHCCCHHHHHHHH
T ss_pred HHHHHhCCCCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHHHHHhccccCCchhHhHHHH
Confidence 9999999999999999999999999888889999999966 699999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCccccccc-----cCCCcHHHHHHHHHHhHHHHHHHHHHHhccccc
Q 012222 319 APLLLRPLLAGECELEDDFD-----MNGDNSAQLLAAANAANNAQAIIATLLEEYENI 371 (468)
Q Consensus 319 aP~Ll~~~~~~~~~~e~~~~-----~~~~~~~~~~~~~~~~~~~~~iv~~lI~~~~~i 371 (468)
||+|||+........ ++.. ..+... .........+..++.+||+||+.|
T Consensus 175 ~P~Ll~~~~~~~~s~-~~~~~~r~~~~~~~~---~~~l~e~~aa~~~l~~mi~~~~~l 228 (228)
T 3kuq_A 175 APSLFHLNTLKRENS-SPRVMQRKQSLGKPD---QKDLNENLAATQGLAHMIAECKKL 228 (228)
T ss_dssp HHHHHTCCCC--------------------C---HHHHHHHHHHHHHHHHHHHC----
T ss_pred hhhhcCCCCCCCCCC-CcchhhhccccCCCc---HHHHHHHHHHHHHHHHHHHHhhcC
Confidence 999999875432111 1110 001111 112333445678999999999875
No 12
>2ovj_A Mgcracgap, RAC GTPase-activating protein 1; signaling protein, structural genomics, structural genomics consortium, SGC; HET: 7PE; 1.49A {Homo sapiens}
Probab=100.00 E-value=1e-40 Score=309.78 Aligned_cols=190 Identities=18% Similarity=0.257 Sum_probs=166.1
Q ss_pred cchHHhhhc-CCCCCHHHHHHHHHHHHcCCCccCcEeecCCHHHHHHHHHHHhcCCC-CCCCC-CChhHHHHHHHHHHhh
Q 012222 168 RPILLALED-IDGGPSFLEKALRFLEKFGTKVEGILRQAADVEEVDRRVQEYEQGKT-EFSAD-EDAHVIGDCVKHVLRE 244 (468)
Q Consensus 168 ~~L~~~~~~-~~~vP~il~~~i~~L~~~gl~~eGIFR~~g~~~~v~~l~~~~~~g~~-~~~~~-~d~~~va~llK~fLr~ 244 (468)
..|++++.+ ...||.+|.+|+++|+++|+.+|||||++|+..++++|++.|++|.. ..... .|+|+||++||.|||+
T Consensus 4 g~L~~~~~~~~~~vP~iv~~~i~~l~~~gl~~eGIfR~sG~~~~i~~L~~~~~~~~~~~~~~~~~d~h~va~lLK~flre 83 (201)
T 2ovj_A 4 GMLADFVSQTSPMIPSIVVHCVNEIEQRGLTETGLYRISGCDRTVKELKEKFLRVKTVPLLSKVDDIHAICSLLKDFLRN 83 (201)
T ss_dssp CCGGGGCCSSSSCCCHHHHHHHHHHHHHTTTSTTTTTSCCCHHHHHHHHHHHHTTCSCCCGGGCCCHHHHHHHHHHHHHT
T ss_pred CcHHHHhcccCCCCChHHHHHHHHHHHhCCCcCceeeeCCcHHHHHHHHHHHHcCCCCccccccCCHHHHHHHHHHHHHh
Confidence 456666654 45699999999999999999999999999999999999999999954 33334 4999999999999999
Q ss_pred CCCCCCChhhHHHHHHHHhcCCHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHhhhccCCCCccccchhccccccC
Q 012222 245 LPSSPVPASCCTALLEAYKIDRKEARISAMRSAILETFPEPNRRLLQRILRMMHTISSHAHENRMTPSAVAACMAPLLLR 324 (468)
Q Consensus 245 LP~pLl~~~~~~~~~~~~~~~~~~~~i~~l~~li~~~LP~~n~~~L~~L~~~L~~V~~~s~~NkM~~~nLA~vfaP~Ll~ 324 (468)
||+||+|.++|+.|+++.+..+.++++..++.++ .+||+.|+.+|+||+.||++|+++ +.|||++.|||+||||+|+|
T Consensus 84 LpePLi~~~l~~~~~~~~~~~~~~~~~~~l~~ll-~~LP~~n~~~L~~L~~~L~~V~~~-~~NkM~~~NLa~vf~P~ll~ 161 (201)
T 2ovj_A 84 LKEPLLTFRLNRAFMEAAEITDEDNSIAAMYQAV-GELPQANRDTLAFLMIHLQRVAQS-PHTKMDVANLAKVFGPTIVA 161 (201)
T ss_dssp SSSCTTCTTTHHHHHHHHHCSSHHHHHHHHHHHH-HTSCHHHHHHHHHHHHHHHHHHHC-TTSCCCHHHHHHHHHHHHTC
T ss_pred CCCCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHH-HHCCHHHHHHHHHHHHHHHHHHcc-cccCCCHHHHHHHhhhhhcC
Confidence 9999999999999999999999999999999966 799999999999999999999996 68999999999999999999
Q ss_pred CCCCCCCccccccccCCCcHHHHHHHHHHhHHHHHHHHHHHhcccccCCC
Q 012222 325 PLLAGECELEDDFDMNGDNSAQLLAAANAANNAQAIIATLLEEYENIFDD 374 (468)
Q Consensus 325 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~iv~~lI~~~~~iF~~ 374 (468)
++..+. + .++....+..+..+|++||+||+.||+.
T Consensus 162 ~~~~~~-----------~----~~~~~~~~~~~~~vv~~LI~~~~~if~~ 196 (201)
T 2ovj_A 162 HAVPNP-----------D----PVTMLQDIKRQPKVVERLLSLPLEYWSQ 196 (201)
T ss_dssp CSSSSC-----------C----HHHHHHHHHHHHHHHHHHHHSCHHHHHG
T ss_pred CCCCCC-----------C----HHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 874211 1 1233445677889999999999999985
No 13
>3eap_A RHO GTPase-activating protein 11A; GAP, structural genomics consortium, GTPase activation, phosphoprotein, polymorphism hydrolase activator, SGC; 2.30A {Homo sapiens}
Probab=100.00 E-value=4.8e-40 Score=318.53 Aligned_cols=200 Identities=22% Similarity=0.280 Sum_probs=158.1
Q ss_pred CCCCCCccccchHHhhhc----CCCCCHHHHHHHHHHHHcCCCccCcEeecCCHHHHHHHHHHHhcCCCCCCCCCChhHH
Q 012222 159 RPVKSLVVGRPILLALED----IDGGPSFLEKALRFLEKFGTKVEGILRQAADVEEVDRRVQEYEQGKTEFSADEDAHVI 234 (468)
Q Consensus 159 ~~~~~~vFG~~L~~~~~~----~~~vP~il~~~i~~L~~~gl~~eGIFR~~g~~~~v~~l~~~~~~g~~~~~~~~d~~~v 234 (468)
.+.++++||+||+.+++. .+.||.+|.+|+.+|++ |+.+|||||++|+...+++|++.||+|... ....|+|+|
T Consensus 58 ~~~~~~vFGv~L~~l~~~~~~~~~~iP~~l~~~~~~le~-gl~~eGIfR~sG~~~~i~~L~~~~d~~~~~-~~~~~~~~v 135 (271)
T 3eap_A 58 TEIGGKIFGVPFNALPHSAVPEYGHIPSFLVDACTSLED-HIHTEGLFRKSGSVIRLKALKNKVDHGEGC-LSSAPPCDI 135 (271)
T ss_dssp ---CCSSTTSCGGGSCEEEETTTEEEEHHHHHHHHHHGG-GTTC--------CHHHHHHHHHHHHHC------CCCHHHH
T ss_pred CCCCCCeeCCcHHHHHhhccCCCCCcChHHHHHHHHHHh-CCCCCCeeeeCCCHHHHHHHHHHHHcCCCC-cccccHHHH
Confidence 455788999999998763 34599999999999975 799999999999999999999999999654 346799999
Q ss_pred HHHHHHHHhhCCCCCCChhhHHHHHHHHhcCCHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHhhhccCCCCcccc
Q 012222 235 GDCVKHVLRELPSSPVPASCCTALLEAYKIDRKEARISAMRSAILETFPEPNRRLLQRILRMMHTISSHAHENRMTPSAV 314 (468)
Q Consensus 235 a~llK~fLr~LP~pLl~~~~~~~~~~~~~~~~~~~~i~~l~~li~~~LP~~n~~~L~~L~~~L~~V~~~s~~NkM~~~nL 314 (468)
|++||.|||+||+||||.++|+.|+.+.+.. .++++..++.+ +..||+.|+.+|+||+.||++|+++++.||||+.||
T Consensus 136 a~lLK~fLReLPePLl~~~ly~~~~~~~~~~-~~~~~~~~~~l-~~~LP~~n~~~L~~L~~~L~~V~~~s~~NkM~~~NL 213 (271)
T 3eap_A 136 AGLLKQFFRELPEPILPADLHEALLKAQQLG-TEEKNKATLLL-SCLLADHTVHVLRYFFNFLRNVSLRSSENKMDSSNL 213 (271)
T ss_dssp HHHHHHHHHHSSSCSSCGGGHHHHHHHTTSC-HHHHHHHHHHH-HTTSCHHHHHHHHHHHHHHHHHHHTHHHHCCCHHHH
T ss_pred HHHHHHHHHhCCcccCCHHHHHHHHHHHHHh-HHHHHHHHHHH-HHhCCHHHHHHHHHHHHHHHHHHHhcccCCCCHHHH
Confidence 9999999999999999999999999998764 46678888864 478999999999999999999999999999999999
Q ss_pred chhccccccCCCCCCCCccccccccCCCcHHHHHHHHHHhHHHHHHHHHHHhcccccCCCCC
Q 012222 315 AACMAPLLLRPLLAGECELEDDFDMNGDNSAQLLAAANAANNAQAIIATLLEEYENIFDDES 376 (468)
Q Consensus 315 A~vfaP~Ll~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~iv~~lI~~~~~iF~~~~ 376 (468)
|+||||+|+|++..... + . ............+|++||+||+.||....
T Consensus 214 Aivf~P~Ll~~~~~~~~-~-------~------~~~~~~~~~~~~vve~LI~~~~~IF~vp~ 261 (271)
T 3eap_A 214 AVIFAPNLLQTSEGHEK-M-------S------SNTEKKLRLQAAVVQTLIDYASDIGRVPD 261 (271)
T ss_dssp HHHHHHHHHTCCCCCTT-C-------C------HHHHHHHHHHHHHHHHHHHTGGGTTCCCH
T ss_pred HHHHHhHhccCCCCccc-h-------h------hhHHHHHHHHHHHHHHHHHhHHHHhCCCH
Confidence 99999999999842110 0 0 01122345567899999999999997654
No 14
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=100.00 E-value=2.1e-38 Score=330.09 Aligned_cols=193 Identities=18% Similarity=0.316 Sum_probs=171.3
Q ss_pred CCCccccchHHhhhc-CCCCCHHHHHHHHHHHHcCCCccCcEeecCCHHHHHHHHHHHhcCC-C-CCC--CCCChhHHHH
Q 012222 162 KSLVVGRPILLALED-IDGGPSFLEKALRFLEKFGTKVEGILRQAADVEEVDRRVQEYEQGK-T-EFS--ADEDAHVIGD 236 (468)
Q Consensus 162 ~~~vFG~~L~~~~~~-~~~vP~il~~~i~~L~~~gl~~eGIFR~~g~~~~v~~l~~~~~~g~-~-~~~--~~~d~~~va~ 236 (468)
..++||++|+.+++. ...||.+|.+|+++|+++|+.+|||||++|+.+++++|++.||++. . .+. ...|+|+||+
T Consensus 266 ~~~vFG~~L~~~~~~~~~~vP~iv~~~i~~le~~gl~~eGIfR~sG~~~~i~~L~~~~d~~~~~~~~~~~~~~dv~~va~ 345 (463)
T 3cxl_A 266 VKKVYSCDLTTLVKAHTTKRPMVVDMCIREIESRGLNSEGLYRVSGFSDLIEDVKMAFDRDGEKADISVNMYEDINIITG 345 (463)
T ss_dssp CCCCTTSCHHHHHHHHTCSSCHHHHHHHHHHHHHCSCSTTTTTSCCCHHHHHHHHHHHHHHGGGCCCSTTTCCCHHHHHH
T ss_pred cccccccccchhhhccCCCCCeeHHHHHHHHHhcCCCCCceeEecCCHHHHHHHHHHHHhcCCcCCcccccCCCcchhhh
Confidence 357999999999985 5679999999999999999999999999999999999999999853 2 222 2369999999
Q ss_pred HHHHHHhhCCCCCCChhhHHHHHHHHhcCCHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHhhhccCCCCccccch
Q 012222 237 CVKHVLRELPSSPVPASCCTALLEAYKIDRKEARISAMRSAILETFPEPNRRLLQRILRMMHTISSHAHENRMTPSAVAA 316 (468)
Q Consensus 237 llK~fLr~LP~pLl~~~~~~~~~~~~~~~~~~~~i~~l~~li~~~LP~~n~~~L~~L~~~L~~V~~~s~~NkM~~~nLA~ 316 (468)
+||.|||+||+||||.++|+.|+++....+.++++..++.+| .+||+.|+.+|++|+.||++|+++++.||||+.|||+
T Consensus 346 lLK~flReLPePLi~~~ly~~~~~~~~~~~~~~~~~~l~~ll-~~LP~~n~~~L~~L~~~L~~V~~~~~~NkM~~~NLAi 424 (463)
T 3cxl_A 346 ALKLYFRDLPIPLITYDAYPKFIESAKIMDPDEQLETLHEAL-KLLPPAHCETLRYLMAHLKRVTLHEKENLMNAENLGI 424 (463)
T ss_dssp HHHHHHHHCSSCSSCTTTHHHHHHHHHCCCHHHHHHHHHHHH-HHSCHHHHHHHHHHHHHHHHHHHTHHHHCCCHHHHHH
T ss_pred HHHHHHHhcCCCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHHHHhcccccCCCHHHHHH
Confidence 999999999999999999999999999999999999999966 6999999999999999999999999999999999999
Q ss_pred hccccccCCCCCCCCccccccccCCCcHHHHHHHHHHhHHHHHHHHHHHhcccccC
Q 012222 317 CMAPLLLRPLLAGECELEDDFDMNGDNSAQLLAAANAANNAQAIIATLLEEYENIF 372 (468)
Q Consensus 317 vfaP~Ll~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~iv~~lI~~~~~iF 372 (468)
||||+|++++..+.. +....+..++.+|++||+||+.||
T Consensus 425 vf~P~Ll~~~~~~~~-----------------~~~~~~~~~~~vve~LI~~~~~iF 463 (463)
T 3cxl_A 425 VFGPTLMRSPELDAM-----------------AALNDIRYQRLVVELLIKNEDILF 463 (463)
T ss_dssp HHHHHHCCCCCSCTT-----------------GGGGGHHHHHHHHHHHHHTHHHHC
T ss_pred HhhccccCCCCccHH-----------------HHHHHHHHHHHHHHHHHhchhhcC
Confidence 999999998853211 011234567789999999999998
No 15
>2xs6_A Phosphatidylinositol 3-kinase regulatory subunit; structural genomics consortium, SGC, transferase; 2.09A {Homo sapiens}
Probab=100.00 E-value=4.3e-40 Score=307.23 Aligned_cols=191 Identities=18% Similarity=0.160 Sum_probs=142.2
Q ss_pred CCCccccchHHhhhc---CCCCCHHHHHHHHHHHHcCCCccCcEeecCCHHHHHHHHHHHhcCCCCCCCCCChhHHHHHH
Q 012222 162 KSLVVGRPILLALED---IDGGPSFLEKALRFLEKFGTKVEGILRQAADVEEVDRRVQEYEQGKTEFSADEDAHVIGDCV 238 (468)
Q Consensus 162 ~~~vFG~~L~~~~~~---~~~vP~il~~~i~~L~~~gl~~eGIFR~~g~~~~v~~l~~~~~~g~~~~~~~~d~~~va~ll 238 (468)
..++||+||+.++++ .+.||.+|.+|+++|+++|+.+|||||++|+. +++ .+........|+|+||++|
T Consensus 19 ~~~vFGv~L~~l~~~~~~~~~vP~iv~~~i~~l~~~Gl~~eGIfR~sG~~-----lr~---~~~~~dl~~~dvh~va~lL 90 (214)
T 2xs6_A 19 YFQSMGLTLPDLPEQFSPPDVAPPLLVKLVEAIERTGLDSESHYRPELPA-----PRT---DWSLSDVDQWDTAALADGI 90 (214)
T ss_dssp ------CCCCCHHHHCCTTCCSCHHHHHHHHHHHHHCTTCSGGGCCSCCC-----CCC---CCCCTTGGGCCHHHHHHHH
T ss_pred CCcccCcCHHHHHHhhCCCCCCCHHHHHHHHHHHHhCCCCCCCeeeCHHH-----HHh---ccccCCCccCCHHHHHHHH
Confidence 356999999999983 35699999999999999999999999999998 333 2223334468999999999
Q ss_pred HHHHhhCCCCCCChhhHHHHHHHHhcCCHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHhhhccCCCCccccchhc
Q 012222 239 KHVLRELPSSPVPASCCTALLEAYKIDRKEARISAMRSAILETFPEPNRRLLQRILRMMHTISSHAHENRMTPSAVAACM 318 (468)
Q Consensus 239 K~fLr~LP~pLl~~~~~~~~~~~~~~~~~~~~i~~l~~li~~~LP~~n~~~L~~L~~~L~~V~~~s~~NkM~~~nLA~vf 318 (468)
|.|||+||+||||.++|+.|+++.+..+..+++. . ++.+||+.|+.+|+||+.||++|+++++.|||++.|||+||
T Consensus 91 K~flReLPePLi~~~ly~~~i~~~~~~~~~~~~~---~-l~~~LP~~n~~~L~~L~~~L~~V~~~s~~NkM~~~NLAivf 166 (214)
T 2xs6_A 91 KSFLLALPAPLVTPEASAEARRALREAAGPVGPA---L-EPPTLPLHRALTLRFLLQHLGRVARRAPALGPAVRALGATF 166 (214)
T ss_dssp HHHHHHSSSCSSCHHHHHHHHHHHHCC--CCGGG---G-STTTSCHHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHH
T ss_pred HHHHHhCCCCCCCHHHHHHHHHHHhcCCHHHHHH---H-HHHHCCHHHHHHHHHHHHHHHHHHHcccccCCCHHHHHHHH
Confidence 9999999999999999999999998766555444 3 45799999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCccccccccCCCcHHHHHHHHHHhHHHHHHHHHHHhcccccCCCC
Q 012222 319 APLLLRPLLAGECELEDDFDMNGDNSAQLLAAANAANNAQAIIATLLEEYENIFDDE 375 (468)
Q Consensus 319 aP~Ll~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~iv~~lI~~~~~iF~~~ 375 (468)
||+|+|++...+. . .+.....+....+.....+|++||+| .||+.+
T Consensus 167 ~P~Ll~~~~~~~~---~------~~~~~~~~~~~d~~~~~~vve~LI~n--~ife~d 212 (214)
T 2xs6_A 167 GPLLLRAPPPPSS---P------PPGGAPDGSEPSPDFPALLVEKLLQE--HLEEQE 212 (214)
T ss_dssp HHHHHC---------------------------CCTTHHHHHHHHHHHH--HHHC--
T ss_pred hhhhcCCcccccc---c------ccccchhhhHHhHHHHHHHHHHHHhh--hccccC
Confidence 9999999853200 0 00000011223356678999999976 577754
No 16
>3qis_A Inositol polyphosphate 5-phosphatase OCRL-1; DENT disease, RAC1, RAB gtpases, APPL1, endocytic PATH golgi complex, hydrolase-protein binding complex; 2.30A {Homo sapiens} PDB: 2qv2_A
Probab=100.00 E-value=9.9e-35 Score=292.76 Aligned_cols=141 Identities=16% Similarity=0.243 Sum_probs=130.3
Q ss_pred CCCHHHHHHHHHHHHcCCCccCcEeecCCHHHHHHHHHHHhcCCCCCCCCCChhHHHHHHHHHHhhCCCCCCChhhHHHH
Q 012222 179 GGPSFLEKALRFLEKFGTKVEGILRQAADVEEVDRRVQEYEQGKTEFSADEDAHVIGDCVKHVLRELPSSPVPASCCTAL 258 (468)
Q Consensus 179 ~vP~il~~~i~~L~~~gl~~eGIFR~~g~~~~v~~l~~~~~~g~~~~~~~~d~~~va~llK~fLr~LP~pLl~~~~~~~~ 258 (468)
.||.+|.+|++||+++|+.+|||||++|+..++++|++.+|+|...... .|+|++|++||.|||+||+||||.++|+.|
T Consensus 198 ~iP~~v~~~i~~l~~~Gl~~eGIFR~~G~~~~v~~L~~~~d~~~~~~~~-~dvh~va~lLK~fLReLPePLi~~~ly~~~ 276 (366)
T 3qis_A 198 QVPKEIWLLVDHLFKYACHQEDLFQTPGMQEELQQIIDCLDTSIPETIP-GSNHSVAEALLIFLEALPEPVICYELYQRC 276 (366)
T ss_dssp SSCHHHHHHHHHHHHHCTTCTTTTTSCCCHHHHHHHHHHHHHCCCSSCC-SCHHHHHHHHHHHHHHCSSCSSCHHHHHHH
T ss_pred CcChHHHHHHHHHHhcCCCCCCeEeCCCCHHHHHHHHHHHcCCCCCccc-cCHHHHHHHHHHHHHhCCCCCCcHHHHHHH
Confidence 5899999999999999999999999999999999999999999665443 499999999999999999999999999999
Q ss_pred HHHHhcCCHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHhhhccCCCCccccchhccccccCCCC
Q 012222 259 LEAYKIDRKEARISAMRSAILETFPEPNRRLLQRILRMMHTISSHAHENRMTPSAVAACMAPLLLRPLL 327 (468)
Q Consensus 259 ~~~~~~~~~~~~i~~l~~li~~~LP~~n~~~L~~L~~~L~~V~~~s~~NkM~~~nLA~vfaP~Ll~~~~ 327 (468)
+.+... ...++.++ .+||+.|+.+|.||+.||++|++|++.|||++.|||+||||+|||++.
T Consensus 277 ~~~~~~------~~~~~~ll-~~LP~~n~~~L~~L~~~L~~V~~~s~~NkM~~~NLA~vf~P~Llr~~~ 338 (366)
T 3qis_A 277 LDSAYD------PRICRQVI-SQLPRCHRNVFRYLMAFLRELLKFSEYNSVNANMIATLFTSLLLRPPP 338 (366)
T ss_dssp HHHTTC------HHHHHHHH-HTSCHHHHHHHHHHHHHHHHHHTTHHHHCCCHHHHHHHHHHHHSCCCC
T ss_pred HHHhhh------HHHHHHHH-HHCCHHHHHHHHHHHHHHHHHHHhccccCCCHHHHHHHHhhhcccCCC
Confidence 998764 23567655 699999999999999999999999999999999999999999999985
No 17
>1v88_A Oxysterol binding protein-related protein 8; vesicle transport, pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.81 E-value=1.7e-19 Score=154.90 Aligned_cols=102 Identities=25% Similarity=0.382 Sum_probs=77.4
Q ss_pred CCCceEEEeeeeeeecCCCcCCCeeEEEEEeCCeEEEEecCCCCCCCCCCccccccccEEecCCcceeec-CCCceeEEE
Q 012222 15 ASNTVFKSGPLFISSKGIGWKSWKKRWFILTRTSLVFFKNDPSALPQRGGEVNLTLGGIDLNNSGSVVVR-EDKKLLTVL 93 (468)
Q Consensus 15 ~~~~v~k~G~L~~~k~g~~~k~WkkRwfVL~~~~L~yyk~~~~~~~~~~~~~~~~l~~i~l~~~~~v~~~-~~k~~~f~i 93 (468)
.+..++++|||+ |+| ..+.|++|||||+++.|+|||++++.. +++.|.|..+..+... ..+++||.|
T Consensus 4 ~~~~v~k~GwL~--K~g-~~k~WkrRWfVLk~~~L~yyk~~~~~~---------p~G~I~L~~~~v~~~~~~~~~~~F~i 71 (130)
T 1v88_A 4 GSSGIVMADWLK--IRG-TLKSWTKLWCVLKPGVLLIYKTQKNGQ---------WVGTVLLNACEIIERPSKKDGFCFKL 71 (130)
T ss_dssp SSSSCCEEEEEE--ECC-SSSSCEEEEEEEETTEEEEESCSSSCC---------CCEEEECSSCEECCCCTTTSSCEEEE
T ss_pred CCCceEEEeEEE--EeC-CCCCceEEEEEEECCEEEEECCCCCCC---------ceEEEEcCCCEEEECCCCCCCeEEEE
Confidence 356789999886 566 689999999999999999999998765 4556777665433222 234488988
Q ss_pred EecCCC---------------------CcEEEEEeCCHHHHHHHHHHHHHHHHhCC
Q 012222 94 FPDGRD---------------------GRAFTLKAETSEDLYEWKTALELALAQAP 128 (468)
Q Consensus 94 ~~~~~~---------------------~r~y~l~A~s~~e~~~Wi~aI~~ai~~~p 128 (468)
...... .++|+|+|+|++|+++||+||+.|+...|
T Consensus 72 ~~~~~~~i~~~~g~~~~~~g~~~~~~~~~~~~f~A~s~~e~~~Wi~ai~~a~~~~~ 127 (130)
T 1v88_A 72 FHPLEQSIWAVKGPKGEAVGSITQPLPSSYLIIRATSESDGRCWMDALELALKSGP 127 (130)
T ss_dssp ECTTCCCCSCSSCTTSCSCSCCCSCCCSSCCEEECSSHHHHHHHHHHHHHHHTTTT
T ss_pred EcCCccccccccCCcccccccccccCCceEEEEECCCHHHHHHHHHHHHHHHhcCC
Confidence 642211 24599999999999999999999997654
No 18
>1wi1_A Calcium-dependent activator protein for secretion, CAPS; PH domain, PIP2 binding site, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.80 E-value=1.3e-19 Score=152.25 Aligned_cols=99 Identities=25% Similarity=0.386 Sum_probs=73.3
Q ss_pred CCceEEEeeeeeeecCC-CcCCCeeEEEEEeCCeEEEEe----cCCCCCCCCCCccccccccEEecCCc-----ceeecC
Q 012222 16 SNTVFKSGPLFISSKGI-GWKSWKKRWFILTRTSLVFFK----NDPSALPQRGGEVNLTLGGIDLNNSG-----SVVVRE 85 (468)
Q Consensus 16 ~~~v~k~G~L~~~k~g~-~~k~WkkRwfVL~~~~L~yyk----~~~~~~~~~~~~~~~~l~~i~l~~~~-----~v~~~~ 85 (468)
+.+..++|||+ |+|+ .+|+||||||||+++.|+||+ ++.+..| ++.|.|..++ ......
T Consensus 5 p~n~~~~G~L~--KqG~~~~K~WKrRwFVL~~~~LyYfk~~~~~~~~~~p---------~G~I~L~g~tV~~~~~~~~~~ 73 (126)
T 1wi1_A 5 SSGMKHSGYLW--AIGKNVWKRWKKRFFVLVQVSQYTFAMCSYREKKAEP---------QELLQLDGYTVDYTDPQPGLE 73 (126)
T ss_dssp CCCEEEEEEEE--EECSSSCCSCEEEEEEEEEEETTEEEEEECCSSSSCC---------SEEEECSSCEEEECCCCSSCC
T ss_pred CCCCceeEEEE--EeCCCcccccceEEEEEeCCEEEEEEcccccccCCCC---------ceEEECCCcEEEEecCCcccc
Confidence 34689999887 4444 468999999999999999999 7776663 3445544432 111113
Q ss_pred CCceeEEEEecCCCCcEEEEEeCCHHHHHHHHHHHHHHHHhCC
Q 012222 86 DKKLLTVLFPDGRDGRAFTLKAETSEDLYEWKTALELALAQAP 128 (468)
Q Consensus 86 ~k~~~f~i~~~~~~~r~y~l~A~s~~e~~~Wi~aI~~ai~~~p 128 (468)
.++++|.+.. .+++|+|+|+|++||..||+||.+|+.++.
T Consensus 74 ~~k~~F~~v~---~~~ty~~~Adseee~~~WikAi~~A~~~~~ 113 (126)
T 1wi1_A 74 GGRAFFNAVK---EGDTVIFASDDEQDRILWVQAMYRATGQSH 113 (126)
T ss_dssp SCSSEEEEEC---SSCEEEEECSSHHHHHHHHHHHHHHHTCSS
T ss_pred cCceEEEEec---CCceEEEEcCCHHHHHHHHHHHHHHhcccc
Confidence 4667887654 356799999999999999999999997653
No 19
>1x1f_A Signal-transducing adaptor protein 1; docking protein BRDG1, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.79 E-value=1.1e-18 Score=153.13 Aligned_cols=95 Identities=20% Similarity=0.327 Sum_probs=74.5
Q ss_pred ceEEEeeeeeeecCCCcCCCeeEEEEEeCCeEEEEecCCCCCCCCCCccccccccEEecCCcceee---cCCCceeEEEE
Q 012222 18 TVFKSGPLFISSKGIGWKSWKKRWFILTRTSLVFFKNDPSALPQRGGEVNLTLGGIDLNNSGSVVV---REDKKLLTVLF 94 (468)
Q Consensus 18 ~v~k~G~L~~~k~g~~~k~WkkRwfVL~~~~L~yyk~~~~~~~~~~~~~~~~l~~i~l~~~~~v~~---~~~k~~~f~i~ 94 (468)
.++|+|||+ |+|+..+.|++|||||+++.|+|||++.+..+ .+.|.|..+..+.. ...+.++|.|.
T Consensus 17 pv~keG~L~--Kkg~~~k~WkrRWFvLk~~~L~Yyk~~~d~~~---------~g~I~L~~~~~~~~~~~~~~~~~~F~I~ 85 (149)
T 1x1f_A 17 PLYFEGFLL--IKRSGYREYEHYWTELRGTTLFFYTDKKSIIY---------VDKLDIVDLTCLTEQNSTEKNCAKFTLV 85 (149)
T ss_dssp CEEEEEEEE--EECTTCCSCEEEEEEEETTEEEEESCSSCSSC---------SEECCCSSCCEEEECCCTTSCCCEEEEE
T ss_pred CccEEEEEE--EeCCCCCCceeEEEEEcCCEEEEEeCCCcccc---------CcEEECCCceEEeeccCCCCcCcEEEEE
Confidence 499999775 66777899999999999999999999988763 34566666543321 12335677775
Q ss_pred ecCCCCcEEEEEeCCHHHHHHHHHHHHHHHHh
Q 012222 95 PDGRDGRAFTLKAETSEDLYEWKTALELALAQ 126 (468)
Q Consensus 95 ~~~~~~r~y~l~A~s~~e~~~Wi~aI~~ai~~ 126 (468)
. ..++|+|+|+|.+|+++||.||+.++..
T Consensus 86 t---~~r~~~f~A~s~ee~~eWi~aI~~v~~~ 114 (149)
T 1x1f_A 86 L---PKEEVQLKTENTESGEEWRGFILTVTEL 114 (149)
T ss_dssp C---SSCCEEEECSSHHHHHHHHHHHHHHHHS
T ss_pred c---CCCEEEEEcCCHHHHHHHHHHHHHHHcc
Confidence 4 3689999999999999999999999874
No 20
>1dyn_A Dynamin; signal transduction protein; 2.20A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dyn_A 3zys_C 2ys1_A
Probab=99.77 E-value=1.9e-18 Score=143.54 Aligned_cols=100 Identities=29% Similarity=0.426 Sum_probs=75.0
Q ss_pred ceEEEeeeeeeecCCCcCCCeeEEEEEeCCeEEEEecCCCCCCCCCCccccccccEEecCCcceeecCCCceeEEEEecC
Q 012222 18 TVFKSGPLFISSKGIGWKSWKKRWFILTRTSLVFFKNDPSALPQRGGEVNLTLGGIDLNNSGSVVVREDKKLLTVLFPDG 97 (468)
Q Consensus 18 ~v~k~G~L~~~k~g~~~k~WkkRwfVL~~~~L~yyk~~~~~~~~~~~~~~~~l~~i~l~~~~~v~~~~~k~~~f~i~~~~ 97 (468)
.|+++|||+++..|..+..||+|||||++++|+|||++.+..|. ..++|.++.+..+.+- ...++++|.+.+..
T Consensus 11 ~VirkGWL~k~~~g~~k~~wk~rWFVLt~~~L~yyKd~~eke~~----G~IpL~~~~vr~v~~~--~~~rk~~F~l~~~d 84 (125)
T 1dyn_A 11 LVIRKGWLTINNIGIMKGGSKEYWFVLTAENLSWYKDDEEKEKK----YMLSVDNLKLRDVEKG--FMSSKHIFALFNTE 84 (125)
T ss_dssp CEEEEEEEEESCCCGGGTSSEEEEEEEESSEEEEESSTTCSCEE----EEEECTTEEEEECCSC--SSSSCEEEEEEETT
T ss_pred ceEEEEEEEEecCccccCCceeeEEEEeccceeeecCCcccccc----eEEECCCceEeccCCC--CCCCceEEEEECCC
Confidence 49999988754444433359999999999999999999887643 2356667776654321 12577899887632
Q ss_pred -C----CCcEEEEEeCCHHHHHHHHHHHHHH
Q 012222 98 -R----DGRAFTLKAETSEDLYEWKTALELA 123 (468)
Q Consensus 98 -~----~~r~y~l~A~s~~e~~~Wi~aI~~a 123 (468)
. +.++|.|.|+|.+|+++|+++|.+|
T Consensus 85 ~r~v~~~h~~y~LsA~t~ee~~~Wi~s~~ra 115 (125)
T 1dyn_A 85 QRNVYKDYRQLELACETQEEVDSWKASFLRA 115 (125)
T ss_dssp SSCSSTTCSSEEEEESSHHHHHHHHHHHHHT
T ss_pred CccccccceEEEEeCCCHHHHHHHHHHHHhC
Confidence 1 4569999999999999999999665
No 21
>2da0_A 130-kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; PH domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.77 E-value=3.3e-18 Score=143.60 Aligned_cols=104 Identities=19% Similarity=0.246 Sum_probs=78.0
Q ss_pred CCCCCCCceEEEeeeeeeecCCC-cCCCeeEEEEEeCCeEEEEecCCCCCCCCCCccccccccEEecCCcceeecCCCce
Q 012222 11 PRPGASNTVFKSGPLFISSKGIG-WKSWKKRWFILTRTSLVFFKNDPSALPQRGGEVNLTLGGIDLNNSGSVVVREDKKL 89 (468)
Q Consensus 11 ~~~~~~~~v~k~G~L~~~k~g~~-~k~WkkRwfVL~~~~L~yyk~~~~~~~~~~~~~~~~l~~i~l~~~~~v~~~~~k~~ 89 (468)
|++.....++++|||++ +|.. .+.|++|||||+++.|+||+++.+.. .+.+.+..+. +.+..++++
T Consensus 2 ~~~~~~~~~~~~G~L~K--~~~~~~k~WkkR~fvL~~~~L~yyk~~~~~~----------~~~i~l~~~~-v~~~~~~~~ 68 (114)
T 2da0_A 2 SSGSSGYGSEKKGYLLK--KSDGIRKVWQRRKCSVKNGILTISHATSNRQ----------PAKLNLLTCQ-VKPNAEDKK 68 (114)
T ss_dssp CCSCCCCCSCEEEEEEE--ECSSSCCCEEEEEEEEETTEEEECCSSCCSC----------CEEEETTTSE-EEECSSSSS
T ss_pred CCCCCCCCccEEEEEEE--eCCCCCCCceeEEEEEeCCEEEEEcCCCCCC----------CCEEEeeeeE-EEECCCCCC
Confidence 34445567899998874 4443 48999999999999999999965532 2344444432 334456678
Q ss_pred eEEEEecCCCCcEEEEEeCCHHHHHHHHHHHHHHHHhCCcc
Q 012222 90 LTVLFPDGRDGRAFTLKAETSEDLYEWKTALELALAQAPSA 130 (468)
Q Consensus 90 ~f~i~~~~~~~r~y~l~A~s~~e~~~Wi~aI~~ai~~~p~~ 130 (468)
+|.|.. .+|+|+|+|+|++|+.+||.+|+.++..+-+.
T Consensus 69 ~F~I~~---~~r~~~l~a~s~~e~~~Wi~al~~~~~~~~~~ 106 (114)
T 2da0_A 69 SFDLIS---HNRTYHFQAEDEQDYVAWISVLTNSKEEALTM 106 (114)
T ss_dssp CEEEEE---TTEEEEEECSSHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEEEc---CCcEEEEEcCCHHHHHHHHHHHHHHHHHHHHh
Confidence 898874 47999999999999999999999999876443
No 22
>1wgq_A FYVE, rhogef and PH domain containing 6; ethanol decreased 4; pleckstrin homoloy domain, signal transduction, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=99.76 E-value=2.6e-18 Score=142.86 Aligned_cols=100 Identities=19% Similarity=0.321 Sum_probs=76.6
Q ss_pred CCceEEEeeeeeeecCCCcCCCeeEEEEEeCCeEEEEecCCCCCCCCCCccccccccEEecCCcceeec--CCCceeEEE
Q 012222 16 SNTVFKSGPLFISSKGIGWKSWKKRWFILTRTSLVFFKNDPSALPQRGGEVNLTLGGIDLNNSGSVVVR--EDKKLLTVL 93 (468)
Q Consensus 16 ~~~v~k~G~L~~~k~g~~~k~WkkRwfVL~~~~L~yyk~~~~~~~~~~~~~~~~l~~i~l~~~~~v~~~--~~k~~~f~i 93 (468)
+..++++|||+ |+|...+.|++|||||+++.|+||+++.+..| .+.|.|..+..+... ..++++|.|
T Consensus 5 ~~~~~~~G~L~--K~~~~~~~Wk~RwfvL~~~~L~yyk~~~~~~~---------~~~i~L~~~~~~~~~~~~~~~~~F~i 73 (109)
T 1wgq_A 5 SSGSTMSGYLY--RSKGSKKPWKHLWFVIKNKVLYTYAASEDVAA---------LESQPLLGFTVTLVKDENSESKVFQL 73 (109)
T ss_dssp CCSCSCEEEEE--EESSTTSCCEEEEEEEETTEEEEESCTTCSSC---------SEEEECSSEEEEECCCSSCSSSEEEE
T ss_pred CCCCeEEEEEE--eCCCCCCCceeEEEEEeCCEEEEECCCCcCcc---------CceEECCCCEEEECCCCCCCCcEEEE
Confidence 34678999887 55666799999999999999999999877653 445666655443322 234578887
Q ss_pred EecCCCCcEEEEEeCCHHHHHHHHHHHHHHHHhCC
Q 012222 94 FPDGRDGRAFTLKAETSEDLYEWKTALELALAQAP 128 (468)
Q Consensus 94 ~~~~~~~r~y~l~A~s~~e~~~Wi~aI~~ai~~~p 128 (468)
.. ++.++|+|+|+|++|+.+|+.+|+.|+...|
T Consensus 74 ~~--~~~~~~~~~a~s~~e~~~Wi~al~~a~~~~~ 106 (109)
T 1wgq_A 74 LH--KGMVFYVFKADDAHSTQRWIDAFQEGTVSGP 106 (109)
T ss_dssp EE--TTEEEEEEECSSHHHHHHHHHHHHHHHSCCC
T ss_pred Ee--CCCeEEEEECCCHHHHHHHHHHHHHHhccCC
Confidence 64 4468899999999999999999999986543
No 23
>1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.76 E-value=6.1e-18 Score=141.46 Aligned_cols=100 Identities=18% Similarity=0.304 Sum_probs=78.7
Q ss_pred CceEEEeeeeeeecCCCcCCCeeEEEEEeCCeEEEEecCCCCCCCCCCccccccccEEecCCccee---ecCCCceeEEE
Q 012222 17 NTVFKSGPLFISSKGIGWKSWKKRWFILTRTSLVFFKNDPSALPQRGGEVNLTLGGIDLNNSGSVV---VREDKKLLTVL 93 (468)
Q Consensus 17 ~~v~k~G~L~~~k~g~~~k~WkkRwfVL~~~~L~yyk~~~~~~~~~~~~~~~~l~~i~l~~~~~v~---~~~~k~~~f~i 93 (468)
..++++|||+ |+|+..++|++|||||+++.|+||+++.+.. +.+.|.|..+..+. ....++++|.|
T Consensus 3 ~~~~~~G~L~--K~g~~~~~Wk~R~fvL~~~~L~yy~~~~~~~---------~~g~i~L~~~~~~~~~~~~~~~~~~F~i 71 (113)
T 1pls_A 3 PKRIREGYLV--KKGSVFNTWKPMWVVLLEDGIEFYKKKSDNS---------PKGMIPLKGSTLTSPCQDFGKRMFVFKI 71 (113)
T ss_dssp CCCSEEEEEE--EESSSSSCCEEEEEEEETTEEEEESSTTCSS---------CSEEEESSSCCEESSCCSSCCSSSEEEE
T ss_pred CCCcEEEEEE--EeCCCCCCceEEEEEEECCEEEEEeCCCCCC---------cceEEEcCCCEEEEecCCCCCCccEEEE
Confidence 3678999776 6676789999999999999999999987655 34567777665432 22345578887
Q ss_pred EecCCCCcEEEEEeCCHHHHHHHHHHHHHHHHhCCc
Q 012222 94 FPDGRDGRAFTLKAETSEDLYEWKTALELALAQAPS 129 (468)
Q Consensus 94 ~~~~~~~r~y~l~A~s~~e~~~Wi~aI~~ai~~~p~ 129 (468)
.. .++++|+|+|+|++|+.+|+.+|+.++...+.
