Query 012224
Match_columns 468
No_of_seqs 467 out of 4640
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 05:12:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012224.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012224hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ogq_A PGIP-2, polygalacturona 100.0 1.7E-31 5.9E-36 260.2 14.6 218 24-246 3-235 (313)
2 3rgz_A Protein brassinosteroid 100.0 1E-28 3.4E-33 269.2 16.5 213 24-245 9-260 (768)
3 4eco_A Uncharacterized protein 99.9 2E-28 6.7E-33 261.2 11.0 216 26-245 29-366 (636)
4 4ecn_A Leucine-rich repeat pro 99.9 9E-28 3.1E-32 261.9 12.3 212 25-245 267-608 (876)
5 4fcg_A Uncharacterized protein 99.9 1.2E-27 4E-32 234.7 9.6 217 24-246 24-267 (328)
6 3rgz_A Protein brassinosteroid 99.9 2.2E-23 7.6E-28 227.0 12.5 175 71-247 467-719 (768)
7 2o6q_A Variable lymphocyte rec 99.9 3.8E-21 1.3E-25 182.9 19.5 170 71-242 38-215 (270)
8 1ogq_A PGIP-2, polygalacturona 99.9 1.3E-22 4.5E-27 197.4 8.7 172 70-244 76-256 (313)
9 2o6s_A Variable lymphocyte rec 99.9 7E-22 2.4E-26 180.4 12.9 176 57-236 6-190 (208)
10 3oja_A Leucine-rich immune mol 99.9 1.8E-23 6.1E-28 215.8 -2.2 169 71-246 35-228 (487)
11 3m19_A Variable lymphocyte rec 99.9 9.5E-21 3.2E-25 178.2 16.2 183 56-246 3-193 (251)
12 4fcg_A Uncharacterized protein 99.8 8.4E-21 2.9E-25 185.8 13.0 173 70-248 104-293 (328)
13 3e6j_A Variable lymphocyte rec 99.8 2.8E-20 9.7E-25 172.5 15.9 153 54-228 15-176 (229)
14 1ozn_A Reticulon 4 receptor; N 99.8 1.6E-19 5.4E-24 172.9 17.6 176 69-246 31-215 (285)
15 2v70_A SLIT-2, SLIT homolog 2 99.8 1.2E-19 4.1E-24 167.2 13.8 150 58-228 11-170 (220)
16 2v9t_B SLIT homolog 2 protein 99.8 2.9E-19 1E-23 164.6 14.9 149 57-226 10-167 (220)
17 3rfs_A Internalin B, repeat mo 99.8 1.4E-19 4.7E-24 172.3 12.8 155 70-228 63-222 (272)
18 1ozn_A Reticulon 4 receptor; N 99.8 3.3E-19 1.1E-23 170.8 15.4 176 69-246 55-239 (285)
19 2z66_A Variable lymphocyte rec 99.8 1.1E-19 3.9E-24 175.8 12.2 188 57-247 6-214 (306)
20 3v47_A TOLL-like receptor 5B a 99.8 6.7E-20 2.3E-24 187.2 10.0 150 56-206 6-168 (455)
21 3zyi_A Leucine-rich repeat-con 99.8 5.7E-19 2E-23 180.4 16.6 185 60-245 56-255 (452)
22 4eco_A Uncharacterized protein 99.8 3.7E-20 1.3E-24 197.3 7.5 174 69-247 205-417 (636)
23 3zyj_A Leucine-rich repeat-con 99.8 8.7E-19 3E-23 178.4 17.4 185 60-245 45-244 (440)
24 1p9a_G Platelet glycoprotein I 99.8 1.2E-18 4.1E-23 167.5 16.0 170 70-245 31-208 (290)
25 1wwl_A Monocyte differentiatio 99.8 6E-20 2.1E-24 178.4 6.2 174 70-246 95-288 (312)
26 2z66_A Variable lymphocyte rec 99.8 3.9E-19 1.3E-23 171.9 11.9 174 70-246 78-262 (306)
27 3rfs_A Internalin B, repeat mo 99.8 2.6E-18 9E-23 163.4 17.0 174 70-249 41-222 (272)
28 2z62_A TOLL-like receptor 4, v 99.8 6.5E-19 2.2E-23 167.9 12.7 133 71-205 29-162 (276)
29 2z62_A TOLL-like receptor 4, v 99.8 9.9E-19 3.4E-23 166.6 13.7 179 69-249 51-241 (276)
30 2ft3_A Biglycan; proteoglycan, 99.8 4.7E-18 1.6E-22 166.4 18.0 183 58-246 33-231 (332)
31 2z81_A CD282 antigen, TOLL-lik 99.8 3.3E-19 1.1E-23 186.5 10.2 187 57-246 3-210 (549)
32 3oja_B Anopheles plasmodium-re 99.8 1.4E-18 4.7E-23 183.8 14.8 110 71-180 76-185 (597)
33 2xot_A Amphoterin-induced prot 99.8 4.7E-19 1.6E-23 175.7 10.4 172 58-247 18-204 (361)
34 4glp_A Monocyte differentiatio 99.8 2.1E-18 7.3E-23 167.2 14.7 174 71-246 92-286 (310)
35 2id5_A Lingo-1, leucine rich r 99.8 3.4E-18 1.2E-22 175.8 16.3 172 60-233 13-198 (477)
36 4ecn_A Leucine-rich repeat pro 99.8 3.8E-19 1.3E-23 194.1 9.2 172 69-246 447-658 (876)
37 2v70_A SLIT-2, SLIT homolog 2 99.8 6.2E-18 2.1E-22 155.7 15.0 151 74-248 15-169 (220)
38 1xku_A Decorin; proteoglycan, 99.8 6.1E-18 2.1E-22 165.4 15.7 171 57-232 30-213 (330)
39 3vq2_A TLR4, TOLL-like recepto 99.8 1.8E-18 6E-23 183.2 12.6 174 69-244 31-216 (606)
40 2z80_A TOLL-like receptor 2, v 99.8 1.1E-18 3.7E-23 172.4 10.0 187 55-246 27-236 (353)
41 4g8a_A TOLL-like receptor 4; l 99.8 1.5E-18 5.2E-23 184.1 11.8 135 70-206 52-187 (635)
42 3j0a_A TOLL-like receptor 5; m 99.8 3.8E-18 1.3E-22 187.6 15.2 85 71-155 291-375 (844)
43 2xwt_C Thyrotropin receptor; s 99.8 3.5E-18 1.2E-22 159.3 12.1 174 70-247 31-220 (239)
44 1w8a_A SLIT protein; signaling 99.8 8E-18 2.7E-22 151.5 13.8 131 74-228 12-143 (192)
45 3j0a_A TOLL-like receptor 5; m 99.8 6.8E-18 2.3E-22 185.6 16.1 189 57-248 13-220 (844)
46 3m19_A Variable lymphocyte rec 99.7 1.2E-17 4.1E-22 156.9 15.2 156 70-227 35-195 (251)
47 1wwl_A Monocyte differentiatio 99.7 2E-19 6.9E-24 174.7 3.0 174 72-246 65-267 (312)
48 3v47_A TOLL-like receptor 5B a 99.7 5.5E-18 1.9E-22 173.0 13.7 176 70-247 103-386 (455)
49 3cvr_A Invasion plasmid antige 99.7 3.7E-18 1.3E-22 178.2 12.5 118 48-184 34-157 (571)
50 3o6n_A APL1; leucine-rich repe 99.7 6.3E-18 2.2E-22 169.2 13.6 151 71-224 46-199 (390)
51 3zyj_A Leucine-rich repeat-con 99.7 1.2E-17 4.2E-22 170.0 15.8 157 70-230 88-250 (440)
52 3a79_B TLR6, VLRB.59, TOLL-lik 99.7 4.6E-18 1.6E-22 178.6 12.9 153 91-248 350-513 (562)
53 2xwt_C Thyrotropin receptor; s 99.7 6.7E-18 2.3E-22 157.3 12.6 169 69-242 54-236 (239)
54 3vq2_A TLR4, TOLL-like recepto 99.7 5.5E-18 1.9E-22 179.4 13.3 173 70-245 350-534 (606)
55 3t6q_A CD180 antigen; protein- 99.7 6.5E-18 2.2E-22 178.9 13.7 160 70-232 33-200 (606)
56 1w8a_A SLIT protein; signaling 99.7 4.3E-18 1.5E-22 153.3 10.5 127 57-183 7-143 (192)
57 2v9t_B SLIT homolog 2 protein 99.7 1.8E-17 6.1E-22 152.6 14.9 150 73-246 14-166 (220)
58 3zyi_A Leucine-rich repeat-con 99.7 1.7E-17 5.8E-22 169.5 16.2 159 69-231 98-262 (452)
59 1ziw_A TOLL-like receptor 3; i 99.7 1.4E-17 4.7E-22 178.8 15.1 162 70-233 25-193 (680)
60 2o6q_A Variable lymphocyte rec 99.7 4.6E-17 1.6E-21 154.6 17.0 157 70-228 61-222 (270)
61 2z7x_B TOLL-like receptor 1, v 99.7 2.6E-18 8.9E-23 178.6 9.1 171 71-245 248-457 (520)
62 3e6j_A Variable lymphocyte rec 99.7 4.1E-17 1.4E-21 151.1 16.3 159 60-248 14-175 (229)
63 3t6q_A CD180 antigen; protein- 99.7 1.3E-17 4.6E-22 176.4 14.5 175 70-246 325-514 (606)
64 2z80_A TOLL-like receptor 2, v 99.7 8.3E-18 2.8E-22 166.1 11.6 133 69-204 75-210 (353)
65 4b8c_D Glucose-repressible alc 99.7 2.4E-18 8.1E-23 185.6 7.7 201 26-234 131-364 (727)
66 4ezg_A Putative uncharacterize 99.7 1.4E-17 4.7E-22 150.6 10.9 110 70-183 44-153 (197)
67 2o6r_A Variable lymphocyte rec 99.7 1.9E-17 6.4E-22 146.9 11.4 127 57-183 6-141 (177)
68 1p9a_G Platelet glycoprotein I 99.7 8.4E-17 2.9E-21 154.5 16.1 170 69-246 9-186 (290)
69 1ziw_A TOLL-like receptor 3; i 99.7 1.8E-17 6.2E-22 177.9 11.7 111 71-181 50-160 (680)
70 2z7x_B TOLL-like receptor 1, v 99.7 4.5E-17 1.6E-21 169.2 13.0 171 71-248 303-484 (520)
71 2id5_A Lingo-1, leucine rich r 99.7 3.9E-17 1.3E-21 167.9 12.3 177 70-246 80-286 (477)
72 4gt4_A Tyrosine-protein kinase 99.7 3.3E-18 1.1E-22 165.3 3.8 91 360-455 28-124 (308)
73 2o6s_A Variable lymphocyte rec 99.7 3.5E-16 1.2E-20 142.4 17.0 151 73-228 10-165 (208)
74 4glp_A Monocyte differentiatio 99.7 2.1E-17 7.2E-22 160.2 9.1 177 69-246 116-308 (310)
75 2ell_A Acidic leucine-rich nuc 99.7 2.2E-17 7.5E-22 145.1 8.2 138 70-228 24-163 (168)
76 3a79_B TLR6, VLRB.59, TOLL-lik 99.7 8.8E-17 3E-21 168.8 14.0 155 69-228 352-514 (562)
77 1xku_A Decorin; proteoglycan, 99.7 1.7E-16 5.8E-21 155.1 15.1 169 70-247 100-278 (330)
78 2ft3_A Biglycan; proteoglycan, 99.7 1.2E-16 4.2E-21 156.2 14.1 168 69-245 77-254 (332)
79 2z63_A TOLL-like receptor 4, v 99.7 6.2E-17 2.1E-21 169.9 12.4 177 70-249 347-535 (570)
80 3o53_A Protein LRIM1, AGAP0063 99.7 1.6E-17 5.5E-22 161.6 6.9 165 70-246 58-228 (317)
81 2z81_A CD282 antigen, TOLL-lik 99.7 5.6E-17 1.9E-21 169.6 11.2 156 69-226 49-211 (549)
82 2je0_A Acidic leucine-rich nuc 99.7 2E-17 6.9E-22 142.3 5.0 111 70-182 17-129 (149)
83 1h6u_A Internalin H; cell adhe 99.7 2.1E-16 7.2E-21 153.0 12.6 165 70-246 63-231 (308)
84 2z63_A TOLL-like receptor 4, v 99.7 1.2E-16 4.2E-21 167.6 11.5 172 69-242 27-210 (570)
85 2wfh_A SLIT homolog 2 protein 99.7 7E-16 2.4E-20 138.9 14.8 128 74-226 14-141 (193)
86 4aoj_A High affinity nerve gro 99.7 1.2E-16 4.1E-21 155.7 10.2 86 364-455 47-138 (329)
87 2o6r_A Variable lymphocyte rec 99.7 8E-16 2.7E-20 136.3 14.6 132 73-228 10-141 (177)
88 2wfh_A SLIT homolog 2 protein 99.7 2.8E-16 9.4E-21 141.5 11.5 123 57-180 9-140 (193)
89 3oja_B Anopheles plasmodium-re 99.7 2.8E-16 9.7E-21 166.1 13.2 175 70-246 51-246 (597)
90 4asz_A BDNF/NT-3 growth factor 99.7 1.2E-16 4.1E-21 153.6 9.2 85 364-454 19-109 (299)
91 3oja_A Leucine-rich immune mol 99.7 1.2E-16 3.9E-21 164.8 9.4 156 70-233 99-260 (487)
92 1h6u_A Internalin H; cell adhe 99.7 8.1E-16 2.8E-20 148.9 14.8 165 70-246 41-209 (308)
93 4b8c_D Glucose-repressible alc 99.7 2.3E-17 8E-22 177.8 4.3 147 69-221 223-369 (727)
94 3cvr_A Invasion plasmid antige 99.7 6.8E-16 2.3E-20 161.1 15.1 153 70-245 80-243 (571)
95 1jl5_A Outer protein YOPM; leu 99.7 5.9E-17 2E-21 165.5 6.8 164 71-245 12-228 (454)
96 3bz5_A Internalin-J, INLJ; leu 99.7 1.5E-15 5.2E-20 155.2 16.6 160 71-246 65-226 (457)
97 3o6n_A APL1; leucine-rich repe 99.6 7.7E-16 2.6E-20 154.0 13.2 172 70-247 69-241 (390)
98 3bz5_A Internalin-J, INLJ; leu 99.6 2.6E-15 8.8E-20 153.4 16.6 162 69-247 84-248 (457)
99 4ay9_X Follicle-stimulating ho 99.6 6.3E-16 2.2E-20 152.5 11.7 190 58-247 9-217 (350)
100 1jl5_A Outer protein YOPM; leu 99.6 2.1E-15 7.1E-20 154.0 15.6 156 71-245 112-270 (454)
101 2xot_A Amphoterin-induced prot 99.6 1.9E-15 6.6E-20 149.6 14.5 150 74-247 22-178 (361)
102 3g06_A SSPH2 (leucine-rich rep 99.6 4.3E-16 1.5E-20 164.5 9.8 178 47-244 12-213 (622)
103 1h6t_A Internalin B; cell adhe 99.6 1.2E-15 4.1E-20 146.5 12.0 159 71-243 47-211 (291)
104 1o6v_A Internalin A; bacterial 99.6 1.6E-15 5.6E-20 155.4 13.2 147 71-228 200-370 (466)
105 3omv_A RAF proto-oncogene seri 99.6 3.7E-16 1.3E-20 150.5 7.7 93 364-463 42-134 (307)
106 1h6t_A Internalin B; cell adhe 99.6 1.9E-15 6.4E-20 145.2 12.5 145 70-226 68-215 (291)
107 1dce_A Protein (RAB geranylger 99.6 1E-15 3.5E-20 160.2 10.0 109 71-184 442-551 (567)
108 1m9s_A Internalin B; cell inva 99.6 3.6E-15 1.2E-19 157.1 13.4 146 69-226 64-212 (605)
109 3o53_A Protein LRIM1, AGAP0063 99.6 7.9E-16 2.7E-20 149.6 7.8 159 70-236 99-263 (317)
110 2je0_A Acidic leucine-rich nuc 99.6 9.9E-16 3.4E-20 131.7 7.2 123 92-237 15-142 (149)
111 4fmz_A Internalin; leucine ric 99.6 4.3E-15 1.5E-19 145.9 12.8 166 70-247 155-326 (347)
112 4g8a_A TOLL-like receptor 4; l 99.6 4E-15 1.4E-19 157.7 13.1 135 71-226 446-582 (635)
113 3g39_A Variable lymphocyte rec 99.6 6E-15 2.1E-19 129.9 12.0 107 74-183 13-119 (170)
114 2ell_A Acidic leucine-rich nuc 99.6 3.3E-15 1.1E-19 131.1 9.9 130 91-242 21-157 (168)
115 1xeu_A Internalin C; cellular 99.6 5.8E-15 2E-19 139.6 12.3 144 70-226 41-187 (263)
116 1m9s_A Internalin B; cell inva 99.6 3.5E-15 1.2E-19 157.2 11.7 163 70-246 43-211 (605)
117 1o6v_A Internalin A; bacterial 99.6 7.5E-15 2.6E-19 150.4 12.4 144 70-225 243-389 (466)
118 2r9u_A Variable lymphocyte rec 99.6 1.2E-14 4.2E-19 128.4 12.1 106 73-181 15-120 (174)
119 2ca6_A RAN GTPase-activating p 99.6 8.1E-17 2.8E-21 161.0 -2.7 89 91-179 91-200 (386)
120 4fmz_A Internalin; leucine ric 99.6 1.1E-14 3.7E-19 143.1 12.5 166 69-246 131-301 (347)
121 4b9d_A Serine/threonine-protei 99.6 6.6E-15 2.3E-19 143.9 10.0 88 364-455 30-118 (350)
122 2ast_B S-phase kinase-associat 99.6 1.7E-16 5.7E-21 155.3 -2.0 170 70-242 70-257 (336)
123 3fpq_A Serine/threonine-protei 99.5 7E-15 2.4E-19 140.4 8.8 89 364-454 32-123 (290)
124 1xeu_A Internalin C; cellular 99.5 1.2E-14 4.3E-19 137.3 10.2 160 71-245 20-185 (263)
125 3goz_A Leucine-rich repeat-con 99.5 5.8E-16 2E-20 153.4 0.9 177 70-246 22-239 (362)
126 2ca6_A RAN GTPase-activating p 99.5 2.4E-16 8E-21 157.6 -2.0 177 70-246 32-258 (386)
127 4ezg_A Putative uncharacterize 99.5 1.1E-14 3.8E-19 131.3 8.9 130 70-225 66-195 (197)
128 1a9n_A U2A', U2A'; complex (nu 99.5 6.1E-15 2.1E-19 130.5 6.9 131 70-224 19-153 (176)
129 3hmm_A TGF-beta receptor type- 99.5 6.3E-15 2.2E-19 142.2 7.4 85 364-454 9-95 (303)
130 3g06_A SSPH2 (leucine-rich rep 99.5 7.7E-14 2.6E-18 147.2 16.3 160 71-245 82-274 (622)
131 2ast_B S-phase kinase-associat 99.5 9.2E-16 3.1E-20 150.0 1.2 171 70-242 93-282 (336)
132 3goz_A Leucine-rich repeat-con 99.5 6.2E-16 2.1E-20 153.2 -0.5 158 71-228 52-242 (362)
133 1ds9_A Outer arm dynein; leuci 99.5 2E-17 6.8E-22 149.6 -10.5 134 71-229 19-158 (198)
134 4g31_A Eukaryotic translation 99.5 2.6E-14 8.8E-19 137.5 10.3 89 364-455 11-110 (299)
135 4aw0_A HPDK1, 3-phosphoinositi 99.5 9.4E-15 3.2E-19 140.5 6.8 88 364-454 38-126 (311)
136 3g39_A Variable lymphocyte rec 99.5 8.8E-14 3E-18 122.4 12.4 109 96-228 11-119 (170)
137 4fih_A Serine/threonine-protei 99.5 1.5E-14 5.3E-19 141.1 7.8 85 364-454 80-165 (346)
138 2ifg_A High affinity nerve gro 99.5 4.5E-14 1.5E-18 138.8 10.8 108 58-180 8-117 (347)
139 1dce_A Protein (RAB geranylger 99.5 6.1E-14 2.1E-18 146.8 11.2 58 120-180 443-500 (567)
140 4fie_A Serine/threonine-protei 99.5 2.6E-14 9E-19 143.0 7.9 85 364-454 157-242 (423)
141 2r9u_A Variable lymphocyte rec 99.5 2.2E-13 7.7E-18 120.2 12.5 108 96-227 14-121 (174)
142 4g3f_A NF-kappa-beta-inducing 99.5 5.4E-14 1.9E-18 136.8 6.7 80 364-454 64-144 (336)
143 3hyh_A Carbon catabolite-derep 99.4 1.9E-13 6.7E-18 129.3 8.4 87 364-454 19-106 (275)
144 4ase_A Vascular endothelial gr 99.4 1.5E-13 5.2E-18 135.0 7.9 88 364-455 70-164 (353)
145 1a9n_A U2A', U2A'; complex (nu 99.4 1.8E-13 6.3E-18 120.9 6.5 106 70-179 42-153 (176)
146 3ubd_A Ribosomal protein S6 ki 99.4 4.9E-14 1.7E-18 135.4 1.6 87 364-454 30-120 (304)
147 3uto_A Twitchin; kinase, muscl 99.4 5.1E-13 1.7E-17 139.9 8.4 89 364-458 163-252 (573)
148 2nru_A Interleukin-1 receptor- 99.4 1.4E-12 4.8E-17 125.6 10.2 105 347-454 12-124 (307)
149 1ds9_A Outer arm dynein; leuci 99.3 7.8E-15 2.7E-19 132.5 -7.1 110 70-184 48-158 (198)
150 3uim_A Brassinosteroid insensi 99.3 4.3E-13 1.5E-17 130.4 4.5 105 346-455 16-122 (326)
151 1z7x_W Ribonuclease inhibitor; 99.3 1.4E-14 4.9E-19 147.8 -6.4 174 71-244 29-239 (461)
152 2c30_A Serine/threonine-protei 99.3 3.1E-12 1.1E-16 124.3 10.5 101 348-454 23-136 (321)
153 1z7x_W Ribonuclease inhibitor; 99.3 2.5E-14 8.6E-19 145.9 -5.0 175 70-246 199-412 (461)
154 2ifg_A High affinity nerve gro 99.3 3.6E-12 1.2E-16 125.1 10.6 106 97-226 11-118 (347)
155 3s95_A LIMK-1, LIM domain kina 99.3 3.9E-12 1.3E-16 122.8 9.7 90 364-459 16-106 (310)
156 2qol_A Ephrin receptor; recept 99.3 1.6E-12 5.4E-17 129.2 6.4 93 364-461 51-147 (373)
157 4b99_A Mitogen-activated prote 99.3 3.7E-12 1.3E-16 127.2 9.1 88 364-454 60-152 (398)
158 2qkw_B Protein kinase; three-h 99.3 4.7E-13 1.6E-17 130.0 2.3 96 354-455 33-130 (321)
159 4hcu_A Tyrosine-protein kinase 99.3 4E-12 1.4E-16 120.0 8.6 89 364-459 16-104 (269)
160 3kul_A Ephrin type-A receptor 99.3 4.8E-12 1.6E-16 123.2 8.2 93 364-461 55-151 (325)
161 4aw2_A Serine/threonine-protei 99.3 1.2E-12 4E-17 132.7 3.4 104 351-457 65-171 (437)
162 2x4f_A Myosin light chain kina 99.3 5.1E-12 1.8E-16 125.5 7.9 87 364-456 95-182 (373)
163 3cbl_A C-FES, proto-oncogene t 99.3 2.4E-12 8.2E-17 128.1 5.0 92 364-460 120-212 (377)
164 3qd2_B Eukaryotic translation 99.3 2E-11 6.8E-16 118.5 11.2 89 364-455 12-156 (332)
165 3v5w_A G-protein coupled recep 99.3 7.5E-12 2.6E-16 131.3 8.6 92 360-454 189-286 (689)
166 3gen_A Tyrosine-protein kinase 99.3 7.5E-12 2.6E-16 119.0 7.8 89 364-459 30-118 (283)
167 3sxs_A Cytoplasmic tyrosine-pr 99.2 6.8E-12 2.3E-16 118.3 7.0 86 364-456 14-99 (268)
168 3ugc_A Tyrosine-protein kinase 99.2 6.4E-12 2.2E-16 120.3 6.1 92 364-459 16-112 (295)
169 3hko_A Calcium/calmodulin-depe 99.2 1.7E-11 5.7E-16 120.0 8.9 96 355-452 21-120 (345)
170 1tki_A Titin; serine kinase, m 99.2 1.3E-11 4.5E-16 119.9 8.0 89 364-459 11-100 (321)
171 4f9c_A Cell division cycle 7-r 99.2 7.4E-12 2.5E-16 123.6 6.1 81 364-452 27-112 (361)
172 2vd5_A DMPK protein; serine/th 99.2 3.2E-12 1.1E-16 128.5 3.4 102 351-455 52-156 (412)
173 1opk_A P150, C-ABL, proto-onco 99.2 9.5E-12 3.2E-16 128.3 6.5 84 364-454 226-310 (495)
174 4euu_A Serine/threonine-protei 99.2 2.4E-11 8E-16 117.8 8.9 89 364-455 15-104 (319)
175 3t9t_A Tyrosine-protein kinase 99.2 1.5E-11 5.2E-16 115.6 7.2 88 364-458 14-101 (267)
176 3p86_A Serine/threonine-protei 99.2 3.2E-11 1.1E-15 116.5 9.6 87 364-455 43-129 (309)
177 3fe3_A MAP/microtubule affinit 99.2 3.4E-11 1.2E-15 117.3 9.7 87 364-454 21-108 (328)
178 2yab_A Death-associated protei 99.2 4E-11 1.4E-15 118.4 10.3 89 364-454 18-109 (361)
179 3kmu_A ILK, integrin-linked ki 99.2 1.8E-11 6.3E-16 115.2 7.4 90 364-456 16-105 (271)
180 2y0a_A Death-associated protei 99.2 5.3E-11 1.8E-15 115.8 10.9 89 364-454 17-108 (326)
181 3v8s_A RHO-associated protein 99.2 5.9E-12 2E-16 126.5 4.2 98 354-454 63-163 (410)
182 3fxz_A Serine/threonine-protei 99.2 3.5E-11 1.2E-15 115.5 9.3 85 364-454 26-111 (297)
183 1kob_A Twitchin; kinase, intra 99.2 3.1E-11 1.1E-15 120.4 9.2 90 364-459 57-147 (387)
184 4ay9_X Follicle-stimulating ho 99.2 1.1E-10 3.7E-15 114.8 12.9 171 69-242 53-233 (350)
185 3c0i_A Peripheral plasma membr 99.2 3.1E-11 1.1E-15 118.7 9.0 88 364-453 30-119 (351)
186 3uqc_A Probable conserved tran 99.2 3.1E-11 1.1E-15 115.3 8.4 87 364-453 37-124 (286)
187 1qcf_A Haematopoetic cell kina 99.2 3.1E-11 1.1E-15 123.0 8.8 83 364-454 194-276 (454)
188 2ozo_A Tyrosine-protein kinase 99.2 2.6E-11 8.8E-16 128.3 8.4 92 365-462 343-437 (613)
189 2bdw_A Hypothetical protein K1 99.2 5.2E-11 1.8E-15 117.7 10.1 87 364-454 35-122 (362)
190 4fvq_A Tyrosine-protein kinase 99.2 2.2E-11 7.4E-16 116.1 7.1 89 364-458 14-110 (289)
191 3zgw_A Maternal embryonic leuc 99.2 3.2E-11 1.1E-15 118.4 8.5 86 364-454 16-102 (347)
192 2psq_A Fibroblast growth facto 99.2 3E-11 1E-15 119.8 8.2 87 364-455 87-182 (370)
193 4eqm_A Protein kinase; transfe 99.2 5.8E-11 2E-15 113.7 9.7 88 364-454 17-105 (294)
194 4e5w_A Tyrosine-protein kinase 99.2 3.1E-11 1.1E-15 115.7 7.2 93 364-459 27-124 (302)
195 1o6l_A RAC-beta serine/threoni 99.2 4.5E-11 1.6E-15 116.9 8.4 88 364-454 11-99 (337)
196 3a62_A Ribosomal protein S6 ki 99.2 2.7E-11 9.3E-16 117.9 6.8 89 364-454 23-115 (327)
197 3tki_A Serine/threonine-protei 99.2 4E-11 1.4E-15 116.6 7.9 86 364-454 13-99 (323)
198 3niz_A Rhodanese family protei 99.2 4.2E-11 1.4E-15 115.7 7.8 91 364-459 27-117 (311)
199 4eut_A Serine/threonine-protei 99.1 4.2E-11 1.4E-15 119.8 7.7 89 364-455 15-104 (396)
200 1fmk_A C-SRC, P60-SRC, tyrosin 99.1 4.2E-11 1.4E-15 122.1 7.7 82 364-453 190-271 (452)
201 3dtc_A Mitogen-activated prote 99.1 4E-11 1.4E-15 113.0 7.0 88 364-454 13-100 (271)
202 3cok_A Serine/threonine-protei 99.1 5.4E-11 1.8E-15 112.7 7.8 93 364-459 17-110 (278)
203 1fot_A TPK1 delta, CAMP-depend 99.1 6E-11 2.1E-15 115.1 8.3 88 364-454 12-100 (318)
204 1u59_A Tyrosine-protein kinase 99.1 7.4E-11 2.5E-15 112.4 8.7 91 364-460 16-109 (287)
205 1k9a_A Carboxyl-terminal SRC k 99.1 5.3E-11 1.8E-15 121.2 8.1 84 364-455 199-282 (450)
206 3vhe_A Vascular endothelial gr 99.1 2.5E-11 8.4E-16 119.5 5.4 94 359-456 21-123 (359)
207 1luf_A Muscle-specific tyrosin 99.1 5.1E-11 1.8E-15 116.4 7.6 86 364-454 53-144 (343)
208 3is5_A Calcium-dependent prote 99.1 1.1E-10 3.8E-15 111.2 9.7 85 364-453 28-113 (285)
209 3kn6_A Ribosomal protein S6 ki 99.1 1.1E-10 3.8E-15 113.5 9.9 82 364-454 17-100 (325)
210 3l9p_A Anaplastic lymphoma kin 99.1 3E-11 1E-15 119.6 5.8 87 364-455 77-169 (367)
211 3soc_A Activin receptor type-2 99.1 4.5E-11 1.5E-15 116.1 6.9 85 364-454 30-116 (322)
212 3uc3_A Serine/threonine-protei 99.1 7.9E-11 2.7E-15 116.3 8.8 84 364-454 26-110 (361)
213 4f0f_A Serine/threonine-protei 99.1 8.1E-11 2.8E-15 112.0 8.6 92 364-459 25-120 (287)
214 3lxl_A Tyrosine-protein kinase 99.1 5.3E-11 1.8E-15 115.7 7.4 90 364-457 29-123 (327)
215 1zy4_A Serine/threonine-protei 99.1 6.5E-11 2.2E-15 113.2 7.9 88 364-456 12-111 (303)
216 1mqb_A Ephrin type-A receptor 99.1 4.9E-11 1.7E-15 116.4 7.1 92 364-460 50-146 (333)
217 3soa_A Calcium/calmodulin-depe 99.1 8.2E-11 2.8E-15 119.4 8.9 87 364-454 17-104 (444)
218 2w4o_A Calcium/calmodulin-depe 99.1 7.4E-11 2.5E-15 116.0 8.3 83 364-454 59-142 (349)
219 3lxp_A Non-receptor tyrosine-p 99.1 1.4E-10 4.8E-15 112.3 10.1 89 364-455 37-130 (318)
220 1u5q_A Serine/threonine protei 99.1 6.1E-11 2.1E-15 116.5 7.6 90 364-457 60-150 (348)
221 3bhy_A Death-associated protei 99.1 1.4E-10 4.7E-15 110.1 9.9 89 364-454 11-102 (283)
222 2a2a_A Death-associated protei 99.1 1.5E-10 5.1E-15 112.3 10.2 89 364-454 18-109 (321)
223 4fr4_A YANK1, serine/threonine 99.1 6.4E-11 2.2E-15 117.9 7.8 88 364-454 21-109 (384)
224 2h8h_A Proto-oncogene tyrosine 99.1 5.3E-11 1.8E-15 123.9 7.5 83 364-454 273-355 (535)
225 3gni_B Strad alpha; kinase fol 99.1 1.4E-10 4.9E-15 115.5 10.2 87 364-454 31-120 (389)
226 2w1i_A JAK2; chromosomal rearr 99.1 6.8E-11 2.3E-15 114.9 7.6 92 364-459 47-143 (326)
227 3f3z_A Calcium/calmodulin-depe 99.1 1.3E-10 4.4E-15 110.0 9.2 85 364-454 15-100 (277)
228 3a8x_A Protein kinase C IOTA t 99.1 1.1E-10 3.9E-15 114.5 9.1 88 364-454 15-104 (345)
229 2ac3_A MAP kinase-interacting 99.1 1.5E-10 5.3E-15 111.6 9.9 85 364-454 19-105 (316)
230 1x8b_A WEE1HU, WEE1-like prote 99.1 1.8E-10 6E-15 109.3 10.1 87 364-454 17-105 (289)
231 2clq_A Mitogen-activated prote 99.1 1.3E-10 4.5E-15 110.8 9.2 86 364-455 28-114 (295)
232 1rdq_E PKA C-alpha, CAMP-depen 99.1 9.2E-11 3.2E-15 115.3 8.3 88 364-454 47-135 (350)
233 2w5a_A Serine/threonine-protei 99.1 1.1E-10 3.8E-15 110.5 8.5 88 364-453 12-100 (279)
234 3eqc_A Dual specificity mitoge 99.1 8.8E-11 3E-15 115.7 7.9 86 364-454 39-125 (360)
235 2ivs_A Proto-oncogene tyrosine 99.1 9.6E-11 3.3E-15 112.9 8.0 87 364-455 29-121 (314)
236 2j7t_A Serine/threonine-protei 99.1 9.1E-11 3.1E-15 112.4 7.7 89 364-458 25-114 (302)
237 2pmi_A Negative RE, cyclin-dep 99.1 1.3E-10 4.6E-15 112.4 8.9 84 364-453 11-95 (317)
238 2yex_A Serine/threonine-protei 99.1 1.7E-10 6E-15 108.9 9.3 86 364-454 13-99 (276)
239 3tt0_A Basic fibroblast growth 99.1 7.6E-11 2.6E-15 117.3 7.0 87 364-455 75-170 (382)
240 1qpc_A LCK kinase; alpha beta 99.1 1.3E-10 4.5E-15 110.0 8.3 83 364-454 19-101 (279)
241 3kfa_A Tyrosine-protein kinase 99.1 1E-10 3.5E-15 111.3 7.5 84 364-454 19-103 (288)
242 3poz_A Epidermal growth factor 99.1 6.5E-11 2.2E-15 115.2 6.2 90 364-459 21-115 (327)
243 4fl3_A Tyrosine-protein kinase 99.1 1.4E-10 4.8E-15 123.0 9.2 86 364-454 375-463 (635)
244 2rku_A Serine/threonine-protei 99.1 2.5E-10 8.6E-15 109.0 10.1 88 364-454 21-109 (294)
245 3f66_A Hepatocyte growth facto 99.1 1E-10 3.6E-15 111.9 7.5 92 364-459 31-126 (298)
246 1t46_A HOMO sapiens V-KIT hard 99.1 9.6E-11 3.3E-15 112.8 7.2 87 364-455 29-122 (313)
247 3c1x_A Hepatocyte growth facto 99.1 6.1E-11 2.1E-15 117.7 5.9 92 364-459 95-190 (373)
248 2acx_A G protein-coupled recep 99.1 1.2E-10 4.1E-15 121.3 8.3 89 364-455 190-279 (576)
249 1ob3_A PFPK5, cell division co 99.1 9.3E-11 3.2E-15 111.8 6.9 90 364-458 8-97 (288)
250 2pvf_A Fibroblast growth facto 99.1 1.5E-10 5E-15 113.0 8.3 87 364-455 41-136 (334)
251 2wqm_A Serine/threonine-protei 99.1 2.8E-10 9.6E-15 109.5 10.2 87 364-453 38-125 (310)
252 2y94_A 5'-AMP-activated protei 99.1 1.6E-10 5.3E-15 118.3 8.7 88 364-454 22-110 (476)
253 4dc2_A Protein kinase C IOTA t 99.1 1.1E-10 3.6E-15 116.8 7.2 88 364-454 58-147 (396)
254 3o0g_A Cell division protein k 99.1 1.8E-10 6.1E-15 110.0 8.5 89 364-457 8-97 (292)
255 3txo_A PKC-L, NPKC-ETA, protei 99.1 1.7E-10 5.7E-15 113.6 8.4 88 364-454 29-118 (353)
256 3kk8_A Calcium/calmodulin depe 99.1 2.6E-10 8.8E-15 108.3 9.3 87 364-454 12-99 (284)
257 3com_A Serine/threonine-protei 99.1 1.4E-10 4.9E-15 111.8 7.6 86 364-457 35-121 (314)
258 3i6u_A CDS1, serine/threonine- 99.1 1.4E-10 4.6E-15 117.0 7.7 88 364-454 141-233 (419)
259 2yfx_A Tyrosine-protein kinase 99.1 1E-10 3.6E-15 113.6 6.6 87 364-455 36-128 (327)
260 1mp8_A Focal adhesion kinase 1 99.1 1.1E-10 3.7E-15 110.9 6.5 90 364-459 21-114 (281)
261 2buj_A Serine/threonine-protei 99.1 1.8E-10 6.1E-15 111.2 8.2 86 364-453 35-123 (317)
262 3lb7_A RAF proto-oncogene seri 99.1 1.4E-10 4.9E-15 111.7 7.5 91 364-461 42-132 (307)
263 4agu_A Cyclin-dependent kinase 99.1 2.7E-10 9.4E-15 109.6 9.4 87 364-454 9-96 (311)
264 3fdn_A Serine/threonine-protei 99.1 1.4E-10 5E-15 109.8 7.3 88 364-454 15-103 (279)
265 2jam_A Calcium/calmodulin-depe 99.1 2.4E-10 8.2E-15 109.8 8.9 85 364-454 15-100 (304)
266 2h6d_A 5'-AMP-activated protei 99.1 2.4E-10 8.3E-15 107.9 8.8 88 364-454 17-105 (276)
267 2zv2_A Calcium/calmodulin-depe 99.1 1.7E-10 6E-15 110.4 7.8 90 364-453 19-131 (298)
268 3pls_A Macrophage-stimulating 99.1 1.2E-10 4E-15 111.4 6.5 93 364-460 27-123 (298)
269 3q5i_A Protein kinase; CDPK, m 99.1 2.7E-10 9.1E-15 117.7 9.7 89 364-454 42-140 (504)
270 1rjb_A FL cytokine receptor; k 99.1 1.5E-10 5.2E-15 113.1 7.5 88 364-456 51-145 (344)
271 2owb_A Serine/threonine-protei 99.1 3.2E-10 1.1E-14 110.7 9.7 88 364-454 47-135 (335)
272 1xjd_A Protein kinase C, theta 99.1 1.6E-10 5.5E-15 113.4 7.5 87 364-453 23-111 (345)
273 3lij_A Calcium/calmodulin depe 99.1 2.4E-10 8.1E-15 117.8 9.1 87 364-454 43-130 (494)
274 3nyv_A Calmodulin-domain prote 99.1 3.2E-10 1.1E-14 116.4 9.8 88 364-454 32-120 (484)
275 3c4z_A Rhodopsin kinase; Ser/T 99.1 2.1E-10 7E-15 119.1 8.4 88 364-454 191-279 (543)
276 2y7j_A Phosphorylase B kinase 99.1 5.1E-10 1.7E-14 110.6 10.7 89 364-454 100-194 (365)
277 2eva_A TAK1 kinase - TAB1 chim 99.1 1.7E-10 5.8E-15 111.2 7.1 81 364-455 14-94 (307)
278 3a7i_A MST3 kinase, serine/thr 99.1 3.6E-10 1.2E-14 108.4 9.4 85 364-453 28-113 (303)
279 3p1a_A MYT1 kinase, membrane-a 99.0 2.1E-10 7.2E-15 110.7 7.5 91 364-459 63-155 (311)
280 3og7_A AKAP9-BRAF fusion prote 99.0 1.5E-10 5.2E-15 110.4 6.4 90 364-460 30-119 (289)
281 3ork_A Serine/threonine protei 99.0 1E-10 3.5E-15 112.9 5.0 90 364-454 18-110 (311)
282 2qr7_A Ribosomal protein S6 ki 99.0 2.3E-10 7.8E-15 112.1 7.6 81 364-454 28-110 (342)
283 1t4h_A Serine/threonine-protei 99.0 6.8E-10 2.3E-14 105.8 10.8 88 364-453 32-122 (290)
284 3mwu_A Calmodulin-domain prote 99.0 2.7E-10 9.1E-15 117.2 8.3 87 364-454 28-115 (486)
285 1p4o_A Insulin-like growth fac 99.0 2E-10 6.8E-15 111.2 6.7 85 364-453 31-121 (322)
286 2r5t_A Serine/threonine-protei 99.0 1.9E-10 6.5E-15 114.1 6.6 88 364-454 44-133 (373)
287 3pg1_A Mitogen-activated prote 99.0 2E-10 6.7E-15 113.2 6.7 107 352-459 14-132 (362)
288 4ejn_A RAC-alpha serine/threon 99.0 9.1E-11 3.1E-15 119.3 4.4 88 364-454 154-242 (446)
289 3un9_A NLR family member X1; l 99.0 2.5E-12 8.5E-17 127.6 -7.1 111 70-180 72-197 (372)
290 2vgo_A Serine/threonine-protei 99.0 2.4E-10 8.1E-15 108.6 6.8 88 364-454 20-108 (284)
291 3e7e_A HBUB1, BUB1A, mitotic c 99.0 1.9E-10 6.5E-15 113.6 6.4 81 364-453 71-160 (365)
292 1phk_A Phosphorylase kinase; g 99.0 4.2E-10 1.4E-14 107.6 8.5 89 364-454 23-118 (298)
293 2h34_A Serine/threonine-protei 99.0 4.5E-10 1.6E-14 108.2 8.7 88 364-454 40-128 (309)
294 2i1m_A Macrophage colony-stimu 99.0 3.6E-10 1.2E-14 109.9 8.0 86 364-454 52-144 (333)
295 3cc6_A Protein tyrosine kinase 99.0 2.3E-10 7.7E-15 108.6 6.3 89 364-458 18-110 (281)
296 2vwi_A Serine/threonine-protei 99.0 1E-10 3.4E-15 112.1 3.9 85 364-453 21-106 (303)
297 3h4j_B AMPK kdaid, SNF1-like p 99.0 2.3E-10 7.8E-15 111.9 6.4 87 364-454 15-102 (336)
298 1ua2_A CAK, cell division prot 99.0 1.7E-10 6E-15 113.1 5.4 92 364-458 16-109 (346)
299 2ycf_A Serine/threonine-protei 99.0 3.9E-10 1.3E-14 109.3 7.8 88 364-454 16-108 (322)
300 3kex_A Receptor tyrosine-prote 99.0 1.3E-10 4.5E-15 112.8 4.4 89 364-458 19-112 (325)
301 1vzo_A Ribosomal protein S6 ki 99.0 1.2E-10 4.1E-15 114.8 4.0 89 364-454 60-153 (355)
302 4aaa_A Cyclin-dependent kinase 99.0 6.3E-10 2.2E-14 108.3 9.1 87 364-454 31-118 (331)
303 2wei_A Calmodulin-domain prote 99.0 6.6E-10 2.2E-14 105.8 8.9 87 364-454 28-115 (287)
304 2a19_B Interferon-induced, dou 99.0 3.7E-10 1.3E-14 107.0 7.1 83 364-454 17-114 (284)
305 2i0e_A Protein kinase C-beta I 99.0 2.6E-10 8.8E-15 112.3 6.2 88 364-454 26-115 (353)
306 2xir_A Vascular endothelial gr 99.0 2.5E-10 8.4E-15 110.1 6.0 89 364-456 33-128 (316)
307 2izr_A Casein kinase I isoform 99.0 2.3E-10 7.8E-15 111.4 5.7 87 364-459 15-103 (330)
308 2pml_X PFPK7, Ser/Thr protein 99.0 1.6E-10 5.6E-15 113.1 4.6 84 364-450 37-133 (348)
309 2eue_A Carbon catabolite derep 99.0 7.9E-10 2.7E-14 104.4 9.2 87 364-454 19-106 (275)
310 3rw6_A Nuclear RNA export fact 99.0 2.5E-11 8.6E-16 113.8 -1.4 127 56-184 76-238 (267)
311 3mtl_A Cell division protein k 99.0 1E-10 3.5E-15 113.6 2.9 89 364-458 8-97 (324)
312 3q4u_A Activin receptor type-1 99.0 5.6E-10 1.9E-14 106.8 7.9 83 364-454 14-100 (301)
313 3gxj_A TGF-beta receptor type- 99.0 5.6E-10 1.9E-14 106.8 7.9 83 364-454 9-95 (303)
314 2wtk_C Serine/threonine-protei 99.0 6.6E-10 2.3E-14 106.5 8.4 89 364-453 11-100 (305)
315 1fvr_A Tyrosine-protein kinase 99.0 4.8E-10 1.7E-14 108.8 7.5 87 364-455 31-121 (327)
316 1xbb_A Tyrosine-protein kinase 99.0 6.6E-10 2.3E-14 105.9 8.1 85 365-454 24-111 (291)
317 3lzb_A Epidermal growth factor 99.0 4.1E-10 1.4E-14 109.6 6.7 90 364-459 21-115 (327)
318 3qup_A Tyrosine-protein kinase 99.0 6.3E-10 2.2E-14 107.7 7.8 86 364-453 29-124 (323)
319 3gbz_A Kinase, CMGC CDK; ssgci 99.0 4.5E-10 1.5E-14 109.3 6.7 86 364-454 40-126 (329)
320 3lm5_A Serine/threonine-protei 99.0 9.9E-10 3.4E-14 106.7 8.7 87 364-454 35-123 (327)
321 3dls_A PAS domain-containing s 99.0 3.4E-10 1.2E-14 110.6 5.2 89 364-454 30-124 (335)
322 2j0j_A Focal adhesion kinase 1 98.9 7.1E-10 2.4E-14 118.1 7.3 89 364-458 396-488 (656)
323 2r3i_A Cell division protein k 98.9 8.6E-10 2.9E-14 105.4 7.1 86 364-454 9-95 (299)
324 3brb_A Proto-oncogene tyrosine 98.9 1.1E-09 3.7E-14 105.6 7.8 88 364-453 40-134 (313)
325 2x7f_A TRAF2 and NCK-interacti 98.9 1.2E-09 4.1E-14 105.8 8.0 86 364-454 30-121 (326)
326 3nsz_A CK II alpha, casein kin 98.9 2.5E-09 8.7E-14 103.7 10.3 83 364-453 42-126 (330)
327 1u46_A ACK-1, activated CDC42 98.9 5.1E-10 1.7E-14 106.5 5.1 89 364-456 24-116 (291)
328 3dbq_A Dual specificity protei 98.9 1.8E-09 6.3E-14 105.6 9.1 86 364-454 15-102 (343)
329 3llt_A Serine/threonine kinase 98.9 3E-10 1E-14 111.8 3.4 88 360-455 35-130 (360)
330 3mdy_A Bone morphogenetic prot 98.9 1.2E-09 4.2E-14 106.2 7.7 83 364-454 43-129 (337)
331 2i6l_A Mitogen-activated prote 98.9 1.7E-09 5.8E-14 104.2 8.5 85 364-453 17-114 (320)
332 1byg_A CSK, protein (C-termina 98.9 8.8E-10 3E-14 104.3 6.4 83 364-454 27-109 (278)
333 2vuw_A Serine/threonine-protei 98.9 2E-10 6.9E-15 112.0 1.8 87 364-453 26-155 (336)
334 3sb4_A Hypothetical leucine ri 98.9 3E-09 1E-13 103.5 9.9 38 93-131 100-137 (329)
335 2zmd_A Dual specificity protei 98.9 2.4E-09 8.2E-14 106.8 9.3 87 364-455 62-150 (390)
336 3rgf_A Cyclin-dependent kinase 98.9 1.7E-09 5.7E-14 108.4 8.1 82 364-452 27-111 (405)
337 3oz6_A Mitogen-activated prote 98.9 2.5E-09 8.6E-14 106.5 9.3 88 364-454 15-104 (388)
338 3mi9_A Cell division protein k 98.9 1.1E-09 3.9E-14 107.3 6.5 93 364-459 23-122 (351)
339 1nxk_A MAP kinase-activated pr 98.9 1.4E-09 4.7E-14 108.9 7.1 83 364-455 68-154 (400)
340 1b6c_B TGF-B superfamily recep 98.9 3E-09 1E-13 103.7 9.2 83 364-454 48-134 (342)
341 2pzi_A Probable serine/threoni 98.9 5.7E-10 1.9E-14 119.6 4.3 87 364-453 86-177 (681)
342 3an0_A Dual specificity mitoge 98.9 2.8E-09 9.5E-14 104.0 8.6 84 364-453 57-142 (340)
343 3fme_A Dual specificity mitoge 98.9 2.3E-09 7.7E-14 101.9 7.7 85 364-453 13-98 (290)
344 1csn_A Casein kinase-1; phosph 98.9 1.6E-09 5.6E-14 103.3 6.7 87 364-459 16-104 (298)
345 3m2w_A MAP kinase-activated pr 98.9 2.3E-09 7.8E-14 102.7 7.6 81 364-455 24-110 (299)
346 3eb0_A Putative uncharacterize 98.9 1.2E-09 4.1E-14 108.7 5.7 80 364-452 13-129 (383)
347 3rp9_A Mitogen-activated prote 98.9 2.1E-09 7.3E-14 109.5 7.7 88 364-454 59-150 (458)
348 3n9x_A Phosphotransferase; mal 98.9 2.7E-09 9.2E-14 107.9 8.3 88 364-454 32-123 (432)
349 3ll6_A Cyclin G-associated kin 98.9 2E-09 6.7E-14 104.6 7.0 85 364-453 34-126 (337)
350 1cm8_A Phosphorylated MAP kina 98.9 2E-09 7E-14 106.4 7.0 88 364-454 31-123 (367)
351 3g33_A Cell division protein k 98.9 1.6E-09 5.4E-14 104.2 6.0 91 364-455 15-113 (308)
352 3pfq_A PKC-B, PKC-beta, protei 98.9 1.8E-09 6.2E-14 115.3 7.0 88 364-454 347-436 (674)
353 2y4i_B KSR2, HKSR2, kinase sup 98.9 2.6E-10 9E-15 110.1 0.3 90 364-459 39-128 (319)
354 3byv_A Rhoptry kinase; malaria 98.9 1.1E-09 3.9E-14 108.6 4.8 88 364-453 79-192 (377)
355 3ogk_B Coronatine-insensitive 98.8 1.3E-10 4.4E-15 122.2 -3.2 155 70-226 342-528 (592)
356 2b9h_A MAP kinase FUS3, mitoge 98.8 3.8E-09 1.3E-13 103.4 7.6 87 364-454 17-107 (353)
357 2rio_A Serine/threonine-protei 98.8 3E-09 1E-13 107.6 7.0 82 364-455 21-103 (434)
358 3op5_A Serine/threonine-protei 98.8 1.7E-09 6E-14 106.7 5.0 97 364-461 41-152 (364)
359 3e3p_A Protein kinase, putativ 98.8 5E-09 1.7E-13 102.9 8.0 93 354-452 17-117 (360)
360 3qyz_A Mitogen-activated prote 98.8 5.3E-09 1.8E-13 103.1 8.2 87 364-454 33-123 (364)
361 3en9_A Glycoprotease, O-sialog 98.8 4.4E-09 1.5E-13 109.3 7.9 87 364-453 342-432 (540)
362 4exu_A Mitogen-activated prote 98.8 5.6E-09 1.9E-13 103.3 8.0 87 364-453 48-139 (371)
363 3p23_A Serine/threonine-protei 98.8 2.6E-09 8.9E-14 108.0 5.5 83 364-456 30-113 (432)
364 3qa8_A MGC80376 protein; kinas 98.8 7.8E-10 2.7E-14 116.7 1.5 89 364-455 20-113 (676)
365 3ttj_A Mitogen-activated prote 98.8 6.3E-09 2.2E-13 106.2 8.0 87 364-453 68-159 (464)
366 3aln_A Dual specificity mitoge 98.8 9.5E-09 3.2E-13 99.6 8.8 83 364-452 28-112 (327)
367 3cek_A Dual specificity protei 98.8 8.9E-09 3.1E-13 99.1 8.4 86 364-454 34-121 (313)
368 3g2f_A Bone morphogenetic prot 98.8 6.2E-09 2.1E-13 101.2 7.3 84 364-455 19-107 (336)
369 3coi_A Mitogen-activated prote 98.8 9.3E-09 3.2E-13 100.9 8.5 87 364-453 30-121 (353)
370 2xrw_A Mitogen-activated prote 98.8 1.4E-08 4.9E-13 100.4 9.4 87 364-453 31-122 (371)
371 3un9_A NLR family member X1; l 98.8 1.1E-09 3.8E-14 108.4 1.2 137 70-206 101-253 (372)
372 3ogk_B Coronatine-insensitive 98.8 6.8E-10 2.3E-14 116.7 -0.6 105 71-176 139-253 (592)
373 2v62_A Serine/threonine-protei 98.8 3E-09 1E-13 104.2 4.1 89 364-455 43-146 (345)
374 2iwi_A Serine/threonine-protei 98.8 1.5E-09 5.3E-14 104.4 1.6 89 364-454 37-133 (312)
375 2fst_X Mitogen-activated prote 98.8 7.4E-09 2.5E-13 102.4 6.4 87 364-453 35-126 (367)
376 2jii_A Serine/threonine-protei 98.7 2.8E-09 9.5E-14 104.6 3.3 79 364-454 48-151 (352)
377 3uzp_A CKI-delta, CKID, casein 98.7 8.6E-09 2.9E-13 98.2 6.5 88 364-459 15-103 (296)
378 3rw6_A Nuclear RNA export fact 98.7 1.6E-09 5.6E-14 101.5 1.2 80 91-172 167-257 (267)
379 1blx_A Cyclin-dependent kinase 98.7 7.8E-09 2.7E-13 100.0 6.1 87 364-455 17-113 (326)
380 1j1b_A Glycogen synthase kinas 98.7 9.4E-09 3.2E-13 103.5 6.8 80 364-452 60-144 (420)
381 3fhr_A MAP kinase-activated pr 98.7 1.5E-08 5E-13 98.9 7.9 84 364-455 35-121 (336)
382 4hgt_A Casein kinase I isoform 98.7 7.3E-09 2.5E-13 98.6 5.3 88 364-459 15-103 (296)
383 2dyl_A Dual specificity mitoge 98.7 1.4E-08 4.6E-13 97.8 7.2 84 364-452 31-115 (318)
384 3q60_A ROP5B; pseudokinase, tr 98.7 2.3E-08 7.8E-13 98.8 7.7 88 364-454 68-181 (371)
385 3kvw_A DYRK2, dual specificity 98.7 2.4E-08 8.3E-13 100.8 7.8 84 364-455 103-193 (429)
386 1wak_A Serine/threonine-protei 98.7 8.3E-09 2.9E-13 102.6 4.2 83 364-454 43-138 (397)
387 3sv0_A Casein kinase I-like; t 98.7 2.4E-08 8.2E-13 102.3 7.3 88 364-460 13-102 (483)
388 4e7w_A Glycogen synthase kinas 98.6 1.8E-08 6E-13 100.6 5.6 78 364-449 46-127 (394)
389 1z57_A Dual specificity protei 98.6 1.9E-08 6.4E-13 97.6 5.5 84 364-455 20-111 (339)
390 3a99_A Proto-oncogene serine/t 98.6 1.4E-08 4.9E-13 98.2 3.9 89 364-454 49-143 (320)
391 1zar_A RIO2 kinase; serine kin 98.6 1.4E-08 4.7E-13 96.6 3.6 82 364-452 96-191 (282)
392 2p1m_B Transport inhibitor res 98.6 1.1E-08 3.9E-13 107.3 2.4 107 70-176 105-221 (594)
393 1io0_A Tropomodulin; LRR prote 98.5 1.1E-08 3.8E-13 90.8 0.7 111 69-179 35-164 (185)
394 1q8y_A SR protein kinase; tran 98.5 5.5E-08 1.9E-12 95.8 4.7 85 364-454 25-123 (373)
395 2vx3_A Dual specificity tyrosi 98.5 9E-08 3.1E-12 94.9 6.2 84 364-455 60-150 (382)
396 1io0_A Tropomodulin; LRR prote 98.5 2.8E-09 9.5E-14 94.8 -4.5 123 85-224 27-164 (185)
397 2p1m_B Transport inhibitor res 98.5 3.6E-09 1.2E-13 111.2 -4.8 166 70-237 338-533 (594)
398 2eu9_A Dual specificity protei 98.5 6.4E-08 2.2E-12 94.5 4.5 84 364-455 25-116 (355)
399 4azs_A Methyltransferase WBDD; 98.5 1.7E-07 5.8E-12 98.0 7.2 89 365-455 241-337 (569)
400 2ra8_A Uncharacterized protein 98.3 8.9E-08 3E-12 94.1 1.6 18 209-226 305-322 (362)
401 3sb4_A Hypothetical leucine ri 98.3 1.1E-06 3.8E-11 85.2 8.4 85 93-179 225-310 (329)
402 2ra8_A Uncharacterized protein 98.3 2E-07 6.8E-12 91.6 2.4 173 70-245 107-320 (362)
403 4fdw_A Leucine rich hypothetic 98.0 2.9E-05 9.9E-10 77.3 12.3 144 71-224 136-284 (401)
404 4fdw_A Leucine rich hypothetic 98.0 5.9E-05 2E-09 75.1 13.1 165 72-244 159-357 (401)
405 1zth_A RIO1 serine protein kin 97.9 9.2E-06 3.2E-10 75.8 6.1 85 364-452 53-165 (258)
406 4gyi_A RIO2 kinase; protein ki 97.8 1.9E-06 6.4E-11 84.9 -1.1 86 364-453 101-204 (397)
407 3dzo_A Rhoptry kinase domain; 97.6 5.7E-05 1.9E-09 75.5 5.8 53 364-417 84-137 (413)
408 3e4g_A ATP synthase subunit S, 97.6 1.6E-05 5.6E-10 69.1 1.4 82 96-177 63-150 (176)
409 3e4g_A ATP synthase subunit S, 97.4 4.1E-05 1.4E-09 66.5 2.1 86 70-155 61-153 (176)
410 3rfe_A Platelet glycoprotein I 97.0 0.001 3.4E-08 54.8 5.9 9 75-83 13-21 (130)
411 3rfe_A Platelet glycoprotein I 96.9 0.0017 5.8E-08 53.5 6.7 57 97-155 11-68 (130)
412 1pgv_A TMD-1, tropomodulin TMD 96.9 0.00024 8.1E-09 62.9 1.0 110 69-178 40-169 (197)
413 3d1u_A Putative fructosamine-3 96.8 0.0013 4.6E-08 62.1 5.5 75 364-448 21-98 (288)
414 1nd4_A Aminoglycoside 3'-phosp 96.6 0.003 1E-07 58.0 6.9 73 367-448 29-103 (264)
415 3tm0_A Aminoglycoside 3'-phosp 96.5 0.0046 1.6E-07 57.1 7.1 81 364-451 20-101 (263)
416 1pgv_A TMD-1, tropomodulin TMD 96.1 0.0026 8.8E-08 56.2 2.8 90 88-177 35-137 (197)
417 4gt6_A Cell surface protein; l 95.8 0.032 1.1E-06 54.9 9.8 83 89-175 260-343 (394)
418 4h09_A Hypothetical leucine ri 95.5 0.035 1.2E-06 54.2 8.4 102 71-176 218-320 (379)
419 4h09_A Hypothetical leucine ri 95.4 0.078 2.7E-06 51.6 10.6 94 87-184 210-303 (379)
420 4gt6_A Cell surface protein; l 95.2 0.03 1E-06 55.0 7.0 104 71-178 266-369 (394)
421 4fs7_A Uncharacterized protein 95.1 0.032 1.1E-06 54.9 6.8 85 88-176 291-376 (394)
422 4fs7_A Uncharacterized protein 94.5 0.056 1.9E-06 53.1 6.7 105 72-185 255-360 (394)
423 2l2t_A Receptor tyrosine-prote 94.2 0.055 1.9E-06 34.6 3.8 30 291-320 11-40 (44)
424 2ks1_B Epidermal growth factor 94.2 0.044 1.5E-06 35.2 3.4 29 292-320 13-41 (44)
425 3dxp_A Putative acyl-COA dehyd 94.1 0.057 2E-06 52.2 5.7 81 364-448 44-129 (359)
426 3f7w_A Putative fructosamine-3 93.4 0.089 3E-06 49.2 5.5 76 364-447 21-97 (288)
427 4gkh_A Aminoglycoside 3'-phosp 91.6 0.38 1.3E-05 44.1 7.3 78 365-451 31-111 (272)
428 3jr1_A Putative fructosamine-3 90.8 0.47 1.6E-05 45.0 7.1 74 364-447 42-118 (312)
429 2olc_A MTR kinase, methylthior 88.7 0.44 1.5E-05 46.6 5.3 78 364-445 36-120 (397)
430 2jwa_A Receptor tyrosine-prote 86.9 0.57 1.9E-05 29.9 3.1 24 297-320 18-41 (44)
431 3cxl_A N-chimerin; SH2, RHO-GA 85.8 0.097 3.3E-06 52.7 -1.4 61 364-429 148-215 (463)
432 3r70_A Aminoglycoside phosphot 85.1 1.5 5E-05 41.4 6.6 70 364-449 43-116 (320)
433 2k1k_A Ephrin type-A receptor 83.5 1.3 4.4E-05 27.4 3.5 14 295-308 15-28 (38)
434 3ovc_A Hygromycin-B 4-O-kinase 82.1 3.1 0.0001 40.1 7.6 74 364-448 47-122 (362)
435 3tdw_A Gentamicin resistance p 80.2 4.5 0.00015 37.7 7.9 75 364-449 25-102 (306)
436 2k9y_A Ephrin type-A receptor 75.9 2.4 8.2E-05 26.5 3.1 11 292-302 15-25 (41)
437 3ats_A Putative uncharacterize 74.7 2.1 7.2E-05 40.8 3.8 85 365-450 27-123 (357)
438 2l8s_A Integrin alpha-1; trans 73.1 4.3 0.00015 27.0 3.8 24 288-311 8-31 (54)
439 3sg8_A APH(2'')-ID; antibiotic 65.1 6.7 0.00023 36.3 4.9 76 364-449 26-105 (304)
440 2q83_A YTAA protein; 2635576, 57.1 15 0.0005 34.3 5.8 72 365-447 39-118 (346)
441 2knc_A Integrin alpha-IIB; tra 55.2 22 0.00074 23.7 4.5 25 287-311 10-34 (54)
442 1zyl_A Hypothetical protein YI 55.0 25 0.00086 32.5 7.1 74 366-447 34-114 (328)
443 2k1a_A Integrin alpha-IIB; sin 50.1 22 0.00077 22.3 3.8 25 287-311 8-32 (42)
444 1iij_A ERBB-2 receptor protein 48.9 4.8 0.00017 24.2 0.5 6 312-317 29-34 (35)
445 2pyw_A Uncharacterized protein 41.3 44 0.0015 32.4 6.6 76 364-444 40-122 (420)
446 2ppq_A HSK, HK, homoserine kin 41.0 33 0.0011 31.6 5.5 89 350-447 7-110 (322)
447 2l9u_A Receptor tyrosine-prote 34.5 29 0.00099 20.5 2.3 24 295-318 11-34 (40)
448 2l34_A TYRO protein tyrosine k 32.8 47 0.0016 19.6 3.1 21 295-315 11-31 (33)
449 1nw1_A Choline kinase (49.2 KD 31.2 50 0.0017 32.2 5.1 71 365-447 80-159 (429)
450 3csv_A Aminoglycoside phosphot 30.5 35 0.0012 31.7 3.7 77 366-453 26-105 (333)
451 3feg_A Choline/ethanolamine ki 26.8 56 0.0019 31.4 4.5 73 365-448 57-138 (379)
452 2qg7_A Ethanolamine kinase PV0 25.9 70 0.0024 31.6 5.1 73 364-447 114-188 (458)
453 2klu_A T-cell surface glycopro 25.9 86 0.0029 21.6 3.8 16 292-307 12-27 (70)
454 3dxq_A Choline/ethanolamine ki 24.8 46 0.0016 30.4 3.4 70 364-447 24-95 (301)
455 3i1a_A Spectinomycin phosphotr 21.3 3.3E+02 0.011 25.0 8.8 68 367-447 32-108 (339)
No 1
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.97 E-value=1.7e-31 Score=260.24 Aligned_cols=218 Identities=29% Similarity=0.509 Sum_probs=188.6
Q ss_pred CchhHHHHHHHHHHhcccCCCCCCCCCCCCCCCCCC--ccceeeCCCC--CCEEEEEecCCCCcc--cCCccccCCCCCC
Q 012224 24 FATNEFWALTTFKEAIYEDPHLVLSNWNALDADPCH--WTGIACSDAR--DRVLKINISGSSLKG--FLAPELGLLTYLQ 97 (468)
Q Consensus 24 ~~~~~~~aL~~~k~~~~~~~~~~l~~w~~~~~~~c~--w~gv~C~~~~--~~v~~L~L~~n~l~g--~~p~~l~~l~~L~ 97 (468)
|.++|.+||++||+++. ||. .+.+|+. +.+||. |.||+|+... ++|+.|+|++|.++| .+|+.++.+++|+
T Consensus 3 c~~~~~~aL~~~k~~~~-~~~-~l~~W~~-~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~ 79 (313)
T 1ogq_A 3 CNPQDKQALLQIKKDLG-NPT-TLSSWLP-TTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLN 79 (313)
T ss_dssp SCHHHHHHHHHHHHHTT-CCG-GGTTCCT-TSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCS
T ss_pred CCHHHHHHHHHHHHhcC-Ccc-cccCCCC-CCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCCC
Confidence 56899999999999994 665 7899975 468998 9999998533 799999999999999 9999999999999
Q ss_pred EEEccC-ccccccCChhhcCCCCCCEEEccCCCCCCCCCcCCCCCcccceeecccccCcccCChhccCCCCCcEEeccCC
Q 012224 98 ELILHG-NNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRN 176 (468)
Q Consensus 98 ~L~Ls~-N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N 176 (468)
+|+|++ |.+.+.+|..|+++++|++|+|++|+++|.+|..+..+++|++|+|++|.+++.+|..+..+++|++|++++|
T Consensus 80 ~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 159 (313)
T 1ogq_A 80 FLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGN 159 (313)
T ss_dssp EEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSS
T ss_pred eeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCC
Confidence 999995 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccCCCCCCccccccccccccCCCCccC-----ccCCCCCCEEEcccCcCccCCCccccCCC---CCcccCCcCCC
Q 012224 177 RLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSYNFFVGSIPKCLEYLP---STSFQGNCLQN 246 (468)
Q Consensus 177 ~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~-----~~~l~~L~~l~ls~N~l~g~ip~~~~~l~---~~~~~~n~~~~ 246 (468)
.++|.+|..... ....+..+++++|.+++ +..++ |+.|++++|.+++.+|..+..++ .+.+++|.+..
T Consensus 160 ~l~~~~p~~l~~-l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 235 (313)
T 1ogq_A 160 RISGAIPDSYGS-FSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAF 235 (313)
T ss_dssp CCEEECCGGGGC-CCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECC
T ss_pred cccCcCCHHHhh-hhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceee
Confidence 999999975432 11256778888888764 34455 89999999999988887775544 45677775543
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.96 E-value=1e-28 Score=269.17 Aligned_cols=213 Identities=24% Similarity=0.364 Sum_probs=172.8
Q ss_pred CchhHHHHHHHHHHhcccCCCCCCCCCCCCCCCCCCccceeeCCCCCCEEEEEecCCCCccc---CC-------------
Q 012224 24 FATNEFWALTTFKEAIYEDPHLVLSNWNALDADPCHWTGIACSDARDRVLKINISGSSLKGF---LA------------- 87 (468)
Q Consensus 24 ~~~~~~~aL~~~k~~~~~~~~~~l~~w~~~~~~~c~w~gv~C~~~~~~v~~L~L~~n~l~g~---~p------------- 87 (468)
+.++|++||++||+++. ||. .+++|+. +.+||+|.||+|+ .++|+.|+|+++.+.|. +|
T Consensus 9 ~~~~~~~all~~k~~~~-~~~-~l~~W~~-~~~~C~w~gv~C~--~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~l~ 83 (768)
T 3rgz_A 9 SLYREIHQLISFKDVLP-DKN-LLPDWSS-NKNPCTFDGVTCR--DDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLF 83 (768)
T ss_dssp CHHHHHHHHHHHHTTCS-CTT-SSTTCCT-TSCGGGSTTEEEE--TTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCEEE
T ss_pred CCHHHHHHHHHHHhhCC-Ccc-cccCCCC-CCCCcCCcceEEC--CCcEEEEECCCCCcCCccCccChhHhccCcccccC
Confidence 56789999999999996 787 8999984 5689999999998 68999999999999987 44
Q ss_pred ----------ccccCCCCCCEEEccCccccccCCh--hhcCCCCCCEEEccCCCCCCCCCcCC-CCCcccceeecccccC
Q 012224 88 ----------PELGLLTYLQELILHGNNLIGIIPK--ELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQSNGL 154 (468)
Q Consensus 88 ----------~~l~~l~~L~~L~Ls~N~l~g~ip~--~~~~l~~L~~L~Ls~N~l~g~iP~~~-~~l~~L~~L~Ls~N~l 154 (468)
..++.+++|++|||++|.++|.+|. .++++++|++|||++|.+++.+|..+ ..+++|++|+|++|++
T Consensus 84 ~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l 163 (768)
T 3rgz_A 84 LSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSI 163 (768)
T ss_dssp CTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCC
T ss_pred CcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCcc
Confidence 5778889999999999999999998 89999999999999999999999876 7899999999999999
Q ss_pred cccCChh---ccCCCCCcEEeccCCCCCccCCCCCCccccccccccccCCCCccC----ccCCCCCCEEEcccCcCccCC
Q 012224 155 TGRLPAE---LGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG----LCHLSQLKVADFSYNFFVGSI 227 (468)
Q Consensus 155 ~g~~p~~---l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~----~~~l~~L~~l~ls~N~l~g~i 227 (468)
++..|.. +.++++|++|++++|.++|.+|.... .++..+++++|++.+ +..+++|+.|++++|.+++.+
T Consensus 164 ~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l----~~L~~L~Ls~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~ 239 (768)
T 3rgz_A 164 SGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRC----VNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNKLSGDF 239 (768)
T ss_dssp EEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTC----TTCCEEECCSSCCCSCCCBCTTCCSCCEEECCSSCCCSCH
T ss_pred CCcCChhhhhhccCCCCCEEECCCCcccccCCcccC----CcCCEEECcCCcCCCCCcccccCCCCCEEECcCCcCCCcc
Confidence 9888877 78888888888888888877765322 356667777777655 445667777777777777777
Q ss_pred CccccCCC---CCcccCCcCC
Q 012224 228 PKCLEYLP---STSFQGNCLQ 245 (468)
Q Consensus 228 p~~~~~l~---~~~~~~n~~~ 245 (468)
|..+..++ .+++++|.+.
T Consensus 240 ~~~l~~l~~L~~L~Ls~n~l~ 260 (768)
T 3rgz_A 240 SRAISTCTELKLLNISSNQFV 260 (768)
T ss_dssp HHHTTTCSSCCEEECCSSCCE
T ss_pred cHHHhcCCCCCEEECCCCccc
Confidence 76655443 3445555443
No 3
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.95 E-value=2e-28 Score=261.21 Aligned_cols=216 Identities=21% Similarity=0.345 Sum_probs=179.8
Q ss_pred hhHHHHHHHHHHhcccCCCCC-------CCCCCCCCCCCCCc---cceeeCCCCCCEEEEEecCCCCcccCCccccCCCC
Q 012224 26 TNEFWALTTFKEAIYEDPHLV-------LSNWNALDADPCHW---TGIACSDARDRVLKINISGSSLKGFLAPELGLLTY 95 (468)
Q Consensus 26 ~~~~~aL~~~k~~~~~~~~~~-------l~~w~~~~~~~c~w---~gv~C~~~~~~v~~L~L~~n~l~g~~p~~l~~l~~ 95 (468)
..|+.||.+++.++..+.+.. ..+|+. +.++|.| .||+|+. .++|+.|+|++++++|.+|+++++|++
T Consensus 29 ~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~-~~~~c~w~~~~GV~C~~-~~~V~~L~L~~~~l~g~lp~~l~~L~~ 106 (636)
T 4eco_A 29 IKDYLALKEIWDALNGKNWSQQGFGTQPGANWNF-NKELDMWGAQPGVSLNS-NGRVTGLSLEGFGASGRVPDAIGQLTE 106 (636)
T ss_dssp HHHHHHHHHHHHHTTGGGCCCCC------CCCCC-SSCGGGTTCCTTEEECT-TCCEEEEECTTSCCEEEECGGGGGCTT
T ss_pred HHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCC-CCCcccccCCCCeEEcC-CCCEEEEEecCcccCCcCChHHhcCcc
Confidence 479999999999986544432 348985 4789999 9999985 479999999999999999999999999
Q ss_pred CCEEEccCc-----------------------------------------------------------------------
Q 012224 96 LQELILHGN----------------------------------------------------------------------- 104 (468)
Q Consensus 96 L~~L~Ls~N----------------------------------------------------------------------- 104 (468)
|++|+|++|
T Consensus 107 L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~l 186 (636)
T 4eco_A 107 LEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKDT 186 (636)
T ss_dssp CCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCCCTT
T ss_pred ceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccchhhh
Confidence 999999998
Q ss_pred -------cccccCChhhcCCCCCCEEEccCCCCCCC-----------------CCcCCC--CCcccceeecccccCcccC
Q 012224 105 -------NLIGIIPKELGLLKRLKILDLGTNQLTGP-----------------IPPEIG--NLTGLVKINLQSNGLTGRL 158 (468)
Q Consensus 105 -------~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~-----------------iP~~~~--~l~~L~~L~Ls~N~l~g~~ 158 (468)
.++| ||..|+++++|++|||++|+|+|. +|..++ ++++|++|+|++|++.|.+
T Consensus 187 ~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~ 265 (636)
T 4eco_A 187 QIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKL 265 (636)
T ss_dssp TTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSC
T ss_pred hhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccC
Confidence 4456 899999999999999999999986 999999 9999999999999999999
Q ss_pred ChhccCCCCCcEEeccCCC-CCc-cCCCCCCcc----ccccccccccCCCCccC------ccCCCCCCEEEcccCcCccC
Q 012224 159 PAELGNLISLEELHLDRNR-LQG-AVPAGSNSG----YTANIHGMYASSANLTG------LCHLSQLKVADFSYNFFVGS 226 (468)
Q Consensus 159 p~~l~~l~~L~~L~ls~N~-l~g-~ip~~~~~~----~~~~l~~~~ls~n~l~~------~~~l~~L~~l~ls~N~l~g~ 226 (468)
|..++++++|++|++++|+ ++| .+|...... ...++..+++++|+++. +..+++|+.|++++|+++|.
T Consensus 266 p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~~ip~~~~l~~l~~L~~L~L~~N~l~g~ 345 (636)
T 4eco_A 266 PTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLKTFPVETSLQKMKKLGMLECLYNQLEGK 345 (636)
T ss_dssp CTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCSSCCCHHHHTTCTTCCEEECCSCCCEEE
T ss_pred hHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCCccCchhhhccCCCCCEEeCcCCcCccc
Confidence 9999999999999999998 999 888643210 11467778888888764 34577889999999999888
Q ss_pred CCcccc---CCCCCcccCCcCC
Q 012224 227 IPKCLE---YLPSTSFQGNCLQ 245 (468)
Q Consensus 227 ip~~~~---~l~~~~~~~n~~~ 245 (468)
+| .+. ++..+.+++|.+.
T Consensus 346 ip-~~~~l~~L~~L~L~~N~l~ 366 (636)
T 4eco_A 346 LP-AFGSEIKLASLNLAYNQIT 366 (636)
T ss_dssp CC-CCEEEEEESEEECCSSEEE
T ss_pred hh-hhCCCCCCCEEECCCCccc
Confidence 88 553 3444556666443
No 4
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.94 E-value=9e-28 Score=261.89 Aligned_cols=212 Identities=22% Similarity=0.301 Sum_probs=172.6
Q ss_pred chhHHHHHHHHHHhcccCCCCCCCCCCCCC----CCC--CCc------------cceeeCCCCCCEEEEEecCCCCcccC
Q 012224 25 ATNEFWALTTFKEAIYEDPHLVLSNWNALD----ADP--CHW------------TGIACSDARDRVLKINISGSSLKGFL 86 (468)
Q Consensus 25 ~~~~~~aL~~~k~~~~~~~~~~l~~w~~~~----~~~--c~w------------~gv~C~~~~~~v~~L~L~~n~l~g~~ 86 (468)
..+|+.||++||+++. +| +|+..+ .+| |.| .||+|+. .++|+.|+|++++|.|.+
T Consensus 267 ~~~d~~ALl~~k~~l~-~~-----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~-~~~V~~L~Ls~~~L~G~i 339 (876)
T 4ecn_A 267 YIKDYKALKAIWEALD-GK-----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDN-NGRVTGLSLAGFGAKGRV 339 (876)
T ss_dssp HHHHHHHHHHHHHHTT-GG-----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECT-TSCEEEEECTTTCCEEEE
T ss_pred chHHHHHHHHHHHHcC-CC-----CCCcCCCcccccCCccccccccccccccCcCceEecC-CCCEEEEECccCCCCCcC
Confidence 4579999999999984 54 786543 456 999 9999986 689999999999999999
Q ss_pred CccccCCCCCCEEEc-cCcccccc--------------------------------------------------------
Q 012224 87 APELGLLTYLQELIL-HGNNLIGI-------------------------------------------------------- 109 (468)
Q Consensus 87 p~~l~~l~~L~~L~L-s~N~l~g~-------------------------------------------------------- 109 (468)
|+.+++|++|++|+| ++|.++|.
T Consensus 340 p~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~~ 419 (876)
T 4ecn_A 340 PDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKK 419 (876)
T ss_dssp CGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCCC
T ss_pred chHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCcccccccc
Confidence 999999999999999 88876655
Q ss_pred --------------------CChhhcCCCCCCEEEccCCCCCC-----------------CCCcCCC--CCcccceeecc
Q 012224 110 --------------------IPKELGLLKRLKILDLGTNQLTG-----------------PIPPEIG--NLTGLVKINLQ 150 (468)
Q Consensus 110 --------------------ip~~~~~l~~L~~L~Ls~N~l~g-----------------~iP~~~~--~l~~L~~L~Ls 150 (468)
||..|++|++|++|+|++|+|+| .+|..++ ++++|++|+|+
T Consensus 420 ~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls 499 (876)
T 4ecn_A 420 DSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELY 499 (876)
T ss_dssp CCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEE
T ss_pred ccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECc
Confidence 88999999999999999999998 4999988 99999999999
Q ss_pred cccCcccCChhccCCCCCcEEeccCCC-CCc-cCCCCCCc-----cccccccccccCCCCccC------ccCCCCCCEEE
Q 012224 151 SNGLTGRLPAELGNLISLEELHLDRNR-LQG-AVPAGSNS-----GYTANIHGMYASSANLTG------LCHLSQLKVAD 217 (468)
Q Consensus 151 ~N~l~g~~p~~l~~l~~L~~L~ls~N~-l~g-~ip~~~~~-----~~~~~l~~~~ls~n~l~~------~~~l~~L~~l~ 217 (468)
+|++.|.+|..++++++|+.|+|++|+ ++| .+|..... ....++..+++++|.++. +..+++|+.|+
T Consensus 500 ~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~~ip~~~~l~~L~~L~~L~ 579 (876)
T 4ecn_A 500 NCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLEEFPASASLQKMVKLGLLD 579 (876)
T ss_dssp SCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCCBCCCHHHHTTCTTCCEEE
T ss_pred CCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCCccCChhhhhcCCCCCEEE
Confidence 999999999999999999999999998 998 77753211 011256667777777653 34566777777
Q ss_pred cccCcCccCCCccccCCC---CCcccCCcCC
Q 012224 218 FSYNFFVGSIPKCLEYLP---STSFQGNCLQ 245 (468)
Q Consensus 218 ls~N~l~g~ip~~~~~l~---~~~~~~n~~~ 245 (468)
+++|+++ .+| .+..++ .+.+++|.+.
T Consensus 580 Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~ 608 (876)
T 4ecn_A 580 CVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE 608 (876)
T ss_dssp CTTSCCC-BCC-CCCTTSEESEEECCSSCCS
T ss_pred CCCCCcc-cch-hhcCCCcceEEECcCCccc
Confidence 7777777 676 554443 3455666554
No 5
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.94 E-value=1.2e-27 Score=234.68 Aligned_cols=217 Identities=18% Similarity=0.255 Sum_probs=182.8
Q ss_pred CchhHHHHHHHHHHhcccCCCCCCCCCC---CCCCCCCCccceeeCC--------CCCCEEEEEecCCCCcccCCccccC
Q 012224 24 FATNEFWALTTFKEAIYEDPHLVLSNWN---ALDADPCHWTGIACSD--------ARDRVLKINISGSSLKGFLAPELGL 92 (468)
Q Consensus 24 ~~~~~~~aL~~~k~~~~~~~~~~l~~w~---~~~~~~c~w~gv~C~~--------~~~~v~~L~L~~n~l~g~~p~~l~~ 92 (468)
+..+|..||++||..+..|+.+.+.+|. ....++|.|.|+.|.. ...+|+.|+|++|.++ .+|+.++.
T Consensus 24 ~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~l~~ 102 (328)
T 4fcg_A 24 ALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQAFR 102 (328)
T ss_dssp CCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSCGGG
T ss_pred cCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChhhhh
Confidence 5678999999999998778877778894 3456899999999951 2468999999999998 78999999
Q ss_pred CCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCCCcCCCCCcccceeecccccCcccCChhccC--------
Q 012224 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGN-------- 164 (468)
Q Consensus 93 l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~-------- 164 (468)
+++|++|+|++|.++ .+|..++++++|++|+|++|+++ .+|..++.+++|++|+|++|++.+.+|..++.
T Consensus 103 l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~ 180 (328)
T 4fcg_A 103 LSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQ 180 (328)
T ss_dssp GTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEE
T ss_pred CCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhc
Confidence 999999999999999 89999999999999999999999 89999999999999999999999999988765
Q ss_pred -CCCCcEEeccCCCCCccCCCCCCccccccccccccCCCCccCc----cCCCCCCEEEcccCcCccCCCccccCCCC---
Q 012224 165 -LISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL----CHLSQLKVADFSYNFFVGSIPKCLEYLPS--- 236 (468)
Q Consensus 165 -l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~~----~~l~~L~~l~ls~N~l~g~ip~~~~~l~~--- 236 (468)
+++|++|++++|.++ .+|..... ..++..+++++|.++++ ..+++|+.|++++|++.+.+|..+..++.
T Consensus 181 ~l~~L~~L~L~~n~l~-~lp~~l~~--l~~L~~L~L~~N~l~~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~ 257 (328)
T 4fcg_A 181 GLVNLQSLRLEWTGIR-SLPASIAN--LQNLKSLKIRNSPLSALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKR 257 (328)
T ss_dssp ESTTCCEEEEEEECCC-CCCGGGGG--CTTCCEEEEESSCCCCCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCE
T ss_pred cCCCCCEEECcCCCcC-cchHhhcC--CCCCCEEEccCCCCCcCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCE
Confidence 899999999999998 78764322 24677888888888764 46788999999999999999987765544
Q ss_pred CcccCCcCCC
Q 012224 237 TSFQGNCLQN 246 (468)
Q Consensus 237 ~~~~~n~~~~ 246 (468)
+++++|.+..
T Consensus 258 L~L~~n~~~~ 267 (328)
T 4fcg_A 258 LILKDCSNLL 267 (328)
T ss_dssp EECTTCTTCC
T ss_pred EECCCCCchh
Confidence 5667764443
No 6
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.89 E-value=2.2e-23 Score=226.99 Aligned_cols=175 Identities=29% Similarity=0.421 Sum_probs=104.9
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCCCcCCCCCcccceeecc
Q 012224 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (468)
Q Consensus 71 ~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls 150 (468)
+++.|+|++|.++|.+|..++.+++|++|+|++|.++|.+|..++.+++|++|+|++|+++|.+|..++.+++|+.|+|+
T Consensus 467 ~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls 546 (768)
T 3rgz_A 467 TLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLN 546 (768)
T ss_dssp TCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECC
T ss_pred CceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECC
Confidence 56666666666666666666666666666666666666666666666666666666666666666666666666666666
Q ss_pred cccCcccCChhcc-------------------------------------------------------------------
Q 012224 151 SNGLTGRLPAELG------------------------------------------------------------------- 163 (468)
Q Consensus 151 ~N~l~g~~p~~l~------------------------------------------------------------------- 163 (468)
+|.++|.+|..+.
T Consensus 547 ~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~ 626 (768)
T 3rgz_A 547 TNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSP 626 (768)
T ss_dssp SSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCC
T ss_pred CCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCch
Confidence 6666655554332
Q ss_pred ---CCCCCcEEeccCCCCCccCCCCCCccccccccccccCCCCccC-----ccCCCCCCEEEcccCcCccCCCccccCCC
Q 012224 164 ---NLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSYNFFVGSIPKCLEYLP 235 (468)
Q Consensus 164 ---~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~-----~~~l~~L~~l~ls~N~l~g~ip~~~~~l~ 235 (468)
.+++|+.|||++|+++|.+|..... ...+..+++++|++++ +..+++|+.|||++|+++|.+|..+..++
T Consensus 627 ~~~~l~~L~~LdLs~N~l~g~ip~~l~~--l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~ 704 (768)
T 3rgz_A 627 TFDNNGSMMFLDMSYNMLSGYIPKEIGS--MPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALT 704 (768)
T ss_dssp SCSSSBCCCEEECCSSCCBSCCCGGGGG--CTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCC
T ss_pred hhhccccccEEECcCCcccccCCHHHhc--cccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCC
Confidence 2345666666666666666653221 1334555666666654 33456666666666666666665554433
Q ss_pred ---CCcccCCcCCCC
Q 012224 236 ---STSFQGNCLQNK 247 (468)
Q Consensus 236 ---~~~~~~n~~~~~ 247 (468)
.+++++|.+.+.
T Consensus 705 ~L~~L~ls~N~l~g~ 719 (768)
T 3rgz_A 705 MLTEIDLSNNNLSGP 719 (768)
T ss_dssp CCSEEECCSSEEEEE
T ss_pred CCCEEECcCCccccc
Confidence 344555554443
No 7
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.87 E-value=3.8e-21 Score=182.89 Aligned_cols=170 Identities=22% Similarity=0.253 Sum_probs=98.9
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCCCcCCCCCcccceeecc
Q 012224 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (468)
Q Consensus 71 ~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls 150 (468)
.++.|+|++|.+++..+..+..+++|++|+|++|.++...+..|.++++|++|+|++|++++..+..+..+++|++|+|+
T Consensus 38 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 117 (270)
T 2o6q_A 38 DTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLD 117 (270)
T ss_dssp TCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECC
T ss_pred CCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECC
Confidence 35666666666665555566666666666666666664444445666666666666666665444455666666666666
Q ss_pred cccCcccCChhccCCCCCcEEeccCCCCCccCCCCCCccccccccccccCCCCccCc-----cCCCCCCEEEcccCcCcc
Q 012224 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL-----CHLSQLKVADFSYNFFVG 225 (468)
Q Consensus 151 ~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~~-----~~l~~L~~l~ls~N~l~g 225 (468)
+|++++..|..+..+++|++|++++|.+++ +|..... ...++..+++++|.+.++ ..+++|+.|++++|++++
T Consensus 118 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~~~~~~-~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 195 (270)
T 2o6q_A 118 RNQLKSLPPRVFDSLTKLTYLSLGYNELQS-LPKGVFD-KLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKR 195 (270)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTT-TCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSC
T ss_pred CCccCeeCHHHhCcCcCCCEEECCCCcCCc-cCHhHcc-CCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCc
Confidence 666665555556666666666666666663 3322111 113455566666665542 345566666666666665
Q ss_pred CCCccccC---CCCCcccCC
Q 012224 226 SIPKCLEY---LPSTSFQGN 242 (468)
Q Consensus 226 ~ip~~~~~---l~~~~~~~n 242 (468)
..+..+.. +..+.+++|
T Consensus 196 ~~~~~~~~l~~L~~L~l~~N 215 (270)
T 2o6q_A 196 VPEGAFDSLEKLKMLQLQEN 215 (270)
T ss_dssp CCTTTTTTCTTCCEEECCSS
T ss_pred CCHHHhccccCCCEEEecCC
Confidence 44433433 333455555
No 8
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.87 E-value=1.3e-22 Score=197.37 Aligned_cols=172 Identities=27% Similarity=0.413 Sum_probs=136.5
Q ss_pred CCEEEEEecC-CCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCCCcCCCCCcccceee
Q 012224 70 DRVLKINISG-SSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (468)
Q Consensus 70 ~~v~~L~L~~-n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ 148 (468)
.+++.|+|++ |.+.+.+|..++.+++|++|+|++|.+++.+|..|.++++|++|||++|++++.+|..+..+++|++|+
T Consensus 76 ~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 155 (313)
T 1ogq_A 76 PYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGIT 155 (313)
T ss_dssp TTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEE
T ss_pred CCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEE
Confidence 5789999995 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCcccCChhccCCC-CCcEEeccCCCCCccCCCCCCccccccccccccCCCCccC-----ccCCCCCCEEEcccCc
Q 012224 149 LQSNGLTGRLPAELGNLI-SLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSYNF 222 (468)
Q Consensus 149 Ls~N~l~g~~p~~l~~l~-~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~-----~~~l~~L~~l~ls~N~ 222 (468)
|++|+++|.+|..++.++ +|++|++++|.++|.+|..... ..+..+++++|.+.+ +..+++|+.|++++|.
T Consensus 156 L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~---l~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 232 (313)
T 1ogq_A 156 FDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFAN---LNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNS 232 (313)
T ss_dssp CCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGG---CCCSEEECCSSEEEECCGGGCCTTSCCSEEECCSSE
T ss_pred CcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhC---CcccEEECcCCcccCcCCHHHhcCCCCCEEECCCCc
Confidence 999999999999999998 9999999999999988875433 125555666665543 2344555555555555
Q ss_pred CccCCCc--cccCCCCCcccCCcC
Q 012224 223 FVGSIPK--CLEYLPSTSFQGNCL 244 (468)
Q Consensus 223 l~g~ip~--~~~~l~~~~~~~n~~ 244 (468)
+++.+|. .+.++..+++++|.+
T Consensus 233 l~~~~~~~~~l~~L~~L~Ls~N~l 256 (313)
T 1ogq_A 233 LAFDLGKVGLSKNLNGLDLRNNRI 256 (313)
T ss_dssp ECCBGGGCCCCTTCCEEECCSSCC
T ss_pred eeeecCcccccCCCCEEECcCCcc
Confidence 5554443 112333344444433
No 9
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.87 E-value=7e-22 Score=180.40 Aligned_cols=176 Identities=20% Similarity=0.247 Sum_probs=147.4
Q ss_pred CCCccceeeCCC---------CCCEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccC
Q 012224 57 PCHWTGIACSDA---------RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGT 127 (468)
Q Consensus 57 ~c~w~gv~C~~~---------~~~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~ 127 (468)
.|.|++|.|... ..+++.|+|++|.+++..+..++.+++|++|+|++|.+++..+..|..+++|++|+|++
T Consensus 6 ~C~~~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~ 85 (208)
T 2o6s_A 6 SCSGTTVECYSQGRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLST 85 (208)
T ss_dssp EEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred EECCCEEEecCCCccCCCCCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCC
Confidence 478999999742 24699999999999987777789999999999999999977667789999999999999
Q ss_pred CCCCCCCCcCCCCCcccceeecccccCcccCChhccCCCCCcEEeccCCCCCccCCCCCCccccccccccccCCCCccCc
Q 012224 128 NQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL 207 (468)
Q Consensus 128 N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~~ 207 (468)
|++++..+..+..+++|++|+|++|++++..+..+..+++|++|++++|.+++..+..... ..++..+++++|.+.+
T Consensus 86 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~--l~~L~~L~l~~N~~~~- 162 (208)
T 2o6s_A 86 NQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDR--LTSLQYIWLHDNPWDC- 162 (208)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTT--CTTCCEEECCSCCBCC-
T ss_pred CcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhcc--CCCccEEEecCCCeec-
Confidence 9999766666899999999999999999776777899999999999999999544432221 2467788899997764
Q ss_pred cCCCCCCEEEcccCcCccCCCccccCCCC
Q 012224 208 CHLSQLKVADFSYNFFVGSIPKCLEYLPS 236 (468)
Q Consensus 208 ~~l~~L~~l~ls~N~l~g~ip~~~~~l~~ 236 (468)
.+++|+.|+++.|+++|.+|..++.++.
T Consensus 163 -~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 163 -TCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp -CTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred -CCCCHHHHHHHHHhCCceeeccCccccC
Confidence 4557899999999999999988876654
No 10
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.85 E-value=1.8e-23 Score=215.80 Aligned_cols=169 Identities=22% Similarity=0.209 Sum_probs=115.5
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEcc-------------------CCCCC
Q 012224 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLG-------------------TNQLT 131 (468)
Q Consensus 71 ~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls-------------------~N~l~ 131 (468)
+|+.|+|++|.+++..|..++.+++|++|+|++|.+++.+| +..+++|++|||+ +|.++
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~~~~L~~L~L~~N~l~ 112 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNIS 112 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEECTTCCEEECCSSCCC
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCCCCCcCEEECcCCcCC
Confidence 45555555555555444555555555555555555554443 4455555554444 44444
Q ss_pred CCCCcCCCCCcccceeecccccCcccCChhccCCCCCcEEeccCCCCCccCCCCCCccccccccccccCCCCccCc---c
Q 012224 132 GPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL---C 208 (468)
Q Consensus 132 g~iP~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~~---~ 208 (468)
+..+ ..+++|+.|+|++|.+++..|..++.+++|+.|+|++|.+++.+|..... ....+..+++++|.++++ .
T Consensus 113 ~~~~---~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~-~l~~L~~L~Ls~N~l~~~~~~~ 188 (487)
T 3oja_A 113 RVSC---SRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAA-SSDTLEHLNLQYNFIYDVKGQV 188 (487)
T ss_dssp CEEE---CCCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGG-GTTTCCEEECTTSCCCEEECCC
T ss_pred CCCc---cccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhh-hCCcccEEecCCCccccccccc
Confidence 3333 23578999999999999888889999999999999999999877764431 124678889999998764 4
Q ss_pred CCCCCCEEEcccCcCccCCCccc---cCCCCCcccCCcCCC
Q 012224 209 HLSQLKVADFSYNFFVGSIPKCL---EYLPSTSFQGNCLQN 246 (468)
Q Consensus 209 ~l~~L~~l~ls~N~l~g~ip~~~---~~l~~~~~~~n~~~~ 246 (468)
.+++|+.|+|++|.+++..|. + .++..+++++|.+..
T Consensus 189 ~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~ 228 (487)
T 3oja_A 189 VFAKLKTLDLSSNKLAFMGPE-FQSAAGVTWISLRNNKLVL 228 (487)
T ss_dssp CCTTCCEEECCSSCCCEECGG-GGGGTTCSEEECTTSCCCE
T ss_pred cCCCCCEEECCCCCCCCCCHh-HcCCCCccEEEecCCcCcc
Confidence 578999999999999976554 4 455667788886654
No 11
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.85 E-value=9.5e-21 Score=178.18 Aligned_cols=183 Identities=20% Similarity=0.249 Sum_probs=114.4
Q ss_pred CCCCccceeeCCCCCCEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCCC
Q 012224 56 DPCHWTGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIP 135 (468)
Q Consensus 56 ~~c~w~gv~C~~~~~~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP 135 (468)
+||.|.|..|.. ..+.++++++.++. +|..+. +.|+.|+|++|.+++..|..|.++++|++|+|++|++++..|
T Consensus 3 ~Cp~~~gC~C~~---~~~~l~~~~~~l~~-~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 76 (251)
T 3m19_A 3 TCETVTGCTCNE---GKKEVDCQGKSLDS-VPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSA 76 (251)
T ss_dssp -CHHHHSSEEEG---GGTEEECTTCCCSS-CCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCT
T ss_pred cCCCCCceEcCC---CCeEEecCCCCccc-cCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCH
Confidence 366888888842 33456666666663 454443 466667777777766666666666777777777777766656
Q ss_pred cCCCCCcccceeecccccCcccCChhccCCCCCcEEeccCCCCCccCCCCCCccccccccccccCCCCccCc-----cCC
Q 012224 136 PEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL-----CHL 210 (468)
Q Consensus 136 ~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~~-----~~l 210 (468)
..+..+++|++|+|++|++++..|..+..+++|++|+|++|.+++..+..... ..++..+++++|.+.++ ..+
T Consensus 77 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~--l~~L~~L~Ls~N~l~~~~~~~~~~l 154 (251)
T 3m19_A 77 GVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDR--LTKLKELRLNTNQLQSIPAGAFDKL 154 (251)
T ss_dssp TTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTT--CTTCCEEECCSSCCCCCCTTTTTTC
T ss_pred hHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhcc--CCcccEEECcCCcCCccCHHHcCcC
Confidence 56666677777777777766555555666667777777777666333222111 13455566666666543 346
Q ss_pred CCCCEEEcccCcCccCCCccccC---CCCCcccCCcCCC
Q 012224 211 SQLKVADFSYNFFVGSIPKCLEY---LPSTSFQGNCLQN 246 (468)
Q Consensus 211 ~~L~~l~ls~N~l~g~ip~~~~~---l~~~~~~~n~~~~ 246 (468)
++|+.|++++|++++..|..+.. +..+.+++|.+..
T Consensus 155 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 193 (251)
T 3m19_A 155 TNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDC 193 (251)
T ss_dssp TTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCT
T ss_pred cCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeC
Confidence 77888888888888766655544 4445677775443
No 12
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.84 E-value=8.4e-21 Score=185.82 Aligned_cols=173 Identities=18% Similarity=0.246 Sum_probs=145.6
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCCCcCCCC---------
Q 012224 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGN--------- 140 (468)
Q Consensus 70 ~~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~--------- 140 (468)
.++++|+|++|.++ .+|..++.+++|++|+|++|.++ .+|..+.++++|++|+|++|++.+.+|..++.
T Consensus 104 ~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~ 181 (328)
T 4fcg_A 104 SHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQG 181 (328)
T ss_dssp TTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEE
T ss_pred CCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhcc
Confidence 47899999999999 89999999999999999999999 88999999999999999999999999988765
Q ss_pred CcccceeecccccCcccCChhccCCCCCcEEeccCCCCCccCCCCCCccccccccccccCCCCccC-----ccCCCCCCE
Q 012224 141 LTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKV 215 (468)
Q Consensus 141 l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~-----~~~l~~L~~ 215 (468)
+++|++|+|++|+++ .+|..++.+++|++|++++|.+++ +|.... ...++..+++++|++.+ +..+++|+.
T Consensus 182 l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~--~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~ 257 (328)
T 4fcg_A 182 LVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIH--HLPKLEELDLRGCTALRNYPPIFGGRAPLKR 257 (328)
T ss_dssp STTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGG--GCTTCCEEECTTCTTCCBCCCCTTCCCCCCE
T ss_pred CCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-Cchhhc--cCCCCCEEECcCCcchhhhHHHhcCCCCCCE
Confidence 999999999999999 899999999999999999999995 554321 22467788888887754 456788999
Q ss_pred EEcccCcCccCCCccccCCC---CCcccCCcCCCCC
Q 012224 216 ADFSYNFFVGSIPKCLEYLP---STSFQGNCLQNKD 248 (468)
Q Consensus 216 l~ls~N~l~g~ip~~~~~l~---~~~~~~n~~~~~~ 248 (468)
|++++|++.+.+|..+..++ .+++++|.+.+..
