Your job contains 1 sequence.
>012227
MGELAMLRQLIGQLQQFLQLYGSFPPHNTDSCFLYFHSHQHQQLPEEQTHQLHRWCLPEV
DDGAADDYYGFVMAAGKSGSCKMLEPVKPPPSKRSRKERNRGKLAGSTSTAEAMEQEIWK
EFPEDLYEAVIARLPIATFFRFRSVCQKWNSLLKSHSFSQHCAQVPQGIPWFYTITHENV
NSGAMYDPSLKKWHHPTISSLPTKMIILPVASAGGLVCFLDIGHRNFYVCNPLTQSFKEL
PARSVKVWSRVAVGMTLNGNSTSSGYKILWVGCDGEYEIYDSLRNSWTRPGSMPSNIKLP
VSLNFRSQAVSVDGILYFMRSDPEGIVSYNMVTGVWKQFIIPTPLHLNDHTLAECGGRIM
LVGLLTKNAATCVCIWELQKMTLLWKEVDRMPNIWCLDFYGKHVRMTCLGNKGLLMLSLR
SRQMNRLVTYNVMSREWLKVPGCVVPRGRKRQWIACGTAFHPCLMATA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 012227
(468 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2015974 - symbol:LCR "AT1G27340" species:3702 ... 1618 2.6e-166 1
TAIR|locus:2143256 - symbol:AT5G15710 "AT5G15710" species... 324 3.4e-29 1
TAIR|locus:2015766 - symbol:UFO "AT1G30950" species:3702 ... 237 8.8e-25 2
TAIR|locus:2169253 - symbol:AT5G43190 "AT5G43190" species... 260 2.8e-20 1
TAIR|locus:2125889 - symbol:AT4G33160 "AT4G33160" species... 243 5.7e-18 1
TAIR|locus:2082797 - symbol:HWS "HAWAIIAN SKIRT" species:... 210 6.7e-17 2
TAIR|locus:2157834 - symbol:AT5G49610 "AT5G49610" species... 172 3.4e-10 1
TAIR|locus:2094453 - symbol:AT3G25460 "AT3G25460" species... 151 8.2e-08 1
TAIR|locus:2162286 - symbol:AT5G42350 "AT5G42350" species... 109 1.3e-07 2
TAIR|locus:2162301 - symbol:AT5G42360 "AT5G42360" species... 109 1.3e-07 2
TAIR|locus:2092160 - symbol:AT3G26010 "AT3G26010" species... 144 6.6e-07 1
TAIR|locus:2083118 - symbol:AT3G49980 "AT3G49980" species... 142 9.4e-07 1
TAIR|locus:2045039 - symbol:AT2G04920 "AT2G04920" species... 140 1.5e-06 1
TAIR|locus:2025247 - symbol:AT1G76920 "AT1G76920" species... 101 1.7e-06 2
TAIR|locus:2090644 - symbol:AT3G19410 "AT3G19410" species... 137 3.2e-06 1
TAIR|locus:2093683 - symbol:AT3G16880 "AT3G16880" species... 136 4.0e-06 1
TAIR|locus:2038618 - symbol:AT2G27520 "AT2G27520" species... 134 6.0e-06 1
TAIR|locus:2097483 - symbol:AT3G59610 "AT3G59610" species... 133 1.6e-05 1
TAIR|locus:2077452 - symbol:AT3G07870 "AT3G07870" species... 117 2.3e-05 2
TAIR|locus:2083455 - symbol:AT3G20710 "AT3G20710" species... 127 3.9e-05 1
TAIR|locus:4515102531 - symbol:AT1G14315 "AT1G14315" spec... 125 4.6e-05 1
TAIR|locus:2006902 - symbol:AT1G33530 "AT1G33530" species... 127 5.6e-05 1
TAIR|locus:2090482 - symbol:AT3G17570 "AT3G17570" species... 126 5.6e-05 1
TAIR|locus:2091491 - symbol:AT3G13680 "AT3G13680" species... 126 6.0e-05 1
TAIR|locus:2090507 - symbol:AT3G17490 "AT3G17490" species... 124 9.7e-05 1
TAIR|locus:2086243 - symbol:AT3G23260 "AT3G23260" species... 123 0.00011 1
TAIR|locus:2092985 - symbol:AT3G21120 "AT3G21120" species... 123 0.00011 1
TAIR|locus:2124665 - symbol:AT4G10190 species:3702 "Arabi... 123 0.00011 1
TAIR|locus:2157378 - symbol:AT5G51000 "AT5G51000" species... 122 0.00015 1
TAIR|locus:2100524 - symbol:AT3G52320 "AT3G52320" species... 120 0.00027 1
TAIR|locus:2075790 - symbol:AT3G10430 "AT3G10430" species... 119 0.00032 1
TAIR|locus:2018017 - symbol:AT1G62270 "AT1G62270" species... 118 0.00044 1
>TAIR|locus:2015974 [details] [associations]
symbol:LCR "AT1G27340" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0010305 "leaf vascular tissue pattern
formation" evidence=IMP] [GO:0010928 "regulation of auxin mediated
signaling pathway" evidence=IMP] [GO:0060776 "simple leaf
morphogenesis" evidence=IMP] InterPro:IPR001810 InterPro:IPR015915
Pfam:PF00646 PROSITE:PS50181 SMART:SM00256 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF81383 Gene3D:2.120.10.80
EMBL:AC004557 GO:GO:0010305 GO:GO:0010928 InterPro:IPR011043
SUPFAM:SSF50965 EMBL:AY085471 EMBL:BT025325 IPI:IPI00546257
RefSeq:NP_564278.1 UniGene:At.20471 UniGene:At.22230
ProteinModelPortal:Q9FZK1 SMR:Q9FZK1 IntAct:Q9FZK1 STRING:Q9FZK1
PRIDE:Q9FZK1 EnsemblPlants:AT1G27340.1 GeneID:839623
KEGG:ath:AT1G27340 TAIR:At1g27340 eggNOG:NOG325143
HOGENOM:HOG000238626 InParanoid:Q9FZK1 OMA:ATFFRFR PhylomeDB:Q9FZK1
ProtClustDB:CLSN2688013 Genevestigator:Q9FZK1 GO:GO:0060776
Uniprot:Q9FZK1
Length = 467
Score = 1618 (574.6 bits), Expect = 2.6e-166, P = 2.6e-166
Identities = 306/450 (68%), Positives = 357/450 (79%)
Query: 22 GSFPPHNTDSCFLYFHSHQHQQLPEEQTHQLHRWCLPEVDDGAADDYYGFVMAAGKS-GS 80
GS PP ++ S L S L Q +Q + WCLP ++D +ADD VMA GK G
Sbjct: 22 GSPPPPSSSSS-LSSSSPSFLVLHHPQ-YQ-NGWCLPCIEDTSADDCCDIVMAGGKRPGI 78
Query: 81 CKMLEPVXXXXXXXXXXERNRGKLAGSTSTAEA-MEQEIWKEFPEDLYEAVIARLPIATF 139
KMLE V ER +GK M+QEIW+EFP+DL+E V++RLP+ATF
Sbjct: 79 FKMLETVKPPVKRTRK-ERTQGKSCTEVDEISGNMDQEIWQEFPQDLFEDVVSRLPMATF 137
Query: 140 FRFRSVCQKWNSLLKSHSFSQHCAQVPQGIPWFYTITHENVNSGAMYDPSLKKWHHPTIS 199
F+FR+VC+KWN+L+ S SFS+ ++PQ IPWFYTITHENVNSG +YDPSLKKWHHP I
Sbjct: 138 FQFRAVCRKWNALIDSDSFSRCFTELPQTIPWFYTITHENVNSGQVYDPSLKKWHHPIIP 197
Query: 200 SLPTKMIILPVASAGGLVCFLDIGHRNFYVCNPLTQSFKELPARSVKVWSRVAVGMTLNG 259
+LP K I+LP+ASAGGLVCFLDIGHRNFYV NPLT+SF+ELPARS KVWSRVAVGMTLNG
Sbjct: 198 ALPKKSIVLPMASAGGLVCFLDIGHRNFYVSNPLTKSFRELPARSFKVWSRVAVGMTLNG 257
Query: 260 NSTSSGYKILWVGCDGEYEIYDSLRNSWTRPGSMPSNIKLPVSLNFRSQAVSVDGILYFM 319
NSTS GYK+LWVGC+GEYE+YDSL N WT+ G++PSNIKLPV LNF+SQ V++ LYFM
Sbjct: 258 NSTSHGYKVLWVGCEGEYEVYDSLSNVWTKRGTIPSNIKLPVLLNFKSQPVAIHSTLYFM 317
Query: 320 RSDPEGIVSYNMVTGVWKQFIIPTPLHLNDHTLAECGGRIMLVGLLTKNAATCVCIWELQ 379
+DPEGI+SY+MV+G WKQFIIP P L+DHTLA CG R+MLVGLLTKNAATCVCIWELQ
Sbjct: 318 LTDPEGILSYDMVSGKWKQFIIPGPPDLSDHTLAACGERLMLVGLLTKNAATCVCIWELQ 377
Query: 380 KMTLLWKEVDRMPNIWCLDFYGKHVRMTCLGNKG-LLMLSLRSRQMNRLVTYNVMSREWL 438
KMTLLWKEVDRMPNIWCL+FYGKH+RM CLGNKG L++LSLRSRQMNRL+TYN ++REW
Sbjct: 378 KMTLLWKEVDRMPNIWCLEFYGKHIRMNCLGNKGCLILLSLRSRQMNRLITYNAVTREWT 437
Query: 439 KVPGCVVPRGRKRQWIACGTAFHPCLMATA 468
KVPGC VPRGRKR WIACGTAFHP A A
Sbjct: 438 KVPGCTVPRGRKRLWIACGTAFHPSPTARA 467
>TAIR|locus:2143256 [details] [associations]
symbol:AT5G15710 "AT5G15710" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181
SMART:SM00256 EMBL:CP002688 GenomeReviews:BA000015_GR
SUPFAM:SSF81383 Gene3D:2.130.10.80 InterPro:IPR015916 EMBL:AL391144
EMBL:AK229249 EMBL:BT011243 EMBL:BT012539 IPI:IPI00543903
PIR:T51400 RefSeq:NP_197075.1 UniGene:At.31763
ProteinModelPortal:Q9LFV5 SMR:Q9LFV5 STRING:Q9LFV5
EnsemblPlants:AT5G15710.1 GeneID:831425 KEGG:ath:AT5G15710
TAIR:At5g15710 eggNOG:NOG262508 HOGENOM:HOG000005882
InParanoid:Q9LFV5 OMA:SKMAFCD PhylomeDB:Q9LFV5
ProtClustDB:CLSN2687485 Genevestigator:Q9LFV5 Uniprot:Q9LFV5
Length = 448
Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
Identities = 100/344 (29%), Positives = 157/344 (45%)
Query: 114 MEQEIWKEFPEDLYEAVIARLPIATFFRFRSVCQKWNSLLKSHSFSQHCAQVPQGIPWFY 173
ME IW PEDL ++AR+P FR RSVC+KWN +L+ +SF + + V P