T Consensus 72 ~~--~~~r~~~l~a~s~~e~~~Wi~ai~~~~~~~~~ 105 (113)
T 1pls_A 72 TT--TKQQDHFFQAAFLEERDAWVRDINKAIKCIEG 105 (113)
T ss_dssp EE--TTTEEEEEECSSHHHHHHHHHHHHHHHHHHTT
T ss_pred Ec--CCCCEEEEECCCHHHHHHHHHHHHHHHhccch
Confidence 64 44689999999999999999999999986543
No 24
>2dhk_A TBC1 domain family member 2; PH domain, paris-1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.76 E-value=3.9e-18 Score=144.26 Aligned_cols=99 Identities=22% Similarity=0.291 Sum_probs=77.5
Q ss_pred CCceEEEeeeeeeecCCCcCCCeeEEEEEeCC--eEEEEecCCCCCCCCCCccccccccEEecCCcceeecCCCceeEEE
Q 012222 16 SNTVFKSGPLFISSKGIGWKSWKKRWFILTRT--SLVFFKNDPSALPQRGGEVNLTLGGIDLNNSGSVVVREDKKLLTVL 93 (468)
Q Consensus 16 ~~~v~k~G~L~~~k~g~~~k~WkkRwfVL~~~--~L~yyk~~~~~~~~~~~~~~~~l~~i~l~~~~~v~~~~~k~~~f~i 93 (468)
+..+.++|||+++..++..+.|++|||||+++ .|+||+++.+.. +.+.|.|..+..+.....+.++|.|
T Consensus 5 ~~~~~~~G~L~K~g~~~~~k~WkkRwfvL~~~~~~L~Yy~~~~~~~---------~~g~I~L~~~~~~~~~~~~~~~F~i 75 (119)
T 2dhk_A 5 SSGKKLCGYLSKFGGKGPIRGWKSRWFFYDERKCQLYYSRTAQDAN---------PLDSIDLSSAVFDCKADAEEGIFEI 75 (119)
T ss_dssp CSCCCCEEEEEECSCSSSSCCCEEEEEEEETTTTEEEEESSTTCCS---------CSEEEEGGGCEEEECTTGGGCEEEE
T ss_pred CCCCcEEEEEEecCCCCCCCCceeEEEEEECCccEEEEECCCCCcc---------cccEEECCCCEEEecCCCCCCEEEE
Confidence 35678999886433223679999999999998 999999988765 4567777776655443445678877
Q ss_pred EecCCCCcEEEEEeCCHHHHHHHHHHHHHHHHh
Q 012222 94 FPDGRDGRAFTLKAETSEDLYEWKTALELALAQ 126 (468)
Q Consensus 94 ~~~~~~~r~y~l~A~s~~e~~~Wi~aI~~ai~~ 126 (468)
.. .+|+|+|+|+|++|+++||.+|+.++..
T Consensus 76 ~~---~~r~~~l~a~s~~e~~~Wi~al~~~~~~ 105 (119)
T 2dhk_A 76 KT---PSRVITLKAATKQAMLYWLQQLQMKRWE 105 (119)
T ss_dssp EC---SSCCEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred Ee---CCcEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 64 3799999999999999999999999864
No 25
>2rsg_A Collagen type IV alpha-3-binding protein; pleckstrin homology, lipid transport; NMR {Homo sapiens}
Probab=99.76 E-value=1.6e-18 Score=140.21 Aligned_cols=92 Identities=18% Similarity=0.303 Sum_probs=71.4
Q ss_pred eEEEeeeeeeecCCCcCCCeeEEEEEeCCeEEEEecCCCCCCCCCCccccccccEEecCCcceeecCCCceeEEEEecCC
Q 012222 19 VFKSGPLFISSKGIGWKSWKKRWFILTRTSLVFFKNDPSALPQRGGEVNLTLGGIDLNNSGSVVVREDKKLLTVLFPDGR 98 (468)
Q Consensus 19 v~k~G~L~~~k~g~~~k~WkkRwfVL~~~~L~yyk~~~~~~~~~~~~~~~~l~~i~l~~~~~v~~~~~k~~~f~i~~~~~ 98 (468)
|.|+|||+ |+|...++|++|||||+++.|.||+++.+.... +.+.+.+..+.. ......+++|.+..
T Consensus 1 V~k~G~L~--K~g~~~k~WkkR~FvL~~~~L~Yy~~~~~~~~~-------~~~~i~l~~~~~-~~~~~~~~~F~i~~--- 67 (94)
T 2rsg_A 1 VERCGVLS--KWTNYIHGWQDRWVVLKNNALSYYKSEDETEYG-------CRGSICLSKAVI-TPHDFDECRFDISV--- 67 (94)
T ss_dssp CCEEEEEE--EESSSTTCEEEEEEEEETTEEEEESSTTGGGTC-------CSEEEETTTCEE-EECSSCSSEEEEEE---
T ss_pred CCEEEEEE--EeCCCCCCceEEEEEEECCEEEEEEeccccccc-------ceeeEecceeee-ecCcccceeEEEEe---
Confidence 57999776 677788999999999999999999987654321 344566665432 23345567787765
Q ss_pred CCcEEEEEeCCHHHHHHHHHHHHHH
Q 012222 99 DGRAFTLKAETSEDLYEWKTALELA 123 (468)
Q Consensus 99 ~~r~y~l~A~s~~e~~~Wi~aI~~a 123 (468)
.+|+|+|+|+|++|+++||.||++|
T Consensus 68 ~~r~~~l~A~s~~e~~~Wi~aLq~A 92 (94)
T 2rsg_A 68 NDSVWYLRAQDPDHRQQWIDAIEQH 92 (94)
T ss_dssp TTEEEEEECCSSCCTHHHHHHHHHH
T ss_pred CCeEEEEECCCHHHHHHHHHHHHhh
Confidence 4799999999999999999999976
No 26
>2p0d_A RHO GTPase-activating protein 9; protein-phosphoinositide complex, pleckstrin homology domain, ligand binding protein; HET: I3P; 1.81A {Homo sapiens} PDB: 2p0f_A 2p0h_A*
Probab=99.75 E-value=4.3e-18 Score=146.21 Aligned_cols=110 Identities=26% Similarity=0.459 Sum_probs=74.7
Q ss_pred CCceEEEeeeeeee---cCC-CcCCCeeEEEEEeCCeEEEEecCCCCCCCC--CCccccccccEEecCCcceeec--CCC
Q 012222 16 SNTVFKSGPLFISS---KGI-GWKSWKKRWFILTRTSLVFFKNDPSALPQR--GGEVNLTLGGIDLNNSGSVVVR--EDK 87 (468)
Q Consensus 16 ~~~v~k~G~L~~~k---~g~-~~k~WkkRwfVL~~~~L~yyk~~~~~~~~~--~~~~~~~l~~i~l~~~~~v~~~--~~k 87 (468)
+..+.|+|||++++ +|. .+++|++|||||+++.|+|||+++...+.. +.....+.+.|+|..+...... ..+
T Consensus 9 ~~~~~k~G~L~kk~~~~~G~~~~k~Wk~rwfvL~~~~L~yykd~~~~~~~~~~~~~~~~p~g~I~L~~~~v~~~~~~~kr 88 (129)
T 2p0d_A 9 SHEVEKSGLLNMTKIAQGGRKLRKNWGPSWVVLTGNSLVFYREPPPTAPSSGWGPAGSRPESSVDLRGAALAHGRHLSSR 88 (129)
T ss_dssp CCSEEEEEEEEEEEEEETTEECCCCCEEEEEEEESSEEEEESCC--------------CCSEEEECTTCEEEECTTSCSS
T ss_pred CcceeEEEEEEEeeeccCCCcCCCCceEEEEEEeCCEEEEEcCcccccccccccccCCCCccEEEeCCcEEEECCCCCCC
Confidence 35789999998642 232 248999999999999999999985332100 0001124556777665432221 244
Q ss_pred ceeEEEEecCCCCcEEEEEeCCHHHHHHHHHHHHHHHHhC
Q 012222 88 KLLTVLFPDGRDGRAFTLKAETSEDLYEWKTALELALAQA 127 (468)
Q Consensus 88 ~~~f~i~~~~~~~r~y~l~A~s~~e~~~Wi~aI~~ai~~~ 127 (468)
+++|.|. ++++++|+|+|+|++|+++||.+|+.+|.+.
T Consensus 89 ~~~F~l~--t~~~~~yl~qA~s~~e~~~Wi~aI~~~i~~~ 126 (129)
T 2p0d_A 89 RNVLHIR--TIPGHEFLLQSDHETELRAWHRALRTVIERL 126 (129)
T ss_dssp SSEEEEE--CTTSCEEEEECSCHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEE--cCCCCEEEEECCCHHHHHHHHHHHHHHHHhc
Confidence 5677775 3567899999999999999999999999864
No 27
>1v89_A Hypothetical protein KIAA0053; pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.75 E-value=1.2e-17 Score=140.44 Aligned_cols=103 Identities=23% Similarity=0.411 Sum_probs=78.0
Q ss_pred CCceEEEeeeeeeecCCCcCCCeeEEEEEeCCeEEEEecCCCCCCCCCCccccccccEEecCCcceee----cCCCceeE
Q 012222 16 SNTVFKSGPLFISSKGIGWKSWKKRWFILTRTSLVFFKNDPSALPQRGGEVNLTLGGIDLNNSGSVVV----REDKKLLT 91 (468)
Q Consensus 16 ~~~v~k~G~L~~~k~g~~~k~WkkRwfVL~~~~L~yyk~~~~~~~~~~~~~~~~l~~i~l~~~~~v~~----~~~k~~~f 91 (468)
...++++|||+ |+|...+.|++|||||+++.|+||+++.+..| .+.|.|..+..+.. ...++++|
T Consensus 5 ~~~~~~~G~L~--K~g~~~~~Wk~R~fvL~~~~L~yy~~~~~~~~---------~g~i~L~~~~v~~~~~~~~~~~~~~f 73 (118)
T 1v89_A 5 SSGPIKMGWLK--KQRSIVKNWQQRYFVLRAQQLYYYKDEEDTKP---------QGCMYLPGCTIKEIATNPEEAGKFVF 73 (118)
T ss_dssp SSCEEEEEEEE--EECSSSSCEEEEEEEEETTEEEEESSSSCCSC---------SEEECSTTEEEEEECCCSSCCCCCEE
T ss_pred CCCCcEEEEEE--ecCCCCCCccEEEEEEECCEEEEEeCCCCCCc---------eEEEECCCCEEEEcCcCcccCCcceE
Confidence 34789999776 55667889999999999999999999877553 34455554432221 23456788
Q ss_pred EEEecC-----CCCcEEEEEeCCHHHHHHHHHHHHHHHHhCCc
Q 012222 92 VLFPDG-----RDGRAFTLKAETSEDLYEWKTALELALAQAPS 129 (468)
Q Consensus 92 ~i~~~~-----~~~r~y~l~A~s~~e~~~Wi~aI~~ai~~~p~ 129 (468)
.|.... ...++|+|+|+|++|+.+|+.+|+.++..+|+
T Consensus 74 ~i~~~~~~~~~~~~~~~~l~a~s~~e~~~Wi~al~~~~~~~~~ 116 (118)
T 1v89_A 74 EIIPASWDQNRMGQDSYVLMASSQAEMEEWVKFLRRVAGSGPS 116 (118)
T ss_dssp EEEESCCSSCCSSCCCEEEECSSHHHHHHHHHHHHHHHHCCSC
T ss_pred EEECCccccccCCCcEEEEECCCHHHHHHHHHHHHHHHccCCC
Confidence 876522 25789999999999999999999999986654
No 28
>2w2x_D 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-2; hydrolase, phospholipase C, phosphoinositides, RHO gtpases, RAC, SH2 domain; HET: GSP; 2.30A {Homo sapiens} PDB: 2w2w_A* 2w2x_C* 2k2j_A
Probab=99.75 E-value=7.3e-19 Score=149.96 Aligned_cols=105 Identities=18% Similarity=0.309 Sum_probs=73.2
Q ss_pred CceEEEeeeeeeecCCCcCCCeeEEEEEeCCeEEEEecCCC----CCCCCCCccccccccEEecCCcceeec---CCCce
Q 012222 17 NTVFKSGPLFISSKGIGWKSWKKRWFILTRTSLVFFKNDPS----ALPQRGGEVNLTLGGIDLNNSGSVVVR---EDKKL 89 (468)
Q Consensus 17 ~~v~k~G~L~~~k~g~~~k~WkkRwfVL~~~~L~yyk~~~~----~~~~~~~~~~~~l~~i~l~~~~~v~~~---~~k~~ 89 (468)
..+.|+|||+ |+|...++|++|||||+++.|+||+++.. ..|.+ ..+.+.|+|..+...... ..+++
T Consensus 10 ~~~~k~G~L~--K~g~~~k~Wk~RwfVL~~~~L~yyk~~~~~~~e~~plg----~~~~G~I~L~~~~v~~~~~~~~~k~~ 83 (124)
T 2w2x_D 10 DEHKQQGELY--MWDSIDQKWTRHFCAIADAKLSFSDDIEQTMEEDNPLG----SLCRGILDLNTYNVVKAPQGKNQKSF 83 (124)
T ss_dssp ---CCEEEEE--EEETTTTEEEEEEEEEETTEEEEEEEHHHHHHCSSCCC----CSCSEEEEGGGEEEEECTTCBTTBSE
T ss_pred hhcceeEEEE--EECCCCCCceEeEEEEECCEEEEEcccccccccccccC----CccccEEECCCCEEEEccCCcCCCCE
Confidence 4689999887 45566889999999999999999998532 12211 123456666665433222 34668
Q ss_pred eEEEEecCCCCcEEEEEeCCHHHHHHHHHHHHHHHHhC
Q 012222 90 LTVLFPDGRDGRAFTLKAETSEDLYEWKTALELALAQA 127 (468)
Q Consensus 90 ~f~i~~~~~~~r~y~l~A~s~~e~~~Wi~aI~~ai~~~ 127 (468)
+|.|.......++|+|+|+|.+|+.+||.||+.++..+
T Consensus 84 ~F~I~~~~~~~~~~~~~A~s~ee~~~Wi~ai~~a~~~~ 121 (124)
T 2w2x_D 84 VFILEPKQQGDPPVEFATDKVEELFEWFQSIREITWKI 121 (124)
T ss_dssp EEEEEECC--CCCEEEEECCCHHHHHHHHHHHHHHC--
T ss_pred EEEEECCCCCCceEEEEECCHHHHHHHHHHHHHHHHhh
Confidence 88887644445789999999999999999999998754
No 29
>2d9v_A Pleckstrin homology domain-containing protein family B member 1; PH domain, phret1, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.75 E-value=5.6e-18 Score=145.67 Aligned_cols=109 Identities=23% Similarity=0.401 Sum_probs=74.9
Q ss_pred CCCceEEEeeeeeeecCCCcCCCeeEEEEE-eCCeEEEEecCCCCCCCCCCccccccccEEec-CCcceee--cCCCcee
Q 012222 15 ASNTVFKSGPLFISSKGIGWKSWKKRWFIL-TRTSLVFFKNDPSALPQRGGEVNLTLGGIDLN-NSGSVVV--REDKKLL 90 (468)
Q Consensus 15 ~~~~v~k~G~L~~~k~g~~~k~WkkRwfVL-~~~~L~yyk~~~~~~~~~~~~~~~~l~~i~l~-~~~~v~~--~~~k~~~ 90 (468)
....++++|||+ |+|...+.||+||||| +++.|+||+++.+..+.+...+.+.+..+.+. .|..+.. ...++++
T Consensus 4 ~~~~v~~~G~L~--K~g~~~k~WkkRwFVL~~~~~L~Yyk~~~~~~~~g~i~l~~~~~~i~~~~~~~~v~~~~~~~~~~~ 81 (130)
T 2d9v_A 4 GSSGLVRGGWLW--RQSSILRRWKRNWFALWLDGTLGYYHDETAQDEEDRVVIHFNVRDIKVGQECQDVQPPEGRSRDGL 81 (130)
T ss_dssp SCCCEEEEEEEE--EECSSSCCEEEEEEEEETTTEEEEESSSSTTSEEEEEECTTTEEEEEEGGGCSSCCCCSSCCTTTE
T ss_pred CCCceeEEEEEE--eecCccCCceeeEEEEccCCEEEEEeCCCCCCcCceEecccceeEEeccccccccCCCCCCCcCcE
Confidence 345789999876 5566789999999999 89999999998765533211111111112211 1112221 2345678
Q ss_pred EEEEecCCCCcEEEEEeCCHHHHHHHHHHHHHHHHhC
Q 012222 91 TVLFPDGRDGRAFTLKAETSEDLYEWKTALELALAQA 127 (468)
Q Consensus 91 f~i~~~~~~~r~y~l~A~s~~e~~~Wi~aI~~ai~~~ 127 (468)
|.|.. .++|+|+|+|+|++|+++||.||+.++...
T Consensus 82 F~I~~--~~~r~~~l~A~s~~e~~~Wi~al~~a~~~~ 116 (130)
T 2d9v_A 82 LTVNL--REGSRLHLCAETRDDAIAWKTALMEANSTP 116 (130)
T ss_dssp EEEEE--TTSCEEEEECSSHHHHHHHHHHHHHHHTCC
T ss_pred EEEEe--CCCCEEEEEcCCHHHHHHHHHHHHHHHcCC
Confidence 88764 356899999999999999999999998753
No 30
>1v5u_A SBF1, SET binding factor 1; MTMR5, the pleckstrin homology domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.55.1.1
Probab=99.75 E-value=4.7e-18 Score=142.86 Aligned_cols=100 Identities=26% Similarity=0.437 Sum_probs=76.2
Q ss_pred CCceEEEeeeeeeecCCCcCCCeeEEEEEe--CCeEEEEecCCCCCCCCCCccccccccEEecCCcceeec---------
Q 012222 16 SNTVFKSGPLFISSKGIGWKSWKKRWFILT--RTSLVFFKNDPSALPQRGGEVNLTLGGIDLNNSGSVVVR--------- 84 (468)
Q Consensus 16 ~~~v~k~G~L~~~k~g~~~k~WkkRwfVL~--~~~L~yyk~~~~~~~~~~~~~~~~l~~i~l~~~~~v~~~--------- 84 (468)
...++++|||+ |+|...+.|++|||||+ ++.|+||+++.+..| .+.|.|..+..+...
T Consensus 5 ~~~~~~~G~L~--K~g~~~~~Wk~R~fvL~~~~~~L~yy~~~~~~~~---------~g~i~L~~~~~v~~~~~~~~~~~~ 73 (117)
T 1v5u_A 5 SSGRSYEGILY--KKGAFMKPWKARWFVLDKTKHQLRYYDHRMDTEC---------KGVIDLAEVEAVAPGTPTIGAPKT 73 (117)
T ss_dssp CCSSSEEEEEE--ECCCSSSCCEEEEEEEETTTTEEEEESSSSCSSC---------CCEEEGGGEEEEECCCCCTTSCSS
T ss_pred cCCccEEEEEE--ecCCCCCCceeeEEEEECCCCEEEEeecCCCCcc---------ceEEEccCcEEEeecCcccccccc
Confidence 45689999776 66666899999999999 889999999877653 334555544333211
Q ss_pred CCCceeEEEEecCCCCcEEEEEeCCHHHHHHHHHHHHHHHHhCCc
Q 012222 85 EDKKLLTVLFPDGRDGRAFTLKAETSEDLYEWKTALELALAQAPS 129 (468)
Q Consensus 85 ~~k~~~f~i~~~~~~~r~y~l~A~s~~e~~~Wi~aI~~ai~~~p~ 129 (468)
..+.++|.|.. .+++|+|+|+|++|+.+|+.+|+.++..+|+
T Consensus 74 ~~~~~~F~i~~---~~r~~~l~a~s~~e~~~Wi~al~~~i~~~~~ 115 (117)
T 1v5u_A 74 VDEKAFFDVKT---TRRVYNFCAQDVPSAQQWVDRIQSCLSSGPS 115 (117)
T ss_dssp SCTTTCEEEEE---SSCEEEEECSSHHHHHHHHHHHHTTCCCCCC
T ss_pred CCCCeEEEEEC---CCceEEEECCCHHHHHHHHHHHHHHhccCCC
Confidence 23447888854 5789999999999999999999999876653
No 31
>2lul_A Tyrosine-protein kinase TEC; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, transferase; NMR {Homo sapiens}
Probab=99.75 E-value=1.5e-17 Score=148.81 Aligned_cols=114 Identities=16% Similarity=0.198 Sum_probs=80.5
Q ss_pred CCceEEEeeeeeeecCC---CcCCCeeEEEEEeCCeEEEEecCCCCCCCCCCccccccccEEecCCcceeec--------
Q 012222 16 SNTVFKSGPLFISSKGI---GWKSWKKRWFILTRTSLVFFKNDPSALPQRGGEVNLTLGGIDLNNSGSVVVR-------- 84 (468)
Q Consensus 16 ~~~v~k~G~L~~~k~g~---~~k~WkkRwfVL~~~~L~yyk~~~~~~~~~~~~~~~~l~~i~l~~~~~v~~~-------- 84 (468)
...++++|||+++..+. ..++||+|||||+++.|+||+++.+..+ +.+.|.|..+..|...
T Consensus 12 ~~~~i~EG~L~Kr~~~kk~~~~knWKkRwFVL~~~~L~Yyk~~~~~~~--------~~G~I~L~~~~~v~~~~~~~~~~~ 83 (164)
T 2lul_A 12 NFNTILEEILIKRSQQKKKTSPLNYKERLFVLTKSMLTYYEGRAEKKY--------RKGFIDVSKIKCVEIVKNDDGVIP 83 (164)
T ss_dssp CSSEEEEEEEEEECCCCSSSCCCCEEEEEEEEESSEEEEECCCSSSCC--------CCCEEEGGGCCEEEECCCCSSSCC
T ss_pred CCCeeEEEEEEEecCCCCCCCCCCceeEEEEEECCEEEEEeccCcccc--------cccEEEEeeeEEEEeccccccCcc
Confidence 45899999998664432 2568999999999999999998765442 2334555544433211
Q ss_pred CCCceeEEEEecCCCCcEEEEEeCCHHHHHHHHHHHHHHHHhCCcchhccCCCCccC
Q 012222 85 EDKKLLTVLFPDGRDGRAFTLKAETSEDLYEWKTALELALAQAPSAALVMGHNGIFR 141 (468)
Q Consensus 85 ~~k~~~f~i~~~~~~~r~y~l~A~s~~e~~~Wi~aI~~ai~~~p~~~~~~~~~~~~~ 141 (468)
....++|.+.. ..|+|+|+|+|++|+++||+||+++|+.+++... .-+.|.+.
T Consensus 84 ~~~~~~f~i~t---~~rt~~l~A~s~~e~~~Wi~aL~~~i~~n~~~~~-~yHpg~~~ 136 (164)
T 2lul_A 84 CQNKYPFQVVH---DANTLYIFAPSPQSRDLWVKKLKEEIKNNNNIMI-KYHPKFWT 136 (164)
T ss_dssp SSSCSEEEEEC---SSCEEEEECSSHHHHHHHHHHHHHHHTTCSCCCS-EECCSCCC
T ss_pred cccceeEEEec---CCcEEEEECCCHHHHHHHHHHHHHHHHHChhhhh-hcCCCccc
Confidence 23446776654 4689999999999999999999999997765431 22445553
No 32
>1v5p_A Pleckstrin homology domain-containing, family A; TAPP2, the pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=99.74 E-value=1e-17 Score=143.11 Aligned_cols=97 Identities=23% Similarity=0.312 Sum_probs=72.3
Q ss_pred ceEEEeeeeeeecC-CCcCCCeeEEEEEe---CCeEEEEecCC----CCCCCCCCccccccccEEecCCcceeec-----
Q 012222 18 TVFKSGPLFISSKG-IGWKSWKKRWFILT---RTSLVFFKNDP----SALPQRGGEVNLTLGGIDLNNSGSVVVR----- 84 (468)
Q Consensus 18 ~v~k~G~L~~~k~g-~~~k~WkkRwfVL~---~~~L~yyk~~~----~~~~~~~~~~~~~l~~i~l~~~~~v~~~----- 84 (468)
...++|||+ |+| ...+.|+||||||+ +..|+||+++. +.. ++|.|.|..+..|...
T Consensus 14 ~~~~~G~L~--K~g~~~~k~WkrRwFvL~~~~~~~L~Y~k~~~~~~~~~~---------~~G~I~L~~~~~V~~~~~~~~ 82 (126)
T 1v5p_A 14 QNRICGFLD--IEDNENSGKFLRRYFILDTQANCLLWYMDNPQNLAVGAG---------AVGSLQLTYISKVSIATPKQK 82 (126)
T ss_dssp CCCEECCEE--EECTTCSSCEEEEEEEEETTTTEEEEESSCTTTSCTTCC---------CSEEEETTTCCEEEECCTTTS
T ss_pred CCceEEEEE--EeCCCCCCCccceEEEEecCCCCEEEEECCCCCCCCCce---------eeEEEECCCccEEecCCcccC
Confidence 446899776 554 45899999999999 56778888843 332 5667777776555432
Q ss_pred CCCceeEEEEecCCCCcEEEEEeCCHHHHHHHHHHHHHHHHhCC
Q 012222 85 EDKKLLTVLFPDGRDGRAFTLKAETSEDLYEWKTALELALAQAP 128 (468)
Q Consensus 85 ~~k~~~f~i~~~~~~~r~y~l~A~s~~e~~~Wi~aI~~ai~~~p 128 (468)
..+++||+|.. ..|+|+|+|+|++|+++||++|+.|+...|
T Consensus 83 ~~~~~~F~i~t---~~r~y~l~A~s~~e~~~Wi~al~~a~~~~~ 123 (126)
T 1v5p_A 83 PKTPFCFVINA---LSQRYFLQANDQKDLKDWVEALNQASKSGP 123 (126)
T ss_dssp CSCSSEEEEEC---SSCEEEEECSSHHHHHHHHHHHHHTTTTSS
T ss_pred CCCCEEEEEEC---CCEEEEEECCCHHHHHHHHHHHHHHHhcCC
Confidence 24457887643 469999999999999999999999886543
No 33
>2cod_A Centaurin-delta 1; ARF GAP and RHO GAP with ankyrin repeat and PH domains (ARAP) 2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.74 E-value=1.3e-17 Score=139.88 Aligned_cols=97 Identities=25% Similarity=0.357 Sum_probs=77.2
Q ss_pred CCCceEEEeeeeeeecCC-CcCCCeeEEEEEeCCeEEEEecCCCCCCCCCCccccccccEEecCCcceeecCCCceeEEE
Q 012222 15 ASNTVFKSGPLFISSKGI-GWKSWKKRWFILTRTSLVFFKNDPSALPQRGGEVNLTLGGIDLNNSGSVVVREDKKLLTVL 93 (468)
Q Consensus 15 ~~~~v~k~G~L~~~k~g~-~~k~WkkRwfVL~~~~L~yyk~~~~~~~~~~~~~~~~l~~i~l~~~~~v~~~~~k~~~f~i 93 (468)
.+..++++|||+ |+|. ..+.|++|||||+++.|+||+++.+.. +.+.|.|..+..|.... +++|.|
T Consensus 4 ~~~~~~~~G~L~--K~~~~~~~~WkkR~fvL~~~~L~yy~~~~~~~---------~~g~i~l~~~~~v~~~~--~~~F~i 70 (115)
T 2cod_A 4 GSSGKVKSGWLD--KLSPQGKRMFQKRWVKFDGLSISYYNNEKEMY---------SKGIIPLSAISTVRVQG--DNKFEV 70 (115)
T ss_dssp CCSCCCEEEEEE--ECCSSSSSCCEEEEEEECSSEEEEEESSCCSS---------CCCEEETTTEEEEEEET--TTEEEE
T ss_pred CCCCccEEEEEE--EcCCCCCCCCceEEEEEECCEEEEEcCCCCcc---------cCCEEECCcceEEEeCC--CCEEEE
Confidence 345789999776 5555 578999999999999999999987755 34567777665554433 567877
Q ss_pred EecCCCCcEEEEEeCCHHHHHHHHHHHHHHHHhC
Q 012222 94 FPDGRDGRAFTLKAETSEDLYEWKTALELALAQA 127 (468)
Q Consensus 94 ~~~~~~~r~y~l~A~s~~e~~~Wi~aI~~ai~~~ 127 (468)
.. .+|+|+|+|+|++|+.+|+.+|+.++...
T Consensus 71 ~~---~~r~~~l~a~s~~e~~~Wi~~l~~~~~~~ 101 (115)
T 2cod_A 71 VT---TQRTFVFRVEKEEERNDWISILLNALKSQ 101 (115)
T ss_dssp EE---SSCCEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred Ee---CCcEEEEECCCHHHHHHHHHHHHHHHHhC
Confidence 63 47899999999999999999999999643
No 34
>1eaz_A Tandem PH domain containing protein-1; lipid-binding protein, lipid degradation, phosphatidylinositol (3, 4)-bisphosphate, signalling; HET: CIT; 1.40A {Homo sapiens} SCOP: b.55.1.1
Probab=99.74 E-value=1.2e-17 Score=142.06 Aligned_cols=103 Identities=25% Similarity=0.445 Sum_probs=78.5
Q ss_pred CCCCCCCceEEEeeeeeeecCCCcCCCeeEEEEEeCCeEEEEecCCCCCCCCCCccccccccEEecCCcceeec-----C
Q 012222 11 PRPGASNTVFKSGPLFISSKGIGWKSWKKRWFILTRTSLVFFKNDPSALPQRGGEVNLTLGGIDLNNSGSVVVR-----E 85 (468)
Q Consensus 11 ~~~~~~~~v~k~G~L~~~k~g~~~k~WkkRwfVL~~~~L~yyk~~~~~~~~~~~~~~~~l~~i~l~~~~~v~~~-----~ 85 (468)
+.......++++|||+ |+|...+.|++|||||+++.|+||+++.+.. +.+.|.|..+..+... .
T Consensus 6 ~~~~~~~~~~~~G~L~--K~g~~~~~Wk~R~fvL~~~~L~yy~~~~~~~---------~~g~i~l~~~~~v~~~~~~~~~ 74 (125)
T 1eaz_A 6 PKPPQDSAVIKAGYCV--KQGAVMKNWKRRYFQLDENTIGYFKSELEKE---------PLRVIPLKEVHKVQECKQSDIM 74 (125)
T ss_dssp ------CCCSEEEEEE--EECTTTCCEEEEEEEECSSEEEEESSTTCSS---------CSEEEEGGGCCEEEECTTHHHH
T ss_pred CCCCCCCCccEEEEEE--EeCCCCCCcceEEEEEeCCEEEEEcCCCCCc---------ceeEEEcccceEEeeccccccC
Confidence 3344456889999876 5566789999999999999999999987755 4456777766555432 2
Q ss_pred CCceeEEEEecCCCCcEEEEEeCCHHHHHHHHHHHHHHHHhC
Q 012222 86 DKKLLTVLFPDGRDGRAFTLKAETSEDLYEWKTALELALAQA 127 (468)
Q Consensus 86 ~k~~~f~i~~~~~~~r~y~l~A~s~~e~~~Wi~aI~~ai~~~ 127 (468)
.+.++|.|.. .+++|+|+|+|++|+.+|+.+|+.++...
T Consensus 75 ~~~~~F~i~~---~~r~~~l~a~s~~e~~~W~~al~~~i~~~ 113 (125)
T 1eaz_A 75 MRDNLFEIVT---TSRTFYVQADSPEEMHSWIKAVSGAIVAQ 113 (125)
T ss_dssp TCSSEEEEEC---SSCEEEEECSSHHHHHHHHHHHHHHHHHT
T ss_pred CcCCEEEEEe---CCcEEEEEcCCHHHHHHHHHHHHHHHHhc
Confidence 4567888864 47899999999999999999999999754
No 35
>2i5f_A Pleckstrin; PH domain, protein-inositol phosphate complex, lipid binding protein; HET: 5IP; 1.35A {Homo sapiens} SCOP: b.55.1.1 PDB: 2i5c_A* 1zm0_A
Probab=99.74 E-value=2.1e-17 Score=137.06 Aligned_cols=96 Identities=27% Similarity=0.447 Sum_probs=73.3
Q ss_pred CCceEEEeeeeeeecCCCcCCCeeEEEEEeCC--eEEEEecCCCCCCCCCCccccccccEEecCCcceeecC-------C
Q 012222 16 SNTVFKSGPLFISSKGIGWKSWKKRWFILTRT--SLVFFKNDPSALPQRGGEVNLTLGGIDLNNSGSVVVRE-------D 86 (468)
Q Consensus 16 ~~~v~k~G~L~~~k~g~~~k~WkkRwfVL~~~--~L~yyk~~~~~~~~~~~~~~~~l~~i~l~~~~~v~~~~-------~ 86 (468)
...++++|||+ |+|...++|++|||||+++ .|+||+++.+.. +.+.|.|..+..+.... .
T Consensus 4 ~~~~~~~G~L~--K~g~~~~~Wk~R~fvL~~~~~~L~yyk~~~~~~---------~~g~i~L~~~~v~~~~~~~~~~~~~ 72 (109)
T 2i5f_A 4 TGVIIKQGCLL--KQGHRRKNWKVRKFILREDPAYLHYYDPAGAED---------PLGAIHLRGCVVTSVESNSNGRKSE 72 (109)
T ss_dssp CCCEEEEEEEE--EECTTTCCEEEEEEEEETTTTEEEEECTTSCSS---------CSEEEECTTCEEEEECC--------
T ss_pred cCceeEEEEEE--EcCCCCCCceEEEEEEeCCCcEEEEECCCCCCC---------ccEEEECCCCEEEEccCCcccccCC
Confidence 45789999776 5666788999999999976 999999886655 34456666643222211 2
Q ss_pred CceeEEEEecCCCCcEEEEEeCCHHHHHHHHHHHHHHH
Q 012222 87 KKLLTVLFPDGRDGRAFTLKAETSEDLYEWKTALELAL 124 (468)
Q Consensus 87 k~~~f~i~~~~~~~r~y~l~A~s~~e~~~Wi~aI~~ai 124 (468)
+.++|.|.. +++++|+|+|+|++|+.+|+.+|+.++
T Consensus 73 ~~~~F~i~~--~~~~~~~l~a~s~~e~~~Wi~ai~~~~ 108 (109)
T 2i5f_A 73 EENLFEIIT--ADEVHYFLQAATPKERTEWIKAIQMAS 108 (109)
T ss_dssp CCSEEEEEC--TTCCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred CceEEEEEe--CCCCEEEEEcCCHHHHHHHHHHHHHHh
Confidence 567887764 456889999999999999999999987
No 36
>1fgy_A GRP1; PH domain, signaling protein; HET: 4IP; 1.50A {Mus musculus} SCOP: b.55.1.1 PDB: 1fgz_A 1u2b_A 1fhw_A* 1fhx_A* 1u29_A* 1u27_A*
Probab=99.74 E-value=2.1e-17 Score=140.83 Aligned_cols=102 Identities=25% Similarity=0.408 Sum_probs=78.0
Q ss_pred CceEEEeeeeeeecCCCcCCCeeEEEEEeCCeEEEEecCCCCCCCCCCccccccccEEecCCcceee-cCCCceeEEEEe
Q 012222 17 NTVFKSGPLFISSKGIGWKSWKKRWFILTRTSLVFFKNDPSALPQRGGEVNLTLGGIDLNNSGSVVV-REDKKLLTVLFP 95 (468)
Q Consensus 17 ~~v~k~G~L~~~k~g~~~k~WkkRwfVL~~~~L~yyk~~~~~~~~~~~~~~~~l~~i~l~~~~~v~~-~~~k~~~f~i~~ 95 (468)
..++++|||+ |+|+..++|++|||||+++.|+||+++.+.. +.+.|.|..+..+.. ...++++|.|..
T Consensus 3 ~~~~~~G~L~--K~g~~~~~Wk~R~fvL~~~~L~yy~~~~~~~---------~~g~i~L~~~~v~~~~~~~~~~~f~i~~ 71 (127)
T 1fgy_A 3 FNPDREGWLL--KLGGRVKTWKRRWFILTDNCLYYFEYTTDKE---------PRGIIPLENLSIREVLDPRKPNCFELYN 71 (127)
T ss_dssp SSCSEEEEEE--EECSSSCCEEEEEEEEETTEEEEESSTTCSS---------CSEEEECTTCEEEEECCSSCSSEEEEEC
T ss_pred CCCceEeEEE--EECCCCCCeEEEEEEEECCEEEEeCCCCCCC---------cceEEECCceEEEEccCCCCCceEEEec
Confidence 3578999776 5566689999999999999999999987655 345666666543222 235567888764
Q ss_pred cCC-------------------CCcEEEEEeCCHHHHHHHHHHHHHHHHhCCc
Q 012222 96 DGR-------------------DGRAFTLKAETSEDLYEWKTALELALAQAPS 129 (468)
Q Consensus 96 ~~~-------------------~~r~y~l~A~s~~e~~~Wi~aI~~ai~~~p~ 129 (468)
... ..|+|+|+|+|++|+++|+.+|+.++.+.|.
T Consensus 72 ~~~~~~~~~~~~~~~~~~~v~~~~r~~~l~a~s~~e~~~Wi~al~~~i~~~~~ 124 (127)
T 1fgy_A 72 PSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISRDPF 124 (127)
T ss_dssp SSSTTCCCCCEEECTTSCEEECCCSEEEEECSSHHHHHHHHHHHHHHHHHCTT
T ss_pred CCccccccccccccCCcceecCCceEEEEECCCHHHHHHHHHHHHHHhccCCc
Confidence 321 2479999999999999999999999987654
No 37
>1btk_A Bruton'S tyrosine kinase; transferase, PH domain, BTK motif, zinc binding, X-linked agammaglobulinemia, tyrosine-protein kinase; 1.60A {Homo sapiens} SCOP: b.55.1.1 PDB: 1b55_A* 2z0p_A* 1bwn_A*
Probab=99.73 E-value=7.9e-18 Score=151.27 Aligned_cols=100 Identities=18% Similarity=0.214 Sum_probs=73.0
Q ss_pred ceEEEeeeeeeecCC---CcCCCeeEEEEEeCCeEEEEecC----CCCCCCCCCccccccccEEecCCcceeec---CC-
Q 012222 18 TVFKSGPLFISSKGI---GWKSWKKRWFILTRTSLVFFKND----PSALPQRGGEVNLTLGGIDLNNSGSVVVR---ED- 86 (468)
Q Consensus 18 ~v~k~G~L~~~k~g~---~~k~WkkRwfVL~~~~L~yyk~~----~~~~~~~~~~~~~~l~~i~l~~~~~v~~~---~~- 86 (468)
.++|+|||+++..+. .+++||+|||||+++.|+||+++ .+.. +.+.|.|..+..|... ++
T Consensus 2 ~vikeG~L~Kr~~~~~~~~~k~WKkRwFVL~~~~L~Yyk~~~~~~~~~~---------~~G~I~L~~~~~ve~~~~~~~~ 72 (169)
T 1btk_A 2 AVILESIFLKRSQQKKKTSPLNFKKCLFLLTVHKLSYYEYDFERGRRGS---------KKGSIDVEKITCVETVVPEKNP 72 (169)
T ss_dssp CCCEEEEEEEECCCSSTTCCCCEEEEEEEECSSEEEEEEEETTTTEEEE---------EEEEEEGGGEEEEEECCCCSSC
T ss_pred ceEEEEEEEEecCCCCCcccCCCceEEEEEcCCEEEEEecCCccCCCCc---------eeeEEECcceEEEEeccCCCCc
Confidence 578999887654443 25899999999999999999984 3333 4556666654433222 11
Q ss_pred ---Cc---------------------eeEEEEecCCCCcEEEEEeCCHHHHHHHHHHHHHHHHhCCc
Q 012222 87 ---KK---------------------LLTVLFPDGRDGRAFTLKAETSEDLYEWKTALELALAQAPS 129 (468)
Q Consensus 87 ---k~---------------------~~f~i~~~~~~~r~y~l~A~s~~e~~~Wi~aI~~ai~~~p~ 129 (468)
+. ++|.|.. ..++|+|+|+|++|+++||++|+.++...|.