T Consensus 258 L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~i 293 (328)
T 4fcg_A 258 LILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRL 293 (328)
T ss_dssp EECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCC
T ss_pred EECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhc
Confidence 99999999999998776554 4567887555543
No 13
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.84 E-value=2.8e-20 Score=172.48 Aligned_cols=153 Identities=27% Similarity=0.335 Sum_probs=130.1
Q ss_pred CCCCCCccceeeCCC---------CCCEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEE
Q 012224 54 DADPCHWTGIACSDA---------RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILD 124 (468)
Q Consensus 54 ~~~~c~w~gv~C~~~---------~~~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ 124 (468)
+...|+|++|.|... ..+++.|+|++|.+++..|..+..+++|++|+|++|.+++..+..|..+++|++|+
T Consensus 15 ~~~~Cs~~~v~c~~~~l~~ip~~~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~ 94 (229)
T 3e6j_A 15 SQCSCSGTTVDCRSKRHASVPAGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLD 94 (229)
T ss_dssp TTCEEETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCEEeCCEeEccCCCcCccCCCCCCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEE
Confidence 356899999999741 24688999999999998888999999999999999999866566689999999999
Q ss_pred ccCCCCCCCCCcCCCCCcccceeecccccCcccCChhccCCCCCcEEeccCCCCCccCCCCCCccccccccccccCCCCc
Q 012224 125 LGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANL 204 (468)
Q Consensus 125 Ls~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l 204 (468)
|++|+|++..+..+..+++|+.|+|++|+++ .+|..+..+++|++|+|++|++++ +|..
T Consensus 95 Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~-~~~~------------------- 153 (229)
T 3e6j_A 95 LGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKS-IPHG------------------- 153 (229)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCC-CCTT-------------------
T ss_pred CCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCc-cCHH-------------------
Confidence 9999999766666889999999999999999 889999999999999999999984 4432
Q ss_pred cCccCCCCCCEEEcccCcCccCCC
Q 012224 205 TGLCHLSQLKVADFSYNFFVGSIP 228 (468)
Q Consensus 205 ~~~~~l~~L~~l~ls~N~l~g~ip 228 (468)
.+..+++|+.|++++|.+++..+
T Consensus 154 -~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 154 -AFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp -TTTTCTTCCEEECTTSCBCTTBG
T ss_pred -HHhCCCCCCEEEeeCCCccCCcc
Confidence 23456789999999999997765
No 14
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.82 E-value=1.6e-19 Score=172.94 Aligned_cols=176 Identities=22% Similarity=0.217 Sum_probs=148.8
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCC-CCCCCCcCCCCCccccee
Q 012224 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQ-LTGPIPPEIGNLTGLVKI 147 (468)
Q Consensus 69 ~~~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~-l~g~iP~~~~~l~~L~~L 147 (468)
..+++.|+|++|.+++..+..+..+++|++|+|++|.+++..|..|.++++|++|+|++|. ++...|..+..+++|++|
T Consensus 31 ~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L 110 (285)
T 1ozn_A 31 PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTL 110 (285)
T ss_dssp CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEE
T ss_pred CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEE
Confidence 3578999999999999877889999999999999999998889999999999999999997 776668889999999999
Q ss_pred ecccccCcccCChhccCCCCCcEEeccCCCCCccCCCCCCccccccccccccCCCCccC-----ccCCCCCCEEEcccCc
Q 012224 148 NLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSYNF 222 (468)
Q Consensus 148 ~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~-----~~~l~~L~~l~ls~N~ 222 (468)
+|++|.+++..|..+..+++|++|++++|.+++..+..... ..++..+++++|.+++ +..+++|+.|++++|.
T Consensus 111 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~--l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 188 (285)
T 1ozn_A 111 HLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRD--LGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNR 188 (285)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTT--CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred ECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhcc--CCCccEEECCCCcccccCHHHhcCccccCEEECCCCc
Confidence 99999999888889999999999999999998544432221 2467888999998865 4457899999999999
Q ss_pred CccCCCccccCC---CCCcccCCcCCC
Q 012224 223 FVGSIPKCLEYL---PSTSFQGNCLQN 246 (468)
Q Consensus 223 l~g~ip~~~~~l---~~~~~~~n~~~~ 246 (468)
+++..|..+..+ ..+++++|.+..
T Consensus 189 l~~~~~~~~~~l~~L~~L~l~~n~l~~ 215 (285)
T 1ozn_A 189 VAHVHPHAFRDLGRLMTLYLFANNLSA 215 (285)
T ss_dssp CCEECTTTTTTCTTCCEEECCSSCCSC
T ss_pred ccccCHhHccCcccccEeeCCCCcCCc
Confidence 999888877654 456778886654
No 15
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.81 E-value=1.2e-19 Score=167.17 Aligned_cols=150 Identities=19% Similarity=0.201 Sum_probs=122.5
Q ss_pred CCccceeeCCC---------CCCEEEEEecCCCCcccCCc-cccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccC
Q 012224 58 CHWTGIACSDA---------RDRVLKINISGSSLKGFLAP-ELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGT 127 (468)
Q Consensus 58 c~w~gv~C~~~---------~~~v~~L~L~~n~l~g~~p~-~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~ 127 (468)
|.|..+.|+.. ...++.|+|++|.|++..+. .+..+++|++|+|++|.+++..|..|.++++|++|+|++
T Consensus 11 C~~~~l~~s~n~l~~iP~~~~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 11 CEGTTVDCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred ECCCEeEeCCCCcccCccCCCCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 56888888631 23567889999998887554 478888999999999999887777888899999999999
Q ss_pred CCCCCCCCcCCCCCcccceeecccccCcccCChhccCCCCCcEEeccCCCCCccCCCCCCccccccccccccCCCCccCc
Q 012224 128 NQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL 207 (468)
Q Consensus 128 N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~~ 207 (468)
|++++..|..|..+++|++|+|++|++++..|..+..+++|++|+|++|++++..|.. +
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~---------------------~ 149 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGA---------------------F 149 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTT---------------------T
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHH---------------------h
Confidence 9998777777888899999999999998888888888899999999999888766643 3
Q ss_pred cCCCCCCEEEcccCcCccCCC
Q 012224 208 CHLSQLKVADFSYNFFVGSIP 228 (468)
Q Consensus 208 ~~l~~L~~l~ls~N~l~g~ip 228 (468)
..+++|+.|++++|.+++..+
T Consensus 150 ~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 150 DTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp TTCTTCCEEECCSCCEECSGG
T ss_pred cCCCCCCEEEecCcCCcCCCc
Confidence 457789999999999987765
No 16
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.81 E-value=2.9e-19 Score=164.58 Aligned_cols=149 Identities=19% Similarity=0.245 Sum_probs=127.5
Q ss_pred CCCccceeeCCC---------CCCEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccC
Q 012224 57 PCHWTGIACSDA---------RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGT 127 (468)
Q Consensus 57 ~c~w~gv~C~~~---------~~~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~ 127 (468)
.|.|..|.|... ..+++.|+|++|.|++..+..+..+++|++|+|++|.+++..|..|.++++|++|+|++
T Consensus 10 ~C~~~~v~c~~~~l~~iP~~l~~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~ 89 (220)
T 2v9t_B 10 TCSNNIVDCRGKGLTEIPTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYG 89 (220)
T ss_dssp EEETTEEECTTSCCSSCCSSCCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCS
T ss_pred EECCCEEEcCCCCcCcCCCccCcCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCC
Confidence 367899999731 24689999999999988777899999999999999999998899999999999999999
Q ss_pred CCCCCCCCcCCCCCcccceeecccccCcccCChhccCCCCCcEEeccCCCCCccCCCCCCccccccccccccCCCCccCc
Q 012224 128 NQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL 207 (468)
Q Consensus 128 N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~~ 207 (468)
|+|+...+..|..+++|+.|+|++|++++..|..|..+++|++|+|++|.+++..+.. +
T Consensus 90 N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~---------------------~ 148 (220)
T 2v9t_B 90 NKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGT---------------------F 148 (220)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTT---------------------T
T ss_pred CcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHH---------------------H
Confidence 9999544455788999999999999999888999999999999999999998544432 3
Q ss_pred cCCCCCCEEEcccCcCccC
Q 012224 208 CHLSQLKVADFSYNFFVGS 226 (468)
Q Consensus 208 ~~l~~L~~l~ls~N~l~g~ 226 (468)
..+++|+.|++++|.+...
T Consensus 149 ~~l~~L~~L~L~~N~~~c~ 167 (220)
T 2v9t_B 149 SPLRAIQTMHLAQNPFICD 167 (220)
T ss_dssp TTCTTCCEEECCSSCEECS
T ss_pred hCCCCCCEEEeCCCCcCCC
Confidence 3467899999999998754
No 17
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.81 E-value=1.4e-19 Score=172.30 Aligned_cols=155 Identities=26% Similarity=0.266 Sum_probs=127.8
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCCCcCCCCCcccceeec
Q 012224 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (468)
Q Consensus 70 ~~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~L 149 (468)
.+++.|+|++|.+++. +.++.+++|++|+|++|.+++..|..+.++++|++|+|++|++++..|..+..+++|++|+|
T Consensus 63 ~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 140 (272)
T 3rfs_A 63 PNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNL 140 (272)
T ss_dssp TTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEEC
Confidence 4789999999999873 47889999999999999999877777899999999999999999777777889999999999
Q ss_pred ccccCcccCChhccCCCCCcEEeccCCCCCccCCCCCCccccccccccccCCCCccCc-----cCCCCCCEEEcccCcCc
Q 012224 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL-----CHLSQLKVADFSYNFFV 224 (468)
Q Consensus 150 s~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~~-----~~l~~L~~l~ls~N~l~ 224 (468)
++|++++..|..+..+++|+.|++++|++++..|..... ..++..+++++|++.++ ..+++|+.|++++|.++
T Consensus 141 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~--l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 218 (272)
T 3rfs_A 141 AHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDK--LTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWD 218 (272)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTT--CTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred CCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcC--CccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcc
Confidence 999999777777888999999999999998655433221 24677888888888763 45788999999999988
Q ss_pred cCCC
Q 012224 225 GSIP 228 (468)
Q Consensus 225 g~ip 228 (468)
+..|
T Consensus 219 ~~~~ 222 (272)
T 3rfs_A 219 CTCP 222 (272)
T ss_dssp CCTT
T ss_pred ccCc
Confidence 7766
No 18
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.80 E-value=3.3e-19 Score=170.77 Aligned_cols=176 Identities=19% Similarity=0.161 Sum_probs=149.3
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCCEEEccCcc-ccccCChhhcCCCCCCEEEccCCCCCCCCCcCCCCCccccee
Q 012224 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNN-LIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKI 147 (468)
Q Consensus 69 ~~~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~-l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L 147 (468)
..+++.|+|++|.+++..|..+..+++|++|+|++|. +....|..+..+++|++|+|++|++++..|..+..+++|++|
T Consensus 55 ~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 134 (285)
T 1ozn_A 55 CRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYL 134 (285)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEE
Confidence 3589999999999999889999999999999999998 776668899999999999999999998888899999999999
Q ss_pred ecccccCcccCChhccCCCCCcEEeccCCCCCccCCCCCCccccccccccccCCCCccC-----ccCCCCCCEEEcccCc
Q 012224 148 NLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSYNF 222 (468)
Q Consensus 148 ~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~-----~~~l~~L~~l~ls~N~ 222 (468)
+|++|++++..+..+..+++|++|++++|.+++..+..... ..++..+++++|.+.+ +..+++|+.|++++|.
T Consensus 135 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~--l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 212 (285)
T 1ozn_A 135 YLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRG--LHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANN 212 (285)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTT--CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred ECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcC--ccccCEEECCCCcccccCHhHccCcccccEeeCCCCc
Confidence 99999999776777999999999999999999544432221 2467888999998865 4567899999999999
Q ss_pred CccCCCccccC---CCCCcccCCcCCC
Q 012224 223 FVGSIPKCLEY---LPSTSFQGNCLQN 246 (468)
Q Consensus 223 l~g~ip~~~~~---l~~~~~~~n~~~~ 246 (468)
+++..|..+.. +..+++++|.+..
T Consensus 213 l~~~~~~~~~~l~~L~~L~l~~N~~~c 239 (285)
T 1ozn_A 213 LSALPTEALAPLRALQYLRLNDNPWVC 239 (285)
T ss_dssp CSCCCHHHHTTCTTCCEEECCSSCEEC
T ss_pred CCcCCHHHcccCcccCEEeccCCCccC
Confidence 99876665654 4556788885544
No 19
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.80 E-value=1.1e-19 Score=175.77 Aligned_cols=188 Identities=19% Similarity=0.206 Sum_probs=145.7
Q ss_pred CCCccceeeCCC---------CCCEEEEEecCCCCcccCCccccCCCCCCEEEccCcccc--ccCChhhcCCCCCCEEEc
Q 012224 57 PCHWTGIACSDA---------RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLI--GIIPKELGLLKRLKILDL 125 (468)
Q Consensus 57 ~c~w~gv~C~~~---------~~~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~--g~ip~~~~~l~~L~~L~L 125 (468)
.|.|+++.|... ..+++.|+|++|.++...+..+..+++|++|+|++|.++ +.+|..+..+++|++|+|
T Consensus 6 ~C~~~~l~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L 85 (306)
T 2z66_A 6 SCSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDL 85 (306)
T ss_dssp EEETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEEC
T ss_pred eeCCCEEEcCCCCcccCCCCCCCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEEC
Confidence 378999999741 247999999999999644445799999999999999998 445777888999999999
Q ss_pred cCCCCCCCCCcCCCCCcccceeecccccCcccCC-hhccCCCCCcEEeccCCCCCccCCCCCCccccccccccccCCCCc
Q 012224 126 GTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLP-AELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANL 204 (468)
Q Consensus 126 s~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~~p-~~l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l 204 (468)
++|.++ .+|..+..+++|++|+|++|++++..+ ..+..+++|++|++++|.+++..|..... ..++..+++++|.+
T Consensus 86 s~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~--l~~L~~L~l~~n~l 162 (306)
T 2z66_A 86 SFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNG--LSSLEVLKMAGNSF 162 (306)
T ss_dssp CSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTT--CTTCCEEECTTCEE
T ss_pred CCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhccc--CcCCCEEECCCCcc
Confidence 999988 578888889999999999999885544 57888899999999999888766654322 24566778888876
Q ss_pred cC------ccCCCCCCEEEcccCcCccCCCccccCC---CCCcccCCcCCCC
Q 012224 205 TG------LCHLSQLKVADFSYNFFVGSIPKCLEYL---PSTSFQGNCLQNK 247 (468)
Q Consensus 205 ~~------~~~l~~L~~l~ls~N~l~g~ip~~~~~l---~~~~~~~n~~~~~ 247 (468)
.+ +..+++|+.|++++|.+++..|..+..+ ..+++++|.+...
T Consensus 163 ~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 214 (306)
T 2z66_A 163 QENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSL 214 (306)
T ss_dssp GGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBC
T ss_pred ccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCcc
Confidence 54 4567788888888888888777766544 4456777765543
No 20
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.80 E-value=6.7e-20 Score=187.21 Aligned_cols=150 Identities=22% Similarity=0.219 Sum_probs=117.5
Q ss_pred CCCCccc--eeeCCC--------CCCEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccC-ChhhcCCCCCCEEE
Q 012224 56 DPCHWTG--IACSDA--------RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGII-PKELGLLKRLKILD 124 (468)
Q Consensus 56 ~~c~w~g--v~C~~~--------~~~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~i-p~~~~~l~~L~~L~ 124 (468)
+.|.|.+ |.|... ..++++|+|++|.+++..|..++.+++|++|+|++|.+.+.+ |..|.++++|++||
T Consensus 6 ~~c~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~ 85 (455)
T 3v47_A 6 SECSVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILK 85 (455)
T ss_dssp -CCEEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEE
T ss_pred ceeEEEccccCcCCCCcccCCCCCCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEe
Confidence 4566655 777632 257899999999999988889999999999999999998766 45688999999999
Q ss_pred ccCCCCCCCCCcCCCCCcccceeecccccCcccCChh--ccCCCCCcEEeccCCCCCccCCCCCCccccccccccccCCC
Q 012224 125 LGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAE--LGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSA 202 (468)
Q Consensus 125 Ls~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~~p~~--l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n 202 (468)
|++|++++..|..|+.+++|++|+|++|++++.+|.. +..+++|++|++++|.+++..|..... ...++..+++++|
T Consensus 86 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~-~l~~L~~L~L~~n 164 (455)
T 3v47_A 86 LDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFL-NMRRFHVLDLTFN 164 (455)
T ss_dssp CTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGG-GCTTCCEEECTTC
T ss_pred CCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccC-CCCcccEEeCCCC
Confidence 9999999888888999999999999999998866665 888889999999999988776653211 1134556666666
Q ss_pred CccC
Q 012224 203 NLTG 206 (468)
Q Consensus 203 ~l~~ 206 (468)
.+.+
T Consensus 165 ~l~~ 168 (455)
T 3v47_A 165 KVKS 168 (455)
T ss_dssp CBSC
T ss_pred cccc
Confidence 6544
No 21
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.80 E-value=5.7e-19 Score=180.43 Aligned_cols=185 Identities=19% Similarity=0.186 Sum_probs=142.6
Q ss_pred ccceeeCC---------CCCCEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCC
Q 012224 60 WTGIACSD---------ARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQL 130 (468)
Q Consensus 60 w~gv~C~~---------~~~~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l 130 (468)
|..|.|.. ...+++.|+|++|++++..|..|..+++|++|+|++|.+++..|..|.++++|++|+|++|++
T Consensus 56 ~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l 135 (452)
T 3zyi_A 56 FSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWL 135 (452)
T ss_dssp SCEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred CcEEEECCCCcCccCCCCCCCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcC
Confidence 56778863 124789999999999999999999999999999999999998889999999999999999999
Q ss_pred CCCCCcCCCCCcccceeecccccCcccCChhccCCCCCcEEeccCCCCCccCCCCCCccccccccccccCCCCccCc---
Q 012224 131 TGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL--- 207 (468)
Q Consensus 131 ~g~iP~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~~--- 207 (468)
++..+..+..+++|++|+|++|++++..+..+.++++|+.|++++|+..+.+|...... ..++..+++++|+++++
T Consensus 136 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~-l~~L~~L~L~~n~l~~~~~~ 214 (452)
T 3zyi_A 136 TVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEG-LFNLKYLNLGMCNIKDMPNL 214 (452)
T ss_dssp SBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTT-CTTCCEEECTTSCCSSCCCC
T ss_pred CccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccC-CCCCCEEECCCCcccccccc
Confidence 97666679999999999999999996666678888888888888866655666543221 23566667777766553
Q ss_pred cCCCCCCEEEcccCcCccCCCccccCCC---CCcccCCcCC
Q 012224 208 CHLSQLKVADFSYNFFVGSIPKCLEYLP---STSFQGNCLQ 245 (468)
Q Consensus 208 ~~l~~L~~l~ls~N~l~g~ip~~~~~l~---~~~~~~n~~~ 245 (468)
..+++|+.|++++|++++..|..+..++ .+.+++|.+.
T Consensus 215 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~ 255 (452)
T 3zyi_A 215 TPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVS 255 (452)
T ss_dssp TTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCC
T ss_pred cccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCc
Confidence 3455677777777777766666554433 3445555443
No 22
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.80 E-value=3.7e-20 Score=197.32 Aligned_cols=174 Identities=17% Similarity=0.286 Sum_probs=148.6
Q ss_pred CCCEEEEEecCCCCccc-----------------CCcccc--CCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCC
Q 012224 69 RDRVLKINISGSSLKGF-----------------LAPELG--LLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQ 129 (468)
Q Consensus 69 ~~~v~~L~L~~n~l~g~-----------------~p~~l~--~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~ 129 (468)
..+++.|+|++|.++|. +|..++ ++++|++|+|++|.+.|.+|..|+++++|++|+|++|+
T Consensus 205 l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~ 284 (636)
T 4eco_A 205 LTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNR 284 (636)
T ss_dssp CTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCT
T ss_pred ccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCC
Confidence 35899999999999996 999999 99999999999999999999999999999999999998
Q ss_pred -CCC-CCCcCCCCC------cccceeecccccCcccCCh--hccCCCCCcEEeccCCCCCccCCCCCCcccccccccccc
Q 012224 130 -LTG-PIPPEIGNL------TGLVKINLQSNGLTGRLPA--ELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYA 199 (468)
Q Consensus 130 -l~g-~iP~~~~~l------~~L~~L~Ls~N~l~g~~p~--~l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~l 199 (468)
++| .+|..++.+ ++|++|+|++|+++ .+|. .++++++|++|++++|.++|.+| ... ...++..+++
T Consensus 285 ~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~--~l~~L~~L~L 360 (636)
T 4eco_A 285 GISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFG--SEIKLASLNL 360 (636)
T ss_dssp TSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCE--EEEEESEEEC
T ss_pred CCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhC--CCCCCCEEEC
Confidence 999 899999887 99999999999999 9999 99999999999999999999999 322 2346777888
Q ss_pred CCCCccC----ccCCCC-CCEEEcccCcCccCCCccccC-----CCCCcccCCcCCCC
Q 012224 200 SSANLTG----LCHLSQ-LKVADFSYNFFVGSIPKCLEY-----LPSTSFQGNCLQNK 247 (468)
Q Consensus 200 s~n~l~~----~~~l~~-L~~l~ls~N~l~g~ip~~~~~-----l~~~~~~~n~~~~~ 247 (468)
++|.+.. +..+++ |+.|++++|.++ .+|..+.. +..+++++|.+.+.
T Consensus 361 ~~N~l~~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~ 417 (636)
T 4eco_A 361 AYNQITEIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSV 417 (636)
T ss_dssp CSSEEEECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTT
T ss_pred CCCccccccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCc
Confidence 8887754 344667 888888888888 77776543 44566777766553
No 23
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.80 E-value=8.7e-19 Score=178.44 Aligned_cols=185 Identities=19% Similarity=0.198 Sum_probs=140.8
Q ss_pred ccceeeCC---------CCCCEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCC
Q 012224 60 WTGIACSD---------ARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQL 130 (468)
Q Consensus 60 w~gv~C~~---------~~~~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l 130 (468)
|..|.|.. ....++.|+|++|.+++..+..+..+++|++|+|++|.+++..|..|.++++|++|+|++|++
T Consensus 45 ~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l 124 (440)
T 3zyj_A 45 FSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRL 124 (440)
T ss_dssp SCEEECCSCCCSSCCSCCCTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCC
T ss_pred CCEEEeCCCCcCcCCCCCCCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcC
Confidence 56788863 124688999999999998889999999999999999999988888999999999999999999
Q ss_pred CCCCCcCCCCCcccceeecccccCcccCChhccCCCCCcEEeccCCCCCccCCCCCCccccccccccccCCCCccCc---
Q 012224 131 TGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL--- 207 (468)
Q Consensus 131 ~g~iP~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~~--- 207 (468)
++..+..|..+++|++|+|++|.+++..+..+..+++|++|++++|+..+.+|...... ..++..+++++|.++.+
T Consensus 125 ~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~-l~~L~~L~L~~n~l~~~~~~ 203 (440)
T 3zyj_A 125 TTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEG-LSNLRYLNLAMCNLREIPNL 203 (440)
T ss_dssp SSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTT-CSSCCEEECTTSCCSSCCCC
T ss_pred CeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhc-ccccCeecCCCCcCcccccc
Confidence 96666679999999999999999997666688888888888888866655666533221 23566667777766543
Q ss_pred cCCCCCCEEEcccCcCccCCCccccCCC---CCcccCCcCC
Q 012224 208 CHLSQLKVADFSYNFFVGSIPKCLEYLP---STSFQGNCLQ 245 (468)
Q Consensus 208 ~~l~~L~~l~ls~N~l~g~ip~~~~~l~---~~~~~~n~~~ 245 (468)
..+++|+.|+|++|++++..|..+..++ .+.+++|.+.
T Consensus 204 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~ 244 (440)
T 3zyj_A 204 TPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQ 244 (440)
T ss_dssp TTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCC
T ss_pred CCCcccCEEECCCCccCccChhhhccCccCCEEECCCCcee
Confidence 3455667777777777666665554433 3445555443
No 24
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.79 E-value=1.2e-18 Score=167.46 Aligned_cols=170 Identities=28% Similarity=0.280 Sum_probs=141.2
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCCCcCCCCCcccceeec
Q 012224 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (468)
Q Consensus 70 ~~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~L 149 (468)
..++.|+|++|.+++..+..+..+++|++|+|++|.+++..+ . ..+++|++|+|++|+++ .+|..+..+++|++|+|
T Consensus 31 ~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~-~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l 107 (290)
T 1p9a_G 31 KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV-D-GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDV 107 (290)
T ss_dssp TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC-C-SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEEC
T ss_pred CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccC-C-CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEEC
Confidence 578999999999999888899999999999999999996533 3 78999999999999998 88999999999999999
Q ss_pred ccccCcccCChhccCCCCCcEEeccCCCCCccCCCCCCccccccccccccCCCCccCc-----cCCCCCCEEEcccCcCc
Q 012224 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL-----CHLSQLKVADFSYNFFV 224 (468)
Q Consensus 150 s~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~~-----~~l~~L~~l~ls~N~l~ 224 (468)
++|++++..|..|..+++|++|+|++|++++..+..+.. ..++..+++++|+++.+ ..+++|+.|++++|+++
T Consensus 108 ~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~--l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~ 185 (290)
T 1p9a_G 108 SFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTP--TPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY 185 (290)
T ss_dssp CSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTT--CTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred CCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhccc--ccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC
Confidence 999999777788999999999999999999543332221 24677889999988764 45789999999999998
Q ss_pred cCCCccccC---CCCCcccCCcCC
Q 012224 225 GSIPKCLEY---LPSTSFQGNCLQ 245 (468)
Q Consensus 225 g~ip~~~~~---l~~~~~~~n~~~ 245 (468)
.+|..+.. +..+.+.+|.+.
T Consensus 186 -~ip~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 186 -TIPKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp -CCCTTTTTTCCCSEEECCSCCBC
T ss_pred -ccChhhcccccCCeEEeCCCCcc
Confidence 67766644 445667788443
No 25
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.79 E-value=6e-20 Score=178.41 Aligned_cols=174 Identities=20% Similarity=0.209 Sum_probs=124.4
Q ss_pred CCEEEEEecCCCCcccCCccc--cCCCCCCEEEccCccccccCChhhcCC-----CCCCEEEccCCCCCCCCCcCCCCCc
Q 012224 70 DRVLKINISGSSLKGFLAPEL--GLLTYLQELILHGNNLIGIIPKELGLL-----KRLKILDLGTNQLTGPIPPEIGNLT 142 (468)
Q Consensus 70 ~~v~~L~L~~n~l~g~~p~~l--~~l~~L~~L~Ls~N~l~g~ip~~~~~l-----~~L~~L~Ls~N~l~g~iP~~~~~l~ 142 (468)
.+++.|+|++|.+++.+|..+ +.+++|++|+|++|.+++. |..+..+ ++|++|+|++|++++..|..++.++
T Consensus 95 ~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~ 173 (312)
T 1wwl_A 95 SGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFP 173 (312)
T ss_dssp SCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCS
T ss_pred CCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCC
Confidence 467888888888888888776 7888888888888888876 7777776 7888888888888877777888888
Q ss_pred ccceeecccccCccc--CChhc--cCCCCCcEEeccCCCCCc--cCCCCCCccccccccccccCCCCccCcc------CC
Q 012224 143 GLVKINLQSNGLTGR--LPAEL--GNLISLEELHLDRNRLQG--AVPAGSNSGYTANIHGMYASSANLTGLC------HL 210 (468)
Q Consensus 143 ~L~~L~Ls~N~l~g~--~p~~l--~~l~~L~~L~ls~N~l~g--~ip~~~~~~~~~~l~~~~ls~n~l~~~~------~l 210 (468)
+|++|+|++|++.|. +|..+ ..+++|++|++++|.+++ .++..... ...++..+++++|.+.+.. .+
T Consensus 174 ~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~~~~~~~~l 252 (312)
T 1wwl_A 174 ALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAA-ARVQLQGLDLSHNSLRDAAGAPSCDWP 252 (312)
T ss_dssp SCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHH-TTCCCSEEECTTSCCCSSCCCSCCCCC
T ss_pred CCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHh-cCCCCCEEECCCCcCCcccchhhhhhc
Confidence 888888888887765 34455 777888888888888773 22211000 0135667778888776632 35
Q ss_pred CCCCEEEcccCcCccCCCcccc-CCCCCcccCCcCCC
Q 012224 211 SQLKVADFSYNFFVGSIPKCLE-YLPSTSFQGNCLQN 246 (468)
Q Consensus 211 ~~L~~l~ls~N~l~g~ip~~~~-~l~~~~~~~n~~~~ 246 (468)
++|+.|++++|.++ .+|..+. ++..+++++|.+..
T Consensus 253 ~~L~~L~Ls~N~l~-~ip~~~~~~L~~L~Ls~N~l~~ 288 (312)
T 1wwl_A 253 SQLNSLNLSFTGLK-QVPKGLPAKLSVLDLSYNRLDR 288 (312)
T ss_dssp TTCCEEECTTSCCS-SCCSSCCSEEEEEECCSSCCCS
T ss_pred CCCCEEECCCCccC-hhhhhccCCceEEECCCCCCCC
Confidence 67888888888887 6776654 56667777776654
No 26
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.78 E-value=3.9e-19 Score=171.94 Aligned_cols=174 Identities=20% Similarity=0.226 Sum_probs=109.4
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCC-hhhcCCCCCCEEEccCCCCCCCCCcCCCCCcccceee
Q 012224 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIP-KELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (468)
Q Consensus 70 ~~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip-~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ 148 (468)
.+++.|+|++|.+++ +|..+..+++|++|+|++|.+++..+ ..+..+++|++|++++|.+++..|..+..+++|++|+
T Consensus 78 ~~L~~L~Ls~n~i~~-l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 156 (306)
T 2z66_A 78 TSLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLK 156 (306)
T ss_dssp SCCCEEECCSCSEEE-EEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEE
T ss_pred cccCEEECCCCcccc-ChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEE
Confidence 356666666666653 55556667777777777777665443 4566677777777777777766666667777777777
Q ss_pred cccccCcc-cCChhccCCCCCcEEeccCCCCCccCCCCCCccccccccccccCCCCccCc-----cCCCCCCEEEcccCc
Q 012224 149 LQSNGLTG-RLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL-----CHLSQLKVADFSYNF 222 (468)
Q Consensus 149 Ls~N~l~g-~~p~~l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~~-----~~l~~L~~l~ls~N~ 222 (468)
|++|.+++ .+|..+..+++|++|++++|.+++..|..... ..++..+++++|.+.++ ..+++|+.||+++|+
T Consensus 157 l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~--l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 234 (306)
T 2z66_A 157 MAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNS--LSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNH 234 (306)
T ss_dssp CTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTT--CTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSC
T ss_pred CCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcC--CCCCCEEECCCCccCccChhhccCcccCCEeECCCCC
Confidence 77777765 46666777777777777777776555543321 13455666777666542 345667777777777
Q ss_pred CccCCCccccCC----CCCcccCCcCCC
Q 012224 223 FVGSIPKCLEYL----PSTSFQGNCLQN 246 (468)
Q Consensus 223 l~g~ip~~~~~l----~~~~~~~n~~~~ 246 (468)
+++..|..+..+ ..+++++|.+..
T Consensus 235 l~~~~~~~~~~~~~~L~~L~L~~N~~~~ 262 (306)
T 2z66_A 235 IMTSKKQELQHFPSSLAFLNLTQNDFAC 262 (306)
T ss_dssp CCBCSSSSCCCCCTTCCEEECTTCCEEC
T ss_pred CcccCHHHHHhhhccCCEEEccCCCeec
Confidence 777666655443 334556664443
No 27
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.78 E-value=2.6e-18 Score=163.44 Aligned_cols=174 Identities=25% Similarity=0.223 Sum_probs=145.2
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCCCcCCCCCcccceeec
Q 012224 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (468)
Q Consensus 70 ~~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~L 149 (468)
.+++.|++++|.++.. +.+..+++|++|+|++|.+++ + ..+..+++|++|+|++|++++..|..+..+++|++|+|
T Consensus 41 ~~L~~L~l~~~~i~~~--~~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 116 (272)
T 3rfs_A 41 NSIDQIIANNSDIKSV--QGIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVL 116 (272)
T ss_dssp TTCCEEECTTSCCCCC--TTGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred cceeeeeeCCCCcccc--cccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEEC
Confidence 4789999999998752 468899999999999999997 3 47899999999999999999877777899999999999
Q ss_pred ccccCcccCChhccCCCCCcEEeccCCCCCccCCCCCCccccccccccccCCCCccCc-----cCCCCCCEEEcccCcCc
Q 012224 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL-----CHLSQLKVADFSYNFFV 224 (468)
Q Consensus 150 s~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~~-----~~l~~L~~l~ls~N~l~ 224 (468)
++|++++..|..+..+++|++|++++|.+++..|..... ..++..+++++|+++++ ..+++|+.|++++|+++
T Consensus 117 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~--l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 194 (272)
T 3rfs_A 117 VENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDK--LTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLK 194 (272)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTT--CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS
T ss_pred CCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhcc--CccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCC
Confidence 999999877778999999999999999999655543221 24678889999998764 45789999999999999
Q ss_pred cCCCccccC---CCCCcccCCcCCCCCC
Q 012224 225 GSIPKCLEY---LPSTSFQGNCLQNKDP 249 (468)
Q Consensus 225 g~ip~~~~~---l~~~~~~~n~~~~~~~ 249 (468)
+..|..+.. +..+.+++|.+.+.++
T Consensus 195 ~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 222 (272)
T 3rfs_A 195 SVPDGVFDRLTSLQYIWLHDNPWDCTCP 222 (272)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred ccCHHHHhCCcCCCEEEccCCCccccCc
Confidence 888866654 4556788886665544
No 28
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.78 E-value=6.5e-19 Score=167.87 Aligned_cols=133 Identities=20% Similarity=0.189 Sum_probs=81.6
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCCCcCCCCCcccceeecc
Q 012224 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (468)
Q Consensus 71 ~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls 150 (468)
.++.|+|++|.+++..+..+..+++|++|+|++|.+++..+..|.++++|++|+|++|++++..|..+..+++|++|+++
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 108 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECC
Confidence 46667777777766555566666777777777776666555566666677777777776665555666666666666666
Q ss_pred cccCcccCChhccCCCCCcEEeccCCCCCc-cCCCCCCccccccccccccCCCCcc
Q 012224 151 SNGLTGRLPAELGNLISLEELHLDRNRLQG-AVPAGSNSGYTANIHGMYASSANLT 205 (468)
Q Consensus 151 ~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g-~ip~~~~~~~~~~l~~~~ls~n~l~ 205 (468)
+|++++..+..++.+++|++|++++|.+++ .+|..... ..++..+++++|.++
T Consensus 109 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~--l~~L~~L~Ls~N~l~ 162 (276)
T 2z62_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSN--LTNLEHLDLSSNKIQ 162 (276)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGG--CTTCCEEECCSSCCC
T ss_pred CCCccccCchhcccCCCCCEEECcCCccceecCchhhcc--CCCCCEEECCCCCCC
Confidence 666665544456666666666666666654 23432211 123444555555544
No 29
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.78 E-value=9.9e-19 Score=166.59 Aligned_cols=179 Identities=20% Similarity=0.193 Sum_probs=148.0
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCCCcCCCCCcccceee
Q 012224 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (468)
Q Consensus 69 ~~~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ 148 (468)
..+++.|+|++|.+++..+..+..+++|++|+|++|.+++..|..|.++++|++|++++|++++..+..+..+++|++|+
T Consensus 51 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 130 (276)
T 2z62_A 51 FPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELN 130 (276)
T ss_dssp CTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEE
T ss_pred ccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEE
Confidence 35899999999999988888899999999999999999998889999999999999999999987777899999999999
Q ss_pred cccccCcc-cCChhccCCCCCcEEeccCCCCCccCCCCCCcccccccc----ccccCCCCccCcc----CCCCCCEEEcc
Q 012224 149 LQSNGLTG-RLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIH----GMYASSANLTGLC----HLSQLKVADFS 219 (468)
Q Consensus 149 Ls~N~l~g-~~p~~l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~----~~~ls~n~l~~~~----~l~~L~~l~ls 219 (468)
|++|.+++ .+|..+..+++|++|++++|.+++..+..... ...+. .+++++|.+.++. ...+|+.|+++
T Consensus 131 l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~--l~~L~~l~l~L~ls~n~l~~~~~~~~~~~~L~~L~L~ 208 (276)
T 2z62_A 131 VAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRV--LHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLKELALD 208 (276)
T ss_dssp CCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHH--HHTCTTCCEEEECCSSCCCEECTTSSCSCCEEEEECC
T ss_pred CcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhh--hhhccccceeeecCCCcccccCccccCCCcccEEECC
Confidence 99999986 47999999999999999999999654432211 01122 6789999887642 33479999999
Q ss_pred cCcCccCCCccccC---CCCCcccCCcCCCCCC
Q 012224 220 YNFFVGSIPKCLEY---LPSTSFQGNCLQNKDP 249 (468)
Q Consensus 220 ~N~l~g~ip~~~~~---l~~~~~~~n~~~~~~~ 249 (468)
+|++++..+..+.. +..+.+++|.+...|+
T Consensus 209 ~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 209 TNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp SSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred CCceeecCHhHhcccccccEEEccCCcccccCC
Confidence 99999766655554 4556788997666543
No 30
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.78 E-value=4.7e-18 Score=166.39 Aligned_cols=183 Identities=20% Similarity=0.299 Sum_probs=145.4
Q ss_pred CCccceeeCCC---------CCCEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCC
Q 012224 58 CHWTGIACSDA---------RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTN 128 (468)
Q Consensus 58 c~w~gv~C~~~---------~~~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N 128 (468)
|.|..+.|... ..+++.|+|++|.+++..|..+..+++|++|+|++|.+++..|..|.++++|++|+|++|
T Consensus 33 c~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 112 (332)
T 2ft3_A 33 CHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKN 112 (332)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSS
T ss_pred ccCCEEECCCCCccccCCCCCCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCC
Confidence 68999999731 247899999999999988889999999999999999999988999999999999999999
Q ss_pred CCCCCCCcCCCCCcccceeecccccCcccCChhccCCCCCcEEeccCCCCCc--cCCCCCCccccccccccccCCCCccC
Q 012224 129 QLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQG--AVPAGSNSGYTANIHGMYASSANLTG 206 (468)
Q Consensus 129 ~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g--~ip~~~~~~~~~~l~~~~ls~n~l~~ 206 (468)
+++ .+|..+. ++|++|++++|++++..+..+..+++|+.|++++|.++. ..|..... . .+..+++++|.+++
T Consensus 113 ~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~-l--~L~~L~l~~n~l~~ 186 (332)
T 2ft3_A 113 HLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDG-L--KLNYLRISEAKLTG 186 (332)
T ss_dssp CCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCS-C--CCSCCBCCSSBCSS
T ss_pred cCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccC-C--ccCEEECcCCCCCc
Confidence 999 7888776 899999999999996666679999999999999999963 44443322 1 56667777777765
Q ss_pred ccC--CCCCCEEEcccCcCccCCCccccC---CCCCcccCCcCCC
Q 012224 207 LCH--LSQLKVADFSYNFFVGSIPKCLEY---LPSTSFQGNCLQN 246 (468)
Q Consensus 207 ~~~--l~~L~~l~ls~N~l~g~ip~~~~~---l~~~~~~~n~~~~ 246 (468)
+.. .++|+.|++++|.+++..|..+.. +..+++++|.+..
T Consensus 187 l~~~~~~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~ 231 (332)
T 2ft3_A 187 IPKDLPETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRM 231 (332)
T ss_dssp CCSSSCSSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCC
T ss_pred cCccccCCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCc
Confidence 431 256777777777777766655543 4455666665544
No 31
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.78 E-value=3.3e-19 Score=186.49 Aligned_cols=187 Identities=18% Similarity=0.219 Sum_probs=154.8
Q ss_pred CCCccceeeCCC-----------CCCEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEc
Q 012224 57 PCHWTGIACSDA-----------RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDL 125 (468)
Q Consensus 57 ~c~w~gv~C~~~-----------~~~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~L 125 (468)
.|.|.|+ |+.. ..+++.|+|++|.+++..|..++.+++|++|+|++|.+++..|..|.++++|++|||
T Consensus 3 ~C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L 81 (549)
T 2z81_A 3 SCDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDL 81 (549)
T ss_dssp EECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred cCCCCce-EECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEEC
Confidence 5889997 8631 247999999999999988999999999999999999999988899999999999999
Q ss_pred cCCCCCCCCCcCCCCCcccceeecccccCcc-cCChhccCCCCCcEEeccCCCCCccCCCCCCccccccccccccCCCCc
Q 012224 126 GTNQLTGPIPPEIGNLTGLVKINLQSNGLTG-RLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANL 204 (468)
Q Consensus 126 s~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g-~~p~~l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l 204 (468)
++|++++..|..|+.+++|++|+|++|.+++ .+|..++++++|++|++++|.+.+.+|...... ..++..+++++|.+
T Consensus 82 s~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~-l~~L~~L~L~~n~l 160 (549)
T 2z81_A 82 SDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAG-LTSLNELEIKALSL 160 (549)
T ss_dssp TTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTT-CCEEEEEEEEETTC
T ss_pred CCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhc-ccccCeeeccCCcc
Confidence 9999998777779999999999999999997 568899999999999999999777787533221 24677788888877
Q ss_pred cC-----ccCCCCCCEEEcccCcCccCCCcc----ccCCCCCcccCCcCCC
Q 012224 205 TG-----LCHLSQLKVADFSYNFFVGSIPKC----LEYLPSTSFQGNCLQN 246 (468)
Q Consensus 205 ~~-----~~~l~~L~~l~ls~N~l~g~ip~~----~~~l~~~~~~~n~~~~ 246 (468)
.+ +..+++|+.|++++|.+. .+|.. +.++..+++++|.+..
T Consensus 161 ~~~~~~~l~~l~~L~~L~l~~n~~~-~~~~~~~~~l~~L~~L~L~~n~l~~ 210 (549)
T 2z81_A 161 RNYQSQSLKSIRDIHHLTLHLSESA-FLLEIFADILSSVRYLELRDTNLAR 210 (549)
T ss_dssp CEECTTTTTTCSEEEEEEEECSBST-THHHHHHHSTTTBSEEEEESCBCTT
T ss_pred cccChhhhhccccCceEecccCccc-ccchhhHhhcccccEEEccCCcccc
Confidence 65 456778888999988875 44433 4566667788886655
No 32
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.77 E-value=1.4e-18 Score=183.85 Aligned_cols=110 Identities=20% Similarity=0.209 Sum_probs=68.2
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCCCcCCCCCcccceeecc
Q 012224 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (468)
Q Consensus 71 ~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls 150 (468)
+++.|+|++|.+++..|..++.+++|++|+|++|.+++..|..|+++++|++|+|++|.+++..|..|+.+++|++|+|+
T Consensus 76 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls 155 (597)
T 3oja_B 76 QVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMS 155 (597)
T ss_dssp CCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEee
Confidence 35556666666666555566666666666666666666555556666666666666666663333334666666666666
Q ss_pred cccCcccCChhccCCCCCcEEeccCCCCCc
Q 012224 151 SNGLTGRLPAELGNLISLEELHLDRNRLQG 180 (468)
Q Consensus 151 ~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g 180 (468)
+|.+++..|..++.+++|++|++++|.+++
T Consensus 156 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 185 (597)
T 3oja_B 156 NNNLERIEDDTFQATTSLQNLQLSSNRLTH 185 (597)
T ss_dssp SSCCCBCCTTTTTTCTTCCEEECTTSCCSB
T ss_pred CCcCCCCChhhhhcCCcCcEEECcCCCCCC
Confidence 666666556666666666666666666654
No 33
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.77 E-value=4.7e-19 Score=175.72 Aligned_cols=172 Identities=23% Similarity=0.227 Sum_probs=130.3
Q ss_pred CCccceeeCCC---------CCCEEEEEecCCCCcccCCcccc-CCCCCCEEEccCccccccCChhhcCCCCCCEEEccC
Q 012224 58 CHWTGIACSDA---------RDRVLKINISGSSLKGFLAPELG-LLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGT 127 (468)
Q Consensus 58 c~w~gv~C~~~---------~~~v~~L~L~~n~l~g~~p~~l~-~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~ 127 (468)
|.|..+.|... ...++.|+|++|.|++..+..+. .+++|++|+|++|.|++..|..|.++++|++|||++
T Consensus 18 C~~~~l~c~~~~l~~iP~~~~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 18 CASNILSCSKQQLPNVPQSLPSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp EETTEEECCSSCCSSCCSSCCTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred ECCCEEEeCCCCcCccCccCCCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 56777788631 23577889999998887777776 888999999999999887777888899999999999
Q ss_pred CCCCCCCCcCCCCCcccceeecccccCcccCChhccCCCCCcEEeccCCCCCccCCCCCCccccccccccccCCCCccCc
Q 012224 128 NQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL 207 (468)
Q Consensus 128 N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~~ 207 (468)
|+|++..+..|..+++|+.|+|++|++++..|..|..+++|+.|+|++|.+++ +|.... .++
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~-l~~~~~-----------------~~~ 159 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISR-FPVELI-----------------KDG 159 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCS-CCGGGT-----------------C--
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCe-eCHHHh-----------------cCc
Confidence 99886666678888999999999999987778888888999999999998883 554211 112
Q ss_pred cCCCCCCEEEcccCcCccCCCccccCCC-----CCcccCCcCCCC
Q 012224 208 CHLSQLKVADFSYNFFVGSIPKCLEYLP-----STSFQGNCLQNK 247 (468)
Q Consensus 208 ~~l~~L~~l~ls~N~l~g~ip~~~~~l~-----~~~~~~n~~~~~ 247 (468)
..+++|+.|||++|+|++..+..+..++ .+.+.+|.+...
T Consensus 160 ~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C~ 204 (361)
T 2xot_A 160 NKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLECD 204 (361)
T ss_dssp --CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEECC
T ss_pred ccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCccCC
Confidence 4567889999999999865545555543 467788855543
No 34
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.77 E-value=2.1e-18 Score=167.25 Aligned_cols=174 Identities=17% Similarity=0.168 Sum_probs=130.1
Q ss_pred CEEEEEecCCCCcccCCccc--cCCCCCCEEEccCccccccCC----hhhcCCCCCCEEEccCCCCCCCCCcCCCCCccc
Q 012224 71 RVLKINISGSSLKGFLAPEL--GLLTYLQELILHGNNLIGIIP----KELGLLKRLKILDLGTNQLTGPIPPEIGNLTGL 144 (468)
Q Consensus 71 ~v~~L~L~~n~l~g~~p~~l--~~l~~L~~L~Ls~N~l~g~ip----~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L 144 (468)
++++|+|++|.+++..|..+ ..+++|++|+|++|.+++..| ..+..+++|++|+|++|++++..|..++.+++|
T Consensus 92 ~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L 171 (310)
T 4glp_A 92 RLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPAL 171 (310)
T ss_dssp CCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTC
T ss_pred ceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCC
Confidence 58899999999999998888 889999999999999988666 445678899999999999988888888899999
Q ss_pred ceeecccccCccc--CC--hhccCCCCCcEEeccCCCCCccCCCCCC--ccccccccccccCCCCccCc-----cCC---
Q 012224 145 VKINLQSNGLTGR--LP--AELGNLISLEELHLDRNRLQGAVPAGSN--SGYTANIHGMYASSANLTGL-----CHL--- 210 (468)
Q Consensus 145 ~~L~Ls~N~l~g~--~p--~~l~~l~~L~~L~ls~N~l~g~ip~~~~--~~~~~~l~~~~ls~n~l~~~-----~~l--- 210 (468)
++|+|++|++.+. ++ ..++.+++|++|++++|+++ .+|.... .....++..+++++|.+.+. ..+
T Consensus 172 ~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~ 250 (310)
T 4glp_A 172 TSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWS 250 (310)
T ss_dssp CEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCC
T ss_pred CEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCc
Confidence 9999999988753 22 23367788888888888886 2222100 00113567778888887664 223
Q ss_pred CCCCEEEcccCcCccCCCccc-cCCCCCcccCCcCCC
Q 012224 211 SQLKVADFSYNFFVGSIPKCL-EYLPSTSFQGNCLQN 246 (468)
Q Consensus 211 ~~L~~l~ls~N~l~g~ip~~~-~~l~~~~~~~n~~~~ 246 (468)
++|+.|++++|+++ .+|..+ .++..+++++|.+..
T Consensus 251 ~~L~~L~Ls~N~l~-~lp~~~~~~L~~L~Ls~N~l~~ 286 (310)
T 4glp_A 251 SALNSLNLSFAGLE-QVPKGLPAKLRVLDLSSNRLNR 286 (310)
T ss_dssp TTCCCEECCSSCCC-SCCSCCCSCCSCEECCSCCCCS
T ss_pred CcCCEEECCCCCCC-chhhhhcCCCCEEECCCCcCCC
Confidence 57888888888888 666654 467777788886665
No 35
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.77 E-value=3.4e-18 Score=175.82 Aligned_cols=172 Identities=19% Similarity=0.197 Sum_probs=140.0
Q ss_pred ccceeeCC---------CCCCEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCC
Q 012224 60 WTGIACSD---------ARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQL 130 (468)
Q Consensus 60 w~gv~C~~---------~~~~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l 130 (468)
|..|.|.. ...+++.|+|++|.+++..+..+..+++|++|+|++|.+++..|..|.++++|++|+|++|++
T Consensus 13 ~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l 92 (477)
T 2id5_A 13 DRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRL 92 (477)
T ss_dssp TTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred CCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcC
Confidence 66777763 124788999999999998889999999999999999999998899999999999999999999
Q ss_pred CCCCCcCCCCCcccceeecccccCcccCChhccCCCCCcEEeccCCCCCccCCCCCCccccccccccccCCCCccCc---
Q 012224 131 TGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL--- 207 (468)
Q Consensus 131 ~g~iP~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~~--- 207 (468)
++..+..|..+++|++|+|++|++++..|..+..+++|++|++++|.+++..|..+.. ..++..+++++|.++++
T Consensus 93 ~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~--l~~L~~L~l~~n~l~~~~~~ 170 (477)
T 2id5_A 93 KLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSG--LNSLEQLTLEKCNLTSIPTE 170 (477)
T ss_dssp CSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTT--CTTCCEEEEESCCCSSCCHH
T ss_pred CccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccC--CCCCCEEECCCCcCcccChh
Confidence 9655556889999999999999999888999999999999999999998766654322 24566777777777653
Q ss_pred --cCCCCCCEEEcccCcCccCCCccccC
Q 012224 208 --CHLSQLKVADFSYNFFVGSIPKCLEY 233 (468)
Q Consensus 208 --~~l~~L~~l~ls~N~l~g~ip~~~~~ 233 (468)
..+++|+.|++++|.+++..+..+..
T Consensus 171 ~l~~l~~L~~L~l~~n~i~~~~~~~~~~ 198 (477)
T 2id5_A 171 ALSHLHGLIVLRLRHLNINAIRDYSFKR 198 (477)
T ss_dssp HHTTCTTCCEEEEESCCCCEECTTCSCS
T ss_pred HhcccCCCcEEeCCCCcCcEeChhhccc
Confidence 45677777777777777665554443
No 36
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.77 E-value=3.8e-19 Score=194.05 Aligned_cols=172 Identities=19% Similarity=0.267 Sum_probs=148.6
Q ss_pred CCCEEEEEecCCCCcc-----------------cCCcccc--CCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCC
Q 012224 69 RDRVLKINISGSSLKG-----------------FLAPELG--LLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQ 129 (468)
Q Consensus 69 ~~~v~~L~L~~n~l~g-----------------~~p~~l~--~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~ 129 (468)
..+++.|+|++|.|+| .+|+.++ ++++|++|+|++|.+.|.+|..|+++++|+.|+|++|+
T Consensus 447 L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~ 526 (876)
T 4ecn_A 447 LTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNR 526 (876)
T ss_dssp CTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCT
T ss_pred CCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCC
Confidence 3589999999999999 4999988 99999999999999999999999999999999999998
Q ss_pred -CCC-CCCcCCCCCc-------ccceeecccccCcccCCh--hccCCCCCcEEeccCCCCCccCCCCCCccccccccccc
Q 012224 130 -LTG-PIPPEIGNLT-------GLVKINLQSNGLTGRLPA--ELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMY 198 (468)
Q Consensus 130 -l~g-~iP~~~~~l~-------~L~~L~Ls~N~l~g~~p~--~l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ 198 (468)
++| .+|..++.++ +|+.|+|++|+++ .+|. .++++++|+.|+|++|.++ .+|. .. ...++..++
T Consensus 527 ~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp~-~~--~L~~L~~L~ 601 (876)
T 4ecn_A 527 GISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLEA-FG--TNVKLTDLK 601 (876)
T ss_dssp TSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCCC-CC--TTSEESEEE
T ss_pred CcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cchh-hc--CCCcceEEE
Confidence 999 8998777776 9999999999999 9999 9999999999999999999 8882 22 235678889
Q ss_pred cCCCCccC----ccCCCC-CCEEEcccCcCccCCCccccC-----CCCCcccCCcCCC
Q 012224 199 ASSANLTG----LCHLSQ-LKVADFSYNFFVGSIPKCLEY-----LPSTSFQGNCLQN 246 (468)
Q Consensus 199 ls~n~l~~----~~~l~~-L~~l~ls~N~l~g~ip~~~~~-----l~~~~~~~n~~~~ 246 (468)
+++|++.. +..+++ |+.|++++|.++ .+|..+.. +..+.+++|.+.+
T Consensus 602 Ls~N~l~~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g 658 (876)
T 4ecn_A 602 LDYNQIEEIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGS 658 (876)
T ss_dssp CCSSCCSCCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTT
T ss_pred CcCCccccchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCC
Confidence 99998864 345677 999999999999 88877654 4456777886654
No 37
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.76 E-value=6.2e-18 Score=155.68 Aligned_cols=151 Identities=20% Similarity=0.245 Sum_probs=129.3
Q ss_pred EEEecCCCCcccCCccccCCCCCCEEEccCccccccCC-hhhcCCCCCCEEEccCCCCCCCCCcCCCCCcccceeecccc
Q 012224 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIP-KELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152 (468)
Q Consensus 74 ~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip-~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls~N 152 (468)
.+++++|.++. +|..+. ..+++|+|++|.+++..| ..|..+++|++|+|++|++++..|..|..+++|++|+|++|
T Consensus 15 ~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 15 TVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp EEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 79999999986 777664 457899999999998765 45899999999999999999877779999999999999999
Q ss_pred cCcccCChhccCCCCCcEEeccCCCCCccCCCCCCccccccccccccCCCCccCccCCCCCCEEEcccCcCccCCCcccc
Q 012224 153 GLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLE 232 (468)
Q Consensus 153 ~l~g~~p~~l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~~~~l~~L~~l~ls~N~l~g~ip~~~~ 232 (468)
++++..|..+..+++|++|+|++|.+++..|.. +..+++|+.|+|++|++++..|..+.
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~---------------------~~~l~~L~~L~L~~N~l~~~~~~~~~ 150 (220)
T 2v70_A 92 RLENVQHKMFKGLESLKTLMLRSNRITCVGNDS---------------------FIGLSSVRLLSLYDNQITTVAPGAFD 150 (220)
T ss_dssp CCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTS---------------------STTCTTCSEEECTTSCCCCBCTTTTT
T ss_pred ccCccCHhHhcCCcCCCEEECCCCcCCeECHhH---------------------cCCCccCCEEECCCCcCCEECHHHhc
Confidence 999888888999999999999999999766643 34577899999999999999898876
Q ss_pred CCC---CCcccCCcCCCCC
Q 012224 233 YLP---STSFQGNCLQNKD 248 (468)
Q Consensus 233 ~l~---~~~~~~n~~~~~~ 248 (468)
.++ .+.+++|.+...|
T Consensus 151 ~l~~L~~L~L~~N~l~c~c 169 (220)
T 2v70_A 151 TLHSLSTLNLLANPFNCNC 169 (220)
T ss_dssp TCTTCCEEECCSCCEECSG
T ss_pred CCCCCCEEEecCcCCcCCC
Confidence 554 4678888665543
No 38
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.76 E-value=6.1e-18 Score=165.42 Aligned_cols=171 Identities=19% Similarity=0.258 Sum_probs=124.1
Q ss_pred CCCccceeeCC---------CCCCEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccC
Q 012224 57 PCHWTGIACSD---------ARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGT 127 (468)
Q Consensus 57 ~c~w~gv~C~~---------~~~~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~ 127 (468)
.|.|+.+.|.. ....++.|+|++|.+++..+..++.+++|++|+|++|.+++..|..|.++++|++|+|++
T Consensus 30 ~c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 109 (330)
T 1xku_A 30 QCHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSK 109 (330)
T ss_dssp EEETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred cCCCeEEEecCCCccccCccCCCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCC
Confidence 46899999973 124789999999999998777899999999999999999988899999999999999999
Q ss_pred CCCCCCCCcCCCCCcccceeecccccCcccCChhccCCCCCcEEeccCCCCCc--cCCCCCCccccccccccccCCCCcc
Q 012224 128 NQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQG--AVPAGSNSGYTANIHGMYASSANLT 205 (468)
Q Consensus 128 N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g--~ip~~~~~~~~~~l~~~~ls~n~l~ 205 (468)
|+++ .+|..+. ++|++|++++|.+++..+..+..+++|+.|++++|.++. ..+.... ...++..+++++|.+.
T Consensus 110 n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~--~l~~L~~L~l~~n~l~ 184 (330)
T 1xku_A 110 NQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQ--GMKKLSYIRIADTNIT 184 (330)
T ss_dssp SCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGG--GCTTCCEEECCSSCCC
T ss_pred CcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhcc--CCCCcCEEECCCCccc
Confidence 9998 7787665 688888888888887666677788888888888887753 3332111 1123444555555544
Q ss_pred CccC--CCCCCEEEcccCcCccCCCcccc
Q 012224 206 GLCH--LSQLKVADFSYNFFVGSIPKCLE 232 (468)
Q Consensus 206 ~~~~--l~~L~~l~ls~N~l~g~ip~~~~ 232 (468)
.+.. .++|+.|++++|.+++..|..+.
T Consensus 185 ~l~~~~~~~L~~L~l~~n~l~~~~~~~~~ 213 (330)
T 1xku_A 185 TIPQGLPPSLTELHLDGNKITKVDAASLK 213 (330)
T ss_dssp SCCSSCCTTCSEEECTTSCCCEECTGGGT
T ss_pred cCCccccccCCEEECCCCcCCccCHHHhc
Confidence 3321 24455555555555554444443
No 39
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.76 E-value=1.8e-18 Score=183.23 Aligned_cols=174 Identities=21% Similarity=0.169 Sum_probs=143.5
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCCCcCCCCCcccceee
Q 012224 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (468)
Q Consensus 69 ~~~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ 148 (468)
..+++.|+|++|.+++..+..++.+++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..|+++++|++|+
T Consensus 31 ~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 110 (606)
T 3vq2_A 31 PSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLV 110 (606)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEE
T ss_pred CCCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEE
Confidence 35799999999999998888999999999999999999998899999999999999999999988899999999999999
Q ss_pred cccccCcccCChhccCCCCCcEEeccCCCCCc-cCCCCCCccccccccccccCCCCccCccC-----CCC----CCEEEc
Q 012224 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQG-AVPAGSNSGYTANIHGMYASSANLTGLCH-----LSQ----LKVADF 218 (468)
Q Consensus 149 Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g-~ip~~~~~~~~~~l~~~~ls~n~l~~~~~-----l~~----L~~l~l 218 (468)
|++|.+++..|..++++++|++|++++|.+++ .+|..... ..++..+++++|.++++.. +.+ +..+++
T Consensus 111 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~--l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l 188 (606)
T 3vq2_A 111 AVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSN--LTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDM 188 (606)
T ss_dssp CTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGT--CTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEEC
T ss_pred ccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhh--cCCCCEEEccCCcceecChhhhhhhhccccccceeec
Confidence 99999997777889999999999999999986 56764322 2456777888887765421 222 447888
Q ss_pred ccCcCccCCCcccc--CCCCCcccCCcC
Q 012224 219 SYNFFVGSIPKCLE--YLPSTSFQGNCL 244 (468)
Q Consensus 219 s~N~l~g~ip~~~~--~l~~~~~~~n~~ 244 (468)
++|.+++..+..+. ++..+++++|.+
T Consensus 189 ~~n~l~~~~~~~~~~~~L~~L~L~~n~~ 216 (606)
T 3vq2_A 189 SLNPIDFIQDQAFQGIKLHELTLRGNFN 216 (606)
T ss_dssp TTCCCCEECTTTTTTCEEEEEEEESCCS
T ss_pred cCCCcceeCcccccCceeeeeeccCCcc
Confidence 88888866555443 345566667643
No 40
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.76 E-value=1.1e-18 Score=172.44 Aligned_cols=187 Identities=17% Similarity=0.216 Sum_probs=146.2
Q ss_pred CCCCCccceeeCC-----------CCCCEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEE
Q 012224 55 ADPCHWTGIACSD-----------ARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKIL 123 (468)
Q Consensus 55 ~~~c~w~gv~C~~-----------~~~~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L 123 (468)
..+|.|.|+ |+. ...+++.|+|++|.+++..+..+..+++|++|+|++|.+++..|..|.++++|++|
T Consensus 27 ~~~C~~~~~-c~~~~~~l~~iP~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 105 (353)
T 2z80_A 27 SLSCDRNGI-CKGSSGSLNSIPSGLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHL 105 (353)
T ss_dssp CCEECTTSE-EECCSTTCSSCCTTCCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CCCCCCCeE-eeCCCCCcccccccccccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEE
Confidence 357888886 652 12479999999999998777789999999999999999998888899999999999
Q ss_pred EccCCCCCCCCCcCCCCCcccceeecccccCcccCCh--hccCCCCCcEEeccCCC-CCccCCCCCCccccccccccccC
Q 012224 124 DLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPA--ELGNLISLEELHLDRNR-LQGAVPAGSNSGYTANIHGMYAS 200 (468)
Q Consensus 124 ~Ls~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~~p~--~l~~l~~L~~L~ls~N~-l~g~ip~~~~~~~~~~l~~~~ls 200 (468)
||++|++++..+..+..+++|++|+|++|+++ .+|. .+..+++|++|++++|+ +++..|..... ..++..++++
T Consensus 106 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~--l~~L~~L~l~ 182 (353)
T 2z80_A 106 DLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAG--LTFLEELEID 182 (353)
T ss_dssp ECCSSCCSSCCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTT--CCEEEEEEEE
T ss_pred ECCCCcCCcCCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCcEEECCCCccccccCHHHccC--CCCCCEEECC
Confidence 99999999544444899999999999999999 5665 78899999999999995 55333333221 2456777888
Q ss_pred CCCccC-----ccCCCCCCEEEcccCcCccCCCcc----ccCCCCCcccCCcCCC
Q 012224 201 SANLTG-----LCHLSQLKVADFSYNFFVGSIPKC----LEYLPSTSFQGNCLQN 246 (468)
Q Consensus 201 ~n~l~~-----~~~l~~L~~l~ls~N~l~g~ip~~----~~~l~~~~~~~n~~~~ 246 (468)
+|.+.+ +..+++|+.|++++|.++ .+|.. +.++..+++++|.+..
T Consensus 183 ~n~l~~~~~~~l~~l~~L~~L~l~~n~l~-~~~~~~~~~~~~L~~L~L~~n~l~~ 236 (353)
T 2z80_A 183 ASDLQSYEPKSLKSIQNVSHLILHMKQHI-LLLEIFVDVTSSVECLELRDTDLDT 236 (353)
T ss_dssp ETTCCEECTTTTTTCSEEEEEEEECSCST-THHHHHHHHTTTEEEEEEESCBCTT
T ss_pred CCCcCccCHHHHhccccCCeecCCCCccc-cchhhhhhhcccccEEECCCCcccc
Confidence 887754 456778889999999885 44432 3456667788886655
No 41
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.76 E-value=1.5e-18 Score=184.11 Aligned_cols=135 Identities=20% Similarity=0.166 Sum_probs=110.8
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCCCcCCCCCcccceeec
Q 012224 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (468)
Q Consensus 70 ~~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~L 149 (468)
..+++|||++|.|++..+..|..+++|++|||++|.|++..|..|.+|++|++|+|++|+|++..|..|.++++|++|+|
T Consensus 52 ~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~L 131 (635)
T 4g8a_A 52 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 131 (635)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEEC
T ss_pred cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEEC
Confidence 47899999999999887888999999999999999999888888999999999999999999666667899999999999
Q ss_pred ccccCcccCChhccCCCCCcEEeccCCCCCcc-CCCCCCccccccccccccCCCCccC
Q 012224 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGA-VPAGSNSGYTANIHGMYASSANLTG 206 (468)
Q Consensus 150 s~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~-ip~~~~~~~~~~l~~~~ls~n~l~~ 206 (468)
++|++++..+..|+++++|++|++++|.+++. +|.... ....+..+++++|++++
T Consensus 132 s~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~--~l~~L~~L~L~~N~l~~ 187 (635)
T 4g8a_A 132 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFS--NLTNLEHLDLSSNKIQS 187 (635)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGG--GCTTCCEEECCSSCCCE
T ss_pred CCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhc--cchhhhhhcccCccccc
Confidence 99999976667799999999999999999753 333211 11234445555555443
No 42
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.76 E-value=3.8e-18 Score=187.64 Aligned_cols=85 Identities=21% Similarity=0.179 Sum_probs=48.7
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCCCcCCCCCcccceeecc
Q 012224 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (468)
Q Consensus 71 ~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls 150 (468)
+++.|+|++|.+++..|..+..+++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..|..+++|+.|+|+
T Consensus 291 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls 370 (844)
T 3j0a_A 291 DLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLR 370 (844)
T ss_dssp CCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEE
T ss_pred CCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECC
Confidence 45555555555555555555555555666666655555555555556666666666665554444455555556555555
Q ss_pred cccCc
Q 012224 151 SNGLT 155 (468)
Q Consensus 151 ~N~l~ 155 (468)
+|.++
T Consensus 371 ~N~l~ 375 (844)
T 3j0a_A 371 DNALT 375 (844)
T ss_dssp TCCSC
T ss_pred CCCCC
Confidence 55554
No 43
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.75 E-value=3.5e-18 Score=159.26 Aligned_cols=174 Identities=11% Similarity=0.102 Sum_probs=135.2
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCEEEccCcc-ccccCChhhcCCCCCCEEEccC-CCCCCCCCcCCCCCccccee
Q 012224 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNN-LIGIIPKELGLLKRLKILDLGT-NQLTGPIPPEIGNLTGLVKI 147 (468)
Q Consensus 70 ~~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~-l~g~ip~~~~~l~~L~~L~Ls~-N~l~g~iP~~~~~l~~L~~L 147 (468)
..++.|+|++|.+++..+..+..+++|++|+|++|. +++..+..|.++++|++|+|++ |++++..|..|..+++|++|
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 478999999999998777789999999999999997 8866666899999999999998 99996666778899999999
Q ss_pred ecccccCcccCChhccCCCCCc---EEeccCC-CCCccCCCCCCcccccccc-ccccCCCCccCcc----CCCCCCEEEc
Q 012224 148 NLQSNGLTGRLPAELGNLISLE---ELHLDRN-RLQGAVPAGSNSGYTANIH-GMYASSANLTGLC----HLSQLKVADF 218 (468)
Q Consensus 148 ~Ls~N~l~g~~p~~l~~l~~L~---~L~ls~N-~l~g~ip~~~~~~~~~~l~-~~~ls~n~l~~~~----~l~~L~~l~l 218 (468)
+|++|.+++ +|. +..+++|+ +|++++| .+++..+..+.. ..++. .+++++|.++.+. ..++|+.|++
T Consensus 111 ~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~--l~~L~~~L~l~~n~l~~i~~~~~~~~~L~~L~L 186 (239)
T 2xwt_C 111 GIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQG--LCNETLTLKLYNNGFTSVQGYAFNGTKLDAVYL 186 (239)
T ss_dssp EEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTT--TBSSEEEEECCSCCCCEECTTTTTTCEEEEEEC
T ss_pred eCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccc--hhcceeEEEcCCCCCcccCHhhcCCCCCCEEEc
Confidence 999999985 776 88888888 9999999 887443332221 23566 7888888876532 2367889999
Q ss_pred ccCc-CccCCCccccC----CCCCcccCCcCCCC
Q 012224 219 SYNF-FVGSIPKCLEY----LPSTSFQGNCLQNK 247 (468)
Q Consensus 219 s~N~-l~g~ip~~~~~----l~~~~~~~n~~~~~ 247 (468)
++|. +++..+..+.. +..+++++|.+...
T Consensus 187 ~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l 220 (239)
T 2xwt_C 187 NKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTAL 220 (239)
T ss_dssp TTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCC
T ss_pred CCCCCcccCCHHHhhccccCCcEEECCCCccccC
Confidence 9994 88655555544 44567778866553
No 44
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.75 E-value=8e-18 Score=151.52 Aligned_cols=131 Identities=26% Similarity=0.340 Sum_probs=109.4
Q ss_pred EEEecCCCCcccCCccccCCCCCCEEEccCccccccCCh-hhcCCCCCCEEEccCCCCCCCCCcCCCCCcccceeecccc
Q 012224 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPK-ELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152 (468)
Q Consensus 74 ~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~-~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls~N 152 (468)
.+++++|+|+ .+|..+.. +|++|+|++|.+++..|. .|..+++|++|+|++|+|++..|..|..+++|++|+|++|
T Consensus 12 ~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 88 (192)
T 1w8a_A 12 TVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGEN 88 (192)
T ss_dssp EEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSC
T ss_pred EEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCC
Confidence 4566677774 57776644 899999999999876664 4889999999999999999888999999999999999999
Q ss_pred cCcccCChhccCCCCCcEEeccCCCCCccCCCCCCccccccccccccCCCCccCccCCCCCCEEEcccCcCccCCC
Q 012224 153 GLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIP 228 (468)
Q Consensus 153 ~l~g~~p~~l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~~~~l~~L~~l~ls~N~l~g~ip 228 (468)
++++..|..+..+++|++|+|++|++++.+|.. +..+++|+.|++++|.+++..+
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~---------------------~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 89 KIKEISNKMFLGLHQLKTLNLYDNQISCVMPGS---------------------FEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCCEECSSSSTTCTTCCEEECCSSCCCEECTTS---------------------STTCTTCCEEECTTCCBCCSGG
T ss_pred cCCccCHHHhcCCCCCCEEECCCCcCCeeCHHH---------------------hhcCCCCCEEEeCCCCccCcCc
Confidence 999888888999999999999999999877753 3346778999999999988765
No 45
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.75 E-value=6.8e-18 Score=185.61 Aligned_cols=189 Identities=21% Similarity=0.218 Sum_probs=159.1
Q ss_pred CCCccceeeCCCCCCEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccC-ChhhcCCCCCCEEEccCCCCCCCCC
Q 012224 57 PCHWTGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGII-PKELGLLKRLKILDLGTNQLTGPIP 135 (468)
Q Consensus 57 ~c~w~gv~C~~~~~~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~i-p~~~~~l~~L~~L~Ls~N~l~g~iP 135 (468)
.|+|+.|.+ ...+++.|||++|.+++..|..+..+++|++|+|++|.+.+.+ |..|.++++|++|+|++|++++..|
T Consensus 13 ~~~L~~vP~--lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p 90 (844)
T 3j0a_A 13 FCNLTQVPQ--VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHP 90 (844)
T ss_dssp CCCSSCCCS--SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECT
T ss_pred CCCCCCCCC--CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCH
Confidence 456777777 3679999999999999999999999999999999999888777 7889999999999999999999999
Q ss_pred cCCCCCcccceeecccccCcccCChh--ccCCCCCcEEeccCCCCCccCCCCCCccccccccccccCCCCccCcc-----
Q 012224 136 PEIGNLTGLVKINLQSNGLTGRLPAE--LGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLC----- 208 (468)
Q Consensus 136 ~~~~~l~~L~~L~Ls~N~l~g~~p~~--l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~~~----- 208 (468)
..|.++++|++|+|++|.+++.+|.. +.++++|++|+|++|.+++..|..... ...++..+++++|.+.+..
T Consensus 91 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~-~L~~L~~L~Ls~N~i~~~~~~~l~ 169 (844)
T 3j0a_A 91 DAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFG-KLNSLKSIDFSSNQIFLVCEHELE 169 (844)
T ss_dssp TSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGG-TCSSCCEEEEESSCCCCCCSGGGH
T ss_pred hHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHh-hCCCCCEEECCCCcCCeeCHHHcc
Confidence 99999999999999999999888876 999999999999999999766542211 2246778899999886643
Q ss_pred CC--CCCCEEEcccCcCccCCCccccC---------CCCCcccCCcCCCCC
Q 012224 209 HL--SQLKVADFSYNFFVGSIPKCLEY---------LPSTSFQGNCLQNKD 248 (468)
Q Consensus 209 ~l--~~L~~l~ls~N~l~g~ip~~~~~---------l~~~~~~~n~~~~~~ 248 (468)
.+ ++|+.|++++|.+++.+|..+.. +..+++++|.+....
T Consensus 170 ~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~ 220 (844)
T 3j0a_A 170 PLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDI 220 (844)
T ss_dssp HHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTT
T ss_pred cccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhH
Confidence 23 78999999999999988876654 455677788665443
No 46
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.75 E-value=1.2e-17 Score=156.86 Aligned_cols=156 Identities=25% Similarity=0.237 Sum_probs=136.8
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCCCcCCCCCcccceeec
Q 012224 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (468)
Q Consensus 70 ~~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~L 149 (468)
..++.|+|++|.+++..+..++.+++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..+..+++|++|+|
T Consensus 35 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 114 (251)
T 3m19_A 35 ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYL 114 (251)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEc
Confidence 47899999999999988889999999999999999999988888999999999999999999777778899999999999
Q ss_pred ccccCcccCChhccCCCCCcEEeccCCCCCccCCCCCCccccccccccccCCCCccCc-----cCCCCCCEEEcccCcCc
Q 012224 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL-----CHLSQLKVADFSYNFFV 224 (468)
Q Consensus 150 s~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~~-----~~l~~L~~l~ls~N~l~ 224 (468)
++|++++..+..+..+++|++|+|++|++++..+..... ..++..+++++|++.++ ..+++|+.|++++|+++
T Consensus 115 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~--l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 192 (251)
T 3m19_A 115 GGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDK--LTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFD 192 (251)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTT--CTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBC
T ss_pred CCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCc--CcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCcee
Confidence 999999766667899999999999999999554433221 24678899999998764 45789999999999999
Q ss_pred cCC
Q 012224 225 GSI 227 (468)
Q Consensus 225 g~i 227 (468)
+..
T Consensus 193 c~~ 195 (251)
T 3m19_A 193 CSR 195 (251)
T ss_dssp TTS
T ss_pred CCc
Confidence 873
No 47
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.75 E-value=2e-19 Score=174.70 Aligned_cols=174 Identities=17% Similarity=0.128 Sum_probs=134.6
Q ss_pred EEEEEecCCCC-cccCCcccc-------CCCCCCEEEccCccccccCChhh--cCCCCCCEEEccCCCCCCCCCcCCCCC
Q 012224 72 VLKINISGSSL-KGFLAPELG-------LLTYLQELILHGNNLIGIIPKEL--GLLKRLKILDLGTNQLTGPIPPEIGNL 141 (468)
Q Consensus 72 v~~L~L~~n~l-~g~~p~~l~-------~l~~L~~L~Ls~N~l~g~ip~~~--~~l~~L~~L~Ls~N~l~g~iP~~~~~l 141 (468)
++.|+|++|.+ .+.+|..+. .+++|++|+|++|.+++.+|..+ ..+++|++|+|++|++++. |..++.+
T Consensus 65 L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l 143 (312)
T 1wwl_A 65 IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAEL 143 (312)
T ss_dssp HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHH
T ss_pred HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHH
Confidence 34455566655 344555554 68999999999999999999876 8999999999999999976 8877777
Q ss_pred -----cccceeecccccCcccCChhccCCCCCcEEeccCCCCCccC--CCCCCccccccccccccCCCCccCc-------
Q 012224 142 -----TGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAV--PAGSNSGYTANIHGMYASSANLTGL------- 207 (468)
Q Consensus 142 -----~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~i--p~~~~~~~~~~l~~~~ls~n~l~~~------- 207 (468)
++|++|+|++|++++..|..++.+++|++|++++|++.|.+ |.........++..+++++|.++++
T Consensus 144 ~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 223 (312)
T 1wwl_A 144 QQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSAL 223 (312)
T ss_dssp HTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHH
T ss_pred HHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHH
Confidence 89999999999999888889999999999999999988763 2222111235678889999998742
Q ss_pred -cCCCCCCEEEcccCcCccCCCc-cc---cCCCCCcccCCcCCC
Q 012224 208 -CHLSQLKVADFSYNFFVGSIPK-CL---EYLPSTSFQGNCLQN 246 (468)
Q Consensus 208 -~~l~~L~~l~ls~N~l~g~ip~-~~---~~l~~~~~~~n~~~~ 246 (468)
..+++|+.||+++|++++.+|. .+ .++..+++++|.+..
T Consensus 224 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~ 267 (312)
T 1wwl_A 224 AAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLKQ 267 (312)
T ss_dssp HHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCSS
T ss_pred HhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccCh
Confidence 2568899999999999987752 22 466777888887663
No 48
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.75 E-value=5.5e-18 Score=172.96 Aligned_cols=176 Identities=22% Similarity=0.303 Sum_probs=129.9
Q ss_pred CCEEEEEecCCCCcccCCcc--ccCCCCCCEEEccCccccccCChh-hcCCCCCCEEEccCCCCCCCCCcCCCCC-----
Q 012224 70 DRVLKINISGSSLKGFLAPE--LGLLTYLQELILHGNNLIGIIPKE-LGLLKRLKILDLGTNQLTGPIPPEIGNL----- 141 (468)
Q Consensus 70 ~~v~~L~L~~n~l~g~~p~~--l~~l~~L~~L~Ls~N~l~g~ip~~-~~~l~~L~~L~Ls~N~l~g~iP~~~~~l----- 141 (468)
.+++.|+|++|.+++.++.. ++.+++|++|+|++|.+++..|.. +.++++|++|+|++|++++..|..+..+
T Consensus 103 ~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L 182 (455)
T 3v47_A 103 ANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHF 182 (455)
T ss_dssp TTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEE
T ss_pred ccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhccccccc
Confidence 47888888888888766555 788888888888888888777765 7788888888888888887766554432
Q ss_pred --------------------------------------------------------------------------------
Q 012224 142 -------------------------------------------------------------------------------- 141 (468)
Q Consensus 142 -------------------------------------------------------------------------------- 141 (468)
T Consensus 183 ~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~ 262 (455)
T 3v47_A 183 TLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFK 262 (455)
T ss_dssp EEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSC
T ss_pred cccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhc
Confidence
Q ss_pred ------------cccceeecccccCcccCChhccCCCCCcEEeccCCCCCccCCCCCCccccccccccccCCCCccC---
Q 012224 142 ------------TGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG--- 206 (468)
Q Consensus 142 ------------~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~--- 206 (468)
++|+.|+|++|.+++.+|..+..+++|++|++++|.+++..|..... ..++..+++++|.+.+
T Consensus 263 ~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~--l~~L~~L~Ls~N~l~~~~~ 340 (455)
T 3v47_A 263 DPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWG--LTHLLKLNLSQNFLGSIDS 340 (455)
T ss_dssp CCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTT--CTTCCEEECCSSCCCEECG
T ss_pred cCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcC--cccCCEEECCCCccCCcCh
Confidence 24555666666666668888899999999999999998776654322 2457777888888764
Q ss_pred --ccCCCCCCEEEcccCcCccCCCccccCCC---CCcccCCcCCCC
Q 012224 207 --LCHLSQLKVADFSYNFFVGSIPKCLEYLP---STSFQGNCLQNK 247 (468)
Q Consensus 207 --~~~l~~L~~l~ls~N~l~g~ip~~~~~l~---~~~~~~n~~~~~ 247 (468)
+..+++|+.|++++|++++..|..+..++ .+++++|.+...
T Consensus 341 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 386 (455)
T 3v47_A 341 RMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSV 386 (455)
T ss_dssp GGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCC
T ss_pred hHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccC
Confidence 34577888888888888887787665544 456777766653
No 49
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.75 E-value=3.7e-18 Score=178.21 Aligned_cols=118 Identities=26% Similarity=0.413 Sum_probs=85.1
Q ss_pred CCCCCCCCCCC-----Cccce-eeCCCCCCEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCC
Q 012224 48 SNWNALDADPC-----HWTGI-ACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLK 121 (468)
Q Consensus 48 ~~w~~~~~~~c-----~w~gv-~C~~~~~~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~ 121 (468)
.+|.. +.++| .|.|+ .|. ..+++.|+|++|+|++ +|..+. ++|++|+|++|.|+ .+| ..+++|+
T Consensus 34 ~~W~~-~~~~~~~~~~~~~~l~~C~--~~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~ 103 (571)
T 3cvr_A 34 DKWEK-QALPGENRNEAVSLLKECL--INQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLE 103 (571)
T ss_dssp HHHHT-TCCTTCCHHHHHHHHHHHH--HTTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCC
T ss_pred HHHhc-cCCccccccchhhhccccc--cCCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCC
Confidence 45643 34678 69999 786 4578899999999987 777663 77888888888887 677 4567888
Q ss_pred EEEccCCCCCCCCCcCCCCCcccceeecccccCcccCChhccCCCCCcEEeccCCCCCccCCC
Q 012224 122 ILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPA 184 (468)
Q Consensus 122 ~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~ip~ 184 (468)
+|+|++|+|++ +|. +.. +|++|+|++|+|++ +|. .+++|+.|++++|.+++ +|.
T Consensus 104 ~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~ 157 (571)
T 3cvr_A 104 YLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE 157 (571)
T ss_dssp EEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC
T ss_pred EEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC
Confidence 88888888876 776 554 77777777777775 665 45666666666666664 554
No 50
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.75 E-value=6.3e-18 Score=169.22 Aligned_cols=151 Identities=21% Similarity=0.248 Sum_probs=85.8
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCCCcCCCCCcccceeecc
Q 012224 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (468)
Q Consensus 71 ~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls 150 (468)
+++.|+++++.++...+..+..+++|++|+|++|.+++..|..|..+++|++|+|++|++++..|..++.+++|++|+|+
T Consensus 46 ~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 125 (390)
T 3o6n_A 46 NQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLE 125 (390)
T ss_dssp CCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECC
Confidence 45666666666655333335666666666666666666555566666666666666666666555566666666666666
Q ss_pred cccCcccCChh-ccCCCCCcEEeccCCCCCccCCCCCCccccccccccccCCCCccCc--cCCCCCCEEEcccCcCc
Q 012224 151 SNGLTGRLPAE-LGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL--CHLSQLKVADFSYNFFV 224 (468)
Q Consensus 151 ~N~l~g~~p~~-l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~~--~~l~~L~~l~ls~N~l~ 224 (468)
+|.++ .+|.. +..+++|++|++++|.+++..|..... ..++..+++++|.++++ ..+++|+.+++++|.++
T Consensus 126 ~n~l~-~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~--l~~L~~L~l~~n~l~~~~~~~l~~L~~L~l~~n~l~ 199 (390)
T 3o6n_A 126 RNDLS-SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQA--TTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLS 199 (390)
T ss_dssp SSCCC-CCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSS--CTTCCEEECCSSCCSBCCGGGCTTCSEEECCSSCCS
T ss_pred CCccC-cCCHHHhcCCCCCcEEECCCCccCccChhhccC--CCCCCEEECCCCcCCccccccccccceeeccccccc
Confidence 66666 34433 466666666666666666444432211 12344455555554432 23344444444444443
No 51
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.75 E-value=1.2e-17 Score=169.98 Aligned_cols=157 Identities=17% Similarity=0.145 Sum_probs=102.2
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCCCcCCCCCcccceeec
Q 012224 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (468)
Q Consensus 70 ~~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~L 149 (468)
.+++.|+|++|.+++..+..+..+++|++|+|++|.+++..+..|..+++|++|+|++|++++..+..|..+++|+.|+|
T Consensus 88 ~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l 167 (440)
T 3zyj_A 88 RHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDL 167 (440)
T ss_dssp SSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCC
Confidence 47888999999888877788888888999999988888666667888888888888888888555556777777777777
Q ss_pred ccccCcccCCh-hccCCCCCcEEeccCCCCCccCCCCCCccccccccccccCCCCccC-----ccCCCCCCEEEcccCcC
Q 012224 150 QSNGLTGRLPA-ELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSYNFF 223 (468)
Q Consensus 150 s~N~l~g~~p~-~l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~-----~~~l~~L~~l~ls~N~l 223 (468)
++|+..+.+|. .+..+++|++|++++|+++ .+|.... ..++..+++++|.+++ +..+++|+.|++++|++
T Consensus 168 ~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~---l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l 243 (440)
T 3zyj_A 168 GELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIPNLTP---LIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQI 243 (440)
T ss_dssp CCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCCCCTT---CSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred CCCCCcceeCcchhhcccccCeecCCCCcCc-cccccCC---CcccCEEECCCCccCccChhhhccCccCCEEECCCCce
Confidence 77443334443 5666666666666666666 4443211 1234445555554433 22334444444444444
Q ss_pred ccCCCcc
Q 012224 224 VGSIPKC 230 (468)
Q Consensus 224 ~g~ip~~ 230 (468)
++..|..
T Consensus 244 ~~~~~~~ 250 (440)
T 3zyj_A 244 QVIERNA 250 (440)
T ss_dssp CEECTTS
T ss_pred eEEChhh
Confidence 4444433
No 52
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.75 E-value=4.6e-18 Score=178.57 Aligned_cols=153 Identities=19% Similarity=0.175 Sum_probs=103.6
Q ss_pred cCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCC--CCCcCCCCCcccceeecccccCcccCChh-ccCCCC
Q 012224 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTG--PIPPEIGNLTGLVKINLQSNGLTGRLPAE-LGNLIS 167 (468)
Q Consensus 91 ~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g--~iP~~~~~l~~L~~L~Ls~N~l~g~~p~~-l~~l~~ 167 (468)
..+++|++|+|++|.+++.+|..+.++++|++|+|++|++++ .+|..+..+++|+.|+|++|++++.+|.. +..+++
T Consensus 350 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~ 429 (562)
T 3a79_B 350 PSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAES 429 (562)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTT
T ss_pred cCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCccc
Confidence 566777777777777777777777777777777777777775 33456777777777777777777656653 666777
Q ss_pred CcEEeccCCCCCccCCCCCCccccccccccccCCCCccCc----cCCCCCCEEEcccCcCccCCCcc-ccC---CCCCcc
Q 012224 168 LEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL----CHLSQLKVADFSYNFFVGSIPKC-LEY---LPSTSF 239 (468)
Q Consensus 168 L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~~----~~l~~L~~l~ls~N~l~g~ip~~-~~~---l~~~~~ 239 (468)
|++|++++|.+++.+|.... ..+..+++++|+++.+ ..+++|+.|++++|+++ .+|.. +.. +..+++
T Consensus 430 L~~L~l~~n~l~~~~~~~l~----~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l 504 (562)
T 3a79_B 430 ILVLNLSSNMLTGSVFRCLP----PKVKVLDLHNNRIMSIPKDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYIWL 504 (562)
T ss_dssp CCEEECCSSCCCGGGGSSCC----TTCSEEECCSSCCCCCCTTTTSSCCCSEEECCSSCCC-CCCTTSTTTCTTCCCEEC
T ss_pred CCEEECCCCCCCcchhhhhc----CcCCEEECCCCcCcccChhhcCCCCCCEEECCCCCCC-CCCHHHHhcCCCCCEEEe
Confidence 77777777777776665432 3566677777776643 34677888888888887 45554 443 444566
Q ss_pred cCCcCCCCC
Q 012224 240 QGNCLQNKD 248 (468)
Q Consensus 240 ~~n~~~~~~ 248 (468)
++|.+.+.|
T Consensus 505 ~~N~~~c~c 513 (562)
T 3a79_B 505 HDNPWDCTC 513 (562)
T ss_dssp CSCCBCCCH
T ss_pred cCCCcCCCc
Confidence 777555433
No 53
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.75 E-value=6.7e-18 Score=157.31 Aligned_cols=169 Identities=20% Similarity=0.179 Sum_probs=136.1
Q ss_pred CCCEEEEEecCCC-CcccCCccccCCCCCCEEEccC-ccccccCChhhcCCCCCCEEEccCCCCCCCCCcCCCCCcccc-
Q 012224 69 RDRVLKINISGSS-LKGFLAPELGLLTYLQELILHG-NNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLV- 145 (468)
Q Consensus 69 ~~~v~~L~L~~n~-l~g~~p~~l~~l~~L~~L~Ls~-N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~- 145 (468)
..+++.|+|++|. +++..+..+..+++|++|+|++ |.+++..|..|.++++|++|++++|++++ +|. +..+++|+
T Consensus 54 l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~ 131 (239)
T 2xwt_C 54 LPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDI 131 (239)
T ss_dssp CTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCS
T ss_pred CCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-ccccccccc
Confidence 3578999999997 7776666889999999999998 99997777788999999999999999985 776 88888888
Q ss_pred --eeecccc-cCcccCChhccCCCCCc-EEeccCCCCCccCCCCCCccccccccccccCCCC-ccC-----ccCC-CCCC
Q 012224 146 --KINLQSN-GLTGRLPAELGNLISLE-ELHLDRNRLQGAVPAGSNSGYTANIHGMYASSAN-LTG-----LCHL-SQLK 214 (468)
Q Consensus 146 --~L~Ls~N-~l~g~~p~~l~~l~~L~-~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~-l~~-----~~~l-~~L~ 214 (468)
+|++++| ++++..+..+..+++|+ .|++++|.++ .+|...... .++..+++++|+ +.. +..+ ++|+
T Consensus 132 L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~--~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~ 208 (239)
T 2xwt_C 132 FFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNG--TKLDAVYLNKNKYLTVIDKDAFGGVYSGPS 208 (239)
T ss_dssp EEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTT--CEEEEEECTTCTTCCEECTTTTTTCSBCCS
T ss_pred ccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCC--CCCCEEEcCCCCCcccCCHHHhhccccCCc
Confidence 9999999 88866666788999999 9999999998 777654432 467788899984 754 3456 7899
Q ss_pred EEEcccCcCccCCCccccCCCCCcccCC
Q 012224 215 VADFSYNFFVGSIPKCLEYLPSTSFQGN 242 (468)
Q Consensus 215 ~l~ls~N~l~g~ip~~~~~l~~~~~~~n 242 (468)
.||+++|++++..+..+.+++.+.+.++
T Consensus 209 ~L~l~~N~l~~l~~~~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 209 LLDVSQTSVTALPSKGLEHLKELIARNT 236 (239)
T ss_dssp EEECTTCCCCCCCCTTCTTCSEEECTTC
T ss_pred EEECCCCccccCChhHhccCceeeccCc
Confidence 9999999998554455667766665543
No 54
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.74 E-value=5.5e-18 Score=179.43 Aligned_cols=173 Identities=17% Similarity=0.102 Sum_probs=96.3
Q ss_pred CCEEEEEecCCCCccc--CCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCCC-cCCCCCcccce
Q 012224 70 DRVLKINISGSSLKGF--LAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIP-PEIGNLTGLVK 146 (468)
Q Consensus 70 ~~v~~L~L~~n~l~g~--~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP-~~~~~l~~L~~ 146 (468)
.+++.|+|++|.+++. +|..+..+++|++|+|++|.+++ +|..+..+++|+.|++++|++++..| ..+..+++|++
T Consensus 350 ~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~ 428 (606)
T 3vq2_A 350 PSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLY 428 (606)
T ss_dssp TTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCE
T ss_pred CCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCE
Confidence 4566777777776654 35556666666666666666553 44555666666666666666665555 45556666666
Q ss_pred eecccccCcccCChhccCCCCCcEEeccCCCCCcc-CCCCCCccccccccccccCCCCccC-----ccCCCCCCEEEccc
Q 012224 147 INLQSNGLTGRLPAELGNLISLEELHLDRNRLQGA-VPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSY 220 (468)
Q Consensus 147 L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~-ip~~~~~~~~~~l~~~~ls~n~l~~-----~~~l~~L~~l~ls~ 220 (468)
|++++|.+++.+|..+..+++|++|++++|.+++. +|..... ..++..+++++|.+++ +..+++|+.|++++
T Consensus 429 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~--l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~ 506 (606)
T 3vq2_A 429 LDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFAN--TTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSH 506 (606)
T ss_dssp EECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTT--CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred EECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhcc--CCCCCEEECCCCcCCccChhhhcccccCCEEECCC
Confidence 66666666655555566666666666666666553 3332211 1344555555555543 23445566666666
Q ss_pred CcCccCCCccccCC---CCCcccCCcCC
Q 012224 221 NFFVGSIPKCLEYL---PSTSFQGNCLQ 245 (468)
Q Consensus 221 N~l~g~ip~~~~~l---~~~~~~~n~~~ 245 (468)
|++++.+|..+..+ ..+++++|.+.
T Consensus 507 N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 534 (606)
T 3vq2_A 507 NNLLFLDSSHYNQLYSLSTLDCSFNRIE 534 (606)
T ss_dssp SCCSCEEGGGTTTCTTCCEEECTTSCCC
T ss_pred CcCCCcCHHHccCCCcCCEEECCCCcCc
Confidence 66655555554433 23345555443
No 55
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.74 E-value=6.5e-18 Score=178.87 Aligned_cols=160 Identities=19% Similarity=0.163 Sum_probs=142.6
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCCCcCCCCCcccceeec
Q 012224 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (468)
Q Consensus 70 ~~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~L 149 (468)
..++.|+|++|.+++..|..++.+++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..|+.+++|++|+|
T Consensus 33 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 112 (606)
T 3t6q_A 33 NSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFF 112 (606)
T ss_dssp TTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEEC
T ss_pred CcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeec
Confidence 57999999999999988999999999999999999999999999999999999999999999989999999999999999
Q ss_pred ccccCcccCChhccCCCCCcEEeccCCCCCcc-CCCCCCccccccccccccCCCCccCc-----cCCCCCC--EEEcccC
Q 012224 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGA-VPAGSNSGYTANIHGMYASSANLTGL-----CHLSQLK--VADFSYN 221 (468)
Q Consensus 150 s~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~-ip~~~~~~~~~~l~~~~ls~n~l~~~-----~~l~~L~--~l~ls~N 221 (468)
++|++++..|..++++++|++|++++|.+++. +|.... ..++..+++++|.+.++ ..+++|+ .+++++|
T Consensus 113 ~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~---l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n 189 (606)
T 3t6q_A 113 IQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFP---TEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGN 189 (606)
T ss_dssp TTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCC---CTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTC
T ss_pred cccCcccCCcchhccCCcccEEECCCCcccccCcccccC---CcccCEEEcccCcccccChhhhhhhcccceeEEecCCC
Confidence 99999977688899999999999999999973 344332 35788899999998763 4678888 8999999
Q ss_pred cCccCCCcccc
Q 012224 222 FFVGSIPKCLE 232 (468)
Q Consensus 222 ~l~g~ip~~~~ 232 (468)
.+++..|..+.
T Consensus 190 ~l~~~~~~~~~ 200 (606)
T 3t6q_A 190 DIAGIEPGAFD 200 (606)
T ss_dssp CCCEECTTTTT
T ss_pred ccCccChhHhh
Confidence 99988776553
No 56
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.74 E-value=4.3e-18 Score=153.29 Aligned_cols=127 Identities=24% Similarity=0.323 Sum_probs=115.4
Q ss_pred CCCccceeeCCC---------CCCEEEEEecCCCCcccCCc-cccCCCCCCEEEccCccccccCChhhcCCCCCCEEEcc
Q 012224 57 PCHWTGIACSDA---------RDRVLKINISGSSLKGFLAP-ELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLG 126 (468)
Q Consensus 57 ~c~w~gv~C~~~---------~~~v~~L~L~~n~l~g~~p~-~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls 126 (468)
.|.|+.+.|... ..+++.|+|++|.+++..+. .++.+++|++|+|++|.+++..|..|.++++|++|+|+
T Consensus 7 ~C~~~~l~~s~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 86 (192)
T 1w8a_A 7 HCEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLG 86 (192)
T ss_dssp EEETTEEECTTSCCSSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred EECCCEEEcCCCCcCcCccCCCCCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECC
Confidence 367888888731 23789999999999987665 48999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcCCCCCcccceeecccccCcccCChhccCCCCCcEEeccCCCCCccCC
Q 012224 127 TNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVP 183 (468)
Q Consensus 127 ~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~ip 183 (468)
+|+|++..|..|..+++|++|+|++|++++..|..+..+++|++|+|++|.+++..+
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 87 ENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp SCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 999998888889999999999999999999999999999999999999999997765
No 57
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.74 E-value=1.8e-17 Score=152.59 Aligned_cols=150 Identities=21% Similarity=0.244 Sum_probs=127.1
Q ss_pred EEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCCCcCCCCCcccceeecccc
Q 012224 73 LKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152 (468)
Q Consensus 73 ~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls~N 152 (468)
..+++++++++. +|..+. ++|++|+|++|.+++..|..|..+++|++|+|++|++++..|..|..+++|++|+|++|
T Consensus 14 ~~v~c~~~~l~~-iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLTE-IPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCSS-CCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcCc-CCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 368999999986 676664 78999999999999888888999999999999999999888999999999999999999
Q ss_pred cCcccCChhccCCCCCcEEeccCCCCCccCCCCCCccccccccccccCCCCccCccCCCCCCEEEcccCcCccCCCcccc
Q 012224 153 GLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLE 232 (468)
Q Consensus 153 ~l~g~~p~~l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~~~~l~~L~~l~ls~N~l~g~ip~~~~ 232 (468)
++++..+..+..+++|++|+|++|.+++..|.. +..+++|+.|+|++|++++..+..+.
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~---------------------~~~l~~L~~L~L~~N~l~~~~~~~~~ 149 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDA---------------------FQDLHNLNLLSLYDNKLQTIAKGTFS 149 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTT---------------------TTTCTTCCEEECCSSCCSCCCTTTTT
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHH---------------------cCCCCCCCEEECCCCcCCEECHHHHh
Confidence 999554555789999999999999999665542 44577899999999999988877666
Q ss_pred CC---CCCcccCCcCCC
Q 012224 233 YL---PSTSFQGNCLQN 246 (468)
Q Consensus 233 ~l---~~~~~~~n~~~~ 246 (468)
.+ ..+.+++|.+..
T Consensus 150 ~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 150 PLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp TCTTCCEEECCSSCEEC
T ss_pred CCCCCCEEEeCCCCcCC
Confidence 54 456788885543
No 58
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.74 E-value=1.7e-17 Score=169.48 Aligned_cols=159 Identities=16% Similarity=0.146 Sum_probs=109.2
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCCCcCCCCCcccceee
Q 012224 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (468)
Q Consensus 69 ~~~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ 148 (468)
..+++.|+|++|.+++..+..+..+++|++|+|++|.+++..+..|.++++|++|+|++|++++..+..|..+++|+.|+
T Consensus 98 l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 177 (452)
T 3zyi_A 98 LHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLD 177 (452)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEe
Confidence 35789999999999998888999999999999999999977777789999999999999999855555677777787777
Q ss_pred cccccCcccCCh-hccCCCCCcEEeccCCCCCccCCCCCCccccccccccccCCCCccC-----ccCCCCCCEEEcccCc
Q 012224 149 LQSNGLTGRLPA-ELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSYNF 222 (468)
Q Consensus 149 Ls~N~l~g~~p~-~l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~-----~~~l~~L~~l~ls~N~ 222 (468)
|++|+..+.+|. .+..+++|++|++++|++++ +|.... ..++..+++++|.+++ +..+++|+.|++++|+
T Consensus 178 l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~---l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~ 253 (452)
T 3zyi_A 178 LGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD-MPNLTP---LVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQ 253 (452)
T ss_dssp CCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS-CCCCTT---CTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSC
T ss_pred CCCCCCccccChhhccCCCCCCEEECCCCcccc-cccccc---cccccEEECcCCcCcccCcccccCccCCCEEEeCCCc
Confidence 777444434443 46677777777777777763 343211 1234445555555433 2334444444444444
Q ss_pred CccCCCccc
Q 012224 223 FVGSIPKCL 231 (468)
Q Consensus 223 l~g~ip~~~ 231 (468)
+++..|..+
T Consensus 254 l~~~~~~~~ 262 (452)
T 3zyi_A 254 VSLIERNAF 262 (452)
T ss_dssp CCEECTTTT
T ss_pred CceECHHHh
Confidence 444444333
No 59
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.74 E-value=1.4e-17 Score=178.81 Aligned_cols=162 Identities=21% Similarity=0.225 Sum_probs=141.9
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCCCcCCCCCcccceeec
Q 012224 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (468)
Q Consensus 70 ~~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~L 149 (468)
.+++.|+|++|.+++..+..++.+++|++|+|++|.+++..|..|.++++|++|+|++|++++..+..|+.+++|++|+|
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 104 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHL 104 (680)
T ss_dssp TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEEC
Confidence 57999999999999987788999999999999999999999999999999999999999999544457999999999999
Q ss_pred ccccCcccCChhccCCCCCcEEeccCCCCCccCCCCCCccccccccccccCCCCccCcc-------CCCCCCEEEcccCc
Q 012224 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLC-------HLSQLKVADFSYNF 222 (468)
Q Consensus 150 s~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~~~-------~l~~L~~l~ls~N~ 222 (468)
++|++++..|..++++++|++|++++|.+++..|..... ..++..+++++|.++++. .+++|+.|++++|.
