Query 012225
Match_columns 468
No_of_seqs 207 out of 2128
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 05:13:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012225.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012225hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1aoz_A Ascorbate oxidase; oxid 100.0 2.4E-82 8.2E-87 673.5 48.0 421 29-468 2-458 (552)
2 3sqr_A Laccase; multicopper ox 100.0 4.1E-82 1.4E-86 667.7 47.2 399 28-468 65-476 (580)
3 3t6v_A Laccase; beta barrel, o 100.0 2.8E-80 9.5E-85 646.2 46.9 398 31-468 5-410 (495)
4 3pxl_A Laccase; 4-copper prote 100.0 2.5E-80 8.7E-85 646.5 46.3 395 31-468 4-408 (499)
5 1zpu_A Iron transport multicop 100.0 3E-79 1E-83 645.5 46.4 395 29-468 1-405 (534)
6 1v10_A Laccase; multicopper bl 100.0 2.3E-78 7.7E-83 638.0 42.2 402 27-468 20-430 (521)
7 1hfu_A Laccase 1; oxidoreducta 100.0 1E-75 3.5E-80 615.7 43.5 393 32-468 6-409 (503)
8 2q9o_A Laccase-1; multicopper 100.0 1.7E-74 5.8E-79 612.9 48.2 399 27-468 30-444 (559)
9 2uxt_A Protein SUFI, SUFI; oxi 100.0 7.2E-70 2.5E-74 563.6 25.0 348 29-468 17-380 (451)
10 2xu9_A Laccase; oxidoreductase 100.0 2.8E-68 9.5E-73 550.8 32.9 347 27-468 13-383 (439)
11 2wsd_A Spore coat protein A; o 100.0 2.4E-66 8.2E-71 545.8 34.7 361 30-468 25-432 (513)
12 3abg_A Bilirubin oxidase; clea 100.0 6.1E-67 2.1E-71 550.9 29.5 356 30-468 36-411 (534)
13 3aw5_A Multicopper oxidase; be 100.0 8.9E-67 3E-71 539.7 24.9 322 52-468 28-375 (448)
14 3zx1_A Oxidoreductase, putativ 100.0 1.5E-65 5E-70 532.0 33.1 353 25-467 45-419 (481)
15 3od3_A Blue copper oxidase CUE 100.0 6.3E-65 2.1E-69 527.1 30.0 247 28-295 15-271 (488)
16 3gyr_A PHS, phenoxazinone synt 100.0 2.9E-62 1E-66 527.5 34.4 243 29-291 31-351 (612)
17 2g23_A PHS, phenoxazinone synt 100.0 1.6E-61 5.5E-66 513.7 36.2 249 28-295 30-356 (612)
18 3g5w_A Multicopper oxidase typ 100.0 6E-55 2E-59 431.8 30.6 271 29-318 1-278 (318)
19 2zwn_A Two-domain type laccase 100.0 8.6E-54 2.9E-58 427.8 31.3 271 29-318 2-279 (339)
20 2j5w_A Ceruloplasmin, ferroxid 100.0 1.2E-53 3.9E-58 482.2 29.1 389 24-468 15-486 (1065)
21 1kbv_A ANIA, major outer membr 100.0 2.8E-51 9.6E-56 407.6 28.0 262 26-318 34-309 (327)
22 3gdc_A Multicopper oxidase; be 100.0 7E-49 2.4E-53 383.6 27.4 234 30-296 34-273 (288)
23 2zoo_A Probable nitrite reduct 100.0 2.4E-47 8.4E-52 395.2 27.7 263 26-318 24-299 (442)
24 1mzy_A Copper-containing nitri 100.0 6.5E-46 2.2E-50 370.5 26.9 270 24-318 26-320 (333)
25 3kw8_A Laccase, putative coppe 100.0 3.4E-46 1.2E-50 362.4 23.3 240 26-317 3-266 (276)
26 1oe1_A Dissimilatory copper-co 100.0 4.3E-46 1.5E-50 372.3 23.4 266 27-318 29-320 (336)
27 3t9w_A Small laccase, multi-co 100.0 1.7E-45 5.8E-50 361.0 21.9 242 24-317 23-288 (299)
28 3tas_A Small laccase, multi-co 100.0 1.5E-45 5.3E-50 364.0 21.7 242 24-317 7-272 (313)
29 2bw4_A Copper-containing nitri 100.0 1.7E-45 5.8E-50 368.6 21.3 269 25-318 33-326 (340)
30 3cg8_A Laccase; oxidoreductase 100.0 4.6E-42 1.6E-46 342.8 22.1 236 29-317 47-307 (343)
31 1sdd_B Coagulation factor V; c 100.0 8.3E-42 2.9E-46 369.2 24.8 248 27-296 3-312 (647)
32 2dv6_A Nitrite reductase; elec 100.0 1.3E-40 4.4E-45 345.4 29.9 257 29-318 162-435 (447)
33 1sdd_A Coagulation factor V; c 100.0 2.6E-43 8.7E-48 347.2 7.0 212 50-296 50-285 (306)
34 2r7e_A Coagulation factor VIII 100.0 2.6E-42 8.7E-47 375.4 10.3 240 34-297 50-315 (742)
35 2r7e_B Coagulation factor VIII 100.0 4.9E-42 1.7E-46 373.7 10.8 249 27-296 130-441 (770)
36 2dv6_A Nitrite reductase; elec 100.0 1.6E-37 5.3E-42 322.2 19.5 333 26-468 24-375 (447)
37 2r7e_A Coagulation factor VIII 100.0 1E-37 3.5E-42 339.3 5.0 217 56-297 447-697 (742)
38 2j5w_A Ceruloplasmin, ferroxid 100.0 3.7E-34 1.3E-38 323.3 15.4 227 47-295 616-883 (1065)
39 3cvb_A Plastocyanin; cupredoxi 99.7 6.7E-18 2.3E-22 138.9 2.7 90 56-149 14-105 (105)
40 2uxt_A Protein SUFI, SUFI; oxi 99.7 4.6E-15 1.6E-19 153.1 20.7 238 30-297 152-427 (451)
41 3kw8_A Laccase, putative coppe 99.6 5.5E-16 1.9E-20 149.9 11.0 99 52-152 157-268 (276)
42 2xu9_A Laccase; oxidoreductase 99.6 7.4E-15 2.5E-19 151.2 20.0 232 30-296 146-425 (439)
43 2zwn_A Two-domain type laccase 99.6 1.9E-15 6.6E-20 150.3 8.8 82 193-296 24-108 (339)
44 1hfu_A Laccase 1; oxidoreducta 99.5 3.3E-13 1.1E-17 141.2 22.2 261 32-297 143-456 (503)
45 1v10_A Laccase; multicopper bl 99.5 2.5E-13 8.6E-18 142.6 21.4 239 50-297 192-477 (521)
46 2cal_A Rusticyanin; iron respi 99.5 2.8E-14 9.7E-19 125.2 10.9 99 45-148 46-154 (154)
47 3cg8_A Laccase; oxidoreductase 99.5 7.6E-14 2.6E-18 138.8 10.8 104 52-157 198-314 (343)
48 1iby_A Nitrosocyanin; RED copp 99.5 2.1E-13 7.1E-18 113.3 10.6 105 31-149 2-112 (112)
49 3zx1_A Oxidoreductase, putativ 99.5 2.6E-12 8.8E-17 133.0 19.7 241 31-296 181-466 (481)
50 3g5w_A Multicopper oxidase typ 99.4 1.3E-13 4.4E-18 135.8 8.6 84 193-296 23-107 (318)
51 3gdc_A Multicopper oxidase; be 99.4 1.5E-13 5.2E-18 133.5 8.7 83 192-296 54-136 (288)
52 1aoz_A Ascorbate oxidase; oxid 99.4 9.7E-12 3.3E-16 131.6 20.9 217 62-297 205-511 (552)
53 3t6v_A Laccase; beta barrel, o 99.4 2.1E-11 7.3E-16 126.8 22.9 244 49-297 168-457 (495)
54 1fwx_A Nitrous oxide reductase 99.4 6.3E-13 2.2E-17 139.3 10.5 95 45-151 497-594 (595)
55 1zpu_A Iron transport multicop 99.4 3.1E-11 1E-15 127.0 22.6 231 49-297 167-467 (534)
56 3od3_A Blue copper oxidase CUE 99.4 1.6E-11 5.5E-16 127.1 18.6 248 31-296 151-475 (488)
57 3pxl_A Laccase; 4-copper prote 99.4 3.3E-11 1.1E-15 125.5 20.1 244 49-297 166-457 (499)
58 3aw5_A Multicopper oxidase; be 99.3 2.6E-11 8.9E-16 124.9 18.8 217 31-282 138-419 (448)
59 2q9o_A Laccase-1; multicopper 99.3 1.7E-10 5.7E-15 122.2 24.5 246 49-297 195-507 (559)
60 2g23_A PHS, phenoxazinone synt 99.3 1.1E-10 3.8E-15 123.9 21.1 232 49-297 254-577 (612)
61 2ov0_A Amicyanin; beta-sandwic 99.3 8.8E-12 3E-16 102.2 8.9 78 55-148 27-105 (105)
62 1sdd_A Coagulation factor V; c 99.2 4.9E-13 1.7E-17 131.0 -0.6 98 49-151 201-302 (306)
63 2gim_A Plastocyanin; beta shee 99.2 1.5E-11 5.3E-16 100.8 7.9 83 60-149 19-106 (106)
64 2wsd_A Spore coat protein A; o 99.2 1.1E-10 3.8E-15 122.3 15.4 218 49-297 230-496 (513)
65 3tas_A Small laccase, multi-co 99.2 9E-11 3.1E-15 115.3 12.8 100 52-152 163-274 (313)
66 1sdd_B Coagulation factor V; c 99.2 2.5E-11 8.5E-16 130.9 9.2 101 48-150 225-328 (647)
67 3abg_A Bilirubin oxidase; clea 99.2 2.6E-10 8.9E-15 119.8 16.4 248 31-297 172-461 (534)
68 3t9w_A Small laccase, multi-co 99.1 1.7E-10 5.8E-15 112.5 11.7 100 52-152 179-290 (299)
69 2aan_A Auracyanin A; cupredoxi 99.1 3.9E-10 1.3E-14 97.2 10.9 90 57-148 31-139 (139)
70 1qhq_A Protein (auracyanin); e 99.1 9.4E-10 3.2E-14 94.9 12.3 91 58-149 30-140 (140)
71 3sqr_A Laccase; multicopper ox 99.0 1.1E-08 3.9E-13 107.8 21.1 240 50-297 226-530 (580)
72 3c75_A Amicyanin; copper prote 99.0 1.1E-09 3.9E-14 93.3 9.0 78 55-148 54-132 (132)
73 4hci_A Cupredoxin 1; structura 99.0 1.6E-09 5.6E-14 87.7 8.2 79 55-148 22-100 (100)
74 2plt_A Plastocyanin; electron 98.9 8.9E-10 3E-14 88.8 5.2 79 61-148 18-98 (98)
75 3gyr_A PHS, phenoxazinone synt 98.9 4.9E-08 1.7E-12 104.5 19.4 92 193-297 459-577 (612)
76 1pcs_A Plastocyanin; electron 98.9 9.7E-10 3.3E-14 88.6 3.5 81 60-148 18-98 (98)
77 1bxv_A Plastocyanin; copper pr 98.8 5.1E-09 1.7E-13 83.0 6.8 74 60-148 18-91 (91)
78 1kbv_A ANIA, major outer membr 98.8 8.8E-09 3E-13 101.6 8.3 102 49-152 198-310 (327)
79 1b3i_A PETE protein, protein ( 98.8 8.8E-09 3E-13 82.7 6.3 76 61-148 19-97 (97)
80 1kdj_A Plastocyanin; electron 98.8 1.6E-08 5.3E-13 82.1 7.9 79 60-148 16-102 (102)
81 1byp_A Protein (plastocyanin); 98.8 2.9E-08 1E-12 79.9 9.1 76 61-148 17-99 (99)
82 1plc_A Plastocyanin; electron 98.8 3.1E-08 1.1E-12 79.8 9.1 76 61-148 17-99 (99)
83 3erx_A Pseudoazurin; copper pr 98.7 3.6E-08 1.2E-12 82.6 8.3 75 61-150 21-95 (123)
84 2r7e_B Coagulation factor VIII 98.7 2.5E-09 8.6E-14 116.6 1.4 98 50-149 355-456 (770)
85 1mzy_A Copper-containing nitri 98.7 4.3E-08 1.5E-12 96.9 9.6 98 50-152 210-321 (333)
86 3tu6_A Pseudoazurin (blue copp 98.7 3.3E-08 1.1E-12 83.3 7.2 76 61-151 23-98 (127)
87 3ef4_A Pseudoazurin, blue copp 98.7 4.5E-08 1.5E-12 82.0 7.5 75 61-150 22-96 (124)
88 2bw4_A Copper-containing nitri 98.7 7.5E-08 2.6E-12 95.5 10.2 98 50-152 216-327 (340)
89 2zoo_A Probable nitrite reduct 98.6 8.1E-08 2.8E-12 98.7 8.8 101 50-152 189-300 (442)
90 1oe1_A Dissimilatory copper-co 98.6 2.7E-07 9.2E-12 91.3 11.1 98 50-152 210-321 (336)
91 1iuz_A Plastocyanin; electron 98.5 1.4E-07 4.9E-12 75.8 5.7 77 60-148 17-98 (98)
92 1paz_A Pseudoazurin precursor; 98.5 4.5E-07 1.5E-11 76.0 8.2 75 61-150 21-95 (123)
93 1cuo_A Protein (azurin ISO-2); 98.4 5.4E-07 1.8E-11 76.1 8.0 92 57-149 14-129 (129)
94 1pmy_A Pseudoazurin; electron 98.4 7.8E-07 2.7E-11 74.5 7.5 75 61-150 21-95 (123)
95 3ay2_A Lipid modified azurin p 98.3 1.7E-06 6E-11 76.0 9.6 97 52-149 47-167 (167)
96 1id2_A Amicyanin; beta barrel, 98.3 4.9E-06 1.7E-10 67.8 10.3 77 56-148 29-106 (106)
97 3sbq_A Nitrous-oxide reductase 98.2 4.5E-06 1.6E-10 86.0 10.8 93 45-150 540-638 (638)
98 2ccw_A Azurin II, AZN-2; elect 98.2 6.1E-06 2.1E-10 69.6 9.7 92 57-149 14-129 (129)
99 1nwp_A Azurin; electron transp 98.2 6.9E-06 2.4E-10 69.1 9.1 91 57-148 14-128 (128)
100 2iaa_C Azurin; quinoprotein, t 98.2 8E-06 2.7E-10 68.7 9.3 92 57-149 13-128 (128)
101 2ux6_A Pseudoazurin; type-1 co 98.1 7.2E-06 2.5E-10 68.5 8.1 73 61-150 21-93 (122)
102 3fsa_A Azurin; copper, cupredo 97.6 0.00031 1.1E-08 58.3 9.2 88 57-148 14-125 (125)
103 2cua_A Protein (CUA); CUA cent 97.2 0.0018 6.1E-08 54.8 9.3 73 61-149 60-135 (135)
104 2aan_A Auracyanin A; cupredoxi 97.0 0.0012 4.1E-08 56.1 7.1 78 215-294 33-124 (139)
105 3s8f_B Cytochrome C oxidase su 97.0 0.003 1E-07 55.3 9.3 75 61-149 93-168 (168)
106 3cvb_A Plastocyanin; cupredoxi 96.8 0.00097 3.3E-08 53.5 4.1 73 216-294 18-90 (105)
107 1iby_A Nitrosocyanin; RED copp 96.7 0.0055 1.9E-07 49.8 7.8 60 216-294 37-96 (112)
108 4hci_A Cupredoxin 1; structura 96.0 0.019 6.4E-07 45.5 7.3 59 216-293 27-85 (100)
109 2ccw_A Azurin II, AZN-2; elect 95.7 0.01 3.5E-07 49.7 4.7 77 216-293 17-112 (129)
110 1nwp_A Azurin; electron transp 95.6 0.013 4.3E-07 49.0 4.7 78 216-294 17-113 (128)
111 2cal_A Rusticyanin; iron respi 95.5 0.062 2.1E-06 46.3 9.1 83 194-294 52-138 (154)
112 2gim_A Plastocyanin; beta shee 95.3 0.0045 1.6E-07 49.6 1.2 73 216-294 19-91 (106)
113 1qhq_A Protein (auracyanin); e 95.1 0.04 1.4E-06 46.5 6.5 76 216-294 32-123 (140)
114 2iaa_C Azurin; quinoprotein, t 94.9 0.028 9.6E-07 46.9 4.7 77 216-293 16-111 (128)
115 1cuo_A Protein (azurin ISO-2); 94.7 0.023 7.9E-07 47.5 3.9 78 216-294 17-113 (129)
116 3fsa_A Azurin; copper, cupredo 94.2 0.016 5.4E-07 48.0 1.6 79 215-294 16-113 (125)
117 3ay2_A Lipid modified azurin p 93.7 0.081 2.8E-06 46.1 5.4 78 216-294 57-151 (167)
118 2plt_A Plastocyanin; electron 93.5 0.12 4E-06 40.5 5.6 68 216-294 17-84 (98)
119 1pcs_A Plastocyanin; electron 93.4 0.11 3.8E-06 40.6 5.4 67 216-294 18-84 (98)
120 1fwx_A Nitrous oxide reductase 93.2 0.29 1E-05 51.3 9.5 61 216-294 512-574 (595)
121 1bxv_A Plastocyanin; copper pr 93.1 0.27 9.2E-06 37.6 7.1 60 216-294 18-77 (91)
122 1b3i_A PETE protein, protein ( 91.4 0.21 7.3E-06 38.8 4.6 64 216-294 18-83 (97)
123 2ov0_A Amicyanin; beta-sandwic 89.9 0.46 1.6E-05 37.7 5.4 62 216-294 32-93 (105)
124 1kdj_A Plastocyanin; electron 89.6 0.2 6.7E-06 39.5 2.9 66 215-294 15-88 (102)
125 1iuz_A Plastocyanin; electron 89.6 0.73 2.5E-05 35.9 6.2 68 215-293 16-83 (98)
126 1plc_A Plastocyanin; electron 86.5 0.6 2E-05 36.4 3.9 68 216-294 16-85 (99)
127 3sbq_A Nitrous-oxide reductase 84.2 3.3 0.00011 43.0 8.9 61 216-294 557-619 (638)
128 1yew_A Particulate methane mon 83.9 3.4 0.00012 39.8 8.3 67 50-122 253-336 (382)
129 2cua_A Protein (CUA); CUA cent 83.1 3.7 0.00013 34.1 7.5 58 217-294 60-117 (135)
130 3c75_A Amicyanin; copper prote 82.8 1.7 5.8E-05 36.0 5.2 61 216-293 59-119 (132)
131 2gsm_B Cytochrome C oxidase su 82.1 9.5 0.00033 35.5 10.6 75 61-150 171-247 (262)
132 3hb3_B Cytochrome C oxidase su 81.7 11 0.00039 35.6 11.1 76 61-150 189-265 (298)
133 1id2_A Amicyanin; beta barrel, 81.1 2.3 7.9E-05 33.6 5.3 62 216-294 33-94 (106)
134 3isy_A Bsupi, intracellular pr 80.9 12 0.00042 30.3 9.5 72 223-296 16-102 (120)
135 3isy_A Bsupi, intracellular pr 80.4 21 0.00073 28.8 12.5 73 49-132 22-100 (120)
136 1cyx_A CYOA; electron transpor 78.6 5.8 0.0002 35.4 7.5 74 61-148 41-115 (205)
137 3s8f_B Cytochrome C oxidase su 77.7 6.6 0.00023 33.9 7.4 58 217-294 93-150 (168)
138 3erx_A Pseudoazurin; copper pr 77.2 1.1 3.9E-05 36.7 2.3 74 216-315 20-93 (123)
139 3rfr_A PMOB; membrane, oxidore 74.3 11 0.00037 36.8 8.5 138 2-146 229-410 (419)
140 1byp_A Protein (plastocyanin); 74.2 2.1 7.2E-05 33.1 3.1 30 433-464 17-46 (99)
141 1v54_B Cytochrome C oxidase po 73.0 24 0.00082 32.0 10.3 74 61-149 140-215 (227)
142 3tu6_A Pseudoazurin (blue copp 66.3 1.8 6.1E-05 35.7 1.0 75 216-316 22-96 (127)
143 1paz_A Pseudoazurin precursor; 64.9 4.4 0.00015 33.1 3.1 74 216-315 20-93 (123)
144 2ux6_A Pseudoazurin; type-1 co 63.6 7.4 0.00025 31.6 4.3 59 216-293 20-78 (122)
145 1pmy_A Pseudoazurin; electron 62.5 4.1 0.00014 33.2 2.6 74 216-315 20-93 (123)
146 2r39_A FIXG-related protein; s 60.4 22 0.00076 28.4 6.7 47 225-281 33-81 (118)
147 2f1e_A Protein APAG; APAG prot 54.9 8.1 0.00028 31.7 3.1 48 72-119 34-87 (127)
148 1jer_A Cucumber stellacyanin; 53.9 14 0.00046 30.8 4.3 36 117-152 76-111 (138)
149 3ef4_A Pseudoazurin, blue copp 52.1 6.9 0.00024 32.0 2.2 74 216-315 21-94 (124)
150 1xwv_A DER F II; beta sheets, 51.4 18 0.00061 29.5 4.7 61 61-121 25-93 (129)
151 1xvs_A Protein APAG; MCSG APC2 51.4 8.4 0.00029 31.6 2.6 49 72-120 33-87 (126)
152 1x9u_A Umecyanin; cupredoxin, 50.7 15 0.00051 29.6 3.9 35 116-151 72-107 (116)
153 1xq4_A Protein APAG; all beta 50.2 11 0.00038 31.4 3.2 49 72-120 38-92 (139)
154 1nep_A EPV20, BNPC2, epididyma 49.8 17 0.00059 29.7 4.4 69 52-121 18-95 (130)
155 1tza_A APAG protein, SOR45; st 45.3 9.8 0.00034 31.5 2.1 49 72-120 33-87 (134)
156 1cyx_A CYOA; electron transpor 41.6 71 0.0024 28.3 7.2 59 217-295 41-99 (205)
157 2xzz_A Protein-glutamine gamma 35.6 29 0.001 27.1 3.4 53 69-126 22-78 (102)
158 1ws8_A Mavicyanin; oxidized fo 34.6 36 0.0012 26.9 3.8 34 116-150 72-105 (109)
159 2h7w_A Chagasin; beta-strands, 33.4 1.9E+02 0.0065 23.5 8.2 65 60-127 32-104 (131)
160 1fft_B Ubiquinol oxidase; elec 31.2 21 0.00072 34.0 2.2 74 61-148 151-225 (315)
161 2kut_A Uncharacterized protein 29.4 1.3E+02 0.0046 24.1 6.5 54 66-121 13-74 (122)
162 2p9r_A Alpha-2-M, alpha-2-macr 26.5 33 0.0011 26.3 2.2 68 221-295 13-84 (102)
163 1lm8_V VHL, VON hippel-lindau 26.0 66 0.0023 27.3 4.2 42 66-115 14-55 (160)
164 2x3c_A Toxic extracellular end 25.5 2.2E+02 0.0074 27.3 8.4 69 62-131 27-125 (343)
165 2wtp_A ORF131 protein, CZCE; m 24.7 26 0.0009 28.7 1.3 20 217-236 71-90 (131)
166 4ajy_V VON hippel-lindau disea 23.8 77 0.0026 26.9 4.2 44 65-116 16-59 (163)
167 2wgn_B Inhibitor of cysteine p 23.4 2.9E+02 0.0098 22.4 7.6 72 54-127 28-105 (132)
168 2gsm_B Cytochrome C oxidase su 23.3 1.9E+02 0.0066 26.5 7.2 58 217-294 171-228 (262)
169 1xvs_A Protein APAG; MCSG APC2 23.3 85 0.0029 25.5 4.2 50 226-278 31-84 (126)
170 3rpf_C Molybdopterin convertin 23.2 31 0.0011 24.9 1.4 26 49-74 42-68 (74)
171 2hj1_A Hypothetical protein; s 22.7 28 0.00095 27.0 1.1 24 50-73 59-82 (97)
172 1tza_A APAG protein, SOR45; st 21.2 95 0.0033 25.5 4.1 50 226-278 31-84 (134)
173 3idu_A Uncharacterized protein 21.1 3.2E+02 0.011 21.9 10.0 68 220-297 28-98 (127)
174 2f1e_A Protein APAG; APAG prot 20.6 1E+02 0.0036 25.0 4.2 50 226-278 32-85 (127)
175 3kmh_A D-lyxose isomerase; cup 20.3 1.6E+02 0.0054 26.7 5.6 57 216-277 128-184 (246)
No 1
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=100.00 E-value=2.4e-82 Score=673.49 Aligned_cols=421 Identities=28% Similarity=0.537 Sum_probs=327.3
Q ss_pred ccEEEEEEEEEEEECCCCceEEEEEEcCcCCCceEEEecCCEEEEEEEeCCC-CCceeecCcccCCCCCCCCCCCC-CCC
Q 012225 29 DTIFYDFKVSYITASPLGVPQQVIAINGKFPGAVLNATTNNNIVINVQNDLD-ESLLMTWPGIQMRRNSWQDGVQG-TNC 106 (468)
Q Consensus 29 ~~~~~~l~~~~~~~~~dG~~~~~~~~Ng~~PgP~i~~~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~~~DGv~~-tq~ 106 (468)
.+|+|+|+|++..+++||+++.+|+|||++|||+||+++||+|+|+|+|+++ ++++|||||+++.+++|+||+++ |||
T Consensus 2 ~~~~y~~~v~~~~~~~dg~~~~~~~~Ng~~PGP~I~~~~GD~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~~vtq~ 81 (552)
T 1aoz_A 2 QIRHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQC 81 (552)
T ss_dssp CEEEEEEEEEEEEECTTSSCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBTTTBC
T ss_pred eEEEEEEEEEEEEEcCCCceEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCCCeeEEeCCCccCCCcccCCCcccccC
Confidence 5899999999999999999999999999999999999999999999999998 99999999999999999999998 999
Q ss_pred CcCCCCceEEEEEeCCCceeeEEeeCccccccCCeeecEEEecCCCCCCCCCCCCCcEEEEEeeeeecchHHHHHHhhcC
Q 012225 107 PIPSQWNWTYQFQVKDQIGSFFYFPSLNLQRVSGGFGPVIINNRKVIPIPFDQPEGDIIFLIGDWYTRNHTALRTALDSG 186 (468)
Q Consensus 107 ~I~PG~~~~y~f~~~~~~Gt~wyH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~g 186 (468)
+|+||++|+|+|++ +++||||||||.+.|+.+||+|+|||++++....++ .+|+|++|+|+||+++...++...+...
T Consensus 82 ~I~PG~s~tY~f~~-~~~GT~wYHsH~~~q~~~Gl~G~liV~~~~~~~~~~-~~d~e~~l~l~Dw~~~~~~~~~~~~~~~ 159 (552)
T 1aoz_A 82 AINPGETFFYNFTV-DNPGTFFYHGHLGMQRSAGLYGSLIVDPPQGKKEPF-HYDGEINLLLSDWWHQSIHKQEVGLSSK 159 (552)
T ss_dssp CBCTTCEEEEEEEC-CSCEEEEEEECSTTTGGGTCEEEEEEECCTTCCCSS-CCSEEEEEEEEEECSSCHHHHHHHTTSS
T ss_pred CcCCCCeEEEEEEC-CCCEEEEEEECchhHHhccCeeeEEEeCCcccCCCC-CCCccceEEeecccCCCHHHHHhhhhcc
Confidence 99999999999999 789999999999999999999999999986544455 3478999999999998776654433321
Q ss_pred --CCCCCCceEEEcCcCCCCCCCcc-----------C-CCCCcceEEEEcCCCEEEEEEEEcCCCCeeeEEEeCCeeEEE
Q 012225 187 --KDLDMPDGVLINGKGPYRYNTTL-----------V-PDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLV 252 (468)
Q Consensus 187 --~~~~~~~~~liNG~~~~~~~~~~-----------~-~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~Vi 252 (468)
...+.++.++|||+..++|+... . ...+..+.++|++|++|||||||+|..+.+.|+|+||+|+||
T Consensus 160 ~~~~~~~~~~~liNG~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi 239 (552)
T 1aoz_A 160 PIRWIGEPQTILLNGRGQFDCSIAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVV 239 (552)
T ss_dssp SCCCCCSCSEEEETTBCCSSSBTTGGGCTTSCBCCCCSCSTTSCCCEEECTTCEEEEEEEECCSSCEEEEEETTCCEEEE
T ss_pred cccCCCCCCeEEECCccccCcccCcccccccccccccCCCCCCceEEEEcCCCEEEEEEEcccccceEEEEEcCcEEEEE
Confidence 22246789999999988764211 0 112234589999999999999999999999999999999999
Q ss_pred EeeCccccceeeceEEEcCCceEEEEEEe-cCCCCcceEEEEEecccccccccccceEEEEEEcCCCCC--CCCCCCCCC
Q 012225 253 ETEGHYTSQQNYTSFEIHVGQSYSFLVTM-DQNASSDYYIVASARFVNESFWQRVTGVAILHYSNSKGA--ASGPLPEAP 329 (468)
Q Consensus 253 a~DG~~~~p~~~d~i~l~pGqR~dv~v~~-~~~~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~--~~~~~p~~~ 329 (468)
|+||.+++|+.++++.|+|||||||+|++ ++++| +|||++....... ......|+|+|+++... +..+.|. .
T Consensus 240 ~~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g-~y~i~~~~~~~~~---~~~~~~ail~y~~~~~~~~p~~~~p~-~ 314 (552)
T 1aoz_A 240 EADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSE-NYWVSVGTRARHP---NTPPGLTLLNYLPNSVSKLPTSPPPQ-T 314 (552)
T ss_dssp EETTEEEEEEEESCEEECTTCEEEEEEECCSCTTC-CEEEEEEEESSCC---CSCCEEEEEEETTSCTTSCCSSCCCC-C
T ss_pred EECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCC-CEEEEEEcccCCC---CCccEEEEEEECCCCCCCCCCCCCCC-C
Confidence 99999999999999999999999999999 45567 9999998764221 23578899999876531 1111222 2
Q ss_pred CCCcccccccCCccccccCCCCCCCCCCCCCCCCCCccccceEEEEecCCCcccCCeEEEEEcCeeccCCCCchhhhccc
Q 012225 330 SDIYNQWAAMTQPRSIRQNTSASGARPNPQGSFHYGSINITDTYVLRSLPPVTIDGKVRSTLNGISFVKPETPIRLADKY 409 (468)
Q Consensus 330 p~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~i~l~~~~~~~~~g~~~~~iN~~s~~~p~~P~l~~~~~ 409 (468)
|.+++...... ..+. .+......+.| ..+++++.+..... ..++...|+|||++|..|+.|+|.+.++
T Consensus 315 p~~~~~~~~~~--~~l~-~l~~~~~~~~~--------~~~~~~~~l~~~~~-~~~~~~~w~iNg~s~~~p~~P~L~~~~~ 382 (552)
T 1aoz_A 315 PAWDDFDRSKN--FTYR-ITAAMGSPKPP--------VKFNRRIFLLNTQN-VINGYVKWAINDVSLALPPTPYLGAMKY 382 (552)
T ss_dssp CCTTCHHHHHH--HHTT-CCBCTTCCCCC--------SSCSEEEEEEEEEE-EETTEEEEEETTEEECCCSSCHHHHHHT
T ss_pred Ccccccccccc--cccc-ccccCCCCCCC--------CCCcEEEEEEEeec-cCCCeEEEEECCCccCCCCCCHHHHHhh
Confidence 22111111000 0000 01100011112 25678887765321 2345779999999999899999988777
Q ss_pred CCCcccccCCCCCC-----------CCCCCCcceEEEEecCCcEEEEEEecCC------CCCCceeccCCCceeeC
Q 012225 410 NVKGAYKLDFPNKP-----------LTRPPRTDRSLINATYKGFIEIILQNND------TKMQSFHMDGYSFFVVG 468 (468)
Q Consensus 410 ~~~~~~~~~~~~~p-----------~~~~~~~~~~~~~~~~g~~Veivi~N~~------~~~HP~HLHGh~F~Vlg 468 (468)
++++.|..++++.+ .+...+.++.++.++.|++|||+|+|.+ .+.||||||||+|||||
T Consensus 383 ~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~g~~v~ivi~N~~~~~~~~~~~HP~HLHGh~F~Vl~ 458 (552)
T 1aoz_A 383 NLLHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLG 458 (552)
T ss_dssp TCTTSSCCSCCCSCCCTTCCTTSCCCCTTCEEECCCEEECTTCEEEEEEEECCCSSTTCCCCEEEEETTCCEEEEE
T ss_pred cCccccccCCCccccccccccccccccccccccceEEEecCCCEEEEEEeCCcccccccCCCCCEEEcCCceEEEe
Confidence 66666664443321 1223455677889999999999999987 34699999999999985
No 2
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=100.00 E-value=4.1e-82 Score=667.66 Aligned_cols=399 Identities=23% Similarity=0.359 Sum_probs=311.7
Q ss_pred CccEEEEEEEEEEEECCCCceEEEEEEcCcCCCceEEEecCCEEEEEEEeCCC-CCceeecCcccCCCCCCCCCCCC-CC
Q 012225 28 DDTIFYDFKVSYITASPLGVPQQVIAINGKFPGAVLNATTNNNIVINVQNDLD-ESLLMTWPGIQMRRNSWQDGVQG-TN 105 (468)
Q Consensus 28 ~~~~~~~l~~~~~~~~~dG~~~~~~~~Ng~~PgP~i~~~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~~~DGv~~-tq 105 (468)
+.+|+|+|+|++..+++||+++.+|+|||++|||+||+++||+|+|+|+|+++ ++++|||||++|.+++++||+++ ||
T Consensus 65 ~~~~~~~l~v~~~~~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~tsIHwHGl~~~~t~~~DGvp~vTq 144 (580)
T 3sqr_A 65 GVTREYWLSVENSTITPDGYTRSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIHWHGIRQLGSLEYDGVPGVTQ 144 (580)
T ss_dssp CCEEEEEEEEEEEEECSSSBCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEETTCCCTTCGGGSCCBTTTB
T ss_pred ceEEEEEEEEEEEEecCCCeEEEEEEECCccCCceEEEeCCCEEEEEEEECCCCCcceEEecccccCCCccccCCCcccc
Confidence 45799999999999999999999999999999999999999999999999998 89999999999999999999998 99
Q ss_pred CCcCCCCceEEEEEeCCCceeeEEeeCccccccCCeeecEEEecCCCCCCCCCCCCCcE-EEEEeeeeecchHHHHHHhh
Q 012225 106 CPIPSQWNWTYQFQVKDQIGSFFYFPSLNLQRVSGGFGPVIINNRKVIPIPFDQPEGDI-IFLIGDWYTRNHTALRTALD 184 (468)
Q Consensus 106 ~~I~PG~~~~y~f~~~~~~Gt~wyH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~-~l~l~d~~~~~~~~~~~~~~ 184 (468)
|||+||++|+|+|++. ++||||||||.+.|+.+||+|+|||++++. .+ +|+|. +|+|+||+++...++...+.
T Consensus 145 ~pI~PG~sftY~f~~~-q~GT~WYHsH~~~q~~~GL~G~lIV~~p~~--~~---yD~d~~~l~l~Dw~~~~~~~~~~~~~ 218 (580)
T 3sqr_A 145 CPIAPGDTLTYKFQVT-QYGTTWYHSHFSLQYGDGLFGPLIINGPAT--AD---YDEDVGVIFLQDWAHESVFEIWDTAR 218 (580)
T ss_dssp CCBCTTCEEEEEEECC-CCEEEEEEECSTTGGGGTCEEEEEEECCCS--SC---CSEEEEEEEEEEECSSCHHHHHHHHT
T ss_pred CCCCCCCeEEEEEECC-CCcceEEeecccccccCcCEEEEEeeCccc--CC---CCccceEEEEEEEecCCHHHHHHHHh
Confidence 9999999999999994 899999999999999999999999998753 23 48887 99999999998777654443
Q ss_pred cCCCCCCCceEEEcCcCCCCCCCcc---CCCCCcceEEEEcCCCEEEEEEEEcCCCCeeeEEEeCCeeEEEEeeCccccc
Q 012225 185 SGKDLDMPDGVLINGKGPYRYNTTL---VPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYTSQ 261 (468)
Q Consensus 185 ~g~~~~~~~~~liNG~~~~~~~~~~---~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~Via~DG~~~~p 261 (468)
.+ ..+.++.++|||+..++|..+. .......+.++|++|++|||||||+|....+.|+|+||+|+|||+||.+++|
T Consensus 219 ~~-~~~~~d~~liNG~~~~~c~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~VIa~DG~~v~P 297 (580)
T 3sqr_A 219 LG-APPALENTLMNGTNTFDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLVPIVP 297 (580)
T ss_dssp TS-CCCCBSEEEETTBCCCCCTTCCCTTBCCCCCCCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEE
T ss_pred cc-CCCCCceEEECCcccCCCccccccccccCCCceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEEEEEeCCccCCc
Confidence 32 3567899999999988875321 0112346899999999999999999999999999999999999999999999
Q ss_pred eeeceEEEcCCceEEEEEEecCCCCcceEEEEEecccccccccccceEEEEEEcCCCCCCCCCCCCCCCCCcccccccCC
Q 012225 262 QNYTSFEIHVGQSYSFLVTMDQNASSDYYIVASARFVNESFWQRVTGVAILHYSNSKGAASGPLPEAPSDIYNQWAAMTQ 341 (468)
Q Consensus 262 ~~~d~i~l~pGqR~dv~v~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~~p~~~~~~~~~~~ 341 (468)
+.+++|.|+|||||||+|++++++| +|||++.+...+.....+...+|||+|+++... .|. .+........++.
T Consensus 298 ~~~~~l~i~pGqRydVlv~a~~~~g-~Y~i~a~~~~~~~~~~~~~~~~aiL~Y~~~~~~----~P~-~~~~~~~~~~~~~ 371 (580)
T 3sqr_A 298 YTTDTLLIGIGQRYDVIVEANAAAD-NYWIRGNWGTTCSTNNEAANATGILRYDSSSIA----NPT-SVGTTPRGTCEDE 371 (580)
T ss_dssp EEESSEEECTTCEEEEEEECCSCSS-EEEEECCCCTTTSCBTTGGGCEEEEESSTTCCC----CCC-CCCCCCCCCSCCS
T ss_pred eEeeEEEEccceEEEEEEEeCCCCC-eEEEEEecccccCccCCCCceEEEEEECCCCCC----CCC-CCCCCccchhhcc
Confidence 9999999999999999999998888 999999876433211234578999999865321 121 1110111001110
Q ss_pred ccccccCCCCCCCCCCCCCCCCCCccccceEEEEecCCCcccCCeEEEEEcCeecc-CCCCchhhhcccCCCcccccCCC
Q 012225 342 PRSIRQNTSASGARPNPQGSFHYGSINITDTYVLRSLPPVTIDGKVRSTLNGISFV-KPETPIRLADKYNVKGAYKLDFP 420 (468)
Q Consensus 342 ~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~i~l~~~~~~~~~g~~~~~iN~~s~~-~p~~P~l~~~~~~~~~~~~~~~~ 420 (468)
....|.+..+.+.|. ..+.++.+.. ..++..+|+|||++|. .+++|+|++.+.+ . .++
T Consensus 372 ---~~~~L~P~~~~~~~~--------~~~~~~~l~~----~~~~~~~w~iN~~s~~~~~~~P~L~~~~~g---~--~~~- 430 (580)
T 3sqr_A 372 ---PVASLVPHLALDVGG--------YSLVDEQVSS----AFTNYFTWTINSSSLLLDWSSPTTLKIFNN---E--TIF- 430 (580)
T ss_dssp ---CGGGCCBSSCCBCCS--------EEEEEEEEEE----EESSSEEEEETTBCCCCCTTSCHHHHHHTT---C--CCC-
T ss_pred ---cccccccCCCCCCCC--------ccceEEEEEe----ccCCceeEEECCEecccCCCCCchhhhhcC---C--ccC-
Confidence 001232222222221 2334444433 1345789999999997 5788998765421 1 111
Q ss_pred CCCCCCCCCcceEEEEec----CCcEEEEEEecCC--CCCCceeccCCCceeeC
Q 012225 421 NKPLTRPPRTDRSLINAT----YKGFIEIILQNND--TKMQSFHMDGYSFFVVG 468 (468)
Q Consensus 421 ~~p~~~~~~~~~~~~~~~----~g~~Veivi~N~~--~~~HP~HLHGh~F~Vlg 468 (468)
|. ..+++.++ .|+||||||+|.+ .+.||||||||+|||||
T Consensus 431 --~~------~~~~~~~~~~~~~~~~VeiVi~n~~~~~~~HP~HLHGh~F~vv~ 476 (580)
T 3sqr_A 431 --PT------EYNVVALEQTNANEEWVVYVIEDLTGFGIWHPIHLHGHDFFIVA 476 (580)
T ss_dssp --CG------GGCEEEECC----CCEEEEEEEECSSSCCCEEEEESSCCEEEEE
T ss_pred --CC------CcceeecccccCCCcEEEEEEeCCCccccceeeEecCceEEEEe
Confidence 21 23455554 5999999999998 78999999999999986
No 3
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=100.00 E-value=2.8e-80 Score=646.25 Aligned_cols=398 Identities=24% Similarity=0.402 Sum_probs=305.4
Q ss_pred EEEEEEEEEEEECCCCceEEEEEEcCcCCCceEEEecCCEEEEEEEeCCCC-----CceeecCcccCCCCCCCCCCCC-C
Q 012225 31 IFYDFKVSYITASPLGVPQQVIAINGKFPGAVLNATTNNNIVINVQNDLDE-----SLLMTWPGIQMRRNSWQDGVQG-T 104 (468)
Q Consensus 31 ~~~~l~~~~~~~~~dG~~~~~~~~Ng~~PgP~i~~~~Gd~v~v~v~N~l~~-----~~siH~HG~~~~~~~~~DGv~~-t 104 (468)
.+|+|+|++..+++||+.|.+|+|||++|||+||+++||+|+|+|+|++++ ++||||||++|+.++|+||+++ |
T Consensus 5 ~~~~l~i~~~~~~pdg~~~~~~~~NG~~PGP~I~~~~GD~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vt 84 (495)
T 3t6v_A 5 PVTDLHIVNADIVPDGFVRPAVNAGGTFPGPVIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTNWADGPAFIT 84 (495)
T ss_dssp SEEEEEEEEEEECTTSCCEEEEEETTSSSCCEEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTT
T ss_pred CeEEEEEEEEEEcCCCceEEEEEECCcccCCeEEEECCcEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCccc
Confidence 589999999999999999999999999999999999999999999999985 7999999999999999999998 9
Q ss_pred CCCcCCCCceEEEEEeCCCceeeEEeeCccccccCCeeecEEEecCCCC-CCCCCCCCCcEEEEEeeeeecchHHHHHHh
Q 012225 105 NCPIPSQWNWTYQFQVKDQIGSFFYFPSLNLQRVSGGFGPVIINNRKVI-PIPFDQPEGDIIFLIGDWYTRNHTALRTAL 183 (468)
Q Consensus 105 q~~I~PG~~~~y~f~~~~~~Gt~wyH~H~~~q~~~Gl~G~liV~~~~~~-~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~ 183 (468)
||||+||++|+|+|++++++||||||||.+.|+.+||+|+|||+++... ..+|+.+++|++|+|+||+++....+
T Consensus 85 q~pI~PG~sftY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~---- 160 (495)
T 3t6v_A 85 QCPIIVGNSFSYNFNVPGMAGTYWYHSHLTTQYCDGLRGPFVVYDPNDPDANLYDVDDDTTIITLADWYHVLAKEM---- 160 (495)
T ss_dssp BCCBCTTCEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCGGGS----
T ss_pred cCCCCCCCeEEEEEEeCCCCceeeeeccchhHHhcCceEEEEEcCccccccccCCCCCceeEEEEecccCCchhhh----
Confidence 9999999999999999778999999999999999999999999986541 12343445678999999999876432
Q ss_pred hcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceEEEEcCCCEEEEEEEEcCCCCeeeEEEeCCeeEEEEeeCcccccee
Q 012225 184 DSGKDLDMPDGVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYTSQQN 263 (468)
Q Consensus 184 ~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~Via~DG~~~~p~~ 263 (468)
.+.....+++++|||++.+.|.. .....+.++|++|++|||||||+|..+.+.|+|+||+|+|||+||.+++|+.
T Consensus 161 -~~~~p~~~d~~liNG~g~~~~~~----~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~via~DG~~~~P~~ 235 (495)
T 3t6v_A 161 -GAGGAITADSTLIDGLGRTHVNV----AAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTIIETDGVDSQELT 235 (495)
T ss_dssp -CSSSCCCCSEEEETTBCCBSSSC----CCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEE
T ss_pred -ccCCCCCCcEEEECCcCcCCCCc----ccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEeCCcccCCEE
Confidence 12223478999999998766521 1234578999999999999999999999999999999999999999999999
Q ss_pred eceEEEcCCceEEEEEEecCCCCcceEEEEEecccccccccccceEEEEEEcCCCCCCCCCCCCCCCCCcccccccCCcc
Q 012225 264 YTSFEIHVGQSYSFLVTMDQNASSDYYIVASARFVNESFWQRVTGVAILHYSNSKGAASGPLPEAPSDIYNQWAAMTQPR 343 (468)
Q Consensus 264 ~d~i~l~pGqR~dv~v~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~~p~~~~~~~~~~~~~ 343 (468)
++++.|+|||||||+|++++++| +|||++.+...+.. ..+....|+|+|+++.... +... .+.. . ...+
T Consensus 236 ~~~l~i~pGqR~dvlv~~~~~~g-~y~i~a~~~~~~~~-~~~~~~~ail~Y~~~~~~~--p~~~-~~~~-~----~~~~- 304 (495)
T 3t6v_A 236 VDEIQIFAAQRYSFVLNANQPVG-NYWIRANPNSGGEG-FDGGINSAILRYDGATTAD--PVTV-ASTV-H----TKCL- 304 (495)
T ss_dssp ESBEEECTTCEEEEEEECCSCSS-EEEEEEEESSSSCS-CGGGTTEEEEEETTSCSSC--CCCC-CCSS-C----SSBC-
T ss_pred eeeEEEcCceEEEEEEECCCCCc-eEEEEEecccCccc-cCCCceEEEEEECCCCCCC--CCCC-CCCC-C----cccc-
Confidence 99999999999999999998878 99999986543221 1123457999998754221 1111 0100 0 0000
Q ss_pred ccccCCCCCCCCCCCCCCCCCCccccceEEEEecCCCcccCCeEEEEEcCeeccCCCCchhhhcccCCCcccccCCCCCC
Q 012225 344 SIRQNTSASGARPNPQGSFHYGSINITDTYVLRSLPPVTIDGKVRSTLNGISFVKPETPIRLADKYNVKGAYKLDFPNKP 423 (468)
Q Consensus 344 ~~~~~l~~~~~~~~p~~~~~~~~~~~~~~i~l~~~~~~~~~g~~~~~iN~~s~~~p~~P~l~~~~~~~~~~~~~~~~~~p 423 (468)
.+.+|.+....+.|... ....+++++.+... .++ .+|+|||++|..|+.|+|++... +.+.. .+
T Consensus 305 -~~~~L~p~~~~~~p~~~---~~~~~d~~~~l~~~----~~~-~~w~iNg~s~~~~~~P~L~~~~~---g~~~~--~~-- 368 (495)
T 3t6v_A 305 -IETDLHPLSRNGVPGNP---HQGGADCNLNLSLG----FAC-GNFVINGVSFTPPTVPVLLQICS---GANTA--AD-- 368 (495)
T ss_dssp -CGGGCCBSSCCCCSSCS---STTCSSEEEECCEE----EET-TEEEETTBCCCCCSSCHHHHHHT---TCCSS--TT--
T ss_pred -ccccccccccccCCCcc---CCCCCcEEEEEEEE----ecC-cEEEEcCEecCCCCCcchhhhhc---CCcCc--cc--
Confidence 01122222111111100 01235666666542 122 27999999999899999887642 22211 01
Q ss_pred CCCCCCcceEEEEecCCcEEEEEEe-cCCCCCCceeccCCCceeeC
Q 012225 424 LTRPPRTDRSLINATYKGFIEIILQ-NNDTKMQSFHMDGYSFFVVG 468 (468)
Q Consensus 424 ~~~~~~~~~~~~~~~~g~~Veivi~-N~~~~~HP~HLHGh~F~Vlg 468 (468)
......++.++.|++|||+|+ |.+.+.||||||||+|||||
T Consensus 369 ----~~~~~~v~~~~~g~~V~ivl~~n~~~~~HP~HLHGh~F~vl~ 410 (495)
T 3t6v_A 369 ----LLPSGSVISLPSNSTIEIALPAGAAGGPHPFHLHGHDFAVSE 410 (495)
T ss_dssp ----SSSTTSEEEECTTCEEEEEEECCSSSCCCEEEETTCCEEEEE
T ss_pred ----ccCCcceEEecCCCEEEEEEccCCCCCCcceeecCCcEEEEe
Confidence 111335788999999999998 67788999999999999985
No 4
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=100.00 E-value=2.5e-80 Score=646.55 Aligned_cols=395 Identities=26% Similarity=0.427 Sum_probs=305.2
Q ss_pred EEEEEEEEEEEECCCCceEEEEEEcCcCCCceEEEecCCEEEEEEEeCCCC-----CceeecCcccCCCCCCCCCCCC-C
Q 012225 31 IFYDFKVSYITASPLGVPQQVIAINGKFPGAVLNATTNNNIVINVQNDLDE-----SLLMTWPGIQMRRNSWQDGVQG-T 104 (468)
Q Consensus 31 ~~~~l~~~~~~~~~dG~~~~~~~~Ng~~PgP~i~~~~Gd~v~v~v~N~l~~-----~~siH~HG~~~~~~~~~DGv~~-t 104 (468)
.+|+|+|++..+++||+.+.+|+|||++|||+||+++||+|+|+|+|++++ ++||||||++|+.++++||+++ |
T Consensus 4 ~~~~l~v~~~~~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vt 83 (499)
T 3pxl_A 4 PVADLTITDAAVSPDGFSRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPAFIN 83 (499)
T ss_dssp SEEEEEEEEEEECTTSCCEEEEEETTBSSCCCEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTT
T ss_pred ceEEEEEEEEEEcCCCcEEEEEEECCcccCCeEEEeCCCEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCccc
Confidence 589999999999999999999999999999999999999999999999984 7999999999999999999998 9
Q ss_pred CCCcCCCCceEEEEEeCCCceeeEEeeCccccccCCeeecEEEecCCC-CCCCCCCCCCcEEEEEeeeeecchHHHHHHh
Q 012225 105 NCPIPSQWNWTYQFQVKDQIGSFFYFPSLNLQRVSGGFGPVIINNRKV-IPIPFDQPEGDIIFLIGDWYTRNHTALRTAL 183 (468)
Q Consensus 105 q~~I~PG~~~~y~f~~~~~~Gt~wyH~H~~~q~~~Gl~G~liV~~~~~-~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~ 183 (468)
||||+||++|+|+|++++++||||||||.+.|+.+||+|+|||+++.. ...+|+.+++|++|+|+||+++....
T Consensus 84 q~pI~PG~s~tY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~~~~l~l~Dw~~~~~~~----- 158 (499)
T 3pxl_A 84 QCPISPGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPHASRYDVDNDDTVITLADWYHTAAKL----- 158 (499)
T ss_dssp BCCBCTTCEEEEEEECSSCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCTTT-----
T ss_pred cCCCCCCCeEEEEEEcCCCCceeeeeccchhHHhccceeEEEEcCCcccccccCCCCCceEEEEEEcccCCcccc-----
Confidence 999999999999999977899999999999999999999999998653 11234344567899999999986532
Q ss_pred hcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceEEEEcCCCEEEEEEEEcCCCCeeeEEEeCCeeEEEEeeCcccccee
Q 012225 184 DSGKDLDMPDGVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYTSQQN 263 (468)
Q Consensus 184 ~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~Via~DG~~~~p~~ 263 (468)
.+.....+++++|||++.+.|. .....+.++|++|++|||||||+|..+.+.|+|+||+|+|||+||.+++|+.
T Consensus 159 -~~~~p~~~d~~liNG~~~~~~~-----~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~via~DG~~~~P~~ 232 (499)
T 3pxl_A 159 -GPRFPGGADATLINGKGRAPSD-----SVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLE 232 (499)
T ss_dssp -SCSSCSSCSEEEETTBCCCTTC-----TTCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEE
T ss_pred -ccCCCCCCcEEEECCCCcCCCC-----CCCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEECCcccCceE
Confidence 1222347899999999876652 2234588999999999999999999999999999999999999999999999
Q ss_pred eceEEEcCCceEEEEEEecCCCCcceEEEEEecccccccccccceEEEEEEcCCCCCCCCCCCCCCCCCcccccccCCcc
Q 012225 264 YTSFEIHVGQSYSFLVTMDQNASSDYYIVASARFVNESFWQRVTGVAILHYSNSKGAASGPLPEAPSDIYNQWAAMTQPR 343 (468)
Q Consensus 264 ~d~i~l~pGqR~dv~v~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~~p~~~~~~~~~~~~~ 343 (468)
++++.|+|||||||+|++++++| +|||++.+...+.. ..+....|+|+|+++....+. .+. .+. . ..+
T Consensus 233 ~~~l~i~pGqR~dvlv~~~~~~g-~y~i~a~~~~~~~~-~~~~~~~ail~Y~~~~~~~p~-~~~-~~~---~----~~~- 300 (499)
T 3pxl_A 233 VDSIQIFAAQRYSFVLDANQAVD-NYWIRANPNFGNVG-FDGGINSAILRYDGAPAVEPT-TNQ-TTS---V----KPL- 300 (499)
T ss_dssp ESBEEECTTCEEEEEEECCSCSS-EEEEEEEESSSSCS-CGGGTTEEEEEETTSCSSCCC-CCC-CCC---S----SBC-
T ss_pred eeeEEECCCcEEEEEEECCCCCc-eEEEEEecccCccc-cCCCceEEEEEeCCCCCCCCC-CCC-CCC---C----ccc-
Confidence 99999999999999999998778 99999986543221 122345799999876422110 000 010 0 000
Q ss_pred ccccCCCCCCCCCCCCCCCCCCccccceEEEEecCCCcccCCeEEEEEcCeeccCCCCchhhhcccCCCcccccCCCCCC
Q 012225 344 SIRQNTSASGARPNPQGSFHYGSINITDTYVLRSLPPVTIDGKVRSTLNGISFVKPETPIRLADKYNVKGAYKLDFPNKP 423 (468)
Q Consensus 344 ~~~~~l~~~~~~~~p~~~~~~~~~~~~~~i~l~~~~~~~~~g~~~~~iN~~s~~~p~~P~l~~~~~~~~~~~~~~~~~~p 423 (468)
.+.+|.+....+.|... ....+|+++.+... ..+ .+|+|||++|..|+.|+|++... +.+.. .+
T Consensus 301 -~~~~L~p~~~~~~p~~~---~~~~~d~~~~l~~~----~~~-~~w~iNg~s~~~~~~P~L~~~~~---g~~~~--~~-- 364 (499)
T 3pxl_A 301 -NEVDLHPLVSTPVPGAP---SSGGVDKAINMAFN----FNG-SNFFINGASFVPPTVPVLLQILS---GAQTA--QD-- 364 (499)
T ss_dssp -CGGGCCBSSCCCCSSCS---STTCSSEEEECCEE----ECS-SCEEETTBCCCCCSSCHHHHHHT---TCCST--TT--
T ss_pred -ccccccccccccCCCcc---cCCCCcEEEEEEEE----ecC-cEEEEcCEecCCCCCchhhhhhc---CCccc--cc--
Confidence 01122222111112100 01245677766542 222 37999999999999999887642 22111 00
Q ss_pred CCCCCCcceEEEEecCCcEEEEEEe---cCCCCCCceeccCCCceeeC
Q 012225 424 LTRPPRTDRSLINATYKGFIEIILQ---NNDTKMQSFHMDGYSFFVVG 468 (468)
Q Consensus 424 ~~~~~~~~~~~~~~~~g~~Veivi~---N~~~~~HP~HLHGh~F~Vlg 468 (468)
......++.++.|++|||+|+ |.+.+.||||||||+|||||
T Consensus 365 ----~~~~~~v~~~~~g~~V~ivl~~~~n~~~~~HP~HLHGh~F~Vl~ 408 (499)
T 3pxl_A 365 ----LLPSGSVYVLPSNASIEISFPATAAAPGAPHPFHLHGHTFAVVR 408 (499)
T ss_dssp ----SSSTTSEEEECTTCEEEEEEECCTTSCSCSCEEEETTCCEEEEE
T ss_pred ----cCCCceeEEecCCCEEEEEEecCcccCCCCccceecCCcEEEEe
Confidence 111345788999999999999 66678999999999999985
No 5
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3e-79 Score=645.52 Aligned_cols=395 Identities=20% Similarity=0.322 Sum_probs=310.6
Q ss_pred ccEEEEEEEEEEEECCCC-ceEEEEEEcCcCCCceEEEecCCEEEEEEEeCCC-CCceeecCcccCCCCCCCCCCCC-CC
Q 012225 29 DTIFYDFKVSYITASPLG-VPQQVIAINGKFPGAVLNATTNNNIVINVQNDLD-ESLLMTWPGIQMRRNSWQDGVQG-TN 105 (468)
Q Consensus 29 ~~~~~~l~~~~~~~~~dG-~~~~~~~~Ng~~PgP~i~~~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~~~DGv~~-tq 105 (468)
.+|+|+|+|++..+++|| +.+.+|+|||++|||+||+++||+|+|+|+|+|+ ++++|||||++|..++++||+++ ||
T Consensus 1 ~~~~~~~~v~~~~~~pdG~~~~~~~~~Ng~~PGP~i~~~~Gd~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~vtq 80 (534)
T 1zpu_A 1 ETHTFNWTTGWDYRNVDGLKSRPVITCNGQFPWPDITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGVPFLTQ 80 (534)
T ss_dssp CEEEEEEEEEEEEECSSSSCCEEEEEETTBSSCCCEEEETTCEEEEEEECCCSSCCBCCEEETCCCTTCGGGSCCBTTTB
T ss_pred CEEEEEEEEEEEEecCCCCceEEEEEECCccCCccEEEECCCEEEEEEEeCCCCCCeeEEcCCcccCCCCcccCCCcccc
Confidence 479999999999999999 7999999999999999999999999999999998 99999999999998899999998 99
Q ss_pred CCcCCCCceEEEEEeCCCceeeEEeeCccccccCCeeecEEEecCCCCCCCCCCCCCcEEEEEeeeeecchHHHHHHh-h
Q 012225 106 CPIPSQWNWTYQFQVKDQIGSFFYFPSLNLQRVSGGFGPVIINNRKVIPIPFDQPEGDIIFLIGDWYTRNHTALRTAL-D 184 (468)
Q Consensus 106 ~~I~PG~~~~y~f~~~~~~Gt~wyH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~-~ 184 (468)
|+|+||++|+|+|++++++||||||||.+.|+.+||+|+|||++++. |+ .+|+|++|+|+||+++...++...+ .
T Consensus 81 ~pI~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~---p~-~~d~e~~l~l~Dw~~~~~~~~~~~~~~ 156 (534)
T 1zpu_A 81 CPIAPGSTMLYNFTVDYNVGTYWYHSHTDGQYEDGMKGLFIIKDDSF---PY-DYDEELSLSLSEWYHDLVTDLTKSFMS 156 (534)
T ss_dssp CCBCTTCEEEEEEECSSCCEEEEEECCSSSGGGGTCEEEEEEECTTC---CS-CCSEEEEEEEEEECSSCHHHHHHHHSS
T ss_pred CCcCCCCeEEEEEEeCccceeEEEEEcCcccccCcceeeEEeCCCCC---CC-CCcceEEEEeeccccCCHHHHHHHHhc
Confidence 99999999999999976899999999999999999999999999753 33 4589999999999999887764432 2
Q ss_pred ---cCCCCCCCceEEEcCcCCCCCCCccCCCCCcceEEEEcCCCEEEEEEEEcCCCCeeeEEEeCCeeEEEEeeCccccc
Q 012225 185 ---SGKDLDMPDGVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYTSQ 261 (468)
Q Consensus 185 ---~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~Via~DG~~~~p 261 (468)
..+..+.++.+||||+.. +.++|++||+|||||||+|..+.+.|+|+||+|+|||+||.+++|
T Consensus 157 ~~~~~g~~~~~d~~liNG~~~--------------~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~P 222 (534)
T 1zpu_A 157 VYNPTGAEPIPQNLIVNNTMN--------------LTWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVVEIDGITTEK 222 (534)
T ss_dssp TTCTTCCCCCCSEEEETTBSS--------------CEEECCSSCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEE
T ss_pred cccCCCCCCCCceEEECCCCc--------------eEEEEECCCEEEEEEEeccCCceEEEEEcCCeeEEEeccCcCccc
Confidence 123346789999999985 889999999999999999999999999999999999999999999
Q ss_pred eeeceEEEcCCceEEEEEEecCCCCcceEEEEEeccccc---ccccccceEEEEEEcCCCCCCCCCCCCCCCCCcccccc
Q 012225 262 QNYTSFEIHVGQSYSFLVTMDQNASSDYYIVASARFVNE---SFWQRVTGVAILHYSNSKGAASGPLPEAPSDIYNQWAA 338 (468)
Q Consensus 262 ~~~d~i~l~pGqR~dv~v~~~~~~g~~y~i~~~~~~~~~---~~~~~~~~~ail~y~~~~~~~~~~~p~~~p~~~~~~~~ 338 (468)
..++.+.|+|||||||+|++++.++++|||++....... +........++|+|+++... |. .+........
T Consensus 223 ~~~~~l~l~~gqR~dvlv~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~-----p~-~~~~~~~~~~ 296 (534)
T 1zpu_A 223 NVTDMLYITVAQRYTVLVHTKNDTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAAL-----PT-QNYVDSIDNF 296 (534)
T ss_dssp EEESCEEECTTCEEEEEEECCSCSSCCEEEEEEECGGGSSSCCTTCCCEEEEEEESCTTSCB-----CC-CCCCSCSSCS
T ss_pred cEeceEEECccceEEEEEEcCCCCCCcEEEEEeccccccccCCCCCCcceEEEEEeCCCCCC-----CC-CCcccccccc
Confidence 999999999999999999998654339999987653211 11124567899999875321 11 1100000000
Q ss_pred cCCccccccCCCCCCCCCCCCCCCCCCccccceEEEEecCCCcccCCeEEEEEcCeeccCCCCchhhhcccCCCcccccC
Q 012225 339 MTQPRSIRQNTSASGARPNPQGSFHYGSINITDTYVLRSLPPVTIDGKVRSTLNGISFVKPETPIRLADKYNVKGAYKLD 418 (468)
Q Consensus 339 ~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~i~l~~~~~~~~~g~~~~~iN~~s~~~p~~P~l~~~~~~~~~~~~~~ 418 (468)
++ + ..+.+....+.+ ..+++++.+........++...|+|||++|..|++|+|++... .+.+.
T Consensus 297 ~~---~--~~l~p~~~~~~~--------~~~~~~~~l~~~~~~~~~~~~~~~iNg~s~~~~~~P~L~~~~~--~~~~~-- 359 (534)
T 1zpu_A 297 LD---D--FYLQPYEKEAIY--------GEPDHVITVDVVMDNLKNGVNYAFFNNITYTAPKVPTLMTVLS--SGDQA-- 359 (534)
T ss_dssp CC---G--GGCCBSSCCCCC--------CSCSEEEEEEEEEEECTTSCEEEEETTBCCCCCSSCHHHHHTT--SGGGT--
T ss_pred cc---c--ccceeCCCCCCC--------CCCCeEEEEEEEeeccCCceeEEEECCCcccCCCCCceeeecc--cCccc--
Confidence 10 0 111111111111 2466777776532111345678999999999999999876542 12111
Q ss_pred CCCCCCCCCCCcceEEEEecCCcEEEEEEecCCCCCCceeccCCCceeeC
Q 012225 419 FPNKPLTRPPRTDRSLINATYKGFIEIILQNNDTKMQSFHMDGYSFFVVG 468 (468)
Q Consensus 419 ~~~~p~~~~~~~~~~~~~~~~g~~Veivi~N~~~~~HP~HLHGh~F~Vlg 468 (468)
..+.. ...++.++.++.|++|||+|+|.+.+.||||||||+||||+
T Consensus 360 --~~~~~--~~~~~~~~~~~~g~~v~ivi~N~~~~~HP~HLHGh~F~Vl~ 405 (534)
T 1zpu_A 360 --NNSEI--YGSNTHTFILEKDEIVEIVLNNQDTGTHPFHLHGHAFQTIQ 405 (534)
T ss_dssp --TCGGG--GCSSSCEEEECTTCEEEEEEEECSSSCEEEEETTCCEEEEE
T ss_pred --CCCcc--cCCCceEEEeCCCCEEEEEEeCCCCCCCCeEecCCceEEEe
Confidence 11111 11235678899999999999999999999999999999985
No 6
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=100.00 E-value=2.3e-78 Score=638.00 Aligned_cols=402 Identities=23% Similarity=0.361 Sum_probs=304.2
Q ss_pred cCccEEEEEEEEEEEECCCCc-eEEEEEEcCcCCCceEEEecCCEEEEEEEeCCC-----CCceeecCcccCCCCCCCCC
Q 012225 27 EDDTIFYDFKVSYITASPLGV-PQQVIAINGKFPGAVLNATTNNNIVINVQNDLD-----ESLLMTWPGIQMRRNSWQDG 100 (468)
Q Consensus 27 ~~~~~~~~l~~~~~~~~~dG~-~~~~~~~Ng~~PgP~i~~~~Gd~v~v~v~N~l~-----~~~siH~HG~~~~~~~~~DG 100 (468)
++.+++|+|++++..+++||+ .+.+|+|||++|||+||+++||+|+|+|+|+++ ++++|||||+++++++++||
T Consensus 20 ~~~~~~~~l~i~~~~~~~dg~~~~~~~~~NG~~PGP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DG 99 (521)
T 1v10_A 20 LAATVALDLHILNANLDPDGTGARSAVTAEGTTIAPLITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQAGTTEMDG 99 (521)
T ss_dssp --CCSEEEEEEEEEEECTTSSCCEEEEEESSSSSCCCEEEETTCEEEEEEEECCCCTTSCCCBCEEEETCCCTTCGGGSC
T ss_pred cccCceEEEEEEEEEEcCCCcceEEEEEECCccCCCcEEEeCCCEEEEEEEECCCCccCCCCceEecCCeeccCCCccCC
Confidence 344578999999999999999 999999999999999999999999999999999 99999999999988899999
Q ss_pred CCC-CCCCcCCCCceEEEEEeCCCceeeEEeeCccccccCCeeecEEEecCCCC-CCCCCCCCCcEEEEEeeeeecchHH
Q 012225 101 VQG-TNCPIPSQWNWTYQFQVKDQIGSFFYFPSLNLQRVSGGFGPVIINNRKVI-PIPFDQPEGDIIFLIGDWYTRNHTA 178 (468)
Q Consensus 101 v~~-tq~~I~PG~~~~y~f~~~~~~Gt~wyH~H~~~q~~~Gl~G~liV~~~~~~-~~~~~~~~~e~~l~l~d~~~~~~~~ 178 (468)
+++ |||+|+||++|+|+|++++++||||||||.+.|+.+||+|+|||++++.. +.+|+.+++|++|+|+||+++...+
T Consensus 100 v~~vtq~~I~PG~s~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~~e~~l~l~D~~~~~~~~ 179 (521)
T 1v10_A 100 PAFVNQCPIIPNESFVYDFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDPNDPHLSLYDVDDASTVITIADWYHSLSTV 179 (521)
T ss_dssp CBTTTBCCBCTTEEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCCC-
T ss_pred CcceeeCCcCCCCeEEEEEecCCCCccEEEEeccCCchhcCceEEEEEcCCcccccccCCCCCceeEEEEcccccCCHHH
Confidence 998 99999999999999997678999999999999999999999999986531 2234333579999999999987766
Q ss_pred HHHHhhcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceEEEEcCCCEEEEEEEEcCCCCeeeEEEeCCeeEEEEeeCcc
Q 012225 179 LRTALDSGKDLDMPDGVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHY 258 (468)
Q Consensus 179 ~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~Via~DG~~ 258 (468)
+.. ..+...+.++.++|||+..+.|.. .....+.++|++|++|||||||+|..+.+.|+|+||+|+||++||.+
T Consensus 180 ~~~--~~~~~~~~~d~~liNG~~~~~~~~----~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~ 253 (521)
T 1v10_A 180 LFP--NPNKAPPAPDTTLINGLGRNSANP----SAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIEVDGVS 253 (521)
T ss_dssp --------CCCSCCSEEEETTBCCCSSCG----GGSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEE
T ss_pred Hhh--ccCCCCCCCCEEEECCcccCCCCC----CCCCceEEEECCCCEEEEEEEecCCcccEEEEECCCeEEEEecCCcc
Confidence 532 222335668999999999876631 12234889999999999999999999999999999999999999999
Q ss_pred ccceeeceEEEcCCceEEEEEEecCCCCcceEEEEEecccccccccccceEEEEEEcCCCCCCCCCCCCCCCCCcccccc
Q 012225 259 TSQQNYTSFEIHVGQSYSFLVTMDQNASSDYYIVASARFVNESFWQRVTGVAILHYSNSKGAASGPLPEAPSDIYNQWAA 338 (468)
Q Consensus 259 ~~p~~~d~i~l~pGqR~dv~v~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~~p~~~~~~~~ 338 (468)
++|+.++++.|+|||||||+|++++++| +|||++........ .......++|+|+++.... |. .+..... .
T Consensus 254 ~~p~~~~~l~l~pgqR~dvlv~~~~~~g-~y~i~~~~~~~~~~-~~~~~~~ail~y~~~~~~~----p~-~~~~~~~--~ 324 (521)
T 1v10_A 254 HQPLTVDSLTIFAGQRYSVVVEANQAVG-NYWIRANPSNGRNG-FTGGINSAIFRYQGAAVAE----PT-TSQNSGT--A 324 (521)
T ss_dssp EEEEEESBEEECTTCEEEEEEECCSCSS-EEEEEEEESSSSCS-CGGGTTEEEEEETTCCSCC----CC-CCCCCSC--B
T ss_pred ccceeeeeEEEcccceEEEEEEcCCCCC-ceeeeecccccccc-CCCCceeEEEEECCCCCCC----CC-CCCCccc--c
Confidence 9999999999999999999999998778 99999976643211 1112346999998764321 11 0100000 0
Q ss_pred cCCccccccCCCCCCCCCCCCCCCCCCccccceEEEEecCCCcccCC-eEEEEEcCeeccCCCCchhhhcccCCCccccc
Q 012225 339 MTQPRSIRQNTSASGARPNPQGSFHYGSINITDTYVLRSLPPVTIDG-KVRSTLNGISFVKPETPIRLADKYNVKGAYKL 417 (468)
Q Consensus 339 ~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~i~l~~~~~~~~~g-~~~~~iN~~s~~~p~~P~l~~~~~~~~~~~~~ 417 (468)
+. +.++.+....+.|.... ....++++.+... .++ ..+|+|||++|..+..|+|++... +.+..
T Consensus 325 ~~-----~~~l~p~~~~~~p~~~~---~~~~~~~~~l~~~----~~~~~~~~~iNg~~~~~~~~P~l~~~~~---g~~~~ 389 (521)
T 1v10_A 325 LN-----EANLIPLINPGAPGNPV---PGGADINLNLRIG----RNATTADFTINGAPFIPPTVPVLLQILS---GVTNP 389 (521)
T ss_dssp CC-----GGGCCBSSCCCCSSCSS---TTCSSEEEECCEE----CCSSSSCCEESSCCCCCCSSCHHHHHHH---TCCCG
T ss_pred cc-----hhhcccCCcccCCCccc---CCcceEEEEEEEe----cCCceeEEEECCCcccCCCCchhhhhhc---CCccc
Confidence 00 01122211111221100 0134555655431 122 247999999998888898876542 21111
Q ss_pred CCCCCCCCCCCCcceEEEEecCCcEEEEEEecCCCCCCceeccCCCceeeC
Q 012225 418 DFPNKPLTRPPRTDRSLINATYKGFIEIILQNNDTKMQSFHMDGYSFFVVG 468 (468)
Q Consensus 418 ~~~~~p~~~~~~~~~~~~~~~~g~~Veivi~N~~~~~HP~HLHGh~F~Vlg 468 (468)
. ..+.+..++.++.|++|||+++| .+.||||||||+||||+
T Consensus 390 ~--------~~~~~~~~~~v~~g~~vei~l~N--~~~HP~HLHGh~F~Vl~ 430 (521)
T 1v10_A 390 N--------DLLPGGAVISLPANQVIEISIPG--GGNHPFHLHGHNFDVVR 430 (521)
T ss_dssp G--------GSSSTTTEEEECTTCEEEEEEEC--CBSCEEEESSCCEEEEE
T ss_pred c--------cCCCCceEEEecCCCEEEEEEcC--CCCCCEEEccceEEEEe
Confidence 0 11124567889999999999999 78999999999999985
No 7
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=100.00 E-value=1e-75 Score=615.70 Aligned_cols=393 Identities=25% Similarity=0.454 Sum_probs=300.5
Q ss_pred EEEEEEEEEEECCCCceEEEEEEcCcCCCceEEEecCCEEEEEEEeCCC-----CCceeecCcccCCCCCCCCCCCC-CC
Q 012225 32 FYDFKVSYITASPLGVPQQVIAINGKFPGAVLNATTNNNIVINVQNDLD-----ESLLMTWPGIQMRRNSWQDGVQG-TN 105 (468)
Q Consensus 32 ~~~l~~~~~~~~~dG~~~~~~~~Ng~~PgP~i~~~~Gd~v~v~v~N~l~-----~~~siH~HG~~~~~~~~~DGv~~-tq 105 (468)
+|+|++++..+++||+.+.+|+|||++ ||+||+++||+|+|+|+|+|+ ++++|||||+++++++++||+++ ||
T Consensus 6 ~~~l~i~~~~~~~~g~~~~~~~~NG~~-GP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHG~~~~~~~~~DGv~~vtq 84 (503)
T 1hfu_A 6 VDTMTLTNANVSPDGFTRAGILVNGVH-GPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADGVNQ 84 (503)
T ss_dssp EEEEEEEEEEECTTSCCEEEEEETTBS-SCEEEEETTCCEEEEEEECCCCTTSCCSBCEEEETCCCTTCGGGSCCBTTTB
T ss_pred eEEEEEEEEEECCCCeEEEEEEECCcc-CCcEEEeCCCEEEEEEEeCCCCccCCCcccEeccceeccCCCccCCCccccc
Confidence 799999999999999999999999999 999999999999999999999 99999999999988899999998 99
Q ss_pred CCcCCCCceEEEEEeCCCceeeEEeeCccccccCCeeecEEEecCCC-CCCCCCCCCCcEEEEEeeeeecchHHHHHHhh
Q 012225 106 CPIPSQWNWTYQFQVKDQIGSFFYFPSLNLQRVSGGFGPVIINNRKV-IPIPFDQPEGDIIFLIGDWYTRNHTALRTALD 184 (468)
Q Consensus 106 ~~I~PG~~~~y~f~~~~~~Gt~wyH~H~~~q~~~Gl~G~liV~~~~~-~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~ 184 (468)
|+|+||++|+|+|++++++||||||||.+.|+.+||+|+|||+++.. .+.+|+.+++|++|+|+||+++...++.