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~F~I~t---~~rt~yl~A~s~~E~~eWi~aI~~~i~~n~~ 136 (169)
T 1btk_A 73 PPERQIPRRGEESSEMEQISIIERFPYPFQVVY---DEGPLYVFSPTEELRKRWIHQLKNVIRYNSD 136 (169)
T ss_dssp CGGGCC---------CCTTHHHHCCCEEEEEEE---TTCCEEEEESCHHHHHHHHHHHHHHHTTCSC
T ss_pred chhcccccccCcccccccccccccccccEEEEe---CCceEEEEcCCHHHHHHHHHHHHHHHHHCcc
Confidence 11 6776654 3489999999999999999999999986654
No 38
>3cxb_B Pleckstrin homology domain-containing family M member 2; SIFA, SKIP, complex, virulence, cytoplasm, membrane, polymorphism, signaling protein; 2.60A {Homo sapiens} PDB: 3hw2_B
Probab=99.73 E-value=1.4e-17 Score=139.38 Aligned_cols=96 Identities=20% Similarity=0.349 Sum_probs=71.4
Q ss_pred EEEeeeeeeecC--CCcCCCeeEEEEEeCCeEEEEecCCCCCCCCCCccccccccEEecCCcce--e--ecCCCceeEEE
Q 012222 20 FKSGPLFISSKG--IGWKSWKKRWFILTRTSLVFFKNDPSALPQRGGEVNLTLGGIDLNNSGSV--V--VREDKKLLTVL 93 (468)
Q Consensus 20 ~k~G~L~~~k~g--~~~k~WkkRwfVL~~~~L~yyk~~~~~~~~~~~~~~~~l~~i~l~~~~~v--~--~~~~k~~~f~i 93 (468)
.|+|||+++..+ ...++|++|||||+++.|+|||++.+..| .+.|+|...... . ....++++|.|
T Consensus 1 tkeG~L~kK~g~~~~~~k~Wk~rwfvL~~~~L~~yk~~~~~~p---------~~~i~l~~~~~~~~~~~~~~~r~~~F~l 71 (112)
T 3cxb_B 1 TKEGMLHYKAGTSYLGKEHWKTCFVVLSNGILYQYPDRTDVIP---------LLSVNMGGEQCGGCRRANTTDRPHAFQV 71 (112)
T ss_dssp CEEEEEEECCSCCCSSCCCCEEEEEEEETTEEEEESSSSCCSC---------SEEEETTC-CEEEEEECCCSSCTTEEEE
T ss_pred CceEEEEEeCCCCCCCCCCceEEEEEEECCEEEEECCCCCCCc---------cceEEecCCEEEeeeccCCCCCCeEEEE
Confidence 389988644222 15789999999999999999999877653 345555532211 1 23456688888
Q ss_pred EecCCCCcEEEEEeCCHHHHHHHHHHHHHHHHh
Q 012222 94 FPDGRDGRAFTLKAETSEDLYEWKTALELALAQ 126 (468)
Q Consensus 94 ~~~~~~~r~y~l~A~s~~e~~~Wi~aI~~ai~~ 126 (468)
.. +++++|+|+|+|++||++||.+|+.++..
T Consensus 72 ~~--~~~~~y~f~A~s~ee~~~Wi~ai~~~~~~ 102 (112)
T 3cxb_B 72 IL--SDRPCLELSAESEAEMAEWMQHLCQAVSK 102 (112)
T ss_dssp EE--TTSCCEEEECSSHHHHHHHHHHHHHHHTC
T ss_pred Ec--CCCCEEEEEcCCHHHHHHHHHHHHHHhhc
Confidence 64 45789999999999999999999999974
No 39
>4a6h_A Phosphatidylinositol 4,5-bisphosphate-binding Pro SLM1; signaling protein; HET: I4C; 1.45A {Saccharomyces cerevisiae} PDB: 3nsu_A* 4a6f_A* 4a6k_A* 4a6f_B* 4a5k_A
Probab=99.73 E-value=1.2e-17 Score=141.22 Aligned_cols=98 Identities=21% Similarity=0.262 Sum_probs=70.0
Q ss_pred eEEEeeeeeeecCCCcCCCeeEEEEEeCCeEEEEecCCCCCCCCCCccccccccEEecCCcceeecC--C--------Cc
Q 012222 19 VFKSGPLFISSKGIGWKSWKKRWFILTRTSLVFFKNDPSALPQRGGEVNLTLGGIDLNNSGSVVVRE--D--------KK 88 (468)
Q Consensus 19 v~k~G~L~~~k~g~~~k~WkkRwfVL~~~~L~yyk~~~~~~~~~~~~~~~~l~~i~l~~~~~v~~~~--~--------k~ 88 (468)
++++|||+ |+|...++|++|||||+++.|+|||++..... .. +++.|.|..|....... . +.
T Consensus 6 ~~k~G~L~--Kk~~~~k~W~~rwfVL~~~~L~yyK~~~~~~d-~~-----P~gsI~L~~c~v~~~~~~~~~~~~~~~~~~ 77 (120)
T 4a6h_A 6 EIKSGFLE--RRSKFLKSYSKGYYVLTPNFLHEFKTADRKKD-LV-----PVMSLALSECTVTEHSRKNSTSSPNSTGSD 77 (120)
T ss_dssp CSEEEEEE--EEETTTTEEEEEEEEECSSEEEEESSCCTTTC-CS-----CSEEEEGGGEEEEEECCCCC---------C
T ss_pred ccEEEEEE--EcCCCCCCCccEEEEEeCCEEEEEcCCCcCcC-CC-----ceEEEECCCCEEEEcccccccccccccCCC
Confidence 89999886 55556889999999999999999998753211 01 34455554443222111 1 56
Q ss_pred eeEEEEecCCC----CcEEEEEeCCHHHHHHHHHHHHHHH
Q 012222 89 LLTVLFPDGRD----GRAFTLKAETSEDLYEWKTALELAL 124 (468)
Q Consensus 89 ~~f~i~~~~~~----~r~y~l~A~s~~e~~~Wi~aI~~ai 124 (468)
++|.|...... +++|+|+|+|.+|+++|+++|+.++
T Consensus 78 ~~F~i~~~~~~~~~~~~~y~f~A~s~~e~~~Wv~aI~~~~ 117 (120)
T 4a6h_A 78 AKFVLHAKQNGIIRRGHNWVFKADSYESMMSWFDNLKILT 117 (120)
T ss_dssp CEEEEEESSSSSSCTTCEEEEECSSHHHHHHHHHHHHHHC
T ss_pred cEEEEEeCCCCcccCceEEEEEcCCHHHHHHHHHHHHHHh
Confidence 77888764432 4699999999999999999999875
No 40
>2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.73 E-value=2.5e-17 Score=137.87 Aligned_cols=98 Identities=24% Similarity=0.427 Sum_probs=78.0
Q ss_pred CCceEEEeeeeeeecCCCcCCCeeEEEEEeCCeEEEEecCCCCCCCCCCccccccccEEecCCcceeec---CCCceeEE
Q 012222 16 SNTVFKSGPLFISSKGIGWKSWKKRWFILTRTSLVFFKNDPSALPQRGGEVNLTLGGIDLNNSGSVVVR---EDKKLLTV 92 (468)
Q Consensus 16 ~~~v~k~G~L~~~k~g~~~k~WkkRwfVL~~~~L~yyk~~~~~~~~~~~~~~~~l~~i~l~~~~~v~~~---~~k~~~f~ 92 (468)
+..++++|||+ |+|...+.|++|||||+++.|+||+++.+.. +.+.|.|..+..+... ..++++|.
T Consensus 5 ~~~~~~~G~L~--K~~~~~~~Wk~R~fvL~~~~L~yy~~~~~~~---------~~g~i~L~~~~~v~~~~~~~~~~~~F~ 73 (115)
T 2dn6_A 5 SSGVLKQGYMM--KKGHRRKNWTERWFVLKPNIISYYVSEDLKD---------KKGDILLDENCCVESLPDKDGKKCLFL 73 (115)
T ss_dssp CCSCSEEEEEE--EECTTSSCEEEEEEEECSSCEEEESSTTCSS---------EEEEECCCTTCEEEEECCCTTCCSEEE
T ss_pred CCCceEEEEEE--ecCCCCCCcEEeEEEEECCEEEEeCCCCCcc---------cCcEEEecCcEEEEECCCCCCCeeEEE
Confidence 45789999776 5666789999999999999999999887655 4556777765544332 34557888
Q ss_pred EEecCCCCcEEEEEeCCHHHHHHHHHHHHHHHHhC
Q 012222 93 LFPDGRDGRAFTLKAETSEDLYEWKTALELALAQA 127 (468)
Q Consensus 93 i~~~~~~~r~y~l~A~s~~e~~~Wi~aI~~ai~~~ 127 (468)
|.. .+++|+|+|+|++|+.+|+.+|+.++...
T Consensus 74 i~~---~~r~~~l~a~s~~e~~~Wi~ai~~~~~~~ 105 (115)
T 2dn6_A 74 VKC---FDKTFEISASDKKKKQEWIQAIHSTIHLL 105 (115)
T ss_dssp EEC---SSCEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred EEe---CCCEEEEEcCCHHHHHHHHHHHHHHHHHH
Confidence 864 46899999999999999999999999754
No 41
>3a8p_A T-lymphoma invasion and metastasis-inducing protein 2; guanine nucleotide exchange factor, alternative splicing, cell projection, coiled coil; 2.10A {Mus musculus} PDB: 3a8q_A
Probab=99.73 E-value=1.7e-19 Score=173.30 Aligned_cols=108 Identities=22% Similarity=0.299 Sum_probs=75.7
Q ss_pred CCceEEEeeeeee------ecCCC----cCCCeeEEEEEeCCeEEEEecCCCCCCCCCCccccccccEEecCCcceeec-
Q 012222 16 SNTVFKSGPLFIS------SKGIG----WKSWKKRWFILTRTSLVFFKNDPSALPQRGGEVNLTLGGIDLNNSGSVVVR- 84 (468)
Q Consensus 16 ~~~v~k~G~L~~~------k~g~~----~k~WkkRwfVL~~~~L~yyk~~~~~~~~~~~~~~~~l~~i~l~~~~~v~~~- 84 (468)
...++|+|||+++ |+|.. .++|++|||||+++.|+|||+++..... .-..+.+.|.|..+......
T Consensus 8 ~~~v~K~G~L~~k~~~~~~K~g~~~~~~~K~WkrRWfVL~~~~L~yyK~~~~~~~~---~~~~p~g~I~L~~~~v~~~~~ 84 (263)
T 3a8p_A 8 QGVVRKAGWLFFKPLVTLQKERKLELVARRKWKQYWVTLKGCTLLFYETYGKNSTE---QNSAPRCALFAEDSIVQSVPE 84 (263)
T ss_dssp --CEEEEEEEEEEEEEEEEGGGEEEECTTCCCEEEEEEEETTEEEEESSCCC---------CCCSEEEECTTCEEEECTT
T ss_pred CCCeEEEEEeeecccccccCCCCccCccCCCceEEEEEEcCCEEEEEecCcccccc---cccCccceEEcCCcEEEECCc
Confidence 3578999999832 44544 7899999999999999999986421100 00114456666644322222
Q ss_pred -CCCceeEEEEecCCCCcEEEEEeCCHHHHHHHHHHHHHHHHhCC
Q 012222 85 -EDKKLLTVLFPDGRDGRAFTLKAETSEDLYEWKTALELALAQAP 128 (468)
Q Consensus 85 -~~k~~~f~i~~~~~~~r~y~l~A~s~~e~~~Wi~aI~~ai~~~p 128 (468)
..++++|.|.. .++++|+|+|+|++|+++||.+|+.++...+
T Consensus 85 ~~kk~~~F~I~t--~~~r~y~f~A~s~ee~~~Wi~aI~~a~~~~~ 127 (263)
T 3a8p_A 85 HPKKEHVFCLSN--SCGDVYLFQATSQTDLENWVTAIHSACASLF 127 (263)
T ss_dssp CSSCSSEEEEEC--TTSCEEEEECSSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEEc--CCCcEEEEEcCCHHHHHHHHHHHHHHHHhcc
Confidence 23567888764 4679999999999999999999999998764
No 42
>1x05_A Pleckstrin; PH domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.55.1.1 PDB: 1xx0_A
Probab=99.73 E-value=4.8e-17 Score=139.30 Aligned_cols=100 Identities=26% Similarity=0.415 Sum_probs=76.2
Q ss_pred CCCceEEEeeeeeeecCCCcCCCeeEEEEEeCC--eEEEEecCCCCCCCCCCccccccccEEecCCcceeecC-------
Q 012222 15 ASNTVFKSGPLFISSKGIGWKSWKKRWFILTRT--SLVFFKNDPSALPQRGGEVNLTLGGIDLNNSGSVVVRE------- 85 (468)
Q Consensus 15 ~~~~v~k~G~L~~~k~g~~~k~WkkRwfVL~~~--~L~yyk~~~~~~~~~~~~~~~~l~~i~l~~~~~v~~~~------- 85 (468)
....++++|||+ |+|...+.|++|||||+++ .|+||+++.+.. +.+.|.|..+..+....
T Consensus 14 ~~~~~~~~G~L~--K~g~~~~~Wk~R~fvL~~~~~~L~yy~~~~~~~---------~~g~i~L~~~~v~~~~~~~~~~~~ 82 (129)
T 1x05_A 14 FRGVIIKQGCLL--KQGHRRKNWKVRKFILREDPAYLHYYDPAGAED---------PLGAIHLRGCVVTSVESNSNGRKS 82 (129)
T ss_dssp TCSEEEEEEEEE--ECCSSCCCCEEEEEEEEETTTEEEEECSSCCSS---------CSEEEECTTCEEEECCCCCCSSSC
T ss_pred ccCCceEEEEEE--ecCCCCCCCeeEEEEEeCCCCEEEEECCCCCCc---------ceeEEEccCCEEEEccCCcccccc
Confidence 356899999776 6676789999999999976 899999886655 34566666543222111
Q ss_pred CCceeEEEEecCCCCcEEEEEeCCHHHHHHHHHHHHHHHHhC
Q 012222 86 DKKLLTVLFPDGRDGRAFTLKAETSEDLYEWKTALELALAQA 127 (468)
Q Consensus 86 ~k~~~f~i~~~~~~~r~y~l~A~s~~e~~~Wi~aI~~ai~~~ 127 (468)
.+.++|.|.. +++++|+|+|+|++|+.+|+.+|+.++...
T Consensus 83 ~~~~~F~i~~--~~~~~~~l~a~s~~e~~~Wi~al~~~~~~~ 122 (129)
T 1x05_A 83 EEENLFEIIT--ADEVHYFLQAATPKERTEWIKAIQMASRTG 122 (129)
T ss_dssp SSCSEEEEEC--TTCCCCEEECSSHHHHHHHHHHHHHHHTCC
T ss_pred CCCeEEEEEc--CCCCEEEEECCCHHHHHHHHHHHHHHHHcc
Confidence 2567888764 456789999999999999999999999743
No 43
>1x1g_A Pleckstrin 2; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.72 E-value=3.2e-17 Score=140.28 Aligned_cols=100 Identities=24% Similarity=0.403 Sum_probs=74.3
Q ss_pred CCCCceEEEeeeeeeecCCCcCCCeeEEEEEe--CCeEEEEecC-CCCCCCCCCccccccccEEecCCcceeecCC----
Q 012222 14 GASNTVFKSGPLFISSKGIGWKSWKKRWFILT--RTSLVFFKND-PSALPQRGGEVNLTLGGIDLNNSGSVVVRED---- 86 (468)
Q Consensus 14 ~~~~~v~k~G~L~~~k~g~~~k~WkkRwfVL~--~~~L~yyk~~-~~~~~~~~~~~~~~l~~i~l~~~~~v~~~~~---- 86 (468)
.....++++|||+ |+|...+.|++|||||+ ++.|+||+++ .+.. +.+.|.|..+........
T Consensus 13 ~~~~~~~~~G~L~--K~g~~~~~Wk~R~fvL~~d~~~L~yy~~~~~~~~---------~~g~i~L~~~~v~~~~~~~~p~ 81 (129)
T 1x1g_A 13 ELSGTVVKQGYLA--KQGHKRKNWKVRRFVLRKDPAFLHYYDPSKEENR---------PVGGFSLRGSLVSALEDNGVPT 81 (129)
T ss_dssp TTCSEEEEEEEEE--EECSSSSSEEEEEEEEEESSCEEEEECSSSCCSS---------CSCCEESTTCCCEECCSSSSCS
T ss_pred ccCCCEEEEEEEE--EECCCCCCeeeEEEEEeCCCCeEEEeCCCCcCCc---------cceEEECcCCEEEEeCCCCCcc
Confidence 4456899999776 55666899999999999 4799999987 4444 344566665432221111
Q ss_pred ------CceeEEEEecCCCCcEEEEEeCCHHHHHHHHHHHHHHHHh
Q 012222 87 ------KKLLTVLFPDGRDGRAFTLKAETSEDLYEWKTALELALAQ 126 (468)
Q Consensus 87 ------k~~~f~i~~~~~~~r~y~l~A~s~~e~~~Wi~aI~~ai~~ 126 (468)
+.++|.|.. +++++|+|+|+|++|+++|+.+|+.++..
T Consensus 82 ~~~~~~~~~~F~I~~--~~~r~~~l~a~s~~e~~~Wi~al~~~~~~ 125 (129)
T 1x1g_A 82 GVKGNVQGNLFKVIT--KDDTHYYIQASSKAERAEWIEAIKKLTSG 125 (129)
T ss_dssp SCSSCCCSSCEEECC--TTCCCEEECCSSHHHHHHHHHHHHHHSSS
T ss_pred cccCCCCCceEEEEc--CCCCEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 457787754 45688999999999999999999999864
No 44
>1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin, inositol tetrakisphosphate signal transduction protein, adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP: b.55.1.1 PDB: 1fb8_A
Probab=99.72 E-value=3.8e-17 Score=139.31 Aligned_cols=98 Identities=31% Similarity=0.414 Sum_probs=79.8
Q ss_pred CCceEEEeeeeeeecCCCcCCCeeEEEEEeCCeEEEEecCCCCCCCCCCccccccccEEecCCcceeec--CCCceeEEE
Q 012222 16 SNTVFKSGPLFISSKGIGWKSWKKRWFILTRTSLVFFKNDPSALPQRGGEVNLTLGGIDLNNSGSVVVR--EDKKLLTVL 93 (468)
Q Consensus 16 ~~~v~k~G~L~~~k~g~~~k~WkkRwfVL~~~~L~yyk~~~~~~~~~~~~~~~~l~~i~l~~~~~v~~~--~~k~~~f~i 93 (468)
+..++++|||+ |+|+..+.|++|||||+++.|+||+++.+.. +.+.|.|..+..+... ..++++|.|
T Consensus 15 ~~~~~~~G~L~--K~g~~~~~Wk~R~fvL~~~~L~yy~~~~~~~---------~~g~i~L~~~~~v~~~~~~~~~~~F~i 83 (126)
T 1fao_A 15 PSLGTKEGYLT--KQGGLVKTWKTRWFTLHRNELKYFKDQMSPE---------PIRILDLTECSAVQFDYSQERVNCFCL 83 (126)
T ss_dssp CCTTCEEEEEE--EECSSSCCEEEEEEEEETTEEEEESSTTCSS---------CSEEEEGGGCCEEEEECSSSSSSEEEE
T ss_pred CCCccEEEEEE--EcCCCCCCcccEEEEEECCEEEEeCCCCCCC---------ceeEEEccceEEEEecccCCCCCEEEE
Confidence 45789999776 5666788999999999999999999987655 4557788777655443 345678888
Q ss_pred EecCCCCcEEEEEeCCHHHHHHHHHHHHHHHHhC
Q 012222 94 FPDGRDGRAFTLKAETSEDLYEWKTALELALAQA 127 (468)
Q Consensus 94 ~~~~~~~r~y~l~A~s~~e~~~Wi~aI~~ai~~~ 127 (468)
.. .+++|+|+|+|++|+.+|+.+|+.++...
T Consensus 84 ~~---~~r~~~l~a~s~~e~~~Wi~al~~~i~~~ 114 (126)
T 1fao_A 84 VF---PFRTFYLCAKTGVEADEWIKILRWKLSQI 114 (126)
T ss_dssp EE---TTEEEEEECSSHHHHHHHHHHHHHHHHTC
T ss_pred Ee---CCcEEEEECCCHHHHHHHHHHHHHHHHHH
Confidence 64 47999999999999999999999999863
No 45
>1u5d_A SKAP55, SRC kinase-associated phosphoprotein of 55 kDa; PH domain, signaling protein; 1.70A {Homo sapiens} SCOP: b.55.1.1
Probab=99.72 E-value=3.1e-17 Score=135.47 Aligned_cols=98 Identities=21% Similarity=0.385 Sum_probs=75.0
Q ss_pred ceEEEeeeeeeecCC--CcCCCeeEEEEEeCCeEEEEecCCCCCCCCCCccccccccEEecCCcceee-----cCCCcee
Q 012222 18 TVFKSGPLFISSKGI--GWKSWKKRWFILTRTSLVFFKNDPSALPQRGGEVNLTLGGIDLNNSGSVVV-----REDKKLL 90 (468)
Q Consensus 18 ~v~k~G~L~~~k~g~--~~k~WkkRwfVL~~~~L~yyk~~~~~~~~~~~~~~~~l~~i~l~~~~~v~~-----~~~k~~~ 90 (468)
.++++|||+++.++. ..+.|++|||||+++.|+||+++.+.. +.+.|.|..+..+.. ...++++
T Consensus 2 ~v~~~G~L~K~~~~~~~~~~~Wk~R~fvL~~~~L~yy~~~~~~~---------~~g~i~L~~~~v~~~~~~~~~~~~~~~ 72 (108)
T 1u5d_A 2 SVIKQGYLEKKSKDHSFFGSEWQKRWCVVSRGLFYYYANEKSKQ---------PKGTFLIKGYSVRMAPHLRRDSKKESC 72 (108)
T ss_dssp CEEEEEEEEEEEECSSSSCEEEEEEEEEEETTEEEEESSTTCSS---------CSEEEECTTCEEEECGGGCSSGGGGGE
T ss_pred CccEEEEEEEcCCCCCccccCceeeEEEEeCCEEEEecCCCCCC---------CCEEEEecceEEEeCCccccccCCcce
Confidence 589999998665543 238999999999999999999987755 344566665543221 2234578
Q ss_pred EEEEecCCCCcEEEEEeCCHHHHHHHHHHHHHHHHh
Q 012222 91 TVLFPDGRDGRAFTLKAETSEDLYEWKTALELALAQ 126 (468)
Q Consensus 91 f~i~~~~~~~r~y~l~A~s~~e~~~Wi~aI~~ai~~ 126 (468)
|.|.. +++++|+|+|+|++|+.+|+.+|+.++..
T Consensus 73 F~i~~--~~~r~~~l~a~s~~e~~~Wi~ai~~~i~~ 106 (108)
T 1u5d_A 73 FELTS--QDRRTYEFTATSPAEARDWVDQISFLLKD 106 (108)
T ss_dssp EEEEC--SSSCCEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred EEEEc--CCCcEEEEECCCHHHHHHHHHHHHHHHHh
Confidence 88764 44589999999999999999999999974
No 46
>2yry_A Pleckstrin homology domain-containing family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.72 E-value=7.3e-17 Score=136.60 Aligned_cols=99 Identities=27% Similarity=0.423 Sum_probs=74.6
Q ss_pred CCCceEEEeeeeeeecCCCcCCCeeEEEEEeCCeEEEEecCCCCCCCCCCccccccccEEecCCccee--e--cCCCcee
Q 012222 15 ASNTVFKSGPLFISSKGIGWKSWKKRWFILTRTSLVFFKNDPSALPQRGGEVNLTLGGIDLNNSGSVV--V--REDKKLL 90 (468)
Q Consensus 15 ~~~~v~k~G~L~~~k~g~~~k~WkkRwfVL~~~~L~yyk~~~~~~~~~~~~~~~~l~~i~l~~~~~v~--~--~~~k~~~ 90 (468)
+...++++|||+++.. ...+.|++|||||+++.|+||+++.+.. +.+.|.|..+.... . ...++++
T Consensus 18 ~~~~~~~~G~L~K~~~-~~~~~Wk~R~fvL~~~~L~yy~~~~~~~---------~~g~i~L~~~~v~~~~~~~~~~~~~~ 87 (122)
T 2yry_A 18 PNAPVTKAGWLFKQAS-SGVKQWNKRWFVLVDRCLFYYKDEKEES---------ILGSIPLLSFRVAAVQPSDNISRKHT 87 (122)
T ss_dssp TTCCEEEEEEEEEECC-SSSCCEEEEEEEEETTEEEEESSTTCCS---------CCEEEESTTCCCEECCTTCSCSSSSE
T ss_pred CCCCccEEEEEEEECC-CCCCCcEEEEEEEeCCEEEEECCCCCCC---------cccEEEcCCCEEEEcCccccCCcccE
Confidence 3457999998874432 3578999999999999999999987765 34456666543111 1 1245678
Q ss_pred EEEEecCCCCcEEEEEeCCHHHHHHHHHHHHHHHH
Q 012222 91 TVLFPDGRDGRAFTLKAETSEDLYEWKTALELALA 125 (468)
Q Consensus 91 f~i~~~~~~~r~y~l~A~s~~e~~~Wi~aI~~ai~ 125 (468)
|.|.. +++++|+|+|+|++|+.+|+.+|+.|++
T Consensus 88 F~i~~--~~~r~~~l~a~s~~e~~~Wi~al~~a~~ 120 (122)
T 2yry_A 88 FKAEH--AGVRTYFFSAESPEEQEAWIQAMGEAAR 120 (122)
T ss_dssp EEEEC--SSSCEEEEECSSHHHHHHHHHHHHHHHC
T ss_pred EEEec--CCCcEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 88753 4579999999999999999999999874
No 47
>2dkp_A Pleckstrin homology domain-containing family A member 5; PH domain, pleckstrin homology domain-containing protein family A member 5; NMR {Homo sapiens}
Probab=99.72 E-value=5.7e-17 Score=138.48 Aligned_cols=98 Identities=23% Similarity=0.430 Sum_probs=73.3
Q ss_pred CCCceEEEeeeeeeecCC-CcCCCeeEEEEEeCCeEEEEecCCCCCCCCCCccccccccEEecCCcceee----cCCCce
Q 012222 15 ASNTVFKSGPLFISSKGI-GWKSWKKRWFILTRTSLVFFKNDPSALPQRGGEVNLTLGGIDLNNSGSVVV----REDKKL 89 (468)
Q Consensus 15 ~~~~v~k~G~L~~~k~g~-~~k~WkkRwfVL~~~~L~yyk~~~~~~~~~~~~~~~~l~~i~l~~~~~v~~----~~~k~~ 89 (468)
+...++++|||+ |++. ..+.|++|||||+++.|+||+++.+..| .+.|.|..+..... ...+++
T Consensus 17 ~~~~~~~~G~L~--K~~~~~~~~Wk~R~fvL~~~~L~yy~~~~~~~~---------~g~i~L~~~~v~~~~~~~~~~~~~ 85 (128)
T 2dkp_A 17 PNAPVVRRGWLY--KQDSTGMKLWKKRWFVLSDLCLFYYRDEKEEGI---------LGSILLPSFQIALLTSEDHINRKY 85 (128)
T ss_dssp TTSCCCEEEEEE--EECCSSSCCEEEEEEEEETTEEEEESSTTCCSE---------EEEECGGGSEEEECCGGGCCSSCS
T ss_pred CCCCcEEEEEEE--EeCCCCCCCceeEEEEEeCCEEEEECCCCCccc---------ceEEEcCceEEEEcCCcccCCCCe
Confidence 456789999886 4444 5789999999999999999999877653 34455544321111 124567
Q ss_pred eEEEEecCCCCcEEEEEeCCHHHHHHHHHHHHHHHH
Q 012222 90 LTVLFPDGRDGRAFTLKAETSEDLYEWKTALELALA 125 (468)
Q Consensus 90 ~f~i~~~~~~~r~y~l~A~s~~e~~~Wi~aI~~ai~ 125 (468)
+|.|.. +++++|+|+|+|++|+.+|+.+|+.|+.
T Consensus 86 ~F~i~~--~~~r~~~l~a~s~~e~~~Wi~al~~a~~ 119 (128)
T 2dkp_A 86 AFKAAH--PNMRTYYFCTDTGKEMELWMKAMLDAAL 119 (128)
T ss_dssp EEEEEC--SSSCCEEEECSSHHHHHHHHHHHHHHHS
T ss_pred EEEEEc--CCCCEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 887764 4468999999999999999999999875
No 48
>1unq_A RAC-alpha serine/threonine kinase; transferase, pleckstrin homology domain, PKB, AKT, phosphoinositide, serine/threonine-protein kinase; HET: 4IP; 0.98A {Homo sapiens} SCOP: b.55.1.1 PDB: 1h10_A* 1unr_A 2uzs_A* 2uzr_A 2uvm_A* 1unp_A 2x18_A* 1p6s_A
Probab=99.72 E-value=1.5e-17 Score=141.70 Aligned_cols=106 Identities=21% Similarity=0.312 Sum_probs=78.3
Q ss_pred CceEEEeeeeeeecCCCcCCCeeEEEEEeC-CeEEEEecCCCCCCCCCCccccccccEEecCCcceeecCCCceeEEEEe
Q 012222 17 NTVFKSGPLFISSKGIGWKSWKKRWFILTR-TSLVFFKNDPSALPQRGGEVNLTLGGIDLNNSGSVVVREDKKLLTVLFP 95 (468)
Q Consensus 17 ~~v~k~G~L~~~k~g~~~k~WkkRwfVL~~-~~L~yyk~~~~~~~~~~~~~~~~l~~i~l~~~~~v~~~~~k~~~f~i~~ 95 (468)
..++++|||+ |+|...++|++|||||++ +.|+||+++.+..+.+ .+++..+.+..+........++++|.|..
T Consensus 6 ~~~~~~G~L~--K~g~~~k~WkkRwfvL~~~~~L~yy~~~~~~~~~g----~i~L~~~~~~~~~~~~~~~~~~~~F~I~~ 79 (125)
T 1unq_A 6 VAIVKEGWLH--KRGEYIKTWRPRYFLLKNDGTFIGYKERPQDVDQR----EAPLNNFSVAQCQLMKTERPRPNTFIIRC 79 (125)
T ss_dssp GCEEEEEEEE--EECSSSCCEEEEEEEEETTSEEEEESSCCCSHHHH----TSCSEEEECTTCEEEEECSSSTTEEEEEE
T ss_pred CCeeEEeeEE--eccCCccCccCcEEEEecCCEEEEEeCCCCCCCCc----eeEccceeEEeeeecccccCCCCEEEEEe
Confidence 5789999776 667678999999999995 6999999987644221 23455555554432223345678888863
Q ss_pred c-CCCCcEEEEEeCCHHHHHHHHHHHHHHHHhCC
Q 012222 96 D-GRDGRAFTLKAETSEDLYEWKTALELALAQAP 128 (468)
Q Consensus 96 ~-~~~~r~y~l~A~s~~e~~~Wi~aI~~ai~~~p 128 (468)
. ....++|+|+|+|++|+.+|+.+|+.++...+
T Consensus 80 ~~~~~~~~~~~~a~s~~e~~~Wi~al~~~~~~~~ 113 (125)
T 1unq_A 80 LQWTTVIERTFHVETPEEREEWTTAIQTVADGLK 113 (125)
T ss_dssp EETTEEEEEEEECSSHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCceeEEEEeCCHHHHHHHHHHHHHHHhhcc
Confidence 2 23468999999999999999999999997653
No 49
>2d9x_A Oxysterol binding protein-related protein 11; PH domain, OSBP-related protein 11, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.72 E-value=1.4e-17 Score=141.01 Aligned_cols=100 Identities=18% Similarity=0.303 Sum_probs=76.6
Q ss_pred CCceEEEeeeeeeecCCCcCCCeeEEEEEe--CCeEEEEecCCCCCCCCCCccccccccEEecCCcceeecCCCceeEEE
Q 012222 16 SNTVFKSGPLFISSKGIGWKSWKKRWFILT--RTSLVFFKNDPSALPQRGGEVNLTLGGIDLNNSGSVVVREDKKLLTVL 93 (468)
Q Consensus 16 ~~~v~k~G~L~~~k~g~~~k~WkkRwfVL~--~~~L~yyk~~~~~~~~~~~~~~~~l~~i~l~~~~~v~~~~~k~~~f~i 93 (468)
+..+.++|||+ |+|...++|++|||||+ ++.|+||+++.+... -+.+.|.|..+. |.....++++|.|
T Consensus 5 ~~~~~~~G~L~--K~~~~~~~Wk~R~fvL~~~~~~L~Yyk~~~~~~~-------~~~g~I~L~~~~-v~~~~~~~~~F~i 74 (120)
T 2d9x_A 5 SSGENVYGYLM--KYTNLVTGWQYRFFVLNNEAGLLEYFVNEQSRNQ-------KPRGTLQLAGAV-ISPSDEDSHTFTV 74 (120)
T ss_dssp CSCCCCEEEEE--EEEETTTEEEEEEEEECTTTCEEEEESSGGGSSS-------CCSEEEECTTCC-EECCSSSSSCEEE
T ss_pred CCCCcEEEEEE--ecCCCCCCceEEEEEEECCCCEEEEEecCcccCC-------CccceEEcceEE-EEecCCCCCEEEE
Confidence 45678999886 45556789999999998 579999998765311 145667777754 4444456678877
Q ss_pred EecCCCCcEEEEEeCCHHHHHHHHHHHHHHHHhC
Q 012222 94 FPDGRDGRAFTLKAETSEDLYEWKTALELALAQA 127 (468)
Q Consensus 94 ~~~~~~~r~y~l~A~s~~e~~~Wi~aI~~ai~~~ 127 (468)
.. +++|+|+|+|+|++|+++||.+|+.++...
T Consensus 75 ~~--~~~r~~~l~a~s~~e~~~Wi~al~~~~~~~ 106 (120)
T 2d9x_A 75 NA--ASGEQYKLRATDAKERQHWVSRLQICTQHH 106 (120)
T ss_dssp CC--SSSCCEEECCSSHHHHHHHHHHHHHHHHHH
T ss_pred Ec--CCCCEEEEECCCHHHHHHHHHHHHHHHHHh
Confidence 54 446899999999999999999999999754
No 50
>2coc_A FYVE, rhogef and PH domain containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.71 E-value=3.2e-17 Score=136.78 Aligned_cols=100 Identities=19% Similarity=0.242 Sum_probs=72.8
Q ss_pred CceEEEeeeeeeecCCCcCCCeeEEEEEeCC---eEEEEecCCCCCCCCCCccccccccEEecCCcceeecCCCceeEEE
Q 012222 17 NTVFKSGPLFISSKGIGWKSWKKRWFILTRT---SLVFFKNDPSALPQRGGEVNLTLGGIDLNNSGSVVVREDKKLLTVL 93 (468)
Q Consensus 17 ~~v~k~G~L~~~k~g~~~k~WkkRwfVL~~~---~L~yyk~~~~~~~~~~~~~~~~l~~i~l~~~~~v~~~~~k~~~f~i 93 (468)
..++++|||+++ +. .+.|+||||||+++ .|+||+++.+..|.+ .++|.++.+...... ...+++++|.|
T Consensus 6 ~~~~~~G~L~k~--~~-~~~WkkrWfVL~~~~~~~Ly~Yk~~~d~~p~g----~I~L~g~~V~~~~~~-~~~~~~~~Fki 77 (112)
T 2coc_A 6 SGSLLCGPLRLS--ES-GETWSEVWAAIPMSDPQVLHLQGGSQDGRLPR----TIPLPSCKLSVPDPE-ERLDSGHVWKL 77 (112)
T ss_dssp SSSSSEEEEEEE--SS-SSCEEEEEEECCTTCTTCEEEECCTTCSSSCS----EECGGGCEEECCCSS-SCCSSSEEEEE
T ss_pred CCceEEEEEEec--CC-CCCceEEEEEEECCCccEEEEECCCCccCcce----EEEcCCCEEEecCcc-cccCCCCEEEE
Confidence 345677988763 22 78999999999985 799999998876432 234555555432111 12346788888
Q ss_pred EecCCCCcEEEEEeCCHHHHHHHHHHHHHHHHhC
Q 012222 94 FPDGRDGRAFTLKAETSEDLYEWKTALELALAQA 127 (468)
Q Consensus 94 ~~~~~~~r~y~l~A~s~~e~~~Wi~aI~~ai~~~ 127 (468)
.. .+++|+|+|+|++++++||++|+.|+...
T Consensus 78 ~~---~~~~y~f~A~s~e~~~~Wl~al~~A~~~~ 108 (112)
T 2coc_A 78 QW---AKQSWYLSASSAELQQQWLETLSTAAHSG 108 (112)
T ss_dssp EE---TTEEEEEEESSHHHHHHHHHHHHHHHSCC
T ss_pred ec---CCeEEEEEcCCHHHHHHHHHHHHHHhcCC
Confidence 74 46899999999999999999999988643
No 51
>2y7b_A Actin-binding protein anillin; cell cycle; 1.90A {Homo sapiens}
Probab=99.71 E-value=1.4e-17 Score=143.50 Aligned_cols=101 Identities=22% Similarity=0.334 Sum_probs=75.4
Q ss_pred CceEEEeeeeeeecCCCcCCCeeEEEEEeCCeEEEEecCCC---CCCCCCCccccccccEEecCCcc--eeec----CCC
Q 012222 17 NTVFKSGPLFISSKGIGWKSWKKRWFILTRTSLVFFKNDPS---ALPQRGGEVNLTLGGIDLNNSGS--VVVR----EDK 87 (468)
Q Consensus 17 ~~v~k~G~L~~~k~g~~~k~WkkRwfVL~~~~L~yyk~~~~---~~~~~~~~~~~~l~~i~l~~~~~--v~~~----~~k 87 (468)
..++++|||+++..|+..++|++|||||+++.|+||+++.+ .. +.+.|+|..+.. |... ..+
T Consensus 3 ~~v~~~G~L~K~~~~~~~~~WkrRwfvL~~~~L~yyk~~~d~~~~~---------p~g~I~L~~~~~~~v~~~~~~~~~~ 73 (134)
T 2y7b_A 3 SSVEERGFLTIFEDVSGFGAWHRRWCVLSGNCISYWTYPDDEKRKN---------PIGRINLANCTSRQIEPANREFCAR 73 (134)
T ss_dssp CCCCEEEEEEEEEEETTEEEEEEEEEEEETTEEEEESSHHHHTTSC---------CSEEEEGGGBCSSSCEECCTTTCCC
T ss_pred CCceEEeeEEEEcCCCCCCCcEEEEEEEECCEEEEECCCCcccccC---------ceEEEEhhhCccccccccchhhccC
Confidence 46899998886644666889999999999999999996433 33 456677776542 4332 246
Q ss_pred ceeEEEEecCCC-----------------CcEEEEEeCCHHHHHHHHHHHHHHHHh
Q 012222 88 KLLTVLFPDGRD-----------------GRAFTLKAETSEDLYEWKTALELALAQ 126 (468)
Q Consensus 88 ~~~f~i~~~~~~-----------------~r~y~l~A~s~~e~~~Wi~aI~~ai~~ 126 (468)
+++|.|....+. .++|+|+|+|++|+.+||.+|+.++..
T Consensus 74 ~~~F~i~~~~p~~~~~~~~~~~~~~~~~~~r~~~l~A~s~~e~~~Wi~al~~~i~~ 129 (134)
T 2y7b_A 74 RNTFELITVRPQREDDRETLVSQCRDTLCVTKNWLSADTKEERDLWMQKLNQVLVD 129 (134)
T ss_dssp TTEEEEEEEEECCTTCCCCSSEEEETTEEEEEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEecCCCcccccccccccccCCCceEEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 678888642111 158999999999999999999999864
No 52
>1upq_A PEPP1; PH domain, phosphoinositide binding, signal transduction; 1.48A {Homo sapiens} SCOP: b.55.1.1 PDB: 1upr_A*
Probab=99.71 E-value=1e-16 Score=135.89 Aligned_cols=99 Identities=26% Similarity=0.409 Sum_probs=72.3
Q ss_pred CCceEEEeeeeeeecCCCcCCCeeEEEEEeCCeEEEEecCCCCCCCCCCccccccccEEecCCccee----ecCCCceeE
Q 012222 16 SNTVFKSGPLFISSKGIGWKSWKKRWFILTRTSLVFFKNDPSALPQRGGEVNLTLGGIDLNNSGSVV----VREDKKLLT 91 (468)
Q Consensus 16 ~~~v~k~G~L~~~k~g~~~k~WkkRwfVL~~~~L~yyk~~~~~~~~~~~~~~~~l~~i~l~~~~~v~----~~~~k~~~f 91 (468)
...++++|||+++.. ...+.|++|||||+++.|+||+++.+..| .+.|.|..+.... ....+.++|
T Consensus 8 ~~~~~~~G~L~K~~~-~~~~~WkkR~fvL~~~~L~yy~~~~~~~~---------~g~i~l~~~~v~~~~~~~~~~~~~~f 77 (123)
T 1upq_A 8 NLPVHIRGWLHKQDS-SGLRLWKRRWFVLSGHCLFYYKDSREESV---------LGSVLLPSYNIRPDGPGAPRGRRFTF 77 (123)
T ss_dssp TSCEEEEEEEEEECS-SSSCCEEEEEEEEETTEEEEESSTTCCSC---------CEEEEGGGCEEEECCSSCTTSSSSEE
T ss_pred CCCceEEEEEEeeCC-CCCCCceeEEEEEeCCEEEEECCCCCccc---------ceEEECCCCEEEECCCCccCCCcEEE
Confidence 346899998874432 25789999999999999999999887653 3344444332111 112356777
Q ss_pred EEEecCCCCcEEEEEeCCHHHHHHHHHHHHHHHHh
Q 012222 92 VLFPDGRDGRAFTLKAETSEDLYEWKTALELALAQ 126 (468)
Q Consensus 92 ~i~~~~~~~r~y~l~A~s~~e~~~Wi~aI~~ai~~ 126 (468)
.+.. +++++|+|+|+|++|+.+|+.+|+.++..