T Consensus 105 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~--l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~ 182 (680)
T 1ziw_A 105 MSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQ--LENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQ 182 (680)
T ss_dssp CSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSC--CTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCC
T ss_pred CCCccCccChhHccccCCCCEEECCCCcccccCchhhcc--cccCCEEEccCCcccccCHHHhhccccccccEEECCCCc
Confidence 999999777789999999999999999999877764322 356788899999887642 45789999999999
Q ss_pred CccCCCccccC
Q 012224 223 FVGSIPKCLEY 233 (468)
Q Consensus 223 l~g~ip~~~~~ 233 (468)
+++..|..+..
T Consensus 183 l~~~~~~~~~~ 193 (680)
T 1ziw_A 183 IKEFSPGCFHA 193 (680)
T ss_dssp CCCBCTTGGGG
T ss_pred ccccChhhhhh
Confidence 99988876643
No 60
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.74 E-value=4.6e-17 Score=154.62 Aligned_cols=157 Identities=22% Similarity=0.229 Sum_probs=133.9
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCCCcCCCCCcccceeec
Q 012224 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (468)
Q Consensus 70 ~~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~L 149 (468)
.+++.|+|++|.++...+..+..+++|++|+|++|.+++..+..|.++++|++|+|++|++++..|..+..+++|++|+|
T Consensus 61 ~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 140 (270)
T 2o6q_A 61 TKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSL 140 (270)
T ss_dssp TTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEEC
Confidence 57999999999999766666789999999999999999877778899999999999999999877788999999999999
Q ss_pred ccccCcccCChhccCCCCCcEEeccCCCCCccCCCCCCccccccccccccCCCCccCc-----cCCCCCCEEEcccCcCc
Q 012224 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL-----CHLSQLKVADFSYNFFV 224 (468)
Q Consensus 150 s~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~~-----~~l~~L~~l~ls~N~l~ 224 (468)
++|.+++..+..+..+++|++|++++|.+++..+..... ..++..+++++|+++++ ..+++|+.|++++|.+.
T Consensus 141 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~--l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 218 (270)
T 2o6q_A 141 GYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDK--LTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWD 218 (270)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTT--CTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred CCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhcc--CCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCee
Confidence 999999666666899999999999999999544432221 24678889999988764 45789999999999998
Q ss_pred cCCC
Q 012224 225 GSIP 228 (468)
Q Consensus 225 g~ip 228 (468)
...+
T Consensus 219 c~c~ 222 (270)
T 2o6q_A 219 CTCN 222 (270)
T ss_dssp CSSS
T ss_pred CCCc
Confidence 6543
No 61
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.74 E-value=2.6e-18 Score=178.58 Aligned_cols=171 Identities=26% Similarity=0.258 Sum_probs=97.4
Q ss_pred CEEEEEecCCCCcccCCccc-----cCCCCCCEEEccCccccccCCh-h-------------------------hcCCCC
Q 012224 71 RVLKINISGSSLKGFLAPEL-----GLLTYLQELILHGNNLIGIIPK-E-------------------------LGLLKR 119 (468)
Q Consensus 71 ~v~~L~L~~n~l~g~~p~~l-----~~l~~L~~L~Ls~N~l~g~ip~-~-------------------------~~~l~~ 119 (468)
+++.|+|++|.++|.+|..+ +.+++|+.+++++|.+ .+|. . +..+++
T Consensus 248 ~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~l~~ 325 (520)
T 2z7x_B 248 TVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISP 325 (520)
T ss_dssp SCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCC
T ss_pred cccEEEeecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcCCCccccccchhhCCc
Confidence 56667777777776666666 5555555555555555 3331 1 145666
Q ss_pred CCEEEccCCCCCCCCCcCCCCCcccceeecccccCcc--cCChhccCCCCCcEEeccCCCCCccCCCCCCcccccccccc
Q 012224 120 LKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTG--RLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGM 197 (468)
Q Consensus 120 L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g--~~p~~l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~ 197 (468)
|++|+|++|++++.+|..++.+++|++|+|++|++++ .+|..+..+++|++|++++|.+++.+|...... ...+..+
T Consensus 326 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~-l~~L~~L 404 (520)
T 2z7x_B 326 FLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSW-TKSLLSL 404 (520)
T ss_dssp CCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCC-CTTCCEE
T ss_pred ccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhcc-CccCCEE
Confidence 6666666666666666666666666666666666665 455666666666666666666665555432211 1345555
Q ss_pred ccCCCCccCcc--CC-CCCCEEEcccCcCccCCCcccc---CCCCCcccCCcCC
Q 012224 198 YASSANLTGLC--HL-SQLKVADFSYNFFVGSIPKCLE---YLPSTSFQGNCLQ 245 (468)
Q Consensus 198 ~ls~n~l~~~~--~l-~~L~~l~ls~N~l~g~ip~~~~---~l~~~~~~~n~~~ 245 (468)
++++|.+++.. .+ ++|+.||+++|+++ .+|..+. ++..+++++|.+.
T Consensus 405 ~Ls~N~l~~~~~~~l~~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~ 457 (520)
T 2z7x_B 405 NMSSNILTDTIFRCLPPRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLK 457 (520)
T ss_dssp ECCSSCCCGGGGGSCCTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC
T ss_pred ECcCCCCCcchhhhhcccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCC
Confidence 66666554321 12 45666666666665 5554432 2333445555444
No 62
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.74 E-value=4.1e-17 Score=151.09 Aligned_cols=159 Identities=25% Similarity=0.281 Sum_probs=130.1
Q ss_pred ccceeeCCCCCCEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCCCcCCC
Q 012224 60 WTGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIG 139 (468)
Q Consensus 60 w~gv~C~~~~~~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~ 139 (468)
|..-.|. .+.++.+++.++. +|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|+|++..+..|.
T Consensus 14 ~~~~~Cs-----~~~v~c~~~~l~~-ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~ 85 (229)
T 3e6j_A 14 PSQCSCS-----GTTVDCRSKRHAS-VPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFD 85 (229)
T ss_dssp CTTCEEE-----TTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTT
T ss_pred CCCCEEe-----CCEeEccCCCcCc-cCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcc
Confidence 4445675 2468999999864 676554 8999999999999999899999999999999999999855556679
Q ss_pred CCcccceeecccccCcccCChhccCCCCCcEEeccCCCCCccCCCCCCccccccccccccCCCCccCccCCCCCCEEEcc
Q 012224 140 NLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFS 219 (468)
Q Consensus 140 ~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~~~~l~~L~~l~ls 219 (468)
.+++|++|+|++|++++..+..+..+++|++|+|++|.++ .+|.. +..+++|+.|+++
T Consensus 86 ~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~---------------------~~~l~~L~~L~L~ 143 (229)
T 3e6j_A 86 SLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRG---------------------IERLTHLTHLALD 143 (229)
T ss_dssp TCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTT---------------------GGGCTTCSEEECC
T ss_pred cCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcc---------------------cccCCCCCEEECC
Confidence 9999999999999999766777899999999999999998 77753 3456789999999
Q ss_pred cCcCccCCCccccC---CCCCcccCCcCCCCC
Q 012224 220 YNFFVGSIPKCLEY---LPSTSFQGNCLQNKD 248 (468)
Q Consensus 220 ~N~l~g~ip~~~~~---l~~~~~~~n~~~~~~ 248 (468)
+|++++..+..+.. +..+.+.+|.+...|
T Consensus 144 ~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 175 (229)
T 3e6j_A 144 QNQLKSIPHGAFDRLSSLTHAYLFGNPWDCEC 175 (229)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECTTSCBCTTB
T ss_pred CCcCCccCHHHHhCCCCCCEEEeeCCCccCCc
Confidence 99999776666654 445677888555443
No 63
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.73 E-value=1.3e-17 Score=176.43 Aligned_cols=175 Identities=18% Similarity=0.155 Sum_probs=114.0
Q ss_pred CCEEEEEecCCCCcccCCcc-ccCCCCCCEEEccCccccccC--ChhhcCCCCCCEEEccCCCCCCCCCcCCCCCcccce
Q 012224 70 DRVLKINISGSSLKGFLAPE-LGLLTYLQELILHGNNLIGII--PKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVK 146 (468)
Q Consensus 70 ~~v~~L~L~~n~l~g~~p~~-l~~l~~L~~L~Ls~N~l~g~i--p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~ 146 (468)
.+++.|+|++|.+.+.+|.. +..+++|++|+|++|.+++.. |..+..+++|++|++++|++++..|..+..+++|+.
T Consensus 325 ~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 404 (606)
T 3t6q_A 325 PSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLEL 404 (606)
T ss_dssp TTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSE
T ss_pred CcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCe
Confidence 46777777777777766654 677777777777777777654 666777777777777777777666777777777777
Q ss_pred eecccccCcccCChh-ccCCCCCcEEeccCCCCCccCCCCCCccccccccccccCCCCccC--------ccCCCCCCEEE
Q 012224 147 INLQSNGLTGRLPAE-LGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG--------LCHLSQLKVAD 217 (468)
Q Consensus 147 L~Ls~N~l~g~~p~~-l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~--------~~~l~~L~~l~ 217 (468)
|+|++|++++..|.. +..+++|++|++++|.+++..|..... ..++..+++++|.+.+ +..+++|+.|+
T Consensus 405 L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~--l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~ 482 (606)
T 3t6q_A 405 LDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDG--LPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILV 482 (606)
T ss_dssp EECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTT--CTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEE
T ss_pred EECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhC--CCCCCEEECCCCCCCccccccchhhccCCCccEEE
Confidence 777777777665543 667777777777777776655543221 2345566666666543 33456666666
Q ss_pred cccCcCccCCCccccCCC---CCcccCCcCCC
Q 012224 218 FSYNFFVGSIPKCLEYLP---STSFQGNCLQN 246 (468)
Q Consensus 218 ls~N~l~g~ip~~~~~l~---~~~~~~n~~~~ 246 (468)
+++|.+++..|..+..++ .+++++|.+..
T Consensus 483 Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 514 (606)
T 3t6q_A 483 LSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTS 514 (606)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECCSSCCCG
T ss_pred CCCCccCccChhhhccccCCCEEECCCCccCc
Confidence 666666666665554433 34556664443
No 64
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.73 E-value=8.3e-18 Score=166.07 Aligned_cols=133 Identities=20% Similarity=0.196 Sum_probs=109.0
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCCCc--CCCCCcccce
Q 012224 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPP--EIGNLTGLVK 146 (468)
Q Consensus 69 ~~~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~--~~~~l~~L~~ 146 (468)
..+++.|+|++|.+++..|..++.+++|++|+|++|.+++..+..+.++++|++|+|++|+++ .+|. .+..+++|++
T Consensus 75 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~ 153 (353)
T 2z80_A 75 CVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQI 153 (353)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCCE
T ss_pred CCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCcE
Confidence 358999999999999988888999999999999999999655555899999999999999999 5665 7889999999
Q ss_pred eeccccc-CcccCChhccCCCCCcEEeccCCCCCccCCCCCCccccccccccccCCCCc
Q 012224 147 INLQSNG-LTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANL 204 (468)
Q Consensus 147 L~Ls~N~-l~g~~p~~l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l 204 (468)
|++++|+ +++..|..+..+++|++|++++|.+++..|..... ..++..+++++|.+
T Consensus 154 L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~--l~~L~~L~l~~n~l 210 (353)
T 2z80_A 154 LRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKS--IQNVSHLILHMKQH 210 (353)
T ss_dssp EEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTT--CSEEEEEEEECSCS
T ss_pred EECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhc--cccCCeecCCCCcc
Confidence 9999994 77666788999999999999999999877764432 12344444444444
No 65
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.73 E-value=2.4e-18 Score=185.59 Aligned_cols=201 Identities=20% Similarity=0.123 Sum_probs=116.1
Q ss_pred hhHHHHHHHHHHhcccCCCCCCCCCCCCCCCCCCccceeeCCCCCCEEEEEec------------------CCCCcc---
Q 012224 26 TNEFWALTTFKEAIYEDPHLVLSNWNALDADPCHWTGIACSDARDRVLKINIS------------------GSSLKG--- 84 (468)
Q Consensus 26 ~~~~~aL~~~k~~~~~~~~~~l~~w~~~~~~~c~w~gv~C~~~~~~v~~L~L~------------------~n~l~g--- 84 (468)
+.+.++|+++..+.....+..-..|.......+.|.++.++ .++++.|+|. .|.|.+
T Consensus 131 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s--~~~~~~l~L~~n~~~~~~~~~l~~l~Ls~~~i~~~~~ 208 (727)
T 4b8c_D 131 DCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTATNSAVS--TPLTPKIELFANGKDEANQALLQHKKLSQYSIDEDDD 208 (727)
T ss_dssp -CCCHHHHHHHHHHHHHHTTC-----------------------------------------------------------
T ss_pred ccchhhhhhhhhhcccccCcccCCCcCCCCccccCCCceec--CCccceEEeeCCCCCcchhhHhhcCccCcccccCccc
Confidence 45678899988776433333345675544556789888776 3445554444 443333
Q ss_pred ------cCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCCCcCCCCCcccceeecccccCcccC
Q 012224 85 ------FLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRL 158 (468)
Q Consensus 85 ------~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~~ 158 (468)
..+..+..++.|+.|+|++|.+. .+|..+.++++|++|+|++|.|+ .+|..|+.+++|++|+|++|.|+ .+
T Consensus 209 ~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~l 285 (727)
T 4b8c_D 209 IENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SL 285 (727)
T ss_dssp -------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SC
T ss_pred cccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-cc
Confidence 12556778888999999999888 78888888899999999999988 88888888999999999999988 88
Q ss_pred ChhccCCCCCcEEeccCCCCCccCCCCCCccccccccccccCCCCccCccC-----C-CCCCEEEcccCcCccCCCcccc
Q 012224 159 PAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCH-----L-SQLKVADFSYNFFVGSIPKCLE 232 (468)
Q Consensus 159 p~~l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~~~~-----l-~~L~~l~ls~N~l~g~ip~~~~ 232 (468)
|..|+.|++|++|+|++|.|+ .+|..+.. ..++..+++++|.+++... + ..+..++|++|.++|.+|..+.
T Consensus 286 p~~~~~l~~L~~L~L~~N~l~-~lp~~~~~--l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~l~ 362 (727)
T 4b8c_D 286 PAELGSCFQLKYFYFFDNMVT-TLPWEFGN--LCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHERR 362 (727)
T ss_dssp CSSGGGGTTCSEEECCSSCCC-CCCSSTTS--CTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC--
T ss_pred ChhhcCCCCCCEEECCCCCCC-ccChhhhc--CCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccccc
Confidence 888888899999999999887 77765322 2456667777777765321 0 0112356777777777776654
Q ss_pred CC
Q 012224 233 YL 234 (468)
Q Consensus 233 ~l 234 (468)
.+
T Consensus 363 ~l 364 (727)
T 4b8c_D 363 FI 364 (727)
T ss_dssp --
T ss_pred ee
Confidence 43
No 66
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.72 E-value=1.4e-17 Score=150.57 Aligned_cols=110 Identities=13% Similarity=0.204 Sum_probs=98.5
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCCCcCCCCCcccceeec
Q 012224 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (468)
Q Consensus 70 ~~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~L 149 (468)
.+++.|++++|.++ .+| .+..+++|++|++++|.++ .+..+..+++|++|++++|++++..|..+..+++|++|+|
T Consensus 44 ~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L 119 (197)
T 4ezg_A 44 NSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDI 119 (197)
T ss_dssp HTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEEC
T ss_pred CCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEe
Confidence 37899999999998 466 7999999999999999765 3457999999999999999999888999999999999999
Q ss_pred ccccCcccCChhccCCCCCcEEeccCCCCCccCC
Q 012224 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVP 183 (468)
Q Consensus 150 s~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~ip 183 (468)
++|++++..|..+..+++|++|++++|.+.+.+|
T Consensus 120 s~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~ 153 (197)
T 4ezg_A 120 SHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM 153 (197)
T ss_dssp CSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG
T ss_pred cCCccCcHhHHHHhhCCCCCEEEccCCCCccccH
Confidence 9999999899999999999999999998444555
No 67
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.72 E-value=1.9e-17 Score=146.90 Aligned_cols=127 Identities=24% Similarity=0.324 Sum_probs=96.2
Q ss_pred CCCccceeeCCC---------CCCEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccC
Q 012224 57 PCHWTGIACSDA---------RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGT 127 (468)
Q Consensus 57 ~c~w~gv~C~~~---------~~~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~ 127 (468)
.|+|+++.|... ..+++.|+|++|.+++..+..++.+++|++|+|++|.+++..+..|..+++|++|+|++
T Consensus 6 ~C~~~~l~~~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 6 SCSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp EEETTEEECCSSCCSSCCTTCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred EeCCCEEEecCCCCccCCCCCCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 468999999731 24678888888888876666677888888888888888866666678888888888888
Q ss_pred CCCCCCCCcCCCCCcccceeecccccCcccCChhccCCCCCcEEeccCCCCCccCC
Q 012224 128 NQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVP 183 (468)
Q Consensus 128 N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~ip 183 (468)
|++++..|..+..+++|++|+|++|++++..+..+..+++|++|++++|.+++..|
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 88886666667788888888888888885444456778888888888888876554
No 68
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.72 E-value=8.4e-17 Score=154.52 Aligned_cols=170 Identities=24% Similarity=0.253 Sum_probs=140.6
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCCCcCCCCCcccceee
Q 012224 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (468)
Q Consensus 69 ~~~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ 148 (468)
..+++.+++++++++. +|..+. +.+++|+|++|.+++..|..|.++++|++|+|++|++++ +|.. +.+++|++|+
T Consensus 9 l~~l~~l~~~~~~l~~-ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~-~~l~~L~~L~ 83 (290)
T 1p9a_G 9 VASHLEVNCDKRNLTA-LPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTK-LQVD-GTLPVLGTLD 83 (290)
T ss_dssp STTCCEEECTTSCCSS-CCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCE-EECC-SCCTTCCEEE
T ss_pred cCCccEEECCCCCCCc-CCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCc-ccCC-CCCCcCCEEE
Confidence 3578899999999985 676664 789999999999999889999999999999999999995 4543 8899999999
Q ss_pred cccccCcccCChhccCCCCCcEEeccCCCCCccCCCCCCccccccccccccCCCCccCc-----cCCCCCCEEEcccCcC
Q 012224 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL-----CHLSQLKVADFSYNFF 223 (468)
Q Consensus 149 Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~~-----~~l~~L~~l~ls~N~l 223 (468)
|++|+++ .+|..+..+++|++|++++|++++..|..+.. ..++..+++++|+++++ ..+++|+.|++++|++
T Consensus 84 Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~--l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 160 (290)
T 1p9a_G 84 LSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRG--LGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNL 160 (290)
T ss_dssp CCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTT--CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCC
T ss_pred CCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcC--CCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcC
Confidence 9999999 89999999999999999999999554443322 24678889999998764 4678999999999999
Q ss_pred ccCCCcccc---CCCCCcccCCcCCC
Q 012224 224 VGSIPKCLE---YLPSTSFQGNCLQN 246 (468)
Q Consensus 224 ~g~ip~~~~---~l~~~~~~~n~~~~ 246 (468)
++..+..+. ++..+.+++|.+..
T Consensus 161 ~~l~~~~~~~l~~L~~L~L~~N~l~~ 186 (290)
T 1p9a_G 161 TELPAGLLNGLENLDTLLLQENSLYT 186 (290)
T ss_dssp SCCCTTTTTTCTTCCEEECCSSCCCC
T ss_pred CccCHHHhcCcCCCCEEECCCCcCCc
Confidence 965554444 45567788886664
No 69
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.71 E-value=1.8e-17 Score=177.90 Aligned_cols=111 Identities=21% Similarity=0.254 Sum_probs=63.1
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCCCcCCCCCcccceeecc
Q 012224 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (468)
Q Consensus 71 ~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls 150 (468)
+++.|+|++|.+++..|..++.+++|++|+|++|.+++..+..|.++++|++|+|++|++++..|..|+.+++|++|+|+
T Consensus 50 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 129 (680)
T 1ziw_A 50 QLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLS 129 (680)
T ss_dssp TCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECC
T ss_pred cCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECC
Confidence 45566666666665555555556666666666665554333345555666666666665554444555555556666666
Q ss_pred cccCcccCChhccCCCCCcEEeccCCCCCcc
Q 012224 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGA 181 (468)
Q Consensus 151 ~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~ 181 (468)
+|.+++..|..++++++|++|++++|.+++.
T Consensus 130 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 160 (680)
T 1ziw_A 130 HNGLSSTKLGTQVQLENLQELLLSNNKIQAL 160 (680)
T ss_dssp SSCCSCCCCCSSSCCTTCCEEECCSSCCCCB
T ss_pred CCcccccCchhhcccccCCEEEccCCccccc
Confidence 5555555555555555555555555555543
No 70
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.70 E-value=4.5e-17 Score=169.17 Aligned_cols=171 Identities=18% Similarity=0.195 Sum_probs=124.6
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCC--CCCcCCCCCcccceee
Q 012224 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTG--PIPPEIGNLTGLVKIN 148 (468)
Q Consensus 71 ~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g--~iP~~~~~l~~L~~L~ 148 (468)
+++.|++++|.+.+.. ....+++|++|+|++|.+++.+|..+.++++|++|+|++|++++ .+|..+..+++|++|+
T Consensus 303 ~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~ 380 (520)
T 2z7x_B 303 NIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLD 380 (520)
T ss_dssp CCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEE
T ss_pred ceeEEEcCCCcccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEE
Confidence 5777888888776532 12567778888888888887777778888888888888888875 5666777888888888
Q ss_pred cccccCcccCChh-ccCCCCCcEEeccCCCCCccCCCCCCccccccccccccCCCCccCc----cCCCCCCEEEcccCcC
Q 012224 149 LQSNGLTGRLPAE-LGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL----CHLSQLKVADFSYNFF 223 (468)
Q Consensus 149 Ls~N~l~g~~p~~-l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~~----~~l~~L~~l~ls~N~l 223 (468)
|++|.+++.+|.. +..+++|++|++++|.+++.+|.... ..+..+++++|+++.+ ..+++|+.|++++|++
T Consensus 381 Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~----~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~L~~N~l 456 (520)
T 2z7x_B 381 ISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP----PRIKVLDLHSNKIKSIPKQVVKLEALQELNVASNQL 456 (520)
T ss_dssp CCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC----TTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSCC
T ss_pred CCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc----ccCCEEECCCCcccccchhhhcCCCCCEEECCCCcC
Confidence 8888888766664 66777888888888888777665432 3566777777777643 3578899999999999
Q ss_pred ccCCCcc-ccC---CCCCcccCCcCCCCC
Q 012224 224 VGSIPKC-LEY---LPSTSFQGNCLQNKD 248 (468)
Q Consensus 224 ~g~ip~~-~~~---l~~~~~~~n~~~~~~ 248 (468)
+ .+|.. +.. +..+++++|.+.+.|
T Consensus 457 ~-~l~~~~~~~l~~L~~L~l~~N~~~c~c 484 (520)
T 2z7x_B 457 K-SVPDGIFDRLTSLQKIWLHTNPWDCSC 484 (520)
T ss_dssp C-CCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred C-ccCHHHhccCCcccEEECcCCCCcccC
Confidence 8 56654 544 455678888666544
No 71
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.70 E-value=3.9e-17 Score=167.89 Aligned_cols=177 Identities=21% Similarity=0.215 Sum_probs=125.9
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCCCcCCCCCcccceeec
Q 012224 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (468)
Q Consensus 70 ~~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~L 149 (468)
.+++.|+|++|.+++..+..+..+++|++|+|++|.+++..|..|.++++|+.|+|++|.+++..|..|..+++|+.|+|
T Consensus 80 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 159 (477)
T 2id5_A 80 FNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTL 159 (477)
T ss_dssp TTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEE
T ss_pred ccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEEC
Confidence 57888999999888766666888889999999999988888888888888999999888888777888888888888888
Q ss_pred ccccCcccCChhccCCCCCcEEeccCCCCCccCCCCCCcc----------------------ccccccccccCCCCccCc
Q 012224 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSG----------------------YTANIHGMYASSANLTGL 207 (468)
Q Consensus 150 s~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~ip~~~~~~----------------------~~~~l~~~~ls~n~l~~~ 207 (468)
++|++++..+..+..+++|+.|++++|.+++..+...... ...++..+++++|.++.+
T Consensus 160 ~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ 239 (477)
T 2id5_A 160 EKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAV 239 (477)
T ss_dssp ESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSC
T ss_pred CCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCccccc
Confidence 8888886555667778888888888887775444321110 001344556666665543
Q ss_pred -----cCCCCCCEEEcccCcCccCCCccccCC---CCCcccCCcCCC
Q 012224 208 -----CHLSQLKVADFSYNFFVGSIPKCLEYL---PSTSFQGNCLQN 246 (468)
Q Consensus 208 -----~~l~~L~~l~ls~N~l~g~ip~~~~~l---~~~~~~~n~~~~ 246 (468)
..+++|+.|++++|.+++..+..+..+ ..+.+++|.+..
T Consensus 240 ~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 286 (477)
T 2id5_A 240 PYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAV 286 (477)
T ss_dssp CHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSE
T ss_pred CHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccce
Confidence 356677777777777776655555433 344556664443
No 72
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=99.70 E-value=3.3e-18 Score=165.28 Aligned_cols=91 Identities=31% Similarity=0.396 Sum_probs=75.4
Q ss_pred HhhHhHhccCCceEEEEEEEC------CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCC
Q 012224 360 EDFSNIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPF 433 (468)
Q Consensus 360 ~~~~~~lg~G~~g~vy~~~~~------~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~ 433 (468)
-.|.+.||+|+||.||+|++. +++.||||++.... .....++|.+|++++++++|||||+++|+|.+.+
T Consensus 28 ~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~---~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~-- 102 (308)
T 4gt4_A 28 VRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA---EGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQ-- 102 (308)
T ss_dssp EEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-C---CC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--
T ss_pred CeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECccc---ChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECC--
Confidence 345578999999999999873 46789999985332 2234578999999999999999999999999876
Q ss_pred cEEEEEEecCCCChhhhhhcCC
Q 012224 434 TRMLVFDYASNGTLYEHLHCKS 455 (468)
Q Consensus 434 ~~~lv~ey~~~GsL~~~L~~~~ 455 (468)
..+||||||++|+|.++|+.++
T Consensus 103 ~~~lV~Ey~~~G~L~~~L~~~~ 124 (308)
T 4gt4_A 103 PLSMIFSYCSHGDLHEFLVMRS 124 (308)
T ss_dssp SCEEEEECCSSCBHHHHHHTTC
T ss_pred EEEEEEEcCCCCcHHHHHHhhC
Confidence 7899999999999999997643
No 73
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.70 E-value=3.5e-16 Score=142.42 Aligned_cols=151 Identities=21% Similarity=0.197 Sum_probs=117.0
Q ss_pred EEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCCCcCCCCCcccceeecccc
Q 012224 73 LKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152 (468)
Q Consensus 73 ~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls~N 152 (468)
+.++.++++++. +|..+ .++|++|+|++|.+++..+..|.++++|++|+|++|++++..+..+..+++|++|+|++|
T Consensus 10 ~~v~c~~~~l~~-~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRTS-VPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCSS-CCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCccC-CCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 468889988875 45444 568999999999999777777899999999999999999666666789999999999999
Q ss_pred cCcccCChhccCCCCCcEEeccCCCCCccCCCCCCccccccccccccCCCCccCc-----cCCCCCCEEEcccCcCccCC
Q 012224 153 GLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL-----CHLSQLKVADFSYNFFVGSI 227 (468)
Q Consensus 153 ~l~g~~p~~l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~~-----~~l~~L~~l~ls~N~l~g~i 227 (468)
++++..+..+..+++|++|++++|.+++..+..... ..++..+++++|+++++ ..+++|+.|++++|.+.+..
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~--l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 164 (208)
T 2o6s_A 87 QLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDK--LTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTC 164 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTT--CTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCT
T ss_pred cCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhcc--CCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecCC
Confidence 999666667899999999999999999544432211 13456666676666542 34566777777777766554
Q ss_pred C
Q 012224 228 P 228 (468)
Q Consensus 228 p 228 (468)
|
T Consensus 165 ~ 165 (208)
T 2o6s_A 165 P 165 (208)
T ss_dssp T
T ss_pred C
Confidence 4
No 74
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.70 E-value=2.1e-17 Score=160.22 Aligned_cols=177 Identities=16% Similarity=0.154 Sum_probs=144.9
Q ss_pred CCCEEEEEecCCCCcccCC----ccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCC--CC--cCCCC
Q 012224 69 RDRVLKINISGSSLKGFLA----PELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGP--IP--PEIGN 140 (468)
Q Consensus 69 ~~~v~~L~L~~n~l~g~~p----~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~--iP--~~~~~ 140 (468)
..+++.|+|++|.+++..+ ..+..+++|++|+|++|.+++..|..|..+++|++|||++|++.+. +| ..++.
T Consensus 116 ~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~ 195 (310)
T 4glp_A 116 GLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHK 195 (310)
T ss_dssp CBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTS
T ss_pred CCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhc
Confidence 4578999999999998766 3456799999999999999988889999999999999999998753 32 33478
Q ss_pred CcccceeecccccCcccCCh----hccCCCCCcEEeccCCCCCccCCCCCCcc-ccccccccccCCCCccCccC--CCCC
Q 012224 141 LTGLVKINLQSNGLTGRLPA----ELGNLISLEELHLDRNRLQGAVPAGSNSG-YTANIHGMYASSANLTGLCH--LSQL 213 (468)
Q Consensus 141 l~~L~~L~Ls~N~l~g~~p~----~l~~l~~L~~L~ls~N~l~g~ip~~~~~~-~~~~l~~~~ls~n~l~~~~~--l~~L 213 (468)
+++|++|+|++|+++ .+|. .+..+++|++|+|++|.+++.+|...... ...++..+++++|+++.+.. .++|
T Consensus 196 l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~L 274 (310)
T 4glp_A 196 FPAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLEQVPKGLPAKL 274 (310)
T ss_dssp SCCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCCSCCSCCCSCC
T ss_pred CCCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCCchhhhhcCCC
Confidence 999999999999997 4444 25788999999999999998878654331 12478889999999986532 3689
Q ss_pred CEEEcccCcCcc-CCCccccCCCCCcccCCcCCC
Q 012224 214 KVADFSYNFFVG-SIPKCLEYLPSTSFQGNCLQN 246 (468)
Q Consensus 214 ~~l~ls~N~l~g-~ip~~~~~l~~~~~~~n~~~~ 246 (468)
+.||+++|++++ .++..+.++..+.+++|.+..
T Consensus 275 ~~L~Ls~N~l~~~~~~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 275 RVLDLSSNRLNRAPQPDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp SCEECCSCCCCSCCCTTSCCCCSCEECSSTTTSC
T ss_pred CEEECCCCcCCCCchhhhCCCccEEECcCCCCCC
Confidence 999999999998 566777888889999996654
No 75
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.70 E-value=2.2e-17 Score=145.11 Aligned_cols=138 Identities=22% Similarity=0.184 Sum_probs=113.4
Q ss_pred CCEEEEEecCCCCc-ccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCCCcCCCCCcccceee
Q 012224 70 DRVLKINISGSSLK-GFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (468)
Q Consensus 70 ~~v~~L~L~~n~l~-g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ 148 (468)
.+++.|+|++|.++ +.+|..+..+++|++|+|++|.+++. ..+..+++|++|+|++|++++.+|..+..+++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 57899999999998 78898889999999999999999865 6788999999999999999988888888899999999
Q ss_pred cccccCccc-CChhccCCCCCcEEeccCCCCCccCCCCCCccccccccccccCCCCccCccCCCCCCEEEcccCcCccCC
Q 012224 149 LQSNGLTGR-LPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSI 227 (468)
Q Consensus 149 Ls~N~l~g~-~p~~l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~~~~l~~L~~l~ls~N~l~g~i 227 (468)
|++|++++. .+..+..+++|++|++++|.+++..+... ..+..+++|+.||+++|.+. .+
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~------------------~~~~~l~~L~~L~l~~n~~~-~~ 162 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRE------------------SVFKLLPQLTYLDGYDREDQ-EA 162 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHH------------------HHHTTCSSCCEETTEETTSC-BC
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHH------------------HHHHhCccCcEecCCCCChh-hc
Confidence 999999853 22788999999999999999984432000 02345778999999999886 34
Q ss_pred C
Q 012224 228 P 228 (468)
Q Consensus 228 p 228 (468)
|
T Consensus 163 ~ 163 (168)
T 2ell_A 163 P 163 (168)
T ss_dssp C
T ss_pred c
Confidence 4
No 76
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.69 E-value=8.8e-17 Score=168.76 Aligned_cols=155 Identities=21% Similarity=0.230 Sum_probs=137.2
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCCEEEccCccccc--cCChhhcCCCCCCEEEccCCCCCCCCCcC-CCCCcccc
Q 012224 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIG--IIPKELGLLKRLKILDLGTNQLTGPIPPE-IGNLTGLV 145 (468)
Q Consensus 69 ~~~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g--~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~-~~~l~~L~ 145 (468)
..+++.|+|++|.+++.+|..++.+++|++|+|++|.+++ .+|..+.++++|++|+|++|++++.+|.. +..+++|+
T Consensus 352 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~ 431 (562)
T 3a79_B 352 PSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESIL 431 (562)
T ss_dssp CCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCC
T ss_pred CCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCC
Confidence 5689999999999999999999999999999999999997 45678999999999999999999878865 78899999
Q ss_pred eeecccccCcccCChhccCCCCCcEEeccCCCCCccCCCCCCccccccccccccCCCCccC-----ccCCCCCCEEEccc
Q 012224 146 KINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSY 220 (468)
Q Consensus 146 ~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~-----~~~l~~L~~l~ls~ 220 (468)
.|+|++|++++.+|..+. ++|+.|++++|+++ .+|.... ....+..+++++|+++. +..+++|+.+++++
T Consensus 432 ~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~--~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~ 506 (562)
T 3a79_B 432 VLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVT--HLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHD 506 (562)
T ss_dssp EEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTT--SSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCS
T ss_pred EEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhc--CCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecC
Confidence 999999999998887765 79999999999999 7887554 23568889999999876 34578999999999
Q ss_pred CcCccCCC
Q 012224 221 NFFVGSIP 228 (468)
Q Consensus 221 N~l~g~ip 228 (468)
|++++..|
T Consensus 507 N~~~c~c~ 514 (562)
T 3a79_B 507 NPWDCTCP 514 (562)
T ss_dssp CCBCCCHH
T ss_pred CCcCCCcc
Confidence 99998776
No 77
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.69 E-value=1.7e-16 Score=155.12 Aligned_cols=169 Identities=24% Similarity=0.326 Sum_probs=122.4
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCC--CCCCcCCCCCccccee
Q 012224 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLT--GPIPPEIGNLTGLVKI 147 (468)
Q Consensus 70 ~~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~--g~iP~~~~~l~~L~~L 147 (468)
.+++.|+|++|.++ .+|..+. ++|++|++++|.+++..+..+.++++|++|++++|.++ |..|..+..+++|++|
T Consensus 100 ~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L 176 (330)
T 1xku_A 100 VKLERLYLSKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYI 176 (330)
T ss_dssp TTCCEEECCSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEE
T ss_pred CCCCEEECCCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEE
Confidence 47888999988887 4666554 68888888888888777777888888888888888885 3667777888888888
Q ss_pred ecccccCcccCChhccCCCCCcEEeccCCCCCccCCCCCCccccccccccccCCCCccC-----ccCCCCCCEEEcccCc
Q 012224 148 NLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSYNF 222 (468)
Q Consensus 148 ~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~-----~~~l~~L~~l~ls~N~ 222 (468)
++++|.++ .+|..+. ++|++|++++|.+++..|..... ..++..+++++|.+.+ +..+++|+.|++++|+
T Consensus 177 ~l~~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~--l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~ 251 (330)
T 1xku_A 177 RIADTNIT-TIPQGLP--PSLTELHLDGNKITKVDAASLKG--LNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNK 251 (330)
T ss_dssp ECCSSCCC-SCCSSCC--TTCSEEECTTSCCCEECTGGGTT--CTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSC
T ss_pred ECCCCccc-cCCcccc--ccCCEEECCCCcCCccCHHHhcC--CCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCc
Confidence 88888887 5666554 67888888888887665543221 2356677777777754 3456778888888888
Q ss_pred CccCCCccccCC---CCCcccCCcCCCC
Q 012224 223 FVGSIPKCLEYL---PSTSFQGNCLQNK 247 (468)
Q Consensus 223 l~g~ip~~~~~l---~~~~~~~n~~~~~ 247 (468)
++ .+|..+..+ ..+++++|.+...
T Consensus 252 l~-~lp~~l~~l~~L~~L~l~~N~i~~~ 278 (330)
T 1xku_A 252 LV-KVPGGLADHKYIQVVYLHNNNISAI 278 (330)
T ss_dssp CS-SCCTTTTTCSSCCEEECCSSCCCCC
T ss_pred Cc-cCChhhccCCCcCEEECCCCcCCcc
Confidence 87 677666544 4456777766554
No 78
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.69 E-value=1.2e-16 Score=156.24 Aligned_cols=168 Identities=19% Similarity=0.264 Sum_probs=129.0
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCCCcCCCCCcccceee
Q 012224 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (468)
Q Consensus 69 ~~~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ 148 (468)
..+++.|+|++|.+++..|..++.+++|++|+|++|.++ .+|..+. ++|++|++++|++++..+..+..+++|+.|+
T Consensus 77 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~ 153 (332)
T 2ft3_A 77 LQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIE 153 (332)
T ss_dssp CTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEE
T ss_pred CCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEE
Confidence 357999999999999988999999999999999999998 6777665 8999999999999966666789999999999
Q ss_pred cccccCc--ccCChhccCCCCCcEEeccCCCCCccCCCCCCccccccccccccCCCCccC-----ccCCCCCCEEEcccC
Q 012224 149 LQSNGLT--GRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSYN 221 (468)
Q Consensus 149 Ls~N~l~--g~~p~~l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~-----~~~l~~L~~l~ls~N 221 (468)
+++|.++ +..|..+..+ +|+.|++++|.+++ +|.... .++..+++++|.+.+ +..+++|+.|++++|
T Consensus 154 l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~----~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N 227 (332)
T 2ft3_A 154 MGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLP----ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHN 227 (332)
T ss_dssp CCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSC----SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSS
T ss_pred CCCCccccCCCCcccccCC-ccCEEECcCCCCCc-cCcccc----CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCC
Confidence 9999996 4778888877 88888888888874 665432 345566677766654 334566777777777
Q ss_pred cCccCCCccccC---CCCCcccCCcCC
Q 012224 222 FFVGSIPKCLEY---LPSTSFQGNCLQ 245 (468)
Q Consensus 222 ~l~g~ip~~~~~---l~~~~~~~n~~~ 245 (468)
.+++..|..+.. +..+++++|.+.
T Consensus 228 ~l~~~~~~~~~~l~~L~~L~L~~N~l~ 254 (332)
T 2ft3_A 228 QIRMIENGSLSFLPTLRELHLDNNKLS 254 (332)
T ss_dssp CCCCCCTTGGGGCTTCCEEECCSSCCC
T ss_pred cCCcCChhHhhCCCCCCEEECCCCcCe
Confidence 777665544433 334455666444
No 79
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.69 E-value=6.2e-17 Score=169.88 Aligned_cols=177 Identities=20% Similarity=0.132 Sum_probs=124.1
Q ss_pred CCEEEEEecCCCCcccC--CccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCCC-cCCCCCcccce
Q 012224 70 DRVLKINISGSSLKGFL--APELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIP-PEIGNLTGLVK 146 (468)
Q Consensus 70 ~~v~~L~L~~n~l~g~~--p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP-~~~~~l~~L~~ 146 (468)
.+++.|+|++|.+++.. |..+..+++|++|+|++|.+++..+ .+..+++|+.|++++|.+++..| ..+..+++|++
T Consensus 347 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~ 425 (570)
T 2z63_A 347 PSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSS-NFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIY 425 (570)
T ss_dssp TTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEE-EEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCE
T ss_pred CCCCEEeCcCCccCccccccccccccCccCEEECCCCccccccc-cccccCCCCEEEccCCccccccchhhhhcCCCCCE
Confidence 46777777777777543 5667777777888888777775444 37778888888888888776665 45777888888
Q ss_pred eecccccCcccCChhccCCCCCcEEeccCCCCC-ccCCCCCCccccccccccccCCCCccCc-----cCCCCCCEEEccc
Q 012224 147 INLQSNGLTGRLPAELGNLISLEELHLDRNRLQ-GAVPAGSNSGYTANIHGMYASSANLTGL-----CHLSQLKVADFSY 220 (468)
Q Consensus 147 L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~-g~ip~~~~~~~~~~l~~~~ls~n~l~~~-----~~l~~L~~l~ls~ 220 (468)
|+|++|.+++.+|..+..+++|++|++++|.++ +.+|..... ..++..+++++|++++. ..+++|+.|++++
T Consensus 426 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~--l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 503 (570)
T 2z63_A 426 LDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTE--LRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMAS 503 (570)
T ss_dssp EECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTT--CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred EeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhc--ccCCCEEECCCCccccCChhhhhcccCCCEEeCCC
Confidence 888888888777777888888888888888876 566653322 24566777777777653 4567788888888
Q ss_pred CcCccCCCccccCC---CCCcccCCcCCCCCC
Q 012224 221 NFFVGSIPKCLEYL---PSTSFQGNCLQNKDP 249 (468)
Q Consensus 221 N~l~g~ip~~~~~l---~~~~~~~n~~~~~~~ 249 (468)
|++++..|..+..+ ..+++++|.+.+.|+
T Consensus 504 n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 535 (570)
T 2z63_A 504 NQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 535 (570)
T ss_dssp SCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CcCCCCCHHHhhcccCCcEEEecCCcccCCCc
Confidence 88887776666544 345677775555443
No 80
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.69 E-value=1.6e-17 Score=161.61 Aligned_cols=165 Identities=19% Similarity=0.145 Sum_probs=107.1
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCCCcCCCCCcccceeec
Q 012224 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (468)
Q Consensus 70 ~~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~L 149 (468)
.+++.|+|++|.+++..+ +..+++|++|+|++|.+++.. .+++|++|++++|++++..+. .+++|+.|+|
T Consensus 58 ~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~---~~~~L~~L~l 127 (317)
T 3o53_A 58 TKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPSIETLHAANNNISRVSCS---RGQGKKNIYL 127 (317)
T ss_dssp TTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEEE-----ECTTCCEEECCSSCCSEEEEC---CCSSCEEEEC
T ss_pred CcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCcccccc-----CCCCcCEEECCCCccCCcCcc---ccCCCCEEEC
Confidence 467778888887776554 777777888888877777432 235666666666666643332 2566777888
Q ss_pred ccccCcccCChhccCCCCCcEEeccCCCCCccCCCCCCccccccccccccCCCCccCc---cCCCCCCEEEcccCcCccC
Q 012224 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL---CHLSQLKVADFSYNFFVGS 226 (468)
Q Consensus 150 s~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~~---~~l~~L~~l~ls~N~l~g~ 226 (468)
++|++++..|..++.+++|++|++++|.+++..|..... ....+..+++++|.++++ ..+++|+.|++++|++++.
T Consensus 128 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-~l~~L~~L~L~~N~l~~~~~~~~l~~L~~L~Ls~N~l~~l 206 (317)
T 3o53_A 128 ANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAA-SSDTLEHLNLQYNFIYDVKGQVVFAKLKTLDLSSNKLAFM 206 (317)
T ss_dssp CSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGG-GTTTCCEEECTTSCCCEEECCCCCTTCCEEECCSSCCCEE
T ss_pred CCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhh-ccCcCCEEECCCCcCcccccccccccCCEEECCCCcCCcc
Confidence 888877666667777778888888888877654443211 123566677777777543 3466778888888887754
Q ss_pred CCccc---cCCCCCcccCCcCCC
Q 012224 227 IPKCL---EYLPSTSFQGNCLQN 246 (468)
Q Consensus 227 ip~~~---~~l~~~~~~~n~~~~ 246 (468)
.| .+ .++..+++++|.+..
T Consensus 207 ~~-~~~~l~~L~~L~L~~N~l~~ 228 (317)
T 3o53_A 207 GP-EFQSAAGVTWISLRNNKLVL 228 (317)
T ss_dssp CG-GGGGGTTCSEEECTTSCCCE
T ss_pred hh-hhcccCcccEEECcCCcccc
Confidence 33 34 344556677775553
No 81
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.69 E-value=5.6e-17 Score=169.56 Aligned_cols=156 Identities=19% Similarity=0.186 Sum_probs=132.1
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCC-CCCcCCCCCccccee
Q 012224 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTG-PIPPEIGNLTGLVKI 147 (468)
Q Consensus 69 ~~~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g-~iP~~~~~l~~L~~L 147 (468)
-.++++|+|++|.+++..|..++.+++|++|+|++|.+++..|..|+++++|++|||++|++++ .+|..++.+++|++|
T Consensus 49 l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L 128 (549)
T 2z81_A 49 CANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTL 128 (549)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEE
T ss_pred CCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEE
Confidence 3589999999999999888999999999999999999998888889999999999999999997 578899999999999
Q ss_pred ecccccCcccCC-hhccCCCCCcEEeccCCCCCccCCCCCCccccccccccccCCCCccCc-----cCCCCCCEEEcccC
Q 012224 148 NLQSNGLTGRLP-AELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL-----CHLSQLKVADFSYN 221 (468)
Q Consensus 148 ~Ls~N~l~g~~p-~~l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~~-----~~l~~L~~l~ls~N 221 (468)
+|++|.+.+.+| ..+..+++|++|++++|.+++.+|..... ..++..++++.|.+..+ ..+++|+.|++++|
T Consensus 129 ~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~--l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n 206 (549)
T 2z81_A 129 RIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKS--IRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDT 206 (549)
T ss_dssp EEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTT--CSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESC
T ss_pred ECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhc--cccCceEecccCcccccchhhHhhcccccEEEccCC
Confidence 999999666776 58999999999999999999988875433 23456666766665432 24677888888888
Q ss_pred cCccC
Q 012224 222 FFVGS 226 (468)
Q Consensus 222 ~l~g~ 226 (468)
++++.
T Consensus 207 ~l~~~ 211 (549)
T 2z81_A 207 NLARF 211 (549)
T ss_dssp BCTTC
T ss_pred ccccc
Confidence 88764
No 82
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.67 E-value=2e-17 Score=142.31 Aligned_cols=111 Identities=23% Similarity=0.225 Sum_probs=101.6
Q ss_pred CCEEEEEecCCCCc-ccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCCCcCCCCCcccceee
Q 012224 70 DRVLKINISGSSLK-GFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (468)
Q Consensus 70 ~~v~~L~L~~n~l~-g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ 148 (468)
.+++.|++++|.++ +.+|..+..+++|++|+|++|.+++. ..+..+++|++|+|++|++++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 47899999999999 88999999999999999999999976 7799999999999999999988998888899999999
Q ss_pred cccccCccc-CChhccCCCCCcEEeccCCCCCccC
Q 012224 149 LQSNGLTGR-LPAELGNLISLEELHLDRNRLQGAV 182 (468)
Q Consensus 149 Ls~N~l~g~-~p~~l~~l~~L~~L~ls~N~l~g~i 182 (468)
|++|.+++. .|..+..+++|++|++++|.+++..
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 129 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLN 129 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGST
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchH
Confidence 999999963 4588999999999999999998543
No 83
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.67 E-value=2.1e-16 Score=153.04 Aligned_cols=165 Identities=20% Similarity=0.335 Sum_probs=118.8
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCCCcCCCCCcccceeec
Q 012224 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (468)
Q Consensus 70 ~~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~L 149 (468)
.+++.|+|++|.+++..+ +..+++|++|+|++|.+++ +| .+..+++|++|+|++|++++ +|. +..+++|++|+|
T Consensus 63 ~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l 136 (308)
T 1h6u_A 63 NNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYL 136 (308)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEEC
T ss_pred CCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEEC
Confidence 478888888888877443 8888888888888888875 34 68888888888888888885 443 788888888888
Q ss_pred ccccCcccCChhccCCCCCcEEeccCCCCCccCCCCCCccccccccccccCCCCccCc---cCCCCCCEEEcccCcCccC
Q 012224 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL---CHLSQLKVADFSYNFFVGS 226 (468)
Q Consensus 150 s~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~~---~~l~~L~~l~ls~N~l~g~ 226 (468)
++|.+++ +|. +..+++|+.|++++|.+++. +.. ....++..+++++|.++++ ..+++|+.|++++|++++.
T Consensus 137 ~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~-~~l---~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~L~~N~l~~~ 210 (308)
T 1h6u_A 137 DLNQITN-ISP-LAGLTNLQYLSIGNAQVSDL-TPL---ANLSKLTTLKADDNKISDISPLASLPNLIEVHLKNNQISDV 210 (308)
T ss_dssp CSSCCCC-CGG-GGGCTTCCEEECCSSCCCCC-GGG---TTCTTCCEEECCSSCCCCCGGGGGCTTCCEEECTTSCCCBC
T ss_pred CCCccCc-Ccc-ccCCCCccEEEccCCcCCCC-hhh---cCCCCCCEEECCCCccCcChhhcCCCCCCEEEccCCccCcc
Confidence 8888884 343 77888888888888888753 321 1124567778888877664 4567888888888888866
Q ss_pred CC-ccccCCCCCcccCCcCCC
Q 012224 227 IP-KCLEYLPSTSFQGNCLQN 246 (468)
Q Consensus 227 ip-~~~~~l~~~~~~~n~~~~ 246 (468)
.| ..+.++..+.+++|.+..
T Consensus 211 ~~l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 211 SPLANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp GGGTTCTTCCEEEEEEEEEEC
T ss_pred ccccCCCCCCEEEccCCeeec
Confidence 54 112334445666775433
No 84
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.67 E-value=1.2e-16 Score=167.57 Aligned_cols=172 Identities=20% Similarity=0.178 Sum_probs=137.7
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCCCcCCCCCcccceee
Q 012224 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (468)
Q Consensus 69 ~~~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ 148 (468)
..+++.|+|++|.+++..+..+..+++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..|..+++|++|+
T Consensus 27 ~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (570)
T 2z63_A 27 PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 106 (570)
T ss_dssp CSSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEE
T ss_pred cccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccccccc
Confidence 35799999999999998888999999999999999999988888999999999999999999987788999999999999
Q ss_pred cccccCcccCChhccCCCCCcEEeccCCCCCc-cCCCCCCccccccccccccCCCCccCc-----cCCCCC----CEEEc
Q 012224 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQG-AVPAGSNSGYTANIHGMYASSANLTGL-----CHLSQL----KVADF 218 (468)
Q Consensus 149 Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g-~ip~~~~~~~~~~l~~~~ls~n~l~~~-----~~l~~L----~~l~l 218 (468)
|++|++++..+..++++++|++|++++|.+++ .+|..... ..++..+++++|.+.++ ..+.+| ..+++
T Consensus 107 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~--l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l 184 (570)
T 2z63_A 107 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSN--LTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDL 184 (570)
T ss_dssp CTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGG--CTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEEC
T ss_pred ccccccccCCCccccccccccEEecCCCccceecChhhhcc--cCCCCEEeCcCCccceecHHHccchhccchhhhhccc
Confidence 99999996555579999999999999999986 46754321 24566677777776543 233445 67788
Q ss_pred ccCcCccCCCccccC--CCCCcccCC
Q 012224 219 SYNFFVGSIPKCLEY--LPSTSFQGN 242 (468)
Q Consensus 219 s~N~l~g~ip~~~~~--l~~~~~~~n 242 (468)
++|.+++..|..+.. +..+.+.+|
T Consensus 185 ~~n~l~~~~~~~~~~~~L~~L~l~~n 210 (570)
T 2z63_A 185 SLNPMNFIQPGAFKEIRLHKLTLRNN 210 (570)
T ss_dssp TTCCCCEECTTTTTTCEEEEEEEESC
T ss_pred CCCCceecCHHHhccCcceeEecccc
Confidence 888877776665543 334444444
No 85
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.67 E-value=7e-16 Score=138.86 Aligned_cols=128 Identities=30% Similarity=0.408 Sum_probs=109.6
Q ss_pred EEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCCCcCCCCCcccceeeccccc
Q 012224 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNG 153 (468)
Q Consensus 74 ~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls~N~ 153 (468)
.+++++|+++ .+|..+. ++|++|+|++|.++ .+|..|.++++|++|+|++|++++..|..|..+++|++|+|++|+
T Consensus 14 ~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 14 VVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 4666777777 4676553 68999999999998 788999999999999999999998878889999999999999999
Q ss_pred CcccCChhccCCCCCcEEeccCCCCCccCCCCCCccccccccccccCCCCccCccCCCCCCEEEcccCcCccC
Q 012224 154 LTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGS 226 (468)
Q Consensus 154 l~g~~p~~l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~~~~l~~L~~l~ls~N~l~g~ 226 (468)
+++..|..|..+++|++|+|++|.++ .+|.. .+..+++|+.|++++|.+...
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~-~~~~~--------------------~~~~l~~L~~L~L~~N~~~C~ 141 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDIS-VVPEG--------------------AFNDLSALSHLAIGANPLYCD 141 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCC-BCCTT--------------------TTTTCTTCCEEECCSSCEECS
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCC-eeChh--------------------hhhcCccccEEEeCCCCeecC
Confidence 99888888999999999999999998 45542 133567899999999998754
No 86
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=99.67 E-value=1.2e-16 Score=155.74 Aligned_cols=86 Identities=23% Similarity=0.352 Sum_probs=74.5
Q ss_pred hHhccCCceEEEEEEEC------CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEE
Q 012224 364 NIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~------~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~l 437 (468)
+.||+|+||.||+|++. +++.||||++... .....++|.+|+++|++++|||||+++|+|.+.+ ..+|
T Consensus 47 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~----~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~--~~~l 120 (329)
T 4aoj_A 47 WELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA----SESARQDFQREAELLTMLQHQHIVRFFGVCTEGR--PLLM 120 (329)
T ss_dssp EEEEECSSEEEEEEEESSSCC---CEEEEEEEESCC----SHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS--SEEE
T ss_pred EEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcC----CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC--EEEE
Confidence 67999999999999874 4778999998432 2345678999999999999999999999999876 7999
Q ss_pred EEEecCCCChhhhhhcCC
Q 012224 438 VFDYASNGTLYEHLHCKS 455 (468)
Q Consensus 438 v~ey~~~GsL~~~L~~~~ 455 (468)
|||||++|+|.++|+...
T Consensus 121 V~Ey~~~G~L~~~l~~~~ 138 (329)
T 4aoj_A 121 VFEYMRHGDLNRFLRSHG 138 (329)
T ss_dssp EEECCTTCBHHHHHHTSS
T ss_pred EEEcCCCCcHHHHHHhcC
Confidence 999999999999998654
No 87
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.67 E-value=8e-16 Score=136.32 Aligned_cols=132 Identities=26% Similarity=0.298 Sum_probs=112.7
Q ss_pred EEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCCCcCCCCCcccceeecccc
Q 012224 73 LKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152 (468)
Q Consensus 73 ~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls~N 152 (468)
+.+++++++++. +|..+ .++|++|+|++|.+++..+..|..+++|++|+|++|++++..+..+..+++|+.|+|++|
T Consensus 10 ~~l~~~~~~l~~-~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 86 (177)
T 2o6r_A 10 TEIRCNSKGLTS-VPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN 86 (177)
T ss_dssp TEEECCSSCCSS-CCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCCcc-CCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence 578999999886 55444 479999999999999777777899999999999999999766667899999999999999
Q ss_pred cCcccCChhccCCCCCcEEeccCCCCCccCCCCCCccccccccccccCCCCccCccCCCCCCEEEcccCcCccCCC
Q 012224 153 GLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIP 228 (468)
Q Consensus 153 ~l~g~~p~~l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~~~~l~~L~~l~ls~N~l~g~ip 228 (468)
++++..+..+..+++|++|++++|.++ .+|... +..+++|+.|++++|.+++..|
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~~~~~--------------------~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 87 KLQSLPNGVFDKLTQLKELALDTNQLK-SVPDGI--------------------FDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCS-CCCTTT--------------------TTTCTTCCEEECCSSCBCCCHH
T ss_pred CccccCHHHhhCCcccCEEECcCCcce-EeCHHH--------------------hcCCcccCEEEecCCCeeccCc
Confidence 999777777899999999999999998 445421 2346789999999999998766
No 88
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.67 E-value=2.8e-16 Score=141.53 Aligned_cols=123 Identities=21% Similarity=0.293 Sum_probs=109.6
Q ss_pred CCCccceeeCC---------CCCCEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccC
Q 012224 57 PCHWTGIACSD---------ARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGT 127 (468)
Q Consensus 57 ~c~w~gv~C~~---------~~~~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~ 127 (468)
.|.|..+.|.. ....++.|+|++|.|+ .+|..+..+++|++|+|++|.+++..|..|.++++|++|+|++
T Consensus 9 ~C~~~~l~~~~~~l~~ip~~~~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~ 87 (193)
T 2wfh_A 9 TCLDTVVRCSNKGLKVLPKGIPRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSY 87 (193)
T ss_dssp EEETTEEECTTSCCSSCCSCCCTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred EeCCCEEEcCCCCCCcCCCCCCCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCC
Confidence 35677777763 1247899999999998 6889999999999999999999988888999999999999999
Q ss_pred CCCCCCCCcCCCCCcccceeecccccCcccCChhccCCCCCcEEeccCCCCCc
Q 012224 128 NQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQG 180 (468)
Q Consensus 128 N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g 180 (468)
|+|++..|..|..+++|++|+|++|++++..+..+..+++|+.|++++|.+..
T Consensus 88 N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 88 NRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp SCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 99998888889999999999999999996555678999999999999999874
No 89
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.66 E-value=2.8e-16 Score=166.11 Aligned_cols=175 Identities=19% Similarity=0.182 Sum_probs=135.5
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCCCcCCCCCcccceeec
Q 012224 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (468)
Q Consensus 70 ~~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~L 149 (468)
.+++.|++++|.+....+..+..+++|++|+|++|.+++..|..|..+++|++|+|++|.+++..|..|+.+++|++|+|
T Consensus 51 ~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 130 (597)
T 3oja_B 51 NNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 130 (597)
T ss_dssp CCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEe
Confidence 35788999999998866666889999999999999999988889999999999999999999888888999999999999
Q ss_pred ccccCcccCChhccCCCCCcEEeccCCCCCccCCCCCCccccccccccccCCCCccCc--cCCCCCCEEEcccCcCcc--
Q 012224 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL--CHLSQLKVADFSYNFFVG-- 225 (468)
Q Consensus 150 s~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~~--~~l~~L~~l~ls~N~l~g-- 225 (468)
++|.+++..+..|+++++|++|+|++|.+++..|..... ..++..+++++|.++++ ..+++|+.|++++|.+++
T Consensus 131 ~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~--l~~L~~L~L~~N~l~~~~~~~l~~L~~L~l~~n~l~~l~ 208 (597)
T 3oja_B 131 ERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQA--TTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLA 208 (597)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTT--CTTCCEEECTTSCCSBCCGGGCTTCSEEECCSSCCSEEE
T ss_pred eCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhc--CCcCcEEECcCCCCCCcChhhhhhhhhhhcccCcccccc
Confidence 999999554555799999999999999999877754322 24566677777776653 334555555555555543
Q ss_pred -----------------CCCccccCCCCCcccCCcCCC
Q 012224 226 -----------------SIPKCLEYLPSTSFQGNCLQN 246 (468)
Q Consensus 226 -----------------~ip~~~~~l~~~~~~~n~~~~ 246 (468)
..+....++..+.+++|.+..
T Consensus 209 ~~~~L~~L~ls~n~l~~~~~~~~~~L~~L~L~~n~l~~ 246 (597)
T 3oja_B 209 IPIAVEELDASHNSINVVRGPVNVELTILKLQHNNLTD 246 (597)
T ss_dssp CCTTCSEEECCSSCCCEEECSCCSCCCEEECCSSCCCC
T ss_pred CCchhheeeccCCcccccccccCCCCCEEECCCCCCCC
Confidence 333333445556666665555
No 90
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=99.66 E-value=1.2e-16 Score=153.65 Aligned_cols=85 Identities=25% Similarity=0.363 Sum_probs=71.9
Q ss_pred hHhccCCceEEEEEEEC------CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEE
Q 012224 364 NIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~------~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~l 437 (468)
+.||+|+||.||+|++. +|+.||||++... .....++|.+|+++|++++|||||+++|+|.+.+ ..+|
T Consensus 19 ~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~----~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~--~~~l 92 (299)
T 4asz_A 19 RELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA----SDNARKDFHREAELLTNLQHEHIVKFYGVCVEGD--PLIM 92 (299)
T ss_dssp EEEEC--CCCEEEEEECSCC----CEEEEEEEECSC----CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS--SEEE
T ss_pred eEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCC----ChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCC--EEEE
Confidence 67999999999999874 4778999998432 2345678999999999999999999999999876 7999
Q ss_pred EEEecCCCChhhhhhcC
Q 012224 438 VFDYASNGTLYEHLHCK 454 (468)
Q Consensus 438 v~ey~~~GsL~~~L~~~ 454 (468)
|||||++|+|.++|+..
T Consensus 93 V~Ey~~~G~L~~~l~~~ 109 (299)
T 4asz_A 93 VFEYMKHGDLNKFLRAH 109 (299)
T ss_dssp EEECCTTCBHHHHHHHT
T ss_pred EEEcCCCCcHHHHHHhc
Confidence 99999999999999864
No 91
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.66 E-value=1.2e-16 Score=164.81 Aligned_cols=156 Identities=18% Similarity=0.154 Sum_probs=108.0
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCCCcCCC-CCcccceee
Q 012224 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIG-NLTGLVKIN 148 (468)
Q Consensus 70 ~~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~-~l~~L~~L~ 148 (468)
..++.|+|++|.+++..+. .+++|++|+|++|.+++..|..++.+++|++|||++|.+++.+|..+. .+++|+.|+
T Consensus 99 ~~L~~L~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~ 175 (487)
T 3oja_A 99 PSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLN 175 (487)
T ss_dssp TTCCEEECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEE
T ss_pred CCcCEEECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEe
Confidence 4778888888888876553 457888999999999988888888889999999999999888888776 788999999
Q ss_pred cccccCcccCChhccCCCCCcEEeccCCCCCccCCCCCCccccccccccccCCCCccC----ccCCCCCCEEEcccCcCc
Q 012224 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG----LCHLSQLKVADFSYNFFV 224 (468)
Q Consensus 149 Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~----~~~l~~L~~l~ls~N~l~ 224 (468)
|++|.+++. |. +..+++|+.|+|++|.+++..|. .. ...++..+++++|.+++ +..+++|+.|++++|.++
T Consensus 176 Ls~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~~~~~-~~--~l~~L~~L~Ls~N~l~~lp~~l~~l~~L~~L~l~~N~l~ 250 (487)
T 3oja_A 176 LQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFMGPE-FQ--SAAGVTWISLRNNKLVLIEKALRFSQNLEHFDLRGNGFH 250 (487)
T ss_dssp CTTSCCCEE-EC-CCCCTTCCEEECCSSCCCEECGG-GG--GGTTCSEEECTTSCCCEECTTCCCCTTCCEEECTTCCBC
T ss_pred cCCCccccc-cc-cccCCCCCEEECCCCCCCCCCHh-Hc--CCCCccEEEecCCcCcccchhhccCCCCCEEEcCCCCCc
Confidence 999998865 33 34588899999999998864443 11 11233444444444433 223445555555555555
Q ss_pred -cCCCccccC
Q 012224 225 -GSIPKCLEY 233 (468)
Q Consensus 225 -g~ip~~~~~ 233 (468)
+.+|..+..
T Consensus 251 c~~~~~~~~~ 260 (487)
T 3oja_A 251 CGTLRDFFSK 260 (487)
T ss_dssp HHHHHHHHTT
T ss_pred CcchHHHHHh
Confidence 344444433
No 92
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.66 E-value=8.1e-16 Score=148.93 Aligned_cols=165 Identities=22% Similarity=0.335 Sum_probs=136.3
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCCCcCCCCCcccceeec
Q 012224 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (468)
Q Consensus 70 ~~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~L 149 (468)
.+++.|++++|.++. +| .+..+++|++|+|++|.+++. |. +..+++|++|+|++|++++ +| .+..+++|++|+|
T Consensus 41 ~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~-~~-~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l 114 (308)
T 1h6u_A 41 DGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDL-AP-LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDL 114 (308)
T ss_dssp HTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEEC
T ss_pred CCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCC-hh-HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEEC
Confidence 478999999999986 44 689999999999999999965 44 9999999999999999995 44 6999999999999
Q ss_pred ccccCcccCChhccCCCCCcEEeccCCCCCccCCCCCCccccccccccccCCCCccC---ccCCCCCCEEEcccCcCccC
Q 012224 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG---LCHLSQLKVADFSYNFFVGS 226 (468)
Q Consensus 150 s~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~---~~~l~~L~~l~ls~N~l~g~ 226 (468)
++|++++ +|. +..+++|++|++++|.+++..+ .....++..+++++|.+++ +..+++|+.|++++|.+++.
T Consensus 115 ~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~----l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~ 188 (308)
T 1h6u_A 115 TSTQITD-VTP-LAGLSNLQVLYLDLNQITNISP----LAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDI 188 (308)
T ss_dssp TTSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG----GGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCC
T ss_pred CCCCCCC-chh-hcCCCCCCEEECCCCccCcCcc----ccCCCCccEEEccCCcCCCChhhcCCCCCCEEECCCCccCcC
Confidence 9999995 554 8999999999999999985433 1122467888999998876 45678999999999999876
Q ss_pred CC-ccccCCCCCcccCCcCCC
Q 012224 227 IP-KCLEYLPSTSFQGNCLQN 246 (468)
Q Consensus 227 ip-~~~~~l~~~~~~~n~~~~ 246 (468)
.| ..+.++..+++++|.+..
T Consensus 189 ~~l~~l~~L~~L~L~~N~l~~ 209 (308)
T 1h6u_A 189 SPLASLPNLIEVHLKNNQISD 209 (308)
T ss_dssp GGGGGCTTCCEEECTTSCCCB
T ss_pred hhhcCCCCCCEEEccCCccCc
Confidence 54 234566677888886655
No 93
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.66 E-value=2.3e-17 Score=177.84 Aligned_cols=147 Identities=23% Similarity=0.296 Sum_probs=119.6
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCCCcCCCCCcccceee
Q 012224 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (468)
Q Consensus 69 ~~~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ 148 (468)
...++.|+|++|.+. .+|..+..+++|++|+|++|.|+ .+|..|++|++|++|||++|+|+ .+|..|+.+++|++|+
T Consensus 223 l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~ 299 (727)
T 4b8c_D 223 DQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFY 299 (727)
T ss_dssp CCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEE
T ss_pred CCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEE
Confidence 457899999999998 68989999999999999999999 89999999999999999999999 8999999999999999
Q ss_pred cccccCcccCChhccCCCCCcEEeccCCCCCccCCCCCCccccccccccccCCCCccCccCCCCCCEEEcccC
Q 012224 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYN 221 (468)
Q Consensus 149 Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~~~~l~~L~~l~ls~N 221 (468)
|++|.|+ .+|..|+.+++|+.|+|++|.|+|.+|..... .......+++++|.+++.. ...|..|++++|
T Consensus 300 L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-~~~~~~~l~l~~N~l~~~~-p~~l~~l~l~~n 369 (727)
T 4b8c_D 300 FFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTE-KSVTGLIFYLRDNRPEIPL-PHERRFIEINTD 369 (727)
T ss_dssp CCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHH-HHHHHHHHHHHHCCCCCCC-CCC---------
T ss_pred CCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhh-cchhhhHHhhccCcccCcC-ccccceeEeecc
Confidence 9999998 89999999999999999999999988864321 0112234678888887643 356888888887
No 94
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.66 E-value=6.8e-16 Score=161.10 Aligned_cols=153 Identities=28% Similarity=0.277 Sum_probs=93.4
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCCCcCCCCCcccceeec
Q 012224 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (468)
Q Consensus 70 ~~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~L 149 (468)
.+++.|+|++|.|+ .+| ..+++|++|+|++|.|++ +|. +.+ +|++|+|++|+|++ +|. .+++|+.|+|
T Consensus 80 ~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~L 147 (571)
T 3cvr_A 80 PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINA 147 (571)
T ss_dssp TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEEC
T ss_pred CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeC
Confidence 46777777777777 466 456777777777777776 666 554 77777777777775 665 5667777777
Q ss_pred ccccCcccCChhccCCCCCcEEeccCCCCCccCCCCCCccccccccccccCCCCccCccCCC-CC-------CEEEcccC
Q 012224 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLS-QL-------KVADFSYN 221 (468)
Q Consensus 150 s~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~~~~l~-~L-------~~l~ls~N 221 (468)
++|+|++ +|. .+++|++|+|++|.+++ +|. .. .++..+++++|.++.+..+. +| +.|+|++|
T Consensus 148 s~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~----~~L~~L~Ls~N~L~~lp~~~~~L~~~~~~L~~L~Ls~N 217 (571)
T 3cvr_A 148 DNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP----ESLEALDVSTNLLESLPAVPVRNHHSEETEIFFRCREN 217 (571)
T ss_dssp CSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC----TTCCEEECCSSCCSSCCCCC--------CCEEEECCSS
T ss_pred CCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh----CCCCEEECcCCCCCchhhHHHhhhcccccceEEecCCC
Confidence 7777764 555 45667777777777765 555 22 45555666666655432211 34 66666666
Q ss_pred cCccCCCccccCCC---CCcccCCcCC
Q 012224 222 FFVGSIPKCLEYLP---STSFQGNCLQ 245 (468)
Q Consensus 222 ~l~g~ip~~~~~l~---~~~~~~n~~~ 245 (468)
+++ .+|..+..++ .+++++|.+.
T Consensus 218 ~l~-~lp~~l~~l~~L~~L~L~~N~l~ 243 (571)
T 3cvr_A 218 RIT-HIPENILSLDPTCTIILEDNPLS 243 (571)
T ss_dssp CCC-CCCGGGGGSCTTEEEECCSSSCC
T ss_pred cce-ecCHHHhcCCCCCEEEeeCCcCC
Confidence 666 4555443333 3345555443
No 95
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.66 E-value=5.9e-17 Score=165.46 Aligned_cols=164 Identities=23% Similarity=0.155 Sum_probs=85.2
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCC---------------------------------
Q 012224 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLL--------------------------------- 117 (468)
Q Consensus 71 ~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l--------------------------------- 117 (468)
++++|++++|.+ |.+|++++++++|++|++++|.+.|.+|..++++
T Consensus 12 ~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~lp~~~ 90 (454)
T 1jl5_A 12 FLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSSLPELP 90 (454)
T ss_dssp -----------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSCCCSCC
T ss_pred cchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCccccCCCCc
Confidence 556666666666 5666666666666666666666666666555543
Q ss_pred CCCCEEEccCCCCCCCCCcCCCC----------------C-cccceeecccccCcccCChhccCCCCCcEEeccCCCCCc
Q 012224 118 KRLKILDLGTNQLTGPIPPEIGN----------------L-TGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQG 180 (468)
Q Consensus 118 ~~L~~L~Ls~N~l~g~iP~~~~~----------------l-~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g 180 (468)
++|++|++++|++++ +|..+.+ + ++|++|+|++|++++ +| .++++++|++|++++|++++
T Consensus 91 ~~L~~L~l~~n~l~~-lp~~~~~L~~L~l~~n~l~~l~~~~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~ 167 (454)
T 1jl5_A 91 PHLESLVASCNSLTE-LPELPQSLKSLLVDNNNLKALSDLPPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK 167 (454)
T ss_dssp TTCSEEECCSSCCSS-CCCCCTTCCEEECCSSCCSCCCSCCTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC
T ss_pred CCCCEEEccCCcCCc-cccccCCCcEEECCCCccCcccCCCCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc
Confidence 356666666666664 5543211 1 467777777777774 66 57778888888888888874
Q ss_pred cCCCCCCccccccccccccCCCCccCc---cCCCCCCEEEcccCcCccCCCccccCCCCCcccCCcCC
Q 012224 181 AVPAGSNSGYTANIHGMYASSANLTGL---CHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQ 245 (468)
Q Consensus 181 ~ip~~~~~~~~~~l~~~~ls~n~l~~~---~~l~~L~~l~ls~N~l~g~ip~~~~~l~~~~~~~n~~~ 245 (468)
+|... .++..+++++|.+.++ ..+++|+.|++++|++++ +|....++..+++++|.+.
T Consensus 168 -lp~~~-----~~L~~L~L~~n~l~~l~~~~~l~~L~~L~l~~N~l~~-l~~~~~~L~~L~l~~n~l~ 228 (454)
T 1jl5_A 168 -LPDLP-----PSLEFIAAGNNQLEELPELQNLPFLTAIYADNNSLKK-LPDLPLSLESIVAGNNILE 228 (454)
T ss_dssp -CCCCC-----TTCCEEECCSSCCSSCCCCTTCTTCCEEECCSSCCSS-CCCCCTTCCEEECCSSCCS
T ss_pred -cCCCc-----ccccEEECcCCcCCcCccccCCCCCCEEECCCCcCCc-CCCCcCcccEEECcCCcCC
Confidence 55432 2455666666666543 445666666666666664 4444444555555555433
No 96
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.65 E-value=1.5e-15 Score=155.15 Aligned_cols=160 Identities=19% Similarity=0.157 Sum_probs=93.2
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCCCcCCCCCcccceeecc
Q 012224 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (468)
Q Consensus 71 ~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls 150 (468)
+++.|+|++|.+++. | ++.+++|++|+|++|.+++. | ++++++|++|++++|++++ +| ++.+++|++|+++
T Consensus 65 ~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~ 135 (457)
T 3bz5_A 65 GLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCA 135 (457)
T ss_dssp TCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEECT
T ss_pred CCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEECC
Confidence 555666666666552 2 55566666666666666542 2 5556666666666666654 33 5566666666666
Q ss_pred cccCcccCChhccCCCCCcEEeccCCCCCccCCCCCCccccccccccccCCCCccC--ccCCCCCCEEEcccCcCccCCC
Q 012224 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG--LCHLSQLKVADFSYNFFVGSIP 228 (468)
Q Consensus 151 ~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~--~~~l~~L~~l~ls~N~l~g~ip 228 (468)
+|++++ +| ++.+++|++|++++|+..+.++-.. ...+..+++++|++++ +..+++|+.|++++|++++.--
T Consensus 136 ~N~l~~-l~--l~~l~~L~~L~l~~n~~~~~~~~~~----l~~L~~L~ls~n~l~~l~l~~l~~L~~L~l~~N~l~~~~l 208 (457)
T 3bz5_A 136 RNTLTE-ID--VSHNTQLTELDCHLNKKITKLDVTP----QTQLTTLDCSFNKITELDVSQNKLLNRLNCDTNNITKLDL 208 (457)
T ss_dssp TSCCSC-CC--CTTCTTCCEEECTTCSCCCCCCCTT----CTTCCEEECCSSCCCCCCCTTCTTCCEEECCSSCCSCCCC
T ss_pred CCccce-ec--cccCCcCCEEECCCCCccccccccc----CCcCCEEECCCCccceeccccCCCCCEEECcCCcCCeecc
Confidence 666664 32 5556666666666665544543221 1345666777777765 3456677788888887776522
Q ss_pred ccccCCCCCcccCCcCCC
Q 012224 229 KCLEYLPSTSFQGNCLQN 246 (468)
Q Consensus 229 ~~~~~l~~~~~~~n~~~~ 246 (468)
..+.++..+++++|.+..
T Consensus 209 ~~l~~L~~L~Ls~N~l~~ 226 (457)
T 3bz5_A 209 NQNIQLTFLDCSSNKLTE 226 (457)
T ss_dssp TTCTTCSEEECCSSCCSC
T ss_pred ccCCCCCEEECcCCcccc
Confidence 233445556677776655
No 97
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.64 E-value=7.7e-16 Score=153.99 Aligned_cols=172 Identities=19% Similarity=0.163 Sum_probs=146.8
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCCCcC-CCCCcccceee
Q 012224 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPE-IGNLTGLVKIN 148 (468)
Q Consensus 70 ~~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~-~~~l~~L~~L~ 148 (468)
.+++.|+|++|.+++..+..++.+++|++|+|++|.+++..|..|.++++|++|+|++|+++ .+|.. +..+++|++|+
T Consensus 69 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L~ 147 (390)
T 3o6n_A 69 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLS 147 (390)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEE
T ss_pred ccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccC-cCCHHHhcCCCCCcEEE
Confidence 47899999999999887789999999999999999999888888999999999999999999 56655 58899999999
Q ss_pred cccccCcccCChhccCCCCCcEEeccCCCCCccCCCCCCccccccccccccCCCCccCccCCCCCCEEEcccCcCccCCC
Q 012224 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIP 228 (468)
Q Consensus 149 Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~~~~l~~L~~l~ls~N~l~g~ip 228 (468)
|++|.+++..|..+..+++|++|++++|.+++. +.. ....+..+++++|.+.++....+|+.|++++|.++....
T Consensus 148 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~-~~~----~l~~L~~L~l~~n~l~~~~~~~~L~~L~l~~n~l~~~~~ 222 (390)
T 3o6n_A 148 MSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV-DLS----LIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRG 222 (390)
T ss_dssp CCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC-CGG----GCTTCSEEECCSSCCSEEECCSSCSEEECCSSCCCEEEC
T ss_pred CCCCccCccChhhccCCCCCCEEECCCCcCCcc-ccc----cccccceeecccccccccCCCCcceEEECCCCeeeeccc
Confidence 999999987788899999999999999999853 321 224577789999999998889999999999999997655
Q ss_pred ccccCCCCCcccCCcCCCC
Q 012224 229 KCLEYLPSTSFQGNCLQNK 247 (468)
Q Consensus 229 ~~~~~l~~~~~~~n~~~~~ 247 (468)
....++..+.+++|.+...
T Consensus 223 ~~~~~L~~L~l~~n~l~~~ 241 (390)
T 3o6n_A 223 PVNVELTILKLQHNNLTDT 241 (390)
T ss_dssp CCCSSCCEEECCSSCCCCC
T ss_pred cccccccEEECCCCCCccc
Confidence 5557788888999876653
No 98
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.64 E-value=2.6e-15 Score=153.43 Aligned_cols=162 Identities=20% Similarity=0.192 Sum_probs=114.3
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCCCcCCCCCcccceee
Q 012224 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (468)
Q Consensus 69 ~~~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ 148 (468)
..+++.|+|++|.+++. + ++.+++|++|+|++|.+++ +| ++.+++|++|++++|++++ +| ++.+++|++|+
T Consensus 84 l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~-l~--l~~l~~L~~L~ 154 (457)
T 3bz5_A 84 NTNLTYLACDSNKLTNL-D--VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTE-ID--VSHNTQLTELD 154 (457)
T ss_dssp CTTCSEEECCSSCCSCC-C--CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSC-CC--CTTCTTCCEEE
T ss_pred CCCCCEEECcCCCCcee-e--cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCccce-ec--cccCCcCCEEE
Confidence 35677888888888774 3 7778888888888888876 44 7778888888888888886 33 77788888888
Q ss_pred cccccCcccCChhccCCCCCcEEeccCCCCCccCCCCCCccccccccccccCCCCccC--ccCCCCCCEEEcccCcCccC
Q 012224 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG--LCHLSQLKVADFSYNFFVGS 226 (468)
Q Consensus 149 Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~--~~~l~~L~~l~ls~N~l~g~ 226 (468)
+++|...+.+ .++.+++|++|++++|++++ +|-.. ...+..+++++|.+++ +..+++|+.|++++|++++
T Consensus 155 l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~-l~l~~----l~~L~~L~l~~N~l~~~~l~~l~~L~~L~Ls~N~l~~- 226 (457)
T 3bz5_A 155 CHLNKKITKL--DVTPQTQLTTLDCSFNKITE-LDVSQ----NKLLNRLNCDTNNITKLDLNQNIQLTFLDCSSNKLTE- 226 (457)
T ss_dssp CTTCSCCCCC--CCTTCTTCCEEECCSSCCCC-CCCTT----CTTCCEEECCSSCCSCCCCTTCTTCSEEECCSSCCSC-
T ss_pred CCCCCccccc--ccccCCcCCEEECCCCccce-ecccc----CCCCCEEECcCCcCCeeccccCCCCCEEECcCCcccc-
Confidence 8888666666 36777888888888888875 45221 2356667777777765 3456778888888888887
Q ss_pred CC-ccccCCCCCcccCCcCCCC
Q 012224 227 IP-KCLEYLPSTSFQGNCLQNK 247 (468)
Q Consensus 227 ip-~~~~~l~~~~~~~n~~~~~ 247 (468)
+| ..+.++..+++++|.+...
T Consensus 227 ip~~~l~~L~~L~l~~N~l~~~ 248 (457)
T 3bz5_A 227 IDVTPLTQLTYFDCSVNPLTEL 248 (457)
T ss_dssp CCCTTCTTCSEEECCSSCCSCC
T ss_pred cCccccCCCCEEEeeCCcCCCc
Confidence 45 2223445566777766553
No 99
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.64 E-value=6.3e-16 Score=152.45 Aligned_cols=190 Identities=13% Similarity=0.129 Sum_probs=131.9
Q ss_pred CCccceeeCCC---------CCCEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCCh-hhcCCCCCCE-EEcc
Q 012224 58 CHWTGIACSDA---------RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPK-ELGLLKRLKI-LDLG 126 (468)
Q Consensus 58 c~w~gv~C~~~---------~~~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~-~~~~l~~L~~-L~Ls 126 (468)
|+|..|.|+.. ..++++|+|++|.|+...+..|..+++|++|+|++|.+.+.+|. .|.++++|+. ++++
T Consensus 9 C~~~~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 9 CSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp EETTEEEEESTTCCSCCTTCCTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred eeCCEEEecCCCCCccCcCcCCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 67889999631 24689999999999975556799999999999999999877775 5788988775 6677
Q ss_pred CCCCCCCCCcCCCCCcccceeecccccCcccCChhccCCCCCcEEeccCCCCCccCCCCCCccccccccccccCCCCccC
Q 012224 127 TNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG 206 (468)
Q Consensus 127 ~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~ 206 (468)
.|+++...|..|..+++|++|++++|++++..+..+....++..|++.++.--..+|..........+..+++++|.++.
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~ 168 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQE 168 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCE
T ss_pred CCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccC
Confidence 89999777788999999999999999998665555556667777777654333355554333333345556677776654
Q ss_pred cc----CCCCCCEEEcccCcCccCCCc-cc---cCCCCCcccCCcCCCC
Q 012224 207 LC----HLSQLKVADFSYNFFVGSIPK-CL---EYLPSTSFQGNCLQNK 247 (468)
Q Consensus 207 ~~----~l~~L~~l~ls~N~l~g~ip~-~~---~~l~~~~~~~n~~~~~ 247 (468)
+. ...+|+.+++++|+.-+.+|. .| .++..+++++|.+...
T Consensus 169 i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~l 217 (350)
T 4ay9_X 169 IHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSL 217 (350)
T ss_dssp ECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCC
T ss_pred CChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCcc
Confidence 32 234566666665444445553 23 3445556666655543
No 100
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.64 E-value=2.1e-15 Score=154.00 Aligned_cols=156 Identities=27% Similarity=0.312 Sum_probs=94.0
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCCCcCCCCCcccceeecc
Q 012224 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (468)
Q Consensus 71 ~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls 150 (468)
+++.|++++|.+++ +|.. .++|++|+|++|.+++ +| .|+++++|++|++++|++++ +|..+ .+|++|+|+
T Consensus 112 ~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~ 181 (454)
T 1jl5_A 112 SLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAG 181 (454)
T ss_dssp TCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECC
T ss_pred CCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECc
Confidence 45555555555554 2211 1577777777777775 66 47777777777777777774 66543 467777777
Q ss_pred cccCcccCChhccCCCCCcEEeccCCCCCccCCCCCCccccccccccccCCCCccC---ccCCCCCCEEEcccCcCccCC
Q 012224 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG---LCHLSQLKVADFSYNFFVGSI 227 (468)
Q Consensus 151 ~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~---~~~l~~L~~l~ls~N~l~g~i 227 (468)
+|++++ +| .++.+++|++|++++|.+++ +|... ..+..+++++|.+.. +..+++|+.|++++|++++ +
T Consensus 182 ~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~-----~~L~~L~l~~n~l~~lp~~~~l~~L~~L~l~~N~l~~-l 252 (454)
T 1jl5_A 182 NNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP-----LSLESIVAGNNILEELPELQNLPFLTTIYADNNLLKT-L 252 (454)
T ss_dssp SSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC-----TTCCEEECCSSCCSSCCCCTTCTTCCEEECCSSCCSS-C
T ss_pred CCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc-----CcccEEECcCCcCCcccccCCCCCCCEEECCCCcCCc-c
Confidence 777775 55 57777777777777777774 44321 234455555555443 2344556666666666653 4
Q ss_pred CccccCCCCCcccCCcCC
Q 012224 228 PKCLEYLPSTSFQGNCLQ 245 (468)
Q Consensus 228 p~~~~~l~~~~~~~n~~~ 245 (468)
|....++..+.+++|.+.
T Consensus 253 ~~~~~~L~~L~l~~N~l~ 270 (454)
T 1jl5_A 253 PDLPPSLEALNVRDNYLT 270 (454)
T ss_dssp CSCCTTCCEEECCSSCCS
T ss_pred cccccccCEEECCCCccc
Confidence 444445555555555443
No 101
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.63 E-value=1.9e-15 Score=149.64 Aligned_cols=150 Identities=23% Similarity=0.133 Sum_probs=126.1
Q ss_pred EEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhc-CCCCCCEEEccCCCCCCCCCcCCCCCcccceeecccc
Q 012224 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELG-LLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152 (468)
Q Consensus 74 ~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~-~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls~N 152 (468)
.+++++++|+. +|..+. ..++.|+|++|.|++..+..+. ++++|++|+|++|+|++..|..|..+++|++|+|++|
T Consensus 22 ~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 98 (361)
T 2xot_A 22 ILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSN 98 (361)
T ss_dssp EEECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EEEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCC
Confidence 68999999987 676654 4689999999999988888787 9999999999999999777788999999999999999
Q ss_pred cCcccCChhccCCCCCcEEeccCCCCCccCCCCCCccccccccccccCCCCccCccCCCCCCEEEcccCcCccCCCcc--
Q 012224 153 GLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKC-- 230 (468)
Q Consensus 153 ~l~g~~p~~l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~~~~l~~L~~l~ls~N~l~g~ip~~-- 230 (468)
+|++..+..|..+++|++|+|++|.+++..|.. +..+++|+.|+|++|++++..+..
T Consensus 99 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~---------------------~~~l~~L~~L~L~~N~l~~l~~~~~~ 157 (361)
T 2xot_A 99 HLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNA---------------------FEDMAQLQKLYLSQNQISRFPVELIK 157 (361)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCCEECTTT---------------------TTTCTTCCEEECCSSCCCSCCGGGTC
T ss_pred cCCcCCHHHhCCCcCCCEEECCCCcccEECHHH---------------------hCCcccCCEEECCCCcCCeeCHHHhc
Confidence 999777778999999999999999998655532 445788999999999999644433
Q ss_pred ----ccCCCCCcccCCcCCCC
Q 012224 231 ----LEYLPSTSFQGNCLQNK 247 (468)
Q Consensus 231 ----~~~l~~~~~~~n~~~~~ 247 (468)
+.++..+++++|.+...
T Consensus 158 ~~~~l~~L~~L~L~~N~l~~l 178 (361)
T 2xot_A 158 DGNKLPKLMLLDLSSNKLKKL 178 (361)
T ss_dssp ----CTTCCEEECCSSCCCCC
T ss_pred CcccCCcCCEEECCCCCCCcc
Confidence 34556678889977654
No 102
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.63 E-value=4.3e-16 Score=164.46 Aligned_cols=178 Identities=28% Similarity=0.335 Sum_probs=94.2
Q ss_pred CCCCCCCCCCCCCcccee--------eCCCCCCEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCC
Q 012224 47 LSNWNALDADPCHWTGIA--------CSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLK 118 (468)
Q Consensus 47 l~~w~~~~~~~c~w~gv~--------C~~~~~~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~ 118 (468)
...|.. +.++|.|+|.. |. ...++.|++++|+|+ .+|..+. ++|++|+|++|.++ .+|. .++
T Consensus 12 w~~W~~-~~~~~~~~~r~~~~~~~~~c~--~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~ 81 (622)
T 3g06_A 12 WSAWRR-AAPAEESRGRAAVVQKMRACL--NNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPP 81 (622)
T ss_dssp HHHHHH-TCCGGGHHHHHHHHHHHHHHH--HHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCT
T ss_pred HHHHHh-cCCcchhccccccCccccccc--CCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCC
Confidence 345653 34678886643 32 234667777777776 5666554 66777777777766 4554 456
Q ss_pred CCCEEEccCCCCCCCCCcCCCCCcccceeecccccCcccCChhccCCCCCcEEeccCCCCCccCCCCCCc----------
Q 012224 119 RLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNS---------- 188 (468)
Q Consensus 119 ~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~ip~~~~~---------- 188 (468)
+|++|||++|+|+ .+|. .+++|++|+|++|++++ +|. .+++|+.|++++|++++ +|.....
T Consensus 82 ~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~l~~L~~L~Ls~N~ 152 (622)
T 3g06_A 82 ELRTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPVLPPGLQELSVSDNQ 152 (622)
T ss_dssp TCCEEEECSCCCS-CCCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSC
T ss_pred CCCEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCCc-CCCCCCCCCEEECcCCc
Confidence 6777777777766 4554 45666666666666663 443 33445555555555542 3332100
Q ss_pred -----cccccccccccCCCCccCcc-CCCCCCEEEcccCcCccCCCccccCCCCCcccCCcC
Q 012224 189 -----GYTANIHGMYASSANLTGLC-HLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCL 244 (468)
Q Consensus 189 -----~~~~~l~~~~ls~n~l~~~~-~l~~L~~l~ls~N~l~g~ip~~~~~l~~~~~~~n~~ 244 (468)
....++..+++++|.++++. .+++|+.|++++|.+++ +|..+.++..+.+++|.+
T Consensus 153 l~~l~~~~~~L~~L~L~~N~l~~l~~~~~~L~~L~Ls~N~l~~-l~~~~~~L~~L~L~~N~l 213 (622)
T 3g06_A 153 LASLPALPSELCKLWAYNNQLTSLPMLPSGLQELSVSDNQLAS-LPTLPSELYKLWAYNNRL 213 (622)
T ss_dssp CSCCCCCCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCC
T ss_pred CCCcCCccCCCCEEECCCCCCCCCcccCCCCcEEECCCCCCCC-CCCccchhhEEECcCCcc
Confidence 00012333344444443322 12556666666666664 444444444444444433
No 103
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.63 E-value=1.2e-15 Score=146.48 Aligned_cols=159 Identities=23% Similarity=0.331 Sum_probs=89.9
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCCCcCCCCCcccceeecc
Q 012224 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (468)
Q Consensus 71 ~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls 150 (468)
+++.|++++|.+... +.+..+++|++|+|++|.+++..| +..+++|++|+|++|++++ +| .+..+++|++|+|+
T Consensus 47 ~L~~L~l~~~~i~~~--~~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~ 120 (291)
T 1h6t_A 47 SIDQIIANNSDIKSV--QGIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLE 120 (291)
T ss_dssp TCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECT
T ss_pred cccEEEccCCCcccC--hhHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECC
Confidence 456666666666543 235666666666666666664333 6666666666666666653 33 36666666666666
Q ss_pred cccCcccCChhccCCCCCcEEeccCCCCCccCCCCCCccccccccccccCCCCccC---ccCCCCCCEEEcccCcCccCC
Q 012224 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG---LCHLSQLKVADFSYNFFVGSI 227 (468)
Q Consensus 151 ~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~---~~~l~~L~~l~ls~N~l~g~i 227 (468)
+|++++ + +.+..+++|+.|++++|.+++. +. .....++..+++++|.+.+ +..+++|+.|++++|.+++ +
T Consensus 121 ~n~i~~-~-~~l~~l~~L~~L~l~~n~l~~~-~~---l~~l~~L~~L~L~~N~l~~~~~l~~l~~L~~L~L~~N~i~~-l 193 (291)
T 1h6t_A 121 HNGISD-I-NGLVHLPQLESLYLGNNKITDI-TV---LSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISD-L 193 (291)
T ss_dssp TSCCCC-C-GGGGGCTTCCEEECCSSCCCCC-GG---GGGCTTCSEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCB-C
T ss_pred CCcCCC-C-hhhcCCCCCCEEEccCCcCCcc-hh---hccCCCCCEEEccCCccccchhhcCCCccCEEECCCCcCCC-C
Confidence 666663 2 3455666666666666666532 21 0111345555666665544 3345667777777777764 3
Q ss_pred CccccC---CCCCcccCCc
Q 012224 228 PKCLEY---LPSTSFQGNC 243 (468)
Q Consensus 228 p~~~~~---l~~~~~~~n~ 243 (468)
|. +.. +..+.+++|.
T Consensus 194 ~~-l~~l~~L~~L~l~~n~ 211 (291)
T 1h6t_A 194 RA-LAGLKNLDVLELFSQE 211 (291)
T ss_dssp GG-GTTCTTCSEEEEEEEE
T ss_pred hh-hccCCCCCEEECcCCc
Confidence 32 333 3344555553
No 104
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.62 E-value=1.6e-15 Score=155.36 Aligned_cols=147 Identities=25% Similarity=0.380 Sum_probs=69.7
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCCCcCCCCCcccceeecc
Q 012224 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (468)
Q Consensus 71 ~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls 150 (468)
+++.|++++|.+++..| ++.+++|++|++++|.+++ + ..+..+++|+.|++++|.+++..| +..+++|+.|+|+
T Consensus 200 ~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~ 273 (466)
T 1o6v_A 200 NLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD-I-GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLG 273 (466)
T ss_dssp TCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-C-GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECC
T ss_pred CCCEEEecCCccccccc--ccccCCCCEEECCCCCccc-c-hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECC
Confidence 55556666655555433 4445555555555555543 2 234445555555555555543322 4444455555555
Q ss_pred cccCcccC---------------------ChhccCCCCCcEEeccCCCCCccCCCCCCccccccccccccCCCCccC---
Q 012224 151 SNGLTGRL---------------------PAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG--- 206 (468)
Q Consensus 151 ~N~l~g~~---------------------p~~l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~--- 206 (468)
+|.+++.. +. +..+++|+.|++++|++++..|.. ...++..+++++|.+++
T Consensus 274 ~n~l~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~L~~n~l~~~~~~~----~l~~L~~L~l~~n~l~~~~~ 348 (466)
T 1o6v_A 274 ANQISNISPLAGLTALTNLELNENQLEDISP-ISNLKNLTYLTLYFNNISDISPVS----SLTKLQRLFFYNNKVSDVSS 348 (466)
T ss_dssp SSCCCCCGGGTTCTTCSEEECCSSCCSCCGG-GGGCTTCSEEECCSSCCSCCGGGG----GCTTCCEEECCSSCCCCCGG
T ss_pred CCccCccccccCCCccCeEEcCCCcccCchh-hcCCCCCCEEECcCCcCCCchhhc----cCccCCEeECCCCccCCchh
Confidence 55444322 11 444445555555555544433311 11234444555555443
Q ss_pred ccCCCCCCEEEcccCcCccCCC
Q 012224 207 LCHLSQLKVADFSYNFFVGSIP 228 (468)
Q Consensus 207 ~~~l~~L~~l~ls~N~l~g~ip 228 (468)
+..+++|+.|++++|++++..|
T Consensus 349 l~~l~~L~~L~l~~n~l~~~~~ 370 (466)
T 1o6v_A 349 LANLTNINWLSAGHNQISDLTP 370 (466)
T ss_dssp GTTCTTCCEEECCSSCCCBCGG
T ss_pred hccCCCCCEEeCCCCccCccch
Confidence 2344555555555555555554
No 105
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=99.62 E-value=3.7e-16 Score=150.48 Aligned_cols=93 Identities=30% Similarity=0.450 Sum_probs=76.4
Q ss_pred hHhccCCceEEEEEEECCCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEecC
Q 012224 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~~ 443 (468)
+.||+|+||+||+|++.+ .||||+++.... .....++|.+|++++++++|||||+++|+|.+. ..+||||||+
T Consensus 42 ~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~--~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~---~~~iVmEy~~ 114 (307)
T 3omv_A 42 TRIGSGSFGTVYKGKWHG--DVAVKILKVVDP--TPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKD---NLAIVTQWCE 114 (307)
T ss_dssp EECCCCSSSEEEEEESSS--EEEEEECCCSSC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS---SCEEEEECCS
T ss_pred eEEeeCCCcEEEEEEECC--cEEEEEEEecCC--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEECC---eEEEEEEcCC
Confidence 679999999999999753 589999854322 234467899999999999999999999999753 5899999999
Q ss_pred CCChhhhhhcCCCCccccee
Q 012224 444 NGTLYEHLHCKSSSLYIIGL 463 (468)
Q Consensus 444 ~GsL~~~L~~~~~~~~~~~l 463 (468)
+|+|.++|+..+..++..++
T Consensus 115 gGsL~~~l~~~~~~l~~~~~ 134 (307)
T 3omv_A 115 GSSLYKHLHVQETKFQMFQL 134 (307)
T ss_dssp SCBHHHHHHTSCCCCCHHHH
T ss_pred CCCHHHHHhhcCCCCCHHHH
Confidence 99999999877665554443
No 106
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.62 E-value=1.9e-15 Score=145.16 Aligned_cols=145 Identities=26% Similarity=0.366 Sum_probs=124.9
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCCCcCCCCCcccceeec
Q 012224 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (468)
Q Consensus 70 ~~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~L 149 (468)
.+++.|+|++|.+++..+ +..+++|++|+|++|.+++ +| .+..+++|++|+|++|++++ + +.+..+++|+.|+|
T Consensus 68 ~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~-~-~~l~~l~~L~~L~l 141 (291)
T 1h6t_A 68 PNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYL 141 (291)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCC-C-GGGGGCTTCCEEEC
T ss_pred CCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCC-C-hhhcCCCCCCEEEc
Confidence 589999999999998544 9999999999999999986 44 49999999999999999996 4 57889999999999
Q ss_pred ccccCcccCChhccCCCCCcEEeccCCCCCccCCCCCCccccccccccccCCCCccCc---cCCCCCCEEEcccCcCccC
Q 012224 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL---CHLSQLKVADFSYNFFVGS 226 (468)
Q Consensus 150 s~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~~---~~l~~L~~l~ls~N~l~g~ 226 (468)
++|++++. ..+..+++|+.|++++|.+++..|- ....++..+++++|.++++ ..+++|+.|++++|+++..
T Consensus 142 ~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~l----~~l~~L~~L~L~~N~i~~l~~l~~l~~L~~L~l~~n~i~~~ 215 (291)
T 1h6t_A 142 GNNKITDI--TVLSRLTKLDTLSLEDNQISDIVPL----AGLTKLQNLYLSKNHISDLRALAGLKNLDVLELFSQECLNK 215 (291)
T ss_dssp CSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGGG----TTCTTCCEEECCSSCCCBCGGGTTCTTCSEEEEEEEEEECC
T ss_pred cCCcCCcc--hhhccCCCCCEEEccCCccccchhh----cCCCccCEEECCCCcCCCChhhccCCCCCEEECcCCcccCC
Confidence 99999964 6889999999999999999965541 1225678889999998764 5678999999999999853
No 107
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.61 E-value=1e-15 Score=160.22 Aligned_cols=109 Identities=26% Similarity=0.268 Sum_probs=101.8
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCCCcCCCCCcccceeecc
Q 012224 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (468)
Q Consensus 71 ~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls 150 (468)
.++.|+|++|.|++ +|. ++.+++|++|+|++|.|+ .+|..|+++++|+.|+|++|+|++ +| .++.+++|+.|+|+
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls 516 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLC 516 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECC
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECC
Confidence 57889999999998 676 999999999999999999 899999999999999999999996 78 89999999999999
Q ss_pred cccCcccC-ChhccCCCCCcEEeccCCCCCccCCC
Q 012224 151 SNGLTGRL-PAELGNLISLEELHLDRNRLQGAVPA 184 (468)
Q Consensus 151 ~N~l~g~~-p~~l~~l~~L~~L~ls~N~l~g~ip~ 184 (468)
+|+|++.. |..++.+++|+.|+|++|.+++..|.