Sbjct: 99 MEDGIWAMLPEDLLNEILARVPPFMIFRIRSVCKKWNLILQDNSFLKFHSNVSSHGPCLL 158
Query: 174 TITHEN--VNSGAMYDPSLKKWHHPTISSLPTKMIILPVASAGGLVCFLDIGHRNF--YV 229
T + + +++ LK W+ + LP L V S+GGLVCF + F V
Sbjct: 159 TFWKNSPQIPQCSVFSLPLKTWYKIPFTFLPPWAFWL-VGSSGGLVCFSGLDGLTFRTLV 217
Query: 230 CNPLTQSFKELPARSVKVWSRVAVGMTLNGNSTSSGYKILWVG-CDGEY----EIYDSLR 284
CNPL QS++ LP+ ++ M ++ + S +K++ G+ E+YDS
Sbjct: 218 CNPLMQSWRTLPSMHYNQQRQLI--MVVDRSDKS--FKVIATSDIYGDKSLPTEVYDSKT 273
Query: 285 NSWTRPGSMPSNIKLPVSLNFRSQAVSVDGILYFMRSDPEGIVSYNMVTGVWKQFIIPTP 344
+ W+ MP+ V+L S+ D LY P G++ Y + +G W+ P
Sbjct: 274 DKWSLHQIMPA-----VNL-CSSKMAYCDSRLYLETLSPLGLMMYRLDSGQWEHIPAKFP 327
Query: 345 LHLND-HTLAECGGRIMLVGLL-TKNAATCVCIWELQKMTLLWKEVDRMPNIWCLDFYGK 402
L D + +A R+ LVG + + + IWEL + W E+ RMP +
Sbjct: 328 RSLLDGYLVAGTQKRLFLVGRIGLYSTLQSMRIWELDHTKVSWVEISRMPPKYFRALLRL 387
Query: 403 HV-RMTCLGNKGLLMLSLRSRQMNRLVTYNVMSREWLKVPGCVV 445
R C G L+ + S + + YNV + W + GC +
Sbjct: 388 SAERFECFGQDNLICFT--SWNQGKGLLYNVDKKIWSWISGCAL 429
>TAIR|locus:2015766 [details] [associations]
symbol:UFO "AT1G30950" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS;IMP] [GO:0005634 "nucleus" evidence=ISM] [GO:0000151
"ubiquitin ligase complex" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=RCA;TAS] [GO:0031146 "SCF-dependent
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IGI] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0042752 "regulation of circadian rhythm"
evidence=RCA] InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181
SMART:SM00256 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0030154 GO:GO:0006355
GO:GO:0006351 SUPFAM:SSF81383 GO:GO:0009908 GO:GO:0004842
GO:GO:0031146 EMBL:AC000107 EMBL:X89224 EMBL:DQ056469
IPI:IPI00521563 PIR:S57710 RefSeq:NP_564368.1 UniGene:At.51845
ProteinModelPortal:Q39090 SMR:Q39090 IntAct:Q39090 STRING:Q39090
EnsemblPlants:AT1G30950.1 GeneID:839982 KEGG:ath:AT1G30950
TAIR:At1g30950 eggNOG:NOG303383 HOGENOM:HOG000084155
InParanoid:Q39090 OMA:VEIERMP PhylomeDB:Q39090
ProtClustDB:CLSN2688127 ArrayExpress:Q39090 Genevestigator:Q39090
GermOnline:AT1G30950 Uniprot:Q39090
Length = 442
Score = 237 (88.5 bits), Expect = 8.8e-25, Sum P(2) = 8.8e-25
Identities = 71/280 (25%), Positives = 128/280 (45%)
Query: 179 NVNSGAMYDPSLKKWHHPTISSLPTKMIILPVASAGGLVCFL--DIGHRNFYVCNPLTQS 236
N G ++DP+ +W+ + + +P+ P S+GGLV ++ + G + +CNPL S
Sbjct: 125 NKAEGFLFDPNEIRWYRLSFAYIPSGFY--PSGSSGGLVSWVSEEAGLKTILLCNPLVGS 182
Query: 237 FKELPARS-VKVWSRV-------AVGMTLNGNSTSSGYKILWVGCDGEYEIYDSLRNSWT 288
+LP S +++ + ++ +T+ G+ S Y + + + + + W
Sbjct: 183 VSQLPPISRPRLFPSIGLSVTPTSIDVTVAGDDLISPYAVKNLSSESFHVDAGGFFSLWA 242
Query: 289 RPGSMPSNIKLPVSLNFRSQAVSVDGILYFMRSDPEGIVSYNMVTGVWKQFIIPTPLHLN 348
S+P +L SL + V V G Y M P ++SY + W + P L
Sbjct: 243 MTSSLP---RL-CSLE-SGKMVYVQGKFYCMNYSPFSVLSYEVTGNRWIKIQAPMRRFLR 297
Query: 349 DHTLAECGGRIMLVGLLTK---NAATCVCIWELQKMTLLWKEVDRMPNIWCLDFYGKH-- 403
+L E GR++LV + K N + +W LQ+ W E++RMP F +
Sbjct: 298 SPSLLESKGRLILVAAVEKSKLNVPKSLRLWSLQQDNATWVEIERMPQPLYTQFAAEEGG 357
Query: 404 VRMTCLGNKGLLMLSLRSRQMNRLVTYNVMSREWLKVPGC 443
C+GN+ +M+ LR + L ++++ + WL VP C
Sbjct: 358 KGFECVGNQEFVMIVLRGTSLQLL--FDIVRKSWLWVPPC 395
Score = 110 (43.8 bits), Expect = 8.8e-25, Sum P(2) = 8.8e-25
Identities = 27/76 (35%), Positives = 42/76 (55%)
Query: 108 TSTAEAMEQEIWKEFPEDLYEAVIARLPIATFFRFRSVCQKWNSLLKSHSFSQHCAQV-P 166
+S+ + M+ IW + P L + VIA LP FFR R VC+++ SLL S++F + Q+ P
Sbjct: 36 SSSGQWMDGRIWSKLPPPLLDRVIAFLPPPAFFRTRCVCKRFYSLLFSNTFLETYLQLLP 95
Query: 167 QGIPWFYTITHENVNS 182
F H+ + S
Sbjct: 96 LRHNCFLFFKHKTLKS 111
>TAIR|locus:2169253 [details] [associations]
symbol:AT5G43190 "AT5G43190" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0006865 "amino acid transport" evidence=RCA] [GO:0006869 "lipid
transport" evidence=RCA] [GO:0015824 "proline transport"
evidence=RCA] InterPro:IPR001810 InterPro:IPR011498
InterPro:IPR015915 Pfam:PF00646 Pfam:PF07646 PROSITE:PS50181
SMART:SM00256 EMBL:CP002688 GenomeReviews:BA000015_GR
SUPFAM:SSF81383 Gene3D:2.120.10.80 InterPro:IPR017451
TIGRFAMs:TIGR01640 EMBL:AB017070 InterPro:IPR011043 SUPFAM:SSF50965
EMBL:BT003084 EMBL:AK227592 IPI:IPI00525493 RefSeq:NP_568622.1
UniGene:At.27993 ProteinModelPortal:Q9FHS6 SMR:Q9FHS6 IntAct:Q9FHS6
PRIDE:Q9FHS6 EnsemblPlants:AT5G43190.1 GeneID:834337
KEGG:ath:AT5G43190 TAIR:At5g43190 eggNOG:NOG250994
HOGENOM:HOG000112600 InParanoid:Q9FHS6 OMA:SCGFRWF PhylomeDB:Q9FHS6
ProtClustDB:CLSN2689919 Genevestigator:Q9FHS6 Uniprot:Q9FHS6
Length = 403
Score = 260 (96.6 bits), Expect = 2.8e-20, P = 2.8e-20
Identities = 106/385 (27%), Positives = 174/385 (45%)
Query: 109 STAEAMEQEIWKEFPEDLYEAVIARLPIATFFRFRSVCQKWNSLLKSHSF-SQHCAQVPQ 167
S+ ++ IW P L E +++ LP T RS+ + SL+ S SF S H +P
Sbjct: 38 SSPTNLDPNIWSNLPNHLLEHILSLLPFKTLLTLRSISRHLRSLILSPSFISDHSFSLPS 97
Query: 168 GIPWFYTITH-ENVNSGAMYDPSLKKWHH-PTISSLPTKMIILPVASAGGLVCF-LDIGH 224
F ++H ++ NS +++P+L W P SL ++S+ GL+CF L
Sbjct: 98 ----FLLLSHPQSFNSFPLFNPNLISWCTLPLPRSLSLTCASSLLSSSNGLLCFSLSPSS 153
Query: 225 -RNFYVCNPLTQSFKELPARSVKVWSRVAVGMTLNGNSTSSGYKILWVGCDGEYE----- 278
+ + NPLT+S +RS+K+ L+ ++ GYKI + C
Sbjct: 154 VSSLSIFNPLTRS-----SRSIKLPCYPFPFELLSLVTSPKGYKIFTL-CSSSSAASSRS 207
Query: 279 --IYDSLRNSWTRPGSMPSNIKLPVSLNFRSQAVSVDGILYFMRSDPEGIVSYNMVTGVW 336
+YDS SW + G + LP F V +G LYF RS+P IVS ++ G W
Sbjct: 208 VCLYDSGDRSWRKFGGVDQ--VLP--RGFNQDGVFYNGSLYFARSEPFLIVSVDLNDGKW 263
Query: 337 KQF----IIPTPLHLNDHTL-AECGGRIM-LVGLLTKNA-ATCVCIWELQKMTLLWKEVD 389
+ P + L ++ +I+ +VG + N + IWE ++ T W EV+
Sbjct: 264 TTATGDGVFPADDEITFARLVSDPEKKILYMVGGIGSNGICRSIKIWEFKEETESWIEVE 323
Query: 390 RMPNIWCLDF----YGKHVRMTCLGNKGLLMLSLRSRQMNRLVTYNVMSREWLKVPGCVV 445
+P+I C F Y + + CL +K ++ + + ++ ++V R W VP C
Sbjct: 324 TLPDIVCRKFTSVCYHNYEHVYCLWHKEMICVCCYN--WPEILFFHVGRRTWHWVPKC-- 379
Query: 446 PRGRKRQWIACGT---AFHPCLMAT 467
P +W +CG +F P L A+
Sbjct: 380 P-SLPEKW-SCGFRWFSFVPSLSAS 402
>TAIR|locus:2125889 [details] [associations]
symbol:AT4G33160 "AT4G33160" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181 SMART:SM00256
EMBL:CP002687 GenomeReviews:CT486007_GR SUPFAM:SSF81383
EMBL:AL161583 Gene3D:2.130.10.80 InterPro:IPR015916
InterPro:IPR011043 SUPFAM:SSF50965 EMBL:AL035525 EMBL:BX828112
EMBL:BT029208 IPI:IPI00536897 PIR:T05196 RefSeq:NP_567915.3
UniGene:At.43589 ProteinModelPortal:Q9SMZ3 SMR:Q9SMZ3
EnsemblPlants:AT4G33160.1 GeneID:829453 KEGG:ath:AT4G33160
TAIR:At4g33160 eggNOG:NOG244008 HOGENOM:HOG000240122
InParanoid:Q9SMZ3 OMA:RSPSKQY Genevestigator:Q9SMZ3 Uniprot:Q9SMZ3
Length = 457
Score = 243 (90.6 bits), Expect = 5.7e-18, P = 5.7e-18
Identities = 83/299 (27%), Positives = 139/299 (46%)