T Consensus 85 ~~I~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~~---- 160 (503)
T 1hfu_A 85 CPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDDNDPHAALYDEDDENTIITLADWYHIPAPSIQ---- 160 (503)
T ss_dssp CCBCTTCEEEEEECCTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSTTSEEEEEEECSSCGGGCC----
T ss_pred CCcCCCCeEEEEEEeCCCCccEEEEecchhhhhCcceeeEEEcCCCCCcccCCCCCCceEEEEEcccccCChHHhc----
Confidence 99999999999999767899999999999999999999999998653 1223433347999999999998765532
Q ss_pred cCCCCCCCceEEEcCcCCCCCCCccCCCCCcceEEEEcCCCEEEEEEEEcCCCCeeeEEEeCCeeEEEEeeCccccceee
Q 012225 185 SGKDLDMPDGVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYTSQQNY 264 (468)
Q Consensus 185 ~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~Via~DG~~~~p~~~ 264 (468)
..+.++.++|||+..+.|.. .+..+.++|++|++|||||||+|..+.+.|+|+||+|+|||+||.+++|+.+
T Consensus 161 ---~~~~~d~~liNG~~~~~~~~-----~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~p~~~ 232 (503)
T 1hfu_A 161 ---GAAQPDATLINGKGRYVGGP-----AAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTV 232 (503)
T ss_dssp ------CCSEEEETTBCCBTTCC-----CCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEE
T ss_pred ---CCCCCCEEEECcccccCCCC-----CCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEEEeccCcccccccc
Confidence 12468999999999876632 2345899999999999999999999999999999999999999999999999
Q ss_pred ceEEEcCCceEEEEEEecCCCCcceEEEEEecccccc---cccccceEEEEEEcCCCCCCCCCCCCCCCCCcccccccCC
Q 012225 265 TSFEIHVGQSYSFLVTMDQNASSDYYIVASARFVNES---FWQRVTGVAILHYSNSKGAASGPLPEAPSDIYNQWAAMTQ 341 (468)
Q Consensus 265 d~i~l~pGqR~dv~v~~~~~~g~~y~i~~~~~~~~~~---~~~~~~~~ail~y~~~~~~~~~~~p~~~p~~~~~~~~~~~ 341 (468)
+++.|+|||||||+|++++++| +|||++........ ........++|+|+++....+.. +. .|. .. .++.
T Consensus 233 ~~l~l~pgeR~dvlv~~~~~~g-~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~-~~-~~~--~~--~l~~ 305 (503)
T 1hfu_A 233 DRLQIFTGQRYSFVLDANQPVD-NYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTT-SA-NPN--PA--QLNE 305 (503)
T ss_dssp SBEEECTTCEEEEEEECCSCSS-EEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCSSCCCC-CC-CSS--CC--BCCG
T ss_pred CeEEEcccceEEEEEEcCCCcc-ceeeeeccccCCcccccccCCCceEEEEEECCCCCCCCCC-CC-CCc--cC--CCcc
Confidence 9999999999999999998778 99999976532211 01122347999998754321100 00 111 00 1110
Q ss_pred ccccccCCCCCCCCCCCCCCCCCCccccceEEEEecCCCcccCCeEEEEEcCeeccCCCCchhhhcccCCCcccccCCCC
Q 012225 342 PRSIRQNTSASGARPNPQGSFHYGSINITDTYVLRSLPPVTIDGKVRSTLNGISFVKPETPIRLADKYNVKGAYKLDFPN 421 (468)
Q Consensus 342 ~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~i~l~~~~~~~~~g~~~~~iN~~s~~~p~~P~l~~~~~~~~~~~~~~~~~ 421 (468)
.++.+....+.|.... ....++++.+... .++. .|+|||++|..+..|+|++... +.+..
T Consensus 306 -----~~l~p~~~~~~p~~~~---~~~~~~~~~l~~~----~~~~-~~~iNg~~~~~~~~P~l~~~~~---g~~~~---- 365 (503)
T 1hfu_A 306 -----ADLHALIDPAAPGIPT---PGAADVNLRFQLG----FSGG-RFTINGTAYESPSVPTLLQIMS---GAQSA---- 365 (503)
T ss_dssp -----GGCBBSSSCSCSSCSS---TTCSSEEEECCEE----EETT-EEEETTBCCCCCSSCHHHHHHT---TCCSG----
T ss_pred -----ccccccCccCCCCccc---CCcceEEEEEEee----ccCc-eEEECCCccCCCCCcchhhhhc---CCccc----
Confidence 1121111111221100 0134455544321 1222 7999999998888898876542 22111
Q ss_pred CCCCCCCCcceEEEEecCCcEEEEEEec-CCCCCCceeccCCCceeeC
Q 012225 422 KPLTRPPRTDRSLINATYKGFIEIILQN-NDTKMQSFHMDGYSFFVVG 468 (468)
Q Consensus 422 ~p~~~~~~~~~~~~~~~~g~~Veivi~N-~~~~~HP~HLHGh~F~Vlg 468 (468)
...+.+..++.++.|++|||+++| .+.+.||||||||+||||+
T Consensus 366 ----~~~~~~~~~~~v~~g~~vei~l~~n~~~~~HP~HLHGh~F~Vl~ 409 (503)
T 1hfu_A 366 ----NDLLPAGSVYELPRNQVVELVVPAGVLGGPHPFHLHGHAFSVVR 409 (503)
T ss_dssp ----GGSSSTTSEEEECSSCEEEEEEECCSTTCCCEEEETTCCEEEEE
T ss_pred ----ccCCCCceEEEccCCCEEEEEEECCCCCCCCCEEEecceEEEEe
Confidence 011224577889999999999995 5578999999999999985
No 8
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=100.00 E-value=1.7e-74 Score=612.91 Aligned_cols=399 Identities=23% Similarity=0.362 Sum_probs=304.3
Q ss_pred cCccEEEEEEEEEEE--ECCCCce-EEEEEEcCcCCCceEEEecCCEEEEEEEeCC-CCCceeecCcccCCCCCCCCCCC
Q 012225 27 EDDTIFYDFKVSYIT--ASPLGVP-QQVIAINGKFPGAVLNATTNNNIVINVQNDL-DESLLMTWPGIQMRRNSWQDGVQ 102 (468)
Q Consensus 27 ~~~~~~~~l~~~~~~--~~~dG~~-~~~~~~Ng~~PgP~i~~~~Gd~v~v~v~N~l-~~~~siH~HG~~~~~~~~~DGv~ 102 (468)
.+.+++|+|++++.. +.+||+. +.+|+|||++|||+||+++||+|+|+|+|++ +++++|||||+++.+++++||++
T Consensus 30 ~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~Ng~~PGP~i~~~~GD~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~ 109 (559)
T 2q9o_A 30 TGVTQSYVFNLTEVDNWMGPDGVVKEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDGAN 109 (559)
T ss_dssp CCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTBSSCCCEEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSCCB
T ss_pred CCeEEEEEEEEEEeEeeECCCCccceEEEEECCcccCCcEEEeCCCEEEEEEEeCCCCCCceEEcCCCccCCCCCcCCCC
Confidence 455799999999999 9999999 9999999999999999999999999999999 68999999999998889999999
Q ss_pred C-CCCCcCC-CCceEEEEEeCCCceeeEEeeCccccccCCeeecEEEecCCCCCCCCCCCCCcE-EEEEeeeeecchHHH
Q 012225 103 G-TNCPIPS-QWNWTYQFQVKDQIGSFFYFPSLNLQRVSGGFGPVIINNRKVIPIPFDQPEGDI-IFLIGDWYTRNHTAL 179 (468)
Q Consensus 103 ~-tq~~I~P-G~~~~y~f~~~~~~Gt~wyH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~-~l~l~d~~~~~~~~~ 179 (468)
+ |||+|+| |++|+|+|++ +++||||||||.+.|+.+||+|+|||++++. .+ +|+|. +|+|+||+++...++
T Consensus 110 ~~tq~~I~P~G~~~~Y~f~~-~q~GT~wYH~H~~~q~~~Gl~G~liV~~~~~--~~---~d~d~~~l~l~Dw~~~~~~~~ 183 (559)
T 2q9o_A 110 GVTECPIPPKGGQRTYRWRA-RQYGTSWYHSHFSAQYGNGVVGTIQINGPAS--LP---YDIDLGVFPITDYYYRAADDL 183 (559)
T ss_dssp TTTBCCBCTTTEEEEEEEEC-CSCEEEEEEECSTTGGGGTCEEEEEEECCCS--SC---CSEEEEEEEEEEECSSCHHHH
T ss_pred ccccCccCCCCCeEEEEEEC-CCCEEEEEEEcccchhcCCceEEEEecCCCc--CC---CcccceEEEEeccccCCHHHH
Confidence 8 9999999 9999999999 4899999999999999999999999998753 23 48887 999999999987766
Q ss_pred HHHhhcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceEEEEcCCCEEEEEEEEcCCCCeeeEEEeCCeeEEEEeeCccc
Q 012225 180 RTALDSGKDLDMPDGVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYT 259 (468)
Q Consensus 180 ~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~Via~DG~~~ 259 (468)
..... ....+.++.++|||+..+.|.. .+..+.++|++|++|||||||+|..+.+.|+|+||+|+|||+||.++
T Consensus 184 ~~~~~-~~~~~~~d~~liNG~~~~~~~~-----~g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~ 257 (559)
T 2q9o_A 184 VHFTQ-NNAPPFSDNVLINGTAVNPNTG-----EGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPV 257 (559)
T ss_dssp HHHHT-TSCCCCBSEEEETTBCBCTTTC-----CBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEE
T ss_pred hhhhh-cCCCCccceeEECCccccCcCC-----CCCceEEEEcCCCEEEEEEEecCCCceEEEEECCCceEEEecCCccc
Confidence 43222 2234568999999999866532 23457899999999999999999999999999999999999999999
Q ss_pred cceeeceEEEcCCceEEEEEEecCCCCcceEEEEEe--cccccccccccceEEEEEEcCCCCCCCCCCCCCCCCCcccc-
Q 012225 260 SQQNYTSFEIHVGQSYSFLVTMDQNASSDYYIVASA--RFVNESFWQRVTGVAILHYSNSKGAASGPLPEAPSDIYNQW- 336 (468)
Q Consensus 260 ~p~~~d~i~l~pGqR~dv~v~~~~~~g~~y~i~~~~--~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~~p~~~~~~- 336 (468)
+|+.++++.|+|||||||+|++++++| +|||++.. ...+. ...+....++|+|.++... .|. .+.....+
T Consensus 258 ~p~~~~~l~l~pgeR~dvlv~~~~~~g-~y~i~a~~~~~~~~~-~~~~~~~~ail~y~~~~~~----~P~-~~~~~~~~~ 330 (559)
T 2q9o_A 258 NAMTVDSLFLAVGQRYDVVIDASRAPD-NYWFNVTFGGQAACG-GSLNPHPAAIFHYAGAPGG----LPT-DEGTPPVDH 330 (559)
T ss_dssp EEEEESCEEECTTCEEEEEEECCSCSS-EEEEEEECCGGGTTC-CBSSSCCEEEEEETTSCCS----CCC-CCCCCCCCC
T ss_pred CceEeCeEEEccEEEEEEEEECCCCCC-cEEEEEEeccccccC-CCCCCceeEEEEECCCCCC----CCC-CCCCcCCCc
Confidence 999999999999999999999998777 99999986 32211 1123456899999875421 111 00000000
Q ss_pred cccCCccccccCCCCCCCCCCCCCCCCCCccccceEEEEecCCCcccCCeEEEEEcCeeccC-CCCchhhhcccCCCccc
Q 012225 337 AAMTQPRSIRQNTSASGARPNPQGSFHYGSINITDTYVLRSLPPVTIDGKVRSTLNGISFVK-PETPIRLADKYNVKGAY 415 (468)
Q Consensus 337 ~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~i~l~~~~~~~~~g~~~~~iN~~s~~~-p~~P~l~~~~~~~~~~~ 415 (468)
..++. ..+.+....+.|...+ ....+.++.+.... ...+...|+|||++|.. +..|+|.+...+..
T Consensus 331 ~~~~~-----~~l~p~~~~~~p~~~~---~~~~~~~~~~~~~~--~~~~~~~~~iNg~s~~~~~~~P~L~~~~~g~~--- 397 (559)
T 2q9o_A 331 QCLDT-----LDVRPVVPRSVPVNSF---VKRPDNTLPVALDL--TGTPLFVWKVNGSDINVDWGKPIIDYILTGNT--- 397 (559)
T ss_dssp TTCCC-----SCCCBSSCCBCCCTTC---CCCGGGEEEEEEEC--SSSSSCEEEETTBCCCCCTTSCHHHHHHHTCC---
T ss_pred ccccc-----cccccCCCCCCCCccc---ccceeEEEEEEeec--CCCceEEEEECCEecccCCCCCcHhHhhcCCc---
Confidence 01110 1121111111222111 01223445544321 12356789999999964 46788765542110
Q ss_pred ccCCCCCCCCCCCCcceEEEEecC-CcEEEEEEecCC----CCCCceeccCCCceeeC
Q 012225 416 KLDFPNKPLTRPPRTDRSLINATY-KGFIEIILQNND----TKMQSFHMDGYSFFVVG 468 (468)
Q Consensus 416 ~~~~~~~p~~~~~~~~~~~~~~~~-g~~Veivi~N~~----~~~HP~HLHGh~F~Vlg 468 (468)
++ | .+.+++.++. ++|++|+|+|.+ .+.||||||||+||||+
T Consensus 398 --~~---~------~~~~~~~~~~~~~v~~~vi~n~~~~~~~~~HP~HLHGh~F~Vl~ 444 (559)
T 2q9o_A 398 --SY---P------VSDNIVQVDAVDQWTYWLIENDPEGPFSLPHPMHLHGHDFLVLG 444 (559)
T ss_dssp --CC---C------GGGCEEEECCSSCEEEEEEEECTTSSCCCCEEEEESSSCEEEEE
T ss_pred --cC---C------CCceEEEcCCCCEEEEEEEeCCCccccCCCCcEEECCCceEEEe
Confidence 11 1 1456677765 678888999976 78999999999999985
No 9
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=100.00 E-value=7.2e-70 Score=563.60 Aligned_cols=348 Identities=16% Similarity=0.184 Sum_probs=268.2
Q ss_pred ccEEEEEEEEEEEECC-CCceEEEEEEcCcCCCceEEEecCCEEEEEEEeCCCCCceeecCcccCCCCCCCCCCCCCCCC
Q 012225 29 DTIFYDFKVSYITASP-LGVPQQVIAINGKFPGAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQGTNCP 107 (468)
Q Consensus 29 ~~~~~~l~~~~~~~~~-dG~~~~~~~~Ng~~PgP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~ 107 (468)
.+++|+|++++..+++ ||+.+.+|+|||++|||+||+++||+|+|+|+|+++++++|||||+++..+ +||+| ||+
T Consensus 17 ~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~~--~DG~~--~~~ 92 (451)
T 2uxt_A 17 RGQPLFMTVQRAHWSFTPGTRASVWGINGRYLGPTIRVWKGDDVKLIYSNRLTENVSMTVAGLQVPGP--LMGGP--ARM 92 (451)
T ss_dssp SSCCEEEEEEECCGGGCSSSSSCCEEETTSSBCCEEEEETTCEEEEEEEECSSSCBCEEEETCCCCGG--GSCSG--GGC
T ss_pred CceEEEEEEEEEEEEcCCCceeEEEEECCcccCceEEEeCCCEEEEEEEECCCCCccEEECCccCCCC--CCCCC--cCc
Confidence 3689999999999988 799999999999999999999999999999999999999999999998754 99998 999
Q ss_pred cCCCCceEEEEEeCCCceeeEEeeCc----cccccCCeeecEEEecCCCCCCCCC--CCCCcEEEEEeeeeecchHHHHH
Q 012225 108 IPSQWNWTYQFQVKDQIGSFFYFPSL----NLQRVSGGFGPVIINNRKVIPIPFD--QPEGDIIFLIGDWYTRNHTALRT 181 (468)
Q Consensus 108 I~PG~~~~y~f~~~~~~Gt~wyH~H~----~~q~~~Gl~G~liV~~~~~~~~~~~--~~~~e~~l~l~d~~~~~~~~~~~ 181 (468)
|+||++|+|+|++.+++||||||||. +.|+.+||+|+|||++++....+++ ..++|++|+|+||+++.+.++..
T Consensus 93 i~PG~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~~p~~y~~~e~~l~l~D~~~~~~~~~~~ 172 (451)
T 2uxt_A 93 MSPNADWAPVLPIRQNAATLWYHANTPNRTAQQVYNGLAGMWLVEDEVSKSLPIPNHYGVDDFPVIIQDKRLDNFGTPEY 172 (451)
T ss_dssp BCTTCEECCEEECCSCSEEEEEEECCTTTHHHHHHTTCEEEEEEECHHHHHSSSCCCBTTTEEEEEEEEEEECTTSCEEC
T ss_pred CCCCCeEEEEEEcCCCCcceEEecCCCCchhhhHhhcceEEEEEecCcccccCCCccCCCceEEEEEEeeecCCCCceec
Confidence 99999999999996559999999997 7899999999999998754322222 24889999999999986544321
Q ss_pred HhhcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceEEEEcCCCEEEEEEEEcCCCCeeeEEE-eCCeeEEEEeeCccc-
Q 012225 182 ALDSGKDLDMPDGVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRI-QNHNLLLVETEGHYT- 259 (468)
Q Consensus 182 ~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i-~gh~~~Via~DG~~~- 259 (468)
...+.....++.++|||+.. +.++|++| +|||||||+|..+.+.|+| +||+|+||++||.++
T Consensus 173 -~~~~~~~~~~d~~liNG~~~--------------p~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~vi~~DG~~~~ 236 (451)
T 2uxt_A 173 -NEPGSGGFVGDTLLVNGVQS--------------PYVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHVISGDQGFLP 236 (451)
T ss_dssp -CCCSSSCCCCSEEEETTEES--------------CEEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEEEECSSSEEE
T ss_pred -ccccCCCCcCCEEEECCccc--------------ceEEecCC-EEEEEEEccCCceeEEEEECCCCeEEEEEeCCCccC
Confidence 11122335679999999997 88999999 9999999999999999999 899999999999987
Q ss_pred cceeeceEEEcCCceEEEEEEecCCCCcceEEEEEecccccc-------cccccceEEEEEEcCCCCCCCCCCCCCCCCC
Q 012225 260 SQQNYTSFEIHVGQSYSFLVTMDQNASSDYYIVASARFVNES-------FWQRVTGVAILHYSNSKGAASGPLPEAPSDI 332 (468)
Q Consensus 260 ~p~~~d~i~l~pGqR~dv~v~~~~~~g~~y~i~~~~~~~~~~-------~~~~~~~~ail~y~~~~~~~~~~~p~~~p~~ 332 (468)
+|..++++.|+|||||||+|++++ ++ +|||++........ ........++++|........ +... .|.
T Consensus 237 ~P~~~~~l~l~pgeR~dvlv~~~~-~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~-~~~~-~p~- 311 (451)
T 2uxt_A 237 APVSVKQLSLAPGERREILVDMSN-GD-EVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPL-VTDS-LPM- 311 (451)
T ss_dssp EEEEESSEEECTTCEEEEEEECTT-CC-CEEEEC----------------CCCCSCCEEEEEEECSCCC-----C-CCS-
T ss_pred CceEeceEEECceeEEEEEEEeCC-CC-EEEEEecCccccccccccccccCCCCCCcceEEEEecCCCcC-cccc-Ccc-
Confidence 699999999999999999999995 56 89998765432110 001134467888875432110 0000 110
Q ss_pred cccccccCCccccccCCCCCCCCCCCCCCCCCCccccceEEEEecCCCcccCCeEEEEEcCeeccCCCCchhhhcccCCC
Q 012225 333 YNQWAAMTQPRSIRQNTSASGARPNPQGSFHYGSINITDTYVLRSLPPVTIDGKVRSTLNGISFVKPETPIRLADKYNVK 412 (468)
Q Consensus 333 ~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~i~l~~~~~~~~~g~~~~~iN~~s~~~p~~P~l~~~~~~~~ 412 (468)
.|.+....+. ....++++.|. + .|+|||++|..+. |
T Consensus 312 ---------------~L~~~~~~~~--------~~~~~~~~~l~--------~--~~~iNg~~f~~~~-~---------- 347 (451)
T 2uxt_A 312 ---------------RLLPTEIMAG--------SPIRSRDISLG--------D--DPGINGQLWDVNR-I---------- 347 (451)
T ss_dssp ---------------CSSSSCCCCC--------CCSEEEEEEEC--------S--SSSBTTBCCCTTC-C----------
T ss_pred ---------------ccCCCCCCCC--------CCcceEEEEEe--------e--EEEECCEeCCCCC-C----------
Confidence 0111110011 12345555553 1 5999999995321 1
Q ss_pred cccccCCCCCCCCCCCCcceEEEEecCCcEEEEEEecCCCCCCceeccCCCceeeC
Q 012225 413 GAYKLDFPNKPLTRPPRTDRSLINATYKGFIEIILQNNDTKMQSFHMDGYSFFVVG 468 (468)
Q Consensus 413 ~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~Veivi~N~~~~~HP~HLHGh~F~Vlg 468 (468)
.+.++.|++|+|+|+|. +.||||||||+||||+
T Consensus 348 ---------------------~~~~~~G~~~~~~l~N~--~~HP~HLHGh~F~Vl~ 380 (451)
T 2uxt_A 348 ---------------------DVTAQQGTWERWTVRAD--EPQAFHIEGVMFQIRN 380 (451)
T ss_dssp ---------------------CEEEETTCEEEEEEEEE--EEEEEEETTCEEEEEE
T ss_pred ---------------------cEEcCCCCEEEEEEECC--CCcCeEECCceEEEEe
Confidence 13568899999999998 7999999999999984
No 10
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=100.00 E-value=2.8e-68 Score=550.83 Aligned_cols=347 Identities=20% Similarity=0.312 Sum_probs=273.1
Q ss_pred cCccEEEEEEEEEEEECCCCceEEEEEEcCcCCCceEEEecCCEEEEEEEeCCCCCceeecCcccCCCCCCCCCCCCCCC
Q 012225 27 EDDTIFYDFKVSYITASPLGVPQQVIAINGKFPGAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQGTNC 106 (468)
Q Consensus 27 ~~~~~~~~l~~~~~~~~~dG~~~~~~~~Ng~~PgP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~ 106 (468)
.+++++|+|++++..+++||+.+.+|+|||++|||+||+++||+|+|+|+|+++++++|||||+++. +++||++ +
T Consensus 13 ~~~~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~--~~~DG~~---~ 87 (439)
T 2xu9_A 13 QGGLLSLKLSATPTPLAIAGQRATLLTYGGSFPGPTLRVRPRDTVRLTLENRLPEPTNLHWHGLPIS--PKVDDPF---L 87 (439)
T ss_dssp BTTEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEECTTCEEEEEEEECSSSCBCCEEETCCCC--TTTSCTT---C
T ss_pred CCCeEEEEEEEEEEEEEcCCceEEEEEECCcccCCEEEEeCCCEEEEEEEECCCCCcceEeCCCCCC--ccccCCc---c
Confidence 4567999999999999999999999999999999999999999999999999999999999999875 5899987 5
Q ss_pred CcCCCCceEEEEEeC-CCceeeEEeeCc----cccccCCeeecEEEecCCCCCCCCCCCCCcEEEEEeeeeecchHH---
Q 012225 107 PIPSQWNWTYQFQVK-DQIGSFFYFPSL----NLQRVSGGFGPVIINNRKVIPIPFDQPEGDIIFLIGDWYTRNHTA--- 178 (468)
Q Consensus 107 ~I~PG~~~~y~f~~~-~~~Gt~wyH~H~----~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~--- 178 (468)
.|+||++|+|+|+++ +++||||||||. +.|+.+||+|+|||+++... .+...+++|++|+|+||+++....
T Consensus 88 ~I~PG~~~~Y~f~~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~-~~~~~~~~e~~l~l~D~~~~~~~~~~~ 166 (439)
T 2xu9_A 88 EIPPGESWTYEFTVPKELAGTFWYHPHLHGRVAPQLFAGLLGALVVESSLDA-IPELREAEEHLLVLKDLALQGGRPAPH 166 (439)
T ss_dssp CBCTTCEEEEEEECCSSCCEEEEEECCCTTSHHHHHHTTCCEEEEECCGGGG-SHHHHTSEEEEEEEEEECEETTEECCC
T ss_pred cCCCCCeEEEEEecCCCCCcceEeccCCCCchHHHHHhhCeEEEEEcCcccc-CccCCCCCcEEEEEEeeeeCCCCcCCC
Confidence 699999999999986 479999999996 57999999999999986532 111135889999999999975310
Q ss_pred -HHHHhhcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceEEEEcCCCEEEEEEEEcCCCCeeeEEEeCCeeEEEEeeCc
Q 012225 179 -LRTALDSGKDLDMPDGVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGH 257 (468)
Q Consensus 179 -~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~Via~DG~ 257 (468)
....+ .+ ..++.++|||+.. +.++|++| +|||||||+|..+.+.|+|+||+|+||++||.
T Consensus 167 ~~~~~~-~g---~~~~~~~iNG~~~--------------p~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG~ 227 (439)
T 2xu9_A 167 TPMDWM-NG---KEGDLVLVNGALR--------------PTLVAQKA-TLRLRLLNASNARYYRLALQDHPLYLIAADGG 227 (439)
T ss_dssp CHHHHH-HC---CCCSEEEETTEES--------------CEEECSSS-EEEEEEEECCSSCCEEEEETTBCEEEEEETTE
T ss_pred Cccccc-cC---CCCCEEEECCccC--------------CcEEecCC-eEEEEEEecCCCceEEEEECCceEEEEecCCC
Confidence 00111 11 3468999999986 88999999 99999999999999999999999999999999
Q ss_pred cc-cceeeceEEEcCCceEEEEEEecCCCCcceEEEEEeccccccc--------------ccccceEEEEEEcCCCCCCC
Q 012225 258 YT-SQQNYTSFEIHVGQSYSFLVTMDQNASSDYYIVASARFVNESF--------------WQRVTGVAILHYSNSKGAAS 322 (468)
Q Consensus 258 ~~-~p~~~d~i~l~pGqR~dv~v~~~~~~g~~y~i~~~~~~~~~~~--------------~~~~~~~ail~y~~~~~~~~ 322 (468)
++ +|..++++.|+|||||||+|++++ +| +|||++.....+... .......++|+|.++...
T Consensus 228 ~~~~p~~~~~l~l~pgeR~dv~v~~~~-~G-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-- 303 (439)
T 2xu9_A 228 FLEEPLEVSELLLAPGERAEVLVRLRK-EG-RFLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNPKP-- 303 (439)
T ss_dssp EEEEEEEESCEEECTTCEEEEEEECCS-SE-EEEEEEECCCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSSCCC--
T ss_pred CCCCceEeceEEECCceeEEEEEEcCC-Cc-eEEEEecccccCCccccccccccccccCCCCCcceeEEEEecCCCcc--
Confidence 97 799999999999999999999997 67 899998754321110 012356788999865311
Q ss_pred CCCCCCCCCCcccccccCCccccccCCCCCCCCCCCCCCCCCCccccceEEEEecCCCcccCCeEEEEEcCeeccCCCCc
Q 012225 323 GPLPEAPSDIYNQWAAMTQPRSIRQNTSASGARPNPQGSFHYGSINITDTYVLRSLPPVTIDGKVRSTLNGISFVKPETP 402 (468)
Q Consensus 323 ~~~p~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~i~l~~~~~~~~~g~~~~~iN~~s~~~p~~P 402 (468)
.++|. .+.+... .+. +..++++.+.... .+ ..|+|||++|..+..+
T Consensus 304 ~~~p~----------~l~~~~~----------l~~---------~~~~r~~~l~~~~----~g-~~~~iNg~~~~~~~~~ 349 (439)
T 2xu9_A 304 LPLPK----------ALSPFPT----------LPA---------PVVTRRLVLTEDM----MA-ARFFINGQVFDHRRVD 349 (439)
T ss_dssp CCCCS----------CCCCCCC----------CCC---------CSEEEEEEEEEEG----GG-TEEEETTBCCCTTCCC
T ss_pred ccCcc----------cCCCccc----------CCC---------CCcceEEEEEeec----cC-ceEeECCEECCCCCCc
Confidence 11211 0000000 011 1234677776532 11 3799999999532111
Q ss_pred hhhhcccCCCcccccCCCCCCCCCCCCcceEEEEecCCcEEEEEEecCCCCCCceeccCCCceeeC
Q 012225 403 IRLADKYNVKGAYKLDFPNKPLTRPPRTDRSLINATYKGFIEIILQNNDTKMQSFHMDGYSFFVVG 468 (468)
Q Consensus 403 ~l~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~Veivi~N~~~~~HP~HLHGh~F~Vlg 468 (468)
+.++.|++++|+|+|.+.+.||||||||+||||+
T Consensus 350 --------------------------------~~~~~g~~~~~~~~N~~~~~HP~HLHG~~F~Vl~ 383 (439)
T 2xu9_A 350 --------------------------------LKGQAQTVEVWEVENQGDMDHPFHLHVHPFQVLS 383 (439)
T ss_dssp --------------------------------EEECTTCEEEEEEEECSSSCEEEEESSCCBEEEE
T ss_pred --------------------------------eecCCCCEEEEEEEcCCCCCCCceeCCCcEEEEe
Confidence 3468899999999999999999999999999985
No 11
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=100.00 E-value=2.4e-66 Score=545.78 Aligned_cols=361 Identities=18% Similarity=0.224 Sum_probs=268.0
Q ss_pred cEEEEEEEEEEEECC--CCceEEEEEEcCcCCCceEEEecCCEEEEEEEeCCCC----------------------Ccee
Q 012225 30 TIFYDFKVSYITASP--LGVPQQVIAINGKFPGAVLNATTNNNIVINVQNDLDE----------------------SLLM 85 (468)
Q Consensus 30 ~~~~~l~~~~~~~~~--dG~~~~~~~~Ng~~PgP~i~~~~Gd~v~v~v~N~l~~----------------------~~si 85 (468)
..+|+|++++..... ++..+.+|+|||++|||+||+++||+|+|+|+|+|++ +|+|
T Consensus 25 ~~~~~l~~~~~~~~~~~~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~L~~~~~~~~~~t~~~~~~~~~~~~~~tsi 104 (513)
T 2wsd_A 25 KTYYEVTMEECTHQLHRDLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTVV 104 (513)
T ss_dssp CEEEEEEEEEEEECSSTTSCCEEEEEETTBSSCCBEEEETTCCEEEEEEECCCSSCSSCCCTTSCC-----CCCSCCBCE
T ss_pred ceEEEEEEEEeeeeeCCCCCCceEEEECCCccCceEEECCCCEEEEEEEeCCCccccCccccccccccccccCCCCCcEE
Confidence 456999999988654 5578999999999999999999999999999999975 8999
Q ss_pred ecCcccCCCCCCCCCCCC---CCCCcCCCCce---EEEEEeCCCceeeEEeeCcc----ccccCCeeecEEEecCCCCCC
Q 012225 86 TWPGIQMRRNSWQDGVQG---TNCPIPSQWNW---TYQFQVKDQIGSFFYFPSLN----LQRVSGGFGPVIINNRKVIPI 155 (468)
Q Consensus 86 H~HG~~~~~~~~~DGv~~---tq~~I~PG~~~---~y~f~~~~~~Gt~wyH~H~~----~q~~~Gl~G~liV~~~~~~~~ 155 (468)
||||+++. +++||++. +||+|+||++| +|+|++.+++||||||||.. .|+.+||+|+|||+++...+.
T Consensus 105 HwHGl~~~--~~~DG~p~~~i~~g~i~pG~~f~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~ 182 (513)
T 2wsd_A 105 HLHGGVTP--DDSDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDPKEKRL 182 (513)
T ss_dssp EEETCCCC--GGGSCCTTSCBCGGGSSBCTTCCCSEEEECCCSCCEEEEEEECCTTTHHHHHHHTCEEEEEEECGGGGGG
T ss_pred EcCCCcCC--CccCCCCcccccCCcccCCCccceEEEEEecCCCccceEECCCCCCcchhhhhccCeEEEEEeccccccc
Confidence 99999876 67999983 89999999555 99999866799999999974 489999999999999765444
Q ss_pred CCCCCCCcEEEEEeeeeecchHHHHHHhhc-----------CCCCCCCceEEEcCcCCCCCCCccCCCCCcceEEEEcCC
Q 012225 156 PFDQPEGDIIFLIGDWYTRNHTALRTALDS-----------GKDLDMPDGVLINGKGPYRYNTTLVPDGIEYETINVDPG 224 (468)
Q Consensus 156 ~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~-----------g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G 224 (468)
+++.+++|++|+|+||+++.+.++...... ......++.++|||+.+ +.++++++
T Consensus 183 ~lp~~d~d~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~--------------p~~~v~~~ 248 (513)
T 2wsd_A 183 KLPSDEYDVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGETILVNGKVW--------------PYLEVEPR 248 (513)
T ss_dssp CCCCGGGEEEEEEEEEEECTTSCEECCSSCSSCCTTSCSSCCCSCCCCSEEEETTEES--------------CEEECCSS
T ss_pred cCCCCCCcEEEEEEeeecCCCCceecccccccccccccccccccccccceEEECCccc--------------ceEEecCC
Confidence 444568999999999999865443111100 01224579999999997 78999985
Q ss_pred CEEEEEEEEcCCCCeeeEEEeCC-eeEEEEeeCccc-cceeeceEEEcCCceEEEEEEecCCCCcceEEEEEeccccccc
Q 012225 225 KTYRVRVHNVGTSTSLNFRIQNH-NLLLVETEGHYT-SQQNYTSFEIHVGQSYSFLVTMDQNASSDYYIVASARFVNESF 302 (468)
Q Consensus 225 ~~~rlRliN~~~~~~~~~~i~gh-~~~Via~DG~~~-~p~~~d~i~l~pGqR~dv~v~~~~~~g~~y~i~~~~~~~~~~~ 302 (468)
+|||||||+|..+.+.|+|+|| +|+|||+||.++ +|+.++++.|+|||||||+|++++.+|..+++.........
T Consensus 249 -~~RlRliNa~~~~~~~~~i~~~~~~~via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~~~~~~-- 325 (513)
T 2wsd_A 249 -KYRFRVINASNTRTYNLSLDNGGDFIQIGSDGGLLPRSVKLNSFSLAPAERYDIIIDFTAYEGESIILANSAGCGGD-- 325 (513)
T ss_dssp -EEEEEEEECCSSCCEEEEETTCCCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECGGGTTCEEEEEECCCSSSS--
T ss_pred -EEEEEEEccCCcceEEEEECCCCeEEEEccCCCcccCceEeCeEEECCeeeEEEEEECCCCCCcEEEEEeccccccc--
Confidence 8999999999999999999999 999999999998 69999999999999999999999877722333322111000
Q ss_pred ccccceEEEEEEcCCCCCCCCCCCCCCCCCcccccccCCccccccCCCCCCCCCCCCCCCCCCccccceEEEEecCCCcc
Q 012225 303 WQRVTGVAILHYSNSKGAASGPLPEAPSDIYNQWAAMTQPRSIRQNTSASGARPNPQGSFHYGSINITDTYVLRSLPPVT 382 (468)
Q Consensus 303 ~~~~~~~ail~y~~~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~i~l~~~~~~~ 382 (468)
.......++|+|..+..... +.+...|. .+... ...+. .....++++.+.... .
T Consensus 326 ~~~~~~~~il~~~~~~~~~~-~~~~~~p~------~l~~~----------~~~~~-------~~~~~~~~~~l~~~~--~ 379 (513)
T 2wsd_A 326 VNPETDANIMQFRVTKPLAQ-KDESRKPK------YLASY----------PSVQH-------ERIQNIRTLKLAGTQ--D 379 (513)
T ss_dssp CCTTTTTEEEEEECCSCCSS-CCCCCCCS------BCSCC----------GGGCC-------CCEEEEEEEEEEEEE--C
T ss_pred CCCCCCcceEEEEeccCccc-CccCCCCc------cccCC----------CCccc-------CCCcceEEEEEEeec--C
Confidence 11124457899975431110 00000111 01000 00000 012356666665421 1
Q ss_pred cCCeEEEEEcCeeccCCCCchhhhcccCCCcccccCCCCCCCCCCCCcceEEEEecCCcEEEEEEecCCCCCCceeccCC
Q 012225 383 IDGKVRSTLNGISFVKPETPIRLADKYNVKGAYKLDFPNKPLTRPPRTDRSLINATYKGFIEIILQNNDTKMQSFHMDGY 462 (468)
Q Consensus 383 ~~g~~~~~iN~~s~~~p~~P~l~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~Veivi~N~~~~~HP~HLHGh 462 (468)
..+...|+|||++|..+ .. +.++.|++|+|+|+|.+.+.||||||||
T Consensus 380 ~~g~~~~~iNg~~~~~~---~~------------------------------~~~~~g~~~~w~l~N~~~~~HP~HlHG~ 426 (513)
T 2wsd_A 380 EYGRPVLLLNNKRWHDP---VT------------------------------ETPKVGTTEIWSIINPTRGTHPIHLHLV 426 (513)
T ss_dssp TTSCEEEEETTBCTTSC---CC------------------------------BCCBTTCEEEEEEEECSSSCEEEEESSC
T ss_pred CCCCceEeECCccCCCc---cc------------------------------EecCCCCEEEEEEEcCCCCCcCEeEeCc
Confidence 23566899999998532 10 1246799999999999889999999999
Q ss_pred CceeeC
Q 012225 463 SFFVVG 468 (468)
Q Consensus 463 ~F~Vlg 468 (468)
+||||+
T Consensus 427 ~F~Vl~ 432 (513)
T 2wsd_A 427 SFRVLD 432 (513)
T ss_dssp CEEEEE
T ss_pred eEEEEE
Confidence 999984
No 12
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=100.00 E-value=6.1e-67 Score=550.85 Aligned_cols=356 Identities=14% Similarity=0.188 Sum_probs=268.7
Q ss_pred cEEEEEEEEEEE--ECCCCceEEEEEEcCcCCCceEEEecCCEEEEEEEeCCCCCceeecCcccCCCCCCCCCCCCCCCC
Q 012225 30 TIFYDFKVSYIT--ASPLGVPQQVIAINGKFPGAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQGTNCP 107 (468)
Q Consensus 30 ~~~~~l~~~~~~--~~~dG~~~~~~~~Ng~~PgP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~ 107 (468)
+++|+|++++.. +.+||..+.+|+|||++|||+||+++||+|+|+|+|+++++++|||||+++. +++||++ ||+
T Consensus 36 ~~~~~l~~~~~~~~~~p~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~--~~~DG~~--~~~ 111 (534)
T 3abg_A 36 IWYYEVEIKPFTHQVYPDLGSADLVGYDGMSPGPTFQVPRGVETVVRFINNAEAPNSVHLHGSFSR--AAFDGWA--EDI 111 (534)
T ss_dssp CEEEEEEEECCEECCSTTTCCEECBEETSCSSEEEEEEETTCCEEEEEEECSSSCBCEEEETCCCC--TTTTTCS--SSC
T ss_pred eEEEEEEEEEEEEEecCCCCceeEEEECCcCcCceEEEeCCcEEEEEEEECCCCCceEEECCCcCC--CCCCCCC--CCC
Confidence 478999999654 6789999999999999999999999999999999999999999999999886 4699976 899
Q ss_pred cCCCCceEEEEEeCCCceeeEEeeCcc----ccccCCeeecEEEecCCCCCCCCCC--CCCcEEEEEeeeeecchHHHHH
Q 012225 108 IPSQWNWTYQFQVKDQIGSFFYFPSLN----LQRVSGGFGPVIINNRKVIPIPFDQ--PEGDIIFLIGDWYTRNHTALRT 181 (468)
Q Consensus 108 I~PG~~~~y~f~~~~~~Gt~wyH~H~~----~q~~~Gl~G~liV~~~~~~~~~~~~--~~~e~~l~l~d~~~~~~~~~~~ 181 (468)
|+||++|+|+|++.+++||||||||.. .|+.+||+|+|||++++....+++. .+.|++|+|+||+++.+.++..
T Consensus 112 i~PG~~~~Y~f~~~~~~GT~WYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~lp~~~~~~d~~l~l~d~~~~~~g~~~~ 191 (534)
T 3abg_A 112 TEPGSFKDYYYPNRQSARTLWYHDHAMHITAENAYRGQAGLYMLTDPAEDALNLPSGYGEFDIPMILTSKQYTANGNLVT 191 (534)
T ss_dssp BSSCSCCCEEECCCSSSCEEEEEECCTTCHHHHHHTBCEEEEEEECTTTTTSCTTCCHHHHSCCEEEEEECBCSSSCBCC
T ss_pred CCCCCeEEEEEecCCcceeEEEecCccccchhhhhhcceEEEEEECCcccccCCCccCCcceEEEEEeeeeecCCCceec
Confidence 999999999999965589999999974 5788999999999997754433332 2678999999999876544321
Q ss_pred HhhcCC-CCCCCceEEEcCcCCCCCCCccCCCCCcceEEEEcCCCEEEEEEEEcCCCCeeeEEEeC-------CeeEEEE
Q 012225 182 ALDSGK-DLDMPDGVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQN-------HNLLLVE 253 (468)
Q Consensus 182 ~~~~g~-~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~g-------h~~~Via 253 (468)
..+. ....+|.++|||+.. +.++|++ ++|||||||+|..+.+.|+|++ |+|+|||
T Consensus 192 --~~~~~~~~~gd~~lvNG~~~--------------p~~~v~~-~~~RlRliNa~~~~~~~l~i~~~~~~~~~h~~~vIa 254 (534)
T 3abg_A 192 --TNGELNSFWGDVIHVNGQPW--------------PFKNVEP-RKYRFRFLDAAVSRSFGLYFADTDAIDTRLPFKVIA 254 (534)
T ss_dssp --CTTCSSCCCCSEEEETTEES--------------CBCBCCS-SEEEEEEEECCSSCCEEEEECCSSSTTCCCCEEEEE
T ss_pred --cCCCCccccCceeccCCccC--------------ceEEecC-cEEEEEEEecCCcceEEEEEecccCcCCCccEEEEE
Confidence 1111 223578999999987 7789998 5899999999999999999987 9999999
Q ss_pred eeCcc-ccceeeceEEEcCCceEEEEEEecCCCCcceEEEEEeccc-ccc-cccccceEEEEEEcCCCCCCCCCCCCCCC
Q 012225 254 TEGHY-TSQQNYTSFEIHVGQSYSFLVTMDQNASSDYYIVASARFV-NES-FWQRVTGVAILHYSNSKGAASGPLPEAPS 330 (468)
Q Consensus 254 ~DG~~-~~p~~~d~i~l~pGqR~dv~v~~~~~~g~~y~i~~~~~~~-~~~-~~~~~~~~ail~y~~~~~~~~~~~p~~~p 330 (468)
+||.+ .+|..++.+.|+|||||||+|++++.+|++|||++..... +.. ........++++|..+..... +.+...|
T Consensus 255 ~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~-~~~~~~P 333 (534)
T 3abg_A 255 SDSGLLEHPADTSLLYISMAERYEVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQ-PDTSVVP 333 (534)
T ss_dssp ETTEEEEEEEEESCEEECTTCEEEEEEECSSCTTSEEEEECCCCSSSSCCSCSSSTTTSEEEEEECCCCSSC-SCCCCCC
T ss_pred eCCCcccCceEeceEEECCccEEEEEEEcCCCCCceEEEEeccccccccccccCcCCcceeEEEecCCCCcC-CCCCCCc
Confidence 99985 5799999999999999999999998667579998743111 100 001123458899875432100 0000011
Q ss_pred CCcccccccCCccccccCCCCCCCCCCCCCCCCCCccccceEEEEecCCCcccCCeEEEEEcCeeccCCCCchhhhcccC
Q 012225 331 DIYNQWAAMTQPRSIRQNTSASGARPNPQGSFHYGSINITDTYVLRSLPPVTIDGKVRSTLNGISFVKPETPIRLADKYN 410 (468)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~i~l~~~~~~~~~g~~~~~iN~~s~~~p~~P~l~~~~~~ 410 (468)
..+..... +.+. ...++++.+... . ..|+|||++|..+..|++
T Consensus 334 ----------------~~L~~~~~-p~~~-------~~~~~~~~~~~~-----~--~~w~iNG~~f~~~~~p~l------ 376 (534)
T 3abg_A 334 ----------------ANLRDVPF-PSPT-------TNTPRQFRFGRT-----G--PTWTINGVAFADVQNRLL------ 376 (534)
T ss_dssp ----------------CCCCCCSC-CCCC-------CCCCEEEECSCC-----C--STTCCCCBTTBCTTSCCC------
T ss_pred ----------------cccccCCC-CCCc-------cccceEEEEecc-----C--ceeEECCcccCCCCCcce------
Confidence 01111000 1111 234666665431 1 259999999965544432
Q ss_pred CCcccccCCCCCCCCCCCCcceEEEEecCCcEEEEEEecCCC-CCCceeccCCCceeeC
Q 012225 411 VKGAYKLDFPNKPLTRPPRTDRSLINATYKGFIEIILQNNDT-KMQSFHMDGYSFFVVG 468 (468)
Q Consensus 411 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~Veivi~N~~~-~~HP~HLHGh~F~Vlg 468 (468)
+.++.|++++|+|+|.+. +.||||||||+||||+
T Consensus 377 ------------------------~~v~~G~~~~w~i~N~~~~~~HP~HLHG~~F~Vl~ 411 (534)
T 3abg_A 377 ------------------------ANVPVGTVERWELINAGNGWTHPIHIHLVDFKVIS 411 (534)
T ss_dssp ------------------------CEECTTCEEEEEEEECSSSCCCCEEESSCCEEEEE
T ss_pred ------------------------eeccCCCEEEEEEEcCCCCCCcCEEECCeeEEEEE
Confidence 135789999999999874 5999999999999984
No 13
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=100.00 E-value=8.9e-67 Score=539.68 Aligned_cols=322 Identities=16% Similarity=0.256 Sum_probs=251.5
Q ss_pred EEEcCc-CCCceEEEecCCEEEEEEEeCCCCCceeecCcccCCCCCCCCCCCCCCCCcCCCCceEEEEEeCCCceeeEEe
Q 012225 52 IAINGK-FPGAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQGTNCPIPSQWNWTYQFQVKDQIGSFFYF 130 (468)
Q Consensus 52 ~~~Ng~-~PgP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~y~f~~~~~~Gt~wyH 130 (468)
|+|||+ +|||+||+++||+|+|+|+|+++++++|||||+++. +++||+++ |+|+||++|+|+|++++++||||||
T Consensus 28 ~~~Ng~~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~--~~~DG~~~--~~i~PG~~~~Y~f~~~~~~GT~wYH 103 (448)
T 3aw5_A 28 SGYMAEGVLNPTIILRRGQRVDMTLKNKLTEPTIVHWHGFDVN--WHNDAHPS--FAITPGESYNYSFDVVNRAGTYLYH 103 (448)
T ss_dssp TEEEETTEESCEEEEETTCEEEEEEEECSSSCBCEEEETCCCC--HHHHTCGG--GCBCTTCEEEEEEECCSCSEEEEEE
T ss_pred EEECCccccCceEEEeCCCEEEEEEEECCCCceeEEeCCccCC--CccCCCCC--ccCCCCCEEEEEEEcCCCCCceEec
Confidence 999999 999999999999999999999999999999999885 67999986 9999999999999997579999999
Q ss_pred eC----ccccccCCeeecEEEecCCCCCCCCCCCC-CcEEEEEeeeeecchHHHHHH--hhcCCCCCCCceEEEcCcCCC
Q 012225 131 PS----LNLQRVSGGFGPVIINNRKVIPIPFDQPE-GDIIFLIGDWYTRNHTALRTA--LDSGKDLDMPDGVLINGKGPY 203 (468)
Q Consensus 131 ~H----~~~q~~~Gl~G~liV~~~~~~~~~~~~~~-~e~~l~l~d~~~~~~~~~~~~--~~~g~~~~~~~~~liNG~~~~ 203 (468)
|| ++.|+.+||+|+|||++++.. .+++ +| +|++|+|+||+++. .++... ...+.....++.++|||+..
T Consensus 104 ~H~~~~~~~q~~~Gl~G~liV~~~~~~-~~l~-~d~~e~~l~l~D~~~~~-~~~~~~~~~~~~~~~~~~~~~liNG~~~- 179 (448)
T 3aw5_A 104 PHPHGLTAKQFYMGQLGLVIVEDSGSD-LGFK-YGVNDLPLVISDRRFIG-GAPVYNPTPMEMIAGFLGNAVLVNGVKD- 179 (448)
T ss_dssp ECCTTTHHHHHHTTCCEEEEEECTTTT-TTCC-BTTTEEEEEEEEEEEET-TEEECCCCHHHHHHCCCCSEEEETTEET-
T ss_pred cCCCCchHHHHhccceEEEEEeCCccc-cCCC-CCCceEEEEEEeeccCC-CcccccccccccccCccccEEEECCccc-
Confidence 99 789999999999999997653 2222 35 89999999999986 432110 00011124578999999997
Q ss_pred CCCCccCCCCCcceEEEEcCCCEEEEEEEEcCCCCeeeEEE--eC---CeeEEEEeeCcccc-ceeeceEEEcCCceEEE
Q 012225 204 RYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRI--QN---HNLLLVETEGHYTS-QQNYTSFEIHVGQSYSF 277 (468)
Q Consensus 204 ~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i--~g---h~~~Via~DG~~~~-p~~~d~i~l~pGqR~dv 277 (468)
+.++|++| +|||||||+|..+.+.|+| +| |+|+|||+||.+++ |..++++.|+|||||||
T Consensus 180 -------------p~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~~~via~DG~~~~~P~~~~~l~l~pgeR~dv 245 (448)
T 3aw5_A 180 -------------AVFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVPMRLIAVDQGFLARPIEVRALFLAPAERAEV 245 (448)
T ss_dssp -------------CEEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEECEEEEEETTEEEEEEEEESCEEECTTCEEEE
T ss_pred -------------ceEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCccEEEEEeCCCccCCceEeceEEECCcceEEE
Confidence 88999999 9999999999999999999 99 99999999999998 99999999999999999
Q ss_pred EEEecCCCCcceEEEEEecccccc----------cccccceEEEEEEcCCCCCCCCCCCCCCCCCcccccccCCcccccc
Q 012225 278 LVTMDQNASSDYYIVASARFVNES----------FWQRVTGVAILHYSNSKGAASGPLPEAPSDIYNQWAAMTQPRSIRQ 347 (468)
Q Consensus 278 ~v~~~~~~g~~y~i~~~~~~~~~~----------~~~~~~~~ail~y~~~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~ 347 (468)
+|++++ + .|||++.....+.. ........++++|.++..... |. .+..
T Consensus 246 lv~~~~--~-~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---p~----------~L~~------ 303 (448)
T 3aw5_A 246 VVELGE--G-VYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGKGEAVP---VE----------ALSD------ 303 (448)
T ss_dssp EEEECS--E-EEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEECCCCC---CC----------CCSC------
T ss_pred EEECCC--C-ceEEEccccccccCccccccccccCCCCCceEEEEEEcCCCCCCC---cc----------ccCC------
Confidence 999983 5 89999875432110 011134567788865432110 11 0000
Q ss_pred CCCCCCCCCCCCCCCCCCccccceEEEEecCCCcccCCeEEEEEcCeeccCCCCchhhhcccCCCcccccCCCCCCCCCC
Q 012225 348 NTSASGARPNPQGSFHYGSINITDTYVLRSLPPVTIDGKVRSTLNGISFVKPETPIRLADKYNVKGAYKLDFPNKPLTRP 427 (468)
Q Consensus 348 ~l~~~~~~~~p~~~~~~~~~~~~~~i~l~~~~~~~~~g~~~~~iN~~s~~~p~~P~l~~~~~~~~~~~~~~~~~~p~~~~ 427 (468)
+ +..+.+ ...++++.+... ...|+|||++|..+ .|.
T Consensus 304 -l---p~~~~~--------~~~~~~~~l~~~-------~~~~~iNg~~~~~~-~p~------------------------ 339 (448)
T 3aw5_A 304 -P---PPEPPK--------PTRTRRFALSLS-------GMQWTINGMFWNAS-NPL------------------------ 339 (448)
T ss_dssp -C---CCCCCC--------CSEEEEEEEEEE-------TTEEEETTBCCCTT-CTT------------------------
T ss_pred -C---CCCCCC--------CCceEEEEEeCC-------CceeeECCCcCCCC-CCc------------------------
Confidence 0 000111 245677777542 12599999999531 221
Q ss_pred CCcceEEEE-ecCCcEEEEEEecCC-CCCCceeccCCCceeeC
Q 012225 428 PRTDRSLIN-ATYKGFIEIILQNND-TKMQSFHMDGYSFFVVG 468 (468)
Q Consensus 428 ~~~~~~~~~-~~~g~~Veivi~N~~-~~~HP~HLHGh~F~Vlg 468 (468)
+. ++.|++|+|+|+|.+ .+.||||||||+||||+
T Consensus 340 -------~~~~~~g~~v~~~i~N~~~~~~HP~HLHG~~F~Vl~ 375 (448)
T 3aw5_A 340 -------FEHVSVEGVELWEIVNDKASMPHPMHLHGFPMWIIE 375 (448)
T ss_dssp -------CCCEEECEEEEEEEEECSSSCCEEEEESSSCBEEEE
T ss_pred -------eeccCCCCeEEEEEEcCCCCCCcCEEECCceEEEEE
Confidence 12 467999999999998 88999999999999985
No 14
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=100.00 E-value=1.5e-65 Score=532.02 Aligned_cols=353 Identities=17% Similarity=0.237 Sum_probs=263.3
Q ss_pred cccCccEEEEEEEEEEEECC-CCceEEEEEEcCcCCCceEEEecCCEEEEEEEeCCCCCceeecCcccCCCCCCCCCCCC
Q 012225 25 FAEDDTIFYDFKVSYITASP-LGVPQQVIAINGKFPGAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQG 103 (468)
Q Consensus 25 ~a~~~~~~~~l~~~~~~~~~-dG~~~~~~~~Ng~~PgP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~ 103 (468)
.+.+++++|+|++++..+++ +|+.+.+|+|||++|||+||+++||+|+|+|+|++++++||||||+++. +++||++
T Consensus 45 ~~~~~~~~~~L~~~~~~~~~~~G~~~~~~~~NG~~PGPtIr~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~--~~~DG~p- 121 (481)
T 3zx1_A 45 SKEKNIFHATLEIKENHIELIKGKKTLFYTYNGLVPAPKIEVFEGDKLEILVKNKLKEATTIHWHGVPVP--PDQDGSP- 121 (481)
T ss_dssp CCSTTEEEEEEEEEEEEECCSTTCCEEEEEETTBSSCCBEEEETTCEEEEEEEECSSSCBCCEEETCCCC--GGGSCCT-
T ss_pred ccCCCeEEEEEEEEEEEEEccCCcEEEEEEECCCCCCceEEEECCcEEEEEEEeCCCCCeeEEecCcccC--CccCCCc-
Confidence 34567899999999999986 6999999999999999999999999999999999999999999999874 7899987
Q ss_pred CCCCcCCCCceEEEEEeCCC-ceeeEEeeCc----cccccCCeeecEEEecCCCCCCCCCCCCCcEEEEEeeeeecchHH
Q 012225 104 TNCPIPSQWNWTYQFQVKDQ-IGSFFYFPSL----NLQRVSGGFGPVIINNRKVIPIPFDQPEGDIIFLIGDWYTRNHTA 178 (468)
Q Consensus 104 tq~~I~PG~~~~y~f~~~~~-~Gt~wyH~H~----~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~ 178 (468)
||+|+||++|+|+|+++++ +||||||||. +.|+.+||+|+|||++++.....+ ++++ ++|+||+++...+
T Consensus 122 -q~~I~PG~s~~Y~f~~~~~~~GT~WYH~H~~~~t~~q~~~GL~G~lIV~~~~~~~~~~---~~~~-l~l~D~~~~~~g~ 196 (481)
T 3zx1_A 122 -HDPILAGEERIYRFEIPQDSAGTYWYHPHPHYTASKQVFMGLAGAFVIKAKKDALSHL---KEKD-LMISDLRLDENAQ 196 (481)
T ss_dssp -TSCBCTTCEEEEEEECCTTCCEEEEEECCCTTTHHHHHHTTCCEEEEEECSSCTTTTS---EEEE-EEEEEECCBTTSC
T ss_pred -cCcCCCCCeEEEEEeCCCCCCceEEEeecCCCcchhhhhccceEEEEEcCccccccCC---Ccee-EEEEEEeccCCCc
Confidence 9999999999999999643 8999999995 689999999999999976533222 4555 9999999976543
Q ss_pred HHH-HhhcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceEEEEcCCCEEEEEEEEcCCCCeeeEEEeCCeeEEEEeeCc
Q 012225 179 LRT-ALDSGKDLDMPDGVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGH 257 (468)
Q Consensus 179 ~~~-~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~Via~DG~ 257 (468)
+.. ..........++.++|||+.. +.++|++|+ ||||||+|..+.+.|+|+||+|+|||+||.
T Consensus 197 ~~~~~~~~~~~g~~gd~~lvNG~~~--------------p~l~v~~g~--RlRliNa~~~~~~~l~i~g~~~~vIa~DGg 260 (481)
T 3zx1_A 197 IPNNNLNDWLNGREGEFVLINGQFK--------------PKIKLATNE--RIRIYNATAARYLNLRIQGAKFILVGTDGG 260 (481)
T ss_dssp CCCCCHHHHHHCCCCSEEEETTEES--------------CEEEEETTE--EEEEEECCSSCCEEEEETTCEEEEEEETTE
T ss_pred cccccchhhccCCcCCEEEECCccC--------------ceEEecCCC--EEEEEecCCCeEEEEEECCCceEEEEcCCC
Confidence 210 000000113578999999986 799999999 999999999999999999999999999987
Q ss_pred cc-cceeeceEEEcCCceEEEEEEecCCCCcceEEEEEecccccc-cccccceEEEEEEcCCCCCCCCCCCCCCCCCccc
Q 012225 258 YT-SQQNYTSFEIHVGQSYSFLVTMDQNASSDYYIVASARFVNES-FWQRVTGVAILHYSNSKGAASGPLPEAPSDIYNQ 335 (468)
Q Consensus 258 ~~-~p~~~d~i~l~pGqR~dv~v~~~~~~g~~y~i~~~~~~~~~~-~~~~~~~~ail~y~~~~~~~~~~~p~~~p~~~~~ 335 (468)
++ +|+.++++.|+|||||||+|++++ ++ .|.+.+........ .........+++...... ..++|.
T Consensus 261 ~~~~P~~~~~l~l~pgeR~dvlv~~~~-~~-~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~lP~-------- 328 (481)
T 3zx1_A 261 LIEKTIYKEELFLSPASRVEVLIDAPK-DG-NFKLESAYYDRDKMMVKEEPNTLFLANINLKKE--NVELPK-------- 328 (481)
T ss_dssp EEEEEEEESSEEECTTCEEEEEEECSS-CE-EEEEEECCCCCCCSSCCCCCCCEEEEEEEEECC--CCCCCS--------
T ss_pred ccCCceEeCeEEECCccEEEEEEEcCC-Cc-EEEEEEecccccCccccCCCCceeEEEEecCCC--CccCCc--------
Confidence 65 699999999999999999999985 45 78887754322100 000122333444432211 111221
Q ss_pred ccccCCccccccCCCCCCCCCCCCCCCCCCccccceEEEEecCCCcccC-----Ce--------EEEEEcCeeccCCCCc
Q 012225 336 WAAMTQPRSIRQNTSASGARPNPQGSFHYGSINITDTYVLRSLPPVTID-----GK--------VRSTLNGISFVKPETP 402 (468)
Q Consensus 336 ~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~i~l~~~~~~~~~-----g~--------~~~~iN~~s~~~p~~P 402 (468)
. +.+.+. .+. +..++++.+..... ... +. ..|+|||+.|.. ..|
T Consensus 329 --~----------l~~~~~--~~~-------~~~~r~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~iNG~~~~~-~~~ 385 (481)
T 3zx1_A 329 --N----------LKIFKP--SEE-------PKEFKEIIMSEDHM-QMHGMMGKSEGELKIALASMFLINRKSYDL-KRI 385 (481)
T ss_dssp --C----------SCCCCC--CCC-------CCEEEEEEEEECCS-TTTTGGGCCHHHHHHHHHTTEEETTBCCCT-TCC
T ss_pred --c----------ccCCCC--CCC-------CCcEEEEEEeccch-hcccccccccccccccccceeEECCEeCCC-CCc
Confidence 0 000000 111 23556666654210 000 01 249999999831 111
Q ss_pred hhhhcccCCCcccccCCCCCCCCCCCCcceEEEEecCCcEEEEEEecCCCCCCceeccCCCceee
Q 012225 403 IRLADKYNVKGAYKLDFPNKPLTRPPRTDRSLINATYKGFIEIILQNNDTKMQSFHMDGYSFFVV 467 (468)
Q Consensus 403 ~l~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~Veivi~N~~~~~HP~HLHGh~F~Vl 467 (468)
.+.++.|++|+|+|.|.+.+.||||||||+|+||
T Consensus 386 -------------------------------~~~~~~G~~v~w~l~N~~~~~Hp~HlHG~~F~vl 419 (481)
T 3zx1_A 386 -------------------------------DLSSKLGVVEDWIVINKSHMDHPFHIHGTQFELI 419 (481)
T ss_dssp -------------------------------CEEEETTCCEEEEEEECSSSCEEEEETTCCEEEE
T ss_pred -------------------------------eEEeCCCCEEEEEEEcCCCCceeEEEeccEEEEE
Confidence 1456889999999999999999999999999997
No 15
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=100.00 E-value=6.3e-65 Score=527.08 Aligned_cols=247 Identities=18% Similarity=0.277 Sum_probs=209.5
Q ss_pred CccEEEEEEEEEEEECCCCceEEEEEEcCcCCCceEEEecCCEEEEEEEeCCCCCceeecCcccCCCCCCCCCCCCCCCC
Q 012225 28 DDTIFYDFKVSYITASPLGVPQQVIAINGKFPGAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQGTNCP 107 (468)
Q Consensus 28 ~~~~~~~l~~~~~~~~~dG~~~~~~~~Ng~~PgP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~ 107 (468)
+..++|+|++++..++++|+.+.+|+|||++|||+||+++||+|+|+|+|+++++++|||||+++. +++||++ ||+
T Consensus 15 ~~~~~~~l~~~~~~~~~~G~~~~~~~~NG~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~--~~~DG~p--~~~ 90 (488)
T 3od3_A 15 DARNRIQLTIGAGQSTFGGKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLEVP--GEVDGGP--QGI 90 (488)
T ss_dssp CTTSEEEEEEEEEEEEETTEEEEEEEESSSSBCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCC--HHHHCCT--TCC
T ss_pred CCCeeEEEEEEEEEEccCCeEEEEEEECCcCCCCeEEEeCCeEEEEEEEeCCcCceeEeecccccC--cccCCCC--cCc
Confidence 346889999999999999999999999999999999999999999999999999999999999886 5699987 999
Q ss_pred cCCCCceEEEEEeCCCceeeEEeeCc----cccccCCeeecEEEecCCCCCCCCC--CCCCcEEEEEeeeeecchHHHHH
Q 012225 108 IPSQWNWTYQFQVKDQIGSFFYFPSL----NLQRVSGGFGPVIINNRKVIPIPFD--QPEGDIIFLIGDWYTRNHTALRT 181 (468)
Q Consensus 108 I~PG~~~~y~f~~~~~~Gt~wyH~H~----~~q~~~Gl~G~liV~~~~~~~~~~~--~~~~e~~l~l~d~~~~~~~~~~~ 181 (468)
|+||++|+|+|++.+++||||||||. +.|+.+||+|+|||++++....+++ ...+|++++|+||+++.+.++..
T Consensus 91 i~PG~~~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~GL~G~liV~~~~~~~~~lp~~y~~~d~~lvl~D~~~~~~g~~~~ 170 (488)
T 3od3_A 91 IPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVIVQDKKFSADGQIDY 170 (488)
T ss_dssp BCTTCEEEEEEECCSCSEEEEEECCCTTTHHHHHHTTCCEEEEEECHHHHTTCCCCCBTTTEEEEEEEEECBCTTSSBCC
T ss_pred CcCCCeEEEEEecCCCceeEEEEecCCCcchhhhhccceeEEEEcCccccccCCcccCCccceeEEEEEeeecCCCceec
Confidence 99999999999996558999999996 6899999999999998754332332 23569999999999975543211
Q ss_pred Hhh--cCCCCCCCceEEEcCcCCCCCCCccCCCCCcceEEEEcCCCEEEEEEEEcCCCCeeeEEE-eCCeeEEEEeeCcc
Q 012225 182 ALD--SGKDLDMPDGVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRI-QNHNLLLVETEGHY 258 (468)
Q Consensus 182 ~~~--~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i-~gh~~~Via~DG~~ 258 (468)
... .......++.++|||+.+ |.+.+ +|++|||||||+|..+.+.|++ +||+|+|||+||.+
T Consensus 171 ~~~~~~~~~g~~gd~~lvNG~~~--------------p~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~vIa~DG~~ 235 (488)
T 3od3_A 171 QLDVMTAAVGWFGDTLLTNGAIY--------------PQHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGL 235 (488)
T ss_dssp CCSHHHHHHCCCCSEEEETTBSS--------------CEEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEEEEEETTEE
T ss_pred cccccccccCCCCCEEEEcCCcC--------------ccEec-CCCEEEEEEEccCCCceeeeeecCCCeEEEEEeCCCc
Confidence 000 000123568999999986 66665 5789999999999999999999 69999999999998
Q ss_pred c-cceeeceEEEcCCceEEEEEEecCCCCcceEEEEEe
Q 012225 259 T-SQQNYTSFEIHVGQSYSFLVTMDQNASSDYYIVASA 295 (468)
Q Consensus 259 ~-~p~~~d~i~l~pGqR~dv~v~~~~~~g~~y~i~~~~ 295 (468)
+ +|+.++++.|+|||||||+|++++ ++ .|++++..
T Consensus 236 l~~P~~~~~l~l~pGeR~dvlv~~~~-~~-~~~l~~~~ 271 (488)
T 3od3_A 236 LPEPVKVSELPVLMGERFEVLVEVND-NK-PFDLVTLP 271 (488)
T ss_dssp EEEEEEESCEEECTTCEEEEEEEECT-TC-CEEEEECC
T ss_pred ccCccEeceEEECCCCEEEEEEEeCC-Cc-eEEEEEec
Confidence 6 699999999999999999999995 45 89998754
No 16
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=100.00 E-value=2.9e-62 Score=527.47 Aligned_cols=243 Identities=14% Similarity=0.180 Sum_probs=200.1
Q ss_pred ccEEEEEEEEEEEEC--CCCceEEEEEEcCcCCCceEEEecCCEEEEEEEeCCCCC------------------------
Q 012225 29 DTIFYDFKVSYITAS--PLGVPQQVIAINGKFPGAVLNATTNNNIVINVQNDLDES------------------------ 82 (468)
Q Consensus 29 ~~~~~~l~~~~~~~~--~dG~~~~~~~~Ng~~PgP~i~~~~Gd~v~v~v~N~l~~~------------------------ 82 (468)
.++.|++++++...+ +|+..+++|+|||++|||+|+|++||+|+|+|+|+|+++
T Consensus 31 ~~~~~~i~~~~~~~~~~~~~~~t~~~gyNg~~PGPti~~~~Gd~v~v~~~N~L~~~~~~h~hg~~~~~~~~~~~~~~~~~ 110 (612)
T 3gyr_A 31 VTRETEIALRPTWVRLHPQLPPTLMWGYDGQVPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNTEP 110 (612)
T ss_dssp TTBCEEEEEEEEEECSCTTSCCEEEEEETTBSSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGGSC
T ss_pred CcceEEEEEEEEEEeecCCCCcceEEEECCcccCcEEEEeCCcEEEEEEEECCCCCcccccccccccCCCCCCccccccc
Confidence 457888888887754 466678999999999999999999999999999999654
Q ss_pred -----------------ceeecCcccCCCCCCCCCCCCCCCCcCCCCceEEEEEeCCCceeeEEeeCc----cccccCCe
Q 012225 83 -----------------LLMTWPGIQMRRNSWQDGVQGTNCPIPSQWNWTYQFQVKDQIGSFFYFPSL----NLQRVSGG 141 (468)
Q Consensus 83 -----------------~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~y~f~~~~~~Gt~wyH~H~----~~q~~~Gl 141 (468)
++|||||+++. +++||++ ||+|+||++|+|+|++.+++||||||||. +.|+.+||
T Consensus 111 ~~~~~~~~~~~~~~~~~ttiHwHGl~~~--~~~DGv~--q~~I~PG~~~~Y~f~~~q~~GT~WYHsH~~g~t~~q~~~Gl 186 (612)
T 3gyr_A 111 GRGGVEPNKDVAALPAWSVTHLHGAQTG--GGNDGWA--DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVMAGL 186 (612)
T ss_dssp SCTTCCCCHHHHTCCCCBCEEEETCCCC--TTTSCCG--GGCBCTTCEEEEEECCCSCSEEEEEEECCTTTHHHHTTTTC
T ss_pred cccccccccccccCCCCceEEcCCCccC--CcccCcc--cCccCCCCCEEEEEEcCCCCceEEEeeCCCCcchhhhhccc
Confidence 67899999774 6799977 99999999999999996668999999995 68999999
Q ss_pred eecEEEecCCCCCCCCCCCCCcEEEEEeeeeecchHHHHHH--h-------hc-----C---CCCCCCceEEEcCcCCCC
Q 012225 142 FGPVIINNRKVIPIPFDQPEGDIIFLIGDWYTRNHTALRTA--L-------DS-----G---KDLDMPDGVLINGKGPYR 204 (468)
Q Consensus 142 ~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~--~-------~~-----g---~~~~~~~~~liNG~~~~~ 204 (468)
+|+|||++++....+.+.+++|++|+|+||+++.+.+.... + .. + ......+.++|||+.+
T Consensus 187 ~G~liI~d~~~~~~~~p~~d~e~~lvl~Dw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~~~vNG~~~-- 264 (612)
T 3gyr_A 187 YGTYLVRDDEEDALGLPSGDREIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGRIW-- 264 (612)
T ss_dssp EEEEEEECHHHHTTTCCCGGGEEEEEEEEECEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTEES--
T ss_pred eeEEEEcCccccccCCCCCCccEEEEEEEEecccccccccccccccCCccccccCCCCCCccccCccCceeeecCCcc--
Confidence 99999998765455556779999999999998754332110 0 00 0 0123457899999987
Q ss_pred CCCccCCCCCcceEEEEcCCCEEEEEEEEcCCCCeeeEEEeCC-------eeEEEEeeCcccc-ceee------ceEEEc
Q 012225 205 YNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNH-------NLLLVETEGHYTS-QQNY------TSFEIH 270 (468)
Q Consensus 205 ~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh-------~~~Via~DG~~~~-p~~~------d~i~l~ 270 (468)
+.+.+++ ++|||||||+|..+.+.|+|++| +|+|||+||.+++ |+.+ +.|.|+
T Consensus 265 ------------p~~~v~~-~~yRlRliNas~~~~~~l~i~~h~~~~~~~~~~vIa~DG~~l~~Pv~v~~p~~~~~l~i~ 331 (612)
T 3gyr_A 265 ------------PYADVDD-GWYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLSAA 331 (612)
T ss_dssp ------------CEEEEES-SEEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEEEC
T ss_pred ------------ceEeccC-cEEEEEEEeccCCcceeEEEccCCCccCCceEEEEEeCCCccccceeccCcccccEEEec
Confidence 7788875 57999999999999999999998 4999999999885 5544 589999
Q ss_pred CCceEEEEEEecCCCCcceEE
Q 012225 271 VGQSYSFLVTMDQNASSDYYI 291 (468)
Q Consensus 271 pGqR~dv~v~~~~~~g~~y~i 291 (468)
|||||||+|++++.++ .++.
T Consensus 332 pGeRydVlV~~~~~~~-~~~~ 351 (612)
T 3gyr_A 332 PAERFDLLVDFRALGG-RRLR 351 (612)
T ss_dssp TTCEEEEEEECTTCTT-CEEE
T ss_pred cceEEEEEEECCCCCc-eEEE
Confidence 9999999999998877 4443
No 17
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=100.00 E-value=1.6e-61 Score=513.65 Aligned_cols=249 Identities=14% Similarity=0.175 Sum_probs=212.2
Q ss_pred CccEEEEEEEEEEEECC--CCceEEEEEEcCcCCCceEEEecCCEEEEEEEeCCCCC-----------------------
Q 012225 28 DDTIFYDFKVSYITASP--LGVPQQVIAINGKFPGAVLNATTNNNIVINVQNDLDES----------------------- 82 (468)
Q Consensus 28 ~~~~~~~l~~~~~~~~~--dG~~~~~~~~Ng~~PgP~i~~~~Gd~v~v~v~N~l~~~----------------------- 82 (468)
...++|+|++++....+ ++..+.+|+|||++|||+|++++||+|+|+++|+|++.