T Consensus 517 ~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~ 551 (567)
T 1dce_A 517 NNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGI 551 (567)
T ss_dssp SSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSC
T ss_pred CCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccH
Confidence 99999877 99999999999999999999976654
No 108
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.60 E-value=3.6e-15 Score=157.11 Aligned_cols=146 Identities=26% Similarity=0.357 Sum_probs=123.0
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCCCcCCCCCcccceee
Q 012224 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (468)
Q Consensus 69 ~~~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ 148 (468)
..+++.|+|++|.|++..| +..+++|++|+|++|.+++ +| .+..+++|+.|+|++|++++ + +.+..+++|+.|+
T Consensus 64 l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~ 137 (605)
T 1m9s_A 64 LPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLY 137 (605)
T ss_dssp CTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEE
T ss_pred CCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEE
Confidence 3589999999999998554 8999999999999999985 44 78999999999999999985 4 4688999999999
Q ss_pred cccccCcccCChhccCCCCCcEEeccCCCCCccCCCCCCccccccccccccCCCCccCc---cCCCCCCEEEcccCcCcc
Q 012224 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL---CHLSQLKVADFSYNFFVG 225 (468)
Q Consensus 149 Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~~---~~l~~L~~l~ls~N~l~g 225 (468)
|++|.+++. ..+..+++|+.|+|++|.+++..|-. ...++..+++++|+++++ ..+++|+.|+|++|++++
T Consensus 138 Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~l~----~l~~L~~L~Ls~N~i~~l~~l~~l~~L~~L~L~~N~l~~ 211 (605)
T 1m9s_A 138 LGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVPLA----GLTKLQNLYLSKNHISDLRALAGLKNLDVLELFSQECLN 211 (605)
T ss_dssp CCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGGGT----TCTTCCEEECCSSCCCBCGGGTTCTTCSEEECCSEEEEC
T ss_pred CCCCccCCc--hhhcccCCCCEEECcCCcCCCchhhc----cCCCCCEEECcCCCCCCChHHccCCCCCEEEccCCcCcC
Confidence 999999964 67889999999999999999766621 225678889999988764 567889999999999986
Q ss_pred C
Q 012224 226 S 226 (468)
Q Consensus 226 ~ 226 (468)
.
T Consensus 212 ~ 212 (605)
T 1m9s_A 212 K 212 (605)
T ss_dssp C
T ss_pred C
Confidence 5
No 109
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.60 E-value=7.9e-16 Score=149.58 Aligned_cols=159 Identities=17% Similarity=0.131 Sum_probs=121.8
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCCCcCCC-CCcccceee
Q 012224 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIG-NLTGLVKIN 148 (468)
Q Consensus 70 ~~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~-~l~~L~~L~ 148 (468)
..++.|++++|.+++..+. .+++|++|+|++|.+++..|..+..+++|++|+|++|++++..|..+. .+++|++|+
T Consensus 99 ~~L~~L~l~~n~l~~~~~~---~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~ 175 (317)
T 3o53_A 99 PSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLN 175 (317)
T ss_dssp TTCCEEECCSSCCSEEEEC---CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEE
T ss_pred CCcCEEECCCCccCCcCcc---ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEE
Confidence 4788888888888876543 367899999999999987787888899999999999999977777764 789999999
Q ss_pred cccccCcccCChhccCCCCCcEEeccCCCCCccCCCCCCccccccccccccCCCCccC----ccCCCCCCEEEcccCcCc
Q 012224 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG----LCHLSQLKVADFSYNFFV 224 (468)
Q Consensus 149 Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~----~~~l~~L~~l~ls~N~l~ 224 (468)
|++|.+++. |. ...+++|++|++++|.+++. |.... ...++..+++++|+++. +..+++|+.|++++|.++
T Consensus 176 L~~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~l-~~~~~--~l~~L~~L~L~~N~l~~l~~~~~~l~~L~~L~l~~N~~~ 250 (317)
T 3o53_A 176 LQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFM-GPEFQ--SAAGVTWISLRNNKLVLIEKALRFSQNLEHFDLRGNGFH 250 (317)
T ss_dssp CTTSCCCEE-EC-CCCCTTCCEEECCSSCCCEE-CGGGG--GGTTCSEEECTTSCCCEECTTCCCCTTCCEEECTTCCCB
T ss_pred CCCCcCccc-cc-ccccccCCEEECCCCcCCcc-hhhhc--ccCcccEEECcCCcccchhhHhhcCCCCCEEEccCCCcc
Confidence 999999854 43 33588999999999999854 43221 12456777888887765 345678889999999888
Q ss_pred -cCCCccccCCCC
Q 012224 225 -GSIPKCLEYLPS 236 (468)
Q Consensus 225 -g~ip~~~~~l~~ 236 (468)
+.+|..+..++.
T Consensus 251 ~~~~~~~~~~~~~ 263 (317)
T 3o53_A 251 CGTLRDFFSKNQR 263 (317)
T ss_dssp HHHHHHHHHTCHH
T ss_pred CcCHHHHHhcccc
Confidence 667766666543
No 110
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.60 E-value=9.9e-16 Score=131.66 Aligned_cols=123 Identities=21% Similarity=0.230 Sum_probs=104.8
Q ss_pred CCCCCCEEEccCcccc-ccCChhhcCCCCCCEEEccCCCCCCCCCcCCCCCcccceeecccccCcccCChhccCCCCCcE
Q 012224 92 LLTYLQELILHGNNLI-GIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEE 170 (468)
Q Consensus 92 ~l~~L~~L~Ls~N~l~-g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~ 170 (468)
..++|+.|++++|.++ +.+|..+..+++|++|++++|++++. ..+..+++|++|+|++|.+++.+|..+..+++|++
T Consensus 15 ~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 92 (149)
T 2je0_A 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTH 92 (149)
T ss_dssp CGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCE
T ss_pred CCccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCE
Confidence 3478999999999999 89999999999999999999999965 78999999999999999999889999988999999
Q ss_pred EeccCCCCCcc-CCCCCCccccccccccccCCCCccCccCCCCCCEEEcccCcCccCCC---ccccCCCCC
Q 012224 171 LHLDRNRLQGA-VPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIP---KCLEYLPST 237 (468)
Q Consensus 171 L~ls~N~l~g~-ip~~~~~~~~~~l~~~~ls~n~l~~~~~l~~L~~l~ls~N~l~g~ip---~~~~~l~~~ 237 (468)
|++++|.+++. .|. .+..+++|+.|++++|.+++..+ ..+..++.+
T Consensus 93 L~ls~N~i~~~~~~~---------------------~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L 142 (149)
T 2je0_A 93 LNLSGNKIKDLSTIE---------------------PLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQL 142 (149)
T ss_dssp EECTTSCCCSHHHHG---------------------GGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTC
T ss_pred EECCCCcCCChHHHH---------------------HHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCc
Confidence 99999999852 111 24557789999999999997765 355555443
No 111
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.60 E-value=4.3e-15 Score=145.95 Aligned_cols=166 Identities=23% Similarity=0.261 Sum_probs=120.1
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCCCcCCCCCcccceeec
Q 012224 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (468)
Q Consensus 70 ~~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~L 149 (468)
.+++.|++++|.+.+..+ +..+++|++|++++|.+.+. +. +..+++|+.|++++|.+++..+ +..+++|+.|+|
T Consensus 155 ~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l 228 (347)
T 4fmz_A 155 TGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDI-SP-LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKI 228 (347)
T ss_dssp TTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCC-GG-GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEEC
T ss_pred CCCcEEEecCCCcCCchh--hccCCCCCEEEccCCccccc-cc-ccCCCccceeecccCCCCCCch--hhcCCcCCEEEc
Confidence 478888888888876543 78888888888888888754 33 7788888888888888885433 778888888888
Q ss_pred ccccCcccCChhccCCCCCcEEeccCCCCCccCCCCCCccccccccccccCCCCccC---ccCCCCCCEEEcccCcCccC
Q 012224 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG---LCHLSQLKVADFSYNFFVGS 226 (468)
Q Consensus 150 s~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~---~~~l~~L~~l~ls~N~l~g~ 226 (468)
++|.+++ +|. +..+++|++|++++|.+++ ++.. ....++..+++++|.+.+ +..+++|+.|++++|.+++.
T Consensus 229 ~~n~l~~-~~~-~~~l~~L~~L~l~~n~l~~-~~~~---~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~L~~n~l~~~ 302 (347)
T 4fmz_A 229 GNNKITD-LSP-LANLSQLTWLEIGTNQISD-INAV---KDLTKLKMLNVGSNQISDISVLNNLSQLNSLFLNNNQLGNE 302 (347)
T ss_dssp CSSCCCC-CGG-GTTCTTCCEEECCSSCCCC-CGGG---TTCTTCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCGG
T ss_pred cCCccCC-Ccc-hhcCCCCCEEECCCCccCC-ChhH---hcCCCcCEEEccCCccCCChhhcCCCCCCEEECcCCcCCCc
Confidence 8888884 444 7788888888888888874 3321 112456677778877765 34567788888888888877
Q ss_pred CCccccCC---CCCcccCCcCCCC
Q 012224 227 IPKCLEYL---PSTSFQGNCLQNK 247 (468)
Q Consensus 227 ip~~~~~l---~~~~~~~n~~~~~ 247 (468)
.|..+..+ ..+.+++|.+...
T Consensus 303 ~~~~l~~l~~L~~L~L~~n~l~~~ 326 (347)
T 4fmz_A 303 DMEVIGGLTNLTTLFLSQNHITDI 326 (347)
T ss_dssp GHHHHHTCTTCSEEECCSSSCCCC
T ss_pred ChhHhhccccCCEEEccCCccccc
Confidence 77665444 4456777765553
No 112
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.59 E-value=4e-15 Score=157.70 Aligned_cols=135 Identities=23% Similarity=0.289 Sum_probs=76.8
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCCEEEccCcccc-ccCChhhcCCCCCCEEEccCCCCCCCCCcCCCCCcccceeec
Q 012224 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLI-GIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (468)
Q Consensus 71 ~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~-g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~L 149 (468)
.++.++++.|.+.+..+..+..++.|++|+|++|.+. +.+|..|..+++|++|||++|++++..|..|.++++|+.|+|
T Consensus 446 ~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~L 525 (635)
T 4g8a_A 446 NLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNM 525 (635)
T ss_dssp TCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred ccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEEC
Confidence 3445555555555555555555555555555555432 234455555555555555555555555555555555555555
Q ss_pred ccccCcccCChhccCCCCCcEEeccCCCCCccCCCCCCccccccccccccCCCCccCccCC-CCCCEEEcccCcCccC
Q 012224 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHL-SQLKVADFSYNFFVGS 226 (468)
Q Consensus 150 s~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~~~~l-~~L~~l~ls~N~l~g~ 226 (468)
++|+|++..|..+..+++|++|+|++|++++..|.. +..+ ++|+.|++++|+|+..
T Consensus 526 s~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~---------------------l~~l~~~L~~L~L~~Np~~C~ 582 (635)
T 4g8a_A 526 SHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQE---------------------LQHFPSSLAFLNLTQNDFACT 582 (635)
T ss_dssp TTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSC---------------------TTCCCTTCCEEECTTCCBCCS
T ss_pred CCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHH---------------------HHhhhCcCCEEEeeCCCCccc
Confidence 555555555555555555555555555555444432 2234 5799999999999865
No 113
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.59 E-value=6e-15 Score=129.89 Aligned_cols=107 Identities=30% Similarity=0.324 Sum_probs=94.4
Q ss_pred EEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCCCcCCCCCcccceeeccccc
Q 012224 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNG 153 (468)
Q Consensus 74 ~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls~N~ 153 (468)
.|++++|.|+. +|..+ .++|++|+|++|.|++..|..|.++++|++|||++|+|++..|..|..+++|++|+|++|+
T Consensus 13 ~l~~s~n~l~~-ip~~~--~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~ 89 (170)
T 3g39_A 13 TVDCSGKSLAS-VPTGI--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQ 89 (170)
T ss_dssp EEECTTSCCSS-CCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCcCc-cCccC--CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCc
Confidence 56777888876 77766 3899999999999999889999999999999999999997666668999999999999999
Q ss_pred CcccCChhccCCCCCcEEeccCCCCCccCC
Q 012224 154 LTGRLPAELGNLISLEELHLDRNRLQGAVP 183 (468)
Q Consensus 154 l~g~~p~~l~~l~~L~~L~ls~N~l~g~ip 183 (468)
|++..|..+..+++|++|+|++|.++...+
T Consensus 90 l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 90 LKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred cCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 997666679999999999999999986543
No 114
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.59 E-value=3.3e-15 Score=131.09 Aligned_cols=130 Identities=22% Similarity=0.187 Sum_probs=108.7
Q ss_pred cCCCCCCEEEccCcccc-ccCChhhcCCCCCCEEEccCCCCCCCCCcCCCCCcccceeecccccCcccCChhccCCCCCc
Q 012224 91 GLLTYLQELILHGNNLI-GIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLE 169 (468)
Q Consensus 91 ~~l~~L~~L~Ls~N~l~-g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~ 169 (468)
...++|++|+|++|.++ +.+|..+..+++|++|+|++|.+++. ..+..+++|++|+|++|++++.+|..+..+++|+
T Consensus 21 ~~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 98 (168)
T 2ell_A 21 RTPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLT 98 (168)
T ss_dssp SCTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCC
T ss_pred CCcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCC
Confidence 34588999999999998 89999999999999999999999965 7899999999999999999988999998899999
Q ss_pred EEeccCCCCCccCCCCCCccccccccccccCCCCccCccCCCCCCEEEcccCcCccCCC---ccccCCC---CCcccCC
Q 012224 170 ELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIP---KCLEYLP---STSFQGN 242 (468)
Q Consensus 170 ~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~~~~l~~L~~l~ls~N~l~g~ip---~~~~~l~---~~~~~~n 242 (468)
+|++++|.+++. |.. ..+..+++|+.|++++|.+++..+ ..+..++ .+++.+|
T Consensus 99 ~L~Ls~N~l~~~-~~~-------------------~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n 157 (168)
T 2ell_A 99 HLNLSGNKLKDI-STL-------------------EPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDR 157 (168)
T ss_dssp EEECBSSSCCSS-GGG-------------------GGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEET
T ss_pred EEeccCCccCcc-hhH-------------------HHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCC
Confidence 999999999842 210 134567889999999999997665 3555544 4555565
No 115
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.59 E-value=5.8e-15 Score=139.57 Aligned_cols=144 Identities=24% Similarity=0.311 Sum_probs=109.3
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCCCcCCCCCcccceeec
Q 012224 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (468)
Q Consensus 70 ~~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~L 149 (468)
.+++.|++++|.++. ++ .+..+++|++|+|++|.+++..| +..+++|++|+|++|++++ +|.... ++|+.|+|
T Consensus 41 ~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~-l~~~~~--~~L~~L~L 113 (263)
T 1xeu_A 41 SGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKN-LNGIPS--ACLSRLFL 113 (263)
T ss_dssp TTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSC-CTTCCC--SSCCEEEC
T ss_pred CcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCCCccCC-cCcccc--CcccEEEc
Confidence 478899999999985 55 78899999999999999996544 8999999999999999985 564433 89999999
Q ss_pred ccccCcccCChhccCCCCCcEEeccCCCCCccCCCCCCccccccccccccCCCCccCc---cCCCCCCEEEcccCcCccC
Q 012224 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL---CHLSQLKVADFSYNFFVGS 226 (468)
Q Consensus 150 s~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~~---~~l~~L~~l~ls~N~l~g~ 226 (468)
++|++++ +| .+..+++|+.|++++|++++. |. .....++..+++++|+++++ ..+++|+.|++++|.+++.
T Consensus 114 ~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~~-~~---l~~l~~L~~L~L~~N~i~~~~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 114 DNNELRD-TD-SLIHLKNLEILSIRNNKLKSI-VM---LGFLSKLEVLDLHGNEITNTGGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp CSSCCSB-SG-GGTTCTTCCEEECTTSCCCBC-GG---GGGCTTCCEEECTTSCCCBCTTSTTCCCCCEEEEEEEEEECC
T ss_pred cCCccCC-Ch-hhcCcccccEEECCCCcCCCC-hH---HccCCCCCEEECCCCcCcchHHhccCCCCCEEeCCCCcccCC
Confidence 9999995 44 688999999999999999853 32 11123455556666665543 3455666666666666644
No 116
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.59 E-value=3.5e-15 Score=157.23 Aligned_cols=163 Identities=23% Similarity=0.318 Sum_probs=134.0
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCCCcCCCCCcccceeec
Q 012224 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (468)
Q Consensus 70 ~~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~L 149 (468)
.+++.|+|++|.+... + .+..+++|+.|+|++|.+++..| +..+++|+.|+|++|++++ +| .+..+++|+.|+|
T Consensus 43 ~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~L 116 (605)
T 1m9s_A 43 NSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSL 116 (605)
T ss_dssp TTCCCCBCTTCCCCCC-T-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEEC
T ss_pred CCCCEEECcCCCCCCC-h-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEe
Confidence 4788899999999863 3 68999999999999999997655 9999999999999999995 45 7999999999999
Q ss_pred ccccCcccCChhccCCCCCcEEeccCCCCCccCCCCCCccccccccccccCCCCccCc---cCCCCCCEEEcccCcCccC
Q 012224 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL---CHLSQLKVADFSYNFFVGS 226 (468)
Q Consensus 150 s~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~~---~~l~~L~~l~ls~N~l~g~ 226 (468)
++|.+++ + +.+..+++|+.|+|++|.+++. +.. ....++..+++++|.+.++ ..+++|+.|+|++|++++.
T Consensus 117 s~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l-~~l---~~l~~L~~L~Ls~N~l~~~~~l~~l~~L~~L~Ls~N~i~~l 190 (605)
T 1m9s_A 117 EHNGISD-I-NGLVHLPQLESLYLGNNKITDI-TVL---SRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISDL 190 (605)
T ss_dssp TTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC-GGG---GSCTTCSEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCBC
T ss_pred cCCCCCC-C-ccccCCCccCEEECCCCccCCc-hhh---cccCCCCEEECcCCcCCCchhhccCCCCCEEECcCCCCCCC
Confidence 9999995 4 4689999999999999999864 321 1225688899999998764 5678999999999999974
Q ss_pred CCcccc---CCCCCcccCCcCCC
Q 012224 227 IPKCLE---YLPSTSFQGNCLQN 246 (468)
Q Consensus 227 ip~~~~---~l~~~~~~~n~~~~ 246 (468)
| .+. +|..+.+++|.+..
T Consensus 191 -~-~l~~l~~L~~L~L~~N~l~~ 211 (605)
T 1m9s_A 191 -R-ALAGLKNLDVLELFSQECLN 211 (605)
T ss_dssp -G-GGTTCTTCSEEECCSEEEEC
T ss_pred -h-HHccCCCCCEEEccCCcCcC
Confidence 4 344 45556777775543
No 117
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.57 E-value=7.5e-15 Score=150.42 Aligned_cols=144 Identities=24% Similarity=0.365 Sum_probs=118.5
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCCCcCCCCCcccceeec
Q 012224 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (468)
Q Consensus 70 ~~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~L 149 (468)
.+++.|+|++|.+++..+ +..+++|++|+|++|.+++..| +..+++|+.|+|++|++++..| +..+++|+.|+|
T Consensus 243 ~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L 316 (466)
T 1o6v_A 243 TNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTL 316 (466)
T ss_dssp TTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEEC
T ss_pred CCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEEC
Confidence 467788888888877544 7888889999999998886544 8889999999999999986544 889999999999
Q ss_pred ccccCcccCChhccCCCCCcEEeccCCCCCccCCCCCCccccccccccccCCCCccCc---cCCCCCCEEEcccCcCcc
Q 012224 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL---CHLSQLKVADFSYNFFVG 225 (468)
Q Consensus 150 s~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~~---~~l~~L~~l~ls~N~l~g 225 (468)
++|++++..| +..+++|+.|++++|.+++. +... ...++..+++++|++++. ..+++|+.|++++|.+++
T Consensus 317 ~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~~l~---~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 317 YFNNISDISP--VSSLTKLQRLFFYNNKVSDV-SSLA---NLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp CSSCCSCCGG--GGGCTTCCEEECCSSCCCCC-GGGT---TCTTCCEEECCSSCCCBCGGGTTCTTCCEEECCCEEEEC
T ss_pred cCCcCCCchh--hccCccCCEeECCCCccCCc-hhhc---cCCCCCEEeCCCCccCccchhhcCCCCCEEeccCCcccC
Confidence 9999997665 78999999999999999865 3211 124677889999998774 567899999999999997
No 118
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.57 E-value=1.2e-14 Score=128.39 Aligned_cols=106 Identities=25% Similarity=0.256 Sum_probs=93.6
Q ss_pred EEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCCCcCCCCCcccceeecccc
Q 012224 73 LKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152 (468)
Q Consensus 73 ~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls~N 152 (468)
+.+++++|.|+ .+|..+. ++|++|+|++|.|++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 57899999995 5787764 89999999999999988999999999999999999999655555789999999999999
Q ss_pred cCcccCChhccCCCCCcEEeccCCCCCcc
Q 012224 153 GLTGRLPAELGNLISLEELHLDRNRLQGA 181 (468)
Q Consensus 153 ~l~g~~p~~l~~l~~L~~L~ls~N~l~g~ 181 (468)
+|++..+..+..+++|++|+|++|.+...
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~ 120 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCE 120 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTT
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcccc
Confidence 99965555699999999999999999843
No 119
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.57 E-value=8.1e-17 Score=160.96 Aligned_cols=89 Identities=20% Similarity=0.137 Sum_probs=41.3
Q ss_pred cCCCCCCEEEccCccccc----cCChhhcCCCCCCEEEccCCCCCCCCCcCCC----CC---------cccceeeccccc
Q 012224 91 GLLTYLQELILHGNNLIG----IIPKELGLLKRLKILDLGTNQLTGPIPPEIG----NL---------TGLVKINLQSNG 153 (468)
Q Consensus 91 ~~l~~L~~L~Ls~N~l~g----~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~----~l---------~~L~~L~Ls~N~ 153 (468)
..+++|++|+|++|.+++ .+|..+..+++|++|+|++|.+++..+..+. .+ ++|++|+|++|+
T Consensus 91 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~ 170 (386)
T 2ca6_A 91 LKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNR 170 (386)
T ss_dssp TTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSC
T ss_pred hhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCC
Confidence 445555555555555554 3444455555555555555555422222222 12 455555555555
Q ss_pred Cc-ccCC---hhccCCCCCcEEeccCCCCC
Q 012224 154 LT-GRLP---AELGNLISLEELHLDRNRLQ 179 (468)
Q Consensus 154 l~-g~~p---~~l~~l~~L~~L~ls~N~l~ 179 (468)
++ +.+| ..+..+++|+.|++++|.++
T Consensus 171 l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~ 200 (386)
T 2ca6_A 171 LENGSMKEWAKTFQSHRLLHTVKMVQNGIR 200 (386)
T ss_dssp CTGGGHHHHHHHHHHCTTCCEEECCSSCCC
T ss_pred CCcHHHHHHHHHHHhCCCcCEEECcCCCCC
Confidence 54 2333 23444445555555555444
No 120
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.57 E-value=1.1e-14 Score=143.06 Aligned_cols=166 Identities=22% Similarity=0.313 Sum_probs=125.9
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCCCcCCCCCcccceee
Q 012224 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (468)
Q Consensus 69 ~~~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ 148 (468)
..+++.|++++|.....++. +..+++|++|++++|.+.+..+ +..+++|+.|++++|.+++ ++. +..+++|+.|+
T Consensus 131 l~~L~~L~l~~n~~~~~~~~-~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~-~~~-~~~l~~L~~L~ 205 (347)
T 4fmz_A 131 LTKMYSLNLGANHNLSDLSP-LSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIED-ISP-LASLTSLHYFT 205 (347)
T ss_dssp CTTCCEEECTTCTTCCCCGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCC-CGG-GGGCTTCCEEE
T ss_pred CCceeEEECCCCCCcccccc-hhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCcccc-ccc-ccCCCccceee
Confidence 35788999999876665544 8889999999999999885543 8889999999999999884 444 88889999999
Q ss_pred cccccCcccCChhccCCCCCcEEeccCCCCCccCCCCCCccccccccccccCCCCccC---ccCCCCCCEEEcccCcCcc
Q 012224 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG---LCHLSQLKVADFSYNFFVG 225 (468)
Q Consensus 149 Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~---~~~l~~L~~l~ls~N~l~g 225 (468)
+++|.+++..+ +..+++|++|++++|.+++..+- ....++..+++++|.+.+ +..+++|+.|++++|.+++
T Consensus 206 l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~~----~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~l~~ 279 (347)
T 4fmz_A 206 AYVNQITDITP--VANMTRLNSLKIGNNKITDLSPL----ANLSQLTWLEIGTNQISDINAVKDLTKLKMLNVGSNQISD 279 (347)
T ss_dssp CCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGGG----TTCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCC
T ss_pred cccCCCCCCch--hhcCCcCCEEEccCCccCCCcch----hcCCCCCEEECCCCccCCChhHhcCCCcCEEEccCCccCC
Confidence 99999885443 78889999999999998854331 122467778888888765 4567889999999998886
Q ss_pred CCCc--cccCCCCCcccCCcCCC
Q 012224 226 SIPK--CLEYLPSTSFQGNCLQN 246 (468)
Q Consensus 226 ~ip~--~~~~l~~~~~~~n~~~~ 246 (468)
. |. .+.++..+.+++|.+..
T Consensus 280 ~-~~~~~l~~L~~L~L~~n~l~~ 301 (347)
T 4fmz_A 280 I-SVLNNLSQLNSLFLNNNQLGN 301 (347)
T ss_dssp C-GGGGGCTTCSEEECCSSCCCG
T ss_pred C-hhhcCCCCCCEEECcCCcCCC
Confidence 4 32 23456667778886544
No 121
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=99.56 E-value=6.6e-15 Score=143.93 Aligned_cols=88 Identities=20% Similarity=0.270 Sum_probs=70.6
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEec
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~ 442 (468)
+.||+|+||.||+|+.. +|+.||||++..... .....+.|.+|+++|++++|||||++++++.+.+ ..+||||||
T Consensus 30 ~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~--~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~--~~yiVmEy~ 105 (350)
T 4b9d_A 30 QKIGEGSFGKAILVKSTEDGRQYVIKEINISRM--SSKEREESRREVAVLANMKHPNIVQYRESFEENG--SLYIVMDYC 105 (350)
T ss_dssp EEC------CEEEEEETTTCCEEEEEEEECTTS--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEEECC
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEEehHHC--CHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECC--EEEEEEeCC
Confidence 67999999999999875 799999999964332 2334678999999999999999999999999877 899999999
Q ss_pred CCCChhhhhhcCC
Q 012224 443 SNGTLYEHLHCKS 455 (468)
Q Consensus 443 ~~GsL~~~L~~~~ 455 (468)
++|+|.++|+.++
T Consensus 106 ~gg~L~~~i~~~~ 118 (350)
T 4b9d_A 106 EGGDLFKRINAQK 118 (350)
T ss_dssp TTCBHHHHHHHTT
T ss_pred CCCcHHHHHHHcC
Confidence 9999999997543
No 122
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.55 E-value=1.7e-16 Score=155.34 Aligned_cols=170 Identities=19% Similarity=0.160 Sum_probs=132.1
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCEEEccCcccccc-CChhhcCCCCCCEEEccCCCCCCCCCcCCCCCcccceee
Q 012224 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGI-IPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (468)
Q Consensus 70 ~~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~-ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ 148 (468)
.+++.|++++|.+.+..+. +..+++|++|+|++|.+++. +|..+..+++|++|+|++|++++.+|..++.+++|++|+
T Consensus 70 ~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~ 148 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 148 (336)
T ss_dssp TTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEE
T ss_pred ccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEE
Confidence 4688888888888886655 66789999999999999876 888899999999999999999888888899999999999
Q ss_pred cccc-cCcc-cCChhccCCCCCcEEeccCC-CCCcc-CCCCCCccccc-cccccccCCCC--ccC------ccCCCCCCE
Q 012224 149 LQSN-GLTG-RLPAELGNLISLEELHLDRN-RLQGA-VPAGSNSGYTA-NIHGMYASSAN--LTG------LCHLSQLKV 215 (468)
Q Consensus 149 Ls~N-~l~g-~~p~~l~~l~~L~~L~ls~N-~l~g~-ip~~~~~~~~~-~l~~~~ls~n~--l~~------~~~l~~L~~ 215 (468)
|++| .+++ .+|..+..+++|++|++++| .+++. ++.... ... ++..+++++|. ++. +..+++|+.
T Consensus 149 L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~--~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~ 226 (336)
T 2ast_B 149 LSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVA--HVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVH 226 (336)
T ss_dssp CTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHH--HSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSE
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHH--hcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCE
Confidence 9999 6876 37777888999999999999 88753 332110 113 57778888884 331 245788999
Q ss_pred EEcccCc-CccCCCccccCC---CCCcccCC
Q 012224 216 ADFSYNF-FVGSIPKCLEYL---PSTSFQGN 242 (468)
Q Consensus 216 l~ls~N~-l~g~ip~~~~~l---~~~~~~~n 242 (468)
|++++|. +++..+..+..+ ..+++++|
T Consensus 227 L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~ 257 (336)
T 2ast_B 227 LDLSDSVMLKNDCFQEFFQLNYLQHLSLSRC 257 (336)
T ss_dssp EECTTCTTCCGGGGGGGGGCTTCCEEECTTC
T ss_pred EeCCCCCcCCHHHHHHHhCCCCCCEeeCCCC
Confidence 9999998 777777666544 44556666
No 123
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=99.55 E-value=7e-15 Score=140.43 Aligned_cols=89 Identities=24% Similarity=0.192 Sum_probs=73.3
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcC--CCCcEEEEEE
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRES--SPFTRMLVFD 440 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~--~~~~~~lv~e 440 (468)
+.||+|+||.||+|... ++..||||++.... ......+.|.+|++++++++|||||+++++|.+. .....+||||
T Consensus 32 ~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~--~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvmE 109 (290)
T 3fpq_A 32 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRK--LTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTE 109 (290)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEGGG--SCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEEE
T ss_pred eEEecCcCcEEEEEEECCCCeEEEEEEEchhh--CCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEEe
Confidence 56999999999999886 78999999985432 2233467899999999999999999999998642 1125789999
Q ss_pred ecCCCChhhhhhcC
Q 012224 441 YASNGTLYEHLHCK 454 (468)
Q Consensus 441 y~~~GsL~~~L~~~ 454 (468)
||++|+|.++|+..
T Consensus 110 y~~gg~L~~~l~~~ 123 (290)
T 3fpq_A 110 LMTSGTLKTYLKRF 123 (290)
T ss_dssp CCCSCBHHHHHHHH
T ss_pred CCCCCCHHHHHHhc
Confidence 99999999999753
No 124
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.54 E-value=1.2e-14 Score=137.26 Aligned_cols=160 Identities=22% Similarity=0.272 Sum_probs=125.8
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCCCcCCCCCcccceeecc
Q 012224 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (468)
Q Consensus 71 ~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls 150 (468)
+++.++++++.+++.. .+..+++|++|++++|.++ .+| .+..+++|++|+|++|++++ +|. +..+++|+.|+|+
T Consensus 20 ~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~-~~~-l~~l~~L~~L~L~ 93 (263)
T 1xeu_A 20 NAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISD-LSP-LKDLTKLEELSVN 93 (263)
T ss_dssp HHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCSSCCEEECC
T ss_pred HHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCC-Chh-hccCCCCCEEECC
Confidence 3455677788877643 5788999999999999998 566 78999999999999999995 454 9999999999999
Q ss_pred cccCcccCChhccCCCCCcEEeccCCCCCccCCCCCCccccccccccccCCCCccCc---cCCCCCCEEEcccCcCccCC
Q 012224 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL---CHLSQLKVADFSYNFFVGSI 227 (468)
Q Consensus 151 ~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~~---~~l~~L~~l~ls~N~l~g~i 227 (468)
+|++++ +|.... ++|+.|++++|.+++ +|.. ....++..+++++|+++++ ..+++|+.|++++|++++.
T Consensus 94 ~N~l~~-l~~~~~--~~L~~L~L~~N~l~~-~~~l---~~l~~L~~L~Ls~N~i~~~~~l~~l~~L~~L~L~~N~i~~~- 165 (263)
T 1xeu_A 94 RNRLKN-LNGIPS--ACLSRLFLDNNELRD-TDSL---IHLKNLEILSIRNNKLKSIVMLGFLSKLEVLDLHGNEITNT- 165 (263)
T ss_dssp SSCCSC-CTTCCC--SSCCEEECCSSCCSB-SGGG---TTCTTCCEEECTTSCCCBCGGGGGCTTCCEEECTTSCCCBC-
T ss_pred CCccCC-cCcccc--CcccEEEccCCccCC-Chhh---cCcccccEEECCCCcCCCChHHccCCCCCEEECCCCcCcch-
Confidence 999995 665433 899999999999986 4431 1224677889999988764 5678999999999999876
Q ss_pred Ccccc---CCCCCcccCCcCC
Q 012224 228 PKCLE---YLPSTSFQGNCLQ 245 (468)
Q Consensus 228 p~~~~---~l~~~~~~~n~~~ 245 (468)
..+. ++..+++++|.+.
T Consensus 166 -~~l~~l~~L~~L~l~~N~~~ 185 (263)
T 1xeu_A 166 -GGLTRLKKVNWIDLTGQKCV 185 (263)
T ss_dssp -TTSTTCCCCCEEEEEEEEEE
T ss_pred -HHhccCCCCCEEeCCCCccc
Confidence 3444 4445567777443
No 125
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.54 E-value=5.8e-16 Score=153.45 Aligned_cols=177 Identities=20% Similarity=0.197 Sum_probs=117.5
Q ss_pred CCEEEEEecCCCCcccCC----ccccCCC-CCCEEEccCccccccCChhhcCC-----CCCCEEEccCCCCCCCCCcCCC
Q 012224 70 DRVLKINISGSSLKGFLA----PELGLLT-YLQELILHGNNLIGIIPKELGLL-----KRLKILDLGTNQLTGPIPPEIG 139 (468)
Q Consensus 70 ~~v~~L~L~~n~l~g~~p----~~l~~l~-~L~~L~Ls~N~l~g~ip~~~~~l-----~~L~~L~Ls~N~l~g~iP~~~~ 139 (468)
.+++.|+|++|.+++..+ ..+..++ +|++|+|++|.+++..+..+..+ ++|++|||++|++++..+..+.
T Consensus 22 ~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~ 101 (362)
T 3goz_A 22 HGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELV 101 (362)
T ss_dssp TTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHH
T ss_pred CCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHH
Confidence 358888888888877655 5667777 78888888888887777777665 8888888888888876665444
Q ss_pred CC-----cccceeecccccCcccCChhcc----C-CCCCcEEeccCCCCCccCCCCCCc---cccccccccccCCCCccC
Q 012224 140 NL-----TGLVKINLQSNGLTGRLPAELG----N-LISLEELHLDRNRLQGAVPAGSNS---GYTANIHGMYASSANLTG 206 (468)
Q Consensus 140 ~l-----~~L~~L~Ls~N~l~g~~p~~l~----~-l~~L~~L~ls~N~l~g~ip~~~~~---~~~~~l~~~~ls~n~l~~ 206 (468)
.. ++|++|+|++|.+++..+..+. . .++|++|+|++|.+++..+..... ....++..+++++|++++
T Consensus 102 ~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~ 181 (362)
T 3goz_A 102 KTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLAS 181 (362)
T ss_dssp HHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGG
T ss_pred HHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCch
Confidence 43 7888888888888766554433 3 358888888888887433221100 011256677778877764
Q ss_pred cc---------CC-CCCCEEEcccCcCccC----CCccc----cCCCCCcccCCcCCC
Q 012224 207 LC---------HL-SQLKVADFSYNFFVGS----IPKCL----EYLPSTSFQGNCLQN 246 (468)
Q Consensus 207 ~~---------~l-~~L~~l~ls~N~l~g~----ip~~~----~~l~~~~~~~n~~~~ 246 (468)
.. .. ++|+.||+++|.++.. ++..+ .++..+++++|.+..
T Consensus 182 ~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~ 239 (362)
T 3goz_A 182 KNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHG 239 (362)
T ss_dssp SCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCC
T ss_pred hhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCc
Confidence 32 23 4788888888887763 33333 256666777775544
No 126
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.54 E-value=2.4e-16 Score=157.57 Aligned_cols=177 Identities=22% Similarity=0.273 Sum_probs=137.8
Q ss_pred CCEEEEEecCCCCcccC----CccccCCCCCCEEEccCc---cccccCChhh-------cCCCCCCEEEccCCCCCC---
Q 012224 70 DRVLKINISGSSLKGFL----APELGLLTYLQELILHGN---NLIGIIPKEL-------GLLKRLKILDLGTNQLTG--- 132 (468)
Q Consensus 70 ~~v~~L~L~~n~l~g~~----p~~l~~l~~L~~L~Ls~N---~l~g~ip~~~-------~~l~~L~~L~Ls~N~l~g--- 132 (468)
.+++.|+|++|.+++.. +..+..+++|++|+|++| ++++.+|..+ ..+++|++|+|++|++++
T Consensus 32 ~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~ 111 (386)
T 2ca6_A 32 DSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQ 111 (386)
T ss_dssp SCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTH
T ss_pred CCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHH
Confidence 47999999999998763 445789999999999995 6677788766 789999999999999997
Q ss_pred -CCCcCCCCCcccceeecccccCcccCChhcc----CC---------CCCcEEeccCCCCC-ccCCCCCC-ccccccccc
Q 012224 133 -PIPPEIGNLTGLVKINLQSNGLTGRLPAELG----NL---------ISLEELHLDRNRLQ-GAVPAGSN-SGYTANIHG 196 (468)
Q Consensus 133 -~iP~~~~~l~~L~~L~Ls~N~l~g~~p~~l~----~l---------~~L~~L~ls~N~l~-g~ip~~~~-~~~~~~l~~ 196 (468)
.+|..+..+++|++|+|++|.+++..+..+. .+ ++|++|++++|+++ +.+|.... .....++..
T Consensus 112 ~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~ 191 (386)
T 2ca6_A 112 EPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHT 191 (386)
T ss_dssp HHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCE
T ss_pred HHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCE
Confidence 4788899999999999999999854444443 34 89999999999997 44442100 001135778
Q ss_pred cccCCCCcc----------CccCCCCCCEEEcccCcCc----cCCCcccc---CCCCCcccCCcCCC
Q 012224 197 MYASSANLT----------GLCHLSQLKVADFSYNFFV----GSIPKCLE---YLPSTSFQGNCLQN 246 (468)
Q Consensus 197 ~~ls~n~l~----------~~~~l~~L~~l~ls~N~l~----g~ip~~~~---~l~~~~~~~n~~~~ 246 (468)
+++++|.+. .+..+++|+.|+|++|.++ +.+|..+. ++..+.+++|.+..
T Consensus 192 L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~ 258 (386)
T 2ca6_A 192 VKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSA 258 (386)
T ss_dssp EECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCH
T ss_pred EECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCch
Confidence 899999987 5667889999999999997 66776654 45566778885543
No 127
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.54 E-value=1.1e-14 Score=131.33 Aligned_cols=130 Identities=18% Similarity=0.228 Sum_probs=111.5
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCCCcCCCCCcccceeec
Q 012224 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (468)
Q Consensus 70 ~~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~L 149 (468)
.+++.|++++|.++ .++.+..+++|++|+|++|.+++..|..+..+++|++|+|++|++++..|..++.+++|++|+|
T Consensus 66 ~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L 143 (197)
T 4ezg_A 66 HNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDL 143 (197)
T ss_dssp TTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEEC
T ss_pred CCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEc
Confidence 47999999999665 3468999999999999999999988999999999999999999999888999999999999999
Q ss_pred ccccCcccCChhccCCCCCcEEeccCCCCCccCCCCCCccccccccccccCCCCccCccCCCCCCEEEcccCcCcc
Q 012224 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVG 225 (468)
Q Consensus 150 s~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~~~~l~~L~~l~ls~N~l~g 225 (468)
++|.+.+.+| .+..+++|+.|++++|.+++ ++ .+..+++|+.|++++|++.+
T Consensus 144 ~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~-~~----------------------~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 144 SYNGAITDIM-PLKTLPELKSLNIQFDGVHD-YR----------------------GIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp CSCTBCCCCG-GGGGCSSCCEEECTTBCCCC-CT----------------------TGGGCSSCCEEEECBC----
T ss_pred cCCCCccccH-hhcCCCCCCEEECCCCCCcC-hH----------------------HhccCCCCCEEEeeCcccCC
Confidence 9999444777 78999999999999999984 33 13456789999999999864
No 128
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.54 E-value=6.1e-15 Score=130.54 Aligned_cols=131 Identities=23% Similarity=0.265 Sum_probs=106.9
Q ss_pred CCEEEEEecCCCCcccCCccccCCC-CCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCCCcC-CCCCccccee
Q 012224 70 DRVLKINISGSSLKGFLAPELGLLT-YLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPE-IGNLTGLVKI 147 (468)
Q Consensus 70 ~~v~~L~L~~n~l~g~~p~~l~~l~-~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~-~~~l~~L~~L 147 (468)
.+++.|+|++|.++. +|. +..+. +|++|+|++|.+++. ..+..+++|++|+|++|++++ +|+. +..+++|++|
T Consensus 19 ~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L 93 (176)
T 1a9n_A 19 VRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICR-IGEGLDQALPDLTEL 93 (176)
T ss_dssp TSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCE-ECSCHHHHCTTCCEE
T ss_pred CCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccc-cCcchhhcCCCCCEE
Confidence 478999999999995 454 55555 999999999999975 578999999999999999995 5544 4899999999
Q ss_pred ecccccCcccCCh--hccCCCCCcEEeccCCCCCccCCCCCCccccccccccccCCCCccCccCCCCCCEEEcccCcCc
Q 012224 148 NLQSNGLTGRLPA--ELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFV 224 (468)
Q Consensus 148 ~Ls~N~l~g~~p~--~l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~~~~l~~L~~l~ls~N~l~ 224 (468)
+|++|+++ .+|. .+..+++|+.|++++|.++ .+|.... ..+..+++|+.||+++|...
T Consensus 94 ~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~-----------------~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 94 ILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRL-----------------YVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp ECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHH-----------------HHHHHCTTCSEETTEECCHH
T ss_pred ECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHH-----------------HHHHHCCccceeCCCcCCHH
Confidence 99999996 6777 8899999999999999997 4453100 01335678999999988775
No 129
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.54 E-value=6.3e-15 Score=142.19 Aligned_cols=85 Identities=24% Similarity=0.320 Sum_probs=67.5
Q ss_pred hHhccCCceEEEEEEECCCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCC--CcEEEEEEe
Q 012224 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP--FTRMLVFDY 441 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~--~~~~lv~ey 441 (468)
+.||+|+||.||+|++ +|+.||||++.... .....+..|+..+.+++|||||+++|+|.+.+. ...+|||||
T Consensus 9 ~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~-----~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey 82 (303)
T 3hmm_A 9 ESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE-----ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDY 82 (303)
T ss_dssp EEEEECSSSEEEEEEE-TTEEEEEEEECGGG-----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEEC
T ss_pred EEEeeCCCeEEEEEEE-CCEEEEEEEECccc-----hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecC
Confidence 6799999999999998 58899999984321 112234456666778999999999999986531 147899999
Q ss_pred cCCCChhhhhhcC
Q 012224 442 ASNGTLYEHLHCK 454 (468)
Q Consensus 442 ~~~GsL~~~L~~~ 454 (468)
|++|+|.++|+..
T Consensus 83 ~~~gsL~~~l~~~ 95 (303)
T 3hmm_A 83 HEHGSLFDYLNRY 95 (303)
T ss_dssp CTTCBHHHHHHHC
T ss_pred CCCCcHHHHHHhC
Confidence 9999999999864
No 130
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.53 E-value=7.7e-14 Score=147.24 Aligned_cols=160 Identities=30% Similarity=0.319 Sum_probs=74.0
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCCCcCCCCCcccceeecc
Q 012224 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (468)
Q Consensus 71 ~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls 150 (468)
+++.|+|++|.|++ +|. .+++|++|+|++|.+++ +|. .+++|+.|+|++|+++ .+|.. +++|++|+|+
T Consensus 82 ~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~-~lp~~---l~~L~~L~Ls 149 (622)
T 3g06_A 82 ELRTLEVSGNQLTS-LPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLT-SLPVL---PPGLQELSVS 149 (622)
T ss_dssp TCCEEEECSCCCSC-CCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCS-CCCCC---CTTCCEEECC
T ss_pred CCCEEEcCCCcCCc-CCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCC-cCCCC---CCCCCEEECc
Confidence 45555555555543 333 34455555555555543 232 3344444444444444 23432 2555566666
Q ss_pred cccCcccCChhcc---C--------------CCCCcEEeccCCCCCccCCCCCCc---------------cccccccccc
Q 012224 151 SNGLTGRLPAELG---N--------------LISLEELHLDRNRLQGAVPAGSNS---------------GYTANIHGMY 198 (468)
Q Consensus 151 ~N~l~g~~p~~l~---~--------------l~~L~~L~ls~N~l~g~ip~~~~~---------------~~~~~l~~~~ 198 (468)
+|++++ +|..+. . +++|+.|++++|.+++ +|..... ....++..++
T Consensus 150 ~N~l~~-l~~~~~~L~~L~L~~N~l~~l~~~~~~L~~L~Ls~N~l~~-l~~~~~~L~~L~L~~N~l~~l~~~~~~L~~L~ 227 (622)
T 3g06_A 150 DNQLAS-LPALPSELCKLWAYNNQLTSLPMLPSGLQELSVSDNQLAS-LPTLPSELYKLWAYNNRLTSLPALPSGLKELI 227 (622)
T ss_dssp SSCCSC-CCCCCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCSSCCCCCTTCCEEE
T ss_pred CCcCCC-cCCccCCCCEEECCCCCCCCCcccCCCCcEEECCCCCCCC-CCCccchhhEEECcCCcccccCCCCCCCCEEE
Confidence 665553 222221 1 1556666666666653 3331100 0002234445
Q ss_pred cCCCCccCcc-CCCCCCEEEcccCcCccCCCccccCCCCCcccCCcCC
Q 012224 199 ASSANLTGLC-HLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQ 245 (468)
Q Consensus 199 ls~n~l~~~~-~l~~L~~l~ls~N~l~g~ip~~~~~l~~~~~~~n~~~ 245 (468)
+++|.++++. .+++|+.|++++|+++ .+|..+.++..+++++|.+.
T Consensus 228 Ls~N~L~~lp~~l~~L~~L~Ls~N~L~-~lp~~~~~L~~L~Ls~N~L~ 274 (622)
T 3g06_A 228 VSGNRLTSLPVLPSELKELMVSGNRLT-SLPMLPSGLLSLSVYRNQLT 274 (622)
T ss_dssp CCSSCCSCCCCCCTTCCEEECCSSCCS-CCCCCCTTCCEEECCSSCCC
T ss_pred ccCCccCcCCCCCCcCcEEECCCCCCC-cCCcccccCcEEeCCCCCCC
Confidence 5555544432 2345555555555555 34444445555555555444
No 131
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.53 E-value=9.2e-16 Score=150.02 Aligned_cols=171 Identities=20% Similarity=0.196 Sum_probs=125.2
Q ss_pred CCEEEEEecCCCCccc-CCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCC-CCCCC-CCcCCCCCcccce
Q 012224 70 DRVLKINISGSSLKGF-LAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTN-QLTGP-IPPEIGNLTGLVK 146 (468)
Q Consensus 70 ~~v~~L~L~~n~l~g~-~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N-~l~g~-iP~~~~~l~~L~~ 146 (468)
.+++.|+|++|.+++. ++..+..+++|++|+|++|.+++..|..+..+++|++|+|++| .+++. +|..+..+++|++
T Consensus 93 ~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~ 172 (336)
T 2ast_B 93 FRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDE 172 (336)
T ss_dssp BCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCE
T ss_pred CCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCE
Confidence 5788999999998876 7888888999999999999998888888889999999999998 67753 6767788889999
Q ss_pred eecccc-cCccc-CChhccCCC-CCcEEeccCC--CCC-ccCCCCCCccccccccccccCCCC-ccC-----ccCCCCCC
Q 012224 147 INLQSN-GLTGR-LPAELGNLI-SLEELHLDRN--RLQ-GAVPAGSNSGYTANIHGMYASSAN-LTG-----LCHLSQLK 214 (468)
Q Consensus 147 L~Ls~N-~l~g~-~p~~l~~l~-~L~~L~ls~N--~l~-g~ip~~~~~~~~~~l~~~~ls~n~-l~~-----~~~l~~L~ 214 (468)
|+|++| .+++. +|..+..++ +|++|++++| .++ +.+|.... ...++..+++++|. +++ +..+++|+
T Consensus 173 L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~--~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~ 250 (336)
T 2ast_B 173 LNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVR--RCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQ 250 (336)
T ss_dssp EECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHH--HCTTCSEEECTTCTTCCGGGGGGGGGCTTCC
T ss_pred EcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHh--hCCCCCEEeCCCCCcCCHHHHHHHhCCCCCC
Confidence 999999 88864 677788888 8999999988 454 33333110 12356677777777 432 45678888
Q ss_pred EEEcccCc-CccCCCccc---cCCCCCcccCC
Q 012224 215 VADFSYNF-FVGSIPKCL---EYLPSTSFQGN 242 (468)
Q Consensus 215 ~l~ls~N~-l~g~ip~~~---~~l~~~~~~~n 242 (468)
.|++++|. ++......+ .++..+++++|
T Consensus 251 ~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~ 282 (336)
T 2ast_B 251 HLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 282 (336)
T ss_dssp EEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred EeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc
Confidence 88888885 222211123 34455566666
No 132
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.53 E-value=6.2e-16 Score=153.21 Aligned_cols=158 Identities=25% Similarity=0.239 Sum_probs=80.0
Q ss_pred CEEEEEecCCCCcccCCccccCC-----CCCCEEEccCccccccCChhhcC----C-CCCCEEEccCCCCCCCCCcCCC-
Q 012224 71 RVLKINISGSSLKGFLAPELGLL-----TYLQELILHGNNLIGIIPKELGL----L-KRLKILDLGTNQLTGPIPPEIG- 139 (468)
Q Consensus 71 ~v~~L~L~~n~l~g~~p~~l~~l-----~~L~~L~Ls~N~l~g~ip~~~~~----l-~~L~~L~Ls~N~l~g~iP~~~~- 139 (468)
+++.|+|++|.+++..+..+..+ ++|++|+|++|.+++..+..+.. + ++|++|||++|++++..+..+.
T Consensus 52 ~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~ 131 (362)
T 3goz_A 52 SVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQ 131 (362)
T ss_dssp TCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHH
T ss_pred ceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHH
Confidence 56666666666665545444443 56666666666666555443332 2 5666666666666544443322
Q ss_pred ---C-CcccceeecccccCccc----CChhccCCC-CCcEEeccCCCCCccCCCCCCcc---ccccccccccCCCCccC-
Q 012224 140 ---N-LTGLVKINLQSNGLTGR----LPAELGNLI-SLEELHLDRNRLQGAVPAGSNSG---YTANIHGMYASSANLTG- 206 (468)
Q Consensus 140 ---~-l~~L~~L~Ls~N~l~g~----~p~~l~~l~-~L~~L~ls~N~l~g~ip~~~~~~---~~~~l~~~~ls~n~l~~- 206 (468)
. .++|++|+|++|.+++. ++..+..++ +|++|+|++|++++..+...... ...++..+++++|.+..
T Consensus 132 ~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~ 211 (362)
T 3goz_A 132 AFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLK 211 (362)
T ss_dssp HHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGS
T ss_pred HHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChh
Confidence 2 24566666666666532 223333443 66666666666654433211100 00245555666666554
Q ss_pred ----cc----C-CCCCCEEEcccCcCccCCC
Q 012224 207 ----LC----H-LSQLKVADFSYNFFVGSIP 228 (468)
Q Consensus 207 ----~~----~-l~~L~~l~ls~N~l~g~ip 228 (468)
+. . .++|+.||+++|.+++..+
T Consensus 212 ~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~ 242 (362)
T 3goz_A 212 SYAELAYIFSSIPNHVVSLNLCLNCLHGPSL 242 (362)
T ss_dssp CHHHHHHHHHHSCTTCCEEECCSSCCCCCCH
T ss_pred HHHHHHHHHhcCCCCceEEECcCCCCCcHHH
Confidence 11 1 2356666666666655433
No 133
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.53 E-value=2e-17 Score=149.63 Aligned_cols=134 Identities=22% Similarity=0.302 Sum_probs=111.7
Q ss_pred CEEEEEecCCCCcccCCc------cccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCCCcCCCCCccc
Q 012224 71 RVLKINISGSSLKGFLAP------ELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGL 144 (468)
Q Consensus 71 ~v~~L~L~~n~l~g~~p~------~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L 144 (468)
+|+.++++.+.++|.+|. .++.+++|++|+|++|.+++ +| .+..+++|++|+|++|+++ .+|..+..+++|
T Consensus 19 ~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L 95 (198)
T 1ds9_A 19 SVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTL 95 (198)
T ss_dssp CCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHC
T ss_pred cccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcC
Confidence 556667777777777776 89999999999999999996 78 8999999999999999998 788888888999
Q ss_pred ceeecccccCcccCChhccCCCCCcEEeccCCCCCccCCCCCCccccccccccccCCCCccCccCCCCCCEEEcccCcCc
Q 012224 145 VKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFV 224 (468)
Q Consensus 145 ~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~~~~l~~L~~l~ls~N~l~ 224 (468)
+.|+|++|++++ +| .+..+++|++|++++|.+++. |. +..+..+++|+.|++++|.++
T Consensus 96 ~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~-~~-------------------~~~l~~l~~L~~L~l~~N~l~ 153 (198)
T 1ds9_A 96 EELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNW-GE-------------------IDKLAALDKLEDLLLAGNPLY 153 (198)
T ss_dssp SEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCH-HH-------------------HHHHTTTTTCSEEEECSCHHH
T ss_pred CEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCch-hH-------------------HHHHhcCCCCCEEEecCCccc
Confidence 999999999995 56 688899999999999998732 11 012445778999999999998
Q ss_pred cCCCc
Q 012224 225 GSIPK 229 (468)
Q Consensus 225 g~ip~ 229 (468)
+.+|.
T Consensus 154 ~~~~~ 158 (198)
T 1ds9_A 154 NDYKE 158 (198)
T ss_dssp HHHHT
T ss_pred ccccc
Confidence 88765
No 134
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=99.52 E-value=2.6e-14 Score=137.46 Aligned_cols=89 Identities=13% Similarity=0.200 Sum_probs=71.8
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCC----------
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP---------- 432 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~---------- 432 (468)
+.||+|+||.||+|+.. +|+.||||++..... ....+.|.+|+++|++++|||||++++++.+.+.
T Consensus 11 ~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~---~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~~ 87 (299)
T 4g31_A 11 QCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNR---ELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPK 87 (299)
T ss_dssp EEEEECC--EEEEEEETTTCCEEEEEEEEECSS---HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC----------C
T ss_pred eEEecCCCeEEEEEEECCCCCEEEEEEEeccCC---HHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccCCC
Confidence 78999999999999876 799999999864432 2345679999999999999999999999865431
Q ss_pred CcEEEEEEecCCCChhhhhhcCC
Q 012224 433 FTRMLVFDYASNGTLYEHLHCKS 455 (468)
Q Consensus 433 ~~~~lv~ey~~~GsL~~~L~~~~ 455 (468)
...++|||||++|+|.++++.+.
T Consensus 88 ~~l~ivmE~~~gg~L~~~l~~~~ 110 (299)
T 4g31_A 88 VYLYIQMQLCRKENLKDWMNGRC 110 (299)
T ss_dssp EEEEEEEECCCSCCHHHHHHTCC
T ss_pred cEEEEEEecCCCCcHHHHHHhcC
Confidence 12589999999999999998653
No 135
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=99.52 E-value=9.4e-15 Score=140.49 Aligned_cols=88 Identities=22% Similarity=0.179 Sum_probs=75.2
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEec
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~ 442 (468)
+.||+|+||+||+|+.. +|+.||||++..... ......+.+.+|+++|++++|||||++++++.+.+ ..++||||+
T Consensus 38 ~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~-~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~--~~yivmEy~ 114 (311)
T 4aw0_A 38 KILGEGSFSTVVLARELATSREYAIKILEKRHI-IKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDE--KLYFGLSYA 114 (311)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHH-HHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEEECCC
T ss_pred EEEecccCeEEEEEEECCCCCEEEEEEEEHHHC-CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC--EEEEEEecC
Confidence 78999999999999875 799999999953321 11223567999999999999999999999999877 899999999
Q ss_pred CCCChhhhhhcC
Q 012224 443 SNGTLYEHLHCK 454 (468)
Q Consensus 443 ~~GsL~~~L~~~ 454 (468)
++|+|.++|+..
T Consensus 115 ~gG~L~~~i~~~ 126 (311)
T 4aw0_A 115 KNGELLKYIRKI 126 (311)
T ss_dssp TTEEHHHHHHHH
T ss_pred CCCCHHHHHHHc
Confidence 999999999754
No 136
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.51 E-value=8.8e-14 Score=122.37 Aligned_cols=109 Identities=23% Similarity=0.247 Sum_probs=94.0
Q ss_pred CCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCCCcCCCCCcccceeecccccCcccCChhccCCCCCcEEeccC
Q 012224 96 LQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDR 175 (468)
Q Consensus 96 L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~ 175 (468)
.+.+++++|.++ .+|..+. ++|++|+|++|+|++..|..|..+++|++|+|++|+|++..|..+..+++|++|+|++
T Consensus 11 ~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 578999999999 5887664 8999999999999988899999999999999999999976666789999999999999
Q ss_pred CCCCccCCCCCCccccccccccccCCCCccCccCCCCCCEEEcccCcCccCCC
Q 012224 176 NRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIP 228 (468)
Q Consensus 176 N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~~~~l~~L~~l~ls~N~l~g~ip 228 (468)
|++++..+. .+..+++|+.|+|++|.+++..+
T Consensus 88 N~l~~~~~~---------------------~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 88 NQLKSIPRG---------------------AFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp SCCCCCCTT---------------------TTTTCTTCCEEECCSSCBCTTBG
T ss_pred CccCEeCHH---------------------HhcCCCCCCEEEeCCCCCCCCch
Confidence 999954332 13457789999999999987654
No 137
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=99.51 E-value=1.5e-14 Score=141.08 Aligned_cols=85 Identities=18% Similarity=0.267 Sum_probs=74.0
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEec
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~ 442 (468)
+.||+|+||.||+|+.. +|+.||||++...... ..+.+.+|+++|++++|||||++++++.+.+ ..+||||||
T Consensus 80 ~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~----~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~--~~~ivmEy~ 153 (346)
T 4fih_A 80 IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ----RRELLFNEVVIMRDYQHENVVEMYNSYLVGD--ELWVVMEFL 153 (346)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCS----SGGGGHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEECCC
T ss_pred EEeecCcCeEEEEEEECCCCCEEEEEEEecCchh----HHHHHHHHHHHHHhCCCCCCCcEEEEEEECC--EEEEEEeCC
Confidence 56999999999999886 7999999999644322 2346889999999999999999999999877 899999999
Q ss_pred CCCChhhhhhcC
Q 012224 443 SNGTLYEHLHCK 454 (468)
Q Consensus 443 ~~GsL~~~L~~~ 454 (468)
++|+|.++++..
T Consensus 154 ~gg~L~~~l~~~ 165 (346)
T 4fih_A 154 EGGALTDIVTHT 165 (346)
T ss_dssp TTEEHHHHHHHS
T ss_pred CCCcHHHHHHcC
Confidence 999999999753
No 138
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.51 E-value=4.5e-14 Score=138.81 Aligned_cols=108 Identities=25% Similarity=0.260 Sum_probs=94.5
Q ss_pred CCccceeeCCCCCCEEEEEecCC-CCcccCCccccCCCCCCEEEccC-ccccccCChhhcCCCCCCEEEccCCCCCCCCC
Q 012224 58 CHWTGIACSDARDRVLKINISGS-SLKGFLAPELGLLTYLQELILHG-NNLIGIIPKELGLLKRLKILDLGTNQLTGPIP 135 (468)
Q Consensus 58 c~w~gv~C~~~~~~v~~L~L~~n-~l~g~~p~~l~~l~~L~~L~Ls~-N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP 135 (468)
|.|..|.|. ++ +|++ +|. |..+++|++|+|++ |.|++..|..|.+|++|+.|||++|+|++..|
T Consensus 8 C~~~~v~~~------------~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 73 (347)
T 2ifg_A 8 HGSSGLRCT------------RDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAP 73 (347)
T ss_dssp SSSSCEECC------------SSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECT
T ss_pred ccCCEEEcC------------CCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCH
Confidence 778777776 34 6775 788 99999999999996 99998888899999999999999999999888
Q ss_pred cCCCCCcccceeecccccCcccCChhccCCCCCcEEeccCCCCCc
Q 012224 136 PEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQG 180 (468)
Q Consensus 136 ~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g 180 (468)
..|.++++|+.|+|++|+|++..|..+..++ |+.|+|++|.|..
T Consensus 74 ~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 74 DAFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp TGGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred HHhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCccC
Confidence 8999999999999999999965555555555 9999999999974
No 139
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.49 E-value=6.1e-14 Score=146.79 Aligned_cols=58 Identities=29% Similarity=0.433 Sum_probs=31.3
Q ss_pred CCEEEccCCCCCCCCCcCCCCCcccceeecccccCcccCChhccCCCCCcEEeccCCCCCc
Q 012224 120 LKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQG 180 (468)
Q Consensus 120 L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g 180 (468)
|+.|+|++|+|++ +|. ++.+++|+.|+|++|+|+ .+|..++.+++|+.|+|++|.+++
T Consensus 443 L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~ 500 (567)
T 1dce_A 443 VRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN 500 (567)
T ss_dssp CSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC
T ss_pred ceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC
Confidence 5555555555553 443 555555555555555555 555555555555555555555553
No 140
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=99.49 E-value=2.6e-14 Score=142.99 Aligned_cols=85 Identities=18% Similarity=0.267 Sum_probs=74.3
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEec
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~ 442 (468)
+.||+|+||.||+|... +|+.||||++...... ..+.+.+|+++|++++|||||++++++.+.+ ..+||||||
T Consensus 157 ~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~----~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~--~~~iVmEy~ 230 (423)
T 4fie_A 157 IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ----RRELLFNEVVIMRDYQHENVVEMYNSYLVGD--ELWVVMEFL 230 (423)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEESTTCS----SGGGHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEEECC
T ss_pred eEeccCcCcEEEEEEECCCCCEEEEEEEeccchh----HHHHHHHHHHHHHhCCCCCCCceEEEEEECC--EEEEEEeCC
Confidence 67999999999999886 7999999999644322 2346889999999999999999999999877 899999999
Q ss_pred CCCChhhhhhcC
Q 012224 443 SNGTLYEHLHCK 454 (468)
Q Consensus 443 ~~GsL~~~L~~~ 454 (468)
++|+|.++++..
T Consensus 231 ~gG~L~~~i~~~ 242 (423)
T 4fie_A 231 EGGALTDIVTHT 242 (423)
T ss_dssp TTEEHHHHHHHS
T ss_pred CCCcHHHHHhcc
Confidence 999999999753
No 141
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.48 E-value=2.2e-13 Score=120.25 Aligned_cols=108 Identities=23% Similarity=0.262 Sum_probs=92.4
Q ss_pred CCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCCCcCCCCCcccceeecccccCcccCChhccCCCCCcEEeccC
Q 012224 96 LQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDR 175 (468)
Q Consensus 96 L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~ 175 (468)
-+.+++++|.++ .+|..+. ++|++|+|++|+|++..|..|..+++|++|+|++|+|++..+..+..+++|++|+|++
T Consensus 14 ~~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 14 QTLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SSEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CcEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 378999999996 7888775 8999999999999988899999999999999999999965555678999999999999
Q ss_pred CCCCccCCCCCCccccccccccccCCCCccCccCCCCCCEEEcccCcCccCC
Q 012224 176 NRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSI 227 (468)
Q Consensus 176 N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~~~~l~~L~~l~ls~N~l~g~i 227 (468)
|++++ +|.. .+..+++|+.|+|++|.+....
T Consensus 91 N~l~~-l~~~--------------------~~~~l~~L~~L~L~~N~~~c~~ 121 (174)
T 2r9u_A 91 NHLKS-IPRG--------------------AFDNLKSLTHIYLYNNPWDCEC 121 (174)
T ss_dssp SCCCC-CCTT--------------------TTTTCTTCSEEECCSSCBCTTB
T ss_pred Cccce-eCHH--------------------HhccccCCCEEEeCCCCccccc
Confidence 99994 4442 1345778999999999998543
No 142
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=99.45 E-value=5.4e-14 Score=136.77 Aligned_cols=80 Identities=18% Similarity=0.157 Sum_probs=70.2
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEec
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~ 442 (468)
+.||+|+||.||+|+.. +|+.||||++.... .+.+|++++++++|||||++++++.+.+ ..+||||||
T Consensus 64 ~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~---------~~~~E~~il~~l~HpnIV~l~~~~~~~~--~~~ivmEy~ 132 (336)
T 4g3f_A 64 PRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEV---------FRVEELVACAGLSSPRIVPLYGAVREGP--WVNIFMELL 132 (336)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEETTT---------CCTHHHHTTTTCCCTTBCCEEEEEEETT--EEEEEECCC
T ss_pred cEeccCCCeEEEEEEECCCCCEEEEEEECHHH---------hHHHHHHHHHhCCCCCCCcEEEEEEECC--EEEEEEecc
Confidence 67999999999999876 79999999985321 1246999999999999999999999877 899999999
Q ss_pred CCCChhhhhhcC
Q 012224 443 SNGTLYEHLHCK 454 (468)
Q Consensus 443 ~~GsL~~~L~~~ 454 (468)
++|+|.++|+..
T Consensus 133 ~gg~L~~~l~~~ 144 (336)
T 4g3f_A 133 EGGSLGQLIKQM 144 (336)
T ss_dssp TTCBHHHHHHHH
T ss_pred CCCcHHHHHHHc
Confidence 999999999754
No 143
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=99.43 E-value=1.9e-13 Score=129.33 Aligned_cols=87 Identities=17% Similarity=0.239 Sum_probs=69.3
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEec
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~ 442 (468)
+.||+|+||+||+|... +|+.||||++...... .....+.|.+|++++++++|||||++++++.+.+ ..++||||+
T Consensus 19 ~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~--~~~ivmEy~ 95 (275)
T 3hyh_A 19 KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLA-KSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKD--EIIMVIEYA 95 (275)
T ss_dssp EEEEC---CCEEEEECTTTCCEEEEEEEECC-------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEEECC
T ss_pred EEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcC-CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECC--EEEEEEeCC
Confidence 78999999999999875 7999999998543211 1223567999999999999999999999999877 899999999
Q ss_pred CCCChhhhhhcC
Q 012224 443 SNGTLYEHLHCK 454 (468)
Q Consensus 443 ~~GsL~~~L~~~ 454 (468)
+|+|.++|..+
T Consensus 96 -~g~L~~~l~~~ 106 (275)
T 3hyh_A 96 -GNELFDYIVQR 106 (275)
T ss_dssp -CEEHHHHHHHS
T ss_pred -CCCHHHHHHHc
Confidence 68999999764
No 144
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=99.43 E-value=1.5e-13 Score=135.00 Aligned_cols=88 Identities=24% Similarity=0.244 Sum_probs=71.3
Q ss_pred hHhccCCceEEEEEEECC------CCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCC-CCccceeeEEEcCCCCcEE
Q 012224 364 NIIGSSPDSLVYKGTMKG------GPEIAVISLCIKEEHWTGYLELYFQREVADLARINH-ENTGKLLGYCRESSPFTRM 436 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~~------g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H-~nlv~l~g~~~~~~~~~~~ 436 (468)
+.||+|+||.||+|.+.. ++.||||++.... .....++|.+|+++|.+++| +|||+++|+|.+.+ ...+
T Consensus 70 ~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~---~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~-~~~~ 145 (353)
T 4ase_A 70 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA---THSEHRALMSELKILIHIGHHLNVVNLLGACTKPG-GPLM 145 (353)
T ss_dssp EEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTC---CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTT-SCCE
T ss_pred eEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEcccc---ChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecC-CEEE
Confidence 789999999999998642 3579999984322 22345789999999999965 89999999997643 1579
Q ss_pred EEEEecCCCChhhhhhcCC
Q 012224 437 LVFDYASNGTLYEHLHCKS 455 (468)
Q Consensus 437 lv~ey~~~GsL~~~L~~~~ 455 (468)
+|||||++|+|.++|+...
T Consensus 146 iV~Ey~~~G~L~~~L~~~~ 164 (353)
T 4ase_A 146 VIVEFCKFGNLSTYLRSKR 164 (353)
T ss_dssp EEEECCTTEEHHHHHHHTG
T ss_pred EEEEcCCCCCHHHHHHhcc
Confidence 9999999999999998643
No 145
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.41 E-value=1.8e-13 Score=120.93 Aligned_cols=106 Identities=20% Similarity=0.244 Sum_probs=95.6
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCCCc--CCCCCccccee
Q 012224 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPP--EIGNLTGLVKI 147 (468)
Q Consensus 70 ~~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~--~~~~l~~L~~L 147 (468)
.+++.|+|++|.+++. +.++.+++|++|+|++|.+++..|..+..+++|++|+|++|+++ .+|. .+..+++|+.|
T Consensus 42 ~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L 118 (176)
T 1a9n_A 42 DQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYL 118 (176)
T ss_dssp TCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEE
T ss_pred CCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEE
Confidence 3799999999999985 78999999999999999999765566699999999999999996 7887 88999999999
Q ss_pred ecccccCcccCChh----ccCCCCCcEEeccCCCCC
Q 012224 148 NLQSNGLTGRLPAE----LGNLISLEELHLDRNRLQ 179 (468)
Q Consensus 148 ~Ls~N~l~g~~p~~----l~~l~~L~~L~ls~N~l~ 179 (468)
+|++|.++ .+|.. +..+++|+.||++.|...
T Consensus 119 ~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 119 CILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp ECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred EecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 99999998 67775 899999999999999865
No 146
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=99.39 E-value=4.9e-14 Score=135.36 Aligned_cols=87 Identities=17% Similarity=0.123 Sum_probs=67.3
Q ss_pred hHhccCCceEEEEEEEC----CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEE
Q 012224 364 NIIGSSPDSLVYKGTMK----GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~----~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ 439 (468)
+.||+|+||+||+|+.. .++.||||++...... ......|.+|+++|++++|||||++++++.+.+ ..++||
T Consensus 30 ~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~--~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~--~~~ivm 105 (304)
T 3ubd_A 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLK--VRDRVRTKMERDILVEVNHPFIVKLHYAFQTEG--KLYLIL 105 (304)
T ss_dssp EEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEE--EEECC------CCCCCCCCTTEECEEEEEEETT--EEEEEE
T ss_pred EEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcC--hHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECC--EEEEEE
Confidence 78999999999999752 4778999998543211 112346889999999999999999999999877 899999
Q ss_pred EecCCCChhhhhhcC
Q 012224 440 DYASNGTLYEHLHCK 454 (468)
Q Consensus 440 ey~~~GsL~~~L~~~ 454 (468)
|||++|+|.++|+..
T Consensus 106 Ey~~gg~L~~~l~~~ 120 (304)
T 3ubd_A 106 DFLRGGDLFTRLSKE 120 (304)
T ss_dssp CCCTTCEEHHHHHHH
T ss_pred EcCCCCCHHHHHHhc
Confidence 999999999999754
No 147
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.38 E-value=5.1e-13 Score=139.91 Aligned_cols=89 Identities=13% Similarity=0.263 Sum_probs=76.8
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEec
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~ 442 (468)
+.||+|+||.||+|... +|+.||+|.+.... ....+.+.+|+++|++++|||||++++++.+.. ..++|||||
T Consensus 163 ~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~----~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~--~~~iv~E~~ 236 (573)
T 3uto_A 163 EELGTGAFGVVHRVTERATGNNFAAKFVMTPH----ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDN--EMVMIYEFM 236 (573)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECCS----HHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSS--EEEEEEECC
T ss_pred EEEeeccCeEEEEEEECCCCCEEEEEEEeccc----hhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECC--EEEEEEeec
Confidence 78999999999999876 79999999985432 223567899999999999999999999999877 899999999
Q ss_pred CCCChhhhhhcCCCCc
Q 012224 443 SNGTLYEHLHCKSSSL 458 (468)
Q Consensus 443 ~~GsL~~~L~~~~~~~ 458 (468)
++|+|.++|..+...+
T Consensus 237 ~gg~L~~~i~~~~~~l 252 (573)
T 3uto_A 237 SGGELFEKVADEHNKM 252 (573)
T ss_dssp CCCBHHHHHTCTTSCE
T ss_pred CCCcHHHHHHHhCCCC
Confidence 9999999997665443
No 148
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=99.37 E-value=1.4e-12 Score=125.56 Aligned_cols=105 Identities=31% Similarity=0.487 Sum_probs=88.8
Q ss_pred ccccCHHHHHHHHHhhH--------hHhccCCceEEEEEEECCCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCC
Q 012224 347 VVRFSRQELEVACEDFS--------NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHE 418 (468)
Q Consensus 347 ~~~~~~~el~~at~~~~--------~~lg~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~ 418 (468)
...|++.++..++.+|+ +.||+|+||.||+|.. +++.||||++............+.|.+|++++.+++|+
T Consensus 12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 90 (307)
T 2nru_A 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHE 90 (307)
T ss_dssp CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCT
T ss_pred CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCC
Confidence 45689999999999996 4699999999999987 68899999985432222233467899999999999999
Q ss_pred CccceeeEEEcCCCCcEEEEEEecCCCChhhhhhcC
Q 012224 419 NTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHCK 454 (468)
Q Consensus 419 nlv~l~g~~~~~~~~~~~lv~ey~~~GsL~~~L~~~ 454 (468)
||+++++++...+ ..++||||+++|+|.+++...
T Consensus 91 ~i~~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~ 124 (307)
T 2nru_A 91 NLVELLGFSSDGD--DLCLVYVYMPNGSLLDRLSCL 124 (307)
T ss_dssp TBCCEEEEECSSS--SCEEEEECCTTCBHHHHHHTG
T ss_pred CeEEEEEEEecCC--ceEEEEEecCCCcHHHHHHhc
Confidence 9999999998876 789999999999999999743
No 149
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.34 E-value=7.8e-15 Score=132.47 Aligned_cols=110 Identities=22% Similarity=0.229 Sum_probs=98.7
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCCCcCCCCCcccceeec
Q 012224 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (468)
Q Consensus 70 ~~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~L 149 (468)
.+++.|+|++|.+++ +| .+..+++|++|+|++|.++ .+|..+..+++|++|+|++|++++ +| .+..+++|++|+|
T Consensus 48 ~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l 122 (198)
T 1ds9_A 48 KACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLYM 122 (198)
T ss_dssp TTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEE
T ss_pred CCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEEC
Confidence 579999999999998 67 8999999999999999999 789888889999999999999996 66 6889999999999
Q ss_pred ccccCcccCC-hhccCCCCCcEEeccCCCCCccCCC
Q 012224 150 QSNGLTGRLP-AELGNLISLEELHLDRNRLQGAVPA 184 (468)
Q Consensus 150 s~N~l~g~~p-~~l~~l~~L~~L~ls~N~l~g~ip~ 184 (468)
++|++++.-+ ..+..+++|++|++++|.+++.+|.
T Consensus 123 ~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~ 158 (198)
T 1ds9_A 123 SNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKE 158 (198)
T ss_dssp SEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHT
T ss_pred CCCcCCchhHHHHHhcCCCCCEEEecCCcccccccc
Confidence 9999994222 4789999999999999999887665
No 150
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=99.33 E-value=4.3e-13 Score=130.40 Aligned_cols=105 Identities=36% Similarity=0.550 Sum_probs=88.4
Q ss_pred cccccCHHHHHHHHHhhH--hHhccCCceEEEEEEECCCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccce
Q 012224 346 DVVRFSRQELEVACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKL 423 (468)
Q Consensus 346 ~~~~~~~~el~~at~~~~--~~lg~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l 423 (468)
....|+++++..++++|. +.||+|+||.||+|...+|+.||||++...... .....|.+|++++.+++|+||+++
T Consensus 16 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~ 92 (326)
T 3uim_A 16 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQ---GGELQFQTEVEMISMAVHRNLLRL 92 (326)
T ss_dssp CCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC--------CCCHHHHHHHGGGTCCCTTBCCC
T ss_pred ccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCc---hHHHHHHHHHHHHHhccCCCccce
Confidence 355788999999999886 899999999999999888999999998543211 122368999999999999999999
Q ss_pred eeEEEcCCCCcEEEEEEecCCCChhhhhhcCC
Q 012224 424 LGYCRESSPFTRMLVFDYASNGTLYEHLHCKS 455 (468)
Q Consensus 424 ~g~~~~~~~~~~~lv~ey~~~GsL~~~L~~~~ 455 (468)
+++|.... ..++||||+++|+|.++++...
T Consensus 93 ~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~ 122 (326)
T 3uim_A 93 RGFCMTPT--ERLLVYPYMANGSVASCLRERP 122 (326)
T ss_dssp CEEECCSS--CCEEEEECCTTCBHHHHHHCCS
T ss_pred EEEEecCC--ceEEEEEeccCCCHHHHHHhcc
Confidence 99998876 7899999999999999998654
No 151
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.33 E-value=1.4e-14 Score=147.76 Aligned_cols=174 Identities=20% Similarity=0.188 Sum_probs=95.2
Q ss_pred CEEEEEecCCCCcc----cCCccccCCCCCCEEEccCccccccCChhh-cCCC----CCCEEEccCCCCCC----CCCcC
Q 012224 71 RVLKINISGSSLKG----FLAPELGLLTYLQELILHGNNLIGIIPKEL-GLLK----RLKILDLGTNQLTG----PIPPE 137 (468)
Q Consensus 71 ~v~~L~L~~n~l~g----~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~-~~l~----~L~~L~Ls~N~l~g----~iP~~ 137 (468)
+++.|+|++|.+++ .++..+..+++|++|+|++|.++...+..+ ..++ +|++|+|++|+++. .+|..
T Consensus 29 ~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~ 108 (461)
T 1z7x_W 29 QCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSST 108 (461)
T ss_dssp TCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHHH
T ss_pred CccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHHHHHHH
Confidence 56666666666663 245556666667777777666665433333 2344 56677777776662 44666
Q ss_pred CCCCcccceeecccccCcccCChhcc-----CCCCCcEEeccCCCCCccCCCCCCc--cccccccccccCCCCccCc---
Q 012224 138 IGNLTGLVKINLQSNGLTGRLPAELG-----NLISLEELHLDRNRLQGAVPAGSNS--GYTANIHGMYASSANLTGL--- 207 (468)
Q Consensus 138 ~~~l~~L~~L~Ls~N~l~g~~p~~l~-----~l~~L~~L~ls~N~l~g~ip~~~~~--~~~~~l~~~~ls~n~l~~~--- 207 (468)
+..+++|++|+|++|.+++..+..+. ..++|++|++++|.+++..+..... ....++..+++++|.+...
T Consensus 109 l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~ 188 (461)
T 1z7x_W 109 LRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVR 188 (461)
T ss_dssp TTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHH
T ss_pred HccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHH
Confidence 66666777777777666543333222 2345677777776665432110000 0012455566666665431
Q ss_pred --c-----CCCCCCEEEcccCcCccC----CCccc---cCCCCCcccCCcC
Q 012224 208 --C-----HLSQLKVADFSYNFFVGS----IPKCL---EYLPSTSFQGNCL 244 (468)
Q Consensus 208 --~-----~l~~L~~l~ls~N~l~g~----ip~~~---~~l~~~~~~~n~~ 244 (468)
. ..++|+.|++++|.++.. +|..+ .++..+++++|.+
T Consensus 189 ~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l 239 (461)
T 1z7x_W 189 VLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKL 239 (461)
T ss_dssp HHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBC
T ss_pred HHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcC
Confidence 1 234677777777777653 34433 3455556666643
No 152
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=99.33 E-value=3.1e-12 Score=124.30 Aligned_cols=101 Identities=14% Similarity=0.171 Sum_probs=85.0
Q ss_pred cccCHHHHHHHHHhh----------H--hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhc
Q 012224 348 VRFSRQELEVACEDF----------S--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLAR 414 (468)
Q Consensus 348 ~~~~~~el~~at~~~----------~--~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~ 414 (468)
..++++++.++++.. . +.||+|+||.||+|... +|+.||||++..... ...+.|.+|++++.+
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~----~~~~~~~~E~~~l~~ 98 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQ----QRRELLFNEVVIMRD 98 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC----CSHHHHHHHHHHHTT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccch----hHHHHHHHHHHHHHh
Confidence 468899999988652 2 57999999999999987 799999999854332 235678999999999
Q ss_pred CCCCCccceeeEEEcCCCCcEEEEEEecCCCChhhhhhcC
Q 012224 415 INHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHCK 454 (468)
Q Consensus 415 l~H~nlv~l~g~~~~~~~~~~~lv~ey~~~GsL~~~L~~~ 454 (468)
++|+||++++++|...+ ..++||||+++|+|.+++...
T Consensus 99 l~h~niv~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~ 136 (321)
T 2c30_A 99 YQHFNVVEMYKSYLVGE--ELWVLMEFLQGGALTDIVSQV 136 (321)
T ss_dssp CCCTTBCCEEEEEEETT--EEEEEECCCCSCBHHHHHTTC
T ss_pred CCCCCcceEEEEEEECC--EEEEEEecCCCCCHHHHHHhc
Confidence 99999999999999877 899999999999999998653
No 153
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.33 E-value=2.5e-14 Score=145.94 Aligned_cols=175 Identities=19% Similarity=0.163 Sum_probs=126.7
Q ss_pred CCEEEEEecCCCCccc----CCccccCCCCCCEEEccCccccccC-----ChhhcCCCCCCEEEccCCCCCCC----CCc
Q 012224 70 DRVLKINISGSSLKGF----LAPELGLLTYLQELILHGNNLIGII-----PKELGLLKRLKILDLGTNQLTGP----IPP 136 (468)
Q Consensus 70 ~~v~~L~L~~n~l~g~----~p~~l~~l~~L~~L~Ls~N~l~g~i-----p~~~~~l~~L~~L~Ls~N~l~g~----iP~ 136 (468)
.+++.|+|++|.+++. ++..+..+++|++|+|++|.+++.- +..+..+++|++|+|++|++++. +|.
T Consensus 199 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~ 278 (461)
T 1z7x_W 199 CQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCR 278 (461)
T ss_dssp CCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHH
T ss_pred CCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHH
Confidence 4789999999999874 5777888899999999999887642 22233688999999999998854 677
Q ss_pred CCCCCcccceeecccccCcccCChhccC-----CCCCcEEeccCCCCCccC----CCCCCccccccccccccCCCCccCc
Q 012224 137 EIGNLTGLVKINLQSNGLTGRLPAELGN-----LISLEELHLDRNRLQGAV----PAGSNSGYTANIHGMYASSANLTGL 207 (468)
Q Consensus 137 ~~~~l~~L~~L~Ls~N~l~g~~p~~l~~-----l~~L~~L~ls~N~l~g~i----p~~~~~~~~~~l~~~~ls~n~l~~~ 207 (468)
.+..+++|++|+|++|.+++..+..+.. .++|++|++++|.+++.. |... ....++..+++++|.+.+.
T Consensus 279 ~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l--~~~~~L~~L~Ls~n~i~~~ 356 (461)
T 1z7x_W 279 VLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVL--AQNRFLLELQISNNRLEDA 356 (461)
T ss_dssp HHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHH--HHCSSCCEEECCSSBCHHH
T ss_pred HHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHH--hhCCCccEEEccCCccccc
Confidence 7778899999999999887654444432 368999999999887542 2110 0113567778888877542
Q ss_pred -----c-----CCCCCCEEEcccCcCcc----CCCccc---cCCCCCcccCCcCCC
Q 012224 208 -----C-----HLSQLKVADFSYNFFVG----SIPKCL---EYLPSTSFQGNCLQN 246 (468)
Q Consensus 208 -----~-----~l~~L~~l~ls~N~l~g----~ip~~~---~~l~~~~~~~n~~~~ 246 (468)
. ..++|+.|++++|.+++ .+|..+ .++..+++++|.+..
T Consensus 357 ~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~ 412 (461)
T 1z7x_W 357 GVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGD 412 (461)
T ss_dssp HHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCH
T ss_pred cHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCH
Confidence 1 15689999999999886 677654 456667788885543
No 154
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.33 E-value=3.6e-12 Score=125.12 Aligned_cols=106 Identities=21% Similarity=0.130 Sum_probs=88.9
Q ss_pred CEEEccCc-cccccCChhhcCCCCCCEEEccC-CCCCCCCCcCCCCCcccceeecccccCcccCChhccCCCCCcEEecc
Q 012224 97 QELILHGN-NLIGIIPKELGLLKRLKILDLGT-NQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLD 174 (468)
Q Consensus 97 ~~L~Ls~N-~l~g~ip~~~~~l~~L~~L~Ls~-N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls 174 (468)
..++++++ .++ .+|. |..+++|+.|+|++ |+|++..|..|..+++|+.|+|++|+|++..|..|.++++|+.|+|+
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 35789998 898 5888 99999999999996 99998777899999999999999999999999999999999999999
Q ss_pred CCCCCccCCCCCCccccccccccccCCCCccCccCCCCCCEEEcccCcCccC
Q 012224 175 RNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGS 226 (468)
Q Consensus 175 ~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~~~~l~~L~~l~ls~N~l~g~ 226 (468)
+|+|++ +|..... .++ |+.|+|++|.|...
T Consensus 89 ~N~l~~-~~~~~~~--------------------~~~-L~~l~l~~N~~~c~ 118 (347)
T 2ifg_A 89 FNALES-LSWKTVQ--------------------GLS-LQELVLSGNPLHCS 118 (347)
T ss_dssp SSCCSC-CCSTTTC--------------------SCC-CCEEECCSSCCCCC
T ss_pred CCccce-eCHHHcc--------------------cCC-ceEEEeeCCCccCC
Confidence 999994 5543211 122 77777777777643
No 155
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=99.31 E-value=3.9e-12 Score=122.78 Aligned_cols=90 Identities=19% Similarity=0.205 Sum_probs=77.2
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEec
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~ 442 (468)
+.||+|+||.||+|... +|..||+|++... .....+.|.+|++++.+++|+||++++++|.+.+ ..++||||+
T Consensus 16 ~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~----~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~e~~ 89 (310)
T 3s95_A 16 EVLGKGCFGQAIKVTHRETGEVMVMKELIRF----DEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDK--RLNFITEYI 89 (310)
T ss_dssp EEEECCSSEEEEEEEETTTCCEEEEEEESCC----CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT--EEEEEEECC
T ss_pred ceecCCCCEEEEEEEECCCCcEEEEEEeccC----CHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCC--eeEEEEEec
Confidence 68999999999999986 7899999988432 2234678999999999999999999999999876 899999999
Q ss_pred CCCChhhhhhcCCCCcc
Q 012224 443 SNGTLYEHLHCKSSSLY 459 (468)
Q Consensus 443 ~~GsL~~~L~~~~~~~~ 459 (468)
++|+|.++++.....++
T Consensus 90 ~~~~L~~~l~~~~~~~~ 106 (310)
T 3s95_A 90 KGGTLRGIIKSMDSQYP 106 (310)
T ss_dssp TTCBHHHHHHHCCTTSC
T ss_pred CCCcHHHHHHhccCCCC
Confidence 99999999987554443
No 156
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=99.30 E-value=1.6e-12 Score=129.22 Aligned_cols=93 Identities=24% Similarity=0.331 Sum_probs=77.1
Q ss_pred hHhccCCceEEEEEEEC----CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEE
Q 012224 364 NIIGSSPDSLVYKGTMK----GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~----~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ 439 (468)
+.||+|+||.||+|+.. ++..||||++.... .....++|.+|++++++++|+||++++++|.+.. ..++||
T Consensus 51 ~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~lv~ 125 (373)
T 2qol_A 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY---TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSK--PVMIVT 125 (373)
T ss_dssp EEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS--SCEEEE
T ss_pred eEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc---CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCC--ceEEEE
Confidence 68999999999999875 57789999985322 2234678999999999999999999999998876 789999
Q ss_pred EecCCCChhhhhhcCCCCcccc
Q 012224 440 DYASNGTLYEHLHCKSSSLYII 461 (468)
Q Consensus 440 ey~~~GsL~~~L~~~~~~~~~~ 461 (468)
||+++|+|.++++.....+...
T Consensus 126 e~~~~~sL~~~l~~~~~~~~~~ 147 (373)
T 2qol_A 126 EYMENGSLDSFLRKHDAQFTVI 147 (373)
T ss_dssp ECCTTCBHHHHHHTTTTCSCHH
T ss_pred eCCCCCcHHHHHHhCCCCCCHH
Confidence 9999999999998765554443
No 157
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=99.30 E-value=3.7e-12 Score=127.17 Aligned_cols=88 Identities=17% Similarity=0.170 Sum_probs=71.4
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCC----CCcEEEE
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS----PFTRMLV 438 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~----~~~~~lv 438 (468)
+.||+|+||.||+|... +|+.||||++..... .....+.+.+|+++|++++|||||++++++.... ....+||
T Consensus 60 ~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~--~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~~iv 137 (398)
T 4b99_A 60 ETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFD--VVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVV 137 (398)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEETTTTS--SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCEEEE
T ss_pred EEEecccCeEEEEEEECCCCCEEEEEEECcccc--chHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEEEEE
Confidence 67999999999999875 799999999843221 2234567899999999999999999999886431 1268999
Q ss_pred EEecCCCChhhhhhcC
Q 012224 439 FDYASNGTLYEHLHCK 454 (468)
Q Consensus 439 ~ey~~~GsL~~~L~~~ 454 (468)
||||+ |+|.++|..+
T Consensus 138 mE~~~-g~L~~~i~~~ 152 (398)
T 4b99_A 138 LDLME-SDLHQIIHSS 152 (398)
T ss_dssp EECCS-EEHHHHHTSS
T ss_pred EeCCC-CCHHHHHHhc
Confidence 99996 7899999764
No 158
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=99.30 E-value=4.7e-13 Score=129.97 Aligned_cols=96 Identities=28% Similarity=0.480 Sum_probs=79.7
Q ss_pred HHHHHHHhhH--hHhccCCceEEEEEEECCCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCC
Q 012224 354 ELEVACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS 431 (468)
Q Consensus 354 el~~at~~~~--~~lg~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~ 431 (468)
++..++++|. +.||+|+||.||+|+..+|..||||++..... ...+.|.+|++++++++|+||++++++|...+
T Consensus 33 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 108 (321)
T 2qkw_B 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESS----QGIEEFETEIETLSFCRHPHLVSLIGFCDERN 108 (321)
T ss_dssp CCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCS----SHHHHHHHHHHGGGSCCCTTBCCEEEECCCTT
T ss_pred HHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccCh----HHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC
Confidence 3334445554 78999999999999988899999998754322 24568999999999999999999999998776
Q ss_pred CCcEEEEEEecCCCChhhhhhcCC
Q 012224 432 PFTRMLVFDYASNGTLYEHLHCKS 455 (468)
Q Consensus 432 ~~~~~lv~ey~~~GsL~~~L~~~~ 455 (468)
..++||||+++|+|.++++...
T Consensus 109 --~~~lv~e~~~~~~L~~~l~~~~ 130 (321)
T 2qkw_B 109 --EMILIYKYMENGNLKRHLYGSD 130 (321)
T ss_dssp --CCEEEEECCTTCBTGGGSSSSC
T ss_pred --eEEEEEEcCCCCcHHHHHhccC
Confidence 7899999999999999997543
No 159
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.30 E-value=4e-12 Score=119.99 Aligned_cols=89 Identities=24% Similarity=0.315 Sum_probs=76.6
Q ss_pred hHhccCCceEEEEEEECCCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEecC
Q 012224 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~~ 443 (468)
+.||+|+||.||+|...++..||||++..... ..++|.+|++++.+++|+||+++++++.+.. ..++||||++
T Consensus 16 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~~ 88 (269)
T 4hcu_A 16 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-----SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQA--PICLVFEFME 88 (269)
T ss_dssp EEEEECSSCEEEEEEETTTEEEEEEEECTTSB-----CHHHHHHHHHHHHTCCCTTBCCEEEEECSSS--SEEEEEECCT
T ss_pred heecCCCccEEEEEEecCCCeEEEEEeccccc-----CHHHHHHHHHHHHhCCCCCEeeEEEEEecCC--ceEEEEEeCC
Confidence 67999999999999998888999999853322 2467999999999999999999999998876 7899999999
Q ss_pred CCChhhhhhcCCCCcc
Q 012224 444 NGTLYEHLHCKSSSLY 459 (468)
Q Consensus 444 ~GsL~~~L~~~~~~~~ 459 (468)
+|+|.++++.....+.
T Consensus 89 ~~~L~~~l~~~~~~~~ 104 (269)
T 4hcu_A 89 HGCLSDYLRTQRGLFA 104 (269)
T ss_dssp TCBHHHHHHTTTTCCC
T ss_pred CCcHHHHHHhcCcccC
Confidence 9999999987654433
No 160
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=99.28 E-value=4.8e-12 Score=123.20 Aligned_cols=93 Identities=25% Similarity=0.334 Sum_probs=76.5
Q ss_pred hHhccCCceEEEEEEEC----CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEE
Q 012224 364 NIIGSSPDSLVYKGTMK----GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~----~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ 439 (468)
+.||+|+||.||+|... .+..||||++.... .....+.|.+|++++.+++|+||++++++|.+.. ..++||
T Consensus 55 ~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~ 129 (325)
T 3kul_A 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY---TERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGR--LAMIVT 129 (325)
T ss_dssp EEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGG--CCEEEE
T ss_pred eEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCC---CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC--ccEEEe
Confidence 67999999999999985 34459999985321 2234678999999999999999999999998776 789999
Q ss_pred EecCCCChhhhhhcCCCCcccc
Q 012224 440 DYASNGTLYEHLHCKSSSLYII 461 (468)
Q Consensus 440 ey~~~GsL~~~L~~~~~~~~~~ 461 (468)
||+++|+|.++++.....+...
T Consensus 130 e~~~~~~L~~~l~~~~~~~~~~ 151 (325)
T 3kul_A 130 EYMENGSLDTFLRTHDGQFTIM 151 (325)
T ss_dssp ECCTTCBHHHHHHTTTTCSCHH
T ss_pred eCCCCCcHHHHHHhcccCCCHH
Confidence 9999999999998765554433
No 161
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=99.27 E-value=1.2e-12 Score=132.69 Aligned_cols=104 Identities=20% Similarity=0.155 Sum_probs=82.5
Q ss_pred CHHHHHHHHHhhH--hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEE
Q 012224 351 SRQELEVACEDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYC 427 (468)
Q Consensus 351 ~~~el~~at~~~~--~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~ 427 (468)
.+.++...+++|. ++||+|+||.||+|+.. +++.||||++..... ......+.|.+|++++.+++|+|||+++++|
T Consensus 65 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~ 143 (437)
T 4aw2_A 65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEM-LKRAETACFREERDVLVNGDSKWITTLHYAF 143 (437)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHH-HHTTTTCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred hhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHh-hhHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence 3445555566775 89999999999999987 588899999853221 1111233588999999999999999999999
Q ss_pred EcCCCCcEEEEEEecCCCChhhhhhcCCCC
Q 012224 428 RESSPFTRMLVFDYASNGTLYEHLHCKSSS 457 (468)
Q Consensus 428 ~~~~~~~~~lv~ey~~~GsL~~~L~~~~~~ 457 (468)
.+.+ ..++|||||++|+|.++|+..+..
T Consensus 144 ~~~~--~~~lV~Ey~~gg~L~~~l~~~~~~ 171 (437)
T 4aw2_A 144 QDDN--NLYLVMDYYVGGDLLTLLSKFEDR 171 (437)
T ss_dssp ECSS--EEEEEECCCTTCBHHHHHHTTTTC
T ss_pred eeCC--EEEEEEecCCCCcHHHHHHHccCC
Confidence 9877 899999999999999999874443
No 162
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=99.27 E-value=5.1e-12 Score=125.48 Aligned_cols=87 Identities=18% Similarity=0.245 Sum_probs=70.3
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEec
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~ 442 (468)
+.||+|+||.||+|... +|..||+|++.... ....++|.+|++++.+++|+|||+++++|.+.+ ..++||||+
T Consensus 95 ~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~--~~~lv~E~~ 168 (373)
T 2x4f_A 95 EILGGGRFGQVHKCEETATGLKLAAKIIKTRG----MKDKEEVKNEISVMNQLDHANLIQLYDAFESKN--DIVLVMEYV 168 (373)
T ss_dssp EECC-----CEEEEEETTTCCEEEEEEEECCS----HHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEEEECC
T ss_pred eEEecCcCEEEEEEEEcCCCcEEEEEEEcccc----cccHHHHHHHHHHHHhCCCCCCCeEEEEEEECC--EEEEEEeCC
Confidence 57999999999999875 79999999985432 134568999999999999999999999999876 899999999
Q ss_pred CCCChhhhhhcCCC
Q 012224 443 SNGTLYEHLHCKSS 456 (468)
Q Consensus 443 ~~GsL~~~L~~~~~ 456 (468)
++|+|.+++.....
T Consensus 169 ~~~~L~~~l~~~~~ 182 (373)
T 2x4f_A 169 DGGELFDRIIDESY 182 (373)
T ss_dssp TTCEEHHHHHHTGG
T ss_pred CCCcHHHHHHhcCC
Confidence 99999999976543
No 163
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=99.26 E-value=2.4e-12 Score=128.06 Aligned_cols=92 Identities=22% Similarity=0.342 Sum_probs=77.0
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEec
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~ 442 (468)
+.||+|+||.||+|... +++.||||.+... ......++|.+|++++.+++|+|||+++++|...+ ..++||||+
T Consensus 120 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~lv~e~~ 194 (377)
T 3cbl_A 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRET---LPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQ--PIYIVMELV 194 (377)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEECCTT---SCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSS--SCEEEEECC
T ss_pred eEeccCCCCeEEEEEEecCCeEEEEEEcccc---CCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCC--CcEEEEEcC
Confidence 68999999999999987 7899999998432 12233457999999999999999999999998776 789999999
Q ss_pred CCCChhhhhhcCCCCccc
Q 012224 443 SNGTLYEHLHCKSSSLYI 460 (468)
Q Consensus 443 ~~GsL~~~L~~~~~~~~~ 460 (468)
++|+|.++++.....+..
T Consensus 195 ~~g~L~~~l~~~~~~~~~ 212 (377)
T 3cbl_A 195 QGGDFLTFLRTEGARLRV 212 (377)
T ss_dssp TTCBHHHHHHHHGGGCCH
T ss_pred CCCCHHHHHHhcCCCCCH
Confidence 999999999865444433
No 164
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=99.25 E-value=2e-11 Score=118.52 Aligned_cols=89 Identities=15% Similarity=0.215 Sum_probs=73.4
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCC---------
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPF--------- 433 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~--------- 433 (468)
+.||+|+||.||+|+.. +|+.||||++..... ....+.|.+|++++++++|+|||+++++|.+....
T Consensus 12 ~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~ 88 (332)
T 3qd2_B 12 QCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNR---ELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMDEI 88 (332)
T ss_dssp EEEECC-CSEEEEEEETTTCCEEEEEEEECCST---TTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHHHC-
T ss_pred eEecCCCCeEEEEEEEcCCCcEEEEEEeecCCc---hhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhhhhh
Confidence 78999999999999987 899999999864332 23457899999999999999999999998654310
Q ss_pred ----------------------------------------------cEEEEEEecCCCChhhhhhcCC
Q 012224 434 ----------------------------------------------TRMLVFDYASNGTLYEHLHCKS 455 (468)
Q Consensus 434 ----------------------------------------------~~~lv~ey~~~GsL~~~L~~~~ 455 (468)
..++||||+++|+|.+++....
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~ 156 (332)
T 3qd2_B 89 WLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRC 156 (332)
T ss_dssp -------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCC
T ss_pred hhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhccc
Confidence 2789999999999999998653
No 165
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=99.25 E-value=7.5e-12 Score=131.31 Aligned_cols=92 Identities=20% Similarity=0.099 Sum_probs=72.0
Q ss_pred HhhH--hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHH---HHHHHHHhcCCCCCccceeeEEEcCCCC
Q 012224 360 EDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYF---QREVADLARINHENTGKLLGYCRESSPF 433 (468)
Q Consensus 360 ~~~~--~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f---~~e~~~l~~l~H~nlv~l~g~~~~~~~~ 433 (468)
++|. ++||+|+||.||+|+.. +|+.||||++...... .......+ ..++++++.++|||||++++++.+.+
T Consensus 189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~-~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~-- 265 (689)
T 3v5w_A 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIK-MKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD-- 265 (689)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHH-HTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSS--
T ss_pred HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcc-hhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECC--
Confidence 3454 78999999999999886 7999999999543211 01112223 34467788899999999999999877
Q ss_pred cEEEEEEecCCCChhhhhhcC
Q 012224 434 TRMLVFDYASNGTLYEHLHCK 454 (468)
Q Consensus 434 ~~~lv~ey~~~GsL~~~L~~~ 454 (468)
..++|||||++|+|.++|...