Query: 100 NRGKLAGSTSTAEAMEQEIW---KEFP-----EDLYEAVIARLPIATFFRFRSVCQKWNS 151
N G G + + E + EFP +D+ E V++ LP + FFR SVC++W S
Sbjct: 40 NMGFSTGKRKSRDEEEDRVSFFASEFPMDDLNDDVLERVLSWLPTSCFFRMSSVCKRWKS 99
Query: 152 LLKSHSFSQHCAQVPQGIPWFYTITHENVNSGAMYDPSLKKWHHPTISSL--PTKMIILP 209
S SF C+Q+P PWF+ I +++ +S ++D + W + + +P
Sbjct: 100 SQTSKSFKLACSQIPTRDPWFFMIDNDSNSSSFVFDSTENSWKNLNRRDFLHHHRQDFIP 159
Query: 210 VASAGGLVCFLDIGHRNFYVCNPLTQSFKELPARSVKVWSRV-AVGMTLNGNSTSSGYKI 268
VAS+GGL+C+ +F + NPLT S +++P++ + AV MT T S Y +
Sbjct: 160 VASSGGLLCYRCSISGDFLLRNPLTGSSRDIPSQDNNNNKPLQAVAMTTT-TVTPSSYTL 218
Query: 269 LWVGCDGE-----YEIYDSLRNSWTRPGSMPSNIKLPVSLNFRSQAVSVDGILYFMRSDP 323
+ + GE ++IY+S +SW++ + S SL+ S G +YF+
Sbjct: 219 VTIS--GEIPNLSFKIYESNADSWSKDQELESVKNNDSSLHDDYDTDS--GTVYFLSKQG 274
Query: 324 EGIV-SYNMVTGVWKQFIIPTPLHLNDHTLAECGGRIMLVGLLTKNAATCVCIWELQKM 381
+V S N+ KQ+ + + + D AE + G + T C EL K+
Sbjct: 275 NVVVASNNLQRSPSKQY--SSVITVTDE--AEIVYFLSSYGTIVACDLTKRCFTELPKL 329
>TAIR|locus:2082797 [details] [associations]
symbol:HWS "HAWAIIAN SKIRT" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0048513
"organ development" evidence=IMP] [GO:0006869 "lipid transport"
evidence=RCA] InterPro:IPR001810 InterPro:IPR015915 Pfam:PF00646
PROSITE:PS50181 SMART:SM00256 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132962 SUPFAM:SSF81383
Gene3D:2.120.10.80 GO:GO:0004842 GO:GO:0048513 EMBL:AF386994
EMBL:BT000054 IPI:IPI00532966 PIR:T47951 RefSeq:NP_001190155.1
RefSeq:NP_191718.1 UniGene:At.951 ProteinModelPortal:Q9M310
SMR:Q9M310 IntAct:Q9M310 STRING:Q9M310 PRIDE:Q9M310
EnsemblPlants:AT3G61590.1 EnsemblPlants:AT3G61590.2 GeneID:825332
KEGG:ath:AT3G61590 TAIR:At3g61590 eggNOG:NOG301211
HOGENOM:HOG000238968 InParanoid:Q9M310 OMA:DDLIYIQ PhylomeDB:Q9M310
ProtClustDB:CLSN2685255 Genevestigator:Q9M310 Uniprot:Q9M310
Length = 411
Score = 210 (79.0 bits), Expect = 6.7e-17, Sum P(2) = 6.7e-17
Identities = 46/121 (38%), Positives = 72/121 (59%)
Query: 123 PEDLYEAVIARLPIATFFRFRSVCQKWNSLLKSHSFSQHCAQ--VPQGIPWFYTITHENV 180
P+DL E +++ LPIA+ FR +VC++WN ++ S F + + V Q PW++ T +
Sbjct: 44 PDDLLERILSFLPIASIFRAGTVCKRWNEIVSSRRFLCNFSNNSVSQR-PWYFMFTTTDD 102
Query: 181 NSGAMYDPSLKKWHHPTISSLPTKMIILPVASAGGLVCFLDIGHRN-FYVCNPLTQSFKE 239
SG YDP ++KW+ + + T VAS+ GLVCF+D RN YV NP+T+ ++
Sbjct: 103 PSGYAYDPIIRKWYSFDLPCIETSNWF--VASSCGLVCFMDNDCRNKIYVSNPITKQWRT 160
Query: 240 L 240
L
Sbjct: 161 L 161
Score = 64 (27.6 bits), Expect = 6.7e-17, Sum P(2) = 6.7e-17
Identities = 41/174 (23%), Positives = 72/174 (41%)
Query: 307 SQAVSVDGILYFM-----RSDPE-GIVSYNMVT------GVWKQFIIPTPLHLNDHTLAE 354
+++V + +LYFM SD G+++ N+ + G+ + IP P L L
Sbjct: 239 NESVICNNVLYFMIYSTGGSDHRHGLIASNLSSIGSPSSGILMRSFIPMPCSLTCGRLMN 298
Query: 355 CGGRIMLVGLLTKNAATCVC----IWELQKMTLLWKEVDRMPNIWCLDFYGKHVRMTCLG 410
R+++VG + K+ V IW L+ W E+ +MP + F G
Sbjct: 299 LRERLVIVGGIGKHDRPEVIKGIGIWVLKGKE--WVEMAKMPQRFFQGFGEFDEVFASSG 356
Query: 411 NKGLLMLSLRSRQMNRLVTYNVMSREWLKVPGCVVPRGRKRQWIACGTAFHPCL 464
L+ + +S L+T+++ + W C V + Q + G F P L
Sbjct: 357 TDDLVYI--QSYGSPALLTFDMNLKYWRWSQKCPVTKKFPLQ-LFTGFCFEPRL 407
>TAIR|locus:2157834 [details] [associations]
symbol:AT5G49610 "AT5G49610" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001810 PROSITE:PS50181 SMART:SM00256
UniPathway:UPA00143 EMBL:CP002688 GenomeReviews:BA000015_GR
SUPFAM:SSF81383 GO:GO:0016567 EMBL:AB023033 InterPro:IPR017451
TIGRFAMs:TIGR01640 HSSP:Q13309 EMBL:BT026025 EMBL:AY084264
IPI:IPI00519559 RefSeq:NP_199772.1 UniGene:At.49149
UniGene:At.66766 ProteinModelPortal:Q9FGY4 SMR:Q9FGY4 IntAct:Q9FGY4
STRING:Q9FGY4 EnsemblPlants:AT5G49610.1 GeneID:835023
KEGG:ath:AT5G49610 TAIR:At5g49610 eggNOG:NOG277254
HOGENOM:HOG000090895 InParanoid:Q9FGY4 OMA:LCCSSIP PhylomeDB:Q9FGY4
ProtClustDB:CLSN2686983 Genevestigator:Q9FGY4 Uniprot:Q9FGY4
Length = 359
Score = 172 (65.6 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 69/298 (23%), Positives = 142/298 (47%)
Query: 122 FPEDLYEAVIARLPIATFFRFRSVCQKWNSLLKSHSFSQHCAQVPQGIPWFYTITHENVN 181
FP+++ ++ARLP+ + FRF+SVC+ W L F+ Q+ + + + +
Sbjct: 9 FPDEVILQILARLPVKSLFRFKSVCKSWYRLPSDKYFTSLFNQL--SVKEQLLVAEVSDS 66
Query: 182 SGAMYDPSLKKWHHPTISSLPTKMIILPVASAGGLVCFLDIGHRN-FYVCNPLTQSFKEL 240
S + +L+ ++ + ++ I S+ GL+C I + +YVCNP T+ +++L
Sbjct: 67 SSLICVDNLRGVSELSLDFVRDRVRIR--VSSNGLLCCSSIPEKGVYYVCNPSTREYRKL 124
Query: 241 PARSVKVWSR-------VAVGMT--LNGNSTS---SGY-KILWVGCDGEYE--IYDSLRN 285
P + +R VG+ L+ N + +GY + DG + ++DS N
Sbjct: 125 PKSRERPVTRFYPDGEATLVGLACDLSKNKFNVVLAGYHRSFGQRPDGSFICLVFDSESN 184
Query: 286 SWTRPGSMPSNIKLPVSLNFRSQAVSVDGILYFMRSDPEGIVSYNMVTGVWKQFIIPTPL 345
W + S+ ++ ++Q V V+G+L+++ S I++ ++ VW++ +P +
Sbjct: 185 KWRKFVSVLEECSF-THMS-KNQVVFVNGMLHWLMSGLCYILALDVEHDVWRKISLPDEI 242
Query: 346 HLNDHTLAECGGRIMLV---GLLTKNAATCVC--IWELQKM-TLLWKEVDRMPNIWCL 397
+ + G R+ L+ G L+ + V IW++ + T W VD + ++ C+
Sbjct: 243 RIGNGG----GNRVYLLESDGFLSVIQLSDVWMKIWKMSEYETETWSVVDSI-SLRCI 295
>TAIR|locus:2094453 [details] [associations]
symbol:AT3G25460 "AT3G25460" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181
SMART:SM00256 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF81383 EMBL:AB025639 InterPro:IPR006527 InterPro:IPR017451
Pfam:PF07734 TIGRFAMs:TIGR01640 HOGENOM:HOG000112505
IPI:IPI00518636 RefSeq:NP_189173.1 UniGene:At.65154
ProteinModelPortal:Q9LSV6 SMR:Q9LSV6 EnsemblPlants:AT3G25460.1
GeneID:822130 KEGG:ath:AT3G25460 TAIR:At3g25460 eggNOG:NOG283910
InParanoid:Q9LSV6 OMA:HKAPRQS PhylomeDB:Q9LSV6
ProtClustDB:CLSN2684681 Genevestigator:Q9LSV6 Uniprot:Q9LSV6
Length = 361
Score = 151 (58.2 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 57/210 (27%), Positives = 93/210 (44%)
Query: 121 EFPEDLYEAVIARLPIATFFRFRSVCQKWNSLLKSHSF-SQHCAQVPQG---IPWF-YTI 175
E PEDL ++ R+P + R RS C+ WN L F S+HC + P+ + W +
Sbjct: 5 ELPEDLLVEILCRVPATSLKRLRSTCKLWNHLYNDKRFKSKHCHKAPRQSLILMWKNFGF 64
Query: 176 THENVN----SGAMYDPSLKKW-HHPTISSLPTKMIILPVASAGGLVCFLDIGHRN--FY 228
+ ++N S L HH ++ P+ GL+ +++ N
Sbjct: 65 SSISINLQRVSPIEVTGELNLIDHHSSLGMFRNS----PLCQTSGLLLCVNVEKINTRLV 120
Query: 229 VCNPLTQSFKELPARSVKVWSRVAVGMTLNGNSTSSGYKILWVGCDG--EYEIYDSLRNS 286
V NP T K + R + A+G + S ++ YKIL G G E+EIY+ NS
Sbjct: 121 VWNPCTGKTKWIQHRRMGYICNYALGSYQDKKSDNNSYKILSHGIYGGQEFEIYEINSNS 180
Query: 287 WT-RPGSMPSNIKLP-VSLNFRSQAVSVDG 314
W ++ S++ + VSL ++ + DG
Sbjct: 181 WRILDVTVDSSLYIENVSLKGKTYWFATDG 210
>TAIR|locus:2162286 [details] [associations]
symbol:AT5G42350 "AT5G42350" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001810 InterPro:IPR006652
InterPro:IPR015915 Pfam:PF00646 PROSITE:PS50181 SMART:SM00256
SMART:SM00612 EMBL:CP002688 GenomeReviews:BA000015_GR
SUPFAM:SSF81383 Gene3D:2.120.10.80 EMBL:AB016888 EMBL:AY074568