T Consensus 30 ~~~~~~~l~~~~~~~~l~~~~~~t~~~~ynG~~PGPtI~~~~Gd~v~V~~~N~L~~~~~~~~~~~~~p~~~~g~p~~~~~ 109 (612)
T 2g23_A 30 EVTRETEIALRPTWVRLHPQLPPTLMWGYDGQVPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNTE 109 (612)
T ss_dssp CTTBCEEEEEEEEEECSCTTSCCEEEEEETTBSSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGGS
T ss_pred CCeEEEEEEEEEEEEEECCCCcceEEEEECCccCCceEEEECCeEeeEEEEECcCCcccccccccccccccCCCcccccc
Confidence 34689999999998764 45689999999999999999999999999999999853
Q ss_pred ------------------ceeecCcccCCCCCCCCCCCCCCCCcCCCCceEEEEEeCCCceeeEEeeCcc----ccccCC
Q 012225 83 ------------------LLMTWPGIQMRRNSWQDGVQGTNCPIPSQWNWTYQFQVKDQIGSFFYFPSLN----LQRVSG 140 (468)
Q Consensus 83 ------------------~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~y~f~~~~~~Gt~wyH~H~~----~q~~~G 140 (468)
++|||||+++. +.+||++ ||+|+||++|+|+|++.+++||||||||.. .|+.+|
T Consensus 110 p~~~g~~~~~~~~~~~~~tsiH~HG~~~~--~~~DG~p--~~~i~PG~s~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~G 185 (612)
T 2g23_A 110 PGRGGVEPNKDVAALPAWSVTHLHGAQTG--GGNDGWA--DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVMAG 185 (612)
T ss_dssp CSCTTCCCCHHHHTCCCCBCEEEETCCCC--TTTSCCG--GGCBCTTCEEEEEECCCSCSCEEEEEECCTTTHHHHTTTT
T ss_pred cccccccccccccccCCceEEEcCCCCCC--CccCCCC--cCCCCCCCeEEEEEEecCCCceEEEecccCCcchhhhhcc
Confidence 89999999886 4599987 899999999999999965799999999975 499999
Q ss_pred eeecEEEecCCCCCCCCCCCCCcEEEEEeeeeecchHH--HHHH-------hhc---C-C----CCCCCceEEEcCcCCC
Q 012225 141 GFGPVIINNRKVIPIPFDQPEGDIIFLIGDWYTRNHTA--LRTA-------LDS---G-K----DLDMPDGVLINGKGPY 203 (468)
Q Consensus 141 l~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~--~~~~-------~~~---g-~----~~~~~~~~liNG~~~~ 203 (468)
|+|+|||++++....+++.+|+|++|+|+||+++.+.+ +... +.. + . ....++.++|||+.+
T Consensus 186 L~G~liV~~~~~~~~~lp~~d~d~~l~l~Dw~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~p~~~~~~gd~~lVNG~~~- 264 (612)
T 2g23_A 186 LYGTYLVRDDEEDALGLPSGDREIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGRIW- 264 (612)
T ss_dssp CEEEEEEECHHHHTTTCCCGGGEEEEEEEEECEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTEES-
T ss_pred ceeEEEEcCcccccccCCCCcceEEEEEEEEeccCCcccccccccccccccccccccccCcccccCCcCCEEEECCccC-
Confidence 99999999876544444567999999999999975421 1000 010 1 0 013579999999997
Q ss_pred CCCCccCCCCCcceEEEEcCCCEEEEEEEEcCCCCeeeEEEeCC-------eeEEEEeeCcccc-ceeec------eEEE
Q 012225 204 RYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNH-------NLLLVETEGHYTS-QQNYT------SFEI 269 (468)
Q Consensus 204 ~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh-------~~~Via~DG~~~~-p~~~d------~i~l 269 (468)
+.++|++| +|||||||+|..+.+.|+|++| +|+|||+||.+++ |+.++ +|.|
T Consensus 265 -------------p~~~V~~g-~yRlRliNas~~r~~~l~i~~h~g~~~~~~~~vIa~DG~~l~~P~~~~~~~~~~~l~l 330 (612)
T 2g23_A 265 -------------PYADVDDG-WYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLSA 330 (612)
T ss_dssp -------------CEEEEESS-EEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEEE
T ss_pred -------------CeEEecCC-eEEEEEEecCCCeEEEEEEcCCCCccCCCcEEEEEeCCeEccCCEEecccCcccEEEE
Confidence 88999999 9999999999999999999999 8999999999995 89998 9999
Q ss_pred cCCceEEEEEEecCCCCcceEEEEEe
Q 012225 270 HVGQSYSFLVTMDQNASSDYYIVASA 295 (468)
Q Consensus 270 ~pGqR~dv~v~~~~~~g~~y~i~~~~ 295 (468)
+|||||||+|++++.+|++|+|+...
T Consensus 331 ~pgeR~dvlVd~~~~~g~~~~L~~~~ 356 (612)
T 2g23_A 331 APAERFDLLVDFRALGGRRLRLVDKG 356 (612)
T ss_dssp CTTCEEEEEEECTTCTTCEEEEEECC
T ss_pred CCcCeEEEEEECCCCCCCEEEEEeCC
Confidence 99999999999998777689998753
No 18
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=100.00 E-value=6e-55 Score=431.81 Aligned_cols=271 Identities=20% Similarity=0.307 Sum_probs=225.0
Q ss_pred ccEEEEEEEEEEEECC-CCceEEEEEEcCcCCCceEEEecCCEEEEEEEeCCCCCceeecCcccCCCCCCCCCCCC-CCC
Q 012225 29 DTIFYDFKVSYITASP-LGVPQQVIAINGKFPGAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQG-TNC 106 (468)
Q Consensus 29 ~~~~~~l~~~~~~~~~-dG~~~~~~~~Ng~~PgP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~-tq~ 106 (468)
.+|+|+|++++..+++ +|+.+.+|+|||++|||+||+++||+|+|+|+|.++++++|||||+++..+.++||+|+ +||
T Consensus 1 ~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~p~~t~~ 80 (318)
T 3g5w_A 1 EKREFDLSIEDTRIVLVGKRDFHTFAFNGQVPAPLIHVMEGDDVTVNVTNMTTLPHTIHWHGMLQRGTWQSDGVPHATQH 80 (318)
T ss_dssp CEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCTTCGGGSCCBTTTBC
T ss_pred CeEEEEEEEEEEEEEcCCCcEEEEEEECCccCCceEEEeCCCEEEEEEEeCCCCceeEEecCcCCCCCcccCCCcccccc
Confidence 4799999999999887 58889999999999999999999999999999999999999999999987789999998 999
Q ss_pred CcCCCCceEEEEEeCCCceeeEEeeCccccc---cCCeeecEEEecCCCCCCCCCCCCCcEEEEEeeeeecchHHHHHHh
Q 012225 107 PIPSQWNWTYQFQVKDQIGSFFYFPSLNLQR---VSGGFGPVIINNRKVIPIPFDQPEGDIIFLIGDWYTRNHTALRTAL 183 (468)
Q Consensus 107 ~I~PG~~~~y~f~~~~~~Gt~wyH~H~~~q~---~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~ 183 (468)
+|+||++++|+|++ +++||||||||...+. .+||+|+|||++++..+.+. .+|+|++|+|+||+++..... .
T Consensus 81 ~i~PG~~~~y~f~~-~~~Gt~wYH~H~~~~~~~~~~Gl~G~lIV~~~~~~~~~~-~~d~e~~l~l~dw~~~~~~~~---~ 155 (318)
T 3g5w_A 81 AIEPGDTFTYKFKA-EPAGTMWYHCHVNVNEHVTMRGMWGPLIVEPKNPLPIEK-TVTKDYILMLSDWVSSWANKP---G 155 (318)
T ss_dssp CBCTTCEEEEEEEC-CSCEEEEEECCSSHHHHHHHSCCEEEEEEECSSCCHHHH-TCCEEEEEEEEEECGGGTTCT---T
T ss_pred cCCCCCEEEEEEEc-CCCEEEEEEccCChhhhhccCCCEEEEEEcCCCcccccc-cccceeEEEEEeecccccccc---c
Confidence 99999999999999 5899999999987543 48999999999875422111 458999999999988643211 1
Q ss_pred hcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceEEEEcCCCEEEEEEEEcCCCCeeeEEEeCCeeEEEEeeCccc-cce
Q 012225 184 DSGKDLDMPDGVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYT-SQQ 262 (468)
Q Consensus 184 ~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~Via~DG~~~-~p~ 262 (468)
..+.....++.++|||+.+.. ...+++++|++|||||+|++.. .+.||+|||.|+||+.||.++ +|.
T Consensus 156 ~~~~~~~~~d~~~ING~~~~~-----------~~~l~v~~G~~vrlrliN~~~~-~h~~hlhGh~f~vi~~dG~~~~~p~ 223 (318)
T 3g5w_A 156 EGGIPGDVFDYYTINAKSFPE-----------TQPIRVKKGDVIRLRLIGAGDH-VHAIHTHGHISQIAFKDGFPLDKPI 223 (318)
T ss_dssp CCCCTTCCCCEEEETTBCBTS-----------SCCEEECTTCEEEEEEEECSSS-CEEEEETTSCEEEEEETTEEEEEEE
T ss_pred cCCCCCCcCcEEEEcCcCCCC-----------CccEEeCCCCEEEEEEEeCCCc-eEEEEECCcEEEEEecCCcccCCCc
Confidence 112222357899999998732 2459999999999999999976 699999999999999999988 588
Q ss_pred eeceEEEcCCceEEEEEEecCCCCcceEEEEEecccccc-cccccceEEEEEEcCCC
Q 012225 263 NYTSFEIHVGQSYSFLVTMDQNASSDYYIVASARFVNES-FWQRVTGVAILHYSNSK 318 (468)
Q Consensus 263 ~~d~i~l~pGqR~dv~v~~~~~~g~~y~i~~~~~~~~~~-~~~~~~~~ail~y~~~~ 318 (468)
.+|++.|+||||+||++++++ +| .|.++.+....... ........++|+|++..
T Consensus 224 ~~dtv~l~pger~~v~~~a~~-pG-~w~~hCH~~~H~~~g~~~~~Gm~~~i~~~g~~ 278 (318)
T 3g5w_A 224 KGDTVLIGPGERYDVILNMDN-PG-LWMIHDHVDTHTTNGDKPDGGIMTTIEYEEVG 278 (318)
T ss_dssp EESEEEECTTCEEEEEEECCS-CS-EEEEEESSGGGSCBTTBSSCBSEEEEEETTTC
T ss_pred cccEEEECCCCEEEEEEECCC-Ce-eEEEEeccHHHhhccCcCCCCCEEEEEECCCC
Confidence 999999999999999999995 67 88888876533211 00113456899998753
No 19
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=100.00 E-value=8.6e-54 Score=427.84 Aligned_cols=271 Identities=19% Similarity=0.411 Sum_probs=224.5
Q ss_pred ccEEEEEEEEEEEECCC-CceEEEEEEcCcCCCceEEEecCCEEEEEEEeCCCCCceeecCcccCCCCCCCCCCCC-CCC
Q 012225 29 DTIFYDFKVSYITASPL-GVPQQVIAINGKFPGAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQG-TNC 106 (468)
Q Consensus 29 ~~~~~~l~~~~~~~~~d-G~~~~~~~~Ng~~PgP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~-tq~ 106 (468)
.+|+|+|++++..++++ |+.+.+|+|||++|||+|+|++||+|+|+|+|.++++++|||||+++..++|+||+|+ +||
T Consensus 2 ~~~~~~l~~~~~~~~~~~g~~~~~~~~NG~~pGP~I~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGvp~vtq~ 81 (339)
T 2zwn_A 2 AEREFDMTIEEVTIKVAPGLDYKVFGFNGQVPGPLIHVQEGDDVIVNVTNNTSLPHTIHWHGVHQKGTWRSDGVPGVTQQ 81 (339)
T ss_dssp CEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEESSSCBCCEEETCCCTTCGGGSCCBTTTBC
T ss_pred ceEEEEEEEEEEEEEcCCCcEEEEEEECCccCCCeEEEECCCEEEEEEEECCCCCccEEeCCCCcCCCcccCCCCccccC
Confidence 46899999999998875 9999999999999999999999999999999999999999999999988888999998 999
Q ss_pred CcCCCCceEEEEEeCCCceeeEEeeCccc--ccc-CCeeecEEEecCCCCCCCCCCCCCcEEEEEeeeeecchHHHHHHh
Q 012225 107 PIPSQWNWTYQFQVKDQIGSFFYFPSLNL--QRV-SGGFGPVIINNRKVIPIPFDQPEGDIIFLIGDWYTRNHTALRTAL 183 (468)
Q Consensus 107 ~I~PG~~~~y~f~~~~~~Gt~wyH~H~~~--q~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~ 183 (468)
+|+||++|+|+|+++ ++||||||||... |+. +||+|+|||+++.....+ ...|+|++++|+||++...... .
T Consensus 82 ~I~PG~~~~y~f~~~-~~Gt~wyH~H~~~~~q~~~~Gl~G~liV~p~~~~~~~-~~~d~e~~l~l~d~~~~~~~~~---~ 156 (339)
T 2zwn_A 82 PIEAGDSYTYKFKAD-RIGTLWYHCHVNVNEHVGVRGMWGPLIVDPKQPLPIE-KRVTKDVIMMMSTWESAVADKY---G 156 (339)
T ss_dssp CBCTTCEEEEEEECC-SCEEEEEECCSSHHHHTTTSCCEEEEEEECSSCCTTG-GGCSEEEEEEEEEECGGGTTCT---T
T ss_pred ccCCCCeEEEEEECC-CCEEEEEEecCCchhhhhcCCceEeEEecCCCccccc-ccCCceEEEEeeheeccccccc---C
Confidence 999999999999994 8999999999765 777 999999999986542211 1357899999999987422110 0
Q ss_pred hcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceEEEEcCCCEEEEEEEEcCCCCeeeEEEeCCeeEEEEeeCcccc-ce
Q 012225 184 DSGKDLDMPDGVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYTS-QQ 262 (468)
Q Consensus 184 ~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~Via~DG~~~~-p~ 262 (468)
..+.....++.++|||+.+.. ...+++++|++|||||+|++.. .+.||++||.|+||+.||.+++ |.
T Consensus 157 ~~g~~~~~~~~~~ING~~~~~-----------~~~~~v~~G~~vrlrliN~~~~-~h~~hlhGh~f~vi~~DG~~~~~p~ 224 (339)
T 2zwn_A 157 EGGTPMNVADYFSVNAKSFPL-----------TQPLRVKKGDVVKIRFFGAGGG-IHAMHSHGHDMLVTHKDGLPLDSPY 224 (339)
T ss_dssp CCCSTTSCCCEEEETTBCTTS-----------SCCEEECTTCEEEEEEEECSSS-CEEEEETTCCEEEEEETTEEEEEEE
T ss_pred CCCCCccccceEEEccccCCC-----------cccEEECCCCEEEEEEEeCCCc-eEEEEECCcEEEEEEeCCeecCCCc
Confidence 111222357899999998631 2568999999999999999965 8999999999999999999986 78
Q ss_pred eeceEEEcCCceEEEEEEecCCCCcceEEEEEeccccc-ccccccceEEEEEEcCCC
Q 012225 263 NYTSFEIHVGQSYSFLVTMDQNASSDYYIVASARFVNE-SFWQRVTGVAILHYSNSK 318 (468)
Q Consensus 263 ~~d~i~l~pGqR~dv~v~~~~~~g~~y~i~~~~~~~~~-~~~~~~~~~ail~y~~~~ 318 (468)
.+|++.|+||||+||++++++ +| .|+++.+...... .........++|+|++..
T Consensus 225 ~~dtv~l~pg~r~~v~~~~~~-pG-~w~~hch~~~H~~~~~~~~~gm~a~l~~~g~~ 279 (339)
T 2zwn_A 225 YADTVLVSPGERYDVIIEADN-PG-RFIFHDHVDTHVTAGGKHPGGPITVIEYDGVP 279 (339)
T ss_dssp EESEEEECTTCEEEEEEECCS-CS-EEEEEECCGGGSCBTTBSSCSSEEEEEETTSC
T ss_pred EEEEEEECCCCEEEEEEEeCC-Ce-eEEEEEechhhcccccccCCCcEEEEEECCCC
Confidence 899999999999999999986 57 7888887654210 000124457999998753
No 20
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=100.00 E-value=1.2e-53 Score=482.19 Aligned_cols=389 Identities=12% Similarity=0.127 Sum_probs=265.0
Q ss_pred ccccCccEEEEEEEEEEEE--CCCC--------------------------ceEEEE-------EEcCc--------CCC
Q 012225 24 CFAEDDTIFYDFKVSYITA--SPLG--------------------------VPQQVI-------AINGK--------FPG 60 (468)
Q Consensus 24 ~~a~~~~~~~~l~~~~~~~--~~dG--------------------------~~~~~~-------~~Ng~--------~Pg 60 (468)
..+++.+|+|.+.|.+..+ +|.| +.++++ +||+. +||
T Consensus 15 ~~~~~~~r~y~i~~~~~~w~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~PG 94 (1065)
T 2j5w_A 15 TPAWAKEKHYYIGIIETTWDYASDHGEKKLISVDTEHSNIYLQNGPDRIGRLYKKALYLQYTDETFRTTIEKPVWLGFLG 94 (1065)
T ss_dssp -----CEEEEEEEEEEEEEESCCCCCCCBBTTBCSSSTHHHHCCCSSCCCSEEEEEEEEEESSSSTTSBCCCCGGGTTSC
T ss_pred cccccceeEEEEEEEEEEeecCCCCcCCCccccchhhhheecccCCcccCCeEeEEEEEEecceeecCCcccccccCCcC
Confidence 4455779999999999875 3322 334444 57877 999
Q ss_pred ceEEEecCCEEEEEEEeCCCCCceeecCcccCC----CCCCCCCCCC---CCCCcCCCCceEEEEEeCCC---------c
Q 012225 61 AVLNATTNNNIVINVQNDLDESLLMTWPGIQMR----RNSWQDGVQG---TNCPIPSQWNWTYQFQVKDQ---------I 124 (468)
Q Consensus 61 P~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~----~~~~~DGv~~---tq~~I~PG~~~~y~f~~~~~---------~ 124 (468)
|+||+++||+|+|+|+|+++++++|||||+++. +.+|+||+++ |||+|+||++|+|+|+++++ +
T Consensus 95 P~Ir~~~GD~v~v~v~N~l~~~tsiHwHGl~~~~~~DG~~~~dg~~g~~~t~~~I~PG~t~tY~f~~~~~~gp~~~d~~a 174 (1065)
T 2j5w_A 95 PIIKAETGDKVYVHLKNLASRPYTFHSHGITYYKEHEGAIYPDNTTDFQRADDKVYPGEQYTYMLLATEEQSPGEGDGNC 174 (1065)
T ss_dssp CCEEEETTCEEEEEEEEESSSCBCCEESSSBCCGGGCCCCSCCCCCGGGTGGGCBCTTCEEEEEEECCSTTSCCTTSCSE
T ss_pred CeEEEeCCeEEEEEEEECCCCCeeEEeCCccCCcccCCcccCCCCCcccccccccCCCCEEEEEEEeccccCCccCCCCc
Confidence 999999999999999999999999999999987 4577888874 79999999999999999743 4
Q ss_pred eeeEEeeCcccc--ccCCeeecEEEecCCCCCCCCC-CCCCcEEEEEeee------eecchHHHHHHh-hcCCC----C-
Q 012225 125 GSFFYFPSLNLQ--RVSGGFGPVIINNRKVIPIPFD-QPEGDIIFLIGDW------YTRNHTALRTAL-DSGKD----L- 189 (468)
Q Consensus 125 Gt~wyH~H~~~q--~~~Gl~G~liV~~~~~~~~~~~-~~~~e~~l~l~d~------~~~~~~~~~~~~-~~g~~----~- 189 (468)
||||||||...| +.+||+|+|||++++....|.+ .+|+|++|+|+|| ++... +...+ +.+.. .
T Consensus 175 GT~wYHsH~~~~~qv~~GL~G~lIV~~~~~~~~p~~~~~d~e~~l~l~d~d~~~~w~~~~~--~~~~~~~p~~~~~~~~~ 252 (1065)
T 2j5w_A 175 VTRIYHSHIDAPKDIASGLIGPLIICKKDSLDKEKEKHIDREFVVMFSVVDENFSWYLEDN--IKTYCSEPEKVDKDNED 252 (1065)
T ss_dssp EEEEEECCSSHHHHHHHTCEEEEEEECTTCBSSSSBTTCCEEEEEEEEEEEGGGSTTHHHH--HHHHCSCGGGCCTTCHH
T ss_pred eEEEEEeccCchhHhhCccEEEEEEecCcccCCCccCCCccceEEEeeeecCCccccccch--hhhhhcCcccccccccc
Confidence 999999998754 6799999999999875333322 4689999999954 44321 11111 11100 0
Q ss_pred --CCCceEEEcCcCCCCCCCccCCCCCcceEEEEcCCCEEEEEEEEcCCC-CeeeEEEeCCeeEEEEeeCccccceeece
Q 012225 190 --DMPDGVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTS-TSLNFRIQNHNLLLVETEGHYTSQQNYTS 266 (468)
Q Consensus 190 --~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~Via~DG~~~~p~~~d~ 266 (468)
..++.++|||+.+. ..+.+++++|++|||||||+|.. ..+.|||+||.|+| +|..+|+
T Consensus 253 ~~~~~~~~~iNG~~~~-----------~~~~l~v~~Ge~vRlRliNag~~~~~~~~~i~Gh~f~v--------~p~~~dt 313 (1065)
T 2j5w_A 253 FQQSNRMYSVNGYTFG-----------SLSGLSMCAEDRVKWYLFGMGNEVDVHAAFFHGQALTN--------KNYRIDT 313 (1065)
T ss_dssp HHHHTEEEEETTEETT-----------CCCCCEEETTCEEEEEEEECSSTTCCEEEEETTCCEEE--------TTEEESE
T ss_pred ccccCcEEEECCccCC-----------CCcceEECCCCEEEEEEEcCCcccceeEEEEcCCEEEE--------CCeeecE
Confidence 02357999999851 23679999999999999999975 68999999999993 5678999
Q ss_pred EEEcCCceEEEEEEecCCCCcceEEEEEecccccccccccceEEEEEEcCCCCCCCCCCCCCCCCCcccccccCCccccc
Q 012225 267 FEIHVGQSYSFLVTMDQNASSDYYIVASARFVNESFWQRVTGVAILHYSNSKGAASGPLPEAPSDIYNQWAAMTQPRSIR 346 (468)
Q Consensus 267 i~l~pGqR~dv~v~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~ 346 (468)
+.|+||||+||+|++++ +| .|+|+++...... ....+.++|.+....++.+.|. .+. ...+ +..++.+.
T Consensus 314 v~I~pGer~dVlv~~~~-pG-~y~i~~h~~~h~~-----~Gm~~~~~V~~~~~~~~~~~~~-g~~--~~~~-~i~A~e~~ 382 (1065)
T 2j5w_A 314 INLFPATLFDAYMVAQN-PG-EWMLSCQNLNHLK-----AGLQAFFQVQECNKSSSKDNIR-GKH--VRHY-YIAAEEII 382 (1065)
T ss_dssp EEECBTCEEEEEEECCS-CE-EEEEEECSHHHHH-----TTCEEEEEEECSCCCCCCCCCT-TSE--EEEE-EEEEEEEE
T ss_pred EEECCCcEEEEEEEeCC-Ce-eEEEEecCcchhh-----CCCEEEEEEecCCCcccccccc-ccc--eeEE-EEeceecc
Confidence 99999999999999997 67 9999988654322 3567888887654433222222 110 1111 22334445
Q ss_pred cCCCCCCC------CCCCCCCCCCCccccceEEEEecCCCcccCCeEEEEEcCeeccCCCCchhhhcccCCCcccccCCC
Q 012225 347 QNTSASGA------RPNPQGSFHYGSINITDTYVLRSLPPVTIDGKVRSTLNGISFVKPETPIRLADKYNVKGAYKLDFP 420 (468)
Q Consensus 347 ~~l~~~~~------~~~p~~~~~~~~~~~~~~i~l~~~~~~~~~g~~~~~iN~~s~~~p~~P~l~~~~~~~~~~~~~~~~ 420 (468)
+++.+... ++.|.+++ ..++ |.+... .++++++-.++ +.|.. +.|..+.+
T Consensus 383 wdy~~~~~~~~~~~~~~~~~s~-------~~~~-l~~~~~-~ig~~y~k~v~-~~y~d--------------~~f~~~~~ 438 (1065)
T 2j5w_A 383 WNYAPSGIDIFTKENLTAPGSD-------SAVF-FEQGTT-RIGGSYKKLVY-REYTD--------------ASFTNRKE 438 (1065)
T ss_dssp EESCTTSBCTTTCCBTTCTTCT-------THHH-HCCBTT-BCCSEEEEEEE-EEESS--------------TTCCSBCC
T ss_pred cccCCCCcccccccccCCCccc-------chhh-hccCCc-ccCceEeeeee-ecccC--------------CceEEcCc
Confidence 55544332 22233221 1111 222221 35566666666 66642 12222211
Q ss_pred CCCCCCCCCcceEEEEecCCcEEEEEEecCCCCCCceeccCCCceeeC
Q 012225 421 NKPLTRPPRTDRSLINATYKGFIEIILQNNDTKMQSFHMDGYSFFVVG 468 (468)
Q Consensus 421 ~~p~~~~~~~~~~~~~~~~g~~Veivi~N~~~~~HP~HLHGh~F~Vlg 468 (468)
..|.......-..++.++.|++|+|+|+|..+..|+||+||+.|++++
T Consensus 439 ~~~~~~~~g~lgpvi~a~~gd~i~i~f~N~~~~~~s~h~hG~~f~~~~ 486 (1065)
T 2j5w_A 439 RGPEEEHLGILGPVIWAEVGDTIRVTFHNKGAYPLSIEPIGVRFNKNN 486 (1065)
T ss_dssp CCGGGGGGTTSCCCEEEETTEEEEEEEEECSSSCBCCEEESSBCCGGG
T ss_pred CCcccccccccCceEEEeCCCEEEEEEEECCCCCccCcccceeeeccC
Confidence 111100111123478899999999999999999999999999999863
No 21
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=100.00 E-value=2.8e-51 Score=407.65 Aligned_cols=262 Identities=17% Similarity=0.252 Sum_probs=221.0
Q ss_pred ccCccEEEEEEEEEEEECC-CCceEEEEEEcCcCCCceEEEecCCEEEEEEEeCCC--CCceeecCcccCCCCCCCCCCC
Q 012225 26 AEDDTIFYDFKVSYITASP-LGVPQQVIAINGKFPGAVLNATTNNNIVINVQNDLD--ESLLMTWPGIQMRRNSWQDGVQ 102 (468)
Q Consensus 26 a~~~~~~~~l~~~~~~~~~-dG~~~~~~~~Ng~~PgP~i~~~~Gd~v~v~v~N~l~--~~~siH~HG~~~~~~~~~DGv~ 102 (468)
..+++++|+|++++..+++ ||..+.+|+|||++|||+|++++||+|+|+|+|.++ .+++|||||+. .+||++
T Consensus 34 ~~~~~~~~~l~~~~~~~~~~~G~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~-----~~dG~~ 108 (327)
T 1kbv_A 34 DYPAKVRVKMETVEKTMKMDDGVEYRYWTFDGDVPGRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAAT-----GQGGGA 108 (327)
T ss_dssp SSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC-----SGGGGT
T ss_pred CCCCEEEEEEEEEEEEEEeCCCcEEEEEEECCccCCCeEEEeCCCEEEEEEEECCCCCCceeeEeCccc-----cCCCCC
Confidence 3456799999999999888 799999999999999999999999999999999986 58999999984 378876
Q ss_pred CCCCCcCCCCceEEEEEeCCCceeeEEeeCc---cccccCCeeecEEEecCCCCCCCCCCCCCcEEEEEeeeeecchHH-
Q 012225 103 GTNCPIPSQWNWTYQFQVKDQIGSFFYFPSL---NLQRVSGGFGPVIINNRKVIPIPFDQPEGDIIFLIGDWYTRNHTA- 178 (468)
Q Consensus 103 ~tq~~I~PG~~~~y~f~~~~~~Gt~wyH~H~---~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~- 178 (468)
. ...|.||++++|+|++ +++||||||||. +.|+.+||+|+|||++++.. +.+|+|++++++||+++....
T Consensus 109 ~-~~~i~PG~~~~y~f~~-~~~Gt~wyH~h~~~~~~~~~~Gl~G~~iV~~~~~~----p~~d~e~~l~~~d~~~~~~~~~ 182 (327)
T 1kbv_A 109 A-ATFTAPGRTSTFSFKA-LQPGLYIYHCAVAPVGMHIANGMYGLILVEPKEGL----PKVDKEFYIVQGDFYTKGKKGA 182 (327)
T ss_dssp T-TTCBCTTEEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTCC----CCCSEEEEEEEEEECBSSCTTC
T ss_pred c-ceeecCCCEEEEEEEC-CCCeEEEEEeCCCChhhhhhcceEEEEEEecCCCC----CCCceEEEEEeeeeeccCcccc
Confidence 4 2359999999999999 589999999995 68999999999999986532 246899999999999875210
Q ss_pred -------HHHHhhcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceEEEEcCCCEEEEEEEEcCCCCeeeEEEeCCeeEE
Q 012225 179 -------LRTALDSGKDLDMPDGVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLL 251 (468)
Q Consensus 179 -------~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~V 251 (468)
+.... ...++.++|||+.+..+ ..+.+++++|++|||||+|+|....+.||++||.|+|
T Consensus 183 ~g~~~~~~~~~~-----~~~~~~~~iNG~~~~~~---------~~~~l~v~~G~~vRlRliN~~~~~~~~~~l~Gh~f~v 248 (327)
T 1kbv_A 183 QGLQPFDMDKAV-----AEQPEYVVFNGHVGALT---------GDNALKAKAGETVRMYVGNGGPNLVSSFHVIGEIFDK 248 (327)
T ss_dssp CEEECBCHHHHH-----HTCCSEEEETTSTTTTS---------GGGCEEEETTEEEEEEEEEEESSCCEEEEEETCCBSE
T ss_pred ccccccChhHhc-----cCCCceEEEcCcccCCC---------CceeEEeCCCCEEEEEEECCCCCCceeEEEeCCEEEE
Confidence 11111 12468999999997542 1267999999999999999998889999999999999
Q ss_pred EEeeCccccceeeceEEEcCCceEEEEEEecCCCCcceEEEEEecccccccccccceEEEEEEcCCC
Q 012225 252 VETEGHYTSQQNYTSFEIHVGQSYSFLVTMDQNASSDYYIVASARFVNESFWQRVTGVAILHYSNSK 318 (468)
Q Consensus 252 ia~DG~~~~p~~~d~i~l~pGqR~dv~v~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~ 318 (468)
|+.||.+++|..++++.|+||||+||++++++ +| +|||+++...... .....|+|+|++..
T Consensus 249 i~~DG~~~~p~~~d~l~l~pGer~dv~v~~~~-pG-~y~l~~h~~~~~~----~~g~~a~l~~~g~~ 309 (327)
T 1kbv_A 249 VYVEGGKLINENVQSTIVPAGGSAIVEFKVDI-PG-NYTLVDHSIFRAF----NKGALGQLKVEGAE 309 (327)
T ss_dssp EEGGGSSCEECSBSEEEECTTEEEEEEEEECS-CE-EEEEEESSTHHHH----HSSCEEEEEEESCC
T ss_pred EEcCCCcCCCCceeEEEECCCCEEEEEEEeCC-Ce-EEEEEeccccccc----cCCcEEEEEECCCC
Confidence 99999999999999999999999999999996 67 9999997654321 14568999998754
No 22
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=100.00 E-value=7e-49 Score=383.62 Aligned_cols=234 Identities=17% Similarity=0.215 Sum_probs=203.0
Q ss_pred cEEEEEEEEEEEECCC-CceEEEEEEcCcCCCceEEEecCCEEEEEEEeCCCCCceeecCcccCCCCCCCCCCCC-CCCC
Q 012225 30 TIFYDFKVSYITASPL-GVPQQVIAINGKFPGAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQG-TNCP 107 (468)
Q Consensus 30 ~~~~~l~~~~~~~~~d-G~~~~~~~~Ng~~PgP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~-tq~~ 107 (468)
+|+|+|++++..+.+. |..+.+|+|||++|||+||+++||+|+|+|+|.++++++|||||+++ +++||+|+ +||+
T Consensus 34 ~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~~~~~~~iH~HG~~~---~~~DG~p~~~~~~ 110 (288)
T 3gdc_A 34 LREWDIVAVDKDFEIAPGIIFKGWSYNGRIPGPTLWAREGDALRIHFTNAGAHPHTIHFHGVHR---ATMDGTPGIGAGS 110 (288)
T ss_dssp EEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECSSSCBCCEESSCCC---GGGSCCTTSTTCS
T ss_pred EEEEEEEEEEEEEEeCCCcEEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCcccEEeccccc---cccCCCCCcccee
Confidence 5899999999887764 99999999999999999999999999999999999999999999963 68999998 9999
Q ss_pred cCCCCceEEEEEeCCCceeeEEeeCcc---ccccCCeeecEEEecCCCCCCCCCCCCCcEEEEEeeeeecchHHHHHHhh
Q 012225 108 IPSQWNWTYQFQVKDQIGSFFYFPSLN---LQRVSGGFGPVIINNRKVIPIPFDQPEGDIIFLIGDWYTRNHTALRTALD 184 (468)
Q Consensus 108 I~PG~~~~y~f~~~~~~Gt~wyH~H~~---~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~ 184 (468)
|+||++++|+|++ +++||||||||.. .|+.+||+|+|||++++.. +..|+|++|+++||+.++
T Consensus 111 i~PG~~~~y~f~~-~~~Gt~~yH~H~~~~~~~~~~Gl~G~liV~~~~~~----~~~d~e~~l~~~d~~~~~--------- 176 (288)
T 3gdc_A 111 IAPGQSFTYEFDA-TPFGTHLYHCHQSPLAPHIAKGLYGGFIVEPKEGR----PPADDEMVMVMNGYNTDG--------- 176 (288)
T ss_dssp BCTTCEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECSSCC----CCCSEEEEEEEEEECCSS---------
T ss_pred ECCCCEEEEEEEc-CCCccEEEEecCcchHHHHhCcCeEEEEEeCCccC----CCCcceEEEEEeeEecCC---------
Confidence 9999999999999 6899999999986 6899999999999997642 234799999999998762
Q ss_pred cCCCCCCCceEEEcCcCCCCCCCccCCCCCcceEEEEcCCCEEEEEEEEcCCCC-eeeEEEeCCeeEEEEeeCcccccee
Q 012225 185 SGKDLDMPDGVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTST-SLNFRIQNHNLLLVETEGHYTSQQN 263 (468)
Q Consensus 185 ~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~-~~~~~i~gh~~~Via~DG~~~~p~~ 263 (468)
+ ..++.++|||+.+.+ ..+.+++++|++||||++|++... .+.||++||.|+|++.++....+..
T Consensus 177 -g---~~~~~~~iNG~~~~~----------~~~~l~v~~Ge~vr~~l~N~g~~~~~H~fHlhG~~f~v~~~g~~~~~~~~ 242 (288)
T 3gdc_A 177 -G---DDNEFYSVNGLPFHF----------MDFPVKVKQHELVRIHLINVLEYDPINSFHIHGNFFHYYPTGTMLTPSEY 242 (288)
T ss_dssp -T---TCCSEEEETTSTTHH----------HHSCEEEETTCCEEEEEEECCCSSSEEEEEETTCCEEEEETTCCSSCSEE
T ss_pred -C---CCcceEEECcccccc----------cCcccccCCCCEEEEEEEeCCCCCcceeEEEcCCEEEEEcCCCccCCCce
Confidence 1 246789999998621 124689999999999999999653 7999999999999984443334688
Q ss_pred eceEEEcCCceEEEEEEecCCCCcceEEEEEec
Q 012225 264 YTSFEIHVGQSYSFLVTMDQNASSDYYIVASAR 296 (468)
Q Consensus 264 ~d~i~l~pGqR~dv~v~~~~~~g~~y~i~~~~~ 296 (468)
.|++.|+||||++++++++ .+| .|.+..+..
T Consensus 243 ~Dtv~v~pg~~~~v~~~~~-~pG-~~~~hCH~~ 273 (288)
T 3gdc_A 243 TDTISQVQGQRGILELRFP-YPG-KFMFHAHKT 273 (288)
T ss_dssp ESEEEEETTCEEEEEECCC-SCE-EEEEECSSH
T ss_pred eeEEEeCCCceEEEEEECC-CCE-EEEEEecCh
Confidence 9999999999999999999 467 888877643
No 23
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=100.00 E-value=2.4e-47 Score=395.19 Aligned_cols=263 Identities=14% Similarity=0.221 Sum_probs=220.1
Q ss_pred ccCccEEEEEEEEEEEECC-CCceEEEEEEcCcCCCceEEEecCCEEEEEEEeCCC--CCceeecCcccCCCCCCCCCCC
Q 012225 26 AEDDTIFYDFKVSYITASP-LGVPQQVIAINGKFPGAVLNATTNNNIVINVQNDLD--ESLLMTWPGIQMRRNSWQDGVQ 102 (468)
Q Consensus 26 a~~~~~~~~l~~~~~~~~~-dG~~~~~~~~Ng~~PgP~i~~~~Gd~v~v~v~N~l~--~~~siH~HG~~~~~~~~~DGv~ 102 (468)
+.+.+++|+|++++..+.. ||..+.+|+|||++|||+|++++||+|+|+|+|.++ .+++|||||+.+ +||++
T Consensus 24 ~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~~-----~dG~~ 98 (442)
T 2zoo_A 24 DHSAKVVINLETREQVGRIADGVEYVFWSFGETVPGSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVTG-----PGGGA 98 (442)
T ss_dssp SSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGGG
T ss_pred CCCcEEEEEEEEEEEEEEcCCCcEEEEEEECCcCCCCcEEEeCCCEEEEEEEECCCCCCCCCEEecCCcC-----CCCCC
Confidence 4557899999999999884 899999999999999999999999999999999986 599999999853 68876
Q ss_pred CCCCCcCCCCceEEEEEeCCCceeeEEeeC---ccccccCCeeecEEEecCCCCCCCCCCCCCcEEEEEeeeeecchHH-
Q 012225 103 GTNCPIPSQWNWTYQFQVKDQIGSFFYFPS---LNLQRVSGGFGPVIINNRKVIPIPFDQPEGDIIFLIGDWYTRNHTA- 178 (468)
Q Consensus 103 ~tq~~I~PG~~~~y~f~~~~~~Gt~wyH~H---~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~- 178 (468)
.+ .+|.||++++|+|++ +++|||||||| +..|+.+||+|+|||++++.. +.+|+|++|+++||+++....
T Consensus 99 ~~-~~i~pg~~~~y~f~~-~~~Gt~~yH~H~~~~~~~~~~Gl~G~~iv~~~~~~----~~~d~e~~l~l~d~~~~~~~~~ 172 (442)
T 2zoo_A 99 ES-SFTAPGHTSTFNFKA-LNPGLYIYHCATAPVGMHIANGMYGLILVEPKEGL----APVDREYYLVQGDFYTKGEFGE 172 (442)
T ss_dssp GG-CCBCTTCEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTCC----CCCSEEEEEEEEEECBSSCTTC
T ss_pred cc-EEECCCCEEEEEEEc-CCCeEEEEecCCCChHHHHhCccEEEEEEeCCCCC----CCCCceEEEEeeeeeccCcccc
Confidence 52 369999999999999 58999999996 468999999999999986532 245899999999999875310
Q ss_pred H------HHHhhcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceEEEEcCCCEEEEEEEEcCCCCeeeEEEeCCeeEEE
Q 012225 179 L------RTALDSGKDLDMPDGVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLV 252 (468)
Q Consensus 179 ~------~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~Vi 252 (468)
. ...+. ...++.++|||+.... ...+.+++++|++|||||+|+|....+.||++||.|+||
T Consensus 173 ~~~~~~~~~~~~----~~~~~~~liNG~~~~~---------~~~~~l~v~~G~~vrlrliN~~~~~~~~~~i~g~~~~vi 239 (442)
T 2zoo_A 173 AGLQPFDMAKAI----DEDADYVVFNGSVGST---------TDENSLTAKVGETVRLYIGNGGPNLVSSFHVIGEIFDTV 239 (442)
T ss_dssp CEEECBCHHHHH----TTCCSEEEETTSTTTT---------SGGGCEEEETTCEEEEEEEEEESSCCEEEEEETCCBSEE
T ss_pred cccccCChhHhc----cCCCCEEEECCCcCCC---------CCCCceEeCCCCEEEEEEEeCCCCCceeeEEcCCEEEEE
Confidence 0 00011 1467899999998621 012679999999999999999988889999999999999
Q ss_pred EeeCccccceeeceEEEcCCceEEEEEEecCCCCcceEEEEEecccccccccccceEEEEEEcCCC
Q 012225 253 ETEGHYTSQQNYTSFEIHVGQSYSFLVTMDQNASSDYYIVASARFVNESFWQRVTGVAILHYSNSK 318 (468)
Q Consensus 253 a~DG~~~~p~~~d~i~l~pGqR~dv~v~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~ 318 (468)
+.||.+++|..++++.|+||||+||++++++ +| +|+++.+...... .....++|+|.+..
T Consensus 240 ~~DG~~~~p~~~~~~~l~pg~r~~v~v~~~~-~G-~y~~~~~~~~~~~----~~g~~a~l~v~~~~ 299 (442)
T 2zoo_A 240 YVEGGSLKNHNVQTTLIPAGGAAIVEFKVEV-PG-TFILVDHSIFRAF----NKGALAMLKVEGPD 299 (442)
T ss_dssp EGGGSSCEECSBSEEEECTTEEEEEEEECCS-CE-EEEEEESSTHHHH----TTSCEEEEEEESCC
T ss_pred ecCCccCCCccceEEEECCCeeEEEEEEcCC-CC-eEEEEeccccccc----ccCceEEEEecCCC
Confidence 9999999999999999999999999999995 67 9999987654311 24578999998764
No 24
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=100.00 E-value=6.5e-46 Score=370.48 Aligned_cols=270 Identities=14% Similarity=0.141 Sum_probs=209.3
Q ss_pred ccccCccEEEEEEEEEEEECC-CCceEEEEEEcCcCCCceEEEecCCEEEEEEEeCCCCCceeecCcccCCCCCCCCCCC
Q 012225 24 CFAEDDTIFYDFKVSYITASP-LGVPQQVIAINGKFPGAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQ 102 (468)
Q Consensus 24 ~~a~~~~~~~~l~~~~~~~~~-dG~~~~~~~~Ng~~PgP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~ 102 (468)
+.+.+.+++|+|++++..+++ +|..+.+|+|||++|||+|++++||+|+|+|+|. .+++||||+++.+....||.+
T Consensus 26 ~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~---~~~~h~Hg~~~~~~~~~~~~~ 102 (333)
T 1mzy_A 26 AASGPVINEFEMRIIEKEVQLDEDAYLQAMTFDGSIPGPLMIVHEGDYVELTLINP---PENTMPHNIDFHAATGALGGG 102 (333)
T ss_dssp CSSSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEC---TTCCSCBCCEETTSCSGGGGG
T ss_pred cCCCCcEEEEEEEEEEEEEEcCCCcEEEEEEECCccCCCcEEecCCCEEEEEEEEC---CCCcccccceecCCCCCCCCC
Confidence 344557899999999999877 5999999999999999999999999999999999 578999999886554455555
Q ss_pred C-CCCCcCCCCceEEEEEeCCCceeeEEeeCcc-----ccccCCeeecEEEecCCCCC----CCCCCCCCcEEEEEeeee
Q 012225 103 G-TNCPIPSQWNWTYQFQVKDQIGSFFYFPSLN-----LQRVSGGFGPVIINNRKVIP----IPFDQPEGDIIFLIGDWY 172 (468)
Q Consensus 103 ~-tq~~I~PG~~~~y~f~~~~~~Gt~wyH~H~~-----~q~~~Gl~G~liV~~~~~~~----~~~~~~~~e~~l~l~d~~ 172 (468)
. + .|+||++++|+|++ +++||||||||.. .|+.+||+|+|||++++..+ .++ .+|+|++|+++||+
T Consensus 103 ~~~--~i~PG~~~~y~f~~-~~~Gt~~yH~h~~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~-~~d~e~~l~l~D~~ 178 (333)
T 1mzy_A 103 GLT--LINPGEKVVLRFKA-TRAGAFVYHCAPGGPMIPWHVVSGMAGCIMVLPRDGLKDHEGKPV-RYDTVYYIGESDHY 178 (333)
T ss_dssp GGC--CBCTTEEEEEEEEC-CSCEEEEEECCCSTTHHHHHHHTTCEEEEEEECTTCCBCTTSCBC-CCSEEEEEEEEEEC
T ss_pred cee--EeCCCCEEEEEEEC-CCCEEEEEeecCCcccchhhhhCCCEEEEEEccCcCccccccCCC-ccchheeeeeeeec
Confidence 4 5 49999999999999 5899999999986 69999999999999865321 122 55899999999999
Q ss_pred ecc--hHHH----------HHHhhcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceEEEEcCCCEEEEEEEEcCCCCee
Q 012225 173 TRN--HTAL----------RTALDSGKDLDMPDGVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSL 240 (468)
Q Consensus 173 ~~~--~~~~----------~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~ 240 (468)
+.. ...+ ...++.. ....++.++|||+.... ...+.+++++|++||||++|++....+
T Consensus 179 ~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ING~~~~~---------~~~~~l~v~~Ger~Rl~n~~~~~~~~~ 248 (333)
T 1mzy_A 179 IPKDEDGTYMRFSDPSEGYEDMVAVM-DTLIPSHIVFNGAVGAL---------TGEGALKAKVGDNVLFVHSQPNRDSRP 248 (333)
T ss_dssp CCBCTTSCBCCCSSHHHHHHHHHHHH-TTTCCSEEEETTSTTTT---------SGGGCEEEETTCEEEEEEEESSSCBCE
T ss_pred cCccccccccccccccccccchhHHh-hccCCcEEEECCccccc---------CCCcceEecCCCEEEEEECCCCCcccc
Confidence 832 1111 0000000 12457899999998521 013679999999998887776654322
Q ss_pred eEEEeCCeeEEEEeeCccccc-e-eeceEEEcCCceEEEEEEecCCCCcceEEEEEecccccccccccceEEEEEEcCCC
Q 012225 241 NFRIQNHNLLLVETEGHYTSQ-Q-NYTSFEIHVGQSYSFLVTMDQNASSDYYIVASARFVNESFWQRVTGVAILHYSNSK 318 (468)
Q Consensus 241 ~~~i~gh~~~Via~DG~~~~p-~-~~d~i~l~pGqR~dv~v~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~ 318 (468)
..+++|.++||+ ||.++++ . .++++.|+||||+||++++++ +| +|+++.+...... .....++++|.+..
T Consensus 249 -h~i~~h~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~~v~v~a~~-pG-~y~~~ch~~~h~~----~~Gm~~~~~v~~~~ 320 (333)
T 1mzy_A 249 -HLIGGHGDLVWE-TGKFHNAPERDLETWFIRGGTAGAALYKFLQ-PG-VYAYVNHNLIEAV----HKGATAHVLVEGEW 320 (333)
T ss_dssp -EEETCCEEEEET-TCCTTSCCEEEESBCCBCTTEEEEEEEECCS-CE-EEEEEESSHHHHH----TTCCEEEEEEESCC
T ss_pred -EEECCCCeEEEe-CCcccCCCccCcceEEECCCceEEEEEEcCC-CE-EEEEecChhhhHh----hCCCEEEEEEcCCC
Confidence 337899999999 9999874 3 489999999999999999996 57 9999987653220 14567899998643
No 25
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=100.00 E-value=3.4e-46 Score=362.38 Aligned_cols=240 Identities=14% Similarity=0.217 Sum_probs=198.6
Q ss_pred ccCccEEEEEEEEEEEECCCCceEEEEEEcCcCCCceEEEecCCEEEEEEEeCCCCCceeecCcccCCCCCCCCCCCCCC
Q 012225 26 AEDDTIFYDFKVSYITASPLGVPQQVIAINGKFPGAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQGTN 105 (468)
Q Consensus 26 a~~~~~~~~l~~~~~~~~~dG~~~~~~~~Ng~~PgP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq 105 (468)
+...+|+|+|++++. ..+.....++++||++|||+||+++||+|+|+|+|+++++++|||||+++. .++||++.+|
T Consensus 3 ~~g~~~~~~l~~~~~--~~~~~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~~~~~~siH~HG~~~~--~~~DG~~~t~ 78 (276)
T 3kw8_A 3 AGGEVRHLKMYAEKL--ADGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYE--ISSDGTAMNK 78 (276)
T ss_dssp -CCCEEEEEEEEEEC--TTSCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCC--GGGSCCTTTT
T ss_pred CcceEEEEEEEEEeC--CCCceecceeccCCcccCCeEEEECCCEEEEEEEECCCCCccEeecCcccC--CccCCCcCCc
Confidence 345689999999974 334444467789999999999999999999999999999999999999886 4699999899
Q ss_pred CCcCCCCceEEEEEeCC------------CceeeEEeeCcc------ccccCCeeecEEEecCCCCCCCCCCCCCcEEEE
Q 012225 106 CPIPSQWNWTYQFQVKD------------QIGSFFYFPSLN------LQRVSGGFGPVIINNRKVIPIPFDQPEGDIIFL 167 (468)
Q Consensus 106 ~~I~PG~~~~y~f~~~~------------~~Gt~wyH~H~~------~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~ 167 (468)
|+|+||++|+|+|++++ ++||||||||.. .|+.+||+|+|||++++.. ..|+|++++
T Consensus 79 ~~i~pG~~~~Y~f~~~~~~~~~~g~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~~-----~~drE~~l~ 153 (276)
T 3kw8_A 79 SDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV-----LPDATHTIV 153 (276)
T ss_dssp CSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC-----CCSEEEEEE
T ss_pred CCCCCCCEEEEEEEcCCccccccCccCCCCCEEEEEecCccccccchhhhhCccEEEEEEecCCCc-----ccccceEEE
Confidence 99999999999999953 379999999973 6899999999999997642 238999998
Q ss_pred EeeeeecchHHHHHHhhcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceEEEEcCCCEEEEEEEEcCCCCeeeEEEeCC
Q 012225 168 IGDWYTRNHTALRTALDSGKDLDMPDGVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNH 247 (468)
Q Consensus 168 l~d~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh 247 (468)
++|| +|||+.+. ..+.++++.|+++||||+|.+.. .+.||+|||
T Consensus 154 l~~~------------------------~iNG~~~~-----------~~p~i~v~~G~~vri~l~N~~~~-~Hp~HlHG~ 197 (276)
T 3kw8_A 154 FNDM------------------------TINNRKPH-----------TGPDFEATVGDRVEIVMITHGEY-YHTFHMHGH 197 (276)
T ss_dssp EETT------------------------EETTCCTT-----------CCCCEEEETTCEEEEEEEEESSC-CEEEEETTC
T ss_pred eccc------------------------ccceeccc-----------CCCCEEEecCCEEEEEEecCCCc-ceeEEEccc
Confidence 8653 89999862 24889999999999999999985 799999999
Q ss_pred eeEEEEeeCcccc----ceeeceEEEcCCceEEEEEEecC--CCCcceEEEEEecccccccccccceEEEEEEcCC
Q 012225 248 NLLLVETEGHYTS----QQNYTSFEIHVGQSYSFLVTMDQ--NASSDYYIVASARFVNESFWQRVTGVAILHYSNS 317 (468)
Q Consensus 248 ~~~Via~DG~~~~----p~~~d~i~l~pGqR~dv~v~~~~--~~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~ 317 (468)
.|.+++ ||.... +..+|++.|.|||++++++++++ .+| .|+++.+...... ....+.+.+...
T Consensus 198 ~f~v~~-~G~~~~p~~~~~~~Dtv~v~pg~~~~~~~~~~~~~npG-~w~~HCH~~~H~~-----~GM~g~~~V~~~ 266 (276)
T 3kw8_A 198 RWADNR-TGILTGPDDPSRVIDNKITGPADSFGFQIIAGEGVGAG-AWMYHCHVQSHSD-----MGMVGLFLVKKP 266 (276)
T ss_dssp CEESSS-SSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSE-EEEEEECSHHHHH-----TTCEEEEEEECT
T ss_pred eeEEec-cCccCCCcccccCCccEEeCCCceEEEEEEeccCCCCC-eEEEECCCchHhh-----CCCeEEEEEeCC
Confidence 999875 775432 35689999999999999999985 578 9999988653222 344566666543
No 26
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=100.00 E-value=4.3e-46 Score=372.28 Aligned_cols=266 Identities=15% Similarity=0.186 Sum_probs=204.6
Q ss_pred cCccEEEEEEEEEEEEC--CCCceEEEEEEcCcCCCceEEEecCCEEEEEEEeCCCCCceeecCcccCCCCCCCCCCCC-
Q 012225 27 EDDTIFYDFKVSYITAS--PLGVPQQVIAINGKFPGAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQG- 103 (468)
Q Consensus 27 ~~~~~~~~l~~~~~~~~--~dG~~~~~~~~Ng~~PgP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~- 103 (468)
.+.+++|+|++++..+. +||..+.+|+|||++|||+|++++||+|+|+|+|.+. ++||||+++.+..++||.+.
T Consensus 29 ~~~~~~~~l~~~~~~~~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~---~~~~h~~~~h~~~~~~~~~~~ 105 (336)
T 1oe1_A 29 GPKVVEFTMTIEEKKMVIDDKGTTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPAT---NAMPHNVDFHGATGALGGAKL 105 (336)
T ss_dssp CCCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCCEEEETTCEEEEEEEECTT---CCSCBCCEETTSCSGGGGGGG
T ss_pred CCcEEEEEEEEEEEEEEECCCCcEEEEEEECCccCCCeEEEcCCCEEEEEEEcCCC---CCccccceECCCCCCCCCcce
Confidence 45679999999998864 6699999999999999999999999999999999973 45666666655556677655
Q ss_pred CCCCcCCCCceEEEEEeCCCceeeEEeeCc----cccccCCeeecEEEecCCCCC----CCCCCCCCcEEEEEeeeeecc
Q 012225 104 TNCPIPSQWNWTYQFQVKDQIGSFFYFPSL----NLQRVSGGFGPVIINNRKVIP----IPFDQPEGDIIFLIGDWYTRN 175 (468)
Q Consensus 104 tq~~I~PG~~~~y~f~~~~~~Gt~wyH~H~----~~q~~~Gl~G~liV~~~~~~~----~~~~~~~~e~~l~l~d~~~~~ 175 (468)
++ |+||++++|+|++ +++||||||||. ..|+.+||+|+|||++++..+ .+. .+|+|++|+++||++..
T Consensus 106 ~~--i~pG~~~~y~f~~-~~~Gt~~yH~h~~~~~~~~~~~Gl~G~liV~~~~~~~~~~~~~~-~~D~e~~l~~~D~~~~~ 181 (336)
T 1oe1_A 106 TN--VNPGEQATLRFKA-DRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKPL-HYDRAYTIGEFDLYIPK 181 (336)
T ss_dssp CC--BCTTEEEEEEEEC-CSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTTCCBCTTSCBC-CCSEEEEEEEEEECCCB
T ss_pred EE--eCCCCEEEEEEEC-CCCeEEEEecCCCCchhHHHhCCCeEEEEEecCcCCcccccCcc-cCCceeEeeeeeeeecc
Confidence 54 9999999999999 589999999996 369999999999999865321 122 56899999999999852
Q ss_pred hH--HHH----------HHhhcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceEEEEcCCCEEEEEEEEcCCCCeeeEE
Q 012225 176 HT--ALR----------TALDSGKDLDMPDGVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFR 243 (468)
Q Consensus 176 ~~--~~~----------~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~ 243 (468)
+. ++. ..++. .....++.++|||+....| ..+.+++++|++||| +|++....+.++
T Consensus 182 ~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~liNG~~~~~~---------~~~~l~v~~GervRl--in~~~~~~~~~~ 249 (336)
T 1oe1_A 182 GPDGKYKDYATLAESYGDTVQV-MRTLTPSHIVFNGKVGALT---------GANALTAKVGETVLL--IHSQANRDTRPH 249 (336)
T ss_dssp CTTSSBCCCSSTGGGHHHHHHH-HHTTCCSEEEETTSTTTTS---------GGGCEEEETTCEEEE--EEEESSSCBCEE
T ss_pred ccCCceeecccccccccchhhH-hhcCCCCEEEECCeeccCC---------CCcceEcCCCCEEEE--EecCCCCccceE
Confidence 11 110 00000 0124678999999997442 127799999998765 566655555555
Q ss_pred -EeCCeeEEEEeeCccccce--eeceEEEcCCceEEEEEEecCCCCcceEEEEEecccccccccccceEEEEEEcCCC
Q 012225 244 -IQNHNLLLVETEGHYTSQQ--NYTSFEIHVGQSYSFLVTMDQNASSDYYIVASARFVNESFWQRVTGVAILHYSNSK 318 (468)
Q Consensus 244 -i~gh~~~Via~DG~~~~p~--~~d~i~l~pGqR~dv~v~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~ 318 (468)
+++|.++|++ ||.+++|. .++++.|++|||+||+|++++ +| +|+++.+...... .....|+++|.+..
T Consensus 250 ~i~gh~~~Vi~-DG~~~~p~~~~~dtv~i~pGer~dvlv~~~~-pG-~y~~~~h~~~~~~----~~G~~~~~~V~~~~ 320 (336)
T 1oe1_A 250 LIGGHGDWVWE-TGKFANPPQRDLETWFIRGGSAGAALYTFKQ-PG-VYAYLNHNLIEAF----ELGAAGHIKVEGKW 320 (336)
T ss_dssp ETTCCEEEEET-TCCTTSCCEEEESBCCBCTTEEEEEEEECCS-CE-EEEEEESSHHHHH----TTSCEEEEEEESCC
T ss_pred EECCcCceEeC-CCcCcCCccccceEEEECCCCcEEEEEEcCC-Cc-eEEEEechhhccc----cCCCeEEEEECCCC
Confidence 5999999997 99998864 368999999999999999996 68 9999987643210 14567899998654
No 27
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=100.00 E-value=1.7e-45 Score=361.05 Aligned_cols=242 Identities=14% Similarity=0.203 Sum_probs=194.1
Q ss_pred ccccCccEEEEEEEEEEEECCCCc-eEEEEEEcCcCCCceEEEecCCEEEEEEEeCCCCCceeecCcccCCCCCCCCCCC
Q 012225 24 CFAEDDTIFYDFKVSYITASPLGV-PQQVIAINGKFPGAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQ 102 (468)
Q Consensus 24 ~~a~~~~~~~~l~~~~~~~~~dG~-~~~~~~~Ng~~PgP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~ 102 (468)
..+.+.+|+++|.+++.. +|. ...++..||++|||+||+++||+|+|+|+|++++++||||||+++. +++||++
T Consensus 23 ~~~~~~~~~~~~~a~~~~---~~~~~~~~~~~~gt~PGP~i~~~~GD~v~v~~~N~l~~~~siH~HG~~~~--~~~DG~~ 97 (299)
T 3t9w_A 23 VRAQGTTRRITMYAEKIS---DELYGYGLAPGGATVPGPVLEMWEGDTLEIDLVNTTDRVLSLHPHGVDYD--VNSDGTL 97 (299)
T ss_dssp ----CCEEEEEEEEEEEE---TTEEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCC--GGGSCCT
T ss_pred cccCCCEEEEEEEEEecC---CCceeeeecCCCCCccCceEEEECCeEEEEEEEECCCCCccEEeCCcccC--CccCCCc
Confidence 345667899999888755 332 2345566999999999999999999999999999999999999774 6799998
Q ss_pred CCCCCcCCCCceEEEEEeC------------CCceeeEEeeCcc------ccccCCeeecEEEecCCCCCCCCCCCCCcE
Q 012225 103 GTNCPIPSQWNWTYQFQVK------------DQIGSFFYFPSLN------LQRVSGGFGPVIINNRKVIPIPFDQPEGDI 164 (468)
Q Consensus 103 ~tq~~I~PG~~~~y~f~~~------------~~~Gt~wyH~H~~------~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~ 164 (468)
.+||+|+||++|+|+|+++ +++||||||||.. .|+.+||+|+|||+++.. . .+|+|+
T Consensus 98 ~~~~~i~PG~t~~Y~~~~~~~~~~~~~~~~~~~~gt~~YH~H~~~~~~~~~~~~~GL~G~liV~~~~~--~---~~d~e~ 172 (299)
T 3t9w_A 98 MNGSAVMPGQTRRYTWRSHVGYRRADGSWAEGTAGYWHYHDHAMGTEHGTEGVLKGLYGALVVRRQGD--L---LPKRQF 172 (299)
T ss_dssp TTTCCBCTTCEEEEEEBCCCCEECTTSCEECCCCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC--C---CCSEEE
T ss_pred cccCccCCCCeEEEEEEeecccccCCCcCCCCCceeEEEecCCcccccchhhhcccccceEEEecccc--c---Cccccc
Confidence 8999999999999999985 2589999999963 367889999999998764 2 348999
Q ss_pred EEEEeeeeecchHHHHHHhhcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceEEEEcCCCEEEEEEEEcCCCCeeeEEE
Q 012225 165 IFLIGDWYTRNHTALRTALDSGKDLDMPDGVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRI 244 (468)
Q Consensus 165 ~l~l~d~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i 244 (468)
++++++| .+||+... ..+.++++.|+++||||+|++.. .+.||+
T Consensus 173 ~l~~~~~------------------------~~Ng~~~~-----------~~p~l~v~~Ge~Vr~~liN~~~~-~HpfHl 216 (299)
T 3t9w_A 173 TVVFNDM------------------------MINNRAHH-----------DAPTFEANLGERVEWIAIGHGSN-FHTFHL 216 (299)
T ss_dssp EEEEETT------------------------EETTCCTT-----------CCCEEEEETTCEEEEEEEEESSC-CCEEEE
T ss_pred eeeeeee------------------------eecCcccc-----------ccccceecCCCEEEEEEEecccc-ceeeeE
Confidence 9998765 37777752 24789999999999999999986 599999
Q ss_pred eCCeeEEEEeeCcccc---ceeeceEEEcCCceEEEEEEecC--CCCcceEEEEEecccccccccccceEEEEEEcCC
Q 012225 245 QNHNLLLVETEGHYTS---QQNYTSFEIHVGQSYSFLVTMDQ--NASSDYYIVASARFVNESFWQRVTGVAILHYSNS 317 (468)
Q Consensus 245 ~gh~~~Via~DG~~~~---p~~~d~i~l~pGqR~dv~v~~~~--~~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~ 317 (468)
+||.|+|+..|+.... +..+|++.|.||||+++++.+.+ .+| .|.+..+...-.. ....+++.....
T Consensus 217 HGh~F~v~~~g~~~~~~~~~~~~Dtv~v~PGe~~~~~via~~~dnPG-~w~~HCHi~~H~~-----~GM~~~f~V~~~ 288 (299)
T 3t9w_A 217 HGHRWLDNRTGMRTSEYDPSPLIDIKDLNPGVSFGFQVIAGEGVGPG-MWMYHCHVQNHSD-----MGMAGMFLVRNA 288 (299)
T ss_dssp TTCCEESSSSSSCCSTTCCCCEESEEECCTTCEEEEEEETTTTTCSE-EEEEEECSHHHHH-----TTCEEEEEEECT
T ss_pred ecceEEEEecccccCCcCCCCceeeEEeCCceeEEEEEEEeeCCCCe-eEEEEcCCHHHHh-----cCCeEEEEEECC
Confidence 9999999998887654 34689999999999999997654 367 8888887653222 334556666543
No 28
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=100.00 E-value=1.5e-45 Score=363.98 Aligned_cols=242 Identities=14% Similarity=0.186 Sum_probs=196.7
Q ss_pred ccccCccEEEEEEEEEEEECCCCceE-EEEEEcCcCCCceEEEecCCEEEEEEEeCCCCCceeecCcccCCCCCCCCCCC
Q 012225 24 CFAEDDTIFYDFKVSYITASPLGVPQ-QVIAINGKFPGAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQ 102 (468)
Q Consensus 24 ~~a~~~~~~~~l~~~~~~~~~dG~~~-~~~~~Ng~~PgP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~ 102 (468)
+.+.+.+|+++|.+. ..++|... .++..||++|||+||+++||+|+|+|+|++++++||||||+++. +.+||++
T Consensus 7 ~p~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~t~PGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~--~~~dG~~ 81 (313)
T 3tas_A 7 APAGGEVKRIKLYAE---RLGGGQMGYGLEKGKATIPGPLIELNEGDTLHIEFENTMDVPVSLHVHGLDYE--ISSDGTK 81 (313)
T ss_dssp CCCCCCEEEEEEEEE---ECGGGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCC--GGGSCST
T ss_pred CCCCceEEEEEEEEE---EcCCCceeeeeecCCccccCCeEEEECCCEEEEEEEECCCCCccEeecCCcCC--ccCCCCc
Confidence 344556788888764 34666554 45677999999999999999999999999999999999999875 6799999
Q ss_pred CCCCCcCCCCceEEEEEeC------------CCceeeEEeeCccc------cccCCeeecEEEecCCCCCCCCCCCCCcE
Q 012225 103 GTNCPIPSQWNWTYQFQVK------------DQIGSFFYFPSLNL------QRVSGGFGPVIINNRKVIPIPFDQPEGDI 164 (468)
Q Consensus 103 ~tq~~I~PG~~~~y~f~~~------------~~~Gt~wyH~H~~~------q~~~Gl~G~liV~~~~~~~~~~~~~~~e~ 164 (468)
.+||+|+||++|+|+|++. +++||||||||... |+.+||+|+|||+++.. . .+|+|+
T Consensus 82 ~~~~~i~PG~~~~Y~~~~~~P~~~~~~~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~--~---~~d~e~ 156 (313)
T 3tas_A 82 QSRSDVEPGGTRTYTWRTHVPGRRADGTWRAGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGD--V---LPDRTH 156 (313)
T ss_dssp TTTCCBCTTCEEEEEEBCCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC--B---CCSEEE
T ss_pred cccCCcCCCCEEEEEEEeccCCccccccccCCCceEEEEeecCcccccchhhhhccccCceEeecccc--c---cccccc
Confidence 8999999999999999863 35799999999643 47799999999999764 2 348999
Q ss_pred EEEEeeeeecchHHHHHHhhcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceEEEEcCCCEEEEEEEEcCCCCeeeEEE
Q 012225 165 IFLIGDWYTRNHTALRTALDSGKDLDMPDGVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRI 244 (468)
Q Consensus 165 ~l~l~d~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i 244 (468)
+|+++|| ++||+... ..+.+.++.|++|||||+|++.. .+.||+
T Consensus 157 ~l~~~d~------------------------t~Ng~~~~-----------~~~~l~v~~Ge~vr~~liN~g~~-~hpfHl 200 (313)
T 3tas_A 157 TIVFNDM------------------------TINNRPAH-----------TGPDFEATVGDRVEFVMITHGEY-YHTFHL 200 (313)
T ss_dssp EEEEETT------------------------EETTCCTT-----------CCCCEEEETTCEEEEEEEEESSC-CEEEEE
T ss_pred eeeccch------------------------hcccCCcc-----------cccccccccCCEEEEEEeccccc-ceeeee
Confidence 9999887 35666642 23679999999999999999965 799999
Q ss_pred eCCeeEEEEeeCcccc---ceeeceEEEcCCceEEEEEEecC--CCCcceEEEEEecccccccccccceEEEEEEcCC
Q 012225 245 QNHNLLLVETEGHYTS---QQNYTSFEIHVGQSYSFLVTMDQ--NASSDYYIVASARFVNESFWQRVTGVAILHYSNS 317 (468)
Q Consensus 245 ~gh~~~Via~DG~~~~---p~~~d~i~l~pGqR~dv~v~~~~--~~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~ 317 (468)
+||.|+|++.||.... +..+|++.|.||||++++|.+.+ .+| .|.+..+...-.. ....+++.++..
T Consensus 201 HGh~F~v~~~~~~~~~~~~~~~~Dtv~l~Pger~~v~v~a~~~~nPG-~w~~HCHi~~H~~-----~GM~~~f~V~~~ 272 (313)
T 3tas_A 201 HGHRWADNRTGMLTGPDDPSQVIDNKICGPADSFGFQVIAGEGVGAG-AWMYHCHVQSHSD-----MGMVGLFLVKKP 272 (313)
T ss_dssp TTCCEESSTTSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSE-EEEEEECSHHHHH-----TTCEEEEEEECT
T ss_pred cCCeeEEEEECCccCCCCCCeeeeEEEeCCCcceEEEEEeccCCCCE-eEEEEeCChHHHH-----CCCeEEEEEECC
Confidence 9999999999987653 66789999999999999998764 367 8888887543222 344566666543
No 29
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=100.00 E-value=1.7e-45 Score=368.59 Aligned_cols=269 Identities=14% Similarity=0.154 Sum_probs=205.7
Q ss_pred cccCccEEEEEEEEEEEEC--CCCceEEEEEEcCcCCCceEEEecCCEEEEEEEeCCCCCceeecCcccCCCCCCCCCCC
Q 012225 25 FAEDDTIFYDFKVSYITAS--PLGVPQQVIAINGKFPGAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQ 102 (468)
Q Consensus 25 ~a~~~~~~~~l~~~~~~~~--~dG~~~~~~~~Ng~~PgP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~ 102 (468)
.+.+.+++|+|++++..++ +||..+.+|+|||++|||+|++++||+|+|+|+|.+ +++||||+++.+....||..
T Consensus 33 ~~~~~~~~~~l~~~~~~~~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~---~~~~~hg~~~~~~~~~~~~~ 109 (340)
T 2bw4_A 33 KTGPRVVEFTMTIEEKKLVIDREGTEIHAMTFNGSVPGPLMVVHENDYVELRLINPD---TNTLLHNIDFHAATGALGGG 109 (340)
T ss_dssp SSSCCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCEEEEETTCEEEEEEEECT---TCCSCBCCEETTSCSGGGGG
T ss_pred cCCCcEEEEEEEEEEEEEEECCCCcEEEEEEECCCCCCCcEEEcCCCEEEEEEEeCC---CCCccCcceeCCcCCCCCCc
Confidence 4456789999999999876 559999999999999999999999999999999998 77999999876544444433
Q ss_pred C-CCCCcCCCCceEEEEEeCCCceeeEEeeCcc----ccccCCeeecEEEecCCCCC----CCCCCCCCcEEEEEeeeee
Q 012225 103 G-TNCPIPSQWNWTYQFQVKDQIGSFFYFPSLN----LQRVSGGFGPVIINNRKVIP----IPFDQPEGDIIFLIGDWYT 173 (468)
Q Consensus 103 ~-tq~~I~PG~~~~y~f~~~~~~Gt~wyH~H~~----~q~~~Gl~G~liV~~~~~~~----~~~~~~~~e~~l~l~d~~~ 173 (468)
. ++ |.||++++|+|+++ ++||||||||.. .|+.+||+|+|||++++..+ .+. .+|+|++++++||++
T Consensus 110 ~~~~--i~PG~~~~y~~~~~-~~Gt~wyH~h~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~-~~d~e~~l~l~D~~~ 185 (340)
T 2bw4_A 110 ALTQ--VNPGEETTLRFKAT-KPGVFVYHCAPEGMVPWHVTSGMNGAIMVLPRDGLKDEKGQPL-TYDKIYYVGEQDFYV 185 (340)
T ss_dssp GGCC--BCTTEEEEEEEECC-SCEEEEEECCCTTCHHHHHHTTCEEEEEEECTBCEECTTSCEE-CCSEEEEEEEEEECC
T ss_pred cceE--eCCCCEEEEEEECC-CCeEEEEEcCCCCchhhHHhCcCEEEEEEccCcCcccccCCCc-CcceeEEEeeeeeee
Confidence 3 53 99999999999995 799999999964 69999999999999865311 122 458999999999998
Q ss_pred c--chHHH----------HHHhhcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceEEEEcCCCEEEEEEEEcCCCCeee
Q 012225 174 R--NHTAL----------RTALDSGKDLDMPDGVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLN 241 (468)
Q Consensus 174 ~--~~~~~----------~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~ 241 (468)
. ....+ ...++. .....++.++|||+.+.. ...+.+++++|+++||+++|.+.. .+.
T Consensus 186 ~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~iNG~~~~~---------~~~~~l~v~~G~r~Rl~n~~~~~~-~~~ 254 (340)
T 2bw4_A 186 PKDEAGNYKKYETPGEAYEDAVKA-MRTLTPTHIVFNGAVGAL---------TGDHALTAAVGERVLVVHSQANRD-TRP 254 (340)
T ss_dssp CBCTTSCBCCCCSHHHHHHHHHHH-HHTTCCSEEEETTSTTTT---------SGGGCEEEETTCEEEEEEEESSSC-BCE
T ss_pred ccccCCcccccccccccccchhhH-hhcCCCCEEEECCccCCc---------cCCCceEcCCCCEEEEEECCCCCc-cce
Confidence 3 21111 000100 001357899999998621 113789999999888777766544 233
Q ss_pred EEEeCCeeEEEEeeCccccc-e-eeceEEEcCCceEEEEEEecCCCCcceEEEEEecccccccccccceEEEEEEcCCC
Q 012225 242 FRIQNHNLLLVETEGHYTSQ-Q-NYTSFEIHVGQSYSFLVTMDQNASSDYYIVASARFVNESFWQRVTGVAILHYSNSK 318 (468)
Q Consensus 242 ~~i~gh~~~Via~DG~~~~p-~-~~d~i~l~pGqR~dv~v~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~ 318 (468)
.++++|.|+|++ ||.++.+ . .++++.|+||||+||+|++++ +| +|+++.+...... .....++++|.+..