T Consensus 266 ~lylVmEy~~GGdL~~~l~~~ 286 (689)
T 3v5w_A 266 KLSFILDLMNGGDLHYHLSQH 286 (689)
T ss_dssp EEEEEECCCCSCBHHHHHHHH
T ss_pred EEEEEEecCCCCcHHHHHHhc
Confidence 899999999999999999754
No 166
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=99.25 E-value=7.5e-12 Score=118.97 Aligned_cols=89 Identities=20% Similarity=0.307 Sum_probs=73.4
Q ss_pred hHhccCCceEEEEEEECCCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEecC
Q 012224 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~~ 443 (468)
+.||+|+||.||+|...++..||||++..... ..++|.+|++++.+++|+||++++++|.+.. ..++||||++
T Consensus 30 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~~ 102 (283)
T 3gen_A 30 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-----SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQR--PIFIITEYMA 102 (283)
T ss_dssp EECC---CEEEEEEEETTTEEEEEEEECTTSB-----CHHHHHHHHHHHHTCCCTTBCCEEEEECSSS--SEEEEECCCT
T ss_pred hhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-----CHHHHHHHHHHHhcCCCCCEeeEEEEEecCC--CeEEEEeccC
Confidence 67999999999999998888999999853322 2467999999999999999999999998776 7899999999
Q ss_pred CCChhhhhhcCCCCcc
Q 012224 444 NGTLYEHLHCKSSSLY 459 (468)
Q Consensus 444 ~GsL~~~L~~~~~~~~ 459 (468)
+|+|.++++.....+.
T Consensus 103 ~~~L~~~l~~~~~~~~ 118 (283)
T 3gen_A 103 NGCLLNYLREMRHRFQ 118 (283)
T ss_dssp TCBHHHHHHCGGGCCC
T ss_pred CCcHHHHHHHhccCCC
Confidence 9999999987444443
No 167
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=99.24 E-value=6.8e-12 Score=118.27 Aligned_cols=86 Identities=26% Similarity=0.344 Sum_probs=74.9
Q ss_pred hHhccCCceEEEEEEECCCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEecC
Q 012224 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~~ 443 (468)
+.||+|+||.||+|...++..||||++..... ..++|.+|++++.+++|+||+++++++.+.. ..++||||++
T Consensus 14 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~~ 86 (268)
T 3sxs_A 14 KELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-----SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEY--PIYIVTEYIS 86 (268)
T ss_dssp EEEEEETTEEEEEEEETTTEEEEEEEECBTTB-----CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--SEEEEEECCT
T ss_pred eeeccCCCceEEEEEecCceeEEEEEeccCCC-----cHHHHHHHHHHHHhCCCCCEeeEEEEEccCC--ceEEEEEccC
Confidence 67999999999999998888899999854322 2467999999999999999999999998776 7899999999
Q ss_pred CCChhhhhhcCCC
Q 012224 444 NGTLYEHLHCKSS 456 (468)
Q Consensus 444 ~GsL~~~L~~~~~ 456 (468)
+|+|.++++....
T Consensus 87 ~~~L~~~l~~~~~ 99 (268)
T 3sxs_A 87 NGCLLNYLRSHGK 99 (268)
T ss_dssp TCBHHHHHHHHGG
T ss_pred CCcHHHHHHHcCC
Confidence 9999999976543
No 168
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=99.23 E-value=6.4e-12 Score=120.27 Aligned_cols=92 Identities=22% Similarity=0.251 Sum_probs=74.8
Q ss_pred hHhccCCceEEEEEEEC-----CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEE
Q 012224 364 NIIGSSPDSLVYKGTMK-----GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-----~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv 438 (468)
+.||+|+||.||+|++. +|+.||||++.... ....+.|.+|++++.+++|+||++++++|...+....++|
T Consensus 16 ~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 91 (295)
T 3ugc_A 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST----EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLI 91 (295)
T ss_dssp EEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCC----HHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCEEE
T ss_pred heeeccCCEEEEEEEEecccCCCCcEEEEEEcccCC----HHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceEEE
Confidence 67999999999999852 68899999984322 2345689999999999999999999999965432257999
Q ss_pred EEecCCCChhhhhhcCCCCcc
Q 012224 439 FDYASNGTLYEHLHCKSSSLY 459 (468)
Q Consensus 439 ~ey~~~GsL~~~L~~~~~~~~ 459 (468)
|||+++|+|.++++.....+.
T Consensus 92 ~e~~~~~~L~~~l~~~~~~~~ 112 (295)
T 3ugc_A 92 MEYLPYGSLRDYLQKHKERID 112 (295)
T ss_dssp EECCTTCBHHHHHHHCGGGCC
T ss_pred EEeCCCCCHHHHHHhcccccC
Confidence 999999999999987654333
No 169
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=99.22 E-value=1.7e-11 Score=120.04 Aligned_cols=96 Identities=16% Similarity=0.176 Sum_probs=78.2
Q ss_pred HHHHHHhhH--hHhccCCceEEEEEEEC-CCCeEEEEEEeecc-cccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcC
Q 012224 355 LEVACEDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKE-EHWTGYLELYFQREVADLARINHENTGKLLGYCRES 430 (468)
Q Consensus 355 l~~at~~~~--~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~-~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~ 430 (468)
+....++|. +.||+|+||.||+|... ++..||+|++.... ........+.|.+|++++.+++|+|||+++++|.+.
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 100 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE 100 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence 344455564 78999999999999885 78899999985432 111223457899999999999999999999999887
Q ss_pred CCCcEEEEEEecCCCChhhhhh
Q 012224 431 SPFTRMLVFDYASNGTLYEHLH 452 (468)
Q Consensus 431 ~~~~~~lv~ey~~~GsL~~~L~ 452 (468)
+ ..++||||+++|+|.+++.
T Consensus 101 ~--~~~lv~e~~~gg~L~~~l~ 120 (345)
T 3hko_A 101 Q--YICLVMELCHGGHLLDKLN 120 (345)
T ss_dssp S--EEEEEEECCCSCBHHHHEE
T ss_pred C--eEEEEEeCCCCCcHHHHHH
Confidence 6 8999999999999999996
No 170
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=99.22 E-value=1.3e-11 Score=119.90 Aligned_cols=89 Identities=13% Similarity=0.176 Sum_probs=75.9
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEec
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~ 442 (468)
+.||+|+||.||+|... +|..+|+|.+.... .....+.+|++++.+++||||+++++++.+.+ ..++||||+
T Consensus 11 ~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-----~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~--~~~lv~e~~ 83 (321)
T 1tki_A 11 EDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-----TDQVLVKKEISILNIARHRNILHLHESFESME--ELVMIFEFI 83 (321)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECCCT-----HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETT--EEEEEECCC
T ss_pred eEEecCCCeEEEEEEECCCCcEEEEEEEecCc-----ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCC--EEEEEEEeC
Confidence 67999999999999886 68899999985322 23567899999999999999999999998876 899999999
Q ss_pred CCCChhhhhhcCCCCcc
Q 012224 443 SNGTLYEHLHCKSSSLY 459 (468)
Q Consensus 443 ~~GsL~~~L~~~~~~~~ 459 (468)
++|+|.+++......++
T Consensus 84 ~g~~L~~~l~~~~~~~~ 100 (321)
T 1tki_A 84 SGLDIFERINTSAFELN 100 (321)
T ss_dssp CCCBHHHHHTSSSCCCC
T ss_pred CCCCHHHHHHhcCCCCC
Confidence 99999999986654443
No 171
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=99.22 E-value=7.4e-12 Score=123.55 Aligned_cols=81 Identities=19% Similarity=0.216 Sum_probs=69.2
Q ss_pred hHhccCCceEEEEEEEC----CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcC-CCCCccceeeEEEcCCCCcEEEE
Q 012224 364 NIIGSSPDSLVYKGTMK----GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLV 438 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~----~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l-~H~nlv~l~g~~~~~~~~~~~lv 438 (468)
+.||+|+||+||+|+.. .++.||||++.... ....+.+|+++|.++ +|+|||++++++.+.+ ..++|
T Consensus 27 ~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~------~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~--~~~lv 98 (361)
T 4f9c_A 27 DKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS------HPIRIAAELQCLTVAGGQDNVMGVKYCFRKND--HVVIA 98 (361)
T ss_dssp EEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS------CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETT--EEEEE
T ss_pred EEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc------CHHHHHHHHHHHHHhcCCCCCceEEEEEEECC--EEEEE
Confidence 78999999999999753 46789999984322 234688999999998 6999999999998877 89999
Q ss_pred EEecCCCChhhhhh
Q 012224 439 FDYASNGTLYEHLH 452 (468)
Q Consensus 439 ~ey~~~GsL~~~L~ 452 (468)
||||++|+|.++++
T Consensus 99 mE~~~g~~L~~~~~ 112 (361)
T 4f9c_A 99 MPYLEHESFLDILN 112 (361)
T ss_dssp EECCCCCCHHHHHT
T ss_pred EeCCCcccHHHHHc
Confidence 99999999999985
No 172
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=99.21 E-value=3.2e-12 Score=128.52 Aligned_cols=102 Identities=21% Similarity=0.144 Sum_probs=81.6
Q ss_pred CHHHHHHHHHhhH--hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEE
Q 012224 351 SRQELEVACEDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYC 427 (468)
Q Consensus 351 ~~~el~~at~~~~--~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~ 427 (468)
.++++....++|. ++||+|+||.||+++.. +|+.||||++..... ......+.+.+|.+++.+++|+|||++++++
T Consensus 52 ~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~-~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~ 130 (412)
T 2vd5_A 52 RLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDM-LKRGEVSCFREERDVLVNGDRRWITQLHFAF 130 (412)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHH-HHHGGGCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred hhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHh-hhHHHHHHHHHHHHHHHhcCCCCeeeEEEEE
Confidence 3444444556675 88999999999999986 799999999853221 1112234588999999999999999999999
Q ss_pred EcCCCCcEEEEEEecCCCChhhhhhcCC
Q 012224 428 RESSPFTRMLVFDYASNGTLYEHLHCKS 455 (468)
Q Consensus 428 ~~~~~~~~~lv~ey~~~GsL~~~L~~~~ 455 (468)
.+.+ ..++||||+++|+|.++|+..+
T Consensus 131 ~~~~--~~~lVmE~~~gg~L~~~l~~~~ 156 (412)
T 2vd5_A 131 QDEN--YLYLVMEYYVGGDLLTLLSKFG 156 (412)
T ss_dssp ECSS--EEEEEECCCCSCBHHHHHHHHS
T ss_pred eeCC--EEEEEEcCCCCCcHHHHHHhcC
Confidence 9877 8999999999999999997643
No 173
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=99.21 E-value=9.5e-12 Score=128.30 Aligned_cols=84 Identities=25% Similarity=0.331 Sum_probs=73.9
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEec
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~ 442 (468)
+.||+|+||.||+|... ++..||||.+..... ..++|.+|+++|.+++|+|||+++++|.... ..++|||||
T Consensus 226 ~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~--~~~lv~E~~ 298 (495)
T 1opk_A 226 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-----EVEEFLKEAAVMKEIKHPNLVQLLGVCTREP--PFYIITEFM 298 (495)
T ss_dssp EESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS-----CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--SCEEEEECC
T ss_pred eEecCCCCeEEEEEEEcCCCeEEEEEEecCccc-----chHHHHHHHHHHHhcCCCCEeeEEEEEecCC--cEEEEEEcc
Confidence 68999999999999987 488999999853321 2568999999999999999999999998876 789999999
Q ss_pred CCCChhhhhhcC
Q 012224 443 SNGTLYEHLHCK 454 (468)
Q Consensus 443 ~~GsL~~~L~~~ 454 (468)
++|+|.++|+..
T Consensus 299 ~~g~L~~~l~~~ 310 (495)
T 1opk_A 299 TYGNLLDYLREC 310 (495)
T ss_dssp TTCBHHHHHHHS
T ss_pred CCCCHHHHHHhc
Confidence 999999999864
No 174
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=99.21 E-value=2.4e-11 Score=117.78 Aligned_cols=89 Identities=25% Similarity=0.330 Sum_probs=74.7
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEec
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~ 442 (468)
+.||+|+||.||+|... +|+.||||++..... ....+.+.+|++++.+++|+||+++++++........++||||+
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~ 91 (319)
T 4euu_A 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISF---LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFC 91 (319)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECGGGG---GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEECC
T ss_pred EEecCCCCeEEEEEEECCCCcEEEEEEeccccc---cchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEeCC
Confidence 67999999999999987 689999999853321 12356788999999999999999999999876544679999999
Q ss_pred CCCChhhhhhcCC
Q 012224 443 SNGTLYEHLHCKS 455 (468)
Q Consensus 443 ~~GsL~~~L~~~~ 455 (468)
++|+|.+++....
T Consensus 92 ~~~~L~~~l~~~~ 104 (319)
T 4euu_A 92 PCGSLYTVLEEPS 104 (319)
T ss_dssp TTCBHHHHHHSGG
T ss_pred CCCCHHHHHHHhc
Confidence 9999999998643
No 175
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.20 E-value=1.5e-11 Score=115.63 Aligned_cols=88 Identities=23% Similarity=0.292 Sum_probs=76.0
Q ss_pred hHhccCCceEEEEEEECCCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEecC
Q 012224 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~~ 443 (468)
+.||+|+||.||+|...++..||+|.+..... ..+++.+|++++.+++|+||+++++++.+.+ ..++||||++
T Consensus 14 ~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~~ 86 (267)
T 3t9t_A 14 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-----SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQA--PICLVTEFME 86 (267)
T ss_dssp EEEEEETTEEEEEEEETTTEEEEEEEECTTTB-----CHHHHHHHHHHHHTCCCTTBCCEEEEECSSS--SCEEEECCCT
T ss_pred eEecCCCceeEEEEEecCCCeEEEEEccccCC-----CHHHHHHHHHHHHhCCCCCEeeEEEEEccCC--CeEEEEeCCC
Confidence 67999999999999998888999999853322 2467999999999999999999999998876 7899999999
Q ss_pred CCChhhhhhcCCCCc
Q 012224 444 NGTLYEHLHCKSSSL 458 (468)
Q Consensus 444 ~GsL~~~L~~~~~~~ 458 (468)
+|+|.++++.....+
T Consensus 87 ~~~L~~~~~~~~~~~ 101 (267)
T 3t9t_A 87 HGCLSDYLRTQRGLF 101 (267)
T ss_dssp TCBHHHHHHHTTTCC
T ss_pred CCcHHHHHhhCcccC
Confidence 999999998765433
No 176
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=99.20 E-value=3.2e-11 Score=116.48 Aligned_cols=87 Identities=28% Similarity=0.348 Sum_probs=74.6
Q ss_pred hHhccCCceEEEEEEECCCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEecC
Q 012224 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~~ 443 (468)
+.||+|+||.||+|+. .|+.||||++..... .....++|.+|++++.+++|+||+++++++.... ..++||||++
T Consensus 43 ~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~e~~~ 117 (309)
T 3p86_A 43 EKIGAGSFGTVHRAEW-HGSDVAVKILMEQDF--HAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPP--NLSIVTEYLS 117 (309)
T ss_dssp EEEEECSSEEEEEEEE-TTEEEEEEEECCCCC--SHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT--CCEEEEECCT
T ss_pred eEeecCCCeEEEEEEE-CCCcEEEEEecCCCC--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC--ceEEEEecCC
Confidence 7899999999999987 678899999854322 2234568999999999999999999999998876 7899999999
Q ss_pred CCChhhhhhcCC
Q 012224 444 NGTLYEHLHCKS 455 (468)
Q Consensus 444 ~GsL~~~L~~~~ 455 (468)
+|+|.++++...
T Consensus 118 ~~~L~~~l~~~~ 129 (309)
T 3p86_A 118 RGSLYRLLHKSG 129 (309)
T ss_dssp TCBHHHHHHSTT
T ss_pred CCcHHHHHhhcC
Confidence 999999998653
No 177
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=99.20 E-value=3.4e-11 Score=117.34 Aligned_cols=87 Identities=24% Similarity=0.253 Sum_probs=74.9
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEec
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~ 442 (468)
+.||+|+||.||+|... +|+.||||++..... .....+.+.+|++++.+++|+||+++++++...+ ..++||||+
T Consensus 21 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~--~~~lv~e~~ 96 (328)
T 3fe3_A 21 KTIGKGNFAKVKLARHILTGREVAIKIIDKTQL--NPTSLQKLFREVRIMKILNHPNIVKLFEVIETEK--TLYLIMEYA 96 (328)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEECCC
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcC--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC--EEEEEEECC
Confidence 67999999999999874 899999999854321 2234567899999999999999999999998876 899999999
Q ss_pred CCCChhhhhhcC
Q 012224 443 SNGTLYEHLHCK 454 (468)
Q Consensus 443 ~~GsL~~~L~~~ 454 (468)
++|+|.+++...
T Consensus 97 ~~~~L~~~l~~~ 108 (328)
T 3fe3_A 97 SGGEVFDYLVAH 108 (328)
T ss_dssp TTCBHHHHHHHH
T ss_pred CCCcHHHHHHHc
Confidence 999999999654
No 178
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=99.20 E-value=4e-11 Score=118.44 Aligned_cols=89 Identities=25% Similarity=0.284 Sum_probs=75.3
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeeccccc--chhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEE
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHW--TGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~--~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~e 440 (468)
+.||+|+||.||+|... +|+.||||.+....... .....+.+.+|++++.+++||||+++++++.+.. ..++|||
T Consensus 18 ~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~--~~~lv~e 95 (361)
T 2yab_A 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRT--DVVLILE 95 (361)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEEEE
T ss_pred eEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCC--EEEEEEE
Confidence 67999999999999886 79999999986543211 1123568999999999999999999999998876 8999999
Q ss_pred ecCCCChhhhhhcC
Q 012224 441 YASNGTLYEHLHCK 454 (468)
Q Consensus 441 y~~~GsL~~~L~~~ 454 (468)
|+++|+|.+++..+
T Consensus 96 ~~~gg~L~~~l~~~ 109 (361)
T 2yab_A 96 LVSGGELFDFLAQK 109 (361)
T ss_dssp CCCSCBHHHHHTTC
T ss_pred cCCCCcHHHHHHhc
Confidence 99999999999754
No 179
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=99.20 E-value=1.8e-11 Score=115.18 Aligned_cols=90 Identities=22% Similarity=0.365 Sum_probs=75.6
Q ss_pred hHhccCCceEEEEEEECCCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEecC
Q 012224 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~~ 443 (468)
+.||+|+||.||+|+.. |+.+|||++..... .....+.|.+|++++.+++|+||++++++|.+.+....++|+||++
T Consensus 16 ~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~ 92 (271)
T 3kmu_A 16 TKLNENHSGELWKGRWQ-GNDIVVKVLKVRDW--STRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMP 92 (271)
T ss_dssp EEEEEETTEEEEEEEET-TEEEEEEEECCTTC--CHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEECCT
T ss_pred HHhcCCCcceEEEEEEC-CeeEEEEEeccccc--CHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeecccC
Confidence 67999999999999985 88899999854321 2234568999999999999999999999998763337899999999
Q ss_pred CCChhhhhhcCCC
Q 012224 444 NGTLYEHLHCKSS 456 (468)
Q Consensus 444 ~GsL~~~L~~~~~ 456 (468)
+|+|.++++....
T Consensus 93 ~~~L~~~l~~~~~ 105 (271)
T 3kmu_A 93 YGSLYNVLHEGTN 105 (271)
T ss_dssp TCBHHHHHHSCSS
T ss_pred CCcHHHHHhhccc
Confidence 9999999987543
No 180
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=99.20 E-value=5.3e-11 Score=115.83 Aligned_cols=89 Identities=24% Similarity=0.276 Sum_probs=75.4
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeeccccc--chhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEE
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHW--TGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~--~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~e 440 (468)
+.||+|+||.||+|... +|..||||.+....... .....+.+.+|++++.+++|+||+++++++.... ..++|||
T Consensus 17 ~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~e 94 (326)
T 2y0a_A 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKT--DVILILE 94 (326)
T ss_dssp EEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEEE
T ss_pred eEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC--EEEEEEE
Confidence 78999999999999886 78999999986543211 1123568999999999999999999999999876 8999999
Q ss_pred ecCCCChhhhhhcC
Q 012224 441 YASNGTLYEHLHCK 454 (468)
Q Consensus 441 y~~~GsL~~~L~~~ 454 (468)
|+++|+|.+++...
T Consensus 95 ~~~~~~L~~~l~~~ 108 (326)
T 2y0a_A 95 LVAGGELFDFLAEK 108 (326)
T ss_dssp CCCSCBHHHHHTTS
T ss_pred cCCCCCHHHHHHhc
Confidence 99999999999754
No 181
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=99.20 E-value=5.9e-12 Score=126.52 Aligned_cols=98 Identities=19% Similarity=0.154 Sum_probs=78.1
Q ss_pred HHHHHHHhhH--hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcC
Q 012224 354 ELEVACEDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRES 430 (468)
Q Consensus 354 el~~at~~~~--~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~ 430 (468)
++....++|. ++||+|+||.||+|+.. +|+.||+|++..... ......+.+.+|++++..++|+|||+++++|.+.
T Consensus 63 ~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~-~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 141 (410)
T 3v8s_A 63 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEM-IKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 141 (410)
T ss_dssp HHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHH-HHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhh-hhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEEC
Confidence 3333445565 78999999999999987 689999999853211 0111234588999999999999999999999987
Q ss_pred CCCcEEEEEEecCCCChhhhhhcC
Q 012224 431 SPFTRMLVFDYASNGTLYEHLHCK 454 (468)
Q Consensus 431 ~~~~~~lv~ey~~~GsL~~~L~~~ 454 (468)
+ ..++|||||++|+|.++++..
T Consensus 142 ~--~~~lV~E~~~gg~L~~~l~~~ 163 (410)
T 3v8s_A 142 R--YLYMVMEYMPGGDLVNLMSNY 163 (410)
T ss_dssp S--EEEEEECCCTTEEHHHHHHHC
T ss_pred C--EEEEEEeCCCCCcHHHHHHcC
Confidence 6 899999999999999999754
No 182
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=99.19 E-value=3.5e-11 Score=115.50 Aligned_cols=85 Identities=16% Similarity=0.244 Sum_probs=74.0
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEec
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~ 442 (468)
+.||+|+||.||+|... +|+.||||++...... ..+.+.+|+.++.+++|+||+++++++...+ ..++||||+
T Consensus 26 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~e~~ 99 (297)
T 3fxz_A 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP----KKELIINEILVMRENKNPNIVNYLDSYLVGD--ELWVVMEYL 99 (297)
T ss_dssp EEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCS----CHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEEECC
T ss_pred eeeccCCCeEEEEEEECCCCcEEEEEEeeccccc----HHHHHHHHHHHHhcCCCCCCCeEeEEEEECC--EEEEEEECC
Confidence 67999999999999864 7999999998544322 3467899999999999999999999998877 899999999
Q ss_pred CCCChhhhhhcC
Q 012224 443 SNGTLYEHLHCK 454 (468)
Q Consensus 443 ~~GsL~~~L~~~ 454 (468)
++|+|.+++...
T Consensus 100 ~~~~L~~~~~~~ 111 (297)
T 3fxz_A 100 AGGSLTDVVTET 111 (297)
T ss_dssp TTCBHHHHHHHS
T ss_pred CCCCHHHHHhhc
Confidence 999999999754
No 183
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=99.19 E-value=3.1e-11 Score=120.36 Aligned_cols=90 Identities=13% Similarity=0.213 Sum_probs=76.4
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEec
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~ 442 (468)
+.||+|+||.||+|... +|+.+|+|.+.... ......+.+|++++.+++|+|||++++++.+.. ..++||||+
T Consensus 57 ~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~----~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~--~~~lv~E~~ 130 (387)
T 1kob_A 57 EELGSGAFGVVHRCVEKATGRVFVAKFINTPY----PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKY--EMVLILEFL 130 (387)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECCS----HHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSS--EEEEEEECC
T ss_pred EEEecCCCEEEEEEEECCCCCEEEEEEecccc----hhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCC--EEEEEEEcC
Confidence 67999999999999886 78999999985332 123457899999999999999999999998876 899999999
Q ss_pred CCCChhhhhhcCCCCcc
Q 012224 443 SNGTLYEHLHCKSSSLY 459 (468)
Q Consensus 443 ~~GsL~~~L~~~~~~~~ 459 (468)
++|+|.+++......++
T Consensus 131 ~gg~L~~~l~~~~~~l~ 147 (387)
T 1kob_A 131 SGGELFDRIAAEDYKMS 147 (387)
T ss_dssp CCCBHHHHTTCTTCCBC
T ss_pred CCCcHHHHHHhhcCCCC
Confidence 99999999986654443
No 184
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.19 E-value=1.1e-10 Score=114.82 Aligned_cols=171 Identities=19% Similarity=0.147 Sum_probs=132.4
Q ss_pred CCCEEEEEecCCCCcccCCc-cccCCCCCCE-EEccCccccccCChhhcCCCCCCEEEccCCCCCCCCCcCCCCCcccce
Q 012224 69 RDRVLKINISGSSLKGFLAP-ELGLLTYLQE-LILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVK 146 (468)
Q Consensus 69 ~~~v~~L~L~~n~l~g~~p~-~l~~l~~L~~-L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~ 146 (468)
..+++.|+|++|.+.+.+|. .+.++++|++ +++++|++++..|..|..+++|++|++++|++++..+..+....++..
T Consensus 53 l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~ 132 (350)
T 4ay9_X 53 FGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVL 132 (350)
T ss_dssp CTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEE
T ss_pred CCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhh
Confidence 45899999999999888875 5788988775 677889999888899999999999999999999766667778888999
Q ss_pred eeccc-ccCcccCChhccCCC-CCcEEeccCCCCCccCCCCCCccccccccccccCC-CCccC-----ccCCCCCCEEEc
Q 012224 147 INLQS-NGLTGRLPAELGNLI-SLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASS-ANLTG-----LCHLSQLKVADF 218 (468)
Q Consensus 147 L~Ls~-N~l~g~~p~~l~~l~-~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~-n~l~~-----~~~l~~L~~l~l 218 (468)
|++.+ |++....+..+..+. .|+.|++++|+++ .||...... ..+..++++. |.+.. +..+++|+.||+
T Consensus 133 l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~-~i~~~~f~~--~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdL 209 (350)
T 4ay9_X 133 LDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ-EIHNSAFNG--TQLDELNLSDNNNLEELPNDVFHGASGPVILDI 209 (350)
T ss_dssp EEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC-EECTTSSTT--EEEEEEECTTCTTCCCCCTTTTTTEECCSEEEC
T ss_pred hhhccccccccccccchhhcchhhhhhcccccccc-CCChhhccc--cchhHHhhccCCcccCCCHHHhccCcccchhhc
Confidence 99976 566644444566654 6899999999998 566643321 3566777764 55544 356789999999
Q ss_pred ccCcCccCCCccccCCCCCcccCC
Q 012224 219 SYNFFVGSIPKCLEYLPSTSFQGN 242 (468)
Q Consensus 219 s~N~l~g~ip~~~~~l~~~~~~~n 242 (468)
++|+++..-+..+.+++.+...++
T Consensus 210 s~N~l~~lp~~~~~~L~~L~~l~~ 233 (350)
T 4ay9_X 210 SRTRIHSLPSYGLENLKKLRARST 233 (350)
T ss_dssp TTSCCCCCCSSSCTTCCEEECTTC
T ss_pred CCCCcCccChhhhccchHhhhccC
Confidence 999999554556778877766554
No 185
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=99.19 E-value=3.1e-11 Score=118.73 Aligned_cols=88 Identities=19% Similarity=0.257 Sum_probs=73.9
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecc-cccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEe
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKE-EHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~-~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey 441 (468)
+.||+|+||.||+|... +|+.||||++.... ........+.|.+|++++.+++|+|||++++++.+.+ ..++||||
T Consensus 30 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~--~~~lv~e~ 107 (351)
T 3c0i_A 30 EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDG--MLYMVFEF 107 (351)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEEEC
T ss_pred eEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC--EEEEEEeC
Confidence 78999999999999876 79999999985432 1111123567999999999999999999999998876 89999999
Q ss_pred cCCCChhhhhhc
Q 012224 442 ASNGTLYEHLHC 453 (468)
Q Consensus 442 ~~~GsL~~~L~~ 453 (468)
+++|+|.+++..
T Consensus 108 ~~g~~L~~~l~~ 119 (351)
T 3c0i_A 108 MDGADLCFEIVK 119 (351)
T ss_dssp CSSCBHHHHHHH
T ss_pred CCCCCHHHHHHH
Confidence 999999988864
No 186
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.18 E-value=3.1e-11 Score=115.27 Aligned_cols=87 Identities=13% Similarity=0.132 Sum_probs=74.4
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEec
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~ 442 (468)
+.||+|+||.||+|... +|+.||||.+...... .....+.|.+|++.+.+++|+||+++++++...+ ..++||||+
T Consensus 37 ~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~e~~ 113 (286)
T 3uqc_A 37 IFHGGVPPLQFWQALDTALDRQVALTFVDPQGVL-PDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRA--GGLVVAEWI 113 (286)
T ss_dssp EEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCS-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT--EEEEEEECC
T ss_pred EEEcccCCeEEEEEEecCCCceEEEEEECccccc-CHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECC--cEEEEEEec
Confidence 57999999999999986 5899999998543221 2234578999999999999999999999998876 899999999
Q ss_pred CCCChhhhhhc
Q 012224 443 SNGTLYEHLHC 453 (468)
Q Consensus 443 ~~GsL~~~L~~ 453 (468)
++|+|.+++..
T Consensus 114 ~g~~L~~~l~~ 124 (286)
T 3uqc_A 114 RGGSLQEVADT 124 (286)
T ss_dssp CEEEHHHHHTT
T ss_pred CCCCHHHHHhc
Confidence 99999999954
No 187
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=99.18 E-value=3.1e-11 Score=123.04 Aligned_cols=83 Identities=16% Similarity=0.229 Sum_probs=72.7
Q ss_pred hHhccCCceEEEEEEECCCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEecC
Q 012224 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~~ 443 (468)
+.||+|+||.||+|.+.++..||||++..... ..++|.+|++++.+++|+|||+++++|.. + ..++|||||+
T Consensus 194 ~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~-----~~~~~~~E~~~l~~l~h~~iv~l~~~~~~-~--~~~lv~e~~~ 265 (454)
T 1qcf_A 194 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGSM-----SVEAFLAEANVMKTLQHDKLVKLHAVVTK-E--PIYIITEFMA 265 (454)
T ss_dssp EEEECCSSEEEEEEEETTTEEEEEEEECTTSB-----CHHHHHHHHHHHTTCCCTTBCCEEEEECS-S--SCEEEECCCT
T ss_pred EEcccCCceEEEEEEECCccEEEEEEecCCCc-----cHHHHHHHHHHHhhCCCCCEeeEEEEEeC-C--ccEEEEeecC
Confidence 68999999999999998888999999853321 35689999999999999999999999874 3 5899999999
Q ss_pred CCChhhhhhcC
Q 012224 444 NGTLYEHLHCK 454 (468)
Q Consensus 444 ~GsL~~~L~~~ 454 (468)
+|+|.++|+..
T Consensus 266 ~g~L~~~l~~~ 276 (454)
T 1qcf_A 266 KGSLLDFLKSD 276 (454)
T ss_dssp TCBHHHHHHSH
T ss_pred CCcHHHHHHhc
Confidence 99999999854
No 188
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.18 E-value=2.6e-11 Score=128.26 Aligned_cols=92 Identities=20% Similarity=0.255 Sum_probs=75.3
Q ss_pred HhccCCceEEEEEEEC---CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEe
Q 012224 365 IIGSSPDSLVYKGTMK---GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (468)
Q Consensus 365 ~lg~G~~g~vy~~~~~---~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey 441 (468)
.||+|+||.||+|.+. ++..||||++.... .....++|.+|+++|.+++|+|||+++++|... ..++||||
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~~---~~~lv~E~ 416 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT---EKADTEEMMREAQIMHQLDNPYIVRLIGVCQAE---ALMLVMEM 416 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCC---SSTTHHHHHHHHHHHTTCCCTTBCCEEEEEESS---SEEEEEEC
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCC---ChHHHHHHHHHHHHHHhCCCCCEeeEEEEeccC---CeEEEEEe
Confidence 6999999999999874 45679999985432 123467899999999999999999999999863 58999999
Q ss_pred cCCCChhhhhhcCCCCcccce
Q 012224 442 ASNGTLYEHLHCKSSSLYIIG 462 (468)
Q Consensus 442 ~~~GsL~~~L~~~~~~~~~~~ 462 (468)
|++|+|.++|+.+...+...+
T Consensus 417 ~~~g~L~~~l~~~~~~l~~~~ 437 (613)
T 2ozo_A 417 AGGGPLHKFLVGKREEIPVSN 437 (613)
T ss_dssp CTTCBHHHHHTTCTTTSCHHH
T ss_pred CCCCcHHHHHhhccCCCCHHH
Confidence 999999999987655444433
No 189
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=99.18 E-value=5.2e-11 Score=117.69 Aligned_cols=87 Identities=25% Similarity=0.303 Sum_probs=75.2
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEec
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~ 442 (468)
+.||+|+||.||+|... +|..||||.+..... .....+.+.+|++++.+++|+|||++++++.+.+ ..++||||+
T Consensus 35 ~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~--~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~--~~~lv~e~~ 110 (362)
T 2bdw_A 35 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL--SARDFQKLEREARICRKLQHPNIVRLHDSIQEES--FHYLVFDLV 110 (362)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEETTTC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEECCC
T ss_pred eEEecCCCeEEEEEEECCCCCEEEEEEEEcccC--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC--EEEEEEecC
Confidence 78999999999999886 789999999854322 2234567999999999999999999999999876 899999999
Q ss_pred CCCChhhhhhcC
Q 012224 443 SNGTLYEHLHCK 454 (468)
Q Consensus 443 ~~GsL~~~L~~~ 454 (468)
++|+|.+++..+
T Consensus 111 ~gg~L~~~l~~~ 122 (362)
T 2bdw_A 111 TGGELFEDIVAR 122 (362)
T ss_dssp CSCBHHHHHTTC
T ss_pred CCCCHHHHHHHc
Confidence 999999998754
No 190
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=99.18 E-value=2.2e-11 Score=116.05 Aligned_cols=89 Identities=17% Similarity=0.276 Sum_probs=74.0
Q ss_pred hHhccCCceEEEEEEEC-CC-------CeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcE
Q 012224 364 NIIGSSPDSLVYKGTMK-GG-------PEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTR 435 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g-------~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~ 435 (468)
+.||+|+||.||+|... ++ ..||+|.+.... ....+.|.+|++++.+++|+||+++++++...+ ..
T Consensus 14 ~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~ 87 (289)
T 4fvq_A 14 ESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH----RNYSESFFEAASMMSKLSHKHLVLNYGVCVCGD--EN 87 (289)
T ss_dssp EEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGG----GGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTT--CC
T ss_pred eeeccCCCceEEEEEEecccccccccchhhhhhhccccc----HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCC--CC
Confidence 67999999999999875 33 469999884322 234578999999999999999999999998876 78
Q ss_pred EEEEEecCCCChhhhhhcCCCCc
Q 012224 436 MLVFDYASNGTLYEHLHCKSSSL 458 (468)
Q Consensus 436 ~lv~ey~~~GsL~~~L~~~~~~~ 458 (468)
++||||+++|+|.++++.....+
T Consensus 88 ~lv~e~~~~~~L~~~l~~~~~~~ 110 (289)
T 4fvq_A 88 ILVQEFVKFGSLDTYLKKNKNCI 110 (289)
T ss_dssp EEEEECCTTCBHHHHHHHTGGGC
T ss_pred EEEEECCCCCCHHHHHHhCCCCC
Confidence 99999999999999998754433
No 191
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.18 E-value=3.2e-11 Score=118.43 Aligned_cols=86 Identities=15% Similarity=0.210 Sum_probs=73.0
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEec
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~ 442 (468)
+.||+|+||.||+|... +|+.||||++...... ...+.+.+|++++.+++|+||+++++++.+.+ ..++||||+
T Consensus 16 ~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~---~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~--~~~lv~E~~ 90 (347)
T 3zgw_A 16 ETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLG---SDLPRIKTEIEALKNLRHQHICQLYHVLETAN--KIFMVLEYC 90 (347)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEESSCC------CCHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEEEEECC
T ss_pred EEEEcCCCeEEEEEEECCCCCEEEEEEEEccccc---hHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCC--EEEEEEeCC
Confidence 68999999999999875 8999999998543211 12346889999999999999999999999877 899999999
Q ss_pred CCCChhhhhhcC
Q 012224 443 SNGTLYEHLHCK 454 (468)
Q Consensus 443 ~~GsL~~~L~~~ 454 (468)
++|+|.+++..+
T Consensus 91 ~gg~L~~~l~~~ 102 (347)
T 3zgw_A 91 PGGELFDYIISQ 102 (347)
T ss_dssp TTCBHHHHHHHH
T ss_pred CCCCHHHHHHHc
Confidence 999999999654
No 192
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=99.18 E-value=3e-11 Score=119.75 Aligned_cols=87 Identities=24% Similarity=0.251 Sum_probs=73.1
Q ss_pred hHhccCCceEEEEEEEC--------CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcC-CCCCccceeeEEEcCCCCc
Q 012224 364 NIIGSSPDSLVYKGTMK--------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFT 434 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~--------~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l-~H~nlv~l~g~~~~~~~~~ 434 (468)
+.||+|+||.||+|... ++..||||++.... .....+.|.+|++++.++ +|+|||+++++|.+.+ .
T Consensus 87 ~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~--~ 161 (370)
T 2psq_A 87 KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA---TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG--P 161 (370)
T ss_dssp EEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTC---BHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSS--S
T ss_pred eEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCc---CHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCC--C
Confidence 67999999999999862 34579999984321 223456899999999999 8999999999998876 7
Q ss_pred EEEEEEecCCCChhhhhhcCC
Q 012224 435 RMLVFDYASNGTLYEHLHCKS 455 (468)
Q Consensus 435 ~~lv~ey~~~GsL~~~L~~~~ 455 (468)
.++||||+++|+|.++++...
T Consensus 162 ~~lv~e~~~~g~L~~~l~~~~ 182 (370)
T 2psq_A 162 LYVIVEYASKGNLREYLRARR 182 (370)
T ss_dssp CEEEEECCTTCBHHHHHHHTC
T ss_pred EEEEEEcCCCCCHHHHHHhhC
Confidence 899999999999999998643
No 193
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=99.17 E-value=5.8e-11 Score=113.73 Aligned_cols=88 Identities=22% Similarity=0.285 Sum_probs=75.2
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEec
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~ 442 (468)
+.||+|+||.||++... ++..||+|++...... .....+.|.+|++++.+++|+||+++++++.+.+ ..++||||+
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~e~~ 93 (294)
T 4eqm_A 17 DKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPRE-KEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDD--CYYLVMEYI 93 (294)
T ss_dssp EEEEEETTEEEEEEEETTTCSEEEEEEEECCSSC-CHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSS--EEEEEEECC
T ss_pred EEEccCCCEEEEEEEECCCCCeEEEEEeccCccc-cHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCC--eEEEEEeCC
Confidence 67999999999999875 7899999998543322 2234568999999999999999999999998876 899999999
Q ss_pred CCCChhhhhhcC
Q 012224 443 SNGTLYEHLHCK 454 (468)
Q Consensus 443 ~~GsL~~~L~~~ 454 (468)
++|+|.+++...
T Consensus 94 ~g~~L~~~l~~~ 105 (294)
T 4eqm_A 94 EGPTLSEYIESH 105 (294)
T ss_dssp CSCBHHHHHHHH
T ss_pred CCCCHHHHHHhc
Confidence 999999999754
No 194
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=99.16 E-value=3.1e-11 Score=115.69 Aligned_cols=93 Identities=24% Similarity=0.274 Sum_probs=72.9
Q ss_pred hHhccCCceEEEEEEE-----CCCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEE
Q 012224 364 NIIGSSPDSLVYKGTM-----KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~-----~~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv 438 (468)
+.||+|+||.||+|++ .+|+.||||++..... ....+.+.+|++++.+++|+||+++++++........++|
T Consensus 27 ~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 103 (302)
T 4e5w_A 27 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG---GNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLI 103 (302)
T ss_dssp EEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC--------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEEEE
T ss_pred hccCCCCceEEEEEEEccccCccCeEEEEEEeccccc---chhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEEEE
Confidence 6799999999999985 3688999999854321 1235679999999999999999999999987643368999
Q ss_pred EEecCCCChhhhhhcCCCCcc
Q 012224 439 FDYASNGTLYEHLHCKSSSLY 459 (468)
Q Consensus 439 ~ey~~~GsL~~~L~~~~~~~~ 459 (468)
+||+++|+|.++++.....+.
T Consensus 104 ~e~~~~~~L~~~l~~~~~~~~ 124 (302)
T 4e5w_A 104 MEFLPSGSLKEYLPKNKNKIN 124 (302)
T ss_dssp EECCTTCBHHHHHHHHTTTCC
T ss_pred EEeCCCCcHHHHHHhccccCC
Confidence 999999999999975544433
No 195
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=99.16 E-value=4.5e-11 Score=116.92 Aligned_cols=88 Identities=19% Similarity=0.092 Sum_probs=74.4
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEec
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~ 442 (468)
+.||+|+||.||++... +|+.||+|++..... ......+.+.+|++++.+++|+||+++++++.+.+ ..++||||+
T Consensus 11 ~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~--~~~lv~E~~ 87 (337)
T 1o6l_A 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVI-IAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHD--RLCFVMEYA 87 (337)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHH-HHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSS--EEEEEEECC
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEEeHHHh-hhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCC--EEEEEEeCC
Confidence 78999999999999886 799999999853321 11223567899999999999999999999999877 899999999
Q ss_pred CCCChhhhhhcC
Q 012224 443 SNGTLYEHLHCK 454 (468)
Q Consensus 443 ~~GsL~~~L~~~ 454 (468)
++|+|.+++...
T Consensus 88 ~gg~L~~~l~~~ 99 (337)
T 1o6l_A 88 NGGELFFHLSRE 99 (337)
T ss_dssp TTCBHHHHHHHH
T ss_pred CCCcHHHHHHhc
Confidence 999999999753
No 196
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=99.16 E-value=2.7e-11 Score=117.95 Aligned_cols=89 Identities=17% Similarity=0.157 Sum_probs=67.9
Q ss_pred hHhccCCceEEEEEEE----CCCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEE
Q 012224 364 NIIGSSPDSLVYKGTM----KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~----~~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ 439 (468)
+.||+|+||.||++.. .+|+.||+|++..............+.+|++++.+++|+||+++++++...+ ..++||
T Consensus 23 ~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~ 100 (327)
T 3a62_A 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGG--KLYLIL 100 (327)
T ss_dssp EEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSS--CEEEEE
T ss_pred EEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCC--EEEEEE
Confidence 7899999999999987 4789999999854321111223456889999999999999999999998876 799999
Q ss_pred EecCCCChhhhhhcC
Q 012224 440 DYASNGTLYEHLHCK 454 (468)
Q Consensus 440 ey~~~GsL~~~L~~~ 454 (468)
||+++|+|.+++...
T Consensus 101 e~~~~~~L~~~l~~~ 115 (327)
T 3a62_A 101 EYLSGGELFMQLERE 115 (327)
T ss_dssp ECCTTEEHHHHHHHH
T ss_pred eCCCCCcHHHHHHhC
Confidence 999999999999753
No 197
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=99.16 E-value=4e-11 Score=116.59 Aligned_cols=86 Identities=22% Similarity=0.308 Sum_probs=71.9
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEec
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~ 442 (468)
+.||+|+||.||+|... +++.||||++...... ...+.+.+|+.++.+++|+|||++++++.+.+ ..++||||+
T Consensus 13 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~--~~~lv~e~~ 87 (323)
T 3tki_A 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV---DCPENIKKEICINKMLNHENVVKFYGHRREGN--IQYLFLEYC 87 (323)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECC----------CHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEEECC
T ss_pred eEEecCCCEEEEEEEECCCCcEEEEEEEEccccc---chHHHHHHHHHHHHhCCCCCCCeEEEEEecCC--eEEEEEEcC
Confidence 67999999999999886 7899999998543321 22457889999999999999999999999876 889999999
Q ss_pred CCCChhhhhhcC
Q 012224 443 SNGTLYEHLHCK 454 (468)
Q Consensus 443 ~~GsL~~~L~~~ 454 (468)
++|+|.++++..
T Consensus 88 ~~~~L~~~l~~~ 99 (323)
T 3tki_A 88 SGGELFDRIEPD 99 (323)
T ss_dssp TTEEGGGGSBTT
T ss_pred CCCcHHHHHhhc
Confidence 999999999754
No 198
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=99.15 E-value=4.2e-11 Score=115.71 Aligned_cols=91 Identities=21% Similarity=0.283 Sum_probs=74.0
Q ss_pred hHhccCCceEEEEEEECCCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEecC
Q 012224 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~~ 443 (468)
+.||+|+||.||+|...+|+.||||++..... .....+.+.+|++++.+++|+|||++++++.+.. ..++||||++
T Consensus 27 ~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~e~~~ 102 (311)
T 3niz_A 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAE--DEGIPSTAIREISLLKELHHPNIVSLIDVIHSER--CLTLVFEFME 102 (311)
T ss_dssp EEEEECSSCEEEEEEETTSCEEEEEEEC--------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSS--CEEEEEECCS
T ss_pred hhccCCCCeEEEEEEECCCCEEEEEEEecccc--cchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCC--EEEEEEcCCC
Confidence 67999999999999998899999999854321 1223567899999999999999999999998776 7999999998
Q ss_pred CCChhhhhhcCCCCcc
Q 012224 444 NGTLYEHLHCKSSSLY 459 (468)
Q Consensus 444 ~GsL~~~L~~~~~~~~ 459 (468)
|+|.+++......+.
T Consensus 103 -~~l~~~~~~~~~~~~ 117 (311)
T 3niz_A 103 -KDLKKVLDENKTGLQ 117 (311)
T ss_dssp -EEHHHHHHTCTTCCC
T ss_pred -CCHHHHHHhccCCCC
Confidence 589998876654433
No 199
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=99.15 E-value=4.2e-11 Score=119.84 Aligned_cols=89 Identities=25% Similarity=0.330 Sum_probs=74.6
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEec
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~ 442 (468)
+.||+|+||.||+|... +|+.||||++..... ....+.+.+|++++.+++|+|||++++++........++||||+
T Consensus 15 ~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e~~ 91 (396)
T 4eut_A 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISF---LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFC 91 (396)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECGGGG---GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEECCC
T ss_pred EEEEcCCCeEEEEEEECCCCcEEEEEEeccccc---cchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEecC
Confidence 67999999999999987 699999999853321 12356788999999999999999999999876544679999999
Q ss_pred CCCChhhhhhcCC
Q 012224 443 SNGTLYEHLHCKS 455 (468)
Q Consensus 443 ~~GsL~~~L~~~~ 455 (468)
++|+|.++++...
T Consensus 92 ~~g~L~~~l~~~~ 104 (396)
T 4eut_A 92 PCGSLYTVLEEPS 104 (396)
T ss_dssp TTEEHHHHTTSGG
T ss_pred CCCCHHHHHHhhh
Confidence 9999999997643
No 200
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=99.15 E-value=4.2e-11 Score=122.05 Aligned_cols=82 Identities=23% Similarity=0.303 Sum_probs=71.9
Q ss_pred hHhccCCceEEEEEEECCCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEecC
Q 012224 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~~ 443 (468)
+.||+|+||.||+|...++..||||++..... ..++|.+|+++|.+++|+||++++++|.+ + ..++|||||+
T Consensus 190 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-----~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~--~~~iv~e~~~ 261 (452)
T 1fmk_A 190 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-----SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-E--PIYIVTEYMS 261 (452)
T ss_dssp EEEEECSSCEEEEEEETTTEEEEEEECCTTSS-----CHHHHHHHHHHHHHCCCTTBCCEEEEECS-S--SCEEEECCCT
T ss_pred eeecCCCCeEEEEEEECCCceEEEEEeccCCC-----CHHHHHHHHHHHHhCCCCCEeeEEEEEcC-C--ceEEEehhhc
Confidence 67999999999999998878899999853321 24689999999999999999999999976 3 5899999999
Q ss_pred CCChhhhhhc
Q 012224 444 NGTLYEHLHC 453 (468)
Q Consensus 444 ~GsL~~~L~~ 453 (468)
+|+|.++|+.
T Consensus 262 ~gsL~~~l~~ 271 (452)
T 1fmk_A 262 KGSLLDFLKG 271 (452)
T ss_dssp TCBHHHHHSH
T ss_pred CCCHHHHHHh
Confidence 9999999975
No 201
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=99.14 E-value=4e-11 Score=113.03 Aligned_cols=88 Identities=26% Similarity=0.287 Sum_probs=69.2
Q ss_pred hHhccCCceEEEEEEECCCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEecC
Q 012224 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~~ 443 (468)
+.||+|+||.||+|... |..+|||++............+.|.+|++++.+++|+||++++++|...+ ..++|+||++
T Consensus 13 ~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~~ 89 (271)
T 3dtc_A 13 EIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEP--NLCLVMEFAR 89 (271)
T ss_dssp EEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC----CEEEEECCT
T ss_pred eeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC--ceEEEEEcCC
Confidence 68999999999999985 78899999854332222233568999999999999999999999998876 7899999999
Q ss_pred CCChhhhhhcC
Q 012224 444 NGTLYEHLHCK 454 (468)
Q Consensus 444 ~GsL~~~L~~~ 454 (468)
+|+|.++++.+
T Consensus 90 ~~~L~~~~~~~ 100 (271)
T 3dtc_A 90 GGPLNRVLSGK 100 (271)
T ss_dssp TEEHHHHHTSS
T ss_pred CCCHHHHhhcC
Confidence 99999998643
No 202
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=99.14 E-value=5.4e-11 Score=112.69 Aligned_cols=93 Identities=22% Similarity=0.271 Sum_probs=76.8
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEec
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~ 442 (468)
+.||+|+||.||+|+.. +|+.||||.+...... .....+.+.+|++++.+++|+||+++++++.+.+ ..++|+||+
T Consensus 17 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 93 (278)
T 3cok_A 17 NLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMY-KAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSN--YVYLVLEMC 93 (278)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHH-HTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSS--EEEEEEECC
T ss_pred eeecCCCceEEEEEEEccCCceEEEEEeehhhhh-hhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCC--eEEEEEecC
Confidence 67999999999999875 7999999998533211 1123467999999999999999999999999876 889999999
Q ss_pred CCCChhhhhhcCCCCcc
Q 012224 443 SNGTLYEHLHCKSSSLY 459 (468)
Q Consensus 443 ~~GsL~~~L~~~~~~~~ 459 (468)
++|+|.+++......++
T Consensus 94 ~~~~L~~~l~~~~~~~~ 110 (278)
T 3cok_A 94 HNGEMNRYLKNRVKPFS 110 (278)
T ss_dssp TTEEHHHHHHTCSSCCC
T ss_pred CCCcHHHHHhhccCCCC
Confidence 99999999987544433
No 203
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=99.14 E-value=6e-11 Score=115.06 Aligned_cols=88 Identities=16% Similarity=0.120 Sum_probs=74.4
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEec
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~ 442 (468)
+.||+|+||.||+++.. +|+.||+|++...... .....+.+.+|+.++..++|+||+++++++.+.. ..++||||+
T Consensus 12 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~--~~~lv~e~~ 88 (318)
T 1fot_A 12 RTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVV-RLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQ--QIFMIMDYI 88 (318)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHH-HTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSS--EEEEEECCC
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCC--EEEEEEeCC
Confidence 68999999999999886 7999999998533211 1123567889999999999999999999999876 899999999
Q ss_pred CCCChhhhhhcC
Q 012224 443 SNGTLYEHLHCK 454 (468)
Q Consensus 443 ~~GsL~~~L~~~ 454 (468)
++|+|.++++..
T Consensus 89 ~gg~L~~~l~~~ 100 (318)
T 1fot_A 89 EGGELFSLLRKS 100 (318)
T ss_dssp CSCBHHHHHHHT
T ss_pred CCCCHHHHHHHc
Confidence 999999999754
No 204
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.14 E-value=7.4e-11 Score=112.37 Aligned_cols=91 Identities=20% Similarity=0.252 Sum_probs=74.4
Q ss_pred hHhccCCceEEEEEEEC---CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEE
Q 012224 364 NIIGSSPDSLVYKGTMK---GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~---~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~e 440 (468)
..||+|+||.||+|++. ++..||||.+.... .....+.|.+|++++.+++|+||+++++++.. + ..++|+|
T Consensus 16 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~--~~~lv~e 89 (287)
T 1u59_A 16 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT---EKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-E--ALMLVME 89 (287)
T ss_dssp EEEECCTTEEEEEEEEC---CCEEEEEEEECSSC---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-S--SEEEEEE
T ss_pred ccccccCceeEEEeEeccCCCcceEEEEecCCcc---chhHHHHHHHHHHHHHhCCCCCEeEEEEEecC-C--CcEEEEE
Confidence 37999999999999864 57789999985432 22346789999999999999999999999954 3 5899999
Q ss_pred ecCCCChhhhhhcCCCCccc
Q 012224 441 YASNGTLYEHLHCKSSSLYI 460 (468)
Q Consensus 441 y~~~GsL~~~L~~~~~~~~~ 460 (468)
|+++|+|.+++......++.
T Consensus 90 ~~~~~~L~~~l~~~~~~~~~ 109 (287)
T 1u59_A 90 MAGGGPLHKFLVGKREEIPV 109 (287)
T ss_dssp CCTTEEHHHHHTTCTTTSCH
T ss_pred eCCCCCHHHHHHhCCccCCH
Confidence 99999999999765554443
No 205
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=99.14 E-value=5.3e-11 Score=121.21 Aligned_cols=84 Identities=24% Similarity=0.324 Sum_probs=72.1
Q ss_pred hHhccCCceEEEEEEECCCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEecC
Q 012224 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~~ 443 (468)
+.||+|+||.||+|.+. |+.||||++.... ..++|.+|+++|.+++|+|||+++++|.+.+ ...++|||||+
T Consensus 199 ~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~~iv~e~~~ 270 (450)
T 1k9a_A 199 QTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA------TAQAFLAEASVMTQLRHSNLVQLLGVIVEEK-GGLYIVTEYMA 270 (450)
T ss_dssp EEEEECSSEEEEEEEET-TEEEEEEEESSCT------TSHHHHHHHHHHHTCCCTTBCCEEEEEECTT-SCEEEEEECCT
T ss_pred eeecCcCCeeEEEEEec-CCeEEEEEeCCch------HHHHHHHHHHHHHhccCCCEEEEEEEEEcCC-CceEEEEEecC
Confidence 78999999999999985 7799999985322 2467999999999999999999999987653 15899999999
Q ss_pred CCChhhhhhcCC
Q 012224 444 NGTLYEHLHCKS 455 (468)
Q Consensus 444 ~GsL~~~L~~~~ 455 (468)
+|+|.++|+...
T Consensus 271 ~g~L~~~l~~~~ 282 (450)
T 1k9a_A 271 KGSLVDYLRSRG 282 (450)
T ss_dssp TCBHHHHHHHHC
T ss_pred CCcHHHHHHhcC
Confidence 999999998654
No 206
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=99.14 E-value=2.5e-11 Score=119.51 Aligned_cols=94 Identities=21% Similarity=0.226 Sum_probs=75.2
Q ss_pred HHhhH--hHhccCCceEEEEEEE------CCCCeEEEEEEeecccccchhhHHHHHHHHHHHhcC-CCCCccceeeEEEc
Q 012224 359 CEDFS--NIIGSSPDSLVYKGTM------KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRE 429 (468)
Q Consensus 359 t~~~~--~~lg~G~~g~vy~~~~------~~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l-~H~nlv~l~g~~~~ 429 (468)
.++|. +.||+|+||.||+|.. .+++.||||++.... .....+.|.+|++++.++ +|+|||+++++|.+
T Consensus 21 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~ 97 (359)
T 3vhe_A 21 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA---THSEHRALMSELKILIHIGHHLNVVNLLGACTK 97 (359)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC---CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred ccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcC---CHHHHHHHHHHHHHHHhhcCCcceeeeeeeeec
Confidence 34443 7899999999999974 256789999985321 223456799999999999 89999999999987
Q ss_pred CCCCcEEEEEEecCCCChhhhhhcCCC
Q 012224 430 SSPFTRMLVFDYASNGTLYEHLHCKSS 456 (468)
Q Consensus 430 ~~~~~~~lv~ey~~~GsL~~~L~~~~~ 456 (468)
.+ ...++||||+++|+|.++++....
T Consensus 98 ~~-~~~~iv~e~~~~g~L~~~l~~~~~ 123 (359)
T 3vhe_A 98 PG-GPLMVIVEFCKFGNLSTYLRSKRN 123 (359)
T ss_dssp TT-SCCEEEEECCTTEEHHHHHHTTTT
T ss_pred CC-CceEEEEEecCCCcHHHHHHhccc
Confidence 54 148999999999999999987543
No 207
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=99.14 E-value=5.1e-11 Score=116.37 Aligned_cols=86 Identities=29% Similarity=0.368 Sum_probs=73.3
Q ss_pred hHhccCCceEEEEEEEC------CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEE
Q 012224 364 NIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~------~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~l 437 (468)
+.||+|+||.||+|... +++.||||.+.... .....+.|.+|++++.+++|+||++++++|...+ ..++
T Consensus 53 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~l 127 (343)
T 1luf_A 53 RDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA---SADMQADFQREAALMAEFDNPNIVKLLGVCAVGK--PMCL 127 (343)
T ss_dssp EEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC---CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS--SCEE
T ss_pred eeeeecCCeeEEEEEecCcCCCCCceeEEEEEecccc---CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCC--ceEE
Confidence 78999999999999874 34789999985322 2234568999999999999999999999998876 7899
Q ss_pred EEEecCCCChhhhhhcC
Q 012224 438 VFDYASNGTLYEHLHCK 454 (468)
Q Consensus 438 v~ey~~~GsL~~~L~~~ 454 (468)
||||+++|+|.++++..
T Consensus 128 v~e~~~~~~L~~~l~~~ 144 (343)
T 1luf_A 128 LFEYMAYGDLNEFLRSM 144 (343)
T ss_dssp EEECCTTCBHHHHHHHT
T ss_pred EEecCCCCcHHHHHHHh
Confidence 99999999999999864
No 208
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=99.14 E-value=1.1e-10 Score=111.16 Aligned_cols=85 Identities=16% Similarity=0.179 Sum_probs=73.8
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEec
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~ 442 (468)
+.||+|+||.||++... +|..+|+|++..... ....+.+.+|++++.+++|+||+++++++.+.. ..++||||+
T Consensus 28 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~---~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~e~~ 102 (285)
T 3is5_A 28 RKLGSGAFGDVHLVEERSSGLERVIKTINKDRS---QVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYH--NMYIVMETC 102 (285)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC---CSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEEEECCC
T ss_pred ceeccCCCeEEEEEEEccCCceEEEEEeecccc---chhHHHHHHHHHHHHhCCCchHHhHHHheecCC--eEEEEEEeC
Confidence 78999999999999876 789999999854332 123568999999999999999999999998876 899999999
Q ss_pred CCCChhhhhhc
Q 012224 443 SNGTLYEHLHC 453 (468)
Q Consensus 443 ~~GsL~~~L~~ 453 (468)
++|+|.+++..
T Consensus 103 ~~~~L~~~l~~ 113 (285)
T 3is5_A 103 EGGELLERIVS 113 (285)
T ss_dssp SCCBHHHHHHH
T ss_pred CCCcHHHHHHh
Confidence 99999999964
No 209
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=99.13 E-value=1.1e-10 Score=113.47 Aligned_cols=82 Identities=24% Similarity=0.321 Sum_probs=72.1
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCC-CCCccceeeEEEcCCCCcEEEEEEe
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFTRMLVFDY 441 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~-H~nlv~l~g~~~~~~~~~~~lv~ey 441 (468)
+.||+|+||.||+|... +|+.||||++... ....+.+|++++.+++ |+|||++++++.+.. ..++||||
T Consensus 17 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-------~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~--~~~lv~e~ 87 (325)
T 3kn6_A 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKR-------MEANTQKEITALKLCEGHPNIVKLHEVFHDQL--HTFLVMEL 87 (325)
T ss_dssp CCSEEETTEEEEEEEETTTCCEEEEEEEEGG-------GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--EEEEEECC
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEChh-------hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCC--EEEEEEEc
Confidence 57999999999999986 7899999998421 2457889999999997 999999999999876 89999999
Q ss_pred cCCCChhhhhhcC
Q 012224 442 ASNGTLYEHLHCK 454 (468)
Q Consensus 442 ~~~GsL~~~L~~~ 454 (468)
+++|+|.+++..+
T Consensus 88 ~~~~~L~~~l~~~ 100 (325)
T 3kn6_A 88 LNGGELFERIKKK 100 (325)
T ss_dssp CCSCBHHHHHHHC
T ss_pred cCCCcHHHHHHhc
Confidence 9999999999764
No 210
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=99.13 E-value=3e-11 Score=119.65 Aligned_cols=87 Identities=23% Similarity=0.302 Sum_probs=73.2
Q ss_pred hHhccCCceEEEEEEEC------CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEE
Q 012224 364 NIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~------~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~l 437 (468)
+.||+|+||.||+|.+. ++..||||++... ........|.+|+.++.+++|+|||++++++.+.. ..++
T Consensus 77 ~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~--~~~l 151 (367)
T 3l9p_A 77 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV---CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL--PRFI 151 (367)
T ss_dssp EECCCCSSSCEEEEEECC-----CCEEEEEEECCSS---CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--SCEE
T ss_pred eEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccc---cChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCC--CCEE
Confidence 67999999999999853 4668999998422 12234567999999999999999999999998876 7899
Q ss_pred EEEecCCCChhhhhhcCC
Q 012224 438 VFDYASNGTLYEHLHCKS 455 (468)
Q Consensus 438 v~ey~~~GsL~~~L~~~~ 455 (468)
||||+++|+|.++++...
T Consensus 152 v~e~~~~g~L~~~l~~~~ 169 (367)
T 3l9p_A 152 LLELMAGGDLKSFLRETR 169 (367)
T ss_dssp EEECCTTEEHHHHHHHHS
T ss_pred EEEeCCCCCHHHHHHhhc
Confidence 999999999999998543
No 211
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=99.13 E-value=4.5e-11 Score=116.07 Aligned_cols=85 Identities=19% Similarity=0.265 Sum_probs=70.2
Q ss_pred hHhccCCceEEEEEEECCCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCC--CcEEEEEEe
Q 012224 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP--FTRMLVFDY 441 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~--~~~~lv~ey 441 (468)
+.||+|+||.||+|+.. ++.||||++.... .....+..|+.++.+++|+|||++++++..... ...++||||
T Consensus 30 ~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~ 103 (322)
T 3soc_A 30 EVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-----KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAF 103 (322)
T ss_dssp EEEECSTTCEEEEEEET-TEEEEEEEECGGG-----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEEC
T ss_pred heecccCceEEEEEEEC-CCEEEEEEeecCc-----hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEec
Confidence 68999999999999885 7889999984322 234466779999999999999999999987541 136899999
Q ss_pred cCCCChhhhhhcC
Q 012224 442 ASNGTLYEHLHCK 454 (468)
Q Consensus 442 ~~~GsL~~~L~~~ 454 (468)
+++|+|.++++.+
T Consensus 104 ~~~g~L~~~l~~~ 116 (322)
T 3soc_A 104 HEKGSLSDFLKAN 116 (322)
T ss_dssp CTTCBHHHHHHHC
T ss_pred CCCCCHHHHHHhc
Confidence 9999999999764
No 212
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=99.13 E-value=7.9e-11 Score=116.32 Aligned_cols=84 Identities=21% Similarity=0.235 Sum_probs=73.1
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEec
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~ 442 (468)
+.||+|+||.||++... +|+.||||++..... ..+.+.+|+.++++++|+|||++++++.+.. ..++||||+
T Consensus 26 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~lv~e~~ 98 (361)
T 3uc3_A 26 KDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-----IDENVQREIINHRSLRHPNIVRFKEVILTPT--HLAIIMEYA 98 (361)
T ss_dssp EEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-----SCHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEEECC
T ss_pred EEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-----ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCC--EEEEEEEeC
Confidence 67999999999999987 789999999853322 2356889999999999999999999999876 899999999
Q ss_pred CCCChhhhhhcC
Q 012224 443 SNGTLYEHLHCK 454 (468)
Q Consensus 443 ~~GsL~~~L~~~ 454 (468)
++|+|.+++...
T Consensus 99 ~~~~L~~~l~~~ 110 (361)
T 3uc3_A 99 SGGELYERICNA 110 (361)
T ss_dssp CSCBHHHHHHHH
T ss_pred CCCCHHHHHHhc
Confidence 999999999653
No 213
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=99.13 E-value=8.1e-11 Score=111.98 Aligned_cols=92 Identities=28% Similarity=0.373 Sum_probs=73.8
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhh---HHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEE
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYL---ELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~---~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ 439 (468)
+.||+|+||.||+|... +++.||||++........... .+.|.+|++++.+++|+||+++++++.+. .++||
T Consensus 25 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~----~~lv~ 100 (287)
T 4f0f_A 25 KQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNP----PRMVM 100 (287)
T ss_dssp EECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTT----TEEEE
T ss_pred hccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCC----CeEEE
Confidence 67999999999999885 789999999854432211111 16899999999999999999999998653 37999
Q ss_pred EecCCCChhhhhhcCCCCcc
Q 012224 440 DYASNGTLYEHLHCKSSSLY 459 (468)
Q Consensus 440 ey~~~GsL~~~L~~~~~~~~ 459 (468)
||+++|+|.+++..+...+.
T Consensus 101 e~~~~~~L~~~l~~~~~~~~ 120 (287)
T 4f0f_A 101 EFVPCGDLYHRLLDKAHPIK 120 (287)
T ss_dssp ECCTTCBHHHHHHCTTSCCC
T ss_pred EecCCCCHHHHHhcccCCcc
Confidence 99999999999977655443
No 214
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=99.13 E-value=5.3e-11 Score=115.68 Aligned_cols=90 Identities=21% Similarity=0.193 Sum_probs=74.2
Q ss_pred hHhccCCceEEEEEEE-----CCCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEE
Q 012224 364 NIIGSSPDSLVYKGTM-----KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~-----~~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv 438 (468)
+.||+|+||.||+|++ .++..||||++.... ....+.|.+|++++.+++|+||+++++++...+....++|
T Consensus 29 ~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 104 (327)
T 3lxl_A 29 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG----PDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLV 104 (327)
T ss_dssp EEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCC----HHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEEE
T ss_pred hhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCC----HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEEEE
Confidence 6899999999999985 368889999985322 2345679999999999999999999999875443368899
Q ss_pred EEecCCCChhhhhhcCCCC
Q 012224 439 FDYASNGTLYEHLHCKSSS 457 (468)
Q Consensus 439 ~ey~~~GsL~~~L~~~~~~ 457 (468)
|||+++|+|.+++......
T Consensus 105 ~e~~~~~~L~~~l~~~~~~ 123 (327)
T 3lxl_A 105 MEYLPSGCLRDFLQRHRAR 123 (327)
T ss_dssp EECCTTCBHHHHHHHHGGG
T ss_pred EeecCCCCHHHHHHhcccC
Confidence 9999999999999764433
No 215
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=99.13 E-value=6.5e-11 Score=113.22 Aligned_cols=88 Identities=23% Similarity=0.252 Sum_probs=73.2
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCC-----------
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS----------- 431 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~----------- 431 (468)
+.||+|+||.||+|... +|+.||||++.... ...+.+.+|++++.+++|+||+++++++.+..
T Consensus 12 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~ 86 (303)
T 1zy4_A 12 AVLGQGAFGQVVKARNALDSRYYAIKKIRHTE-----EKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKK 86 (303)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEEEH-----HHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------C
T ss_pred heeccCCcEEEEEEEEcCCCeEEEEEEEeccH-----HHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhccccc
Confidence 78999999999999875 79999999984321 23567999999999999999999999886521
Q ss_pred CCcEEEEEEecCCCChhhhhhcCCC
Q 012224 432 PFTRMLVFDYASNGTLYEHLHCKSS 456 (468)
Q Consensus 432 ~~~~~lv~ey~~~GsL~~~L~~~~~ 456 (468)
....++|+||+++|+|.++++....
T Consensus 87 ~~~~~lv~e~~~~~~L~~~l~~~~~ 111 (303)
T 1zy4_A 87 KSTLFIQMEYCENGTLYDLIHSENL 111 (303)
T ss_dssp EEEEEEEEECCCSCBHHHHHHHSCG
T ss_pred CCceEEEEecCCCCCHHHhhhcccc
Confidence 1257899999999999999986543
No 216
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.13 E-value=4.9e-11 Score=116.39 Aligned_cols=92 Identities=25% Similarity=0.348 Sum_probs=75.0
Q ss_pred hHhccCCceEEEEEEECC-----CCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEE
Q 012224 364 NIIGSSPDSLVYKGTMKG-----GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~~-----g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv 438 (468)
+.||+|+||.||+|.... +..||||.+.... .......|.+|++++.+++|+||+++++++...+ ..++|
T Consensus 50 ~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv 124 (333)
T 1mqb_A 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY---TEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYK--PMMII 124 (333)
T ss_dssp EEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC---CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS--SEEEE
T ss_pred cEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCC---CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCC--CcEEE
Confidence 679999999999998752 2359999985322 2234567999999999999999999999998776 79999
Q ss_pred EEecCCCChhhhhhcCCCCccc
Q 012224 439 FDYASNGTLYEHLHCKSSSLYI 460 (468)
Q Consensus 439 ~ey~~~GsL~~~L~~~~~~~~~ 460 (468)
|||+++|+|.++++.....+..
T Consensus 125 ~e~~~~~~L~~~l~~~~~~~~~ 146 (333)
T 1mqb_A 125 TEYMENGALDKFLREKDGEFSV 146 (333)
T ss_dssp EECCTTEEHHHHHHHTTTCSCH
T ss_pred EeCCCCCcHHHHHHhCCCCCCH
Confidence 9999999999999876554443
No 217
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=99.13 E-value=8.2e-11 Score=119.44 Aligned_cols=87 Identities=22% Similarity=0.308 Sum_probs=73.3
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEec
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~ 442 (468)
+.||+|+||.||+|... +|+.+|+|++.... ......+.+.+|++++.+++|||||++++++.+.+ ..++||||+
T Consensus 17 ~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~--~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~--~~~lv~E~~ 92 (444)
T 3soa_A 17 EELGKGAFSVVRRCVKVLAGQEYAAMIINTKK--LSARDHQKLEREARICRLLKHPNIVRLHDSISEEG--HHYLIFDLV 92 (444)
T ss_dssp EEEEEC--CEEEEEEETTTTEEEEEEEEESCS--CHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSS--EEEEEECCC
T ss_pred EEeccCCCeEEEEEEECCCCcEEEEEEEEccc--CCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECC--EEEEEEEeC
Confidence 78999999999999875 78999999985432 12234567999999999999999999999999877 899999999
Q ss_pred CCCChhhhhhcC
Q 012224 443 SNGTLYEHLHCK 454 (468)
Q Consensus 443 ~~GsL~~~L~~~ 454 (468)
++|+|.+++..+
T Consensus 93 ~gg~L~~~i~~~ 104 (444)
T 3soa_A 93 TGGELFEDIVAR 104 (444)
T ss_dssp BCCBHHHHHHHC
T ss_pred CCCCHHHHHHHc
Confidence 999999999764
No 218
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=99.13 E-value=7.4e-11 Score=115.97 Aligned_cols=83 Identities=23% Similarity=0.292 Sum_probs=66.9
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEec
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~ 442 (468)
+.||+|+||.||+|+.. +++.||||++.... ..+.+.+|++++.+++|+||++++++|...+ ..++||||+
T Consensus 59 ~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~lv~e~~ 130 (349)
T 2w4o_A 59 SELGRGATSIVYRCKQKGTQKPYALKVLKKTV------DKKIVRTEIGVLLRLSHPNIIKLKEIFETPT--EISLVLELV 130 (349)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEC----------------CHHHHHCCCTTBCCEEEEEECSS--EEEEEECCC
T ss_pred eEEeeCCCEEEEEEEECCCCcEEEEEEeccch------hHHHHHHHHHHHHhCCCCCCcceeeeEecCC--eEEEEEEeC
Confidence 67999999999999987 68899999985321 2356889999999999999999999999876 899999999
Q ss_pred CCCChhhhhhcC
Q 012224 443 SNGTLYEHLHCK 454 (468)
Q Consensus 443 ~~GsL~~~L~~~ 454 (468)
++|+|.+++..+
T Consensus 131 ~~~~L~~~l~~~ 142 (349)
T 2w4o_A 131 TGGELFDRIVEK 142 (349)
T ss_dssp CSCBHHHHHTTC
T ss_pred CCCCHHHHHHhc
Confidence 999999999764
No 219
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=99.13 E-value=1.4e-10 Score=112.33 Aligned_cols=89 Identities=22% Similarity=0.244 Sum_probs=74.0
Q ss_pred hHhccCCceEEEEEEEC-----CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEE
Q 012224 364 NIIGSSPDSLVYKGTMK-----GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-----~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv 438 (468)
+.||+|+||.||++.+. +|+.||||++.... .....+.|.+|++++.+++|+||+++++++.+.+....++|
T Consensus 37 ~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 113 (318)
T 3lxp_A 37 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADA---GPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLV 113 (318)
T ss_dssp EEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTC---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEE
T ss_pred heecCCCCeEEEEEEEccCCCCCCcEEEEEEecccc---ChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEE
Confidence 67999999999999763 67889999985321 22346789999999999999999999999987543368999
Q ss_pred EEecCCCChhhhhhcCC
Q 012224 439 FDYASNGTLYEHLHCKS 455 (468)
Q Consensus 439 ~ey~~~GsL~~~L~~~~ 455 (468)
|||+++|+|.+++....
T Consensus 114 ~e~~~~~~L~~~l~~~~ 130 (318)
T 3lxp_A 114 MEYVPLGSLRDYLPRHS 130 (318)
T ss_dssp ECCCTTCBHHHHGGGSC
T ss_pred EecccCCcHHHHHhhCC
Confidence 99999999999997653
No 220
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=99.13 E-value=6.1e-11 Score=116.54 Aligned_cols=90 Identities=20% Similarity=0.217 Sum_probs=74.0
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEec
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~ 442 (468)
+.||+|+||.||+|... +|+.||||++...... .....++|.+|++++.+++|+|||+++++|.+.+ ..++||||+
T Consensus 60 ~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~lv~e~~ 136 (348)
T 1u5q_A 60 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQ-SNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREH--TAWLVMEYC 136 (348)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEESCSSC-HHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEEECC
T ss_pred eEEccCCCEEEEEEEEccCCeEEEEEEEcccccc-chHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC--eEEEEEecC
Confidence 67999999999999874 7899999998543221 2233567999999999999999999999998876 899999999
Q ss_pred CCCChhhhhhcCCCC
Q 012224 443 SNGTLYEHLHCKSSS 457 (468)
Q Consensus 443 ~~GsL~~~L~~~~~~ 457 (468)
+ |+|.+++......
T Consensus 137 ~-g~l~~~l~~~~~~ 150 (348)
T 1u5q_A 137 L-GSASDLLEVHKKP 150 (348)
T ss_dssp S-EEHHHHHHHHTSC
T ss_pred C-CCHHHHHHHhcCC
Confidence 7 7899988654433
No 221
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=99.13 E-value=1.4e-10 Score=110.06 Aligned_cols=89 Identities=26% Similarity=0.287 Sum_probs=75.3
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccc--cchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEE
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEH--WTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~--~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~e 440 (468)
+.||+|+||.||++... +|+.||||.+...... ......+.|.+|++++.+++|+||+++++++.... ..++|||
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e 88 (283)
T 3bhy_A 11 EELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKT--DVVLILE 88 (283)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEEE
T ss_pred HhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCC--eEEEEEe
Confidence 78999999999999987 7899999998654311 11123578999999999999999999999999876 8999999
Q ss_pred ecCCCChhhhhhcC
Q 012224 441 YASNGTLYEHLHCK 454 (468)
Q Consensus 441 y~~~GsL~~~L~~~ 454 (468)
|+++|+|.+++..+
T Consensus 89 ~~~~~~L~~~l~~~ 102 (283)
T 3bhy_A 89 LVSGGELFDFLAEK 102 (283)
T ss_dssp CCCSCBHHHHHHHH
T ss_pred ecCCCcHHHHHHhc
Confidence 99999999999653
No 222
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=99.12 E-value=1.5e-10 Score=112.26 Aligned_cols=89 Identities=25% Similarity=0.287 Sum_probs=75.5
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeeccccc--chhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEE
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHW--TGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~--~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~e 440 (468)
+.||+|+||.||+|... +|+.||||.+....... .....++|.+|++++.+++|+||+++++++.+.. ..++|+|
T Consensus 18 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e 95 (321)
T 2a2a_A 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRT--DVVLILE 95 (321)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEEC
T ss_pred eEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCC--EEEEEEE
Confidence 78999999999999886 78999999986543211 1123568999999999999999999999998876 8999999
Q ss_pred ecCCCChhhhhhcC
Q 012224 441 YASNGTLYEHLHCK 454 (468)
Q Consensus 441 y~~~GsL~~~L~~~ 454 (468)
|+++|+|.+++...
T Consensus 96 ~~~~~~L~~~l~~~ 109 (321)
T 2a2a_A 96 LVSGGELFDFLAQK 109 (321)
T ss_dssp CCCSCBHHHHHHTC
T ss_pred cCCCCcHHHHHHhc
Confidence 99999999999754
No 223
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=99.12 E-value=6.4e-11 Score=117.87 Aligned_cols=88 Identities=15% Similarity=0.054 Sum_probs=74.7
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEec
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~ 442 (468)
+.||+|+||.||++... +|+.||+|.+.... .......+.+.+|++++.+++|+|||++++++.+.+ ..++|+||+
T Consensus 21 ~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~-~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~--~~~lv~e~~ 97 (384)
T 4fr4_A 21 RAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQK-CVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEE--DMFMVVDLL 97 (384)
T ss_dssp EEEECCTTCCEEEEEETTTCCEEEEEEEEHHH-HHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEEEECCC
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEehhh-cccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC--EEEEEEecC
Confidence 78999999999999876 68899999985332 111223567899999999999999999999999877 899999999
Q ss_pred CCCChhhhhhcC
Q 012224 443 SNGTLYEHLHCK 454 (468)
Q Consensus 443 ~~GsL~~~L~~~ 454 (468)
++|+|.+++...
T Consensus 98 ~gg~L~~~l~~~ 109 (384)
T 4fr4_A 98 LGGDLRYHLQQN 109 (384)
T ss_dssp TTEEHHHHHHTT
T ss_pred CCCcHHHHHHhc
Confidence 999999999754
No 224
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=99.12 E-value=5.3e-11 Score=123.86 Aligned_cols=83 Identities=23% Similarity=0.304 Sum_probs=72.4
Q ss_pred hHhccCCceEEEEEEECCCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEecC
Q 012224 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~~ 443 (468)
+.||+|+||.||+|.+.++..||||++..... ..++|.+|+++|.+++|+|||+++++|.+ + ..++|||||+
T Consensus 273 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-----~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~--~~~lv~e~~~ 344 (535)
T 2h8h_A 273 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-----SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-E--PIYIVTEYMS 344 (535)
T ss_dssp EEEEECSSEEEEEEEETTTEEEEEEEECTTSS-----CHHHHHHHHHHHHHCCCTTBCCEEEEECS-S--SCEEEECCCT
T ss_pred eecccCCCeEEEEEEECCCceEEEEEeCCCCC-----CHHHHHHHHHHHHhCCCCCEeeEEEEEee-c--cceEeeehhc
Confidence 67999999999999998878899999853321 24689999999999999999999999976 3 5899999999
Q ss_pred CCChhhhhhcC
Q 012224 444 NGTLYEHLHCK 454 (468)
Q Consensus 444 ~GsL~~~L~~~ 454 (468)
+|+|.++|+..
T Consensus 345 ~gsL~~~l~~~ 355 (535)
T 2h8h_A 345 KGSLLDFLKGE 355 (535)
T ss_dssp TEEHHHHHSHH
T ss_pred CCcHHHHHhhc
Confidence 99999999753
No 225
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=99.12 E-value=1.4e-10 Score=115.54 Aligned_cols=87 Identities=15% Similarity=0.154 Sum_probs=75.6
Q ss_pred hHhccC--CceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEE
Q 012224 364 NIIGSS--PDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (468)
Q Consensus 364 ~~lg~G--~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~e 440 (468)
+.||+| +||.||+|... +|+.||||++..... .....+.+.+|++++++++|+|||++++++.+.+ ..++|||
T Consensus 31 ~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~lv~e 106 (389)
T 3gni_B 31 TVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEAC--SNEMVTFLQGELHVSKLFNHPNIVPYRATFIADN--ELWVVTS 106 (389)
T ss_dssp EEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGS--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEEE
T ss_pred ecccCCcCCceEEEEEEEcCCCCEEEEEEeccccc--ChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECC--EEEEEEE
Confidence 679999 99999999987 799999999964322 2234567889999999999999999999999877 8999999
Q ss_pred ecCCCChhhhhhcC
Q 012224 441 YASNGTLYEHLHCK 454 (468)
Q Consensus 441 y~~~GsL~~~L~~~ 454 (468)
||++|+|.+++...
T Consensus 107 ~~~~~~L~~~l~~~ 120 (389)
T 3gni_B 107 FMAYGSAKDLICTH 120 (389)
T ss_dssp CCTTCBHHHHHHHT
T ss_pred ccCCCCHHHHHhhh
Confidence 99999999999764
No 226
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=99.12 E-value=6.8e-11 Score=114.91 Aligned_cols=92 Identities=22% Similarity=0.252 Sum_probs=74.0
Q ss_pred hHhccCCceEEEEEEE-----CCCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEE
Q 012224 364 NIIGSSPDSLVYKGTM-----KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~-----~~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv 438 (468)
+.||+|+||.||++.+ .+|+.||||++.... ....+.|.+|++++.+++|+||+++++++...+....++|
T Consensus 47 ~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 122 (326)
T 2w1i_A 47 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST----EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLI 122 (326)
T ss_dssp EEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCC----SHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCEEE
T ss_pred eeeccCCCeEEEEEEeccccCCCceEEEEEEeccCC----HHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceEEE
Confidence 6899999999999985 268899999985322 2345689999999999999999999999876543357899
Q ss_pred EEecCCCChhhhhhcCCCCcc
Q 012224 439 FDYASNGTLYEHLHCKSSSLY 459 (468)
Q Consensus 439 ~ey~~~GsL~~~L~~~~~~~~ 459 (468)
+||+++|+|.+++......+.
T Consensus 123 ~e~~~~~~L~~~l~~~~~~~~ 143 (326)
T 2w1i_A 123 MEYLPYGSLRDYLQKHKERID 143 (326)
T ss_dssp ECCCTTCBHHHHHHHSTTSSC
T ss_pred EECCCCCCHHHHHHhcccCCC
Confidence 999999999999987654443
No 227
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=99.12 E-value=1.3e-10 Score=109.99 Aligned_cols=85 Identities=20% Similarity=0.174 Sum_probs=73.5
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEec
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~ 442 (468)
+.||+|+||.||+|... ++..+|+|++..... ...+.|.+|++++.+++|+||+++++++.+.. ..++||||+
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 88 (277)
T 3f3z_A 15 NTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV----EDVDRFKQEIEIMKSLDHPNIIRLYETFEDNT--DIYLVMELC 88 (277)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC----SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEEEEECC
T ss_pred eEEeecCCEEEEEEEeCCCCcEEEEEeehhhcc----chHHHHHHHHHHHHhCCCCCEeeEEEEEecCC--eEEEEEecc
Confidence 78999999999999886 678899999854322 23567999999999999999999999999876 899999999
Q ss_pred CCCChhhhhhcC
Q 012224 443 SNGTLYEHLHCK 454 (468)
Q Consensus 443 ~~GsL~~~L~~~ 454 (468)
++|+|.+++..+
T Consensus 89 ~~~~L~~~~~~~ 100 (277)
T 3f3z_A 89 TGGELFERVVHK 100 (277)
T ss_dssp CSCBHHHHHHHH
T ss_pred CCCcHHHHHHHc
Confidence 999999998753
No 228
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=99.12 E-value=1.1e-10 Score=114.47 Aligned_cols=88 Identities=18% Similarity=0.128 Sum_probs=74.1
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcC-CCCCccceeeEEEcCCCCcEEEEEEe
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDY 441 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l-~H~nlv~l~g~~~~~~~~~~~lv~ey 441 (468)
+.||+|+||.||+++.. +|+.||||++..... ......+.+.+|.+++.++ +|+|||++++++.+.+ ..++||||
T Consensus 15 ~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~--~~~lv~e~ 91 (345)
T 3a8x_A 15 RVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELV-NDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTES--RLFFVIEY 91 (345)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEEGGGS-CSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--EEEEEECC
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEhHHh-cchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCC--EEEEEEeC
Confidence 68999999999999986 688999999854321 1223456788999999988 8999999999998876 89999999
Q ss_pred cCCCChhhhhhcC
Q 012224 442 ASNGTLYEHLHCK 454 (468)
Q Consensus 442 ~~~GsL~~~L~~~ 454 (468)
+++|+|.+++...
T Consensus 92 ~~gg~L~~~l~~~ 104 (345)
T 3a8x_A 92 VNGGDLMFHMQRQ 104 (345)
T ss_dssp CCSCBHHHHHHHH
T ss_pred CCCCcHHHHHHHc
Confidence 9999999999753
No 229
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=99.12 E-value=1.5e-10 Score=111.65 Aligned_cols=85 Identities=22% Similarity=0.300 Sum_probs=72.7
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcC-CCCCccceeeEEEcCCCCcEEEEEEe
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDY 441 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l-~H~nlv~l~g~~~~~~~~~~~lv~ey 441 (468)
++||+|+||.||+|... +|+.||||++..... ...+.+.+|++++.++ +|+||+++++++.+.+ ..++||||
T Consensus 19 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~--~~~lv~e~ 92 (316)
T 2ac3_A 19 DVLGEGAHARVQTCINLITSQEYAVKIIEKQPG----HIRSRVFREVEMLYQCQGHRNVLELIEFFEEED--RFYLVFEK 92 (316)
T ss_dssp CCCCCCSSEEEEEEECSSSCCEEEEEEEECCSS----CCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT--EEEEEEEC
T ss_pred ceecCCceEEEEEEEEcCCCcEEEEEEEeeCcc----hhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCC--EEEEEEEc
Confidence 46999999999999865 799999999854321 2356789999999985 7999999999999876 89999999
Q ss_pred cCCCChhhhhhcC
Q 012224 442 ASNGTLYEHLHCK 454 (468)
Q Consensus 442 ~~~GsL~~~L~~~ 454 (468)
+++|+|.++++..
T Consensus 93 ~~~~~L~~~l~~~ 105 (316)
T 2ac3_A 93 MRGGSILSHIHKR 105 (316)
T ss_dssp CTTCBHHHHHHHH
T ss_pred CCCCcHHHHHhcc
Confidence 9999999999754
No 230
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=99.12 E-value=1.8e-10 Score=109.29 Aligned_cols=87 Identities=20% Similarity=0.174 Sum_probs=74.9
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcC-CCCCccceeeEEEcCCCCcEEEEEEe
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDY 441 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l-~H~nlv~l~g~~~~~~~~~~~lv~ey 441 (468)
+.||+|+||.||+|... +++.||||++..... ......++.+|+..+.++ +|+||+++++++.+.+ ..++|+||
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~--~~~lv~e~ 92 (289)
T 1x8b_A 17 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLA--GSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDD--HMLIQNEY 92 (289)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECCCT--TSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETT--EEEEEEEC
T ss_pred hhhcCCCceEEEEEEEcCCCceEEEEEeccccc--ccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCC--eEEEEEEe
Confidence 78999999999999986 799999999854322 123456889999999999 9999999999998876 89999999
Q ss_pred cCCCChhhhhhcC
Q 012224 442 ASNGTLYEHLHCK 454 (468)
Q Consensus 442 ~~~GsL~~~L~~~ 454 (468)
+++|+|.+++...
T Consensus 93 ~~~~~L~~~l~~~ 105 (289)
T 1x8b_A 93 CNGGSLADAISEN 105 (289)
T ss_dssp CTTCBHHHHHHHH
T ss_pred cCCCcHHHHHHhh
Confidence 9999999999753
No 231
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=99.11 E-value=1.3e-10 Score=110.84 Aligned_cols=86 Identities=20% Similarity=0.274 Sum_probs=73.1
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEec
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~ 442 (468)
.+||+|+||.||+|... ++..||||.+..... ...+.|.+|++++.+++|+||+++++++...+ ..++|+||+
T Consensus 28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~ 101 (295)
T 2clq_A 28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDS----RYSQPLHEEIALHKHLKHKNIVQYLGSFSENG--FIKIFMEQV 101 (295)
T ss_dssp CEEEECSSSEEEEEEETTTCCEEEEEEEECCCC-------HHHHHHHHHHHTCCCTTBCCEEEEEEETT--EEEEEEECC
T ss_pred EEEeecCcEEEEEEEECCCCeEEEEEEccCCch----HHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCC--cEEEEEEeC
Confidence 47999999999999875 788999999854321 23567999999999999999999999998876 789999999
Q ss_pred CCCChhhhhhcCC
Q 012224 443 SNGTLYEHLHCKS 455 (468)
Q Consensus 443 ~~GsL~~~L~~~~ 455 (468)
++|+|.+++....
T Consensus 102 ~~~~L~~~l~~~~ 114 (295)
T 2clq_A 102 PGGSLSALLRSKW 114 (295)
T ss_dssp SEEEHHHHHHHTT
T ss_pred CCCCHHHHHHhhc
Confidence 9999999998653
No 232
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=99.11 E-value=9.2e-11 Score=115.35 Aligned_cols=88 Identities=19% Similarity=0.124 Sum_probs=74.6
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEec
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~ 442 (468)
+.||+|+||.||+++.. +|+.||||++..... ......+.+.+|++++.+++|+||+++++++.+.+ ..++||||+
T Consensus 47 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~e~~ 123 (350)
T 1rdq_E 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYV 123 (350)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHH-HHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEEEECC
T ss_pred EEeecCcCcEEEEEEECCCCCEEEEEEEEhHHh-ccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCC--EEEEEEcCC
Confidence 68999999999999986 799999999854321 11123567899999999999999999999999876 899999999
Q ss_pred CCCChhhhhhcC
Q 012224 443 SNGTLYEHLHCK 454 (468)
Q Consensus 443 ~~GsL~~~L~~~ 454 (468)
++|+|.+++...
T Consensus 124 ~gg~L~~~l~~~ 135 (350)
T 1rdq_E 124 AGGEMFSHLRRI 135 (350)
T ss_dssp TTCBHHHHHHHH
T ss_pred CCCcHHHHHHHc
Confidence 999999999753
No 233
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=99.11 E-value=1.1e-10 Score=110.46 Aligned_cols=88 Identities=19% Similarity=0.152 Sum_probs=73.7
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEec
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~ 442 (468)
+.||+|+||.||++... +|+.||+|.+..... .....+.|.+|++++.+++|+||+++++++........++||||+
T Consensus 12 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~ 89 (279)
T 2w5a_A 12 YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSM--TEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYC 89 (279)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEECTTC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEEECC
T ss_pred hhccCCCCcEEEEEEECCCCcEEEEEEEEcccC--CHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEEeCC
Confidence 67999999999999886 789999999864332 223467899999999999999999999988653323689999999
Q ss_pred CCCChhhhhhc
Q 012224 443 SNGTLYEHLHC 453 (468)
Q Consensus 443 ~~GsL~~~L~~ 453 (468)
++|+|.+++..
T Consensus 90 ~~~~L~~~l~~ 100 (279)
T 2w5a_A 90 EGGDLASVITK 100 (279)
T ss_dssp TTEEHHHHHHH
T ss_pred CCCCHHHHHHh
Confidence 99999999974
No 234
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=99.11 E-value=8.8e-11 Score=115.75 Aligned_cols=86 Identities=16% Similarity=0.169 Sum_probs=74.9
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEec
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~ 442 (468)
+.||+|+||.||++... +|..||+|++.... .....+.+.+|++++.+++|+||+++++++...+ ..++||||+
T Consensus 39 ~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~ 113 (360)
T 3eqc_A 39 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEI---KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG--EISICMEHM 113 (360)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEECCC---CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETT--EEEEEECCC
T ss_pred eeecCCCCeEEEEEEECCCCcEEEEEEecccc---CHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECC--EEEEEEECC
Confidence 68999999999999986 78999999985432 2234578999999999999999999999998876 899999999
Q ss_pred CCCChhhhhhcC
Q 012224 443 SNGTLYEHLHCK 454 (468)
Q Consensus 443 ~~GsL~~~L~~~ 454 (468)
++|+|.++++..
T Consensus 114 ~~~~L~~~l~~~ 125 (360)
T 3eqc_A 114 DGGSLDQVLKKA 125 (360)
T ss_dssp TTCBHHHHHHHH
T ss_pred CCCCHHHHHHHc
Confidence 999999999754
No 235
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=99.11 E-value=9.6e-11 Score=112.85 Aligned_cols=87 Identities=25% Similarity=0.294 Sum_probs=73.4
Q ss_pred hHhccCCceEEEEEEE------CCCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEE
Q 012224 364 NIIGSSPDSLVYKGTM------KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~------~~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~l 437 (468)
+.||+|+||.||+|.. .++..||||.+.... .....+.+.+|++++.+++|+||+++++++.+.+ ..++
T Consensus 29 ~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~l 103 (314)
T 2ivs_A 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA---SPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDG--PLLL 103 (314)
T ss_dssp EEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS--SCEE
T ss_pred eeecccCCeeEEEEEEeccCcccCcceEEEEeccCCC---CHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCC--ceEE
Confidence 6799999999999986 245789999985321 2234578999999999999999999999998876 7899
Q ss_pred EEEecCCCChhhhhhcCC
Q 012224 438 VFDYASNGTLYEHLHCKS 455 (468)
Q Consensus 438 v~ey~~~GsL~~~L~~~~ 455 (468)
|+||+++|+|.++++...
T Consensus 104 v~e~~~~~~L~~~l~~~~ 121 (314)
T 2ivs_A 104 IVEYAKYGSLRGFLRESR 121 (314)
T ss_dssp EEECCTTCBHHHHHHHTT
T ss_pred EEeecCCCCHHHHHHHHh
Confidence 999999999999998643
No 236
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=99.11 E-value=9.1e-11 Score=112.44 Aligned_cols=89 Identities=21% Similarity=0.205 Sum_probs=73.5
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEec
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~ 442 (468)
+.||+|+||.||+|... +|..+|+|.+..... ...+.|.+|++++.+++|+||+++++++...+ ..++|+||+
T Consensus 25 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 98 (302)
T 2j7t_A 25 GELGDGAFGKVYKAKNKETGALAAAKVIETKSE----EELEDYIVEIEILATCDHPYIVKLLGAYYHDG--KLWIMIEFC 98 (302)
T ss_dssp EEEECSTTCCEEEEEETTTCCEEEEEEEC--------CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC---CEEEEEECC
T ss_pred ceeccCCCeEEEEEEEcCCCcEEEEEEecCCCH----HHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCC--eEEEEEEeC
Confidence 67999999999999987 689999999854322 23568999999999999999999999998876 799999999
Q ss_pred CCCChhhhhhcCCCCc
Q 012224 443 SNGTLYEHLHCKSSSL 458 (468)
Q Consensus 443 ~~GsL~~~L~~~~~~~ 458 (468)
++|+|.+++......+
T Consensus 99 ~~~~l~~~~~~~~~~~ 114 (302)
T 2j7t_A 99 PGGAVDAIMLELDRGL 114 (302)
T ss_dssp TTEEHHHHHHHHTSCC
T ss_pred CCCcHHHHHHhhccCC
Confidence 9999999987644433
No 237
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=99.11 E-value=1.3e-10 Score=112.45 Aligned_cols=84 Identities=23% Similarity=0.322 Sum_probs=64.3
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEec
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~ 442 (468)
+.||+|+||.||+|... +|+.||||++...... ...+.+.+|++++.+++|+|||++++++...+ ..++||||+
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~e~~ 85 (317)
T 2pmi_A 11 EKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEE---GTPSTAIREISLMKELKHENIVRLYDVIHTEN--KLTLVFEFM 85 (317)
T ss_dssp --------CEEEEEECSSSCCEEEEEEEECCSTT---CSCHHHHHHHHHHTTCCBTTBCCEEEEECCTT--EEEEEEECC
T ss_pred eEECCCCCEEEEEEEECCCCcEEEEEEeeccccc---ccHHHHHHHHHHHHhcCCCCcceEEEEEEECC--eEEEEEEec
Confidence 78999999999999876 7899999998643311 22357889999999999999999999998876 899999999
Q ss_pred CCCChhhhhhc
Q 012224 443 SNGTLYEHLHC 453 (468)
Q Consensus 443 ~~GsL~~~L~~ 453 (468)
+ |+|.+++..
T Consensus 86 ~-~~L~~~l~~ 95 (317)
T 2pmi_A 86 D-NDLKKYMDS 95 (317)
T ss_dssp C-CBHHHHHHH
T ss_pred C-CCHHHHHHh
Confidence 8 699999864
No 238
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=99.10 E-value=1.7e-10 Score=108.87 Aligned_cols=86 Identities=22% Similarity=0.303 Sum_probs=74.4
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEec
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~ 442 (468)
+.||+|+||.||+|... +|+.||||.+..... ....+.+.+|++++.+++|+||+++++++.+.+ ..++|+||+
T Consensus 13 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 87 (276)
T 2yex_A 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA---VDCPENIKKEICINKMLNHENVVKFYGHRREGN--IQYLFLEYC 87 (276)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEEGGGC---TTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT--EEEEEEECC
T ss_pred EEeecCCCcEEEEEEECCCCcEEEEEEeeeccc---hhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCC--EEEEEEEec
Confidence 78999999999999986 789999999854332 123568999999999999999999999998876 789999999
Q ss_pred CCCChhhhhhcC
Q 012224 443 SNGTLYEHLHCK 454 (468)
Q Consensus 443 ~~GsL~~~L~~~ 454 (468)
++|+|.+++...
T Consensus 88 ~~~~L~~~l~~~ 99 (276)
T 2yex_A 88 SGGELFDRIEPD 99 (276)
T ss_dssp TTEEGGGGSBTT
T ss_pred CCCcHHHHHhhc
Confidence 999999999653
No 239
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=99.10 E-value=7.6e-11 Score=117.35 Aligned_cols=87 Identities=24% Similarity=0.266 Sum_probs=72.9
Q ss_pred hHhccCCceEEEEEEEC--------CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcC-CCCCccceeeEEEcCCCCc
Q 012224 364 NIIGSSPDSLVYKGTMK--------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFT 434 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~--------~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l-~H~nlv~l~g~~~~~~~~~ 434 (468)
+.||+|+||.||+|+.. .+..||||++.... .....+.+.+|++++.++ +|+|||+++++|...+ .
T Consensus 75 ~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~--~ 149 (382)
T 3tt0_A 75 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA---TEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG--P 149 (382)
T ss_dssp EEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTC---CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--S
T ss_pred eEEecCCCeEEEEEEEccccccccccceEEEEEeecccc---CHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCC--c
Confidence 67999999999999862 33579999985322 223457899999999999 9999999999998876 7
Q ss_pred EEEEEEecCCCChhhhhhcCC
Q 012224 435 RMLVFDYASNGTLYEHLHCKS 455 (468)
Q Consensus 435 ~~lv~ey~~~GsL~~~L~~~~ 455 (468)
.++||||+++|+|.+++....
T Consensus 150 ~~lv~e~~~~g~L~~~l~~~~ 170 (382)
T 3tt0_A 150 LYVIVEYASKGNLREYLQARR 170 (382)
T ss_dssp CEEEEECCTTCBHHHHHHHTC
T ss_pred eEEEEEecCCCcHHHHHHHhc
Confidence 899999999999999998653
No 240
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=99.10 E-value=1.3e-10 Score=110.02 Aligned_cols=83 Identities=20% Similarity=0.289 Sum_probs=71.8
Q ss_pred hHhccCCceEEEEEEECCCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEecC
Q 012224 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~~ 443 (468)
+.||+|+||.||+|...++..||||.+..... ..+.|.+|++++.+++|+||+++++++.+. ..++|+||++
T Consensus 19 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~~~~v~e~~~ 90 (279)
T 1qpc_A 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-----SPDAFLAEANLMKQLQHQRLVRLYAVVTQE---PIYIITEYME 90 (279)
T ss_dssp EEEEEETTEEEEEEEETTTEEEEEEEECTTSS-----CHHHHHHHHHHHHHCCCTTBCCEEEEECSS---SCEEEEECCT
T ss_pred eeecCCCCeEEEEEEEcCCcEEEEEEecCCcc-----cHHHHHHHHHHHHhCCCcCcceEEEEEcCC---CcEEEEecCC
Confidence 67999999999999998888899999853321 246799999999999999999999998753 5899999999
Q ss_pred CCChhhhhhcC
Q 012224 444 NGTLYEHLHCK 454 (468)
Q Consensus 444 ~GsL~~~L~~~ 454 (468)
+|+|.+++...