EMBL:AF436832 EMBL:BT010181 IPI:IPI00543004 RefSeq:NP_199050.1
UniGene:At.49122 ProteinModelPortal:Q9FII2 SMR:Q9FII2 STRING:Q9FII2
EnsemblPlants:AT5G42350.1 GeneID:834241 KEGG:ath:AT5G42350
TAIR:At5g42350 eggNOG:NOG248789 HOGENOM:HOG000090609
InParanoid:Q9FII2 OMA:MTHELDA PhylomeDB:Q9FII2
ProtClustDB:CLSN2686584 Genevestigator:Q9FII2 Uniprot:Q9FII2
Length = 563
Score = 109 (43.4 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 23/76 (30%), Positives = 36/76 (47%)
Query: 123 PEDLYEAVIARLPIATFFRFRSVCQKWNSLLKSHSFSQHCAQVPQGIPWFYTIT--HENV 180
P+D+ E + RLP+ + VC+KW S+ + F Q + PW + +
Sbjct: 136 PDDILEMCLMRLPLTSLLNAHLVCKKWQSMANTQRFLQMRREGSFQTPWLFLFAALKDGC 195
Query: 181 NSGAM--YDPSLKKWH 194
+SG + YD S KWH
Sbjct: 196 SSGDIHGYDVSQDKWH 211
Score = 90 (36.7 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 40/156 (25%), Positives = 66/156 (42%)
Query: 257 LNGNSTSSGYKILWVGCDGEY-------EIYDSLRNSWTRPGSMPSNIKLPVSLNFRSQA 309
LN NS S + ++ +G G + EIYDS N+W+ M +LP+ S
Sbjct: 346 LNRNS-SKRFVLIAIGGTGLFDEPLDSGEIYDSATNTWSE---MQ---RLPMGFGVVSCG 398
Query: 310 VSVDGILYFMRSDPEGIVSYNMVTGVW---KQFIIPTPLHLNDHTLAECGGRIMLV---- 362
+ +GI Y S+ + + Y++ G W + IP +H L C R+ ++
Sbjct: 399 IICNGIFYAY-SENDKLSGYDIERGFWITIQTSPIPPRVHEFYPKLVSCNHRLFMLSVSW 457
Query: 363 -----GLLTKNAATCVCIWELQKMTLLWKEVDRMPN 393
G + + +WEL + L W EV P+
Sbjct: 458 CDEGDGQIGRRNKAVRKLWELDLVYLTWTEVSVHPD 493
>TAIR|locus:2162301 [details] [associations]
symbol:AT5G42360 "AT5G42360" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001810 InterPro:IPR006652
InterPro:IPR015915 Pfam:PF00646 PROSITE:PS50181 SMART:SM00256
SMART:SM00612 EMBL:CP002688 GenomeReviews:BA000015_GR
SUPFAM:SSF81383 Gene3D:2.120.10.80 EMBL:AB016888 eggNOG:NOG248789
HOGENOM:HOG000090609 ProtClustDB:CLSN2686584 EMBL:AY143953
EMBL:AF367282 EMBL:AY086733 IPI:IPI00525219 RefSeq:NP_199051.1
UniGene:At.22844 ProteinModelPortal:Q9FII1 SMR:Q9FII1 STRING:Q9FII1
EnsemblPlants:AT5G42360.1 GeneID:834242 KEGG:ath:AT5G42360
TAIR:At5g42360 InParanoid:Q9FII1 OMA:GTNWSHI PhylomeDB:Q9FII1
Genevestigator:Q9FII1 Uniprot:Q9FII1
Length = 563
Score = 109 (43.4 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 23/76 (30%), Positives = 36/76 (47%)
Query: 123 PEDLYEAVIARLPIATFFRFRSVCQKWNSLLKSHSFSQHCAQVPQGIPWFYTIT--HENV 180
P+D+ E + RLP+ + VC+KW S+ + F Q + PW + +
Sbjct: 136 PDDILEMCLMRLPLTSLLNAHLVCKKWQSMANTQRFLQMRREGSFQTPWLFLFAALKDGC 195
Query: 181 NSGAM--YDPSLKKWH 194
+SG + YD S KWH
Sbjct: 196 SSGDIHGYDVSQDKWH 211
Score = 90 (36.7 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 40/156 (25%), Positives = 66/156 (42%)
Query: 257 LNGNSTSSGYKILWVGCDGEY-------EIYDSLRNSWTRPGSMPSNIKLPVSLNFRSQA 309
LN NS S + ++ +G G + EIYDS N+W+ M +LP+ S
Sbjct: 346 LNRNS-SKRFVLIAIGGTGIFDEPLDSGEIYDSATNTWSE---MQ---RLPMGFGVVSCG 398
Query: 310 VSVDGILYFMRSDPEGIVSYNMVTGVW---KQFIIPTPLHLNDHTLAECGGRIMLV---- 362
+ +GI Y S+ + + Y++ G W + IP +H L C R+ ++
Sbjct: 399 IICNGIFYAY-SENDKLSGYDIERGFWITIQTSPIPPRVHEFYPKLVSCNHRLFMLSVSW 457
Query: 363 -----GLLTKNAATCVCIWELQKMTLLWKEVDRMPN 393
G + + +WEL + L W EV P+
Sbjct: 458 CDEGDGQIGRRNKAVRKLWELDLVYLTWTEVSVHPD 493
>TAIR|locus:2092160 [details] [associations]
symbol:AT3G26010 "AT3G26010" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181
SMART:SM00256 EMBL:CP002686 EMBL:AB023041 SUPFAM:SSF81383
EMBL:DQ446701 IPI:IPI00542440 RefSeq:NP_189230.1 UniGene:At.27941
ProteinModelPortal:Q9LU90 SMR:Q9LU90 EnsemblPlants:AT3G26010.1
GeneID:822198 KEGG:ath:AT3G26010 TAIR:At3g26010 eggNOG:NOG298717
InParanoid:Q9LU90 OMA:STIESVY PhylomeDB:Q9LU90
ProtClustDB:CLSN2684708 ArrayExpress:Q9LU90 Genevestigator:Q9LU90
Uniprot:Q9LU90
Length = 414
Score = 144 (55.7 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 68/286 (23%), Positives = 122/286 (42%)
Query: 126 LYEAVIARLPIATFFRFRSVCQKWNSLLKSHSFSQHCAQVPQGIPWFYTITHENVNSGAM 185
++ ++ARLP+ RF+SV + W S ++S F + V + +++
Sbjct: 14 IWTEILARLPLRIIARFKSVSKTWKSTIESVYFRRLFVSVHRKSSTSWSLMWYGQKDLVG 73
Query: 186 YDPSLKKWHHPTISS--LPTKMIILPVASAGGLVCFLDIGHRNFYVCNPLTQSFKELPAR 243
+ + W P S +P+ + I+ S+ GLV + +V NP+ Q + ++P
Sbjct: 74 FH-GCETWGLPKSLSFYIPSSLCIIE-GSSHGLVLISENDDDCCFVGNPVLQQWIKIPPP 131
Query: 244 SVKVWSRVAVGMTLNGNSTSSGYKIL----------WVGCDGEYEIYDSLRNSWTRPGSM 293
V S + ++ + G+K++ +V C +Y S WT
Sbjct: 132 PVHS-SVFGLVSRVDDDGFVLGFKVVKLAEVIVTNNYVSCSLSVFVYSSETGIWTC---- 186
Query: 294 PSNIKLPVSL-NFRSQAVSVDGILYFMR-SDPEGIVSYNMVTGVWKQF-IIPTPLHLN-- 348
I P + NF S ++DG +YF S+P +V+Y+ + + QF +IP P H N
Sbjct: 187 -KTIHCPYQITNFGS--FTLDGTIYFDHLSEPGVLVAYDFYSEISDQFWVIPLPDHPNHG 243
Query: 349 ---DH--TLAECGGRIMLVGLLTKNAATCVCIWELQKMT---LLWK 386
D L G +M + L ++++ W L + LLWK
Sbjct: 244 FNSDFKGALTTSQGFVMYIRTLAQSSSNVFKAWRLNNDSTWQLLWK 289
>TAIR|locus:2083118 [details] [associations]
symbol:AT3G49980 "AT3G49980" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181
SMART:SM00256 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF81383 EMBL:AL132978 InterPro:IPR006527 InterPro:IPR017451
Pfam:PF07734 TIGRFAMs:TIGR01640 HOGENOM:HOG000112505
InterPro:IPR011043 SUPFAM:SSF50965 IPI:IPI00546427 PIR:T45851
RefSeq:NP_190567.1 UniGene:At.65265 ProteinModelPortal:Q9SN20
SMR:Q9SN20 EnsemblPlants:AT3G49980.1 GeneID:824160
KEGG:ath:AT3G49980 TAIR:At3g49980 eggNOG:NOG288559
InParanoid:Q9SN20 PhylomeDB:Q9SN20 Genevestigator:Q9SN20
Uniprot:Q9SN20
Length = 382
Score = 142 (55.0 bits), Expect = 9.4e-07, P = 9.4e-07
Identities = 67/288 (23%), Positives = 122/288 (42%)
Query: 123 PEDLYEAVIARLPIATFFRFRSVCQKWNSLLKSHSFSQ-HCAQVPQGIPWFYTITHE--- 178
P++L E ++ R+P + + R C++WN L +FS+ H + P+ + T+ E
Sbjct: 6 PQELLEEILCRVPATSLKQLRLTCKEWNRLFNDRTFSRKHFDKAPK--QFLITVLEERCR 63
Query: 179 ------NVNSGAMYDPSLKKWHHPTISSLPTKMIILPVASAGGL-VCFLDIGHRNFYVCN 231
N++SG + + S +++II+ + GL VC + + V N
Sbjct: 64 LSSLSINLHSGFPSEEFTGELSPIDYHSNSSQVIIMKIFHCDGLFVCTI-LKDTRIVVWN 122
Query: 232 PLTQSFKELPARSV--KVWSRVAVGMTLNGNSTSSGYKIL-WVGC---DGEYEIYDSLRN 285
P T K + + +G + S+ YKIL + G D E++IYD N
Sbjct: 123 PCTGQKKWIQTGENLDENGQDFVLGYYQDNKSSDKSYKILSYKGYNYGDQEFKIYDIKSN 182
Query: 286 SWTRPGSMPSNIKLPVSLNFRSQAVSVDGILYF----MRSDPEGIVSYNMVTGVWKQFII 341
+W P ++R VS+ G Y+ ++ + G++S++ T +++ +
Sbjct: 183 TWRNLDVTPIPGNYFTCSDYR---VSLKGNTYWFAYDLKDEQLGLISFDYTTERFERLWL 239
Query: 342 PTPLHLNDHTLA-ECGGRIMLVGLLTKNAATCVCIWELQKMTLLWKEV 388
P ++DH + G L +L A IW KM KE+
Sbjct: 240 PFQCDISDHDYSLSVVGEEKLSVVLQLKDAPRREIWITNKMDDETKEM 287
>TAIR|locus:2045039 [details] [associations]
symbol:AT2G04920 "AT2G04920" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181 SMART:SM00256
EMBL:CP002685 GenomeReviews:CT485783_GR SUPFAM:SSF81383
EMBL:AC006955 InterPro:IPR006527 InterPro:IPR017451 Pfam:PF07734
TIGRFAMs:TIGR01640 EMBL:AC007211 HOGENOM:HOG000112505