T Consensus 255 ~~i~gh~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~~v~v~~~~-pG-~y~~~~h~~~~h~----~~Gm~~~~~V~~~~ 326 (340)
T 2bw4_A 255 HLIGGHGDYVWA-TGKFRNPPDLDQETWLIPGGTAGAAFYTFRQ-PG-VYAYVNHNLIEAF----ELGAAGHFKVTGEW 326 (340)
T ss_dssp EEETCCEEEEET-TCCTTSCCEEEESCCCBCTTEEEEEEEECCS-CE-EEEEEESSHHHHH----TTSCEEEEEEESCC
T ss_pred EEecCcceEEeC-CCcccCCccccceEEEeCCCceEEEEEECCC-Ce-eeEEEcCchHHHH----hCCCEEEEEECCCC
Confidence 458999999997 9998864 3 479999999999999999997 68 9999987652111 13456889998654
No 30
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=100.00 E-value=4.6e-42 Score=342.81 Aligned_cols=236 Identities=14% Similarity=0.222 Sum_probs=192.0
Q ss_pred ccEEEEEEEEEEEECCCCceEE-EEEEcCcCCCceEEEecCCEEEEEEEeCCCCCceeecCcccCCCCCCCCCCCCCCCC
Q 012225 29 DTIFYDFKVSYITASPLGVPQQ-VIAINGKFPGAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQGTNCP 107 (468)
Q Consensus 29 ~~~~~~l~~~~~~~~~dG~~~~-~~~~Ng~~PgP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~ 107 (468)
.+++|+|++++. ++|.... .+.+||++|||+|++++||+|+|+|+|.++++++|||||+.+. +++||++.+||+
T Consensus 47 ~~~~~~l~~~~~---~~~~~~~~~~~~ng~~pGP~I~v~~Gd~v~v~~~N~l~~~~sih~HG~~~~--~~~DG~~~t~~~ 121 (343)
T 3cg8_A 47 EVRHLKMYAEKL---ADGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYE--ISSDGTAMNKSD 121 (343)
T ss_dssp CEEEEEEEEEEC---GGGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCC--GGGSCCTTTTCS
T ss_pred eEEEEEEEEEEc---cCCeeeeeeecCCCCccCCEEEEECCCEEEEEEEECCCCCeeEEecCcccC--CcCCCccccccc
Confidence 568999998864 4564332 2235899999999999999999999999999999999999876 689999988999
Q ss_pred cCCCCceEEEEEeCC------------CceeeEEeeCc------cccccCCeeecEEEecCCCCCCCCCCCCCcEEEEEe
Q 012225 108 IPSQWNWTYQFQVKD------------QIGSFFYFPSL------NLQRVSGGFGPVIINNRKVIPIPFDQPEGDIIFLIG 169 (468)
Q Consensus 108 I~PG~~~~y~f~~~~------------~~Gt~wyH~H~------~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~ 169 (468)
|+||++++|+|++.+ ++|+||||||. ..|+.+||+|+|||+++... .+|+|++++++
T Consensus 122 I~PG~~~~y~f~~~~pg~~~~g~~~~~~~Gt~~YH~h~~~~~~~~~~~~~Gl~G~~iV~~~~~~-----~pd~e~~l~~~ 196 (343)
T 3cg8_A 122 VEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV-----LPDATHTIVFN 196 (343)
T ss_dssp BCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC-----CCSEEEEEEEE
T ss_pred ccCCCEEEEEEEeCCCCcccccccCCCCceEEEEecCccccccchhhhhcCCeEEEEEecCCCC-----CCCceEEEEcc
Confidence 999999999999842 35999999996 36899999999999987542 24789999887
Q ss_pred eeeecchHHHHHHhhcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceEEEEcCCCEEEEEEEEcCCCCeeeEEEeCCee
Q 012225 170 DWYTRNHTALRTALDSGKDLDMPDGVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNL 249 (468)
Q Consensus 170 d~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~ 249 (468)
|| +|||+... ..+.++++.|++|||||+|.+.. .|.||+|||.|
T Consensus 197 d~------------------------~iNG~~~~-----------~~~~l~v~~Ge~vri~l~N~g~~-~HpfHlHGh~f 240 (343)
T 3cg8_A 197 DM------------------------TINNRKPH-----------TGPDFEATVGDRVEIVMITHGEY-YHTFHMHGHRW 240 (343)
T ss_dssp TT------------------------EETTCCTT-----------CCCCEEEETTCEEEEEEEEESSC-CEEEEETTCCE
T ss_pred cc------------------------eecccCCC-----------CCccEEeCCCCEEEEEEEcCCcc-ccccEecCcEE
Confidence 64 79998852 23789999999999999999975 79999999999
Q ss_pred EEEEeeCcccc----ceeeceEEEcCCceEEEEEEec--CCCCcceEEEEEecccccccccccceEEEEEEcCC
Q 012225 250 LLVETEGHYTS----QQNYTSFEIHVGQSYSFLVTMD--QNASSDYYIVASARFVNESFWQRVTGVAILHYSNS 317 (468)
Q Consensus 250 ~Via~DG~~~~----p~~~d~i~l~pGqR~dv~v~~~--~~~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~ 317 (468)
+|+ .||.+.. +...|++.|.|||+++++++++ +.+| .|+++.+...... ....+++.+...
T Consensus 241 ~v~-~~G~~~~p~~~~~~~Dtv~v~PG~~~~v~~~~~~~~~pG-~w~~HCHi~~H~~-----~GM~g~~~V~~~ 307 (343)
T 3cg8_A 241 ADN-RTGILTGPDDPSRVIDNKITGPADSFGFQIIAGEGVGAG-AWMYHCHVQSHSD-----MGMVGLFLVKKP 307 (343)
T ss_dssp ESS-SSSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSE-EEEEEECSHHHHH-----TTCEEEEEEECT
T ss_pred EEe-ccCcccCCCCcccceeeEEeCCCCEEEEEEEECCCCCCe-eEEEeCCCHHHHh-----ccCcEEEEEecC
Confidence 997 4676543 3457999999999999999974 3567 8888887543221 345667777643
No 31
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=100.00 E-value=8.3e-42 Score=369.16 Aligned_cols=248 Identities=15% Similarity=0.205 Sum_probs=184.0
Q ss_pred cCccEEEEEEEEEEEECCC--C------------ceEEE--EEE----------------cCcCCCceEEEecCCEEEEE
Q 012225 27 EDDTIFYDFKVSYITASPL--G------------VPQQV--IAI----------------NGKFPGAVLNATTNNNIVIN 74 (468)
Q Consensus 27 ~~~~~~~~l~~~~~~~~~d--G------------~~~~~--~~~----------------Ng~~PgP~i~~~~Gd~v~v~ 74 (468)
...+|+|.+-+.+..+... | +.+++ ..| |+++|||+|||++||+|+|+
T Consensus 3 ~~~~r~y~i~a~e~~w~y~~~~~~~~~~~~~~~~~y~k~v~~~ytd~~f~~~~~~~~~~~~~~~pGP~I~~~~Gd~v~v~ 82 (647)
T 1sdd_B 3 TGNRKYYYIAAEEISWDYSKFVQSDDVDYVPEDTVYKKVVFRKYLDSTFTKLDPQGEYEEHLGILGPVIRAEVDDVIQVR 82 (647)
T ss_dssp CCCEEEEEEEEEEEEEETTTTC--------CCCCEEEEEEEEEESSTTCCSBCCCCSTTGGGTTSCCCEEEETTCEEEEE
T ss_pred CCCeEEEEEEEEEEEEeCCCCCcccccCccccCCeEeEEEEEEecCCcccccccCCCcccccCCcCceEEEeCCCEEEEE
Confidence 4568999999999876332 2 22232 223 34789999999999999999
Q ss_pred EEeCCCCCceeecCcccCCCCCCCCCCCC-C--------CCCcCCCCceEEEEEeCCC-----ce----eeEEeeCc--c
Q 012225 75 VQNDLDESLLMTWPGIQMRRNSWQDGVQG-T--------NCPIPSQWNWTYQFQVKDQ-----IG----SFFYFPSL--N 134 (468)
Q Consensus 75 v~N~l~~~~siH~HG~~~~~~~~~DGv~~-t--------q~~I~PG~~~~y~f~~~~~-----~G----t~wyH~H~--~ 134 (468)
|+|.++++++|||||+++. +++||+|+ + ||+|+||++|+|+|+++++ +| |||||||. .
T Consensus 83 ~~N~l~~~~siH~HGl~~~--~~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~~~G~~c~T~wYHsH~~~~ 160 (647)
T 1sdd_B 83 FKNLASRPYSLHAHGLSYE--KSSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPENPGSACRAWAYYSAVNPE 160 (647)
T ss_dssp ECCCSSSCBCCEEETCC-----------------------CCBCTTCCEECCEECCTTTSCCSSSCSEEEEEEECCSSHH
T ss_pred EEECCCCceEEecCcceeC--CCCCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCCCCCCCceEEEEccCCCCc
Confidence 9999999999999999875 67999996 6 8999999999999999753 57 99999998 4
Q ss_pred ccccCCeeecEEEecCCCCCC--CCCCCCCcEEEEEe------eeeecchHHHH-HHhhcCCCCCCCceEEEcCcCCCCC
Q 012225 135 LQRVSGGFGPVIINNRKVIPI--PFDQPEGDIIFLIG------DWYTRNHTALR-TALDSGKDLDMPDGVLINGKGPYRY 205 (468)
Q Consensus 135 ~q~~~Gl~G~liV~~~~~~~~--~~~~~~~e~~l~l~------d~~~~~~~~~~-~~~~~g~~~~~~~~~liNG~~~~~~ 205 (468)
.|+.+||+|+|||++++.... ..+..++|++|+|+ ||+++...... ...+. .....++.++|||+...
T Consensus 161 ~q~~~GL~G~lIV~~~~~~~~~~~~~~~~~e~~l~l~~~d~~~~w~~~~~~~~~~~~~~~-~~~~~~~~~~iNG~~~~-- 237 (647)
T 1sdd_B 161 KDIHSGLIGPLLICRKGTLDKETNMPVDMREFVLLFMVFDEKKSWYYDKKPTRSWRRASS-EVKNSHEFHAINGMIYN-- 237 (647)
T ss_dssp HHHTTTCEEEEEEECTTSSCTTSCCCSSCCEEEEEEEEEEGGGSSCCC----------------CCCEEEEETTBSSC--
T ss_pred ccccccCccCEEEeeCCCcccccCCCCcceeEEEEEEeecCccccccccCcccccccCCc-chhhcCceeccCCEecC--
Confidence 789999999999999764211 11234689999999 67665432210 00110 11234689999999851
Q ss_pred CCccCCCCCcceEEEEcCCCEEEEEEEEcCCCC-eeeEEEeCCeeEEEEeeCccccceeeceEEEcCCceEEEEEEecCC
Q 012225 206 NTTLVPDGIEYETINVDPGKTYRVRVHNVGTST-SLNFRIQNHNLLLVETEGHYTSQQNYTSFEIHVGQSYSFLVTMDQN 284 (468)
Q Consensus 206 ~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~-~~~~~i~gh~~~Via~DG~~~~p~~~d~i~l~pGqR~dv~v~~~~~ 284 (468)
.+.+++++|++|||||+|++... .|.||+|||.|+||+.||. .+|++.|+||||+||+|++++
T Consensus 238 ----------~p~l~v~~G~~vrlrliN~~~~~~~h~~hlhG~~f~vi~~d~~-----~~d~v~l~pg~r~~v~~~~~~- 301 (647)
T 1sdd_B 238 ----------LPGLRMYEQEWVRLHLLNLGGSRDIHVVHFHGQTLLENGTQQH-----QLGVWPLLPGSFKTLEMKASK- 301 (647)
T ss_dssp ----------CCCCEEETTCEEEEEEEECCCTTCCEEEEETTCCEEECSSSCE-----EESSEEECTTEEEEEEEECCS-
T ss_pred ----------CCCeEEcCCCEEEEEEEeCCCCCcceeEEEcCcEEEEecCCCc-----ccceEEECCCeEEEEEEEecc-
Confidence 37899999999999999999864 8999999999999998864 579999999999999999996
Q ss_pred CCcceEEEEEec
Q 012225 285 ASSDYYIVASAR 296 (468)
Q Consensus 285 ~g~~y~i~~~~~ 296 (468)
+| .|.++.+..
T Consensus 302 pG-~w~~hch~~ 312 (647)
T 1sdd_B 302 PG-WWLLDTEVG 312 (647)
T ss_dssp SE-EEEEECCCH
T ss_pred ce-EeecccCcc
Confidence 57 888887754
No 32
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=100.00 E-value=1.3e-40 Score=345.37 Aligned_cols=257 Identities=17% Similarity=0.216 Sum_probs=210.8
Q ss_pred ccEEEEEEEEEEEECC-CCceEEEEEEcCcCCCceEEEecCCEEEEEEEeCCC--CCceeecCcccCCCCCCCCCCCC-C
Q 012225 29 DTIFYDFKVSYITASP-LGVPQQVIAINGKFPGAVLNATTNNNIVINVQNDLD--ESLLMTWPGIQMRRNSWQDGVQG-T 104 (468)
Q Consensus 29 ~~~~~~l~~~~~~~~~-dG~~~~~~~~Ng~~PgP~i~~~~Gd~v~v~v~N~l~--~~~siH~HG~~~~~~~~~DGv~~-t 104 (468)
.+++++|++++....+ +|....+|+|||++|||+|++++||+++|+|+|.++ ..++|||||+. .+||++. +
T Consensus 162 ~~~~~~l~~~~~~~~~~~g~~~~~~~~NG~~pgp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~~-----~~DG~~~~~ 236 (447)
T 2dv6_A 162 KTVRIDLETVEVKGQLDDNTTYTYWTFNGKVPGPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGAT-----GPGGAAAFT 236 (447)
T ss_dssp CEEEEEEEEEEEEEEEETTEEEEEEEETTBBSCCCEEEETTCEEEEEEEECTTCSSCBCCEETTCC-----SGGGGGGGC
T ss_pred cEEEEEEEEEEEEEeccCCceeEEEEECCccCCCeEEecCCCEEEEEEEeCCCCceeEEEeecccc-----CCCCCCccE
Confidence 4568888887766666 688889999999999999999999999999999985 57999999984 3799875 4
Q ss_pred CCCcCCCCceEEEEEeCCCceeeEEeeCcc---ccccCCeeecEEEecCCCCCCCCCCCCCcEEEEEeeeeecchH----
Q 012225 105 NCPIPSQWNWTYQFQVKDQIGSFFYFPSLN---LQRVSGGFGPVIINNRKVIPIPFDQPEGDIIFLIGDWYTRNHT---- 177 (468)
Q Consensus 105 q~~I~PG~~~~y~f~~~~~~Gt~wyH~H~~---~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~---- 177 (468)
+ |.||++++|.|++ +++|+||||||.. .|+.+||+|+|+|+++... +.+|+|++++++||++....
T Consensus 237 ~--i~pG~~~~~~~~~-~~~G~~~yh~h~~~~~~~~~~Gl~g~l~v~~~~~~----P~~d~~~~~~~~~~~~~~~~~~~g 309 (447)
T 2dv6_A 237 Q--TDPGEETVVTFKA-LIPGIYVYHCATPSVPTHITNGMYGLLLVEPEGGL----PQVDREFYVMQGEIYTVKSFGTSG 309 (447)
T ss_dssp C--BCTTCEEEEEEEC-CSCEEEEEECCSSSHHHHHHTTCEEEEEEECTTCS----CCCSEEEEEEEEEECBSSCTTCCE
T ss_pred E--eCCCCEEEEEEEC-CCCeEEEEEeCCCChHHHHhCCCEEEEEEeCCCCC----CCCCeeEEEEecccccCCcccccc
Confidence 3 9999999999999 5799999999963 6888999999999986532 24588999999999875321
Q ss_pred ----HHHHHhhcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceEEEEcCCCEEEEEEEEcCCCCeeeEEEeCCeeEEEE
Q 012225 178 ----ALRTALDSGKDLDMPDGVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVE 253 (468)
Q Consensus 178 ----~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~Via 253 (468)
.+.... + ..++.++|||+.+..+ ....+++++|++|||||+|++....|.||++||.|+||+
T Consensus 310 ~~~~~~~~~~--~---~~~~~~~iNG~~~~~~---------~~~~~~v~~g~~vrlrliN~~~~~~h~~hlhGh~f~vv~ 375 (447)
T 2dv6_A 310 EQEMDYEKLI--N---EKPEYFLFNGSVGSLT---------RSHPLYASVGETVRIFFGVGGPNFTSSFHVIGEIFDHVY 375 (447)
T ss_dssp ECCBBHHHHH--T---TCCSEEEETTSTTCCC---------CCCCEEECTTCEEEEEEEEEESSCCEEEEEETCCEEEEC
T ss_pred cccCChHHhh--c---cCCCEEEECCcccCCC---------CCcceEECCCCEEEEEEEeCCCCceEeEEEcCcEEEEEE
Confidence 011111 1 2467899999997432 125799999999999999999877899999999999999
Q ss_pred eeCccccce--eeceEEEcCCceEEEEEEecCCCCcceEEEEEecccccccccccceEEEEEEcCCC
Q 012225 254 TEGHYTSQQ--NYTSFEIHVGQSYSFLVTMDQNASSDYYIVASARFVNESFWQRVTGVAILHYSNSK 318 (468)
Q Consensus 254 ~DG~~~~p~--~~d~i~l~pGqR~dv~v~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~ 318 (468)
.||.++++. ..|++.|.||||++|++++++ +| .|+|+.+...... ....++++|.+..
T Consensus 376 ~dG~~~~~p~~~~dtv~l~pg~r~~i~~~~~~-pG-~~~~hch~~~h~~-----~Gm~~~~~v~~~~ 435 (447)
T 2dv6_A 376 SLGSVVSPPLIGVQTVSVPPGGATIVDFKIDR-AG-RYILVDHALSRLE-----HGLVGFLNVDGPK 435 (447)
T ss_dssp GGGCSSSCCEEEESEEEECTTEEEEEEEECCS-CE-EEEEEESSGGGGG-----GTCCEEEEECSCS
T ss_pred cCCcccCCCcccccEEEECCCcEEEEEEECCC-CE-EEEEEecCcCccc-----cCCEEEEEEeCCC
Confidence 999998754 489999999999999999996 68 8999998665422 4457899998653
No 33
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=100.00 E-value=2.6e-43 Score=347.18 Aligned_cols=212 Identities=13% Similarity=0.188 Sum_probs=158.1
Q ss_pred EEEEEcCcCCCceEEEecCCEEEEEEEeCCCCCceeecCcccCCCCCCCCCCCC-C--------CCCcCCCCceEEEEEe
Q 012225 50 QVIAINGKFPGAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQG-T--------NCPIPSQWNWTYQFQV 120 (468)
Q Consensus 50 ~~~~~Ng~~PgP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~-t--------q~~I~PG~~~~y~f~~ 120 (468)
..+++| ++|||+|||++||+|+|+|+|.++++++|||||++.. +.+||++. + ||+|+||++|+|+|++
T Consensus 50 ~~~~~n-~~pGP~I~v~~Gd~v~v~~~N~l~~~~siH~HGl~~~--~~~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~~ 126 (306)
T 1sdd_A 50 PQSRTS-GLLGPTLYAEVGDIMKVHFKNKAHKPLSIHAQGIKYS--KFSEGASYSDHTLPMEKMDDAVAPGQEYTYEWII 126 (306)
T ss_dssp CCCSSC-CSCCCCEEEETTCEEEEEEEECSSSCBCCEEESSCCC--TTTSCCCSCCCCCHHHHTTTCBCTTCEEEEEEEC
T ss_pred cccccC-CccCCEEEEeCCCEEEEEEEECCCCcccEeecceecc--cccCCCccCCCCcccccCCCccCCCCeEEEEEEe
Confidence 445678 6899999999999999999999999999999999843 34555543 2 7999999999999999
Q ss_pred CCC---------ceeeEEeeCccc--cccCCeeecEEEecCCCC---CCCCCCCCCcEEEEEeeeeecchHHHHHHhhcC
Q 012225 121 KDQ---------IGSFFYFPSLNL--QRVSGGFGPVIINNRKVI---PIPFDQPEGDIIFLIGDWYTRNHTALRTALDSG 186 (468)
Q Consensus 121 ~~~---------~Gt~wyH~H~~~--q~~~Gl~G~liV~~~~~~---~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~g 186 (468)
+++ +||||||||... |+.+||+|+|||+++... +.+. ..|+|++++++||..... ..
T Consensus 127 ~~~~gp~~~d~~~GT~wYHsH~~~~~q~~~GL~G~liV~~~~~~~~~~~~~-~~d~e~~l~~~d~d~~~~--------~~ 197 (306)
T 1sdd_A 127 SEHSGPTHDDPPCLTHIYYSYVNLVEDFNSGLIGPLLICKKGTLTEDGTQK-MFEKQHVLMFAVFDESKS--------WN 197 (306)
T ss_dssp CGGGSCCSSSCSEEEEEEECCSSSHHHHHTTCCEEEEEECTTCBCTTSSBS-SSCCCCCCBCCEEETTSS--------SS
T ss_pred CCccCCCCCCCCceEEEEeccCCchhhhccCceEEEEEccCCCCCccCCcC-cccceEEEEEEecccccc--------cc
Confidence 643 379999999775 889999999999987431 1122 458999999999853210 00
Q ss_pred CCCCCCceEEEcCcCCCCCCCccCCCCCcceEEEEcCCCEEEEEEEEcCCC-CeeeEEEeCCeeEEEEeeCccccceeec
Q 012225 187 KDLDMPDGVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTS-TSLNFRIQNHNLLLVETEGHYTSQQNYT 265 (468)
Q Consensus 187 ~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~Via~DG~~~~p~~~d 265 (468)
...++.++|||+... ..+.+++++|++|||||+|++.. ..+.||+|||.|++ ||. .+|
T Consensus 198 --~~~~~~~~ING~~~~-----------~~p~l~v~~G~~vrlrliN~g~~~~~h~~hlhG~~~~~---dG~-----~~d 256 (306)
T 1sdd_A 198 --QTSSLMYTVNGYVNG-----------TMPDITVCAHDHISWHLIGMSSGPELFSIHFNGQVLEQ---NHH-----KIS 256 (306)
T ss_dssp --CCCCEEECSSSCCSS-----------CCCCCCCCCC------BBCCCSSSCEECCBCSSTTCEE---TTE-----ECS
T ss_pred --cCCCcceeeCCEecC-----------CCcceEEcCCCEEEEEEEeCCCCCccEEEEECCcEeee---CCE-----Ecc
Confidence 123578999999862 23779999999999999999986 57889999999985 874 479
Q ss_pred eEEEcCCceEEEEEEecCCCCcceEEEEEec
Q 012225 266 SFEIHVGQSYSFLVTMDQNASSDYYIVASAR 296 (468)
Q Consensus 266 ~i~l~pGqR~dv~v~~~~~~g~~y~i~~~~~ 296 (468)
++.|+||||+|+++++++ +| .|+++.+..
T Consensus 257 tv~l~pger~~v~~~~~~-pG-~~~~hch~~ 285 (306)
T 1sdd_A 257 AITLVSATSTTANMTVSP-EG-RWTIASLIP 285 (306)
T ss_dssp CCCEETTCCBC---------C-CCCCBCCST
T ss_pred eEEECCCcEEEEEEEcCC-Ce-EEEEEeCCh
Confidence 999999999999999985 57 788877654
No 34
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=100.00 E-value=2.6e-42 Score=375.37 Aligned_cols=240 Identities=15% Similarity=0.182 Sum_probs=179.2
Q ss_pred EEEEEEEEECCC-CceEEEEEEcCcCCCceEEEecCCEEEEEEEeCCCCCceeecCcccCC----CCCCCCCCC---CCC
Q 012225 34 DFKVSYITASPL-GVPQQVIAINGKFPGAVLNATTNNNIVINVQNDLDESLLMTWPGIQMR----RNSWQDGVQ---GTN 105 (468)
Q Consensus 34 ~l~~~~~~~~~d-G~~~~~~~~Ng~~PgP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~----~~~~~DGv~---~tq 105 (468)
.++++....... |+.+..|+ ++|||+|||++||+|+|+|+|++++++||||||+++. +.+++||++ .||
T Consensus 50 ~l~~~~~~~~~~~~~~~~~~~---~~pGP~Ir~~~GD~v~V~v~N~l~~~tsIHwHGl~~~~~~DG~p~~Dg~~~~~vtq 126 (742)
T 2r7e_A 50 TLFVEFTDHLFNIAKPRPPWM---GLLGPTIQAEVYDTVVITLKNMASHPVSLHAVGVSYWKASEGAEYDDQTSQREKED 126 (742)
T ss_dssp CCCCCCSSSCCCCSSCSTTTT---TTSEEEEEECSEEEEECCEECCSSSCCCCCCSSSCCCSSSSCCCSSCSCCSSSSSS
T ss_pred EEEEEecceEEECCccccccc---CCcCCeEEEECCCEEEEEEEECCCCCEeEEecCcccCccccCCccCCCCccccccc
Confidence 444444344443 55555554 8999999999999999999999999999999999875 344455554 279
Q ss_pred CCcCCCCceEEEEEeCC---------CceeeEEeeCccc--cccCCeeecEEEecCCCCCCCCCCCCCcEEEEEee----
Q 012225 106 CPIPSQWNWTYQFQVKD---------QIGSFFYFPSLNL--QRVSGGFGPVIINNRKVIPIPFDQPEGDIIFLIGD---- 170 (468)
Q Consensus 106 ~~I~PG~~~~y~f~~~~---------~~Gt~wyH~H~~~--q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d---- 170 (468)
|+|+||++|+|+|++++ ++||||||||... |+.+||+|+|||++++..........+|+++++++
T Consensus 127 ~~I~PG~s~tY~f~v~~~~gP~~~d~~~GT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~e~~l~~~~~de~ 206 (742)
T 2r7e_A 127 DKVFPGGSHTYVWQVLKENGPMASDPLCLTYSYLSHVDLVKDLNSGLIGALLVCREGSLAKEKTQTLHKFILLFAVFDEG 206 (742)
T ss_dssp SSCCTTCEECCEEEECGGGSCCSSSCSSCCEEECCCSCSHHHHHHHCCEEEEECSSSCTTTTTTTCCCEECCCEECCCCS
T ss_pred CcCCCCCeEEEEEEeccccCCCcCCCCcEEEEEccCCChHHHhhCCcEEEEEEecCcccCcccCceeeEEEEEeecccCC
Confidence 99999999999999853 3699999999875 89999999999999764322111224888888865
Q ss_pred --eeecchHHHHHHhhcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceEEEEcCCCEEEEEEEEcCCCC-eeeEEEeCC
Q 012225 171 --WYTRNHTALRTALDSGKDLDMPDGVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTST-SLNFRIQNH 247 (468)
Q Consensus 171 --~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~-~~~~~i~gh 247 (468)
|+++........+........++.++|||+.. +..+.+++++|++|||||+|++... .|.||||||
T Consensus 207 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~ING~~~-----------~~~~~l~v~~Ge~vrlrliN~g~~~~~h~~hlhGh 275 (742)
T 2r7e_A 207 KSWHSETKNSLMQDRDAASARAWPKMHTVNGYVN-----------RSLPGLIGCHRKSVYWHVIGMGTTPEVHSIFLEGH 275 (742)
T ss_dssp SSSCCCCCC-------CCSCCCCCCCCEETTBCT-----------BCCCCCEECSSSCEEEECCCCCSSSCCCCCCCTTC
T ss_pred ccccccccccccccCCCccccccCceEEECCccC-----------CCCcceEEcCCCEEEEEEEeCCCCCcceEEEECCC
Confidence 44432211110111111112356789999985 1236789999999999999999875 799999999
Q ss_pred eeEEEEeeCccccceeeceEEEcCCceEEEEEEecCCCCcceEEEEEecc
Q 012225 248 NLLLVETEGHYTSQQNYTSFEIHVGQSYSFLVTMDQNASSDYYIVASARF 297 (468)
Q Consensus 248 ~~~Via~DG~~~~p~~~d~i~l~pGqR~dv~v~~~~~~g~~y~i~~~~~~ 297 (468)
.|+|++. .+|++.|.|||+++|.+++++ +| .|.+..+...
T Consensus 276 ~f~Vvg~--------~~Dtv~v~Pg~~~~v~~~~~~-pG-~w~~hCH~~~ 315 (742)
T 2r7e_A 276 TFLVRNH--------RQASLEISPITFLTAQTLLMD-LG-QFLLFCHISS 315 (742)
T ss_dssp CCEETTE--------ECCSCCCCTTCCCEEEECCCS-CS-EECCCCCSSS
T ss_pred EEEEEeE--------ecceEEeCCCcEEEEEEEeCC-Ce-eEEEEeCChh
Confidence 9999742 368999999999999999995 67 8888776543
No 35
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=100.00 E-value=4.9e-42 Score=373.73 Aligned_cols=249 Identities=12% Similarity=0.141 Sum_probs=194.0
Q ss_pred cCccEEEEEEEEEEE--ECCCCc---------------eEEE-E------EEcC-----------cCCCceEEEecCCEE
Q 012225 27 EDDTIFYDFKVSYIT--ASPLGV---------------PQQV-I------AING-----------KFPGAVLNATTNNNI 71 (468)
Q Consensus 27 ~~~~~~~~l~~~~~~--~~~dG~---------------~~~~-~------~~Ng-----------~~PgP~i~~~~Gd~v 71 (468)
...+|+|.|.+++.. .+|+|. .+++ + +|++ ++|||+||+++||+|
T Consensus 130 ~g~~r~y~i~a~e~~wdyap~~~~~~~~~~~~~~~g~~y~k~~~~~y~~~~f~~~~~~~~~~~~l~~pGP~Ir~~~GD~v 209 (770)
T 2r7e_B 130 QKKTRHYFIAAVERLWDYGMSSSPHVLRNRAQSGSVPQFKKVVFQEFTDGSFTQPLYRGELNEHLGLLGPYIRAEVEDNI 209 (770)
T ss_dssp CCCCEEEEEEEEECCCCCCSCCCCTTTTSSCCCCCCCCCCCEEEEECSSSCTTTTCCCCSTTTTCCSCCCCCCCCSSSCE
T ss_pred CCCEEEEEEEEEEEEEeecCCCcccccccccccccccceeeEEEEEeccCceeccccccccccccCCCCCeEEEEcCCEE
Confidence 456899999999987 466653 1222 2 2223 689999999999999
Q ss_pred EEEEEeCCCCCceeecCcccCCCCCCCCCCCCCCCCcCCCCceEEEEEeCC---------CceeeEEeeCccc--cccCC
Q 012225 72 VINVQNDLDESLLMTWPGIQMRRNSWQDGVQGTNCPIPSQWNWTYQFQVKD---------QIGSFFYFPSLNL--QRVSG 140 (468)
Q Consensus 72 ~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~y~f~~~~---------~~Gt~wyH~H~~~--q~~~G 140 (468)
+|+|+|.++++++|||||+++..... ||++++||+|+||++|+|+|++++ ++||||||||... |+.+|
T Consensus 210 ~v~~~N~l~~~~siH~HG~~~~~~~~-dG~~~~~~~I~PG~~~tY~f~~~~~~gp~~~d~~~Gt~wYHsh~~~~~q~~~G 288 (770)
T 2r7e_B 210 MVTFRNQASRPYSFYSSLISYEEDQR-QGAEPRKNFVKPNETKTYFWKVQHHMAPTKDEFDCKAWAYSSDVDLEKDVHSG 288 (770)
T ss_dssp EEEEECCSSSCCCCCBTTCCCCCCSS-SCTTTTSSCCCSSCEEEEECCCCSSSSCCSSCCSEEEEEECCCSSSSHHHHTS
T ss_pred EEEEEECCCCCcceeecccccccccC-CCCcCccCccCCCCeEEEEEEecCccCCccCCCCCeeEEeeccCCcHHHHhCC
Confidence 99999999999999999999876543 699889999999999999999974 7999999999875 78999
Q ss_pred eeecEEEecCCCCCC--CCCCCCCcEEEEEee------eeecchHHHHHHhh-cCC------C-CCCCceEEEcCcCCCC
Q 012225 141 GFGPVIINNRKVIPI--PFDQPEGDIIFLIGD------WYTRNHTALRTALD-SGK------D-LDMPDGVLINGKGPYR 204 (468)
Q Consensus 141 l~G~liV~~~~~~~~--~~~~~~~e~~l~l~d------~~~~~~~~~~~~~~-~g~------~-~~~~~~~liNG~~~~~ 204 (468)
|+|+|||+++..... ....+++|++|++++ |+++... ...+. ... . ....+.++|||+..
T Consensus 289 L~G~liV~~~~~~~~~~~~~~~d~E~vl~~~~~de~~swy~~~~~--~~~~~~p~~~~~~d~~~~~~~~~~~ING~~~-- 364 (770)
T 2r7e_B 289 LIGPLLVCHTNTLNPAHGRQVTVQEFALFFTIFDETKSWYFTENM--ERNCRAPCNIQMEDPTFKENYRFHAINGYIM-- 364 (770)
T ss_dssp CCEEEEEECSTTSCSSSCCCCSSEEEECCCCEECCSSSSCTTGGG--SSCSCCSSCCCSSSSSSTTTSCEECTTSCTT--
T ss_pred ceeeEEECCCcccccccCCCccceEEEEEEeecCccccchhccch--hhcccCccccccCCccccccCCccccCCccC--
Confidence 999999999764211 112457899998765 4443211 00000 000 0 01235689999985
Q ss_pred CCCccCCCCCcceEEEEcCCCEEEEEEEEcCCC-CeeeEEEeCCeeEEEEeeCccccceeeceEEEcCCceEEEEEEecC
Q 012225 205 YNTTLVPDGIEYETINVDPGKTYRVRVHNVGTS-TSLNFRIQNHNLLLVETEGHYTSQQNYTSFEIHVGQSYSFLVTMDQ 283 (468)
Q Consensus 205 ~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~Via~DG~~~~p~~~d~i~l~pGqR~dv~v~~~~ 283 (468)
+..+.+++++|++|||||+|++.. ..|.||||||.|+|++.||. .+|++.|.||||++|++++++
T Consensus 365 ---------~~~~~l~v~~Ge~vr~rliN~g~~~~~H~fHlhGh~f~Vv~~dg~-----~~Dtv~l~Pg~~~~v~~~ad~ 430 (770)
T 2r7e_B 365 ---------DTLPGLVMAQDQRIRWYLLSMGSNENIHSIHFSGHVFTVRKKEEY-----KMALYNLYPGVFETVEMLPSK 430 (770)
T ss_dssp ---------TTCCCCCCCSSSCEEEECCCCCSSSCCCEEEBSSCCEECCSSSCC-----EESEEECCTTCCCEEEECCSS
T ss_pred ---------CCCCCeEEeCCCEEEEEEEeCCCCcceEEEEEcCCEEEEEecCCc-----eeeEEEECCCeEEEEEEEeCC
Confidence 123678999999999999999875 47999999999999999974 689999999999999999996
Q ss_pred CCCcceEEEEEec
Q 012225 284 NASSDYYIVASAR 296 (468)
Q Consensus 284 ~~g~~y~i~~~~~ 296 (468)
+| .|.++.+..
T Consensus 431 -pG-~w~~hcH~~ 441 (770)
T 2r7e_B 431 -AG-IWRVECLIG 441 (770)
T ss_dssp -CB-CCCBCCCSH
T ss_pred -CC-ceEEEeccc
Confidence 57 788877653
No 36
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=100.00 E-value=1.6e-37 Score=322.22 Aligned_cols=333 Identities=14% Similarity=0.068 Sum_probs=213.8
Q ss_pred ccCccEEEEEEEEEEEECCCCceEEEEEEcCcCCCceEEEecCCEEEEEEEeCCCCCceeecCcccCCCCCCCCCCCCCC
Q 012225 26 AEDDTIFYDFKVSYITASPLGVPQQVIAINGKFPGAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQGTN 105 (468)
Q Consensus 26 a~~~~~~~~l~~~~~~~~~dG~~~~~~~~Ng~~PgP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq 105 (468)
+++.++++.++++...+.++| .+++|||++ ||+|+|++||+|+|+|+|.+...+++||||... .++
T Consensus 24 ~~~~~~~~~~~~~~~~~~f~g---~~~~vNG~~-~p~i~v~~Gd~v~~~~~N~~~~~h~~~~~g~~~----------~~~ 89 (447)
T 2dv6_A 24 HAPVVFTLRTGIAEGRMVYIG---VGGDIDHKI-NPTLVVHEGETVQVNLVNGEGAQHDVVVDQYAA----------RSA 89 (447)
T ss_dssp CCCEEEEEEEEEETTEEEEEE---ESGGGTTCB-SCCEEEETTCEEEEEEECSSSSCBCCEETTTTE----------ECC
T ss_pred CCCceEEEEEEecccEEEEec---cceeecCCc-CCeEEEcCCCEEEEEEEcCCCCceEEEEccCCc----------ccc
Confidence 344567777776654455544 456999999 999999999999999999998889999999731 168
Q ss_pred CCcCCCCceEEEEEeCCCceeeEEeeCccccccCCeeecEEEecCCCCCCCCC-----CCC------------CcEEEEE
Q 012225 106 CPIPSQWNWTYQFQVKDQIGSFFYFPSLNLQRVSGGFGPVIINNRKVIPIPFD-----QPE------------GDIIFLI 168 (468)
Q Consensus 106 ~~I~PG~~~~y~f~~~~~~Gt~wyH~H~~~q~~~Gl~G~liV~~~~~~~~~~~-----~~~------------~e~~l~l 168 (468)
|+|+||++++|.|++. ++||||||||...|+.+||+|.|+|+++.......+ ... ..+.+.+
T Consensus 90 ~~i~pG~~~~~~f~~~-~~Gt~~y~~~~~~h~~~Gm~G~i~V~~~~~~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~l 168 (447)
T 2dv6_A 90 IVNGKNASSTFSFVAS-KVGEFNYYCSIAGHRQAGMEGNIQVLPGNRAEMKSSGADITRDPADLPGPIGPRQAKTVRIDL 168 (447)
T ss_dssp CBCSTTBEEEEEEECC-SCEEEEEECCSTTHHHHTCEEEEEEESSCCCCCCCSSBCCBCCTTCSCCCCCSCCCCEEEEEE
T ss_pred eecCCCCeEEEEEEcC-CCEEEEEEeCCCChhhCCCEEEEEEeCCccccCCCcchhhccChhhcCCccccCCCcEEEEEE
Confidence 9999999999999995 699999999998899999999999998654211000 000 0111111
Q ss_pred eeeeecchHHHHHHhhcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceEEEEcCCCEEEEEEEEcCC-CCeeeEEEeCC
Q 012225 169 GDWYTRNHTALRTALDSGKDLDMPDGVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGT-STSLNFRIQNH 247 (468)
Q Consensus 169 ~d~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~-~~~~~~~i~gh 247 (468)
..-... ..+..| ...+.++|||+.. .|+|++++|++|||||+|.+. ...+.+|+||.
T Consensus 169 ~~~~~~------~~~~~g---~~~~~~~~NG~~p-------------gp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~ 226 (447)
T 2dv6_A 169 ETVEVK------GQLDDN---TTYTYWTFNGKVP-------------GPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGA 226 (447)
T ss_dssp EEEEEE------EEEETT---EEEEEEEETTBBS-------------CCCEEEETTCEEEEEEEECTTCSSCBCCEETTC
T ss_pred EEEEEE------EeccCC---ceeEEEEECCccC-------------CCeEEecCCCEEEEEEEeCCCCceeEEEeeccc
Confidence 100000 000001 2246799999863 288999999999999999985 34677777774
Q ss_pred eeEEEEeeCccccceeeceEEEcCCceEEEEEEecCCCCcceEEEEEecccccccccccceEEEEEEcCCCCCCCCCCCC
Q 012225 248 NLLLVETEGHYTSQQNYTSFEIHVGQSYSFLVTMDQNASSDYYIVASARFVNESFWQRVTGVAILHYSNSKGAASGPLPE 327 (468)
Q Consensus 248 ~~~Via~DG~~~~p~~~d~i~l~pGqR~dv~v~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~ 327 (468)
++.||.+ +.+.|.||||+++++++++ +| +||++.+....... ......+.|.|.... .+|.
T Consensus 227 ----~~~DG~~------~~~~i~pG~~~~~~~~~~~-~G-~~~yh~h~~~~~~~--~~~Gl~g~l~v~~~~-----~~P~ 287 (447)
T 2dv6_A 227 ----TGPGGAA------AFTQTDPGEETVVTFKALI-PG-IYVYHCATPSVPTH--ITNGMYGLLLVEPEG-----GLPQ 287 (447)
T ss_dssp ----CSGGGGG------GGCCBCTTCEEEEEEECCS-CE-EEEEECCSSSHHHH--HHTTCEEEEEEECTT-----CSCC
T ss_pred ----cCCCCCC------ccEEeCCCCEEEEEEECCC-Ce-EEEEEeCCCChHHH--HhCCCEEEEEEeCCC-----CCCC
Confidence 2578864 3346999999999999986 57 99999875311000 113345677776432 1221
Q ss_pred CCCCCcccccccCCccccccCCCCCCCCCCCCCCCCCCccccceEEEEecCCCcccCCeEEEEEcCeeccCCCCchhhhc
Q 012225 328 APSDIYNQWAAMTQPRSIRQNTSASGARPNPQGSFHYGSINITDTYVLRSLPPVTIDGKVRSTLNGISFVKPETPIRLAD 407 (468)
Q Consensus 328 ~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~i~l~~~~~~~~~g~~~~~iN~~s~~~p~~P~l~~~ 407 (468)
. +.+..+. ..+.. .. ... ..+ +....+ +.. . .......|.|||++|....
T Consensus 288 ----~-d~~~~~~-~~~~~--~~-~~~-~~~------g~~~~~----~~~--~-~~~~~~~~~iNG~~~~~~~------- 337 (447)
T 2dv6_A 288 ----V-DREFYVM-QGEIY--TV-KSF-GTS------GEQEMD----YEK--L-INEKPEYFLFNGSVGSLTR------- 337 (447)
T ss_dssp ----C-SEEEEEE-EEEEC--BS-SCT-TCC------EECCBB----HHH--H-HTTCCSEEEETTSTTCCCC-------
T ss_pred ----C-CeeEEEE-ecccc--cC-Ccc-ccc------ccccCC----hHH--h-hccCCCEEEECCcccCCCC-------
Confidence 1 1111000 00000 00 000 000 000000 000 0 0011346899998873110
Q ss_pred ccCCCcccccCCCCCCCCCCCCcceEEEEecCCcEEEEEEecCC-CCCCceeccCCCceeeC
Q 012225 408 KYNVKGAYKLDFPNKPLTRPPRTDRSLINATYKGFIEIILQNND-TKMQSFHMDGYSFFVVG 468 (468)
Q Consensus 408 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~Veivi~N~~-~~~HP~HLHGh~F~Vlg 468 (468)
..++.++.|++|+|+|.|.+ ...||||||||+|+||+
T Consensus 338 ------------------------~~~~~v~~g~~vrlrliN~~~~~~h~~hlhGh~f~vv~ 375 (447)
T 2dv6_A 338 ------------------------SHPLYASVGETVRIFFGVGGPNFTSSFHVIGEIFDHVY 375 (447)
T ss_dssp ------------------------CCCEEECTTCEEEEEEEEEESSCCEEEEEETCCEEEEC
T ss_pred ------------------------CcceEECCCCEEEEEEEeCCCCceEeEEEcCcEEEEEE
Confidence 12366789999999999986 56899999999999986
No 37
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=100.00 E-value=1e-37 Score=339.28 Aligned_cols=217 Identities=14% Similarity=0.152 Sum_probs=167.5
Q ss_pred CcCCCceEEEecCCEEEEEEEeCCCCCceeecCcccCCCCCCCCC-----CCC-CCCCcCCCCceEEEEEeCCCce----
Q 012225 56 GKFPGAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDG-----VQG-TNCPIPSQWNWTYQFQVKDQIG---- 125 (468)
Q Consensus 56 g~~PgP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DG-----v~~-tq~~I~PG~~~~y~f~~~~~~G---- 125 (468)
..+|||+||+++||+|+|+|+|.+++++||||||+++. ++++|| ++. +||+|+||++|+|+|++++++|
T Consensus 447 ~g~pGP~Ir~~~GD~v~v~~~N~l~~~~siHwHGl~~~-~~~~DG~~~~G~~~~~~~~I~PG~t~tY~f~~~~~agPg~~ 525 (742)
T 2r7e_A 447 SGILGPLLYGEVGDTLLIIFKNQASRPYNIYPHGITDV-RPLYSRRLPKGVKHLKDFPILPGEIFKYKWTVTVEDGPTKS 525 (742)
T ss_dssp SCSCCCCCCCBTTCEEECCEECCSSSCBCCEETTCSEE-CCTTCSCCSSSCSSTTTSCCBSSCEECCEEECCSTTSCCSS
T ss_pred cCCCCCeEEEECCCEEEEEEEeCCCCCcCEEecccccC-CcccccccCCCCcccccccCCCCCeEEEEEEeccccCCccc
Confidence 35799999999999999999999999999999999874 466665 555 8999999999999999975554
Q ss_pred -----eeEEeeCccc--cccCCeeecEEEecCCCCC-CC-CCCCCCcEEEEEeee------eecchHHHHHHhh-cC-CC
Q 012225 126 -----SFFYFPSLNL--QRVSGGFGPVIINNRKVIP-IP-FDQPEGDIIFLIGDW------YTRNHTALRTALD-SG-KD 188 (468)
Q Consensus 126 -----t~wyH~H~~~--q~~~Gl~G~liV~~~~~~~-~~-~~~~~~e~~l~l~d~------~~~~~~~~~~~~~-~g-~~ 188 (468)
|||||||... |+.+||+|+|||+++.... .. ....|+|++|++++| +++. .+..... .. ..
T Consensus 526 d~~~gT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~d~E~~l~~~~fde~~~wy~~~--~~~~~~~~p~~v~ 603 (742)
T 2r7e_A 526 DPRCLTRYYSSFVNMERDLASGLIGPLLICYKESVDQRGNQIMSDKRNVILFSVFDENRSWYLTE--NIQRFLPNPAGVQ 603 (742)
T ss_dssp SCSCCCCEEECCSSSSSTGGGSCCEECCCBCCCSCCCCCCSSCCSCCCEEEECBCCGGGSSCSHH--HHHHHSSSSSCSC
T ss_pred CCCceEEEEecCcchhhhhhccceeeEEEcCccccccccCcCCCCceEEEEeecccccccccccc--chhhcccCchhcc
Confidence 9999999764 6899999999999875311 11 125589999999754 3321 1111110 00 00
Q ss_pred CC------CCceEEEcCcCCCCCCCccCCCCCcceEEEEcCCCEEEEEEEEcCCC-CeeeEEEeCCeeEEEEeeCccccc
Q 012225 189 LD------MPDGVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTS-TSLNFRIQNHNLLLVETEGHYTSQ 261 (468)
Q Consensus 189 ~~------~~~~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~Via~DG~~~~p 261 (468)
.. ....++|||+.+. .. .+.+++|++|||||+|+|.. ..|.|||+||.|+|+ +
T Consensus 604 ~~~~~~~~~~~~~~ING~~~~-----------~~-~l~v~~Ge~vr~rliN~g~~~~~h~~HlhGh~f~v~--------~ 663 (742)
T 2r7e_A 604 LEDPEFQASNIMHSINGYVFD-----------SL-QLSVCLHEVAYWYILSIGAQTDFLSVFFSGYTFKHK--------M 663 (742)
T ss_dssp CCCHHHHGGGCCBCTTTTCSS-----------CC-CCCCCSSCCCEEEEEECSSCCCCCCCEESSSCCCCB--------S
T ss_pred cccccccccCceeeecCcCCC-----------CC-cEEEeCCCEEEEEEEeCCCCcceEEEEEcCcEEEEe--------c
Confidence 00 0124789999861 12 38999999999999998764 469999999999986 4
Q ss_pred eeeceEEEcCCceEEEEEEecCCCCcceEEEEEecc
Q 012225 262 QNYTSFEIHVGQSYSFLVTMDQNASSDYYIVASARF 297 (468)
Q Consensus 262 ~~~d~i~l~pGqR~dv~v~~~~~~g~~y~i~~~~~~ 297 (468)
..+|++.|.||||++|++++++ +| .|.+..+...
T Consensus 664 ~~~Dtv~l~Pg~~~~v~~~ad~-pG-~w~~hcH~~~ 697 (742)
T 2r7e_A 664 VYEDTLTLFPFSGETVFMSMEN-PG-LWILGCHNSD 697 (742)
T ss_dssp SSBCSSCCCCCSSEECCEECCC-CC-CSCCEECCCS
T ss_pred cceeEEEECCCcEEEEEEEcCC-Ce-EEEEEeCCch
Confidence 5689999999999999999985 57 8999887653
No 38
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=100.00 E-value=3.7e-34 Score=323.29 Aligned_cols=227 Identities=13% Similarity=0.118 Sum_probs=168.5
Q ss_pred ceEEEEEEcCcCCC--ceEEEecCCEEEEEEEeCCCCCceeecCcccCCC-CCCCCCCCC-CCCCcCCCCceEEEEEeCC
Q 012225 47 VPQQVIAINGKFPG--AVLNATTNNNIVINVQNDLDESLLMTWPGIQMRR-NSWQDGVQG-TNCPIPSQWNWTYQFQVKD 122 (468)
Q Consensus 47 ~~~~~~~~Ng~~Pg--P~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~-~~~~DGv~~-tq~~I~PG~~~~y~f~~~~ 122 (468)
..+.+.++||++|| |+|++++||+|+++|.|. .+.+||||+++.+ +.++||++. | |+|.||.+++|.|++ +
T Consensus 616 ~~~~~~~iNG~~~g~~P~l~~~~gd~v~~~v~~~---g~~~~~Hgl~~~g~t~~~dG~~~~t-~~i~pg~~~t~~~~~-~ 690 (1065)
T 2j5w_A 616 ESNKMHSMNGFMYGNQPGLTMCKGDSVVWYLFSA---GNEADVHGIYFSGNTYLWRGERRDT-ANLFPQTSLTLHMWP-D 690 (1065)
T ss_dssp HHTEEEEETTBCTTCCCCCEEETTCCEEEEEECC---CSTTCCEEEEETTCCEEETTEEESE-EEECTTCEEEEEECC-C
T ss_pred ccceEEEEeeEecCCCCceEEeCCCEEEEEEEcC---CCcceEEeeEEeCCceeecCeecce-EeecCCceEEEEEec-C
Confidence 57799999999999 889999999999999976 4559999999988 899999987 7 999999999999999 5
Q ss_pred CceeeEEeeCccccccCCeeecEEEecCCCCCCCCCCCCCcEEEEE----eeeeecchHHHHHHh-h-cCCCCCCCceEE
Q 012225 123 QIGSFFYFPSLNLQRVSGGFGPVIINNRKVIPIPFDQPEGDIIFLI----GDWYTRNHTALRTAL-D-SGKDLDMPDGVL 196 (468)
Q Consensus 123 ~~Gt~wyH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l----~d~~~~~~~~~~~~~-~-~g~~~~~~~~~l 196 (468)
++||||||||++.|+.+||+|+++|++......+...++.|.+++| .||+++....+...+ . .+. .|...+
T Consensus 691 ~~Gt~~~h~h~~~~~~~Gm~g~~~V~~~~~~~~~~~~yd~e~~~~iaa~~~dW~~~~~~~~~~~~~~~~~~---~p~~~~ 767 (1065)
T 2j5w_A 691 TEGTFNVECLTTDHYTGGMKQKYTVNQCRRQSEDSTFYLGERTYYIAAVEVEWDYSPQREWEKELHHLQEQ---NVSNAF 767 (1065)
T ss_dssp SCEEEEEEECSHHHHHTTCEEEEEEECCSCCCSCCCCCSEEEEEEEEEEEEEEESCSCCHHHHHHHHHHTC---CCCCTT
T ss_pred CCeEEEEecCCCcccCCCcEEEEEEcCCccccCCccCCCcceEEEEeeeeccccCCcchhhhhhccCCCcc---Ccccee
Confidence 8999999999999999999999999987543334336688999999 899998766543211 1 111 144455
Q ss_pred EcCcCCC------------CCCCccCC----------CCCcceEEEEcCCCEEEEEEEEcCCCCeeeEEEeCCeeEEEEe
Q 012225 197 INGKGPY------------RYNTTLVP----------DGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVET 254 (468)
Q Consensus 197 iNG~~~~------------~~~~~~~~----------~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~Via~ 254 (468)
+|+.... ..+.+... .....|+|++++|+++++|+.|.... .+.+|.||. ++...
T Consensus 768 ~n~~~~~iG~tY~k~~y~~~~d~tft~~~~r~~~~~~v~~pGP~I~v~~Gd~v~v~l~N~~~~-~~sih~HGl--~~~~~ 844 (1065)
T 2j5w_A 768 LDKGEFYIGSKYKKVVYRQYTDSTFRVPVERKAEEEHLGILGPQLHADVGDKVKIIFKNMATR-PYSIHAHGV--QTESS 844 (1065)
T ss_dssp TCCTTTCCCSEEEEEEEEEESSTTCCSBCCCCGGGGGGTTSCCCEEEETTEEEEEEEEECSSS-CBCCEESSC--BCSCS
T ss_pred ecCCCccccceEeeeEEEEEcCCcceecccCCccccccCCCCCEEEEecCCEEEEEEEeCCCC-CceEeeccc--cccCC
Confidence 5543210 00011000 12235899999999999999999654 577777764 33222
Q ss_pred eCccccceeeceEEEcCCceEEEEEEecCC---------CCcceEEEEEe
Q 012225 255 EGHYTSQQNYTSFEIHVGQSYSFLVTMDQN---------ASSDYYIVASA 295 (468)
Q Consensus 255 DG~~~~p~~~d~i~l~pGqR~dv~v~~~~~---------~g~~y~i~~~~ 295 (468)
| ...+.||+++...+.+.+. +| .||.+.+.
T Consensus 845 -~---------~~~i~PG~~~ty~~~~~~~~gp~~~~~~~g-t~wYhsh~ 883 (1065)
T 2j5w_A 845 -T---------VTPTLPGETLTYVWKIPERSGAGTEDSACI-PWAYYSTV 883 (1065)
T ss_dssp -C---------CCCBCTTCEEEEEEECCGGGSCCTTSCSEE-EEEEECCT
T ss_pred -C---------CceeCCCCeEEEEEEecCccCCccccCCce-EEEEecCC
Confidence 1 1256799998888876542 24 78887654
No 39
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=99.68 E-value=6.7e-18 Score=138.92 Aligned_cols=90 Identities=12% Similarity=0.173 Sum_probs=71.9
Q ss_pred CcCCCceEEEecCCEEEEEEEeCCCCCceeecCcccCCCC--CCCCCCCCCCCCcCCCCceEEEEEeCCCceeeEEeeCc
Q 012225 56 GKFPGAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRN--SWQDGVQGTNCPIPSQWNWTYQFQVKDQIGSFFYFPSL 133 (468)
Q Consensus 56 g~~PgP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~--~~~DGv~~tq~~I~PG~~~~y~f~~~~~~Gt~wyH~H~ 133 (468)
-+|++|+|++++||+|+ ++|....++++||||...... ..+||.+.+++.|.||++++|.|++++++|+||||||
T Consensus 14 ~~f~p~~i~v~~Gd~V~--~~N~~~~~H~v~~~~~~~~~~~g~~~~~~~~~~~~i~pG~~~~~~f~~~~~~G~y~y~C~- 90 (105)
T 3cvb_A 14 FQFEPANVTVHPGDTVK--WVNNKLPPHNILFDDKQVPGASKELADKLSHSQLMFSPGESYEITFSSDFPAGTYTYYCA- 90 (105)
T ss_dssp SCEESSEEEECTTEEEE--EEECSSCCEEEEECTTSSGGGCHHHHHHHCEEEEECSTTCEEEEEECTTSCSEEEEEECT-
T ss_pred cEEeCCEEEEcCCCEEE--EEECCCCCCeEEEeCCCCCcccccccccccccccccCCCCeEEEEEecCCCCeeEEEEeC-
Confidence 35778999999999975 679988999999999865321 0122222245789999999999998558999999999
Q ss_pred cccccCCeeecEEEec
Q 012225 134 NLQRVSGGFGPVIINN 149 (468)
Q Consensus 134 ~~q~~~Gl~G~liV~~ 149 (468)
.|..+||.|.|+|++
T Consensus 91 -~H~~~GM~G~i~V~~ 105 (105)
T 3cvb_A 91 -PHRGAGMVGKITVEG 105 (105)
T ss_dssp -TTGGGTCEEEEEECC
T ss_pred -CchhcCCEEEEEEcC
Confidence 577889999999974
No 40
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=99.65 E-value=4.6e-15 Score=153.15 Aligned_cols=238 Identities=11% Similarity=0.039 Sum_probs=152.0
Q ss_pred cEEEEEEEEEEEECCCCc-----------eEEEEEEcCcCCCceEEEecCCEEEEEEEeCCC-CCceeec-CcccCCCCC
Q 012225 30 TIFYDFKVSYITASPLGV-----------PQQVIAINGKFPGAVLNATTNNNIVINVQNDLD-ESLLMTW-PGIQMRRNS 96 (468)
Q Consensus 30 ~~~~~l~~~~~~~~~dG~-----------~~~~~~~Ng~~PgP~i~~~~Gd~v~v~v~N~l~-~~~siH~-HG~~~~~~~ 96 (468)
.+++.|.++.-....+|. ....++|||+. .|+|+|++| ++++||.|... ....+|+ ||..... .
T Consensus 152 ~~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~d~~liNG~~-~p~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~v-i 228 (451)
T 2uxt_A 152 VDDFPVIIQDKRLDNFGTPEYNEPGSGGFVGDTLLVNGVQ-SPYVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHV-I 228 (451)
T ss_dssp TTEEEEEEEEEEECTTSCEECCCCSSSCCCCSEEEETTEE-SCEEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEE-E
T ss_pred CceEEEEEEeeecCCCCceecccccCCCCcCCEEEECCcc-cceEEecCC-EEEEEEEccCCceeEEEEECCCCeEEE-E
Confidence 467888888766554443 34689999996 699999999 99999999986 4678999 8876543 4
Q ss_pred CCCCCC----C--CCCCcCCCCceEEEEEeCCCceeeEEeeCccccccCCeee-----------cE-EEecCCCCCCCCC
Q 012225 97 WQDGVQ----G--TNCPIPSQWNWTYQFQVKDQIGSFFYFPSLNLQRVSGGFG-----------PV-IINNRKVIPIPFD 158 (468)
Q Consensus 97 ~~DGv~----~--tq~~I~PG~~~~y~f~~~~~~Gt~wyH~H~~~q~~~Gl~G-----------~l-iV~~~~~~~~~~~ 158 (468)
..||.+ . .+..|.|||++++.+++. +.|+||++++........+.| ++ -+....... +.
T Consensus 229 ~~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~-~~- 305 (451)
T 2uxt_A 229 SGDQGFLPAPVSVKQLSLAPGERREILVDMS-NGDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLP-LV- 305 (451)
T ss_dssp ECSSSEEEEEEEESSEEECTTCEEEEEEECT-TCCCEEEEC----------------CCCCSCCEEEEEEECSCCC----
T ss_pred EeCCCccCCceEeceEEECceeEEEEEEEeC-CCCEEEEEecCccccccccccccccCCCCCCcceEEEEecCCCc-Cc-
Confidence 589963 2 557799999999999995 689999999864332211111 11 111111000 00
Q ss_pred CCCCcEEEEEeeeeecch-HHHHHHhhcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceEEEEcCCCEEEEEEEEcCCC
Q 012225 159 QPEGDIIFLIGDWYTRNH-TALRTALDSGKDLDMPDGVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTS 237 (468)
Q Consensus 159 ~~~~e~~l~l~d~~~~~~-~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~ 237 (468)
..+++..|..+..-.. ......+..+ ..++|||+.+.. ..+.+.++.|++++|+|+|.
T Consensus 306 --~~~~p~~L~~~~~~~~~~~~~~~~~l~------~~~~iNg~~f~~----------~~~~~~~~~G~~~~~~l~N~--- 364 (451)
T 2uxt_A 306 --TDSLPMRLLPTEIMAGSPIRSRDISLG------DDPGINGQLWDV----------NRIDVTAQQGTWERWTVRAD--- 364 (451)
T ss_dssp ----CCCSCSSSSCCCCCCCSEEEEEEEC------SSSSBTTBCCCT----------TCCCEEEETTCEEEEEEEEE---
T ss_pred --cccCccccCCCCCCCCCCcceEEEEEe------eEEEECCEeCCC----------CCCcEEcCCCCEEEEEEECC---
Confidence 0000000000000000 0000000000 047899998731 12468999999999999998
Q ss_pred CeeeEEEeCCeeEEEEeeCccc---cceeeceEEEcCCceEEEEEEecCCCC---cceEEEEEecc
Q 012225 238 TSLNFRIQNHNLLLVETEGHYT---SQQNYTSFEIHVGQSYSFLVTMDQNAS---SDYYIVASARF 297 (468)
Q Consensus 238 ~~~~~~i~gh~~~Via~DG~~~---~p~~~d~i~l~pGqR~dv~v~~~~~~g---~~y~i~~~~~~ 297 (468)
..|.||+|||.|+|++.||.+. +|...|++.+ |+++.+.++++++ | +.|-++.+...
T Consensus 365 ~~HP~HLHGh~F~Vl~~~G~~~~~~~p~~rDTv~v--g~~~~i~~~~dnp-g~~~g~w~~HCHil~ 427 (451)
T 2uxt_A 365 EPQAFHIEGVMFQIRNVNGAMPFPEDRGWKDTVWV--DGQVELLVYFGQP-SWAHFPFYFNSQTLE 427 (451)
T ss_dssp EEEEEEETTCEEEEEEETTBCCCGGGSSCBSEEEE--EEEEEEEEECCSC-CBTTBCEEEEESSHH
T ss_pred CCcCeEECCceEEEEeeCCcCCCcccCCCccEEEE--CCEEEEEEEeCCC-CCCCCceEEeCCchh
Confidence 4799999999999999999865 3677999999 9999999999864 4 13777777543
No 41
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=99.64 E-value=5.5e-16 Score=149.86 Aligned_cols=99 Identities=15% Similarity=0.218 Sum_probs=85.0
Q ss_pred EEEcCcC--CCceEEEecCCEEEEEEEeCCCCCceeecCcccCCCCCCCCCC-------CC--CCCCcCCCCceEEEEEe
Q 012225 52 IAINGKF--PGAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGV-------QG--TNCPIPSQWNWTYQFQV 120 (468)
Q Consensus 52 ~~~Ng~~--PgP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv-------~~--tq~~I~PG~~~~y~f~~ 120 (468)
|+|||+. ++|.|++++||+|+++|.|.....+++||||...... .||. +. ..+.|.||++++|.|++
T Consensus 157 ~~iNG~~~~~~p~i~v~~G~~vri~l~N~~~~~Hp~HlHG~~f~v~--~~G~~~~p~~~~~~~Dtv~v~pg~~~~~~~~~ 234 (276)
T 3kw8_A 157 MTINNRKPHTGPDFEATVGDRVEIVMITHGEYYHTFHMHGHRWADN--RTGILTGPDDPSRVIDNKITGPADSFGFQIIA 234 (276)
T ss_dssp TEETTCCTTCCCCEEEETTCEEEEEEEEESSCCEEEEETTCCEESS--SSSSCCSTTCCCCEESEEEECTTCEEEEEEET
T ss_pred cccceecccCCCCEEEecCCEEEEEEecCCCcceeEEEccceeEEe--ccCccCCCcccccCCccEEeCCCceEEEEEEe
Confidence 6999998 8999999999999999999999999999999865432 3443 11 34669999999999998
Q ss_pred CC--CceeeEEeeCccccccCCeeecEEEecCCC
Q 012225 121 KD--QIGSFFYFPSLNLQRVSGGFGPVIINNRKV 152 (468)
Q Consensus 121 ~~--~~Gt~wyH~H~~~q~~~Gl~G~liV~~~~~ 152 (468)
.+ .+|+||||||...|...||+|.|+|++++.
T Consensus 235 ~~~~npG~w~~HCH~~~H~~~GM~g~~~V~~~~~ 268 (276)
T 3kw8_A 235 GEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDG 268 (276)
T ss_dssp TTTTCSEEEEEEECSHHHHHTTCEEEEEEECTTS
T ss_pred ccCCCCCeEEEECCCchHhhCCCeEEEEEeCCCC
Confidence 42 599999999999999999999999999765
No 42
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=99.64 E-value=7.4e-15 Score=151.23 Aligned_cols=232 Identities=11% Similarity=0.083 Sum_probs=159.6
Q ss_pred cEEEEEEEEEEEECC------------CCceEEEEEEcCcCCCceEEEecCCEEEEEEEeCCC-CCceeecCcccCCCCC
Q 012225 30 TIFYDFKVSYITASP------------LGVPQQVIAINGKFPGAVLNATTNNNIVINVQNDLD-ESLLMTWPGIQMRRNS 96 (468)
Q Consensus 30 ~~~~~l~~~~~~~~~------------dG~~~~~~~~Ng~~PgP~i~~~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~ 96 (468)
.+++.|.++.-.... .|.....+++||+. .|.|+|++| ++++|+.|... ....+|++|..... .
T Consensus 146 ~~e~~l~l~D~~~~~~~~~~~~~~~~~~g~~~~~~~iNG~~-~p~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~v-i 222 (439)
T 2xu9_A 146 AEEHLLVLKDLALQGGRPAPHTPMDWMNGKEGDLVLVNGAL-RPTLVAQKA-TLRLRLLNASNARYYRLALQDHPLYL-I 222 (439)
T ss_dssp SEEEEEEEEEECEETTEECCCCHHHHHHCCCCSEEEETTEE-SCEEECSSS-EEEEEEEECCSSCCEEEEETTBCEEE-E
T ss_pred CCcEEEEEEeeeeCCCCcCCCCccccccCCCCCEEEECCcc-CCcEEecCC-eEEEEEEecCCCceEEEEECCceEEE-E
Confidence 467777776643321 13344689999997 699999999 99999999986 46789999986543 4
Q ss_pred CCCCCCC------CCCCcCCCCceEEEEEeCCCceeeEEeeCcccc--cc-CCe--------------eecEEEe--cCC
Q 012225 97 WQDGVQG------TNCPIPSQWNWTYQFQVKDQIGSFFYFPSLNLQ--RV-SGG--------------FGPVIIN--NRK 151 (468)
Q Consensus 97 ~~DGv~~------tq~~I~PG~~~~y~f~~~~~~Gt~wyH~H~~~q--~~-~Gl--------------~G~liV~--~~~ 151 (468)
..||.+. ....|.|||+++..+++. ++|.||++|+.... .. .|| ....+++ ...
T Consensus 223 ~~DG~~~~~p~~~~~l~l~pgeR~dv~v~~~-~~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 301 (439)
T 2xu9_A 223 AADGGFLEEPLEVSELLLAPGERAEVLVRLR-KEGRFLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNP 301 (439)
T ss_dssp EETTEEEEEEEEESCEEECTTCEEEEEEECC-SSEEEEEEEECCCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSSC
T ss_pred ecCCCCCCCceEeceEEECCceeEEEEEEcC-CCceEEEEecccccCCccccccccccccccCCCCCcceeEEEEecCCC
Confidence 5799752 335689999999999995 69999999984211 10 122 1122222 211
Q ss_pred C-CCC-----CCCCC---CCcEEEEEeeeeecchHHHHHHhhcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceEEEEc
Q 012225 152 V-IPI-----PFDQP---EGDIIFLIGDWYTRNHTALRTALDSGKDLDMPDGVLINGKGPYRYNTTLVPDGIEYETINVD 222 (468)
Q Consensus 152 ~-~~~-----~~~~~---~~e~~l~l~d~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~v~ 222 (468)
. .+. ++... ..+..+.|.- . . . ...+.|||+.+.. ....+.++
T Consensus 302 ~~~~~p~~l~~~~~l~~~~~~r~~~l~~-----~------~-~------g~~~~iNg~~~~~----------~~~~~~~~ 353 (439)
T 2xu9_A 302 KPLPLPKALSPFPTLPAPVVTRRLVLTE-----D------M-M------AARFFINGQVFDH----------RRVDLKGQ 353 (439)
T ss_dssp CCCCCCSCCCCCCCCCCCSEEEEEEEEE-----E------G-G------GTEEEETTBCCCT----------TCCCEEEC
T ss_pred ccccCcccCCCcccCCCCCcceEEEEEe-----e------c-c------CceEeECCEECCC----------CCCceecC
Confidence 1 001 11000 0001111110 0 0 0 1368999998721 12458999
Q ss_pred CCCEEEEEEEEcCCCCeeeEEEeCCeeEEEEeeCcccc-ceeeceEEEcCCceEEEEEEecCCCCcceEEEEEec
Q 012225 223 PGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYTS-QQNYTSFEIHVGQSYSFLVTMDQNASSDYYIVASAR 296 (468)
Q Consensus 223 ~G~~~rlRliN~~~~~~~~~~i~gh~~~Via~DG~~~~-p~~~d~i~l~pGqR~dv~v~~~~~~g~~y~i~~~~~ 296 (468)
.|++++|+|+|.+.. .|.||+|||.|+|++.+|.... |...|++.+.||+++.+.+++++ +| .|-++.+..
T Consensus 354 ~g~~~~~~~~N~~~~-~HP~HLHG~~F~Vl~~~g~~~~~p~~rDTv~v~p~~~v~i~f~adn-pG-~w~~HCHil 425 (439)
T 2xu9_A 354 AQTVEVWEVENQGDM-DHPFHLHVHPFQVLSVGGRPFPYRAWKDVVNLKAGEVARLLVPLRE-KG-RTVFHCHIV 425 (439)
T ss_dssp TTCEEEEEEEECSSS-CEEEEESSCCBEEEEETTEECSSCCCBSEEEECTTCEEEEEEECCS-CE-EEEEEESSH
T ss_pred CCCEEEEEEEcCCCC-CCCceeCCCcEEEEeeCCCCCCCCCCeEEEEeCCCCEEEEEEEcCC-CC-CEEEECCcc
Confidence 999999999999865 6999999999999999997654 77899999999999999999874 67 777777754
No 43
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=99.58 E-value=1.9e-15 Score=150.33 Aligned_cols=82 Identities=21% Similarity=0.232 Sum_probs=64.7
Q ss_pred ceEEEcCcCCCCCCCccCCCCCcceEEEEcCCCEEEEEEEEcCCCCeeeEEEeCCeeEEEEe---eCccccceeeceEEE
Q 012225 193 DGVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVET---EGHYTSQQNYTSFEI 269 (468)
Q Consensus 193 ~~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~Via~---DG~~~~p~~~d~i~l 269 (468)
..+++||+.. .|+|++++|+++|+||+|.... .+++|.|| +.+.+. ||.+. ++...|
T Consensus 24 ~~~~~NG~~p-------------GP~I~v~~Gd~v~v~v~N~l~~-~~siH~HG--~~~~~~~~~DGvp~----vtq~~I 83 (339)
T 2zwn_A 24 KVFGFNGQVP-------------GPLIHVQEGDDVIVNVTNNTSL-PHTIHWHG--VHQKGTWRSDGVPG----VTQQPI 83 (339)
T ss_dssp EEEEETTBSS-------------CCEEEEETTCEEEEEEEEESSS-CBCCEEET--CCCTTCGGGSCCBT----TTBCCB
T ss_pred EEEEECCccC-------------CCeEEEECCCEEEEEEEECCCC-CccEEeCC--CCcCCCcccCCCCc----cccCcc
Confidence 5799999864 3999999999999999999865 35555555 555554 99763 345679
Q ss_pred cCCceEEEEEEecCCCCcceEEEEEec
Q 012225 270 HVGQSYSFLVTMDQNASSDYYIVASAR 296 (468)
Q Consensus 270 ~pGqR~dv~v~~~~~~g~~y~i~~~~~ 296 (468)
.||||+++.++++ .+| +||.+.+..
T Consensus 84 ~PG~~~~y~f~~~-~~G-t~wyH~H~~ 108 (339)
T 2zwn_A 84 EAGDSYTYKFKAD-RIG-TLWYHCHVN 108 (339)
T ss_dssp CTTCEEEEEEECC-SCE-EEEEECCSS
T ss_pred CCCCeEEEEEECC-CCE-EEEEEecCC
Confidence 9999999999998 467 999988754
No 44
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=99.55 E-value=3.3e-13 Score=141.22 Aligned_cols=261 Identities=10% Similarity=0.056 Sum_probs=161.1
Q ss_pred EEEEEEEEEEECCCCc-----eEEEEEEcCcCC--------CceEEEecCCEEEEEEEeCCC-CCceeecCcccCCCCCC
Q 012225 32 FYDFKVSYITASPLGV-----PQQVIAINGKFP--------GAVLNATTNNNIVINVQNDLD-ESLLMTWPGIQMRRNSW 97 (468)
Q Consensus 32 ~~~l~~~~~~~~~dG~-----~~~~~~~Ng~~P--------gP~i~~~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~~ 97 (468)
++.|.++.-....++. ....++|||+.. .|+|+|++|+++++||.|... ....+|++|..... ..
T Consensus 143 e~~l~l~Dw~~~~~~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~v-i~ 221 (503)
T 1hfu_A 143 NTIITLADWYHIPAPSIQGAAQPDATLINGKGRYVGGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTI-IE 221 (503)
T ss_dssp TSEEEEEEECSSCGGGCC---CCSEEEETTBCCBTTCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEE-EE
T ss_pred eEEEEEcccccCChHHhcCCCCCCEEEECcccccCCCCCCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEE-Ee
Confidence 5566665544333332 235789999853 289999999999999999986 46789999886543 46
Q ss_pred CCCCCC-----CCCCcCCCCceEEEEEeCCCceeeEEeeCccc--c-----ccCCeeecEEEecCCCCCCCCCCCCCcEE
Q 012225 98 QDGVQG-----TNCPIPSQWNWTYQFQVKDQIGSFFYFPSLNL--Q-----RVSGGFGPVIINNRKVIPIPFDQPEGDII 165 (468)
Q Consensus 98 ~DGv~~-----tq~~I~PG~~~~y~f~~~~~~Gt~wyH~H~~~--q-----~~~Gl~G~liV~~~~~~~~~~~~~~~e~~ 165 (468)
.||.+. ....|.|||+++..+++.+.+|.||.+++... + ...|+..+++.-.......|......+.
T Consensus 222 ~DG~~~~p~~~~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~~~~- 300 (503)
T 1hfu_A 222 VDGELTEPHTVDRLQIFTGQRYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTTSANPNP- 300 (503)
T ss_dssp ETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCSSCCCCCCCSSC-
T ss_pred ccCccccccccCeEEEcccceEEEEEEcCCCccceeeeeccccCCcccccccCCCceEEEEEECCCCCCCCCCCCCCcc-
Confidence 899742 34568999999999999645799999998431 1 2233433444332111110110000000
Q ss_pred EEEeeeeecch--HHH---------HHHhhcCCCCCCCceEEEcCcCCCCCCCc-----cCC------CCCcceEEEEcC
Q 012225 166 FLIGDWYTRNH--TAL---------RTALDSGKDLDMPDGVLINGKGPYRYNTT-----LVP------DGIEYETINVDP 223 (468)
Q Consensus 166 l~l~d~~~~~~--~~~---------~~~~~~g~~~~~~~~~liNG~~~~~~~~~-----~~~------~~~~~~~~~v~~ 223 (468)
..+.+...... ... ...+..... .....|.|||+.+...... ..+ .......+.++.
T Consensus 301 ~~l~~~~l~p~~~~~~p~~~~~~~~~~~~~l~~~-~~~~~~~iNg~~~~~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~~ 379 (503)
T 1hfu_A 301 AQLNEADLHALIDPAAPGIPTPGAADVNLRFQLG-FSGGRFTINGTAYESPSVPTLLQIMSGAQSANDLLPAGSVYELPR 379 (503)
T ss_dssp CBCCGGGCBBSSSCSCSSCSSTTCSSEEEECCEE-EETTEEEETTBCCCCCSSCHHHHHHTTCCSGGGSSSTTSEEEECS
T ss_pred CCCccccccccCccCCCCcccCCcceEEEEEEee-ccCceEEECCCccCCCCCcchhhhhcCCcccccCCCCceEEEccC
Confidence 00000000000 000 000000000 0012688999986321100 000 001236789999
Q ss_pred CCEEEEEEEEcCCCCeeeEEEeCCeeEEEEeeCcc----ccceeeceEEE-cCCceEEEEEEecCCCCcceEEEEEecc
Q 012225 224 GKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHY----TSQQNYTSFEI-HVGQSYSFLVTMDQNASSDYYIVASARF 297 (468)
Q Consensus 224 G~~~rlRliN~~~~~~~~~~i~gh~~~Via~DG~~----~~p~~~d~i~l-~pGqR~dv~v~~~~~~g~~y~i~~~~~~ 297 (468)
|++++++++|......|.||+|||.|.|++.+|.. ..|...|++.+ .||+++.+.+++++ +| .|.++.+...