T Consensus 91 ~~~L~~~l~~~ 101 (279)
T 1qpc_A 91 NGSLVDFLKTP 101 (279)
T ss_dssp TCBHHHHTTSH
T ss_pred CCCHHHHHhcC
Confidence 99999999753
No 241
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=99.10 E-value=1e-10 Score=111.28 Aligned_cols=84 Identities=25% Similarity=0.338 Sum_probs=73.5
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEec
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~ 442 (468)
+.||+|+||.||+|... ++..||||.+.... ...+.|.+|++++.+++|+||+++++++.+.. ..++||||+
T Consensus 19 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~~v~e~~ 91 (288)
T 3kfa_A 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-----MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP--PFYIITEFM 91 (288)
T ss_dssp EESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-----THHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--SEEEEEECC
T ss_pred eecCCCCceeEEEeEecCCCEEEEEEecCcCH-----HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCC--CEEEEEEcC
Confidence 67999999999999987 58889999984322 23568999999999999999999999998876 789999999
Q ss_pred CCCChhhhhhcC
Q 012224 443 SNGTLYEHLHCK 454 (468)
Q Consensus 443 ~~GsL~~~L~~~ 454 (468)
++|+|.++++..
T Consensus 92 ~~~~L~~~~~~~ 103 (288)
T 3kfa_A 92 TYGNLLDYLREC 103 (288)
T ss_dssp TTEEHHHHHHHC
T ss_pred CCCcHHHHHHhc
Confidence 999999999764
No 242
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=99.10 E-value=6.5e-11 Score=115.20 Aligned_cols=90 Identities=22% Similarity=0.300 Sum_probs=68.4
Q ss_pred hHhccCCceEEEEEEEC-CCCe----EEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEE
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPE----IAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~----vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv 438 (468)
+.||+|+||.||+|... +|.. ||+|.+.... .....++|.+|++++++++|+|||+++++|... ..++|
T Consensus 21 ~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---~~~~v 94 (327)
T 3poz_A 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMASVDNPHVCRLLGICLTS---TVQLI 94 (327)
T ss_dssp EEEEEETTEEEEEEEECC----CCEEEEEEEC----------CHHHHHHHHHHHHHCCBTTBCCEEEEEESS---SEEEE
T ss_pred eEEeeCCCeEEEEEEEcCCCceEEEEEEEeeccccc---CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC---CeEEE
Confidence 68999999999999864 5554 4777663221 123457899999999999999999999999875 47899
Q ss_pred EEecCCCChhhhhhcCCCCcc
Q 012224 439 FDYASNGTLYEHLHCKSSSLY 459 (468)
Q Consensus 439 ~ey~~~GsL~~~L~~~~~~~~ 459 (468)
+||+++|+|.++++.....+.
T Consensus 95 ~e~~~~g~L~~~l~~~~~~~~ 115 (327)
T 3poz_A 95 TQLMPFGCLLDYVREHKDNIG 115 (327)
T ss_dssp EECCTTCBHHHHHHHSTTSCC
T ss_pred EEecCCCcHHHHHHhcCCCCC
Confidence 999999999999987655443
No 243
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=99.09 E-value=1.4e-10 Score=123.05 Aligned_cols=86 Identities=22% Similarity=0.256 Sum_probs=71.7
Q ss_pred hHhccCCceEEEEEEEC---CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEE
Q 012224 364 NIIGSSPDSLVYKGTMK---GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~---~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~e 440 (468)
+.||+|+||.||+|.+. .++.||||++..... .....++|.+|++++.+++|+|||+++++|... ..++|||
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~---~~~lv~E 449 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN--DPALKDELLAEANVMQQLDNPYIVRMIGICEAE---SWMLVME 449 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGG--CGGGHHHHHHHHHHHHHCCCTTBCCEEEEEESS---SEEEEEE
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC---CEEEEEE
Confidence 46999999999999764 467899999854321 223467899999999999999999999999754 5889999
Q ss_pred ecCCCChhhhhhcC
Q 012224 441 YASNGTLYEHLHCK 454 (468)
Q Consensus 441 y~~~GsL~~~L~~~ 454 (468)
||++|+|.++|+..
T Consensus 450 ~~~~g~L~~~l~~~ 463 (635)
T 4fl3_A 450 MAELGPLNKYLQQN 463 (635)
T ss_dssp CCTTEEHHHHHHHC
T ss_pred ccCCCCHHHHHhhC
Confidence 99999999999754
No 244
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=99.09 E-value=2.5e-10 Score=109.03 Aligned_cols=88 Identities=9% Similarity=0.053 Sum_probs=74.4
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEec
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~ 442 (468)
+.||+|+||.||++... +++.+|+|.+..... ......+.|.+|++++.+++|+||+++++++.+.+ ..++|+||+
T Consensus 21 ~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~ 97 (294)
T 2rku_A 21 RFLGKGGFAKCFEISDADTKEVFAGKIVPKSLL-LKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDND--FVFVVLELC 97 (294)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC-CSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEEEEECC
T ss_pred EEEeecCCEEEEEEEECCCCceEEEEEechhhc-cCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCC--EEEEEEecC
Confidence 67999999999999987 688899999854321 12334668999999999999999999999999876 789999999
Q ss_pred CCCChhhhhhcC
Q 012224 443 SNGTLYEHLHCK 454 (468)
Q Consensus 443 ~~GsL~~~L~~~ 454 (468)
++|+|.+++...
T Consensus 98 ~~~~L~~~~~~~ 109 (294)
T 2rku_A 98 RRRSLLELHKRR 109 (294)
T ss_dssp TTCBHHHHHHHH
T ss_pred CCCCHHHHHHhc
Confidence 999999988643
No 245
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=99.09 E-value=1e-10 Score=111.86 Aligned_cols=92 Identities=26% Similarity=0.288 Sum_probs=71.9
Q ss_pred hHhccCCceEEEEEEECC--C--CeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEE
Q 012224 364 NIIGSSPDSLVYKGTMKG--G--PEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~~--g--~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ 439 (468)
+.||+|+||.||+|...+ + ..+|||.+.... .....+.|.+|++++++++|+||++++++|.+.+ ...++|+
T Consensus 31 ~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~~~v~ 106 (298)
T 3f66_A 31 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT---DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSE-GSPLVVL 106 (298)
T ss_dssp EEEEEETTEEEEEEEEC-----CEEEEEEEETTCC---SHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSS-SCCEEEE
T ss_pred ceeeecCCceEEEEEEecCCCceeEEEEEecccCC---CHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCC-CceEEEE
Confidence 689999999999998742 2 257888874221 2234568999999999999999999999986543 2578999
Q ss_pred EecCCCChhhhhhcCCCCcc
Q 012224 440 DYASNGTLYEHLHCKSSSLY 459 (468)
Q Consensus 440 ey~~~GsL~~~L~~~~~~~~ 459 (468)
||+++|+|.++++.....+.
T Consensus 107 e~~~~~~L~~~l~~~~~~~~ 126 (298)
T 3f66_A 107 PYMKHGDLRNFIRNETHNPT 126 (298)
T ss_dssp ECCTTCBHHHHHHCTTCCCC
T ss_pred eCCCCCCHHHHHHhcccCCC
Confidence 99999999999987555443
No 246
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=99.09 E-value=9.6e-11 Score=112.83 Aligned_cols=87 Identities=23% Similarity=0.275 Sum_probs=73.9
Q ss_pred hHhccCCceEEEEEEE------CCCCeEEEEEEeecccccchhhHHHHHHHHHHHhcC-CCCCccceeeEEEcCCCCcEE
Q 012224 364 NIIGSSPDSLVYKGTM------KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRM 436 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~------~~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l-~H~nlv~l~g~~~~~~~~~~~ 436 (468)
+.||+|+||.||+|+. .+++.||||.+.... .....+.|.+|++++.++ +|+||++++++|...+ ..+
T Consensus 29 ~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~--~~~ 103 (313)
T 1t46_A 29 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA---HLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG--PTL 103 (313)
T ss_dssp EEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC---CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--SCE
T ss_pred HhhCccCCcceEEEEEeeccccchhhhhHHHhcCcch---hHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCC--CcE
Confidence 6899999999999985 256789999985332 123457899999999999 9999999999998876 789
Q ss_pred EEEEecCCCChhhhhhcCC
Q 012224 437 LVFDYASNGTLYEHLHCKS 455 (468)
Q Consensus 437 lv~ey~~~GsL~~~L~~~~ 455 (468)
+|+||+++|+|.++++...
T Consensus 104 lv~e~~~~~~L~~~l~~~~ 122 (313)
T 1t46_A 104 VITEYCCYGDLLNFLRRKR 122 (313)
T ss_dssp EEEECCTTEEHHHHHHHTT
T ss_pred EEEecCCCCCHHHHHHhcc
Confidence 9999999999999998654
No 247
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=99.09 E-value=6.1e-11 Score=117.68 Aligned_cols=92 Identities=26% Similarity=0.288 Sum_probs=72.8
Q ss_pred hHhccCCceEEEEEEEC--CC--CeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEE
Q 012224 364 NIIGSSPDSLVYKGTMK--GG--PEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~--~g--~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ 439 (468)
+.||+|+||.||+|... ++ ..||||.+.... .....+.|.+|++++.+++|+|||+++++|.+.+ ...++|+
T Consensus 95 ~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~-~~~~lv~ 170 (373)
T 3c1x_A 95 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT---DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSE-GSPLVVL 170 (373)
T ss_dssp EEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCS---CSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCS-SCCEEEE
T ss_pred cEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCC---CHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-CCeEEEE
Confidence 67999999999999874 22 357888874321 2234678999999999999999999999986543 2578999
Q ss_pred EecCCCChhhhhhcCCCCcc
Q 012224 440 DYASNGTLYEHLHCKSSSLY 459 (468)
Q Consensus 440 ey~~~GsL~~~L~~~~~~~~ 459 (468)
||+++|+|.++++.....+.
T Consensus 171 e~~~~g~L~~~l~~~~~~~~ 190 (373)
T 3c1x_A 171 PYMKHGDLRNFIRNETHNPT 190 (373)
T ss_dssp ECCTTCBHHHHHHCTTCCCB
T ss_pred ECCCCCCHHHHHhhcccCCC
Confidence 99999999999987655443
No 248
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=99.09 E-value=1.2e-10 Score=121.34 Aligned_cols=89 Identities=18% Similarity=0.072 Sum_probs=75.3
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEec
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~ 442 (468)
++||+|+||.||+|... +|+.||||++..... ........+.+|++++.+++|+|||++++++.+.+ ..++||||+
T Consensus 190 ~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~-~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~--~l~lVmEy~ 266 (576)
T 2acx_A 190 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRI-KKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKD--ALCLVLTLM 266 (576)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHH-HHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEECCC
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhh-hhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCC--EEEEEEEcC
Confidence 68999999999999886 799999999854321 11223567899999999999999999999998876 899999999
Q ss_pred CCCChhhhhhcCC
Q 012224 443 SNGTLYEHLHCKS 455 (468)
Q Consensus 443 ~~GsL~~~L~~~~ 455 (468)
++|+|.+++....
T Consensus 267 ~gg~L~~~l~~~~ 279 (576)
T 2acx_A 267 NGGDLKFHIYHMG 279 (576)
T ss_dssp CSCBHHHHHHSSS
T ss_pred CCCcHHHHHHhcC
Confidence 9999999997643
No 249
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=99.09 E-value=9.3e-11 Score=111.80 Aligned_cols=90 Identities=23% Similarity=0.289 Sum_probs=74.7
Q ss_pred hHhccCCceEEEEEEECCCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEecC
Q 012224 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~~ 443 (468)
+.||+|+||.||+|...+|+.||||++...... ....+.+.+|++++.+++|+||+++++++...+ ..++||||++
T Consensus 8 ~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~~ 83 (288)
T 1ob3_A 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKED--EGIPSTTIREISILKELKHSNIVKLYDVIHTKK--RLVLVFEHLD 83 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEEECCSSGG--GCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSS--CEEEEEECCS
T ss_pred hhcccCCCEEEEEEEcCCCCEEEEEEEeccccc--cccchhHHHHHHHHHhcCCCCEeeeeeEEccCC--eEEEEEEecC
Confidence 679999999999999888999999998543221 122467889999999999999999999998876 7999999998
Q ss_pred CCChhhhhhcCCCCc
Q 012224 444 NGTLYEHLHCKSSSL 458 (468)
Q Consensus 444 ~GsL~~~L~~~~~~~ 458 (468)
+ +|.+++......+
T Consensus 84 ~-~l~~~~~~~~~~~ 97 (288)
T 1ob3_A 84 Q-DLKKLLDVCEGGL 97 (288)
T ss_dssp E-EHHHHHHTSTTCC
T ss_pred C-CHHHHHHhcccCC
Confidence 5 9999997654433
No 250
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=99.09 E-value=1.5e-10 Score=112.96 Aligned_cols=87 Identities=24% Similarity=0.264 Sum_probs=72.6
Q ss_pred hHhccCCceEEEEEEEC--------CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcC-CCCCccceeeEEEcCCCCc
Q 012224 364 NIIGSSPDSLVYKGTMK--------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFT 434 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~--------~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l-~H~nlv~l~g~~~~~~~~~ 434 (468)
+.||+|+||.||+|... ++..||||++.... .....+.+.+|++++.++ +|+||++++++|...+ .
T Consensus 41 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~--~ 115 (334)
T 2pvf_A 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA---TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG--P 115 (334)
T ss_dssp EEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTC---CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--C
T ss_pred eEEeecCceeEEEeEeccccccccccceEEEEeeeccCC---cHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCC--c
Confidence 78999999999999863 46789999985322 223456799999999999 9999999999998876 7
Q ss_pred EEEEEEecCCCChhhhhhcCC
Q 012224 435 RMLVFDYASNGTLYEHLHCKS 455 (468)
Q Consensus 435 ~~lv~ey~~~GsL~~~L~~~~ 455 (468)
.++|+||+++|+|.+++....
T Consensus 116 ~~lv~e~~~~~~L~~~l~~~~ 136 (334)
T 2pvf_A 116 LYVIVEYASKGNLREYLRARR 136 (334)
T ss_dssp CEEEEECCTTCBHHHHHHTTS
T ss_pred eEEEEECCCCCcHHHHHHHhc
Confidence 899999999999999998654
No 251
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=99.09 E-value=2.8e-10 Score=109.55 Aligned_cols=87 Identities=22% Similarity=0.231 Sum_probs=72.6
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEec
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~ 442 (468)
+.||+|+||.||+|... +|+.||||++..... ......+.|.+|++++.+++|+||+++++++...+ ..++|+||+
T Consensus 38 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 114 (310)
T 2wqm_A 38 KKIGRGQFSEVYRAACLLDGVPVALKKVQIFDL-MDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDN--ELNIVLELA 114 (310)
T ss_dssp EEEECC--CEEEEEEETTTCCEEEEEEECTTSS-CCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT--EEEEEEECC
T ss_pred EeecCCCCceEEEEEEcCCCceEEEEeeehhhc-cCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC--cEEEEEecC
Confidence 68999999999999875 799999999854321 12334678999999999999999999999999876 899999999
Q ss_pred CCCChhhhhhc
Q 012224 443 SNGTLYEHLHC 453 (468)
Q Consensus 443 ~~GsL~~~L~~ 453 (468)
++|+|.+++..
T Consensus 115 ~~~~L~~~l~~ 125 (310)
T 2wqm_A 115 DAGDLSRMIKH 125 (310)
T ss_dssp CSCBHHHHHHH
T ss_pred CCCCHHHHHHH
Confidence 99999999964
No 252
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=99.08 E-value=1.6e-10 Score=118.32 Aligned_cols=88 Identities=22% Similarity=0.272 Sum_probs=74.6
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEec
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~ 442 (468)
+.||+|+||.||+|+.. +|+.||||++...... .....+.+.+|++++..++|+||+++++++...+ ..++|+||+
T Consensus 22 ~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~--~~~lv~E~~ 98 (476)
T 2y94_A 22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIR-SLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPS--DIFMVMEYV 98 (476)
T ss_dssp EEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHH-HTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEEEECC
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhcc-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC--EEEEEEeCC
Confidence 67999999999999986 7999999998543211 1123467899999999999999999999999876 899999999
Q ss_pred CCCChhhhhhcC
Q 012224 443 SNGTLYEHLHCK 454 (468)
Q Consensus 443 ~~GsL~~~L~~~ 454 (468)
++|+|.+++..+
T Consensus 99 ~gg~L~~~l~~~ 110 (476)
T 2y94_A 99 SGGELFDYICKN 110 (476)
T ss_dssp SSEEHHHHTTSS
T ss_pred CCCcHHHHHHhc
Confidence 999999999754
No 253
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=99.08 E-value=1.1e-10 Score=116.77 Aligned_cols=88 Identities=18% Similarity=0.144 Sum_probs=72.0
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcC-CCCCccceeeEEEcCCCCcEEEEEEe
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDY 441 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l-~H~nlv~l~g~~~~~~~~~~~lv~ey 441 (468)
++||+|+||.||+++.. +++.||||++...... .....+.+.+|..++.++ +|||||++++++.+.+ ..++||||
T Consensus 58 ~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~-~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~--~~~lV~E~ 134 (396)
T 4dc2_A 58 RVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVN-DDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTES--RLFFVIEY 134 (396)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC-----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSS--EEEEEEEC
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhcc-CHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECC--EEEEEEEc
Confidence 78999999999999987 6888999998643211 112234678899999887 8999999999999876 89999999
Q ss_pred cCCCChhhhhhcC
Q 012224 442 ASNGTLYEHLHCK 454 (468)
Q Consensus 442 ~~~GsL~~~L~~~ 454 (468)
+++|+|.+++...
T Consensus 135 ~~gg~L~~~l~~~ 147 (396)
T 4dc2_A 135 VNGGDLMFHMQRQ 147 (396)
T ss_dssp CTTCBHHHHHHHH
T ss_pred CCCCcHHHHHHHc
Confidence 9999999999753
No 254
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=99.08 E-value=1.8e-10 Score=109.99 Aligned_cols=89 Identities=17% Similarity=0.246 Sum_probs=72.8
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEec
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~ 442 (468)
+.||+|+||.||+|... +|+.||||++..... .....+.+.+|++++.+++|+||+++++++.+.+ ..++||||+
T Consensus 8 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~ 83 (292)
T 3o0g_A 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD--DEGVPSSALREICLLKELKHKNIVRLHDVLHSDK--KLTLVFEFC 83 (292)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEESSCS--STTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT--EEEEEEECC
T ss_pred eEecCCCCeEEEEEEECCCCceEEEEeeeccCC--cCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCC--EEEEEEecC
Confidence 67999999999999886 789999999864432 2234567899999999999999999999998876 899999999
Q ss_pred CCCChhhhhhcCCCC
Q 012224 443 SNGTLYEHLHCKSSS 457 (468)
Q Consensus 443 ~~GsL~~~L~~~~~~ 457 (468)
++ ++.+++......
T Consensus 84 ~~-~l~~~~~~~~~~ 97 (292)
T 3o0g_A 84 DQ-DLKKYFDSCNGD 97 (292)
T ss_dssp SE-EHHHHHHHTTTC
T ss_pred CC-CHHHHHHhCCCC
Confidence 85 666666554443
No 255
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=99.08 E-value=1.7e-10 Score=113.62 Aligned_cols=88 Identities=18% Similarity=0.138 Sum_probs=73.7
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcC-CCCCccceeeEEEcCCCCcEEEEEEe
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDY 441 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l-~H~nlv~l~g~~~~~~~~~~~lv~ey 441 (468)
++||+|+||.||+|+.. +|+.||||++..... ......+.+.+|.+++..+ +|+|||++++++.+.+ ..++||||
T Consensus 29 ~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~-~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~--~~~lv~E~ 105 (353)
T 3txo_A 29 RVLGKGSFGKVMLARVKETGDLYAVKVLKKDVI-LQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPD--RLFFVMEF 105 (353)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHH-HHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--EEEEEEEC
T ss_pred EEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHh-cchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCC--EEEEEEeC
Confidence 78999999999999886 789999999853311 1122356788999999988 6999999999999877 89999999
Q ss_pred cCCCChhhhhhcC
Q 012224 442 ASNGTLYEHLHCK 454 (468)
Q Consensus 442 ~~~GsL~~~L~~~ 454 (468)
+++|+|.++++..
T Consensus 106 ~~gg~L~~~l~~~ 118 (353)
T 3txo_A 106 VNGGDLMFHIQKS 118 (353)
T ss_dssp CCSCBHHHHHHHH
T ss_pred CCCCcHHHHHHHc
Confidence 9999999999754
No 256
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=99.08 E-value=2.6e-10 Score=108.26 Aligned_cols=87 Identities=25% Similarity=0.303 Sum_probs=74.5
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEec
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~ 442 (468)
+.||+|+||.||+|... +|+.||+|++..... .....+.+.+|++++.+++|+||+++++++.... ..++|+||+
T Consensus 12 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~~v~e~~ 87 (284)
T 3kk8_A 12 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL--SARDFQKLEREARICRKLQHPNIVRLHDSIQEES--FHYLVFDLV 87 (284)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEECCC
T ss_pred hhhcCcCCeEEEEEEEcCCCceEEEEEeecccC--CHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCC--EEEEEEecC
Confidence 67999999999999876 689999999854332 2234567899999999999999999999998876 789999999
Q ss_pred CCCChhhhhhcC
Q 012224 443 SNGTLYEHLHCK 454 (468)
Q Consensus 443 ~~GsL~~~L~~~ 454 (468)
++|+|.+++..+
T Consensus 88 ~~~~l~~~~~~~ 99 (284)
T 3kk8_A 88 TGGELFEDIVAR 99 (284)
T ss_dssp CSCBHHHHHHHH
T ss_pred CCCCHHHHHHhc
Confidence 999999988654
No 257
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=99.08 E-value=1.4e-10 Score=111.80 Aligned_cols=86 Identities=15% Similarity=0.271 Sum_probs=70.0
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEec
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~ 442 (468)
+.||+|+||.||+|... +|+.||||.+.... ..+++.+|++++.+++|+||+++++++.... ..++|+||+
T Consensus 35 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 106 (314)
T 3com_A 35 EKLGEGSYGSVYKAIHKETGQIVAIKQVPVES------DLQEIIKEISIMQQCDSPHVVKYYGSYFKNT--DLWIVMEYC 106 (314)
T ss_dssp EECC----CEEEEEEETTTCCEEEEEEEETTS------CCHHHHHHHHHHHTCCCTTBCCEEEEEEETT--EEEEEEECC
T ss_pred eeeccCCCeEEEEEEECCCCCEEEEEecCchH------HHHHHHHHHHHHHhCCCCCCccEEEEEEeCC--EEEEEeecC
Confidence 78999999999999886 68999999985432 1357899999999999999999999998876 789999999
Q ss_pred CCCChhhhhhcCCCC
Q 012224 443 SNGTLYEHLHCKSSS 457 (468)
Q Consensus 443 ~~GsL~~~L~~~~~~ 457 (468)
++|+|.+++......
T Consensus 107 ~~~~L~~~~~~~~~~ 121 (314)
T 3com_A 107 GAGSVSDIIRLRNKT 121 (314)
T ss_dssp TTEEHHHHHHHHTCC
T ss_pred CCCCHHHHHHhcCCC
Confidence 999999999744333
No 258
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=99.08 E-value=1.4e-10 Score=117.04 Aligned_cols=88 Identities=15% Similarity=0.206 Sum_probs=70.6
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeeccccc----chhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEE
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHW----TGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~----~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv 438 (468)
+.||+|+||.||+|... +++.||||++....... .......|.+|++++.+++|+|||++++++... ..++|
T Consensus 141 ~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~---~~~lv 217 (419)
T 3i6u_A 141 KTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE---DYYIV 217 (419)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEESS---EEEEE
T ss_pred eEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEecC---ceEEE
Confidence 78999999999999876 78999999986432110 111223588999999999999999999998654 58999
Q ss_pred EEecCCCChhhhhhcC
Q 012224 439 FDYASNGTLYEHLHCK 454 (468)
Q Consensus 439 ~ey~~~GsL~~~L~~~ 454 (468)
||||++|+|.+++...
T Consensus 218 ~e~~~~g~L~~~l~~~ 233 (419)
T 3i6u_A 218 LELMEGGELFDKVVGN 233 (419)
T ss_dssp EECCTTCBGGGGTSSS
T ss_pred EEcCCCCcHHHHHhcc
Confidence 9999999999998754
No 259
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=99.07 E-value=1e-10 Score=113.58 Aligned_cols=87 Identities=23% Similarity=0.290 Sum_probs=70.9
Q ss_pred hHhccCCceEEEEEEE------CCCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEE
Q 012224 364 NIIGSSPDSLVYKGTM------KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~------~~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~l 437 (468)
+.||+|+||.||+|.. .++..||||.+.... .....++|.+|+.++.+++|+||+++++++.... ..++
T Consensus 36 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~l 110 (327)
T 2yfx_A 36 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC---SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL--PRFI 110 (327)
T ss_dssp EECC--CSSCEEEEEC--------CCEEEEEECCSSC---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--SCEE
T ss_pred EEEcCCCCeeEEEEEEcCCCCCCccceEEEEEecccc---chhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCC--CcEE
Confidence 6799999999999984 257789999984321 2234568999999999999999999999998876 7899
Q ss_pred EEEecCCCChhhhhhcCC
Q 012224 438 VFDYASNGTLYEHLHCKS 455 (468)
Q Consensus 438 v~ey~~~GsL~~~L~~~~ 455 (468)
||||+++|+|.++++...
T Consensus 111 v~e~~~~~~L~~~l~~~~ 128 (327)
T 2yfx_A 111 LMELMAGGDLKSFLRETR 128 (327)
T ss_dssp EEECCTTEEHHHHHHHTS
T ss_pred EEecCCCCcHHHHHHhhc
Confidence 999999999999998654
No 260
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=99.07 E-value=1.1e-10 Score=110.89 Aligned_cols=90 Identities=19% Similarity=0.243 Sum_probs=72.2
Q ss_pred hHhccCCceEEEEEEECC----CCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEE
Q 012224 364 NIIGSSPDSLVYKGTMKG----GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~~----g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ 439 (468)
+.||+|+||.||+|.... +..||+|+..... .....+.|.+|+.++.+++|+||+++++++.+. ..++||
T Consensus 21 ~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~---~~~lv~ 94 (281)
T 1mp8_A 21 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT---SDSVREKFLQEALTMRQFDHPHIVKLIGVITEN---PVWIIM 94 (281)
T ss_dssp EEEEECSSSEEEEEEECCC--CCEEEEEEECTTTT---SHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS---SCEEEE
T ss_pred eEeeecCCeeEEEEEEecCCCCceEEEEEeccccC---CHHHHHHHHHHHHHHHhCCCCccceEEEEEccC---ccEEEE
Confidence 679999999999998752 4468998874321 223456899999999999999999999998543 589999
Q ss_pred EecCCCChhhhhhcCCCCcc
Q 012224 440 DYASNGTLYEHLHCKSSSLY 459 (468)
Q Consensus 440 ey~~~GsL~~~L~~~~~~~~ 459 (468)
||+++|+|.++++.+...+.
T Consensus 95 e~~~~~~L~~~l~~~~~~~~ 114 (281)
T 1mp8_A 95 ELCTLGELRSFLQVRKYSLD 114 (281)
T ss_dssp ECCTTEEHHHHHHHTTTTSC
T ss_pred ecCCCCCHHHHHHhcCCCCC
Confidence 99999999999986654433
No 261
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=99.07 E-value=1.8e-10 Score=111.24 Aligned_cols=86 Identities=22% Similarity=0.214 Sum_probs=70.1
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcC--CCCcEEEEEE
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRES--SPFTRMLVFD 440 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~--~~~~~~lv~e 440 (468)
+.||+|+||.||++... +|+.||||++.... ....+.+.+|++++.+++|+||+++++++... .....++|+|
T Consensus 35 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e 110 (317)
T 2buj_A 35 QKLGEGGFSYVDLVEGLHDGHFYALKRILCHE----QQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLP 110 (317)
T ss_dssp EEEEC--CEEEEEEEETTTCCEEEEEEEEESS----HHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEEE
T ss_pred EEecCCCCeEEEEEEecCCCcEEEEEEEecCC----HHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEEE
Confidence 68999999999999874 89999999985432 23456899999999999999999999998732 1125789999
Q ss_pred ecCCCChhhhhhc
Q 012224 441 YASNGTLYEHLHC 453 (468)
Q Consensus 441 y~~~GsL~~~L~~ 453 (468)
|+++|+|.+++..
T Consensus 111 ~~~~~~L~~~l~~ 123 (317)
T 2buj_A 111 FFKRGTLWNEIER 123 (317)
T ss_dssp CCTTCBHHHHHHH
T ss_pred eCCCCcHHHHHHH
Confidence 9999999999975
No 262
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=99.07 E-value=1.4e-10 Score=111.75 Aligned_cols=91 Identities=29% Similarity=0.419 Sum_probs=73.7
Q ss_pred hHhccCCceEEEEEEECCCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEecC
Q 012224 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~~ 443 (468)
+.||+|+||.||+|... ..+|||.++.... .....+.|.+|++++.+++|+||+++++++... ..++|+||++
T Consensus 42 ~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---~~~lv~e~~~ 114 (307)
T 3lb7_A 42 TRIGSGSFGTVYKGKWH--GDVAVKILKVVDP--TPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKD---NLAIVTQWCE 114 (307)
T ss_dssp EEEEECSSCEEEEEESS--SEEEEEECCCSSC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS---SCEEEEECCS
T ss_pred eEecCCCCeEEEEEEEC--CEEEEEEEecCCC--CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccC---cEEEEEecCC
Confidence 67999999999999874 3589998754332 223457899999999999999999999998654 5899999999
Q ss_pred CCChhhhhhcCCCCcccc
Q 012224 444 NGTLYEHLHCKSSSLYII 461 (468)
Q Consensus 444 ~GsL~~~L~~~~~~~~~~ 461 (468)
+|+|.++++.....+...
T Consensus 115 ~~~L~~~l~~~~~~~~~~ 132 (307)
T 3lb7_A 115 GSSLYKHLHVQETKFQMF 132 (307)
T ss_dssp SCBHHHHHHTSCCCCCHH
T ss_pred CCcHHHHHHhcccCCCHH
Confidence 999999998665555443
No 263
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=99.07 E-value=2.7e-10 Score=109.63 Aligned_cols=87 Identities=24% Similarity=0.319 Sum_probs=73.9
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEec
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~ 442 (468)
+.||+|+||.||+|... +|+.||||++..... .....+.+.+|++++.+++|+||+++++++...+ ..++||||+
T Consensus 9 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 84 (311)
T 4agu_A 9 GKIGEGSYGVVFKCRNRDTGQIVAIKKFLESED--DPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKR--RLHLVFEYC 84 (311)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECCCCC---HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEEECC
T ss_pred eEEeecCCeEEEEEEeCCCCcEEEEEEeecccc--chHHHHHHHHHHHHHHhCCCCCccchhheeecCC--eEEEEEEeC
Confidence 67999999999999986 699999999854322 2234567899999999999999999999998876 789999999
Q ss_pred CCCChhhhhhcC
Q 012224 443 SNGTLYEHLHCK 454 (468)
Q Consensus 443 ~~GsL~~~L~~~ 454 (468)
++|+|.++++..
T Consensus 85 ~~~~l~~~~~~~ 96 (311)
T 4agu_A 85 DHTVLHELDRYQ 96 (311)
T ss_dssp SEEHHHHHHHTS
T ss_pred CCchHHHHHhhh
Confidence 999999988654
No 264
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=99.07 E-value=1.4e-10 Score=109.81 Aligned_cols=88 Identities=25% Similarity=0.333 Sum_probs=73.7
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEec
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~ 442 (468)
+.||+|+||.||+|... ++..||||++...... .....+.+.+|++++.+++|+||+++++++.+.. ..++||||+
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 91 (279)
T 3fdn_A 15 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDAT--RVYLILEYA 91 (279)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHH-HHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEEECCC
T ss_pred eEEecCCCeEEEEEEEccCCcEEEEEEEeccccc-hhhHHHHHHHHHHHHHcCCCCCCcchhheEecCC--EEEEEEecC
Confidence 67999999999999876 6789999998533211 1123567899999999999999999999999876 799999999
Q ss_pred CCCChhhhhhcC
Q 012224 443 SNGTLYEHLHCK 454 (468)
Q Consensus 443 ~~GsL~~~L~~~ 454 (468)
++|+|.+++...
T Consensus 92 ~~~~l~~~l~~~ 103 (279)
T 3fdn_A 92 PLGTVYRELQKL 103 (279)
T ss_dssp TTEEHHHHHHHH
T ss_pred CCCcHHHHHHhc
Confidence 999999998753
No 265
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=99.07 E-value=2.4e-10 Score=109.76 Aligned_cols=85 Identities=22% Similarity=0.334 Sum_probs=71.7
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEec
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~ 442 (468)
+.||+|+||.||++... +|+.||+|.+..... ...+.+.+|++++.+++|+||+++++++.+.. ..++|+||+
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 88 (304)
T 2jam_A 15 EVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPA----FRDSSLENEIAVLKKIKHENIVTLEDIYESTT--HYYLVMQLV 88 (304)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEECC----------HHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEECCC
T ss_pred eeccCCCCceEEEEEECCCCCEEEEEEEecccc----cchHHHHHHHHHHHhCCCCCeeehhhhcccCC--EEEEEEEcC
Confidence 78999999999999886 799999999854321 12457899999999999999999999998876 899999999
Q ss_pred CCCChhhhhhcC
Q 012224 443 SNGTLYEHLHCK 454 (468)
Q Consensus 443 ~~GsL~~~L~~~ 454 (468)
++|+|.+++...
T Consensus 89 ~~~~L~~~l~~~ 100 (304)
T 2jam_A 89 SGGELFDRILER 100 (304)
T ss_dssp CSCBHHHHHHHH
T ss_pred CCccHHHHHHHc
Confidence 999999998653
No 266
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=99.07 E-value=2.4e-10 Score=107.92 Aligned_cols=88 Identities=20% Similarity=0.265 Sum_probs=74.4
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEec
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~ 442 (468)
+.||+|+||.||+|+.. +|+.||||.+...... .....+.+.+|++++.+++|+||+++++++...+ ..++|+||+
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 93 (276)
T 2h6d_A 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIR-SLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPT--DFFMVMEYV 93 (276)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHH-HTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEEEEECC
T ss_pred eeecCCCCeEEEEEEECCCCceEEEEEecccccc-chhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCC--eEEEEEecc
Confidence 67999999999999986 7999999998543211 1123567899999999999999999999998876 899999999
Q ss_pred CCCChhhhhhcC
Q 012224 443 SNGTLYEHLHCK 454 (468)
Q Consensus 443 ~~GsL~~~L~~~ 454 (468)
++|+|.+++...
T Consensus 94 ~~~~L~~~l~~~ 105 (276)
T 2h6d_A 94 SGGELFDYICKH 105 (276)
T ss_dssp CSCBHHHHHHHH
T ss_pred CCCcHHHHHhcc
Confidence 999999999753
No 267
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=99.07 E-value=1.7e-10 Score=110.40 Aligned_cols=90 Identities=19% Similarity=0.144 Sum_probs=68.2
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeeccccc----------------------chhhHHHHHHHHHHHhcCCCCCc
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHW----------------------TGYLELYFQREVADLARINHENT 420 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~----------------------~~~~~~~f~~e~~~l~~l~H~nl 420 (468)
+.||+|+||.||+|... +|+.||||++....... .....+.|.+|++++.+++|+||
T Consensus 19 ~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 98 (298)
T 2zv2_A 19 DEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDHPNV 98 (298)
T ss_dssp EEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTCCCTTB
T ss_pred eEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhCCCCCC
Confidence 67999999999999875 78899999985432110 00123568999999999999999
Q ss_pred cceeeEEEcCCCCcEEEEEEecCCCChhhhhhc
Q 012224 421 GKLLGYCRESSPFTRMLVFDYASNGTLYEHLHC 453 (468)
Q Consensus 421 v~l~g~~~~~~~~~~~lv~ey~~~GsL~~~L~~ 453 (468)
+++++++.+......++||||+++|+|.+++..
T Consensus 99 v~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~ 131 (298)
T 2zv2_A 99 VKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL 131 (298)
T ss_dssp CCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS
T ss_pred CeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc
Confidence 999999987433378999999999999887643
No 268
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=99.07 E-value=1.2e-10 Score=111.40 Aligned_cols=93 Identities=20% Similarity=0.247 Sum_probs=73.4
Q ss_pred hHhccCCceEEEEEEEC-CCC---eEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEE
Q 012224 364 NIIGSSPDSLVYKGTMK-GGP---EIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~---~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ 439 (468)
+.||+|+||.||+|... ++. .+|+|.+.... .....+.|.+|++++.+++|+||+++++++.+.+. ..++|+
T Consensus 27 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-~~~~v~ 102 (298)
T 3pls_A 27 RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRIT---EMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEG-LPHVLL 102 (298)
T ss_dssp EEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCC---SHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSS-CCEEEE
T ss_pred ceeccCCCceEEEEEEecCCCceeeeeeeeccccc---cHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCC-CcEEEE
Confidence 67999999999999864 333 68999874221 22345789999999999999999999999976551 348999
Q ss_pred EecCCCChhhhhhcCCCCccc
Q 012224 440 DYASNGTLYEHLHCKSSSLYI 460 (468)
Q Consensus 440 ey~~~GsL~~~L~~~~~~~~~ 460 (468)
||+++|+|.++++.....+..
T Consensus 103 e~~~~~~L~~~~~~~~~~~~~ 123 (298)
T 3pls_A 103 PYMCHGDLLQFIRSPQRNPTV 123 (298)
T ss_dssp CCCTTCBHHHHHHCTTCCCBH
T ss_pred ecccCCCHHHHHhccccCCCH
Confidence 999999999999875554443
No 269
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=99.07 E-value=2.7e-10 Score=117.71 Aligned_cols=89 Identities=20% Similarity=0.212 Sum_probs=71.2
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeeccccc---------chhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCC
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHW---------TGYLELYFQREVADLARINHENTGKLLGYCRESSPF 433 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~---------~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~ 433 (468)
+.||+|+||.||+|... ++..||||++....... .....+++.+|++++.+++|||||+++++|.+..
T Consensus 42 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~-- 119 (504)
T 3q5i_A 42 RKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKK-- 119 (504)
T ss_dssp EEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--
T ss_pred eEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCC--
Confidence 68999999999999986 68899999985432110 0123567999999999999999999999999876
Q ss_pred cEEEEEEecCCCChhhhhhcC
Q 012224 434 TRMLVFDYASNGTLYEHLHCK 454 (468)
Q Consensus 434 ~~~lv~ey~~~GsL~~~L~~~ 454 (468)
..++||||+++|+|.+++...
T Consensus 120 ~~~lv~e~~~gg~L~~~l~~~ 140 (504)
T 3q5i_A 120 YFYLVTEFYEGGELFEQIINR 140 (504)
T ss_dssp EEEEEEECCTTCBHHHHHHHH
T ss_pred EEEEEEecCCCCcHHHHHHHc
Confidence 899999999999999998653
No 270
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=99.07 E-value=1.5e-10 Score=113.15 Aligned_cols=88 Identities=27% Similarity=0.355 Sum_probs=72.2
Q ss_pred hHhccCCceEEEEEEE------CCCCeEEEEEEeecccccchhhHHHHHHHHHHHhcC-CCCCccceeeEEEcCCCCcEE
Q 012224 364 NIIGSSPDSLVYKGTM------KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRM 436 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~------~~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l-~H~nlv~l~g~~~~~~~~~~~ 436 (468)
+.||+|+||.||+|.. .++..||||.+.... .....+.|.+|++++.++ +|+||+++++++...+ ..+
T Consensus 51 ~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~--~~~ 125 (344)
T 1rjb_A 51 KVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA---DSSEREALMSELKMMTQLGSHENIVNLLGACTLSG--PIY 125 (344)
T ss_dssp EEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC---------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--SCE
T ss_pred eeecCCCCceeEEeeeeccccCCcceEEEEEeccccc---CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC--ccE
Confidence 7899999999999986 245679999985332 112346799999999999 9999999999998876 789
Q ss_pred EEEEecCCCChhhhhhcCCC
Q 012224 437 LVFDYASNGTLYEHLHCKSS 456 (468)
Q Consensus 437 lv~ey~~~GsL~~~L~~~~~ 456 (468)
+||||+++|+|.+++.....
T Consensus 126 lv~e~~~~g~L~~~l~~~~~ 145 (344)
T 1rjb_A 126 LIFEYCCYGDLLNYLRSKRE 145 (344)
T ss_dssp EEEECCTTCBHHHHHHTTTT
T ss_pred EEEecCCCCcHHHHHhhccc
Confidence 99999999999999986543
No 271
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=99.07 E-value=3.2e-10 Score=110.68 Aligned_cols=88 Identities=9% Similarity=0.057 Sum_probs=74.4
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEec
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~ 442 (468)
+.||+|+||.||++... +++.+|+|.+.... .......+.|.+|++++.+++|+||+++++++.+.+ ..++||||+
T Consensus 47 ~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~ 123 (335)
T 2owb_A 47 RFLGKGGFAKCFEISDADTKEVFAGKIVPKSL-LLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDND--FVFVVLELC 123 (335)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEGGG-CCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEEEECCC
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEechhh-hcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCC--eEEEEEecC
Confidence 67999999999999986 68889999985332 112234678999999999999999999999999876 899999999
Q ss_pred CCCChhhhhhcC
Q 012224 443 SNGTLYEHLHCK 454 (468)
Q Consensus 443 ~~GsL~~~L~~~ 454 (468)
++|+|.+++...
T Consensus 124 ~~~~L~~~~~~~ 135 (335)
T 2owb_A 124 RRRSLLELHKRR 135 (335)
T ss_dssp TTCBHHHHHHHH
T ss_pred CCCCHHHHHhcc
Confidence 999999998653
No 272
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=99.06 E-value=1.6e-10 Score=113.37 Aligned_cols=87 Identities=15% Similarity=0.141 Sum_probs=72.8
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcC-CCCCccceeeEEEcCCCCcEEEEEEe
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDY 441 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l-~H~nlv~l~g~~~~~~~~~~~lv~ey 441 (468)
++||+|+||.||+|+.. +|+.||||++..... ......+.+..|.+++.++ +|+||+++++++.+.+ ..++||||
T Consensus 23 ~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~--~~~lv~E~ 99 (345)
T 1xjd_A 23 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVV-LMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKE--NLFFVMEY 99 (345)
T ss_dssp EEEEECSSSEEEEEEETTTTEEEEEEEEEHHHH-HHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS--EEEEEEEC
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHh-hhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCC--EEEEEEeC
Confidence 78999999999999986 789999999854321 1112345688899999887 9999999999999877 89999999
Q ss_pred cCCCChhhhhhc
Q 012224 442 ASNGTLYEHLHC 453 (468)
Q Consensus 442 ~~~GsL~~~L~~ 453 (468)
+++|+|.+++..
T Consensus 100 ~~gg~L~~~l~~ 111 (345)
T 1xjd_A 100 LNGGDLMYHIQS 111 (345)
T ss_dssp CTTCBHHHHHHH
T ss_pred CCCCcHHHHHHH
Confidence 999999999975
No 273
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=99.06 E-value=2.4e-10 Score=117.80 Aligned_cols=87 Identities=21% Similarity=0.209 Sum_probs=70.0
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEec
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~ 442 (468)
+.||+|+||.||+|... ++..+|||++...... ....+.+.+|++++.+++|||||+++++|.+.. ..++||||+
T Consensus 43 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~lv~e~~ 118 (494)
T 3lij_A 43 KKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVS--TSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKR--NYYLVMECY 118 (494)
T ss_dssp EEEECC---EEEEEEETTTCCEEEEEEEEC-------CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEEEECC
T ss_pred eEEecCCCEEEEEEEECCCCcEEEEEEEeccccC--chHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC--EEEEEEecC
Confidence 78999999999999986 7899999998543211 122467899999999999999999999999876 899999999
Q ss_pred CCCChhhhhhcC
Q 012224 443 SNGTLYEHLHCK 454 (468)
Q Consensus 443 ~~GsL~~~L~~~ 454 (468)
++|+|.+++...
T Consensus 119 ~~g~L~~~~~~~ 130 (494)
T 3lij_A 119 KGGELFDEIIHR 130 (494)
T ss_dssp CSCBHHHHHHHH
T ss_pred CCCcHHHHHHHc
Confidence 999999988653
No 274
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=99.06 E-value=3.2e-10 Score=116.42 Aligned_cols=88 Identities=22% Similarity=0.257 Sum_probs=75.3
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEec
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~ 442 (468)
+.||+|+||.||+|... +|+.||||++...... .....+.+.+|++++.+++|||||++++++.+.. ..++|+||+
T Consensus 32 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~lv~e~~ 108 (484)
T 3nyv_A 32 RVLGKGSFGEVILCKDKITGQECAVKVISKRQVK-QKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKG--YFYLVGEVY 108 (484)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC-BSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEEECCC
T ss_pred eEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcc-cchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC--EEEEEEecC
Confidence 78999999999999886 7999999998543211 1234568999999999999999999999999876 899999999
Q ss_pred CCCChhhhhhcC
Q 012224 443 SNGTLYEHLHCK 454 (468)
Q Consensus 443 ~~GsL~~~L~~~ 454 (468)
++|+|.+++..+
T Consensus 109 ~~~~L~~~~~~~ 120 (484)
T 3nyv_A 109 TGGELFDEIISR 120 (484)
T ss_dssp CSCBHHHHHHTC
T ss_pred CCCCHHHHHHhc
Confidence 999999999754
No 275
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=99.06 E-value=2.1e-10 Score=119.06 Aligned_cols=88 Identities=18% Similarity=0.064 Sum_probs=74.4
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEec
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~ 442 (468)
++||+|+||.||+|... +|+.||||++...... .....+.+.+|++++.+++|+|||++++++.+.. ..++||||+
T Consensus 191 ~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~-~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~--~l~lVmE~~ 267 (543)
T 3c4z_A 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLK-KRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKT--DLCLVMTIM 267 (543)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHH-HTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEECCC
T ss_pred EEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhh-hhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCC--EEEEEEEec
Confidence 56999999999999986 7999999998543211 1123467899999999999999999999998876 899999999
Q ss_pred CCCChhhhhhcC
Q 012224 443 SNGTLYEHLHCK 454 (468)
Q Consensus 443 ~~GsL~~~L~~~ 454 (468)
++|+|.++|...
T Consensus 268 ~gg~L~~~l~~~ 279 (543)
T 3c4z_A 268 NGGDIRYHIYNV 279 (543)
T ss_dssp TTCBHHHHHHTS
T ss_pred cCCCHHHHHHHh
Confidence 999999999754
No 276
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=99.05 E-value=5.1e-10 Score=110.64 Aligned_cols=89 Identities=27% Similarity=0.355 Sum_probs=74.6
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccc----hhhHHHHHHHHHHHhcC-CCCCccceeeEEEcCCCCcEEE
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWT----GYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRML 437 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~----~~~~~~f~~e~~~l~~l-~H~nlv~l~g~~~~~~~~~~~l 437 (468)
+.||+|+||.||+|... +|+.||||++........ ....+.+.+|++++.++ +|+||+++++++.... ..++
T Consensus 100 ~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~--~~~l 177 (365)
T 2y7j_A 100 DVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSS--FMFL 177 (365)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSS--EEEE
T ss_pred eEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCC--EEEE
Confidence 78999999999999986 799999999865432111 12245788999999999 7999999999998876 8999
Q ss_pred EEEecCCCChhhhhhcC
Q 012224 438 VFDYASNGTLYEHLHCK 454 (468)
Q Consensus 438 v~ey~~~GsL~~~L~~~ 454 (468)
||||+++|+|.+++...
T Consensus 178 v~e~~~g~~L~~~l~~~ 194 (365)
T 2y7j_A 178 VFDLMRKGELFDYLTEK 194 (365)
T ss_dssp EECCCTTCBHHHHHHHH
T ss_pred EEEeCCCCcHHHHHHhc
Confidence 99999999999999753
No 277
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=99.05 E-value=1.7e-10 Score=111.18 Aligned_cols=81 Identities=30% Similarity=0.491 Sum_probs=69.7
Q ss_pred hHhccCCceEEEEEEECCCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEecC
Q 012224 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~~ 443 (468)
+.||+|+||.||+|+.. ++.||||++... ...+.|.+|++++.+++|+||+++++++.+ ..++||||++
T Consensus 14 ~~lg~G~~g~V~~~~~~-~~~vavK~~~~~------~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~----~~~lv~e~~~ 82 (307)
T 2eva_A 14 EVVGRGAFGVVCKAKWR-AKDVAIKQIESE------SERKAFIVELRQLSRVNHPNIVKLYGACLN----PVCLVMEYAE 82 (307)
T ss_dssp EEEECCSSSEEEEEEET-TEEEEEEECSST------THHHHHHHHHHHHHHCCCTTBCCEEEBCTT----TTEEEEECCT
T ss_pred eEeecCCCceEEEEEEC-CeeEEEEEecCh------hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC----CcEEEEEcCC
Confidence 67999999999999985 778999998421 235689999999999999999999998863 4789999999
Q ss_pred CCChhhhhhcCC
Q 012224 444 NGTLYEHLHCKS 455 (468)
Q Consensus 444 ~GsL~~~L~~~~ 455 (468)
+|+|.++++...
T Consensus 83 ~~~L~~~l~~~~ 94 (307)
T 2eva_A 83 GGSLYNVLHGAE 94 (307)
T ss_dssp TCBHHHHHHCSS
T ss_pred CCCHHHHHhccC
Confidence 999999998654
No 278
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=99.05 E-value=3.6e-10 Score=108.40 Aligned_cols=85 Identities=18% Similarity=0.227 Sum_probs=73.7
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEec
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~ 442 (468)
+.||+|+||.||+|... +++.||||.+..... ....+.|.+|++++.+++|+||+++++++.... ..++|+||+
T Consensus 28 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 102 (303)
T 3a7i_A 28 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA---EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDT--KLWIIMEYL 102 (303)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEETTTC---STTHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEEECC
T ss_pred hhhcccCCeEEEEEEECCCCcEEEEEEeccccc---HHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC--eEEEEEEeC
Confidence 67999999999999875 789999999854332 123568999999999999999999999998876 789999999
Q ss_pred CCCChhhhhhc
Q 012224 443 SNGTLYEHLHC 453 (468)
Q Consensus 443 ~~GsL~~~L~~ 453 (468)
++|+|.+++..
T Consensus 103 ~~~~L~~~~~~ 113 (303)
T 3a7i_A 103 GGGSALDLLEP 113 (303)
T ss_dssp TTEEHHHHHTT
T ss_pred CCCcHHHHHhc
Confidence 99999999865
No 279
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=99.05 E-value=2.1e-10 Score=110.71 Aligned_cols=91 Identities=19% Similarity=0.081 Sum_probs=71.9
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcC-CCCCccceeeEEEcCCCCcEEEEEEe
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDY 441 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l-~H~nlv~l~g~~~~~~~~~~~lv~ey 441 (468)
+.||+|+||+||+|... +|+.||||++..... .......+..|+..+.++ +|+|||+++++|.+.+ ..++||||
T Consensus 63 ~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~--~~~lv~e~ 138 (311)
T 3p1a_A 63 SRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFR--GPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGG--ILYLQTEL 138 (311)
T ss_dssp EEEEEETTEEEEEEEETTTSCEEEEEEESSSCC--SHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEEEC
T ss_pred heeccCCCeEEEEEEECCCCeEEEEEEeccccc--ChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCC--EEEEEEec
Confidence 78999999999999987 799999998743322 123345566777666666 9999999999999877 89999999
Q ss_pred cCCCChhhhhhcCCCCcc
Q 012224 442 ASNGTLYEHLHCKSSSLY 459 (468)
Q Consensus 442 ~~~GsL~~~L~~~~~~~~ 459 (468)
+ +|+|.+++...+..++
T Consensus 139 ~-~~~L~~~~~~~~~~l~ 155 (311)
T 3p1a_A 139 C-GPSLQQHCEAWGASLP 155 (311)
T ss_dssp C-CCBHHHHHHHHCSCCC
T ss_pred c-CCCHHHHHHhcCCCCC
Confidence 9 7799999876554443
No 280
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=99.05 E-value=1.5e-10 Score=110.38 Aligned_cols=90 Identities=29% Similarity=0.441 Sum_probs=71.5
Q ss_pred hHhccCCceEEEEEEECCCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEecC
Q 012224 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~~ 443 (468)
+.||+|+||.||+|+... .+|||++..... .....+.|.+|++++.+++|+||+++++++... ..++|+||++
T Consensus 30 ~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---~~~lv~e~~~ 102 (289)
T 3og7_A 30 QRIGSGSFGTVYKGKWHG--DVAVKMLNVTAP--TPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAP---QLAIVTQWCE 102 (289)
T ss_dssp EEEEECSSEEEEEEESSS--EEEEEEESCSSC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS---SCEEEEECCC
T ss_pred eEecCCCCeEEEEEEEcC--ceEEEEEeccCC--CHHHHHHHHHHHHHHHhCCCCcEEEEEeeccCC---ccEEEEEecC
Confidence 679999999999998743 599999854432 233457899999999999999999999987543 5899999999
Q ss_pred CCChhhhhhcCCCCccc
Q 012224 444 NGTLYEHLHCKSSSLYI 460 (468)
Q Consensus 444 ~GsL~~~L~~~~~~~~~ 460 (468)
+|+|.++++.....+..
T Consensus 103 ~~~L~~~l~~~~~~~~~ 119 (289)
T 3og7_A 103 GSSLYHHLHASETKFEM 119 (289)
T ss_dssp EEEHHHHHTTC---CCH
T ss_pred CCcHHHHHhhccCCCCH
Confidence 99999999766554443
No 281
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=99.04 E-value=1e-10 Score=112.89 Aligned_cols=90 Identities=22% Similarity=0.240 Sum_probs=72.7
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCC--cEEEEEE
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPF--TRMLVFD 440 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~--~~~lv~e 440 (468)
+.||+|+||.||++... +|+.||||++...... .....+.|.+|++++.+++|+||+++++++...... ..++|||
T Consensus 18 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~lv~e 96 (311)
T 3ork_A 18 EILGFGGMSEVHLARDLRDHRDVAVKVLRADLAR-DPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVME 96 (311)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECTTTTT-SHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEEEEEE
T ss_pred EEEccCCCEEEEEEEECCCCceEEEEEeCccccC-CHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccEEEEe
Confidence 67999999999999874 7899999998543211 223456799999999999999999999998764411 2389999
Q ss_pred ecCCCChhhhhhcC
Q 012224 441 YASNGTLYEHLHCK 454 (468)
Q Consensus 441 y~~~GsL~~~L~~~ 454 (468)
|+++|+|.++++..
T Consensus 97 ~~~g~~L~~~l~~~ 110 (311)
T 3ork_A 97 YVDGVTLRDIVHTE 110 (311)
T ss_dssp CCCEEEHHHHHHHH
T ss_pred cCCCCCHHHHHHhc
Confidence 99999999999754
No 282
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=99.04 E-value=2.3e-10 Score=112.14 Aligned_cols=81 Identities=20% Similarity=0.160 Sum_probs=69.3
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcC-CCCCccceeeEEEcCCCCcEEEEEEe
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDY 441 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l-~H~nlv~l~g~~~~~~~~~~~lv~ey 441 (468)
+.||+|+||.||+|... +|+.||||.+..... .+.+|++++.++ +|+|||++++++.+.. ..++||||
T Consensus 28 ~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~--------~~~~E~~~l~~~~~hp~iv~~~~~~~~~~--~~~lv~E~ 97 (342)
T 2qr7_A 28 EDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR--------DPTEEIEILLRYGQHPNIITLKDVYDDGK--YVYVVTEL 97 (342)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEETTTC--------CCHHHHHHHHHHTTSTTBCCEEEEEECSS--EEEEEECC
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC--------ChHHHHHHHHHhcCCCCcCeEEEEEEcCC--EEEEEEeC
Confidence 78999999999999886 788999999853221 245688888887 7999999999998876 89999999
Q ss_pred cCCCChhhhhhcC
Q 012224 442 ASNGTLYEHLHCK 454 (468)
Q Consensus 442 ~~~GsL~~~L~~~ 454 (468)
+++|+|.+++..+
T Consensus 98 ~~gg~L~~~i~~~ 110 (342)
T 2qr7_A 98 MKGGELLDKILRQ 110 (342)
T ss_dssp CCSCBHHHHHHTC
T ss_pred CCCCcHHHHHHHc
Confidence 9999999999754
No 283
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=99.04 E-value=6.8e-10 Score=105.76 Aligned_cols=88 Identities=24% Similarity=0.194 Sum_probs=72.4
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCC--CCcEEEEEE
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS--PFTRMLVFD 440 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~--~~~~~lv~e 440 (468)
+.||+|+||.||+|... ++..||+|.+..... .....+.|.+|++++.+++|+||+++++++.... ....++|||
T Consensus 32 ~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e 109 (290)
T 1t4h_A 32 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL--TKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTE 109 (290)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEE
T ss_pred eeccCCCCeEEEEeEecCCceEEEEEEecchhh--CHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEEEE
Confidence 57999999999999876 788899999854321 2334678999999999999999999999986521 125789999
Q ss_pred ecCCCChhhhhhc
Q 012224 441 YASNGTLYEHLHC 453 (468)
Q Consensus 441 y~~~GsL~~~L~~ 453 (468)
|+++|+|.+++..
T Consensus 110 ~~~~~~L~~~l~~ 122 (290)
T 1t4h_A 110 LMTSGTLKTYLKR 122 (290)
T ss_dssp CCCSCBHHHHHHH
T ss_pred ecCCCCHHHHHHH
Confidence 9999999999975
No 284
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=99.04 E-value=2.7e-10 Score=117.16 Aligned_cols=87 Identities=22% Similarity=0.227 Sum_probs=74.6
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEec
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~ 442 (468)
+.||+|+||.||+|... +|+.||||++..... .....+.+.+|++++.+++|||||++++++.+.. ..++|+||+
T Consensus 28 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~lv~e~~ 103 (486)
T 3mwu_A 28 CMLGKGSFGEVLKCKDRITQQEYAVKVINKASA--KNKDTSTILREVELLKKLDHPNIMKLFEILEDSS--SFYIVGELY 103 (486)
T ss_dssp EEEECCSSSEEEEEEETTTCCEEEEEEEEHHHH--BCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEECCC
T ss_pred EEEeecCCEEEEEEEECCCCCEEEEEEEecccc--cchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCC--EEEEEEEcC
Confidence 78999999999999886 799999999854321 1123568999999999999999999999999876 899999999
Q ss_pred CCCChhhhhhcC
Q 012224 443 SNGTLYEHLHCK 454 (468)
Q Consensus 443 ~~GsL~~~L~~~ 454 (468)
++|+|.+++...
T Consensus 104 ~~~~L~~~~~~~ 115 (486)
T 3mwu_A 104 TGGELFDEIIKR 115 (486)
T ss_dssp CSCBHHHHHHHH
T ss_pred CCCcHHHHHHhc
Confidence 999999988653
No 285
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=99.03 E-value=2e-10 Score=111.17 Aligned_cols=85 Identities=18% Similarity=0.314 Sum_probs=72.1
Q ss_pred hHhccCCceEEEEEEEC------CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEE
Q 012224 364 NIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~------~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~l 437 (468)
+.||+|+||.||+|+.. +++.||||.+.... .......|.+|++++.+++|+||+++++++.+.+ ..++
T Consensus 31 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~l 105 (322)
T 1p4o_A 31 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA---SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ--PTLV 105 (322)
T ss_dssp EEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS---CHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSS--SCEE
T ss_pred eEeccCCceEEEeeeecCccCCCCceEEEEEeccccc---CHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCC--ccEE
Confidence 78999999999999764 36789999984321 2234567999999999999999999999998876 7899
Q ss_pred EEEecCCCChhhhhhc
Q 012224 438 VFDYASNGTLYEHLHC 453 (468)
Q Consensus 438 v~ey~~~GsL~~~L~~ 453 (468)
||||+++|+|.++++.
T Consensus 106 v~e~~~~~~L~~~l~~ 121 (322)
T 1p4o_A 106 IMELMTRGDLKSYLRS 121 (322)
T ss_dssp EEECCTTCBHHHHHHH
T ss_pred EEEeCCCCcHHHHHHH
Confidence 9999999999999975
No 286
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=99.03 E-value=1.9e-10 Score=114.09 Aligned_cols=88 Identities=23% Similarity=0.153 Sum_probs=64.8
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHH-HhcCCCCCccceeeEEEcCCCCcEEEEEEe
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVAD-LARINHENTGKLLGYCRESSPFTRMLVFDY 441 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~-l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey 441 (468)
++||+|+||.||+++.. +++.||||++...... .....+.+.+|..+ +..++|+|||++++++.+.+ ..++||||
T Consensus 44 ~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~-~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~--~~~lv~E~ 120 (373)
T 2r5t_A 44 KVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAIL-KKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTAD--KLYFVLDY 120 (373)
T ss_dssp EEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC--------------CCBCCCCCTTBCCEEEEEECSS--EEEEEEEC
T ss_pred EEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhh-hhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCC--EEEEEEeC
Confidence 78999999999999986 6889999998543211 12234567777776 56789999999999999877 89999999
Q ss_pred cCCCChhhhhhcC
Q 012224 442 ASNGTLYEHLHCK 454 (468)
Q Consensus 442 ~~~GsL~~~L~~~ 454 (468)
+++|+|.++++..
T Consensus 121 ~~gg~L~~~l~~~ 133 (373)
T 2r5t_A 121 INGGELFYHLQRE 133 (373)
T ss_dssp CCSCBHHHHHHHH
T ss_pred CCCCcHHHHHHhc
Confidence 9999999999753
No 287
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=99.03 E-value=2e-10 Score=113.25 Aligned_cols=107 Identities=18% Similarity=0.137 Sum_probs=81.7
Q ss_pred HHHHHHHHHhhH--hHhccCCceEEEEEEECCCCeEEEEEEeeccccc-------chhhHHHHHHHHHHHhcCCCCCccc
Q 012224 352 RQELEVACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHW-------TGYLELYFQREVADLARINHENTGK 422 (468)
Q Consensus 352 ~~el~~at~~~~--~~lg~G~~g~vy~~~~~~g~~vavK~l~~~~~~~-------~~~~~~~f~~e~~~l~~l~H~nlv~ 422 (468)
.+++....++|. +.||+|+||.||+|...+|..||||++....... .....+.|.+|++++.+++|+||++
T Consensus 14 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~ 93 (362)
T 3pg1_A 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILG 93 (362)
T ss_dssp HHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred HHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccc
Confidence 455566666665 8899999999999998889999999985432110 1122468999999999999999999
Q ss_pred eeeEEEcCC---CCcEEEEEEecCCCChhhhhhcCCCCcc
Q 012224 423 LLGYCRESS---PFTRMLVFDYASNGTLYEHLHCKSSSLY 459 (468)
Q Consensus 423 l~g~~~~~~---~~~~~lv~ey~~~GsL~~~L~~~~~~~~ 459 (468)
+++++...+ ....++||||++ |+|.+++......+.
T Consensus 94 ~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~ 132 (362)
T 3pg1_A 94 LRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVIS 132 (362)
T ss_dssp CSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCC
T ss_pred eeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCC
Confidence 999985432 124799999998 799999986654443
No 288
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=99.03 E-value=9.1e-11 Score=119.29 Aligned_cols=88 Identities=19% Similarity=0.082 Sum_probs=65.8
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEec
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~ 442 (468)
+.||+|+||.||+|... +|+.||||++...... .....+.+.+|++++.+++|+||++++++|...+ ..++|||||
T Consensus 154 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~--~~~lv~e~~ 230 (446)
T 4ejn_A 154 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIV-AKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHD--RLCFVMEYA 230 (446)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC--------------CCCCCSCTTSCCEEEEEEETT--EEEEEECCC
T ss_pred EEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhh-hhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCC--EEEEEEeeC
Confidence 78999999999999876 7999999998533211 1223457889999999999999999999999877 899999999
Q ss_pred CCCChhhhhhcC
Q 012224 443 SNGTLYEHLHCK 454 (468)
Q Consensus 443 ~~GsL~~~L~~~ 454 (468)
++|+|.+++...
T Consensus 231 ~~~~L~~~l~~~ 242 (446)
T 4ejn_A 231 NGGELFFHLSRE 242 (446)
T ss_dssp SSCBHHHHHHHH
T ss_pred CCCcHHHHHHhc
Confidence 999999999753
No 289
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.03 E-value=2.5e-12 Score=127.56 Aligned_cols=111 Identities=20% Similarity=0.186 Sum_probs=78.1
Q ss_pred CCEEEEEecCCCCcccCCcccc-----CCCCCCEEEccCccccccCChhh-cCCCCCCEEEccCCCCCCCCCcCC-----
Q 012224 70 DRVLKINISGSSLKGFLAPELG-----LLTYLQELILHGNNLIGIIPKEL-GLLKRLKILDLGTNQLTGPIPPEI----- 138 (468)
Q Consensus 70 ~~v~~L~L~~n~l~g~~p~~l~-----~l~~L~~L~Ls~N~l~g~ip~~~-~~l~~L~~L~Ls~N~l~g~iP~~~----- 138 (468)
..++.|+|++|.++..-...+. ..++|++|+|++|.++..-...+ ..+++|+.|||++|+++..-...+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 4688899999988764333332 23688999999998875433333 346688899999998874333333
Q ss_pred CCCcccceeecccccCcc----cCChhccCCCCCcEEeccCCCCCc
Q 012224 139 GNLTGLVKINLQSNGLTG----RLPAELGNLISLEELHLDRNRLQG 180 (468)
Q Consensus 139 ~~l~~L~~L~Ls~N~l~g----~~p~~l~~l~~L~~L~ls~N~l~g 180 (468)
...++|+.|+|++|.++. .++..+..+++|++|+|++|.+++
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~ 197 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGD 197 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCc
Confidence 245778999999998874 355566778889999999998863
No 290
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=99.03 E-value=2.4e-10 Score=108.64 Aligned_cols=88 Identities=20% Similarity=0.296 Sum_probs=73.8
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEec
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~ 442 (468)
+.||+|+||.||+|... ++..||||.+...... .....+.+.+|++++.+++|+||+++++++.+.+ ..++|+||+
T Consensus 20 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 96 (284)
T 2vgo_A 20 RPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLE-KEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRK--RIYLMLEFA 96 (284)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHH-HTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEEEECCC
T ss_pred heecCCCCeEEEEEEEcCCCcEEEEEEEcccccc-hHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCC--EEEEEEEeC
Confidence 67999999999999886 6788999998533211 1123467999999999999999999999999876 899999999
Q ss_pred CCCChhhhhhcC
Q 012224 443 SNGTLYEHLHCK 454 (468)
Q Consensus 443 ~~GsL~~~L~~~ 454 (468)
++|+|.+++...
T Consensus 97 ~~~~L~~~l~~~ 108 (284)
T 2vgo_A 97 PRGELYKELQKH 108 (284)
T ss_dssp TTEEHHHHHHHH
T ss_pred CCCcHHHHHHhc
Confidence 999999999754
No 291
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=99.03 E-value=1.9e-10 Score=113.62 Aligned_cols=81 Identities=17% Similarity=0.135 Sum_probs=68.7
Q ss_pred hHhccCCceEEEEEE------ECCCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCC---CCCccceeeEEEcCCCCc
Q 012224 364 NIIGSSPDSLVYKGT------MKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN---HENTGKLLGYCRESSPFT 434 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~------~~~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~---H~nlv~l~g~~~~~~~~~ 434 (468)
+.||+|+||.||+|. ..+++.||||++... ...+|..|++++.+++ |+|++++++++...+ .
T Consensus 71 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-------~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~--~ 141 (365)
T 3e7e_A 71 HLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA-------NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQN--G 141 (365)
T ss_dssp EEEEECSSEEEEEEEC-------CCCCEEEEEESSC-------CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSS--C
T ss_pred EEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC-------ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCC--C
Confidence 679999999999994 347889999998432 2457888888888887 999999999999877 7
Q ss_pred EEEEEEecCCCChhhhhhc
Q 012224 435 RMLVFDYASNGTLYEHLHC 453 (468)
Q Consensus 435 ~~lv~ey~~~GsL~~~L~~ 453 (468)
.++||||+++|+|.++++.
T Consensus 142 ~~lv~e~~~~g~L~~~l~~ 160 (365)
T 3e7e_A 142 SVLVGELYSYGTLLNAINL 160 (365)
T ss_dssp EEEEECCCCSCBHHHHHHH
T ss_pred cEEEEeccCCCcHHHHHHH
Confidence 9999999999999999974
No 292
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=99.02 E-value=4.2e-10 Score=107.55 Aligned_cols=89 Identities=26% Similarity=0.258 Sum_probs=74.1
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccc-----cchhhHHHHHHHHHHHhcCC-CCCccceeeEEEcCCCCcEE
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEH-----WTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFTRM 436 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~-----~~~~~~~~f~~e~~~l~~l~-H~nlv~l~g~~~~~~~~~~~ 436 (468)
+.||+|+||.||+|... +|+.||||.+...... ......+.+.+|++++.+++ |+||+++++++.... ..+
T Consensus 23 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~--~~~ 100 (298)
T 1phk_A 23 EILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNT--FFF 100 (298)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS--EEE
T ss_pred eeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCC--eEE
Confidence 67999999999999986 7889999998643211 01123567889999999996 999999999998876 899
Q ss_pred EEEEecCCCChhhhhhcC
Q 012224 437 LVFDYASNGTLYEHLHCK 454 (468)
Q Consensus 437 lv~ey~~~GsL~~~L~~~ 454 (468)
+|+||+++|+|.+++..+
T Consensus 101 lv~e~~~~~~L~~~l~~~ 118 (298)
T 1phk_A 101 LVFDLMKKGELFDYLTEK 118 (298)
T ss_dssp EEEECCTTCBHHHHHHHH
T ss_pred EEEeccCCCcHHHHHhcc
Confidence 999999999999999753
No 293
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=99.02 E-value=4.5e-10 Score=108.21 Aligned_cols=88 Identities=11% Similarity=0.087 Sum_probs=74.6
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEec
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~ 442 (468)
+.||+|+||.||+|... +++.||||++..... ......+.|.+|++++.+++|+||+++++++...+ ..++|+||+
T Consensus 40 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~e~~ 116 (309)
T 2h34_A 40 RLVGRGGMGDVYEAEDTVRERIVALKLMSETLS-SDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDG--QLYVDMRLI 116 (309)
T ss_dssp EEEEECSSSEEEEEEETTTTEEEEEEECGGGGG-GSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT--EEEEEEECC
T ss_pred EEEcCCCCeeEEEEEEcCCCeEEEEEecCcccc-cCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCC--eEEEEEEec
Confidence 68999999999999986 788999999853321 12233578999999999999999999999998876 899999999
Q ss_pred CCCChhhhhhcC
Q 012224 443 SNGTLYEHLHCK 454 (468)
Q Consensus 443 ~~GsL~~~L~~~ 454 (468)
++|+|.+++...
T Consensus 117 ~~~~L~~~l~~~ 128 (309)
T 2h34_A 117 NGVDLAAMLRRQ 128 (309)
T ss_dssp CCEEHHHHHHHH
T ss_pred CCCCHHHHHHhc
Confidence 999999999753
No 294
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=99.02 E-value=3.6e-10 Score=109.95 Aligned_cols=86 Identities=23% Similarity=0.312 Sum_probs=72.1
Q ss_pred hHhccCCceEEEEEEEC-CC-----CeEEEEEEeecccccchhhHHHHHHHHHHHhcC-CCCCccceeeEEEcCCCCcEE
Q 012224 364 NIIGSSPDSLVYKGTMK-GG-----PEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRM 436 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g-----~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l-~H~nlv~l~g~~~~~~~~~~~ 436 (468)
+.||+|+||.||+|... .+ ..||||.+.... .....+.|.+|++++.++ +|+||++++++|...+ ..+
T Consensus 52 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~--~~~ 126 (333)
T 2i1m_A 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA---HADEKEALMSELKIMSHLGQHENIVNLLGACTHGG--PVL 126 (333)
T ss_dssp EEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTC---CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--SCE
T ss_pred eEeccCCCcceEEEEecCCCcccchhHHHHHhccccc---ChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCC--ceE
Confidence 78999999999999874 23 479999984322 123456799999999999 8999999999998876 789
Q ss_pred EEEEecCCCChhhhhhcC
Q 012224 437 LVFDYASNGTLYEHLHCK 454 (468)
Q Consensus 437 lv~ey~~~GsL~~~L~~~ 454 (468)
+||||+++|+|.+++...
T Consensus 127 lv~e~~~~g~L~~~l~~~ 144 (333)
T 2i1m_A 127 VITEYCCYGDLLNFLRRK 144 (333)
T ss_dssp EEEECCTTEEHHHHHHHH
T ss_pred EEEecCCCCcHHHHHHHh
Confidence 999999999999999753
No 295
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=99.02 E-value=2.3e-10 Score=108.59 Aligned_cols=89 Identities=22% Similarity=0.242 Sum_probs=71.6
Q ss_pred hHhccCCceEEEEEEECC----CCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEE
Q 012224 364 NIIGSSPDSLVYKGTMKG----GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~~----g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ 439 (468)
+.||+|+||.||+|+..+ +..||||.+.... .....+.|.+|++++.+++|+||+++++++.+. ..++|+
T Consensus 18 ~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~~~~v~ 91 (281)
T 3cc6_A 18 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC---TLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE---PTWIIM 91 (281)
T ss_dssp EEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTS---CHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS---SCEEEE
T ss_pred EEEEecCCeeEEEeEEcCCCCCcceEEEEeccccc---CchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC---CCEEEE
Confidence 689999999999998642 2358999874321 223457899999999999999999999998754 478999
Q ss_pred EecCCCChhhhhhcCCCCc
Q 012224 440 DYASNGTLYEHLHCKSSSL 458 (468)
Q Consensus 440 ey~~~GsL~~~L~~~~~~~ 458 (468)
||+++|+|.++++.....+
T Consensus 92 e~~~~~~L~~~l~~~~~~~ 110 (281)
T 3cc6_A 92 ELYPYGELGHYLERNKNSL 110 (281)
T ss_dssp ECCTTCBHHHHHHHHTTTC
T ss_pred ecCCCCCHHHHHHhccccC
Confidence 9999999999997654433
No 296
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=99.02 E-value=1e-10 Score=112.06 Aligned_cols=85 Identities=14% Similarity=0.185 Sum_probs=58.3
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEec
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~ 442 (468)
+.||+|+||.||+|... ++..||||++..... ....+++.+|++++.+++|+||+++++++...+ ..++|+||+
T Consensus 21 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 95 (303)
T 2vwi_A 21 EVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC---QTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKD--ELWLVMKLL 95 (303)
T ss_dssp EECC---CCCEEEEEC----CEEEEECCC-------------------CCCCCCCTTBCCEEEEEESSS--CEEEEEECC
T ss_pred heeccccceEEEEEEECCCCcEEEEEEEEhhhc---chhHHHHHHHHHHHhhcCCCCEeeEEEEEeecC--CcEEEehhc
Confidence 68999999999999865 789999998853321 123467899999999999999999999999877 799999999
Q ss_pred CCCChhhhhhc
Q 012224 443 SNGTLYEHLHC 453 (468)
Q Consensus 443 ~~GsL~~~L~~ 453 (468)
++|+|.+++..
T Consensus 96 ~~~~L~~~l~~ 106 (303)
T 2vwi_A 96 SGGSVLDIIKH 106 (303)
T ss_dssp TTCBHHHHHHH
T ss_pred cCCchHHHHHH
Confidence 99999999963
No 297
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=99.02 E-value=2.3e-10 Score=111.86 Aligned_cols=87 Identities=18% Similarity=0.249 Sum_probs=71.9
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEec
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~ 442 (468)
+.||+|+||.||+|... +|+.||||++...... .....+.+.+|++++.+++|+||+++++++.... ..++||||+
T Consensus 15 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~--~~~lv~E~~ 91 (336)
T 3h4j_B 15 ETLGEGSFGKVKLATHYKTQQKVALKFISRQLLK-KSDMHMRVEREISYLKLLRHPHIIKLYDVITTPT--DIVMVIEYA 91 (336)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHH-HTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEEECCC
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEEehHHcc-chhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC--EEEEEEECC
Confidence 67999999999999974 7899999998532111 1112357899999999999999999999999876 899999999
Q ss_pred CCCChhhhhhcC
Q 012224 443 SNGTLYEHLHCK 454 (468)
Q Consensus 443 ~~GsL~~~L~~~ 454 (468)
+|+|.+++..+
T Consensus 92 -~g~l~~~l~~~ 102 (336)
T 3h4j_B 92 -GGELFDYIVEK 102 (336)
T ss_dssp -CEEHHHHHHHH
T ss_pred -CCcHHHHHHHc
Confidence 78999998654
No 298
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=99.01 E-value=1.7e-10 Score=113.06 Aligned_cols=92 Identities=23% Similarity=0.233 Sum_probs=71.1
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccc-cchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEe
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEH-WTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~-~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey 441 (468)
+.||+|+||.||+|... +|+.||||++...... ......+.+.+|++++.+++|+||+++++++...+ ..++|+||
T Consensus 16 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~ 93 (346)
T 1ua2_A 16 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKS--NISLVFDF 93 (346)
T ss_dssp EEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTT--CCEEEEEC
T ss_pred eEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCC--ceEEEEEc
Confidence 78999999999999986 6899999998543211 11112346889999999999999999999998776 78999999
Q ss_pred cCCCChhhhhhcCCCCc
Q 012224 442 ASNGTLYEHLHCKSSSL 458 (468)
Q Consensus 442 ~~~GsL~~~L~~~~~~~ 458 (468)
+++ +|.+++......+
T Consensus 94 ~~~-~l~~~~~~~~~~~ 109 (346)
T 1ua2_A 94 MET-DLEVIIKDNSLVL 109 (346)
T ss_dssp CSE-EHHHHHTTCCSSC
T ss_pred CCC-CHHHHHHhcCcCC
Confidence 986 8999987655433
No 299
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=99.01 E-value=3.9e-10 Score=109.26 Aligned_cols=88 Identities=15% Similarity=0.208 Sum_probs=69.1
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccc----cchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEE
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEH----WTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~----~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv 438 (468)
+.||+|+||.||+|... +|+.||||.+...... ........|.+|++++.+++|+||+++++++... ..++|
T Consensus 16 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~~~lv 92 (322)
T 2ycf_A 16 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE---DYYIV 92 (322)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS---SEEEE
T ss_pred eEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC---ceEEE
Confidence 78999999999999886 6889999998533210 0111234688999999999999999999999764 48999
Q ss_pred EEecCCCChhhhhhcC
Q 012224 439 FDYASNGTLYEHLHCK 454 (468)
Q Consensus 439 ~ey~~~GsL~~~L~~~ 454 (468)
|||+++|+|.+++...
T Consensus 93 ~e~~~~~~L~~~~~~~ 108 (322)
T 2ycf_A 93 LELMEGGELFDKVVGN 108 (322)
T ss_dssp EECCTTEETHHHHSTT
T ss_pred EecCCCCcHHHHHhcc
Confidence 9999999999998754
No 300
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=99.01 E-value=1.3e-10 Score=112.83 Aligned_cols=89 Identities=22% Similarity=0.331 Sum_probs=69.5
Q ss_pred hHhccCCceEEEEEEEC-CCCe----EEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEE
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPE----IAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~----vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv 438 (468)
+.||+|+||.||+|... +|.. ||+|.+..... ....+.+.+|+.++++++|+||++++++|.+. ..++|
T Consensus 19 ~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~---~~~~v 92 (325)
T 3kex_A 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSG---RQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGS---SLQLV 92 (325)
T ss_dssp EEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTS---CSCBCSCCHHHHHHHTCCCTTBCCEEEEECBS---SEEEE
T ss_pred eeeeecCCceEEEEEEcCCCceEEEEEEEEecccccc---HHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCC---ccEEE
Confidence 67999999999999875 5555 67776632221 11234678899999999999999999999753 58999
Q ss_pred EEecCCCChhhhhhcCCCCc
Q 012224 439 FDYASNGTLYEHLHCKSSSL 458 (468)
Q Consensus 439 ~ey~~~GsL~~~L~~~~~~~ 458 (468)
+||+++|+|.++++.....+
T Consensus 93 ~e~~~~~~L~~~l~~~~~~~ 112 (325)
T 3kex_A 93 TQYLPLGSLLDHVRQHRGAL 112 (325)
T ss_dssp EECCTTCBSHHHHHSSGGGS
T ss_pred EEeCCCCCHHHHHHHccccC
Confidence 99999999999998754433
No 301
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=99.01 E-value=1.2e-10 Score=114.76 Aligned_cols=89 Identities=18% Similarity=0.151 Sum_probs=72.5
Q ss_pred hHhccCCceEEEEEEE----CCCCeEEEEEEeecccccchhhHHHHHHHHHHHhcC-CCCCccceeeEEEcCCCCcEEEE
Q 012224 364 NIIGSSPDSLVYKGTM----KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLV 438 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~----~~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l-~H~nlv~l~g~~~~~~~~~~~lv 438 (468)
+.||+|+||.||+++. .+|+.||||++............+.+.+|++++.++ +|+||+++++++.... ..++|
T Consensus 60 ~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~--~~~lv 137 (355)
T 1vzo_A 60 KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET--KLHLI 137 (355)
T ss_dssp EEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT--EEEEE
T ss_pred EEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc--eEEEE
Confidence 7899999999999987 378999999985432111112234677899999999 6999999999998876 78999
Q ss_pred EEecCCCChhhhhhcC
Q 012224 439 FDYASNGTLYEHLHCK 454 (468)
Q Consensus 439 ~ey~~~GsL~~~L~~~ 454 (468)
|||+++|+|.+++...
T Consensus 138 ~e~~~~~~L~~~l~~~ 153 (355)
T 1vzo_A 138 LDYINGGELFTHLSQR 153 (355)
T ss_dssp ECCCCSCBHHHHHHHH
T ss_pred eecCCCCCHHHHHHHc
Confidence 9999999999999754
No 302
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=99.01 E-value=6.3e-10 Score=108.26 Aligned_cols=87 Identities=22% Similarity=0.345 Sum_probs=73.6
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEec
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~ 442 (468)
+.||+|+||.||+|... +|+.||||++..... .....+.+.+|++++.+++|+||++++++|.+.. ..++||||+
T Consensus 31 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~ 106 (331)
T 4aaa_A 31 GLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDD--DKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKK--RWYLVFEFV 106 (331)
T ss_dssp EEGGGGTTSSEEEEEETTTCCEEEEEEEESCSS--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEEECC
T ss_pred eEEeecCCEEEEEEEECCCCceEEEEEEecCCC--chHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCC--EEEEEEecC
Confidence 68999999999999986 689999999854322 2234567889999999999999999999999876 889999999
Q ss_pred CCCChhhhhhcC
Q 012224 443 SNGTLYEHLHCK 454 (468)
Q Consensus 443 ~~GsL~~~L~~~ 454 (468)
++|+|.+++...
T Consensus 107 ~~~~l~~~~~~~ 118 (331)
T 4aaa_A 107 DHTILDDLELFP 118 (331)
T ss_dssp SEEHHHHHHHST
T ss_pred CcchHHHHHhhc
Confidence 999998886543
No 303
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=99.01 E-value=6.6e-10 Score=105.75 Aligned_cols=87 Identities=22% Similarity=0.229 Sum_probs=74.6
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEec
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~ 442 (468)
+.||+|+||.||+|... +++.||||++...... ....+.|.+|++++.+++|+||+++++++.... ..++|+||+
T Consensus 28 ~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 103 (287)
T 2wei_A 28 CMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK--NKDTSTILREVELLKKLDHPNIMKLFEILEDSS--SFYIVGELY 103 (287)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBS--SSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEEEECCC
T ss_pred EEEcCCCCEEEEEEEEcCCCcEEEEEEecccccc--hHHHHHHHHHHHHHHhccCCCccEEEEEEeCCC--eEEEEEEcc
Confidence 78999999999999986 7899999998543221 223568999999999999999999999998876 899999999
Q ss_pred CCCChhhhhhcC
Q 012224 443 SNGTLYEHLHCK 454 (468)
Q Consensus 443 ~~GsL~~~L~~~ 454 (468)
++|+|.+++...
T Consensus 104 ~~~~L~~~l~~~ 115 (287)
T 2wei_A 104 TGGELFDEIIKR 115 (287)
T ss_dssp CSCBHHHHHHHH
T ss_pred CCCCHHHHHHhc
Confidence 999999988643
No 304
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=99.00 E-value=3.7e-10 Score=107.00 Aligned_cols=83 Identities=20% Similarity=0.301 Sum_probs=69.4
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcC------------
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRES------------ 430 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~------------ 430 (468)
+.||+|+||.||+|... +|+.||||++.... +.+.+|++++.+++|+||+++++++...
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~ 88 (284)
T 2a19_B 17 ELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN--------EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSS 88 (284)
T ss_dssp EEEECSSSCCEEEEEETTTCCEEEEEEEECCS--------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---------
T ss_pred eeeccCCceEEEEEEEcCCCeEEEEEEecccc--------HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccccccc
Confidence 78999999999999987 79999999985432 2467899999999999999999988541
Q ss_pred --CCCcEEEEEEecCCCChhhhhhcC
Q 012224 431 --SPFTRMLVFDYASNGTLYEHLHCK 454 (468)
Q Consensus 431 --~~~~~~lv~ey~~~GsL~~~L~~~ 454 (468)
.....++||||+++|+|.++++..
T Consensus 89 ~~~~~~~~lv~e~~~~~~L~~~l~~~ 114 (284)
T 2a19_B 89 RSKTKCLFIQMEFCDKGTLEQWIEKR 114 (284)
T ss_dssp CCEEEEEEEEECCCCSCBHHHHHHHG
T ss_pred ccCcceEEEEEeccCCCCHHHHHhhc
Confidence 111478999999999999999754
No 305
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=99.00 E-value=2.6e-10 Score=112.28 Aligned_cols=88 Identities=17% Similarity=0.035 Sum_probs=73.5
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcC-CCCCccceeeEEEcCCCCcEEEEEEe
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDY 441 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l-~H~nlv~l~g~~~~~~~~~~~lv~ey 441 (468)
++||+|+||.||+|+.. +|+.||||++..... ......+.+..|.+++..+ +|+||+++++++.+.+ ..++||||
T Consensus 26 ~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~-~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~--~~~lv~E~ 102 (353)
T 2i0e_A 26 MVLGKGSFGKVMLSERKGTDELYAVKILKKDVV-IQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMD--RLYFVMEY 102 (353)
T ss_dssp EEEEEETTEEEEEEEETTEEEEEEEEEEEHHHH-HHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSS--EEEEEEEC
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHh-hcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCC--EEEEEEeC
Confidence 78999999999999987 588999999854321 1112356788999999988 8999999999998876 89999999
Q ss_pred cCCCChhhhhhcC
Q 012224 442 ASNGTLYEHLHCK 454 (468)
Q Consensus 442 ~~~GsL~~~L~~~ 454 (468)
+++|+|.+++...
T Consensus 103 ~~gg~L~~~l~~~ 115 (353)
T 2i0e_A 103 VNGGDLMYHIQQV 115 (353)
T ss_dssp CCSCBHHHHHHHH
T ss_pred CCCCcHHHHHHhc
Confidence 9999999999753
No 306
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=99.00 E-value=2.5e-10 Score=110.07 Aligned_cols=89 Identities=22% Similarity=0.229 Sum_probs=72.9
Q ss_pred hHhccCCceEEEEEEE------CCCCeEEEEEEeecccccchhhHHHHHHHHHHHhcC-CCCCccceeeEEEcCCCCcEE
Q 012224 364 NIIGSSPDSLVYKGTM------KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRM 436 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~------~~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l-~H~nlv~l~g~~~~~~~~~~~ 436 (468)
+.||+|+||.||+|.. .+++.||||.+.... .....+.|.+|++++.++ +|+||++++++|...+ ...+
T Consensus 33 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~-~~~~ 108 (316)
T 2xir_A 33 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA---THSEHRALMSELKILIHIGHHLNVVNLLGACTKPG-GPLM 108 (316)
T ss_dssp EEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC---CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTT-SCCE
T ss_pred eEEcCCCceeEEEEEEecCCccccceEEEEEecccCC---CcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCC-CceE
Confidence 7899999999999974 256789999985322 223456799999999999 7999999999997654 1489
Q ss_pred EEEEecCCCChhhhhhcCCC
Q 012224 437 LVFDYASNGTLYEHLHCKSS 456 (468)
Q Consensus 437 lv~ey~~~GsL~~~L~~~~~ 456 (468)
+|+||+++|+|.+++.....
T Consensus 109 lv~e~~~~~~L~~~l~~~~~ 128 (316)
T 2xir_A 109 VIVEFCKFGNLSTYLRSKRN 128 (316)
T ss_dssp EEEECCTTEEHHHHHHTCTT
T ss_pred EEEEcCCCCcHHHHHHhccc
Confidence 99999999999999986543
No 307
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=99.00 E-value=2.3e-10 Score=111.36 Aligned_cols=87 Identities=9% Similarity=0.043 Sum_probs=72.3
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcC-CCCCccceeeEEEcCCCCcEEEEEEe
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDY 441 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l-~H~nlv~l~g~~~~~~~~~~~lv~ey 441 (468)
+.||+|+||.||+|... +|+.||||.+..... .+.+.+|++++.++ +|+||+++++++...+ ..++||||
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~--~~~lv~e~ 86 (330)
T 2izr_A 15 KKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR------APQLHLEYRFYKQLGSGDGIPQVYYFGPCGK--YNAMVLEL 86 (330)
T ss_dssp EECCC-CTTSEEEEEETTTTEEEEEEEEETTCS------SCCHHHHHHHHHHHCSCTTSCCEEEEEEETT--EEEEEEEC
T ss_pred EEeeccCCceEEEEEECCCCcEEEEEEeccccc------hHHHHHHHHHHHHhhCCCCCCEEEEEEecCC--ccEEEEEe
Confidence 67999999999999874 789999999854321 23588999999999 9999999999998876 78999999
Q ss_pred cCCCChhhhhhcCCCCcc
Q 012224 442 ASNGTLYEHLHCKSSSLY 459 (468)
Q Consensus 442 ~~~GsL~~~L~~~~~~~~ 459 (468)
+ +|+|.+++...+..++
T Consensus 87 ~-~~~L~~~~~~~~~~~~ 103 (330)
T 2izr_A 87 L-GPSLEDLFDLCDRTFS 103 (330)
T ss_dssp C-CCBHHHHHHHTTTCCC
T ss_pred C-CCCHHHHHHHcCCCCC
Confidence 9 9999999986544443
No 308
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=99.00 E-value=1.6e-10 Score=113.07 Aligned_cols=84 Identities=10% Similarity=0.033 Sum_probs=71.2
Q ss_pred hHhccCCceEEEEEEECCCCeEEEEEEeecccccc-------------hhhHHHHHHHHHHHhcCCCCCccceeeEEEcC
Q 012224 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWT-------------GYLELYFQREVADLARINHENTGKLLGYCRES 430 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~-------------~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~ 430 (468)
+.||+|+||.||+|.. +|+.||||++........ ....+.|.+|++++.+++|+||+++++++...
T Consensus 37 ~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 115 (348)
T 2pml_X 37 RTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNY 115 (348)
T ss_dssp EEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCSEEEESS
T ss_pred EEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEEEEEeeC
Confidence 6799999999999999 899999999864321100 01126899999999999999999999999987
Q ss_pred CCCcEEEEEEecCCCChhhh
Q 012224 431 SPFTRMLVFDYASNGTLYEH 450 (468)
Q Consensus 431 ~~~~~~lv~ey~~~GsL~~~ 450 (468)
+ ..++||||+++|+|.++
T Consensus 116 ~--~~~lv~e~~~~~~L~~~ 133 (348)
T 2pml_X 116 D--EVYIIYEYMENDSILKF 133 (348)
T ss_dssp S--EEEEEEECCTTCBSSEE
T ss_pred C--eEEEEEeccCCCcHHHH
Confidence 6 89999999999999999
No 309
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=99.00 E-value=7.9e-10 Score=104.44 Aligned_cols=87 Identities=17% Similarity=0.242 Sum_probs=62.4
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEec
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~ 442 (468)
+.||+|+||.||+|... +|+.||+|++...... .....+.+.+|++++++++|+||+++++++.+.+ ..++|+||+
T Consensus 19 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 95 (275)
T 2eue_A 19 KTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLA-KSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKD--EIIMVIEYA 95 (275)
T ss_dssp C---------EEEEECTTTCCEEEEEEECSCC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--CEEEEEECC
T ss_pred EEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcc-hHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCC--eEEEEehhc
Confidence 67999999999999875 7899999998543211 1223567899999999999999999999998876 799999999
Q ss_pred CCCChhhhhhcC
Q 012224 443 SNGTLYEHLHCK 454 (468)
Q Consensus 443 ~~GsL~~~L~~~ 454 (468)
+|+|.+++...
T Consensus 96 -~~~l~~~~~~~ 106 (275)
T 2eue_A 96 -GNELFDYIVQR 106 (275)
T ss_dssp -CEEHHHHHHTS
T ss_pred -CCcHHHHHHhc
Confidence 67888888654
No 310
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=99.00 E-value=2.5e-11 Score=113.85 Aligned_cols=127 Identities=23% Similarity=0.176 Sum_probs=89.1
Q ss_pred CCCCccceeeCCCCCCEEEEEecC---CCCcccCCcc------------------------ccCCCCCCE--EEccCcc-
Q 012224 56 DPCHWTGIACSDARDRVLKINISG---SSLKGFLAPE------------------------LGLLTYLQE--LILHGNN- 105 (468)
Q Consensus 56 ~~c~w~gv~C~~~~~~v~~L~L~~---n~l~g~~p~~------------------------l~~l~~L~~--L~Ls~N~- 105 (468)
..|+|.|+.|+....+|..+-..+ ..+.|.++++ +...+.|.. ++++.|.
T Consensus 76 ~l~~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N~~ 155 (267)
T 3rw6_A 76 ALKAVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKLIMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNRR 155 (267)
T ss_dssp HHHHTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHHHHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTTSH
T ss_pred HHHhcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHHHHHhccchhccccCHHHcCCCcchhhcCccccCCHH
Confidence 368899999986455776665544 2333444321 222233333 5666773
Q ss_pred --ccccCChhhcCCCCCCEEEccCCCCCC--CCCcCCCCCcccceeecccccCcccCChhccCCC--CCcEEeccCCCCC
Q 012224 106 --LIGIIPKELGLLKRLKILDLGTNQLTG--PIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLI--SLEELHLDRNRLQ 179 (468)
Q Consensus 106 --l~g~ip~~~~~l~~L~~L~Ls~N~l~g--~iP~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~--~L~~L~ls~N~l~ 179 (468)
+.+.++....++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|.++
T Consensus 156 ~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~ 233 (267)
T 3rw6_A 156 SCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLC 233 (267)
T ss_dssp HHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTG
T ss_pred HHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCc
Confidence 333344444678999999999999998 5667778999999999999999964 3444444 9999999999999
Q ss_pred ccCCC
Q 012224 180 GAVPA 184 (468)
Q Consensus 180 g~ip~ 184 (468)
+.+|.
T Consensus 234 ~~~~~ 238 (267)
T 3rw6_A 234 DTFRD 238 (267)
T ss_dssp GGCSS
T ss_pred cccCc
Confidence 88774
No 311
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=98.99 E-value=1e-10 Score=113.58 Aligned_cols=89 Identities=24% Similarity=0.276 Sum_probs=71.1
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEec
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~ 442 (468)
+.||+|+||.||+|... +|+.||||++...... .....+.+|++++.+++|+||+++++++...+ ..++||||+
T Consensus 8 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~ 82 (324)
T 3mtl_A 8 DKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEE---GAPCTAIREVSLLKDLKHANIVTLHDIIHTEK--SLTLVFEYL 82 (324)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECC---------CCCCCCCHHHHSCCCCTTBCCEEEEEECSS--CEEEEEECC
T ss_pred EEEcCCCCEEEEEEEECCCCcEEEEEEEeccccc---ccchhHHHHHHHHHhcCCCCCCeeeeEEeeCC--EEEEEeccc
Confidence 67999999999999986 7899999998533211 11224567999999999999999999998876 799999999
Q ss_pred CCCChhhhhhcCCCCc
Q 012224 443 SNGTLYEHLHCKSSSL 458 (468)
Q Consensus 443 ~~GsL~~~L~~~~~~~ 458 (468)
+ |+|.+++......+
T Consensus 83 ~-~~l~~~~~~~~~~~ 97 (324)
T 3mtl_A 83 D-KDLKQYLDDCGNII 97 (324)
T ss_dssp S-EEHHHHHHHTTTCC
T ss_pred c-cCHHHHHHhcCCCC
Confidence 8 69999998655433
No 312
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=98.99 E-value=5.6e-10 Score=106.77 Aligned_cols=83 Identities=23% Similarity=0.306 Sum_probs=66.1
Q ss_pred hHhccCCceEEEEEEECCCCeEEEEEEeecccccchhhHHHHHHHHHHHhc--CCCCCccceeeEEEcCC--CCcEEEEE
Q 012224 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLAR--INHENTGKLLGYCRESS--PFTRMLVF 439 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~--l~H~nlv~l~g~~~~~~--~~~~~lv~ 439 (468)
+.||+|+||.||+|+. +|+.||||++... ..+.+..|.+++.. ++|+||+++++++.... ....++|+
T Consensus 14 ~~lg~G~~g~V~~~~~-~~~~vavK~~~~~-------~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~ 85 (301)
T 3q4u_A 14 ECVGKGRYGEVWRGSW-QGENVAVKIFSSR-------DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLIT 85 (301)
T ss_dssp EEEEECSSEEEEEEEE-TTEEEEEEEECGG-------GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeccCCCcEEEEEEE-CCEEEEEEEeccc-------cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEeh
Confidence 6899999999999988 6889999998432 23456667766665 89999999999976532 12478999
Q ss_pred EecCCCChhhhhhcC
Q 012224 440 DYASNGTLYEHLHCK 454 (468)
Q Consensus 440 ey~~~GsL~~~L~~~ 454 (468)
||+++|+|.++++..
T Consensus 86 e~~~~g~L~~~l~~~ 100 (301)
T 3q4u_A 86 HYHEMGSLYDYLQLT 100 (301)
T ss_dssp CCCTTCBHHHHHTTC
T ss_pred hhccCCCHHHHHhhc
Confidence 999999999999643
No 313
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=98.99 E-value=5.6e-10 Score=106.79 Aligned_cols=83 Identities=25% Similarity=0.335 Sum_probs=66.6
Q ss_pred hHhccCCceEEEEEEECCCCeEEEEEEeecccccchhhHHHHHHHHHHHhc--CCCCCccceeeEEEcCCCC--cEEEEE
Q 012224 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLAR--INHENTGKLLGYCRESSPF--TRMLVF 439 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~--l~H~nlv~l~g~~~~~~~~--~~~lv~ 439 (468)
+.||+|+||.||+|+.. |+.||||++... ..+.+.+|.+++.. ++|+||+++++++...... ..++|+
T Consensus 9 ~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-------~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~ 80 (303)
T 3gxj_A 9 ESIGKGRFGEVWRGKWR-GEEVAVKIFSSR-------EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 80 (303)
T ss_dssp EEEEECSSSEEEEC-CT-TSCEEEEECC-T-------THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEEE
T ss_pred hhccCCCCeEEEEEEEc-CcceEEEEeccc-------chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEEEE
Confidence 67999999999999874 889999998422 24567888888887 7999999999998765421 478999
Q ss_pred EecCCCChhhhhhcC
Q 012224 440 DYASNGTLYEHLHCK 454 (468)
Q Consensus 440 ey~~~GsL~~~L~~~ 454 (468)
||+++|+|.++++..
T Consensus 81 e~~~~g~L~~~l~~~ 95 (303)
T 3gxj_A 81 DYHEHGSLFDYLNRY 95 (303)
T ss_dssp ECCTTCCHHHHHHHC
T ss_pred eccCCCCHHHHHhcc
Confidence 999999999999654
No 314
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=98.99 E-value=6.6e-10 Score=106.55 Aligned_cols=89 Identities=20% Similarity=0.168 Sum_probs=70.1
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEec
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~ 442 (468)
+.||+|+||.||++... ++..+|||.+............+.|.+|++++.+++|+||+++++++...+....++||||+
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~ 90 (305)
T 2wtk_C 11 DLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYC 90 (305)
T ss_dssp CEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEEEEECC
T ss_pred eEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEEEehhc
Confidence 67999999999999875 78899999985432111123457899999999999999999999998644333689999999
Q ss_pred CCCChhhhhhc
Q 012224 443 SNGTLYEHLHC 453 (468)
Q Consensus 443 ~~GsL~~~L~~ 453 (468)
++| |.+++..