T Consensus 78 ~i~~--~~~r~~~l~a~s~~e~~~Wi~al~~a~~~ 110 (123)
T 1upq_A 78 TAEH--PGMRTYVLAADTLEDLRGWLRALGRASRA 110 (123)
T ss_dssp EEEC--TTSCCEEEECSSHHHHHHHHHHHHHHHC-
T ss_pred EEEC--CCCeEEEEECCCHHHHHHHHHHHHHHHhc
Confidence 7753 45689999999999999999999999863
No 53
>1wg7_A Dedicator of cytokinesis protein 9; pleckstrin homology domain, zizimin1, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.71 E-value=4e-17 Score=143.63 Aligned_cols=102 Identities=25% Similarity=0.384 Sum_probs=77.8
Q ss_pred CCceEEEeeeeeeecC----CCcCCCeeEEEEEeCC-----eEEEEecCC-CCCCCCCCccccccccEEecCCcceeec-
Q 012222 16 SNTVFKSGPLFISSKG----IGWKSWKKRWFILTRT-----SLVFFKNDP-SALPQRGGEVNLTLGGIDLNNSGSVVVR- 84 (468)
Q Consensus 16 ~~~v~k~G~L~~~k~g----~~~k~WkkRwfVL~~~-----~L~yyk~~~-~~~~~~~~~~~~~l~~i~l~~~~~v~~~- 84 (468)
...++++|||+++..+ ...+.|++|||||+++ .|.||+++. +.. +.+.|.|..+..+...
T Consensus 15 ~~~~~~~G~L~K~~~~~~~~~~~k~Wk~RwfvL~~~~~g~~~L~yy~~~~~~~~---------~~g~I~L~~~~~~~~~~ 85 (150)
T 1wg7_A 15 KGGITKHGWLYKGNMNSAISVTMRSFKRRFFHLIQLGDGSYNLNFYKDEKISKE---------PKGSIFLDSCMGVVQNN 85 (150)
T ss_dssp SCCCCCEEEEEECCCCSSHHHHHSSCEEEEEEEEECSSSCEEEEEESSSCCSSC---------CSEEECTTTCCEECCCC
T ss_pred CCCeeEEEEEEEecCCccccccccCeeEEEEEEecCCCCceEEEEECCCCCCCC---------cCcEEecccCEEEecCC
Confidence 4578999988754322 3468999999999987 999999987 444 4456777766544322
Q ss_pred CCCceeEEEEecCCCCcEEEEEeCCHHHHHHHHHHHHHHHHhCC
Q 012222 85 EDKKLLTVLFPDGRDGRAFTLKAETSEDLYEWKTALELALAQAP 128 (468)
Q Consensus 85 ~~k~~~f~i~~~~~~~r~y~l~A~s~~e~~~Wi~aI~~ai~~~p 128 (468)
..++++|.|.. ++.++|+|+|++++|+.+|+.+|+.++....
T Consensus 86 ~~~~~~F~i~~--~~~r~~~l~A~s~~e~~~Wi~al~~ai~~~~ 127 (150)
T 1wg7_A 86 KVRRFAFELKM--QDKSSYLLAADSEVEMEEWITILNKILQLNF 127 (150)
T ss_dssp SSCTTEEEEEC--SSSCEEEEECSSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCceEEEEEe--CCCcEEEEEeCCHHHHHHHHHHHHHHHHhhh
Confidence 35667888765 3458999999999999999999999997543
No 54
>3aj4_A Pleckstrin homology domain-containing family B ME; antiparallel beta sheet, protein transport; HET: SEP EDO; 1.00A {Homo sapiens} PDB: 3via_A 2dhi_A
Probab=99.70 E-value=4.2e-17 Score=136.11 Aligned_cols=103 Identities=24% Similarity=0.465 Sum_probs=74.5
Q ss_pred CceEEEeeeeeeecCCCcCCCeeEEEEE-eCCeEEEEecCCCCCCCCCCccccccccEEecCCccee---ecCCC--cee
Q 012222 17 NTVFKSGPLFISSKGIGWKSWKKRWFIL-TRTSLVFFKNDPSALPQRGGEVNLTLGGIDLNNSGSVV---VREDK--KLL 90 (468)
Q Consensus 17 ~~v~k~G~L~~~k~g~~~k~WkkRwfVL-~~~~L~yyk~~~~~~~~~~~~~~~~l~~i~l~~~~~v~---~~~~k--~~~ 90 (468)
..++++|||+ |+|...++|++||||| +++.|+||+++.+..+. +.+.+....|.+.....+. ....+ +++
T Consensus 3 ~~~~~~G~L~--K~g~~~k~WkkR~fvL~~~~~L~yyk~~~~~~~~--g~i~l~~~~i~l~~~~~v~~v~~~~~~~~~~~ 78 (112)
T 3aj4_A 3 MAFVKSGWLL--RQSTILKRWKKNWFDLWSDGHLIYYDDQTRQNIE--DKVHMPMDCINIRTGQECRDTQPPDGKSKDCM 78 (112)
T ss_dssp CSCSEEEEEE--EECSSSCCEEEEEEEECTTSEEEEESSTTCCSEE--EEEEHHHHEEEEEEGGGCCSCCCSTTCCGGGE
T ss_pred cceeEEEEEE--eeCCCCCCeeceEEEEeeCCEEEEEcCCCCCCCC--ccccccccceeecccccccccCCCCCCCcCcE
Confidence 4678999776 5666789999999999 89999999998775532 2333333445554322221 22222 468
Q ss_pred EEEEecCCCCcEEEEEeCCHHHHHHHHHHHHHHHH
Q 012222 91 TVLFPDGRDGRAFTLKAETSEDLYEWKTALELALA 125 (468)
Q Consensus 91 f~i~~~~~~~r~y~l~A~s~~e~~~Wi~aI~~ai~ 125 (468)
|.|.. +++++|+|+|+|++|+.+|+.+|+.|..
T Consensus 79 F~i~~--~~~r~~~l~a~s~~e~~~Wi~al~~a~~ 111 (112)
T 3aj4_A 79 LQIVC--RDGKTISLCAESTDDCLAWKFTLQDSRT 111 (112)
T ss_dssp EEEEE--TTSCEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred EEEEe--cCCcEEEEEeCCHHHHHHHHHHHHHHhh
Confidence 88864 4579999999999999999999999864
No 55
>1wjm_A Beta-spectrin III; PH domain, signal transduction, structural genomics, spectrin beta chain, brain 2, KIAA0302; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.70 E-value=3.5e-17 Score=139.11 Aligned_cols=107 Identities=25% Similarity=0.409 Sum_probs=74.2
Q ss_pred CCceEEEeeeeeeec----C--CCcCCCeeEEEEEeCCeEEEEecCCCCCCCC--CCccccccccEEecCCcceee--cC
Q 012222 16 SNTVFKSGPLFISSK----G--IGWKSWKKRWFILTRTSLVFFKNDPSALPQR--GGEVNLTLGGIDLNNSGSVVV--RE 85 (468)
Q Consensus 16 ~~~v~k~G~L~~~k~----g--~~~k~WkkRwfVL~~~~L~yyk~~~~~~~~~--~~~~~~~l~~i~l~~~~~v~~--~~ 85 (468)
...+.++|||+++.. | ...+.|++|||||+++.|+||+++.+..+.. .+. ..|++..+..... ..
T Consensus 5 ~~~v~~eG~L~kk~~~~~~gk~~~~~~Wk~rwfvL~~~~L~yyk~~~~~~~~~~~~~~-----~~i~l~~~~~~~~~~~~ 79 (123)
T 1wjm_A 5 SSGEQMEGMLCRKQEMEAFGKKAANRSWQNVYCVLRRGSLGFYKDAKAASAGVPYHGE-----VPVSLARAQGSVAFDYR 79 (123)
T ss_dssp CCCCCEEEEEEEEEEEEETTEECSCCCCEEEEEEEETTEEEEESSHHHHTTTCBSSSC-----CCEECTTCEEEECTTCS
T ss_pred CCCeEEEEEEEEEEEEeCCCccCCCCCccEEEEEEECCEEEEEEcccccccCcccCCC-----ceEEccCcEEeeccccc
Confidence 346899998875432 1 1278999999999999999999986643210 111 1234433221111 13
Q ss_pred CCceeEEEEecCCCCcEEEEEeCCHHHHHHHHHHHHHHHHhCCc
Q 012222 86 DKKLLTVLFPDGRDGRAFTLKAETSEDLYEWKTALELALAQAPS 129 (468)
Q Consensus 86 ~k~~~f~i~~~~~~~r~y~l~A~s~~e~~~Wi~aI~~ai~~~p~ 129 (468)
.++++|.|.. +++++|+|+|+|++|+++||.+|+.++...|+
T Consensus 80 ~r~~~F~i~~--~~~~~~~f~A~s~~e~~~Wi~ai~~~~~~~~~ 121 (123)
T 1wjm_A 80 KRKHVFKLGL--QDGKEYLFQAKDEAEMSSWLRVVNAAIASGPS 121 (123)
T ss_dssp SCSSEEEEEC--SSSCEEEEECSSHHHHHHHHHHHHHHHHHCCC
T ss_pred CCCCEEEEEE--cCCcEEEEECCCHHHHHHHHHHHHHHHhccCC
Confidence 4567887764 45789999999999999999999999987654
No 56
>1u5f_A SRC-associated adaptor protein; PH domain of SKAP-HOM, artefactual dimerization induced by V derived sequence, signaling protein; 1.90A {Mus musculus} SCOP: b.55.1.1 PDB: 1u5g_A
Probab=99.70 E-value=1.1e-16 Score=140.49 Aligned_cols=100 Identities=22% Similarity=0.349 Sum_probs=74.5
Q ss_pred CceEEEeeeeeeecCC--CcCCCeeEEEEEeCCeEEEEecCCCCCCCCCCccccccccEEecCCcceee-----cCCCce
Q 012222 17 NTVFKSGPLFISSKGI--GWKSWKKRWFILTRTSLVFFKNDPSALPQRGGEVNLTLGGIDLNNSGSVVV-----REDKKL 89 (468)
Q Consensus 17 ~~v~k~G~L~~~k~g~--~~k~WkkRwfVL~~~~L~yyk~~~~~~~~~~~~~~~~l~~i~l~~~~~v~~-----~~~k~~ 89 (468)
..++++|||+++..+. ..+.|++|||||+++.|+||+++.+.. +.+.|.|..+..+.. ...+.+
T Consensus 15 ~~~~~~G~L~K~g~~~~~~~k~WkkR~fvL~~~~L~yyk~~~~~~---------~~g~i~L~~~~v~~~~~~~~~~~~~~ 85 (148)
T 1u5f_A 15 PFVIKAGYLEKRRKDHSFLGFEWQKRWCALSKTVFYYYGSDKDKQ---------QKGEFAIDGYDVRMNNTLRKDGKKDC 85 (148)
T ss_dssp SSEEEEEEEEEECCCSSCSSCSEEEEEEEEETTEEEEESSTTCSS---------CSEEEECTTCEEEECTTSCSSTTGGG
T ss_pred CCccEEEEEEEeCCCCCCcCCCceeEEEEEECCEEEEEcCCCCcc---------cceEEEcCCcEEEECCCcccCCCCcc
Confidence 5789999887554321 357999999999999999999987755 344566665543211 223447
Q ss_pred eEEEEecCCCCcEEEEEeCCHHHHHHHHHHHHHHHHhC
Q 012222 90 LTVLFPDGRDGRAFTLKAETSEDLYEWKTALELALAQA 127 (468)
Q Consensus 90 ~f~i~~~~~~~r~y~l~A~s~~e~~~Wi~aI~~ai~~~ 127 (468)
+|.|.. +++|+|+|+|+|.+|+.+|+.+|+.++...
T Consensus 86 ~F~I~~--~~~r~~~l~a~s~~e~~~Wi~al~~~i~~~ 121 (148)
T 1u5f_A 86 CFEICA--PDKRIYQFTAASPKDAEEWVQQLKFILQDL 121 (148)
T ss_dssp EEEEEC--TTSCEEEEECSSHHHHHHHHHHHHHHCC--
T ss_pred EEEEEC--CCCcEEEEECCCHHHHHHHHHHHHHHHHHh
Confidence 888764 446899999999999999999999998643
No 57
>3rcp_A Pleckstrin homology domain-containing family A ME; FAPP1, PH domain, lipid-binding, membrane, membrane protein; 1.90A {Homo sapiens} PDB: 2kcj_A
Probab=99.70 E-value=5.3e-17 Score=133.33 Aligned_cols=95 Identities=20% Similarity=0.352 Sum_probs=70.1
Q ss_pred EEeeeeeeecCCCcCCCeeEEEEEeCCeEEEEecCCCCCCCCCCccccccccEEecCCcceeecCCCceeEEEEecCCCC
Q 012222 21 KSGPLFISSKGIGWKSWKKRWFILTRTSLVFFKNDPSALPQRGGEVNLTLGGIDLNNSGSVVVREDKKLLTVLFPDGRDG 100 (468)
Q Consensus 21 k~G~L~~~k~g~~~k~WkkRwfVL~~~~L~yyk~~~~~~~~~~~~~~~~l~~i~l~~~~~v~~~~~k~~~f~i~~~~~~~ 100 (468)
++|||+ |+|+..++|++|||||+++.|+||+++.+.... +.+.|.|..+. +.....+.++|.|.. +++
T Consensus 1 ~eG~L~--K~g~~~k~Wk~R~fvL~~~~L~Yy~~~~~~~~~-------~~g~i~L~~~~-v~~~~~~~~~F~i~~--~~~ 68 (103)
T 3rcp_A 1 MEGVLY--KWTNYLTGWQPRWFVLDNGILSYYDSQDDVCKG-------SKGSIKMAVCE-IKVHSADNTRMELII--PGE 68 (103)
T ss_dssp CEEEEE--EECCTTTCEEEEEEEEETTEEEEESSCC---CC-------CSCEEEGGGCE-EECCTTCSSEEEEEE--TTT
T ss_pred CceEEE--EccCCCCCeeceEEEEECCEEEEEecCCcccCC-------cccEEEeeeeE-EEEcCCCCceEEEEe--CCC
Confidence 489775 667778999999999999999999998763211 24456665432 322334566777764 457
Q ss_pred cEEEEEeCCHHHHHHHHHHHHHHHHhC
Q 012222 101 RAFTLKAETSEDLYEWKTALELALAQA 127 (468)
Q Consensus 101 r~y~l~A~s~~e~~~Wi~aI~~ai~~~ 127 (468)
++|+|+|+|++|+++|+.+|+.|+...
T Consensus 69 r~~~l~a~s~~e~~~Wi~al~~a~~~~ 95 (103)
T 3rcp_A 69 QHFYMKAVNAAERQRWLVALGSSKASL 95 (103)
T ss_dssp EEEEEECSSHHHHHHHHHHHHTTSCCC
T ss_pred CEEEEECCCHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999988654
No 58
>2rlo_A Centaurin-gamma 1; split PH domain, alternative splicing, ANK repeat, cytoplasm, GTP-binding, GTPase activation, metal-binding, nucleotide-binding; NMR {Homo sapiens}
Probab=99.69 E-value=8.6e-17 Score=137.76 Aligned_cols=106 Identities=19% Similarity=0.245 Sum_probs=67.8
Q ss_pred ceEEEeeeeeeecC-CCcCCCeeEEEEEeC-CeEEEEecCCCCCC-CCCC-------ccccccccEEecCCcce------
Q 012222 18 TVFKSGPLFISSKG-IGWKSWKKRWFILTR-TSLVFFKNDPSALP-QRGG-------EVNLTLGGIDLNNSGSV------ 81 (468)
Q Consensus 18 ~v~k~G~L~~~k~g-~~~k~WkkRwfVL~~-~~L~yyk~~~~~~~-~~~~-------~~~~~l~~i~l~~~~~v------ 81 (468)
.++|+|||+++. | ...++|++|||||++ +.|+||++..+... ..+. ....+.+.|.+..+...
T Consensus 3 ~~~k~G~L~K~~-g~~~~k~WkkRwFvL~~~~~l~Y~~~~~d~~~~~~~~~i~l~~~~~~~~~~~i~l~~~~~~~~~~~~ 81 (128)
T 2rlo_A 3 IPIKQSFLLKRS-GNSLNKEWKKKYVTLSSNGFLLYHPSINDYIHSTHGKEMDLLRTTVKVPGKRPPRAISAFGPSASGS 81 (128)
T ss_dssp CEEEEEEEEEEC-SCSTTCCEEEEEEEEETTTEEEEESSHHHHHHTCSCEEEESSSCEEECSSCCCCCSSCCCSCCSCCC
T ss_pred cceeEEEEEEec-CCCccCCccEEEEEEeCCCEEEEecchhhhccccCCCeeeeeeeEEecCCCcccccccccccccccc
Confidence 578999887442 3 257999999999996 67888875222000 0011 11112223333332211
Q ss_pred ee-cCCCceeEEEEecCCCCcEEEEEeCCHHHHHHHHHHHHHHHHh
Q 012222 82 VV-REDKKLLTVLFPDGRDGRAFTLKAETSEDLYEWKTALELALAQ 126 (468)
Q Consensus 82 ~~-~~~k~~~f~i~~~~~~~r~y~l~A~s~~e~~~Wi~aI~~ai~~ 126 (468)
.. .+.++++|.|.. +++++|+|+|+|++|+++||.||+.+|..
T Consensus 82 ~~~~~~~~~~F~I~t--~~~r~~~l~A~s~~e~~~Wi~ai~~~i~~ 125 (128)
T 2rlo_A 82 AGQAEEENFEFLIVS--STGQTWHFEAASFEERDAWVQAIESQILA 125 (128)
T ss_dssp CSSCCCCCCCEEEEC--TTSCEEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred ccccccCCceEEEEc--CCCCEEEEEcCCHHHHHHHHHHHHHHHHH
Confidence 00 125667888764 45699999999999999999999999974
No 59
>2d9y_A Pleckstrin homology domain-containing protein family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.69 E-value=1e-16 Score=134.65 Aligned_cols=98 Identities=28% Similarity=0.419 Sum_probs=73.5
Q ss_pred CCceEEEeeeeeeecCCCcCCCeeEEEEEeCCeEEEEecCCCCCCCCCCccccccccEEecCCccee--e--cCCCceeE
Q 012222 16 SNTVFKSGPLFISSKGIGWKSWKKRWFILTRTSLVFFKNDPSALPQRGGEVNLTLGGIDLNNSGSVV--V--REDKKLLT 91 (468)
Q Consensus 16 ~~~v~k~G~L~~~k~g~~~k~WkkRwfVL~~~~L~yyk~~~~~~~~~~~~~~~~l~~i~l~~~~~v~--~--~~~k~~~f 91 (468)
...++++|||+++.. ...+.|++|||||+++.|+||+++.+..| .+.|.|..+.... . ...++++|
T Consensus 8 ~~~~~~~G~L~K~~~-~~~~~Wk~R~fvL~~~~L~yy~~~~~~~~---------~g~i~L~~~~v~~~~~~~~~~~~~~F 77 (117)
T 2d9y_A 8 NAPVTKAGWLFKQAS-SGVKQWNKRWFVLVDRCLFYYKDEKEESI---------LGSIPLLSFRVAAVQPSDNISRKHTF 77 (117)
T ss_dssp SCCCCEEEEEEEECT-TSSSCEEEEEEEEETTEEEEESSTTCCSC---------CEEEECSSCEEEECCTTTTCCCSSEE
T ss_pred CCCeeEEEEEEEeCC-CCCCCceEEEEEECCCEEEEECCCCCCCc---------CCEEEeCCeEEEEcCccccCCCccEE
Confidence 457899998874432 35789999999999999999999877653 3455555543111 1 13455788
Q ss_pred EEEecCCCCcEEEEEeCCHHHHHHHHHHHHHHHH
Q 012222 92 VLFPDGRDGRAFTLKAETSEDLYEWKTALELALA 125 (468)
Q Consensus 92 ~i~~~~~~~r~y~l~A~s~~e~~~Wi~aI~~ai~ 125 (468)
.|.. +++++|+|+|+|++|+.+|+.+|+.++.
T Consensus 78 ~i~~--~~~r~~~l~a~s~~e~~~Wi~al~~~~~ 109 (117)
T 2d9y_A 78 KAEH--AGVRTYFFSAESPEEQEAWIQAMGEAAR 109 (117)
T ss_dssp EEEC--SSSCEEEEECSSHHHHHHHHHHHHHTTC
T ss_pred EEEc--CCCcEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 7753 4568999999999999999999999885
No 60
>3pp2_A RHO GTPase-activating protein 27; PH domain, GTPase activator, pleckstrin homology domain, STR genomics consortium, SGC, hydrolase activator; HET: CIT; 1.42A {Homo sapiens}
Probab=99.68 E-value=1.2e-16 Score=136.26 Aligned_cols=108 Identities=19% Similarity=0.356 Sum_probs=72.4
Q ss_pred CCceEEEeeeeeeec---CC--CcCCCeeEEEEEeCCeEEEEecCCCCCCCCCC---ccccccccEEecCCcceee---c
Q 012222 16 SNTVFKSGPLFISSK---GI--GWKSWKKRWFILTRTSLVFFKNDPSALPQRGG---EVNLTLGGIDLNNSGSVVV---R 84 (468)
Q Consensus 16 ~~~v~k~G~L~~~k~---g~--~~k~WkkRwfVL~~~~L~yyk~~~~~~~~~~~---~~~~~l~~i~l~~~~~v~~---~ 84 (468)
...+.|+|||++++- |. ..++|++|||||+++.|+|||+++...+.+.. ....+.+.|+|..+..... .
T Consensus 5 ~~~v~keG~L~rK~~~~~gkk~~~r~W~~~w~VL~~~~L~~yKd~~~~~~~~~~~~~~~~~~~~~i~L~~a~v~~~~~d~ 84 (124)
T 3pp2_A 5 TKTLDKAGVLHRTKTADKGKRLRKKHWSASWTVLEGGVLTFFKDSKTSAAGGLRQPSKFSTPEYTVELRGATLSWAPKDK 84 (124)
T ss_dssp ----CEEEEEEEEEEEETTEECSSCCCEEEEEEEETTEEEEESCSBCC---CBCCGGGGCSEEEEEECTTCEEEECCGGG
T ss_pred CCcEEEEEEEEEEEeccCCccCCCCCceEEEEEEECCEEEEEecCccccccCccCcccccCCcceEEcCCCEEEeccccc
Confidence 347899999986521 22 24699999999999999999998765421100 0012445666665432222 2
Q ss_pred CCCceeEEEEecCCCCcEEEEEeCCHHHHHHHHHHHHHHHH
Q 012222 85 EDKKLLTVLFPDGRDGRAFTLKAETSEDLYEWKTALELALA 125 (468)
Q Consensus 85 ~~k~~~f~i~~~~~~~r~y~l~A~s~~e~~~Wi~aI~~ai~ 125 (468)
..++++|.+. .+++++|+|||++++||.+|+.+|+.||+
T Consensus 85 ~krk~vF~l~--t~~~~~ylfqA~s~~e~~~Wi~aI~~aI~ 123 (124)
T 3pp2_A 85 SSRKNVLELR--SRDGSEYLIQHDSEAIISTWHKAIAQGIQ 123 (124)
T ss_dssp CSSSSEEEEE--CTTSCEEEEECSCHHHHHHHHHHHHHHHC
T ss_pred CCCceEEEEE--CCCCCEEEEECCCHHHHHHHHHHHHHHHh
Confidence 3355677765 35688999999999999999999999985
No 61
>1dro_A Beta-spectrin; cytoskeleton; NMR {Drosophila melanogaster} SCOP: b.55.1.1
Probab=99.68 E-value=4.4e-17 Score=138.38 Aligned_cols=108 Identities=17% Similarity=0.233 Sum_probs=75.0
Q ss_pred CCceEEEeeeeeeec----C--CCcCCCeeEEEEEeCCeEEEEecCCCCCCCCCCccccccccEEecCCcceeec--CCC
Q 012222 16 SNTVFKSGPLFISSK----G--IGWKSWKKRWFILTRTSLVFFKNDPSALPQRGGEVNLTLGGIDLNNSGSVVVR--EDK 87 (468)
Q Consensus 16 ~~~v~k~G~L~~~k~----g--~~~k~WkkRwfVL~~~~L~yyk~~~~~~~~~~~~~~~~l~~i~l~~~~~v~~~--~~k 87 (468)
+..+.|+|||+++.. | ...++|++|||||+++.|+|||++.+..+.++..+. ..+.|+|..+...... ..+
T Consensus 5 ~~~v~k~G~L~rK~~~~~~gkk~~~~~Wk~rw~vL~~~~L~~yk~~~~~~~~~~~~~~-~~~~i~L~~~~v~~~~d~~kr 83 (122)
T 1dro_A 5 GAGEGHEGYVTRKHEWDSTTKKASNRSWDKVYMAAKAGRISFYKDQKGYKSNPELTFR-GEPSYDLQNAAIEIASDYTKK 83 (122)
T ss_dssp CSSSSEEEEEEEECSCCCCCCTTCCCCCEEEEEEESSSCCBEESSSSHHHHCTTCCSS-CCCBCCCSSCCCEECCSSSSS
T ss_pred CCceEEEEEEEEEEEEeCCCccCCCCCccEEEEEEECCEEEEEeCCcccccCCCcccC-CCceEECCCCEEEeCCCCCCC
Confidence 346789999975432 1 147899999999999999999998765432211110 1134555443221111 245
Q ss_pred ceeEEEEecCCCCcEEEEEeCCHHHHHHHHHHHHHHHHh
Q 012222 88 KLLTVLFPDGRDGRAFTLKAETSEDLYEWKTALELALAQ 126 (468)
Q Consensus 88 ~~~f~i~~~~~~~r~y~l~A~s~~e~~~Wi~aI~~ai~~ 126 (468)
+++|.+.+ .++++|+|+|+|++|+++||.+|+.+|..
T Consensus 84 ~~~F~l~t--~~~~~~lfqA~s~~e~~~Wi~ai~~~i~~ 120 (122)
T 1dro_A 84 KHVLRVKL--ANGALFLLQAHDDTEMSQWVTSLKAQSDS 120 (122)
T ss_dssp TTEEEEEC--SSSCEEEEECSSSHHHHHHHHHHHHHHTC
T ss_pred CeEEEEEE--cCCCEEEEECCCHHHHHHHHHHHHHHHHh
Confidence 67777763 46799999999999999999999999975
No 62
>1u5e_A SRC-associated adaptor protein; novel dimerization domain, PH domain, signaling protein; 2.60A {Mus musculus} SCOP: b.55.1.1 PDB: 2otx_A
Probab=99.68 E-value=1.5e-16 Score=148.01 Aligned_cols=99 Identities=22% Similarity=0.357 Sum_probs=77.2
Q ss_pred CceEEEeeeeeeecCC--CcCCCeeEEEEEeCCeEEEEecCCCCCCCCCCccccccccEEecCCcceee-----cCCCce
Q 012222 17 NTVFKSGPLFISSKGI--GWKSWKKRWFILTRTSLVFFKNDPSALPQRGGEVNLTLGGIDLNNSGSVVV-----REDKKL 89 (468)
Q Consensus 17 ~~v~k~G~L~~~k~g~--~~k~WkkRwfVL~~~~L~yyk~~~~~~~~~~~~~~~~l~~i~l~~~~~v~~-----~~~k~~ 89 (468)
..++++|||+++..+. ..+.|++|||||+++.|+||+++.+.. +.+.|.|..+..+.. ...+.+
T Consensus 104 ~~v~k~G~L~Kkg~~~~~~~k~WkkRwfVL~~~~L~Yyk~~~~~~---------p~g~I~L~~~~~v~~~~~~~~~~k~~ 174 (211)
T 1u5e_A 104 PFVIKAGYLEKRRKDHSFLGFEWQKRWCALSKTVFYYYGSDKDKQ---------QKGEFAIDGYDVRMNNTLRKDGKKDC 174 (211)
T ss_dssp SSEEEEEEEEEEEHHHHTTTCCCEEEEEEEETTEEEEESSTTCSS---------CSEEEECTTCEEEECGGGCSSTTGGG
T ss_pred CCccEEEEEEEECCCCCcCCCCcEeEEEEEECCEEEEEcCCCCcc---------ceEEEEeCCcEEEEcCCccccCCCCC
Confidence 3689999888655421 368999999999999999999988755 345677766655442 223457
Q ss_pred eEEEEecCCCCcEEEEEeCCHHHHHHHHHHHHHHHHh
Q 012222 90 LTVLFPDGRDGRAFTLKAETSEDLYEWKTALELALAQ 126 (468)
Q Consensus 90 ~f~i~~~~~~~r~y~l~A~s~~e~~~Wi~aI~~ai~~ 126 (468)
+|.|.. +++|+|+|+|+|.+|+.+||.+|+.+|..
T Consensus 175 ~F~I~t--~~~r~~~l~A~s~~e~~~Wi~aL~~ai~~ 209 (211)
T 1u5e_A 175 CFEICA--PDKRIYQFTAASPKDAEEWVQQLKFILQD 209 (211)
T ss_dssp EEEEEC--SSSCEEEEECSSHHHHHHHHHHHHHHHHT
T ss_pred EEEEEc--CCCCEEEEEcCCHHHHHHHHHHHHHHHHH
Confidence 888865 44699999999999999999999999974
No 63
>2cof_A Protein KIAA1914; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.68 E-value=5.9e-17 Score=134.23 Aligned_cols=98 Identities=19% Similarity=0.251 Sum_probs=70.3
Q ss_pred CCceEEEeeeeeeecCCCcCCCeeEEEEEeCCeEEEEecCCCCCCCCCCccccccccEEecCCcceeecCCCceeEEEEe
Q 012222 16 SNTVFKSGPLFISSKGIGWKSWKKRWFILTRTSLVFFKNDPSALPQRGGEVNLTLGGIDLNNSGSVVVREDKKLLTVLFP 95 (468)
Q Consensus 16 ~~~v~k~G~L~~~k~g~~~k~WkkRwfVL~~~~L~yyk~~~~~~~~~~~~~~~~l~~i~l~~~~~v~~~~~k~~~f~i~~ 95 (468)
...+.++|||+++ ..+.|++|||||+++.|+||+++.+ .+ .+...+.+.++.+.. .....++++|.|..
T Consensus 5 ~~~~~~~G~L~K~----~~k~Wk~RwfvL~~~~L~yyk~~~~-~~--~~~~~i~l~~~~v~~----~~~~~~~~~F~i~~ 73 (107)
T 2cof_A 5 SSGLETSSYLNVL----VNSQWKSRWCSVRDNHLHFYQDRNR-SK--VAQQPLSLVGCEVVP----DPSPDHLYSFRILH 73 (107)
T ss_dssp CCCCTTCCEEEEE----ETTEEEEEEEEECSSCEEEECSSTT-CS--EEEEEECTTTCEEEC----CCBTTBSCEEEEEE
T ss_pred CCCCcEeEEEEEe----cCCCcceEEEEEECCEEEEEeCCcc-cC--CCeeEEeccceEEEE----CCCCCCCeEEEEEe
Confidence 3467899988755 4689999999999999999999865 21 122222232322221 12234567888865
Q ss_pred cCCCCcEEEEEeCCHHHHHHHHHHHHHHHHh
Q 012222 96 DGRDGRAFTLKAETSEDLYEWKTALELALAQ 126 (468)
Q Consensus 96 ~~~~~r~y~l~A~s~~e~~~Wi~aI~~ai~~ 126 (468)
++.|+|+|+|+|++|+.+||.+|+.++..
T Consensus 74 --~~~r~~~l~A~s~~e~~~Wi~al~~~~~~ 102 (107)
T 2cof_A 74 --KGEELAKLEAKSSEEMGHWLGLLLSESGS 102 (107)
T ss_dssp --TTEEEEEEECSSHHHHHHHHHHHHHHSSC
T ss_pred --CCCeEEEEEcCCHHHHHHHHHHHHHHHcC
Confidence 34789999999999999999999998753
No 64
>2j59_M RHO-GTPase activating protein 10; ARF, ARF1, ARFBD, arhgap21, myristate, transport, nucleotide-binding, rhogap protein, hydrolase; HET: GTP; 2.1A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dhj_A
Probab=99.67 E-value=1.4e-16 Score=142.98 Aligned_cols=100 Identities=16% Similarity=0.272 Sum_probs=64.9
Q ss_pred ceEEEeeeeee--------ecCCCcCCCeeEEEEEeCCeEEEEecCCCCCCCCCCccccccccEEecCCcc---eee-cC
Q 012222 18 TVFKSGPLFIS--------SKGIGWKSWKKRWFILTRTSLVFFKNDPSALPQRGGEVNLTLGGIDLNNSGS---VVV-RE 85 (468)
Q Consensus 18 ~v~k~G~L~~~--------k~g~~~k~WkkRwfVL~~~~L~yyk~~~~~~~~~~~~~~~~l~~i~l~~~~~---v~~-~~ 85 (468)
.+.++|||+++ |+|...+.|++|||||+++.|+||+++.+.... ..+.|.|..... +.. ..
T Consensus 2 dv~~eG~L~~k~~~~~~gkK~g~~~k~WkkRwfvL~~~~L~yyk~~~~~~~~-------~~g~i~l~~~~~~~~~~~~~~ 74 (168)
T 2j59_M 2 DAAKEGWLHFRPLVTDKGKRVGGSIRPWKQMYVVLRGHSLYLYKDKREQTTP-------SEEEQPISVNACLIDISYSET 74 (168)
T ss_dssp -CCEEEEEEEEECC------------CCEEEEEEEETTEEEEESCTTCC---------------CEECSSCEEEECSSSC
T ss_pred CCcEEEEEeeeeecccCCcccCCCCCCceEEEEEEeCCEEEEEECCcccccc-------cCCceEecccceEEEeccccC
Confidence 47899999865 556678999999999999999999998653211 122233322111 111 23
Q ss_pred CCceeEEEEecCCCCcEEEEEeCCHHHHHHHHHHHHHHHHhC
Q 012222 86 DKKLLTVLFPDGRDGRAFTLKAETSEDLYEWKTALELALAQA 127 (468)
Q Consensus 86 ~k~~~f~i~~~~~~~r~y~l~A~s~~e~~~Wi~aI~~ai~~~ 127 (468)
.++++|.|.. .+++|+|+|++++|+.+||.+|+.++...
T Consensus 75 ~~~~~F~I~t---~~r~~~l~A~s~~e~~~Wi~ai~~~~~~~ 113 (168)
T 2j59_M 75 KRKNVFRLTT---SDCECLFQAEDRDDMLAWIKTIQESSNLN 113 (168)
T ss_dssp SCSSEEEEEC---SSCEEEEECSSHHHHHHHHHHHHHHCCCC
T ss_pred CCCCEEEEEe---CCceEEEEcCCHHHHHHHHHHHHHHHhcC
Confidence 4567888874 24899999999999999999999998643
No 65
>1btn_A Beta-spectrin; signal transduction protein; HET: I3P; 2.00A {Mus musculus} SCOP: b.55.1.1 PDB: 1mph_A
Probab=99.65 E-value=5.5e-16 Score=127.72 Aligned_cols=96 Identities=20% Similarity=0.298 Sum_probs=65.0
Q ss_pred EEeeeeeee----cC--CCcCCCeeEEEEEeCCeEEEEecCCCCCC--CCCCccccccccEEecCCcce-e-ecCCCcee
Q 012222 21 KSGPLFISS----KG--IGWKSWKKRWFILTRTSLVFFKNDPSALP--QRGGEVNLTLGGIDLNNSGSV-V-VREDKKLL 90 (468)
Q Consensus 21 k~G~L~~~k----~g--~~~k~WkkRwfVL~~~~L~yyk~~~~~~~--~~~~~~~~~l~~i~l~~~~~v-~-~~~~k~~~ 90 (468)
++|||+++. .| ...++|++|||||+++.|+||+++.+... ...+ ...|++..+... . ....++++
T Consensus 1 ~eG~L~kk~~~~~~gk~~~~~~Wk~rwfvL~~~~L~yyk~~~~~~~~~~~~~-----~~~i~l~~~~~~~~~~~~~~~~~ 75 (106)
T 1btn_A 1 MEGFLNRKHEWEAHNKKASSRSWHNVYCVINNQEMGFYKDAKSAASGIPYHS-----EVPVSLKEAICEVALDYKKKKHV 75 (106)
T ss_dssp CEEEEEEEEEECSTTCBCSCCCCEEEEEEEETTEEEEESSHHHHHHTCCSSS-----CCCEECTTCEEEECSSCCSSSSE
T ss_pred CccEEEEEEEEeCCCccCCCCChhEEEEEEECCEEEEEeCCcccccCCCCCC-----cceEECCCCEEEEcccccCCccE
Confidence 489887554 11 45789999999999999999998763210 0011 123333332211 1 12345678
Q ss_pred EEEEecCCCCcEEEEEeCCHHHHHHHHHHHHHH
Q 012222 91 TVLFPDGRDGRAFTLKAETSEDLYEWKTALELA 123 (468)
Q Consensus 91 f~i~~~~~~~r~y~l~A~s~~e~~~Wi~aI~~a 123 (468)
|.|.. +++++|+|+|+|++|+.+||.+|+.|
T Consensus 76 F~i~~--~~~~~~~~~A~s~~e~~~Wi~ai~~A 106 (106)
T 1btn_A 76 FKLRL--SDGNEYLFQAKDDEEMNTWIQAISSA 106 (106)
T ss_dssp EEEEC--TTSCEEEEECSSHHHHHHHHHHHHHC
T ss_pred EEEEe--cCCCEEEEECCCHHHHHHHHHHHhcC
Confidence 87764 56799999999999999999999864
No 66
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Probab=99.63 E-value=8.1e-16 Score=144.96 Aligned_cols=100 Identities=26% Similarity=0.514 Sum_probs=81.0
Q ss_pred CCceEEEeeeeeeecCC---CcCCCeeEEEEEeCCeEEEEecCCCCCCCCCCccccccccEEecCCcceeecCCCceeEE
Q 012222 16 SNTVFKSGPLFISSKGI---GWKSWKKRWFILTRTSLVFFKNDPSALPQRGGEVNLTLGGIDLNNSGSVVVREDKKLLTV 92 (468)
Q Consensus 16 ~~~v~k~G~L~~~k~g~---~~k~WkkRwfVL~~~~L~yyk~~~~~~~~~~~~~~~~l~~i~l~~~~~v~~~~~k~~~f~ 92 (468)
...++++|||+++..+. ..+.|++|||||+++.|+||+++.+.. +.+.|.|..+..+.....++++|.
T Consensus 55 ~~~~~k~G~L~K~g~~~~~~~~k~WkkRwfvL~~~~L~Yyk~~~~~~---------~~g~I~L~~~~~v~~~~~k~~~F~ 125 (228)
T 3tfm_A 55 KQEALKQGWLHNNGGGSSTLSRRNWKKRWFVLRQSKLMYFENDSEEK---------LKGTVEVRSAKEIIDNTNKENGID 125 (228)
T ss_dssp CCCSSEEEEEEECGGGCSSSCGGGCEEEEEEECSSEEEEESSTTCCS---------EEEEEEGGGCSEEEEETTTTSEEE
T ss_pred CCCcceEEEEEEECCCcCCcccCCceEEEEEEeCCEEEEEeCCCCcc---------eeEEEEcCCCEEeccCCCCCcEEE
Confidence 34689999886443221 238999999999999999999987754 567888888876666667778888
Q ss_pred EEecCCCCcEEEEEeCCHHHHHHHHHHHHHHHHhC
Q 012222 93 LFPDGRDGRAFTLKAETSEDLYEWKTALELALAQA 127 (468)
Q Consensus 93 i~~~~~~~r~y~l~A~s~~e~~~Wi~aI~~ai~~~ 127 (468)
|.. .+++|+|+|+|++|+++|+.+|+.++...