T Consensus 380 g~~vei~l~~n~~~~~HP~HLHGh~F~Vl~~~~~~~~n~~~p~~rDTV~V~ppg~~v~irf~adn-PG-~W~~HCHil~ 456 (503)
T 1hfu_A 380 NQVVELVVPAGVLGGPHPFHLHGHAFSVVRSAGSSTYNFVNPVKRDVVSLGVTGDEVTIRFVTDN-PG-PWFFHCHIEF 456 (503)
T ss_dssp SCEEEEEEECCSTTCCCEEEETTCCEEEEECTTCCCCCCSSBCEESEEECCSTTCEEEEEEECCS-CE-EEEEEESSHH
T ss_pred CCEEEEEEECCCCCCCCCEEEecceEEEEecCCCCccccCCCCeeeeEEecCCCceEEEEEEcCC-Ce-eeeEecCchh
Confidence 99999999964444579999999999999999865 24788999999 79999999999985 67 7778877653
No 45
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=99.55 E-value=2.5e-13 Score=142.64 Aligned_cols=239 Identities=13% Similarity=0.138 Sum_probs=151.8
Q ss_pred EEEEEcCcCC---------CceEEEecCCEEEEEEEeCCC-CCceeecCcccCCCCCCCCCCCC-----CCCCcCCCCce
Q 012225 50 QVIAINGKFP---------GAVLNATTNNNIVINVQNDLD-ESLLMTWPGIQMRRNSWQDGVQG-----TNCPIPSQWNW 114 (468)
Q Consensus 50 ~~~~~Ng~~P---------gP~i~~~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~~~DGv~~-----tq~~I~PG~~~ 114 (468)
..++|||+.. -|+|+|++|+++++|+.|... ....+|++|..... ...||.+. ....|.|||++
T Consensus 192 d~~liNG~~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~v-i~~DG~~~~p~~~~~l~l~pgqR~ 270 (521)
T 1v10_A 192 DTTLINGLGRNSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTV-IEVDGVSHQPLTVDSLTIFAGQRY 270 (521)
T ss_dssp SEEEETTBCCCSSCGGGSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEE-EEETTEEEEEEEESBEEECTTCEE
T ss_pred CEEEECCcccCCCCCCCCCceEEEECCCCEEEEEEEecCCcccEEEEECCCeEEE-EecCCccccceeeeeEEEcccceE
Confidence 5789999843 189999999999999999986 46789999986543 45899742 34568999999
Q ss_pred EEEEEeCCCceeeEEeeCccc---cccCCeeecEEEecCCCCCCCCCCCCCcEEEEEeeeeecch--H---------HHH
Q 012225 115 TYQFQVKDQIGSFFYFPSLNL---QRVSGGFGPVIINNRKVIPIPFDQPEGDIIFLIGDWYTRNH--T---------ALR 180 (468)
Q Consensus 115 ~y~f~~~~~~Gt~wyH~H~~~---q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~--~---------~~~ 180 (468)
+..+++.+.+|.||.+++... ....|+..+++.-.......|..... +. ..+.+...... . ...
T Consensus 271 dvlv~~~~~~g~y~i~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~-~~-~~~~~~~l~p~~~~~~p~~~~~~~~~ 348 (521)
T 1v10_A 271 SVVVEANQAVGNYWIRANPSNGRNGFTGGINSAIFRYQGAAVAEPTTSQN-SG-TALNEANLIPLINPGAPGNPVPGGAD 348 (521)
T ss_dssp EEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTCCSCCCCCCCC-CS-CBCCGGGCCBSSCCCCSSCSSTTCSS
T ss_pred EEEEEcCCCCCceeeeeccccccccCCCCceeEEEEECCCCCCCCCCCCC-cc-cccchhhcccCCcccCCCcccCCcce
Confidence 999999645799999998532 12234433444332211111110000 00 00000000000 0 000
Q ss_pred H--HhhcCCCCCCCceEEEcCcCCCCCCCc-----cCC------CCCcceEEEEcCCCEEEEEEEEcCCCCeeeEEEeCC
Q 012225 181 T--ALDSGKDLDMPDGVLINGKGPYRYNTT-----LVP------DGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNH 247 (468)
Q Consensus 181 ~--~~~~g~~~~~~~~~liNG~~~~~~~~~-----~~~------~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh 247 (468)
. .+..+.. .....|.|||+.+...... ..+ .......+.++.|++++++++| ...|.||+|||
T Consensus 349 ~~~~l~~~~~-~~~~~~~iNg~~~~~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~~g~~vei~l~N---~~~HP~HLHGh 424 (521)
T 1v10_A 349 INLNLRIGRN-ATTADFTINGAPFIPPTVPVLLQILSGVTNPNDLLPGGAVISLPANQVIEISIPG---GGNHPFHLHGH 424 (521)
T ss_dssp EEEECCEECC-SSSSCCEESSCCCCCCSSCHHHHHHHTCCCGGGSSSTTTEEEECTTCEEEEEEEC---CBSCEEEESSC
T ss_pred EEEEEEEecC-CceeEEEECCCcccCCCCchhhhhhcCCcccccCCCCceEEEecCCCEEEEEEcC---CCCCCEEEccc
Confidence 0 0000000 0112688999986321100 000 0012367899999999999999 34699999999
Q ss_pred eeEEEEeeCcc----ccceeeceEEE-cCCceEEEEEEecCCCCcceEEEEEecc
Q 012225 248 NLLLVETEGHY----TSQQNYTSFEI-HVGQSYSFLVTMDQNASSDYYIVASARF 297 (468)
Q Consensus 248 ~~~Via~DG~~----~~p~~~d~i~l-~pGqR~dv~v~~~~~~g~~y~i~~~~~~ 297 (468)
.|.|++.+|.. ..|...|++.+ .+|+++.+.+++++ +| .|-++.+...
T Consensus 425 ~F~Vl~~~~~~~~n~~~p~~rDTV~V~p~gg~v~Irf~aDN-PG-~W~~HCHi~~ 477 (521)
T 1v10_A 425 NFDVVRTPGSSVYNYVNPVRRDVVSIGGGGDNVTFRFVTDN-PG-PWFLHCHIDW 477 (521)
T ss_dssp CEEEEECTTCSCCCCSSCCEESEEECCBSSCEEEEEEECCS-CE-EEEEEESCHH
T ss_pred eEEEEecCCCCccccCCCCeeeeEEeCCCCcEEEEEEEeCC-Ce-eEEEeeChHH
Confidence 99999999865 34788999999 79999999999985 67 7777877654
No 46
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=99.53 E-value=2.8e-14 Score=125.22 Aligned_cols=99 Identities=13% Similarity=0.200 Sum_probs=74.8
Q ss_pred CCceEEEEEEcCcCCCceEEEecCCEEEEEEEeCCCCCceeecCcccCCCCCCCCCC------CCC--CCCcCCCC--ce
Q 012225 45 LGVPQQVIAINGKFPGAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGV------QGT--NCPIPSQW--NW 114 (468)
Q Consensus 45 dG~~~~~~~~Ng~~PgP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv------~~t--q~~I~PG~--~~ 114 (468)
.|+....+.++|. ++|+|++++||+|+|+++|... ...|++.+.+.++++.+.. +.+ ...|.||+ +.
T Consensus 46 ~~~~~~~~~~~g~-~~p~i~V~~GD~V~~~~tN~~~--~~~H~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~PG~sgt~ 122 (154)
T 2cal_A 46 PGFPFPSFEVHDK-KNPTLEIPAGATVDVTFINTNK--GFGHSFDITKKGPPYAVMPVIDPIVAGTGFSPVPKDGKFGYT 122 (154)
T ss_dssp TTSCSSCEEETTE-ESCEEEECTTCEEEEEEEECCT--TCCCCCEEESCCSCCCSSCCCCSEEEEBCCCCCCBTTBEEEE
T ss_pred cCCccccccccCC-CCCEEEEeCCCEEEEEEEcCCC--CeeeEEEEeecCcchhccccccccccccccccccCCCCceEE
Confidence 3444445666776 5799999999999999999743 4467777765544433211 110 12789999 99
Q ss_pred EEEEEeCCCceeeEEeeCccccccCCeeecEEEe
Q 012225 115 TYQFQVKDQIGSFFYFPSLNLQRVSGGFGPVIIN 148 (468)
Q Consensus 115 ~y~f~~~~~~Gt~wyH~H~~~q~~~Gl~G~liV~ 148 (468)
+|.|++ ++|+||||||...|..+||+|.|+|+
T Consensus 123 t~tft~--~pGtY~y~C~~~gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 123 DFTWHP--TAGTYYYVCQIPGMAATGMFGKIVVK 154 (154)
T ss_dssp EEEECC--CSEEEEEECCSTTTGGGTCEEEEEEC
T ss_pred EEEEEE--CCceEEEECCCCCHHHCCCEEEEEEC
Confidence 999997 69999999999889999999999985
No 47
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=99.49 E-value=7.6e-14 Score=138.85 Aligned_cols=104 Identities=14% Similarity=0.177 Sum_probs=85.1
Q ss_pred EEEcCcC--CCceEEEecCCEEEEEEEeCCCCCceeecCcccCCCCCCCCCCC-------C--CCCCcCCCCceEEEEEe
Q 012225 52 IAINGKF--PGAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQ-------G--TNCPIPSQWNWTYQFQV 120 (468)
Q Consensus 52 ~~~Ng~~--PgP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~-------~--tq~~I~PG~~~~y~f~~ 120 (468)
|+|||+. ..|.|++++||+|+++|.|.....+++|+||...... .||.. . ....|.||++++|.|++
T Consensus 198 ~~iNG~~~~~~~~l~v~~Ge~vri~l~N~g~~~HpfHlHGh~f~v~--~~G~~~~p~~~~~~~Dtv~v~PG~~~~v~~~~ 275 (343)
T 3cg8_A 198 MTINNRKPHTGPDFEATVGDRVEIVMITHGEYYHTFHMHGHRWADN--RTGILTGPDDPSRVIDNKITGPADSFGFQIIA 275 (343)
T ss_dssp TEETTCCTTCCCCEEEETTCEEEEEEEEESSCCEEEEETTCCEESS--SSSSCCSTTCCCCEESEEEECTTCEEEEEEET
T ss_pred ceecccCCCCCccEEeCCCCEEEEEEEcCCccccccEecCcEEEEe--ccCcccCCCCcccceeeEEeCCCCEEEEEEEE
Confidence 6899986 3789999999999999999999999999999864432 23321 1 23569999999999996
Q ss_pred --CCCceeeEEeeCccccccCCeeecEEEecCCCCCCCC
Q 012225 121 --KDQIGSFFYFPSLNLQRVSGGFGPVIINNRKVIPIPF 157 (468)
Q Consensus 121 --~~~~Gt~wyH~H~~~q~~~Gl~G~liV~~~~~~~~~~ 157 (468)
.+.+|+||||||...+...||.|.|+|.+++.....|
T Consensus 276 ~~~~~pG~w~~HCHi~~H~~~GM~g~~~V~~~~~~~P~y 314 (343)
T 3cg8_A 276 GEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDGTIPGY 314 (343)
T ss_dssp TTTTCSEEEEEEECSHHHHHTTCEEEEEEECTTSCCSCC
T ss_pred CCCCCCeeEEEeCCCHHHHhccCcEEEEEecCCCCCCCC
Confidence 2579999999999999999999999999876543333
No 48
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=99.47 E-value=2.1e-13 Score=113.34 Aligned_cols=105 Identities=16% Similarity=0.140 Sum_probs=77.9
Q ss_pred EEEEEEEEEEEE-----CCCCceEEE-EEEcCcCCCceEEEecCCEEEEEEEeCCCCCceeecCcccCCCCCCCCCCCCC
Q 012225 31 IFYDFKVSYITA-----SPLGVPQQV-IAINGKFPGAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQGT 104 (468)
Q Consensus 31 ~~~~l~~~~~~~-----~~dG~~~~~-~~~Ng~~PgP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~t 104 (468)
|+|.+.+.+... ..+|..... ..+|++|+++.|++++||+|+++++|.... +||+.... .| -
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~f~p~~i~v~~G~~V~~~~~n~d~~-----~H~~~i~~----~~---~ 69 (112)
T 1iby_A 2 HNFNVVINAYDTTIPELNVEGVTVKNIRAFNVLNEPETLVVKKGDAVKVVVENKSPI-----SEGFSIDA----FG---V 69 (112)
T ss_dssp CCEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEESCEEEEETTCEEEEEEEECSSS-----CEEEEEGG----GT---E
T ss_pred CceeEEEEeccCccccEEeccEEEEEEEEEeeEEcCCEEEEeCCCEEEEEEEECCCC-----eEEEEEcC----CC---c
Confidence 345555555443 335665555 489999999999999999999999999865 55654321 12 1
Q ss_pred CCCcCCCCceEEEEEeCCCceeeEEeeCccccccCCeeecEEEec
Q 012225 105 NCPIPSQWNWTYQFQVKDQIGSFFYFPSLNLQRVSGGFGPVIINN 149 (468)
Q Consensus 105 q~~I~PG~~~~y~f~~~~~~Gt~wyH~H~~~q~~~Gl~G~liV~~ 149 (468)
+..+.||++++|.|++ +++|+||||||...... +|.|.|+|++
T Consensus 70 ~~~i~pG~~~~~~f~~-~~~G~y~~~C~~~~~~~-~M~g~i~V~~ 112 (112)
T 1iby_A 70 QEVIKAGETKTISFTA-DKAGAFTIWCQLHPKNI-HLPGTLNVVE 112 (112)
T ss_dssp EEEECTTCEEEEEEEC-CSCEEEEEBCSSSCTTT-BCCEEEEEEC
T ss_pred eeEeCCCCEEEEEEEC-CCCEEEEEECCCCCchH-HCEEEEEEeC
Confidence 4668999999999998 68999999998654332 3999999974
No 49
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=99.45 E-value=2.6e-12 Score=133.00 Aligned_cols=241 Identities=12% Similarity=0.113 Sum_probs=157.8
Q ss_pred EEEEEEEEEEEECCCCc-------------eEEEEEEcCcCCCceEEEecCCEEEEEEEeCCC-CCceeecCcccCCCCC
Q 012225 31 IFYDFKVSYITASPLGV-------------PQQVIAINGKFPGAVLNATTNNNIVINVQNDLD-ESLLMTWPGIQMRRNS 96 (468)
Q Consensus 31 ~~~~l~~~~~~~~~dG~-------------~~~~~~~Ng~~PgP~i~~~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~ 96 (468)
++| |.++......+|. ....+++||+. .|+|+|++|+ ++|+.|... ....+|++|..... .
T Consensus 181 ~~~-l~l~D~~~~~~g~~~~~~~~~~~~g~~gd~~lvNG~~-~p~l~v~~g~--RlRliNa~~~~~~~l~i~g~~~~v-I 255 (481)
T 3zx1_A 181 EKD-LMISDLRLDENAQIPNNNLNDWLNGREGEFVLINGQF-KPKIKLATNE--RIRIYNATAARYLNLRIQGAKFIL-V 255 (481)
T ss_dssp EEE-EEEEEECCBTTSCCCCCCHHHHHHCCCCSEEEETTEE-SCEEEEETTE--EEEEEECCSSCCEEEEETTCEEEE-E
T ss_pred cee-EEEEEEeccCCCccccccchhhccCCcCCEEEECCcc-CceEEecCCC--EEEEEecCCCeEEEEEECCCceEE-E
Confidence 555 6676655555553 23678999996 5899999999 999999975 66789999987543 5
Q ss_pred CCCCC----CC--CCCCcCCCCceEEEEEeCCCceeeEEeeCccccccCCee----------ecEEEecCC-CCCC----
Q 012225 97 WQDGV----QG--TNCPIPSQWNWTYQFQVKDQIGSFFYFPSLNLQRVSGGF----------GPVIINNRK-VIPI---- 155 (468)
Q Consensus 97 ~~DGv----~~--tq~~I~PG~~~~y~f~~~~~~Gt~wyH~H~~~q~~~Gl~----------G~liV~~~~-~~~~---- 155 (468)
..||. |. ....|.|||+++..++++ +.|+|..-++.... +|+. .-+-+.... ..+.
T Consensus 256 a~DGg~~~~P~~~~~l~l~pgeR~dvlv~~~-~~~~~~l~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~lP~~l~~ 332 (481)
T 3zx1_A 256 GTDGGLIEKTIYKEELFLSPASRVEVLIDAP-KDGNFKLESAYYDR--DKMMVKEEPNTLFLANINLKKENVELPKNLKI 332 (481)
T ss_dssp EETTEEEEEEEEESSEEECTTCEEEEEEECS-SCEEEEEEECCCCC--CCSSCCCCCCCEEEEEEEEECCCCCCCSCSCC
T ss_pred EcCCCccCCceEeCeEEECCccEEEEEEEcC-CCcEEEEEEecccc--cCccccCCCCceeEEEEecCCCCccCCccccC
Confidence 68873 32 446699999999999995 68888777653221 1111 111222111 0010
Q ss_pred --CCCCCCCcEEEEEeeeeecchHHHHHHhhcCCCC---CCCceEEEcCcCCCCCCCccCCCCCcceEEEEcCCCEEEEE
Q 012225 156 --PFDQPEGDIIFLIGDWYTRNHTALRTALDSGKDL---DMPDGVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVR 230 (468)
Q Consensus 156 --~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~g~~~---~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlR 230 (468)
+.+..+.+..+.|+....+ +......+... .....++|||+.+. ...+.+.++.|++++|+
T Consensus 333 ~~~~~~~~~~r~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~iNG~~~~----------~~~~~~~~~~G~~v~w~ 398 (481)
T 3zx1_A 333 FKPSEEPKEFKEIIMSEDHMQ----MHGMMGKSEGELKIALASMFLINRKSYD----------LKRIDLSSKLGVVEDWI 398 (481)
T ss_dssp CCCCCCCCEEEEEEEEECCST----TTTGGGCCHHHHHHHHHTTEEETTBCCC----------TTCCCEEEETTCCEEEE
T ss_pred CCCCCCCCcEEEEEEeccchh----cccccccccccccccccceeEECCEeCC----------CCCceEEeCCCCEEEEE
Confidence 1111223334444322110 00000000000 00125899999872 12366899999999999
Q ss_pred EEEcCCCCeeeEEEeCCeeEEEEe--eCcccc---ceeeceEEEcCCceEEEEEEecCCCCcceEEEEEec
Q 012225 231 VHNVGTSTSLNFRIQNHNLLLVET--EGHYTS---QQNYTSFEIHVGQSYSFLVTMDQNASSDYYIVASAR 296 (468)
Q Consensus 231 liN~~~~~~~~~~i~gh~~~Via~--DG~~~~---p~~~d~i~l~pGqR~dv~v~~~~~~g~~y~i~~~~~ 296 (468)
|+|.+.. .|.||+|||.|+|++. ||.... +...|++.+.||+++.+.++++ .+| .|-++.+..
T Consensus 399 l~N~~~~-~Hp~HlHG~~F~vl~~~~~g~~~~~~~~~~kDTv~v~Pg~~~~i~~~~d-~pG-~w~~HCHil 466 (481)
T 3zx1_A 399 VINKSHM-DHPFHIHGTQFELISSKLNGKVQKAEFRALRDTINVRPNEELRLRMKQD-FKG-LRMYHCHIL 466 (481)
T ss_dssp EEECSSS-CEEEEETTCCEEEEEEEETTEEEECSSCCEESEEEECTTCEEEEEECCC-SCE-EEEEEESSH
T ss_pred EEcCCCC-ceeEEEeccEEEEEEecccCCCCCcccCcccceEEECCCCEEEEEEEcC-CCe-eEEEEcCCh
Confidence 9997765 6999999999999999 897654 4578999999999999999997 467 777777643
No 50
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=99.44 E-value=1.3e-13 Score=135.79 Aligned_cols=84 Identities=18% Similarity=0.215 Sum_probs=68.1
Q ss_pred ceEEEcCcCCCCCCCccCCCCCcceEEEEcCCCEEEEEEEEcCCCCeeeEEEeCCeeEE-EEeeCccccceeeceEEEcC
Q 012225 193 DGVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLL-VETEGHYTSQQNYTSFEIHV 271 (468)
Q Consensus 193 ~~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~V-ia~DG~~~~p~~~d~i~l~p 271 (468)
..+++||+.. .|+|++++|+++++|+.|.... .+.+|+||....- .+.||.+. +....|.|
T Consensus 23 ~~~~~ng~~p-------------GP~i~~~~Gd~v~v~~~N~l~~-~~siH~HG~~~~~~~~~DG~p~----~t~~~i~P 84 (318)
T 3g5w_A 23 HTFAFNGQVP-------------APLIHVMEGDDVTVNVTNMTTL-PHTIHWHGMLQRGTWQSDGVPH----ATQHAIEP 84 (318)
T ss_dssp EEEEETTBSS-------------CCEEEEETTCEEEEEEEECSSS-CBCCEEETCCCTTCGGGSCCBT----TTBCCBCT
T ss_pred EEEEECCccC-------------CceEEEeCCCEEEEEEEeCCCC-ceeEEecCcCCCCCcccCCCcc----cccccCCC
Confidence 5799999874 4899999999999999998765 6899999986542 36788653 23467899
Q ss_pred CceEEEEEEecCCCCcceEEEEEec
Q 012225 272 GQSYSFLVTMDQNASSDYYIVASAR 296 (468)
Q Consensus 272 GqR~dv~v~~~~~~g~~y~i~~~~~ 296 (468)
|++++..++++ .+| +||.+.+..
T Consensus 85 G~~~~y~f~~~-~~G-t~wYH~H~~ 107 (318)
T 3g5w_A 85 GDTFTYKFKAE-PAG-TMWYHCHVN 107 (318)
T ss_dssp TCEEEEEEECC-SCE-EEEEECCSS
T ss_pred CCEEEEEEEcC-CCE-EEEEEccCC
Confidence 99999999998 467 999988754
No 51
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=99.44 E-value=1.5e-13 Score=133.52 Aligned_cols=83 Identities=17% Similarity=0.201 Sum_probs=68.4
Q ss_pred CceEEEcCcCCCCCCCccCCCCCcceEEEEcCCCEEEEEEEEcCCCCeeeEEEeCCeeEEEEeeCccccceeeceEEEcC
Q 012225 192 PDGVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYTSQQNYTSFEIHV 271 (468)
Q Consensus 192 ~~~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~Via~DG~~~~p~~~d~i~l~p 271 (468)
...+++||+.. .|+|++++|+++++|+.|.... .+.+|+||.. ..+.||.+. .+...|.|
T Consensus 54 ~~~~~~ng~~p-------------gP~i~~~~Gd~v~v~~~N~~~~-~~~iH~HG~~--~~~~DG~p~----~~~~~i~P 113 (288)
T 3gdc_A 54 FKGWSYNGRIP-------------GPTLWAREGDALRIHFTNAGAH-PHTIHFHGVH--RATMDGTPG----IGAGSIAP 113 (288)
T ss_dssp EEEEEETTBSS-------------CCEEEEETTCEEEEEEEECSSS-CBCCEESSCC--CGGGSCCTT----STTCSBCT
T ss_pred EEEEEECCccC-------------CCcEEEeCCCEEEEEEEeCCCC-cccEEecccc--ccccCCCCC----ccceeECC
Confidence 35899999875 3899999999999999999876 6899999975 346788753 24467899
Q ss_pred CceEEEEEEecCCCCcceEEEEEec
Q 012225 272 GQSYSFLVTMDQNASSDYYIVASAR 296 (468)
Q Consensus 272 GqR~dv~v~~~~~~g~~y~i~~~~~ 296 (468)
|++++..++++ ++| .||...+..
T Consensus 114 G~~~~y~f~~~-~~G-t~~yH~H~~ 136 (288)
T 3gdc_A 114 GQSFTYEFDAT-PFG-THLYHCHQS 136 (288)
T ss_dssp TCEEEEEEECC-SCE-EEEEECCCS
T ss_pred CCEEEEEEEcC-CCc-cEEEEecCc
Confidence 99999999996 578 999988764
No 52
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=99.41 E-value=9.7e-12 Score=131.58 Aligned_cols=217 Identities=12% Similarity=0.084 Sum_probs=138.3
Q ss_pred eEEEecCCEEEEEEEeCCC-CCceeecCcccCCCCCCCCCCCC-----CCCCcCCCCceEEEEEe-CCCceeeEEeeCcc
Q 012225 62 VLNATTNNNIVINVQNDLD-ESLLMTWPGIQMRRNSWQDGVQG-----TNCPIPSQWNWTYQFQV-KDQIGSFFYFPSLN 134 (468)
Q Consensus 62 ~i~~~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~~~DGv~~-----tq~~I~PG~~~~y~f~~-~~~~Gt~wyH~H~~ 134 (468)
+|+|++|+++++||.|... ....+|++|..... ...||.+. ....|.|||+++..+++ .+.+|.||.+++..
T Consensus 205 ~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~v-i~~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~ 283 (552)
T 1aoz_A 205 IFHVSPKKTYRIRIASTTALAALNFAIGNHQLLV-VEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTR 283 (552)
T ss_dssp CEEECTTCEEEEEEEECCSSCEEEEEETTCCEEE-EEETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEE
T ss_pred EEEEcCCCEEEEEEEcccccceEEEEEcCcEEEE-EEECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEcc
Confidence 7999999999999999975 45678999986543 45899742 34569999999999999 44589999999854
Q ss_pred ccccCCe--eecEEEecCCC--CCC---C-CCC--------------------------CCCcEEEEEeeeeecchHHHH
Q 012225 135 LQRVSGG--FGPVIINNRKV--IPI---P-FDQ--------------------------PEGDIIFLIGDWYTRNHTALR 180 (468)
Q Consensus 135 ~q~~~Gl--~G~liV~~~~~--~~~---~-~~~--------------------------~~~e~~l~l~d~~~~~~~~~~ 180 (468)
....... .+.|-.+.... .+. + .+. .++.+.+.++.-
T Consensus 284 ~~~~~~~~~~ail~y~~~~~~~~p~~~~p~~p~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~--------- 354 (552)
T 1aoz_A 284 ARHPNTPPGLTLLNYLPNSVSKLPTSPPPQTPAWDDFDRSKNFTYRITAAMGSPKPPVKFNRRIFLLNTQN--------- 354 (552)
T ss_dssp SSCCCSCCEEEEEEETTSCTTSCCSSCCCCCCCTTCHHHHHHHHTTCCBCTTCCCCCSSCSEEEEEEEEEE---------
T ss_pred cCCCCCccEEEEEEECCCCCCCCCCCCCCCCCccccccccccccccccccCCCCCCCCCCcEEEEEEEeec---------
Confidence 2101112 22232322211 000 0 000 001111111000
Q ss_pred HHhhcCCCCCCCceEEEcCcCCCCCCCc----------------cC------------CC-----CCcceEEEEcCCCEE
Q 012225 181 TALDSGKDLDMPDGVLINGKGPYRYNTT----------------LV------------PD-----GIEYETINVDPGKTY 227 (468)
Q Consensus 181 ~~~~~g~~~~~~~~~liNG~~~~~~~~~----------------~~------------~~-----~~~~~~~~v~~G~~~ 227 (468)
.......+.|||+.+...... .. .. ......+.++.|+++
T Consensus 355 -------~~~~~~~w~iNg~s~~~p~~P~L~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~g~~v 427 (552)
T 1aoz_A 355 -------VINGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEVV 427 (552)
T ss_dssp -------EETTEEEEEETTEEECCCSSCHHHHHHTTCTTSSCCSCCCSCCCTTCCTTSCCCCTTCEEECCCEEECTTCEE
T ss_pred -------cCCCeEEEEECCCccCCCCCCHHHHHhhcCccccccCCCccccccccccccccccccccccceEEEecCCCEE
Confidence 000012477888764211000 00 00 001245899999999
Q ss_pred EEEEEEcCC-----CCeeeEEEeCCeeEEEEe-eCcc----------ccceeeceEEEcCCceEEEEEEecCCCCcceEE
Q 012225 228 RVRVHNVGT-----STSLNFRIQNHNLLLVET-EGHY----------TSQQNYTSFEIHVGQSYSFLVTMDQNASSDYYI 291 (468)
Q Consensus 228 rlRliN~~~-----~~~~~~~i~gh~~~Via~-DG~~----------~~p~~~d~i~l~pGqR~dv~v~~~~~~g~~y~i 291 (468)
+|.|.|.+. ...|.||+|||.|.|++. +|.+ ..|...|++.+.+|+.+.+.+++++ +| .|.+
T Consensus 428 ~ivi~N~~~~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~n~~~p~~RDTv~vpp~g~v~Irf~aDN-PG-~W~~ 505 (552)
T 1aoz_A 428 DVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADN-PG-VWAF 505 (552)
T ss_dssp EEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEESSCCGGGGGGSCCSSCCEESEEEECTTEEEEEEEECCS-CE-EEEE
T ss_pred EEEEeCCcccccccCCCCCEEEcCCceEEEecccCccCcccccccccCCCCccCeEEeCCCceEEEEEEcCC-Ce-EEEE
Confidence 999999875 346999999999999998 4653 2467899999999999999999985 67 6777
Q ss_pred EEEecc
Q 012225 292 VASARF 297 (468)
Q Consensus 292 ~~~~~~ 297 (468)
+.+...
T Consensus 506 HCHi~~ 511 (552)
T 1aoz_A 506 HCHIEP 511 (552)
T ss_dssp EESSHH
T ss_pred Eeeehh
Confidence 777654
No 53
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=99.41 E-value=2.1e-11 Score=126.84 Aligned_cols=244 Identities=11% Similarity=0.091 Sum_probs=150.5
Q ss_pred EEEEEEcCcC---------CCceEEEecCCEEEEEEEeCCC-CCceeecCcccCCCCCCCCCCCC-----CCCCcCCCCc
Q 012225 49 QQVIAINGKF---------PGAVLNATTNNNIVINVQNDLD-ESLLMTWPGIQMRRNSWQDGVQG-----TNCPIPSQWN 113 (468)
Q Consensus 49 ~~~~~~Ng~~---------PgP~i~~~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~~~DGv~~-----tq~~I~PG~~ 113 (468)
...++|||+- +-|.|+|++|+++++|+.|... ....+|++|..... ...||.+. ....|.|||+
T Consensus 168 ~d~~liNG~g~~~~~~~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~v-ia~DG~~~~P~~~~~l~i~pGqR 246 (495)
T 3t6v_A 168 ADSTLIDGLGRTHVNVAAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTI-IETDGVDSQELTVDEIQIFAAQR 246 (495)
T ss_dssp CSEEEETTBCCBSSSCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEE-EEETTEEEEEEEESBEEECTTCE
T ss_pred CcEEEECCcCcCCCCcccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEE-EEeCCcccCCEEeeeEEEcCceE
Confidence 4689999972 3479999999999999999875 56788999986543 46899852 3356999999
Q ss_pred eEEEEEeCCCceeeEEeeCcc--c-cccCCeeecEEEecCCCCCCCCCCCCC-cEEEEEeeeeecchHH-----------
Q 012225 114 WTYQFQVKDQIGSFFYFPSLN--L-QRVSGGFGPVIINNRKVIPIPFDQPEG-DIIFLIGDWYTRNHTA----------- 178 (468)
Q Consensus 114 ~~y~f~~~~~~Gt~wyH~H~~--~-q~~~Gl~G~liV~~~~~~~~~~~~~~~-e~~l~l~d~~~~~~~~----------- 178 (468)
++..+++.+.+|.||.++... . ....|...+++.........|...... ... .+.+........
T Consensus 247 ~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~~~-~~~~~~L~p~~~~~~p~~~~~~~ 325 (495)
T 3t6v_A 247 YSFVLNANQPVGNYWIRANPNSGGEGFDGGINSAILRYDGATTADPVTVASTVHTK-CLIETDLHPLSRNGVPGNPHQGG 325 (495)
T ss_dssp EEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCCCSSCSS-BCCGGGCCBSSCCCCSSCSSTTC
T ss_pred EEEEEECCCCCceEEEEEecccCccccCCCceEEEEEECCCCCCCCCCCCCCCCcc-ccccccccccccccCCCccCCCC
Confidence 999999964569999998642 1 122233234443322111111100000 000 000100000000
Q ss_pred HHHHhhcCCCCCCCceEEEcCcCCCCCCCc-----cCC------CCCcceEEEEcCCCEEEEEEEEcCCCCeeeEEEeCC
Q 012225 179 LRTALDSGKDLDMPDGVLINGKGPYRYNTT-----LVP------DGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNH 247 (468)
Q Consensus 179 ~~~~~~~g~~~~~~~~~liNG~~~~~~~~~-----~~~------~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh 247 (468)
....+..... .....|.|||+.+..-..- ..+ ......++.++.|++++|.|.|......|.||+|||
T Consensus 326 ~d~~~~l~~~-~~~~~w~iNg~s~~~~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~n~~~~~HP~HLHGh 404 (495)
T 3t6v_A 326 ADCNLNLSLG-FACGNFVINGVSFTPPTVPVLLQICSGANTAADLLPSGSVISLPSNSTIEIALPAGAAGGPHPFHLHGH 404 (495)
T ss_dssp SSEEEECCEE-EETTEEEETTBCCCCCSSCHHHHHHTTCCSSTTSSSTTSEEEECTTCEEEEEEECCSSSCCCEEEETTC
T ss_pred CcEEEEEEEE-ecCcEEEEcCEecCCCCCcchhhhhcCCcCcccccCCcceEEecCCCEEEEEEccCCCCCCcceeecCC
Confidence 0000000000 0012688999886421100 000 011235789999999999998433344799999999
Q ss_pred eeEEEEeeCccc----cceeeceEEEcC-CceEEEEEEecCCCCcceEEEEEecc
Q 012225 248 NLLLVETEGHYT----SQQNYTSFEIHV-GQSYSFLVTMDQNASSDYYIVASARF 297 (468)
Q Consensus 248 ~~~Via~DG~~~----~p~~~d~i~l~p-GqR~dv~v~~~~~~g~~y~i~~~~~~ 297 (468)
.|.|++.+|... .|...|++.+.+ |+.+.+.+++++ +| .|.++.+...
T Consensus 405 ~F~vl~~~g~~~~n~~~P~~rDtv~v~~~g~~~~irf~adn-PG-~W~~HCHi~~ 457 (495)
T 3t6v_A 405 DFAVSESASNSTSNYDDPIWRDVVSIGGVGDNVTIRFCTDN-PG-PWFLHCHIDW 457 (495)
T ss_dssp CEEEEECTTCCCCCSSSCCEESEEECCSTTCEEEEEEECCS-CE-EEEEEESCHH
T ss_pred cEEEEecCCCCCcccCCCCCccEEEcCCCCcEEEEEEEcCC-Ce-eEEEEecchh
Confidence 999999988643 578899999997 999999999995 57 6777877653
No 54
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.40 E-value=6.3e-13 Score=139.30 Aligned_cols=95 Identities=17% Similarity=0.222 Sum_probs=74.7
Q ss_pred CCceEEEEEEcCcCCCceEEEecCCEEEEEEEeCCCCCceeecCcccCCCCCCCCCCCCCCCCcCCCCceEEEEEeCCCc
Q 012225 45 LGVPQQVIAINGKFPGAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQGTNCPIPSQWNWTYQFQVKDQI 124 (468)
Q Consensus 45 dG~~~~~~~~Ng~~PgP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~y~f~~~~~~ 124 (468)
+++...+|++|++||+|+|++++||+|+++++|.....-. +||+.... .|+ +..|.||++++|.|++ +++
T Consensus 497 ~~v~V~m~~~n~~f~pp~I~V~~Gd~V~~~ltN~d~~~Dv--~Hgf~ip~----~gv---~~~i~PG~t~t~~Fta-~~p 566 (595)
T 1fwx_A 497 NKVRVYMSSVAPSFSIESFTVKEGDEVTVIVTNLDEIDDL--THGFTMGN----YGV---AMEIGPQMTSSVTFVA-ANP 566 (595)
T ss_dssp TEEEEEEEEETTEESCSEEEEETTCEEEEEEEECCCSTTC--CEEEEETT----TTE---EEEECTTCEEEEEEEC-CSC
T ss_pred CccceeEEEecCcccCCEEEEECCCEEEEEEEeCCCCCCc--eeeEEecC----CCc---ceeeCCCCeEEEEEEC-CCC
Confidence 5677889999999999999999999999999998653111 35554321 222 3678999999999999 689
Q ss_pred eeeEEeeCc---cccccCCeeecEEEecCC
Q 012225 125 GSFFYFPSL---NLQRVSGGFGPVIINNRK 151 (468)
Q Consensus 125 Gt~wyH~H~---~~q~~~Gl~G~liV~~~~ 151 (468)
|+||||||. ..| .||+|.|+|++++
T Consensus 567 GtY~yhC~e~Cg~~H--~gM~G~IiV~p~~ 594 (595)
T 1fwx_A 567 GVYWYYCQWFCHALH--MEMRGRMLVEPKE 594 (595)
T ss_dssp EEEEEECCSCCSTTC--TTCEEEEEEECC-
T ss_pred EEEEEECCCCCCCCc--cCCEEEEEEEcCC
Confidence 999999993 233 3999999999854
No 55
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=99.38 E-value=3.1e-11 Score=127.00 Aligned_cols=231 Identities=11% Similarity=0.136 Sum_probs=148.4
Q ss_pred EEEEEEcCcCCCceEEEecCCEEEEEEEeCCC-CCceeecCcccCCCCCCCCCCCC-----CCCCcCCCCceEEEEEeCC
Q 012225 49 QQVIAINGKFPGAVLNATTNNNIVINVQNDLD-ESLLMTWPGIQMRRNSWQDGVQG-----TNCPIPSQWNWTYQFQVKD 122 (468)
Q Consensus 49 ~~~~~~Ng~~PgP~i~~~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~~~DGv~~-----tq~~I~PG~~~~y~f~~~~ 122 (468)
...++|||+. .|+|+|++|+++++||.|... ....+|++|..... ...||.+. ....|.|||+++..+++.+
T Consensus 167 ~d~~liNG~~-~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~v-i~~DG~~~~P~~~~~l~l~~gqR~dvlv~~~~ 244 (534)
T 1zpu_A 167 PQNLIVNNTM-NLTWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTV-VEIDGITTEKNVTDMLYITVAQRYTVLVHTKN 244 (534)
T ss_dssp CSEEEETTBS-SCEEECCSSCEEEEEEEECCSSCCEEEEETTBCEEE-EEETTEEEEEEEESCEEECTTCEEEEEEECCS
T ss_pred CceEEECCCC-ceEEEEECCCEEEEEEEeccCCceEEEEEcCCeeEE-EeccCcCccccEeceEEECccceEEEEEEcCC
Confidence 3678999996 699999999999999999986 46778888876543 46899752 3456899999999999953
Q ss_pred C-ceeeEEeeCccccccC------CeeecEEEecCCC--CCCCC--C---C----------------CCCcEEEEEeeee
Q 012225 123 Q-IGSFFYFPSLNLQRVS------GGFGPVIINNRKV--IPIPF--D---Q----------------PEGDIIFLIGDWY 172 (468)
Q Consensus 123 ~-~Gt~wyH~H~~~q~~~------Gl~G~liV~~~~~--~~~~~--~---~----------------~~~e~~l~l~d~~ 172 (468)
+ .|.||.+........+ ...+..|++-... .+.+. . . ...+..+.|.--
T Consensus 245 ~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~p~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~l~~~- 323 (534)
T 1zpu_A 245 DTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAALPTQNYVDSIDNFLDDFYLQPYEKEAIYGEPDHVITVDVV- 323 (534)
T ss_dssp CSSCCEEEEEEECGGGSSSCCTTCCCEEEEEEESCTTSCBCCCCCCSCSSCSCCGGGCCBSSCCCCCCSCSEEEEEEEE-
T ss_pred CCCCcEEEEEeccccccccCCCCCCcceEEEEEeCCCCCCCCCCcccccccccccccceeCCCCCCCCCCCeEEEEEEE-
Confidence 3 5799998764321100 1112223321111 11110 0 0 000011111000
Q ss_pred ecchHHHHHHhhcCCCCCCCceEEEcCcCCCCCCCc-----c-------CCC--CCcceEEEEcCCCEEEEEEEEcCCCC
Q 012225 173 TRNHTALRTALDSGKDLDMPDGVLINGKGPYRYNTT-----L-------VPD--GIEYETINVDPGKTYRVRVHNVGTST 238 (468)
Q Consensus 173 ~~~~~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~-----~-------~~~--~~~~~~~~v~~G~~~rlRliN~~~~~ 238 (468)
+... ......++|||+.+...... . .+. ......+.++.|++++|.|.|.+..
T Consensus 324 ----------~~~~--~~~~~~~~iNg~s~~~~~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~ivi~N~~~~- 390 (534)
T 1zpu_A 324 ----------MDNL--KNGVNYAFFNNITYTAPKVPTLMTVLSSGDQANNSEIYGSNTHTFILEKDEIVEIVLNNQDTG- 390 (534)
T ss_dssp ----------EEEC--TTSCEEEEETTBCCCCCSSCHHHHHTTSGGGTTCGGGGCSSSCEEEECTTCEEEEEEEECSSS-
T ss_pred ----------eecc--CCceeEEEECCCcccCCCCCceeeecccCcccCCCcccCCCceEEEeCCCCEEEEEEeCCCCC-
Confidence 0000 01123678999886321000 0 000 0013468999999999999998765
Q ss_pred eeeEEEeCCeeEEEEeeCc-----------c---------ccceeeceEEEcCCceEEEEEEecCCCCcceEEEEEecc
Q 012225 239 SLNFRIQNHNLLLVETEGH-----------Y---------TSQQNYTSFEIHVGQSYSFLVTMDQNASSDYYIVASARF 297 (468)
Q Consensus 239 ~~~~~i~gh~~~Via~DG~-----------~---------~~p~~~d~i~l~pGqR~dv~v~~~~~~g~~y~i~~~~~~ 297 (468)
.|.||+|||.|.|++.++. + ..|...|++.+.||+.+.+.+++++ +| .|.++.+...
T Consensus 391 ~HP~HLHGh~F~Vl~~~~~~~~~~~G~p~~~~~~~~~~~~~~p~~RDTv~V~pgg~v~IrF~aDN-PG-~W~~HCHi~~ 467 (534)
T 1zpu_A 391 THPFHLHGHAFQTIQRDRTYDDALGEVPHSFDPDNHPAFPEYPMRRDTLYVRPQSNFVIRFKADN-PG-VWFFHCHIEW 467 (534)
T ss_dssp CEEEEETTCCEEEEEECCCCCGGGTCCCCCCBTTBCCCCCSSCEEESEEEECTTCEEEEEEECCS-CE-EEEEEECCHH
T ss_pred CCCeEecCCceEEEeecCCccccccCcccccCccccccccCCCCeeeEEEeCCCCEEEEEEEeCC-Ce-eEEEEeCchh
Confidence 6999999999999998853 1 2367789999999999999999985 67 7778887654
No 56
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=99.36 E-value=1.6e-11 Score=127.10 Aligned_cols=248 Identities=15% Similarity=0.107 Sum_probs=154.2
Q ss_pred EEEEEEEEEEEECCCCc--------------eEEEEEEcCcCCCceEEEecCCEEEEEEEeCCC-CCceeec-CcccCCC
Q 012225 31 IFYDFKVSYITASPLGV--------------PQQVIAINGKFPGAVLNATTNNNIVINVQNDLD-ESLLMTW-PGIQMRR 94 (468)
Q Consensus 31 ~~~~l~~~~~~~~~dG~--------------~~~~~~~Ng~~PgP~i~~~~Gd~v~v~v~N~l~-~~~siH~-HG~~~~~ 94 (468)
.++.|.++.-....+|. ....++|||+. .|.+.+ +|+++++|+.|... ....+++ +|.....
T Consensus 151 ~d~~lvl~D~~~~~~g~~~~~~~~~~~~~g~~gd~~lvNG~~-~p~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~v 228 (488)
T 3od3_A 151 DDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAI-YPQHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLYV 228 (488)
T ss_dssp TEEEEEEEEECBCTTSSBCCCCSHHHHHHCCCCSEEEETTBS-SCEEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEEE
T ss_pred cceeEEEEEeeecCCCceeccccccccccCCCCCEEEEcCCc-CccEec-CCCEEEEEEEccCCCceeeeeecCCCeEEE
Confidence 46677777655544442 23679999996 588876 67899999999975 4567887 6765432
Q ss_pred CCCCCCC----CC--CCCCcCCCCceEEEEEeCCCceeeEEeeCccccccCCee-----e---cEEEec-----CCCCCC
Q 012225 95 NSWQDGV----QG--TNCPIPSQWNWTYQFQVKDQIGSFFYFPSLNLQRVSGGF-----G---PVIINN-----RKVIPI 155 (468)
Q Consensus 95 ~~~~DGv----~~--tq~~I~PG~~~~y~f~~~~~~Gt~wyH~H~~~q~~~Gl~-----G---~liV~~-----~~~~~~ 155 (468)
...||. |. ....|.|||+++..+++. +.+.|+.-+..... .|+. . .+-|.+ ....+.
T Consensus 229 -Ia~DG~~l~~P~~~~~l~l~pGeR~dvlv~~~-~~~~~~l~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 304 (488)
T 3od3_A 229 -IASDGGLLPEPVKVSELPVLMGERFEVLVEVN-DNKPFDLVTLPVSQ--MGMAIAPFDKPHPVMRIQPIAISASGALPD 304 (488)
T ss_dssp -EEETTEEEEEEEEESCEEECTTCEEEEEEEEC-TTCCEEEEECCCSS--TTTTSTTTTSCEEEEEEEEEEEECCCCCCS
T ss_pred -EEeCCCcccCccEeceEEECCCCEEEEEEEeC-CCceEEEEEeccCC--CCcccccccCccceeEecccccCCCCCCCc
Confidence 568985 32 446699999999999995 57788776542211 1110 0 122222 111110
Q ss_pred -----CC-CC----CCCcEEEEEeeee-ecchHHHHHHh----hcC-----------CC-C---------CCCceEEEcC
Q 012225 156 -----PF-DQ----PEGDIIFLIGDWY-TRNHTALRTAL----DSG-----------KD-L---------DMPDGVLING 199 (468)
Q Consensus 156 -----~~-~~----~~~e~~l~l~d~~-~~~~~~~~~~~----~~g-----------~~-~---------~~~~~~liNG 199 (468)
+. +. ..+++.+.+.... ......+.+.. ..+ .. . .....++|||
T Consensus 305 ~L~~~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~ING 384 (488)
T 3od3_A 305 TLSSLPALPSLEGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMNHGGKFDFHHANKING 384 (488)
T ss_dssp CCCCCCCCCCCTTCCEEEEEEEECHHHHHHHHHHHHHHHGGGGGTTSCHHHHCCCSCCCCCCCSCCCGGGCGGGCEEETT
T ss_pred ccccCCCCcccccccceEEEEEecccccccccccccccccccccccccccccccccccCccccccccccccccceeeECC
Confidence 10 11 1123344332100 00000010000 000 00 0 0012479999
Q ss_pred cCCCCCCCccCCCCCcceEEEEcCCCEEEEEEEEcCCCCeeeEEEeCCeeEEEEeeCccccc---eeeceEEEcCCceEE
Q 012225 200 KGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYTSQ---QNYTSFEIHVGQSYS 276 (468)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~Via~DG~~~~p---~~~d~i~l~pGqR~d 276 (468)
+.+.. ..+.++++.|+++||+|+|.+....|.||||||.|+|++.||....+ ..+|++.|. |++..
T Consensus 385 ~~~~~----------~~~~~~~~~G~~e~w~l~N~~~~~~Hp~HlHg~~F~Vl~~~g~~~~~~~~~~kDTV~v~-g~~~~ 453 (488)
T 3od3_A 385 QAFDM----------NKPMFAAAKGQYERWVISGVGDMMLHPFHIHGTQFRILSENGKPPAAHRAGWKDTVKVE-GNVSE 453 (488)
T ss_dssp BCCCT----------TCCSEECCBSSCEEEEEECTTCCCCEEEEETTCCBEEEEBTTBCCCGGGSSSBSEEEES-SSEEE
T ss_pred eeCCC----------CCCceEcCCCCEEEEEEEeCCCCCCccEEEcCceEEEeccCCCccccccCCceeEEEeC-CCEEE
Confidence 99721 23568999999999999999865579999999999999999987653 368999999 99999
Q ss_pred EEEEecCCC---CcceEEEEEec
Q 012225 277 FLVTMDQNA---SSDYYIVASAR 296 (468)
Q Consensus 277 v~v~~~~~~---g~~y~i~~~~~ 296 (468)
++++++++. | .|-++.+..
T Consensus 454 i~~~f~~~~~~~G-~~m~HCH~l 475 (488)
T 3od3_A 454 VLVKFNHDAPKEH-AYMAHCHLL 475 (488)
T ss_dssp EEECBCSCCCGGG-CEEEEESSH
T ss_pred EEEEeccCCCCCC-CEEEeCCch
Confidence 999997543 4 677776643
No 57
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=99.35 E-value=3.3e-11 Score=125.46 Aligned_cols=244 Identities=10% Similarity=0.094 Sum_probs=149.0
Q ss_pred EEEEEEcCcC--------CCceEEEecCCEEEEEEEeCCC-CCceeecCcccCCCCCCCCCCCC-----CCCCcCCCCce
Q 012225 49 QQVIAINGKF--------PGAVLNATTNNNIVINVQNDLD-ESLLMTWPGIQMRRNSWQDGVQG-----TNCPIPSQWNW 114 (468)
Q Consensus 49 ~~~~~~Ng~~--------PgP~i~~~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~~~DGv~~-----tq~~I~PG~~~ 114 (468)
...++|||+- +-|.|+|++|+++++|+.|... ....+|++|..... ...||.+. ....|.|||++
T Consensus 166 ~d~~liNG~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~v-ia~DG~~~~P~~~~~l~i~pGqR~ 244 (499)
T 3pxl_A 166 ADATLINGKGRAPSDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTI-IEVDSVNSQPLEVDSIQIFAAQRY 244 (499)
T ss_dssp CSEEEETTBCCCTTCTTCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEE-EEETTEEEEEEEESBEEECTTCEE
T ss_pred CcEEEECCCCcCCCCCCCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEE-EEECCcccCceEeeeEEECCCcEE
Confidence 4689999973 3479999999999999999875 56789999987543 46899852 33559999999
Q ss_pred EEEEEeCCCceeeEEeeCcc--cc-ccCCeeecEEEecCCCCCCCCCCCCCcEEEEEeeeeecchH-----------HHH
Q 012225 115 TYQFQVKDQIGSFFYFPSLN--LQ-RVSGGFGPVIINNRKVIPIPFDQPEGDIIFLIGDWYTRNHT-----------ALR 180 (468)
Q Consensus 115 ~y~f~~~~~~Gt~wyH~H~~--~q-~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~-----------~~~ 180 (468)
+..+++.+.+|.||..+... .+ ...|..-+++.........|........ ..+.+....... ...
T Consensus 245 dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~-~~~~~~~L~p~~~~~~p~~~~~~~~d 323 (499)
T 3pxl_A 245 SFVLDANQAVDNYWIRANPNFGNVGFDGGINSAILRYDGAPAVEPTTNQTTSV-KPLNEVDLHPLVSTPVPGAPSSGGVD 323 (499)
T ss_dssp EEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCCCCCS-SBCCGGGCCBSSCCCCSSCSSTTCSS
T ss_pred EEEEECCCCCceEEEEEecccCccccCCCceEEEEEeCCCCCCCCCCCCCCCC-cccccccccccccccCCCcccCCCCc
Confidence 99999965569999998632 11 1112212333332211111110000000 000010000000 000
Q ss_pred HHhhcCCCCCCCceEEEcCcCCCCCCCc-----cCC------CCCcceEEEEcCCCEEEEEEEEc--CCCCeeeEEEeCC
Q 012225 181 TALDSGKDLDMPDGVLINGKGPYRYNTT-----LVP------DGIEYETINVDPGKTYRVRVHNV--GTSTSLNFRIQNH 247 (468)
Q Consensus 181 ~~~~~g~~~~~~~~~liNG~~~~~~~~~-----~~~------~~~~~~~~~v~~G~~~rlRliN~--~~~~~~~~~i~gh 247 (468)
..+..... .....|.|||+.+..-..- ..+ ......++.++.|++++|.|.|. .....|.||+|||
T Consensus 324 ~~~~l~~~-~~~~~w~iNg~s~~~~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~~~n~~~~~HP~HLHGh 402 (499)
T 3pxl_A 324 KAINMAFN-FNGSNFFINGASFVPPTVPVLLQILSGAQTAQDLLPSGSVYVLPSNASIEISFPATAAAPGAPHPFHLHGH 402 (499)
T ss_dssp EEEECCEE-ECSSCEEETTBCCCCCSSCHHHHHHTTCCSTTTSSSTTSEEEECTTCEEEEEEECCTTSCSCSCEEEETTC
T ss_pred EEEEEEEE-ecCcEEEEcCEecCCCCCchhhhhhcCCccccccCCCceeEEecCCCEEEEEEecCcccCCCCccceecCC
Confidence 00000000 0112688999886421100 000 01123678999999999999942 2234699999999
Q ss_pred eeEEEEeeCccc----cceeeceEEEcC---CceEEEEEEecCCCCcceEEEEEecc
Q 012225 248 NLLLVETEGHYT----SQQNYTSFEIHV---GQSYSFLVTMDQNASSDYYIVASARF 297 (468)
Q Consensus 248 ~~~Via~DG~~~----~p~~~d~i~l~p---GqR~dv~v~~~~~~g~~y~i~~~~~~ 297 (468)
.|.|++.+|... .|...|++.+.+ |+.+.+.+++++ || .|.++.+...
T Consensus 403 ~F~Vl~~~g~~~~n~~~P~~rDtv~v~~~~pg~~~~irf~adn-PG-~W~~HCHi~~ 457 (499)
T 3pxl_A 403 TFAVVRSAGSTVYNYDNPIFRDVVSTGTPAAGDNVTIRFDTNN-PG-PWFLHCHIDF 457 (499)
T ss_dssp CEEEEECTTCCCCCSSSCCEESEEECCCGGGTCEEEEEEECCS-CE-EEEEEESSHH
T ss_pred cEEEEeccCCcccccCCCCccceEEcCCcCCCcEEEEEEEcCC-Cc-eEEEEeCChh
Confidence 999999887543 588899999986 999999999995 67 6777777543
No 58
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=99.35 E-value=2.6e-11 Score=124.89 Aligned_cols=217 Identities=12% Similarity=0.040 Sum_probs=144.1
Q ss_pred EEEEEEEEEEEECC-------------CCceEEEEEEcCcCCCceEEEecCCEEEEEEEeCCC-CCceeec--Cc---cc
Q 012225 31 IFYDFKVSYITASP-------------LGVPQQVIAINGKFPGAVLNATTNNNIVINVQNDLD-ESLLMTW--PG---IQ 91 (468)
Q Consensus 31 ~~~~l~~~~~~~~~-------------dG~~~~~~~~Ng~~PgP~i~~~~Gd~v~v~v~N~l~-~~~siH~--HG---~~ 91 (468)
+++.|.++.-.... .|.....++|||+. .|+|+|++| ++++|+.|... ....+|+ +| ..
T Consensus 138 ~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~-~p~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~ 215 (448)
T 3aw5_A 138 NDLPLVISDRRFIGGAPVYNPTPMEMIAGFLGNAVLVNGVK-DAVFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVP 215 (448)
T ss_dssp TEEEEEEEEEEEETTEEECCCCHHHHHHCCCCSEEEETTEE-TCEEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEEC
T ss_pred ceEEEEEEeeccCCCcccccccccccccCccccEEEECCcc-cceEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCcc
Confidence 67777777654332 12234678999996 599999999 99999999986 5678999 87 54
Q ss_pred CCCCCCCCCCCC------CCCCcCCCCceEEEEEeCCCceeeEEeeCccccccCC---e----------eec--EEEecC
Q 012225 92 MRRNSWQDGVQG------TNCPIPSQWNWTYQFQVKDQIGSFFYFPSLNLQRVSG---G----------FGP--VIINNR 150 (468)
Q Consensus 92 ~~~~~~~DGv~~------tq~~I~PG~~~~y~f~~~~~~Gt~wyH~H~~~q~~~G---l----------~G~--liV~~~ 150 (468)
... ...||.+. ....|.|||+++..++++ .|.||..++.......+ + ... |.+...
T Consensus 216 ~~v-ia~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~--~~~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (448)
T 3aw5_A 216 MRL-IAVDQGFLARPIEVRALFLAPAERAEVVVELG--EGVYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGK 292 (448)
T ss_dssp EEE-EEETTEEEEEEEEESCEEECTTCEEEEEEEEC--SEEEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEE
T ss_pred EEE-EEeCCCccCCceEeceEEECCcceEEEEEECC--CCceEEEccccccccCccccccccccCCCCCceEEEEEEcCC
Confidence 332 46899742 335589999999999994 57899988743211000 1 111 222221
Q ss_pred CCCCCC--C---C----CCCCcEEEEEeeeeecchHHHHHHhhcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceEEE-
Q 012225 151 KVIPIP--F---D----QPEGDIIFLIGDWYTRNHTALRTALDSGKDLDMPDGVLINGKGPYRYNTTLVPDGIEYETIN- 220 (468)
Q Consensus 151 ~~~~~~--~---~----~~~~e~~l~l~d~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~- 220 (468)
...+.| . + ....+..+.|.. + ...|.|||+.+.. ..+.+.
T Consensus 293 ~~~~~p~~L~~lp~~~~~~~~~~~~~l~~---------------~-----~~~~~iNg~~~~~----------~~p~~~~ 342 (448)
T 3aw5_A 293 GEAVPVEALSDPPPEPPKPTRTRRFALSL---------------S-----GMQWTINGMFWNA----------SNPLFEH 342 (448)
T ss_dssp CCCCCCCCCSCCCCCCCCCSEEEEEEEEE---------------E-----TTEEEETTBCCCT----------TCTTCCC
T ss_pred CCCCCccccCCCCCCCCCCCceEEEEEeC---------------C-----CceeeECCCcCCC----------CCCceec
Confidence 110000 0 0 001111222210 0 1258999999731 124456
Q ss_pred EcCCCEEEEEEEEcCCCCeeeEEEeCCeeEEEEeeCccc------------cc---eeeceEEEcCCceEEEEEEec
Q 012225 221 VDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYT------------SQ---QNYTSFEIHVGQSYSFLVTMD 282 (468)
Q Consensus 221 v~~G~~~rlRliN~~~~~~~~~~i~gh~~~Via~DG~~~------------~p---~~~d~i~l~pGqR~dv~v~~~ 282 (468)
++.|++++|+|.|.+....|.||+|||.|+|++.+|... .| ...|++.+.||+++.+++++.
T Consensus 343 ~~~g~~v~~~i~N~~~~~~HP~HLHG~~F~Vl~~~G~~~~~~~~~~~~~~~~p~~~~~rDTv~v~pg~~~~i~vrF~ 419 (448)
T 3aw5_A 343 VSVEGVELWEIVNDKASMPHPMHLHGFPMWIIERKDSPRQVAELAVDNRGRLPTDLGLKDTVLIWPGETVKIVVNFD 419 (448)
T ss_dssp EEECEEEEEEEEECSSSCCEEEEESSSCBEEEEEESCCHHHHTTCCSTTCCCGGGGSCBSEEEECTTCEEEEEEEEC
T ss_pred cCCCCeEEEEEEcCCCCCCcCEEECCceEEEEEecCCCcccccccccccCCCccccCCccEEEeCCCCEEEEEEEec
Confidence 899999999999998334699999999999999999875 23 478999999999999997665
No 59
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=99.33 E-value=1.7e-10 Score=122.15 Aligned_cols=246 Identities=9% Similarity=0.030 Sum_probs=148.1
Q ss_pred EEEEEEcCcCC--------CceEEEecCCEEEEEEEeCCCC-CceeecCcccCCCCCCCCCCCC-----CCCCcCCCCce
Q 012225 49 QQVIAINGKFP--------GAVLNATTNNNIVINVQNDLDE-SLLMTWPGIQMRRNSWQDGVQG-----TNCPIPSQWNW 114 (468)
Q Consensus 49 ~~~~~~Ng~~P--------gP~i~~~~Gd~v~v~v~N~l~~-~~siH~HG~~~~~~~~~DGv~~-----tq~~I~PG~~~ 114 (468)
...++|||+.. -|.|++++|+++++||.|.... ...+|++|..... ...||.+. ....|.|||++
T Consensus 195 ~d~~liNG~~~~~~~~~g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~v-i~~DG~~~~p~~~~~l~l~pgeR~ 273 (559)
T 2q9o_A 195 SDNVLINGTAVNPNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTV-IAADMVPVNAMTVDSLFLAVGQRY 273 (559)
T ss_dssp BSEEEETTBCBCTTTCCBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEE-EEETTEEEEEEEESCEEECTTCEE
T ss_pred cceeEECCccccCcCCCCCceEEEEcCCCEEEEEEEecCCCceEEEEECCCceEE-EecCCcccCceEeCeEEEccEEEE
Confidence 35789999963 3699999999999999999864 5789999986543 45799852 34568999999
Q ss_pred EEEEEeCCCceeeEEeeCc--ccc---ccCCe-eecEEEecCCCC-CC--CCCCCCCcEE--EEEeeeeec--chH----
Q 012225 115 TYQFQVKDQIGSFFYFPSL--NLQ---RVSGG-FGPVIINNRKVI-PI--PFDQPEGDII--FLIGDWYTR--NHT---- 177 (468)
Q Consensus 115 ~y~f~~~~~~Gt~wyH~H~--~~q---~~~Gl-~G~liV~~~~~~-~~--~~~~~~~e~~--l~l~d~~~~--~~~---- 177 (468)
+..+++.+.+|.||..... ... ..... .+.|........ +. +....+.... ..+...... ...
T Consensus 274 dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~ail~y~~~~~~~P~~~~~~~~~~~~~~~~~l~p~~~~~~p~~~~~~ 353 (559)
T 2q9o_A 274 DVVIDASRAPDNYWFNVTFGGQAACGGSLNPHPAAIFHYAGAPGGLPTDEGTPPVDHQCLDTLDVRPVVPRSVPVNSFVK 353 (559)
T ss_dssp EEEEECCSCSSEEEEEEECCGGGTTCCBSSSCCEEEEEETTSCCSCCCCCCCCCCCCTTCCCSCCCBSSCCBCCCTTCCC
T ss_pred EEEEECCCCCCcEEEEEEeccccccCCCCCCceeEEEEECCCCCCCCCCCCCcCCCcccccccccccCCCCCCCCccccc
Confidence 9999996557999998765 211 11111 222222221110 10 0000000000 000000000 000
Q ss_pred --HHHHHhhcCCCCCCCceEEEcCcCCCCCCCcc------CCCC---CcceEEEEcCCCEEEEEEEEcCC----CCeeeE
Q 012225 178 --ALRTALDSGKDLDMPDGVLINGKGPYRYNTTL------VPDG---IEYETINVDPGKTYRVRVHNVGT----STSLNF 242 (468)
Q Consensus 178 --~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~------~~~~---~~~~~~~v~~G~~~rlRliN~~~----~~~~~~ 242 (468)
.+...+...........+.|||+.+....... .+.. .....+.++.++++++.++|... ...|.|
T Consensus 354 ~~~~~~~~~~~~~~~~~~~~~iNg~s~~~~~~~P~L~~~~~g~~~~~~~~~~~~~~~~~~v~~~vi~n~~~~~~~~~HP~ 433 (559)
T 2q9o_A 354 RPDNTLPVALDLTGTPLFVWKVNGSDINVDWGKPIIDYILTGNTSYPVSDNIVQVDAVDQWTYWLIENDPEGPFSLPHPM 433 (559)
T ss_dssp CGGGEEEEEEECSSSSSCEEEETTBCCCCCTTSCHHHHHHHTCCCCCGGGCEEEECCSSCEEEEEEEECTTSSCCCCEEE
T ss_pred ceeEEEEEEeecCCCceEEEEECCEecccCCCCCcHhHhhcCCccCCCCceEEEcCCCCEEEEEEEeCCCccccCCCCcE
Confidence 00000000000112246899999863211000 0000 11246888888888887777644 457999
Q ss_pred EEeCCeeEEEEeeC----------cc-----------ccceeeceEEEcCCceEEEEEEecCCCCcceEEEEEecc
Q 012225 243 RIQNHNLLLVETEG----------HY-----------TSQQNYTSFEIHVGQSYSFLVTMDQNASSDYYIVASARF 297 (468)
Q Consensus 243 ~i~gh~~~Via~DG----------~~-----------~~p~~~d~i~l~pGqR~dv~v~~~~~~g~~y~i~~~~~~ 297 (468)
|||||.|.|++.++ .+ ..|...|++.+.+|+++.+.+++++ +| .|.++.+...
T Consensus 434 HLHGh~F~Vl~~g~~~~~~~~~~g~~~~~~~~~~~n~~~p~~RDTV~Vp~~g~v~IrF~adN-PG-~W~~HCHil~ 507 (559)
T 2q9o_A 434 HLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTDN-PG-AWLFHCHIAW 507 (559)
T ss_dssp EESSSCEEEEEESCCCCTTSCCCCCCCHHHHGGGCCCBSCCEESEEEECTTSEEEEEEECCS-CE-EEEEEECCHH
T ss_pred EECCCceEEEecccccccccccccccCccccccccccCCCCccceEEccCCccEEEEEEcCC-Ce-eEEEEecchh
Confidence 99999999999986 22 1366789999999999999999885 67 7778887654
No 60
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=99.30 E-value=1.1e-10 Score=123.90 Aligned_cols=232 Identities=7% Similarity=-0.006 Sum_probs=145.0
Q ss_pred EEEEEEcCcCCCceEEEecCCEEEEEEEeCCC-CCceeecCcc-------cCCCCCCCCCCC----C--C------CCCc
Q 012225 49 QQVIAINGKFPGAVLNATTNNNIVINVQNDLD-ESLLMTWPGI-------QMRRNSWQDGVQ----G--T------NCPI 108 (468)
Q Consensus 49 ~~~~~~Ng~~PgP~i~~~~Gd~v~v~v~N~l~-~~~siH~HG~-------~~~~~~~~DGv~----~--t------q~~I 108 (468)
...++|||+. .|.+.|++| ++++||.|... ....+++.|. ... -...||.+ . . ...|
T Consensus 254 gd~~lVNG~~-~p~~~V~~g-~yRlRliNas~~r~~~l~i~~h~g~~~~~~~~-vIa~DG~~l~~P~~~~~~~~~~~l~l 330 (612)
T 2g23_A 254 GPYTTVNGRI-WPYADVDDG-WYRLRLVNASNARIYNLVLIDEDDRPVPGVVH-QIGSDGGLLPRPVPVDFDDTLPVLSA 330 (612)
T ss_dssp CSEEEETTEE-SCEEEEESS-EEEEEEEECCSSCCEEEEEECTTSCBCTTSEE-EEEETTEEEEEEEEECSSSSSSSEEE
T ss_pred CCEEEECCcc-CCeEEecCC-eEEEEEEecCCCeEEEEEEcCCCCccCCCcEE-EEEeCCeEccCCEEecccCcccEEEE
Confidence 3578999996 699999999 99999999976 5667888765 111 24579974 2 2 4568
Q ss_pred CCCCceEEEEEeCCCcee-eEEeeCcccccc----------CCeeecEEEecCCC-CC--CCC------CCCC-----Cc
Q 012225 109 PSQWNWTYQFQVKDQIGS-FFYFPSLNLQRV----------SGGFGPVIINNRKV-IP--IPF------DQPE-----GD 163 (468)
Q Consensus 109 ~PG~~~~y~f~~~~~~Gt-~wyH~H~~~q~~----------~Gl~G~liV~~~~~-~~--~~~------~~~~-----~e 163 (468)
.|||+++.-+++.+.+|+ ++...-...... .+..--|.|..+.. .. .|. .... ..
T Consensus 331 ~pgeR~dvlVd~~~~~g~~~~L~~~~~~~~~g~~~~~~~~~~~~vm~f~V~~~~~~~~~~~P~~L~~~~~~l~~~~~~~~ 410 (612)
T 2g23_A 331 APAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEVLSGSFRRMSHDIPHGH 410 (612)
T ss_dssp CTTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSSCCSSCCCCCTTSCCEE
T ss_pred CCcCeEEEEEECCCCCCCEEEEEeCCccCCCCccccccCccccceEEEEEccCCCCCCCCCChhhccccccCCcccccce
Confidence 999999999999654674 666544211110 01111245544321 11 111 0000 01
Q ss_pred EEEEEe------------eeeecchHHHHHHhh---cC-----CCCCCCceEEEcCcCCCCCCCccCCCCCcceEEEEcC
Q 012225 164 IIFLIG------------DWYTRNHTALRTALD---SG-----KDLDMPDGVLINGKGPYRYNTTLVPDGIEYETINVDP 223 (468)
Q Consensus 164 ~~l~l~------------d~~~~~~~~~~~~~~---~g-----~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~v~~ 223 (468)
..+++. -|....... ...+. .+ ........+.|||+.+. ..+.++++.
T Consensus 411 r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~iNG~~~~-----------~~~~~~v~~ 478 (612)
T 2g23_A 411 RLIVLTPPGTKGSGGHPEIWEMAEVED-PADVQVPAEGVIQVTGADGRTKTYRRTAATFN-----------DGLGFTIGE 478 (612)
T ss_dssp EEEEECCTTCTTSTTCCCEEEEEEEC------CCSCTTEEEEECTTSCEEEEEEEECSTT-----------SCCCEEEET
T ss_pred eEEeeccccccccccccceeecccccc-ccccccccccceeeeccCCceeEEEECCccCC-----------CCCceEecC
Confidence 122221 011100000 00000 00 00011235889999872 247799999
Q ss_pred CCEEEEEEEEcCCCCeeeEEEeCCeeEEEEeeCc------------------------cc---cceeeceEEEcCCceEE
Q 012225 224 GKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGH------------------------YT---SQQNYTSFEIHVGQSYS 276 (468)
Q Consensus 224 G~~~rlRliN~~~~~~~~~~i~gh~~~Via~DG~------------------------~~---~p~~~d~i~l~pGqR~d 276 (468)
|++++|+|+|.+.. .|.||||||.|+|++.+|. .. ++..+|++.+.||+++.
T Consensus 479 G~~v~w~l~N~~~~-~HPiHlHg~~F~Vl~r~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~e~~~kDTv~v~Pg~~~~ 557 (612)
T 2g23_A 479 GTHEQWTFLNLSPI-LHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLR 557 (612)
T ss_dssp TCEEEEEEEECSSS-CEEEEESSCCEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTSSSCBSEEEECSSEEEE
T ss_pred CCEEEEEEEeCCCC-CCCeEEcCceEEEecccCcccccccccccCcccccccccccccCCCcccccccCeEEECCCcEEE
Confidence 99999999999866 6999999999999987642 11 12368999999999999
Q ss_pred EEEEecCCCCcceEEEEEecc
Q 012225 277 FLVTMDQNASSDYYIVASARF 297 (468)
Q Consensus 277 v~v~~~~~~g~~y~i~~~~~~ 297 (468)
+.++++..+| .|-++.+...
T Consensus 558 i~~~~~~~pG-~w~~HCHil~ 577 (612)
T 2g23_A 558 VMGKFDGAYG-RFMYHCHLLE 577 (612)
T ss_dssp EEEECCSCCE-EEEEEESSHH
T ss_pred EEEEeCCCCc-cEEEEeCchh
Confidence 9999996678 8888887543
No 61
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=99.28 E-value=8.8e-12 Score=102.18 Aligned_cols=78 Identities=12% Similarity=0.122 Sum_probs=62.4
Q ss_pred cCcCCCceEEEecCCEEEEEEEeCCCCCceeecCcccCCCCCCCCCCCC-CCCCcCCCCceEEEEEeCCCceeeEEeeCc
Q 012225 55 NGKFPGAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQG-TNCPIPSQWNWTYQFQVKDQIGSFFYFPSL 133 (468)
Q Consensus 55 Ng~~PgP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~-tq~~I~PG~~~~y~f~~~~~~Gt~wyH~H~ 133 (468)
+..|..+.|++++||+|++ +|....+|++|+++- +||... .+..|.||++++|.| +++|+|||||+.
T Consensus 27 ~~~F~P~~i~v~~Gd~V~~--~N~d~~~H~v~~~~~-------~~g~~~~~~~~~~pG~~~~~tf---~~~G~y~y~C~~ 94 (105)
T 2ov0_A 27 KMKYETPELHVKVGDTVTW--INREAMPHNVHFVAG-------VLGEAALKGPMMKKEQAYSLTF---TEAGTYDYHCTP 94 (105)
T ss_dssp TTEESSSEEEECTTCEEEE--EECSSSCBCCEECTT-------TSSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSS
T ss_pred ecEEcCCEEEECCCCEEEE--EECCCCCEEEEEcCC-------CCCcccccccccCCCCEEEEEe---CCCEEEEEEeCC
Confidence 4556678999999999655 699888999999863 366654 556689999999888 379999999986
Q ss_pred cccccCCeeecEEEe
Q 012225 134 NLQRVSGGFGPVIIN 148 (468)
Q Consensus 134 ~~q~~~Gl~G~liV~ 148 (468)
.. ||.|.|+|+
T Consensus 95 H~----gM~G~i~V~ 105 (105)
T 2ov0_A 95 HP----FMRGKVVVE 105 (105)
T ss_dssp CT----TCEEEEEEC
T ss_pred CC----CCEEEEEEC
Confidence 32 899999985
No 62
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=99.25 E-value=4.9e-13 Score=131.03 Aligned_cols=98 Identities=13% Similarity=0.111 Sum_probs=67.3
Q ss_pred EEEEEEcCcCCC--ceEEEecCCEEEEEEEeCCCC--CceeecCcccCCCCCCCCCCCCCCCCcCCCCceEEEEEeCCCc
Q 012225 49 QQVIAINGKFPG--AVLNATTNNNIVINVQNDLDE--SLLMTWPGIQMRRNSWQDGVQGTNCPIPSQWNWTYQFQVKDQI 124 (468)
Q Consensus 49 ~~~~~~Ng~~Pg--P~i~~~~Gd~v~v~v~N~l~~--~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~y~f~~~~~~ 124 (468)
..+++|||+..+ |.|++++|++++++|.|.... .+++|+||.... .||.......|.||+++++.|++ +++
T Consensus 201 ~~~~~ING~~~~~~p~l~v~~G~~vrlrliN~g~~~~~h~~hlhG~~~~----~dG~~~dtv~l~pger~~v~~~~-~~p 275 (306)
T 1sdd_A 201 SLMYTVNGYVNGTMPDITVCAHDHISWHLIGMSSGPELFSIHFNGQVLE----QNHHKISAITLVSATSTTANMTV-SPE 275 (306)
T ss_dssp CEEECSSSCCSSCCCCCCCCCC------BBCCCSSSCEECCBCSSTTCE----ETTEECSCCCEETTCCBC---------
T ss_pred CcceeeCCEecCCCcceEEcCCCEEEEEEEeCCCCCccEEEEECCcEee----eCCEEcceEEECCCcEEEEEEEc-CCC
Confidence 468999999864 899999999999999999864 578999997543 47865556779999999999999 589
Q ss_pred eeeEEeeCccccccCCeeecEEEecCC
Q 012225 125 GSFFYFPSLNLQRVSGGFGPVIINNRK 151 (468)
Q Consensus 125 Gt~wyH~H~~~q~~~Gl~G~liV~~~~ 151 (468)
|+||||||...+...||.|.|.|++..