T Consensus 91 ~~~-l~~~~~~ 100 (305)
T 2wtk_C 91 VCG-MQEMLDS 100 (305)
T ss_dssp SEE-HHHHHHH
T ss_pred cCC-HHHHHHh
Confidence 987 7777764
No 315
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=98.99 E-value=4.8e-10 Score=108.84 Aligned_cols=87 Identities=25% Similarity=0.374 Sum_probs=70.6
Q ss_pred hHhccCCceEEEEEEEC-CCCeE--EEEEEeecccccchhhHHHHHHHHHHHhcC-CCCCccceeeEEEcCCCCcEEEEE
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEI--AVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVF 439 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~v--avK~l~~~~~~~~~~~~~~f~~e~~~l~~l-~H~nlv~l~g~~~~~~~~~~~lv~ 439 (468)
+.||+|+||.||+|... +|..+ |||++.... .....+.|.+|++++.++ +|+||+++++++.+.+ ..++||
T Consensus 31 ~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~--~~~lv~ 105 (327)
T 1fvr_A 31 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA---SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG--YLYLAI 105 (327)
T ss_dssp EEEECGGGCEEEEEEEEETTEEEEEEEEEEECC---------CHHHHHHHHHTTCCCCTTBCCEEEEEEETT--EEEEEE
T ss_pred eeeecCCCceEEEEEEccCCcccceeeeeecccc---chHHHHHHHHHHHHHHhccCCCchhhhceeeeeCC--ceEEEE
Confidence 68999999999999875 56644 888875321 122345799999999999 9999999999998876 899999
Q ss_pred EecCCCChhhhhhcCC
Q 012224 440 DYASNGTLYEHLHCKS 455 (468)
Q Consensus 440 ey~~~GsL~~~L~~~~ 455 (468)
||+++|+|.++++...
T Consensus 106 e~~~~~~L~~~l~~~~ 121 (327)
T 1fvr_A 106 EYAPHGNLLDFLRKSR 121 (327)
T ss_dssp CCCTTCBHHHHHHTTC
T ss_pred ecCCCCCHHHHHHhcc
Confidence 9999999999998653
No 316
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=98.98 E-value=6.6e-10 Score=105.94 Aligned_cols=85 Identities=22% Similarity=0.255 Sum_probs=69.3
Q ss_pred HhccCCceEEEEEEEC---CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEe
Q 012224 365 IIGSSPDSLVYKGTMK---GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (468)
Q Consensus 365 ~lg~G~~g~vy~~~~~---~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey 441 (468)
.||+|+||.||+|.+. ++..||||.+..... .....++|.+|++++.+++|+||+++++++.. + ..++|+||
T Consensus 24 ~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~--~~~lv~e~ 98 (291)
T 1xbb_A 24 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN--DPALKDELLAEANVMQQLDNPYIVRMIGICEA-E--SWMLVMEM 98 (291)
T ss_dssp EEEECSSEEEEEEEEECSSSEEEEEEEEEC-------CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-S--SEEEEEEC
T ss_pred ccccccCeeeEeeeecCCCceeeEEEEeeccccc--CHHHHHHHHHHHHHHHhCCCCCEEEEEEEECC-C--CcEEEEEe
Confidence 7999999999999653 467899999854321 22345789999999999999999999999954 3 68999999
Q ss_pred cCCCChhhhhhcC
Q 012224 442 ASNGTLYEHLHCK 454 (468)
Q Consensus 442 ~~~GsL~~~L~~~ 454 (468)
+++|+|.++++..
T Consensus 99 ~~~~~L~~~l~~~ 111 (291)
T 1xbb_A 99 AELGPLNKYLQQN 111 (291)
T ss_dssp CTTEEHHHHHHHC
T ss_pred CCCCCHHHHHHhC
Confidence 9999999999764
No 317
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=98.98 E-value=4.1e-10 Score=109.57 Aligned_cols=90 Identities=22% Similarity=0.300 Sum_probs=71.8
Q ss_pred hHhccCCceEEEEEEEC-CCCeE----EEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEE
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEI----AVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~v----avK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv 438 (468)
+.||+|+||.||+|... ++..+ |+|.+.... .....+.|.+|++++.+++|+||++++++|... ..++|
T Consensus 21 ~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~---~~~~v 94 (327)
T 3lzb_A 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMASVDNPHVCRLLGICLTS---TVQLI 94 (327)
T ss_dssp EEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCS---SCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESS---SEEEE
T ss_pred EEeeeCCCeEEEEEEEcCCCceEEEEEEEEeecccc---CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecC---CceEE
Confidence 68999999999999875 56554 566553221 223457899999999999999999999999875 48899
Q ss_pred EEecCCCChhhhhhcCCCCcc
Q 012224 439 FDYASNGTLYEHLHCKSSSLY 459 (468)
Q Consensus 439 ~ey~~~GsL~~~L~~~~~~~~ 459 (468)
+||+++|+|.++++.....+.
T Consensus 95 ~~~~~~g~L~~~l~~~~~~~~ 115 (327)
T 3lzb_A 95 TQLMPFGCLLDYVREHKDNIG 115 (327)
T ss_dssp ECCCSSCBHHHHHHHTTTCCC
T ss_pred EEecCCCcHHHHHHhcCCCCC
Confidence 999999999999987655443
No 318
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=98.98 E-value=6.3e-10 Score=107.74 Aligned_cols=86 Identities=22% Similarity=0.284 Sum_probs=66.4
Q ss_pred hHhccCCceEEEEEEECC-C---CeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcE----
Q 012224 364 NIIGSSPDSLVYKGTMKG-G---PEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTR---- 435 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~~-g---~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~---- 435 (468)
+.||+|+||.||+|.... + ..||||.+..... .....+.|.+|++++.+++|+||+++++++.... ..
T Consensus 29 ~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~~~~ 104 (323)
T 3qup_A 29 RMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADII--ASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSR--AKGRLP 104 (323)
T ss_dssp EEEEEETTEEEEEEEC-------CEEEEEEC--------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC---------
T ss_pred ceecccCCeEEEEEEEcccCCcceeEEEEEeccccc--CHHHHHHHHHHHHHHHHCCCCceehhhceeeccc--cccCCC
Confidence 789999999999998763 3 2799999854321 1234678999999999999999999999998765 33
Q ss_pred --EEEEEecCCCChhhhhhc
Q 012224 436 --MLVFDYASNGTLYEHLHC 453 (468)
Q Consensus 436 --~lv~ey~~~GsL~~~L~~ 453 (468)
++|+||+++|+|.+++..
T Consensus 105 ~~~~v~e~~~~~~L~~~l~~ 124 (323)
T 3qup_A 105 IPMVILPFMKHGDLHAFLLA 124 (323)
T ss_dssp CEEEEEECCTTCBHHHHHHH
T ss_pred ccEEEEEeccCCcHHHHHHh
Confidence 899999999999999964
No 319
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=98.98 E-value=4.5e-10 Score=109.29 Aligned_cols=86 Identities=21% Similarity=0.252 Sum_probs=69.6
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEec
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~ 442 (468)
+.||+|+||.||+|... +|+.||||++..... .....+.+.+|++++.+++|+||+++++++...+ ..++||||+
T Consensus 40 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~ 115 (329)
T 3gbz_A 40 TKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHE--EEGVPGTAIREVSLLKELQHRNIIELKSVIHHNH--RLHLIFEYA 115 (329)
T ss_dssp EEEEECSSSEEEEEEETTTTEEEEEEECCCCC----------CHHHHHHGGGCCCTTBCCEEEEEEETT--EEEEEEECC
T ss_pred EEEEecCCeEEEEEEECCCCceEEEEEEccccc--ccccchhHHHHHHHHHHcCCCCcceEEEEEecCC--EEEEEEecC
Confidence 78999999999999865 789999999854321 1223457889999999999999999999999877 899999999
Q ss_pred CCCChhhhhhcC
Q 012224 443 SNGTLYEHLHCK 454 (468)
Q Consensus 443 ~~GsL~~~L~~~ 454 (468)
+ |+|.+++...
T Consensus 116 ~-~~L~~~~~~~ 126 (329)
T 3gbz_A 116 E-NDLKKYMDKN 126 (329)
T ss_dssp S-EEHHHHHHHC
T ss_pred C-CCHHHHHhhc
Confidence 8 5999999754
No 320
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=98.97 E-value=9.9e-10 Score=106.74 Aligned_cols=87 Identities=18% Similarity=0.172 Sum_probs=73.7
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcC-CCCCccceeeEEEcCCCCcEEEEEEe
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDY 441 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l-~H~nlv~l~g~~~~~~~~~~~lv~ey 441 (468)
+.||+|+||.||+|... +|+.||||++...... .....++.+|+.++.++ +|+||+++++++.... ..++||||
T Consensus 35 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~--~~~lv~e~ 110 (327)
T 3lm5_A 35 KELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRG--QDCRAEILHEIAVLELAKSCPRVINLHEVYENTS--EIILILEY 110 (327)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEESEETT--EECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--EEEEEEEC
T ss_pred ceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcc--hHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCC--eEEEEEEe
Confidence 67999999999999886 7999999998543321 12356899999999999 5699999999998876 89999999
Q ss_pred cCCCChhhhhhcC
Q 012224 442 ASNGTLYEHLHCK 454 (468)
Q Consensus 442 ~~~GsL~~~L~~~ 454 (468)
+++|+|.+++...
T Consensus 111 ~~~~~L~~~~~~~ 123 (327)
T 3lm5_A 111 AAGGEIFSLCLPE 123 (327)
T ss_dssp CTTEEGGGGGSSC
T ss_pred cCCCcHHHHHHHh
Confidence 9999999998654
No 321
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=98.96 E-value=3.4e-10 Score=110.55 Aligned_cols=89 Identities=20% Similarity=0.191 Sum_probs=72.7
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeeccccc----chhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEE
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHW----TGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~----~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv 438 (468)
+.||+|+||.||+|... +|+.||||++....... .....+.|.+|++++.+++|+||+++++++.+.+ ..++|
T Consensus 30 ~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~--~~~lv 107 (335)
T 3dls_A 30 SPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG--FFQLV 107 (335)
T ss_dssp EECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS--EEEEE
T ss_pred eEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC--EEEEE
Confidence 78999999999999875 78899999986432110 0112345788999999999999999999998876 88999
Q ss_pred EEecCCC-ChhhhhhcC
Q 012224 439 FDYASNG-TLYEHLHCK 454 (468)
Q Consensus 439 ~ey~~~G-sL~~~L~~~ 454 (468)
|||+..| +|.+++...
T Consensus 108 ~e~~~~g~~l~~~~~~~ 124 (335)
T 3dls_A 108 MEKHGSGLDLFAFIDRH 124 (335)
T ss_dssp EECCTTSCBHHHHHHTC
T ss_pred EEeCCCCccHHHHHHhc
Confidence 9999888 999999754
No 322
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=98.95 E-value=7.1e-10 Score=118.06 Aligned_cols=89 Identities=19% Similarity=0.253 Sum_probs=72.1
Q ss_pred hHhccCCceEEEEEEECC----CCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEE
Q 012224 364 NIIGSSPDSLVYKGTMKG----GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~~----g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ 439 (468)
+.||+|+||.||+|.... +..||||++.... .....+.|.+|+.++++++|+|||++++++.+ + ..++||
T Consensus 396 ~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~--~~~lv~ 469 (656)
T 2j0j_A 396 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCT---SDSVREKFLQEALTMRQFDHPHIVKLIGVITE-N--PVWIIM 469 (656)
T ss_dssp EEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTT---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-S--SCEEEE
T ss_pred eEEeeCCCEEEEEEEEecCCCccEEEEEEEecccC---CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-C--ceEEEE
Confidence 679999999999998742 4568898874321 22345789999999999999999999999864 3 589999
Q ss_pred EecCCCChhhhhhcCCCCc
Q 012224 440 DYASNGTLYEHLHCKSSSL 458 (468)
Q Consensus 440 ey~~~GsL~~~L~~~~~~~ 458 (468)
||+++|+|.++++.+...+
T Consensus 470 E~~~~g~L~~~l~~~~~~l 488 (656)
T 2j0j_A 470 ELCTLGELRSFLQVRKFSL 488 (656)
T ss_dssp ECCTTCBHHHHHHHTTTTC
T ss_pred EcCCCCcHHHHHHhccCCC
Confidence 9999999999998654433
No 323
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=98.94 E-value=8.6e-10 Score=105.41 Aligned_cols=86 Identities=26% Similarity=0.344 Sum_probs=70.2
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEec
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~ 442 (468)
+.||+|+||.||+|... +|+.||||++...... ....+.+.+|++++.+++|+||+++++++...+ ..++||||+
T Consensus 9 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 84 (299)
T 2r3i_A 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTET--EGVPSTAIREISLLKELNHPNIVKLLDVIHTEN--KLYLVFEFL 84 (299)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEC----------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETT--EEEEEEECC
T ss_pred hhhccCCCeeEEEEEEcCCCceEEEEEeecCccc--hhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCC--ceEEEEEcc
Confidence 67999999999999986 7899999998543211 122357889999999999999999999998876 899999999
Q ss_pred CCCChhhhhhcC
Q 012224 443 SNGTLYEHLHCK 454 (468)
Q Consensus 443 ~~GsL~~~L~~~ 454 (468)
+ |+|.+++...
T Consensus 85 ~-~~L~~~~~~~ 95 (299)
T 2r3i_A 85 H-QDLKKFMDAS 95 (299)
T ss_dssp S-EEHHHHHHHT
T ss_pred c-CCHHHHHHhh
Confidence 8 6999999754
No 324
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=98.94 E-value=1.1e-09 Score=105.56 Aligned_cols=88 Identities=25% Similarity=0.339 Sum_probs=67.1
Q ss_pred hHhccCCceEEEEEEEC----CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCC---cEE
Q 012224 364 NIIGSSPDSLVYKGTMK----GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPF---TRM 436 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~----~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~---~~~ 436 (468)
+.||+|+||.||+|... .+..||||.+..... .....+.|.+|++++.+++|+||+++++++...+.. ..+
T Consensus 40 ~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 117 (313)
T 3brb_A 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNS--SQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPM 117 (313)
T ss_dssp EEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CC--CHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-------CEE
T ss_pred cceeecCCeEEEEEEEeccCCceeEEEEEEEecccc--chhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCCcccE
Confidence 67999999999999864 244799999854322 223456799999999999999999999999875411 249
Q ss_pred EEEEecCCCChhhhhhc
Q 012224 437 LVFDYASNGTLYEHLHC 453 (468)
Q Consensus 437 lv~ey~~~GsL~~~L~~ 453 (468)
+|+||+++|+|.+++..
T Consensus 118 ~v~e~~~~~~L~~~l~~ 134 (313)
T 3brb_A 118 VILPFMKYGDLHTYLLY 134 (313)
T ss_dssp EEEECCTTCBHHHHHHH
T ss_pred EEEecccCCCHHHHHHH
Confidence 99999999999999953
No 325
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=98.94 E-value=1.2e-09 Score=105.80 Aligned_cols=86 Identities=19% Similarity=0.312 Sum_probs=72.4
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcC-CCCCccceeeEEEcCC----CCcEEE
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESS----PFTRML 437 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l-~H~nlv~l~g~~~~~~----~~~~~l 437 (468)
+.||+|+||.||+|... +|+.||||++..... ..+.+.+|++++.++ +|+||+++++++.... ....++
T Consensus 30 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~l 104 (326)
T 2x7f_A 30 ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD-----EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWL 104 (326)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECCSS-----TTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEEE
T ss_pred EEeccCCCEEEEEEEECCCCCeEEEEEEecCcc-----cHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEEE
Confidence 78999999999999885 789999999854322 245789999999999 8999999999997632 226899
Q ss_pred EEEecCCCChhhhhhcC
Q 012224 438 VFDYASNGTLYEHLHCK 454 (468)
Q Consensus 438 v~ey~~~GsL~~~L~~~ 454 (468)
||||+++|+|.+++...
T Consensus 105 v~e~~~~~~L~~~l~~~ 121 (326)
T 2x7f_A 105 VMEFCGAGSVTDLIKNT 121 (326)
T ss_dssp EEECCTTEEHHHHHHHS
T ss_pred EEEcCCCCcHHHHHHhc
Confidence 99999999999999764
No 326
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=98.94 E-value=2.5e-09 Score=103.70 Aligned_cols=83 Identities=18% Similarity=0.175 Sum_probs=70.8
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCC-CCCccceeeEEEcCCCCcEEEEEEe
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFTRMLVFDY 441 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~-H~nlv~l~g~~~~~~~~~~~lv~ey 441 (468)
+.||+|+||.||+|... +++.||||++... ..+.+.+|++++.+++ |+||+++++++........++||||
T Consensus 42 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-------~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~ 114 (330)
T 3nsz_A 42 RKLGRGKYSEVFEAINITNNEKVVVKILKPV-------KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEH 114 (330)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECSC-------CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEEC
T ss_pred EEecccCCeEEEEEEECCCCcEEEEEEeccc-------chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEec
Confidence 68999999999999875 7899999998422 2457899999999997 9999999999987433368999999
Q ss_pred cCCCChhhhhhc
Q 012224 442 ASNGTLYEHLHC 453 (468)
Q Consensus 442 ~~~GsL~~~L~~ 453 (468)
+++|+|.++++.
T Consensus 115 ~~~~~l~~~~~~ 126 (330)
T 3nsz_A 115 VNNTDFKQLYQT 126 (330)
T ss_dssp CCCCCHHHHGGG
T ss_pred cCchhHHHHHHh
Confidence 999999998853
No 327
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=98.93 E-value=5.1e-10 Score=106.49 Aligned_cols=89 Identities=22% Similarity=0.266 Sum_probs=64.8
Q ss_pred hHhccCCceEEEEEEEC--CCC--eEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEE
Q 012224 364 NIIGSSPDSLVYKGTMK--GGP--EIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~--~g~--~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ 439 (468)
+.||+|+||.||+|++. +++ .||||++...... .....+.|.+|++++.+++|+||+++++++... ..++|+
T Consensus 24 ~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---~~~~v~ 99 (291)
T 1u46_A 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLS-QPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTP---PMKMVT 99 (291)
T ss_dssp EECC----CCCEEEEEECTTSCEEEEEEEC---------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS---SCEEEE
T ss_pred eeecCCCceeEEEEEeccCCCceeEEEEEEEccCccC-CHHHHHHHHHHHHHHHhCCCCCcccEEEEEccC---CceeeE
Confidence 67999999999999864 344 5899988543211 123457899999999999999999999999865 478999
Q ss_pred EecCCCChhhhhhcCCC
Q 012224 440 DYASNGTLYEHLHCKSS 456 (468)
Q Consensus 440 ey~~~GsL~~~L~~~~~ 456 (468)
||+++|+|.+++.....
T Consensus 100 e~~~~~~L~~~l~~~~~ 116 (291)
T 1u46_A 100 ELAPLGSLLDRLRKHQG 116 (291)
T ss_dssp ECCTTCBHHHHHHHHGG
T ss_pred ecccCCCHHHHHHhccC
Confidence 99999999999976543
No 328
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=98.93 E-value=1.8e-09 Score=105.57 Aligned_cols=86 Identities=20% Similarity=0.208 Sum_probs=73.5
Q ss_pred hHhccCCceEEEEEEECCCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCC--CCccceeeEEEcCCCCcEEEEEEe
Q 012224 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINH--ENTGKLLGYCRESSPFTRMLVFDY 441 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H--~nlv~l~g~~~~~~~~~~~lv~ey 441 (468)
+.||+|+||.||++...+++.||||++..... .....+.|.+|++++.+++| +||+++++++.... ..++|||
T Consensus 15 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~--~~~lv~e- 89 (343)
T 3dbq_A 15 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA--DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ--YIYMVME- 89 (343)
T ss_dssp EEESCCSSEEEEEEECTTSCEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--EEEEEEC-
T ss_pred EEEecCCCeEEEEEEeCCCCEEEEEEeecccc--chHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCC--EEEEEEe-
Confidence 67999999999999988899999999864432 23345789999999999987 99999999999877 8999999
Q ss_pred cCCCChhhhhhcC
Q 012224 442 ASNGTLYEHLHCK 454 (468)
Q Consensus 442 ~~~GsL~~~L~~~ 454 (468)
+.+|+|.+++...
T Consensus 90 ~~~~~L~~~l~~~ 102 (343)
T 3dbq_A 90 CGNIDLNSWLKKK 102 (343)
T ss_dssp CCSEEHHHHHHHS
T ss_pred CCCCCHHHHHHhc
Confidence 5688999999764
No 329
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=98.93 E-value=3e-10 Score=111.84 Aligned_cols=88 Identities=18% Similarity=0.087 Sum_probs=73.7
Q ss_pred HhhH--hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCC-----CCCccceeeEEEcCC
Q 012224 360 EDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-----HENTGKLLGYCRESS 431 (468)
Q Consensus 360 ~~~~--~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~-----H~nlv~l~g~~~~~~ 431 (468)
++|. +.||+|+||.||+|... +++.||||++... ....+.+..|++++.+++ |+|||++++++...+
T Consensus 35 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~ 109 (360)
T 3llt_A 35 NAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-----KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYD 109 (360)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-----HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETT
T ss_pred CEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-----hhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECC
Confidence 4454 78999999999999885 7899999998421 123457788999999887 999999999998876
Q ss_pred CCcEEEEEEecCCCChhhhhhcCC
Q 012224 432 PFTRMLVFDYASNGTLYEHLHCKS 455 (468)
Q Consensus 432 ~~~~~lv~ey~~~GsL~~~L~~~~ 455 (468)
..++||||+ +|+|.+++....
T Consensus 110 --~~~lv~e~~-~~~L~~~~~~~~ 130 (360)
T 3llt_A 110 --HMCLIFEPL-GPSLYEIITRNN 130 (360)
T ss_dssp --EEEEEECCC-CCBHHHHHHHTT
T ss_pred --eeEEEEcCC-CCCHHHHHHhcC
Confidence 899999999 999999998654
No 330
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=98.93 E-value=1.2e-09 Score=106.17 Aligned_cols=83 Identities=25% Similarity=0.346 Sum_probs=66.7
Q ss_pred hHhccCCceEEEEEEECCCCeEEEEEEeecccccchhhHHHHHHHHHHHhcC--CCCCccceeeEEEcCCC--CcEEEEE
Q 012224 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI--NHENTGKLLGYCRESSP--FTRMLVF 439 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l--~H~nlv~l~g~~~~~~~--~~~~lv~ 439 (468)
+.||+|+||.||+|+.. |+.||||++... ....+..|.+++... +|+||+++++++..... ...++||
T Consensus 43 ~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-------~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~ 114 (337)
T 3mdy_A 43 KQIGKGRYGEVWMGKWR-GEKVAVKVFFTT-------EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLIT 114 (337)
T ss_dssp EEEEEETTEEEEEEEET-TEEEEEEEEEGG-------GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEEE
T ss_pred eEeecCCCeEEEEEEEC-CceEEEEEEecc-------ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEEE
Confidence 78999999999999985 889999998432 123455666666654 99999999999987621 2689999
Q ss_pred EecCCCChhhhhhcC
Q 012224 440 DYASNGTLYEHLHCK 454 (468)
Q Consensus 440 ey~~~GsL~~~L~~~ 454 (468)
||+++|+|.++++..
T Consensus 115 e~~~~g~L~~~l~~~ 129 (337)
T 3mdy_A 115 DYHENGSLYDYLKST 129 (337)
T ss_dssp CCCTTCBHHHHHHHC
T ss_pred eccCCCcHHHHhhcc
Confidence 999999999999754
No 331
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=98.92 E-value=1.7e-09 Score=104.20 Aligned_cols=85 Identities=18% Similarity=0.234 Sum_probs=65.0
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcC------------
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRES------------ 430 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~------------ 430 (468)
+.||+|+||.||+|... +|+.||||++.... ....+.+.+|++++.+++|+||+++++++...
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~ 92 (320)
T 2i6l_A 17 KPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTD----PQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLT 92 (320)
T ss_dssp EECC-----CEEEEEETTTTEEEEEEEEECCS----HHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----CC
T ss_pred EEeccCCCeEEEEEEECCCCeEEEEEEEecCC----hHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccccc
Confidence 67999999999999987 58999999985432 23456899999999999999999999988432
Q ss_pred CCCcEEEEEEecCCCChhhhhhc
Q 012224 431 SPFTRMLVFDYASNGTLYEHLHC 453 (468)
Q Consensus 431 ~~~~~~lv~ey~~~GsL~~~L~~ 453 (468)
+....++|+||++ |+|.+++..
T Consensus 93 ~~~~~~lv~e~~~-~~L~~~~~~ 114 (320)
T 2i6l_A 93 ELNSVYIVQEYME-TDLANVLEQ 114 (320)
T ss_dssp SCSEEEEEEECCS-EEHHHHHTT
T ss_pred ccCceeEEeeccC-CCHHHHhhc
Confidence 1126799999998 699999865
No 332
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=98.92 E-value=8.8e-10 Score=104.28 Aligned_cols=83 Identities=24% Similarity=0.327 Sum_probs=69.1
Q ss_pred hHhccCCceEEEEEEECCCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEecC
Q 012224 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~~ 443 (468)
+.||+|+||.||++... |+.||||.+.... ..+.|.+|++++.+++|+||+++++++.+.. ...++|+||++
T Consensus 27 ~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~------~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~~lv~e~~~ 98 (278)
T 1byg_A 27 QTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA------TAQAFLAEASVMTQLRHSNLVQLLGVIVEEK-GGLYIVTEYMA 98 (278)
T ss_dssp EEEEECSSCEEEEEEET-TEEEEEEECCCCC--------HHHHHTHHHHTTCCCTTBCCEEEEECCC---CCEEEECCCT
T ss_pred eEEecCCCceEEEEEEc-CCEEEEEEecchh------HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC-CceEEEEecCC
Confidence 68999999999999884 7889999984321 3467999999999999999999999986543 15799999999
Q ss_pred CCChhhhhhcC
Q 012224 444 NGTLYEHLHCK 454 (468)
Q Consensus 444 ~GsL~~~L~~~ 454 (468)
+|+|.+++...
T Consensus 99 ~~~L~~~l~~~ 109 (278)
T 1byg_A 99 KGSLVDYLRSR 109 (278)
T ss_dssp TEEHHHHHHHH
T ss_pred CCCHHHHHHhc
Confidence 99999999754
No 333
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=98.92 E-value=2e-10 Score=112.04 Aligned_cols=87 Identities=13% Similarity=0.082 Sum_probs=66.8
Q ss_pred hHhccCCceEEEEEEECCCCeEEEEEEeecccc----cchhhHHHHHHHHHHHhcCC---------CCCccceeeEEE--
Q 012224 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEH----WTGYLELYFQREVADLARIN---------HENTGKLLGYCR-- 428 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~~g~~vavK~l~~~~~~----~~~~~~~~f~~e~~~l~~l~---------H~nlv~l~g~~~-- 428 (468)
+.||+|+||.||+|+. +|+.||||++...... ......+.+.+|++++++++ |+|+|++.+.+.
T Consensus 26 ~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~~~~~~ 104 (336)
T 2vuw_A 26 EKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVHCVQ 104 (336)
T ss_dssp EEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEEEEEEE
T ss_pred eeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhcceeEec
Confidence 7899999999999988 6899999999654321 11223467889999998886 888888877643
Q ss_pred ---------------c-------------CCCCcEEEEEEecCCCChhhhhhc
Q 012224 429 ---------------E-------------SSPFTRMLVFDYASNGTLYEHLHC 453 (468)
Q Consensus 429 ---------------~-------------~~~~~~~lv~ey~~~GsL~~~L~~ 453 (468)
+ .. ..++||||+++|++.+.+.+
T Consensus 105 ~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~--~~~lv~E~~~~g~ll~~~~~ 155 (336)
T 2vuw_A 105 GSYPPLLLKAWDHYNSTKGSANDRPDFFKDD--QLFIVLEFEFGGIDLEQMRT 155 (336)
T ss_dssp SSCCHHHHHHHHHHHHHTCCSSCCSCCCCTT--CEEEEEEEECCCEETGGGTT
T ss_pred CCCcHHHHHHHHHHhhhccccccCccccccC--eEEEEEEecCCCccHHHHHh
Confidence 1 23 78999999999987777744
No 334
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.91 E-value=3e-09 Score=103.47 Aligned_cols=38 Identities=18% Similarity=0.193 Sum_probs=28.4
Q ss_pred CCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCC
Q 012224 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLT 131 (468)
Q Consensus 93 l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~ 131 (468)
+++|+.|+|++ .++..-+..|.+|++|+.|++++|.+.
T Consensus 100 ~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~ 137 (329)
T 3sb4_A 100 KQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAP 137 (329)
T ss_dssp CTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCC
T ss_pred cCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCcc
Confidence 78888888887 777555566888888888888888764
No 335
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=98.91 E-value=2.4e-09 Score=106.79 Aligned_cols=87 Identities=20% Similarity=0.201 Sum_probs=73.7
Q ss_pred hHhccCCceEEEEEEECCCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCC--CCCccceeeEEEcCCCCcEEEEEEe
Q 012224 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN--HENTGKLLGYCRESSPFTRMLVFDY 441 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~--H~nlv~l~g~~~~~~~~~~~lv~ey 441 (468)
+.||+|+||.||++...+|+.||||++..... .....+.|.+|++++.+++ |+|||++++++...+ ..++|||
T Consensus 62 ~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~--~~~lv~E- 136 (390)
T 2zmd_A 62 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA--DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ--YIYMVME- 136 (390)
T ss_dssp EEEECCSSEEEEEEECTTCCEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--EEEEEEE-
T ss_pred EEEccCCCeEEEEEEcCCCCEEEEEEEecccc--cHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCC--EEEEEEe-
Confidence 68999999999999988899999999864332 2334578999999999996 599999999999877 7999999
Q ss_pred cCCCChhhhhhcCC
Q 012224 442 ASNGTLYEHLHCKS 455 (468)
Q Consensus 442 ~~~GsL~~~L~~~~ 455 (468)
+.+|+|.+++....
T Consensus 137 ~~~~~L~~~l~~~~ 150 (390)
T 2zmd_A 137 CGNIDLNSWLKKKK 150 (390)
T ss_dssp CCSEEHHHHHHHCS
T ss_pred cCCCCHHHHHHhcC
Confidence 57889999997653
No 336
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=98.91 E-value=1.7e-09 Score=108.42 Aligned_cols=82 Identities=23% Similarity=0.269 Sum_probs=62.5
Q ss_pred hHhccCCceEEEEEEEC---CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEE
Q 012224 364 NIIGSSPDSLVYKGTMK---GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~---~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~e 440 (468)
++||+|+||.||+|... ++..||||++.... ..+.+.+|++++.+++|+|||++++++........++|||
T Consensus 27 ~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~------~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e 100 (405)
T 3rgf_A 27 CKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG------ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFD 100 (405)
T ss_dssp CCCC-----EEEEEEESSSSCCCCEEEEECSSSS------CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEE
T ss_pred cEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC------CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEe
Confidence 57999999999999975 57889999984322 1246889999999999999999999996543337899999
Q ss_pred ecCCCChhhhhh
Q 012224 441 YASNGTLYEHLH 452 (468)
Q Consensus 441 y~~~GsL~~~L~ 452 (468)
|++ |+|.+++.
T Consensus 101 ~~~-~~l~~~~~ 111 (405)
T 3rgf_A 101 YAE-HDLWHIIK 111 (405)
T ss_dssp CCS-EEHHHHHH
T ss_pred CCC-CCHHHHHH
Confidence 997 58888875
No 337
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=98.91 E-value=2.5e-09 Score=106.48 Aligned_cols=88 Identities=24% Similarity=0.280 Sum_probs=64.6
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCC-CCCccceeeEEEcCCCCcEEEEEEe
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFTRMLVFDY 441 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~-H~nlv~l~g~~~~~~~~~~~lv~ey 441 (468)
+.||+|+||.||+|... +|+.||||++..... .....+.+.+|+.++.+++ |+|||++++++...+....++||||
T Consensus 15 ~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~--~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv~e~ 92 (388)
T 3oz6_A 15 KKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQ--NSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDY 92 (388)
T ss_dssp EC-------CEEEEEETTTCCEEEEEEECC--C--CHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEEEEC
T ss_pred EEeeeCCCeEEEEEEECCCCCEEEEEEeccccc--ChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEEEecc
Confidence 78999999999999875 799999999843211 2234567889999999997 9999999999976543368999999
Q ss_pred cCCCChhhhhhcC
Q 012224 442 ASNGTLYEHLHCK 454 (468)
Q Consensus 442 ~~~GsL~~~L~~~ 454 (468)
|+ |+|.++++..
T Consensus 93 ~~-~~L~~~~~~~ 104 (388)
T 3oz6_A 93 ME-TDLHAVIRAN 104 (388)
T ss_dssp CS-EEHHHHHHHT
T ss_pred cC-cCHHHHHHcC
Confidence 98 6999998754
No 338
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=98.90 E-value=1.1e-09 Score=107.31 Aligned_cols=93 Identities=24% Similarity=0.330 Sum_probs=72.6
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCC------CCcEE
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS------PFTRM 436 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~------~~~~~ 436 (468)
+.||+|+||.||+|... +|+.||||++...... ......+.+|++++.+++|+||++++++|.... ....+
T Consensus 23 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~ 100 (351)
T 3mi9_A 23 AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEK--EGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIY 100 (351)
T ss_dssp EECSSCSTTSEEEEEETTTCCEEEEEECCCSSCS--SSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------CEEE
T ss_pred EEEecCCCcEEEEEEECCCCCEEEEEEEeccccc--ccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCCceEE
Confidence 68999999999999985 7999999998543321 122457889999999999999999999997642 12578
Q ss_pred EEEEecCCCChhhhhhcCCCCcc
Q 012224 437 LVFDYASNGTLYEHLHCKSSSLY 459 (468)
Q Consensus 437 lv~ey~~~GsL~~~L~~~~~~~~ 459 (468)
+||||+++ +|.+.+......++
T Consensus 101 lv~e~~~~-~l~~~l~~~~~~~~ 122 (351)
T 3mi9_A 101 LVFDFCEH-DLAGLLSNVLVKFT 122 (351)
T ss_dssp EEEECCSE-EHHHHHHCTTSCCC
T ss_pred EEEeccCC-CHHHHHhhccCCCC
Confidence 99999984 88888876544443
No 339
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=98.90 E-value=1.4e-09 Score=108.94 Aligned_cols=83 Identities=14% Similarity=0.140 Sum_probs=66.4
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhc-CCCCCccceeeEEEc--CCCCcEEEEE
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLAR-INHENTGKLLGYCRE--SSPFTRMLVF 439 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~-l~H~nlv~l~g~~~~--~~~~~~~lv~ 439 (468)
++||+|+||.||++... +|+.||||++.. ...+.+|++++.+ .+|+||+++++++.. .+....++||
T Consensus 68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~---------~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~ 138 (400)
T 1nxk_A 68 QVLGLGINGKVLQIFNKRTQEKFALKMLQD---------CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVM 138 (400)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEC---------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred ceeeeccCeEEEEEEECCCCCEEEEEEeCc---------chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEE
Confidence 47999999999999876 789999999842 1356778888754 589999999998864 1112589999
Q ss_pred EecCCCChhhhhhcCC
Q 012224 440 DYASNGTLYEHLHCKS 455 (468)
Q Consensus 440 ey~~~GsL~~~L~~~~ 455 (468)
|||++|+|.++|+...
T Consensus 139 E~~~gg~L~~~l~~~~ 154 (400)
T 1nxk_A 139 ECLDGGELFSRIQDRG 154 (400)
T ss_dssp ECCCSEEHHHHHHCC-
T ss_pred EeCCCCcHHHHHHHhC
Confidence 9999999999998653
No 340
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=98.90 E-value=3e-09 Score=103.67 Aligned_cols=83 Identities=25% Similarity=0.320 Sum_probs=69.6
Q ss_pred hHhccCCceEEEEEEECCCCeEEEEEEeecccccchhhHHHHHHHHHHHhc--CCCCCccceeeEEEcCCC--CcEEEEE
Q 012224 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLAR--INHENTGKLLGYCRESSP--FTRMLVF 439 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~--l~H~nlv~l~g~~~~~~~--~~~~lv~ 439 (468)
+.||+|+||.||+|+. +|+.||||++... ..+.+.+|.+++.. ++|+||+++++++..... ...++|+
T Consensus 48 ~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~-------~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~ 119 (342)
T 1b6c_B 48 ESIGKGRFGEVWRGKW-RGEEVAVKIFSSR-------EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 119 (342)
T ss_dssp EEEEEETTEEEEEEEE-TTEEEEEEEECGG-------GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEEE
T ss_pred eeecCCCCcEEEEEEE-cCccEEEEEeCch-------hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEEE
Confidence 7899999999999998 5889999998421 24568888888887 799999999999987532 1579999
Q ss_pred EecCCCChhhhhhcC
Q 012224 440 DYASNGTLYEHLHCK 454 (468)
Q Consensus 440 ey~~~GsL~~~L~~~ 454 (468)
||+++|+|.++++..
T Consensus 120 e~~~~g~L~~~l~~~ 134 (342)
T 1b6c_B 120 DYHEHGSLFDYLNRY 134 (342)
T ss_dssp CCCTTCBHHHHHHHC
T ss_pred eecCCCcHHHHHhcc
Confidence 999999999999754
No 341
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=98.89 E-value=5.7e-10 Score=119.56 Aligned_cols=87 Identities=13% Similarity=0.171 Sum_probs=68.1
Q ss_pred hHhccCCceEEEEEEEC--CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCC---cEEEE
Q 012224 364 NIIGSSPDSLVYKGTMK--GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPF---TRMLV 438 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~--~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~---~~~lv 438 (468)
+.||+|+||.||+|... +|+.||||++.... .....+.|.+|++++.+++|+|||+++++|...+.. ..++|
T Consensus 86 ~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~~lv 162 (681)
T 2pzi_A 86 GCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSG---DAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIV 162 (681)
T ss_dssp EEEEEETTEEEEEEEEGGGTTEEEEEEESCSSC---CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEEEEE
T ss_pred EEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccC---CHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCceeEEE
Confidence 67999999999999875 68899999884321 123456789999999999999999999999875510 16999
Q ss_pred EEecCCCChhhhhhc
Q 012224 439 FDYASNGTLYEHLHC 453 (468)
Q Consensus 439 ~ey~~~GsL~~~L~~ 453 (468)
|||+++|+|.+++..
T Consensus 163 ~E~~~g~~L~~~~~~ 177 (681)
T 2pzi_A 163 MEYVGGQSLKRSKGQ 177 (681)
T ss_dssp EECCCCEECC----C
T ss_pred EEeCCCCcHHHHHhC
Confidence 999999999988754
No 342
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=98.89 E-value=2.8e-09 Score=104.00 Aligned_cols=84 Identities=11% Similarity=0.056 Sum_probs=68.0
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHH-HhcCCCCCccceeeEEEcCCCCcEEEEEEe
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVAD-LARINHENTGKLLGYCRESSPFTRMLVFDY 441 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~-l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey 441 (468)
+.||+|+||.||+|... +|+.||||++...... ....++..|... +..++|+||+++++++...+ ..++||||
T Consensus 57 ~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~--~~~lv~e~ 131 (340)
T 3an0_A 57 MELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNS---QEQKRLLMDLDISMRTVDCPFTVTFYGALFREG--DVWICMEL 131 (340)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECSCCCC---HHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSS--CEEEEECC
T ss_pred eEecccCCEEEEEEEEcCCCCEEEEEEeccccCc---HHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCC--cEEEEHHH
Confidence 57999999999999875 7899999998543221 234556666665 78889999999999998876 79999999
Q ss_pred cCCCChhhhhhc
Q 012224 442 ASNGTLYEHLHC 453 (468)
Q Consensus 442 ~~~GsL~~~L~~ 453 (468)
+++ +|.+++..
T Consensus 132 ~~~-~L~~~l~~ 142 (340)
T 3an0_A 132 MDT-SLDKFYKQ 142 (340)
T ss_dssp CSE-EHHHHHHH
T ss_pred hhC-cHHHHHHH
Confidence 985 99998864
No 343
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=98.89 E-value=2.3e-09 Score=101.92 Aligned_cols=85 Identities=11% Similarity=0.034 Sum_probs=66.1
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEec
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~ 442 (468)
+.||+|+||.||++... +|+.||||++...... ....+.+.++...++.++|+||+++++++.+.+ ..++||||+
T Consensus 13 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~--~~~lv~e~~ 88 (290)
T 3fme_A 13 MELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNS--QEQKRLLMDLDISMRTVDCPFTVTFYGALFREG--DVWICMELM 88 (290)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEC---CH--HHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--SEEEEEECC
T ss_pred HhcCCCCCeEEEEEEecCCCeEEEEEEeecccCc--HHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccC--CEEEEEehh
Confidence 67999999999999875 7899999998543211 122334455556688899999999999999876 799999999
Q ss_pred CCCChhhhhhc
Q 012224 443 SNGTLYEHLHC 453 (468)
Q Consensus 443 ~~GsL~~~L~~ 453 (468)
+ |+|.++++.
T Consensus 89 ~-~~l~~~l~~ 98 (290)
T 3fme_A 89 D-TSLDKFYKQ 98 (290)
T ss_dssp S-EEHHHHHHH
T ss_pred c-cchHHHHHH
Confidence 8 589888763
No 344
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=98.89 E-value=1.6e-09 Score=103.31 Aligned_cols=87 Identities=14% Similarity=0.173 Sum_probs=72.8
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcC-CCCCccceeeEEEcCCCCcEEEEEEe
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDY 441 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l-~H~nlv~l~g~~~~~~~~~~~lv~ey 441 (468)
+.||+|+||.||+|... +|+.||||++..... .+.+.+|++++.++ +|+|++++++++.... ..++|+||
T Consensus 16 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~--~~~lv~e~ 87 (298)
T 1csn_A 16 RRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD------APQLRDEYRTYKLLAGCTGIPNVYYFGQEGL--HNVLVIDL 87 (298)
T ss_dssp EEEEECSSCEEEEEEETTTTEEEEEEEEECCTT------SCCHHHHHHHHHHTTTCTTCCCEEEEEEETT--EEEEEEEC
T ss_pred EEEeecCCEEEEEEEECCCCcEEEEEEeccCCc------cHHHHHHHHHHHHHhcCCCCCeEEeecCCCc--eeEEEEEe
Confidence 67999999999999864 789999998853321 23588899999999 8999999999998876 88999999
Q ss_pred cCCCChhhhhhcCCCCcc
Q 012224 442 ASNGTLYEHLHCKSSSLY 459 (468)
Q Consensus 442 ~~~GsL~~~L~~~~~~~~ 459 (468)
+ +|+|.++++..+..++
T Consensus 88 ~-~~~L~~~l~~~~~~~~ 104 (298)
T 1csn_A 88 L-GPSLEDLLDLCGRKFS 104 (298)
T ss_dssp C-CCBHHHHHHHTTTCCC
T ss_pred c-CCCHHHHHHHhccCCC
Confidence 9 9999999986554443
No 345
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=98.88 E-value=2.3e-09 Score=102.69 Aligned_cols=81 Identities=14% Similarity=0.144 Sum_probs=67.8
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHH-hcCCCCCccceeeEEEc----CCCCcEEE
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADL-ARINHENTGKLLGYCRE----SSPFTRML 437 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l-~~l~H~nlv~l~g~~~~----~~~~~~~l 437 (468)
++||+|+||.||++... +|+.||||++.. ...+.+|++++ ...+|+||+++++++.. .. ..++
T Consensus 24 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---------~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~--~~~l 92 (299)
T 3m2w_A 24 QVLGLGINGKVLQIFNKRTQEKFALKMLQD---------CPKARREVELHWRASQCPHIVRIVDVYENLYAGRK--CLLI 92 (299)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEC---------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEE--EEEE
T ss_pred cccccCCCeEEEEEEEcCCCcEEEEEEecc---------cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCc--eEEE
Confidence 56999999999999875 789999999832 13567888888 55699999999999875 33 6899
Q ss_pred EEEecCCCChhhhhhcCC
Q 012224 438 VFDYASNGTLYEHLHCKS 455 (468)
Q Consensus 438 v~ey~~~GsL~~~L~~~~ 455 (468)
||||+++|+|.+++....
T Consensus 93 v~e~~~~~~L~~~l~~~~ 110 (299)
T 3m2w_A 93 VMECLDGGELFSRIQDRG 110 (299)
T ss_dssp EECCCCSCBHHHHHHHCT
T ss_pred EEeecCCCcHHHHHHhcc
Confidence 999999999999998654
No 346
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=98.88 E-value=1.2e-09 Score=108.68 Aligned_cols=80 Identities=20% Similarity=0.267 Sum_probs=63.3
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCC-----------
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS----------- 431 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~----------- 431 (468)
+.||+|+||.||+|... +|+.||||++..... .+.+|++++++++|+|||++++++....
T Consensus 13 ~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~--------~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~ 84 (383)
T 3eb0_A 13 KTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR--------YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPD 84 (383)
T ss_dssp EEEECC-CEEEEEEEETTTCCEEEEEEEECCTT--------SCCHHHHHHTTCCCTTBCCEEEEEEEC------------
T ss_pred EEEEeccCEEEEEEEECCCCCEEEEEEEecCcc--------hHHHHHHHHHHcCCCCccchhheeeecCccccccccccc
Confidence 78999999999999875 899999999853321 2346999999999999999999985432
Q ss_pred -------------------------CCcEEEEEEecCCCChhhhhh
Q 012224 432 -------------------------PFTRMLVFDYASNGTLYEHLH 452 (468)
Q Consensus 432 -------------------------~~~~~lv~ey~~~GsL~~~L~ 452 (468)
....++||||++ |+|.+.++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~ 129 (383)
T 3eb0_A 85 DHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLK 129 (383)
T ss_dssp -------------------------CCEEEEEECCCS-EEHHHHHH
T ss_pred ccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHH
Confidence 113779999998 58888876
No 347
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=98.88 E-value=2.1e-09 Score=109.46 Aligned_cols=88 Identities=19% Similarity=0.145 Sum_probs=62.4
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCC---CCcEEEEE
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS---PFTRMLVF 439 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~---~~~~~lv~ 439 (468)
+.||+|+||.||+|... +|+.||||++..... .....+.+.+|++++.+++|+|||++++++.... ....++|+
T Consensus 59 ~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~ 136 (458)
T 3rp9_A 59 HLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFE--DLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVL 136 (458)
T ss_dssp CC-------CEEEEEECC--CEEEEEEECSTTS--SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEE
T ss_pred eEeeecCCeEEEEEEECCCCcEEEEEEechhhc--CHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEEEEE
Confidence 68999999999999876 789999999843221 2234568999999999999999999999985432 12589999
Q ss_pred EecCCCChhhhhhcC
Q 012224 440 DYASNGTLYEHLHCK 454 (468)
Q Consensus 440 ey~~~GsL~~~L~~~ 454 (468)
||+. |+|.++++..
T Consensus 137 e~~~-~~L~~~~~~~ 150 (458)
T 3rp9_A 137 EIAD-SDFKKLFRTP 150 (458)
T ss_dssp CCCS-EEHHHHHHSS
T ss_pred eccc-cchhhhcccC
Confidence 9985 7999998754
No 348
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=98.88 E-value=2.7e-09 Score=107.92 Aligned_cols=88 Identities=17% Similarity=0.123 Sum_probs=72.0
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCC---CcEEEEE
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP---FTRMLVF 439 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~---~~~~lv~ 439 (468)
+.||+|+||.||+|... +|+.||||++..... .....+.+.+|++++.+++|+||+++++++..... ...++||
T Consensus 32 ~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~ 109 (432)
T 3n9x_A 32 HLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFE--DLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVL 109 (432)
T ss_dssp EEEEEETTEEEEEEEETTTTEEEEEEEECSTTT--SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEE
T ss_pred EEEeecCCEEEEEEEECCCCcEEEEEEeCchhc--ChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEEEEE
Confidence 68999999999999876 688999999853221 22345689999999999999999999999976521 2689999
Q ss_pred EecCCCChhhhhhcC
Q 012224 440 DYASNGTLYEHLHCK 454 (468)
Q Consensus 440 ey~~~GsL~~~L~~~ 454 (468)
||++ |+|.++++..
T Consensus 110 e~~~-~~L~~~~~~~ 123 (432)
T 3n9x_A 110 EIAD-SDLKKLFKTP 123 (432)
T ss_dssp ECCS-EEHHHHHHSS
T ss_pred ecCC-cCHHHHHhcc
Confidence 9997 6999999764
No 349
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=98.88 E-value=2e-09 Score=104.55 Aligned_cols=85 Identities=19% Similarity=0.215 Sum_probs=68.9
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCC-CCCccceeeEEEcC------CCCcE
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRES------SPFTR 435 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~-H~nlv~l~g~~~~~------~~~~~ 435 (468)
+.||+|+||.||+|... +|+.||||++.... ....+.+.+|+.++.+++ |+||+++++++... .....
T Consensus 34 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~ 109 (337)
T 3ll6_A 34 RVLAEGGFAFVYEAQDVGSGREYALKRLLSNE----EEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEF 109 (337)
T ss_dssp EEEECCSSEEEEEEEETTTCCEEEEEEEEESS----HHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEE
T ss_pred EEEccCCceEEEEEEECCCCcEEEEEEecCCc----hHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCceE
Confidence 68999999999999975 78999999984432 234567899999999996 99999999999521 11147
Q ss_pred EEEEEecCCCChhhhhhc
Q 012224 436 MLVFDYASNGTLYEHLHC 453 (468)
Q Consensus 436 ~lv~ey~~~GsL~~~L~~ 453 (468)
++|+||++ |+|.+++..
T Consensus 110 ~lv~e~~~-g~L~~~l~~ 126 (337)
T 3ll6_A 110 LLLTELCK-GQLVEFLKK 126 (337)
T ss_dssp EEEEECCS-EEHHHHHHH
T ss_pred EEEEEecC-CCHHHHHHH
Confidence 89999996 799999864
No 350
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=98.87 E-value=2e-09 Score=106.39 Aligned_cols=88 Identities=19% Similarity=0.187 Sum_probs=65.5
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCC----CcEEEE
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP----FTRMLV 438 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~----~~~~lv 438 (468)
+.||+|+||.||+|... +|+.||||++..... .....+.+.+|++++.+++|+||+++++++..... ...++|
T Consensus 31 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv 108 (367)
T 1cm8_A 31 QPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQ--SELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLV 108 (367)
T ss_dssp EEC------CEEEEEETTTCCEEEEEECSSTTS--SHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEEE
T ss_pred EEeeecCCeEEEEEEECCCCCEEEEEEeCcccc--CHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceEEEE
Confidence 67999999999999875 799999999843221 22345678999999999999999999999976431 145999
Q ss_pred EEecCCCChhhhhhcC
Q 012224 439 FDYASNGTLYEHLHCK 454 (468)
Q Consensus 439 ~ey~~~GsL~~~L~~~ 454 (468)
|||+ +++|.++++..
T Consensus 109 ~e~~-~~~L~~~~~~~ 123 (367)
T 1cm8_A 109 MPFM-GTDLGKLMKHE 123 (367)
T ss_dssp EECC-SEEHHHHHHHC
T ss_pred EecC-CCCHHHHHhcC
Confidence 9999 78999998753
No 351
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=98.87 E-value=1.6e-09 Score=104.19 Aligned_cols=91 Identities=29% Similarity=0.300 Sum_probs=68.5
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccc-cchhhHHHHHHHHHHHhcC---CCCCccceeeEEEcCCCC---cE
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEH-WTGYLELYFQREVADLARI---NHENTGKLLGYCRESSPF---TR 435 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~-~~~~~~~~f~~e~~~l~~l---~H~nlv~l~g~~~~~~~~---~~ 435 (468)
+.||+|+||.||+|... +|+.||||++...... ........+.+|++++.++ +|+||++++++|...... ..
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~~~~~~ 94 (308)
T 3g33_A 15 AEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKV 94 (308)
T ss_dssp EEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSSSEEEE
T ss_pred EEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCCCceeE
Confidence 78999999999999874 7899999998644311 1111234566777777666 499999999999765421 36
Q ss_pred EEEEEecCCCChhhhhhcCC
Q 012224 436 MLVFDYASNGTLYEHLHCKS 455 (468)
Q Consensus 436 ~lv~ey~~~GsL~~~L~~~~ 455 (468)
++||||++ |+|.+++....
T Consensus 95 ~lv~e~~~-~~L~~~~~~~~ 113 (308)
T 3g33_A 95 TLVFEHVD-QDLRTYLDKAP 113 (308)
T ss_dssp EEEEECCC-CBHHHHHHTCC
T ss_pred EEEehhhh-cCHHHHHhhcc
Confidence 89999997 69999998654
No 352
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=98.87 E-value=1.8e-09 Score=115.26 Aligned_cols=88 Identities=17% Similarity=0.035 Sum_probs=73.1
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcC-CCCCccceeeEEEcCCCCcEEEEEEe
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDY 441 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l-~H~nlv~l~g~~~~~~~~~~~lv~ey 441 (468)
++||+|+||.||+|... +++.||||++..... ......+.+..|.+++..+ +|++|+++++++.+.+ ..++||||
T Consensus 347 ~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~-~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~--~~~lV~E~ 423 (674)
T 3pfq_A 347 MVLGKGSFGKVMLSERKGTDELYAVKILKKDVV-IQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMD--RLYFVMEY 423 (674)
T ss_dssp EESSBTTTBCEEEEEESSSCCEEEEEEEEHHHH-HHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSS--EEEEEEEC
T ss_pred EEEccCCCEEEEEEEECCCCcEEEEEEEecccc-ccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCC--EEEEEEeC
Confidence 78999999999999886 688999999853211 1112345788899999988 7999999999998776 79999999
Q ss_pred cCCCChhhhhhcC
Q 012224 442 ASNGTLYEHLHCK 454 (468)
Q Consensus 442 ~~~GsL~~~L~~~ 454 (468)
+++|+|.++|+..
T Consensus 424 ~~gg~L~~~l~~~ 436 (674)
T 3pfq_A 424 VNGGDLMYHIQQV 436 (674)
T ss_dssp CCSCBHHHHHHHH
T ss_pred cCCCcHHHHHHhc
Confidence 9999999999754
No 353
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=98.86 E-value=2.6e-10 Score=110.11 Aligned_cols=90 Identities=24% Similarity=0.356 Sum_probs=73.2
Q ss_pred hHhccCCceEEEEEEECCCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEecC
Q 012224 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYAS 443 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~~ 443 (468)
+.||+|+||.||+|...+ .+|+|++...... ....+.|.+|++++.+++|+||+++++++.... ..++|+||++
T Consensus 39 ~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~iv~e~~~ 112 (319)
T 2y4i_B 39 ELIGKGRFGQVYHGRWHG--EVAIRLIDIERDN--EDQLKAFKREVMAYRQTRHENVVLFMGACMSPP--HLAIITSLCK 112 (319)
T ss_dssp CBCCCSSSSEEEEEEESS--SEEEEECCCCSCC--CCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSS--CEEEECBCCC
T ss_pred eEeccCCceEEEEEEEcC--eEEEEEeecCCCC--HHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCC--ceEEEeeccc
Confidence 679999999999998853 4899998543211 112346788999999999999999999999876 7999999999
Q ss_pred CCChhhhhhcCCCCcc
Q 012224 444 NGTLYEHLHCKSSSLY 459 (468)
Q Consensus 444 ~GsL~~~L~~~~~~~~ 459 (468)
+|+|.++++.....+.
T Consensus 113 ~~~L~~~l~~~~~~~~ 128 (319)
T 2y4i_B 113 GRTLYSVVRDAKIVLD 128 (319)
T ss_dssp SEEHHHHTTSSCCCCC
T ss_pred CCcHHHHHHhcCCCCC
Confidence 9999999987654443
No 354
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=98.86 E-value=1.1e-09 Score=108.58 Aligned_cols=88 Identities=14% Similarity=0.174 Sum_probs=67.0
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHH---HHHhcCCCCCcccee-------eEEEcCCC
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREV---ADLARINHENTGKLL-------GYCRESSP 432 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~---~~l~~l~H~nlv~l~-------g~~~~~~~ 432 (468)
+.||+|+||.||+|... +|+.||||++...... .....+.|.+|+ +.+++++|||||+++ +++...+.
T Consensus 79 ~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 157 (377)
T 3byv_A 79 TVLGQEDPYAYLEATDQETGESFEVHVPYFTERP-PSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQK 157 (377)
T ss_dssp EEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-C-CTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTTS
T ss_pred ceeecCCCEEEEEEEECCCCcEEEEEEEeecccc-chHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccCC
Confidence 68999999999999974 7999999999643211 223457899999 566677899999998 66554420
Q ss_pred ----------C-----cEEEEEEecCCCChhhhhhc
Q 012224 433 ----------F-----TRMLVFDYASNGTLYEHLHC 453 (468)
Q Consensus 433 ----------~-----~~~lv~ey~~~GsL~~~L~~ 453 (468)
. ..++||||+ +|+|.++++.
T Consensus 158 ~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~ 192 (377)
T 3byv_A 158 KKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEV 192 (377)
T ss_dssp CSEEEC------CEEESEEEEEECC-SEEHHHHHHH
T ss_pred ccccccccCCCceEEEEEEEEEecc-CCCHHHHHHh
Confidence 0 278999999 6899999975
No 355
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.84 E-value=1.3e-10 Score=122.25 Aligned_cols=155 Identities=12% Similarity=0.036 Sum_probs=110.8
Q ss_pred CCEEEEEec-----------CCCCccc-CCccccCCCCCCEEEccCccccccCChhhcC-CCCCCEEEcc----CCCCCC
Q 012224 70 DRVLKINIS-----------GSSLKGF-LAPELGLLTYLQELILHGNNLIGIIPKELGL-LKRLKILDLG----TNQLTG 132 (468)
Q Consensus 70 ~~v~~L~L~-----------~n~l~g~-~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~-l~~L~~L~Ls----~N~l~g 132 (468)
.+++.|+|+ .+.+++. ++.....+++|++|+++.|.+++..+..+.. +++|+.|+|+ .|++++
T Consensus 342 ~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~ 421 (592)
T 3ogk_B 342 KQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITD 421 (592)
T ss_dssp TTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSS
T ss_pred CCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccC
Confidence 579999999 3666654 2233456899999999999999888888776 9999999996 778886
Q ss_pred C-----CCcCCCCCcccceeecccc--cCcccCChhccC-CCCCcEEeccCCCCCcc-CCCCCCccccccccccccCCCC
Q 012224 133 P-----IPPEIGNLTGLVKINLQSN--GLTGRLPAELGN-LISLEELHLDRNRLQGA-VPAGSNSGYTANIHGMYASSAN 203 (468)
Q Consensus 133 ~-----iP~~~~~l~~L~~L~Ls~N--~l~g~~p~~l~~-l~~L~~L~ls~N~l~g~-ip~~~~~~~~~~l~~~~ls~n~ 203 (468)
. ++..+..+++|+.|+|++| .+++..+..++. +++|++|++++|++++. ++.... ...++..+++++|.
T Consensus 422 ~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~--~~~~L~~L~l~~n~ 499 (592)
T 3ogk_B 422 LPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSR--GCPNLQKLEMRGCC 499 (592)
T ss_dssp CCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHT--CCTTCCEEEEESCC
T ss_pred chHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHh--cCcccCeeeccCCC
Confidence 3 4444677899999999753 477666666654 88999999999998753 221100 01346667777777
Q ss_pred ccC------ccCCCCCCEEEcccCcCccC
Q 012224 204 LTG------LCHLSQLKVADFSYNFFVGS 226 (468)
Q Consensus 204 l~~------~~~l~~L~~l~ls~N~l~g~ 226 (468)
+++ ...+++|+.|++++|+++..
T Consensus 500 l~~~~~~~~~~~l~~L~~L~ls~n~it~~ 528 (592)
T 3ogk_B 500 FSERAIAAAVTKLPSLRYLWVQGYRASMT 528 (592)
T ss_dssp CBHHHHHHHHHHCSSCCEEEEESCBCCTT
T ss_pred CcHHHHHHHHHhcCccCeeECcCCcCCHH
Confidence 543 12467788888888887765
No 356
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=98.84 E-value=3.8e-09 Score=103.44 Aligned_cols=87 Identities=18% Similarity=0.214 Sum_probs=70.8
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCC---CCcEEEEE
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS---PFTRMLVF 439 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~---~~~~~lv~ 439 (468)
+.||+|+||.||+|... +|+.||||++.... .......+.+|++++.+++|+||+++++++.... ....++|+
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~ 93 (353)
T 2b9h_A 17 SLLGEGAYGVVCSATHKPTGEIVAIKKIEPFD---KPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQ 93 (353)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECCCS---SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEEEE
T ss_pred eEEcCCCCeEEEEEEECCCCcEEEEEeecccc---cchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEEEEE
Confidence 67999999999999986 78999999984322 1234567889999999999999999999987531 12689999
Q ss_pred EecCCCChhhhhhcC
Q 012224 440 DYASNGTLYEHLHCK 454 (468)
Q Consensus 440 ey~~~GsL~~~L~~~ 454 (468)
||++ |+|.+++..+
T Consensus 94 e~~~-~~L~~~~~~~ 107 (353)
T 2b9h_A 94 ELMQ-TDLHRVISTQ 107 (353)
T ss_dssp CCCS-EEHHHHHHHC
T ss_pred eccC-ccHHHHHhhc
Confidence 9998 6999988753
No 357
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=98.84 E-value=3e-09 Score=107.65 Aligned_cols=82 Identities=16% Similarity=0.118 Sum_probs=68.6
Q ss_pred hHhccCCceEEEEEEECCCCeEEEEEEeecccccchhhHHHHHHHHHHHhcC-CCCCccceeeEEEcCCCCcEEEEEEec
Q 012224 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDYA 442 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l-~H~nlv~l~g~~~~~~~~~~~lv~ey~ 442 (468)
++||+|+||+||.+...+|+.||||++... ..+.+.+|++++.++ +|||||++++++.+.. ..++|+||+
T Consensus 21 ~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~-------~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~--~~~lv~E~~ 91 (434)
T 2rio_A 21 KILGYGSSGTVVFQGSFQGRPVAVKRMLID-------FCDIALMEIKLLTESDDHPNVIRYYCSETTDR--FLYIALELC 91 (434)
T ss_dssp EEEEECSTTCEEEEEESSSSEEEEEEEEGG-------GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSS--EEEEEECCC
T ss_pred CeEeeCCCeEEEEEEEECCeEEEEEEEcHH-------HHHHHHHHHHHHHhccCCCCcCeEEEEEecCC--eEEEEEecC
Confidence 679999999998776668999999998432 134678899999886 8999999999998876 899999999
Q ss_pred CCCChhhhhhcCC
Q 012224 443 SNGTLYEHLHCKS 455 (468)
Q Consensus 443 ~~GsL~~~L~~~~ 455 (468)
+ |+|.+++....
T Consensus 92 ~-gsL~~~l~~~~ 103 (434)
T 2rio_A 92 N-LNLQDLVESKN 103 (434)
T ss_dssp S-EEHHHHHHTC-
T ss_pred C-CCHHHHHhccC
Confidence 5 79999998653
No 358
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=98.83 E-value=1.7e-09 Score=106.65 Aligned_cols=97 Identities=10% Similarity=-0.001 Sum_probs=69.3
Q ss_pred hHhccCCceEEEEEEECC------CCeEEEEEEeecccccc-------hhhHHHHHHHHHHHhcCCCCCccceeeEEEcC
Q 012224 364 NIIGSSPDSLVYKGTMKG------GPEIAVISLCIKEEHWT-------GYLELYFQREVADLARINHENTGKLLGYCRES 430 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~~------g~~vavK~l~~~~~~~~-------~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~ 430 (468)
+.||+|+||.||+|.... ++.||||++........ ......+..|+..+.+++|+||+++++++...
T Consensus 41 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~ 120 (364)
T 3op5_A 41 LPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLHD 120 (364)
T ss_dssp EECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEEEEEEE
T ss_pred EEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEeeeeec
Confidence 689999999999998864 47899999854321100 00112455667778889999999999998764
Q ss_pred CC--CcEEEEEEecCCCChhhhhhcCCCCcccc
Q 012224 431 SP--FTRMLVFDYASNGTLYEHLHCKSSSLYII 461 (468)
Q Consensus 431 ~~--~~~~lv~ey~~~GsL~~~L~~~~~~~~~~ 461 (468)
.. ...++||||+ +|+|.++++.....+...
T Consensus 121 ~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~ 152 (364)
T 3op5_A 121 KNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRK 152 (364)
T ss_dssp ETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHH
T ss_pred cCCcceEEEEEeCC-CCCHHHHHHhccCCCCHH
Confidence 21 1479999999 999999998765544433
No 359
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=98.83 E-value=5e-09 Score=102.93 Aligned_cols=93 Identities=19% Similarity=0.214 Sum_probs=59.7
Q ss_pred HHHHHHHhhH--hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcC
Q 012224 354 ELEVACEDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRES 430 (468)
Q Consensus 354 el~~at~~~~--~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~ 430 (468)
+.....++|. +.||+|+||.||+|... +|..||||++...... .+.+.+|++.+.+++|+||+++++++...
T Consensus 17 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~~~l~~l~h~niv~~~~~~~~~ 91 (360)
T 3e3p_A 17 RSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRF-----RNRELQIMQDLAVLHHPNIVQLQSYFYTL 91 (360)
T ss_dssp HHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTC-----CCHHHHHHHHHHHHCCTTBCCEEEEEEEE
T ss_pred hchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccc-----cHHHHHHHHHHHhcCCCCcccHHHhhhcc
Confidence 3444555665 89999999999999986 7899999998543221 23567788889999999999999999654
Q ss_pred CC-----CcEEEEEEecCCCChhhhhh
Q 012224 431 SP-----FTRMLVFDYASNGTLYEHLH 452 (468)
Q Consensus 431 ~~-----~~~~lv~ey~~~GsL~~~L~ 452 (468)
.. ...++||||+++ +|.+.+.
T Consensus 92 ~~~~~~~~~~~lv~e~~~~-~l~~~~~ 117 (360)
T 3e3p_A 92 GERDRRDIYLNVVMEYVPD-TLHRCCR 117 (360)
T ss_dssp CSSCTTCEEEEEEEECCSC-BHHHHHH
T ss_pred ccccccceeEEEEeecccc-cHHHHHH
Confidence 31 016899999986 5555443
No 360
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=98.82 E-value=5.3e-09 Score=103.13 Aligned_cols=87 Identities=21% Similarity=0.180 Sum_probs=70.9
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCC---CCcEEEEE
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS---PFTRMLVF 439 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~---~~~~~lv~ 439 (468)
+.||+|+||.||+|... ++..||||++.... .....+.+.+|++++.+++|+||+++++++.... ....++|+
T Consensus 33 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~iv~ 109 (364)
T 3qyz_A 33 SYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE---HQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQ 109 (364)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECCTT---CHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEEE
T ss_pred EEeecCCCeEEEEEEECCCCeEEEEEEecccc---CcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEEEE
Confidence 68999999999999876 78899999985322 1234567999999999999999999999996542 12579999
Q ss_pred EecCCCChhhhhhcC
Q 012224 440 DYASNGTLYEHLHCK 454 (468)
Q Consensus 440 ey~~~GsL~~~L~~~ 454 (468)
||++ |+|.+++...
T Consensus 110 e~~~-~~L~~~l~~~ 123 (364)
T 3qyz_A 110 DLME-TDLYKLLKTQ 123 (364)
T ss_dssp ECCS-EEHHHHHHHC
T ss_pred cccC-cCHHHHHHhC
Confidence 9998 5999998754
No 361
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=98.82 E-value=4.4e-09 Score=109.34 Aligned_cols=87 Identities=9% Similarity=0.058 Sum_probs=64.1
Q ss_pred hHhccCCceEEEEEEECCCCeEEEEEEeeccccc----chhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEE
Q 012224 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHW----TGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~~g~~vavK~l~~~~~~~----~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ 439 (468)
++||+|+||.||+|.. .+..+++|+...+.... .....+.|.+|++++.+++|+||+++..|+...+ ..++||
T Consensus 342 ~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~--~~~lVm 418 (540)
T 3en9_A 342 HLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLD--NKRIMM 418 (540)
T ss_dssp ------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETT--TTEEEE
T ss_pred CEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCC--ccEEEE
Confidence 6899999999999955 57789999875432111 1112456899999999999999998888777665 679999
Q ss_pred EecCCCChhhhhhc
Q 012224 440 DYASNGTLYEHLHC 453 (468)
Q Consensus 440 ey~~~GsL~~~L~~ 453 (468)
||+++|+|.++++.
T Consensus 419 E~~~ggsL~~~l~~ 432 (540)
T 3en9_A 419 SYINGKLAKDVIED 432 (540)
T ss_dssp ECCCSEEHHHHSTT
T ss_pred ECCCCCCHHHHHHH
Confidence 99999999999875
No 362
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=98.81 E-value=5.6e-09 Score=103.30 Aligned_cols=87 Identities=22% Similarity=0.225 Sum_probs=70.0
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCC----cEEEE
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPF----TRMLV 438 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~----~~~lv 438 (468)
+.||+|+||.||+|... +|+.||||++..... .....+.+.+|++++.+++|+||+++++++...+.. ..++|
T Consensus 48 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv 125 (371)
T 4exu_A 48 THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQ--SEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLV 125 (371)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECSTTS--SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCCEEE
T ss_pred eEEecCCCeEEEEEEECCCCCEEEEEEeccccc--chhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeEEEE
Confidence 67999999999999876 789999999853321 223457889999999999999999999999875511 13999
Q ss_pred EEecCCCChhhhhhc
Q 012224 439 FDYASNGTLYEHLHC 453 (468)
Q Consensus 439 ~ey~~~GsL~~~L~~ 453 (468)
+||++ |+|.+++..
T Consensus 126 ~e~~~-~~l~~~~~~ 139 (371)
T 4exu_A 126 MPFMQ-TDLQKIMGM 139 (371)
T ss_dssp EECCC-EEHHHHTTS
T ss_pred Ecccc-ccHHHHhhc
Confidence 99998 688888743
No 363
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=98.81 E-value=2.6e-09 Score=108.04 Aligned_cols=83 Identities=17% Similarity=0.212 Sum_probs=67.9
Q ss_pred hHhccCCceEEEEEEECCCCeEEEEEEeecccccchhhHHHHHHHHHHHhcC-CCCCccceeeEEEcCCCCcEEEEEEec
Q 012224 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDYA 442 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l-~H~nlv~l~g~~~~~~~~~~~lv~ey~ 442 (468)
++||+|+||+||.....+|+.||||++..... ..+.+|++++.++ +|+|||++++++.+.. ..++||||+
T Consensus 30 ~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~-------~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~--~~~lv~E~~ 100 (432)
T 3p23_A 30 DVLGHGAEGTIVYRGMFDNRDVAVKRILPECF-------SFADREVQLLRESDEHPNVIRYFCTEKDRQ--FQYIAIELC 100 (432)
T ss_dssp EEEEECGGGCEEEEEESSSSEEEEEEECTTTE-------EECHHHHHHHHHSCCCTTBCCEEEEEEETT--EEEEEEECC
T ss_pred CeeecCcCEEEEEEEEeCCeEEEEEEECHHHH-------HHHHHHHHHHHhccCCCCcCeEEEEEecCC--EEEEEEECC
Confidence 68999999996655556889999999843221 1356799999999 8999999999998876 789999999
Q ss_pred CCCChhhhhhcCCC
Q 012224 443 SNGTLYEHLHCKSS 456 (468)
Q Consensus 443 ~~GsL~~~L~~~~~ 456 (468)
+ |+|.+++.....
T Consensus 101 ~-g~L~~~l~~~~~ 113 (432)
T 3p23_A 101 A-ATLQEYVEQKDF 113 (432)
T ss_dssp S-EEHHHHHHSSSC
T ss_pred C-CCHHHHHHhcCC
Confidence 7 699999986654
No 364
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=98.81 E-value=7.8e-10 Score=116.66 Aligned_cols=89 Identities=15% Similarity=0.126 Sum_probs=73.1
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcC----CCCcEEEE
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRES----SPFTRMLV 438 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~----~~~~~~lv 438 (468)
+.||+|+||.||+|... +|..||||++... ......+.|.+|++++.+++|+|||++++++... .....++|
T Consensus 20 ~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~---~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~~LV 96 (676)
T 3qa8_A 20 ERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE---LSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLA 96 (676)
T ss_dssp CCCCBCSSSBCCCCCCTTTTCCEEECCCCSC---CCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSCCCE
T ss_pred EEEeeCCCeEEEEEEECCCCcEEEEEEeccc---CCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeEEEE
Confidence 78999999999999875 7899999987432 1234467899999999999999999999987551 12267899
Q ss_pred EEecCCCChhhhhhcCC
Q 012224 439 FDYASNGTLYEHLHCKS 455 (468)
Q Consensus 439 ~ey~~~GsL~~~L~~~~ 455 (468)
|||+++|+|.+++....
T Consensus 97 mEy~~ggsL~~~L~~~~ 113 (676)
T 3qa8_A 97 MEYCEGGDLRKYLNQFE 113 (676)
T ss_dssp EECCSSCBHHHHHHSSS
T ss_pred EEeCCCCCHHHHHHhcc
Confidence 99999999999998643
No 365
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=98.80 E-value=6.3e-09 Score=106.19 Aligned_cols=87 Identities=18% Similarity=0.128 Sum_probs=68.8
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCC----CCcEEEE
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS----PFTRMLV 438 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~----~~~~~lv 438 (468)
+.||+|+||.||+|... +|+.||||++.... ......+.+.+|++++.+++|+|||++++++.... ....++|
T Consensus 68 ~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~--~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv 145 (464)
T 3ttj_A 68 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF--QNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLV 145 (464)
T ss_dssp EEEEECSSCEEEEEEETTTTEEEEEEEEESGG--GSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEE
T ss_pred EEeecCCCeEEEEEEECCCCCEEEEEEECccc--cChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeEEEE
Confidence 67999999999999875 78999999985432 12234567899999999999999999999996543 1257999
Q ss_pred EEecCCCChhhhhhc
Q 012224 439 FDYASNGTLYEHLHC 453 (468)
Q Consensus 439 ~ey~~~GsL~~~L~~ 453 (468)
||||+++ |.+.+..
T Consensus 146 ~E~~~~~-l~~~~~~ 159 (464)
T 3ttj_A 146 MELMDAN-LCQVIQM 159 (464)
T ss_dssp EECCSEE-HHHHHTS
T ss_pred EeCCCCC-HHHHHhh
Confidence 9999864 6666643
No 366
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=98.80 E-value=9.5e-09 Score=99.59 Aligned_cols=83 Identities=12% Similarity=0.073 Sum_probs=67.2
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHH-HHhcCCCCCccceeeEEEcCCCCcEEEEEEe
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVA-DLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~-~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey 441 (468)
+.||+|+||.||+|... +|+.||||++..... .....++..|+. +++.++|+||+++++++...+ ..++||||
T Consensus 28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~--~~~lv~e~ 102 (327)
T 3aln_A 28 GEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVD---EKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREG--DCWICMEL 102 (327)
T ss_dssp CEEEECSSEEEEEEEETTTTEEEEEEEEECCCC---HHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSS--EEEEEECC
T ss_pred heeccCCCEEEEEEEEcCCCCEEEEEEeecccC---chHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCC--ceEEEEee
Confidence 57999999999999986 789999999854321 123445666666 777889999999999999876 89999999
Q ss_pred cCCCChhhhhh
Q 012224 442 ASNGTLYEHLH 452 (468)
Q Consensus 442 ~~~GsL~~~L~ 452 (468)
+++ +|.+++.
T Consensus 103 ~~~-~l~~~~~ 112 (327)
T 3aln_A 103 MST-SFDKFYK 112 (327)
T ss_dssp CSE-EHHHHHH
T ss_pred cCC-ChHHHHH
Confidence 985 8888775
No 367
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=98.79 E-value=8.9e-09 Score=99.12 Aligned_cols=86 Identities=20% Similarity=0.203 Sum_probs=73.1
Q ss_pred hHhccCCceEEEEEEECCCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCC--CCCccceeeEEEcCCCCcEEEEEEe
Q 012224 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN--HENTGKLLGYCRESSPFTRMLVFDY 441 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~--H~nlv~l~g~~~~~~~~~~~lv~ey 441 (468)
+.||+|+||.||++...+|+.||||++..... .....+.|.+|++++.+++ |+||+++++++.... ..++|||
T Consensus 34 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~--~~~lv~e- 108 (313)
T 3cek_A 34 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA--DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ--YIYMVME- 108 (313)
T ss_dssp EEEECCSSEEEEEEECTTCCEEEEEEEECSSC--CHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSS--EEEEEEC-
T ss_pred EEecCCCCEEEEEEEcCCCcEEEEEEeccccc--cccchHHHHHHHHHHHhccccCCceEEEEEEeecCC--EEEEEEe-
Confidence 67999999999999988899999999854332 2234578999999999997 599999999999876 7899999
Q ss_pred cCCCChhhhhhcC
Q 012224 442 ASNGTLYEHLHCK 454 (468)
Q Consensus 442 ~~~GsL~~~L~~~ 454 (468)
+.+|+|.+++...
T Consensus 109 ~~~~~L~~~l~~~ 121 (313)
T 3cek_A 109 CGNIDLNSWLKKK 121 (313)
T ss_dssp CCSEEHHHHHHHC
T ss_pred cCCCcHHHHHHhc
Confidence 6688999999764
No 368
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=98.79 E-value=6.2e-09 Score=101.21 Aligned_cols=84 Identities=23% Similarity=0.383 Sum_probs=63.7
Q ss_pred hHhccCCceEEEEEEECCCCeEEEEEEeecccccchhhHHHHHHHHHH--HhcCCCCCccceeeEEEc---CCCCcEEEE
Q 012224 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVAD--LARINHENTGKLLGYCRE---SSPFTRMLV 438 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~--l~~l~H~nlv~l~g~~~~---~~~~~~~lv 438 (468)
+.||+|+||.||+|+. +++.||||++.... .+.+..|.++ +..++|+||+++++++.. .+....++|
T Consensus 19 ~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~-------~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv 90 (336)
T 3g2f_A 19 ELIGRGRYGAVYKGSL-DERPVAVKVFSFAN-------RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLV 90 (336)
T ss_dssp EEEEECSSEEEEEEEE-TTEEEEEEEEEGGG-------HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEE
T ss_pred eecccCCCeEEEEEEE-CCeEEEEEEeeccc-------hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEE
Confidence 6899999999999987 68899999984321 2345555554 456899999999986643 112246899
Q ss_pred EEecCCCChhhhhhcCC
Q 012224 439 FDYASNGTLYEHLHCKS 455 (468)
Q Consensus 439 ~ey~~~GsL~~~L~~~~ 455 (468)
|||+++|+|.+++....
T Consensus 91 ~e~~~~g~L~~~l~~~~ 107 (336)
T 3g2f_A 91 MEYYPNGSLXKYLSLHT 107 (336)
T ss_dssp ECCCTTCBHHHHHHHCC
T ss_pred EecCCCCcHHHHHhhcc
Confidence 99999999999997543
No 369
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=98.79 E-value=9.3e-09 Score=100.88 Aligned_cols=87 Identities=22% Similarity=0.235 Sum_probs=69.9
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCC----CcEEEE
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP----FTRMLV 438 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~----~~~~lv 438 (468)
+.||+|+||.||+|... +|+.||||++..... .....+.+.+|+.++.+++|+||+++++++..... ...++|
T Consensus 30 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv 107 (353)
T 3coi_A 30 THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQ--SEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLV 107 (353)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEESSTTS--SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEE
T ss_pred eeEecCCCeEEEEEEECCCCCEEEEEEeccccc--chHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeEEEE
Confidence 67999999999999876 789999999853221 22345678999999999999999999999976541 124999
Q ss_pred EEecCCCChhhhhhc
Q 012224 439 FDYASNGTLYEHLHC 453 (468)
Q Consensus 439 ~ey~~~GsL~~~L~~ 453 (468)
|||++ |+|.+++..
T Consensus 108 ~e~~~-~~l~~~~~~ 121 (353)
T 3coi_A 108 MPFMQ-TDLQKIMGL 121 (353)
T ss_dssp EECCS-EEGGGTTTS
T ss_pred ecccc-CCHHHHhcC
Confidence 99998 689888753
No 370
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=98.77 E-value=1.4e-08 Score=100.38 Aligned_cols=87 Identities=17% Similarity=0.151 Sum_probs=69.9
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCC----CcEEEE
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP----FTRMLV 438 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~----~~~~lv 438 (468)
+.||+|+||.||+|... +|+.||||++..... .....+.+.+|++++.+++|+||+++++++...+. ...++|
T Consensus 31 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~lv 108 (371)
T 2xrw_A 31 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ--NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIV 108 (371)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEECTTS--SHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEEEEE
T ss_pred eeeEecCCEEEEEEEECCCCceEEEEEeccccC--ChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccceEEE
Confidence 67999999999999875 788999999854321 22345678999999999999999999999975431 157999
Q ss_pred EEecCCCChhhhhhc
Q 012224 439 FDYASNGTLYEHLHC 453 (468)
Q Consensus 439 ~ey~~~GsL~~~L~~ 453 (468)
|||++ |+|.+++..
T Consensus 109 ~e~~~-~~l~~~~~~ 122 (371)
T 2xrw_A 109 MELMD-ANLCQVIQM 122 (371)
T ss_dssp EECCS-EEHHHHHHS
T ss_pred EEcCC-CCHHHHHhh
Confidence 99998 578888753
No 371
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.77 E-value=1.1e-09 Score=108.43 Aligned_cols=137 Identities=19% Similarity=0.158 Sum_probs=99.8
Q ss_pred CCEEEEEecCCCCcccCCccc-cCCCCCCEEEccCccccccCChhh-----cCCCCCCEEEccCCCCCC----CCCcCCC
Q 012224 70 DRVLKINISGSSLKGFLAPEL-GLLTYLQELILHGNNLIGIIPKEL-----GLLKRLKILDLGTNQLTG----PIPPEIG 139 (468)
Q Consensus 70 ~~v~~L~L~~n~l~g~~p~~l-~~l~~L~~L~Ls~N~l~g~ip~~~-----~~l~~L~~L~Ls~N~l~g----~iP~~~~ 139 (468)
.+++.|+|++|.++..-...+ ..+.+|++|+|++|.++..-...+ ...++|+.|+|++|.|+. .++..+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 589999999999976433333 345689999999999986544444 346899999999999874 2444557
Q ss_pred CCcccceeecccccCcc----cCChhccCCCCCcEEeccCCCCCccCCCCCCcc--ccccccccccCCCCccC
Q 012224 140 NLTGLVKINLQSNGLTG----RLPAELGNLISLEELHLDRNRLQGAVPAGSNSG--YTANIHGMYASSANLTG 206 (468)
Q Consensus 140 ~l~~L~~L~Ls~N~l~g----~~p~~l~~l~~L~~L~ls~N~l~g~ip~~~~~~--~~~~l~~~~ls~n~l~~ 206 (468)
.+++|++|+|++|.++. .++..+...++|+.|+|++|.++..-....... ....+..+++++|.++.
T Consensus 181 ~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~ 253 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSS 253 (372)
T ss_dssp TCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCH
T ss_pred cCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCH
Confidence 78899999999999984 346677788899999999999874311110000 11357788999998864
No 372
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.77 E-value=6.8e-10 Score=116.72 Aligned_cols=105 Identities=11% Similarity=0.101 Sum_probs=80.8
Q ss_pred CEEEEEecCCC-Ccc-cCCccccCCCCCCEEEccCcccccc----CChhhcCCCCCCEEEccCCCCCC----CCCcCCCC
Q 012224 71 RVLKINISGSS-LKG-FLAPELGLLTYLQELILHGNNLIGI----IPKELGLLKRLKILDLGTNQLTG----PIPPEIGN 140 (468)
Q Consensus 71 ~v~~L~L~~n~-l~g-~~p~~l~~l~~L~~L~Ls~N~l~g~----ip~~~~~l~~L~~L~Ls~N~l~g----~iP~~~~~ 140 (468)
++++|+|+++. ++. .++.....+++|++|+|++|.+++. ++..+..+++|++|+|++|.+++ .++..+.+
T Consensus 139 ~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~ 218 (592)
T 3ogk_B 139 DLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARN 218 (592)
T ss_dssp GCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHH
T ss_pred cCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhh
Confidence 48999998876 221 1233345788999999999998766 55566788999999999999873 34445567
Q ss_pred CcccceeecccccCcccCChhccCCCCCcEEeccCC
Q 012224 141 LTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRN 176 (468)
Q Consensus 141 l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N 176 (468)
+++|+.|+|++|.+.+ +|..+..+++|++|+++.+
T Consensus 219 ~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~ 253 (592)
T 3ogk_B 219 CRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSL 253 (592)
T ss_dssp CTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBC
T ss_pred CCCCcEEeccCccHHH-HHHHHhhhhHHHhhccccc
Confidence 8899999999999885 7788888889999988763
No 373
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=98.76 E-value=3e-09 Score=104.16 Aligned_cols=89 Identities=12% Similarity=0.011 Sum_probs=63.9
Q ss_pred hHhccCCceEEEEEEEC----CCCeEEEEEEeecccccc-------hhhHHHHHHHHHHHhcCCCCCccceeeEEEc---
Q 012224 364 NIIGSSPDSLVYKGTMK----GGPEIAVISLCIKEEHWT-------GYLELYFQREVADLARINHENTGKLLGYCRE--- 429 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~----~g~~vavK~l~~~~~~~~-------~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~--- 429 (468)
+.||+|+||.||+|... ++..+|||+......... ....+.+.+|+..+..++|+||+++++++..
T Consensus 43 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~~~~~~~ 122 (345)
T 2v62_A 43 KKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTEFK 122 (345)
T ss_dssp EEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEEEEEESS
T ss_pred eeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecccccccC
Confidence 67999999999999985 577899999854321100 0112357788999999999999999999877
Q ss_pred -CCCCcEEEEEEecCCCChhhhhhcCC
Q 012224 430 -SSPFTRMLVFDYASNGTLYEHLHCKS 455 (468)
Q Consensus 430 -~~~~~~~lv~ey~~~GsL~~~L~~~~ 455 (468)
.. ..++||||+ +|+|.+++....
T Consensus 123 ~~~--~~~lv~e~~-~~~L~~~l~~~~ 146 (345)
T 2v62_A 123 GRS--YRFMVMERL-GIDLQKISGQNG 146 (345)
T ss_dssp SCE--EEEEEEECE-EEEHHHHCBGGG
T ss_pred CCc--EEEEEEecc-CCCHHHHHHhcC
Confidence 33 689999999 999999997643
No 374
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=98.75 E-value=1.5e-09 Score=104.42 Aligned_cols=89 Identities=18% Similarity=0.172 Sum_probs=66.5
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeeccccc--chhhHHHHHHHHHHHhcC----CCCCccceeeEEEcCCCCcEE
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHW--TGYLELYFQREVADLARI----NHENTGKLLGYCRESSPFTRM 436 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~--~~~~~~~f~~e~~~l~~l----~H~nlv~l~g~~~~~~~~~~~ 436 (468)
+.||+|+||.||+|... +|+.||||++....... .......+.+|++++.++ +|+||+++++++...+ ..+
T Consensus 37 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~~--~~~ 114 (312)
T 2iwi_A 37 PLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQE--GFM 114 (312)
T ss_dssp EEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-------CE
T ss_pred eEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecCC--eEE
Confidence 78999999999999875 78999999985432110 001233566789999888 8999999999998766 789
Q ss_pred EEEEe-cCCCChhhhhhcC
Q 012224 437 LVFDY-ASNGTLYEHLHCK 454 (468)
Q Consensus 437 lv~ey-~~~GsL~~~L~~~ 454 (468)
+|+|| +++|+|.+++..+
T Consensus 115 ~v~e~~~~~~~L~~~l~~~ 133 (312)
T 2iwi_A 115 LVLERPLPAQDLFDYITEK 133 (312)
T ss_dssp EEEECCSSEEEHHHHHHHH
T ss_pred EEEEecCCCCCHHHHHHhc
Confidence 99999 8999999999754
No 375
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=98.75 E-value=7.4e-09 Score=102.36 Aligned_cols=87 Identities=22% Similarity=0.153 Sum_probs=62.3
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCC----CCcEEEE
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS----PFTRMLV 438 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~----~~~~~lv 438 (468)
+.||+|+||.||+|... +|+.||||++..... .....+.+.+|++++.+++|+||+++++++.... ....++|
T Consensus 35 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~~lv 112 (367)
T 2fst_X 35 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ--SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 112 (367)
T ss_dssp EECC----CCEEEEEETTTTEEEEEEECSSTTS--SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEE
T ss_pred eEEeecCCeEEEEEEECCCCCEEEEEEeCcccc--CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCeEEEE
Confidence 67999999999999865 789999999843221 2234567889999999999999999999987531 1257999
Q ss_pred EEecCCCChhhhhhc
Q 012224 439 FDYASNGTLYEHLHC 453 (468)
Q Consensus 439 ~ey~~~GsL~~~L~~ 453 (468)
+||+ +|+|.++++.
T Consensus 113 ~e~~-~~~L~~~~~~ 126 (367)
T 2fst_X 113 THLM-GADLNNIVKC 126 (367)
T ss_dssp EECC-CEECC-----
T ss_pred eccc-CCCHHHHHhc
Confidence 9999 6899998865
No 376
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=98.75 E-value=2.8e-09 Score=104.64 Aligned_cols=79 Identities=11% Similarity=0.107 Sum_probs=65.4
Q ss_pred hHhccCCceEEEEEEECC---------CCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccc------------
Q 012224 364 NIIGSSPDSLVYKGTMKG---------GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGK------------ 422 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~~---------g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~------------ 422 (468)
+.||+|+||.||+|.... ++.||||.+... +.+.+|++++.+++|+|||+
T Consensus 48 ~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~---------~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 118 (352)
T 2jii_A 48 SFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD---------GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLA 118 (352)
T ss_dssp EEEEEETTEEEEEEEECC-----------CEEEEEEETT---------STHHHHHHHHHHHCCHHHHHHHHHHTTCTTCS
T ss_pred EEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc---------chHHHHHHHHHHhcccchhhhhhhhccCCccC
Confidence 679999999999998763 789999998421 35889999999999999998
Q ss_pred ---eeeEEEc-CCCCcEEEEEEecCCCChhhhhhcC
Q 012224 423 ---LLGYCRE-SSPFTRMLVFDYASNGTLYEHLHCK 454 (468)
Q Consensus 423 ---l~g~~~~-~~~~~~~lv~ey~~~GsL~~~L~~~ 454 (468)
+++++.. .. ..++||||+ +|+|.+++...
T Consensus 119 i~~~~~~~~~~~~--~~~lv~e~~-~~~L~~~l~~~ 151 (352)
T 2jii_A 119 IPTCMGFGVHQDK--YRFLVLPSL-GRSLQSALDVS 151 (352)
T ss_dssp CCCCCEEEEETTT--EEEEEEECC-CEEHHHHHHHS
T ss_pred ccchhhccccCCc--EEEEEecCC-CcCHHHHHHhC
Confidence 6778775 33 789999999 99999999865
No 377
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=98.74 E-value=8.6e-09 Score=98.17 Aligned_cols=88 Identities=18% Similarity=0.228 Sum_probs=70.5
Q ss_pred hHhccCCceEEEEEEE-CCCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEec
Q 012224 364 NIIGSSPDSLVYKGTM-KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~ 442 (468)
+.||+|+||.||+|+. .+|+.||||++..... .+++.+|++++.+++|+++++.+.+|.... ...++|+||+
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~-~~~~lv~e~~ 87 (296)
T 3uzp_A 15 RKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK------HPQLHIESKIYKMMQGGVGIPTIRWCGAEG-DYNVMVMELL 87 (296)
T ss_dssp EEEEEETTEEEEEEEETTTTEEEEEEEEESCSS------CCHHHHHHHHHHHHTTSTTCCCEEEEEEET-TEEEEEEECC
T ss_pred EEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc------hhHHHHHHHHHHHhhcCCCCCccccccCCC-CceEEEEEec
Confidence 6799999999999987 4889999999854332 236889999999999999888888775433 2679999999
Q ss_pred CCCChhhhhhcCCCCcc
Q 012224 443 SNGTLYEHLHCKSSSLY 459 (468)
Q Consensus 443 ~~GsL~~~L~~~~~~~~ 459 (468)
+|+|.++++..+..++
T Consensus 88 -~~~L~~~~~~~~~~~~ 103 (296)
T 3uzp_A 88 -GPSLEDLFNFCSRKFS 103 (296)
T ss_dssp -CCBHHHHHHHTTTCCC
T ss_pred -CCCHHHHHHhhccCCC
Confidence 9999999985544433
No 378
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.74 E-value=1.6e-09 Score=101.46 Aligned_cols=80 Identities=24% Similarity=0.248 Sum_probs=68.8
Q ss_pred cCCCCCCEEEccCccccc--cCChhhcCCCCCCEEEccCCCCCCCCCcCCCCCc--ccceeecccccCcccCCh------
Q 012224 91 GLLTYLQELILHGNNLIG--IIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLT--GLVKINLQSNGLTGRLPA------ 160 (468)
Q Consensus 91 ~~l~~L~~L~Ls~N~l~g--~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~--~L~~L~Ls~N~l~g~~p~------ 160 (468)
.++++|+.|+|++|.|++ .+|..+..+++|+.|||++|+|++. ..+..+. +|+.|+|++|.+++.+|.
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~ 244 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYIS 244 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHH
Confidence 468899999999999998 6778888999999999999999965 4455555 999999999999988873
Q ss_pred -hccCCCCCcEEe
Q 012224 161 -ELGNLISLEELH 172 (468)
Q Consensus 161 -~l~~l~~L~~L~ 172 (468)
.+..+++|+.||
T Consensus 245 ~il~~~P~L~~LD 257 (267)
T 3rw6_A 245 AIRERFPKLLRLD 257 (267)
T ss_dssp HHHHHCTTCCEES
T ss_pred HHHHHCcccCeEC
Confidence 367889999887
No 379
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=98.74 E-value=7.8e-09 Score=99.97 Aligned_cols=87 Identities=25% Similarity=0.324 Sum_probs=66.5
Q ss_pred hHhccCCceEEEEEEE--CCCCeEEEEEEeecccccchhhHHHHHHHHHHHhcC---CCCCccceeeEEE-----cCCCC
Q 012224 364 NIIGSSPDSLVYKGTM--KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI---NHENTGKLLGYCR-----ESSPF 433 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~--~~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l---~H~nlv~l~g~~~-----~~~~~ 433 (468)
+.||+|+||.||+|.. .+|+.||||++...... ......+.+|++++.++ +|+||++++++|. ...
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~-- 92 (326)
T 1blx_A 17 AEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGE--EGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRET-- 92 (326)
T ss_dssp EEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCT--TSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEE--
T ss_pred eeecccccEEEEEEEecCCCCEEEEEEEeccCccc--ccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCCc--
Confidence 6899999999999987 36888999998654321 11123466677766655 8999999999987 333
Q ss_pred cEEEEEEecCCCChhhhhhcCC
Q 012224 434 TRMLVFDYASNGTLYEHLHCKS 455 (468)
Q Consensus 434 ~~~lv~ey~~~GsL~~~L~~~~ 455 (468)
..++|+||++ |+|.+++....
T Consensus 93 ~~~lv~e~~~-~~L~~~l~~~~ 113 (326)
T 1blx_A 93 KLTLVFEHVD-QDLTTYLDKVP 113 (326)
T ss_dssp EEEEEEECCS-CBHHHHHHHSC
T ss_pred eEEEEEecCC-CCHHHHHHhcc
Confidence 6889999998 79999997643
No 380
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=98.74 E-value=9.4e-09 Score=103.54 Aligned_cols=80 Identities=23% Similarity=0.383 Sum_probs=62.5
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCC----CCcEEEE
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS----PFTRMLV 438 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~----~~~~~lv 438 (468)
++||+|+||.||+|+.. +|+.||||++..... .+.+|++++++++|+|||+++++|.... ....++|
T Consensus 60 ~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~--------~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv 131 (420)
T 1j1b_A 60 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR--------FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLV 131 (420)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEECCTT--------SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEE
T ss_pred eEEeeCCCEEEEEEEECCCCcEEEEEEecccch--------hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEee
Confidence 67999999999999986 699999999853221 2346999999999999999999885421 1125689
Q ss_pred EEecCCCChhhhhh
Q 012224 439 FDYASNGTLYEHLH 452 (468)
Q Consensus 439 ~ey~~~GsL~~~L~ 452 (468)
|||+++ ++.+.+.
T Consensus 132 ~e~~~~-~l~~~~~ 144 (420)
T 1j1b_A 132 LDYVPE-TVYRVAR 144 (420)
T ss_dssp EECCCE-EHHHHHH
T ss_pred hhcccc-cHHHHHH
Confidence 999986 6666654
No 381
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=98.73 E-value=1.5e-08 Score=98.88 Aligned_cols=84 Identities=10% Similarity=0.103 Sum_probs=63.2
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCC--CCcEEEEEE
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS--PFTRMLVFD 440 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~--~~~~~lv~e 440 (468)
++||+|+||.||+|... +|+.||||++.... ...++ ....+..++|+||+++++++.... ....++|||
T Consensus 35 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~e---~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e 106 (336)
T 3fhr_A 35 QVLGLGVNGKVLECFHRRTGQKCALKLLYDSP-----KARQE---VDHHWQASGGPHIVCILDVYENMHHGKRCLLIIME 106 (336)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEESSH-----HHHHH---HHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEE
T ss_pred eeeeeCCCeEEEEEEECCCCCEEEEEEecCcH-----HHHHH---HHHHHHhcCCCChHHHHHHHhhccCCCceEEEEEe
Confidence 46999999999999987 79999999984211 11222 223356679999999999986521 114789999
Q ss_pred ecCCCChhhhhhcCC
Q 012224 441 YASNGTLYEHLHCKS 455 (468)
Q Consensus 441 y~~~GsL~~~L~~~~ 455 (468)
|+++|+|.+++....
T Consensus 107 ~~~gg~L~~~l~~~~ 121 (336)
T 3fhr_A 107 CMEGGELFSRIQERG 121 (336)
T ss_dssp CCTTEEHHHHHHTC-
T ss_pred ccCCCCHHHHHHhcC
Confidence 999999999998654
No 382
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=98.72 E-value=7.3e-09 Score=98.57 Aligned_cols=88 Identities=18% Similarity=0.221 Sum_probs=69.3
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEec
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~ 442 (468)
+.||+|+||.||+|... +++.||||.+..... .+.+.+|++++.+++|++++..+++|.... +..++||||+
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~-~~~~lv~e~~ 87 (296)
T 4hgt_A 15 RKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK------HPQLHIESKIYKMMQGGVGIPTIRWCGAEG-DYNVMVMELL 87 (296)
T ss_dssp EEEEECSSSEEEEEEETTTTEEEEEEEEEC---------CCCHHHHHHHHHHHTTSTTCCCEEEEEEET-TEEEEEEECC
T ss_pred eeecCCCCeEEEEEEEcCCCceEEEEeeccccc------chHHHHHHHHHHHhcCCCCCCeeeeecCCC-CceEEEEEcc
Confidence 78999999999999874 788999998744322 235888999999999999888888775432 2679999999
Q ss_pred CCCChhhhhhcCCCCcc
Q 012224 443 SNGTLYEHLHCKSSSLY 459 (468)
Q Consensus 443 ~~GsL~~~L~~~~~~~~ 459 (468)
+|+|.+++......++
T Consensus 88 -~~~L~~~~~~~~~~~~ 103 (296)
T 4hgt_A 88 -GPSLEDLFNFCSRKFS 103 (296)
T ss_dssp -CCBHHHHHHHTTSCCC
T ss_pred -CCCHHHHHHHhcCCCC
Confidence 9999999985544443
No 383
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=98.72 E-value=1.4e-08 Score=97.84 Aligned_cols=84 Identities=12% Similarity=0.043 Sum_probs=58.2
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCCCcEEEEEEec
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~~~~~lv~ey~ 442 (468)
+.||+|+||.||+|... +|+.||||++..... .....+.+.++..++..++|+||+++++++...+ ..++||||+
T Consensus 31 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~--~~~lv~e~~ 106 (318)
T 2dyl_A 31 GEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGN--KEENKRILMDLDVVLKSHDCPYIVQCFGTFITNT--DVFIAMELM 106 (318)
T ss_dssp EEC------CEEEEEETTTCCEEEEEEEETTSC--HHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--EEEEEECCC
T ss_pred ceeeecCCeeEEEEEEecCCeEEEEEEeccccc--chHHHHHHHHHHHHHHhcCCCceeeEEEEEecCC--cEEEEEecc
Confidence 67999999999999986 799999999854321 1122334555556788889999999999999876 899999999
Q ss_pred CCCChhhhhh
Q 012224 443 SNGTLYEHLH 452 (468)
Q Consensus 443 ~~GsL~~~L~ 452 (468)
++.+..+..
T Consensus 107 -~~~~~~l~~ 115 (318)
T 2dyl_A 107 -GTCAEKLKK 115 (318)
T ss_dssp -SEEHHHHHH
T ss_pred -CCcHHHHHH
Confidence 444544443
No 384
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=98.69 E-value=2.3e-08 Score=98.84 Aligned_cols=88 Identities=13% Similarity=0.001 Sum_probs=57.1
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHH---HHHhcCCCCCcccee-------eEEEcCCC
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREV---ADLARINHENTGKLL-------GYCRESSP 432 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~---~~l~~l~H~nlv~l~-------g~~~~~~~ 432 (468)
+.||+|+||.||+|... +|+.||||++...... .....+.+.+|+ +.+.+ +||||++++ +++.....