T Consensus 126 I~t---~~r~~~l~A~s~~e~~~Wv~aL~~~i~~~ 157 (228)
T 3tfm_A 126 IIM---ADRTFHLIAESPEDASQWFSVLSQVHSST 157 (228)
T ss_dssp EEC---SSCEEEEECSSHHHHHHHHHHHHHHHTCC
T ss_pred EEc---CCcEEEEEcCCHHHHHHHHHHHHHHHhcc
Confidence 864 46999999999999999999999999754
No 67
>2dtc_A RAL guanine nucleotide exchange factor ralgps1A; PH domain, protein binding, structural genomics, NPPSFA; 1.70A {Mus musculus}
Probab=99.63 E-value=3.5e-15 Score=126.07 Aligned_cols=107 Identities=14% Similarity=0.229 Sum_probs=73.0
Q ss_pred EEEeeeeee---ecCCC--cCCCeeEEEEEeCCeEEEEecCCCCCCCCCCccccccccEEecCCcceeec-CCCceeEEE
Q 012222 20 FKSGPLFIS---SKGIG--WKSWKKRWFILTRTSLVFFKNDPSALPQRGGEVNLTLGGIDLNNSGSVVVR-EDKKLLTVL 93 (468)
Q Consensus 20 ~k~G~L~~~---k~g~~--~k~WkkRwfVL~~~~L~yyk~~~~~~~~~~~~~~~~l~~i~l~~~~~v~~~-~~k~~~f~i 93 (468)
.++|+|.++ |.|.+ +++|++|||||+|+.|+||+...-........-..+.+.|.|..+...... ..++++|.+
T Consensus 2 ~~~G~L~rk~llK~G~k~~~ksWkr~W~vL~g~~L~yf~~~~~~~~~~~~~~~~P~~~i~L~g~~V~~~e~~~~~~~F~L 81 (126)
T 2dtc_A 2 TMEGPLRRKTLLKEGRKPALSSWTRYWVVLSGATLLYYGAKSLRGTDRKHYKSTPGKKVSIVGWMVQLPDDPEHPDIFQL 81 (126)
T ss_dssp CEEEEEEEEEEEBTTBCCSSCCCEEEEEEEETTEEEEEEBSSSCCSSGGGBCSSCSEEEECTTCEEECCCCTTSTTEEEE
T ss_pred ceeeeeeeeehhhcCCcccccCcccEEEEEeCCEEEEEcccccccccccccccCCCceEEeCCCEEEecCCCCCCCEEEE
Confidence 578888754 55553 789999999999999999997641110000000124455666554322112 235678888
Q ss_pred EecCCCCcEEEEEeCCHHHHHHHHHHHHHHHHhC
Q 012222 94 FPDGRDGRAFTLKAETSEDLYEWKTALELALAQA 127 (468)
Q Consensus 94 ~~~~~~~r~y~l~A~s~~e~~~Wi~aI~~ai~~~ 127 (468)
.. ...|.+|.|+|+|++++..|+++|+.|+...
T Consensus 82 ~~-~~~G~~Y~fqA~s~~~~~~W~~ai~~a~~~~ 114 (126)
T 2dtc_A 82 NN-PDKGNVYKFQTGSRFHAILWHKHLDDACKSS 114 (126)
T ss_dssp EC-TTSCSEEEEECSSHHHHHHHHHHHHHHHTSC
T ss_pred ee-CCCCCEEEEeCCCHHHHHHHHHHHHHHHhcC
Confidence 73 3358899999999999999999999999754
No 68
>1qqg_A IRS-1, insulin receptor substrate 1; beta-sandwhich, signal transduction; 2.30A {Homo sapiens} SCOP: b.55.1.2 b.55.1.2 PDB: 1irs_A*
Probab=99.60 E-value=1.3e-15 Score=146.20 Aligned_cols=97 Identities=25% Similarity=0.363 Sum_probs=72.2
Q ss_pred CCCCCceEEEeeeeeeecCCCcCCCeeEEEEEeCC-------eEEEEecCCC-----CCCCCCCccccccccEEecCCcc
Q 012222 13 PGASNTVFKSGPLFISSKGIGWKSWKKRWFILTRT-------SLVFFKNDPS-----ALPQRGGEVNLTLGGIDLNNSGS 80 (468)
Q Consensus 13 ~~~~~~v~k~G~L~~~k~g~~~k~WkkRwfVL~~~-------~L~yyk~~~~-----~~~~~~~~~~~~l~~i~l~~~~~ 80 (468)
+.....++|+|||+++ |+||||||||+++ .|.||+++++ .. +.+.|.|..+..
T Consensus 4 ~~~~~~v~k~G~L~K~------K~WkkRwFVL~~~~~~G~~~~L~YYk~~~~~~~~~~~---------p~g~I~L~~~~~ 68 (264)
T 1qqg_A 4 SDGFSDVRKVGYLRKP------KSMHKRFFVLRAASEAGGPARLEYYENEKKWRHKSSA---------PKRSIPLESCFN 68 (264)
T ss_dssp -----CEEEEEEEECT------TTCCEEEEEEECCBTTTBSSEEEEESSHHHHHTTCSC---------CSEEEEGGGEEE
T ss_pred CCCCCCccEEEEEEEC------CCCEeEEEEEECCCCCCCCCEEEEECCCccccccccC---------cceEEEeeceEE
Confidence 3345689999988633 7999999999988 9999999865 23 456788877765
Q ss_pred eeec--CCCceeEEEEecCCCCcEEEEEeCCHHHHHHHHHHHHHHHHhC
Q 012222 81 VVVR--EDKKLLTVLFPDGRDGRAFTLKAETSEDLYEWKTALELALAQA 127 (468)
Q Consensus 81 v~~~--~~k~~~f~i~~~~~~~r~y~l~A~s~~e~~~Wi~aI~~ai~~~ 127 (468)
|... ..++++|.|.. ..|+|+|+|+|++|+++|+.+|+.++...
T Consensus 69 V~~~~~~~~~~~F~I~t---~~rty~l~A~se~e~~~Wi~aL~~~~~~~ 114 (264)
T 1qqg_A 69 INKRADSKNKHLVALYT---RDEHFAIAADSEAEQDSWYQALLQLHNRA 114 (264)
T ss_dssp EEEECCSSCSSEEEEEE---SSCEEEEECSSHHHHHHHHHHHHHHC---
T ss_pred EEeccCCCCCcEEEEEE---CCEEEEEEeCCHHHHHHHHHHHHHHHHhc
Confidence 5433 34567888764 37999999999999999999999998754
No 69
>2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A
Probab=99.60 E-value=3.2e-15 Score=151.96 Aligned_cols=99 Identities=21% Similarity=0.274 Sum_probs=71.4
Q ss_pred CceEEEeeeeeeecCC-CcCCCeeEEEEEeCCeEEEEecCCCCCCCCCCccccccccEEecCCcceee-cCCCceeEEEE
Q 012222 17 NTVFKSGPLFISSKGI-GWKSWKKRWFILTRTSLVFFKNDPSALPQRGGEVNLTLGGIDLNNSGSVVV-REDKKLLTVLF 94 (468)
Q Consensus 17 ~~v~k~G~L~~~k~g~-~~k~WkkRwfVL~~~~L~yyk~~~~~~~~~~~~~~~~l~~i~l~~~~~v~~-~~~k~~~f~i~ 94 (468)
+.++|+|||+++.+++ .++.|+||||||+++.|+||++ .+.. +.+.|++..|..... ..++++||.|.
T Consensus 276 ~~~~k~G~L~K~~~~~~~~~~WkkRwfvL~~~~L~y~k~-~~~~---------~~~~i~l~~~~v~~~~~~~r~~~F~i~ 345 (385)
T 2q13_A 276 NLTRKAGYLNARNKTGLVSSTWDRQFYFTQGGNLMSQAR-GDVA---------GGLAMDIDNCSVMAVDCEDRRYCFQIT 345 (385)
T ss_dssp CCSCCEEEEEEC--------CCEEEEEEEETTEEEEECS-SCSS---------CEEEEECTTCEEEEECCTTCSSEEEEE
T ss_pred CCccEEEEEEEecCCCCCcCCceeEEEEEECCEEEEecC-CCcC---------CCceEEccceEEEeccccCCCceEEEE
Confidence 4789999998654433 2457999999999999999998 3322 234566666543222 25677899886
Q ss_pred ecCCCC-cEEEEEeCCHHHHHHHHHHHHHHHHhC
Q 012222 95 PDGRDG-RAFTLKAETSEDLYEWKTALELALAQA 127 (468)
Q Consensus 95 ~~~~~~-r~y~l~A~s~~e~~~Wi~aI~~ai~~~ 127 (468)
. +++ ++|+|+|+|++|+.+||.||+.++...
T Consensus 346 t--~~~~~~~~l~A~s~~e~~~Wi~ai~~~~~~~ 377 (385)
T 2q13_A 346 S--FDGKKSSILQAESKKDHEEWICTINNISKQI 377 (385)
T ss_dssp C--TTSCBCCCEECSSHHHHHHHHHHHHHHHTTC
T ss_pred e--CCCCeEEEEEeCCHHHHHHHHHHHHHHHHhh
Confidence 4 333 899999999999999999999999754
No 70
>4h8s_A DCC-interacting protein 13-beta; BAR domain, pleckstrin homology domain, adaptor protein, RAB signaling protein; 3.50A {Homo sapiens}
Probab=99.59 E-value=2.4e-15 Score=153.97 Aligned_cols=102 Identities=21% Similarity=0.262 Sum_probs=74.7
Q ss_pred CCceEEEeeeeeee-cCCCcCCCeeEEEEEeCCeEEEEecCCCCCCCCCCccccccccEEecCCcceeecCCCceeEEEE
Q 012222 16 SNTVFKSGPLFISS-KGIGWKSWKKRWFILTRTSLVFFKNDPSALPQRGGEVNLTLGGIDLNNSGSVVVREDKKLLTVLF 94 (468)
Q Consensus 16 ~~~v~k~G~L~~~k-~g~~~k~WkkRwfVL~~~~L~yyk~~~~~~~~~~~~~~~~l~~i~l~~~~~v~~~~~k~~~f~i~ 94 (468)
.+.+.|+||||++. .|+.++.|+||||||+++.|+||+...... ++. +.+..+.+.. ....++++||.|.
T Consensus 298 ~~~~~k~G~L~k~~~~g~~~~~W~rrwfvl~~~~l~y~~~~~~~~---~~~--~~l~~~~v~~----~~~~~r~~cF~i~ 368 (407)
T 4h8s_A 298 RNLIQKAGYLNLRNKTGLVTTTWERLYFFTQGGNLMCQPRGAVAG---GLI--QDLDNCSVMA----VDCEDRRYCFQIT 368 (407)
T ss_dssp CSCSCCEEEEEEEEECSSSCEEEEEEEEEECSSCEECCCTTCSSC---CCC--BCSSCCEEEE----ECCTTCSSEEEEE
T ss_pred CCcceeeceeeeeccCCCCCCCceEEEEEEECCEEEEEeCCCCCC---CeE--EECCceEEEE----CCCCCCCceEEEE
Confidence 45789999999864 466678999999999999999998754321 111 1222322221 1235678999886
Q ss_pred ecCCCCcEEEEEeCCHHHHHHHHHHHHHHHHhC
Q 012222 95 PDGRDGRAFTLKAETSEDLYEWKTALELALAQA 127 (468)
Q Consensus 95 ~~~~~~r~y~l~A~s~~e~~~Wi~aI~~ai~~~ 127 (468)
.. ...++|+|+|+|++|+.+||.||+++++++
T Consensus 369 ~~-~~~~~~~l~A~s~~e~~~Wi~ai~~a~~~~ 400 (407)
T 4h8s_A 369 TP-NGKSGIILQAESRKENEEWICAINNISRQI 400 (407)
T ss_dssp CT-TSSCCEEEECSSSHHHHHHHHHHHHHHSCC
T ss_pred ec-CCCceEEEEcCCHHHHHHHHHHHHHHHHHh
Confidence 52 224789999999999999999999999865
No 71
>2r09_A Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-phosphoinositide, pleckst homology domain, guanine-nucleotide releasing factor, signa protein; HET: 4IP PGE PE5; 1.90A {Mus musculus} SCOP: a.118.3.1 b.55.1.1 PDB: 2r0d_A*
Probab=99.59 E-value=3.8e-15 Score=148.97 Aligned_cols=103 Identities=24% Similarity=0.384 Sum_probs=78.7
Q ss_pred ceEEEeeeeeeecCCCcCCCeeEEEEEeCCeEEEEecCCCCCCCCCCccccccccEEecCCccee-ecCCCceeEEEEec
Q 012222 18 TVFKSGPLFISSKGIGWKSWKKRWFILTRTSLVFFKNDPSALPQRGGEVNLTLGGIDLNNSGSVV-VREDKKLLTVLFPD 96 (468)
Q Consensus 18 ~v~k~G~L~~~k~g~~~k~WkkRwfVL~~~~L~yyk~~~~~~~~~~~~~~~~l~~i~l~~~~~v~-~~~~k~~~f~i~~~ 96 (468)
.++++|||+ |+|+..++|++|||||+++.|+||+++.+.. +.+.|.|..+.... ....+++||.|...
T Consensus 212 ~~~k~G~L~--K~g~~~k~WkkRwFVL~~~~L~Yyk~~~~~~---------p~G~I~L~~~~v~~~~~~~~~~~F~I~~~ 280 (347)
T 2r09_A 212 NPDREGWLL--KLGGRVKTWKRRWFILTDNCLYYFEYTTDKE---------PRGIIPLENLSIREVEDPRKPNCFELYNP 280 (347)
T ss_dssp CCCEEEEEE--EECSSSCCEEEEEEEEETTEEEEESSTTCSS---------CSEEEECTTCEEEEECCSSCSSEEEEECS
T ss_pred ccccCCeeE--ecCCCcccceeEEEEEcCCEEEEEcCCCccC---------CcEEEEcCCeEEEEccCCCCCCEEEEEeC
Confidence 468999886 6666789999999999999999999987755 34566666654222 22356688888643
Q ss_pred C-------------------CCCcEEEEEeCCHHHHHHHHHHHHHHHHhCCcch
Q 012222 97 G-------------------RDGRAFTLKAETSEDLYEWKTALELALAQAPSAA 131 (468)
Q Consensus 97 ~-------------------~~~r~y~l~A~s~~e~~~Wi~aI~~ai~~~p~~~ 131 (468)
. ...|+|+|+|+|++|+.+|+.+|+.++...|...
T Consensus 281 ~~~~~~~~~~k~~~~g~~v~~~~r~y~l~A~s~ee~~~Wi~aI~~ai~~~~~~~ 334 (347)
T 2r09_A 281 SHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISRDPFYD 334 (347)
T ss_dssp SSTTCCCCCEEECTTSCEEECCCSCEEEECSSHHHHHHHHHHHHHHHHCCHHHH
T ss_pred CccccccccccccccccccccCceEEEEECCCHHHHHHHHHHHHHHHhcCCCHH
Confidence 2 1258999999999999999999999998765443
No 72
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=99.56 E-value=1.4e-14 Score=146.73 Aligned_cols=97 Identities=24% Similarity=0.392 Sum_probs=74.8
Q ss_pred CCceEEEeeeeeeecCCCc-CCCeeEEEEEeCCeEEEEecCCCCCCCCCCccccccccEEecCCcce------eecCC--
Q 012222 16 SNTVFKSGPLFISSKGIGW-KSWKKRWFILTRTSLVFFKNDPSALPQRGGEVNLTLGGIDLNNSGSV------VVRED-- 86 (468)
Q Consensus 16 ~~~v~k~G~L~~~k~g~~~-k~WkkRwfVL~~~~L~yyk~~~~~~~~~~~~~~~~l~~i~l~~~~~v------~~~~~-- 86 (468)
...++|+|||+ |+|... ++||+|||||+++.|+||+++.+.. ++|.|.|..+..+ .+...
T Consensus 266 ~~~~~k~G~L~--K~g~~~~k~WKkRwFVL~~~~L~YYk~~~d~~---------~~G~I~L~~~~~~~~v~~~~~~~~~~ 334 (386)
T 3lju_X 266 SRNYLKEGYME--KTGPKQTEGFRKRWFTMDDRRLMYFKDPLDAF---------ARGEVFIGSKESGYTVLHGFPPSTQG 334 (386)
T ss_dssp SCCCSEEEEEE--ECCTTSCSCCEEEEEEEETTEEEEESSTTCSB---------CSEEEECCCGGGTCEEEESCCTTCCS
T ss_pred ccccceeeeEE--EECCCCCCCCcccEEEEECCEEEEEecCCCcc---------cceEEEeecceeeeeecccCCccccc
Confidence 35689999775 667665 9999999999999999999988765 4456666554332 11111
Q ss_pred --CceeEEEEecCCCCcEEEEEeCCHHHHHHHHHHHHHHHHh
Q 012222 87 --KKLLTVLFPDGRDGRAFTLKAETSEDLYEWKTALELALAQ 126 (468)
Q Consensus 87 --k~~~f~i~~~~~~~r~y~l~A~s~~e~~~Wi~aI~~ai~~ 126 (468)
.+++|.|.. .+|+|+|+|+|++|+++||.||+.+|.+
T Consensus 335 ~~~~~~F~I~t---~~rty~l~A~s~~e~~~Wi~aL~~~i~~ 373 (386)
T 3lju_X 335 HHWPHGITIVT---PDRKFLFACETESDQREWVAAFQKAVDR 373 (386)
T ss_dssp CCSCEEEEEEC---SSCEEEEEESSHHHHHHHHHHHHHHHHS
T ss_pred cCCCcEEEEEe---CCeEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 146777763 3699999999999999999999999986
No 73
>2rov_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}
Probab=99.54 E-value=1e-14 Score=122.60 Aligned_cols=99 Identities=14% Similarity=0.292 Sum_probs=69.7
Q ss_pred EEeeeeeeecCCCcC-CCeeEEEEEeCCeEEEEecCCCC-CCCCCCccccccccEEecCCcce---------ee-cCCCc
Q 012222 21 KSGPLFISSKGIGWK-SWKKRWFILTRTSLVFFKNDPSA-LPQRGGEVNLTLGGIDLNNSGSV---------VV-REDKK 88 (468)
Q Consensus 21 k~G~L~~~k~g~~~k-~WkkRwfVL~~~~L~yyk~~~~~-~~~~~~~~~~~l~~i~l~~~~~v---------~~-~~~k~ 88 (468)
.+|||.+.|+|+..+ +|++|||||+++.|+||+++.+. ... +.+.|+++....| .. ..+.+
T Consensus 3 ~eGwl~~pk~~~~~k~~Wkkr~~vL~~~kL~~y~~~~~~~~~~-------p~~~Idl~~~~~V~~V~~~d~i~~~~~~~p 75 (117)
T 2rov_A 3 LEGWLSLPVRNNTKKFGWVKKYVIVSSKKILFYDSEQDKEQSN-------PYMVLDIDKLFHVRPVTQTDVYRADAKEIP 75 (117)
T ss_dssp SEEEEECCCCSSSSCCCCCEEEEEEETTEEEEESCHHHHHTTC-------CSEEECGGGEEEEEECCTTTCSSSCTTTGG
T ss_pred eEEEEEeecCCCccCCCcEEEEEEEECCEEEEEECCCCcccCC-------ceEEEECcccEEEEEcccccccccccccCC
Confidence 589887656777777 99999999999999999986542 100 2234444332221 11 12345
Q ss_pred eeEEEEecC---CCCcEEEEEeCCHHHHHHHHHHHHHHHHh
Q 012222 89 LLTVLFPDG---RDGRAFTLKAETSEDLYEWKTALELALAQ 126 (468)
Q Consensus 89 ~~f~i~~~~---~~~r~y~l~A~s~~e~~~Wi~aI~~ai~~ 126 (468)
+.|.|.... ...++++|.|+|++|+++||.+|+++|.+
T Consensus 76 ~iF~I~~~~~~~~~~~~l~l~A~s~~e~~~WV~aL~~~i~~ 116 (117)
T 2rov_A 76 RIFQILYANEGISSAKNLLLLANSTEEQQKWVSRLVKKIPK 116 (117)
T ss_dssp GEEEEEECSSSSTTCEEEEEECSSHHHHHHHHHHHHHHCTT
T ss_pred cEEEEEeCCCCCCCCcEEEEEeCCHHHHHHHHHHHHHHhcc
Confidence 678776532 34589999999999999999999998753
No 74
>3tca_A Amyloid beta A4 precursor protein-binding family 1-interacting protein; RA domain, RBD, PH domain; 2.35A {Mus musculus}
Probab=99.52 E-value=3.1e-14 Score=138.85 Aligned_cols=105 Identities=16% Similarity=0.249 Sum_probs=72.0
Q ss_pred ceEEEeeeeeeecCCCcCCCeeEEEEEeCCeEEEEecCCCCCCCCCCccccccccEEecCCcce--eecCCCceeEEEEe
Q 012222 18 TVFKSGPLFISSKGIGWKSWKKRWFILTRTSLVFFKNDPSALPQRGGEVNLTLGGIDLNNSGSV--VVREDKKLLTVLFP 95 (468)
Q Consensus 18 ~v~k~G~L~~~k~g~~~k~WkkRwfVL~~~~L~yyk~~~~~~~~~~~~~~~~l~~i~l~~~~~v--~~~~~k~~~f~i~~ 95 (468)
.+.++|||| |+|...++|++|||||+++.|+||+++.+..|.+...+ ..+..+.+...... .....+++||.|.+
T Consensus 167 ~p~~~G~L~--k~~~~~k~WkkR~fvL~~~~L~yyk~~~~~~~~~~i~l-~~l~~~~v~~~~~~~~~~~~~~~~~F~i~~ 243 (291)
T 3tca_A 167 VPELEGALY--LKEDGKKSWKRRYFLLRASGIYYVPKGKTKTSRDLACF-IQFENVNIYYGIQCKMKYKAPTDHCFVLKH 243 (291)
T ss_dssp CCCCEEEEE--EECTTSSCEEEEEEEECSSEEEECCTTCCSSTTTCEEE-EEGGGCEEEEECSHHHHHCCSSSCEEEEEC
T ss_pred CCceEEEEE--EeCCCCCCceEEEEEEeCCEEEEEecCccccccCceee-ccceeEEEEecCccccccCCCCCeEEEEEc
Confidence 457999887 55666799999999999999999999887765442111 11112211111100 11235678998865
Q ss_pred cC---CCCcEEEEEeCCHHHHHHHHHHHHHHHH
Q 012222 96 DG---RDGRAFTLKAETSEDLYEWKTALELALA 125 (468)
Q Consensus 96 ~~---~~~r~y~l~A~s~~e~~~Wi~aI~~ai~ 125 (468)
.. ...++|+|+|+|++|+..||.||+.|..
T Consensus 244 ~~~~~~~~~~~~l~A~s~~e~~~Wi~air~Ak~ 276 (291)
T 3tca_A 244 PQIQKESQYIKYLCCDDARTLSQWVMGIRIAKY 276 (291)
T ss_dssp TTCCSCCTTSEEEECSSHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCceEEEEECCCHHHHHHHHHHHHHHhc
Confidence 32 2347899999999999999999998764
No 75
>2fjl_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; beta-barrel, hydrolase; NMR {Rattus norvegicus} SCOP: b.55.1.1
Probab=99.51 E-value=1e-13 Score=119.44 Aligned_cols=105 Identities=13% Similarity=0.281 Sum_probs=76.4
Q ss_pred EEEeeeeeeecCCCcCCCeeEEEEEeCCeEEEEecCC---------CCC----C-------C-----C------------
Q 012222 20 FKSGPLFISSKGIGWKSWKKRWFILTRTSLVFFKNDP---------SAL----P-------Q-----R------------ 62 (468)
Q Consensus 20 ~k~G~L~~~k~g~~~k~WkkRwfVL~~~~L~yyk~~~---------~~~----~-------~-----~------------ 62 (468)
+|+||||++ +...+.|++|||||+++.|+|++... +.. | . +
T Consensus 2 ~k~G~L~~~--~~~~~~w~~~~fvL~~~~L~y~~e~s~~~~~~~~e~~~~~~~~~~~~~~~n~~fh~~~~~~~e~~~~~l 79 (150)
T 2fjl_A 2 IKNGILYLE--DPVNHEWYPHYFVLTSSKIYYSEETSSDQGNEDEEEPKEASGSTELHSSLEVLFQGPNPAILEPEREHL 79 (150)
T ss_dssp CEEEEEEEE--ETTTTEEEEEEEEEETTEEEECCCCSCSSCCSCCCCSCCCCCSCCCCCCSSSGGGSSCSTTSCTTCSSS
T ss_pred CcceEEEee--cCCCCCceEeEEEEECCEEEEEeeccccccccCcccccccCCchhhcccchhccccCCccccchhHhcc
Confidence 699999854 45678999999999999999998221 111 0 0 0
Q ss_pred ---CCccccccccEEecCCcceeec---CCCceeEEEEecCCCCcEEEEEeCCHHHHHHHHHHHHHHHHh
Q 012222 63 ---GGEVNLTLGGIDLNNSGSVVVR---EDKKLLTVLFPDGRDGRAFTLKAETSEDLYEWKTALELALAQ 126 (468)
Q Consensus 63 ---~~~~~~~l~~i~l~~~~~v~~~---~~k~~~f~i~~~~~~~r~y~l~A~s~~e~~~Wi~aI~~ai~~ 126 (468)
...-++..|.|+|..|...... ..+.+.|.|.+...+.++|.|.|+|.+||.+||++|++|+..
T Consensus 80 ~E~~~lG~l~kG~IdL~gc~V~~~~~~~~~~~~vF~I~~~~~~~~~~~laAds~Eem~dW~kaIreaa~~ 149 (150)
T 2fjl_A 80 DENSPLGDLLRGVLDVPACQIAIRPEGKNNRLFVFSISMPSVAQWSLDVAADSQEELQDWVKKIREVAQT 149 (150)
T ss_dssp CTTTTTTTCCCEEECSTTCEEEEETTCSSSCSCEEEEECTTTSSCCEEEEESSHHHHHHHHHHHHHHHTT
T ss_pred cccccccccccceEecCccEEEeccCCCCCCceEEEEeCCCCCCceEEEEeCCHHHHHHHHHHHHHHHhh
Confidence 0001223677888877654333 346788988876666789999999999999999999999864
No 76
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=99.46 E-value=8.6e-14 Score=140.95 Aligned_cols=96 Identities=15% Similarity=0.244 Sum_probs=70.6
Q ss_pred eEEEeeeeeeecCCCcCCCeeEEEEE--eCCeEEEEecCCCCCCCCCCccccccccEEecCCcceee--cCCCceeEEEE
Q 012222 19 VFKSGPLFISSKGIGWKSWKKRWFIL--TRTSLVFFKNDPSALPQRGGEVNLTLGGIDLNNSGSVVV--REDKKLLTVLF 94 (468)
Q Consensus 19 v~k~G~L~~~k~g~~~k~WkkRwfVL--~~~~L~yyk~~~~~~~~~~~~~~~~l~~i~l~~~~~v~~--~~~k~~~f~i~ 94 (468)
..|+|||| |+|+..+.|++||||| +++.|+||+++.+.. +.+.|.|..+..+.. ...+.++|.|.
T Consensus 146 ~~keG~L~--KrG~~~k~WkrRwFVL~~~~~~L~Yy~~~~~~~---------p~g~I~L~~~~~~~~~~~~~~~~~f~I~ 214 (386)
T 3lju_X 146 GYREGFLW--KRGRDNGQFLSRKFVLTEREGALKYFNRNDAKE---------PKAVMKIEHLNATFQPAKIGHPHGLQVT 214 (386)
T ss_dssp SEEEEEEE--EECSSSCCEEEEEEEEETTTTEEEEEC-----C---------CSEEEEGGGEEEEECHHHHTSTTCEEEE
T ss_pred ccccccee--eeccccCCceEEEEEEEcCCCEEEEECCCCccC---------cccEEEeeccEEEEcccccCCCceEEEE
Confidence 58999876 7777789999999999 899999999988776 345676766443332 13566777764
Q ss_pred -ecCCCCcEEEEEeCCHHHHHHHHHHHHHHHH
Q 012222 95 -PDGRDGRAFTLKAETSEDLYEWKTALELALA 125 (468)
Q Consensus 95 -~~~~~~r~y~l~A~s~~e~~~Wi~aI~~ai~ 125 (468)
......|+|+|+|+|.+|+.+|+++|+.+..
T Consensus 215 ~~~~~~~R~y~l~A~s~~e~~~Wi~aIr~a~~ 246 (386)
T 3lju_X 215 YLKDNSTRNIFIYHEDGKEIVDWFNALRAARF 246 (386)
T ss_dssp EEETTEEEEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred EecCCCceEEEEEcCCHHHHHHHHHhhhhccc
Confidence 2344569999999999999999999998753
No 77
>2ys3_A UNC-112-related protein 2; PH domain, kindlin-3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.45 E-value=4.1e-13 Score=113.39 Aligned_cols=100 Identities=17% Similarity=0.307 Sum_probs=70.7
Q ss_pred ceEEEeeeeee-ecCCCcCCCeeEEEEEeCCeEEEEecCCCCCCCCCCccccccccEEecCCcceeec---CCCceeEEE
Q 012222 18 TVFKSGPLFIS-SKGIGWKSWKKRWFILTRTSLVFFKNDPSALPQRGGEVNLTLGGIDLNNSGSVVVR---EDKKLLTVL 93 (468)
Q Consensus 18 ~v~k~G~L~~~-k~g~~~k~WkkRwfVL~~~~L~yyk~~~~~~~~~~~~~~~~l~~i~l~~~~~v~~~---~~k~~~f~i 93 (468)
....+|||-+. .++...|.||+|||||+++.|+|||++.+.. +. +++.|.|..|. |.+. ..++|.+.+
T Consensus 8 ~pel~~~l~~~~pkk~tlK~~KrrWFvlk~~~L~YyK~kee~~--~e-----Pig~I~L~gce-V~pd~~~~~~kf~ikl 79 (137)
T 2ys3_A 8 IPELKDHLRIFRPRKLTLKGYRQHWVVFKETTLSYYKSQDEAP--GD-----PIQQLNLKGCE-VVPDVNVSGQKFCIKL 79 (137)
T ss_dssp CCCEECCCEECCTTSCCSSSSCCCEEEECSSCEEEESSTTTTT--SC-----CSCCBCTTTCE-EEECCBGGGTBEEEEE
T ss_pred CcchhHHHHhhCccccccccceeEEEEEeCCEEEEECCchhcc--CC-----CceEEECCCCE-EeccccccCCceEEEE
Confidence 45788977533 2334588999999999999999999987752 11 34455555544 3222 356676655
Q ss_pred Eec-CCCCcEEEEEeCCHHHHHHHHHHHHHHHH
Q 012222 94 FPD-GRDGRAFTLKAETSEDLYEWKTALELALA 125 (468)
Q Consensus 94 ~~~-~~~~r~y~l~A~s~~e~~~Wi~aI~~ai~ 125 (468)
... ....++|+|.|+|++++.+||.|++.|..
T Consensus 80 ~iPs~~g~r~y~l~cdsEeqy~~WMaA~rlAsk 112 (137)
T 2ys3_A 80 LVPSPEGMSEIYLRCQDEQQYARWMAGCRLASK 112 (137)
T ss_dssp EEECSSSEEEEEEEESSHHHHHHHHHHHHHHHT
T ss_pred EccCCCCceEEEEECCCHHHHHHHHHHHHHhcc
Confidence 432 22348999999999999999999998764
No 78
>2d9w_A Docking protein 2; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.41 E-value=1.1e-12 Score=108.49 Aligned_cols=101 Identities=18% Similarity=0.167 Sum_probs=74.2
Q ss_pred CCceEEEeeeeeeecCCCcCCCeeEEEEEeCC------eEEEEecCCCCCCCCCCccccccccEEecCCcceeecCCC--
Q 012222 16 SNTVFKSGPLFISSKGIGWKSWKKRWFILTRT------SLVFFKNDPSALPQRGGEVNLTLGGIDLNNSGSVVVREDK-- 87 (468)
Q Consensus 16 ~~~v~k~G~L~~~k~g~~~k~WkkRwfVL~~~------~L~yyk~~~~~~~~~~~~~~~~l~~i~l~~~~~v~~~~~k-- 87 (468)
...++|+||||++..+...|.|+||||||.+. .|-||..+.... .+.. +.+.|.|++|.+|.+....
T Consensus 9 ~e~~vk~G~L~~q~q~~fgkKWrk~w~vLy~~S~~GvaRLE~yd~~ek~~--r~~~---~rrVIrLsdCisV~~~~~e~~ 83 (127)
T 2d9w_A 9 GDGAVKQGFLYLQQQQTFGKKWRRFGASLYGGSDCALARLELQEGPEKPR--RCEA---ARKVIRLSDCLRVAEAGGEAS 83 (127)
T ss_dssp CCCSSEEEEEEECBCSSSSCBCCEEEEEEECCSSSSCCEEEEECCCSCSS--SCSC---CEEEECGGGEEEEEECCSCSS
T ss_pred cCccccceEEEecccchhhhhhheeEEEEecCCCCCceeeeeeeccCccc--cCCC---CceEEEhhhCCeEecccCccC
Confidence 45789999999988755556799999999754 699999875432 2211 4578888888887654332
Q ss_pred --c--eeEEEEecCCCCcEEEEEeCCHHHHHHHHHHHHHHHH
Q 012222 88 --K--LLTVLFPDGRDGRAFTLKAETSEDLYEWKTALELALA 125 (468)
Q Consensus 88 --~--~~f~i~~~~~~~r~y~l~A~s~~e~~~Wi~aI~~ai~ 125 (468)
+ +.|.+.+ ..++|+|+|++ .|+.+||.+|....-
T Consensus 84 ~pk~~~aF~l~T---~er~~~laAe~-~E~~~Wi~~ic~~aF 121 (127)
T 2d9w_A 84 SPRDTSAFFLET---KERLYLLAAPA-AERGDWVQAICLLAF 121 (127)
T ss_dssp SCSSCEEEEEEE---SSCEEEEEECH-HHHHHHHHHHHHHHT
T ss_pred CCCcceEEEEEe---CCcEEEEEeCc-HHHHHHHHHHHHHhc
Confidence 2 4455543 46999999996 599999999998763
No 79
>3a8n_A TIAM-1, T-lymphoma invasion and metastasis-inducing protein 1; guanine nucleotide exchange factor, guanine-nucleotide releasing factor, lipoprotein; 4.50A {Mus musculus}
Probab=99.37 E-value=4.3e-13 Score=128.53 Aligned_cols=105 Identities=26% Similarity=0.377 Sum_probs=68.9
Q ss_pred CCceEEEeeeeee-----ecC-----CCcCCCeeEEEEEeCCeEEEEecCCCCCCCCCCccccccccEEecCCcce-eec
Q 012222 16 SNTVFKSGPLFIS-----SKG-----IGWKSWKKRWFILTRTSLVFFKNDPSALPQRGGEVNLTLGGIDLNNSGSV-VVR 84 (468)
Q Consensus 16 ~~~v~k~G~L~~~-----k~g-----~~~k~WkkRwfVL~~~~L~yyk~~~~~~~~~~~~~~~~l~~i~l~~~~~v-~~~ 84 (468)
...+.|+|||..+ +++ ...++|++|||||+++.|+||+++....... ...+.+.|.|..+... ...
T Consensus 8 ~~~v~k~G~L~rK~~l~~~k~~K~~~~~~r~Wkk~w~VLkg~~L~fYKde~~~~~~~---~~~p~~~I~L~ga~v~~a~d 84 (279)
T 3a8n_A 8 QGTVRKAGALAVKNFLVHKKNKKVESATRRKWKHYWVSLKGCTLFFYETDGRSGIDH---NSVPKHAVWVENSIVQAVPE 84 (279)
T ss_dssp --CCSCEEEEEEEEEEEEETTTEEECCCCCCCEEEEEEEETTEECCBCCC-----------CCCSSCCBCCSCEECCCTT
T ss_pred CCceeEEEEEEEEEEecccCCcccCCccCCCCeEEEEEEeCCEEEEEeccccccccc---ccCCCceEeccCcEEEeccc
Confidence 3568999999743 221 1368999999999999999999986532110 0012223444433322 112
Q ss_pred -CCCceeEEEEecCCCCcEEEEEeCCHHHHHHHHHHHHHHHH
Q 012222 85 -EDKKLLTVLFPDGRDGRAFTLKAETSEDLYEWKTALELALA 125 (468)
Q Consensus 85 -~~k~~~f~i~~~~~~~r~y~l~A~s~~e~~~Wi~aI~~ai~ 125 (468)
..++++|.+.. .++++|+|+|++.+||+.|+.+|+.++.
T Consensus 85 ~~kKk~vF~L~t--~~g~~yLFQA~s~eEm~~WI~aI~~a~~ 124 (279)
T 3a8n_A 85 HPKKDFVFCLSN--SLGDAFLFQTTSQTELENWITAIHSACA 124 (279)
T ss_dssp SSSSCSCCCEEE--TTTEEEECCCSCHHHHHHHHHHHHHHHH
T ss_pred cCCCCcEEEEEc--CCCCEEEEeCCCHHHHHHHHHHHHHHHh
Confidence 34556777754 5789999999999999999999999986
No 80
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=99.33 E-value=2.2e-12 Score=133.24 Aligned_cols=104 Identities=21% Similarity=0.332 Sum_probs=71.9
Q ss_pred CceEEEeeeeeeecCCCcCCCeeEEEEEe-CCeEEEEecCCCCCCCCCCccccccccEEecCCcceeecCCCceeEEEEe
Q 012222 17 NTVFKSGPLFISSKGIGWKSWKKRWFILT-RTSLVFFKNDPSALPQRGGEVNLTLGGIDLNNSGSVVVREDKKLLTVLFP 95 (468)
Q Consensus 17 ~~v~k~G~L~~~k~g~~~k~WkkRwfVL~-~~~L~yyk~~~~~~~~~~~~~~~~l~~i~l~~~~~v~~~~~k~~~f~i~~ 95 (468)
..|+|+|||+ |+|+..|.||+|||||+ ++.|+|||++++..+.+. +++..+.+..|..+.....++++|.+..
T Consensus 4 ~~v~keG~L~--K~g~~~k~Wk~r~fvL~~~~~l~yyk~~~~~~~~~~----i~l~~~~~~~~~~~~~~~~~~~~f~I~~ 77 (446)
T 4ejn_A 4 VAIVKEGWLH--KRGEYIKTWRPRYFLLKNDGTFIGYKERPQDVDQRE----APLNNFSVAQCQLMKTERPRPNTFIIRC 77 (446)
T ss_dssp CCEEEEEEEE--EEETTTTEEEEEEEEEETTSBEEEESSCC-----------CCCGGGBCTTCEEEEECSSSTTEEEEEE
T ss_pred ceEEEEeeEE--eeccccccccceEEEEeeCCEEEEEecCCCCCccCc----ccccCccccceeecCCCCCCCceeEEEc
Confidence 4799999775 77888999999999997 899999999887664331 2344555544443344455567887753
Q ss_pred -cCCCCcEEEEEeCCHHHHHHHHHHHHHHHHh
Q 012222 96 -DGRDGRAFTLKAETSEDLYEWKTALELALAQ 126 (468)
Q Consensus 96 -~~~~~r~y~l~A~s~~e~~~Wi~aI~~ai~~ 126 (468)
........+|++++.+++.+|+.||+.++..
T Consensus 78 ~~~~~~~~r~~~~~~~ee~e~W~~ai~~~i~~ 109 (446)
T 4ejn_A 78 LQWTTVIERTFHVETPEEREEWTTAIQTVADG 109 (446)
T ss_dssp EETTEEEEEEEECSSHHHHHHHHHHHHHHCCC
T ss_pred CCCceeeeeEEecCCHHHHHHHHHHHHhhhhh
Confidence 1111223389999999999999999999864
No 81
>3hk0_A Growth factor receptor-bound protein 10; GRB10, RA, PH, RAS-associating, pleckstrin-homology, adapter phosphoprotein, SH2 domain; 2.60A {Homo sapiens}
Probab=99.29 E-value=1.3e-11 Score=117.03 Aligned_cols=107 Identities=21% Similarity=0.202 Sum_probs=71.4
Q ss_pred CceEEEeeeeeeecCCCcCCCeeEEEEEeCCeEEEEecCCCCCCCCCCccccccccEEecCCcc--eeecCCCceeEEEE
Q 012222 17 NTVFKSGPLFISSKGIGWKSWKKRWFILTRTSLVFFKNDPSALPQRGGEVNLTLGGIDLNNSGS--VVVREDKKLLTVLF 94 (468)
Q Consensus 17 ~~v~k~G~L~~~k~g~~~k~WkkRwfVL~~~~L~yyk~~~~~~~~~~~~~~~~l~~i~l~~~~~--v~~~~~k~~~f~i~ 94 (468)
....++||||++. ...|+|+||||+|+++.|+||+..+...++ .-..-+.+..+++-.... -..+..+++||.|.
T Consensus 130 ~~P~~~G~L~~ke--~~~K~WkkRyfvLr~sgLy~~~k~~sk~~r-~l~~~~~L~~~~vy~~~~~kKk~kaPt~~~F~ik 206 (256)
T 3hk0_A 130 SSPEIQGFLHVKE--LGKKSWKKLYVCLRRSGLYCSTKGTSAAPR-HLQLLADLEDSNIFSLIAGRKQYNAPTDHGLCIK 206 (256)
T ss_dssp SCEEEEEEEEEEC--TTSSCEEEEEEEEETTEEEEESSTTCCCGG-GEEEEECCTTEEEEEESSTHHHHCCSSSEEEEEE
T ss_pred CCCcceeEEEEec--CCCCcceEEEEEEeCCEEEEEecCCCCccc-cceEEEEcCCCEEEEecccccccCCCCCCEEEEE
Confidence 4568999998544 346899999999999999999876543321 111112344444432211 11223456899987
Q ss_pred ecCC---CCcEEEEEeCCHHHHHHHHHHHHHHHHh
Q 012222 95 PDGR---DGRAFTLKAETSEDLYEWKTALELALAQ 126 (468)
Q Consensus 95 ~~~~---~~r~y~l~A~s~~e~~~Wi~aI~~ai~~ 126 (468)
+... ....++|+|++++++.+|++||+.|...