T Consensus 276 G~~~~hch~~~H~~~GM~~~~~V~~~~ 302 (306)
T 1sdd_A 276 GRWTIASLIPRHFQAGMQAYIDIKNCA 302 (306)
T ss_dssp CCCCCBCCSTTTGGGTCBCCC------
T ss_pred eEEEEEeCChHHHhcCCeEEEEEecCC
Confidence 999999999999999999999998743
No 63
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=99.24 E-value=1.5e-11 Score=100.80 Aligned_cols=83 Identities=10% Similarity=0.115 Sum_probs=64.1
Q ss_pred CceEEEecCCEEEEEEEeCCCCCceeecCcccCCCCCCCCCCC-----CCCCCcCCCCceEEEEEeCCCceeeEEeeCcc
Q 012225 60 GAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQ-----GTNCPIPSQWNWTYQFQVKDQIGSFFYFPSLN 134 (468)
Q Consensus 60 gP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~-----~tq~~I~PG~~~~y~f~~~~~~Gt~wyH~H~~ 134 (468)
.+.|++++||+|++ +|....++++|+|+.... ..+|.. .....+.||++++|.|++++++|+||||||
T Consensus 19 P~~i~v~~Gd~V~~--~n~~~~~H~~~~~~~~~~---~~~g~~~~~~~~~~~~~~pG~~~~~~f~~~~~~G~y~y~C~-- 91 (106)
T 2gim_A 19 PAKLTIKPGDTVEF--LNNKVPPHNVVFDAALNP---AKSADLAKSLSHKQLLMSPGQSTSTTFPADAPAGEYTFYCE-- 91 (106)
T ss_dssp SSEEEECTTCEEEE--EECSSSCCCBEECSSSST---TCCHHHHHHHCBCSCCCSTTCEEEEECCTTCCSEEEEEECT--
T ss_pred CCEEEECCCCEEEE--EECCCCCceEEEeCCCCc---ccccccchhccccceeeCCCCEEEEEEecCCCCceEEEEeC--
Confidence 37999999998755 588778899999886432 123320 123458999999999987557999999999
Q ss_pred ccccCCeeecEEEec
Q 012225 135 LQRVSGGFGPVIINN 149 (468)
Q Consensus 135 ~q~~~Gl~G~liV~~ 149 (468)
.|...||.|.|+|++
T Consensus 92 ~H~~~GM~G~i~V~~ 106 (106)
T 2gim_A 92 PHRGAGMVGKITVAG 106 (106)
T ss_dssp TTGGGTCEEEEEECC
T ss_pred ChhhcCcEEEEEEcC
Confidence 677789999999964
No 64
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=99.22 E-value=1.1e-10 Score=122.34 Aligned_cols=218 Identities=12% Similarity=0.034 Sum_probs=138.9
Q ss_pred EEEEEEcCcCCCceEEEecCCEEEEEEEeCCCC-CceeecCcc-cCCCCCCCCCC----CC--CCCCcCCCCceEEEEEe
Q 012225 49 QQVIAINGKFPGAVLNATTNNNIVINVQNDLDE-SLLMTWPGI-QMRRNSWQDGV----QG--TNCPIPSQWNWTYQFQV 120 (468)
Q Consensus 49 ~~~~~~Ng~~PgP~i~~~~Gd~v~v~v~N~l~~-~~siH~HG~-~~~~~~~~DGv----~~--tq~~I~PG~~~~y~f~~ 120 (468)
...++|||+. .|.|.++.| ++++|+.|.... ...+|+.|. .... ...||. |. ....|.|||+++..+++
T Consensus 230 ~d~~liNG~~-~p~~~v~~~-~~RlRliNa~~~~~~~~~i~~~~~~~v-ia~DG~~~~~P~~~~~l~l~pgeR~dvlv~~ 306 (513)
T 2wsd_A 230 GETILVNGKV-WPYLEVEPR-KYRFRVINASNTRTYNLSLDNGGDFIQ-IGSDGGLLPRSVKLNSFSLAPAERYDIIIDF 306 (513)
T ss_dssp CSEEEETTEE-SCEEECCSS-EEEEEEEECCSSCCEEEEETTCCCEEE-EEETTEEEEEEEEESEEEECTTCEEEEEEEC
T ss_pred cceEEECCcc-cceEEecCC-EEEEEEEccCCcceEEEEECCCCeEEE-EccCCCcccCceEeCeEEECCeeeEEEEEEC
Confidence 3678999996 689999885 999999999864 568999887 4332 568994 32 33568999999999999
Q ss_pred CCCceeeEE-eeCcc--ccccCCeeec-EEEecCC--CC----CCCC--CC--------CCCcEEEEEeeeeecchHHHH
Q 012225 121 KDQIGSFFY-FPSLN--LQRVSGGFGP-VIINNRK--VI----PIPF--DQ--------PEGDIIFLIGDWYTRNHTALR 180 (468)
Q Consensus 121 ~~~~Gt~wy-H~H~~--~q~~~Gl~G~-liV~~~~--~~----~~~~--~~--------~~~e~~l~l~d~~~~~~~~~~ 180 (468)
.+.+|.++. .+-.. .....+...+ +-.+... .. ..|. .. ...+..+.|...
T Consensus 307 ~~~~g~~~~l~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~l~~~--------- 377 (513)
T 2wsd_A 307 TAYEGESIILANSAGCGGDVNPETDANIMQFRVTKPLAQKDESRKPKYLASYPSVQHERIQNIRTLKLAGT--------- 377 (513)
T ss_dssp GGGTTCEEEEEECCCSSSSCCTTTTTEEEEEECCSCCSSCCCCCCCSBCSCCGGGCCCCEEEEEEEEEEEE---------
T ss_pred CCCCCcEEEEEecccccccCCCCCCcceEEEEeccCcccCccCCCCccccCCCCcccCCCcceEEEEEEee---------
Confidence 644677333 11110 0000001112 2222111 00 0010 00 000111222111
Q ss_pred HHhhcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceEEEEcCCCEEEEEEEEcCCCCeeeEEEeCCeeEEEEeeCc---
Q 012225 181 TALDSGKDLDMPDGVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGH--- 257 (468)
Q Consensus 181 ~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~Via~DG~--- 257 (468)
++. .....++|||+.+. ....+.++.|++++|+|+|.+.. .|.||+|||.|+|++.+|.
T Consensus 378 --~~~----~g~~~~~iNg~~~~-----------~~~~~~~~~g~~~~w~l~N~~~~-~HP~HlHG~~F~Vl~~~~~~~~ 439 (513)
T 2wsd_A 378 --QDE----YGRPVLLLNNKRWH-----------DPVTETPKVGTTEIWSIINPTRG-THPIHLHLVSFRVLDRRPFDIA 439 (513)
T ss_dssp --ECT----TSCEEEEETTBCTT-----------SCCCBCCBTTCEEEEEEEECSSS-CEEEEESSCCEEEEEEEEBCHH
T ss_pred --cCC----CCCceEeECCccCC-----------CcccEecCCCCEEEEEEEcCCCC-CcCEeEeCceEEEEEecCcccc
Confidence 000 01125789999862 12456899999999999998866 6999999999999998862
Q ss_pred ------------c------ccceeeceEEEcCCceEEEEEEecCCCCcceEEEEEecc
Q 012225 258 ------------Y------TSQQNYTSFEIHVGQSYSFLVTMDQNASSDYYIVASARF 297 (468)
Q Consensus 258 ------------~------~~p~~~d~i~l~pGqR~dv~v~~~~~~g~~y~i~~~~~~ 297 (468)
. -++...|++.|.||+++.+++++++.+| .|.++.+...
T Consensus 440 ~~~~~~~~~~~~~~~~~~~~~~~~rDTv~v~pg~~~~i~~~f~dnpG-~w~~HCHil~ 496 (513)
T 2wsd_A 440 RYQESGELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFGPYSG-RYVWHCHALE 496 (513)
T ss_dssp HHHHHCCCCBSSCCBCCCGGGSSCBSEEEECTTEEEEEEEECCSCCE-EEEEEESCHH
T ss_pred cccccccccccCCCCCCCccccCcccEEEeCCCCEEEEEEEecCCCC-CEEEEcCChh
Confidence 0 0134689999999999999999965678 7878877543
No 65
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=99.20 E-value=9e-11 Score=115.25 Aligned_cols=100 Identities=13% Similarity=0.150 Sum_probs=81.5
Q ss_pred EEEcCcCC--CceEEEecCCEEEEEEEeCCCCCceeecCcccCCCCCCCCCCCC--------CCCCcCCCCceEEEEEeC
Q 012225 52 IAINGKFP--GAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQG--------TNCPIPSQWNWTYQFQVK 121 (468)
Q Consensus 52 ~~~Ng~~P--gP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~--------tq~~I~PG~~~~y~f~~~ 121 (468)
|++||+.- .|.++++.||+|++++.|..+..+++|+||..... ...||..+ ....|.||+++++.+.+.
T Consensus 163 ~t~Ng~~~~~~~~l~v~~Ge~vr~~liN~g~~~hpfHlHGh~F~v-~~~~~~~~~~~~~~~~Dtv~l~Pger~~v~v~a~ 241 (313)
T 3tas_A 163 MTINNRPAHTGPDFEATVGDRVEFVMITHGEYYHTFHLHGHRWAD-NRTGMLTGPDDPSQVIDNKICGPADSFGFQVIAG 241 (313)
T ss_dssp TEETTCCTTCCCCEEEETTCEEEEEEEEESSCCEEEEETTCCEES-STTSSCCSTTCCCCEESEEEECTTCEEEEEEETT
T ss_pred hhcccCCcccccccccccCCEEEEEEecccccceeeeecCCeeEE-EEECCccCCCCCCeeeeEEEeCCCcceEEEEEec
Confidence 67887632 68999999999999999999999999999986542 23444322 123489999999999873
Q ss_pred --CCceeeEEeeCccccccCCeeecEEEecCCC
Q 012225 122 --DQIGSFFYFPSLNLQRVSGGFGPVIINNRKV 152 (468)
Q Consensus 122 --~~~Gt~wyH~H~~~q~~~Gl~G~liV~~~~~ 152 (468)
+.+|+|+||||...+...||.|.+.|++++.
T Consensus 242 ~~~nPG~w~~HCHi~~H~~~GM~~~f~V~~~d~ 274 (313)
T 3tas_A 242 EGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDG 274 (313)
T ss_dssp TTTCSEEEEEEECSHHHHHTTCEEEEEEECTTC
T ss_pred cCCCCEeEEEEeCChHHHHCCCeEEEEEECCCC
Confidence 3589999999999999999999999998765
No 66
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=99.19 E-value=2.5e-11 Score=130.93 Aligned_cols=101 Identities=15% Similarity=0.116 Sum_probs=85.9
Q ss_pred eEEEEEEcCcC-CCceEEEecCCEEEEEEEeCCC--CCceeecCcccCCCCCCCCCCCCCCCCcCCCCceEEEEEeCCCc
Q 012225 48 PQQVIAINGKF-PGAVLNATTNNNIVINVQNDLD--ESLLMTWPGIQMRRNSWQDGVQGTNCPIPSQWNWTYQFQVKDQI 124 (468)
Q Consensus 48 ~~~~~~~Ng~~-PgP~i~~~~Gd~v~v~v~N~l~--~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~y~f~~~~~~ 124 (468)
...+++|||+. +.|+|++++|++|+++|.|... ..+.+|+||..... ...||.......|.||+++++.|++ +++
T Consensus 225 ~~~~~~iNG~~~~~p~l~v~~G~~vrlrliN~~~~~~~h~~hlhG~~f~v-i~~d~~~~d~v~l~pg~r~~v~~~~-~~p 302 (647)
T 1sdd_B 225 SHEFHAINGMIYNLPGLRMYEQEWVRLHLLNLGGSRDIHVVHFHGQTLLE-NGTQQHQLGVWPLLPGSFKTLEMKA-SKP 302 (647)
T ss_dssp CCEEEEETTBSSCCCCCEEETTCEEEEEEEECCCTTCCEEEEETTCCEEE-CSSSCEEESSEEECTTEEEEEEEEC-CSS
T ss_pred cCceeccCCEecCCCCeEEcCCCEEEEEEEeCCCCCcceeEEEcCcEEEE-ecCCCcccceEEECCCeEEEEEEEe-ccc
Confidence 35789999997 5799999999999999999975 47999999987643 2346533356779999999999999 579
Q ss_pred eeeEEeeCccccccCCeeecEEEecC
Q 012225 125 GSFFYFPSLNLQRVSGGFGPVIINNR 150 (468)
Q Consensus 125 Gt~wyH~H~~~q~~~Gl~G~liV~~~ 150 (468)
|+|+||||...+...||.|.++|.++
T Consensus 303 G~w~~hch~~~h~~~Gm~~~~~V~~~ 328 (647)
T 1sdd_B 303 GWWLLDTEVGEIQRAGMQTPFLIVDR 328 (647)
T ss_dssp EEEEEECCCHHHHTTTCEEEEEEECT
T ss_pred eEeecccCcccccccccccceeeecc
Confidence 99999999999999999999999864
No 67
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=99.19 E-value=2.6e-10 Score=119.79 Aligned_cols=248 Identities=12% Similarity=-0.004 Sum_probs=146.6
Q ss_pred EEEEEEEEEEEECCCCc-----------eEEEEEEcCcCCCceEEEecCCEEEEEEEeCCC-CCceeecCc-------cc
Q 012225 31 IFYDFKVSYITASPLGV-----------PQQVIAINGKFPGAVLNATTNNNIVINVQNDLD-ESLLMTWPG-------IQ 91 (468)
Q Consensus 31 ~~~~l~~~~~~~~~dG~-----------~~~~~~~Ng~~PgP~i~~~~Gd~v~v~v~N~l~-~~~siH~HG-------~~ 91 (468)
+++.|.++.-....+|. ....++|||+. .|.|.++.| ++++||.|... ....++++| ..
T Consensus 172 ~d~~l~l~d~~~~~~g~~~~~~~~~~~~~gd~~lvNG~~-~p~~~v~~~-~~RlRliNa~~~~~~~l~i~~~~~~~~~h~ 249 (534)
T 3abg_A 172 FDIPMILTSKQYTANGNLVTTNGELNSFWGDVIHVNGQP-WPFKNVEPR-KYRFRFLDAAVSRSFGLYFADTDAIDTRLP 249 (534)
T ss_dssp HSCCEEEEEECBCSSSCBCCCTTCSSCCCCSEEEETTEE-SCBCBCCSS-EEEEEEEECCSSCCEEEEECCSSSTTCCCC
T ss_pred ceEEEEEeeeeecCCCceeccCCCCccccCceeccCCcc-CceEEecCc-EEEEEEEecCCcceEEEEEecccCcCCCcc
Confidence 34556666544443332 24579999985 789999985 99999999986 456788876 32
Q ss_pred CCCCCCCCCC----CC--CCCCcCCCCceEEEEEeCCCce-eeEEeeCccccccCC-------eeecEEEecCCCCCCCC
Q 012225 92 MRRNSWQDGV----QG--TNCPIPSQWNWTYQFQVKDQIG-SFFYFPSLNLQRVSG-------GFGPVIINNRKVIPIPF 157 (468)
Q Consensus 92 ~~~~~~~DGv----~~--tq~~I~PG~~~~y~f~~~~~~G-t~wyH~H~~~q~~~G-------l~G~liV~~~~~~~~~~ 157 (468)
.. -...||. |. ....|.|||+++..+++.+.+| +||...........| ..+.+-+........+.
T Consensus 250 ~~-vIa~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~ 328 (534)
T 3abg_A 250 FK-VIASDSGLLEHPADTSLLYISMAERYEVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQPD 328 (534)
T ss_dssp EE-EEEETTEEEEEEEEESCEEECTTCEEEEEEECSSCTTSEEEEECCCCSSSSCCSCSSSTTTSEEEEEECCCCSSCSC
T ss_pred EE-EEEeCCCcccCceEeceEEECCccEEEEEEEcCCCCCceEEEEeccccccccccccCcCCcceeEEEecCCCCcCCC
Confidence 22 2457985 32 4466999999999999964477 588765321000000 01112222111000000
Q ss_pred CCCCCcEEEEEeeee-ecchHHHHHHhhcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceEEEEcCCCEEEEEEEEcCC
Q 012225 158 DQPEGDIIFLIGDWY-TRNHTALRTALDSGKDLDMPDGVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGT 236 (468)
Q Consensus 158 ~~~~~e~~l~l~d~~-~~~~~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~ 236 (468)
....+..|.... ..........+..+. ....++|||+.+... .....+.++.|++++|.|.|.+.
T Consensus 329 ---~~~~P~~L~~~~~p~~~~~~~~~~~~~~---~~~~w~iNG~~f~~~--------~~p~l~~v~~G~~~~w~i~N~~~ 394 (534)
T 3abg_A 329 ---TSVVPANLRDVPFPSPTTNTPRQFRFGR---TGPTWTINGVAFADV--------QNRLLANVPVGTVERWELINAGN 394 (534)
T ss_dssp ---CCCCCCCCCCCSCCCCCCCCCEEEECSC---CCSTTCCCCBTTBCT--------TSCCCCEECTTCEEEEEEEECSS
T ss_pred ---CCCCccccccCCCCCCccccceEEEEec---cCceeEECCcccCCC--------CCcceeeccCCCEEEEEEEcCCC
Confidence 000000000000 000000000000000 112578999987321 01124579999999999999886
Q ss_pred CCeeeEEEeCCeeEEEEe-eCcc---cc---ceeeceEEEcCCceEEEEEE-ecCCCCcceEEEEEecc
Q 012225 237 STSLNFRIQNHNLLLVET-EGHY---TS---QQNYTSFEIHVGQSYSFLVT-MDQNASSDYYIVASARF 297 (468)
Q Consensus 237 ~~~~~~~i~gh~~~Via~-DG~~---~~---p~~~d~i~l~pGqR~dv~v~-~~~~~g~~y~i~~~~~~ 297 (468)
...|.||||||.|+|++. +|.. .. ....|++.+.||+++.+.++ ++ .+| .|.++.+...
T Consensus 395 ~~~HP~HLHG~~F~Vl~~~~g~~~~~~~~~~~~~rDTV~v~pg~~v~I~~~~ad-npG-~w~~HCHil~ 461 (534)
T 3abg_A 395 GWTHPIHIHLVDFKVISRTSGNNARTVMPYESGLKDVVWLGRRETVVVEAHYAP-FPG-VYMFHCHNLI 461 (534)
T ss_dssp SCCCCEEESSCCEEEEEESSCCSSSCCCSGGGSCBSEECCCSSEEEEEEEECCS-CCE-EEEEEESCHH
T ss_pred CCCcCEEECCeeEEEEEEcCCCCcCcCCccccCCcCeEEcCCCCEEEEEEEECC-CCc-cEEEecChHH
Confidence 557999999999999998 6631 11 14589999999999999998 55 578 7888887654
No 68
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=99.14 E-value=1.7e-10 Score=112.49 Aligned_cols=100 Identities=11% Similarity=0.065 Sum_probs=79.6
Q ss_pred EEEcCcCC--CceEEEecCCEEEEEEEeCCCCCceeecCcccCCCCCCCCCCCC--------CCCCcCCCCceEEEEEeC
Q 012225 52 IAINGKFP--GAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQG--------TNCPIPSQWNWTYQFQVK 121 (468)
Q Consensus 52 ~~~Ng~~P--gP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~--------tq~~I~PG~~~~y~f~~~ 121 (468)
|.+||+.- -|.++++.||+|+++|.|.....+++|+||...... ..|+... ....|.||+++++.+.+-
T Consensus 179 ~~~Ng~~~~~~p~l~v~~Ge~Vr~~liN~~~~~HpfHlHGh~F~v~-~~g~~~~~~~~~~~~Dtv~v~PGe~~~~~via~ 257 (299)
T 3t9w_A 179 MMINNRAHHDAPTFEANLGERVEWIAIGHGSNFHTFHLHGHRWLDN-RTGMRTSEYDPSPLIDIKDLNPGVSFGFQVIAG 257 (299)
T ss_dssp TEETTCCTTCCCEEEEETTCEEEEEEEEESSCCCEEEETTCCEESS-SSSSCCSTTCCCCEESEEECCTTCEEEEEEETT
T ss_pred eeecCccccccccceecCCCEEEEEEEeccccceeeeEecceEEEE-ecccccCCcCCCCceeeEEeCCceeEEEEEEEe
Confidence 56788743 479999999999999999999999999999764321 1222211 123489999999998763
Q ss_pred --CCceeeEEeeCccccccCCeeecEEEecCCC
Q 012225 122 --DQIGSFFYFPSLNLQRVSGGFGPVIINNRKV 152 (468)
Q Consensus 122 --~~~Gt~wyH~H~~~q~~~Gl~G~liV~~~~~ 152 (468)
+.+|+|+||||...+...||.|.+.|++.+.
T Consensus 258 ~~dnPG~w~~HCHi~~H~~~GM~~~f~V~~~~~ 290 (299)
T 3t9w_A 258 EGVGPGMWMYHCHVQNHSDMGMAGMFLVRNADG 290 (299)
T ss_dssp TTTCSEEEEEEECSHHHHHTTCEEEEEEECTTS
T ss_pred eCCCCeeEEEEcCCHHHHhcCCeEEEEEECCCC
Confidence 4589999999999999999999999998765
No 69
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=99.11 E-value=3.9e-10 Score=97.21 Aligned_cols=90 Identities=10% Similarity=0.028 Sum_probs=67.6
Q ss_pred cCCCceEEEecCCEEEEEEEeCCCC-CceeecCcccC-----------------CCCCCCCCCCC-CCCCcCCCCceEEE
Q 012225 57 KFPGAVLNATTNNNIVINVQNDLDE-SLLMTWPGIQM-----------------RRNSWQDGVQG-TNCPIPSQWNWTYQ 117 (468)
Q Consensus 57 ~~PgP~i~~~~Gd~v~v~v~N~l~~-~~siH~HG~~~-----------------~~~~~~DGv~~-tq~~I~PG~~~~y~ 117 (468)
+|--+.|++++||+|+++++|.... .++++.|+... ...+..+.... ....|.||+++++.
T Consensus 31 ~F~p~~i~v~~G~~V~~~~~N~~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~t~~l~pGet~~v~ 110 (139)
T 2aan_A 31 AFDKTELTVSAGQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPADKSNIIAESPLANGNETVEVT 110 (139)
T ss_dssp SBSCSEEEECTTCEEEEEEECCCSSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSCCTTEEEECCCBCTTCEEEEE
T ss_pred EEcCCeEEECCCCEEEEEEEeCCCCCCeeEEEeccccccchhhhhhhhcccccccccCcccccccccccccCCCCEEEEE
Confidence 3445799999999999999999877 89999887421 00000111011 22448999999999
Q ss_pred EEeCCCceeeEEeeCccccccCCeeecEEEe
Q 012225 118 FQVKDQIGSFFYFPSLNLQRVSGGFGPVIIN 148 (468)
Q Consensus 118 f~~~~~~Gt~wyH~H~~~q~~~Gl~G~liV~ 148 (468)
|++ +++|+|+||||...|.. ||.|.|+|+
T Consensus 111 f~~-~~pG~y~f~C~~~~H~~-GM~G~i~V~ 139 (139)
T 2aan_A 111 FTA-PAAGTYLYICTVPGHYP-LMQGKLVVN 139 (139)
T ss_dssp EEC-CSSEEEEEECCSTTTTT-TSEEEEEEC
T ss_pred EEC-CCCeEEEEEcCCCChHH-cCEEEEEEC
Confidence 998 48999999999888887 999999984
No 70
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=99.08 E-value=9.4e-10 Score=94.87 Aligned_cols=91 Identities=12% Similarity=0.093 Sum_probs=67.5
Q ss_pred CCCceEEEecCCEEEEEEEe--CCCCCceeecCccc------------CC----CCCCCCCCC-C-CCCCcCCCCceEEE
Q 012225 58 FPGAVLNATTNNNIVINVQN--DLDESLLMTWPGIQ------------MR----RNSWQDGVQ-G-TNCPIPSQWNWTYQ 117 (468)
Q Consensus 58 ~PgP~i~~~~Gd~v~v~v~N--~l~~~~siH~HG~~------------~~----~~~~~DGv~-~-tq~~I~PG~~~~y~ 117 (468)
|-.+.|+++.||+|+++++| .....|.++.+... .. .-+..|... . ....|.||++.++.
T Consensus 30 F~P~~i~v~~G~tV~~~~~N~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pG~~~~~~ 109 (140)
T 1qhq_A 30 FAQTSLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPDTPNALAWTAMLNAGESGSVT 109 (140)
T ss_dssp BSCSEEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCTTCTTEEEECCCBCTTEEEEEE
T ss_pred EeCCeEEECCCCEEEEEEECCCCCCCceeEEEeccCcchhhhhhhhhhhcccccccCccccccccccceeeCCCceeEEE
Confidence 33479999999999999999 66788888887310 00 000011111 1 22458999999999
Q ss_pred EEeCCCceeeEEeeCccccccCCeeecEEEec
Q 012225 118 FQVKDQIGSFFYFPSLNLQRVSGGFGPVIINN 149 (468)
Q Consensus 118 f~~~~~~Gt~wyH~H~~~q~~~Gl~G~liV~~ 149 (468)
|++ +.+|+|||||+...+...||.|.|+|.+
T Consensus 110 ~~~-~~~G~y~f~C~~~~H~~~GM~g~i~V~p 140 (140)
T 1qhq_A 110 FRT-PAPGTYLYICTFPGHYLAGMKGTLTVTP 140 (140)
T ss_dssp EEC-CSSEEEEEECCSTTTTTTTCEEEEEEEC
T ss_pred EEe-CCCeeEEEEeCCcCHhhcCCEEEEEEcC
Confidence 998 5899999999988888899999999974
No 71
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=99.04 E-value=1.1e-08 Score=107.84 Aligned_cols=240 Identities=8% Similarity=0.041 Sum_probs=144.1
Q ss_pred EEEEEcCcCC----------------CceEEEecCCEEEEEEEeCCC-CCceeecCcccCCCCCCCCCCCC-----CCCC
Q 012225 50 QVIAINGKFP----------------GAVLNATTNNNIVINVQNDLD-ESLLMTWPGIQMRRNSWQDGVQG-----TNCP 107 (468)
Q Consensus 50 ~~~~~Ng~~P----------------gP~i~~~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~~~DGv~~-----tq~~ 107 (468)
..++|||+-. .++|++++|+++++|+.|... ....+|++|..+.. ...||.+. ....
T Consensus 226 d~~liNG~~~~~c~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~V-Ia~DG~~v~P~~~~~l~ 304 (580)
T 3sqr_A 226 ENTLMNGTNTFDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTV-IANDLVPIVPYTTDTLL 304 (580)
T ss_dssp SEEEETTBCCCCCTTCCCTTBCCCCCCCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEEE-EEETTEEEEEEEESSEE
T ss_pred ceEEECCcccCCCccccccccccCCCceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEEE-EEeCCccCCceEeeEEE
Confidence 5689999742 379999999999999999986 45689999987553 46799852 3356
Q ss_pred cCCCCceEEEEEeCCCceeeEEeeCccc-----cccCCeeecEEEecCCCCCCCCC-C-CCCcEEEEEee--eeecchH-
Q 012225 108 IPSQWNWTYQFQVKDQIGSFFYFPSLNL-----QRVSGGFGPVIINNRKVIPIPFD-Q-PEGDIIFLIGD--WYTRNHT- 177 (468)
Q Consensus 108 I~PG~~~~y~f~~~~~~Gt~wyH~H~~~-----q~~~Gl~G~liV~~~~~~~~~~~-~-~~~e~~l~l~d--~~~~~~~- 177 (468)
|.|||+++..+++.+.+|.||....... +...... +|+.........|-. . ...+. .+.+ .......
T Consensus 305 i~pGqRydVlv~a~~~~g~Y~i~a~~~~~~~~~~~~~~~~-aiL~Y~~~~~~~P~~~~~~~~~~--~~~~~~~~L~P~~~ 381 (580)
T 3sqr_A 305 IGIGQRYDVIVEANAAADNYWIRGNWGTTCSTNNEAANAT-GILRYDSSSIANPTSVGTTPRGT--CEDEPVASLVPHLA 381 (580)
T ss_dssp ECTTCEEEEEEECCSCSSEEEEECCCCTTTSCBTTGGGCE-EEEESSTTCCCCCCCCCCCCCCC--SCCSCGGGCCBSSC
T ss_pred EccceEEEEEEEeCCCCCeEEEEEecccccCccCCCCceE-EEEEECCCCCCCCCCCCCCccch--hhcccccccccCCC
Confidence 8999999999999756899999976432 1111112 233322111111110 0 00000 0000 0000000
Q ss_pred -HH------HHHhhcCCCCCCCceEEEcCcCCCCCCCc------cCCCC---CcceEEEE----cCCCEEEEEEEEcCC-
Q 012225 178 -AL------RTALDSGKDLDMPDGVLINGKGPYRYNTT------LVPDG---IEYETINV----DPGKTYRVRVHNVGT- 236 (468)
Q Consensus 178 -~~------~~~~~~g~~~~~~~~~liNG~~~~~~~~~------~~~~~---~~~~~~~v----~~G~~~rlRliN~~~- 236 (468)
.. ...+..+ ......+.|||..+...... ..+.. .....+.+ +.|+++.|.|-|.+.
T Consensus 382 ~~~~~~~~~~~~l~~~--~~~~~~w~iN~~s~~~~~~~P~L~~~~~g~~~~~~~~~~~~~~~~~~~~~~VeiVi~n~~~~ 459 (580)
T 3sqr_A 382 LDVGGYSLVDEQVSSA--FTNYFTWTINSSSLLLDWSSPTTLKIFNNETIFPTEYNVVALEQTNANEEWVVYVIEDLTGF 459 (580)
T ss_dssp CBCCSEEEEEEEEEEE--ESSSEEEEETTBCCCCCTTSCHHHHHHTTCCCCCGGGCEEEECC----CCEEEEEEEECSSS
T ss_pred CCCCCccceEEEEEec--cCCceeEEECCEecccCCCCCchhhhhcCCccCCCCcceeecccccCCCcEEEEEEeCCCcc
Confidence 00 0000000 01123578899876321111 00100 01123444 359999999999871
Q ss_pred CCeeeEEEeCCeeEEEEeeCc------------cccceeeceEEEcCCceEEEEEEecCCCCcceEEEEEecc
Q 012225 237 STSLNFRIQNHNLLLVETEGH------------YTSQQNYTSFEIHVGQSYSFLVTMDQNASSDYYIVASARF 297 (468)
Q Consensus 237 ~~~~~~~i~gh~~~Via~DG~------------~~~p~~~d~i~l~pGqR~dv~v~~~~~~g~~y~i~~~~~~ 297 (468)
...|.||+|||+|.||+.+.. +..|...|++.+.+|+...+.+++++ || .+.++.+...
T Consensus 460 ~~~HP~HLHGh~F~vv~~g~G~f~~~~~~~~~nl~nP~~rDTv~v~~~g~~~irf~adN-PG-~W~~HCHi~~ 530 (580)
T 3sqr_A 460 GIWHPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLDN-PG-SWLLHCHIAW 530 (580)
T ss_dssp CCCEEEEESSCCEEEEEEESSCCCTTTSGGGCCCBSCCEESEEEECTTSEEEEEEESCS-CE-EEEEEECSHH
T ss_pred ccceeeEecCceEEEEecCCCccCccccccccccCCCceeeEEEeCCCceEEEEEEcCC-Ce-eeEEEECcHH
Confidence 247999999999999998432 23477899999999999999999995 57 6777877654
No 72
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.99 E-value=1.1e-09 Score=93.29 Aligned_cols=78 Identities=14% Similarity=0.137 Sum_probs=56.9
Q ss_pred cCcCCCceEEEecCCEEEEEEEeCCCCCceeecCcccCCCCCCCCCCCC-CCCCcCCCCceEEEEEeCCCceeeEEeeCc
Q 012225 55 NGKFPGAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQG-TNCPIPSQWNWTYQFQVKDQIGSFFYFPSL 133 (468)
Q Consensus 55 Ng~~PgP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~-tq~~I~PG~~~~y~f~~~~~~Gt~wyH~H~ 133 (468)
+..|-.+.|++++||+|++ +|....+|++++... .+|... ....+.||++++|.| +++|+|+|||-.
T Consensus 54 ~~~F~P~~i~V~~GdtV~~--~N~d~~~H~v~~~~~-------~~g~~~~~s~~l~pG~t~~~tF---~~~G~y~y~C~~ 121 (132)
T 3c75_A 54 KMKYLTPEVTIKAGETVYW--VNGEVMPHNVAFKKG-------IVGEDAFRGEMMTKDQAYAITF---NEAGSYDYFCTP 121 (132)
T ss_dssp TTEESSSEEEECTTCEEEE--EECSSSCBCCEECTT-------TSSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSS
T ss_pred eeEEeCCEEEECCCCEEEE--EECCCCceEEEEeCC-------CCCcccccccccCCCCEEEEEc---CCCEEEEEEeCC
Confidence 3444447999999999865 588777887776542 123222 334589999999988 369999999965
Q ss_pred cccccCCeeecEEEe
Q 012225 134 NLQRVSGGFGPVIIN 148 (468)
Q Consensus 134 ~~q~~~Gl~G~liV~ 148 (468)
|. ||.|.|+|+
T Consensus 122 --H~--gM~G~I~V~ 132 (132)
T 3c75_A 122 --HP--FMRGKVIVE 132 (132)
T ss_dssp --CT--TCEEEEEEC
T ss_pred --Cc--CCEEEEEEC
Confidence 22 999999985
No 73
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.96 E-value=1.6e-09 Score=87.69 Aligned_cols=79 Identities=14% Similarity=0.181 Sum_probs=64.1
Q ss_pred cCcCCCceEEEecCCEEEEEEEeCCCCCceeecCcccCCCCCCCCCCCCCCCCcCCCCceEEEEEeCCCceeeEEeeCcc
Q 012225 55 NGKFPGAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQGTNCPIPSQWNWTYQFQVKDQIGSFFYFPSLN 134 (468)
Q Consensus 55 Ng~~PgP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~y~f~~~~~~Gt~wyH~H~~ 134 (468)
|..|-...|++++||+|++.++|.....+++...+... ...+.||++.+|.|+. +++|+|.|+|.
T Consensus 22 ~~~F~P~~i~v~~G~tV~~~~~n~d~~~H~~~~~~~~~------------~~~~~pg~~~~~~~t~-~~~G~Y~y~C~-- 86 (100)
T 4hci_A 22 DDYFNPNVITIPINESTTLLLKNKGKSEHTFTIKKLGI------------DVVVESGKEKNITVKP-KSAGTYELICR-- 86 (100)
T ss_dssp TTEEESSEEEECTTSCEEEEEEECSSSCEEEEEGGGTE------------EEEECTTCEEEEEECC-CSCEEEEEECT--
T ss_pred CCEEeCCEEEECCCCEEEEEEEcCCCceEEEEEecCCc------------ceeecCCcceeEEEec-ccCceEEEECc--
Confidence 44554469999999999999999987777777665522 1347899999999998 68999999996
Q ss_pred ccccCCeeecEEEe
Q 012225 135 LQRVSGGFGPVIIN 148 (468)
Q Consensus 135 ~q~~~Gl~G~liV~ 148 (468)
.+...||.|.|+|+
T Consensus 87 ~H~~~gM~G~i~Ve 100 (100)
T 4hci_A 87 YHLLKGMEGKVIVK 100 (100)
T ss_dssp TTGGGTCEEEEEEC
T ss_pred cccCCCCEEEEEEC
Confidence 46668999999996
No 74
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.92 E-value=8.9e-10 Score=88.79 Aligned_cols=79 Identities=10% Similarity=0.150 Sum_probs=59.1
Q ss_pred ceEEEecCCEEEEEEEeCCCCCceeecCcccCCCCCCCCCC--CCCCCCcCCCCceEEEEEeCCCceeeEEeeCcccccc
Q 012225 61 AVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGV--QGTNCPIPSQWNWTYQFQVKDQIGSFFYFPSLNLQRV 138 (468)
Q Consensus 61 P~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv--~~tq~~I~PG~~~~y~f~~~~~~Gt~wyH~H~~~q~~ 138 (468)
+.|++++||+|+ ++|....++++|+|+.... ...|.- +.....+.||+++++.|. ++|+|+|||| .|..
T Consensus 18 ~~i~v~~G~~V~--~~n~~~~~H~~~~~~~~~p--~~~~~~~~~~~~~~~~pG~~~~~tf~---~~G~y~y~C~--~H~~ 88 (98)
T 2plt_A 18 KTLTIKSGETVN--FVNNAGFPHNIVFDEDAIP--SGVNADAISRDDYLNAPGETYSVKLT---AAGEYGYYCE--PHQG 88 (98)
T ss_dssp SEEEECTTCEEE--EEECSSCCEEEEECGGGSC--TTCCHHHHCEEEEECSTTCEEEEECC---SCEEEEEECG--GGGG
T ss_pred CEEEECCCCEEE--EEECCCCceEEEEeCCCCC--CccccccccccceecCCCCEEEEEeC---CCeEEEEEcC--Cccc
Confidence 689999999875 5898878999999986331 111110 001245789999999874 6999999999 5667
Q ss_pred CCeeecEEEe
Q 012225 139 SGGFGPVIIN 148 (468)
Q Consensus 139 ~Gl~G~liV~ 148 (468)
.||.|.|+|+
T Consensus 89 ~gM~G~i~V~ 98 (98)
T 2plt_A 89 AGMVGKIIVQ 98 (98)
T ss_dssp GTCEEEEEEC
T ss_pred cCCeEEEEEC
Confidence 7999999984
No 75
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=98.90 E-value=4.9e-08 Score=104.49 Aligned_cols=92 Identities=7% Similarity=0.002 Sum_probs=72.6
Q ss_pred ceEEEcCcCCCCCCCccCCCCCcceEEEEcCCCEEEEEEEEcCCCCeeeEEEeCCeeEEEEeeCccc-------------
Q 012225 193 DGVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYT------------- 259 (468)
Q Consensus 193 ~~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~Via~DG~~~------------- 259 (468)
..+.+||+.+. ....+.++.|++++|.|+|.+.. .|.||||||.|+|++.+|...
T Consensus 459 ~~~~~n~~~~~-----------~~~~~~~~~g~~~~w~i~N~~~~-~HP~HLHG~~F~Vl~~~g~~~~~~~~~~~~~~~~ 526 (612)
T 3gyr_A 459 KTYRRTARTFN-----------DGLGFTIGEGTHEQWTFLNLSPI-LHPMHIHLADFQVLGRDAYDASGFDLALGGTRTP 526 (612)
T ss_dssp EEEEEEECSTT-----------SCCCEEEETTCEEEEEEEECSSS-CEEEEESSCEEEEEEEEEEECTTEETTTTEESSC
T ss_pred ccccccCccCC-----------CCcceEeCCCCEEEEEEEcCCCC-CcCEeECCCcEEEEeecCCcCccccccccccccc
Confidence 45678887752 23568899999999999999887 599999999999999876421
Q ss_pred --------------cceeeceEEEcCCceEEEEEEecCCCCcceEEEEEecc
Q 012225 260 --------------SQQNYTSFEIHVGQSYSFLVTMDQNASSDYYIVASARF 297 (468)
Q Consensus 260 --------------~p~~~d~i~l~pGqR~dv~v~~~~~~g~~y~i~~~~~~ 297 (468)
++...|++.+.+|+.+.|.+++.+.+| .|-++.+...
T Consensus 527 ~~~~~~~~~~~~~~~~~~kDTv~v~~~~~v~i~~rfadnpG-~w~~HCHil~ 577 (612)
T 3gyr_A 527 VRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYG-RFMYHCHLLE 577 (612)
T ss_dssp EEEEEEEECCCCTTCSSCBSEEEECSSEEEEEEEECCSCCE-EEEEEESSHH
T ss_pred cccccccccCcccccCCCCcEEEECCCCEEEEEEEeCCCCc-ceEEcCCChH
Confidence 122479999999999999999655678 7777887653
No 76
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.86 E-value=9.7e-10 Score=88.60 Aligned_cols=81 Identities=11% Similarity=0.181 Sum_probs=58.2
Q ss_pred CceEEEecCCEEEEEEEeCCCCCceeecCcccCCCCCCCCCCCCCCCCcCCCCceEEEEEeCCCceeeEEeeCccccccC
Q 012225 60 GAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQGTNCPIPSQWNWTYQFQVKDQIGSFFYFPSLNLQRVS 139 (468)
Q Consensus 60 gP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~y~f~~~~~~Gt~wyH~H~~~q~~~ 139 (468)
.+.|++++||+|++ +|.....+++|.++...++. ..++.......+.||+++++.| +++|+|+|||+ .|...
T Consensus 18 P~~i~v~~G~~V~~--~n~~~~~H~~~~~~~~~pg~-~~~~~~~~~~~~~pG~~~~~tf---~~~G~y~~~C~--~H~~~ 89 (98)
T 1pcs_A 18 PSTVTIKAGEEVKW--VNNKLSPHNIVFDADGVPAD-TAAKLSHKGLLFAAGESFTSTF---TEPGTYTYYCE--PHRGA 89 (98)
T ss_dssp SSEEEECTTCEEEE--EECSSCCEEEEECCSSSCHH-HHHHHCEEEEECSTTCEEEEEC---CSCEEEEEECG--GGTTT
T ss_pred CCEEEECCCCEEEE--EECCCCCcEEEEeCCCCCcc-ccccccccccccCCCCEEEEEc---CCCeEEEEEcC--Ccccc
Confidence 36899999998765 58877789999887532100 0000001134579999999988 36999999999 67778
Q ss_pred CeeecEEEe
Q 012225 140 GGFGPVIIN 148 (468)
Q Consensus 140 Gl~G~liV~ 148 (468)
||.|.|+|+
T Consensus 90 gM~G~i~V~ 98 (98)
T 1pcs_A 90 GMVGKVVVE 98 (98)
T ss_dssp TCEEEEEEC
T ss_pred CCeEEEEEC
Confidence 999999985
No 77
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=98.83 E-value=5.1e-09 Score=83.00 Aligned_cols=74 Identities=11% Similarity=0.211 Sum_probs=56.4
Q ss_pred CceEEEecCCEEEEEEEeCCCCCceeecCcccCCCCCCCCCCCCCCCCcCCCCceEEEEEeCCCceeeEEeeCccccccC
Q 012225 60 GAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQGTNCPIPSQWNWTYQFQVKDQIGSFFYFPSLNLQRVS 139 (468)
Q Consensus 60 gP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~y~f~~~~~~Gt~wyH~H~~~q~~~ 139 (468)
.+.|++++||+|++ +|.....+++|.++... .. .....+.||+++++.| +++|+|||||+ .+...
T Consensus 18 P~~i~v~~Gd~V~~--~n~~~~~H~v~~~~~~~----~~----~~~~~~~~g~~~~~~f---~~~G~y~~~C~--~H~~~ 82 (91)
T 1bxv_A 18 PSTIEIQAGDTVQW--VNNKLAPHNVVVEGQPE----LS----HKDLAFSPGETFEATF---SEPGTYTYYCE--PHRGA 82 (91)
T ss_dssp SSEEEECTTCEEEE--EECSSCCEEEEETTCGG----GC----EEEEECSTTCEEEEEC---CSCEEEEEECT--TTGGG
T ss_pred CCEEEECCCCEEEE--EECCCCCcEEEEeCCCc----cC----cccceeCCCCEEEEEe---CCCEEEEEEeC--CCccC
Confidence 46899999999765 58877889999887310 00 1224578999988877 47999999999 55666
Q ss_pred CeeecEEEe
Q 012225 140 GGFGPVIIN 148 (468)
Q Consensus 140 Gl~G~liV~ 148 (468)
||.|.|+|+
T Consensus 83 gM~g~i~V~ 91 (91)
T 1bxv_A 83 GMVGKIVVQ 91 (91)
T ss_dssp TCEEEEEEC
T ss_pred CCEEEEEEC
Confidence 999999984
No 78
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=98.79 E-value=8.8e-09 Score=101.65 Aligned_cols=102 Identities=14% Similarity=0.188 Sum_probs=82.1
Q ss_pred EEEEEEcCcCCC----ceEEEecCCEEEEEEEeCCC-CCceeecCcccCCCCCCCCCCCC-----CCCCcCCCCceEEEE
Q 012225 49 QQVIAINGKFPG----AVLNATTNNNIVINVQNDLD-ESLLMTWPGIQMRRNSWQDGVQG-----TNCPIPSQWNWTYQF 118 (468)
Q Consensus 49 ~~~~~~Ng~~Pg----P~i~~~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~~~DGv~~-----tq~~I~PG~~~~y~f 118 (468)
...++|||+.-. +.|++++|+++++++.|... ..+.+|+||..... -+.||.+. ....|.|||+++..|
T Consensus 198 ~~~~~iNG~~~~~~~~~~l~v~~G~~vRlRliN~~~~~~~~~~l~Gh~f~v-i~~DG~~~~p~~~d~l~l~pGer~dv~v 276 (327)
T 1kbv_A 198 PEYVVFNGHVGALTGDNALKAKAGETVRMYVGNGGPNLVSSFHVIGEIFDK-VYVEGGKLINENVQSTIVPAGGSAIVEF 276 (327)
T ss_dssp CSEEEETTSTTTTSGGGCEEEETTEEEEEEEEEEESSCCEEEEEETCCBSE-EEGGGSSCEECSBSEEEECTTEEEEEEE
T ss_pred CceEEEcCcccCCCCceeEEeCCCCEEEEEEECCCCCCceeEEEeCCEEEE-EEcCCCcCCCCceeEEEECCCCEEEEEE
Confidence 357899998642 57999999999999999874 67899999986543 34688632 335589999999999
Q ss_pred EeCCCceeeEEeeCcccc-ccCCeeecEEEecCCC
Q 012225 119 QVKDQIGSFFYFPSLNLQ-RVSGGFGPVIINNRKV 152 (468)
Q Consensus 119 ~~~~~~Gt~wyH~H~~~q-~~~Gl~G~liV~~~~~ 152 (468)
++. ++|+||+|||...+ ...|+.|.|.++....
T Consensus 277 ~~~-~pG~y~l~~h~~~~~~~~g~~a~l~~~g~~~ 310 (327)
T 1kbv_A 277 KVD-IPGNYTLVDHSIFRAFNKGALGQLKVEGAEN 310 (327)
T ss_dssp EEC-SCEEEEEEESSTHHHHHSSCEEEEEEESCCC
T ss_pred EeC-CCeEEEEEeccccccccCCcEEEEEECCCCC
Confidence 994 79999999998766 3678999999987553
No 79
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.77 E-value=8.8e-09 Score=82.72 Aligned_cols=76 Identities=9% Similarity=0.216 Sum_probs=57.4
Q ss_pred ceEEEecCCEEEEEEEeCCCCCceeecCcccCCCCCCCCCCC---CCCCCcCCCCceEEEEEeCCCceeeEEeeCccccc
Q 012225 61 AVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQ---GTNCPIPSQWNWTYQFQVKDQIGSFFYFPSLNLQR 137 (468)
Q Consensus 61 P~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~---~tq~~I~PG~~~~y~f~~~~~~Gt~wyH~H~~~q~ 137 (468)
+.|++++||+| +++|.....++++.++... .+|.. .....+.||+++++.| +++|+|+|||+ .|.
T Consensus 19 ~~i~v~~G~~V--~~~n~~~~~H~~~~~~~~~-----~~~~~~~~~~~~~~~~g~~~~~tf---~~~G~y~y~C~--~H~ 86 (97)
T 1b3i_A 19 KALSISAGDTV--EFVMNKVGPHNVIFDKVPA-----GESAPALSNTKLAIAPGSFYSVTL---GTPGTYSFYCT--PHR 86 (97)
T ss_dssp SEEEECTTCEE--EEEECSSCCCCBEEEECCT-----TSCHHHHCBCCCCCSCSCCEEEEC---CSCSEEEEECS--STT
T ss_pred CEEEECCCCEE--EEEECCCCCeEEEEeCCCC-----ccccccccccceecCCCCEEEEEe---CCCeEEEEEcc--Chh
Confidence 68999999985 5568876788888877532 12211 1224579999999988 37999999999 666
Q ss_pred cCCeeecEEEe
Q 012225 138 VSGGFGPVIIN 148 (468)
Q Consensus 138 ~~Gl~G~liV~ 148 (468)
.+||.|.|+|+
T Consensus 87 ~~gM~G~i~V~ 97 (97)
T 1b3i_A 87 GAGMVGTITVE 97 (97)
T ss_dssp TTTCEEEEEEC
T ss_pred hcCCEEEEEEC
Confidence 77999999984
No 80
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.77 E-value=1.6e-08 Score=82.05 Aligned_cols=79 Identities=3% Similarity=0.050 Sum_probs=56.7
Q ss_pred CceEEEecCCEEEEEEEeCCCCCceeecCcccCCCCCC--------CCCCCCCCCCcCCCCceEEEEEeCCCceeeEEee
Q 012225 60 GAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSW--------QDGVQGTNCPIPSQWNWTYQFQVKDQIGSFFYFP 131 (468)
Q Consensus 60 gP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~--------~DGv~~tq~~I~PG~~~~y~f~~~~~~Gt~wyH~ 131 (468)
.+.|++++||+|+ ++|....+++++++.-. ... +.+.......+.||+++++.| +++|+|+|||
T Consensus 16 P~~i~v~~G~tV~--~~n~~~~~H~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~tf---~~~G~y~y~C 87 (102)
T 1kdj_A 16 PDSITVSAGEAVE--FTLVGETGHNIVFDIPA---GAPGTVASELKAASMDENDLLSEDEPSFKAKV---STPGTYTFYC 87 (102)
T ss_dssp SSEEEECTTCCEE--EEECSSSCBCCEECCCT---TCCHHHHHHHHHTSCCTTCCBBTTBCEEEECC---CSCEEEEEEC
T ss_pred CCEEEECCCCEEE--EEECCCCCeEEEEeCcc---cccccccchhhcccccccceecCCCCEEEEEe---CCCeEEEEEe
Confidence 3789999999976 56887778888876310 000 001111224579999999887 3799999999
Q ss_pred CccccccCCeeecEEEe
Q 012225 132 SLNLQRVSGGFGPVIIN 148 (468)
Q Consensus 132 H~~~q~~~Gl~G~liV~ 148 (468)
+ .|...||.|.|+|+
T Consensus 88 ~--~H~~~gM~G~i~V~ 102 (102)
T 1kdj_A 88 T--PHKSANMKGTLTVK 102 (102)
T ss_dssp S--TTGGGTCEEEEEEC
T ss_pred C--CCcccCCeEEEEEC
Confidence 9 67778999999985
No 81
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.76 E-value=2.9e-08 Score=79.94 Aligned_cols=76 Identities=13% Similarity=0.214 Sum_probs=57.9
Q ss_pred ceEEEecCCEEEEEEEeCCCCCceeecCcccCCCCCCCCCCC-------CCCCCcCCCCceEEEEEeCCCceeeEEeeCc
Q 012225 61 AVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQ-------GTNCPIPSQWNWTYQFQVKDQIGSFFYFPSL 133 (468)
Q Consensus 61 P~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~-------~tq~~I~PG~~~~y~f~~~~~~Gt~wyH~H~ 133 (468)
+.|++++||+| +++|....++++|.++... .+|.. .....+.||+++++.|. ++|+|+|||+
T Consensus 17 ~~i~v~~G~tV--~~~n~~~~~H~~~~~~~~~-----p~g~~~~~~~~~~~~~~~~~G~~~~~~f~---~~G~y~~~C~- 85 (99)
T 1byp_A 17 SDLSIASGEKI--TFKNNAGFPHNDLFDKKEV-----PAGVDVTKISMPEEDLLNAPGEEYSVTLT---EKGTYKFYCA- 85 (99)
T ss_dssp SEEEECTTEEE--EEEECSSCCBCCEECTTSS-----CTTCCHHHHSCCTTCCBCSTTCEEEEEEC---SCEEEEEECG-
T ss_pred CEEEECCCCEE--EEEECCCCcceEEEeCCCC-----ccccccccccccccceeeCCCCEEEEEeC---CCcEEEEEcC-
Confidence 58999999985 5589887889999887522 12221 11235789999988874 6999999999
Q ss_pred cccccCCeeecEEEe
Q 012225 134 NLQRVSGGFGPVIIN 148 (468)
Q Consensus 134 ~~q~~~Gl~G~liV~ 148 (468)
.+...||.|.|+|+
T Consensus 86 -~H~~~gM~G~i~V~ 99 (99)
T 1byp_A 86 -PHAGAGMVGKVTVN 99 (99)
T ss_dssp -GGTTTTCEEEEEEC
T ss_pred -CccccCCEEEEEEC
Confidence 67777999999984
No 82
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.75 E-value=3.1e-08 Score=79.84 Aligned_cols=76 Identities=14% Similarity=0.239 Sum_probs=57.3
Q ss_pred ceEEEecCCEEEEEEEeCCCCCceeecCcccCCCCCCCCCCC-------CCCCCcCCCCceEEEEEeCCCceeeEEeeCc
Q 012225 61 AVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQ-------GTNCPIPSQWNWTYQFQVKDQIGSFFYFPSL 133 (468)
Q Consensus 61 P~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~-------~tq~~I~PG~~~~y~f~~~~~~Gt~wyH~H~ 133 (468)
+.|++++||+|+ ++|....+++++.++... .+|.. .....+.||+++++.|+ ++|+|+|||+
T Consensus 17 ~~i~v~~G~tV~--~~n~~~~~H~v~~~~~~~-----p~~~~~~~~~~~~~~~~~~~G~~~~~tf~---~~G~y~~~C~- 85 (99)
T 1plc_A 17 SEFSISPGEKIV--FKNNAGFPHNIVFDEDSI-----PSGVDASKISMSEEDLLNAKGETFEVALS---NKGEYSFYCS- 85 (99)
T ss_dssp SEEEECTTCEEE--EEECSSCCBCCEECTTSS-----CTTCCHHHHCCCTTCCBCSTTCEEEEECC---SCEEEEEECG-
T ss_pred CEEEECCCCEEE--EEECCCCceEEEEeCCCC-----cccccccccccccCccccCCCCEEEEEEC---CCceEEEEcC-
Confidence 699999999765 589877788888876422 12211 11235789999988874 6999999999
Q ss_pred cccccCCeeecEEEe
Q 012225 134 NLQRVSGGFGPVIIN 148 (468)
Q Consensus 134 ~~q~~~Gl~G~liV~ 148 (468)
.|..+||.|.|+|+
T Consensus 86 -~H~~~gM~G~i~V~ 99 (99)
T 1plc_A 86 -PHQGAGMVGKVTVN 99 (99)
T ss_dssp -GGTTTTCEEEEEEC
T ss_pred -CCcccCCEEEEEEC
Confidence 67778999999984
No 83
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=98.70 E-value=3.6e-08 Score=82.63 Aligned_cols=75 Identities=15% Similarity=0.048 Sum_probs=53.9
Q ss_pred ceEEEecCCEEEEEEEeCCCCCceeecCcccCCCCCCCCCCCCCCCCcCCCCceEEEEEeCCCceeeEEeeCccccccCC
Q 012225 61 AVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQGTNCPIPSQWNWTYQFQVKDQIGSFFYFPSLNLQRVSG 140 (468)
Q Consensus 61 P~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~y~f~~~~~~Gt~wyH~H~~~q~~~G 140 (468)
..|++++||+|++.++| .+|++..+.- ..-+|. ....+.||++++|.| +++|+|||+|. .|...|
T Consensus 21 ~~i~V~~GdtV~f~~~~---~~H~v~~~~~-----~~P~g~--~~f~~~pg~t~s~TF---~~pG~y~y~C~--~H~~~G 85 (123)
T 3erx_A 21 AFVRAEPGDVINFVPTD---KSHNVEAIKE-----ILPEGV--ESFKSKINESYTLTV---TEPGLYGVKCT--PHFGMG 85 (123)
T ss_dssp SEEEECTTEEEEEEESS---TTCCCEECTT-----SSCTTC--CCCBCCTTCCEEEEE---CSCEEEEEECG--GGTTTT
T ss_pred CEEEECCCCEEEEEECC---CCceEEEcCC-----cCCCCc--cceecCCCCEEEEEe---CCCeEEEEEeC--CCCcCC
Confidence 69999999998877776 2444443321 112232 123457999999888 36999999998 567789
Q ss_pred eeecEEEecC
Q 012225 141 GFGPVIINNR 150 (468)
Q Consensus 141 l~G~liV~~~ 150 (468)
|.|.|+|.+.
T Consensus 86 M~G~I~V~~~ 95 (123)
T 3erx_A 86 MVGLVQVGDA 95 (123)
T ss_dssp CEEEEEESSS
T ss_pred cEEEEEECCC
Confidence 9999999873
No 84
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=98.70 E-value=2.5e-09 Score=116.59 Aligned_cols=98 Identities=10% Similarity=-0.026 Sum_probs=82.0
Q ss_pred EEEEEcCcCCC--ceEEEecCCEEEEEEEeCCC--CCceeecCcccCCCCCCCCCCCCCCCCcCCCCceEEEEEeCCCce
Q 012225 50 QVIAINGKFPG--AVLNATTNNNIVINVQNDLD--ESLLMTWPGIQMRRNSWQDGVQGTNCPIPSQWNWTYQFQVKDQIG 125 (468)
Q Consensus 50 ~~~~~Ng~~Pg--P~i~~~~Gd~v~v~v~N~l~--~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~y~f~~~~~~G 125 (468)
.+++|||+..+ |.|++++|++++++|.|... ..+++|+||..... ...||.......|.||++++..|++ +++|
T Consensus 355 ~~~~ING~~~~~~~~l~v~~Ge~vr~rliN~g~~~~~H~fHlhGh~f~V-v~~dg~~~Dtv~l~Pg~~~~v~~~a-d~pG 432 (770)
T 2r7e_B 355 RFHAINGYIMDTLPGLVMAQDQRIRWYLLSMGSNENIHSIHFSGHVFTV-RKKEEYKMALYNLYPGVFETVEMLP-SKAG 432 (770)
T ss_dssp CEECTTSCTTTTCCCCCCCSSSCEEEECCCCCSSSCCCEEEBSSCCEEC-CSSSCCEESEEECCTTCCCEEEECC-SSCB
T ss_pred CccccCCccCCCCCCeEEeCCCEEEEEEEeCCCCcceEEEEEcCCEEEE-EecCCceeeEEEECCCeEEEEEEEe-CCCC
Confidence 57899999753 78999999999999999864 47999999997654 3456632234668999999999999 6899
Q ss_pred eeEEeeCccccccCCeeecEEEec
Q 012225 126 SFFYFPSLNLQRVSGGFGPVIINN 149 (468)
Q Consensus 126 t~wyH~H~~~q~~~Gl~G~liV~~ 149 (468)
.|++|||...+...||.+.+.|..
T Consensus 433 ~w~~hcH~~~H~~~GM~~~~~V~s 456 (770)
T 2r7e_B 433 IWRVECLIGEHLHAGMSTLFLVYS 456 (770)
T ss_dssp CCCBCCCSHHHHTTBCCCCCCBCC
T ss_pred ceEEEecccccccccccccccccc
Confidence 999999999999999999999854
No 85
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=98.68 E-value=4.3e-08 Score=96.94 Aligned_cols=98 Identities=15% Similarity=0.135 Sum_probs=74.6
Q ss_pred EEEEEcCcCC----CceEEEecCCEEEEEEEeCCCC--CceeecCcccCCCCCCCCCCCC-------CCCCcCCCCceEE
Q 012225 50 QVIAINGKFP----GAVLNATTNNNIVINVQNDLDE--SLLMTWPGIQMRRNSWQDGVQG-------TNCPIPSQWNWTY 116 (468)
Q Consensus 50 ~~~~~Ng~~P----gP~i~~~~Gd~v~v~v~N~l~~--~~siH~HG~~~~~~~~~DGv~~-------tq~~I~PG~~~~y 116 (468)
..++|||+.- .|.|++++|++++++..|.... .+.+|.|++.+. .||.+. ....|.||++++.
T Consensus 210 ~~~~ING~~~~~~~~~~l~v~~Ger~Rl~n~~~~~~~~~h~i~~h~~~Vi----~dG~~~~~p~~~~dtv~l~pGer~~v 285 (333)
T 1mzy_A 210 SHIVFNGAVGALTGEGALKAKVGDNVLFVHSQPNRDSRPHLIGGHGDLVW----ETGKFHNAPERDLETWFIRGGTAGAA 285 (333)
T ss_dssp SEEEETTSTTTTSGGGCEEEETTCEEEEEEEESSSCBCEEEETCCEEEEE----TTCCTTSCCEEEESBCCBCTTEEEEE
T ss_pred cEEEECCcccccCCCcceEecCCCEEEEEECCCCCccccEEECCCCeEEE----eCCcccCCCccCcceEEECCCceEEE
Confidence 5799999851 3679999999998887775432 345666766542 377642 2245899999999
Q ss_pred EEEeCCCceeeEEeeCccccc-cCCeeecEEEecCCC
Q 012225 117 QFQVKDQIGSFFYFPSLNLQR-VSGGFGPVIINNRKV 152 (468)
Q Consensus 117 ~f~~~~~~Gt~wyH~H~~~q~-~~Gl~G~liV~~~~~ 152 (468)
.+++ +++|.||||||...+. ..||.|.|.|+.+..
T Consensus 286 ~v~a-~~pG~y~~~ch~~~h~~~~Gm~~~~~v~~~~~ 321 (333)
T 1mzy_A 286 LYKF-LQPGVYAYVNHNLIEAVHKGATAHVLVEGEWD 321 (333)
T ss_dssp EEEC-CSCEEEEEEESSHHHHHTTCCEEEEEEESCCC
T ss_pred EEEc-CCCEEEEEecChhhhHhhCCCEEEEEEcCCCC
Confidence 9999 5799999999987664 789999999987553
No 86
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=98.68 E-value=3.3e-08 Score=83.34 Aligned_cols=76 Identities=12% Similarity=0.138 Sum_probs=53.5
Q ss_pred ceEEEecCCEEEEEEEeCCCCCceeecCcccCCCCCCCCCCCCCCCCcCCCCceEEEEEeCCCceeeEEeeCccccccCC
Q 012225 61 AVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQGTNCPIPSQWNWTYQFQVKDQIGSFFYFPSLNLQRVSG 140 (468)
Q Consensus 61 P~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~y~f~~~~~~Gt~wyH~H~~~q~~~G 140 (468)
+.|++++||+|++.++|. +|++..+.- ..-||. ....+.||++++|.| +.+|+|||||. .|...|
T Consensus 23 ~~i~V~~GDtVtf~n~~~---~H~v~~~~~-----~~P~g~--~~f~s~pGet~s~TF---~~pG~y~y~C~--~H~~~G 87 (127)
T 3tu6_A 23 AVIRAQPGDTVTFVAKDK---GHNSALMKG-----GAPEGA--ETWKGKINEEITVTL---SKPGVYMYQCA--PHVGMG 87 (127)
T ss_dssp SEEEECTTCEEEEECSSS---SCCCEECTT-----CSCTTC--CCCBCCTTCCCEEEC---CSCEEEEEECT--TTGGGT
T ss_pred CEEEECCCCEEEEEECCC---CceEEEccC-----cCCCCc--cceecCCCCEEEEEe---CCCeEEEEEeC--CCCcCC
Confidence 799999999977666553 444443321 011221 123457999998888 36999999998 466789
Q ss_pred eeecEEEecCC
Q 012225 141 GFGPVIINNRK 151 (468)
Q Consensus 141 l~G~liV~~~~ 151 (468)
|.|.|+|.++.
T Consensus 88 M~G~I~V~~~~ 98 (127)
T 3tu6_A 88 MIGAIVVGEPA 98 (127)
T ss_dssp CEEEEEESSCT
T ss_pred cEEEEEECcCC
Confidence 99999999754
No 87
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=98.66 E-value=4.5e-08 Score=81.98 Aligned_cols=75 Identities=9% Similarity=0.027 Sum_probs=54.0
Q ss_pred ceEEEecCCEEEEEEEeCCCCCceeecCcccCCCCCCCCCCCCCCCCcCCCCceEEEEEeCCCceeeEEeeCccccccCC
Q 012225 61 AVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQGTNCPIPSQWNWTYQFQVKDQIGSFFYFPSLNLQRVSG 140 (468)
Q Consensus 61 P~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~y~f~~~~~~Gt~wyH~H~~~q~~~G 140 (468)
..|++++||+|+. +|.. .+|++..+... .-+|. ....+.||++++|.|+ .+|+|||||- .|...|
T Consensus 22 ~~i~V~~GDTV~f--~n~~-~~Hnv~~~~~~-----~p~g~--~~~~~~pg~t~s~TF~---~~G~y~Y~C~--~H~~~G 86 (124)
T 3ef4_A 22 GFVKVEAGDTVKF--VPTD-KSHNAESVREV-----WPEGV--APVKGGFSKEVVFNAE---KEGLYVLKCA--PHYGMG 86 (124)
T ss_dssp SEEEECTTCEEEE--ECSS-SSCCCEECTTT-----SCTTS--CCCBCCTTCCEEEECC---SSEEEEEECT--TTGGGT
T ss_pred CEEEECCCCEEEE--EECC-CCccEEEeCCc-----CCCCc--cccccCCCCEEEEEeC---CCeEEEEEcC--CCCcCC
Confidence 6999999999754 4553 56666665221 11221 2244679999998883 6999999995 567789
Q ss_pred eeecEEEecC
Q 012225 141 GFGPVIINNR 150 (468)
Q Consensus 141 l~G~liV~~~ 150 (468)
|.|.|+|.++
T Consensus 87 M~G~I~V~~p 96 (124)
T 3ef4_A 87 MVVLVQVGKP 96 (124)
T ss_dssp CEEEEEESSC
T ss_pred CEEEEEECCC
Confidence 9999999874
No 88
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=98.65 E-value=7.5e-08 Score=95.47 Aligned_cols=98 Identities=15% Similarity=0.115 Sum_probs=73.0
Q ss_pred EEEEEcCcCC----CceEEEecCCEEEEEEEeCCCCC--ceeecCcccCCCCCCCCCCCC-------CCCCcCCCCceEE
Q 012225 50 QVIAINGKFP----GAVLNATTNNNIVINVQNDLDES--LLMTWPGIQMRRNSWQDGVQG-------TNCPIPSQWNWTY 116 (468)
Q Consensus 50 ~~~~~Ng~~P----gP~i~~~~Gd~v~v~v~N~l~~~--~siH~HG~~~~~~~~~DGv~~-------tq~~I~PG~~~~y 116 (468)
..++|||+.- -|.|++++|+++++...|..... +.+|.|++.+. .||... ....|.|||+++.
T Consensus 216 ~~~~iNG~~~~~~~~~~l~v~~G~r~Rl~n~~~~~~~~~~~i~gh~~~Vi----~dG~~~~~p~~~~dtv~l~pGer~~v 291 (340)
T 2bw4_A 216 THIVFNGAVGALTGDHALTAAVGERVLVVHSQANRDTRPHLIGGHGDYVW----ATGKFRNPPDLDQETWLIPGGTAGAA 291 (340)
T ss_dssp SEEEETTSTTTTSGGGCEEEETTCEEEEEEEESSSCBCEEEETCCEEEEE----TTCCTTSCCEEEESCCCBCTTEEEEE
T ss_pred CEEEECCccCCccCCCceEcCCCCEEEEEECCCCCccceEEecCcceEEe----CCCcccCCccccceEEEeCCCceEEE
Confidence 5799999863 38999999999988777754332 23444444332 366531 2245899999999
Q ss_pred EEEeCCCceeeEEeeCcc-ccccCCeeecEEEecCCC
Q 012225 117 QFQVKDQIGSFFYFPSLN-LQRVSGGFGPVIINNRKV 152 (468)
Q Consensus 117 ~f~~~~~~Gt~wyH~H~~-~q~~~Gl~G~liV~~~~~ 152 (468)
.|++ +++|.||||||.. .+...||.|.|.|+++..
T Consensus 292 ~v~~-~~pG~y~~~~h~~~~h~~~Gm~~~~~V~~~~~ 327 (340)
T 2bw4_A 292 FYTF-RQPGVYAYVNHNLIEAFELGAAGHFKVTGEWN 327 (340)
T ss_dssp EEEC-CSCEEEEEEESSHHHHHTTSCEEEEEEESCCC
T ss_pred EEEC-CCCeeeEEEcCchHHHHhCCCEEEEEECCCCc
Confidence 9999 4799999999987 477889999999997554
No 89
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=98.59 E-value=8.1e-08 Score=98.73 Aligned_cols=101 Identities=14% Similarity=0.168 Sum_probs=81.8
Q ss_pred EEEEEcCcCCC----ceEEEecCCEEEEEEEeCC-CCCceeecCcccCCCCCCCCCCCC-----CCCCcCCCCceEEEEE
Q 012225 50 QVIAINGKFPG----AVLNATTNNNIVINVQNDL-DESLLMTWPGIQMRRNSWQDGVQG-----TNCPIPSQWNWTYQFQ 119 (468)
Q Consensus 50 ~~~~~Ng~~Pg----P~i~~~~Gd~v~v~v~N~l-~~~~siH~HG~~~~~~~~~DGv~~-----tq~~I~PG~~~~y~f~ 119 (468)
..++|||+.-. |.|++++|++++++|.|.. ...+++|+||..... ...||.+. ....|.||++++..|+
T Consensus 189 ~~~liNG~~~~~~~~~~l~v~~G~~vrlrliN~~~~~~~~~~i~g~~~~v-i~~DG~~~~p~~~~~~~l~pg~r~~v~v~ 267 (442)
T 2zoo_A 189 DYVVFNGSVGSTTDENSLTAKVGETVRLYIGNGGPNLVSSFHVIGEIFDT-VYVEGGSLKNHNVQTTLIPAGGAAIVEFK 267 (442)
T ss_dssp SEEEETTSTTTTSGGGCEEEETTCEEEEEEEEEESSCCEEEEEETCCBSE-EEGGGSSCEECSBSEEEECTTEEEEEEEE
T ss_pred CEEEECCCcCCCCCCCceEeCCCCEEEEEEEeCCCCCceeeEEcCCEEEE-EecCCccCCCccceEEEECCCeeEEEEEE
Confidence 57899999643 6899999999999999975 467899999986543 45788642 2245899999999999
Q ss_pred eCCCceeeEEeeCcccc-ccCCeeecEEEecCCC
Q 012225 120 VKDQIGSFFYFPSLNLQ-RVSGGFGPVIINNRKV 152 (468)
Q Consensus 120 ~~~~~Gt~wyH~H~~~q-~~~Gl~G~liV~~~~~ 152 (468)
+ +++|+||+|||...+ ...|+.|.|.|...+.
T Consensus 268 ~-~~~G~y~~~~~~~~~~~~~g~~a~l~v~~~~~ 300 (442)
T 2zoo_A 268 V-EVPGTFILVDHSIFRAFNKGALAMLKVEGPDD 300 (442)
T ss_dssp C-CSCEEEEEEESSTHHHHTTSCEEEEEEESCCC
T ss_pred c-CCCCeEEEEecccccccccCceEEEEecCCCC
Confidence 9 579999999997665 4778999999987553
No 90
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=98.55 E-value=2.7e-07 Score=91.33 Aligned_cols=98 Identities=17% Similarity=0.218 Sum_probs=72.4
Q ss_pred EEEEEcCcCC----CceEEEecCCEEEEEEEeCCCC--CceeecCcccCCCCCCCCCCCC-------CCCCcCCCCceEE
Q 012225 50 QVIAINGKFP----GAVLNATTNNNIVINVQNDLDE--SLLMTWPGIQMRRNSWQDGVQG-------TNCPIPSQWNWTY 116 (468)
Q Consensus 50 ~~~~~Ng~~P----gP~i~~~~Gd~v~v~v~N~l~~--~~siH~HG~~~~~~~~~DGv~~-------tq~~I~PG~~~~y 116 (468)
..++|||+.. .|.|.+++|+++++...|.... .+.||.|++.+ +.||.+. ....|.||++++.
T Consensus 210 ~~~liNG~~~~~~~~~~l~v~~GervRlin~~~~~~~~~~~i~gh~~~V----i~DG~~~~p~~~~~dtv~i~pGer~dv 285 (336)
T 1oe1_A 210 SHIVFNGKVGALTGANALTAKVGETVLLIHSQANRDTRPHLIGGHGDWV----WETGKFANPPQRDLETWFIRGGSAGAA 285 (336)
T ss_dssp SEEEETTSTTTTSGGGCEEEETTCEEEEEEEESSSCBCEEETTCCEEEE----ETTCCTTSCCEEEESBCCBCTTEEEEE
T ss_pred CEEEECCeeccCCCCcceEcCCCCEEEEEecCCCCccceEEECCcCceE----eCCCcCcCCccccceEEEECCCCcEEE
Confidence 5799999963 3899999999988754444322 13345555433 2488742 1345899999999
Q ss_pred EEEeCCCceeeEEeeCcccc-ccCCeeecEEEecCCC
Q 012225 117 QFQVKDQIGSFFYFPSLNLQ-RVSGGFGPVIINNRKV 152 (468)
Q Consensus 117 ~f~~~~~~Gt~wyH~H~~~q-~~~Gl~G~liV~~~~~ 152 (468)
.+++. ++|+||||||...+ ...|+.|.|.|+++..
T Consensus 286 lv~~~-~pG~y~~~~h~~~~~~~~G~~~~~~V~~~~~ 321 (336)
T 1oe1_A 286 LYTFK-QPGVYAYLNHNLIEAFELGAAGHIKVEGKWN 321 (336)
T ss_dssp EEECC-SCEEEEEEESSHHHHHTTSCEEEEEEESCCC
T ss_pred EEEcC-CCceEEEEechhhccccCCCeEEEEECCCCC
Confidence 99994 79999999998655 4789999999997654
No 91
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=98.48 E-value=1.4e-07 Score=75.78 Aligned_cols=77 Identities=8% Similarity=0.026 Sum_probs=55.2
Q ss_pred CceEEEecCCEEEEEEEeCCCCCceeecCcccCCCCCCCCCCCC-----CCCCcCCCCceEEEEEeCCCceeeEEeeCcc
Q 012225 60 GAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQG-----TNCPIPSQWNWTYQFQVKDQIGSFFYFPSLN 134 (468)
Q Consensus 60 gP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~-----tq~~I~PG~~~~y~f~~~~~~Gt~wyH~H~~ 134 (468)
.+.|++++||+|++ +|.....|++....-. +-+|... ....+.||+++++.| +++|+|+|+|..