IPI:IPI00518998 PIR:B84463 RefSeq:NP_565318.1 UniGene:At.52641
ProteinModelPortal:Q9SI34 SMR:Q9SI34 PRIDE:Q9SI34
EnsemblPlants:AT2G04920.1 GeneID:815039 KEGG:ath:AT2G04920
TAIR:At2g04920 eggNOG:NOG329790 InParanoid:Q9SI34 OMA:WINFEND
PhylomeDB:Q9SI34 ProtClustDB:CLSN2917058 Genevestigator:Q9SI34
Uniprot:Q9SI34
Length = 376
Score = 140 (54.3 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 62/246 (25%), Positives = 107/246 (43%)
Query: 121 EFPEDLYEAVIARLPIATFFRFRSVCQKWNSLLKSHSFSQ-HCAQVPQG---IPWF-YTI 175
+ P DL E +++R+P + R R C++WNSL K+ F++ H + P+ + W YT+
Sbjct: 3 DLPPDLVEDILSRVPATSLKRLRFTCKQWNSLFKNRRFTEKHFCKAPKQSHVLLWKDYTV 62
Query: 176 THENVN---SGAMYD----PSLKKWHHPTISSLPTKMIILPVASAGGLVCFLDIGHRNFY 228
++N SG+ + SLK H+ + ++ I V GL+ HR
Sbjct: 63 CPMSINLNFSGSSIEFKSVLSLKDSHYNS-----EQVYIAKVFHCDGLLLCTTKDHR-LL 116
Query: 229 VCNPLTQSFKELPARS-VKVWSRVAVGMTLNGNSTSSGYKIL--WVGC-----DG-EYEI 279
V NP + + + K +SR ++G N + YKIL W G Y I
Sbjct: 117 VWNPCLGETRWINFENDYKPYSRFSLGY--KNNKSCRSYKILRFWTSYLTPNHIGLRYNI 174
Query: 280 YDSLRNSWTRPGSMPSNIKLPVSLNFRSQAVSVDGILYFMRSDPEG--IVSYNMVTGVWK 337
Y+ +SW + + L L VS G Y++ D E ++ ++ +K
Sbjct: 175 YEFTTDSWR---VLIDKVSLNYFLIESENGVSFKGNTYWLALDEETNFLLGFDFTMERFK 231
Query: 338 QFIIPT 343
+ +P+
Sbjct: 232 RLCLPS 237
>TAIR|locus:2025247 [details] [associations]
symbol:AT1G76920 "AT1G76920" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006869 "lipid
transport" evidence=RCA] [GO:0048767 "root hair elongation"
evidence=RCA] InterPro:IPR001810 InterPro:IPR011498
InterPro:IPR015915 Pfam:PF00646 Pfam:PF07646 PROSITE:PS50181
SMART:SM00256 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 SUPFAM:SSF81383
GO:GO:0016567 Gene3D:2.120.10.80 EMBL:AC002291 EMBL:AY065102
EMBL:BT008455 EMBL:AY085473 IPI:IPI00535488 PIR:A96798
RefSeq:NP_565142.1 UniGene:At.21630 UniGene:At.67164
ProteinModelPortal:O49279 SMR:O49279 IntAct:O49279 STRING:O49279
ProMEX:O49279 EnsemblPlants:AT1G76920.1 GeneID:844027
KEGG:ath:AT1G76920 TAIR:At1g76920 eggNOG:NOG324999
HOGENOM:HOG000241138 InParanoid:O49279 OMA:VGSPWRS PhylomeDB:O49279
ProtClustDB:CLSN2689248 Genevestigator:O49279 Uniprot:O49279
Length = 374
Score = 101 (40.6 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 69/283 (24%), Positives = 110/283 (38%)
Query: 185 MYDPSLKKWHHPTISSLPTKMIILPVASAGGLVCF----LDIGH--RNFYVCNPLTQSFK 238
+YDP +W + LP + PVAS+ GL+ +D+ ++ CNPLT+ FK
Sbjct: 86 VYDPEQNQWFRFNLDFLPFRSP-QPVASSSGLIYLWGDSIDLAESSKSLVACNPLTRQFK 144
Query: 239 ELPARSVKVWSRVAVGMTLNGNSTSSGYKILWVGCDGEYEIYDSLRNSWTRPGS-MPSNI 297
LP WSR + + N ++ + G + N W + S +PS
Sbjct: 145 VLPQLG-SAWSRHGTVLVDSVNRVMVLTELAALYYSGTV-----VANQWLKFSSNLPSKP 198
Query: 298 KLPVSLNFRSQAVSVDGI-------LYFMRSDPEGIVSYNMVT---GVWKQF--IIPTPL 345
+ PV ++ A+ G L+ + I N V W II P
Sbjct: 199 RSPVLMSSSVFALCDVGSPWRSQWKLFSCKLTNLTITHTNWVCLEKHEWGDIFDIIKRPR 258
Query: 346 HLN---DHTLAECGGRIMLVGLLTKN-AATCVCIWELQKMTLLWKEVDRMPNIWCLDFYG 401
L D L GG L + N A + + I L +L W+E RMP F
Sbjct: 259 LLRGNGDSKLLMIGG---LKSTFSLNPACSTILILRLDLESLEWEEAGRMPLEMYRGFQ- 314
Query: 402 KHVRMTCLGNKGLLMLSLRSRQMNRLVTYNVMSR-EWLK-VPG 442
+ + G + S +++M +L ++ W++ VPG
Sbjct: 315 ESSKFKVFGGGDRVYFS--AKRMGKLAMWDCWQGWRWIEGVPG 355
Score = 83 (34.3 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 30/109 (27%), Positives = 51/109 (46%)
Query: 123 PEDLYEAVIARLPIATFFRFRSVCQKWNSLLKSHSFSQHCA-QVPQGI----PWFYTITH 177
P+ L++ + + LPI RSVC+ +N LL S F + + + P + P + +H
Sbjct: 11 PDSLHQ-IFSSLPIRDIMICRSVCKFFNQLLTSQCFIEIISTRPPLNLLALRPPHHHHSH 69
Query: 178 ENVNSGA---------MYDPSLKKWHHPTISSLPTKMIILPVASAGGLV 217
+ +G +YDP +W + LP + PVAS+ GL+
Sbjct: 70 RHSGNGHATNIRPYIHVYDPEQNQWFRFNLDFLPFRSP-QPVASSSGLI 117
>TAIR|locus:2090644 [details] [associations]
symbol:AT3G19410 "AT3G19410" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181
SMART:SM00256 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF81383 EMBL:AB025624 InterPro:IPR006527 InterPro:IPR017451
Pfam:PF07734 TIGRFAMs:TIGR01640 HOGENOM:HOG000112505
InterPro:IPR011043 SUPFAM:SSF50965 IPI:IPI00522281
RefSeq:NP_188572.1 UniGene:At.53388 ProteinModelPortal:Q9LT76
SMR:Q9LT76 EnsemblPlants:AT3G19410.1 GeneID:821475
KEGG:ath:AT3G19410 TAIR:At3g19410 eggNOG:NOG322707
InParanoid:Q9LT76 OMA:RFIDDIC PhylomeDB:Q9LT76
ProtClustDB:CLSN2915375 Genevestigator:Q9LT76 Uniprot:Q9LT76
Length = 373
Score = 137 (53.3 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 65/240 (27%), Positives = 104/240 (43%)
Query: 121 EFPEDLYEAVIARLPIATFFRFRSVCQKWNSLLKS-HSFSQ-HCAQVP-QGIPWFYT--- 174
E P+DL E ++ +P R RS C+ WN L K F++ H + Q +P T
Sbjct: 5 ELPKDLIEEILCYVPATYLKRLRSTCKGWNRLFKDDRRFAKKHYDKAAKQFLPLMSTNEE 64
Query: 175 ITHENVN-SGAMYDPSLKKWHHPTISSLPTKMIILPVA----SAGGLVCFLDIGHRNFYV 229
+ +VN G + PSL+ P + +K + ++ S G L+CF G + V
Sbjct: 65 LCAMSVNLHGTI--PSLEVKDKPWLFVSDSKHCDIEISRIFHSGGLLLCFSRDGEISIIV 122
Query: 230 CNPLTQSFKELPARSVKVWSR-VAVGMTLNGNSTSSGYKILWVGCDG-EYEIYDSLRNSW 287
NPLT + + R+ + R +G T YKIL D ++EI++ +SW
Sbjct: 123 WNPLTSETRLIRTRNRRDKGRNFVLGYYQEDKKTY--YKILSFYLDSKDFEIFEFNSDSW 180
Query: 288 TRPGSMPSNIKLPVSLNFRSQAVSVDGILYFMRSDPEGI--VSYNMVTGVWKQFIIPTPL 345
+I +SL + Q VS+ G Y D + + Y+ T + +P PL
Sbjct: 181 R----FIDDICPGLSLLYSDQCVSLKGNTYMFAIDDLSVSLLKYDFST----ETSVPVPL 232
>TAIR|locus:2093683 [details] [associations]
symbol:AT3G16880 "AT3G16880" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181
SMART:SM00256 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF81383 EMBL:AP001308 InterPro:IPR006527 InterPro:IPR017451
Pfam:PF07734 TIGRFAMs:TIGR01640 HOGENOM:HOG000112505
IPI:IPI00522190 RefSeq:NP_188313.1 UniGene:At.53342
ProteinModelPortal:Q9LIB4 SMR:Q9LIB4 EnsemblPlants:AT3G16880.1
GeneID:820943 KEGG:ath:AT3G16880 TAIR:At3g16880 InParanoid:Q9LIB4
OMA:HAYIYAI PhylomeDB:Q9LIB4 Genevestigator:Q9LIB4 Uniprot:Q9LIB4
Length = 365
Score = 136 (52.9 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 71/281 (25%), Positives = 114/281 (40%)
Query: 121 EFPEDLYEAVIARLPIATFFRFRSVCQKWNSLLKSHSFSQHCAQVPQGIPWFYTITHENV 180
+ P DL E +++R P+ + R C+KWN+L K SF++ + F I +
Sbjct: 6 KLPNDLLEEILSRSPLYSMRAIRLTCKKWNTLAKEESFTKKQLVQTKAAKEFMVIMMMD- 64
Query: 181 NSGAMYDPSLKKWHHPTISSLPTKMIILPVASA-----GGLVCFL-DIGHRNFYVCNPLT 234
+ + + +L K S II P+ GGLVC + V NP
Sbjct: 65 SKFCLMNINLNKEEDVEPSIKCNGKIINPIGMCRVYHCGGLVCITKSFSNTRDVVWNPYL 124
Query: 235 QSFKELPARSVKVWSRVAVGMTLNGNSTSSGYKIL-----WVGCDGE---YEIYDSLRNS 286
+ + RS + A+G + S YKIL ++ D E YEIY+ NS
Sbjct: 125 GQTRWIKPRSHHAYI-YAIGYETKKSCRS--YKILSSEHNYINIDDERVDYEIYELDSNS 181
Query: 287 WTRPGSMPSNIKLPVSLNFRSQAVSVDGILYFMRSDPEG--IVSYNMVTGVWKQFIIPTP 344
W R + SN + F VSV G Y +D G ++S++ T + +P P
Sbjct: 182 W-RALDVNSNW----ATAFYKMDVSVKGNSYTY-TDYRGDFLISFDFTTERFGP-TLPLP 234