T Consensus 207 ~~k~~~~~~~~~~lcaede~~~~~W~~aIr~ak~g 241 (256)
T 3hk0_A 207 PNKVRNETKELRLLCAEDEQTRTSWMTAFRLLKYG 241 (256)
T ss_dssp ETTCSSCCTTCEEEEESSHHHHHHHHHHHHHHHHT
T ss_pred cccccCCCceEEEEEeCCHHHHHHHHHHHHHHHhh
Confidence 6332 1347999999999999999999998753
No 82
>4gmv_A RAS-associated and pleckstrin homology domains-CO protein 1; RA-PH, coiled-coil region, RAS-association domain, pleckstri homology domain; 2.40A {Homo sapiens} PDB: 4gn1_A
Probab=99.25 E-value=2e-11 Score=117.03 Aligned_cols=107 Identities=18% Similarity=0.268 Sum_probs=66.8
Q ss_pred CceEEEeeeeeeecCCCcCCCeeEEEEEeCCeEEEEecCCCCCCCCCCccccccccEEecCCcce--eecCCCceeEEEE
Q 012222 17 NTVFKSGPLFISSKGIGWKSWKKRWFILTRTSLVFFKNDPSALPQRGGEVNLTLGGIDLNNSGSV--VVREDKKLLTVLF 94 (468)
Q Consensus 17 ~~v~k~G~L~~~k~g~~~k~WkkRwfVL~~~~L~yyk~~~~~~~~~~~~~~~~l~~i~l~~~~~v--~~~~~k~~~f~i~ 94 (468)
..+.++||||++. ...++|+||||||+++.|+||+..+...++. -..-+.+.++++-..... ..+..+.+||.|.
T Consensus 156 ~~pe~~G~L~~k~--~~~k~WkkRyfvLr~sgLyy~~K~~sk~~r~-l~~l~~L~~~~VY~~~~~kkk~kaPt~~~F~ik 232 (281)
T 4gmv_A 156 TVPEIEGVLWLKD--DGKKSWKKRYFLLRASGIYYVPKGKAKVSRD-LVCFLQLDHVNVYYGQDYRNKYKAPTDYCLVLK 232 (281)
T ss_dssp CCCCCEEEEEEEC--TTSSCEEEEEEEECSSCEEEC---------C-CEEEECGGGCEEEEESSHHHHTCCSCSCEEEEE
T ss_pred CCCccEEEEEEEC--CCCCCCeEEEEEEeCCEEEEEeCCCCCcccc-ceEEEEcCCcEEEEecccccccCCCCCcEEEEe
Confidence 3457999887444 3458999999999999999998765433221 111123334333222111 1234567899987
Q ss_pred ecC---CCCcEEEEEeCCHHHHHHHHHHHHHHHHh
Q 012222 95 PDG---RDGRAFTLKAETSEDLYEWKTALELALAQ 126 (468)
Q Consensus 95 ~~~---~~~r~y~l~A~s~~e~~~Wi~aI~~ai~~ 126 (468)
+.. ....+++|+|++++++..|+.||+.|...
T Consensus 233 ~~~~~~~~~~~~~~caede~~~~~Wv~Air~ak~g 267 (281)
T 4gmv_A 233 HPQIQKKSQYIKYLCCDDVRTLHQWVNGIRIAKYG 267 (281)
T ss_dssp CTTCCSCCTTCEEEECSSHHHHHHHHHHHHHHHHT
T ss_pred cCccCCCCCceEEEEeCCHHHHHHHHHHHHHHhhC
Confidence 532 23468999999999999999999998753
No 83
>4f7h_A Fermitin family homolog 2; beta-barrel, membrane binding, integrin activation, cytoplas membrane, cell adhesion; HET: SRT; 1.90A {Homo sapiens} PDB: 2lko_A*
Probab=99.21 E-value=5.1e-11 Score=102.96 Aligned_cols=103 Identities=16% Similarity=0.215 Sum_probs=70.7
Q ss_pred ceEEEeeeeee-ecCCCcCCCeeEEEEEeCCeEEEEecCCCCCCCCCCccccccccEEecCCcceeecCCCceeEEEEe-
Q 012222 18 TVFKSGPLFIS-SKGIGWKSWKKRWFILTRTSLVFFKNDPSALPQRGGEVNLTLGGIDLNNSGSVVVREDKKLLTVLFP- 95 (468)
Q Consensus 18 ~v~k~G~L~~~-k~g~~~k~WkkRwfVL~~~~L~yyk~~~~~~~~~~~~~~~~l~~i~l~~~~~v~~~~~k~~~f~i~~- 95 (468)
.+...+||-.. -++...|+||+||||++++.|+|||++.+.. +.+...+.|.|+.+.+... ....+|++.+..
T Consensus 46 iPeL~dyLk~~~pk~~tLKgyKryWFv~kd~~LsyYKskEe~~--geP~~~I~LrGCEVtpDVn---va~~Kf~IkL~vP 120 (173)
T 4f7h_A 46 IPELADYIKVFKPKKLTLKGYKQYWCTFKDTSISCYKSKEESS--GTPAHQMNLRGCEVTPDVN---ISGQKFNIKLLIP 120 (173)
T ss_dssp TTCEEEEEEEECCBTTBCCCCEEEEEEEETTEEEEESCGGGCS--SCCSEEEECTTCEEEEEEE---TTTTEEEEEEEEE
T ss_pred ChhhHhHHHhhcchhcccccceeEEEEEeCCEEEEEcCHhHhc--CCCceEEecCceEEecccc---ccccceeEEEecc
Confidence 34577988433 3455689999999999999999999987754 2322333444444443211 134555554433
Q ss_pred cCCCCcEEEEEeCCHHHHHHHHHHHHHHHH
Q 012222 96 DGRDGRAFTLKAETSEDLYEWKTALELALA 125 (468)
Q Consensus 96 ~~~~~r~y~l~A~s~~e~~~Wi~aI~~ai~ 125 (468)
...+.+.++|.|+|+.++.+||.|++-|.+
T Consensus 121 ~~~gm~e~~Lrcd~E~qya~WMAAcrLAsk 150 (173)
T 4f7h_A 121 VAEGMNEIWLRCDNEKQYAHWMAACRLASK 150 (173)
T ss_dssp ETTEEEEEEEEESSHHHHHHHHHHHHHHHT
T ss_pred CCCCcceeeeecCCHHHHHHHHHHhhhhcc
Confidence 233457899999999999999999998875
No 84
>4bbk_A Kindlin-1, fermitin family homolog 1; PH domain, cell adhesion; 2.10A {Mus musculus}
Probab=99.20 E-value=5.6e-11 Score=101.57 Aligned_cols=103 Identities=22% Similarity=0.279 Sum_probs=66.8
Q ss_pred ceEEEeeeeee-ecCCCcCCCeeEEEEEeCCeEEEEecCCCCCCCCCCccccccccEEecCCcceeecCCCceeEEEEec
Q 012222 18 TVFKSGPLFIS-SKGIGWKSWKKRWFILTRTSLVFFKNDPSALPQRGGEVNLTLGGIDLNNSGSVVVREDKKLLTVLFPD 96 (468)
Q Consensus 18 ~v~k~G~L~~~-k~g~~~k~WkkRwfVL~~~~L~yyk~~~~~~~~~~~~~~~~l~~i~l~~~~~v~~~~~k~~~f~i~~~ 96 (468)
....+|||-+. -++...|+||+||||++++.|.|||++.+.. +.+...+.|.++.+.+.. .....++.+.+...
T Consensus 25 iPeL~dyLk~~~pkrltLKgfKryWfv~kDt~LsyYKSkEe~~--geP~~~inLrGCEVtPDV---nva~~Kf~ikL~ip 99 (165)
T 4bbk_A 25 IPKLADYLKLFRPKKLMLKACKQYWFVFKDTSIAYFKNKELEQ--GEPIEKLNLRGCEIVPDV---NVSGRKFGIKLLIP 99 (165)
T ss_dssp -CCEEEEEEEEC-------CCEEEEEEEETTEEEEESSGGGTT--SCCSEEEECTTCEEEEEE---ETTTTEEEEEEEEE
T ss_pred ChhhHhHHHhhcccccccccceeEEEEEeCCEEEEEcCHHHhc--CCCceEEecCccEEeccc---ccccceeeEEEecC
Confidence 44577988543 3455689999999999999999999988754 333333344444443211 11455666666443
Q ss_pred CCCC-cEEEEEeCCHHHHHHHHHHHHHHHH
Q 012222 97 GRDG-RAFTLKAETSEDLYEWKTALELALA 125 (468)
Q Consensus 97 ~~~~-r~y~l~A~s~~e~~~Wi~aI~~ai~ 125 (468)
...| ..++|.|+|+.+..+|+.|++-|..
T Consensus 100 ~~~gm~e~~LrcdsE~QYa~WMAAcrLAsk 129 (165)
T 4bbk_A 100 VADGMNEVYLRCDHEDQYARWMAACILASK 129 (165)
T ss_dssp ETTEEEEEEEEESSHHHHHHHHHHHHHHHT
T ss_pred CCCcceeeeeecCCHHHHHHHHHHhhhccc
Confidence 3434 5899999999999999999998875
No 85
>1w1g_A HPDK1, 3-phosphoinositide dependent protein kinase-1; transferase, PKB, pleckstrin homology domain, inositol phosphate, signal transduction; HET: 4PT; 1.45A {Homo sapiens} SCOP: b.55.1.1 PDB: 1w1d_A* 1w1h_A 2vki_A
Probab=99.16 E-value=1e-10 Score=100.50 Aligned_cols=93 Identities=19% Similarity=0.302 Sum_probs=71.7
Q ss_pred CCCceEEEeeeeeeecCCCcCCCeeEEEEEeCCeEEEEecCCCCCCCCCCccccccccEEecCCcceeecCCCceeEEEE
Q 012222 15 ASNTVFKSGPLFISSKGIGWKSWKKRWFILTRTSLVFFKNDPSALPQRGGEVNLTLGGIDLNNSGSVVVREDKKLLTVLF 94 (468)
Q Consensus 15 ~~~~v~k~G~L~~~k~g~~~k~WkkRwfVL~~~~L~yyk~~~~~~~~~~~~~~~~l~~i~l~~~~~v~~~~~k~~~f~i~ 94 (468)
....|+++|+|++++ |. .|++|||+|+++...||-++.... ..|.|.++....|....++ .+++.+
T Consensus 48 ~ge~Ilk~G~v~Krk-Gl---~~kkR~liLT~~PrL~Yvdp~~~~---------~KGeIpls~~l~ve~k~~~-~F~I~T 113 (151)
T 1w1g_A 48 ENNLILKMGPVDKRK-GL---FARRRQLLLTEGPHLYYVDPVNKV---------LKGEIPWSQELRPEAKNFK-TFFVHT 113 (151)
T ss_dssp TTCCEEEEEEEEEEE-TT---EEEEEEEEEETTTEEEEEETTTTE---------EEEEECCCTTCEEEESSSS-EEEEEE
T ss_pred CCCcEEEEEEEEecc-cC---cceeEEEEEcCCceEEEEcCcccc---------ccceEecCCCeeEEEcCCC-EEEEEC
Confidence 356899999887543 32 399999999999999999876543 5677888887777665544 233334
Q ss_pred ecCCCCcEEEEEeCCHHHHHHHHHHHHHHHHh
Q 012222 95 PDGRDGRAFTLKAETSEDLYEWKTALELALAQ 126 (468)
Q Consensus 95 ~~~~~~r~y~l~A~s~~e~~~Wi~aI~~ai~~ 126 (468)
+ +|+|+|.+. ...+++|++||+.++..
T Consensus 114 p----~RtY~~~d~-~~~AqeWv~aI~~~~~~ 140 (151)
T 1w1g_A 114 P----NRTYYLMDP-SGNAHKWCRKIQEVWRQ 140 (151)
T ss_dssp T----TEEEEEECT-TSCHHHHHHHHHHHHHH
T ss_pred C----CceEEEEcC-ccCHHHHHHHHHHHHHH
Confidence 4 699999997 78999999999999975
No 86
>2coa_A Protein kinase C, D2 type; protein kinase D2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.91 E-value=6.1e-09 Score=86.10 Aligned_cols=98 Identities=16% Similarity=0.200 Sum_probs=75.7
Q ss_pred CCCCceEEEeeeeeeecCCCcCCCeeEEEEEeCCeEEEEecCCCCCCCCCCccccccccEEecCCcceeecC--------
Q 012222 14 GASNTVFKSGPLFISSKGIGWKSWKKRWFILTRTSLVFFKNDPSALPQRGGEVNLTLGGIDLNNSGSVVVRE-------- 85 (468)
Q Consensus 14 ~~~~~v~k~G~L~~~k~g~~~k~WkkRwfVL~~~~L~yyk~~~~~~~~~~~~~~~~l~~i~l~~~~~v~~~~-------- 85 (468)
+.++.++|+||+ -.-+...+.|||+|++|...++.+|+++...+ ....|.|..+-.|....
T Consensus 3 ~~~s~vlkeGW~--VH~t~~d~~rKRHYWrLD~K~Itlf~~e~~~~---------~ykeIpL~eIl~v~~~~~~~~l~~~ 71 (125)
T 2coa_A 3 SGSSGTLREGWV--VHYSNKDTLRKRHYWRLDCKCITLFQNNTTNR---------YYKEIPLSEILTVESAQNFSLVPPG 71 (125)
T ss_dssp CCCCSCSEEEEE--EECCSSSCCCEEEEEEECSSEEEEESSSSCSS---------CSEEEETTTCCEEEESCCCSSSCTT
T ss_pred CCCCceeecceE--EEEccCCccccceeeEecCCeEEEEecCCCCc---------eeeeeehhHeecccccccccccCCC
Confidence 346789999965 46677788999999999999999999987766 45567777766665432
Q ss_pred CCceeEEEEecCCCCcEEEEEeC---C--------HHHHHHHHHHHHHHHH
Q 012222 86 DKKLLTVLFPDGRDGRAFTLKAE---T--------SEDLYEWKTALELALA 125 (468)
Q Consensus 86 ~k~~~f~i~~~~~~~r~y~l~A~---s--------~~e~~~Wi~aI~~ai~ 125 (468)
...+||.+.. ..++||++++ . .+.+..|..||++|+.
T Consensus 72 ~~~hcFEi~T---~~~~yyVg~~~~~~p~~~sg~g~~~a~~W~~aIrqALm 119 (125)
T 2coa_A 72 TNPHCFEIVT---ANATYFVGEMPGGTPGGPSGQGAEAARGWETAIRQALM 119 (125)
T ss_dssp SCCEEEEEEC---SSCCCCEECCSCCCSSSCCCCCSHHHHHHHHHHHHHGG
T ss_pred CCCceEEEEe---CCeEEEEccCCCCCCCCcCccccHHHHHHHHHHHhhcc
Confidence 2348898864 4688999984 1 2569999999999985
No 87
>2d9z_A Protein kinase C, NU type; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.84 E-value=2.6e-08 Score=82.52 Aligned_cols=99 Identities=15% Similarity=0.192 Sum_probs=72.9
Q ss_pred CCCCceEEEeeeeeeecCCCcCCCeeEEEEEeCCeEEEEecCCCCCCCCCCccccccccEEecCCcceeec--------C
Q 012222 14 GASNTVFKSGPLFISSKGIGWKSWKKRWFILTRTSLVFFKNDPSALPQRGGEVNLTLGGIDLNNSGSVVVR--------E 85 (468)
Q Consensus 14 ~~~~~v~k~G~L~~~k~g~~~k~WkkRwfVL~~~~L~yyk~~~~~~~~~~~~~~~~l~~i~l~~~~~v~~~--------~ 85 (468)
+.++.++|+||+- .-+...+.|||+|++|...+|.+|+++...++ ...|.|..+-.|... .
T Consensus 3 ~~~s~vlkeGWmV--H~t~~d~~rKRHYWrLD~K~Itlf~~e~~~k~---------ykeIpLseIL~v~~~~~~~~~~~~ 71 (129)
T 2d9z_A 3 SGSSGMVKEGWMV--HYTSRDNLRKRHYWRLDSKCLTLFQNESGSKY---------YKEIPLSEILRISSPRDFTNISQG 71 (129)
T ss_dssp SCCTTSEEEEEEE--EEESSCCCCEEEEEEEESSCEEEESCSSCCSC---------CCEECTTTCCEECCTTCCCCSSSC
T ss_pred CCCCceeecceEE--EEccCCccccceeeEecCCeEEEEecCCCCce---------eceeeHHHhcccccccCccccCCC
Confidence 3467899999764 44445678999999999999999999877653 334555554444332 2
Q ss_pred CCceeEEEEecCCCCcEEEEEeCC---------------HHHHHHHHHHHHHHHHh
Q 012222 86 DKKLLTVLFPDGRDGRAFTLKAET---------------SEDLYEWKTALELALAQ 126 (468)
Q Consensus 86 ~k~~~f~i~~~~~~~r~y~l~A~s---------------~~e~~~Wi~aI~~ai~~ 126 (468)
...+||.+.. ...+|+..++. .+.++.|..||++|+.-
T Consensus 72 ~~phcFEi~T---~~~~y~Vge~~~~~~~~~~~~~sg~g~~~a~~We~aIrqALmP 124 (129)
T 2d9z_A 72 SNPHCFEIIT---DTMVYFVGENNGDSSHNPVLAATGVGLDVAQSWEKAIRQALMS 124 (129)
T ss_dssp SCCCSEEEEC---SSCEEEECBCCSCCSCCTTTTTTTCBHHHHHHHHHHHHHHHHH
T ss_pred CCCceEEEEE---CCEEEEEccCCCCCCCCccccccccchHHHHHHHHHHHHhccC
Confidence 2348998864 46899998853 68999999999999963
No 88
>1v5m_A SH2 and PH domain-containing adapter protein APS; adaptor protein, pleckstrin homology domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=98.14 E-value=4.5e-05 Score=63.33 Aligned_cols=104 Identities=19% Similarity=0.309 Sum_probs=66.9
Q ss_pred CceEEEeee-eeee-----cCCCcCCCeeEEEEEeC----C--eEEEEecCCCCCCCCCCccccccccEEecCCcceeec
Q 012222 17 NTVFKSGPL-FISS-----KGIGWKSWKKRWFILTR----T--SLVFFKNDPSALPQRGGEVNLTLGGIDLNNSGSVVVR 84 (468)
Q Consensus 17 ~~v~k~G~L-~~~k-----~g~~~k~WkkRwfVL~~----~--~L~yyk~~~~~~~~~~~~~~~~l~~i~l~~~~~v~~~ 84 (468)
-.+.|+|.| |... ..+....|+|+|+||+. + .|-||..++..+|+.+-... ....+..++...-
T Consensus 16 ~e~~kEG~l~~~~~~~~~~~~~~~~~W~k~RLvL~k~g~G~~y~LEfy~PPkssKpK~~i~cs---~I~EVR~tt~LEm- 91 (136)
T 1v5m_A 16 VDIQREGALRFMVADDAASGPGGTAQWQKCRLLLRRAVAGERFRLEFFVPPKASRPKVSIPLS---AIIEVRTTMPLEM- 91 (136)
T ss_dssp CSCCEEEEEEEEECSCCCSSSCCSCCCEEEEEEEEECSSSCCEEEEEESSTTSSSCSSCEETT---TCCBCCCCCCSSS-
T ss_pred ceeeeeeeeeeecccccccccCcccchhheeeEEEEccCCCceEEEEecCCcccCCccccchh---hhhhhhhcccccc-
Confidence 367999977 3222 12346789999999953 2 57888777777655431111 1122333322221
Q ss_pred CCCceeEEEEecCCCCcEEEEEeCCHHHHHHHHHHHHHHHHh
Q 012222 85 EDKKLLTVLFPDGRDGRAFTLKAETSEDLYEWKTALELALAQ 126 (468)
Q Consensus 85 ~~k~~~f~i~~~~~~~r~y~l~A~s~~e~~~Wi~aI~~ai~~ 126 (468)
.++-+.|++. ..++..|+|.|.++.+++.|+..|+..+..
T Consensus 92 PD~~nTFVlK--~~n~~eyi~ea~d~~q~~sWla~Ir~C~~~ 131 (136)
T 1v5m_A 92 PEKDNTFVLK--VENGAEYILETIDSLQKHSWVADIQGCVDS 131 (136)
T ss_dssp CCCTTEECCB--CTTSCBEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred CCccceEEEE--ecCCcEEEEEcCCHHHHHHHHHHHHhhcCC
Confidence 2344566654 455668999999999999999999998864
No 89
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Probab=97.95 E-value=7.7e-06 Score=76.46 Aligned_cols=39 Identities=26% Similarity=0.629 Sum_probs=33.3
Q ss_pred ceEEEeeeeeeecCCCcCCCeeEEEEEeCCeEEEEecCCCC
Q 012222 18 TVFKSGPLFISSKGIGWKSWKKRWFILTRTSLVFFKNDPSA 58 (468)
Q Consensus 18 ~v~k~G~L~~~k~g~~~k~WkkRwfVL~~~~L~yyk~~~~~ 58 (468)
.+.++|||+ |+|+..++|+||||||+++.|.||+...+.
T Consensus 20 ~~~~~g~l~--~~~~~~~~w~~rw~vl~~~~~~~~~~~~~~ 58 (228)
T 3tfm_A 20 SPYFHSFLY--MNGGLMNSWKRRWCVLKDETFLWFRSKQEA 58 (228)
T ss_dssp -CCEEEEEE--ECCTTTCCCEEEEEEEETTEEEEESSCCCS
T ss_pred CCceEEEEe--ecCcccccceEEEEEEeCCEEEEeccCCCc
Confidence 568999665 778899999999999999999999976553
No 90
>3ml4_A Protein DOK-7; tyrosine phosphorylation, adapter protein, dimerization, SIG protein; HET: PTR; 2.60A {Mus musculus}
Probab=97.74 E-value=8.3e-05 Score=67.61 Aligned_cols=98 Identities=17% Similarity=0.333 Sum_probs=60.0
Q ss_pred CceEEEeeeeeeecCCCcCCCeeEEEEEeCC-------eEEEEecCCCCCCCCCCccccccccEEecCCccee---ecCC
Q 012222 17 NTVFKSGPLFISSKGIGWKSWKKRWFILTRT-------SLVFFKNDPSALPQRGGEVNLTLGGIDLNNSGSVV---VRED 86 (468)
Q Consensus 17 ~~v~k~G~L~~~k~g~~~k~WkkRwfVL~~~-------~L~yyk~~~~~~~~~~~~~~~~l~~i~l~~~~~v~---~~~~ 86 (468)
..++.||+. +-+. .|.||+||+||+.- .|..||+.++......... .+.|.+..-+. .-+.
T Consensus 7 ~~~v~eg~v--k~r~--~KkWk~rw~vlrk~s~~adcl~L~vYkd~~dr~k~~~~Ka-----slsL~~~~GlE~g~~ldk 77 (224)
T 3ml4_A 7 EAALVEGQV--KLRD--GKKWKSRWLVLRKPSPVADCLLMLVYKDKCERSKGLRERS-----SLTLEDICGLEPALPYEG 77 (224)
T ss_dssp CCCSEEEEE--EEC-----CCEEEEEEEECSSTTSSCEEEEEESSSHHHHSCCCCSE-----EEEECCEEEEEEEEEETT
T ss_pred cceeEEEee--eeec--CCceeeEEEEEEcCCCchheEEEEEEcChhhhhcCCcccc-----eeehHHhcCccccccccC
Confidence 356889954 3332 35899999999751 6899999877432222222 34444333222 1123
Q ss_pred CceeEEEEecCCCCcEEEEEeCCHHHHHHHHHHHHHHHHh
Q 012222 87 KKLLTVLFPDGRDGRAFTLKAETSEDLYEWKTALELALAQ 126 (468)
Q Consensus 87 k~~~f~i~~~~~~~r~y~l~A~s~~e~~~Wi~aI~~ai~~ 126 (468)
+.+...| ... ..++.|.+++.+.+.+|-..|+..+..
T Consensus 78 ~s~TlAI--Ic~-d~~~vLAFds~e~l~~W~~~l~~slGe 114 (224)
T 3ml4_A 78 LAHTLAI--ICL-SQAVMLGFDSHEAMCAWDTRIRYALGE 114 (224)
T ss_dssp EEEEEEE--EES-SCEEEEECSSHHHHHHHHHHHHHHTSS
T ss_pred cccEEEE--Eec-CcEEEEEeCCHHHHHHHHHHHhhccCC
Confidence 3333333 223 457899999999999999999986643
No 91
>2lg1_A A-kinase anchor protein 13; metal binding protein; NMR {Homo sapiens}
Probab=97.73 E-value=9.9e-05 Score=66.49 Aligned_cols=108 Identities=15% Similarity=0.167 Sum_probs=65.4
Q ss_pred CceEEEeeeeeeecCCCcCCCeeEEEEEeCCeEEEEecCCCCCCCCCCccccccccEEecCCcceeecCCCceeEEEEec
Q 012222 17 NTVFKSGPLFISSKGIGWKSWKKRWFILTRTSLVFFKNDPSALPQRGGEVNLTLGGIDLNNSGSVVVREDKKLLTVLFPD 96 (468)
Q Consensus 17 ~~v~k~G~L~~~k~g~~~k~WkkRwfVL~~~~L~yyk~~~~~~~~~~~~~~~~l~~i~l~~~~~v~~~~~k~~~f~i~~~ 96 (468)
...+++|.|.++.. .++|+.+|++|=+..|.|-+...+..--.... . .-..+.+..........+.+.+|.+...
T Consensus 69 R~Ll~eG~L~~k~~---~~~~~d~~~fLf~D~Ll~~~~~~~ky~~~~~~-~-~~pvi~L~~~~vre~a~d~~~~fli~~~ 143 (185)
T 2lg1_A 69 KKLVRDGSVFLKNA---AGRLKEVQAVLLTDILVFLQEKDQKYIFASLD-Q-KSTVISLKKLIVREVAHEEKGLFLISMG 143 (185)
T ss_dssp SCEEEEEEEEEECT---TCCEEEEEEEEESSEEECCEEETTEEECCCCS-S-SCSEEESSSCEEECCSSCSSEEEEECCS
T ss_pred CceeeeceEEEecc---CCCeeeEEEEeecCEEEEEEecCCEEEEEccc-C-CCCeEeecceEEeccCCCCCeEEEEEec
Confidence 46899998853322 23689999999888887775422111000000 0 0011233322111112345666777654
Q ss_pred CCCCcEEEEEeCCHHHHHHHHHHHHHHHHhCCc
Q 012222 97 GRDGRAFTLKAETSEDLYEWKTALELALAQAPS 129 (468)
Q Consensus 97 ~~~~r~y~l~A~s~~e~~~Wi~aI~~ai~~~p~ 129 (468)
....+.|.|+|.|.+|++.|+++|+.|+...|+
T Consensus 144 ~~g~~~yel~a~s~~er~~W~~~I~~Ai~~~~~ 176 (185)
T 2lg1_A 144 MTDPEMVEVHASSKEERNSWIQIIQDTINTLNR 176 (185)
T ss_dssp SSCCCCEEEECSSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEEcCCHHHHHHHHHHHHHHHHhCCh
Confidence 334578999999999999999999999987643
No 92
>1v61_A RAC/CDC42 guanine nucleotide exchange factor (GEF) 6; pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=97.40 E-value=0.0013 Score=55.52 Aligned_cols=86 Identities=15% Similarity=0.268 Sum_probs=59.6
Q ss_pred CeeEEEEEeCCeEEEEecCCCCCCCCCCccccccccEEecCCcceeecCCCceeEEEEecCCCCcEEEEEeCCHHHHHHH
Q 012222 37 WKKRWFILTRTSLVFFKNDPSALPQRGGEVNLTLGGIDLNNSGSVVVREDKKLLTVLFPDGRDGRAFTLKAETSEDLYEW 116 (468)
Q Consensus 37 WkkRwfVL~~~~L~yyk~~~~~~~~~~~~~~~~l~~i~l~~~~~v~~~~~k~~~f~i~~~~~~~r~y~l~A~s~~e~~~W 116 (468)
=+.|||+|=++.|.|.+...... .-.-...+++.++.+.... ...+.+++|.|.. +...++.+.|.|.+|+++|
T Consensus 44 ~~eR~l~LF~~~Ll~~s~~~~~~-~f~~kgklPL~g~~V~~~e---d~~~~~~aFeI~g--~~~~~i~v~~~s~eE~~~W 117 (132)
T 1v61_A 44 KEERYFLLFSSVLIMLSASPRMS-GFMYQGKIPIAGMVVNRLD---EIEGSDCMFEITG--STVERIVVHCNNNQDFQEW 117 (132)
T ss_dssp CCEEEEEECSSCEEEEECSSSSS-CCEEEEEECTTTCBCSTTC---SSSSSCCCEEEEC--SSSCEEEECCCCSHHHHHH
T ss_pred ceEEEEEEcCCeEEEEEecCCCc-eEEEEEEEecceeEEEecc---ccccCccEEEEec--CCCceEEEEeCCHHHHHHH
Confidence 46899999999998887643210 0000122456666655432 1234678888874 4457899999999999999
Q ss_pred HHHHHHHHHhCC
Q 012222 117 KTALELALAQAP 128 (468)
Q Consensus 117 i~aI~~ai~~~p 128 (468)
+.+|+.++..||
T Consensus 118 l~~L~~~i~~~~ 129 (132)
T 1v61_A 118 MEQLNRLTKSGP 129 (132)
T ss_dssp HHHHHHHHTTSC
T ss_pred HHHHHHHHhhcc
Confidence 999999998776
No 93
>3odw_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 3.20A {Homo sapiens} PDB: 3odx_A
Probab=97.30 E-value=0.001 Score=69.86 Aligned_cols=106 Identities=17% Similarity=0.215 Sum_probs=66.0
Q ss_pred CceEEEeeeeeeecCCCcCCCeeEEEEEeCCeEEEEecCCCCCCCCCC--------------ccccccccEEecCCccee
Q 012222 17 NTVFKSGPLFISSKGIGWKSWKKRWFILTRTSLVFFKNDPSALPQRGG--------------EVNLTLGGIDLNNSGSVV 82 (468)
Q Consensus 17 ~~v~k~G~L~~~k~g~~~k~WkkRwfVL~~~~L~yyk~~~~~~~~~~~--------------~~~~~l~~i~l~~~~~v~ 82 (468)
...+++|.|.... . ...|+.|||+|=.+.|.|.+...+...-+.. ...+++..+.+..
T Consensus 410 R~LI~eG~l~~~~--~-~~k~~~r~~fLF~D~LL~~k~k~~ky~~k~~~~~~~~~~d~k~~~~~~i~L~~l~v~e----- 481 (536)
T 3odw_A 410 KKLVHEGPLTWRV--T-KDKAVEVHVLLLDDLLLLLQRQDERLLLKSHSRTLTPTPDGKTMLRPVLRLTSAMTRE----- 481 (536)
T ss_dssp SCEEEEEEEEEES--C-C---CEEEEEEESSEEEEEEEETTEEECCCC------------CCCSEEEGGGEEEEE-----
T ss_pred ceeeeecceEEEe--c-CCCeeEEEEEEcCCEEEEEEEcCCeEEEeecccccccccccccccCceeecccceeec-----
Confidence 4689999774322 1 2368999999999999988754331110000 0012333333333
Q ss_pred ecCCCceeEEEEecCCCCcEEEEEeCCHHHHHHHHHHHHHHHHhCCcc
Q 012222 83 VREDKKLLTVLFPDGRDGRAFTLKAETSEDLYEWKTALELALAQAPSA 130 (468)
Q Consensus 83 ~~~~k~~~f~i~~~~~~~r~y~l~A~s~~e~~~Wi~aI~~ai~~~p~~ 130 (468)
...+.+.+|++.........|.|+|.|.+|++.|+++|++||..+..+
T Consensus 482 ~~~d~~~ffli~~~~~~~~~~~L~A~S~eEK~~W~~~I~~aI~~~~~~ 529 (536)
T 3odw_A 482 VATDHKAFYVLFTWDQEAQIYELVAQTVSERKNWCALITETAGSLKVP 529 (536)
T ss_dssp CTTCTTEEEEEEC---CCCEEEEECSSHHHHHHHHHHHHHHHHTSCCC
T ss_pred ccccCCceEEEecCCCCceEEEEECCCHHHHHHHHHHHHHHHHhCCCc
Confidence 223455566766544456789999999999999999999999987554
No 94
>3p6a_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 2.50A {Homo sapiens} PDB: 3odo_A
Probab=97.29 E-value=0.0013 Score=65.69 Aligned_cols=103 Identities=17% Similarity=0.228 Sum_probs=66.8
Q ss_pred CceEEEeeeeeeecCCCcCCCeeEEEEEeCCeEEEEecCCCCCCCCCC--------------ccccccccEEecCCccee
Q 012222 17 NTVFKSGPLFISSKGIGWKSWKKRWFILTRTSLVFFKNDPSALPQRGG--------------EVNLTLGGIDLNNSGSVV 82 (468)
Q Consensus 17 ~~v~k~G~L~~~k~g~~~k~WkkRwfVL~~~~L~yyk~~~~~~~~~~~--------------~~~~~l~~i~l~~~~~v~ 82 (468)
...+++|.|..... .+.|+.|||.|=++.|.|.+.......-+.. ...+++..+.+..
T Consensus 257 r~li~eG~l~~~~~---~~~~~~~~~fLF~d~Ll~~k~k~~k~~~k~~~~~~~~~~~~k~~~~~~i~l~~~~v~e----- 328 (377)
T 3p6a_A 257 KKLVHEGPLTWRVT---KDKAVEVHVLLLDDLLLLLQRQDERLLLKSHSRTLTPTPDGKTMLRPVLRLTSAMTRE----- 328 (377)
T ss_dssp SCEEEEEEEEEESS---SSCEEEEEEEEESSEEEEEEEETTEEECCCCCCC---------CSCSEEEGGGEEEEE-----
T ss_pred ceEEEECCcEEEec---CCCeEEEEEEeeCCEEEEEEEcCceeEEeecccccccCccccCCCCCeEechhhhccc-----
Confidence 46899997743221 2368999999999999988854321100000 0012333333332
Q ss_pred ecCCCceeEEEEecCCCCcEEEEEeCCHHHHHHHHHHHHHHHHhC
Q 012222 83 VREDKKLLTVLFPDGRDGRAFTLKAETSEDLYEWKTALELALAQA 127 (468)
Q Consensus 83 ~~~~k~~~f~i~~~~~~~r~y~l~A~s~~e~~~Wi~aI~~ai~~~ 127 (468)
...+.+.+|.+.........|.|+|.|.+|++.|++.|++|+...
T Consensus 329 ~~~~~~~~~~i~~~~~~~~~~~l~A~s~~ek~~W~~~I~~ai~~~ 373 (377)
T 3p6a_A 329 VATDHKAFYVLFTWDQEAQIYELVAQTVSERKNWCALITETAGSL 373 (377)
T ss_dssp CTTCTTEEEEEETTCTTCCEEEEECSSHHHHHHHHHHHHHHHHTC
T ss_pred cccccceeEEEecCCCCCeeEEEecCCHHHHHHHHHHHHHHHHhc
Confidence 223455667776544456789999999999999999999999854
No 95
>3t06_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; DH-PH RHOA complex, pdzrhogef, guanine nucleotide exchange F RHOA, signaling protein; 2.84A {Homo sapiens}
Probab=97.26 E-value=0.0017 Score=65.89 Aligned_cols=105 Identities=20% Similarity=0.223 Sum_probs=64.6
Q ss_pred CceEEEeeeeeeecCCCcCCCeeEEEEEeCCeEEEEecCCCCCCC--------C--CC----ccccccccEEecCCccee
Q 012222 17 NTVFKSGPLFISSKGIGWKSWKKRWFILTRTSLVFFKNDPSALPQ--------R--GG----EVNLTLGGIDLNNSGSVV 82 (468)
Q Consensus 17 ~~v~k~G~L~~~k~g~~~k~WkkRwfVL~~~~L~yyk~~~~~~~~--------~--~~----~~~~~l~~i~l~~~~~v~ 82 (468)
...+++|.|.+. +. .+.|+.||+.|=.+.|.|.+...+...- + .. ...+.+..+.+...
T Consensus 293 r~li~eG~l~~~--~~-~~~~~~~~~fLF~d~Ll~~k~~~~k~~~~~~~~~~~~~~~~~~~~k~~i~l~~~~v~~~---- 365 (418)
T 3t06_A 293 RKMIHEGPLTWR--IS-KDKTLDLHVLLLEDLLVLLQKQDEKLLLKCHSKTAVGSSDSKQTFSPVLKLNAVLIRSV---- 365 (418)
T ss_dssp SCEEEEEEEEEC--CB-TTBCCEEEEEEESSEEEEEEECSSCEECCC-------------CCCSEEEGGGEEEEEC----
T ss_pred ceeEEeceEEEE--eC-CCCeEEEEEEecCCEEEEEEEcCCceEEeecccccccCCCcccccCCceechhceeccc----
Confidence 468999977532 22 2358999999999999998864321100 0 00 01233444444321
Q ss_pred ecCCCceeEEEEecCCC-CcEEEEEeCCHHHHHHHHHHHHHHHHhCCc
Q 012222 83 VREDKKLLTVLFPDGRD-GRAFTLKAETSEDLYEWKTALELALAQAPS 129 (468)
Q Consensus 83 ~~~~k~~~f~i~~~~~~-~r~y~l~A~s~~e~~~Wi~aI~~ai~~~p~ 129 (468)
..+.+.++++.....+ .+.|.|+|.|.+|++.|+++|++++..++.
T Consensus 366 -~~~~~~f~l~~~~~~~~~~~~~l~A~s~~ek~~W~~~I~~a~~~~~~ 412 (418)
T 3t06_A 366 -ATDKRAFFIICTSKLGPPQIYELVALTSSDKNTWMELLEEAVRNAHH 412 (418)
T ss_dssp -SSCSSEEEEEECCSSSTTCEEEEECSSHHHHHHHHHHHHHHHHTC--
T ss_pred -cccCceEEEEecCCCCCceEEEEEcCCHHHHHHHHHHHHHHHhcCcc
Confidence 2334444454432222 268999999999999999999999987643
No 96
>1zc3_B Exocyst complex protein EXO84; exocytosis, small GTPase, GTP-binding protein,, signaling protein; HET: GNP; 2.00A {Rattus norvegicus} SCOP: b.55.1.1 PDB: 1zc4_B*
Probab=97.11 E-value=0.0047 Score=50.70 Aligned_cols=101 Identities=17% Similarity=0.075 Sum_probs=60.2
Q ss_pred CceEEEeeeeeeecCCCcCCCeeEEEEEeCCeEEEEecCCCCCCCCCCccccccccEEecCCcceeec--CCCceeEEEE
Q 012222 17 NTVFKSGPLFISSKGIGWKSWKKRWFILTRTSLVFFKNDPSALPQRGGEVNLTLGGIDLNNSGSVVVR--EDKKLLTVLF 94 (468)
Q Consensus 17 ~~v~k~G~L~~~k~g~~~k~WkkRwfVL~~~~L~yyk~~~~~~~~~~~~~~~~l~~i~l~~~~~v~~~--~~k~~~f~i~ 94 (468)
-..+++|.|..--.. ..+.=++++|.|=++.|.|-+-..... +.+. -...+.+....-+... ..-+.+|.|.
T Consensus 6 R~lv~eG~l~el~~~-~~k~~~~v~~FLfND~Ll~a~~~~~~~----~~~~-~~~~~~L~~~~v~d~~d~~~~~n~f~i~ 79 (113)
T 1zc3_B 6 QYLVYNGDLVEYEAD-HMAQLQRVHGFLMNDCLLVATWLPQRR----GMYR-YNALYPLDRLAVVNVKDNPPMKDMFKLL 79 (113)
T ss_dssp CCEEEEEEEEEEETT-TCCEEEEEEEEEESSEEEEEEEECCTT----SCEE-EEEEEETTTCEEEEECCBTTBSSEEEEE
T ss_pred eEEEEeCcEEEEccc-cCCCCccEEEEecCCEEEEEEEeccCc----ccEE-EEEEEEcccCEEEECCCCcccceEEEEE
Confidence 367899966422211 112235688999888888876643311 1111 1112333332211111 2345677766
Q ss_pred ecCCCCcEEEEEeCCHHHHHHHHHHHHHHHHh
Q 012222 95 PDGRDGRAFTLKAETSEDLYEWKTALELALAQ 126 (468)
Q Consensus 95 ~~~~~~r~y~l~A~s~~e~~~Wi~aI~~ai~~ 126 (468)
. ..+++.++|+|.+|..+|+.+|++|+..
T Consensus 80 ~---~~~s~~~~aes~~eK~~Wl~~~~~a~~~ 108 (113)
T 1zc3_B 80 M---FPESRIFQAENAKIKREWLEVLEETKRA 108 (113)
T ss_dssp E---TTEEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred e---CCceEEEEcCCHHHHHHHHHHHHHHHHH
Confidence 4 3568999999999999999999999863
No 97
>1xcg_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; X-RAY crystallography, regulation of RHOA GTPase, protein complex; 2.50A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 3kz1_A*
Probab=97.05 E-value=0.0062 Score=60.60 Aligned_cols=103 Identities=20% Similarity=0.255 Sum_probs=61.9
Q ss_pred CceEEEeeeeeeecCCCcCCCeeEEEEEeCCeEEEEecCCCCC--------CCCCC------ccccccccEEecCCccee
Q 012222 17 NTVFKSGPLFISSKGIGWKSWKKRWFILTRTSLVFFKNDPSAL--------PQRGG------EVNLTLGGIDLNNSGSVV 82 (468)
Q Consensus 17 ~~v~k~G~L~~~k~g~~~k~WkkRwfVL~~~~L~yyk~~~~~~--------~~~~~------~~~~~l~~i~l~~~~~v~ 82 (468)
...+++|.|.. +. ..+.++.||+.|=++.|.|.+...+.. ..+.. ...+++..+.+...