T Consensus 17 P~~i~v~~GdtV~~--~n~~~~~H~v~~~~~~-----~p~g~~~~~~~~~~~~~~~g~~~~~tf---~~~G~y~y~C~~- 85 (98)
T 1iuz_A 17 PSKISVAAGEAIEF--VNNAGFPHNIVFDEDA-----VPAGVDADAISYDDYLNSKGETVVRKL---STPGVYGVYCEP- 85 (98)
T ss_dssp SSEEEECTTCEEEE--EECSSCCEEEEECTTS-----SCTTCCHHHHCEEEEECSTTCEEEEEC---CSCEEEEEECTT-
T ss_pred CCEEEECCCCEEEE--EECCCCCEEEEEeCCC-----CccccccccccccccccCCCCEEEEEc---CCCEEEEEEchh-
Confidence 46999999998654 6886678887766421 1122210 113578999998887 379999999974
Q ss_pred ccccCCeeecEEEe
Q 012225 135 LQRVSGGFGPVIIN 148 (468)
Q Consensus 135 ~q~~~Gl~G~liV~ 148 (468)
|..+||.|.|+|+
T Consensus 86 -H~~~gM~G~I~V~ 98 (98)
T 1iuz_A 86 -HAGAGMKMTITVQ 98 (98)
T ss_dssp -TGGGTCEEEEEEC
T ss_pred -hccCCCEEEEEEC
Confidence 5667999999985
No 92
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=98.46 E-value=4.5e-07 Score=76.01 Aligned_cols=75 Identities=9% Similarity=0.092 Sum_probs=50.8
Q ss_pred ceEEEecCCEEEEEEEeCCCCCceeecCcccCCCCCCCCCCCCCCCCcCCCCceEEEEEeCCCceeeEEeeCccccccCC
Q 012225 61 AVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQGTNCPIPSQWNWTYQFQVKDQIGSFFYFPSLNLQRVSG 140 (468)
Q Consensus 61 P~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~y~f~~~~~~Gt~wyH~H~~~q~~~G 140 (468)
+.|++++||+|++ +|... +|++..+- ...-||.. .....||++++|.| +.+|+|+|+|. .|...|
T Consensus 21 ~~i~V~~GdtV~f--~~~~~-~H~v~~~~-----~~~p~~~~--~~~~~pG~t~~~tF---~~~G~y~y~C~--~H~~~g 85 (123)
T 1paz_A 21 AYIKANPGDTVTF--IPVDK-GHNVESIK-----DMIPEGAE--KFKSKINENYVLTV---TQPGAYLVKCT--PHYAMG 85 (123)
T ss_dssp SEEEECTTCEEEE--EESSS-SCCCEECT-----TCSCTTCC--CCBCCTTCCEEEEC---CSCEEEEEECT--TTGGGT
T ss_pred CEEEECCCCEEEE--EECCC-CeEEEEec-----ccCCCCcc--ceecCCCCEEEEEe---CCCEEEEEEeC--CcccCC
Confidence 6999999999755 55533 44444431 01112221 12346999988887 36999999996 466689
Q ss_pred eeecEEEecC
Q 012225 141 GFGPVIINNR 150 (468)
Q Consensus 141 l~G~liV~~~ 150 (468)
|.|.|+|.++
T Consensus 86 M~G~I~V~~~ 95 (123)
T 1paz_A 86 MIALIAVGDS 95 (123)
T ss_dssp CEEEEEESSS
T ss_pred CEEEEEEcCC
Confidence 9999999874
No 93
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=98.42 E-value=5.4e-07 Score=76.09 Aligned_cols=92 Identities=10% Similarity=-0.005 Sum_probs=61.7
Q ss_pred cCCCceEEEecC-CEEEEEEEeCCCCC-----ceeec--CcccC-------C-C-----CCCCCCCCC-CCCCcCCCCce
Q 012225 57 KFPGAVLNATTN-NNIVINVQNDLDES-----LLMTW--PGIQM-------R-R-----NSWQDGVQG-TNCPIPSQWNW 114 (468)
Q Consensus 57 ~~PgP~i~~~~G-d~v~v~v~N~l~~~-----~siH~--HG~~~-------~-~-----~~~~DGv~~-tq~~I~PG~~~ 114 (468)
+|--..|.|++| |+|+|+++|....+ |.+-+ +|..+ . + .+..|..-. ...-|.||+++
T Consensus 14 ~F~p~~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~pGet~ 93 (129)
T 1cuo_A 14 TYSTRSISVPASCAEFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGGGEKT 93 (129)
T ss_dssp CCSCSEEEEETTCSEEEEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCTTCEE
T ss_pred eEccCeEEEcCCCeEEEEEEEECCCCcccccccceEEecCcchhhhHHHhhhccccccccccccccceeeeeEECCCCEE
Confidence 343358999999 99999999987543 44322 22100 0 0 001111111 22358999999
Q ss_pred EEEEEeC--CCceeeEEeeCccccccCCeeecEEEec
Q 012225 115 TYQFQVK--DQIGSFFYFPSLNLQRVSGGFGPVIINN 149 (468)
Q Consensus 115 ~y~f~~~--~~~Gt~wyH~H~~~q~~~Gl~G~liV~~ 149 (468)
++.|+++ .++|+|||.|-...|.. ||.|.|+|.+
T Consensus 94 svtf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~~ 129 (129)
T 1cuo_A 94 SVKFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKLEE 129 (129)
T ss_dssp EEEEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEEEC
T ss_pred EEEEeccccCCCceEEEEeCCCCchH-cCEEEEEEeC
Confidence 9999984 37999999998777776 8999999974
No 94
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=98.37 E-value=7.8e-07 Score=74.54 Aligned_cols=75 Identities=12% Similarity=0.098 Sum_probs=51.2
Q ss_pred ceEEEecCCEEEEEEEeCCCCCceeecCcccCCCCCCCCCCCCCCCCcCCCCceEEEEEeCCCceeeEEeeCccccccCC
Q 012225 61 AVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQGTNCPIPSQWNWTYQFQVKDQIGSFFYFPSLNLQRVSG 140 (468)
Q Consensus 61 P~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~y~f~~~~~~Gt~wyH~H~~~q~~~G 140 (468)
+.|++++||+|+ ++|... +|++..+. ...-||. ....+.||++++|.| +.+|+|+|+|. .|...|
T Consensus 21 ~~i~V~~GdtV~--f~n~~~-~H~v~~~~-----~~~p~~~--~~~~~~pG~t~~~tF---~~~G~y~y~C~--~H~~~g 85 (123)
T 1pmy_A 21 ALVRLKPGDSIK--FLPTDK-GHNVETIK-----GMAPDGA--DYVKTTVGQEAVVKF---DKEGVYGFKCA--PHYMMG 85 (123)
T ss_dssp SEEEECTTCEEE--EECSSS-SCCCEECT-----TSSCTTC--CCCBCCTTSCEEEEC---CSCEEEEEECS--TTTTTT
T ss_pred CEEEECCCCEEE--EEECCC-CcEEEEec-----ccCCCCc--cceecCCCCEEEEEe---CCCeEEEEEeC--CccccC
Confidence 699999999965 555533 44444331 0111221 123357999988888 36999999997 466689
Q ss_pred eeecEEEecC
Q 012225 141 GFGPVIINNR 150 (468)
Q Consensus 141 l~G~liV~~~ 150 (468)
|.|.|+|.++
T Consensus 86 M~G~I~V~~~ 95 (123)
T 1pmy_A 86 MVALVVVGDK 95 (123)
T ss_dssp CEEEEEESSC
T ss_pred CEEEEEEcCC
Confidence 9999999864
No 95
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=98.34 E-value=1.7e-06 Score=75.99 Aligned_cols=97 Identities=8% Similarity=-0.024 Sum_probs=64.0
Q ss_pred EEEcC--cCCCceEEE-ecCCEEEEEEEeCCCCC-----ceeec--Ccc---------cCC---CCCCCCCCCC-CCCCc
Q 012225 52 IAING--KFPGAVLNA-TTNNNIVINVQNDLDES-----LLMTW--PGI---------QMR---RNSWQDGVQG-TNCPI 108 (468)
Q Consensus 52 ~~~Ng--~~PgP~i~~-~~Gd~v~v~v~N~l~~~-----~siH~--HG~---------~~~---~~~~~DGv~~-tq~~I 108 (468)
+..++ +|--..|.| +.||+|+|+|+|....+ |.+-+ +|. ..- --+..|..-. ...-|
T Consensus 47 I~~~d~m~F~P~~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l 126 (167)
T 3ay2_A 47 VESNDNMQFNTKDIQVSKACKEFTITLKHTGTQPKASMGHNLVIAKAEDMDGVFKDGVGAADTDYVKPDDARVVAHTKLI 126 (167)
T ss_dssp EEECTTSCBSCSEEEEETTCSSEEEEEEECSCSCHHHHCBCCEEEEGGGHHHHHHHHGGGGGGTTSCTTCTTEEEECCCB
T ss_pred EEeCCCceEecceEEEecCCCEEEEEEEECCCCccccccceEEeccCcchhhhHHHhhhccccccccccccchhccceee
Confidence 44453 454458999 99999999999997653 43322 221 000 0000111111 23458
Q ss_pred CCCCceEEEEEeC-CCceeeEEeeCccccccCCeeecEEEec
Q 012225 109 PSQWNWTYQFQVK-DQIGSFFYFPSLNLQRVSGGFGPVIINN 149 (468)
Q Consensus 109 ~PG~~~~y~f~~~-~~~Gt~wyH~H~~~q~~~Gl~G~liV~~ 149 (468)
.||+++++.|+++ -++|+|||+|-.-.|.. ||.|.|+|.+
T Consensus 127 ~pGet~svtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~~ 167 (167)
T 3ay2_A 127 GGGEESSLTLDPAKLADGDYKFACTFPGHGA-LMNGKVTLVD 167 (167)
T ss_dssp CTTCEEEEEECGGGGTTSCEEEECCSTTGGG-TSEEEEEEEC
T ss_pred CCCCEEEEEEecCCCCCcEEEEEcCCCCchh-cCEEEEEEeC
Confidence 9999999999984 16999999998766766 8999999974
No 96
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=98.28 E-value=4.9e-06 Score=67.76 Aligned_cols=77 Identities=14% Similarity=0.135 Sum_probs=53.6
Q ss_pred CcCCCceEEEecCCEEEEEEEeCCCCCceeecCcccCCCCCCCCCCCC-CCCCcCCCCceEEEEEeCCCceeeEEeeCcc
Q 012225 56 GKFPGAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQG-TNCPIPSQWNWTYQFQVKDQIGSFFYFPSLN 134 (468)
Q Consensus 56 g~~PgP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~-tq~~I~PG~~~~y~f~~~~~~Gt~wyH~H~~ 134 (468)
..|--..|++++||+|++ +|.....|++...... .|... ....+.||+++++.| +++|+|+|+|-.
T Consensus 29 ~~F~P~~i~V~~G~tV~~--~N~d~~~H~v~~~~~~-------~~~~~~~s~~l~~g~~~~~tf---~~~G~y~~~C~~- 95 (106)
T 1id2_A 29 MKYLTPEVTIKAGETVYW--VNGEVMPHNVAFKKGI-------VGEDAFRGEMMTKDQAYAITF---NEAGSYDYFCTP- 95 (106)
T ss_dssp TEESSSEEEECTTCEEEE--EECSSSCBCCEECTTT-------SSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSS-
T ss_pred cEEeCCEEEECCCCEEEE--EECCCCcEEEEEeCCC-------CCcccccccccCCCCEEEEEe---CCCEEEEEEeCC-
Confidence 344346999999999765 5887666666654321 11111 223578999999888 369999999975
Q ss_pred ccccCCeeecEEEe
Q 012225 135 LQRVSGGFGPVIIN 148 (468)
Q Consensus 135 ~q~~~Gl~G~liV~ 148 (468)
|. ||.|.|+|+
T Consensus 96 -H~--~M~G~I~V~ 106 (106)
T 1id2_A 96 -HP--FMRGKVIVE 106 (106)
T ss_dssp -CT--TCEEEEEEC
T ss_pred -CC--CCEEEEEEC
Confidence 22 999999984
No 97
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=98.22 E-value=4.5e-06 Score=85.95 Aligned_cols=93 Identities=15% Similarity=0.144 Sum_probs=66.3
Q ss_pred CCceE--EEEEEcCcCCCceEEEecCCEEEEEEEeCC---CCCceeecCcccCCCCCCCCCCCCCCCCcCCCCceEEEEE
Q 012225 45 LGVPQ--QVIAINGKFPGAVLNATTNNNIVINVQNDL---DESLLMTWPGIQMRRNSWQDGVQGTNCPIPSQWNWTYQFQ 119 (468)
Q Consensus 45 dG~~~--~~~~~Ng~~PgP~i~~~~Gd~v~v~v~N~l---~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~y~f~ 119 (468)
+|... .+...+-.|-.+.|++++||+|++.++|.. +..|+....++ | ....+.||++.++.|+
T Consensus 540 dGnkV~V~Mta~~~~FsP~eI~VP~GdtVrfiLTN~D~veDViHSF~IPsl---------G---IK~DaiPGrtnsvtFt 607 (638)
T 3sbq_A 540 DGNKVRVYMTSMAPAFGVQEFTVKQGDEVTVTITNIDQIEDVSHGFVVVNH---------G---VSMEISPQQTSSITFV 607 (638)
T ss_dssp ETTEEEEEEEEETTEESCCEEEEETTCEEEEEEEECCCSTTCCEEEEETTT---------T---EEEEECTTCEEEEEEE
T ss_pred CCceEEEEEEEEcccccCCEEEEecCceeEEEEecCCcCCCceeeeEecCC---------C---ceeeeCCCCeEEEEEE
Confidence 45433 445556667667999999999999999974 34444333222 1 1234789999999999
Q ss_pred eCCCceeeEEeeCcc-ccccCCeeecEEEecC
Q 012225 120 VKDQIGSFFYFPSLN-LQRVSGGFGPVIINNR 150 (468)
Q Consensus 120 ~~~~~Gt~wyH~H~~-~q~~~Gl~G~liV~~~ 150 (468)
+ +++|+|||+|+.- ...-.+|.|.|+|+++
T Consensus 608 a-dkPGvY~y~CSE~CGa~Hs~M~G~ViVEPa 638 (638)
T 3sbq_A 608 A-DKPGLHWYYCSWFCHALHMEMVGRMMVEPA 638 (638)
T ss_dssp C-CSCEEEEEECCSCCSTTCTTCEEEEEEECC
T ss_pred c-CCCEEEEEECCCcCCCCcccceEEEEEecC
Confidence 9 6899999999841 2222579999999974
No 98
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=98.21 E-value=6.1e-06 Score=69.56 Aligned_cols=92 Identities=10% Similarity=0.016 Sum_probs=60.0
Q ss_pred cCCCceEEE-ecCCEEEEEEEeCCCCC-----ceeec--Cc---------cc----CCCCCCCCCCCC-CCCCcCCCCce
Q 012225 57 KFPGAVLNA-TTNNNIVINVQNDLDES-----LLMTW--PG---------IQ----MRRNSWQDGVQG-TNCPIPSQWNW 114 (468)
Q Consensus 57 ~~PgP~i~~-~~Gd~v~v~v~N~l~~~-----~siH~--HG---------~~----~~~~~~~DGv~~-tq~~I~PG~~~ 114 (468)
+|--..|.| ++||+|+|+++|....+ |.+-+ +| +. ..-.+..|..-. ...-|.||+++
T Consensus 14 ~F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pGet~ 93 (129)
T 2ccw_A 14 QYNVKEIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGGGESD 93 (129)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred cEecceEEEecCCCEEEEEEEECCCcccccCcceEEEcCccchhhhHHHhhhhcccccccccccccceeeeeEECCCCEE
Confidence 343358999 99999999999997653 44332 11 00 000011121111 22358999999
Q ss_pred EEEEEeC-CCcee-eEEeeCccccccCCeeecEEEec
Q 012225 115 TYQFQVK-DQIGS-FFYFPSLNLQRVSGGFGPVIINN 149 (468)
Q Consensus 115 ~y~f~~~-~~~Gt-~wyH~H~~~q~~~Gl~G~liV~~ 149 (468)
++.|+++ -++|+ |||.|-...|.. ||.|.|+|.+
T Consensus 94 svtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~~ 129 (129)
T 2ccw_A 94 SVTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKLGS 129 (129)
T ss_dssp EEEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEECC
T ss_pred EEEEeccccCCCceEEEEeCCCChhH-cCEEEEEEeC
Confidence 9999984 03655 999998767766 8999999963
No 99
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=98.17 E-value=6.9e-06 Score=69.10 Aligned_cols=91 Identities=11% Similarity=0.035 Sum_probs=60.0
Q ss_pred cCCCceEEE-ecCCEEEEEEEeCCCCC-----ceeec--Cc---------ccC----CCCCCCCCCCC-CCCCcCCCCce
Q 012225 57 KFPGAVLNA-TTNNNIVINVQNDLDES-----LLMTW--PG---------IQM----RRNSWQDGVQG-TNCPIPSQWNW 114 (468)
Q Consensus 57 ~~PgP~i~~-~~Gd~v~v~v~N~l~~~-----~siH~--HG---------~~~----~~~~~~DGv~~-tq~~I~PG~~~ 114 (468)
+|--..|.| +.||+|+|+++|....+ |.+-+ .| +.. .--+..|..-. ....|.||+++
T Consensus 14 ~F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGet~ 93 (128)
T 1nwp_A 14 SFNTKDIAIDKSCKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGEKD 93 (128)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred cEecCEEEEecCCCEEEEEEEECCCCcccCCCceEEEccccchhhHHHHHhhccccccccccccchhheeeeeeCCCCEE
Confidence 444458999 99999999999997653 54333 11 110 00000111111 22348999999
Q ss_pred EEEEEeCC-Ccee-eEEeeCccccccCCeeecEEEe
Q 012225 115 TYQFQVKD-QIGS-FFYFPSLNLQRVSGGFGPVIIN 148 (468)
Q Consensus 115 ~y~f~~~~-~~Gt-~wyH~H~~~q~~~Gl~G~liV~ 148 (468)
++.|+++. .+|+ |||.|-...|.. ||.|.|+|.
T Consensus 94 svtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 128 (128)
T 1nwp_A 94 SVTFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTLK 128 (128)
T ss_dssp EEEEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEEC
T ss_pred EEEEeccccCCCceEEEEECCCChhH-CCEEEEEEC
Confidence 99999840 4776 999998777776 899999984
No 100
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=98.16 E-value=8e-06 Score=68.71 Aligned_cols=92 Identities=13% Similarity=0.060 Sum_probs=61.1
Q ss_pred cCCCceEEE-ecCCEEEEEEEeCCCCC-----ceeecCc-----------cc----CCCCCCCCCCCC-CCCCcCCCCce
Q 012225 57 KFPGAVLNA-TTNNNIVINVQNDLDES-----LLMTWPG-----------IQ----MRRNSWQDGVQG-TNCPIPSQWNW 114 (468)
Q Consensus 57 ~~PgP~i~~-~~Gd~v~v~v~N~l~~~-----~siH~HG-----------~~----~~~~~~~DGv~~-tq~~I~PG~~~ 114 (468)
+|--..|.| +.||+|+|+++|....+ |.+-+=. +. ..--+..|..-. ...-|.||+++
T Consensus 13 ~F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGes~ 92 (128)
T 2iaa_C 13 QFNTKSIVVDKTCKEFTINLKHTGKLPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYVKAGDERVIAHTSVIGGGETD 92 (128)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSCSCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred eEecCEEEEecCCcEEEEEEEECCCCcccCCCceEEEccccchhhHHHhhhhccccccccccccchhhccceeeCCCCEE
Confidence 444468999 99999999999997654 5443211 10 000011121111 22357999999
Q ss_pred EEEEEeCC-Ccee-eEEeeCccccccCCeeecEEEec
Q 012225 115 TYQFQVKD-QIGS-FFYFPSLNLQRVSGGFGPVIINN 149 (468)
Q Consensus 115 ~y~f~~~~-~~Gt-~wyH~H~~~q~~~Gl~G~liV~~ 149 (468)
++.|+++. ++|+ |+|.|....|.. ||.|.|+|.+
T Consensus 93 ~vtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~~ 128 (128)
T 2iaa_C 93 SVTFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIELGS 128 (128)
T ss_dssp EEEEESSCCCTTCCEEEECCSTTCTT-TSEEEEEECC
T ss_pred EEEEeccccCCCceEEEEECCCChhH-CCEEEEEEeC
Confidence 99999841 4885 999998777776 8999999963
No 101
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=98.12 E-value=7.2e-06 Score=68.49 Aligned_cols=73 Identities=12% Similarity=0.040 Sum_probs=49.2
Q ss_pred ceEEEecCCEEEEEEEeCCCCCceeecCcccCCCCCCCCCCCCCCCCcCCCCceEEEEEeCCCceeeEEeeCccccccCC
Q 012225 61 AVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQGTNCPIPSQWNWTYQFQVKDQIGSFFYFPSLNLQRVSG 140 (468)
Q Consensus 61 P~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~y~f~~~~~~Gt~wyH~H~~~q~~~G 140 (468)
+.|++++||+|++ +|... .|+++...- ..-+|. ....+.||++++|.| +++|+|||+|-. |..
T Consensus 21 ~~i~V~~GdtV~f--~n~d~-~H~v~~~~~-----~~p~~~--~~~~~~~g~t~~~tF---~~~G~y~y~C~~--H~~-- 83 (122)
T 2ux6_A 21 ASLKVAPGDTVTF--IPTDK-GHNVETIKG-----MIPDGA--EAFKSKINENYKVTF---TAPGVYGVKCTP--HPF-- 83 (122)
T ss_dssp SEEEECTTEEEEE--EESSS-SCCCEECTT-----CSCTTC--CCCBCCTTCCEEEEE---CSCEEEEEEETT--EEE--
T ss_pred CEEEECCCCEEEE--EECCC-CcEEEEccc-----ccCCCc--ceeecCCCCEEEEEe---CCCEEEEEEeCC--Ccc--
Confidence 6999999998655 56643 444444321 111221 123457999998888 369999999975 332
Q ss_pred eeecEEEecC
Q 012225 141 GFGPVIINNR 150 (468)
Q Consensus 141 l~G~liV~~~ 150 (468)
|.|.|+|.+.
T Consensus 84 M~G~I~V~~~ 93 (122)
T 2ux6_A 84 MVGVVQVGDA 93 (122)
T ss_dssp EEEEEEESSS
T ss_pred CEEEEEEeCC
Confidence 9999999874
No 102
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=97.59 E-value=0.00031 Score=58.25 Aligned_cols=88 Identities=11% Similarity=0.085 Sum_probs=56.6
Q ss_pred cCCCceEEEec-CCEEEEEEEeCCCCC-----cee-----------ecCcccCC-C---CCCCCCCCC-CCCCcCCCCce
Q 012225 57 KFPGAVLNATT-NNNIVINVQNDLDES-----LLM-----------TWPGIQMR-R---NSWQDGVQG-TNCPIPSQWNW 114 (468)
Q Consensus 57 ~~PgP~i~~~~-Gd~v~v~v~N~l~~~-----~si-----------H~HG~~~~-~---~~~~DGv~~-tq~~I~PG~~~ 114 (468)
+|--..|.|+. |++|+|+|+|....+ |.+ +--|+..- . -+..|..-. ...-|.||+++
T Consensus 14 ~F~p~~i~V~~~Ge~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGes~ 93 (125)
T 3fsa_A 14 QFNTNAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKD 93 (125)
T ss_dssp CBSCSEEEECTTCSEEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTCEE
T ss_pred EEecCEEEEecCCCEEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccceeCCCcEE
Confidence 34456999986 999999999998543 321 11122110 0 011122222 22348999999
Q ss_pred EEEEEeC--CCceeeEEeeCccccccCCeeecEEEe
Q 012225 115 TYQFQVK--DQIGSFFYFPSLNLQRVSGGFGPVIIN 148 (468)
Q Consensus 115 ~y~f~~~--~~~Gt~wyH~H~~~q~~~Gl~G~liV~ 148 (468)
+..|+.+ .++|+|.|.|. .|. ||.|.|+|.
T Consensus 94 ~vtf~~~~l~~~G~y~f~C~--gH~--~M~G~v~V~ 125 (125)
T 3fsa_A 94 SVTFDVSKLKEGEQYMFFCA--AHA--AMKGTLTLK 125 (125)
T ss_dssp EEEEEGGGC---CCEEEECS--SST--TCEEEEEEC
T ss_pred EEEEeCcCcCCCccEEEEcC--CCC--CcEEEEEEC
Confidence 9999986 26999999999 555 899999984
No 103
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=97.18 E-value=0.0018 Score=54.82 Aligned_cols=73 Identities=12% Similarity=0.182 Sum_probs=53.0
Q ss_pred ceEEEecCCEEEEEEEeCCCCCceeecCcccCCCCCCCCCCCCCCCCcCCCCceEEEEEeCCCceeeEEeeCc--c-ccc
Q 012225 61 AVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQGTNCPIPSQWNWTYQFQVKDQIGSFFYFPSL--N-LQR 137 (468)
Q Consensus 61 P~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~y~f~~~~~~Gt~wyH~H~--~-~q~ 137 (468)
..|+++.|++|++.++|. +..+++-.-++ | -+.-+.||+..++.|++ +++|+|+|+|.. + .|
T Consensus 60 ~~l~Vp~G~~V~~~vts~-DV~Hsf~ip~~---------~---~k~d~~PG~~~~~~~~~-~~~G~y~~~C~e~CG~~H- 124 (135)
T 2cua_A 60 NPIEVPQGAEIVFKITSP-DVIHGFHVEGT---------N---INVEVLPGEVSTVRYTF-KRPGEYRIICNQYCGLGH- 124 (135)
T ss_dssp SSEEEETTSEEEEEEEBS-SSCEEEEETTS---------S---CEEEECBTBCEEEEEEC-CSCEEEEEECCSCCSTTS-
T ss_pred CEEEEcCCCEEEEEEEeC-CccceEEecCC---------C---ceeEeCCCCcEEEEEEc-CCCEEEEEECcccCCCCc-
Confidence 489999999999999997 34333322211 1 12336899999999998 689999999963 2 33
Q ss_pred cCCeeecEEEec
Q 012225 138 VSGGFGPVIINN 149 (468)
Q Consensus 138 ~~Gl~G~liV~~ 149 (468)
.+|.|.++|.+
T Consensus 125 -~~M~g~v~V~~ 135 (135)
T 2cua_A 125 -QNMFGTIVVKE 135 (135)
T ss_dssp -TTCEEEEEEEC
T ss_pred -CCCEEEEEEEC
Confidence 47999998864
No 104
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=97.05 E-value=0.0012 Score=56.15 Aligned_cols=78 Identities=15% Similarity=0.190 Sum_probs=50.1
Q ss_pred cceEEEEcCCCEEEEEEEEcCCCCeeeEEEeCCeeEEEE---eeC-------cccc----ceeeceEEEcCCceEEEEEE
Q 012225 215 EYETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVE---TEG-------HYTS----QQNYTSFEIHVGQSYSFLVT 280 (468)
Q Consensus 215 ~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~Via---~DG-------~~~~----p~~~d~i~l~pGqR~dv~v~ 280 (468)
.+..|++++|++++|+|.|.+....|.|.+.+....+.+ .|+ .++. ....++..|.|||++++.++
T Consensus 33 ~p~~i~v~~G~~V~~~~~N~~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~t~~l~pGet~~v~f~ 112 (139)
T 2aan_A 33 DKTELTVSAGQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPADKSNIIAESPLANGNETVEVTFT 112 (139)
T ss_dssp SCSEEEECTTCEEEEEEECCCSSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSCCTTEEEECCCBCTTCEEEEEEE
T ss_pred cCCeEEECCCCEEEEEEEeCCCCCCeeEEEeccccccchhhhhhhhcccccccccCcccccccccccccCCCCEEEEEEE
Confidence 357899999999999999988652244444432210000 010 1221 12245677999999999999
Q ss_pred ecCCCCcceEEEEE
Q 012225 281 MDQNASSDYYIVAS 294 (468)
Q Consensus 281 ~~~~~g~~y~i~~~ 294 (468)
++ .+| .|++...
T Consensus 113 ~~-~pG-~y~f~C~ 124 (139)
T 2aan_A 113 AP-AAG-TYLYICT 124 (139)
T ss_dssp CC-SSE-EEEEECC
T ss_pred CC-CCe-EEEEEcC
Confidence 87 467 8988764
No 105
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=97.00 E-value=0.003 Score=55.27 Aligned_cols=75 Identities=12% Similarity=0.143 Sum_probs=55.5
Q ss_pred ceEEEecCCEEEEEEEeCCCCCceeecCcccCCCCCCCCCCCCCCCCcCCCCceEEEEEeCCCceeeEEeeCc-cccccC
Q 012225 61 AVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQGTNCPIPSQWNWTYQFQVKDQIGSFFYFPSL-NLQRVS 139 (468)
Q Consensus 61 P~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~y~f~~~~~~Gt~wyH~H~-~~q~~~ 139 (468)
..|+++.|++|++.++|. +..|+...-++. -+.-+.||+...+.|++ +++|+|++.|.. -...-.
T Consensus 93 n~l~VP~G~~Vr~~vTS~-DViHsf~IP~lg------------ik~da~PG~~n~~~~~~-~kpG~y~g~Cse~CG~~Hs 158 (168)
T 3s8f_B 93 NPIEVPQGAEIVFKITSP-DVIHGFHVEGTN------------INVEVLPGEVSTVRYTF-KRPGEYRIICNQYCGLGHQ 158 (168)
T ss_dssp SSEEEETTSEEEEEEECS-SSCEEEEETTSS------------CEEEECTTBCEEEEEEC-CSCEEEEEECCSCCSTTGG
T ss_pred CEEEEeCCCeEEEEEecC-CceEEEEECCCC------------eEEEecCCceeEEEEEe-CCCEEEEEECCcCCCCCcC
Confidence 589999999999999997 544444332221 12235799999999998 689999999983 333345
Q ss_pred CeeecEEEec
Q 012225 140 GGFGPVIINN 149 (468)
Q Consensus 140 Gl~G~liV~~ 149 (468)
+|.|-++|++
T Consensus 159 ~M~g~V~V~e 168 (168)
T 3s8f_B 159 NMFGTIVVKE 168 (168)
T ss_dssp GCEEEEEEEC
T ss_pred CCEEEEEEeC
Confidence 7999999974
No 106
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=96.78 E-value=0.00097 Score=53.50 Aligned_cols=73 Identities=16% Similarity=0.225 Sum_probs=50.7
Q ss_pred ceEEEEcCCCEEEEEEEEcCCCCeeeEEEeCCeeEEEEeeCccccceeeceEEEcCCceEEEEEEecCCCCcceEEEEE
Q 012225 216 YETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYTSQQNYTSFEIHVGQSYSFLVTMDQNASSDYYIVAS 294 (468)
Q Consensus 216 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~Via~DG~~~~p~~~d~i~l~pGqR~dv~v~~~~~~g~~y~i~~~ 294 (468)
++.|++++|++++| +|.+.. .+.+++++..+.. .+|..-.....++..|.||+++++.+++++.+| .||...+
T Consensus 18 p~~i~v~~Gd~V~~--~N~~~~-~H~v~~~~~~~~~--~~g~~~~~~~~~~~~i~pG~~~~~~f~~~~~~G-~y~y~C~ 90 (105)
T 3cvb_A 18 PANVTVHPGDTVKW--VNNKLP-PHNILFDDKQVPG--ASKELADKLSHSQLMFSPGESYEITFSSDFPAG-TYTYYCA 90 (105)
T ss_dssp SSEEEECTTEEEEE--EECSSC-CEEEEECTTSSGG--GCHHHHHHHCEEEEECSTTCEEEEEECTTSCSE-EEEEECT
T ss_pred CCEEEEcCCCEEEE--EECCCC-CCeEEEeCCCCCc--ccccccccccccccccCCCCeEEEEEecCCCCe-eEEEEeC
Confidence 57899999999865 688654 5899998865432 111111111245688999999999887744678 9999765
No 107
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=96.66 E-value=0.0055 Score=49.78 Aligned_cols=60 Identities=27% Similarity=0.313 Sum_probs=47.4
Q ss_pred ceEEEEcCCCEEEEEEEEcCCCCeeeEEEeCCeeEEEEeeCccccceeeceEEEcCCceEEEEEEecCCCCcceEEEEE
Q 012225 216 YETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYTSQQNYTSFEIHVGQSYSFLVTMDQNASSDYYIVAS 294 (468)
Q Consensus 216 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~Via~DG~~~~p~~~d~i~l~pGqR~dv~v~~~~~~g~~y~i~~~ 294 (468)
++.+++++|++++|++.|.... .|.|.+.+.. -...+.||+++++.++++ .+| .|+...+
T Consensus 37 p~~i~v~~G~~V~~~~~n~d~~-~H~~~i~~~~----------------~~~~i~pG~~~~~~f~~~-~~G-~y~~~C~ 96 (112)
T 1iby_A 37 PETLVVKKGDAVKVVVENKSPI-SEGFSIDAFG----------------VQEVIKAGETKTISFTAD-KAG-AFTIWCQ 96 (112)
T ss_dssp SCEEEEETTCEEEEEEEECSSS-CEEEEEGGGT----------------EEEEECTTCEEEEEEECC-SCE-EEEEBCS
T ss_pred CCEEEEeCCCEEEEEEEECCCC-eEEEEEcCCC----------------ceeEeCCCCEEEEEEECC-CCE-EEEEECC
Confidence 4789999999999999999864 4666665431 146799999999999887 568 8998654
No 108
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=96.00 E-value=0.019 Score=45.53 Aligned_cols=59 Identities=17% Similarity=0.307 Sum_probs=46.1
Q ss_pred ceEEEEcCCCEEEEEEEEcCCCCeeeEEEeCCeeEEEEeeCccccceeeceEEEcCCceEEEEEEecCCCCcceEEEE
Q 012225 216 YETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYTSQQNYTSFEIHVGQSYSFLVTMDQNASSDYYIVA 293 (468)
Q Consensus 216 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~Via~DG~~~~p~~~d~i~l~pGqR~dv~v~~~~~~g~~y~i~~ 293 (468)
+..|++++|++++|++.|.+.. .|.|.+++... ...+.||+..++.++++ .+| .|....
T Consensus 27 P~~i~v~~G~tV~~~~~n~d~~-~H~~~~~~~~~----------------~~~~~pg~~~~~~~t~~-~~G-~Y~y~C 85 (100)
T 4hci_A 27 PNVITIPINESTTLLLKNKGKS-EHTFTIKKLGI----------------DVVVESGKEKNITVKPK-SAG-TYELIC 85 (100)
T ss_dssp SSEEEECTTSCEEEEEEECSSS-CEEEEEGGGTE----------------EEEECTTCEEEEEECCC-SCE-EEEEEC
T ss_pred CCEEEECCCCEEEEEEEcCCCc-eEEEEEecCCc----------------ceeecCCcceeEEEecc-cCc-eEEEEC
Confidence 4689999999999999998865 36666654432 24578999999999888 467 898865
No 109
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=95.71 E-value=0.01 Score=49.66 Aligned_cols=77 Identities=18% Similarity=0.238 Sum_probs=48.8
Q ss_pred ceEEEE-cCCCEEEEEEEEcCCCC----eeeEEEeCCe-eEEEEe-------eCcccccee----eceEEEcCCceEEEE
Q 012225 216 YETINV-DPGKTYRVRVHNVGTST----SLNFRIQNHN-LLLVET-------EGHYTSQQN----YTSFEIHVGQSYSFL 278 (468)
Q Consensus 216 ~~~~~v-~~G~~~rlRliN~~~~~----~~~~~i~gh~-~~Via~-------DG~~~~p~~----~d~i~l~pGqR~dv~ 278 (468)
+..|+| ++|++++|.+.|.+... .|.|.|.... +.-++. +-.++.+.. ..+-.|+|||++++.
T Consensus 17 p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pGet~svt 96 (129)
T 2ccw_A 17 VKEIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGGGESDSVT 96 (129)
T ss_dssp CSEEEECTTCSEEEEEEEECSCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEEEEE
T ss_pred cceEEEecCCCEEEEEEEECCCcccccCcceEEEcCccchhhhHHHhhhhcccccccccccccceeeeeEECCCCEEEEE
Confidence 478999 99999999999998763 3555554321 000000 112221111 123358999999999
Q ss_pred EEec--CCCCcceEEEE
Q 012225 279 VTMD--QNASSDYYIVA 293 (468)
Q Consensus 279 v~~~--~~~g~~y~i~~ 293 (468)
++++ ++++ +|+...
T Consensus 97 f~~~~l~~G~-~Y~f~C 112 (129)
T 2ccw_A 97 FDVSKIAAGE-NYAYFC 112 (129)
T ss_dssp EEGGGSCTTC-CEEEEC
T ss_pred EeccccCCCc-eEEEEe
Confidence 9987 5555 799865
No 110
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=95.55 E-value=0.013 Score=49.01 Aligned_cols=78 Identities=19% Similarity=0.309 Sum_probs=49.0
Q ss_pred ceEEEE-cCCCEEEEEEEEcCCCC----eeeEEEeCCe-eEEEEeeC-------cccccee----eceEEEcCCceEEEE
Q 012225 216 YETINV-DPGKTYRVRVHNVGTST----SLNFRIQNHN-LLLVETEG-------HYTSQQN----YTSFEIHVGQSYSFL 278 (468)
Q Consensus 216 ~~~~~v-~~G~~~rlRliN~~~~~----~~~~~i~gh~-~~Via~DG-------~~~~p~~----~d~i~l~pGqR~dv~ 278 (468)
+..|+| ++|++++|.+.|.+... .|.|.+.... +.-++.|| .++.+.. ..+-.|+|||++++.
T Consensus 17 p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGet~svt 96 (128)
T 1nwp_A 17 TKDIAIDKSCKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGEKDSVT 96 (128)
T ss_dssp CSEEEECTTCSEEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTCEEEEE
T ss_pred cCEEEEecCCCEEEEEEEECCCCcccCCCceEEEccccchhhHHHHHhhccccccccccccchhheeeeeeCCCCEEEEE
Confidence 578999 99999999999998763 3555554321 10001111 2222111 123358999999999
Q ss_pred EEec--CCCCcceEEEEE
Q 012225 279 VTMD--QNASSDYYIVAS 294 (468)
Q Consensus 279 v~~~--~~~g~~y~i~~~ 294 (468)
++++ ++++ +|+....
T Consensus 97 f~~~~l~~G~-~Y~f~C~ 113 (128)
T 1nwp_A 97 FDVSKLAAGE-KYGFFCS 113 (128)
T ss_dssp EEGGGSCTTS-CEEEECC
T ss_pred EeccccCCCc-eEEEEEC
Confidence 9987 4444 7998653
No 111
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=95.49 E-value=0.062 Score=46.30 Aligned_cols=83 Identities=18% Similarity=0.163 Sum_probs=50.9
Q ss_pred eEEEcCcCCCCCCCccCCCCCcceEEEEcCCCEEEEEEEEcCCCCeeeEEEeCC--eeEEEEeeCccccceeeceEEEcC
Q 012225 194 GVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNH--NLLLVETEGHYTSQQNYTSFEIHV 271 (468)
Q Consensus 194 ~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh--~~~Via~DG~~~~p~~~d~i~l~p 271 (468)
.+.++|... +.|+|++|++++|++.|.+....|.|.+... .+.....+ ..+.........|.|
T Consensus 52 ~~~~~g~~~--------------p~i~V~~GD~V~~~~tN~~~~~~H~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~i~P 116 (154)
T 2cal_A 52 SFEVHDKKN--------------PTLEIPAGATVDVTFINTNKGFGHSFDITKKGPPYAVMPVI-DPIVAGTGFSPVPKD 116 (154)
T ss_dssp CEEETTEES--------------CEEEECTTCEEEEEEEECCTTCCCCCEEESCCSCCCSSCCC-CSEEEEBCCCCCCBT
T ss_pred cccccCCCC--------------CEEEEeCCCEEEEEEEcCCCCeeeEEEEeecCcchhccccc-cccccccccccccCC
Confidence 577777764 8899999999999999975333555555532 11000000 000000001126799
Q ss_pred Cc--eEEEEEEecCCCCcceEEEEE
Q 012225 272 GQ--SYSFLVTMDQNASSDYYIVAS 294 (468)
Q Consensus 272 Gq--R~dv~v~~~~~~g~~y~i~~~ 294 (468)
|| ..++.+++ .+| .||...+
T Consensus 117 G~sgt~t~tft~--~pG-tY~y~C~ 138 (154)
T 2cal_A 117 GKFGYTDFTWHP--TAG-TYYYVCQ 138 (154)
T ss_dssp TBEEEEEEEECC--CSE-EEEEECC
T ss_pred CCceEEEEEEEE--CCc-eEEEECC
Confidence 99 88888887 467 8999775
No 112
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=95.33 E-value=0.0045 Score=49.62 Aligned_cols=73 Identities=16% Similarity=0.155 Sum_probs=46.0
Q ss_pred ceEEEEcCCCEEEEEEEEcCCCCeeeEEEeCCeeEEEEeeCccccceeeceEEEcCCceEEEEEEecCCCCcceEEEEE
Q 012225 216 YETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYTSQQNYTSFEIHVGQSYSFLVTMDQNASSDYYIVAS 294 (468)
Q Consensus 216 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~Via~DG~~~~p~~~d~i~l~pGqR~dv~v~~~~~~g~~y~i~~~ 294 (468)
++.|++++|++++|+ |.+.. .|.|++++..+.. .+|........+.+.+.||+++++.++++..+| .||....
T Consensus 19 P~~i~v~~Gd~V~~~--n~~~~-~H~~~~~~~~~~~--~~g~~~~~~~~~~~~~~pG~~~~~~f~~~~~~G-~y~y~C~ 91 (106)
T 2gim_A 19 PAKLTIKPGDTVEFL--NNKVP-PHNVVFDAALNPA--KSADLAKSLSHKQLLMSPGQSTSTTFPADAPAG-EYTFYCE 91 (106)
T ss_dssp SSEEEECTTCEEEEE--ECSSS-CCCBEECSSSSTT--CCHHHHHHHCBCSCCCSTTCEEEEECCTTCCSE-EEEEECT
T ss_pred CCEEEECCCCEEEEE--ECCCC-CceEEEeCCCCcc--cccccchhccccceeeCCCCEEEEEEecCCCCc-eEEEEeC
Confidence 478999999998775 87643 4666666542210 112110011135677999999999776634678 8998754
No 113
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=95.10 E-value=0.04 Score=46.54 Aligned_cols=76 Identities=11% Similarity=0.134 Sum_probs=48.6
Q ss_pred ceEEEEcCCCEEEEEEEE--cCCCCeeeEEEeCC--eeEEEE-------eeCcccc-----ceeeceEEEcCCceEEEEE
Q 012225 216 YETINVDPGKTYRVRVHN--VGTSTSLNFRIQNH--NLLLVE-------TEGHYTS-----QQNYTSFEIHVGQSYSFLV 279 (468)
Q Consensus 216 ~~~~~v~~G~~~rlRliN--~~~~~~~~~~i~gh--~~~Via-------~DG~~~~-----p~~~d~i~l~pGqR~dv~v 279 (468)
+..|+|++|++++|++.| .+.. .|.|.+.+. .+.-.. .|..++. ....++..|.||++.++.+
T Consensus 32 P~~i~v~~G~tV~~~~~N~~~~~~-~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pG~~~~~~~ 110 (140)
T 1qhq_A 32 QTSLSLPANTVVRLDFVNQNNLGV-QHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPDTPNALAWTAMLNAGESGSVTF 110 (140)
T ss_dssp CSEEEEETTCEEEEEEEECCSSCC-CBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCTTCTTEEEECCCBCTTEEEEEEE
T ss_pred CCeEEECCCCEEEEEEECCCCCCC-ceeEEEeccCcchhhhhhhhhhhcccccccCccccccccccceeeCCCceeEEEE
Confidence 478999999999999999 4443 455555421 110000 0111221 1224567899999999999
Q ss_pred EecCCCCcceEEEEE
Q 012225 280 TMDQNASSDYYIVAS 294 (468)
Q Consensus 280 ~~~~~~g~~y~i~~~ 294 (468)
++++ +| .|++...
T Consensus 111 ~~~~-~G-~y~f~C~ 123 (140)
T 1qhq_A 111 RTPA-PG-TYLYICT 123 (140)
T ss_dssp ECCS-SE-EEEEECC
T ss_pred EeCC-Ce-eEEEEeC
Confidence 9874 67 8988764
No 114
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=94.86 E-value=0.028 Score=46.88 Aligned_cols=77 Identities=17% Similarity=0.238 Sum_probs=48.0
Q ss_pred ceEEEE-cCCCEEEEEEEEcCCCC----eeeEEEeCCe-eEEEEe-------eCccccce----eeceEEEcCCceEEEE
Q 012225 216 YETINV-DPGKTYRVRVHNVGTST----SLNFRIQNHN-LLLVET-------EGHYTSQQ----NYTSFEIHVGQSYSFL 278 (468)
Q Consensus 216 ~~~~~v-~~G~~~rlRliN~~~~~----~~~~~i~gh~-~~Via~-------DG~~~~p~----~~d~i~l~pGqR~dv~ 278 (468)
+..|+| ++|++++|.+.|.+... .|.|.|.... +.-++. |-.++.+. ...+-.|+|||++++.
T Consensus 16 p~~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGes~~vt 95 (128)
T 2iaa_C 16 TKSIVVDKTCKEFTINLKHTGKLPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYVKAGDERVIAHTSVIGGGETDSVT 95 (128)
T ss_dssp CSEEEECTTCSEEEEEEEECSCSCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEEEEE
T ss_pred cCEEEEecCCcEEEEEEEECCCCcccCCCceEEEccccchhhHHHhhhhccccccccccccchhhccceeeCCCCEEEEE
Confidence 478999 99999999999998763 3555554321 100011 11222211 1223458999999999
Q ss_pred EEec--CCCCcceEEEE
Q 012225 279 VTMD--QNASSDYYIVA 293 (468)
Q Consensus 279 v~~~--~~~g~~y~i~~ 293 (468)
++++ ++++ +|+...
T Consensus 96 f~~~~l~~G~-~Y~f~C 111 (128)
T 2iaa_C 96 FDVSKLKEGE-DYAFFC 111 (128)
T ss_dssp EESSCCCTTC-CEEEEC
T ss_pred EeccccCCCc-eEEEEE
Confidence 9987 5444 698865
No 115
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=94.70 E-value=0.023 Score=47.46 Aligned_cols=78 Identities=17% Similarity=0.201 Sum_probs=48.6
Q ss_pred ceEEEEcCC-CEEEEEEEEcCCCC----eeeEEEeCCe-eEEEEeeC-------ccccce----eeceEEEcCCceEEEE
Q 012225 216 YETINVDPG-KTYRVRVHNVGTST----SLNFRIQNHN-LLLVETEG-------HYTSQQ----NYTSFEIHVGQSYSFL 278 (468)
Q Consensus 216 ~~~~~v~~G-~~~rlRliN~~~~~----~~~~~i~gh~-~~Via~DG-------~~~~p~----~~d~i~l~pGqR~dv~ 278 (468)
+..|+|++| ++++|.+.|.+... .|.|.|.... +.-++.|+ .++.+. ...+-.|+|||+.++.
T Consensus 17 p~~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~pGet~svt 96 (129)
T 1cuo_A 17 TRSISVPASCAEFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGGGEKTSVK 96 (129)
T ss_dssp CSEEEEETTCSEEEEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCTTCEEEEE
T ss_pred cCeEEEcCCCeEEEEEEEECCCCcccccccceEEecCcchhhhHHHhhhccccccccccccccceeeeeEECCCCEEEEE
Confidence 578999999 99999999998753 3555544321 00000111 122110 1123458999999999
Q ss_pred EEec--CCCCcceEEEEE
Q 012225 279 VTMD--QNASSDYYIVAS 294 (468)
Q Consensus 279 v~~~--~~~g~~y~i~~~ 294 (468)
++++ ..+| .||....
T Consensus 97 f~~~~~~~~G-~Y~f~C~ 113 (129)
T 1cuo_A 97 FKVSALSKDE-AYTYFCS 113 (129)
T ss_dssp EEGGGCCTTS-CEEEECC
T ss_pred EeccccCCCc-eEEEEeC
Confidence 9987 3468 8998653
No 116
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=94.18 E-value=0.016 Score=47.96 Aligned_cols=79 Identities=18% Similarity=0.254 Sum_probs=49.3
Q ss_pred cceEEEEcC-CCEEEEEEEEcCCCC----eeeEEEeCC-eeEEEEe-------eCccccc----eeeceEEEcCCceEEE
Q 012225 215 EYETINVDP-GKTYRVRVHNVGTST----SLNFRIQNH-NLLLVET-------EGHYTSQ----QNYTSFEIHVGQSYSF 277 (468)
Q Consensus 215 ~~~~~~v~~-G~~~rlRliN~~~~~----~~~~~i~gh-~~~Via~-------DG~~~~p----~~~d~i~l~pGqR~dv 277 (468)
.+..|+|++ |+++||.|.|.|... .|.|-|... .+.-++. |-.|+++ ....+-.|+|||++++
T Consensus 16 ~p~~i~V~~~Ge~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGes~~v 95 (125)
T 3fsa_A 16 NTNAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKDSV 95 (125)
T ss_dssp SCSEEEECTTCSEEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTCEEEE
T ss_pred ecCEEEEecCCCEEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccceeCCCcEEEE
Confidence 357899976 999999999999763 344444311 0110111 2234432 1223456999999999
Q ss_pred EEEecC--CCCcceEEEEE
Q 012225 278 LVTMDQ--NASSDYYIVAS 294 (468)
Q Consensus 278 ~v~~~~--~~g~~y~i~~~ 294 (468)
.++++. .+| +|.....
T Consensus 96 tf~~~~l~~~G-~y~f~C~ 113 (125)
T 3fsa_A 96 TFDVSKLKEGE-QYMFFCA 113 (125)
T ss_dssp EEEGGGC---C-CEEEECS
T ss_pred EEeCcCcCCCc-cEEEEcC
Confidence 999873 567 8988653
No 117
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=93.73 E-value=0.081 Score=46.13 Aligned_cols=78 Identities=19% Similarity=0.260 Sum_probs=48.1
Q ss_pred ceEEEE-cCCCEEEEEEEEcCCCC----eeeEEEeCCe-eEEEEeeC------ccccc----eeeceEEEcCCceEEEEE
Q 012225 216 YETINV-DPGKTYRVRVHNVGTST----SLNFRIQNHN-LLLVETEG------HYTSQ----QNYTSFEIHVGQSYSFLV 279 (468)
Q Consensus 216 ~~~~~v-~~G~~~rlRliN~~~~~----~~~~~i~gh~-~~Via~DG------~~~~p----~~~d~i~l~pGqR~dv~v 279 (468)
+..|+| ++|++++|+|.|.+... .|.|.|.... +.-++.|+ .++.+ ....+..|.|||++++.+
T Consensus 57 P~~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l~pGet~svtf 136 (167)
T 3ay2_A 57 TKDIQVSKACKEFTITLKHTGTQPKASMGHNLVIAKAEDMDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGGEESSLTL 136 (167)
T ss_dssp CSEEEEETTCSSEEEEEEECSCSCHHHHCBCCEEEEGGGHHHHHHHHGGGGGGTTSCTTCTTEEEECCCBCTTCEEEEEE
T ss_pred cceEEEecCCCEEEEEEEECCCCccccccceEEeccCcchhhhHHHhhhccccccccccccchhccceeeCCCCEEEEEE
Confidence 478999 99999999999998753 3444443321 00000011 22221 112234689999999999
Q ss_pred EecC-CCCcceEEEEE
Q 012225 280 TMDQ-NASSDYYIVAS 294 (468)
Q Consensus 280 ~~~~-~~g~~y~i~~~ 294 (468)
+++. .+| .|+....
T Consensus 137 ~~~~lkpG-~Y~f~Ct 151 (167)
T 3ay2_A 137 DPAKLADG-DYKFACT 151 (167)
T ss_dssp CGGGGTTS-CEEEECC
T ss_pred ecCCCCCc-EEEEEcC
Confidence 8872 367 7998653
No 118
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=93.52 E-value=0.12 Score=40.46 Aligned_cols=68 Identities=16% Similarity=0.221 Sum_probs=44.1
Q ss_pred ceEEEEcCCCEEEEEEEEcCCCCeeeEEEeCCeeEEEEeeCccccceeeceEEEcCCceEEEEEEecCCCCcceEEEEE
Q 012225 216 YETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYTSQQNYTSFEIHVGQSYSFLVTMDQNASSDYYIVAS 294 (468)
Q Consensus 216 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~Via~DG~~~~p~~~d~i~l~pGqR~dv~v~~~~~~g~~y~i~~~ 294 (468)
+..+++++|++++| .|.+.. .|.|++++..+. +|........+.+.+.||+++.+.+ + .+| .|++...
T Consensus 17 P~~i~v~~G~~V~~--~n~~~~-~H~~~~~~~~~p----~~~~~~~~~~~~~~~~pG~~~~~tf--~-~~G-~y~y~C~ 84 (98)
T 2plt_A 17 PKTLTIKSGETVNF--VNNAGF-PHNIVFDEDAIP----SGVNADAISRDDYLNAPGETYSVKL--T-AAG-EYGYYCE 84 (98)
T ss_dssp SSEEEECTTCEEEE--EECSSC-CEEEEECGGGSC----TTCCHHHHCEEEEECSTTCEEEEEC--C-SCE-EEEEECG
T ss_pred CCEEEECCCCEEEE--EECCCC-ceEEEEeCCCCC----CccccccccccceecCCCCEEEEEe--C-CCe-EEEEEcC
Confidence 47899999999876 688754 577777653210 1111000123568899999998854 5 468 8988764
No 119
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=93.44 E-value=0.11 Score=40.63 Aligned_cols=67 Identities=12% Similarity=0.177 Sum_probs=43.2
Q ss_pred ceEEEEcCCCEEEEEEEEcCCCCeeeEEEeCCeeEEEEeeCccccceeeceEEEcCCceEEEEEEecCCCCcceEEEEE
Q 012225 216 YETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYTSQQNYTSFEIHVGQSYSFLVTMDQNASSDYYIVAS 294 (468)
Q Consensus 216 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~Via~DG~~~~p~~~d~i~l~pGqR~dv~v~~~~~~g~~y~i~~~ 294 (468)
+..+++++|++++|+ |.+.. .|.+++++.... |..-.....+.+.+.||+.+++.+ + .+| .|++...
T Consensus 18 P~~i~v~~G~~V~~~--n~~~~-~H~~~~~~~~~p-----g~~~~~~~~~~~~~~pG~~~~~tf--~-~~G-~y~~~C~ 84 (98)
T 1pcs_A 18 PSTVTIKAGEEVKWV--NNKLS-PHNIVFDADGVP-----ADTAAKLSHKGLLFAAGESFTSTF--T-EPG-TYTYYCE 84 (98)
T ss_dssp SSEEEECTTCEEEEE--ECSSC-CEEEEECCSSSC-----HHHHHHHCEEEEECSTTCEEEEEC--C-SCE-EEEEECG
T ss_pred CCEEEECCCCEEEEE--ECCCC-CcEEEEeCCCCC-----ccccccccccccccCCCCEEEEEc--C-CCe-EEEEEcC
Confidence 478999999998876 76643 477777653211 000001113578899999998754 5 568 8988654
No 120
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=93.20 E-value=0.29 Score=51.27 Aligned_cols=61 Identities=21% Similarity=0.280 Sum_probs=49.2
Q ss_pred ceEEEEcCCCEEEEEEEEcCC--CCeeeEEEeCCeeEEEEeeCccccceeeceEEEcCCceEEEEEEecCCCCcceEEEE
Q 012225 216 YETINVDPGKTYRVRVHNVGT--STSLNFRIQNHNLLLVETEGHYTSQQNYTSFEIHVGQSYSFLVTMDQNASSDYYIVA 293 (468)
Q Consensus 216 ~~~~~v~~G~~~rlRliN~~~--~~~~~~~i~gh~~~Via~DG~~~~p~~~d~i~l~pGqR~dv~v~~~~~~g~~y~i~~ 293 (468)
++.|++++|++++|++.|... ...|.|+++++.+. ..+.||+..++.++++ .+| .||...
T Consensus 512 pp~I~V~~Gd~V~~~ltN~d~~~Dv~Hgf~ip~~gv~----------------~~i~PG~t~t~~Fta~-~pG-tY~yhC 573 (595)
T 1fwx_A 512 IESFTVKEGDEVTVIVTNLDEIDDLTHGFTMGNYGVA----------------MEIGPQMTSSVTFVAA-NPG-VYWYYC 573 (595)
T ss_dssp CSEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTEE----------------EEECTTCEEEEEEECC-SCE-EEEEEC
T ss_pred CCEEEEECCCEEEEEEEeCCCCCCceeeEEecCCCcc----------------eeeCCCCeEEEEEECC-CCE-EEEEEC
Confidence 488999999999999999653 23578887775422 5789999999999998 578 999987
Q ss_pred E
Q 012225 294 S 294 (468)
Q Consensus 294 ~ 294 (468)
+
T Consensus 574 ~ 574 (595)
T 1fwx_A 574 Q 574 (595)
T ss_dssp C
T ss_pred C
Confidence 5
No 121
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=93.11 E-value=0.27 Score=37.62 Aligned_cols=60 Identities=13% Similarity=0.220 Sum_probs=41.6
Q ss_pred ceEEEEcCCCEEEEEEEEcCCCCeeeEEEeCCeeEEEEeeCccccceeeceEEEcCCceEEEEEEecCCCCcceEEEEE
Q 012225 216 YETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYTSQQNYTSFEIHVGQSYSFLVTMDQNASSDYYIVAS 294 (468)
Q Consensus 216 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~Via~DG~~~~p~~~d~i~l~pGqR~dv~v~~~~~~g~~y~i~~~ 294 (468)
+..+++++|++++|+ |.+.. .|.+++++.. +...+...+.||+.+.+.+ + .+| .|++...
T Consensus 18 P~~i~v~~Gd~V~~~--n~~~~-~H~v~~~~~~------------~~~~~~~~~~~g~~~~~~f--~-~~G-~y~~~C~ 77 (91)
T 1bxv_A 18 PSTIEIQAGDTVQWV--NNKLA-PHNVVVEGQP------------ELSHKDLAFSPGETFEATF--S-EPG-TYTYYCE 77 (91)
T ss_dssp SSEEEECTTCEEEEE--ECSSC-CEEEEETTCG------------GGCEEEEECSTTCEEEEEC--C-SCE-EEEEECT
T ss_pred CCEEEECCCCEEEEE--ECCCC-CcEEEEeCCC------------ccCcccceeCCCCEEEEEe--C-CCE-EEEEEeC
Confidence 478999999998775 76543 4777766521 1123567889999888754 4 568 8988754
No 122
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=91.37 E-value=0.21 Score=38.83 Aligned_cols=64 Identities=17% Similarity=0.256 Sum_probs=39.5
Q ss_pred ceEEEEcCCCEEEEEEEEcCCCCeeeEEEeCCeeEEEEeeCcccc--ceeeceEEEcCCceEEEEEEecCCCCcceEEEE
Q 012225 216 YETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYTS--QQNYTSFEIHVGQSYSFLVTMDQNASSDYYIVA 293 (468)
Q Consensus 216 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~Via~DG~~~~--p~~~d~i~l~pGqR~dv~v~~~~~~g~~y~i~~ 293 (468)
+..+++++|++++|+ |.+.. . |.+.+...+. +.. ....+...+.||+++++-+ + .+| .|+...
T Consensus 18 P~~i~v~~G~~V~~~--n~~~~-~-------H~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~tf--~-~~G-~y~y~C 82 (97)
T 1b3i_A 18 PKALSISAGDTVEFV--MNKVG-P-------HNVIFDKVPA-GESAPALSNTKLAIAPGSFYSVTL--G-TPG-TYSFYC 82 (97)
T ss_dssp SSEEEECTTCEEEEE--ECSSC-C-------CCBEEEECCT-TSCHHHHCBCCCCCSCSCCEEEEC--C-SCS-EEEEEC
T ss_pred CCEEEECCCCEEEEE--ECCCC-C-------eEEEEeCCCC-ccccccccccceecCCCCEEEEEe--C-CCe-EEEEEc
Confidence 468999999997665 76643 2 4444332211 100 1113567789999998855 4 568 898865
Q ss_pred E
Q 012225 294 S 294 (468)
Q Consensus 294 ~ 294 (468)
.
T Consensus 83 ~ 83 (97)
T 1b3i_A 83 T 83 (97)
T ss_dssp S
T ss_pred c
Confidence 4
No 123
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=89.94 E-value=0.46 Score=37.69 Aligned_cols=62 Identities=18% Similarity=0.140 Sum_probs=40.4
Q ss_pred ceEEEEcCCCEEEEEEEEcCCCCeeeEEEeCCeeEEEEeeCccccceeeceEEEcCCceEEEEEEecCCCCcceEEEEE
Q 012225 216 YETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYTSQQNYTSFEIHVGQSYSFLVTMDQNASSDYYIVAS 294 (468)
Q Consensus 216 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~Via~DG~~~~p~~~d~i~l~pGqR~dv~v~~~~~~g~~y~i~~~ 294 (468)
++.|++++|++++| .|.+.. .|.+++++-. ||.. . .+.-.|.||+++++-+ + .+| .|++...
T Consensus 32 P~~i~v~~Gd~V~~--~N~d~~-~H~v~~~~~~------~g~~--~--~~~~~~~pG~~~~~tf--~-~~G-~y~y~C~ 93 (105)
T 2ov0_A 32 TPELHVKVGDTVTW--INREAM-PHNVHFVAGV------LGEA--A--LKGPMMKKEQAYSLTF--T-EAG-TYDYHCT 93 (105)
T ss_dssp SSEEEECTTCEEEE--EECSSS-CBCCEECTTT------SSSS--C--EECCCBCTTEEEEEEE--C-SCE-EEEEECS
T ss_pred CCEEEECCCCEEEE--EECCCC-CEEEEEcCCC------CCcc--c--ccccccCCCCEEEEEe--C-CCE-EEEEEeC
Confidence 47899999999877 488753 4666665421 3321 1 1222478999988755 4 568 8998753
No 124
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=89.62 E-value=0.2 Score=39.46 Aligned_cols=66 Identities=15% Similarity=0.187 Sum_probs=40.7
Q ss_pred cceEEEEcCCCEEEEEEEEcCCCCeeeEEEeCCeeEEEEeeCcc-------ccc-eeeceEEEcCCceEEEEEEecCCCC
Q 012225 215 EYETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHY-------TSQ-QNYTSFEIHVGQSYSFLVTMDQNAS 286 (468)
Q Consensus 215 ~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~Via~DG~~-------~~p-~~~d~i~l~pGqR~dv~v~~~~~~g 286 (468)
.+..|++++|++++|+ |.+.. .|.+.++ .-++.. ..+ ...+.+.+.||+++++-+ + .+|
T Consensus 15 ~P~~i~v~~G~tV~~~--n~~~~-~H~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~tf--~-~~G 81 (102)
T 1kdj_A 15 YPDSITVSAGEAVEFT--LVGET-GHNIVFD-------IPAGAPGTVASELKAASMDENDLLSEDEPSFKAKV--S-TPG 81 (102)
T ss_dssp ESSEEEECTTCCEEEE--ECSSS-CBCCEEC-------CCTTCCHHHHHHHHHTSCCTTCCBBTTBCEEEECC--C-SCE
T ss_pred eCCEEEECCCCEEEEE--ECCCC-CeEEEEe-------CcccccccccchhhcccccccceecCCCCEEEEEe--C-CCe
Confidence 3578999999998865 87643 3444443 222211 001 112457789999988854 4 568
Q ss_pred cceEEEEE
Q 012225 287 SDYYIVAS 294 (468)
Q Consensus 287 ~~y~i~~~ 294 (468)
.|+....
T Consensus 82 -~y~y~C~ 88 (102)
T 1kdj_A 82 -TYTFYCT 88 (102)
T ss_dssp -EEEEECS
T ss_pred -EEEEEeC
Confidence 8988654
No 125
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=89.58 E-value=0.73 Score=35.89 Aligned_cols=68 Identities=13% Similarity=0.142 Sum_probs=40.8
Q ss_pred cceEEEEcCCCEEEEEEEEcCCCCeeeEEEeCCeeEEEEeeCccccceeeceEEEcCCceEEEEEEecCCCCcceEEEE
Q 012225 215 EYETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYTSQQNYTSFEIHVGQSYSFLVTMDQNASSDYYIVA 293 (468)
Q Consensus 215 ~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~Via~DG~~~~p~~~d~i~l~pGqR~dv~v~~~~~~g~~y~i~~ 293 (468)
.+..+++++|++++|+ |.+.. .|.+.+....+- +|........+...+.||+++++-+ + .+| .|+...
T Consensus 16 ~P~~i~v~~GdtV~~~--n~~~~-~H~v~~~~~~~p----~g~~~~~~~~~~~~~~~g~~~~~tf--~-~~G-~y~y~C 83 (98)
T 1iuz_A 16 VPSKISVAAGEAIEFV--NNAGF-PHNIVFDEDAVP----AGVDADAISYDDYLNSKGETVVRKL--S-TPG-VYGVYC 83 (98)
T ss_dssp ESSEEEECTTCEEEEE--ECSSC-CEEEEECTTSSC----TTCCHHHHCEEEEECSTTCEEEEEC--C-SCE-EEEEEC
T ss_pred eCCEEEECCCCEEEEE--ECCCC-CEEEEEeCCCCc----cccccccccccccccCCCCEEEEEc--C-CCE-EEEEEc
Confidence 3578999999998775 77653 455555431100 1111111112347899999988755 4 568 898865
No 126
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=86.54 E-value=0.6 Score=36.38 Aligned_cols=68 Identities=15% Similarity=0.248 Sum_probs=42.0
Q ss_pred ceEEEEcCCCEEEEEEEEcCCCCeeeEEEeCCeeEEEEeeCcccc--ceeeceEEEcCCceEEEEEEecCCCCcceEEEE
Q 012225 216 YETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYTS--QQNYTSFEIHVGQSYSFLVTMDQNASSDYYIVA 293 (468)
Q Consensus 216 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~Via~DG~~~~--p~~~d~i~l~pGqR~dv~v~~~~~~g~~y~i~~ 293 (468)
+..+++++|++++| .|.+.. .|.+.+.+..+ -||.... ....+.+.+.||+++++-+ + .+| .|++..
T Consensus 16 P~~i~v~~G~tV~~--~n~~~~-~H~v~~~~~~~----p~~~~~~~~~~~~~~~~~~~G~~~~~tf--~-~~G-~y~~~C 84 (99)
T 1plc_A 16 PSEFSISPGEKIVF--KNNAGF-PHNIVFDEDSI----PSGVDASKISMSEEDLLNAKGETFEVAL--S-NKG-EYSFYC 84 (99)
T ss_dssp SSEEEECTTCEEEE--EECSSC-CBCCEECTTSS----CTTCCHHHHCCCTTCCBCSTTCEEEEEC--C-SCE-EEEEEC
T ss_pred CCEEEECCCCEEEE--EECCCC-ceEEEEeCCCC----cccccccccccccCccccCCCCEEEEEE--C-CCc-eEEEEc
Confidence 57899999998876 687754 46666654321 0121100 0112346789999988755 4 568 898865
Q ss_pred E
Q 012225 294 S 294 (468)
Q Consensus 294 ~ 294 (468)
.
T Consensus 85 ~ 85 (99)
T 1plc_A 85 S 85 (99)
T ss_dssp G
T ss_pred C
Confidence 4
No 127
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=84.20 E-value=3.3 Score=42.99 Aligned_cols=61 Identities=23% Similarity=0.316 Sum_probs=48.6
Q ss_pred ceEEEEcCCCEEEEEEEEcCC--CCeeeEEEeCCeeEEEEeeCccccceeeceEEEcCCceEEEEEEecCCCCcceEEEE
Q 012225 216 YETINVDPGKTYRVRVHNVGT--STSLNFRIQNHNLLLVETEGHYTSQQNYTSFEIHVGQSYSFLVTMDQNASSDYYIVA 293 (468)
Q Consensus 216 ~~~~~v~~G~~~rlRliN~~~--~~~~~~~i~gh~~~Via~DG~~~~p~~~d~i~l~pGqR~dv~v~~~~~~g~~y~i~~ 293 (468)
+..|+|+.|+++||.+-|... .-.|.|.+.++... +.+.||+...+.+++++ +| .|+...
T Consensus 557 P~eI~VP~GdtVrfiLTN~D~veDViHSF~IPslGIK----------------~DaiPGrtnsvtFtadk-PG-vY~y~C 618 (638)
T 3sbq_A 557 VQEFTVKQGDEVTVTITNIDQIEDVSHGFVVVNHGVS----------------MEISPQQTSSITFVADK-PG-LHWYYC 618 (638)
T ss_dssp CCEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTEE----------------EEECTTCEEEEEEECCS-CE-EEEEEC
T ss_pred CCEEEEecCceeEEEEecCCcCCCceeeeEecCCCce----------------eeeCCCCeEEEEEEcCC-CE-EEEEEC
Confidence 568999999999999999753 34688888776533 36889999999999984 68 899876
Q ss_pred E
Q 012225 294 S 294 (468)
Q Consensus 294 ~ 294 (468)
.
T Consensus 619 S 619 (638)
T 3sbq_A 619 S 619 (638)
T ss_dssp C
T ss_pred C
Confidence 4
No 128
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=83.88 E-value=3.4 Score=39.84 Aligned_cols=67 Identities=13% Similarity=0.281 Sum_probs=37.0
Q ss_pred EEEEEcCcCCCceEEEecCCEEEEEEEeCCCCCc--------eeecCcccC--CCCCCCC------CCCC-CCCCcCCCC
Q 012225 50 QVIAINGKFPGAVLNATTNNNIVINVQNDLDESL--------LMTWPGIQM--RRNSWQD------GVQG-TNCPIPSQW 112 (468)
Q Consensus 50 ~~~~~Ng~~PgP~i~~~~Gd~v~v~v~N~l~~~~--------siH~HG~~~--~~~~~~D------Gv~~-tq~~I~PG~ 112 (468)
++...+=.+||-++++ .++|+|+.+++. +++|=.-.. ..+..-| |... ...||+|||
T Consensus 253 ~v~~A~Y~vpgR~l~~------~~~VtN~g~~pvrlgeF~tA~vrFln~~~~~~~~~~P~~lla~~gL~vsd~~pI~PGE 326 (382)
T 1yew_A 253 KVEDATYRVPGRAMRM------KLTITNHGNSPIRLGEFYTASVRFLDSDVYKDTTGYPEDLLAEDGLSVSDNSPLAPGE 326 (382)
T ss_dssp EEEEEEEESSCSEEEE------EEEEEECSSSCEEEEEEECSSCEEECTTTCCCCSCCCGGGEETTCEEESCCSCBCTTC
T ss_pred EeeccEEecCCcEEEE------EEEEEcCCCCceEeeeEEeccEEEeCCcccccCCCChHHhhccCCceeCCCCCcCCCc
Confidence 4444444567777654 467778776543 233322111 0011111 3222 357899999
Q ss_pred ceEEEEEeCC
Q 012225 113 NWTYQFQVKD 122 (468)
Q Consensus 113 ~~~y~f~~~~ 122 (468)
+.+.+.++.|
T Consensus 327 Tr~~~v~a~d 336 (382)
T 1yew_A 327 TRTVDVTASD 336 (382)
T ss_dssp EEEEEEEEEC
T ss_pred eeEEEEEeeh
Confidence 9999999854
No 129
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=83.11 E-value=3.7 Score=34.11 Aligned_cols=58 Identities=17% Similarity=0.340 Sum_probs=43.4
Q ss_pred eEEEEcCCCEEEEEEEEcCCCCeeeEEEeCCeeEEEEeeCccccceeeceEEEcCCceEEEEEEecCCCCcceEEEEE
Q 012225 217 ETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYTSQQNYTSFEIHVGQSYSFLVTMDQNASSDYYIVAS 294 (468)
Q Consensus 217 ~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~Via~DG~~~~p~~~d~i~l~pGqR~dv~v~~~~~~g~~y~i~~~ 294 (468)
..+.++.|+++||++-|.. ..|.|.+.+..+. +.+.||+.-.+.++++ .+| .|+....
T Consensus 60 ~~l~Vp~G~~V~~~vts~D--V~Hsf~ip~~~~k----------------~d~~PG~~~~~~~~~~-~~G-~y~~~C~ 117 (135)
T 2cua_A 60 NPIEVPQGAEIVFKITSPD--VIHGFHVEGTNIN----------------VEVLPGEVSTVRYTFK-RPG-EYRIICN 117 (135)
T ss_dssp SSEEEETTSEEEEEEEBSS--SCEEEEETTSSCE----------------EEECBTBCEEEEEECC-SCE-EEEEECC
T ss_pred CEEEEcCCCEEEEEEEeCC--ccceEEecCCCce----------------eEeCCCCcEEEEEEcC-CCE-EEEEECc
Confidence 4699999999999998865 3577777654432 4567888888888888 467 8888653
No 130
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=82.80 E-value=1.7 Score=36.01 Aligned_cols=61 Identities=15% Similarity=0.201 Sum_probs=38.6
Q ss_pred ceEEEEcCCCEEEEEEEEcCCCCeeeEEEeCCeeEEEEeeCccccceeeceEEEcCCceEEEEEEecCCCCcceEEEE
Q 012225 216 YETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYTSQQNYTSFEIHVGQSYSFLVTMDQNASSDYYIVA 293 (468)
Q Consensus 216 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~Via~DG~~~~p~~~d~i~l~pGqR~dv~v~~~~~~g~~y~i~~ 293 (468)
+..+++++|++++|+ |.+.. .|.+.+.... +|. ...+.-.+.||+++++-+ + .+| .|++..
T Consensus 59 P~~i~V~~GdtV~~~--N~d~~-~H~v~~~~~~------~g~----~~~~s~~l~pG~t~~~tF--~-~~G-~y~y~C 119 (132)
T 3c75_A 59 TPEVTIKAGETVYWV--NGEVM-PHNVAFKKGI------VGE----DAFRGEMMTKDQAYAITF--N-EAG-SYDYFC 119 (132)
T ss_dssp SSEEEECTTCEEEEE--ECSSS-CBCCEECTTT------SSS----SCEECCCBCTTEEEEEEE--C-SCE-EEEEEC
T ss_pred CCEEEECCCCEEEEE--ECCCC-ceEEEEeCCC------CCc----ccccccccCCCCEEEEEc--C-CCE-EEEEEe
Confidence 478999999998775 87653 3555544321 111 012233578999988765 4 567 898865
No 131
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=82.09 E-value=9.5 Score=35.47 Aligned_cols=75 Identities=16% Similarity=0.090 Sum_probs=51.5
Q ss_pred ceEEEecCCEEEEEEEeCCCCCceeecCcccCCCCCCCCCCCCCCCCcCCCCceEEEEEeCCCceeeEEeeC--cccccc
Q 012225 61 AVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQGTNCPIPSQWNWTYQFQVKDQIGSFFYFPS--LNLQRV 138 (468)
Q Consensus 61 P~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~y~f~~~~~~Gt~wyH~H--~~~q~~ 138 (468)
..|.+..|+.|++.+++. +.-|+...-.+.. +.-+-||..-...|.+ +++|+|+..|. .+.. -
T Consensus 171 n~l~lP~g~~v~~~~tS~-DViHsf~ip~l~~------------k~da~PG~~n~~~~~~-~~~G~y~g~Cse~CG~~-H 235 (262)
T 2gsm_B 171 TAMVVPVNKTVVVQVTGA-DVIHSWTVPAFGV------------KQDAVPGRLAQLWFRA-EREGIFFGQCSELCGIS-H 235 (262)
T ss_dssp SCEEEETTSEEEEEEEES-SSCEEEEEGGGTE------------EEEECBTCCEEEEEEC-CSCEEEEECCCSCCSTT-G
T ss_pred ceEEEecCCEEEEEEEEC-cccceeeecccCc------------eEEecCCceeEEEEec-CCcEEEEEEChHhcccC-c
Confidence 469999999999999987 4444433333211 2225689888999998 68999999997 2322 2
Q ss_pred CCeeecEEEecC
Q 012225 139 SGGFGPVIINNR 150 (468)
Q Consensus 139 ~Gl~G~liV~~~ 150 (468)
..|.+.++|.++
T Consensus 236 ~~M~~~v~vv~~ 247 (262)
T 2gsm_B 236 AYMPITVKVVSE 247 (262)
T ss_dssp GGCCEEEEEECH
T ss_pred ccCeEEEEEEcH
Confidence 347777777654
No 132
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=81.72 E-value=11 Score=35.62 Aligned_cols=76 Identities=16% Similarity=-0.002 Sum_probs=52.1
Q ss_pred ceEEEecCCEEEEEEEeCCCCCceeecCcccCCCCCCCCCCCCCCCCcCCCCceEEEEEeCCCceeeEEeeCc-cccccC
Q 012225 61 AVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQGTNCPIPSQWNWTYQFQVKDQIGSFFYFPSL-NLQRVS 139 (468)
Q Consensus 61 P~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~y~f~~~~~~Gt~wyH~H~-~~q~~~ 139 (468)
..|.+..|+.|++.+++. +.-|+...-.+. -+.-+-||..-...|.+ +++|+|+..|.. -+..-.