Query: 345 LHLNDHTLAECGGRIMLVGLLTKNAATCVCIWELQKMTLLW 385
H + CG + L + + A + + +M + W
Sbjct: 235 FH------SRCGDIVALSSVREEKLAVLLHRCNISRMEI-W 268
>TAIR|locus:2038618 [details] [associations]
symbol:AT2G27520 "AT2G27520" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181
SMART:SM00256 EMBL:CP002685 GenomeReviews:CT485783_GR
SUPFAM:SSF81383 EMBL:AC006232 EMBL:AC005824 InterPro:IPR006527
InterPro:IPR017451 Pfam:PF07734 TIGRFAMs:TIGR01640
HOGENOM:HOG000112505 EMBL:AY954803 EMBL:AY464585 IPI:IPI00533392
PIR:H84673 RefSeq:NP_565653.1 UniGene:At.66429
ProteinModelPortal:Q9ZNQ3 SMR:Q9ZNQ3 EnsemblPlants:AT2G27520.1
GeneID:817298 KEGG:ath:AT2G27520 TAIR:At2g27520 eggNOG:NOG303287
InParanoid:Q9ZNQ3 OMA:FELKSNS PhylomeDB:Q9ZNQ3
ProtClustDB:CLSN2917160 Genevestigator:Q9ZNQ3 Uniprot:Q9ZNQ3
Length = 347
Score = 134 (52.2 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 59/237 (24%), Positives = 100/237 (42%)
Query: 121 EFPEDLYEAVIARLPIATFFRFRSVCQKWNSLLKSHSF--SQHCAQVPQGIPWFYTITHE 178
+ P DL + +++RLP + R R C++WN+L K F Q Q + +
Sbjct: 5 DLPWDLVDEILSRLPATSLGRLRFTCKRWNALFKDPEFITKQFHKAAKQDLVLMLS---- 60
Query: 179 NVNSGAMYDPSLKKWHHPTISSLPTKMIILPVASAGGLV-CFLDIGHRN-FYVCNPLTQS 236
N G +Y S + +P + I V GL+ C + G++ V NP T
Sbjct: 61 --NFG-VYSMSTN------LKEIPNNIEIAQVFHCNGLLLCSTEEGNKTKLVVVNPCTGQ 111
Query: 237 FKELPARSVKVWSR-VAVGMTLNGNSTS-SGYKILWV--GCDGEYEIYDSLRNSWTRPGS 292
+ + R+ ++ +A+G N S YKIL + GC EI++ NSW
Sbjct: 112 TRWIEPRTDYNYNHDIALGYGNNSTKKSYDSYKILRITYGCK-LVEIFELKSNSWR---- 166
Query: 293 MPSNIKLPVSLNFRSQAVSVDGILYFMRSDPEGIVSYNMVTGVWKQFIIPTPLHLND 349
+ S + V ++ VS G Y++ I+S++ T ++ +P P D
Sbjct: 167 VLSKVHPNVEKHYYG-GVSFKGNTYWLSYTKFNILSFDFTTETFRS--VPLPFLYQD 220
>TAIR|locus:2097483 [details] [associations]
symbol:AT3G59610 "AT3G59610" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181
SMART:SM00256 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF81383 InterPro:IPR006527 InterPro:IPR017451 Pfam:PF07734
TIGRFAMs:TIGR01640 HOGENOM:HOG000112505 EMBL:AL138659
IPI:IPI00543700 PIR:T49302 RefSeq:NP_191520.1 UniGene:At.23114
ProteinModelPortal:Q9M1A7 SMR:Q9M1A7 EnsemblPlants:AT3G59610.1
GeneID:825130 KEGG:ath:AT3G59610 TAIR:At3g59610 InParanoid:Q9M1A7
PhylomeDB:Q9M1A7 ProtClustDB:CLSN2684897 Genevestigator:Q9M1A7
Gene3D:2.100.10.30 InterPro:IPR001229 Pfam:PF01419 SMART:SM00915
SUPFAM:SSF51101 Uniprot:Q9M1A7
Length = 521
Score = 133 (51.9 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 66/255 (25%), Positives = 111/255 (43%)
Query: 121 EFPEDLYEAVIARLPIATFFRFRSVCQKWNSLLKSHSFSQHCAQVPQGIPWFYTITHENV 180
+ P DL +++ LPI RFR VC++WN+L K F + + P F + +
Sbjct: 7 DLPYDLEGEILSHLPIQILARFRCVCKRWNTLFKERRFFN--SDLGLARPQFILLAESKI 64
Query: 181 NS-GAMYD-PSLKKWHHPTISSLPTKMIILP--VASAGGLVCFLDIGHRNFYVCNPLTQS 236
S D PS++ + P S +P + +P V GL FL +CNP +
Sbjct: 65 CSVDVNLDGPSIEVHNLP--SDIPGYKLYMPMHVEYCDGL--FLYATCYGIGICNPWLRQ 120
Query: 237 FKELPARSVKVWSRVAVGMTLNGNSTSSGYKILWVGCDGEYEIYDSLRNSWTRPGSMP-S 295
+ + S + + GM + + YKIL G Y ++ S T GS
Sbjct: 121 IRWFKS-SYEGYD--FSGMGYDNSRQDKHYKIL-----GSYCTNTTMNASVTELGSDAWK 172
Query: 296 NIKLPV---SLNFRSQAVSVDGILYFMRSDPEG----IVSYNMVTGVWKQF-IIPTPLHL 347
+ + +L+ +VS++G LY++ + E I S++ T +K + I+PT
Sbjct: 173 SYEFAFHSWNLSMSPYSVSLNGNLYWVAYNHESRDYFIQSFDFSTVSFKHYCILPTK--- 229
Query: 348 NDHTLAECGGRIMLV 362
N H +C GR + +
Sbjct: 230 NGHR--QCDGRSLAI 242
>TAIR|locus:2077452 [details] [associations]
symbol:AT3G07870 "AT3G07870" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181 SMART:SM00256
GO:GO:0009506 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF81383 EMBL:AC013483 InterPro:IPR017451 TIGRFAMs:TIGR01640
InterPro:IPR013187 Pfam:PF08268 EMBL:AF424614 EMBL:BT025979
IPI:IPI00535744 RefSeq:NP_566322.1 UniGene:At.25406
ProteinModelPortal:Q9SFC7 SMR:Q9SFC7 EnsemblPlants:AT3G07870.1
GeneID:819978 KEGG:ath:AT3G07870 TAIR:At3g07870 eggNOG:NOG323347
HOGENOM:HOG000090481 InParanoid:Q9SFC7 OMA:DSLYNDS PhylomeDB:Q9SFC7
ProtClustDB:CLSN2688159 Genevestigator:Q9SFC7 Uniprot:Q9SFC7
Length = 417
Score = 117 (46.2 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 43/159 (27%), Positives = 68/159 (42%)
Query: 120 KEFPEDLYEAVIARLPIATFFRFRSVCQKWNSLLKSHSFSQHCAQVPQGIPWFYTITHEN 179
+ PED+ + +RLPI++ R VC+ W S+L H + P P
Sbjct: 26 ESLPEDIIADIFSRLPISSIARLMFVCRSWRSVLTQHGRLSSSSSSPTK-PCLLLHCDSP 84
Query: 180 VNSGAMY-DPS-------LKKWHHPTISSLPTKMIILPVASAGGLVCFLD-IGHRNFYVC 230
+ +G + D S KK+ SS+P + V S GL+C D + + + Y+
Sbjct: 85 IRNGLHFLDLSEEEKRIKTKKFTLRFASSMPEFDV---VGSCNGLLCLSDSLYNDSLYLY 141
Query: 231 NPLTQSFKELPARSVKVWSRVAVGMTLNGNSTSSGYKIL 269
NP T + ELP S K + V + + YK+L
Sbjct: 142 NPFTTNSLELPECSNKYHDQELV-FGFGFHEMTKEYKVL 179
Score = 56 (24.8 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 18/48 (37%), Positives = 25/48 (52%)
Query: 384 LWKEVDRMPNIWCLDFYGKHVRMTCLGNKGLLMLSLRSRQMNRLVTYN 431
L + +DR IW GK VR+ CL G ++L +SR LV Y+
Sbjct: 336 LKQNLDRPMWIWKNAENGKVVRVLCLLENGEILLEYKSRV---LVAYD 380
>TAIR|locus:2083455 [details] [associations]
symbol:AT3G20710 "AT3G20710" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007131 "reciprocal meiotic recombination" evidence=RCA]
[GO:0009827 "plant-type cell wall modification" evidence=RCA]
[GO:0009860 "pollen tube growth" evidence=RCA] [GO:0031048
"chromatin silencing by small RNA" evidence=RCA] [GO:0033044
"regulation of chromosome organization" evidence=RCA] [GO:0042138
"meiotic DNA double-strand break formation" evidence=RCA]
[GO:0045132 "meiotic chromosome segregation" evidence=RCA]
InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181 SMART:SM00256
EMBL:CP002686 GenomeReviews:BA000014_GR SUPFAM:SSF81383
EMBL:AP002034 InterPro:IPR006527 InterPro:IPR017451 Pfam:PF07734
TIGRFAMs:TIGR01640 HOGENOM:HOG000112505 IPI:IPI00531163
RefSeq:NP_188707.1 UniGene:At.65111 ProteinModelPortal:Q9LHQ0
SMR:Q9LHQ0 EnsemblPlants:AT3G20710.1 GeneID:821619
KEGG:ath:AT3G20710 TAIR:At3g20710 eggNOG:NOG276434
InParanoid:Q9LHQ0 OMA:IAGENGY PhylomeDB:Q9LHQ0
Genevestigator:Q9LHQ0 Uniprot:Q9LHQ0
Length = 362
Score = 127 (49.8 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 74/302 (24%), Positives = 119/302 (39%)
Query: 123 PEDLYEAVIARLPIATFFRFRSVCQKWNSLLKSHSFSQHCAQ--VPQGIPWFYTITHENV 180
P+DL E +++R+P RS C+ W L K+ SF+ G F IT NV
Sbjct: 7 PKDLVEEILSRVPFKYLRAIRSTCKNWYDLSKNRSFANKNIDKAAVSGEKEFLMITQFNV 66
Query: 181 ---------NSGAMYDPSLKKWHHPTISSLPTKMIILP---VASAGGLVCFLDIGHRNFY 228
+ +D S++ I S K + V G+ FL + +
Sbjct: 67 FWVGVNLHRSQNNSFDLSIQL--KAKIVSRDKKDDLFQKSQVIHCNGV--FLCVREKMLV 122
Query: 229 VCNPLT-QSFKELPARSVKVWSRVAVGMTLNGNSTSSGYKILWV-GCD-GEYEIYDSLRN 285
V NP Q+ + +P + R A+G + +S +KIL + G + IYD +
Sbjct: 123 VLNPYWGQTKRIMPRPPFGCFDRYALGY----DKSSGSHKILRLFGVNQNNLNIYDLSSS 178