T Consensus 251 R~li~~G~l~~--~~-~~~~~~~~~~fLF~d~Ll~~k~~~~k~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~v~~~---- 323 (368)
T 1xcg_A 251 RKMIHEGPLTW--RI-SKDKTLDLHVLLLEDLLVLLQKQDEKLLLKCHSKTAVGSSDSKQTFSPVLKLNAVLIRSV---- 323 (368)
T ss_dssp SCEEEEEEEEE--CC-SSSCCCEEEEEEESSEEEEEEECSSCEECCC-------------CCCSEEEGGGEEEEEC----
T ss_pred ceEEeecceEe--ee-cCCCeeEEEEEcccccHHHhhcccccceeeeccccccCCCCcccCcCCceEccceeeecc----
Confidence 36899997742 22 234689999999999998887643210 00000 11122333333221
Q ss_pred ecCCCceeEEEEecCC-CCcEEEEEeCCHHHHHHHHHHHHHHHHhC
Q 012222 83 VREDKKLLTVLFPDGR-DGRAFTLKAETSEDLYEWKTALELALAQA 127 (468)
Q Consensus 83 ~~~~k~~~f~i~~~~~-~~r~y~l~A~s~~e~~~Wi~aI~~ai~~~ 127 (468)
..+++.++.+..... ..+.|.|+|.|.+++..|+++|+.|+.+|
T Consensus 324 -~~~~~~f~i~~~~~~g~~~~~~l~a~s~~ek~~W~~~i~~ai~~a 368 (368)
T 1xcg_A 324 -ATDKRAFFIICTSKLGPPQIYELVALTSSDKNTWMELLEEAVRNA 368 (368)
T ss_dssp -SSCSSEEEEEECCSSSTTCEEEEECSSHHHHHHHHHHHHHHHHHC
T ss_pred -cCCCceEEEEEecCCCCceEEEEEcCCHHHHHHHHHHHHHHHhcC
Confidence 123333334433221 23789999999999999999999999754
No 98
>1mai_A Phospholipase C delta-1; pleckstrin, inositol trisphosphate, signal transduction protein, hydrolase; HET: I3P; 1.90A {Rattus norvegicus} SCOP: b.55.1.1
Probab=96.90 E-value=0.0072 Score=50.96 Aligned_cols=40 Identities=13% Similarity=0.202 Sum_probs=31.8
Q ss_pred CceeEEEEecCCCCcEEEEEeCCHHHHHHHHHHHHHHHHhC
Q 012222 87 KKLLTVLFPDGRDGRAFTLKAETSEDLYEWKTALELALAQA 127 (468)
Q Consensus 87 k~~~f~i~~~~~~~r~y~l~A~s~~e~~~Wi~aI~~ai~~~ 127 (468)
...||.|...+ ..++..|.|.|.++++.|+..|+..+...
T Consensus 84 ~~~~FsIiy~~-~~k~LdlvA~s~~e~~~Wv~gL~~L~~~~ 123 (131)
T 1mai_A 84 EDRCFSIVFKD-QRNTLDLIAPSPADAQHWVQGLRKIIHHS 123 (131)
T ss_dssp GGGEEEEEESS-SCCCEEEECSSHHHHHHHHHHHHHHHC--
T ss_pred ccceEEEEECC-CCceEEEEeCCHHHHHHHHHHHHHHHHhh
Confidence 34688887643 24789999999999999999999988654
No 99
>3qwm_A Iqsec1, IQ motif and SEC7 domain-containing protein 1; structural genomics, structural genomics consortium, SGC; 2.39A {Homo sapiens}
Probab=96.82 E-value=0.012 Score=49.80 Aligned_cols=103 Identities=14% Similarity=0.009 Sum_probs=63.3
Q ss_pred ceEEEeeeeeee--cCCCcCCCeeEEEEEeCCeEEEEecCCCCCCCCCCcc----ccccccEEecCCcceeecCCCceeE
Q 012222 18 TVFKSGPLFISS--KGIGWKSWKKRWFILTRTSLVFFKNDPSALPQRGGEV----NLTLGGIDLNNSGSVVVREDKKLLT 91 (468)
Q Consensus 18 ~v~k~G~L~~~k--~g~~~k~WkkRwfVL~~~~L~yyk~~~~~~~~~~~~~----~~~l~~i~l~~~~~v~~~~~k~~~f 91 (468)
..++.+-||--- ....+++-+.|+|.|=++.|.|-|--+..+ .++.+ .+++.+..+.... ...-+++|
T Consensus 12 rlvc~~~l~ev~d~~K~~~kg~qqR~~FLFND~LL~TK~~~kkk--~~~~Y~vr~~~~L~gm~V~~~e----~e~~p~~~ 85 (140)
T 3qwm_A 12 RLVCYCRLFEVPDPNKPQKLGLHQREIFLFNDLLVVTKIFQKKK--NSVTYSFRQSFSLYGMQVLLFE----NQYYPNGI 85 (140)
T ss_dssp CEEEEEEEEECSCTTSCCCTTTTEEEEEEESSCEEEEECCC-----CCCCCCCEEEECCTTEEEEEEC----CSSCTTEE
T ss_pred eEEEEEeeeeeccCcccccccccceEEEEecchhhheeecccCC--CCCceEEEEEeeecceEEEccc----CCCCceEE
Confidence 467777665211 112244568999999999999987432221 11222 2344444443321 12345666
Q ss_pred EEEecCCC---CcEEEEEeCCHHHHHHHHHHHHHHHHh
Q 012222 92 VLFPDGRD---GRAFTLKAETSEDLYEWKTALELALAQ 126 (468)
Q Consensus 92 ~i~~~~~~---~r~y~l~A~s~~e~~~Wi~aI~~ai~~ 126 (468)
.+.....+ .++..|+|.|..|+.+|+++|+.+|..
T Consensus 86 ~l~s~~~G~~~k~~i~~~A~s~~ER~rwi~dL~esI~e 123 (140)
T 3qwm_A 86 RLTSSVPGADIKVLINFNAPNPQDRKKFTDDLRESIAE 123 (140)
T ss_dssp EEEECCTTSCCEEEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred EEEecCCCCcceEEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 66643322 378999999999999999999999964
No 100
>1txd_A RHO guanine nucleotide exchange factor 12; helical bundle (DH), beta sandwich (PH), signaling protein; 2.13A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1x86_A
Probab=96.81 E-value=0.0031 Score=63.28 Aligned_cols=107 Identities=18% Similarity=0.178 Sum_probs=64.3
Q ss_pred CceEEEeeeeeeecCCCcCCCeeEEEEEeCCeEEEEecCCCCCC----------CCCCccccccccEEecCCcceeecCC
Q 012222 17 NTVFKSGPLFISSKGIGWKSWKKRWFILTRTSLVFFKNDPSALP----------QRGGEVNLTLGGIDLNNSGSVVVRED 86 (468)
Q Consensus 17 ~~v~k~G~L~~~k~g~~~k~WkkRwfVL~~~~L~yyk~~~~~~~----------~~~~~~~~~l~~i~l~~~~~v~~~~~ 86 (468)
...+++|.|... .. .+.++.||+.|=++.|.+-+...+... ...+... -.+.+.+..+.......+
T Consensus 255 R~li~eG~l~~~--~~-~~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~l~~~~v~~~~~d 330 (385)
T 1txd_A 255 RKMIHEGPLVWK--VN-RDKTIDLYTLLLEDILVLLQKQDDRLVLRCHSKILASTADSKHT-FSPVIKLSTVLVRQVATD 330 (385)
T ss_dssp SCEEEEEEEEEE--SS-SSCBCCEEEEEESSEEEEEEEETTEEECCC-------------C-CCSEEEGGGEEEEECCC-
T ss_pred ceEEEECcEEEE--cC-CCCeEEEEEEecCCeeEEEEecCCeeEEeeccccccccCCCCcC-CCCceecccccccccccC
Confidence 368999977432 21 246889999999999988875432110 0000000 011233332211011133
Q ss_pred CceeEEEEecCCCCcEEEEEeCCHHHHHHHHHHHHHHHHhC
Q 012222 87 KKLLTVLFPDGRDGRAFTLKAETSEDLYEWKTALELALAQA 127 (468)
Q Consensus 87 k~~~f~i~~~~~~~r~y~l~A~s~~e~~~Wi~aI~~ai~~~ 127 (468)
.+.+|.+.....+.+.|.|+|.|.++.+.|+++|++++...
T Consensus 331 ~~~~f~i~~~~~~~~~~~l~a~s~~ek~~W~~~i~~~i~~~ 371 (385)
T 1txd_A 331 NKALFVISMSDNGAQIYELVAQTVSEKTVWQDLICRMAASV 371 (385)
T ss_dssp CCEEEEEEECSSCEEEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEEEcCCCceEEEEEcCCHHHHHHHHHHHHHHHHhc
Confidence 45567776544446789999999999999999999999865
No 101
>1nty_A Triple functional domain protein; DBL, pleckstrin, GEF, RHO, GTPase, guanine-nucleotide releas factor, phosphorylation, signaling protein; 1.70A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 2nz8_B 2kr9_A
Probab=96.79 E-value=0.0096 Score=57.81 Aligned_cols=107 Identities=14% Similarity=0.118 Sum_probs=63.4
Q ss_pred ceEEEeeeeeeecCCCcCCCeeEEEEEeCCeEEEEecCCCCCCCCCCccccccccEEecCCcceeecCCCceeEEEEec-
Q 012222 18 TVFKSGPLFISSKGIGWKSWKKRWFILTRTSLVFFKNDPSALPQRGGEVNLTLGGIDLNNSGSVVVREDKKLLTVLFPD- 96 (468)
Q Consensus 18 ~v~k~G~L~~~k~g~~~k~WkkRwfVL~~~~L~yyk~~~~~~~~~~~~~~~~l~~i~l~~~~~v~~~~~k~~~f~i~~~- 96 (468)
..+..|.+.........+..+.|++.|=.+.|.|-|..+... +...+. -.+.|.+....-.....+.+..|.+...
T Consensus 202 ~li~~~~~~~~~~~~~~~~~~~r~~fLF~d~Ll~~k~~~~~~--~~~~y~-~k~~i~l~~~~v~e~~~~~~~~F~i~~~~ 278 (311)
T 1nty_A 202 ELILQESFQVWDPKTLIRKGRERHLFLFEMSLVFSKEVKDSS--GRSKYL-YKSKLFTSELGVTEHVEGDPCKFALWVGR 278 (311)
T ss_dssp CEEEEEEEEEECSSSSSCCEEEEEEEEESSEEEEEEEEECTT--CCEEEE-EEEEEEGGGEEEECCCTTCTTEEEEEESS
T ss_pred CceeeeeEEEEcCcccccccceeEEEeccCeEEEEEeeccCC--CCceeE-EeeeeeccceeeEEccCCCCceEEEEeCC
Confidence 467777654332222245679999999999998887643211 111111 1122333322111111233456766542
Q ss_pred -CCCCcEEEEEeCCHHHHHHHHHHHHHHHHhC
Q 012222 97 -GRDGRAFTLKAETSEDLYEWKTALELALAQA 127 (468)
Q Consensus 97 -~~~~r~y~l~A~s~~e~~~Wi~aI~~ai~~~ 127 (468)
......|.|+|.|.+++..|+++|+.+|..+
T Consensus 279 ~~~~~~~~~l~a~s~~ek~~W~~~i~~~i~e~ 310 (311)
T 1nty_A 279 TPTSDNKIVLKASSIENKQDWIKHIREVIQER 310 (311)
T ss_dssp SCCTTTCEEEECSSHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCceEEEECCCHHHHHHHHHHHHHHHhhh
Confidence 1234679999999999999999999999753
No 102
>1dbh_A Protein (human SOS 1); guanine nucleotide exchange factor, gene regulation; 2.30A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1pms_A 1awe_A
Probab=96.70 E-value=0.016 Score=57.34 Aligned_cols=102 Identities=15% Similarity=0.146 Sum_probs=65.1
Q ss_pred CceEEEeeeeeeecCCCcCCCeeEEEEEeCCeEEEEecCCCCCCC---CCCccccccccEEecCCcceeec--CCCceeE
Q 012222 17 NTVFKSGPLFISSKGIGWKSWKKRWFILTRTSLVFFKNDPSALPQ---RGGEVNLTLGGIDLNNSGSVVVR--EDKKLLT 91 (468)
Q Consensus 17 ~~v~k~G~L~~~k~g~~~k~WkkRwfVL~~~~L~yyk~~~~~~~~---~~~~~~~~l~~i~l~~~~~v~~~--~~k~~~f 91 (468)
...+++|.|. +.| .++.|+|.|=++.|.|-|........ ++..+. -.+.|.+..+...... ...++.|
T Consensus 245 r~li~eG~l~--~~g----~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~~~~~y~-~k~~i~l~~~~v~~~~d~~~~~~~F 317 (354)
T 1dbh_A 245 NEFIMEGTLT--RVG----AKHERHIFLFDGLMICCKSNHGQPRLPGASNAEYR-LKEKFFMRKVQINDKDDTNEYKHAF 317 (354)
T ss_dssp CCEEEEEEEE--ETT----CSSCEEEEEESSEEEEEEECTTCCCCTTSCCCSEE-EEEEEESCSCEEEECCCSSSCCSEE
T ss_pred ceEEEEeeEE--EEe----cCceEEEEEeCCEEEEEecCCCCCCCCCCCCccee-EEEEEeccceEEEeCCcccccCccE
Confidence 4689999664 333 57899999999999988875421111 111221 2234555543321111 1234667
Q ss_pred EEEecCCCCcEEEEEeCCHHHHHHHHHHHHHHHHhC
Q 012222 92 VLFPDGRDGRAFTLKAETSEDLYEWKTALELALAQA 127 (468)
Q Consensus 92 ~i~~~~~~~r~y~l~A~s~~e~~~Wi~aI~~ai~~~ 127 (468)
.+.. .++..|.|+|.|.++...|+++|+++..++
T Consensus 318 ~i~~--~~~~~~~l~a~s~~ek~~W~~~i~~~~~~~ 351 (354)
T 1dbh_A 318 EIIL--KDENSVIFSAKSAEEKNNWMAALISLQYRS 351 (354)
T ss_dssp EECC--TTSCCEEEECSSHHHHHHHHHHHHHHHTTT
T ss_pred EEec--CCCCEEEEEeCCHHHHHHHHHHHHHHHhhc
Confidence 7654 335789999999999999999999998653
No 103
>2rgn_B RHOA/RAC/CDC42 exchange factor; heterotrimeric G-protein, small molecular weight G-protein, complex, protein-protein complex, rhogef, galphaq; HET: GDP; 3.50A {Homo sapiens}
Probab=96.63 E-value=0.014 Score=57.69 Aligned_cols=109 Identities=11% Similarity=0.103 Sum_probs=63.3
Q ss_pred CceEEEeeeeeeec--CC-CcCCCeeEEEEEeCCeEEEEecCCCCCCCCC-CccccccccEEecCCcceeecCCCceeEE
Q 012222 17 NTVFKSGPLFISSK--GI-GWKSWKKRWFILTRTSLVFFKNDPSALPQRG-GEVNLTLGGIDLNNSGSVVVREDKKLLTV 92 (468)
Q Consensus 17 ~~v~k~G~L~~~k~--g~-~~k~WkkRwfVL~~~~L~yyk~~~~~~~~~~-~~~~~~l~~i~l~~~~~v~~~~~k~~~f~ 92 (468)
...++.|.++.... |+ ..+.++.||+.|=++.|.|-+..+.....+. ..+ .-...|.+....-.....+.++.|.
T Consensus 205 ~~Ll~~g~~~v~~~~~~~~~~~~~~~r~~fLF~d~Ll~~k~~~~~~~~~~~~~y-~~k~~i~l~~~~v~~~~~~~~~~F~ 283 (354)
T 2rgn_B 205 GKLLGQDTFWVTEPEAGGLLSSRGRERRVFLFEQIIIFSEALGGGVRGGTQPGY-VYKNSIKVSCLGLEGNLQGDPCRFA 283 (354)
T ss_dssp CCEEEEEEEEEECC-------CCCCEEEEEEESSEEEEEEECC--------CCE-EEEEEEEGGGEEEEESGGGCTTEEE
T ss_pred ccccccceEEEEcCCcCccccCCCceEEEEEeCCcEEEEEeccCCCCCCCCCce-EEcceeeccceeeeeccCCCCceEE
Confidence 35788887765432 11 2356899999999999999886543211000 011 1112233332211011122345677
Q ss_pred EEecCCC--CcEEEEEeCCHHHHHHHHHHHHHHHHh
Q 012222 93 LFPDGRD--GRAFTLKAETSEDLYEWKTALELALAQ 126 (468)
Q Consensus 93 i~~~~~~--~r~y~l~A~s~~e~~~Wi~aI~~ai~~ 126 (468)
+...++. ...|.|+|.|.++...|+++|++++..
T Consensus 284 i~~~~~~~~~~~~~l~a~s~~ek~~W~~~i~~ai~~ 319 (354)
T 2rgn_B 284 LTSRGPEGGIQRYVLQAADPAISQAWIKHVAQILES 319 (354)
T ss_dssp EEEECSSSCEEEEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred EEecCCCCCceEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 7654332 378999999999999999999999964
No 104
>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}
Probab=96.56 E-value=0.01 Score=60.33 Aligned_cols=97 Identities=19% Similarity=0.246 Sum_probs=60.4
Q ss_pred CceEEEeeeeeeecCCCcCCCeeEEEEEeCCeEEEEecCCCCCCCCCCccccccccEEecCCccee-ecCCCceeEEEEe
Q 012222 17 NTVFKSGPLFISSKGIGWKSWKKRWFILTRTSLVFFKNDPSALPQRGGEVNLTLGGIDLNNSGSVV-VREDKKLLTVLFP 95 (468)
Q Consensus 17 ~~v~k~G~L~~~k~g~~~k~WkkRwfVL~~~~L~yyk~~~~~~~~~~~~~~~~l~~i~l~~~~~v~-~~~~k~~~f~i~~ 95 (468)
...+++|.|.+... ++++.|||.|=++.|.|.|..++ +.+. ....|.+....... ...+.++.|.+..
T Consensus 242 r~li~~g~l~~~~~----~~~~~r~~fLF~d~Ll~~k~~~~------~~y~-~k~~i~L~~l~v~~~~~~~~~~~f~i~~ 310 (434)
T 3mpx_A 242 REFLKEGTLMKVTG----KNRRPRHLFLMNDVLLYTYPQKD------GKYR-LKNTLAVANMKVSRPVMEKVPYALKIET 310 (434)
T ss_dssp CCEEECCEEEEEET----TEEEEEEEEEESSEEEEEEECTT------SCEE-EEEEEEC-----CCCCCTTSCSEEEEEC
T ss_pred cceEecceEEEEeC----CCceEEEEEEECCEEEEEEecCC------CeEE-EEEEEEcCCcEEEecCCCCCCeeEEEec
Confidence 46799997754332 35789999999999999985432 1121 12334444322111 1233456676642
Q ss_pred cCCCCcEEEEEeCCHHHHHHHHHHHHHHHHhC
Q 012222 96 DGRDGRAFTLKAETSEDLYEWKTALELALAQA 127 (468)
Q Consensus 96 ~~~~~r~y~l~A~s~~e~~~Wi~aI~~ai~~~ 127 (468)
..+.|.|+|.|++++.+|+++|+++|...
T Consensus 311 ---~~~~~~l~a~s~~ek~~W~~~i~~ai~e~ 339 (434)
T 3mpx_A 311 ---SESCLMLSASSCAERDEWYGCLSRALPED 339 (434)
T ss_dssp ---SSCEEEEECSSHHHHHHHHHHHHHC----
T ss_pred ---CCeEEEEecCCHHHHHHHHHHHHHHHHHH
Confidence 35689999999999999999999999753
No 105
>1kz7_A Guanine nucleotide exchange factor DBS; guanine nucleotide exchange factor (GEF), small G-protein, signaling protein; 2.40A {Mus musculus} SCOP: a.87.1.1 b.55.1.1 PDB: 1lb1_A 1kzg_A 1rj2_A
Probab=96.47 E-value=0.034 Score=54.96 Aligned_cols=109 Identities=13% Similarity=0.177 Sum_probs=65.2
Q ss_pred CceEEEeeeeee---ecCC-C-----cCCCeeEEEEEeCCeEEEEecCCCCCCC--CCCccccccccEEecCCcceeecC
Q 012222 17 NTVFKSGPLFIS---SKGI-G-----WKSWKKRWFILTRTSLVFFKNDPSALPQ--RGGEVNLTLGGIDLNNSGSVVVRE 85 (468)
Q Consensus 17 ~~v~k~G~L~~~---k~g~-~-----~k~WkkRwfVL~~~~L~yyk~~~~~~~~--~~~~~~~~l~~i~l~~~~~v~~~~ 85 (468)
...+++|.|... ++|. . +..++.|++.|=++.|.|-|........ ++..+. -...|.+..+.-.....
T Consensus 208 g~ll~~g~l~~~~~~~~g~~~~k~~~~~k~~~r~~fLF~d~Ll~~k~~~~~~~~~~~~~~y~-~k~~i~l~~~~v~e~~~ 286 (353)
T 1kz7_A 208 GKLLMQGSFSVWTDHKKGHTKVKELARFKPMQRHLFLHEKAVLFCKKREENGEGYEKAPSYS-YKQSLNMTAVGITENVK 286 (353)
T ss_dssp CCEEEEEEEEEEECCCCC-----CCCSSSCEEEEEEEESSEEEEEEEECCCCSSCCCSCEEE-EEEEEEGGGEEEECCBT
T ss_pred hhhheecceEEEecCccccchhhhhhccCcceeEEEEECCEEEEEEeccccccCCCCCCeEE-EEEEeEcccceeeEcCC
Confidence 357899987542 2231 0 2357899999999999988765421100 011111 11223333221111112
Q ss_pred CCceeEEEEecCCCCcEEEEEeCCHHHHHHHHHHHHHHHHhC
Q 012222 86 DKKLLTVLFPDGRDGRAFTLKAETSEDLYEWKTALELALAQA 127 (468)
Q Consensus 86 ~k~~~f~i~~~~~~~r~y~l~A~s~~e~~~Wi~aI~~ai~~~ 127 (468)
+.+.+|.+...+ ....|.|+|.|.+++..|+++|+.++...
T Consensus 287 ~~~~~F~i~~~~-~~~~~~l~a~s~~ek~~W~~~i~~ai~~~ 327 (353)
T 1kz7_A 287 GDTKKFEIWYNA-REEVYIIQAPTPEIKAAWVNAIRKVLTSQ 327 (353)
T ss_dssp TBTTEEEEEETT-TTEEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred CCCceEEEEECC-CCcEEEEECCCHHHHHHHHHHHHHHHHHH
Confidence 335567776543 35789999999999999999999999753
No 106
>3zvr_A Dynamin-1; hydrolase, DRP1, DRP, endocytosis, mitochondrial fission, GT stalk, PH, BSE, membrane fission; HET: 1PE; 3.10A {Rattus norvegicus} PDB: 3snh_A
Probab=96.46 E-value=0.015 Score=63.14 Aligned_cols=98 Identities=28% Similarity=0.418 Sum_probs=63.2
Q ss_pred eEEEeeeeeeecCCCcCCCeeEEEEEeCCeEEEEecCCCCCCCCCCccccccccEEecCCcceeecCCCceeEEEEecCC
Q 012222 19 VFKSGPLFISSKGIGWKSWKKRWFILTRTSLVFFKNDPSALPQRGGEVNLTLGGIDLNNSGSVVVREDKKLLTVLFPDGR 98 (468)
Q Consensus 19 v~k~G~L~~~k~g~~~k~WkkRwfVL~~~~L~yyk~~~~~~~~~~~~~~~~l~~i~l~~~~~v~~~~~k~~~f~i~~~~~ 98 (468)
++..|||-+...+..+.+=|..||||+-.+|.|||++.... ...-+++.+..+.....- --.+++.|.++-...
T Consensus 540 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 613 (772)
T 3zvr_A 540 VIRKGWLTINNIGIMKGGSKEYWFVLTAENLSWYKDDEEKE----KKYMLSVDNLKLRDVEKG--FMSSKHIFALFNTEQ 613 (772)
T ss_dssp EEEEEEEEESSSCCC---CCEEEEEEESSEEEEESSTTCCC----EEEEEECTTEEEEEC---------CEEEEEEETTS
T ss_pred ceeeeeeeecccccccCCCccceeeccccccccccchhhhc----ccccccccccccchhhhc--cccccccccccCCcc
Confidence 89999887665555555678999999999999999965543 223345555555443210 012445666654222
Q ss_pred -----CCcEEEEEeCCHHHHHHHHHHHHH
Q 012222 99 -----DGRAFTLKAETSEDLYEWKTALEL 122 (468)
Q Consensus 99 -----~~r~y~l~A~s~~e~~~Wi~aI~~ 122 (468)
+-+..-|.|+|.++...|...+-+
T Consensus 614 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 642 (772)
T 3zvr_A 614 RNVYKDYRQLELACETQEEVDSWKASFLR 642 (772)
T ss_dssp SCSBTTBSEEEEEESSHHHHHHHHHHHHH
T ss_pred ccccchhhhhhhhccccccchhhHHhhhh
Confidence 235789999999999999988654
No 107
>2dfk_A Collybistin II; DH domain, PH domain, cell cycle; 2.15A {Rattus norvegicus} SCOP: a.87.1.1 b.55.1.1
Probab=96.41 E-value=0.034 Score=55.97 Aligned_cols=109 Identities=13% Similarity=0.052 Sum_probs=64.9
Q ss_pred CCceEEEeeeeeeecCCCcCCCeeEEEEEeCCeEEEEecCCCCCCCCCCccccccccEEecCCcceeec---CCCceeEE
Q 012222 16 SNTVFKSGPLFISSKGIGWKSWKKRWFILTRTSLVFFKNDPSALPQRGGEVNLTLGGIDLNNSGSVVVR---EDKKLLTV 92 (468)
Q Consensus 16 ~~~v~k~G~L~~~k~g~~~k~WkkRwfVL~~~~L~yyk~~~~~~~~~~~~~~~~l~~i~l~~~~~v~~~---~~k~~~f~ 92 (468)
....+++|.|.... .....++.|||.|=++.|.|-|........-.-...+++..+.+.....-... ..-+++|.
T Consensus 254 ~r~Li~~G~l~~~~--~~~~k~~~r~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~l~~~~v~~~~d~~~~~~~~~~~~~F~ 331 (402)
T 2dfk_A 254 SSELIYTGEMAWIY--QPYGRNQQRVFFLFDHQMVLCKKDLIRRDILYYKGRIDMDKYEVIDIEDGRDDDFNVSMKNAFK 331 (402)
T ss_dssp CCCEEEEEEEEEES--STTCCCEEEEEEEETTEEEEEEECSSCTTCEEEEEEEEGGGEEEEECCSEECSSSCCEESSEEE
T ss_pred ccceEEeceEEEEe--ccCCceEEEEEEeeCCEEEEEEeccccCCceEEeeeeeccceEEEecCCCCccccccccceeEE
Confidence 34689999775332 22235789999999999999886432110000001123333333321110000 01134676
Q ss_pred EEecCCCCcEEEEEeCCHHHHHHHHHHHHHHHHhC
Q 012222 93 LFPDGRDGRAFTLKAETSEDLYEWKTALELALAQA 127 (468)
Q Consensus 93 i~~~~~~~r~y~l~A~s~~e~~~Wi~aI~~ai~~~ 127 (468)
+.... .+..|.|+|.|.++...|+++|+.++.+.
T Consensus 332 i~~~~-~~~~~~l~a~s~~eK~~Wi~~i~~a~~~~ 365 (402)
T 2dfk_A 332 LHNKE-TEEVHLFFAKKLEEKIRWLRAFREERKMV 365 (402)
T ss_dssp EEESS-SSCEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred EEECC-CCeEEEEEeCCHHHHHHHHHHHHHHHHHH
Confidence 65432 35689999999999999999999998764
No 108
>2pz1_A RHO guanine nucleotide exchange factor 4; helical bundle, beta barrel, beta sandwich, signaling protei; 2.25A {Homo sapiens} PDB: 2dx1_A 3nmz_D 3nmx_D
Probab=96.31 E-value=0.029 Score=57.64 Aligned_cols=103 Identities=19% Similarity=0.217 Sum_probs=64.2
Q ss_pred CceEEEeeeeeeecCCCcCCCeeEEEEEeCCeEEEEecCCCCCCCCCCccccccccEEecCCcceeecC--------CCc
Q 012222 17 NTVFKSGPLFISSKGIGWKSWKKRWFILTRTSLVFFKNDPSALPQRGGEVNLTLGGIDLNNSGSVVVRE--------DKK 88 (468)
Q Consensus 17 ~~v~k~G~L~~~k~g~~~k~WkkRwfVL~~~~L~yyk~~~~~~~~~~~~~~~~l~~i~l~~~~~v~~~~--------~k~ 88 (468)
...+++|.|.... .....++.|||.|=++.|.|-|...... ..+ .-.+.|.+....-....+ .-+
T Consensus 332 r~li~~G~l~~~~--~~~~~~~~r~~fLF~d~Ll~~k~~~~~~----~~~-~~k~~i~l~~~~v~~~~d~~~~~~~~~~~ 404 (466)
T 2pz1_A 332 SELIYSGELTRVT--QPQAKSQQRMFFLFDHQLIYCKKDLLRR----DVL-YYKGRLDMDGLEVVDLEDGKDRDLHVSIK 404 (466)
T ss_dssp SCEEEEEEEEEEC--TTTCCEEEEEEEEETTEEEEEEECSSCT----TCE-EEEEEEETTTCEEEECCSBSCCSSCCCBC
T ss_pred ceeEEeeeEEEEe--cCCCCeeEEEEEEECCEEEEEEeccccC----Cce-EEeeeeeccceEEEeCCCCcccccccccc
Confidence 4689999775332 2234578999999999999988643211 111 112233333321111111 123
Q ss_pred eeEEEEecCCCCcEEEEEeCCHHHHHHHHHHHHHHHHhC
Q 012222 89 LLTVLFPDGRDGRAFTLKAETSEDLYEWKTALELALAQA 127 (468)
Q Consensus 89 ~~f~i~~~~~~~r~y~l~A~s~~e~~~Wi~aI~~ai~~~ 127 (468)
++|.+.... ....|.|+|.|.++...|+++|+.++.+.
T Consensus 405 ~~F~i~~~~-~~~~~~l~a~s~~eK~~W~~~i~~a~~~~ 442 (466)
T 2pz1_A 405 NAFRLHRGA-TGDSHLLCTRKPEQKQRWLKAFAREREQV 442 (466)
T ss_dssp EEEEEECSS-SCCEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred eeEEEEeCC-CCeEEEEEeCCHHHHHHHHHHHHHHHHHH
Confidence 567765422 35689999999999999999999999864
No 109
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=96.17 E-value=0.029 Score=56.54 Aligned_cols=104 Identities=18% Similarity=0.244 Sum_probs=63.1
Q ss_pred ceEEEeeeeeeecCCCcCCCeeEEEEEeCCeEEEEecCCCCCCCCCCccccccccEEecCCccee-ecCCCceeEEEEec
Q 012222 18 TVFKSGPLFISSKGIGWKSWKKRWFILTRTSLVFFKNDPSALPQRGGEVNLTLGGIDLNNSGSVV-VREDKKLLTVLFPD 96 (468)
Q Consensus 18 ~v~k~G~L~~~k~g~~~k~WkkRwfVL~~~~L~yyk~~~~~~~~~~~~~~~~l~~i~l~~~~~v~-~~~~k~~~f~i~~~ 96 (468)
..+++|.|.+.. ...+.++.||+.|=++.|.+-|...... .-...+++..+.+.....-. .....++.|.+...
T Consensus 233 rli~~G~l~~~~--~~~~~~~~~~~fLF~d~Ll~~k~k~~~y---~~k~~i~l~~~~v~~~~~~~~~~~~~~~~F~i~~~ 307 (406)
T 2vrw_B 233 RPKIDGELKITS--VERRSKTDRYAFLLDKALLICKRRGDSY---DLKASVNLHSFQVRDDSSGERDNKKWSHMFLLIED 307 (406)
T ss_dssp SEEEEEEEEEEC--SSCCSCEEEEEEEESSEEEEEEEETTEE---EEEEEEETTTEEEEC--------CTTCEEEEEEET
T ss_pred cccccccEEEEe--cCCCccceEEEEecCCEEEEEEecCCce---EEEEEecccceeeeecCCCCccCCccceeeEEEec
Confidence 478999775332 2235689999999999998887642111 00011233333333221100 00112356766543
Q ss_pred CCCCcEEEEEeCCHHHHHHHHHHHHHHHHhC
Q 012222 97 GRDGRAFTLKAETSEDLYEWKTALELALAQA 127 (468)
Q Consensus 97 ~~~~r~y~l~A~s~~e~~~Wi~aI~~ai~~~ 127 (468)
. ..+.|.|+|.|.++++.|+++|+.++...
T Consensus 308 ~-~~~~~~l~a~s~~ek~~W~~~i~~ai~~~ 337 (406)
T 2vrw_B 308 Q-GAQGYELFFKTRELKKKWMEQFEMAISNI 337 (406)
T ss_dssp T-CSCEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred C-CCceEEEeCCCHHHHHHHHHHHHHHHhhh
Confidence 2 35679999999999999999999999764
No 110
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=95.73 E-value=0.042 Score=58.24 Aligned_cols=104 Identities=17% Similarity=0.208 Sum_probs=62.8
Q ss_pred ceEEEeeeeeeecCCCcCCCeeEEEEEeCCeEEEEecCCCCCCCCCCccccccccEEecCCccee-ecCCCceeEEEEec
Q 012222 18 TVFKSGPLFISSKGIGWKSWKKRWFILTRTSLVFFKNDPSALPQRGGEVNLTLGGIDLNNSGSVV-VREDKKLLTVLFPD 96 (468)
Q Consensus 18 ~v~k~G~L~~~k~g~~~k~WkkRwfVL~~~~L~yyk~~~~~~~~~~~~~~~~l~~i~l~~~~~v~-~~~~k~~~f~i~~~ 96 (468)
..+++|.|.+. ....+.++.||+.|=.+.|.|-|...... .-...+++..+.+.....-. ....-++.|.+...
T Consensus 405 rll~~G~l~~~--~~~~~~~~~r~~fLF~d~Ll~~k~~~~~y---~~k~~i~L~~~~v~~~~~~~~~~~~~~~~f~i~~~ 479 (587)
T 3ky9_A 405 RPKIDGELKIT--SVERRSKMDRYAFLLDKALLICKRRGDSY---DLKDFVNLHSFQVRDDSSGDRDNKKWSHMFLLIED 479 (587)
T ss_dssp CEEEEEEEEEE--CSSCCSCEEEEEEEETTEEEEEEEETTEE---EEEEEEEGGGEEEEEC-----CCCTTCEEEEEEET
T ss_pred ceEEEeeEEEE--eccCCCcceEEEEEECCEEEEEEecCCEE---EeeeeechhhceeeecCCCCcccccccceeEEEEc
Confidence 47899977533 33346789999999999999987642111 00111233444443221100 00112356666653
Q ss_pred CCCCcEEEEEeCCHHHHHHHHHHHHHHHHhC
Q 012222 97 GRDGRAFTLKAETSEDLYEWKTALELALAQA 127 (468)
Q Consensus 97 ~~~~r~y~l~A~s~~e~~~Wi~aI~~ai~~~ 127 (468)
. +.+.|.|+|.|.+++..|+++|+.++...
T Consensus 480 ~-~~~~~~L~A~S~eeK~~Wi~~I~~ai~~~ 509 (587)
T 3ky9_A 480 Q-GAQGYELFFKTRELKKKWMEQFEMAISNI 509 (587)
T ss_dssp T-C---CEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred C-CCceEEEEeCCHHHHHHHHHHHHHHhhhh
Confidence 2 23689999999999999999999999764
No 111
>2z0q_A XPLN, RHO guanine nucleotide exchange factor 3; DH-PH domain, alternative splicing, cytoplasm, guanine- nucleotide releasing factor; 1.79A {Mus musculus} PDB: 3eo2_A
Probab=95.54 E-value=0.059 Score=52.91 Aligned_cols=100 Identities=15% Similarity=0.116 Sum_probs=59.2
Q ss_pred ceEEEeeeeeeecCCCcCCCeeEEEEEeCCeEEEEecCCCCCCCCC--CccccccccEEecCCcc--eee----------
Q 012222 18 TVFKSGPLFISSKGIGWKSWKKRWFILTRTSLVFFKNDPSALPQRG--GEVNLTLGGIDLNNSGS--VVV---------- 83 (468)
Q Consensus 18 ~v~k~G~L~~~k~g~~~k~WkkRwfVL~~~~L~yyk~~~~~~~~~~--~~~~~~l~~i~l~~~~~--v~~---------- 83 (468)
..+++|.|. +++ .+.||+.|=++.|.+-|.........- -...+++..+.+..... +..
T Consensus 231 ~li~~G~l~--~~~-----~~~~~~fLF~d~Ll~~k~~~~~~~~~~~v~k~~i~l~~l~v~~~~d~~~~~~~s~~g~~~~ 303 (346)
T 2z0q_A 231 VLCCHGELK--NNR-----GVKLHVFLFQEVLVITRAVTHNEQLCYQLYRQPIPVKDLTLEDLQDGEVRLGGSLRGAFSN 303 (346)
T ss_dssp CEEEEEEEE--ETT-----SCEEEEEEESSEEEEEEEEEETTEEEEEESSCCEEGGGCEEEECCTTTSCCCSCC--CCSH
T ss_pred EEEEeceeE--ECC-----CcEEEEEECCCcEEEEEEeccCCceeeeeecCCcchhhceeeecCCCccccCccccccccC
Confidence 578999763 222 278999999999988875322110000 00112333333332210 000
Q ss_pred cCCCceeEEEEec-CCCCcEEEEEeCCHHHHHHHHHHHHHHH
Q 012222 84 REDKKLLTVLFPD-GRDGRAFTLKAETSEDLYEWKTALELAL 124 (468)
Q Consensus 84 ~~~k~~~f~i~~~-~~~~r~y~l~A~s~~e~~~Wi~aI~~ai 124 (468)
....+++|.+... ...+..|.|+|.|.++...|+++|++|+
T Consensus 304 ~~~~~~~F~i~~~~~~~~~~~~l~a~s~~ek~~W~~~i~~ai 345 (346)
T 2z0q_A 304 NERVKNFFRVSFKNGSQSQTHSLQANDTFNKQQWLNCIRQAK 345 (346)
T ss_dssp HHHTSSEEEEEECCGGGCEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred CcccccceEEEEecCCCCceEEEEECCHHHHHHHHHHHHHhh
Confidence 0113457777643 2235789999999999999999999987
No 112
>3ksy_A SOS-1, SON of sevenless homolog 1; RAS, RAS activator, disease mutation, guanine-nucleotide releasing factor, signaling protein; 3.18A {Homo sapiens} PDB: 1xd4_A 1xdv_A 1q9c_A
Probab=95.47 E-value=0.054 Score=61.34 Aligned_cols=102 Identities=17% Similarity=0.172 Sum_probs=63.5
Q ss_pred CceEEEeeeeeeecCCCcCCCeeEEEEEeCCeEEEEecCCCCCCCCC---CccccccccEEecCCcceeec--CCCceeE
Q 012222 17 NTVFKSGPLFISSKGIGWKSWKKRWFILTRTSLVFFKNDPSALPQRG---GEVNLTLGGIDLNNSGSVVVR--EDKKLLT 91 (468)
Q Consensus 17 ~~v~k~G~L~~~k~g~~~k~WkkRwfVL~~~~L~yyk~~~~~~~~~~---~~~~~~l~~i~l~~~~~v~~~--~~k~~~f 91 (468)
...+++|.|. +.+. + +.||+.|=++.|.|-|..+......| ..+ .-...+.+....-.... ..-++.|
T Consensus 442 r~Li~eG~l~--~~~~--k--~~r~~FLF~D~Ll~~K~~~~~~~~~g~~~~~y-~~k~~i~L~~l~V~~~~d~~~~~~~F 514 (1049)
T 3ksy_A 442 NEFIMEGTLT--RVGA--K--HERHIFLFDGLMICCKSNHGQPRLPGASNAEY-RLKEKFFMRKVQINDKDDTNEYKHAF 514 (1049)
T ss_dssp SCCCCEEEEE--ETTC--S--SCEEEEEETTEEEEEECCTTCCCCTTSCCCSC-CCCCEECCSSCCCCCCCCSSSCCSEE
T ss_pred ceEEEeceEE--EEcc--C--ceEEEEeeCCeEEEEEecCccCCCCCCCCCce-EEEEEEEcCceEEEECCCCccccceE
Confidence 4578999664 4332 1 78999999999999987643221111 111 12233444332211111 2234566
Q ss_pred EEEecCCCCcEEEEEeCCHHHHHHHHHHHHHHHHhC
Q 012222 92 VLFPDGRDGRAFTLKAETSEDLYEWKTALELALAQA 127 (468)
Q Consensus 92 ~i~~~~~~~r~y~l~A~s~~e~~~Wi~aI~~ai~~~ 127 (468)
.+.. .++..|.|+|.|.+++..|+++|+.+..++
T Consensus 515 ~I~~--~~~~~~~L~A~S~eeK~~Wi~~I~~~q~k~ 548 (1049)
T 3ksy_A 515 EIIL--KDENSVIFSAKSAEEKNNWMAALISLQYRS 548 (1049)
T ss_dssp EECC--TTSCCEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred EEEc--CCCCEEEEeCCCHHHHHHHHHHHHHHHHHH
Confidence 6643 345689999999999999999999888654
No 113
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=95.44 E-value=0.068 Score=57.37 Aligned_cols=97 Identities=22% Similarity=0.350 Sum_probs=60.5
Q ss_pred CCceEEEeeeeeeecCC-CcCCCeeEEEEEeCCeEEEEecCCCCCCCCCCccccccccEEecCCcceeec-CCCceeEEE
Q 012222 16 SNTVFKSGPLFISSKGI-GWKSWKKRWFILTRTSLVFFKNDPSALPQRGGEVNLTLGGIDLNNSGSVVVR-EDKKLLTVL 93 (468)
Q Consensus 16 ~~~v~k~G~L~~~k~g~-~~k~WkkRwfVL~~~~L~yyk~~~~~~~~~~~~~~~~l~~i~l~~~~~v~~~-~~k~~~f~i 93 (468)
...+++.|++ .|.|+ ....|++|++.|..+.+.+.-..... . ..+.+..+..|... .....++.+
T Consensus 556 ~~~~i~~G~~--~k~~g~f~~~~~rR~~~l~p~r~e~~~e~~~~-----~------~l~~~~~v~~v~k~~i~~~~~l~~ 622 (689)
T 3v5w_A 556 GKDCIMHGYM--SKMGNPFLTQWQRRYFYLFPNRLEWRGEGEAP-----Q------SLLTMEEIQSVEETQIKERKCLLL 622 (689)
T ss_dssp SSCCCEEEEE--EEC-------CEEEEEEEETTEEEEECTTSCC-----C------EEEEGGGEEEEEEEESSSCEEEEE
T ss_pred CCcceeeccc--ccCCCcccchhhhhccccCCCcccccccCCCC-----c------ceeeeccccccccCcCCCCcceee
Confidence 4578899955 45443 46789999999999988877542211 1 12333332222111 122344444
Q ss_pred EecCCCCcEEEEEeCCHHHHHHHHHHHHHHHHhC
Q 012222 94 FPDGRDGRAFTLKAETSEDLYEWKTALELALAQA 127 (468)
Q Consensus 94 ~~~~~~~r~y~l~A~s~~e~~~Wi~aI~~ai~~~ 127 (468)
. ..++++|++.+.+..++.+|..+|+.+-+.+
T Consensus 623 ~--~k~~k~f~~~t~~~~~~~~W~~~i~~~~~~~ 654 (689)
T 3v5w_A 623 K--IRGGKQFILQCDSDPELVQWKKELRDAYREA 654 (689)
T ss_dssp E--ETTTEEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred e--ecCCcEEEEECCChHHHHHHHHHHHHHHHHH
Confidence 4 4678999999999999999999999888654
No 114
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=95.25 E-value=0.0031 Score=65.57 Aligned_cols=98 Identities=16% Similarity=0.165 Sum_probs=0.0
Q ss_pred ceEEEeeeeeeecCCCcCCCeeEEEEEeCCeEEEEecCCCCCCCCC----------Ccc-----ccccccEEecCCccee
Q 012222 18 TVFKSGPLFISSKGIGWKSWKKRWFILTRTSLVFFKNDPSALPQRG----------GEV-----NLTLGGIDLNNSGSVV 82 (468)
Q Consensus 18 ~v~k~G~L~~~k~g~~~k~WkkRwfVL~~~~L~yyk~~~~~~~~~~----------~~~-----~~~l~~i~l~~~~~v~ 82 (468)
..+++|.|.+. ++++.|||.|=.+.|.|.+..+......| ..+ .+++..+.+....