T Consensus 68 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~~~~~~ 145 (371)
T 3q60_A 68 EPLRVGDRSVVFLVRDVERLEDFALKVFTMGAEN-SRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAVAVQSQ 145 (371)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEECCSTT-HHHHHHHHHHHHHHHHHHHC-----------CBCCCCEEEEETTS
T ss_pred eeccCCCCEEEEEEEECCCCceeEEEEEEecccc-cccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehheecCCC
Confidence 68999999999999976 7899999999654321 223455677884 55555 799977744 44432210
Q ss_pred ---------------CcEEEEEEecCCCChhhhhhcC
Q 012224 433 ---------------FTRMLVFDYASNGTLYEHLHCK 454 (468)
Q Consensus 433 ---------------~~~~lv~ey~~~GsL~~~L~~~ 454 (468)
...++|||||+ |+|.++++..
T Consensus 146 ~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~ 181 (371)
T 3q60_A 146 PPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTL 181 (371)
T ss_dssp CSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHH
T ss_pred CCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHh
Confidence 13799999999 8999999853
No 385
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=98.68 E-value=2.4e-08 Score=100.77 Aligned_cols=84 Identities=18% Similarity=0.152 Sum_probs=69.0
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcC------CCCCccceeeEEEcCCCCcEE
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI------NHENTGKLLGYCRESSPFTRM 436 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l------~H~nlv~l~g~~~~~~~~~~~ 436 (468)
+.||+|+||.||+|... +++.||||++.... ...+.+.+|++++..+ .|+||+++++++.... ..+
T Consensus 103 ~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~--~~~ 175 (429)
T 3kvw_A 103 KVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-----RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRN--HIC 175 (429)
T ss_dssp EEEEESSSEEEEEEEETTTTEEEEEEEECSCH-----HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETT--EEE
T ss_pred EEcccCccEEEEEEEECCCCcEEEEEEECCcc-----chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCC--eEE
Confidence 78999999999999876 68899999984321 2345677888888776 5679999999998876 899
Q ss_pred EEEEecCCCChhhhhhcCC
Q 012224 437 LVFDYASNGTLYEHLHCKS 455 (468)
Q Consensus 437 lv~ey~~~GsL~~~L~~~~ 455 (468)
+||||++ |+|.+++....
T Consensus 176 lv~e~~~-~~L~~~l~~~~ 193 (429)
T 3kvw_A 176 MTFELLS-MNLYELIKKNK 193 (429)
T ss_dssp EEECCCC-CBHHHHHHHTT
T ss_pred EEEeccC-CCHHHHHHhcc
Confidence 9999996 69999997654
No 386
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=98.68 E-value=8.3e-09 Score=102.55 Aligned_cols=83 Identities=16% Similarity=0.071 Sum_probs=66.6
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCC--------CCCccceeeEEE----cC
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN--------HENTGKLLGYCR----ES 430 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~--------H~nlv~l~g~~~----~~ 430 (468)
+.||+|+||.||+|... +|+.||||++... ....+.+.+|++++.+++ |+||+++++++. ..
T Consensus 43 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~ 117 (397)
T 1wak_A 43 RKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-----EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNG 117 (397)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECSC-----HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTE
T ss_pred EEeeecCCeeEEEEEecCCCeEEEEEEEecC-----CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCC
Confidence 68999999999999875 7889999998422 123567899999999986 788999999987 33
Q ss_pred CCCcEEEEEEecCCCChhhhhhcC
Q 012224 431 SPFTRMLVFDYASNGTLYEHLHCK 454 (468)
Q Consensus 431 ~~~~~~lv~ey~~~GsL~~~L~~~ 454 (468)
. ..++||||+ +|+|.+++...
T Consensus 118 ~--~~~lv~e~~-~~~l~~~~~~~ 138 (397)
T 1wak_A 118 T--HICMVFEVL-GHHLLKWIIKS 138 (397)
T ss_dssp E--EEEEEECCC-CCBHHHHHHHT
T ss_pred c--eEEEEEecc-CccHHHHHHhc
Confidence 3 689999999 56777777544
No 387
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=98.66 E-value=2.4e-08 Score=102.27 Aligned_cols=88 Identities=19% Similarity=0.147 Sum_probs=67.5
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCcc-ceeeEEEcCCCCcEEEEEEe
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTG-KLLGYCRESSPFTRMLVFDY 441 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv-~l~g~~~~~~~~~~~lv~ey 441 (468)
+.||+|+||.||+|+.. +|+.||||++..... .+++..|++++..++|.+.+ .+..++...+ ..++||||
T Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~------~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~--~~~lvme~ 84 (483)
T 3sv0_A 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK------HPQLLYESKIYRILQGGTGIPNVRWFGVEGD--YNVLVMDL 84 (483)
T ss_dssp CCCEECSSCEEEEEEETTTCCEEEEEEEETTCS------SCCHHHHHHHHHHTTTSTTCCCEEEEEEETT--EEEEEEEC
T ss_pred EEEeeCCCEEEEEEEECCCCcEEEEEEeccccc------cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCC--EEEEEEEC
Confidence 67999999999999874 799999998754332 13588899999999875555 4545555554 78999999
Q ss_pred cCCCChhhhhhcCCCCccc
Q 012224 442 ASNGTLYEHLHCKSSSLYI 460 (468)
Q Consensus 442 ~~~GsL~~~L~~~~~~~~~ 460 (468)
+ +|+|.++++.....+..
T Consensus 85 ~-g~sL~~ll~~~~~~l~~ 102 (483)
T 3sv0_A 85 L-GPSLEDLFNFCSRKLSL 102 (483)
T ss_dssp C-CCBHHHHHHHTTTCCCH
T ss_pred C-CCCHHHHHHhhcCCCCH
Confidence 9 99999999865444443
No 388
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=98.65 E-value=1.8e-08 Score=100.63 Aligned_cols=78 Identities=17% Similarity=0.307 Sum_probs=60.4
Q ss_pred hHhccCCceEEEEEEECCCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEcCCC----CcEEEEE
Q 012224 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP----FTRMLVF 439 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~~~~----~~~~lv~ 439 (468)
++||+|+||.||+|+...+..+|+|++..... ...+|++++++++|+|||++++++..... ...++||
T Consensus 46 ~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~--------~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~ 117 (394)
T 4e7w_A 46 KVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR--------FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVL 117 (394)
T ss_dssp EEEEEETTEEEEEEEETTTEEEEEEEEECCTT--------SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEE
T ss_pred EEEeeCCCeEEEEEEECCCCeEEEEEEecCcc--------hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEe
Confidence 68999999999999997666799998843221 12369999999999999999999865431 1267999
Q ss_pred EecCCCChhh
Q 012224 440 DYASNGTLYE 449 (468)
Q Consensus 440 ey~~~GsL~~ 449 (468)
||++++.+..
T Consensus 118 e~~~~~l~~~ 127 (394)
T 4e7w_A 118 EYVPETVYRA 127 (394)
T ss_dssp ECCSEEHHHH
T ss_pred eccCccHHHH
Confidence 9998754433
No 389
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=98.64 E-value=1.9e-08 Score=97.59 Aligned_cols=84 Identities=17% Similarity=0.219 Sum_probs=69.6
Q ss_pred hHhccCCceEEEEEEE-C-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCC------ccceeeEEEcCCCCcE
Q 012224 364 NIIGSSPDSLVYKGTM-K-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHEN------TGKLLGYCRESSPFTR 435 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~-~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~n------lv~l~g~~~~~~~~~~ 435 (468)
+.||+|+||.||+|.. . +|+.||||++.... ...+.+.+|++++.+++|++ ++++++++...+ ..
T Consensus 20 ~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~--~~ 92 (339)
T 1z57_A 20 DTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-----RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHG--HI 92 (339)
T ss_dssp EEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-----HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETT--EE
T ss_pred EEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-----chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCC--cE
Confidence 6799999999999986 3 68899999984221 23567889999998887665 999999998876 89
Q ss_pred EEEEEecCCCChhhhhhcCC
Q 012224 436 MLVFDYASNGTLYEHLHCKS 455 (468)
Q Consensus 436 ~lv~ey~~~GsL~~~L~~~~ 455 (468)
++||||+ +|+|.+++....
T Consensus 93 ~lv~e~~-~~~l~~~l~~~~ 111 (339)
T 1z57_A 93 CIVFELL-GLSTYDFIKENG 111 (339)
T ss_dssp EEEEECC-CCBHHHHHHHTT
T ss_pred EEEEcCC-CCCHHHHHHhcC
Confidence 9999999 899999997654
No 390
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=98.62 E-value=1.4e-08 Score=98.20 Aligned_cols=89 Identities=15% Similarity=0.170 Sum_probs=71.2
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeeccccc--chhhHHHHHHHHHHHhcCC--CCCccceeeEEEcCCCCcEEEE
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHW--TGYLELYFQREVADLARIN--HENTGKLLGYCRESSPFTRMLV 438 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~--~~~~~~~f~~e~~~l~~l~--H~nlv~l~g~~~~~~~~~~~lv 438 (468)
+.||+|+||.||+|... +|+.||||.+....... .....+.+.+|++++.+++ |+||+++++++...+ ..++|
T Consensus 49 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~--~~~lv 126 (320)
T 3a99_A 49 PLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPD--SFVLI 126 (320)
T ss_dssp EECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSS--EEEEE
T ss_pred EEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCC--cEEEE
Confidence 68999999999999875 78899999986443110 0012245778999999996 599999999999876 89999
Q ss_pred EEecCC-CChhhhhhcC
Q 012224 439 FDYASN-GTLYEHLHCK 454 (468)
Q Consensus 439 ~ey~~~-GsL~~~L~~~ 454 (468)
+||+.. |+|.+++..+
T Consensus 127 ~e~~~~~~~L~~~l~~~ 143 (320)
T 3a99_A 127 LERPEPVQDLFDFITER 143 (320)
T ss_dssp EECCSSEEEHHHHHHHH
T ss_pred EEcCCCCccHHHHHhcc
Confidence 999986 8999999753
No 391
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=98.62 E-value=1.4e-08 Score=96.61 Aligned_cols=82 Identities=11% Similarity=0.105 Sum_probs=63.4
Q ss_pred hHhccCCceEEEEEEECCCCeEEEEEEeecccc--------------cchhhHHHHHHHHHHHhcCCCCCccceeeEEEc
Q 012224 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEH--------------WTGYLELYFQREVADLARINHENTGKLLGYCRE 429 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~~g~~vavK~l~~~~~~--------------~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~ 429 (468)
+.||+|+||.||+|...+|+.||||.+...... |.......|.+|++++.+++ | +++.+++..
T Consensus 96 ~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~~~~~ 172 (282)
T 1zar_A 96 KLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPKVYAW 172 (282)
T ss_dssp EEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCCEEEE
T ss_pred CEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCeEEec
Confidence 789999999999999878999999998533211 00123567999999999999 5 777776654
Q ss_pred CCCCcEEEEEEecCCCChhhhhh
Q 012224 430 SSPFTRMLVFDYASNGTLYEHLH 452 (468)
Q Consensus 430 ~~~~~~~lv~ey~~~GsL~~~L~ 452 (468)
. ..++||||+++|+|.+ +.
T Consensus 173 ~---~~~lvmE~~~g~~L~~-l~ 191 (282)
T 1zar_A 173 E---GNAVLMELIDAKELYR-VR 191 (282)
T ss_dssp E---TTEEEEECCCCEEGGG-CC
T ss_pred c---ceEEEEEecCCCcHHH-cc
Confidence 3 4699999999999998 53
No 392
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.59 E-value=1.1e-08 Score=107.31 Aligned_cols=107 Identities=16% Similarity=0.153 Sum_probs=80.4
Q ss_pred CCEEEEEecCCCCcccCCcccc-CCCCCCEEEccCc-ccccc-CChhhcCCCCCCEEEccCCCCCCCCCcCCC----CCc
Q 012224 70 DRVLKINISGSSLKGFLAPELG-LLTYLQELILHGN-NLIGI-IPKELGLLKRLKILDLGTNQLTGPIPPEIG----NLT 142 (468)
Q Consensus 70 ~~v~~L~L~~n~l~g~~p~~l~-~l~~L~~L~Ls~N-~l~g~-ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~----~l~ 142 (468)
.+++.|+|+++.+++..+..+. .+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+. .++
T Consensus 105 ~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~ 184 (594)
T 2p1m_B 105 TWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYT 184 (594)
T ss_dssp TTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCC
T ss_pred CCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCC
Confidence 4789999999999887777775 6899999999998 55543 555566899999999999998876554443 567
Q ss_pred ccceeeccccc--Ccc-cCChhccCCCCCcEEeccCC
Q 012224 143 GLVKINLQSNG--LTG-RLPAELGNLISLEELHLDRN 176 (468)
Q Consensus 143 ~L~~L~Ls~N~--l~g-~~p~~l~~l~~L~~L~ls~N 176 (468)
+|+.|+|++|. ++. .++..+..+++|++|++++|
T Consensus 185 ~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~ 221 (594)
T 2p1m_B 185 SLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRA 221 (594)
T ss_dssp CCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTT
T ss_pred cCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCC
Confidence 89999999886 321 12223345688899998887
No 393
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.54 E-value=1.1e-08 Score=90.83 Aligned_cols=111 Identities=17% Similarity=0.234 Sum_probs=88.3
Q ss_pred CCCEEEEEecCC-CCccc----CCccccCCCCCCEEEccCcccccc----CChhhcCCCCCCEEEccCCCCCCC----CC
Q 012224 69 RDRVLKINISGS-SLKGF----LAPELGLLTYLQELILHGNNLIGI----IPKELGLLKRLKILDLGTNQLTGP----IP 135 (468)
Q Consensus 69 ~~~v~~L~L~~n-~l~g~----~p~~l~~l~~L~~L~Ls~N~l~g~----ip~~~~~l~~L~~L~Ls~N~l~g~----iP 135 (468)
...++.|+|++| .+... +...+...+.|++|+|++|.+... +...+...++|++|+|++|.|+.. +.
T Consensus 35 ~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~ 114 (185)
T 1io0_A 35 DPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALV 114 (185)
T ss_dssp CTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHH
T ss_pred CCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHH
Confidence 457999999999 88743 445667788999999999999753 455667778999999999999743 45
Q ss_pred cCCCCCcccceeec--ccccCccc----CChhccCCCCCcEEeccCCCCC
Q 012224 136 PEIGNLTGLVKINL--QSNGLTGR----LPAELGNLISLEELHLDRNRLQ 179 (468)
Q Consensus 136 ~~~~~l~~L~~L~L--s~N~l~g~----~p~~l~~l~~L~~L~ls~N~l~ 179 (468)
..+...++|++|+| ++|.+... +...+...++|++|+|++|.+.
T Consensus 115 ~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 115 EALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 56777889999999 88999853 4455666789999999999875
No 394
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=98.51 E-value=5.5e-08 Score=95.83 Aligned_cols=85 Identities=18% Similarity=0.152 Sum_probs=68.9
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCC-----------CCCccceeeEEEcCC
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-----------HENTGKLLGYCRESS 431 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~-----------H~nlv~l~g~~~~~~ 431 (468)
+.||+|+||.||+|+.. +|+.||||++... ....+.+.+|++++.+++ |+||+++++++....
T Consensus 25 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~ 99 (373)
T 1q8y_A 25 RKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-----KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKG 99 (373)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECSC-----HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEE
T ss_pred EeeeecCCeEEEEEEecCCCcEEEEEEecCC-----ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhccC
Confidence 67999999999999875 7899999998422 123567889999999886 899999999987532
Q ss_pred C--CcEEEEEEecCCCChhhhhhcC
Q 012224 432 P--FTRMLVFDYASNGTLYEHLHCK 454 (468)
Q Consensus 432 ~--~~~~lv~ey~~~GsL~~~L~~~ 454 (468)
+ ...++||||+ +|+|.+++...
T Consensus 100 ~~~~~~~lv~e~~-~~~L~~~~~~~ 123 (373)
T 1q8y_A 100 PNGVHVVMVFEVL-GENLLALIKKY 123 (373)
T ss_dssp TTEEEEEEEECCC-CEEHHHHHHHT
T ss_pred CCCceEEEEEecC-CCCHHHHHHHh
Confidence 1 1478999999 89999999764
No 395
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=98.51 E-value=9e-08 Score=94.95 Aligned_cols=84 Identities=24% Similarity=0.154 Sum_probs=68.3
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCC-CC-----CccceeeEEEcCCCCcEE
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HE-----NTGKLLGYCRESSPFTRM 436 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~-H~-----nlv~l~g~~~~~~~~~~~ 436 (468)
+.||+|+||.||+|... +|+.||||++.... ...+++..|++++..++ |+ +++++.+++...+ ..+
T Consensus 60 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~--~~~ 132 (382)
T 2vx3_A 60 SLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK-----AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRN--HLC 132 (382)
T ss_dssp EEEEEETTEEEEEEEETTTTEEEEEEEECSSH-----HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETT--EEE
T ss_pred EEEeecCCEEEEEEEEcCCCcEEEEEEEeccH-----HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCC--ceE
Confidence 78999999999999876 78899999984321 23456788888888875 55 3999999998876 899
Q ss_pred EEEEecCCCChhhhhhcCC
Q 012224 437 LVFDYASNGTLYEHLHCKS 455 (468)
Q Consensus 437 lv~ey~~~GsL~~~L~~~~ 455 (468)
+||||++ |+|.+++....
T Consensus 133 lv~e~~~-~~L~~~l~~~~ 150 (382)
T 2vx3_A 133 LVFEMLS-YNLYDLLRNTN 150 (382)
T ss_dssp EEEECCC-CBHHHHHHHTT
T ss_pred EEEecCC-CCHHHHHhhcC
Confidence 9999996 59999998653
No 396
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.50 E-value=2.8e-09 Score=94.76 Aligned_cols=123 Identities=19% Similarity=0.118 Sum_probs=90.0
Q ss_pred cCCccccCCCCCCEEEccCc-ccccc----CChhhcCCCCCCEEEccCCCCCCC----CCcCCCCCcccceeecccccCc
Q 012224 85 FLAPELGLLTYLQELILHGN-NLIGI----IPKELGLLKRLKILDLGTNQLTGP----IPPEIGNLTGLVKINLQSNGLT 155 (468)
Q Consensus 85 ~~p~~l~~l~~L~~L~Ls~N-~l~g~----ip~~~~~l~~L~~L~Ls~N~l~g~----iP~~~~~l~~L~~L~Ls~N~l~ 155 (468)
.+...+...+.|++|+|++| .+... +...+...++|++|||++|++... +...+...++|++|+|++|.++
T Consensus 27 ~l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~ 106 (185)
T 1io0_A 27 TLKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFIS 106 (185)
T ss_dssp HHHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCC
T ss_pred HHHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCC
Confidence 34456778899999999999 88743 455677789999999999998632 2334555688999999999998
Q ss_pred cc----CChhccCCCCCcEEec--cCCCCCccCCCCCCccccccccccccCCCCccCccCCCCCCEEEcccCcCc
Q 012224 156 GR----LPAELGNLISLEELHL--DRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFV 224 (468)
Q Consensus 156 g~----~p~~l~~l~~L~~L~l--s~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~~~~l~~L~~l~ls~N~l~ 224 (468)
.. +...+...++|++|+| ++|.++..-..... ..+...++|+.|+|++|.+.
T Consensus 107 ~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~-----------------~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 107 GSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIA-----------------NMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHH-----------------HHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHH-----------------HHHHhCCCcCEEeccCCCCC
Confidence 53 5667778889999999 88988632110000 01223357999999999875
No 397
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.49 E-value=3.6e-09 Score=111.15 Aligned_cols=166 Identities=11% Similarity=0.028 Sum_probs=108.3
Q ss_pred CCEEEEEecC---------CCCcccCCcccc-CCCCCCEEEccCccccccCChhhc-CCCCCCEEEcc--C----CCCCC
Q 012224 70 DRVLKINISG---------SSLKGFLAPELG-LLTYLQELILHGNNLIGIIPKELG-LLKRLKILDLG--T----NQLTG 132 (468)
Q Consensus 70 ~~v~~L~L~~---------n~l~g~~p~~l~-~l~~L~~L~Ls~N~l~g~ip~~~~-~l~~L~~L~Ls--~----N~l~g 132 (468)
.+++.|+|++ +.+++.....+. .+++|++|+++.|.+++..+..+. .+++|+.|+|+ + |++++
T Consensus 338 ~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~ 417 (594)
T 2p1m_B 338 KDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTL 417 (594)
T ss_dssp TTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTC
T ss_pred CCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccC
Confidence 4788888843 455543333333 478889998888888877666665 58899999998 4 55552
Q ss_pred C-----CCcCCCCCcccceeecccccCcccCChhccC-CCCCcEEeccCCCCCccCCCCCCccccccccccccCCCCccC
Q 012224 133 P-----IPPEIGNLTGLVKINLQSNGLTGRLPAELGN-LISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG 206 (468)
Q Consensus 133 ~-----iP~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~-l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~~ 206 (468)
. ++..+..+++|+.|+|++ .+++..+..+.. +++|+.|++++|.+++..+..... ...++..+++++|.+++
T Consensus 418 ~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~-~~~~L~~L~L~~n~~~~ 495 (594)
T 2p1m_B 418 EPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLS-GCDSLRKLEIRDCPFGD 495 (594)
T ss_dssp CCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHH-HCTTCCEEEEESCSCCH
T ss_pred CchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHh-cCCCcCEEECcCCCCcH
Confidence 1 111255678889999977 666665666655 788999999988886543321100 01356677888887743
Q ss_pred ------ccCCCCCCEEEcccCcCccCCCccc-cCCCCC
Q 012224 207 ------LCHLSQLKVADFSYNFFVGSIPKCL-EYLPST 237 (468)
Q Consensus 207 ------~~~l~~L~~l~ls~N~l~g~ip~~~-~~l~~~ 237 (468)
...+++|+.|++++|+++......+ ..++.+
T Consensus 496 ~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~lp~l 533 (594)
T 2p1m_B 496 KALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKL 533 (594)
T ss_dssp HHHHHTGGGGGGSSEEEEESSCCBHHHHHHHHHHCTTE
T ss_pred HHHHHHHHhCCCCCEEeeeCCCCCHHHHHHHHHhCCCC
Confidence 2346789999999999864433333 334444
No 398
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=98.49 E-value=6.4e-08 Score=94.49 Aligned_cols=84 Identities=13% Similarity=0.143 Sum_probs=67.8
Q ss_pred hHhccCCceEEEEEEEC-CC-CeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCC------ccceeeEEEcCCCCcE
Q 012224 364 NIIGSSPDSLVYKGTMK-GG-PEIAVISLCIKEEHWTGYLELYFQREVADLARINHEN------TGKLLGYCRESSPFTR 435 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g-~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~n------lv~l~g~~~~~~~~~~ 435 (468)
+.||+|+||.||+|... ++ ..||||++... ....+.+.+|++++.+++|++ ++.+.+++.... ..
T Consensus 25 ~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~--~~ 97 (355)
T 2eu9_A 25 GNLGEGTFGKVVECLDHARGKSQVALKIIRNV-----GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHG--HM 97 (355)
T ss_dssp EEEEEETTEEEEEEEETTTTTEEEEEEEECSC-----HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETT--EE
T ss_pred EEeeccCCeEEEEEEecCCCceEEEEEEEccc-----ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCC--eE
Confidence 67999999999999875 44 68999998422 123567889999999988776 899999998776 89
Q ss_pred EEEEEecCCCChhhhhhcCC
Q 012224 436 MLVFDYASNGTLYEHLHCKS 455 (468)
Q Consensus 436 ~lv~ey~~~GsL~~~L~~~~ 455 (468)
++||||+ +|++.+++....
T Consensus 98 ~lv~e~~-~~~l~~~l~~~~ 116 (355)
T 2eu9_A 98 CIAFELL-GKNTFEFLKENN 116 (355)
T ss_dssp EEEEECC-CCBHHHHHHHTT
T ss_pred EEEEecc-CCChHHHHHhcc
Confidence 9999999 677888886543
No 399
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.46 E-value=1.7e-07 Score=97.95 Aligned_cols=89 Identities=9% Similarity=-0.020 Sum_probs=62.5
Q ss_pred HhccCCceEEEEEE-ECCCCeEEEEEEeeccc------ccchhhHHHHHHHHHHHhcC-CCCCccceeeEEEcCCCCcEE
Q 012224 365 IIGSSPDSLVYKGT-MKGGPEIAVISLCIKEE------HWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRM 436 (468)
Q Consensus 365 ~lg~G~~g~vy~~~-~~~g~~vavK~l~~~~~------~~~~~~~~~f~~e~~~l~~l-~H~nlv~l~g~~~~~~~~~~~ 436 (468)
..+.|+.|.++++. +-.|+.+|||.+..... .......++|.+|+++|+++ .|+||+++++|+.+.. ..|
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~--~~y 318 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQ--SGW 318 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSS--EEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECC--EEE
Confidence 34566666555542 22588899999854321 11123456899999999999 7999999999999887 899
Q ss_pred EEEEecCCCChhhhhhcCC
Q 012224 437 LVFDYASNGTLYEHLHCKS 455 (468)
Q Consensus 437 lv~ey~~~GsL~~~L~~~~ 455 (468)
|||||+++|+|.++|...+
T Consensus 319 LVMEyv~G~~L~d~i~~~~ 337 (569)
T 4azs_A 319 LVMEKLPGRLLSDMLAAGE 337 (569)
T ss_dssp EEEECCCSEEHHHHHHTTC
T ss_pred EEEecCCCCcHHHHHHhCC
Confidence 9999999999999997643
No 400
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.35 E-value=8.9e-08 Score=94.14 Aligned_cols=18 Identities=22% Similarity=0.613 Sum_probs=14.6
Q ss_pred CCCCCCEEEcccCcCccC
Q 012224 209 HLSQLKVADFSYNFFVGS 226 (468)
Q Consensus 209 ~l~~L~~l~ls~N~l~g~ 226 (468)
++++|+.|++++|.++..
T Consensus 305 ~l~~L~~L~L~~n~i~d~ 322 (362)
T 2ra8_A 305 KIKHLKFINMKYNYLSDE 322 (362)
T ss_dssp HHTTCSEEECCSBBCCHH
T ss_pred cCCcceEEECCCCcCCHH
Confidence 467899999999988754
No 401
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.31 E-value=1.1e-06 Score=85.17 Aligned_cols=85 Identities=16% Similarity=0.078 Sum_probs=47.9
Q ss_pred CCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCCCcCCCCCcccc-eeecccccCcccCChhccCCCCCcEE
Q 012224 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLV-KINLQSNGLTGRLPAELGNLISLEEL 171 (468)
Q Consensus 93 l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~-~L~Ls~N~l~g~~p~~l~~l~~L~~L 171 (468)
+++|+.|+|++|+++..-+..|.++++|+.|+|++| ++..-+..|.++.+|+ .|+|.+ +++..-+..|.+|++|+.+
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l 302 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYV 302 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEE
Confidence 456666666666665433444666666666666665 4422223455666666 666655 4443334555666666666
Q ss_pred eccCCCCC
Q 012224 172 HLDRNRLQ 179 (468)
Q Consensus 172 ~ls~N~l~ 179 (468)
++++|+++
T Consensus 303 ~l~~n~i~ 310 (329)
T 3sb4_A 303 LATGDKIT 310 (329)
T ss_dssp EECSSCCC
T ss_pred EeCCCccC
Confidence 66666655
No 402
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.29 E-value=2e-07 Score=91.61 Aligned_cols=173 Identities=16% Similarity=0.099 Sum_probs=102.3
Q ss_pred CCEEEEEecCCCCcc-c-------CCccccCCCCCCEEEccCccc---------cccCChhhcCCCCCCEEEccCCCCCC
Q 012224 70 DRVLKINISGSSLKG-F-------LAPELGLLTYLQELILHGNNL---------IGIIPKELGLLKRLKILDLGTNQLTG 132 (468)
Q Consensus 70 ~~v~~L~L~~n~l~g-~-------~p~~l~~l~~L~~L~Ls~N~l---------~g~ip~~~~~l~~L~~L~Ls~N~l~g 132 (468)
.+|+.|.+......| . +...+..+++|+.|.+..+.+ .+.++..+..+++|+.|+|++|.-.
T Consensus 107 ~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l- 185 (362)
T 2ra8_A 107 PSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL- 185 (362)
T ss_dssp GGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-
T ss_pred hhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-
Confidence 467777777655543 1 123355677888888866533 1235566677888888888877311
Q ss_pred CCCcCCCCCcccceeecccccCcccCChhcc--CCCCCcEEeccC--CCCCccCC-----CCCCccccccccccccCCCC
Q 012224 133 PIPPEIGNLTGLVKINLQSNGLTGRLPAELG--NLISLEELHLDR--NRLQGAVP-----AGSNSGYTANIHGMYASSAN 203 (468)
Q Consensus 133 ~iP~~~~~l~~L~~L~Ls~N~l~g~~p~~l~--~l~~L~~L~ls~--N~l~g~ip-----~~~~~~~~~~l~~~~ls~n~ 203 (468)
.+|. + .+++|+.|+|..|.++......+. .+++|+.|+|+. |...|... .........++..+++..|.
T Consensus 186 ~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~ 263 (362)
T 2ra8_A 186 SIGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAE 263 (362)
T ss_dssp BCCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCT
T ss_pred eecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCC
Confidence 2343 3 378888888888877644334443 678888888753 22222110 00000112356666666666
Q ss_pred ccC--------ccCCCCCCEEEcccCcCccC----CCcc---ccCCCCCcccCCcCC
Q 012224 204 LTG--------LCHLSQLKVADFSYNFFVGS----IPKC---LEYLPSTSFQGNCLQ 245 (468)
Q Consensus 204 l~~--------~~~l~~L~~l~ls~N~l~g~----ip~~---~~~l~~~~~~~n~~~ 245 (468)
+.. ...+++|+.|||++|.++.. ++.. +.+|..++++.|++.
T Consensus 264 i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~ 320 (362)
T 2ra8_A 264 EQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLS 320 (362)
T ss_dssp THHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCC
T ss_pred CchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCC
Confidence 542 12367899999999998764 3322 355666777777443
No 403
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=98.04 E-value=2.9e-05 Score=77.35 Aligned_cols=144 Identities=15% Similarity=0.147 Sum_probs=88.0
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCCCcCCCCCcccceeecc
Q 012224 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (468)
Q Consensus 71 ~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls 150 (468)
+++.+.|..+ ++..-...|.+ .+|+.++|.+ .+...-+..|.+|++|+.++|+.|+++ .||.......+|+.+.|.
T Consensus 136 ~L~~i~l~~~-i~~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~-~I~~~aF~~~~L~~l~lp 211 (401)
T 4fdw_A 136 QIAKVVLNEG-LKSIGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKIT-KLPASTFVYAGIEEVLLP 211 (401)
T ss_dssp CCSEEECCTT-CCEECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCS-EECTTTTTTCCCSEEECC
T ss_pred CccEEEeCCC-ccEECHHhcCC-CCceEEEeCC-CccEehHHHhhCcccCCeeecCCCcce-EechhhEeecccCEEEeC
Confidence 3555666544 44333344555 3577787775 565445567888888888888888887 566555556788888887
Q ss_pred cccCcccCChhccCCCCCcEEeccCCCCCccCCCCCCccccccccccccCCCCcc-----CccCCCCCCEEEcccCcCc
Q 012224 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLT-----GLCHLSQLKVADFSYNFFV 224 (468)
Q Consensus 151 ~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~l~~~~ls~n~l~-----~~~~l~~L~~l~ls~N~l~ 224 (468)
.| ++..-...|.++++|+.+++..| ++ .|+...... ..+..+.++. .+. .+..+++|+.+++.+|.+.
T Consensus 212 ~~-l~~I~~~aF~~~~~L~~l~l~~~-l~-~I~~~aF~~--~~L~~i~lp~-~i~~I~~~aF~~c~~L~~l~l~~~~~~ 284 (401)
T 4fdw_A 212 VT-LKEIGSQAFLKTSQLKTIEIPEN-VS-TIGQEAFRE--SGITTVKLPN-GVTNIASRAFYYCPELAEVTTYGSTFN 284 (401)
T ss_dssp TT-CCEECTTTTTTCTTCCCEECCTT-CC-EECTTTTTT--CCCSEEEEET-TCCEECTTTTTTCTTCCEEEEESSCCC
T ss_pred Cc-hheehhhHhhCCCCCCEEecCCC-cc-Ccccccccc--CCccEEEeCC-CccEEChhHhhCCCCCCEEEeCCcccc
Confidence 44 55344556777888888888765 33 444433222 2333444422 222 2445677888888777665
No 404
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=97.98 E-value=5.9e-05 Score=75.10 Aligned_cols=165 Identities=13% Similarity=0.126 Sum_probs=86.8
Q ss_pred EEEEEecCCCCcccCCccccCCCCCCEEEccCcccc----------------------ccCChhhcCCCCCCEEEccCCC
Q 012224 72 VLKINISGSSLKGFLAPELGLLTYLQELILHGNNLI----------------------GIIPKELGLLKRLKILDLGTNQ 129 (468)
Q Consensus 72 v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~----------------------g~ip~~~~~l~~L~~L~Ls~N~ 129 (468)
++.++|.+ .++..-+..|.++++|+.++|++|.++ ..-...|.++++|+.++|..|
T Consensus 159 L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~~~~L~~l~lp~~l~~I~~~aF~~~~~L~~l~l~~~- 236 (401)
T 4fdw_A 159 VQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFVYAGIEEVLLPVTLKEIGSQAFLKTSQLKTIEIPEN- 236 (401)
T ss_dssp CCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTTTCCCSEEECCTTCCEECTTTTTTCTTCCCEECCTT-
T ss_pred ceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEeecccCEEEeCCchheehhhHhhCCCCCCEEecCCC-
Confidence 44455543 343333344555555555555555444 222334455555555555543
Q ss_pred CCCCCCc-CCCCCcccceeecccccCcccCChhccCCCCCcEEeccCCCCCc----cCCCCCCccccccccccccCCCCc
Q 012224 130 LTGPIPP-EIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQG----AVPAGSNSGYTANIHGMYASSANL 204 (468)
Q Consensus 130 l~g~iP~-~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g----~ip~~~~~~~~~~l~~~~ls~n~l 204 (468)
++ .|+. .|.+ .+|+.+.| .|.++..-+..|.+|++|+.+++.+|.+.. .|+.....+. .++..++++. .+
T Consensus 237 l~-~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c-~~L~~l~l~~-~i 311 (401)
T 4fdw_A 237 VS-TIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGC-PKLARFEIPE-SI 311 (401)
T ss_dssp CC-EECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTC-TTCCEECCCT-TC
T ss_pred cc-Ccccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCC-ccCCeEEeCC-ce
Confidence 32 2222 2223 45555655 334443335678889999999999887751 2444322211 2344555553 23
Q ss_pred cC-----ccCCCCCCEEEcccCcCccCCCcccc--CCCCCcccCCcC
Q 012224 205 TG-----LCHLSQLKVADFSYNFFVGSIPKCLE--YLPSTSFQGNCL 244 (468)
Q Consensus 205 ~~-----~~~l~~L~~l~ls~N~l~g~ip~~~~--~l~~~~~~~n~~ 244 (468)
.. +..+.+|+.++|..| ++..-+..|. ++..+.+.+|..
T Consensus 312 ~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~~L~~l~l~~n~~ 357 (401)
T 4fdw_A 312 RILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNTGIKEVKVEGTTP 357 (401)
T ss_dssp CEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSSCCCEEEECCSSC
T ss_pred EEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCCCCCEEEEcCCCC
Confidence 32 456788999999655 5533344443 455566777743
No 405
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=97.94 E-value=9.2e-06 Score=75.80 Aligned_cols=85 Identities=16% Similarity=0.249 Sum_probs=57.9
Q ss_pred hHhccCCceEEEEEEE-CCCCe--EEEEEEeeccccc--------------------chhhHHHHHHHHHHHhcCCCCCc
Q 012224 364 NIIGSSPDSLVYKGTM-KGGPE--IAVISLCIKEEHW--------------------TGYLELYFQREVADLARINHENT 420 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~-~~g~~--vavK~l~~~~~~~--------------------~~~~~~~f~~e~~~l~~l~H~nl 420 (468)
+.||+|+||.||+|.. .+|+. ||||.++...... .......+.+|++.+.+++|+++
T Consensus 53 ~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 132 (258)
T 1zth_A 53 GVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKEAGV 132 (258)
T ss_dssp EEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHhCCC
Confidence 6799999999999988 68888 9999874321110 00122468899999999998875
Q ss_pred cceeeEEEcCCCCcEEEEEEecCC-C----Chhhhhh
Q 012224 421 GKLLGYCRESSPFTRMLVFDYASN-G----TLYEHLH 452 (468)
Q Consensus 421 v~l~g~~~~~~~~~~~lv~ey~~~-G----sL~~~L~ 452 (468)
.....+... ..+|||||+.+ | +|.++..
T Consensus 133 ~~p~~~~~~----~~~lVmE~~g~~g~~~~~L~~~~~ 165 (258)
T 1zth_A 133 SVPQPYTYM----KNVLLMEFIGEDELPAPTLVELGR 165 (258)
T ss_dssp CCCCEEEEE----TTEEEEECCEETTEECCBHHHHGG
T ss_pred CCCeEEEcC----CCEEEEEecCCCCCccccHHHHhh
Confidence 333223222 46899999952 5 6666543
No 406
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=97.81 E-value=1.9e-06 Score=84.86 Aligned_cols=86 Identities=9% Similarity=-0.015 Sum_probs=54.1
Q ss_pred hHhccCCceEEEEEEECCCCeEEEEEEeecccc---c-------chhhHHHH--------HHHHHHHhcCCCCCccceee
Q 012224 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEH---W-------TGYLELYF--------QREVADLARINHENTGKLLG 425 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~~g~~vavK~l~~~~~~---~-------~~~~~~~f--------~~e~~~l~~l~H~nlv~l~g 425 (468)
..||+|++|.||+|..++|+.||||.++..... . ........ ..|.+.|.++.+..+....-
T Consensus 101 ~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~vp~p 180 (397)
T 4gyi_A 101 SRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFPVPEP 180 (397)
T ss_dssp EEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCCE
T ss_pred CEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCCCCee
Confidence 679999999999999889999999987532110 0 00011112 34556666665544433222
Q ss_pred EEEcCCCCcEEEEEEecCCCChhhhhhc
Q 012224 426 YCRESSPFTRMLVFDYASNGTLYEHLHC 453 (468)
Q Consensus 426 ~~~~~~~~~~~lv~ey~~~GsL~~~L~~ 453 (468)
+... ..+|||||++++.|.++...
T Consensus 181 ~~~~----~~~LVME~i~G~~L~~l~~~ 204 (397)
T 4gyi_A 181 IAQS----RHTIVMSLVDALPMRQVSSV 204 (397)
T ss_dssp EEEE----TTEEEEECCSCEEGGGCCCC
T ss_pred eecc----CceEEEEecCCccHhhhccc
Confidence 3222 23699999999998776543
No 407
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=97.59 E-value=5.7e-05 Score=75.53 Aligned_cols=53 Identities=15% Similarity=0.137 Sum_probs=40.8
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCC
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINH 417 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H 417 (468)
++||+|+||.||+|... +|+.||||++...... .....+.|.+|+.++..++|
T Consensus 84 ~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~-~~~~~~~~~~E~~~~~~l~~ 137 (413)
T 3dzo_A 84 TVLGQEDPYAYLEATDQETGESFEVHVPYFTERP-PSNAIKQMKEEVLRLRLLRG 137 (413)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEECCSCC-----CCHHHHHHHHGGGGSTT
T ss_pred cccccCCCEEEEEEEecCCCCceEEEEEecCCCc-cHHHHHHHHHHHHHHHhhcc
Confidence 67999999999999965 7999999998533221 12234679999999999988
No 408
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.57 E-value=1.6e-05 Score=69.08 Aligned_cols=82 Identities=15% Similarity=0.182 Sum_probs=36.2
Q ss_pred CCEEEccCccccccCChhhcCCCCCCEEEccCCC-CCCCCCcCCCCC----cccceeeccccc-CcccCChhccCCCCCc
Q 012224 96 LQELILHGNNLIGIIPKELGLLKRLKILDLGTNQ-LTGPIPPEIGNL----TGLVKINLQSNG-LTGRLPAELGNLISLE 169 (468)
Q Consensus 96 L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~-l~g~iP~~~~~l----~~L~~L~Ls~N~-l~g~~p~~l~~l~~L~ 169 (468)
|+.|||+++.++..--..+.++++|+.|+|+++. ++..-=..+..+ ++|++|+|++|. ++..=-..+..+++|+
T Consensus 63 L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L~ 142 (176)
T 3e4g_A 63 IQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNLK 142 (176)
T ss_dssp EEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTCC
T ss_pred EeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCCC
Confidence 4444444444432222234445555555555543 331111112222 245555555543 4432223445566666
Q ss_pred EEeccCCC
Q 012224 170 ELHLDRNR 177 (468)
Q Consensus 170 ~L~ls~N~ 177 (468)
+|+++++.
T Consensus 143 ~L~L~~c~ 150 (176)
T 3e4g_A 143 YLFLSDLP 150 (176)
T ss_dssp EEEEESCT
T ss_pred EEECCCCC
Confidence 66666653
No 409
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.43 E-value=4.1e-05 Score=66.54 Aligned_cols=86 Identities=13% Similarity=0.105 Sum_probs=66.3
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCEEEccCcc-ccccCChhhcCC----CCCCEEEccCCC-CCCCCCcCCCCCcc
Q 012224 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNN-LIGIIPKELGLL----KRLKILDLGTNQ-LTGPIPPEIGNLTG 143 (468)
Q Consensus 70 ~~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~-l~g~ip~~~~~l----~~L~~L~Ls~N~-l~g~iP~~~~~l~~ 143 (468)
-+++.|||+++.++..--..+..+++|++|+|++|. ++..-=..+..+ ++|++|||+++. ++..-=..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 479999999999876544567899999999999995 775433456664 479999999985 66322234678999
Q ss_pred cceeeccccc-Cc
Q 012224 144 LVKINLQSNG-LT 155 (468)
Q Consensus 144 L~~L~Ls~N~-l~ 155 (468)
|++|+|+++. ++
T Consensus 141 L~~L~L~~c~~It 153 (176)
T 3e4g_A 141 LKYLFLSDLPGVK 153 (176)
T ss_dssp CCEEEEESCTTCC
T ss_pred CCEEECCCCCCCC
Confidence 9999999985 44
No 410
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.99 E-value=0.001 Score=54.85 Aligned_cols=9 Identities=11% Similarity=0.294 Sum_probs=4.1
Q ss_pred EEecCCCCc
Q 012224 75 INISGSSLK 83 (468)
Q Consensus 75 L~L~~n~l~ 83 (468)
++.++++|+
T Consensus 13 v~Cs~~~L~ 21 (130)
T 3rfe_A 13 VDCGRRGLT 21 (130)
T ss_dssp EECCSSCCC
T ss_pred EEeCCCCCc
Confidence 444444444
No 411
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.92 E-value=0.0017 Score=53.47 Aligned_cols=57 Identities=21% Similarity=0.159 Sum_probs=42.2
Q ss_pred CEEEccCcccc-ccCChhhcCCCCCCEEEccCCCCCCCCCcCCCCCcccceeecccccCc
Q 012224 97 QELILHGNNLI-GIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLT 155 (468)
Q Consensus 97 ~~L~Ls~N~l~-g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~ 155 (468)
..++.+++.++ ..+|..+. ++|+.|||++|+|+..-+..|..+++|+.|+|++|.+.
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CEEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 36788888886 45665433 46889999999988444445677888999999988775
No 412
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.86 E-value=0.00024 Score=62.90 Aligned_cols=110 Identities=12% Similarity=0.108 Sum_probs=74.5
Q ss_pred CCCEEEEEecCC-CCccc----CCccccCCCCCCEEEccCcccccc----CChhhcCCCCCCEEEccCCCCCCC----CC
Q 012224 69 RDRVLKINISGS-SLKGF----LAPELGLLTYLQELILHGNNLIGI----IPKELGLLKRLKILDLGTNQLTGP----IP 135 (468)
Q Consensus 69 ~~~v~~L~L~~n-~l~g~----~p~~l~~l~~L~~L~Ls~N~l~g~----ip~~~~~l~~L~~L~Ls~N~l~g~----iP 135 (468)
...++.|+|++| .+... +-..+..-+.|+.|+|++|.+... +-..+..-+.|+.|+|+.|+|... |-
T Consensus 40 n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala 119 (197)
T 1pgv_A 40 DTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLL 119 (197)
T ss_dssp CSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHH
T ss_pred CCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHH
Confidence 457889999885 76532 344566678899999999998743 344555668899999999998732 22
Q ss_pred cCCCCCcccceeecccc---cCcc----cCChhccCCCCCcEEeccCCCC
Q 012224 136 PEIGNLTGLVKINLQSN---GLTG----RLPAELGNLISLEELHLDRNRL 178 (468)
Q Consensus 136 ~~~~~l~~L~~L~Ls~N---~l~g----~~p~~l~~l~~L~~L~ls~N~l 178 (468)
..+..-+.|+.|+|++| .+.. .+-..+..-+.|+.|+++.|..
T Consensus 120 ~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 120 RSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp HHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred HHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCc
Confidence 23455567899999865 3332 1334455557888888887654
No 413
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=96.77 E-value=0.0013 Score=62.08 Aligned_cols=75 Identities=17% Similarity=0.228 Sum_probs=57.7
Q ss_pred hHhccCCceEEEEEEECCCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCC---CccceeeEEEcCCCCcEEEEEE
Q 012224 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHE---NTGKLLGYCRESSPFTRMLVFD 440 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~---nlv~l~g~~~~~~~~~~~lv~e 440 (468)
+.++.|.++.||+....+|..++||+...... .....|.+|.+.|+.++|. .+.+++++. ..++|||
T Consensus 21 ~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~----~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~------~~~lvme 90 (288)
T 3d1u_A 21 AERGHSHRWHLYRVELADGTPLFVKALPDDAP----ALDGLFRAEALGLDWLGRSFGSPVPQVAGWD------DRTLAME 90 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEECCTTCC----CCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE------TTEEEEE
T ss_pred eeeCCcchhheEEEEeCCCCeEEEEecCCCCc----chhHHHHHHHHHHHHHHhcCCCCcCeEEEec------CcEEEEE
Confidence 46899999999999999999999998632211 1124689999999999876 466777653 2589999
Q ss_pred ecCCCChh
Q 012224 441 YASNGTLY 448 (468)
Q Consensus 441 y~~~GsL~ 448 (468)
|++++.+.
T Consensus 91 ~l~g~~~~ 98 (288)
T 3d1u_A 91 WVDERPPT 98 (288)
T ss_dssp CCCCCCCC
T ss_pred ecccCCCC
Confidence 99998753
No 414
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=96.63 E-value=0.003 Score=57.95 Aligned_cols=73 Identities=18% Similarity=0.180 Sum_probs=54.9
Q ss_pred ccCCceEEEEEEECCCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCc-c-ceeeEEEcCCCCcEEEEEEecCC
Q 012224 367 GSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENT-G-KLLGYCRESSPFTRMLVFDYASN 444 (468)
Q Consensus 367 g~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nl-v-~l~g~~~~~~~~~~~lv~ey~~~ 444 (468)
+.|..+.||+....+|..+++|...... ...+.+|++++..+++.++ | +++++....+ ..++||||+++
T Consensus 29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~~-------~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~--~~~~v~e~i~G 99 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQGRPVLFVKTDLSGA-------LNELQDEAARLSWLATTGVPCAAVLDVVTEAG--RDWLLLGEVPG 99 (264)
T ss_dssp CTTSSCEEEEEECTTSCCEEEEEECSCT-------TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSS--CEEEEEECCSS
T ss_pred cCCCCceEEEEecCCCCeEEEEeCCccc-------chhhhHHHHHHHHHHhCCCCCCeEEEeccCCC--CCEEEEEecCC
Confidence 3555699999988778889999863221 1357788999988865565 4 4888877655 68999999999
Q ss_pred CChh
Q 012224 445 GTLY 448 (468)
Q Consensus 445 GsL~ 448 (468)
.++.
T Consensus 100 ~~l~ 103 (264)
T 1nd4_A 100 QDLL 103 (264)
T ss_dssp EETT
T ss_pred cccC
Confidence 8885
No 415
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=96.48 E-value=0.0046 Score=57.06 Aligned_cols=81 Identities=14% Similarity=0.037 Sum_probs=61.4
Q ss_pred hHhccCCceEEEEEEECCCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCC-CCCccceeeEEEcCCCCcEEEEEEec
Q 012224 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFTRMLVFDYA 442 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~-H~nlv~l~g~~~~~~~~~~~lv~ey~ 442 (468)
...+.|+.+.||+.... |..+++|........ ....+.+|.+++..++ |..+.++++++...+ ..++||||+
T Consensus 20 ~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~----~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~--~~~lv~e~i 92 (263)
T 3tm0_A 20 KDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKG----TTYDVEREKDMMLWLEGKLPVPKVLHFERHDG--WSNLLMSEA 92 (263)
T ss_dssp ECCSCCSSSEEEEEECS-SCEEEEEEECGGGTT----STTCHHHHHHHHHHHTTTSCCCCEEEEEEETT--EEEEEEECC
T ss_pred eeccCCCCCeEEEEECC-CCcEEEEeCCcccCC----CHHHHHHHHHHHHHHhcCCCCCeEEEEEecCC--ceEEEEEec
Confidence 45677888899999764 678999987432111 1235888999998884 667778999888765 789999999
Q ss_pred CCCChhhhh
Q 012224 443 SNGTLYEHL 451 (468)
Q Consensus 443 ~~GsL~~~L 451 (468)
++.+|.+.+
T Consensus 93 ~G~~l~~~~ 101 (263)
T 3tm0_A 93 DGVLCSEEY 101 (263)
T ss_dssp SSEEHHHHC
T ss_pred CCeehhhcc
Confidence 999998764
No 416
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.10 E-value=0.0026 Score=56.22 Aligned_cols=90 Identities=19% Similarity=0.104 Sum_probs=65.1
Q ss_pred ccccCCCCCCEEEccCc-ccccc----CChhhcCCCCCCEEEccCCCCCCC----CCcCCCCCcccceeecccccCccc-
Q 012224 88 PELGLLTYLQELILHGN-NLIGI----IPKELGLLKRLKILDLGTNQLTGP----IPPEIGNLTGLVKINLQSNGLTGR- 157 (468)
Q Consensus 88 ~~l~~l~~L~~L~Ls~N-~l~g~----ip~~~~~l~~L~~L~Ls~N~l~g~----iP~~~~~l~~L~~L~Ls~N~l~g~- 157 (468)
..+.+-+.|++|+|++| .+... +-..+..-+.|+.|+|++|+|... |-..+..-+.|+.|+|+.|.|...
T Consensus 35 ~ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~G 114 (197)
T 1pgv_A 35 RLREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPEL 114 (197)
T ss_dssp HHHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHH
T ss_pred HHHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHH
Confidence 34556788999999986 77532 445667778999999999998732 223344557899999999999842
Q ss_pred ---CChhccCCCCCcEEeccCCC
Q 012224 158 ---LPAELGNLISLEELHLDRNR 177 (468)
Q Consensus 158 ---~p~~l~~l~~L~~L~ls~N~ 177 (468)
+-..+..-+.|++|+|++|.
T Consensus 115 a~ala~aL~~N~tL~~L~L~n~~ 137 (197)
T 1pgv_A 115 LARLLRSTLVTQSIVEFKADNQR 137 (197)
T ss_dssp HHHHHHHTTTTCCCSEEECCCCS
T ss_pred HHHHHHHHhhCCceeEEECCCCc
Confidence 33455556789999998653
No 417
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=95.82 E-value=0.032 Score=54.86 Aligned_cols=83 Identities=14% Similarity=0.226 Sum_probs=44.5
Q ss_pred cccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCCC-cCCCCCcccceeecccccCcccCChhccCCCC
Q 012224 89 ELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIP-PEIGNLTGLVKINLQSNGLTGRLPAELGNLIS 167 (468)
Q Consensus 89 ~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP-~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~ 167 (468)
.+..+..|+.+.+.++... .-...|.++++|+.+++. +.++ .|+ ..|.++.+|+.++|..+ ++..-...|.+|.+
T Consensus 260 aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~-~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~ 335 (394)
T 4gt6_A 260 AFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRIT-ELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQ 335 (394)
T ss_dssp TTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCC-EECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTT
T ss_pred eeeecccccEEecccccce-ecCcccccccccccccCC-Cccc-ccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCC
Confidence 3455566666666544332 223456666666666664 3343 233 34556666666666543 33222345566666
Q ss_pred CcEEeccC
Q 012224 168 LEELHLDR 175 (468)
Q Consensus 168 L~~L~ls~ 175 (468)
|+.+.+..
T Consensus 336 L~~i~ip~ 343 (394)
T 4gt6_A 336 LERIAIPS 343 (394)
T ss_dssp CCEEEECT
T ss_pred CCEEEECc
Confidence 66666643
No 418
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=95.47 E-value=0.035 Score=54.18 Aligned_cols=102 Identities=17% Similarity=0.198 Sum_probs=63.8
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCCC-cCCCCCcccceeec
Q 012224 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIP-PEIGNLTGLVKINL 149 (468)
Q Consensus 71 ~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP-~~~~~l~~L~~L~L 149 (468)
.+..+.+..+ +...-...+..+..|+.+.+..+ ++..-...|.++.+|+.+++..+ +. .++ ..|.++.+|+.+.+
T Consensus 218 ~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~-~i~~~aF~~c~~L~~i~l 293 (379)
T 4h09_A 218 NLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VK-TVPYLLCSGCSNLTKVVM 293 (379)
T ss_dssp SCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CS-EECTTTTTTCTTCCEEEE
T ss_pred ccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ce-eccccccccccccccccc
Confidence 3455555433 33333345667777888887765 44344456777788888887554 44 233 35667788888888
Q ss_pred ccccCcccCChhccCCCCCcEEeccCC
Q 012224 150 QSNGLTGRLPAELGNLISLEELHLDRN 176 (468)
Q Consensus 150 s~N~l~g~~p~~l~~l~~L~~L~ls~N 176 (468)
.++.++..-...|.+|.+|+.+.|..+
T Consensus 294 ~~~~i~~I~~~aF~~c~~L~~i~lp~~ 320 (379)
T 4h09_A 294 DNSAIETLEPRVFMDCVKLSSVTLPTA 320 (379)
T ss_dssp CCTTCCEECTTTTTTCTTCCEEECCTT
T ss_pred cccccceehhhhhcCCCCCCEEEcCcc
Confidence 777776333456777788888877644
No 419
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=95.38 E-value=0.078 Score=51.63 Aligned_cols=94 Identities=13% Similarity=0.102 Sum_probs=68.8
Q ss_pred CccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCCCcCCCCCcccceeecccccCcccCChhccCCC
Q 012224 87 APELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLI 166 (468)
Q Consensus 87 p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~ 166 (468)
...+.....|+.+.+..+ +...-...+.++.+|+.+.+..+ ++..-...+.++.+|+.+.+..+ +...-...|..++
T Consensus 210 ~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~ 286 (379)
T 4h09_A 210 AYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCS 286 (379)
T ss_dssp TTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCT
T ss_pred ecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceecccccccccc
Confidence 345667888999998765 44344567889999999999876 55233356778899999999654 4423345678899
Q ss_pred CCcEEeccCCCCCccCCC
Q 012224 167 SLEELHLDRNRLQGAVPA 184 (468)
Q Consensus 167 ~L~~L~ls~N~l~g~ip~ 184 (468)
+|+.+.+.++.++ .|+.
T Consensus 287 ~L~~i~l~~~~i~-~I~~ 303 (379)
T 4h09_A 287 NLTKVVMDNSAIE-TLEP 303 (379)
T ss_dssp TCCEEEECCTTCC-EECT
T ss_pred ccccccccccccc-eehh
Confidence 9999999988776 5554
No 420
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=95.20 E-value=0.03 Score=55.02 Aligned_cols=104 Identities=13% Similarity=0.163 Sum_probs=74.9
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCCCcCCCCCcccceeecc
Q 012224 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (468)
Q Consensus 71 ~v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~Ls 150 (468)
.++.+.+.++.. ..-...+.+++.|+.+++. +.++..-...|.++.+|+.++|..+ ++-.-...|.++.+|+.+.|.
T Consensus 266 ~L~~i~lp~~~~-~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip 342 (394)
T 4gt6_A 266 YLASVKMPDSVV-SIGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIP 342 (394)
T ss_dssp SCCEEECCTTCC-EECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEC
T ss_pred cccEEecccccc-eecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEEC
Confidence 567777765433 2233467888999999996 4555444567899999999999865 552223568889999999997
Q ss_pred cccCcccCChhccCCCCCcEEeccCCCC
Q 012224 151 SNGLTGRLPAELGNLISLEELHLDRNRL 178 (468)
Q Consensus 151 ~N~l~g~~p~~l~~l~~L~~L~ls~N~l 178 (468)
.+ ++-.-...|.+|++|+.+++.+|..
T Consensus 343 ~s-v~~I~~~aF~~C~~L~~i~~~~~~~ 369 (394)
T 4gt6_A 343 SS-VTKIPESAFSNCTALNNIEYSGSRS 369 (394)
T ss_dssp TT-CCBCCGGGGTTCTTCCEEEESSCHH
T ss_pred cc-cCEEhHhHhhCCCCCCEEEECCcee
Confidence 55 6523346788999999999988754
No 421
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=95.08 E-value=0.032 Score=54.85 Aligned_cols=85 Identities=19% Similarity=0.130 Sum_probs=64.5
Q ss_pred ccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCC-CcCCCCCcccceeecccccCcccCChhccCCC
Q 012224 88 PELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPI-PPEIGNLTGLVKINLQSNGLTGRLPAELGNLI 166 (468)
Q Consensus 88 ~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~i-P~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~ 166 (468)
..+..+.+|+.+.+.++ +...-...|.++++|+.++|..+ ++ .| ...|.++.+|+.++|..| ++..-...|.+|.
T Consensus 291 ~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~ 366 (394)
T 4fs7_A 291 KTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VE-EIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCI 366 (394)
T ss_dssp TTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CC-EECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCT
T ss_pred ccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-cc-EEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCC
Confidence 35677889999999765 55444567889999999999754 55 34 356888999999999877 6633456788899
Q ss_pred CCcEEeccCC
Q 012224 167 SLEELHLDRN 176 (468)
Q Consensus 167 ~L~~L~ls~N 176 (468)
+|+.+++..+
T Consensus 367 ~L~~i~lp~~ 376 (394)
T 4fs7_A 367 NLKKVELPKR 376 (394)
T ss_dssp TCCEEEEEGG
T ss_pred CCCEEEECCC
Confidence 9999998765
No 422
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=94.46 E-value=0.056 Score=53.08 Aligned_cols=105 Identities=17% Similarity=0.104 Sum_probs=73.0
Q ss_pred EEEEEecCCCCcccCCccccCCCCCCEEEccCccccccCChhhcCCCCCCEEEccCCCCCCCC-CcCCCCCcccceeecc
Q 012224 72 VLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPI-PPEIGNLTGLVKINLQ 150 (468)
Q Consensus 72 v~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~i-P~~~~~l~~L~~L~Ls 150 (468)
++.+.+..+.. ..-...+..+..++.+.+..+.+. ...|..+.+|+.+.+..+ ++ .| ...|.++.+|+.++|.
T Consensus 255 l~~~~~~~~~~-~i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~-i~-~I~~~aF~~c~~L~~i~lp 328 (394)
T 4fs7_A 255 LESISIQNNKL-RIGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS-VK-FIGEEAFESCTSLVSIDLP 328 (394)
T ss_dssp CCEEEECCTTC-EECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-CC-EECTTTTTTCTTCCEECCC
T ss_pred ceeEEcCCCcc-eeeccccccccccceeccCceeec---cccccccccccccccccc-cc-eechhhhcCCCCCCEEEeC
Confidence 44444444322 223345778888998888776533 246889999999999765 55 34 3568899999999997
Q ss_pred cccCcccCChhccCCCCCcEEeccCCCCCccCCCC
Q 012224 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAG 185 (468)
Q Consensus 151 ~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~ip~~ 185 (468)
.+ ++..-...|.+|.+|+.+++..| ++ .|+..
T Consensus 329 ~~-v~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~ 360 (394)
T 4fs7_A 329 YL-VEEIGKRSFRGCTSLSNINFPLS-LR-KIGAN 360 (394)
T ss_dssp TT-CCEECTTTTTTCTTCCEECCCTT-CC-EECTT
T ss_pred Cc-ccEEhHHhccCCCCCCEEEECcc-cc-EehHH
Confidence 54 66333567889999999999876 54 56553
No 423
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=94.21 E-value=0.055 Score=34.63 Aligned_cols=30 Identities=17% Similarity=0.175 Sum_probs=17.1
Q ss_pred hhhhhhhHHHHHHHHHHHHHhhhheeecCC
Q 012224 291 LLTLEIVTGTMVGVLFLVAGFTGLQRCKSK 320 (468)
Q Consensus 291 ii~~~vv~g~vv~v~~~i~~~~~~rr~~~~ 320 (468)
.++.++++|+++.++++...++++|||+.+
T Consensus 11 aIA~gVVgGv~~v~ii~~~~~~~~RRRr~~ 40 (44)
T 2l2t_A 11 LIAAGVIGGLFILVIVGLTFAVYVRRKSIK 40 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCSS
T ss_pred eEEEeehHHHHHHHHHHHHHHHHhhhhhhh
Confidence 355566666666555555555555555444
No 424
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=94.18 E-value=0.044 Score=35.17 Aligned_cols=29 Identities=7% Similarity=-0.020 Sum_probs=16.8
Q ss_pred hhhhhhHHHHHHHHHHHHHhhhheeecCC
Q 012224 292 LTLEIVTGTMVGVLFLVAGFTGLQRCKSK 320 (468)
Q Consensus 292 i~~~vv~g~vv~v~~~i~~~~~~rr~~~~ 320 (468)
+++++++|+++++++++..++++|||+.+
T Consensus 13 IA~gVVgGv~~~~ii~~~~~~~~RRr~~~ 41 (44)
T 2ks1_B 13 IATGMVGALLLLLVVALGIGLFMRRRHIV 41 (44)
T ss_dssp STHHHHHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred EEeehhHHHHHHHHHHHHHHHHhhhhHhh
Confidence 45466766666655555555555555444
No 425
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=94.06 E-value=0.057 Score=52.21 Aligned_cols=81 Identities=11% Similarity=0.149 Sum_probs=54.8
Q ss_pred hHhccCCceEEEEEEECCCCeEEEEEEe--ecccccchhhHHHHHHHHHHHhcCC--CCCccceeeEEEcCCC-CcEEEE
Q 012224 364 NIIGSSPDSLVYKGTMKGGPEIAVISLC--IKEEHWTGYLELYFQREVADLARIN--HENTGKLLGYCRESSP-FTRMLV 438 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~~g~~vavK~l~--~~~~~~~~~~~~~f~~e~~~l~~l~--H~nlv~l~g~~~~~~~-~~~~lv 438 (468)
+.++.|.++.||+....+ ..+++|+.. ..... .....+.+|.+++..++ +..+.+++++|.+.+. ...++|
T Consensus 44 ~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~---~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~v 119 (359)
T 3dxp_A 44 EQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLL---PSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYI 119 (359)
T ss_dssp EECCC-CCSCEEEEECSS-CEEEEECCCC-------------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEE
T ss_pred EEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCC---CcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEE
Confidence 457899999999998765 567888764 22111 12346788999998887 4557788888876521 147899
Q ss_pred EEecCCCChh
Q 012224 439 FDYASNGTLY 448 (468)
Q Consensus 439 ~ey~~~GsL~ 448 (468)
|||+++..+.
T Consensus 120 me~v~G~~l~ 129 (359)
T 3dxp_A 120 MEFVSGRVLW 129 (359)
T ss_dssp EECCCCBCCC
T ss_pred EEecCCeecC
Confidence 9999988774
No 426
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=93.35 E-value=0.089 Score=49.15 Aligned_cols=76 Identities=16% Similarity=0.152 Sum_probs=50.9
Q ss_pred hHhccCCceEEEEEEECCCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCC-CccceeeEEEcCCCCcEEEEEEec
Q 012224 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHE-NTGKLLGYCRESSPFTRMLVFDYA 442 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~-nlv~l~g~~~~~~~~~~~lv~ey~ 442 (468)
..+|.|..+.||+.++.+|+.+.||+...... .....|..|.+.|..+.-. .+.-..-++.. ..++|+||+
T Consensus 21 ~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~----~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~l 92 (288)
T 3f7w_A 21 AERGHSHRWHLYRVELADGTPLFVKALPDDAP----ALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWV 92 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEECCTTCC----CCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECC
T ss_pred EecCCCCCeEEEEEEECCCCEEEEEEeCCCCc----chhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEee
Confidence 45789999999999999999999997632221 1123578898888877422 22212223333 247899999
Q ss_pred CCCCh
Q 012224 443 SNGTL 447 (468)
Q Consensus 443 ~~GsL 447 (468)
+.+..
T Consensus 93 ~~~~~ 97 (288)
T 3f7w_A 93 DERPP 97 (288)
T ss_dssp CCCCC
T ss_pred cccCC
Confidence 87754
No 427
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=91.63 E-value=0.38 Score=44.08 Aligned_cols=78 Identities=13% Similarity=0.081 Sum_probs=55.5
Q ss_pred HhccCCce-EEEEEEEC-CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCC-CCCccceeeEEEcCCCCcEEEEEEe
Q 012224 365 IIGSSPDS-LVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFTRMLVFDY 441 (468)
Q Consensus 365 ~lg~G~~g-~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~-H~nlv~l~g~~~~~~~~~~~lv~ey 441 (468)
.+..|..| .||+.... ++..++||+-... ...++.+|.+.|..+. +--+-++++++.+.+ ..++||||
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~-------~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~--~~~lvme~ 101 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS-------VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPD--DAWLLTTA 101 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH-------HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETT--EEEEEEEC
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC-------CHhHHHHHHHHHHHhccCCCcCeEEEEEEECC--eEEEEEEe
Confidence 34456555 68988765 5677888875321 2456888998888774 333557888888766 78999999
Q ss_pred cCCCChhhhh
Q 012224 442 ASNGTLYEHL 451 (468)
Q Consensus 442 ~~~GsL~~~L 451 (468)
+++.++.+..
T Consensus 102 l~G~~~~~~~ 111 (272)
T 4gkh_A 102 IPGKTAFQVL 111 (272)
T ss_dssp CCSEEHHHHH
T ss_pred eCCccccccc
Confidence 9998877654
No 428
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=90.75 E-value=0.47 Score=44.98 Aligned_cols=74 Identities=12% Similarity=0.042 Sum_probs=55.6
Q ss_pred hHhccCCceEEEEEEECCCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCC---CCCccceeeEEEcCCCCcEEEEEE
Q 012224 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN---HENTGKLLGYCRESSPFTRMLVFD 440 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~---H~nlv~l~g~~~~~~~~~~~lv~e 440 (468)
..|+.|.+..+|+... ++..++||+.... ....|..|.+.|..++ ...+.+.++++...+ ..++|||
T Consensus 42 ~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~-------~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g--~~~lvme 111 (312)
T 3jr1_A 42 EKLYSGEMNEIWLIND-EVQTVFVKINERS-------YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQG--HSFLLLE 111 (312)
T ss_dssp EEECCSSSSEEEEEES-SSCEEEEEEEEGG-------GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSS--EEEEEEE
T ss_pred EEeCCccceeeeEEEE-CCCeEEEEeCCcc-------cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCC--ceEEEEE
Confidence 3578888999999886 4667888876321 2456888988888773 356778888887655 7899999
Q ss_pred ecCCCCh
Q 012224 441 YASNGTL 447 (468)
Q Consensus 441 y~~~GsL 447 (468)
|+++..+
T Consensus 112 ~l~G~~~ 118 (312)
T 3jr1_A 112 ALNKSKN 118 (312)
T ss_dssp CCCCCCC
T ss_pred eccCCCC
Confidence 9998865
No 429
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=88.68 E-value=0.44 Score=46.59 Aligned_cols=78 Identities=10% Similarity=-0.030 Sum_probs=46.7
Q ss_pred hHhccCCceEEEEEEEC-CCCeEEEEEEeeccc-ccc--hhhHHHHHHHHHHHhcCCC--CCcc-ceeeEEEcCCCCcEE
Q 012224 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEE-HWT--GYLELYFQREVADLARINH--ENTG-KLLGYCRESSPFTRM 436 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~-~g~~vavK~l~~~~~-~~~--~~~~~~f~~e~~~l~~l~H--~nlv-~l~g~~~~~~~~~~~ 436 (468)
+.+|.|.++.||++... ++..++||....... ... ......+..|.+++..+++ +..+ +++.+ . .+ ..+
T Consensus 36 ~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~-d-~~--~~~ 111 (397)
T 2olc_A 36 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS-D-TE--MAV 111 (397)
T ss_dssp EECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE-E-TT--TTE
T ss_pred EECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE-c-CC--ccE
Confidence 46899999999999765 568899997643211 000 0112345678888877632 3444 34433 2 33 468
Q ss_pred EEEEecCCC
Q 012224 437 LVFDYASNG 445 (468)
Q Consensus 437 lv~ey~~~G 445 (468)
+||||+++.
T Consensus 112 lvmE~l~g~ 120 (397)
T 2olc_A 112 TVMEDLSHL 120 (397)
T ss_dssp EEECCCTTS
T ss_pred EEEEeCCCc
Confidence 999999864
No 430
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=86.94 E-value=0.57 Score=29.89 Aligned_cols=24 Identities=25% Similarity=0.186 Sum_probs=10.4
Q ss_pred hHHHHHHHHHHHHHhhhheeecCC
Q 012224 297 VTGTMVGVLFLVAGFTGLQRCKSK 320 (468)
Q Consensus 297 v~g~vv~v~~~i~~~~~~rr~~~~ 320 (468)
++|++++++++++.+++.|||+.+
T Consensus 18 vVGvll~vi~~l~~~~~~RRR~~~ 41 (44)
T 2jwa_A 18 VVGILLVVVLGVVFGILIKRRQQK 41 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCSC
T ss_pred HHHHHHHHHHHHHHHhheehhhhh
Confidence 334444444444444444544433
No 431
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=85.83 E-value=0.097 Score=52.72 Aligned_cols=61 Identities=7% Similarity=-0.110 Sum_probs=17.0
Q ss_pred hHhccCCceEEEEEEECC-CCeEEE------EEEeecccccchhhHHHHHHHHHHHhcCCCCCccceeeEEEc
Q 012224 364 NIIGSSPDSLVYKGTMKG-GPEIAV------ISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRE 429 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~~-g~~vav------K~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv~l~g~~~~ 429 (468)
+.+| ||.||+|.+.. ...||| |..... .......++|.+|..++.+.+|+|+++..++...
T Consensus 148 ~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~--~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 148 EHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQD--GVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp TTSS---BCCC---------CCBGGGC-------------------------------------CBCCCEEEE
T ss_pred ccCC---chhhhcccccccCCchhhhhccCccccccc--cccccccccccccccccccccccccCCCcceEEe
Confidence 4455 99999999864 467888 665322 1222334578999999999999999999888753
No 432
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=85.14 E-value=1.5 Score=41.41 Aligned_cols=70 Identities=13% Similarity=0.096 Sum_probs=49.1
Q ss_pred hHhccCCceEEEEEEECCCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCC---CC-ccceeeEEEcCCCCcEEEEE
Q 012224 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINH---EN-TGKLLGYCRESSPFTRMLVF 439 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H---~n-lv~l~g~~~~~~~~~~~lv~ 439 (468)
..++.|....||+. |..+++|..... .....+.+|.+++..+++ .- +.+++++ + ..++||
T Consensus 43 ~~l~~G~~n~vy~v----g~~~vlR~~~~~------~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~--~~~lvm 106 (320)
T 3r70_A 43 RYLSSGDDSDTFLC----NEQYVVKVPKRD------SVRISQKRELELYRFLENCKLSYQIPAVVYQ----S--DRFNIM 106 (320)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESSH------HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----C--SSCEEE
T ss_pred EeCCCCCCceEEEE----CCEEEEEeCCcH------HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----C--CcEEEE
Confidence 56789999999998 667888875211 123458899998888866 12 2334433 2 468999
Q ss_pred EecCCCChhh
Q 012224 440 DYASNGTLYE 449 (468)
Q Consensus 440 ey~~~GsL~~ 449 (468)
||+++.++.+
T Consensus 107 e~i~G~~l~~ 116 (320)
T 3r70_A 107 KYIKGERITY 116 (320)
T ss_dssp ECCCCBCCCH
T ss_pred eecCCccccc
Confidence 9999998863
No 433
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=83.48 E-value=1.3 Score=27.37 Aligned_cols=14 Identities=21% Similarity=0.648 Sum_probs=6.6
Q ss_pred hhhHHHHHHHHHHH
Q 012224 295 EIVTGTMVGVLFLV 308 (468)
Q Consensus 295 ~vv~g~vv~v~~~i 308 (468)
+++++.++++.++.
T Consensus 15 GiVvG~v~gv~li~ 28 (38)
T 2k1k_A 15 AVIFGLLLGAALLL 28 (38)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred eeehHHHHHHHHHH
Confidence 45555554444333
No 434
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=82.08 E-value=3.1 Score=40.08 Aligned_cols=74 Identities=12% Similarity=0.010 Sum_probs=53.2
Q ss_pred hHhccCCceEEEEEEECCCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCC--ccceeeEEEcCCCCcEEEEEEe
Q 012224 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHEN--TGKLLGYCRESSPFTRMLVFDY 441 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~n--lv~l~g~~~~~~~~~~~lv~ey 441 (468)
..++.|....+|+... +|..+++|.... . ..+..|..++..+.... +.++++++...+ ...++||||
T Consensus 47 ~~l~gG~~n~~y~v~~-~g~~~vlK~~~~---~------~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~-g~~~lv~e~ 115 (362)
T 3ovc_A 47 MQLSEGEESRAFSFDV-GGRGYVLRVNSC---A------DGFYKDRYVYRHFASAALPIPEVLDIGEFSE-SLTYCISRR 115 (362)
T ss_dssp EEEEECSSEEEEEEEE-TTEEEEEEEESC---C------HHHHHHHHHHHHHCCSSSCCCCEEEEEESSS-SCEEEEEEC
T ss_pred EECCCCCcceEEEEEE-CCcEEEEEeCCc---h------hhHHHHHHHHHHHHhcCCCCceEEEeccCCC-CCeEEEEEe
Confidence 4578899999999886 577788887521 1 25788888888876544 346677776542 258999999
Q ss_pred cCCCChh
Q 012224 442 ASNGTLY 448 (468)
Q Consensus 442 ~~~GsL~ 448 (468)
+++..+.
T Consensus 116 l~G~~l~ 122 (362)
T 3ovc_A 116 AQGVTLQ 122 (362)
T ss_dssp CCSEETT
T ss_pred cCCCCcc
Confidence 9987664
No 435
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=80.16 E-value=4.5 Score=37.74 Aligned_cols=75 Identities=9% Similarity=-0.059 Sum_probs=52.7
Q ss_pred hHhccCCceEEEEEEECCCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCC---CccceeeEEEcCCCCcEEEEEE
Q 012224 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHE---NTGKLLGYCRESSPFTRMLVFD 440 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~---nlv~l~g~~~~~~~~~~~lv~e 440 (468)
..++.|....||+. |..++||.-. . ......+.+|.++|..+++. .+.+.+.++.... ...++|||
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~--~----~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~-g~~~~v~e 93 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPK--S----QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSD-GNPFVGYR 93 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEES--S----HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTT-SCEEEEEE
T ss_pred eecCCCcceeEEEE----CCEEEEEecC--C----chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCC-CceEEEEe
Confidence 34678888899988 5668888741 1 12345788999999998753 2446666665322 25789999
Q ss_pred ecCCCChhh
Q 012224 441 YASNGTLYE 449 (468)
Q Consensus 441 y~~~GsL~~ 449 (468)
|+++..+.+
T Consensus 94 ~i~G~~l~~ 102 (306)
T 3tdw_A 94 KVQGQILGE 102 (306)
T ss_dssp CCCSEECHH
T ss_pred ccCCeECch
Confidence 999988876
No 436
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=75.86 E-value=2.4 Score=26.49 Aligned_cols=11 Identities=9% Similarity=0.280 Sum_probs=5.0
Q ss_pred hhhhhhHHHHH
Q 012224 292 LTLEIVTGTMV 302 (468)
Q Consensus 292 i~~~vv~g~vv 302 (468)
++.++++|+++
T Consensus 15 I~~~vv~Gv~l 25 (41)
T 2k9y_A 15 VIGGVAVGVVL 25 (41)
T ss_dssp HHHHHHHHHHH
T ss_pred EEeehhHHHHH
Confidence 33344544444
No 437
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=74.72 E-value=2.1 Score=40.84 Aligned_cols=85 Identities=7% Similarity=-0.034 Sum_probs=52.5
Q ss_pred Hh-ccCCceEEEEEEEC-------CCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCC---CCccceeeEEEcCCC-
Q 012224 365 II-GSSPDSLVYKGTMK-------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINH---ENTGKLLGYCRESSP- 432 (468)
Q Consensus 365 ~l-g~G~~g~vy~~~~~-------~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H---~nlv~l~g~~~~~~~- 432 (468)
.| +.|....+|+.... ++..+++|....... ........+.+|.+++..++. -.+.++++++.+.+.
T Consensus 27 ~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~-~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 27 GVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAED-VPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGG-CCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred ECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCc-cccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 46 77888999998765 256788887532210 000001346677777777642 245677777765420
Q ss_pred CcEEEEEEecCCCChhhh
Q 012224 433 FTRMLVFDYASNGTLYEH 450 (468)
Q Consensus 433 ~~~~lv~ey~~~GsL~~~ 450 (468)
...++||||+++..+.+.
T Consensus 106 g~~~~v~e~l~G~~l~~~ 123 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPPDV 123 (357)
T ss_dssp SSCEEEEECCCCBCCCBT
T ss_pred CCceEEEEecCCCChhhc
Confidence 136899999998777653
No 438
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=73.10 E-value=4.3 Score=27.03 Aligned_cols=24 Identities=25% Similarity=0.657 Sum_probs=15.1
Q ss_pred ccchhhhhhhHHHHHHHHHHHHHh
Q 012224 288 PAWLLTLEIVTGTMVGVLFLVAGF 311 (468)
Q Consensus 288 ~~~ii~~~vv~g~vv~v~~~i~~~ 311 (468)
+.|++++++++|..+..+++.+++
T Consensus 8 p~WiIi~svl~GLLLL~Lii~~Lw 31 (54)
T 2l8s_A 8 PLWVILLSAFAGLLLLMLLILALW 31 (54)
T ss_dssp CTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHH
Confidence 568777777777666555544443
No 439
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=65.07 E-value=6.7 Score=36.33 Aligned_cols=76 Identities=16% Similarity=0.030 Sum_probs=48.6
Q ss_pred hHhccCCceEEEEEEECCCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCC-CCCc--cceeeEEEcCCC-CcEEEEE
Q 012224 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENT--GKLLGYCRESSP-FTRMLVF 439 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~-H~nl--v~l~g~~~~~~~-~~~~lv~ 439 (468)
+.++.|....||+.. ..+++|..... .....+.+|.+++..+. |..+ .+.++++...+. ...++||
T Consensus 26 ~~~~~G~~n~v~~v~----~~~vlR~~~~~------~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm 95 (304)
T 3sg8_A 26 EISGEGNDCIAYEIN----RDFIFKFPKHS------RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGF 95 (304)
T ss_dssp CEEEECSSEEEEEST----TSEEEEEESSH------HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEE
T ss_pred EecCCCCcceEEEEC----CEEEEEecCCc------chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEE
Confidence 357889999999863 45788875211 23457889999998873 4333 233333322210 1247899
Q ss_pred EecCCCChhh
Q 012224 440 DYASNGTLYE 449 (468)
Q Consensus 440 ey~~~GsL~~ 449 (468)
||+++..+.+
T Consensus 96 ~~i~G~~l~~ 105 (304)
T 3sg8_A 96 TKIKGVPLTP 105 (304)
T ss_dssp ECCCCEECCH
T ss_pred cccCCeECCc
Confidence 9999988865
No 440
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=57.11 E-value=15 Score=34.27 Aligned_cols=72 Identities=17% Similarity=0.212 Sum_probs=37.5
Q ss_pred HhccCCceEEEEEEECCCCeEEEEEEeecccccchhhHHHHHHHHHHHhc-----CCCCCcccee-e--EEEcCCCCcEE
Q 012224 365 IIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLAR-----INHENTGKLL-G--YCRESSPFTRM 436 (468)
Q Consensus 365 ~lg~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~-----l~H~nlv~l~-g--~~~~~~~~~~~ 436 (468)
.++.|..+.||+....+|. +++|+.... ..+...|.+++.. +..|.++.-. | +....+ ..+
T Consensus 39 ~l~gG~~n~~~~v~~~~~~-~vlk~~~~~--------~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~--~~~ 107 (346)
T 2q83_A 39 VIQGNQMALVWKVHTDSGA-VCLKRIHRP--------EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGS--FLF 107 (346)
T ss_dssp ECC----CEEEEEEETTEE-EEEEEECSC--------HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETT--EEE
T ss_pred eccccccCcEEEEEeCCCC-EEEEecCCC--------HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECC--EEE
Confidence 3555678899999886654 888887421 1122233333332 3334444311 1 112233 578
Q ss_pred EEEEecCCCCh
Q 012224 437 LVFDYASNGTL 447 (468)
Q Consensus 437 lv~ey~~~GsL 447 (468)
+|+||+++..+
T Consensus 108 ~l~~~i~G~~~ 118 (346)
T 2q83_A 108 VVYDWIEGRPF 118 (346)
T ss_dssp EEEECCCCBCC
T ss_pred EEEEeecCccC
Confidence 99999998665
No 441
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=55.19 E-value=22 Score=23.70 Aligned_cols=25 Identities=16% Similarity=0.529 Sum_probs=15.5
Q ss_pred CccchhhhhhhHHHHHHHHHHHHHh
Q 012224 287 RPAWLLTLEIVTGTMVGVLFLVAGF 311 (468)
Q Consensus 287 ~~~~ii~~~vv~g~vv~v~~~i~~~ 311 (468)
.+.|++++++++|..++.+++++++
T Consensus 10 vp~wiIi~svl~GLllL~li~~~Lw 34 (54)
T 2knc_A 10 IPIWWVLVGVLGGLLLLTILVLAMW 34 (54)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHH
Confidence 3568877777777666555544444
No 442
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=54.99 E-value=25 Score=32.54 Aligned_cols=74 Identities=9% Similarity=0.027 Sum_probs=44.5
Q ss_pred hccCCceEEEEEEECCCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCC--ccceeeE-----EEcCCCCcEEEE
Q 012224 366 IGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHEN--TGKLLGY-----CRESSPFTRMLV 438 (468)
Q Consensus 366 lg~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~n--lv~l~g~-----~~~~~~~~~~lv 438 (468)
++ |....||+....+|..+++|....... ....+..|.+++..++... +.+++.. ....+ ..++|
T Consensus 34 l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~-----~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g--~~~~l 105 (328)
T 1zyl_A 34 LN-SYENRVYQFQDEDRRRFVVKFYRPERW-----TADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQG--FYFAV 105 (328)
T ss_dssp EC-CSSSEEEEECCTTCCCEEEEEECTTTS-----CHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETT--EEEEE
T ss_pred ec-CcccceEEEEcCCCCEEEEEEcCCCCC-----CHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECC--EEEEE
Confidence 44 667789998877787899998742211 1335566777666653222 3344433 11122 45789
Q ss_pred EEecCCCCh
Q 012224 439 FDYASNGTL 447 (468)
Q Consensus 439 ~ey~~~GsL 447 (468)
+||+++..+
T Consensus 106 ~~~i~G~~~ 114 (328)
T 1zyl_A 106 FPSVGGRQF 114 (328)
T ss_dssp EECCCCEEC
T ss_pred EEecCCCCC
Confidence 999987554
No 443
>2k1a_A Integrin alpha-IIB; single-PASS transmembrane segment, alternative splicing, calcium, cell adhesion, cleavage on PAIR of basic residues; NMR {Homo sapiens} PDB: 2k9j_A
Probab=50.15 E-value=22 Score=22.27 Aligned_cols=25 Identities=16% Similarity=0.529 Sum_probs=14.9
Q ss_pred CccchhhhhhhHHHHHHHHHHHHHh
Q 012224 287 RPAWLLTLEIVTGTMVGVLFLVAGF 311 (468)
Q Consensus 287 ~~~~ii~~~vv~g~vv~v~~~i~~~ 311 (468)
.+.|++++++++|..+..+++.+++
T Consensus 8 vp~wiIi~s~l~GLllL~li~~~Lw 32 (42)
T 2k1a_A 8 IPIWWVLVGVLGGLLLLTILVLAMW 32 (42)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHH
Confidence 3567777677766665554444433
No 444
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=48.89 E-value=4.8 Score=24.18 Aligned_cols=6 Identities=17% Similarity=0.102 Sum_probs=2.4
Q ss_pred hhheee
Q 012224 312 TGLQRC 317 (468)
Q Consensus 312 ~~~rr~ 317 (468)
++.|||
T Consensus 29 ~~iRRr 34 (35)
T 1iij_A 29 ILIKRR 34 (35)
T ss_dssp HHHHHC
T ss_pred eEEeec
Confidence 344443
No 445
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=41.28 E-value=44 Score=32.37 Aligned_cols=76 Identities=8% Similarity=0.166 Sum_probs=43.4
Q ss_pred hHhccCCceEEEEEEECCCCeEEEEEEeeccc----ccc-hhhHHHHHHHHHHHh-cCCCCCccceeeEEEcCCCCcEEE
Q 012224 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEE----HWT-GYLELYFQREVADLA-RINHENTGKLLGYCRESSPFTRML 437 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~~g~~vavK~l~~~~~----~~~-~~~~~~f~~e~~~l~-~l~H~nlv~l~g~~~~~~~~~~~l 437 (468)
+.+|.|....||+... ++..++||....... .+. ...+..+..|+..+. ...+..+.+++++. .+ ..++
T Consensus 40 ~~l~~G~~n~vyrv~~-~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~--~~~l 114 (420)
T 2pyw_A 40 KEVGDGNLNFVFIVVG-SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RT--MALI 114 (420)
T ss_dssp EECCCSSSCEEEEEEC-SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TT--TTEE
T ss_pred EEccCCCcEEEEEEEc-CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CC--ccEE
Confidence 4578899999999965 567889994322111 100 012334444443332 22233455666554 23 5789
Q ss_pred EEEec-CC
Q 012224 438 VFDYA-SN 444 (468)
Q Consensus 438 v~ey~-~~ 444 (468)
||||+ ++
T Consensus 115 v~e~l~~g 122 (420)
T 2pyw_A 115 GMRYLEPP 122 (420)
T ss_dssp EECCCCTT
T ss_pred EEeecCCc
Confidence 99999 76
No 446
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=40.97 E-value=33 Score=31.56 Aligned_cols=89 Identities=7% Similarity=-0.036 Sum_probs=45.7
Q ss_pred cCHHHHHHHHHhhH-------hHhccCCceEEEEEEECCCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCc--
Q 012224 350 FSRQELEVACEDFS-------NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENT-- 420 (468)
Q Consensus 350 ~~~~el~~at~~~~-------~~lg~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nl-- 420 (468)
++.+++......|. ..|+.|....+|+....+| .+++|...... ....+..|.+++..++...+
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~------~~~~l~~e~~~l~~L~~~g~~v 79 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV------EKNDLPFFLGLMQHLAAKGLSC 79 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC---------CCHHHHHHHHHHHHHHTTCCC
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC------CHHHHHHHHHHHHHHHHCCCCC
Confidence 44455554444332 3456677789999988766 57788764311 11234456666655432222
Q ss_pred cceeeE------EEcCCCCcEEEEEEecCCCCh
Q 012224 421 GKLLGY------CRESSPFTRMLVFDYASNGTL 447 (468)
Q Consensus 421 v~l~g~------~~~~~~~~~~lv~ey~~~GsL 447 (468)
.+++.. ....+ ..++|+||+++..+
T Consensus 80 P~~~~~~~g~~~~~~~g--~~~~l~~~l~G~~~ 110 (322)
T 2ppq_A 80 PLPLPRKDGELLGELSG--RPAALISFLEGMWL 110 (322)
T ss_dssp CCBCCBTTCCSCEEETT--EEEEEEECCCCBCC
T ss_pred CcccCCCCCCEEEEECC--EEEEEEEeCCCcCC
Confidence 222211 11112 46899999997654
No 447
>2l9u_A Receptor tyrosine-protein kinase ERBB-3; transmenbrane dimer, membrane protein, EGFR; NMR {Homo sapiens}
Probab=34.51 E-value=29 Score=20.47 Aligned_cols=24 Identities=17% Similarity=0.267 Sum_probs=12.4
Q ss_pred hhhHHHHHHHHHHHHHhhhheeec
Q 012224 295 EIVTGTMVGVLFLVAGFTGLQRCK 318 (468)
Q Consensus 295 ~vv~g~vv~v~~~i~~~~~~rr~~ 318 (468)
-+++|.++.++++-..++++|.|+
T Consensus 11 t~i~gl~vif~~lg~tflywrgrr 34 (40)
T 2l9u_A 11 TVIAGLVVIFMMLGGTFLYWRGRR 34 (40)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCceeEEEcccc
Confidence 345555555555555555555444
No 448
>2l34_A TYRO protein tyrosine kinase-binding protein; immunoreceptor, transmembrane assembly, DAP12, protein bindi; NMR {Homo sapiens} PDB: 2l35_B
Probab=32.82 E-value=47 Score=19.58 Aligned_cols=21 Identities=24% Similarity=0.271 Sum_probs=9.5
Q ss_pred hhhHHHHHHHHHHHHHhhhhe
Q 012224 295 EIVTGTMVGVLFLVAGFTGLQ 315 (468)
Q Consensus 295 ~vv~g~vv~v~~~i~~~~~~r 315 (468)
+++++.+++..++.+.+|+++
T Consensus 11 GIVvgdi~~t~~i~~~vy~~~ 31 (33)
T 2l34_A 11 GIVVGDLVLTVLIALAVYFLG 31 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC
T ss_pred eEeHHHHHHHHHHHHHHhhee
Confidence 444444444444444444443
No 449
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=31.19 E-value=50 Score=32.21 Aligned_cols=71 Identities=11% Similarity=0.104 Sum_probs=46.0
Q ss_pred HhccCCceEEEEEEECC--------CCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCc-cceeeEEEcCCCCcE
Q 012224 365 IIGSSPDSLVYKGTMKG--------GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENT-GKLLGYCRESSPFTR 435 (468)
Q Consensus 365 ~lg~G~~g~vy~~~~~~--------g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nl-v~l~g~~~~~~~~~~ 435 (468)
.|+.|-...+|+...++ +..+++|+.... . ....+.+|..++..+...++ .++++.+. +
T Consensus 80 ~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~----~~~~li~E~~~l~~L~~~g~~P~l~~~~~--~---- 147 (429)
T 1nw1_A 80 RIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--E----TESHLVAESVIFTLLSERHLGPKLYGIFS--G---- 147 (429)
T ss_dssp EECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--C----CHHHHHHHHHHHHHHHHTTSSSCEEEEET--T----
T ss_pred EeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--C----cHHHHHHHHHHHHHHHhCCCCCcEEEEeC--C----
Confidence 46778889999998863 467888776211 1 11355678888887754445 35555442 2
Q ss_pred EEEEEecCCCCh
Q 012224 436 MLVFDYASNGTL 447 (468)
Q Consensus 436 ~lv~ey~~~GsL 447 (468)
.+|+||+++.++
T Consensus 148 g~v~e~l~G~~l 159 (429)
T 1nw1_A 148 GRLEEYIPSRPL 159 (429)
T ss_dssp EEEECCCCEEEC
T ss_pred CEEEEEeCCccc
Confidence 389999986444
No 450
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=30.51 E-value=35 Score=31.69 Aligned_cols=77 Identities=9% Similarity=0.043 Sum_probs=38.6
Q ss_pred hccCCceE-EEEEEECCCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCC--CCccceeeEEEcCCCCcEEEEEEec
Q 012224 366 IGSSPDSL-VYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINH--ENTGKLLGYCRESSPFTRMLVFDYA 442 (468)
Q Consensus 366 lg~G~~g~-vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H--~nlv~l~g~~~~~~~~~~~lv~ey~ 442 (468)
++.|.... +|+....+|..+++|....... .++..|++++..++. -.+.+++.++. . .-++|+|++
T Consensus 26 l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~-------~~~~~e~~~l~~L~~~g~~vP~v~~~d~-~---~g~ll~e~l 94 (333)
T 3csv_A 26 LAGDASSRRYQRLRSPTGAKAVLMDWSPEEG-------GDTQPFVDLAQYLRNLDISAPEIYAEEH-A---RGLLLIEDL 94 (333)
T ss_dssp --------CCEEEECTTCCEEEEEECCTTTT-------CCSHHHHHHHHHHHHTTCBCCCEEEEET-T---TTEEEECCC
T ss_pred CCCCCCCceEEEEEcCCCCeEEEEECCCCCC-------ccccHHHHHHHHHHhCCCCCCceeeecC-C---CCEEEEeeC
Confidence 44444433 6677664466777765422110 123345555554432 23445666543 2 237899999
Q ss_pred CCCChhhhhhc
Q 012224 443 SNGTLYEHLHC 453 (468)
Q Consensus 443 ~~GsL~~~L~~ 453 (468)
.+..+.+++..
T Consensus 95 ~~~~l~~~l~~ 105 (333)
T 3csv_A 95 GDALFTEVINN 105 (333)
T ss_dssp CSCBHHHHHHH
T ss_pred CCcchHHHhcC
Confidence 88788777754
No 451
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=26.82 E-value=56 Score=31.36 Aligned_cols=73 Identities=12% Similarity=0.077 Sum_probs=41.5
Q ss_pred HhccCCceEEEEEEECC--------CCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCcc-ceeeEEEcCCCCcE
Q 012224 365 IIGSSPDSLVYKGTMKG--------GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTG-KLLGYCRESSPFTR 435 (468)
Q Consensus 365 ~lg~G~~g~vy~~~~~~--------g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv-~l~g~~~~~~~~~~ 435 (468)
.+..|-...+|+...++ +..+++|+..... .....+.+|.++++.+.-..+. ++++++. +
T Consensus 57 ~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~-----~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~--~---- 125 (379)
T 3feg_A 57 PVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAIL-----QGVDSLVLESVMFAILAERSLGPQLYGVFP--E---- 125 (379)
T ss_dssp EC-----CCEEEEECCTTSCCCSSCCSEEEEEECC--------CCHHHHHHHHHHHHHHHHTTSSCCEEEEET--T----
T ss_pred EcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCcc-----chHHHHHHHHHHHHHHHhcCCCCeEEEEcC--C----
Confidence 34556677899998752 4678887742111 1234566888888777544444 4554442 2
Q ss_pred EEEEEecCCCChh
Q 012224 436 MLVFDYASNGTLY 448 (468)
Q Consensus 436 ~lv~ey~~~GsL~ 448 (468)
.+|+||+++..|.
T Consensus 126 g~v~e~i~G~~l~ 138 (379)
T 3feg_A 126 GRLEQYIPSRPLK 138 (379)
T ss_dssp EEEEECCSEEECC
T ss_pred ccEEEEecCccCC
Confidence 2999999976553
No 452
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=25.93 E-value=70 Score=31.57 Aligned_cols=73 Identities=12% Similarity=0.097 Sum_probs=44.4
Q ss_pred hHhccCCceEEEEEEECC-CCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCcc-ceeeEEEcCCCCcEEEEEEe
Q 012224 364 NIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTG-KLLGYCRESSPFTRMLVFDY 441 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~~-g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv-~l~g~~~~~~~~~~~lv~ey 441 (468)
..|+.|-...+|+....+ +..+++|+........ . +-.+|..++..+...+++ ++++++ . + .+||||
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~---i--dR~~E~~vl~~L~~~gl~P~ll~~~-~-~----G~v~e~ 182 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEI---I--NREREKKISCILYNKNIAKKIYVFF-T-N----GRIEEF 182 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-CCSC---S--CHHHHHHHHHHHTTSSSBCCEEEEE-T-T----EEEEEC
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCChhhh---c--CHHHHHHHHHHHHhcCCCCCEEEEe-C-C----eEEEEe
Confidence 346778888999999875 4677787652211110 0 114688888888656664 555555 2 2 259999
Q ss_pred cCCCCh
Q 012224 442 ASNGTL 447 (468)
Q Consensus 442 ~~~GsL 447 (468)
+++..|
T Consensus 183 I~G~~l 188 (458)
T 2qg7_A 183 MDGYAL 188 (458)
T ss_dssp CCSEEC
T ss_pred eCCccC
Confidence 997554
No 453
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=25.90 E-value=86 Score=21.64 Aligned_cols=16 Identities=19% Similarity=0.137 Sum_probs=8.4
Q ss_pred hhhhhhHHHHHHHHHH
Q 012224 292 LTLEIVTGTMVGVLFL 307 (468)
Q Consensus 292 i~~~vv~g~vv~v~~~ 307 (468)
++++.+++.++++.+.
T Consensus 12 ivlGg~~~lll~~glc 27 (70)
T 2klu_A 12 IVLGGVAGLLLFIGLG 27 (70)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHH
Confidence 3456666665544433
No 454
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=24.83 E-value=46 Score=30.37 Aligned_cols=70 Identities=13% Similarity=0.130 Sum_probs=39.7
Q ss_pred hHhccCCceEEEEEEECCCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCCCCCcc-ceeeEEEcCCCCcEEEEEEec
Q 012224 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTG-KLLGYCRESSPFTRMLVFDYA 442 (468)
Q Consensus 364 ~~lg~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~H~nlv-~l~g~~~~~~~~~~~lv~ey~ 442 (468)
+.|+.|-...+|+. ..+++|......... ....+|.+++..++...+. ++++++ .+ .-++|+||+
T Consensus 24 ~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~-----~~r~~E~~~l~~l~~~g~~P~~~~~~--~~--~~~~v~e~i 89 (301)
T 3dxq_A 24 LERLGGLTNLVFRA-----GDLCLRIPGKGTEEY-----INRANEAVAAREAAKAGVSPEVLHVD--PA--TGVMVTRYI 89 (301)
T ss_dssp EEEESCSSEEEEEE-----TTEEEEEECC----C-----CCHHHHHHHHHHHHHTTSSCCEEEEC--TT--TCCEEEECC
T ss_pred eEcCCcccccccee-----eeEEEECCCCCccce-----eCHHHHHHHHHHHHHcCCCCceEEEE--CC--CCEEEEeec
Confidence 35778888999998 457787763221110 1124566666665433444 444432 32 357899999
Q ss_pred -CCCCh
Q 012224 443 -SNGTL 447 (468)
Q Consensus 443 -~~GsL 447 (468)
++.++
T Consensus 90 ~~g~~l 95 (301)
T 3dxq_A 90 AGAQTM 95 (301)
T ss_dssp TTCEEC
T ss_pred CCCccC
Confidence 54444
No 455
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=21.34 E-value=3.3e+02 Score=25.03 Aligned_cols=68 Identities=3% Similarity=0.048 Sum_probs=38.5
Q ss_pred ccCCceEEEEEEECCCCeEEEEEEeecccccchhhHHHHHHHHHHHhcCC---CCCccceeeE------EEcCCCCcEEE
Q 012224 367 GSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN---HENTGKLLGY------CRESSPFTRML 437 (468)
Q Consensus 367 g~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~~f~~e~~~l~~l~---H~nlv~l~g~------~~~~~~~~~~l 437 (468)
|.|....||+....+| .+++|+...... ..|.+++..++ -+.+.+.+.. +...+ ..++
T Consensus 32 G~g~~N~vy~v~~~~g-~~vLK~~~~~~~----------~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g--~~~~ 98 (339)
T 3i1a_A 32 GADTNAFAYQADSESK-SYFIKLKYGYHD----------EINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKH--FKII 98 (339)
T ss_dssp TSCSSCEEEEEECSSC-EEEEEEEECSSC----------CHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSS--EEEE
T ss_pred cCccccceEEEEeCCC-CEEEEEecCccc----------hHHHHHHHHHHhcCCcccccceecCCCCEEEEECC--EEEE
Confidence 4444678999988777 889997643221 12333333221 1113343322 12223 5789
Q ss_pred EEEecCCCCh
Q 012224 438 VFDYASNGTL 447 (468)
Q Consensus 438 v~ey~~~GsL 447 (468)
||||+++..+
T Consensus 99 l~~~i~G~~~ 108 (339)
T 3i1a_A 99 AYPFIHAPNG 108 (339)
T ss_dssp EEECCCCCBT
T ss_pred EEeccCCCcC
Confidence 9999998765
Done!