Query: 286 SWTRPGSMPSNIKLPVSLNFRSQAVSVDGILYFMRSDPEGIVSYNMVTGVWKQ-FIIPTP 344
SW P L + + Q VS++G Y+ D E I Y + ++ F P P
Sbjct: 179 SWMIPDGT-----LERDMEYMKQGVSLNGDTYWYAKDKESIDWYLLCFDFTRERFGTPLP 233
Query: 345 LHLNDHTLAECGGRIMLVGLLTKNAATCV----CIWELQKM---TLLWK---EVDRMPNI 394
L ++ G L L + A + IW K+ + W ++D P+I
Sbjct: 234 LPFSNEGYTLHKGYKSLSALKEEKLAVLLWDTMVIWVTNKIEPDAVSWSIFLKLDMEPSI 293
Query: 395 WC 396
+C
Sbjct: 294 YC 295
>TAIR|locus:4515102531 [details] [associations]
symbol:AT1G14315 "AT1G14315" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001810
Pfam:PF00646 PROSITE:PS50181 SMART:SM00256 EMBL:CP002684
SUPFAM:SSF81383 InterPro:IPR006527 InterPro:IPR017451 Pfam:PF07734
TIGRFAMs:TIGR01640 IPI:IPI01020460 RefSeq:NP_001154336.1
UniGene:At.41977 UniGene:At.69279 ProteinModelPortal:F4HUI9
SMR:F4HUI9 EnsemblPlants:AT1G14315.2 GeneID:6241224
KEGG:ath:AT1G14315 Uniprot:F4HUI9
Length = 303
Score = 125 (49.1 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 47/167 (28%), Positives = 72/167 (43%)
Query: 123 PEDLYEAVIARLPIATFFRFRSVCQKWNSLLKSHSFSQHCAQVPQGIPWFYTITHENVNS 182
P D E ++ R+P+ + RF+S C++W ++S F Q Q I + +++N
Sbjct: 5 PHDTVEDILERVPVKSLLRFKSACKQWKLTIESQYF-----QAKQLI---CSAGGKDLNL 56
Query: 183 GAMYD-PS-LKKWHHPTISSLPTKMIILPVAS------------AGGLVCFLDIGHRNFY 228
+ + PS L HH T S P K +L ++S GLVC D N
Sbjct: 57 VLVSEVPSTLVLPHHVTADSPPLKTNVLLISSERYHIYQLFHNSCDGLVCLFDYQTLNNI 116
Query: 229 VCNPLTQSFKELPARSVKVWSRVAVGMTLNGNSTSSGYKILWVGCDG 275
V NP T+ + P S W + N++SS L+V DG
Sbjct: 117 VYNPATRWHRRFPVSSTNTWRYINPSSPYRINTSSSRGHALYV--DG 161
>TAIR|locus:2006902 [details] [associations]
symbol:AT1G33530 "AT1G33530" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181
SMART:SM00256 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF81383 EMBL:AC051630 InterPro:IPR017451 TIGRFAMs:TIGR01640
IPI:IPI00520348 PIR:B86459 RefSeq:NP_174618.1 UniGene:At.51905
ProteinModelPortal:Q9C800 SMR:Q9C800 EnsemblPlants:AT1G33530.1
GeneID:840247 KEGG:ath:AT1G33530 TAIR:At1g33530 eggNOG:NOG247401
HOGENOM:HOG000112523 OMA:HTEKFRT PhylomeDB:Q9C800
ProtClustDB:CLSN2914614 Genevestigator:Q9C800 Uniprot:Q9C800
Length = 441
Score = 127 (49.8 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 65/284 (22%), Positives = 117/284 (41%)
Query: 76 GKSGSCKM--LEPVXXXXXXXXXXERNRGKLAGSTSTAEAMEQEIWKEFPEDLYEAVIAR 133
GKS C L V + R K S + E + E P+ L E ++ R
Sbjct: 49 GKSPRCSKATLAVVVHPTASTTHDDFLRKKQERSGKSPSCSETTLAVELPDVLVEEILQR 108
Query: 134 LPIATFFRFRSVCQKWNSLLKS-HSFSQHCAQVPQ--GIPWFYTITHENVNSGAMYDPSL 190
LP+ R +S+ + W SL++S H +H + + G+ + +
Sbjct: 109 LPVKYLVRLKSISKGWKSLIESDHLAEKHLRLLEKKYGLKEIKITVERSTSKSICIKFFS 168
Query: 191 KKWHHPTISSLPTKMIILPVASAGGLVCFLDIGHRNFYVCNPLTQSFKEL-PARSVKVWS 249
++ I+S ++ +P S GLVC ++ Y+ NP+T + L P R K+
Sbjct: 169 RRSGMNAINSDSDDLLRVP-GSCNGLVCVYELDSVYIYLLNPMTGVTRTLTPPRGTKL-- 225
Query: 250 RVAVGMTLNGNSTSSGYKILWV-GCD--GEYEIYDSLRNSWTR----PGSMPSNIKLPVS 302
+VG ++ + YK++ + G D G ++D N W + G MP + +P
Sbjct: 226 --SVGFGID--VVTGTYKVMVLYGFDRVGTV-VFDLDTNKWRQRYKTAGPMPLSC-IPTP 279
Query: 303 LNFRSQAVSVDGILYFM-RSDPEGIVSYNMVTGVWKQFIIPTPL 345
V V+G L+++ SD I+ ++ T ++ P +
Sbjct: 280 ---ERNPVFVNGSLFWLLASDFSEILVMDLHTEKFRTLSQPNDM 320
>TAIR|locus:2090482 [details] [associations]
symbol:AT3G17570 "AT3G17570" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181
SMART:SM00256 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF81383 EMBL:AB022219 InterPro:IPR006527 InterPro:IPR017451
Pfam:PF07734 TIGRFAMs:TIGR01640 HOGENOM:HOG000112505
IPI:IPI00546634 RefSeq:NP_188384.1 UniGene:At.53357
ProteinModelPortal:Q9LUP1 SMR:Q9LUP1 EnsemblPlants:AT3G17570.1
GeneID:821023 KEGG:ath:AT3G17570 TAIR:At3g17570 eggNOG:NOG285994
InParanoid:Q9LUP1 OMA:YIVGEDI PhylomeDB:Q9LUP1
ProtClustDB:CLSN2913487 Genevestigator:Q9LUP1 Uniprot:Q9LUP1
Length = 381
Score = 126 (49.4 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 55/221 (24%), Positives = 97/221 (43%)
Query: 118 IWKEFPEDLYEAVIARLPIATFFRFRSVCQKWNSLLKSHSF-SQHCAQVPQGIPWFYTIT 176
++ + P DL +++R+P + + + C++W +L K F +H + + + ++
Sbjct: 1 MFTDLPRDLETEILSRVPATSLQKLKPTCKRWYTLFKDPEFLKKHVGRAEREVISLMSLR 60
Query: 177 --HENVN-SGAMYDPSLKKWHHPTISSLPTKMIILPVASAGGLV-CFLDIGHRNFYVCNP 232
+VN SG + + S K I + GL+ C D V NP
Sbjct: 61 VYSLSVNLSGIHSSVEMTGMLNSLKDSEDVK--ISDITECNGLLLCTTD--DSRLVVWNP 116
Query: 233 LTQSFKELPARS---VKVWSRVAVGMTLNGNSTSSGYKIL--WVGC-D-G-EYEIYDSLR 284
T + +P +S +++ + +G N N + YKIL + G D G E+EIY+
Sbjct: 117 YTGETRWIPYKSNSPYEMYQKFVLGYD-NTNKSRYSYKILRCYHGLIDFGYEFEIYEFNS 175
Query: 285 NSWTRPGSMPSNIKLPVSLNFRSQAVSVDGILYFMRSDPEG 325
+SW R N +F S+ V++ G Y+ SD EG
Sbjct: 176 HSWRRFYDNSPNC------SFESKGVTLKGNTYWFASDTEG 210
>TAIR|locus:2091491 [details] [associations]
symbol:AT3G13680 "AT3G13680" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181
SMART:SM00256 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF81383 EMBL:AP001307 InterPro:IPR006527 InterPro:IPR017451
Pfam:PF07734 TIGRFAMs:TIGR01640 HOGENOM:HOG000112505
IPI:IPI00531006 RefSeq:NP_187980.1 UniGene:At.39370
ProteinModelPortal:Q9LID1 SMR:Q9LID1 EnsemblPlants:AT3G13680.1
GeneID:820576 KEGG:ath:AT3G13680 TAIR:At3g13680 eggNOG:NOG321320
InParanoid:Q9LID1 OMA:ETIEICV PhylomeDB:Q9LID1
ProtClustDB:CLSN2915513 Genevestigator:Q9LID1 Uniprot:Q9LID1
Length = 395
Score = 126 (49.4 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 58/228 (25%), Positives = 94/228 (41%)
Query: 121 EFPEDLYEAVIARLPIATFFRFRSVCQKWNSLLKSHSFSQHCAQVPQGIPWF-------- 172
+ P DL E +++R+P+ + RS CQKWNSL KS + F
Sbjct: 6 DLPGDLVEEILSRVPLTSLRAIRSTCQKWNSLSKSQICGRKATAAENKFLGFMMKDSRVC 65
Query: 173 ---YTITHENVNSGAMYDPSLKKWHHPTISSLPTKMIILPVASAGGLVCFLDIGHRNFYV 229
+ + + G + +PS+K+ +S L ++ + V GLV + + V
Sbjct: 66 SMKFDLQGIRNDDGELVEPSIKQ-----VSKLD-QIEVSQVFHCDGLVLCIIKDNTGLLV 119
Query: 230 CNP-LTQSFKELPARSVKVWSRVAVGMTLNGNSTSSGYKILWVGCDGE--YEIYDSLRNS 286
NP L Q+ P + ++ R A+G N N L+ + YE+YD NS
Sbjct: 120 WNPYLGQTRWIHPRNNYQIEDRYALGYDNNRNHKILRIFDLYPSSNRVFGYEVYDFSSNS 179
Query: 287 WTRPGSMPSNIKLPVSLNFRSQAVSVDGILYFMRSDPE---GIVSYNM 331
W +P + + +FR S+ G YF E GI + N+
Sbjct: 180 WKVLDVIP---EWDIQSHFRG--ASLKGNAYFPAQKKETVGGIKTINI 222
>TAIR|locus:2090507 [details] [associations]
symbol:AT3G17490 "AT3G17490" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181
SMART:SM00256 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF81383 EMBL:AB022219 InterPro:IPR006527 InterPro:IPR017451
Pfam:PF07734 TIGRFAMs:TIGR01640 HOGENOM:HOG000112505
IPI:IPI00533780 RefSeq:NP_188376.1 UniGene:At.53353
ProteinModelPortal:Q9LUP8 SMR:Q9LUP8 PaxDb:Q9LUP8 PRIDE:Q9LUP8
EnsemblPlants:AT3G17490.1 GeneID:821014 KEGG:ath:AT3G17490