T Consensus 252 ~li~eG~l~~~------~~~~~~~~fLF~d~Ll~~k~~~~~~~~~g~~~~f~~~~~~~~~v~k~~i~l~~~~v~~~~--- 322 (510)
T 3jzy_A 252 KLLHSGKLYKT------KSNKELHGFLFNDFLLLTYMVKQFAVSSGSEKLFSSKSNAQFKMYKTPIFLNEVLVKLPT--- 322 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eeEEeceEEEc------CCCcEEEEEcccceeEEeeecccccccCCcccccCcccccceeEEcCceehhheEEeccC---
Confidence 56788866532 35789999999999998875443211111 111 1222233222211
Q ss_pred ecCCCceeEEEEecCCCCcEEEEEeCCHHHHHHHHHHHHHHHHhC
Q 012222 83 VREDKKLLTVLFPDGRDGRAFTLKAETSEDLYEWKTALELALAQA 127 (468)
Q Consensus 83 ~~~~k~~~f~i~~~~~~~r~y~l~A~s~~e~~~Wi~aI~~ai~~~ 127 (468)
.....+++|.+.. ..++|.|+|.|.+++.+|+++|++++...
T Consensus 323 d~~~~~~~F~i~~---~~~~~~l~a~s~~ek~~W~~~i~~ai~~~ 364 (510)
T 3jzy_A 323 DPSSDEPVFHISH---IDRVYTLRTDNINERTAWVQKIKAASEQY 364 (510)
T ss_dssp ---------------------------------------------
T ss_pred CCCccccceeeec---cceeEEeccCCHHHHHHHHHHHHHHHHHH
Confidence 1123456777754 34689999999999999999999999764
No 115
>1foe_A T-lymphoma invasion and metastasis inducing protein 1; DBL homology domain, pleckstrin homology domain, GTPase, guanine nucleotide exchange factor; 2.80A {Mus musculus} SCOP: a.87.1.1 b.55.1.1
Probab=93.02 E-value=1.1 Score=44.25 Aligned_cols=28 Identities=18% Similarity=0.271 Sum_probs=25.4
Q ss_pred CCcEEEEEeCCHHHHHHHHHHHHHHHHh
Q 012222 99 DGRAFTLKAETSEDLYEWKTALELALAQ 126 (468)
Q Consensus 99 ~~r~y~l~A~s~~e~~~Wi~aI~~ai~~ 126 (468)
..+.|.|+|.|.++...|+.+|.+++..
T Consensus 340 ~~~~~~l~A~s~~eK~~W~~~i~~~i~~ 367 (377)
T 1foe_A 340 PERVFHLCCSSPESRKDFLKSVHSILRD 367 (377)
T ss_dssp CCEEEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred CcceEEEEeCCHHHHHHHHHHHHHHhhH
Confidence 3578999999999999999999999964
No 116
>3hie_A Protein PSL1, exocyst complex component SEC3; PH domain, dimer, domain swapping, phosphate-binding, coiled coil, exocytosis; 2.00A {Saccharomyces cerevisiae}
Probab=82.52 E-value=7.5 Score=33.69 Aligned_cols=82 Identities=15% Similarity=0.085 Sum_probs=54.2
Q ss_pred CeeEEEEEe-----CCeEEEEecCCCCCCCCCCccccccccEEecCCcceeecCCCceeEEEEecCCCCcEEEEEeCCHH
Q 012222 37 WKKRWFILT-----RTSLVFFKNDPSALPQRGGEVNLTLGGIDLNNSGSVVVREDKKLLTVLFPDGRDGRAFTLKAETSE 111 (468)
Q Consensus 37 WkkRwfVL~-----~~~L~yyk~~~~~~~~~~~~~~~~l~~i~l~~~~~v~~~~~k~~~f~i~~~~~~~r~y~l~A~s~~ 111 (468)
=|.|+.+|. .+.+..+|.+.... +.+. .-..-.|.....|.........|.++. +++|+.+|++..
T Consensus 64 KK~R~L~lav~~~~sgrV~lhK~K~N~n----gsfs-iGkTW~L~ELk~Ie~~~~~~~gF~ltl----~K~Y~W~a~s~~ 134 (171)
T 3hie_A 64 KKKRLLILSAKPNNAKLIQIHKARENSD----GSFQ-IGRTWQLTELVRVEKDLEISEGFILTM----SKKYYWETNSAK 134 (171)
T ss_dssp EEEEEEEEEECTTCTTCEEEEEEEECTT----SCEE-EEEEEEGGGCCEEEECSSCTTEEEEES----SSEEEEECSSHH
T ss_pred ccceEEEEEEecCCCceEEEEEEEECCC----CcEE-eeeeeecccceeeeccCCCCCcEEEEe----CCeEEEecCCHH
Confidence 478898883 34577787765432 1111 111233444444433223455788887 799999999999
Q ss_pred HHHHHHHHHHHHHHhC
Q 012222 112 DLYEWKTALELALAQA 127 (468)
Q Consensus 112 e~~~Wi~aI~~ai~~~ 127 (468)
|+..++..|-+...+.
T Consensus 135 Er~~FI~sL~K~y~ky 150 (171)
T 3hie_A 135 ERTVFIKSLITLYIQT 150 (171)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999988765
No 117
>1fho_A UNC-89; pleckstrin homology domain, electrostatics, muscle, signal transduction, signaling protein; NMR {Caenorhabditis elegans} SCOP: b.55.1.1
Probab=81.75 E-value=2.5 Score=34.59 Aligned_cols=101 Identities=14% Similarity=0.141 Sum_probs=59.8
Q ss_pred ceEEEeeeeeeecCCCcCCCeeEEEEEeCCeEEEEecCCCCCCCCCCccccccccEEecCCcceeecC-CCceeEEEEec
Q 012222 18 TVFKSGPLFISSKGIGWKSWKKRWFILTRTSLVFFKNDPSALPQRGGEVNLTLGGIDLNNSGSVVVRE-DKKLLTVLFPD 96 (468)
Q Consensus 18 ~v~k~G~L~~~k~g~~~k~WkkRwfVL~~~~L~yyk~~~~~~~~~~~~~~~~l~~i~l~~~~~v~~~~-~k~~~f~i~~~ 96 (468)
..++.|++...... +.=+.|++.|=...|.|-|-. +. .+.....-...|.++...--.... +....|.+...
T Consensus 9 ~Ll~q~~f~V~~~~---~k~~eR~vFLFe~~ilf~K~~-~~---~~~~~Y~~K~~ikl~~~~lte~~~~~d~~kFeiw~~ 81 (119)
T 1fho_A 9 RIIRHDAFQVWEGD---EPPKLRYVFLFRNKIMFTEQD-AS---TSPPSYTHYSSIRLDKYNIRQHTTDEDTIVLQPQEP 81 (119)
T ss_dssp CSSEEEEEEECSTT---CSCEEEEEEEETTEEEEEEEC-CS---SSSCCCSSCCEEESSSCEEEEECTTCCEEEEECCST
T ss_pred CccccCceEEEeCC---CCcceEEEEEecCcEEEEEEe-cC---CCCCcEEEeeEEeeceeEEEecCCCCCCcEEEEccC
Confidence 56778866543321 223679999999999998865 21 111111222334444332111222 34455776543
Q ss_pred CCCCcEEEE--EeCCHH-HHHHHHHHHHHHHHh
Q 012222 97 GRDGRAFTL--KAETSE-DLYEWKTALELALAQ 126 (468)
Q Consensus 97 ~~~~r~y~l--~A~s~~-e~~~Wi~aI~~ai~~ 126 (468)
.. ...|.+ +|.|.+ ..+.|++.|++++.+
T Consensus 82 ~~-~~~~il~~qA~s~e~~K~~Wv~~I~~~~~~ 113 (119)
T 1fho_A 82 GL-PSFRIKPKDFETSEYVRKAWLRDIAEEQEK 113 (119)
T ss_dssp TC-CCBCCCCCSSSSCSHHHHHHHHHHHTCCHH
T ss_pred CC-CceEEEeeecCCcHHHHHHHHHHHHHHHHH
Confidence 32 356888 999999 999999999985543
No 118
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=80.26 E-value=3 Score=39.13 Aligned_cols=38 Identities=18% Similarity=0.328 Sum_probs=30.8
Q ss_pred CCceeEEEEecCCCC-cEEEEEeCCHHHHHHHHHHHHHHHH
Q 012222 86 DKKLLTVLFPDGRDG-RAFTLKAETSEDLYEWKTALELALA 125 (468)
Q Consensus 86 ~k~~~f~i~~~~~~~-r~y~l~A~s~~e~~~Wi~aI~~ai~ 125 (468)
.+.++|.+.. .+| .+..|+|++..++..|+.+|..+|.
T Consensus 224 ~~~~~fev~s--~dG~~t~~l~~~d~~~a~~W~~ai~~~i~ 262 (263)
T 1z87_A 224 PEPRYLEICA--ADGQDAVFLRAKDEASARSWAGAIQAQIG 262 (263)
T ss_dssp SSSCEEEEEE--TTTTEEEEEECSSHHHHHHHHHHHHHHHC
T ss_pred CCCceEEEEC--CCCCeeEEEEECCHHHHHHHHHHHHHHhc
Confidence 3667787764 344 5689999999999999999999874
No 119
>2adz_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus} SCOP: b.55.1.1
Probab=70.88 E-value=7.2 Score=34.11 Aligned_cols=37 Identities=19% Similarity=0.343 Sum_probs=29.3
Q ss_pred CceeEEEEecCCCC-cEEEEEeCCHHHHHHHHHHHHHHHH
Q 012222 87 KKLLTVLFPDGRDG-RAFTLKAETSEDLYEWKTALELALA 125 (468)
Q Consensus 87 k~~~f~i~~~~~~~-r~y~l~A~s~~e~~~Wi~aI~~ai~ 125 (468)
...+|.+.. .+| .+-.|+|.+..++..|+++|...|.
T Consensus 140 e~r~fEv~s--~DG~~t~iLrc~D~a~a~~Wf~aI~sni~ 177 (178)
T 2adz_A 140 EPRYLEICA--ADGQDAVFLRAKDEASARSWAGAIQAQIG 177 (178)
T ss_dssp SSCEEEEEE--TTTTEEEEECCSSHHHHHHHHHHHHHHHT
T ss_pred CccEEEEEc--CCCCeeEEEEeCCHHHHHHHHHHHHHhcc
Confidence 445677654 334 5789999999999999999998874
No 120
>3a58_A Exocyst complex component SEC3; protein complex, PH domain, GTPase, membrane traffic, coiled coil, exocytosis, phosphoprotein; HET: GNP; 2.60A {Saccharomyces cerevisiae}
Probab=68.59 E-value=18 Score=34.09 Aligned_cols=85 Identities=14% Similarity=0.088 Sum_probs=54.4
Q ss_pred cCCCeeEEEEEe-----CCeEEEEecCCCCCCCCCCccccccccEEecCCcceeecCCCceeEEEEecCCCCcEEEEEeC
Q 012222 34 WKSWKKRWFILT-----RTSLVFFKNDPSALPQRGGEVNLTLGGIDLNNSGSVVVREDKKLLTVLFPDGRDGRAFTLKAE 108 (468)
Q Consensus 34 ~k~WkkRwfVL~-----~~~L~yyk~~~~~~~~~~~~~~~~l~~i~l~~~~~v~~~~~k~~~f~i~~~~~~~r~y~l~A~ 108 (468)
.+.=|.||.+|. .+.++.+|.+.... +.+. .-..-+|.+...|...-.....|.++. ++.|+.+|.
T Consensus 131 ~kkKK~R~LcLaV~~d~sGRV~LhKaKeN~n----gsFs-IGKTW~L~ELk~Id~~~~~~~gF~LTl----~K~YyW~A~ 201 (320)
T 3a58_A 131 LENKKKRLLILSAKPNNAKLIQIHKARENSD----GSFQ-IGRTWQLTELVRVEKDLEISEGFILTM----SKKYYWETN 201 (320)
T ss_dssp GGGEEEEEEEEEECSSCTTCEEEEEEEECGG----GCEE-EEEEEEGGGCCEEEECSSCTTEEEEES----SSEEEEEES
T ss_pred ccccCceEEEEEEecCCCceEEEEEEEecCC----CceE-ecceechhhhhhhhcccCCCCceEEEe----CCceEEecC
Confidence 345689998883 33578887755432 1111 111233333333321112335788887 899999999
Q ss_pred CHHHHHHHHHHHHHHHHhC
Q 012222 109 TSEDLYEWKTALELALAQA 127 (468)
Q Consensus 109 s~~e~~~Wi~aI~~ai~~~ 127 (468)
+..|+..+|..|-+...+.
T Consensus 202 s~kER~~FI~sLvKiy~KY 220 (320)
T 3a58_A 202 SAKERTVFIKSLITLYIQT 220 (320)
T ss_dssp SHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHH
Confidence 9999999999999988764
No 121
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=66.59 E-value=19 Score=39.32 Aligned_cols=38 Identities=16% Similarity=-0.001 Sum_probs=28.0
Q ss_pred eeEEEEecCC--CCcEEEEEeCCHHHHHHHHHHHHHHHHh
Q 012222 89 LLTVLFPDGR--DGRAFTLKAETSEDLYEWKTALELALAQ 126 (468)
Q Consensus 89 ~~f~i~~~~~--~~r~y~l~A~s~~e~~~Wi~aI~~ai~~ 126 (468)
.||.|..... +-+...|.|.+.++++.|+..|+..+..
T Consensus 104 r~fTIvyg~~~~nL~~l~LvA~s~e~A~~W~~gL~~L~~~ 143 (816)
T 3qr0_A 104 KCVTICHGYNYIDLEWTHLVAENSSVAKKWSEEVFSYAYN 143 (816)
T ss_dssp HEEEEEECSSSSSCEEEEEEESSHHHHHHHHHHHHHHHTC
T ss_pred cEEEEEECCCcccceEEEEeeCCHHHHHHHHHHHHHHHHH
Confidence 4677765322 1134489999999999999999998753
No 122
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=61.82 E-value=26 Score=38.20 Aligned_cols=38 Identities=3% Similarity=-0.090 Sum_probs=29.3
Q ss_pred eeEEEEecCCC--CcEEEEEeCCHHHHHHHHHHHHHHHHh
Q 012222 89 LLTVLFPDGRD--GRAFTLKAETSEDLYEWKTALELALAQ 126 (468)
Q Consensus 89 ~~f~i~~~~~~--~r~y~l~A~s~~e~~~Wi~aI~~ai~~ 126 (468)
.||.|...... -+.+.|.|.+.++++.|++.|+..+..
T Consensus 97 ~~fTIvyg~~~~~l~~L~lvA~s~~ea~~Wv~GL~~L~~~ 136 (799)
T 2zkm_X 97 KTLTVVSGPDMVDLTFHNFVSYKENVGKAWAEDVLALVKH 136 (799)
T ss_dssp TEEEEEECSSSSSCEEEEEEESSSSHHHHHHHHHHHHHHC
T ss_pred ceEEEEECCCccceeEEEEEeCCHHHHHHHHHHHHHHHHH
Confidence 47777653221 136899999999999999999998874
No 123
>3ulb_A Target of rapamycin complex 2 subunit AVO1; PH domain, membrane localization, membrane protein; 1.90A {Saccharomyces cerevisiae} PDB: 3ulc_A
Probab=56.18 E-value=79 Score=25.56 Aligned_cols=28 Identities=21% Similarity=0.246 Sum_probs=24.9
Q ss_pred CCcEEEEEeCCHHHHHHHHHHHHHHHHh
Q 012222 99 DGRAFTLKAETSEDLYEWKTALELALAQ 126 (468)
Q Consensus 99 ~~r~y~l~A~s~~e~~~Wi~aI~~ai~~ 126 (468)
..+.|.|-|.|.+|+.+=|..|+..++.
T Consensus 88 e~KrYdfEA~s~~ea~EIV~~ik~~~~~ 115 (121)
T 3ulb_A 88 DIKRYYFEAVSGQECTEIVTRLQNLLSA 115 (121)
T ss_dssp SCEEEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred CcceeEEEeCCHHHHHHHHHHHHHHHHH
Confidence 3478999999999999999999998863
No 124
>3a98_B Engulfment and cell motility protein 1; protein-protein complex, DOCK2, ELMO1, SH3 domain, PH domain bundle, proline-rich sequence, cytoskeleton; 2.10A {Homo sapiens} PDB: 2vsz_A
Probab=49.01 E-value=1.1e+02 Score=27.17 Aligned_cols=35 Identities=14% Similarity=0.269 Sum_probs=28.2
Q ss_pred eEEEEecCCCCcEEEEEeCCHHHHHHHHHHHHHHHHh
Q 012222 90 LTVLFPDGRDGRAFTLKAETSEDLYEWKTALELALAQ 126 (468)
Q Consensus 90 ~f~i~~~~~~~r~y~l~A~s~~e~~~Wi~aI~~ai~~ 126 (468)
.|.+... .+..+.|.|.|+.+...|++-|+-.+.+
T Consensus 117 aFSii~~--~~~~L~fvA~s~~~~~~W~DGL~~Llg~ 151 (203)
T 3a98_B 117 AFSILYD--SNCQLNFIAPDKHEYCIWTDGLNALLGK 151 (203)
T ss_dssp EEEEEET--TTEEEEEECSSHHHHHHHHHHHHHHTTC
T ss_pred EEEEecC--CCceEEEecCCHHHHHHHHHHHHHHhcC
Confidence 5666542 3478999999999999999999987753
No 125
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=48.09 E-value=32 Score=37.82 Aligned_cols=38 Identities=11% Similarity=0.065 Sum_probs=28.7
Q ss_pred eeEEEEecCCC--CcEEEEEeCCHHHHHHHHHHHHHHHHh
Q 012222 89 LLTVLFPDGRD--GRAFTLKAETSEDLYEWKTALELALAQ 126 (468)
Q Consensus 89 ~~f~i~~~~~~--~r~y~l~A~s~~e~~~Wi~aI~~ai~~ 126 (468)
.+|.|...... -..+.|.|.+.++++.|++.|+..+..
T Consensus 101 r~fTIvyg~d~~n~~~LdLVA~s~e~a~~W~~gL~~L~~~ 140 (885)
T 3ohm_B 101 KLMTVVSGPDPVNTVFLNFMAVQDDTAKVWSEELFKLAMN 140 (885)
T ss_dssp TEEEEEECSSGGGCEEEEEEESSSSHHHHHHHHHHHHHHC
T ss_pred cEEEEEECCCCccceEEEEEeCChHHHHHHHHHHHHHHhh
Confidence 46777653211 135899999999999999999998864
No 126
>4emo_A Sharpin; pleckstrin homology (PH) domain, lubac, SIPL1, linear ubiqui HOIL-1L, HOIP, protein binding; 2.00A {Homo sapiens}
Probab=44.71 E-value=24 Score=28.31 Aligned_cols=38 Identities=11% Similarity=0.128 Sum_probs=29.8
Q ss_pred ceeEEEEecCCCCcEEEEEeCCHHHHHHHHHHHHHHHH
Q 012222 88 KLLTVLFPDGRDGRAFTLKAETSEDLYEWKTALELALA 125 (468)
Q Consensus 88 ~~~f~i~~~~~~~r~y~l~A~s~~e~~~Wi~aI~~ai~ 125 (468)
..|+.+.+.....-++.|+.-+.+|+++|-..++.+..
T Consensus 86 P~~hELqpp~~gpg~lsl~F~~~qeAQrWA~lv~~a~~ 123 (129)
T 4emo_A 86 PTQHELQPPPGGPGTLSMHFLNPQEAQRWAVLVRGATV 123 (129)
T ss_dssp TTEEEEECCTTSSCCEEEEESSHHHHHHHHHHHHHHCC
T ss_pred cccccccCCCCCCCeEEEeeCCHHHHHHHHHHHHhhhc
Confidence 35788877555556799999999999999877777654
No 127
>3llb_A Uncharacterized protein; protein PA3983, unknown function, structural genomics, PSI2, MCSG, protein structure initiative; 1.80A {Pseudomonas aeruginosa} SCOP: d.145.1.0
Probab=29.86 E-value=39 Score=25.11 Aligned_cols=46 Identities=24% Similarity=0.291 Sum_probs=35.1
Q ss_pred ccCcEeecCCHHHHHHHHHHHhcCCCCCCCCCChhHHHHHHHHHHhhCCCC
Q 012222 198 VEGILRQAADVEEVDRRVQEYEQGKTEFSADEDAHVIGDCVKHVLRELPSS 248 (468)
Q Consensus 198 ~eGIFR~~g~~~~v~~l~~~~~~g~~~~~~~~d~~~va~llK~fLr~LP~p 248 (468)
.+|-|.+.|... ++.+.+.|+-. + ...+..++++++-.-|..+|..
T Consensus 7 ~dg~~~v~G~~~-l~dl~~~l~~~---l-~~~~~~Tl~G~i~~~lg~iP~~ 52 (83)
T 3llb_A 7 PSGDFIVKALTP-VDAFNDFFGSE---F-SDEEFDTVGGLVMSAFGHLPKR 52 (83)
T ss_dssp TTSCEEEETTCB-HHHHHHHHCCC---C-CTTTCSBHHHHHHHHHSSCCCT
T ss_pred CCCEEEEEccCC-HHHHHHHhCCC---C-CCCCCcCHHHHHHHHhCcCCCC
Confidence 468899998765 66777777642 2 2457789999999999999964
No 128
>2r2z_A Hemolysin; APC85144, enterococcus faecalis V583, STRU initiative, midwest center for structural genomics, MCSG; 1.20A {Enterococcus faecalis} SCOP: d.145.1.4
Probab=27.11 E-value=49 Score=25.09 Aligned_cols=46 Identities=11% Similarity=0.200 Sum_probs=34.2
Q ss_pred ccCcEeecCCHHHHHHHHHHHhcCCCCCCCCCChhHHHHHHHHHHhhCCCC
Q 012222 198 VEGILRQAADVEEVDRRVQEYEQGKTEFSADEDAHVIGDCVKHVLRELPSS 248 (468)
Q Consensus 198 ~eGIFR~~g~~~~v~~l~~~~~~g~~~~~~~~d~~~va~llK~fLr~LP~p 248 (468)
.+|-|++.|... +..+.+.|.-. ++ ..+..+++|++-.-|..+|..
T Consensus 14 ~dg~~~v~G~~~-l~dl~~~l~~~---l~-~~~~~TlgG~i~~~lg~iP~~ 59 (93)
T 2r2z_A 14 ADNEYLVQGRML-IDEFNEVFETD---LH-MSDVDTMAGYLITALGTIPDE 59 (93)
T ss_dssp ETTEEEEETTSB-HHHHHHHHTCC---CC-CTTCCBHHHHHHHHHSSCCCT
T ss_pred CCCEEEEECCCC-HHHHHHHhCCC---CC-CCCcccHHHHHHHHhCCCCCC
Confidence 368899998754 66777777642 22 346889999999999999864
No 129
>2rk5_A Putative hemolysin; structural genomics, PSI-2, MCSG, protein structure initiative, midwest center for structural genomics, membrane; 1.50A {Streptococcus mutans UA159} SCOP: d.145.1.4
Probab=26.98 E-value=49 Score=24.77 Aligned_cols=46 Identities=9% Similarity=0.177 Sum_probs=33.9
Q ss_pred ccCcEeecCCHHHHHHHHHHHhcCCCCCCCCCChhHHHHHHHHHHhhCCCC
Q 012222 198 VEGILRQAADVEEVDRRVQEYEQGKTEFSADEDAHVIGDCVKHVLRELPSS 248 (468)
Q Consensus 198 ~eGIFR~~g~~~~v~~l~~~~~~g~~~~~~~~d~~~va~llK~fLr~LP~p 248 (468)
.+|-|.+.|... ++.+.+.++-. ++ ..+..++|+++-.-|..+|..
T Consensus 6 ~dg~~~v~G~~~-l~dl~~~l~~~---l~-~~~~dTl~G~v~~~lg~iP~~ 51 (87)
T 2rk5_A 6 ADNTYIVLGTMT-LNDFNEYFETD---LE-SDNVDTIAGFYLTGVGTIPSQ 51 (87)
T ss_dssp ETTEEEEETTSB-HHHHHHHHTCC---CC-CTTCCBHHHHHHHHHCSCCCS
T ss_pred CCCEEEEEccCC-HHHHHHHhCCC---CC-CCCcccHHHHHHHHhCcCCCC
Confidence 367899988754 66777777642 22 346889999999999999863
No 130
>2pli_A Uncharacterized protein; CORC-associated region, MCSG, PSI2, structural genomics, Pro structure initiative; 1.70A {Neisseria meningitidis} SCOP: d.145.1.4
Probab=26.63 E-value=48 Score=25.11 Aligned_cols=46 Identities=26% Similarity=0.320 Sum_probs=34.1
Q ss_pred ccCcEeecCCHHHHHHHHHHHhcCCCCCCCCCChhHHHHHHHHHHhhCCCC
Q 012222 198 VEGILRQAADVEEVDRRVQEYEQGKTEFSADEDAHVIGDCVKHVLRELPSS 248 (468)
Q Consensus 198 ~eGIFR~~g~~~~v~~l~~~~~~g~~~~~~~~d~~~va~llK~fLr~LP~p 248 (468)
.+|-|.+.|... +..+.+.++-. ++ ..+..+++|++-.-|..+|..
T Consensus 16 ~dg~~~v~G~~~-l~dl~~~l~~~---l~-~~~~dTlgG~i~~~lg~iP~~ 61 (91)
T 2pli_A 16 SSERWRIHAATE-IEDINTFFGTE---YS-SEEADTIGGLVIQELGHLPVR 61 (91)
T ss_dssp ETTEEEEETTCB-HHHHHHHHCCC---CC-CSSCCBHHHHHHHHHSSCCCT
T ss_pred CCCEEEEEcCCC-HHHHHHHhCCC---CC-CCCCccHHHHHHHHhCCCCCC
Confidence 368899988754 66677777642 22 346889999999999999864
No 131
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=26.35 E-value=1e+02 Score=29.92 Aligned_cols=100 Identities=10% Similarity=0.102 Sum_probs=56.6
Q ss_pred HHHHHHHHHHhcCCCCCCCCCChhHHHHHHHHHHhhCCCCCCCh-hhHHHHHHHHhcCCHHHHHHHHHHHHHhcCChhHH
Q 012222 209 EEVDRRVQEYEQGKTEFSADEDAHVIGDCVKHVLRELPSSPVPA-SCCTALLEAYKIDRKEARISAMRSAILETFPEPNR 287 (468)
Q Consensus 209 ~~v~~l~~~~~~g~~~~~~~~d~~~va~llK~fLr~LP~pLl~~-~~~~~~~~~~~~~~~~~~i~~l~~li~~~LP~~n~ 287 (468)
.+|+.|++.++.... ...++|.....++.+||.--.-.-.. ..|.++. .+.+.++.-|++-|..++| |.
T Consensus 67 ~rIe~L~~~L~~~s~---s~~~~~~y~~~~~~~lk~~~~q~~dndn~~~e~s-----~eLe~~i~~lk~~V~~q~~--~i 136 (390)
T 1deq_A 67 SRINKLRDSLFNYQK---NSKDSNTLTKNIVELMRGDFAKANNNDNTFKQIN-----EDLRSRIEILRRKVIEQVQ--RI 136 (390)
T ss_pred HHHHHHHHHHHHHHH---hhhHHHHHHHHHHHHHHHHHHhhccchHHHHHHH-----HHHHHHHHHHHHHHHHHhH--HH
Confidence 456666666664321 12466777777777776532111111 1222222 2346778888888888888 88
Q ss_pred HHHHHHHHHHHHHHhhhccCCCCccccchhccccccC
Q 012222 288 RLLQRILRMMHTISSHAHENRMTPSAVAACMAPLLLR 324 (468)
Q Consensus 288 ~~L~~L~~~L~~V~~~s~~NkM~~~nLA~vfaP~Ll~ 324 (468)
.+|+..+..++.-.+.=++ .+-+|++||---
T Consensus 137 r~Lq~~l~~q~~kiqRLE~------~Id~c~~~C~~s 167 (390)
T 1deq_A 137 NLLQKNVRDQLVDMKRLEV------DIDIKIRSCKGS 167 (390)
T ss_pred HHHHHHHHHHHHHHHHHHH------HHHHHhcccccc
Confidence 8888887766554443221 126677776544
No 132
>3lae_A UPF0053 protein HI0107; APC85784.2, conserved protein, haemophilus influenzae RD KW20, structural genomics, PSI-2; HET: MSE; 1.45A {Haemophilus influenzae} SCOP: d.145.1.4 PDB: 2o1r_A*
Probab=26.27 E-value=41 Score=24.85 Aligned_cols=46 Identities=15% Similarity=0.270 Sum_probs=34.6
Q ss_pred ccCcEeecCCHHHHHHHHHHHhcCCCCCCCCCChhHHHHHHHHHHhhCCCC
Q 012222 198 VEGILRQAADVEEVDRRVQEYEQGKTEFSADEDAHVIGDCVKHVLRELPSS 248 (468)
Q Consensus 198 ~eGIFR~~g~~~~v~~l~~~~~~g~~~~~~~~d~~~va~llK~fLr~LP~p 248 (468)
.+|-|.++|... ++.+.+.|+-. + +..+..++++++-..|..+|..
T Consensus 7 ~dg~~~v~g~~~-l~dl~~~l~~~---l-~~~~~~Tl~G~i~~~lg~iP~~ 52 (81)
T 3lae_A 7 SDGSMIIDGSAN-LRDLNKMFNWE---L-DTEDARTFNGLILEHLEEIPDE 52 (81)
T ss_dssp TTSCEEEETTCB-HHHHHHHHCCC---C-CCSSCSBHHHHHHHHCSSCCCT
T ss_pred CCCEEEEEeeCC-HHHHHHHhCCC---C-CCCCCccHHHHHHHHhCCCCCC
Confidence 468899998765 66777777643 2 2357789999999999998863
No 133
>2p3h_A Uncharacterized CBS domain-containing protein; structural genomics, CORC_HLYC, PFAM03471, putative transpor protein; 1.80A {Corynebacterium glutamicum} SCOP: d.145.1.4
Probab=25.89 E-value=52 Score=25.66 Aligned_cols=46 Identities=11% Similarity=0.047 Sum_probs=34.4
Q ss_pred ccCcEeecCCHHHHHHHHHHHhcCCCCCCCCCChhHHHHHHHHHHhhCCCC
Q 012222 198 VEGILRQAADVEEVDRRVQEYEQGKTEFSADEDAHVIGDCVKHVLRELPSS 248 (468)
Q Consensus 198 ~eGIFR~~g~~~~v~~l~~~~~~g~~~~~~~~d~~~va~llK~fLr~LP~p 248 (468)
.+|-|++.|... ++.+.+.|+-. +. ..+..+++|++-..|..+|..
T Consensus 10 ~dg~~~v~G~~~-l~dl~~~lg~~---l~-~e~~dTlgGli~~~lg~iP~~ 55 (101)
T 2p3h_A 10 SPDKWLIDGDTP-LDEVERAIGYE---LP-EGDYETISGLLFDHANALLKT 55 (101)
T ss_dssp ETTEEEEETTCB-HHHHHHHHTSC---CC-CSSCCBHHHHHHHHHCSCCCT
T ss_pred CCCEEEEEccCC-HHHHHHHhCCC---CC-CCCCccHHHHHHHHhCCCCCC
Confidence 368899988754 66777777642 22 357889999999999999864
No 134
>2p13_A CBS domain; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; 1.65A {Nitrosomonas europaea} SCOP: d.145.1.4
Probab=25.30 E-value=56 Score=24.60 Aligned_cols=47 Identities=11% Similarity=0.225 Sum_probs=34.6
Q ss_pred ccCcEeecCCHHHHHHHHHHHhcCCCCCCCC-CChhHHHHHHHHHHhhCCCC
Q 012222 198 VEGILRQAADVEEVDRRVQEYEQGKTEFSAD-EDAHVIGDCVKHVLRELPSS 248 (468)
Q Consensus 198 ~eGIFR~~g~~~~v~~l~~~~~~g~~~~~~~-~d~~~va~llK~fLr~LP~p 248 (468)
.+|-|.+.|... +..+.+.|+-. ++.. .+..+++|++-..|..+|..
T Consensus 13 ~dg~~~v~G~~~-l~dl~~~l~~~---l~~~~~~~~TlgG~i~~~lg~iP~~ 60 (90)
T 2p13_A 13 ADGTWLMDGWIS-IRKASNLLEHD---LVDEAERYSTLGGYLLWQFGYIPAA 60 (90)
T ss_dssp TTSCEEEETTSB-HHHHHHHHTSC---CCCTTCCCCBHHHHHHHHHSSCCCT
T ss_pred CCCEEEEECcCC-HHHHHHHHCCC---CCCcCCCCccHHHHHHHHhCCCCCC
Confidence 468899988754 66777777642 2221 46889999999999999864
No 135
>2pls_A CBS domain protein; APC86064.2, CORC/HLYC transporter associated domain, CBS DOM protein, structural genomics, PSI-2 structure initiative; 2.15A {Chlorobium tepidum tls} SCOP: d.145.1.4
Probab=25.22 E-value=59 Score=24.24 Aligned_cols=48 Identities=13% Similarity=0.153 Sum_probs=34.5
Q ss_pred ccCcEeecCCHHHHHHHHHHHhcCCCCCCCC--CChhHHHHHHHHHHhhCCCC
Q 012222 198 VEGILRQAADVEEVDRRVQEYEQGKTEFSAD--EDAHVIGDCVKHVLRELPSS 248 (468)
Q Consensus 198 ~eGIFR~~g~~~~v~~l~~~~~~g~~~~~~~--~d~~~va~llK~fLr~LP~p 248 (468)
.+|-|.+.|... +..+.+.|+-.. ++.. .+..++++++-.-|..+|..
T Consensus 7 ~dg~~~v~G~~~-l~dl~~~l~~~~--l~~~~~~~~~Tl~G~i~~~lg~iP~~ 56 (86)
T 2pls_A 7 EDGSWLLDGLIA-VPELKDTLGLRA--VPEEEKGVYHTLSGMIMWLLGRLPQT 56 (86)
T ss_dssp TTSCEEEETTCB-HHHHHHHHTCSC--CTTTTSCSCCBHHHHHHHHHTSCCCT
T ss_pred CCCeEEEEcccC-HHHHHHHhCCCc--CCCccCCCcccHHHHHHHHhCCCCCC
Confidence 468899988754 667777776420 2221 46889999999999999864
No 136
>2p4p_A Hypothetical protein HD1797; CORC_HLYC, PFAM: PF03471, structural GE PSI-2, protein structure initiative, midwest center for STR genomics; HET: MLY MSE; 1.80A {Haemophilus ducreyi} SCOP: d.145.1.4
Probab=22.48 E-value=67 Score=23.91 Aligned_cols=48 Identities=19% Similarity=0.299 Sum_probs=34.8
Q ss_pred ccCcEeecCCHHHHHHHHHHHhcCCCCCCCCCChhHHHHHHHHHHhhCCCC
Q 012222 198 VEGILRQAADVEEVDRRVQEYEQGKTEFSADEDAHVIGDCVKHVLRELPSS 248 (468)
Q Consensus 198 ~eGIFR~~g~~~~v~~l~~~~~~g~~~~~~~~d~~~va~llK~fLr~LP~p 248 (468)
.+|-|.+.|... +..+.+.|+-. .++.+.+..+++|++-.-|..+|..
T Consensus 7 ~dg~~~v~G~~~-l~dl~~~l~~~--~l~~~~~~~Tl~G~i~~~lg~iP~~ 54 (86)
T 2p4p_A 7 NEDSWLIDGATP-LEDVMRALNIH--TFPRDENYETIGGFMMYMLRXIPXX 54 (86)
T ss_dssp CCSEEEEETTSB-HHHHHHHTTCC--CSCCSCSSCBHHHHHHHHHCSCCCT
T ss_pred CCCEEEEEccCC-HHHHHHHhCCC--CCCcCCCCccHHHHHHHHhCCCCCC
Confidence 578899998754 56676666532 1332356889999999999999874
No 137
>2oai_A Hemolysin; PFAM03471, xylella fastidiosa temecula1, structur genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; HET: MLY; 1.80A {Xylella fastidiosa} SCOP: d.145.1.4 PDB: 2r8d_A*
Probab=21.61 E-value=58 Score=24.82 Aligned_cols=47 Identities=6% Similarity=0.171 Sum_probs=32.9
Q ss_pred ccCcEeecCCHHHHHHHHHHHhcCCCCCCCC--CChhHHHHHHHHHHhhCCCC
Q 012222 198 VEGILRQAADVEEVDRRVQEYEQGKTEFSAD--EDAHVIGDCVKHVLRELPSS 248 (468)
Q Consensus 198 ~eGIFR~~g~~~~v~~l~~~~~~g~~~~~~~--~d~~~va~llK~fLr~LP~p 248 (468)
.+|-|.+.|... +..+.+.|.-. ++.. .+..+++|++-..|..+|..
T Consensus 16 ~dg~~~v~G~~~-l~dl~~~l~~~---l~~~~~~~~dTlgG~i~~~lg~iP~~ 64 (94)
T 2oai_A 16 EDGSFLIDGTLP-IEELREVLGAE---LPDGEENNYHTLAGMCISYFGRIPHV 64 (94)
T ss_dssp TTSCEEEETTCB-HHHHHHHHTC----------CCCSBHHHHHHHHHSSCCCT
T ss_pred CCCeEEEeccCC-HHHHHHHhCCC---CCcccCCCCccHHHHHHHHhCCCCCC
Confidence 468899988654 66677776642 2221 46789999999999999864
Done!