T Consensus 189 N~lvlP~g~~V~~~ltS~-DViHsf~iP~lg------------~k~daiPG~~n~~~~~~-~~~G~y~g~CsE~CG~~Hs 254 (298)
T 3hb3_B 189 NPVVVPVGKKVLVQVTAT-DVIHAWTIPAFA------------VKQDAVPGRIAQLWFSV-DQEGVYFGQCSELCGINHA 254 (298)
T ss_dssp SCEEEESSSEEEEEEEES-SSCEEEEEGGGT------------EEEEECTTCCEEEEEEC-SSSEEEEECCCSCCSTTTT
T ss_pred ceEEEEcCCEEEEEEEeC-CccceeeEcccC------------ceEEecCCceEEEEEEe-CCCEEEEEEcccccCcCcc
Confidence 579999999999999995 343333332221 12224689888999998 689999999982 222223
Q ss_pred CeeecEEEecC
Q 012225 140 GGFGPVIINNR 150 (468)
Q Consensus 140 Gl~G~liV~~~ 150 (468)
.|.+.+.|.++
T Consensus 255 ~M~~~v~vvs~ 265 (298)
T 3hb3_B 255 YMPIVVKAVSQ 265 (298)
T ss_dssp SCCEEEEEECH
T ss_pred CCeeEEEEEcH
Confidence 47777777764
No 133
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=81.10 E-value=2.3 Score=33.57 Aligned_cols=62 Identities=15% Similarity=0.226 Sum_probs=38.4
Q ss_pred ceEEEEcCCCEEEEEEEEcCCCCeeeEEEeCCeeEEEEeeCccccceeeceEEEcCCceEEEEEEecCCCCcceEEEEE
Q 012225 216 YETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYTSQQNYTSFEIHVGQSYSFLVTMDQNASSDYYIVAS 294 (468)
Q Consensus 216 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~Via~DG~~~~p~~~d~i~l~pGqR~dv~v~~~~~~g~~y~i~~~ 294 (468)
+..+++++|++++|+ |.+.. .|.+.+..... |. ...+.-.|.+|+++++-+ + .+| .|++...
T Consensus 33 P~~i~V~~G~tV~~~--N~d~~-~H~v~~~~~~~------~~----~~~~s~~l~~g~~~~~tf--~-~~G-~y~~~C~ 94 (106)
T 1id2_A 33 TPEVTIKAGETVYWV--NGEVM-PHNVAFKKGIV------GE----DAFRGEMMTKDQAYAITF--N-EAG-SYDYFCT 94 (106)
T ss_dssp SSEEEECTTCEEEEE--ECSSS-CBCCEECTTTS------SS----SCEECCCBCTTEEEEEEE--C-SCE-EEEEECS
T ss_pred CCEEEECCCCEEEEE--ECCCC-cEEEEEeCCCC------Cc----ccccccccCCCCEEEEEe--C-CCE-EEEEEeC
Confidence 478999999998776 87753 34444443210 10 011223578999988765 4 567 8888653
No 134
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=80.89 E-value=12 Score=30.30 Aligned_cols=72 Identities=13% Similarity=0.305 Sum_probs=50.8
Q ss_pred CCCEE--EEEEEEcCCCCeeeEEEe-CCeeEEEEee--Ccccc--------ceeeceEEEcCCceEEEEEEecC--CCCc
Q 012225 223 PGKTY--RVRVHNVGTSTSLNFRIQ-NHNLLLVETE--GHYTS--------QQNYTSFEIHVGQSYSFLVTMDQ--NASS 287 (468)
Q Consensus 223 ~G~~~--rlRliN~~~~~~~~~~i~-gh~~~Via~D--G~~~~--------p~~~d~i~l~pGqR~dv~v~~~~--~~g~ 287 (468)
.|+.+ .|.+.|.+.. ...+.+. |+.+.++-.| |..+- ........|.|||...+-...++ +||
T Consensus 16 ~g~~v~~~ltv~N~s~~-~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~~pG- 93 (120)
T 3isy_A 16 EPEQIKFNMSLKNQSER-AIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLESGETYDFSDVWKEVPEPG- 93 (120)
T ss_dssp CSSCEEEEEEEEECSSS-CEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEECTTCEEEEEEEESSCCCSE-
T ss_pred CCCeEEEEEEEEcCCCC-cEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEECCCCEEEEEEEeCCCCCCc-
Confidence 55555 6777898887 4777776 6766655544 65442 22356899999999999998884 367
Q ss_pred ceEEEEEec
Q 012225 288 DYYIVASAR 296 (468)
Q Consensus 288 ~y~i~~~~~ 296 (468)
.|.+.+...
T Consensus 94 ~Ytl~a~l~ 102 (120)
T 3isy_A 94 TYEVKVTFK 102 (120)
T ss_dssp EEEEEEEEC
T ss_pred cEEEEEEEE
Confidence 999988544
No 135
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=80.45 E-value=21 Score=28.82 Aligned_cols=73 Identities=10% Similarity=0.045 Sum_probs=50.8
Q ss_pred EEEEEEcCcCCCceEEEecCCEEEEEEEeCCCCCceeecCcccCCCCCCCCCCCCCC----CCcCCCCceEEEEEeCC--
Q 012225 49 QQVIAINGKFPGAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQGTN----CPIPSQWNWTYQFQVKD-- 122 (468)
Q Consensus 49 ~~~~~~Ng~~PgP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq----~~I~PG~~~~y~f~~~~-- 122 (468)
..+-..|-+--.=+|+..-|.+..+.|.+...+ ..| -|+||-..+| ..|+||++.+|++..++
T Consensus 22 ~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~---~Vw--------rwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~ 90 (120)
T 3isy_A 22 FNMSLKNQSERAIEFQFSTGQKFELVVYDSEHK---ERY--------RYSKEKMFTQAFQNLTLESGETYDFSDVWKEVP 90 (120)
T ss_dssp EEEEEEECSSSCEEEEESSSCCEEEEEECTTCC---EEE--------ETTTTCCCCCCCEEEEECTTCEEEEEEEESSCC
T ss_pred EEEEEEcCCCCcEEEEeCCCCEEEEEEECCCCC---EEE--------EccccchhhhhhceEEECCCCEEEEEEEeCCCC
Confidence 344444544434589999999999999986432 233 4567765444 44999999999999963
Q ss_pred CceeeEEeeC
Q 012225 123 QIGSFFYFPS 132 (468)
Q Consensus 123 ~~Gt~wyH~H 132 (468)
.+|+|..+.=
T Consensus 91 ~pG~Ytl~a~ 100 (120)
T 3isy_A 91 EPGTYEVKVT 100 (120)
T ss_dssp CSEEEEEEEE
T ss_pred CCccEEEEEE
Confidence 4899988753
No 136
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=78.58 E-value=5.8 Score=35.41 Aligned_cols=74 Identities=9% Similarity=-0.012 Sum_probs=51.8
Q ss_pred ceEEEecCCEEEEEEEeCCCCCceeecCcccCCCCCCCCCCCCCCCCcCCCCceEEEEEeCCCceeeEEeeCc-cccccC
Q 012225 61 AVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQGTNCPIPSQWNWTYQFQVKDQIGSFFYFPSL-NLQRVS 139 (468)
Q Consensus 61 P~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~y~f~~~~~~Gt~wyH~H~-~~q~~~ 139 (468)
..|.+..|+.|++.+++. +.-++...-.+. .+.-+-||..-...|.+ +++|+|+..|.. -...-.
T Consensus 41 n~l~lP~g~~V~~~lTS~-DViHSF~IP~lg------------vK~daiPGr~n~l~~~~-~~pG~y~g~CsE~CG~~Hs 106 (205)
T 1cyx_A 41 NEIAFPANTPVYFKVTSN-SVMHSFFIPRLG------------SQIYAMAGMQTRLHLIA-NEPGTYDGICAEICGPGHS 106 (205)
T ss_dssp SEEEEETTSCEEEEEEES-SSCEEEEEGGGT------------EEEEECTTCCEEEEECC-SSSEEEEEEECSCCSTTST
T ss_pred ceEEEeCCCEEEEEEecC-CceeeEEecccC------------cEEEecCCceEEEEEEe-CCCeEEEEEcccccccchh
Confidence 379999999999999987 433333332221 12335789999999998 689999999972 222224
Q ss_pred CeeecEEEe
Q 012225 140 GGFGPVIIN 148 (468)
Q Consensus 140 Gl~G~liV~ 148 (468)
.|.+.++|.
T Consensus 107 ~M~~~v~vv 115 (205)
T 1cyx_A 107 GMKFKAIAT 115 (205)
T ss_dssp TCCEEEEEE
T ss_pred hceEEEEEE
Confidence 577778877
No 137
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=77.65 E-value=6.6 Score=33.93 Aligned_cols=58 Identities=17% Similarity=0.350 Sum_probs=44.7
Q ss_pred eEEEEcCCCEEEEEEEEcCCCCeeeEEEeCCeeEEEEeeCccccceeeceEEEcCCceEEEEEEecCCCCcceEEEEE
Q 012225 217 ETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYTSQQNYTSFEIHVGQSYSFLVTMDQNASSDYYIVAS 294 (468)
Q Consensus 217 ~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~Via~DG~~~~p~~~d~i~l~pGqR~dv~v~~~~~~g~~y~i~~~ 294 (468)
..+.++.|+++||++-|. .-.|.|.+.+.... +.+-||+.-.+.+++++ +| .|+....
T Consensus 93 n~l~VP~G~~Vr~~vTS~--DViHsf~IP~lgik----------------~da~PG~~n~~~~~~~k-pG-~y~g~Cs 150 (168)
T 3s8f_B 93 NPIEVPQGAEIVFKITSP--DVIHGFHVEGTNIN----------------VEVLPGEVSTVRYTFKR-PG-EYRIICN 150 (168)
T ss_dssp SSEEEETTSEEEEEEECS--SSCEEEEETTSSCE----------------EEECTTBCEEEEEECCS-CE-EEEEECC
T ss_pred CEEEEeCCCeEEEEEecC--CceEEEEECCCCeE----------------EEecCCceeEEEEEeCC-CE-EEEEECC
Confidence 458999999999999986 44688888765433 35668888888888884 67 8988764
No 138
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=77.22 E-value=1.1 Score=36.69 Aligned_cols=74 Identities=15% Similarity=0.262 Sum_probs=43.9
Q ss_pred ceEEEEcCCCEEEEEEEEcCCCCeeeEEEeCCeeEEEEeeCccccceeeceEEEcCCceEEEEEEecCCCCcceEEEEEe
Q 012225 216 YETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYTSQQNYTSFEIHVGQSYSFLVTMDQNASSDYYIVASA 295 (468)
Q Consensus 216 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~Via~DG~~~~p~~~d~i~l~pGqR~dv~v~~~~~~g~~y~i~~~~ 295 (468)
+..|++++|++|+|.+-|. +|.++.. ++. .|.....+.+.||+.+++-+ + .+| .|+.....
T Consensus 20 P~~i~V~~GdtV~f~~~~~-----------~H~v~~~--~~~--~P~g~~~f~~~pg~t~s~TF--~-~pG-~y~y~C~~ 80 (123)
T 3erx_A 20 PAFVRAEPGDVINFVPTDK-----------SHNVEAI--KEI--LPEGVESFKSKINESYTLTV--T-EPG-LYGVKCTP 80 (123)
T ss_dssp SSEEEECTTEEEEEEESST-----------TCCCEEC--TTS--SCTTCCCCBCCTTCCEEEEE--C-SCE-EEEEECGG
T ss_pred CCEEEECCCCEEEEEECCC-----------CceEEEc--CCc--CCCCccceecCCCCEEEEEe--C-CCe-EEEEEeCC
Confidence 4789999999988876652 2444432 110 12112234467999887776 4 468 89986542
Q ss_pred cccccccccccceEEEEEEc
Q 012225 296 RFVNESFWQRVTGVAILHYS 315 (468)
Q Consensus 296 ~~~~~~~~~~~~~~ail~y~ 315 (468)
.. ...-.+.|...
T Consensus 81 ----H~---~~GM~G~I~V~ 93 (123)
T 3erx_A 81 ----HF---GMGMVGLVQVG 93 (123)
T ss_dssp ----GT---TTTCEEEEEES
T ss_pred ----CC---cCCcEEEEEEC
Confidence 11 12355666665
No 139
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=74.31 E-value=11 Score=36.83 Aligned_cols=138 Identities=17% Similarity=0.163 Sum_probs=0.0
Q ss_pred chhhHhHHHHHHHHHHHHhhhhccccCccEEEEEEEEE--EEEC--------CCCceEEEEEEcCcCCCceEEEecCCEE
Q 012225 2 ASLRFLSLFLVLPIHIALFSSLCFAEDDTIFYDFKVSY--ITAS--------PLGVPQQVIAINGKFPGAVLNATTNNNI 71 (468)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~l~~~~--~~~~--------~dG~~~~~~~~Ng~~PgP~i~~~~Gd~v 71 (468)
+-+...++.+++++++.+-.+.......+.-+.-...+ ..+. ..-+..++-..+=++||-+++++
T Consensus 229 rkv~~~~~~~tlv~v~~gy~~t~~~yP~tiPlQag~~~~i~Pl~~~~~~~~~~~~V~~~v~~A~Y~vpgR~l~~~----- 303 (419)
T 3rfr_A 229 RRIGAIVLALTILATIVGYAVTNSTFPRTIPLQAGLQKPLTPIETEGTVGVGKEQVTTELNGGVYKVPGRELTIN----- 303 (419)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSSCSCCCCCCSCCSCCCCCCSSCSTTCSSCCCEEEEEEEEEESSSSEEEEE-----
T ss_pred ceeehhHHHHHHHHHHHHHHhhhhcCCCccccccccccCCccCccccccCCCCCceEEEEeceEEecCCcEEEEE-----
Q ss_pred EEEEEeCCCCCce---eecCcccCCCCCC-------------CCCCCCCCCCcCCCCceEEEEEeCC-------------
Q 012225 72 VINVQNDLDESLL---MTWPGIQMRRNSW-------------QDGVQGTNCPIPSQWNWTYQFQVKD------------- 122 (468)
Q Consensus 72 ~v~v~N~l~~~~s---iH~HG~~~~~~~~-------------~DGv~~tq~~I~PG~~~~y~f~~~~------------- 122 (468)
++|+|+.+++.. .-.-|++...... .+|.. +..||+|||+.+.+.++.|
T Consensus 304 -~~VtN~g~~pvrlgeF~tA~vrFlnp~v~~~~~~~p~~l~a~~GL~-s~~pI~PGETrt~~V~a~da~WeveRL~~l~~ 381 (419)
T 3rfr_A 304 -VKVKNGTSQPVRLGEYTAAGLRFLNPTVFTQKPDFPDYLLADRGLS-NDDVIAPGESKEIVVKIQDARWDIERLSDLAY 381 (419)
T ss_dssp -EEEECCSSSCBEEEEEECSSCEEECTTTCSSCCCCCTTTEESCCCC-CCCCBCTTCEEEEEEEEECHHHHHTTGGGGGG
T ss_pred -EEEecCCCCceEEeeEEEccEEEeCcccccCCCCCchhhhhccCCC-CCCCcCCCcceEEEEEeehHHHHHHHHhhhhc
Q ss_pred -----CceeeEEeeCccccccCCeeecEE
Q 012225 123 -----QIGSFFYFPSLNLQRVSGGFGPVI 146 (468)
Q Consensus 123 -----~~Gt~wyH~H~~~q~~~Gl~G~li 146 (468)
-.|..++.+-.+..+..-+.|++|
T Consensus 382 D~dSrfgGLLfF~d~~G~r~i~~I~~pvI 410 (419)
T 3rfr_A 382 DTDSQVGGLLFFFTPDGKRFAAEIGGPVI 410 (419)
T ss_dssp SSSCEEEEEEEEECSSSCEEEEEEEEECE
T ss_pred CchhheeEEEEEEcCCCCEEEEeccCccc
No 140
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=74.18 E-value=2.1 Score=33.08 Aligned_cols=30 Identities=17% Similarity=0.009 Sum_probs=23.8
Q ss_pred EEEEecCCcEEEEEEecCCCCCCceeccCCCc
Q 012225 433 SLINATYKGFIEIILQNNDTKMQSFHMDGYSF 464 (468)
Q Consensus 433 ~~~~~~~g~~Veivi~N~~~~~HP~HLHGh~F 464 (468)
..+.++.|++|.| .|.+...|.+|+|+..|
T Consensus 17 ~~i~v~~G~tV~~--~n~~~~~H~~~~~~~~~ 46 (99)
T 1byp_A 17 SDLSIASGEKITF--KNNAGFPHNDLFDKKEV 46 (99)
T ss_dssp SEEEECTTEEEEE--EECSSCCBCCEECTTSS
T ss_pred CEEEECCCCEEEE--EECCCCcceEEEeCCCC
Confidence 3567899999877 57777899999998543
No 141
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=72.97 E-value=24 Score=31.95 Aligned_cols=74 Identities=11% Similarity=-0.070 Sum_probs=50.1
Q ss_pred ceEEEecCCEEEEEEEeCCCCCceeecCcccCCCCCCCCCCCCCCCCcCCCCceEEEEEeCCCceeeEEeeC--cccccc
Q 012225 61 AVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQGTNCPIPSQWNWTYQFQVKDQIGSFFYFPS--LNLQRV 138 (468)
Q Consensus 61 P~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~y~f~~~~~~Gt~wyH~H--~~~q~~ 138 (468)
..+.+..|..|++.++.. +.-|+...-.+.. .+| .-||..-...|++ +++|+|+..|. .+..-
T Consensus 140 n~lvlP~~~~Vr~~vtS~-DViHsf~vP~lg~----K~D--------aiPGr~n~~~~~~-~~~G~y~g~Cse~CG~~H- 204 (227)
T 1v54_B 140 NRVVLPMEMTIRMLVSSE-DVLHSWAVPSLGL----KTD--------AIPGRLNQTTLMS-SRPGLYYGQCSEICGSNH- 204 (227)
T ss_dssp SCEEEETTSCEEEEEEES-SSCEEEEEGGGTE----EEE--------ECTTCCEEEEECC-SSCEEEEECCCSCCSTTG-
T ss_pred ceEEEecCCEEEEEEEeC-cccceeeecccCc----EEE--------ecCCceEEEEEec-CCcEEEEEEehhhccccc-
Confidence 579999999999999985 4444443333321 133 4678888889998 68999999997 23222
Q ss_pred CCeeecEEEec
Q 012225 139 SGGFGPVIINN 149 (468)
Q Consensus 139 ~Gl~G~liV~~ 149 (468)
.-|.+.+.+.+
T Consensus 205 s~M~~~v~vv~ 215 (227)
T 1v54_B 205 SFMPIVLELVP 215 (227)
T ss_dssp GGCCEEEEEEC
T ss_pred ccCeEEEEEEc
Confidence 23666666654
No 142
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=66.33 E-value=1.8 Score=35.71 Aligned_cols=75 Identities=12% Similarity=0.232 Sum_probs=43.4
Q ss_pred ceEEEEcCCCEEEEEEEEcCCCCeeeEEEeCCeeEEEEeeCccccceeeceEEEcCCceEEEEEEecCCCCcceEEEEEe
Q 012225 216 YETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYTSQQNYTSFEIHVGQSYSFLVTMDQNASSDYYIVASA 295 (468)
Q Consensus 216 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~Via~DG~~~~p~~~d~i~l~pGqR~dv~v~~~~~~g~~y~i~~~~ 295 (468)
+..+++++|++|+|.+-|. +|.++.. ++. .|.....+.+.||+.+++-+ + .+| .|+.....
T Consensus 22 P~~i~V~~GDtVtf~n~~~-----------~H~v~~~--~~~--~P~g~~~f~s~pGet~s~TF--~-~pG-~y~y~C~~ 82 (127)
T 3tu6_A 22 PAVIRAQPGDTVTFVAKDK-----------GHNSALM--KGG--APEGAETWKGKINEEITVTL--S-KPG-VYMYQCAP 82 (127)
T ss_dssp SSEEEECTTCEEEEECSSS-----------SCCCEEC--TTC--SCTTCCCCBCCTTCCCEEEC--C-SCE-EEEEECTT
T ss_pred CCEEEECCCCEEEEEECCC-----------CceEEEc--cCc--CCCCccceecCCCCEEEEEe--C-CCe-EEEEEeCC
Confidence 5789999999988765542 2544432 111 12111234457999887766 4 568 89986541
Q ss_pred cccccccccccceEEEEEEcC
Q 012225 296 RFVNESFWQRVTGVAILHYSN 316 (468)
Q Consensus 296 ~~~~~~~~~~~~~~ail~y~~ 316 (468)
.. ...-.+.|....
T Consensus 83 ----H~---~~GM~G~I~V~~ 96 (127)
T 3tu6_A 83 ----HV---GMGMIGAIVVGE 96 (127)
T ss_dssp ----TG---GGTCEEEEEESS
T ss_pred ----CC---cCCcEEEEEECc
Confidence 21 133566666653
No 143
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=64.87 E-value=4.4 Score=33.06 Aligned_cols=74 Identities=16% Similarity=0.306 Sum_probs=41.1
Q ss_pred ceEEEEcCCCEEEEEEEEcCCCCeeeEEEeCCeeEEEEeeCccccceeeceEEEcCCceEEEEEEecCCCCcceEEEEEe
Q 012225 216 YETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYTSQQNYTSFEIHVGQSYSFLVTMDQNASSDYYIVASA 295 (468)
Q Consensus 216 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~Via~DG~~~~p~~~d~i~l~pGqR~dv~v~~~~~~g~~y~i~~~~ 295 (468)
+..+++++|++|+|. |.+. +|.+.+. ++. .|.....+.+.||+++.+-+ + .+| .|+.....
T Consensus 20 P~~i~V~~GdtV~f~--~~~~---------~H~v~~~--~~~--~p~~~~~~~~~pG~t~~~tF--~-~~G-~y~y~C~~ 80 (123)
T 1paz_A 20 PAYIKANPGDTVTFI--PVDK---------GHNVESI--KDM--IPEGAEKFKSKINENYVLTV--T-QPG-AYLVKCTP 80 (123)
T ss_dssp SSEEEECTTCEEEEE--ESSS---------SCCCEEC--TTC--SCTTCCCCBCCTTCCEEEEC--C-SCE-EEEEECTT
T ss_pred CCEEEECCCCEEEEE--ECCC---------CeEEEEe--ccc--CCCCccceecCCCCEEEEEe--C-CCE-EEEEEeCC
Confidence 478999999998765 4432 2554432 110 01111123457999876555 5 467 89886531
Q ss_pred cccccccccccceEEEEEEc
Q 012225 296 RFVNESFWQRVTGVAILHYS 315 (468)
Q Consensus 296 ~~~~~~~~~~~~~~ail~y~ 315 (468)
.+ .....+.|...
T Consensus 81 ----H~---~~gM~G~I~V~ 93 (123)
T 1paz_A 81 ----HY---AMGMIALIAVG 93 (123)
T ss_dssp ----TG---GGTCEEEEEES
T ss_pred ----cc---cCCCEEEEEEc
Confidence 11 12455666665
No 144
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=63.56 E-value=7.4 Score=31.57 Aligned_cols=59 Identities=17% Similarity=0.329 Sum_probs=35.4
Q ss_pred ceEEEEcCCCEEEEEEEEcCCCCeeeEEEeCCeeEEEEeeCccccceeeceEEEcCCceEEEEEEecCCCCcceEEEE
Q 012225 216 YETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYTSQQNYTSFEIHVGQSYSFLVTMDQNASSDYYIVA 293 (468)
Q Consensus 216 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~Via~DG~~~~p~~~d~i~l~pGqR~dv~v~~~~~~g~~y~i~~ 293 (468)
+..+++++|++++|+ |.+. +|.+.+.. |. + |.....+.+.+|+++.+-+ + .+| .|++..
T Consensus 20 P~~i~V~~GdtV~f~--n~d~---------~H~v~~~~--~~-~-p~~~~~~~~~~g~t~~~tF--~-~~G-~y~y~C 78 (122)
T 2ux6_A 20 PASLKVAPGDTVTFI--PTDK---------GHNVETIK--GM-I-PDGAEAFKSKINENYKVTF--T-APG-VYGVKC 78 (122)
T ss_dssp SSEEEECTTEEEEEE--ESSS---------SCCCEECT--TC-S-CTTCCCCBCCTTCCEEEEE--C-SCE-EEEEEE
T ss_pred CCEEEECCCCEEEEE--ECCC---------CcEEEEcc--cc-c-CCCcceeecCCCCEEEEEe--C-CCE-EEEEEe
Confidence 478999999998775 5443 34444321 11 1 1111234457899877665 4 467 898865
No 145
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=62.52 E-value=4.1 Score=33.21 Aligned_cols=74 Identities=16% Similarity=0.227 Sum_probs=41.9
Q ss_pred ceEEEEcCCCEEEEEEEEcCCCCeeeEEEeCCeeEEEEeeCccccceeeceEEEcCCceEEEEEEecCCCCcceEEEEEe
Q 012225 216 YETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYTSQQNYTSFEIHVGQSYSFLVTMDQNASSDYYIVASA 295 (468)
Q Consensus 216 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~Via~DG~~~~p~~~d~i~l~pGqR~dv~v~~~~~~g~~y~i~~~~ 295 (468)
+..|++++|++++|. |.+. +|.+.+. ++. .|.....+.+.||+++.+-+ + .+| .|++....
T Consensus 20 P~~i~V~~GdtV~f~--n~~~---------~H~v~~~--~~~--~p~~~~~~~~~pG~t~~~tF--~-~~G-~y~y~C~~ 80 (123)
T 1pmy_A 20 PALVRLKPGDSIKFL--PTDK---------GHNVETI--KGM--APDGADYVKTTVGQEAVVKF--D-KEG-VYGFKCAP 80 (123)
T ss_dssp SSEEEECTTCEEEEE--CSSS---------SCCCEEC--TTS--SCTTCCCCBCCTTSCEEEEC--C-SCE-EEEEECST
T ss_pred CCEEEECCCCEEEEE--ECCC---------CcEEEEe--ccc--CCCCccceecCCCCEEEEEe--C-CCe-EEEEEeCC
Confidence 478999999997764 5442 3555432 111 11111234567999877655 5 467 89886532
Q ss_pred cccccccccccceEEEEEEc
Q 012225 296 RFVNESFWQRVTGVAILHYS 315 (468)
Q Consensus 296 ~~~~~~~~~~~~~~ail~y~ 315 (468)
.+ .....+.|...
T Consensus 81 ----H~---~~gM~G~I~V~ 93 (123)
T 1pmy_A 81 ----HY---MMGMVALVVVG 93 (123)
T ss_dssp ----TT---TTTCEEEEEES
T ss_pred ----cc---ccCCEEEEEEc
Confidence 11 12455666665
No 146
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=60.40 E-value=22 Score=28.37 Aligned_cols=47 Identities=17% Similarity=0.399 Sum_probs=32.0
Q ss_pred CEEEEEEEEcCCC-CeeeEEEeCCe-eEEEEeeCccccceeeceEEEcCCceEEEEEEe
Q 012225 225 KTYRVRVHNVGTS-TSLNFRIQNHN-LLLVETEGHYTSQQNYTSFEIHVGQSYSFLVTM 281 (468)
Q Consensus 225 ~~~rlRliN~~~~-~~~~~~i~gh~-~~Via~DG~~~~p~~~d~i~l~pGqR~dv~v~~ 281 (468)
-.|+|||+|.+.. ..+.|.+.|.. ++++ | + ..+.+.|||..++-|..
T Consensus 33 N~Ytlki~Nkt~~~~~~~l~v~g~~~l~~~---g----~---~~i~v~~g~~~~~~v~v 81 (118)
T 2r39_A 33 NTYTLKVINKTQQVQEYNLDVKGLNDVSWY---G----K---QTIQVEPGEVLNLPMSL 81 (118)
T ss_dssp EEEEEEEEECSSSCEEEEEEEESCSSCEEE---S----C---CEEEECTTCEEEEEEEE
T ss_pred EEEEEEEEECCCCCEEEEEEEeCCcccEEe---C----C---CcEEECCCCEEEEEEEE
Confidence 4589999999875 46667777742 3332 2 1 14999999987776654
No 147
>2f1e_A Protein APAG; APAG protein, xanthomonas axonopodis PV.citri, structural genomics, unknown function; NMR {Xanthomonas axonopodis PV}
Probab=54.89 E-value=8.1 Score=31.68 Aligned_cols=48 Identities=17% Similarity=0.109 Sum_probs=28.6
Q ss_pred EEEEEeCCCCCc---eeecCcccCCC---CCCCCCCCCCCCCcCCCCceEEEEE
Q 012225 72 VINVQNDLDESL---LMTWPGIQMRR---NSWQDGVQGTNCPIPSQWNWTYQFQ 119 (468)
Q Consensus 72 ~v~v~N~l~~~~---siH~HG~~~~~---~~~~DGv~~tq~~I~PG~~~~y~f~ 119 (468)
.|++.|..+.+. +=||.=..-.+ .-.-+||-|.|.-|.||++|.|.=-
T Consensus 34 ~I~I~N~~~~~vQL~sRhW~Itd~~g~~~eV~G~GVVG~qP~L~PGe~f~YtSg 87 (127)
T 2f1e_A 34 SIRIQNAGAVPARLVARHWQITDGNGRTEQVDGEGVVGEQPWLRPGEAFHYTSG 87 (127)
T ss_dssp EEEEEECSSSCEEEEEEEEEEEETTSCEEEEEESSBTTBCCEECTTCEEEEEEE
T ss_pred EEEEEeCCCCCEEEEeceEEEEeCCCCEEEEECCCeecCCCcCCCCCceEEeCC
Confidence 466677766543 44775432211 1124676667777999998887543
No 148
>1jer_A Cucumber stellacyanin; electron transport, copper, glycoprotein, hydroxylation; 1.60A {Cucumis sativus} SCOP: b.6.1.1
Probab=53.94 E-value=14 Score=30.82 Aligned_cols=36 Identities=8% Similarity=0.182 Sum_probs=28.6
Q ss_pred EEEeCCCceeeEEeeCccccccCCeeecEEEecCCC
Q 012225 117 QFQVKDQIGSFFYFPSLNLQRVSGGFGPVIINNRKV 152 (468)
Q Consensus 117 ~f~~~~~~Gt~wyH~H~~~q~~~Gl~G~liV~~~~~ 152 (468)
.|++.+.+|++||-|-...|=..||...|.|.....
T Consensus 76 ~v~L~~~~G~~YFicg~~gHC~~GmKl~I~V~~~~~ 111 (138)
T 1jer_A 76 VIERLDELGMHYFVCTVGTHCSNGQKLSINVVAANA 111 (138)
T ss_dssp EEEECCSSEEEEEECCSTTTGGGTCEEEEEEECCC-
T ss_pred EEEeccCCcCEEEEcCCCCccccCCEEEEEEcCCCC
Confidence 466613699999999988888899999999987543
No 149
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=52.13 E-value=6.9 Score=31.96 Aligned_cols=74 Identities=12% Similarity=0.134 Sum_probs=42.9
Q ss_pred ceEEEEcCCCEEEEEEEEcCCCCeeeEEEeCCeeEEEEeeCccccceeeceEEEcCCceEEEEEEecCCCCcceEEEEEe
Q 012225 216 YETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYTSQQNYTSFEIHVGQSYSFLVTMDQNASSDYYIVASA 295 (468)
Q Consensus 216 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~Via~DG~~~~p~~~d~i~l~pGqR~dv~v~~~~~~g~~y~i~~~~ 295 (468)
+..|++++|++++|. |.+ . .|.++.. |+. .|...+.+.+.||+.+++-+ + .+| .|+.....
T Consensus 21 P~~i~V~~GDTV~f~--n~~--~-------~Hnv~~~--~~~--~p~g~~~~~~~pg~t~s~TF--~-~~G-~y~Y~C~~ 81 (124)
T 3ef4_A 21 PGFVKVEAGDTVKFV--PTD--K-------SHNAESV--REV--WPEGVAPVKGGFSKEVVFNA--E-KEG-LYVLKCAP 81 (124)
T ss_dssp SSEEEECTTCEEEEE--CSS--S-------SCCCEEC--TTT--SCTTSCCCBCCTTCCEEEEC--C-SSE-EEEEECTT
T ss_pred CCEEEECCCCEEEEE--ECC--C-------CccEEEe--CCc--CCCCccccccCCCCEEEEEe--C-CCe-EEEEEcCC
Confidence 578999999998655 554 2 3443332 221 12222345567999988766 4 468 89886532
Q ss_pred cccccccccccceEEEEEEc
Q 012225 296 RFVNESFWQRVTGVAILHYS 315 (468)
Q Consensus 296 ~~~~~~~~~~~~~~ail~y~ 315 (468)
.. .....+.|...
T Consensus 82 ----H~---~~GM~G~I~V~ 94 (124)
T 3ef4_A 82 ----HY---GMGMVVLVQVG 94 (124)
T ss_dssp ----TG---GGTCEEEEEES
T ss_pred ----CC---cCCCEEEEEEC
Confidence 21 13455666655
No 150
>1xwv_A DER F II; beta sheets, allergen; HET: PE3 XPE; 1.83A {Dermatophagoides farinae} SCOP: b.1.18.7 PDB: 1ahk_A 1ahm_A 1wrf_A 2f08_A* 1a9v_A 1ktj_A
Probab=51.41 E-value=18 Score=29.53 Aligned_cols=61 Identities=7% Similarity=0.168 Sum_probs=35.8
Q ss_pred ceEEEecCCEEEEEEEeCCCC---C--ceee--cCcccCCC-CCCCCCCCCCCCCcCCCCceEEEEEeC
Q 012225 61 AVLNATTNNNIVINVQNDLDE---S--LLMT--WPGIQMRR-NSWQDGVQGTNCPIPSQWNWTYQFQVK 121 (468)
Q Consensus 61 P~i~~~~Gd~v~v~v~N~l~~---~--~siH--~HG~~~~~-~~~~DGv~~tq~~I~PG~~~~y~f~~~ 121 (468)
+.=.++.|..+.+.+.=..++ . +.+| ..|+...- ....|+=.++.|||.+|+.++|.+..+
T Consensus 25 ~pC~l~rG~~~~i~~~f~~~~~~~~l~~~v~~~~~g~~ip~p~~~~daC~~~~CPl~~G~~~~y~~~~~ 93 (129)
T 1xwv_A 25 DPCIIHRGKPFTLEALFDANQNTKTAKIEIKASLDGLEIDVPGIDTNACHFMKCPLVKGQQYDAKYTWN 93 (129)
T ss_dssp SCEEEETTSEEEEEEEEECCSCBSCCEEEEEEEETTEEECCCSCCCBGGGTSCSSBCTTCEEEEEEEEE
T ss_pred CCCEEeCCCeEEEEEEEECCCccceEEEEEEEEEcCEEeecCCCCCCccCCccCcccCCEEEEEEEEeE
Confidence 444678888888887722222 1 1233 23444321 112233223789999999999998775
No 151
>1xvs_A Protein APAG; MCSG APC26324, midwest center for structural genomics, structure initiative, PSI, structural genomics, unknown FUN; 2.01A {Vibrio cholerae} SCOP: b.1.23.1
Probab=51.36 E-value=8.4 Score=31.56 Aligned_cols=49 Identities=20% Similarity=0.243 Sum_probs=28.6
Q ss_pred EEEEEeCCCCCc---eeecCcccCCC---CCCCCCCCCCCCCcCCCCceEEEEEe
Q 012225 72 VINVQNDLDESL---LMTWPGIQMRR---NSWQDGVQGTNCPIPSQWNWTYQFQV 120 (468)
Q Consensus 72 ~v~v~N~l~~~~---siH~HG~~~~~---~~~~DGv~~tq~~I~PG~~~~y~f~~ 120 (468)
.|++.|..+.+. +=||.=..-.+ .-.-+||-|.|.-|.||++|.|.=-.
T Consensus 33 ~I~I~N~~~~~vQL~sRhW~Itd~~g~~~eV~G~GVVG~qP~L~PGe~f~YtSg~ 87 (126)
T 1xvs_A 33 LITIKNLSSQTVQLMSRRWLITDADGKQTVVEGDGVVGEQPRIKANDEYTYSSGT 87 (126)
T ss_dssp EEEEEECSSSCEEEEEEEEEEEETTCCEEEEEEESBTTBCCEECTTCEEEEEEEE
T ss_pred EEEEEECCCCCEEEEecEEEEEeCCCCEEEEECCceEcCCCcCCCCCceEEeCCc
Confidence 466667666543 44775332111 01236666677779999988876443
No 152
>1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A
Probab=50.66 E-value=15 Score=29.57 Aligned_cols=35 Identities=9% Similarity=0.195 Sum_probs=28.5
Q ss_pred EEEEeCCCceeeEEeeCccccccCCeeecE-EEecCC
Q 012225 116 YQFQVKDQIGSFFYFPSLNLQRVSGGFGPV-IINNRK 151 (468)
Q Consensus 116 y~f~~~~~~Gt~wyH~H~~~q~~~Gl~G~l-iV~~~~ 151 (468)
..+++ +.+|++||-|-...|=..||..+| .|.+..
T Consensus 72 ~~v~l-~~~G~~yFic~~~~HC~~Gmkl~In~V~~~~ 107 (116)
T 1x9u_A 72 VKIML-NTTGPQYYICTVGDHCRVGQKLSINVVGAGG 107 (116)
T ss_dssp EEEEC-CSCEEEEEECCSTTTTTTTCEEEEEEECC--
T ss_pred eEEEE-CCCCCEEEECCCCCccccCCEEEEEEECCCC
Confidence 56777 579999999998888889999999 887654
No 153
>1xq4_A Protein APAG; all beta protein, structural genomics, protein structure initiative, PSI, northeast structural genomics consortium, NESG; 2.70A {Bordetella pertussis} SCOP: b.1.23.1
Probab=50.21 E-value=11 Score=31.39 Aligned_cols=49 Identities=12% Similarity=0.110 Sum_probs=28.8
Q ss_pred EEEEEeCCCCCc---eeecCcccCCCC---CCCCCCCCCCCCcCCCCceEEEEEe
Q 012225 72 VINVQNDLDESL---LMTWPGIQMRRN---SWQDGVQGTNCPIPSQWNWTYQFQV 120 (468)
Q Consensus 72 ~v~v~N~l~~~~---siH~HG~~~~~~---~~~DGv~~tq~~I~PG~~~~y~f~~ 120 (468)
.|++.|..+.+. +=||.=....+. -.-+||-|.|.-|.||++|.|.=-.
T Consensus 38 ~ItI~N~~~~~vQL~sRhW~ItD~~G~~~eV~G~GVVGeqPvL~PGe~F~YtSg~ 92 (139)
T 1xq4_A 38 TVRITNTGSHPAQVISRHWIITDGEERVQEVRGLGVVGQQPLLAPGETFEYTSGC 92 (139)
T ss_dssp EEEEEECSSSCEEEEEEEEEEECTTSCEEEEEEESSSSCCCEECTTCEEEEEEEE
T ss_pred EEEEEeCCCCCEEEEecEEEEEeCCCCEEEEECCCeecCCCcCCCCCceEEcCCc
Confidence 456667666543 447753321110 1246766677779999988886443
No 154
>1nep_A EPV20, BNPC2, epididymal secretory protein E1; niemann-PICK C2, LDL, cholesterol, lipid bindin; HET: NAG; 1.70A {Bos taurus} SCOP: b.1.18.7 PDB: 2hka_A*
Probab=49.76 E-value=17 Score=29.66 Aligned_cols=69 Identities=19% Similarity=0.280 Sum_probs=38.8
Q ss_pred EEEcCcCCCceEEEecCCEEEEEEEeCCC---CCceeec----CcccCCC-CCCCCCCC-CCCCCcCCCCceEEEEEeC
Q 012225 52 IAINGKFPGAVLNATTNNNIVINVQNDLD---ESLLMTW----PGIQMRR-NSWQDGVQ-GTNCPIPSQWNWTYQFQVK 121 (468)
Q Consensus 52 ~~~Ng~~PgP~i~~~~Gd~v~v~v~N~l~---~~~siH~----HG~~~~~-~~~~DGv~-~tq~~I~PG~~~~y~f~~~ 121 (468)
..++|= +.+.=.++.|..+.+.+.=..+ ....... .|+...- .+..|+=. ++.|||.+|+.++|.+.++
T Consensus 18 V~V~~C-~~~PC~l~rG~~~~i~i~f~~~~~~~~~~~~v~~~~~gv~vp~~~~~~daC~~g~~CPl~~G~~~~y~~~lp 95 (130)
T 1nep_A 18 VNVSPC-PTQPCKLHRGQSYSVNVTFTSNTQSQSSKAVVHGIVMGIPVPFPIPESDGCKSGIRCPIEKDKTYNYVNKLP 95 (130)
T ss_dssp EEEESC-SSSSEEEETTCEEEEEEEEEESSCBSCCEEEEEEEETTEEEECCCSCCBGGGTTCCSSBCTTCEEEEEEEEE
T ss_pred EEECCC-CCCCCEEEcCCeEEEEEEEEcccccceEEEEEEEEECCEEeeccCCCCCcccCCCcCcccCCcEEEEEEEeE
Confidence 345441 1234457888888887772222 2222222 3333211 12234433 3689999999999998886
No 155
>1tza_A APAG protein, SOR45; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG, unknown function; 2.40A {Shewanella oneidensis} SCOP: b.1.23.1
Probab=45.26 E-value=9.8 Score=31.50 Aligned_cols=49 Identities=18% Similarity=0.230 Sum_probs=28.3
Q ss_pred EEEEEeCCCCCc---eeecCcccCCC---CCCCCCCCCCCCCcCCCCceEEEEEe
Q 012225 72 VINVQNDLDESL---LMTWPGIQMRR---NSWQDGVQGTNCPIPSQWNWTYQFQV 120 (468)
Q Consensus 72 ~v~v~N~l~~~~---siH~HG~~~~~---~~~~DGv~~tq~~I~PG~~~~y~f~~ 120 (468)
.|++.|..+.+. +=||.=....+ .-.-+||-|.|.-|.||++|.|.=-.
T Consensus 33 ~ItI~N~~~~~vQL~sRhW~Itd~~g~~~eV~G~GVVGeqP~L~PGe~F~YtSg~ 87 (134)
T 1tza_A 33 TITIINLGEQAAKLETRHWIITDANGKTSEVQGAGVVGETPTIPPNTAYQYTSGT 87 (134)
T ss_dssp EEEEEECSSSCEEEEEEEEEEEETTSCEEEEEEESBTTBCCEECTTEEEEEEEEE
T ss_pred EEEEEeCCCCCEEEEecEEEEEeCCCCEEEEEcCceEcCCCcCCCCCceEEcCCc
Confidence 455567665543 34665332111 01246666677779999988886443
No 156
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=41.57 E-value=71 Score=28.30 Aligned_cols=59 Identities=10% Similarity=0.107 Sum_probs=42.7
Q ss_pred eEEEEcCCCEEEEEEEEcCCCCeeeEEEeCCeeEEEEeeCccccceeeceEEEcCCceEEEEEEecCCCCcceEEEEEe
Q 012225 217 ETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYTSQQNYTSFEIHVGQSYSFLVTMDQNASSDYYIVASA 295 (468)
Q Consensus 217 ~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~Via~DG~~~~p~~~d~i~l~pGqR~dv~v~~~~~~g~~y~i~~~~ 295 (468)
..+.++.|+.+||+|-+... .|.|.|......+ ..-||..-.+-+.++ .+| .|+.+..-
T Consensus 41 n~l~lP~g~~V~~~lTS~DV--iHSF~IP~lgvK~----------------daiPGr~n~l~~~~~-~pG-~y~g~CsE 99 (205)
T 1cyx_A 41 NEIAFPANTPVYFKVTSNSV--MHSFFIPRLGSQI----------------YAMAGMQTRLHLIAN-EPG-TYDGICAE 99 (205)
T ss_dssp SEEEEETTSCEEEEEEESSS--CEEEEEGGGTEEE----------------EECTTCCEEEEECCS-SSE-EEEEEECS
T ss_pred ceEEEeCCCEEEEEEecCCc--eeeEEecccCcEE----------------EecCCceEEEEEEeC-CCe-EEEEEccc
Confidence 56899999999999998655 5788888665443 344566666666677 467 88887653
No 157
>2xzz_A Protein-glutamine gamma-glutamyltransferase K; 2.30A {Homo sapiens}
Probab=35.62 E-value=29 Score=27.07 Aligned_cols=53 Identities=15% Similarity=0.066 Sum_probs=34.4
Q ss_pred CEEEEEEEeCCCCC---ceeecCcccCCCCCCCCCCCCCCCCcCCCCceEEEEEe-CCCcee
Q 012225 69 NNIVINVQNDLDES---LLMTWPGIQMRRNSWQDGVQGTNCPIPSQWNWTYQFQV-KDQIGS 126 (468)
Q Consensus 69 d~v~v~v~N~l~~~---~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~y~f~~-~~~~Gt 126 (468)
=.+.|+++|-|+.+ ..++..|.-. .++--.....|.||++..+++.. |..+|.
T Consensus 22 l~v~vsf~NPL~~~L~~c~~~vEG~GL-----~~~~~~~~~~v~pg~~~~~~~~~~P~~~G~ 78 (102)
T 2xzz_A 22 CEVQIVFKNPLPVTLTNVVFRLEGSGL-----QRPKILNVGDIGGNETVTLRQSFVPVRPGP 78 (102)
T ss_dssp EEEEEEEECCSSSCBCSEEEEEEETTT-----EEEEEEEECCBCTTCEEEEEEEECCCSCSS
T ss_pred EEEEEEEECCCCCcccCEEEEEECCCC-----CcceEEEcCcCCCCCEEEEEEEEecCcccc
Confidence 36788999999854 4567767422 12210122459999999999988 345664
No 158
>1ws8_A Mavicyanin; oxidized form, phytocyanin, cupredoxin, electron transport; 1.60A {Cucurbita pepo} SCOP: b.6.1.1 PDB: 1ws7_A
Probab=34.61 E-value=36 Score=26.90 Aligned_cols=34 Identities=9% Similarity=0.196 Sum_probs=28.2
Q ss_pred EEEEeCCCceeeEEeeCccccccCCeeecEEEecC
Q 012225 116 YQFQVKDQIGSFFYFPSLNLQRVSGGFGPVIINNR 150 (468)
Q Consensus 116 y~f~~~~~~Gt~wyH~H~~~q~~~Gl~G~liV~~~ 150 (468)
..|++ +.+|++||-|-...|=..||...|.|.+.
T Consensus 72 ~~v~L-~~~G~~yFic~~~gHC~~GmKl~I~V~~~ 105 (109)
T 1ws8_A 72 DSIPL-KRPGTFYFLCGIPGHCQLGQKVEIKVDPG 105 (109)
T ss_dssp EEEEC-CSSEEEEEECCSTTTTTTTCEEEEEECC-
T ss_pred EEEEE-CCCcCEEEECCCCCcccCCCEEEEEEcCC
Confidence 46777 58999999998888888999999988764
No 159
>2h7w_A Chagasin; beta-strands, immunoglobulin-fold, hydrolase inhibitor; 1.70A {Trypanosoma cruzi} SCOP: b.1.26.1 PDB: 2nnr_A 2oul_B 3cbj_B 3cbk_B 3e1z_A 2fo8_A 2nqd_A*
Probab=33.45 E-value=1.9e+02 Score=23.46 Aligned_cols=65 Identities=14% Similarity=0.194 Sum_probs=36.6
Q ss_pred CceEEEecCCEEEEEEEeCCCCCceeecCcccCCCCCCCCCC--------CCCCCCcCCCCceEEEEEeCCCceee
Q 012225 60 GAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGV--------QGTNCPIPSQWNWTYQFQVKDQIGSF 127 (468)
Q Consensus 60 gP~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv--------~~tq~~I~PG~~~~y~f~~~~~~Gt~ 127 (468)
|-+|+++.||++.|.|.-+-....+-..... .+..-.|++ |.....+..|....+.|++. ++|+.
T Consensus 32 ~~~I~v~~Ge~~~I~L~~NPTTGY~W~~~~~--~~~~L~~~~~~v~~~y~p~~~~~vGagG~~~w~f~A~-~~G~~ 104 (131)
T 2h7w_A 32 GATLTVAVGELVEIQLPSNPTTGFAWYFEGG--TKESPNESMFTVENKYFPPDSKLLGAGGTEHFHVTVK-AAGTH 104 (131)
T ss_dssp TCEEEECTTCEEEEEEEECGGGSCEEEBTTT--BSSCSCTTTEEEEEEEECCTTCCTTCCEEEEEEEEEC-SSEEE
T ss_pred CCEEEEeCCCEEEEEeCCCCCCCeEEEEecC--CCccccccceeecceeeeCCCCCcCCCcEEEEEEEEc-cCceE
Confidence 5699999999999999966433222222211 000112222 11112345667888888884 67754
No 160
>1fft_B Ubiquinol oxidase; electron transport, cytochrome oxidase, membrane protein, oxidoreductase; HET: HEM HEO; 3.50A {Escherichia coli} SCOP: b.6.1.2 f.17.2.1
Probab=31.19 E-value=21 Score=34.04 Aligned_cols=74 Identities=9% Similarity=0.023 Sum_probs=49.4
Q ss_pred ceEEEecCCEEEEEEEeCCCCCceeecCcccCCCCCCCCCCCCCCCCcCCCCceEEEEEeCCCceeeEEeeCc-cccccC
Q 012225 61 AVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQGTNCPIPSQWNWTYQFQVKDQIGSFFYFPSL-NLQRVS 139 (468)
Q Consensus 61 P~i~~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~y~f~~~~~~Gt~wyH~H~-~~q~~~ 139 (468)
..|++..|..|++.++.. +.-|+...-.+. -+.-+-||..-...|++ +++|+|+..|.. -+..-.
T Consensus 151 n~l~lP~g~~V~~~lTS~-DViHsf~IP~lg------------~k~DaiPGr~n~~~~~~-~~~G~y~g~CsE~CG~~Hs 216 (315)
T 1fft_B 151 NEIAFPANTPVYFKVTSN-SVMNSFFIPRLG------------SQIYAMAGMQTRLHLIA-NEPGTYDGISASYSGPGFS 216 (315)
T ss_dssp SBCCCCSSSEEEEEECBS-SSCEEEEEGGGT------------EEEEECBTSCEEEEEEC-CSCBCCEEBCCSCCSTTTT
T ss_pred ceEEEeCCCEEEEEEEeC-CccceeeecccC------------cEEeecCCcceeeEEec-CCCeEEEEeccccchhhHH
Confidence 468899999999999876 444333333331 12235688888899998 689999999972 122223
Q ss_pred CeeecEEEe
Q 012225 140 GGFGPVIIN 148 (468)
Q Consensus 140 Gl~G~liV~ 148 (468)
.|.+.++|.
T Consensus 217 ~M~~~v~vv 225 (315)
T 1fft_B 217 GMKFKAIAT 225 (315)
T ss_dssp TCCEECCBC
T ss_pred hccceEEEe
Confidence 466666666
No 161
>2kut_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Geobacter metallireducens}
Probab=29.40 E-value=1.3e+02 Score=24.11 Aligned_cols=54 Identities=19% Similarity=0.078 Sum_probs=31.4
Q ss_pred ecCCEE--EEEEEeCCCCCceeecCcccCC-CCCCCCCCCC-C--CCCcCCCCceE--EEEEeC
Q 012225 66 TTNNNI--VINVQNDLDESLLMTWPGIQMR-RNSWQDGVQG-T--NCPIPSQWNWT--YQFQVK 121 (468)
Q Consensus 66 ~~Gd~v--~v~v~N~l~~~~siH~HG~~~~-~~~~~DGv~~-t--q~~I~PG~~~~--y~f~~~ 121 (468)
.+||.+ .++|+|.......- +.+... ..+...|... + -.+|++|++.+ +.|.+.
T Consensus 13 ~~g~~vTvsatVkN~Gt~~s~a--~~V~~yl~~p~~gg~~vgt~tv~~LaaG~s~t~~v~~~~~ 74 (122)
T 2kut_A 13 FEGEEITVSARVTNRGAAEAHN--VPVAVYLGNPAQGGVEIGRDTISRIPVGGTGLARVQWKAT 74 (122)
T ss_dssp CTTCEEEEEEEEECCSSSCBCC--CCEEECSSCTTTCCCCCBCCCCSCBCTTCEEECCEEEECC
T ss_pred CCCCeEEEEEEEEeCCCcccCc--EEEEEEeCCCccCCeEEeeEEccccCCCCeEEEEEEEecC
Confidence 456655 67899998654432 333322 1122333543 2 35799999999 676663
No 162
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens}
Probab=26.48 E-value=33 Score=26.33 Aligned_cols=68 Identities=16% Similarity=0.216 Sum_probs=34.8
Q ss_pred EcCCCEEEEEEEEcCCCCeeeEEEeCC--eeEEEEeeCccccceeeceEEEcCCceEEEEEEecC--CCCcceEEEEEe
Q 012225 221 VDPGKTYRVRVHNVGTSTSLNFRIQNH--NLLLVETEGHYTSQQNYTSFEIHVGQSYSFLVTMDQ--NASSDYYIVASA 295 (468)
Q Consensus 221 v~~G~~~rlRliN~~~~~~~~~~i~gh--~~~Via~DG~~~~p~~~d~i~l~pGqR~dv~v~~~~--~~g~~y~i~~~~ 295 (468)
-+|||++++|++-..... ... .+- .+++..-+|+.+... .........++.-+.++. ..| .|.|++..
T Consensus 13 YrPGetV~~~~~~~~~~~-~p~--~~~~~~v~l~dp~g~~v~~~---~~~~~~~G~~~~~f~Lp~~~~~G-~y~i~~~~ 84 (102)
T 2p9r_A 13 YKPGQTVKFRVVSMDENF-HPL--NELIPLVYIQDPKGNRIAQW---QSFQLEGGLKQFSFPLSSEPFQG-SYKVVVQK 84 (102)
T ss_dssp ECTTCEEEEEEEEECGGG-CBC--CCEEEEEEEECTTSCEEEEE---EEEECBTTEEEEEEECCSSCCCE-EEEEEEEC
T ss_pred cCCCCEEEEEEEEECCCC-cCC--CCCceEEEEECCCCCEEEEE---EeecCCCCEEEEEEECCCCCCCe-eEEEEEEE
Confidence 589999999987654321 111 111 234444455443211 112223345555565543 345 88888754
No 163
>1lm8_V VHL, VON hippel-lindau disease tumor suppressor; regulation, tumor suppressor, oxygen sensing, transcription; 1.85A {Homo sapiens} SCOP: b.3.3.1 PDB: 1vcb_C 1lqb_C 3zrf_C 3zrc_C
Probab=26.05 E-value=66 Score=27.31 Aligned_cols=42 Identities=14% Similarity=0.123 Sum_probs=32.1
Q ss_pred ecCCEEEEEEEeCCCCCceeecCcccCCCCCCCCCCCCCCCCcCCCCceE
Q 012225 66 TTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQGTNCPIPSQWNWT 115 (468)
Q Consensus 66 ~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~ 115 (468)
+-+..+.|+|.|..+.+.-+-| -..+|.+.....++||+.++
T Consensus 14 ~s~~~~~V~FvN~s~~~V~v~W--------IDy~G~~v~Y~~L~PG~~~~ 55 (160)
T 1lm8_V 14 NSREPSQVIFCNRSPRVVLPVW--------LNFDGEPQPYPTLPPGTGRR 55 (160)
T ss_dssp CCCCEEEEEEEECSSSCEEEEE--------ECTTSCEEECCCBCTTEEEE
T ss_pred CCCceEEEEEEeCCCCeEEEEE--------ECCCCCEEEeeeeCCCCEEe
Confidence 4567899999999999999999 23566554334489998876
No 164
>2x3c_A Toxic extracellular endopeptidase; hydrolase; 1.99A {Aeromonas salmonicida subsp} PDB: 2x3a_A 2x3b_A
Probab=25.52 E-value=2.2e+02 Score=27.27 Aligned_cols=69 Identities=16% Similarity=0.222 Sum_probs=0.0
Q ss_pred eEEE----ecCCEEEEEEEeCCCCCce-eecCcccCC------------CCCCCCCCCC-CCCC-------cCCCCceEE
Q 012225 62 VLNA----TTNNNIVINVQNDLDESLL-MTWPGIQMR------------RNSWQDGVQG-TNCP-------IPSQWNWTY 116 (468)
Q Consensus 62 ~i~~----~~Gd~v~v~v~N~l~~~~s-iH~HG~~~~------------~~~~~DGv~~-tq~~-------I~PG~~~~y 116 (468)
.|.. ...-+|+++|+|..+++.+ ++|+ ..-. .....+|+-. -..| |+||++...
T Consensus 27 ~Ls~~~~~~~~~~vk~tvtN~g~~~~~lLk~~-~lD~~~~~~~~V~~~G~~v~f~Gi~~~~~~~~~d~f~~L~pG~Sve~ 105 (343)
T 2x3c_A 27 QLTLVDGSTDDVRVNLTLTNTGDKPIRLLKWQ-LPGSDDAPLFLVERDGQPVSYEGALIKRAAPTDKDFQLLKAGQSLTV 105 (343)
T ss_dssp EEEECCCSSSCCEEEEEEEECSSSCEEEEGGG-SCSSSCCCCEEEEETTEECCBCSCCCCCCCCCGGGEEEECTTCEEEE
T ss_pred EEEecccCCCCeEEEEEEEeCCCCceEeeccC-CCCcCccceEEEEeCCcccceeeEEEeccCCChhhcEEeCCCCeEEE
Q ss_pred EEEeC-----CCceeeEEee
Q 012225 117 QFQVK-----DQIGSFFYFP 131 (468)
Q Consensus 117 ~f~~~-----~~~Gt~wyH~ 131 (468)
+|.+. ...|+|-++.
T Consensus 106 ~~dla~~ydLs~gG~y~v~~ 125 (343)
T 2x3c_A 106 QAEVSGLYDMSAQGQYSIRY 125 (343)
T ss_dssp EEECTTTBTCCSCEEEEEEE
T ss_pred EEehhhccccCCCceEEEEE
No 165
>2wtp_A ORF131 protein, CZCE; metal binding protein, heavy metal, copper binding; HET: TRS; 1.50A {Ralstonia metallidurans CH34} PDB: 2wto_A*
Probab=24.71 E-value=26 Score=28.66 Aligned_cols=20 Identities=30% Similarity=0.346 Sum_probs=16.5
Q ss_pred eEEEEcCCCEEEEEEEEcCC
Q 012225 217 ETINVDPGKTYRVRVHNVGT 236 (468)
Q Consensus 217 ~~~~v~~G~~~rlRliN~~~ 236 (468)
-.|+|++||++||.+.|-+.
T Consensus 71 k~InV~~GETVrF~v~nkt~ 90 (131)
T 2wtp_A 71 RYVNVDSGETVAFRAGEKIV 90 (131)
T ss_dssp CEEEEETTCEEEEEETTEEE
T ss_pred eEEEecCCCEEEEEeCCcEE
Confidence 44999999999999988544
No 166
>4ajy_V VON hippel-lindau disease tumor suppressor; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 3zrc_C 3zrf_C* 3ztc_C* 3zun_C 4awj_C* 1lqb_C 3ztd_C* 4b95_C* 1lm8_V 1vcb_C 4b9k_C*
Probab=23.81 E-value=77 Score=26.94 Aligned_cols=44 Identities=14% Similarity=0.113 Sum_probs=33.5
Q ss_pred EecCCEEEEEEEeCCCCCceeecCcccCCCCCCCCCCCCCCCCcCCCCceEE
Q 012225 65 ATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQGTNCPIPSQWNWTY 116 (468)
Q Consensus 65 ~~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~y 116 (468)
.+-+..+.|+|.|..+.+.-+-| ...+|.+....-+.||+.++.
T Consensus 16 ~~S~~~~~V~FvN~s~~~V~v~W--------IDy~G~~~~Y~tL~PG~~~~~ 59 (163)
T 4ajy_V 16 VNSREPSQVIFCNRSPRVVLPVW--------LNFDGEPQPYPTLPPGTGRRI 59 (163)
T ss_dssp CCCCCEEEEEEEECSSSCEEEEE--------ECTTSCEEECCCBCTTEEEEE
T ss_pred CCCCceEEEEEEeCCCCeEEEEE--------ECCCCCEEEeeeeCCCCeEEe
Confidence 45678899999999999999999 336666543345899988663
No 167
>2wgn_B Inhibitor of cysteine peptidase compnd 3; hydrolase inhibitor, dynamics, peptidase inhibitor, cathepsi hydrolase inhibitor; NMR {Pseudomonas aeruginosa}
Probab=23.35 E-value=2.9e+02 Score=22.37 Aligned_cols=72 Identities=11% Similarity=0.161 Sum_probs=38.0
Q ss_pred EcCcCCCceEEEecCCEEEEEEEeCCCCCceeecC---c--ccCCCCC-CCCCCCCCCCCcCCCCceEEEEEeCCCceee
Q 012225 54 INGKFPGAVLNATTNNNIVINVQNDLDESLLMTWP---G--IQMRRNS-WQDGVQGTNCPIPSQWNWTYQFQVKDQIGSF 127 (468)
Q Consensus 54 ~Ng~~PgP~i~~~~Gd~v~v~v~N~l~~~~siH~H---G--~~~~~~~-~~DGv~~tq~~I~PG~~~~y~f~~~~~~Gt~ 127 (468)
+...--|-+|+++.||++.|.|.-+-....+-... | +...... ..+. +.....+..|....+.|++. ++|+.
T Consensus 28 ~~~~~~g~tI~v~~Ge~~~I~L~~NPTTGY~W~~~~~~~~vl~~l~~~~y~~~-~~~~~~vGagG~~~w~f~A~-~~G~~ 105 (132)
T 2wgn_B 28 LDDADDCSPLKLTQGQELVLTLPSNPTTGFRWELRNPAASVLKRLGPEVYSNS-EEDSGLVGSGGESTWRFRVA-ASGDD 105 (132)
T ss_dssp CCCSSCCSCEEECTTCEEEEEECCCTTTSCEEEEEECCTTTEEECCSCCSCSS-CSSCCCSSSSCCEEEEEEEC-SCEEE
T ss_pred EecccCCcEEEEcCCCEEEEEeCCCCCCCeEEEEecCCCceEEecccceecCC-CCccCCcCCCceEEEEEEEc-CCceE
Confidence 33334466899999999999998554322221111 1 1000000 0000 00112255678888999995 68854
No 168
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=23.29 E-value=1.9e+02 Score=26.49 Aligned_cols=58 Identities=12% Similarity=0.140 Sum_probs=41.1
Q ss_pred eEEEEcCCCEEEEEEEEcCCCCeeeEEEeCCeeEEEEeeCccccceeeceEEEcCCceEEEEEEecCCCCcceEEEEE
Q 012225 217 ETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYTSQQNYTSFEIHVGQSYSFLVTMDQNASSDYYIVAS 294 (468)
Q Consensus 217 ~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~Via~DG~~~~p~~~d~i~l~pGqR~dv~v~~~~~~g~~y~i~~~ 294 (468)
..+.++.|+.+|+++-+... .|.|.+.+...++ ..-||..-.+-+.++ .+| .|+...+
T Consensus 171 n~l~lP~g~~v~~~~tS~DV--iHsf~ip~l~~k~----------------da~PG~~n~~~~~~~-~~G-~y~g~Cs 228 (262)
T 2gsm_B 171 TAMVVPVNKTVVVQVTGADV--IHSWTVPAFGVKQ----------------DAVPGRLAQLWFRAE-REG-IFFGQCS 228 (262)
T ss_dssp SCEEEETTSEEEEEEEESSS--CEEEEEGGGTEEE----------------EECBTCCEEEEEECC-SCE-EEEECCC
T ss_pred ceEEEecCCEEEEEEEECcc--cceeeecccCceE----------------EecCCceeEEEEecC-CcE-EEEEECh
Confidence 56899999999999987654 5888888765544 234565556666666 467 7887654
No 169
>1xvs_A Protein APAG; MCSG APC26324, midwest center for structural genomics, structure initiative, PSI, structural genomics, unknown FUN; 2.01A {Vibrio cholerae} SCOP: b.1.23.1
Probab=23.28 E-value=85 Score=25.47 Aligned_cols=50 Identities=16% Similarity=0.360 Sum_probs=28.6
Q ss_pred EEEEEEEEcCCCCeeeEEEeCCeeEEEEeeCcccc----ceeeceEEEcCCceEEEE
Q 012225 226 TYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYTS----QQNYTSFEIHVGQSYSFL 278 (468)
Q Consensus 226 ~~rlRliN~~~~~~~~~~i~gh~~~Via~DG~~~~----p~~~d~i~l~pGqR~dv~ 278 (468)
.|++||-|.+... +.|-...+.|...||...+ ...-..=.|.|||.+.--
T Consensus 31 aY~I~I~N~~~~~---vQL~sRhW~Itd~~g~~~eV~G~GVVG~qP~L~PGe~f~Yt 84 (126)
T 1xvs_A 31 AYLITIKNLSSQT---VQLMSRRWLITDADGKQTVVEGDGVVGEQPRIKANDEYTYS 84 (126)
T ss_dssp EEEEEEEECSSSC---EEEEEEEEEEEETTCCEEEEEEESBTTBCCEECTTCEEEEE
T ss_pred EEEEEEEECCCCC---EEEEecEEEEEeCCCCEEEEECCceEcCCCcCCCCCceEEe
Confidence 3799999988753 3444445555555554321 111234568888866543
No 170
>3rpf_C Molybdopterin converting factor, subunit 1 (MOAD); MCSG, PSI-biology, structural genomics, midwest center for S genomics, transferase; 1.90A {Helicobacter pylori}
Probab=23.22 E-value=31 Score=24.87 Aligned_cols=26 Identities=15% Similarity=0.106 Sum_probs=21.3
Q ss_pred EEEEEEcCcC-CCceEEEecCCEEEEE
Q 012225 49 QQVIAINGKF-PGAVLNATTNNNIVIN 74 (468)
Q Consensus 49 ~~~~~~Ng~~-PgP~i~~~~Gd~v~v~ 74 (468)
.-.+.+||.+ ++..-.+++||+|.|-
T Consensus 42 ~~~vavN~~~v~~~~~~l~~gDeV~i~ 68 (74)
T 3rpf_C 42 VCAIALNDHLIDNLNTPLKDGDVISLL 68 (74)
T ss_dssp TCEEEESSSEECCTTCCCCTTCEEEEE
T ss_pred ccEEEECCEEcCCCCcCCCCCCEEEEE
Confidence 3568899998 8888889999998763
No 171
>2hj1_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; 2.10A {Haemophilus influenzae} SCOP: d.15.3.4
Probab=22.74 E-value=28 Score=26.97 Aligned_cols=24 Identities=17% Similarity=0.008 Sum_probs=20.8
Q ss_pred EEEEEcCcCCCceEEEecCCEEEE
Q 012225 50 QVIAINGKFPGAVLNATTNNNIVI 73 (468)
Q Consensus 50 ~~~~~Ng~~PgP~i~~~~Gd~v~v 73 (468)
....+||+.-.+.-.+++||+|+|
T Consensus 59 ~~V~Vng~~v~~d~~L~dGDRVEI 82 (97)
T 2hj1_A 59 NKIGIFSRPIKLTDVLKEGDRIEI 82 (97)
T ss_dssp SEEEEEECSCCTTCBCCTTCEEEE
T ss_pred cEEEEcCEECCCCccCCCCCEEEE
Confidence 468999997778888999999987
No 172
>1tza_A APAG protein, SOR45; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG, unknown function; 2.40A {Shewanella oneidensis} SCOP: b.1.23.1
Probab=21.22 E-value=95 Score=25.47 Aligned_cols=50 Identities=12% Similarity=0.350 Sum_probs=28.7
Q ss_pred EEEEEEEEcCCCCeeeEEEeCCeeEEEEeeCcccc----ceeeceEEEcCCceEEEE
Q 012225 226 TYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYTS----QQNYTSFEIHVGQSYSFL 278 (468)
Q Consensus 226 ~~rlRliN~~~~~~~~~~i~gh~~~Via~DG~~~~----p~~~d~i~l~pGqR~dv~ 278 (468)
.|++||-|.+... +.|-...+.|...||...+ .+....=.|.|||.+.--
T Consensus 31 aY~ItI~N~~~~~---vQL~sRhW~Itd~~g~~~eV~G~GVVGeqP~L~PGe~F~Yt 84 (134)
T 1tza_A 31 SYTITIINLGEQA---AKLETRHWIITDANGKTSEVQGAGVVGETPTIPPNTAYQYT 84 (134)
T ss_dssp EEEEEEEECSSSC---EEEEEEEEEEEETTSCEEEEEEESBTTBCCEECTTEEEEEE
T ss_pred EEEEEEEeCCCCC---EEEEecEEEEEeCCCCEEEEEcCceEcCCCcCCCCCceEEc
Confidence 3799999988753 3444444555555554321 111234568888876544
No 173
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=21.06 E-value=3.2e+02 Score=21.87 Aligned_cols=68 Identities=15% Similarity=0.104 Sum_probs=44.4
Q ss_pred EEcCCCEE--EEEEEEcCCCCeeeEEEeCCeeEEEEeeCccccceeeceEEEcCCceEEEEEEecC-CCCcceEEEEEec
Q 012225 220 NVDPGKTY--RVRVHNVGTSTSLNFRIQNHNLLLVETEGHYTSQQNYTSFEIHVGQSYSFLVTMDQ-NASSDYYIVASAR 296 (468)
Q Consensus 220 ~v~~G~~~--rlRliN~~~~~~~~~~i~gh~~~Via~DG~~~~p~~~d~i~l~pGqR~dv~v~~~~-~~g~~y~i~~~~~ 296 (468)
.+++|+.+ +..+-|.|....-.+.+ .++ .||..+. ...+.|++|+...+.+.... ..| +|.+.+..+
T Consensus 28 ~v~~G~~~ti~vtV~N~G~~~a~~~~V-----~ly-vng~~v~---t~~v~La~G~s~tv~f~~~~~~~G-~~~v~AvVD 97 (127)
T 3idu_A 28 VVGVNKLAEYEVHVKNLGGIGVPSTKV-----RVY-INGTLYK---NWTVSLGPKEEKVLTFNWTPTQEG-MYRINATVD 97 (127)
T ss_dssp EECTTCCEEEEEEEEECSSSCEEEEEE-----EEE-ETTEEEE---EEEEEECTTCEEEEEEEECCSSCE-EEEEEEEES
T ss_pred cccCCCEEEEEEEEEECCCCccCCcEE-----EEE-ECCEEEe---eEEeccCCCCeEEEEEEEEcCCCc-EEEEEEEEc
Confidence 67788877 56678999875433332 222 3666543 22457999999888887653 355 898888655
Q ss_pred c
Q 012225 297 F 297 (468)
Q Consensus 297 ~ 297 (468)
.
T Consensus 98 ~ 98 (127)
T 3idu_A 98 E 98 (127)
T ss_dssp T
T ss_pred C
Confidence 3
No 174
>2f1e_A Protein APAG; APAG protein, xanthomonas axonopodis PV.citri, structural genomics, unknown function; NMR {Xanthomonas axonopodis PV}
Probab=20.57 E-value=1e+02 Score=24.95 Aligned_cols=50 Identities=14% Similarity=0.316 Sum_probs=28.4
Q ss_pred EEEEEEEEcCCCCeeeEEEeCCeeEEEEeeCcccc----ceeeceEEEcCCceEEEE
Q 012225 226 TYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYTS----QQNYTSFEIHVGQSYSFL 278 (468)
Q Consensus 226 ~~rlRliN~~~~~~~~~~i~gh~~~Via~DG~~~~----p~~~d~i~l~pGqR~dv~ 278 (468)
.|++||-|.+... +.|-...+.|.+.||...+ .+.-..=.|.|||.+.--
T Consensus 32 aY~I~I~N~~~~~---vQL~sRhW~Itd~~g~~~eV~G~GVVG~qP~L~PGe~f~Yt 85 (127)
T 2f1e_A 32 AYSIRIQNAGAVP---ARLVARHWQITDGNGRTEQVDGEGVVGEQPWLRPGEAFHYT 85 (127)
T ss_dssp EEEEEEEECSSSC---EEEEEEEEEEEETTSCEEEEEESSBTTBCCEECTTCEEEEE
T ss_pred EEEEEEEeCCCCC---EEEEeceEEEEeCCCCEEEEECCCeecCCCcCCCCCceEEe
Confidence 3799999988753 3444444555555554321 111234558888876543
No 175
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=20.27 E-value=1.6e+02 Score=26.70 Aligned_cols=57 Identities=16% Similarity=0.199 Sum_probs=32.2
Q ss_pred ceEEEEcCCCEEEEEEEEcCCCCeeeEEEeCCeeEEEEeeCccccceeeceEEEcCCceEEE
Q 012225 216 YETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYTSQQNYTSFEIHVGQSYSF 277 (468)
Q Consensus 216 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~Via~DG~~~~p~~~d~i~l~pGqR~dv 277 (468)
...|..+-|.++.++|-|.+....+. . .--.|..||....=..-..|.|.|||++.+
T Consensus 128 ~EdiinRgGG~L~v~Ly~~~~~~~~~----~-~~v~V~~DG~~~~~~aG~~i~L~PGESiTl 184 (246)
T 3kmh_A 128 REDIINRGGGNLIVELWNADSNEQTA----D-SDITVVIDGCRQKHTAGSQLRLSPGESICL 184 (246)
T ss_dssp CEEEEEEEESCEEEEEEEBCTTSSBC----C-SCEEEEETTEEEEECTTCEEEECTTCEEEE
T ss_pred cccEEecCCCeEEEEEEecCCCcccc----C-CCeEEecCCeEEEeCCCCEEEECCCCeEec
Confidence 35566666666777777776542211 1 222334566442212246799999999844
Done!