TAIR:At3g17490 eggNOG:NOG303855 InParanoid:Q9LUP8 PhylomeDB:Q9LUP8
Genevestigator:Q9LUP8 Uniprot:Q9LUP8
Length = 388
Score = 124 (48.7 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 60/247 (24%), Positives = 110/247 (44%)
Query: 124 EDLYEAVIARLPIATFFRFRSVCQKWNSLLKSHSFSQ-HCAQVPQ---GIPW----FYTI 175
EDL E +++R+P + R R C++WN+L FS+ H + P+ G+ Y++
Sbjct: 8 EDLVEEILSRVPAISLKRLRYTCKQWNALFNDQRFSKKHRDKAPKTYLGLTLKDFRIYSM 67
Query: 176 THENVNSGAMYDPS--LKKWHHPTISSLP--TKMIILPVASAGGLVCFLDIGHRNFYVCN 231
+ N++ G +++ + L +SSL I + GL+ + V N
Sbjct: 68 S-SNLH-GLLHNNNIDLLMEFKGKLSSLNDLNDFEISQIYPCDGLILCSTKRNTRLVVWN 125
Query: 232 PLTQSFKELPARSVKVWSRVAVGMTLNGNSTSSGYKILWV-----GCDGEYEIYDSLRNS 286
P T + + R+ ++ A G + +S + YKIL V G EYEI++ NS
Sbjct: 126 PCTGQTRWIKRRNRRMCDTFAFGYDNSKSSCLNNYKILRVCEKIKGQQFEYEIFEFSSNS 185
Query: 287 WTRPGSMPSNIKLPVSLNFRSQAVSVDGILYFMRSDPEG---IVSYNMVTGVWKQFIIPT 343
W P+ I ++VSV G Y+ + + I ++ + +++ +P
Sbjct: 186 WRVLDVNPNCI-------IEGRSVSVKGNSYWFATITKTHYFIRRFDFSSETFQK--LPL 236
Query: 344 PLHLNDH 350
P H+ D+
Sbjct: 237 PFHIFDY 243
>TAIR|locus:2086243 [details] [associations]
symbol:AT3G23260 "AT3G23260" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181
SMART:SM00256 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF81383 EMBL:AB025608 InterPro:IPR006527 InterPro:IPR017451
Pfam:PF07734 TIGRFAMs:TIGR01640 HOGENOM:HOG000112505 EMBL:BT029484
IPI:IPI00520640 RefSeq:NP_188967.1 UniGene:At.53451
UniGene:At.75621 ProteinModelPortal:Q9LTC3 SMR:Q9LTC3 PRIDE:Q9LTC3
DNASU:821905 EnsemblPlants:AT3G23260.1 GeneID:821905
KEGG:ath:AT3G23260 TAIR:At3g23260 eggNOG:NOG326429
InParanoid:Q9LTC3 OMA:MEWRSLP PhylomeDB:Q9LTC3
ProtClustDB:CLSN2914713 ArrayExpress:Q9LTC3 Genevestigator:Q9LTC3
Uniprot:Q9LTC3
Length = 362
Score = 123 (48.4 bits), Expect = 0.00011, P = 0.00011
Identities = 60/246 (24%), Positives = 103/246 (41%)
Query: 119 WKEFPEDLYEAVIARLPIATFFRFRSVCQKWNSLLKSHSFSQ-HCAQVPQGIPWFYTITH 177
W+ P +L E +++R+P R RS ++WN+L K+ SF++ H A + P +
Sbjct: 3 WRSLPVELQEEILSRVPAKYLARLRSTSKQWNALSKTGSFAKKHSANATKE-PLIIMLKD 61
Query: 178 ENVNSGAMYDPSLKKWHHPTISS--LPTKMIIL-P----VASAGGLVCFLDIGHRNFYVC 230
V ++ +L H+ S L +++ + P V GL+ I V
Sbjct: 62 SRVYLASV---NLHGVHNNVAQSFELGSRLYLKDPHISNVFHCDGLLLLCSIKENTLEVW 118
Query: 231 NPLTQSFKELPARSVKVWSRVAVGMTLNGNSTSSGYKIL----WVGCDG----EYEIYDS 282
NP + K + R + + S+ YK+L V G EYEIYD
Sbjct: 119 NPCSGEAKLIKPRHSYYKESDFYALGYDNKSSCKKYKVLRVISQVHVQGDFKIEYEIYDF 178
Query: 283 LRNSWTRPGSMPSNIKLPVSLNFRSQAVSVDGILYFM---RSDP-EGIVSYNMVTGVWKQ 338
+SW G+ +S+ + VSV G Y++ R P + +S++ T ++
Sbjct: 179 TNDSWRVHGATTE-----LSIR-QKHPVSVKGSTYWVVRNRYFPYKYFLSFDFSTERFQS 232
Query: 339 FIIPTP 344
+P P
Sbjct: 233 LSLPQP 238
>TAIR|locus:2092985 [details] [associations]
symbol:AT3G21120 "AT3G21120" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181
SMART:SM00256 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF81383 EMBL:AP000604 InterPro:IPR006527 InterPro:IPR017451
Pfam:PF07734 TIGRFAMs:TIGR01640 HOGENOM:HOG000112505
IPI:IPI00520197 RefSeq:NP_188749.1 UniGene:At.53414
ProteinModelPortal:Q9LJC0 SMR:Q9LJC0 EnsemblPlants:AT3G21120.1
GeneID:821664 KEGG:ath:AT3G21120 TAIR:At3g21120 eggNOG:NOG273532
InParanoid:Q9LJC0 OMA:WARDINR PhylomeDB:Q9LJC0
ProtClustDB:CLSN2684311 Genevestigator:Q9LJC0 Uniprot:Q9LJC0
Length = 367
Score = 123 (48.4 bits), Expect = 0.00011, P = 0.00011
Identities = 61/221 (27%), Positives = 99/221 (44%)
Query: 123 PEDLYEAVIARLPIATFFRFRSVCQKWNSLLKSHSFSQ-HCAQVPQGIPWF--------Y 173
PEDL +++++P + RFRS C++WN+L+ SF++ H A P+ P Y
Sbjct: 4 PEDLVLEILSKVPAVSLARFRSTCRRWNALVVDGSFAKKHYAYGPRQYPIVIMLIEFRVY 63
Query: 174 TITHE----NVNSGAMYDPSLKKWHH----PTISSLPTKMIILPVASAGGLV--CFLDIG 223
++ + N N+GA PS K +S+ ++ I GL+ C D
Sbjct: 64 LVSIDLHGINNNNGA---PSAKLTGQFSLKDPLSNSSEEVDIRNAFHCDGLLLCCTKD-- 118
Query: 224 HRNFYVCNPLTQSFKEL-PARSVKVWSRVAVGMTLNGNSTSSGYKILWVGCDG-----EY 277
R V NP + K + P S K A+G ++ SS YKIL + G E
Sbjct: 119 -RRLVVWNPCSGETKWIQPRNSYKESDLYALGY----DNRSSSYKILRMHPVGNPFHIES 173
Query: 278 EIYDSLRNSWTRPGSMPSNIKLPVSLNFRSQAVSVDGILYF 318
E+YD +SW G + ++ + + S ++V G Y+
Sbjct: 174 EVYDFASHSWRSVG-VTTDFHIQTN---ESYGMNVKGTTYW 210
>TAIR|locus:2124665 [details] [associations]
symbol:AT4G10190 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] InterPro:IPR001810
Pfam:PF00646 PROSITE:PS50181 SMART:SM00256 EMBL:CP002687
GenomeReviews:CT486007_GR SUPFAM:SSF81383 EMBL:AF096373
EMBL:AL049487 EMBL:AL161516 InterPro:IPR006527 InterPro:IPR017451
Pfam:PF07734 TIGRFAMs:TIGR01640 HOGENOM:HOG000112505
IPI:IPI00545817 PIR:T01978 RefSeq:NP_192757.2 UniGene:At.54250
ProteinModelPortal:O82622 SMR:O82622 EnsemblPlants:AT4G10190.1
GeneID:826610 KEGG:ath:AT4G10190 TAIR:At4g10190 eggNOG:NOG283271
InParanoid:O82622 OMA:HIDVWIA Genevestigator:O82622 Uniprot:O82622
Length = 367
Score = 123 (48.4 bits), Expect = 0.00011, P = 0.00011
Identities = 61/255 (23%), Positives = 119/255 (46%)
Query: 121 EFPEDLYEAVIARLPIATFFRFRSVCQKWNSLLKSHSFS-QHCAQVPQG-----IPWF-- 172
+ PEDL ++AR+P T R +S ++WN L++ F+ QH P+ + F
Sbjct: 8 DLPEDLVMEILARVPTVTLVRLQSTSKRWNVLIEDKRFAEQHFTNAPRHSLLIMLMTFRV 67
Query: 173 YTITHE--NVNSGAMYDPSLKKWHHPTISSLPTKMIILPVASAGGLVCFLDIGHRNFYVC 230
Y ++ + +++ + S + P +S+ ++ I V G + + +R V
Sbjct: 68 YLVSVDLHTIHNNKVNIISQLRLKDP-LSNFLEEVDICNVFHCDGFLLCTTVDNR-LVVS 125
Query: 231 NPLTQSFKELPARSVKVWSRVAVGMTLNGNSTSSGYKILWVGC---DG----EYEIYDSL 283
NP ++ K + R+ + + + L G S+ + YKI+ + D YEIYD
Sbjct: 126 NPCSRDTKWIQPRNF--YKKFDI-FAL-GKSSCNKYKIMRMDQFYPDRPEFMNYEIYDFN 181
Query: 284 RNSWTRPGSMPSNIKLPVSLNFRSQAVSVDGILYFMRSDPEGIVSYNMVTGV---WKQFI 340
NSW G + ++ +P ++ + +SV+G Y++ S + + S + + G ++F+
Sbjct: 182 SNSWRVVGKI-TDWFIPRCMD---RGMSVNGNTYWLASTNKDLTSSSFLLGFDFSTERFV 237
Query: 341 -IPTPL-HLNDHTLA 353
+ P HL+D A
Sbjct: 238 RVSLPGDHLSDPVFA 252
>TAIR|locus:2157378 [details] [associations]
symbol:AT5G51000 "AT5G51000" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181
SMART:SM00256 EMBL:CP002688 GenomeReviews:BA000015_GR
SUPFAM:SSF81383 EMBL:AB017063 InterPro:IPR006527 InterPro:IPR017451
Pfam:PF07734 TIGRFAMs:TIGR01640 HOGENOM:HOG000112505
IPI:IPI00530176 RefSeq:NP_199913.1 UniGene:At.65665
ProteinModelPortal:Q9FI48 SMR:Q9FI48 EnsemblPlants:AT5G51000.1
GeneID:835173 KEGG:ath:AT5G51000 TAIR:At5g51000 eggNOG:NOG322020
InParanoid:Q9FI48 OMA:HRPAGRF PhylomeDB:Q9FI48
ProtClustDB:CLSN2916704 Genevestigator:Q9FI48 Uniprot:Q9FI48
Length = 378
Score = 122 (48.0 bits), Expect = 0.00015, P = 0.00015
Identities = 74/294 (25%), Positives = 121/294 (41%)
Query: 122 FPEDLYEAVIARLPIATFFRFRSVCQKWNSLLKSHSFSQ-HCAQVPQGIPWFYT------ 174
FP DL E +++R+PI + + C++WN L K SF++ H + + I
Sbjct: 8 FP-DLVEEILSRVPITSLKAVKLTCKQWNDLSKDSSFTKNHYGKEAKEIQVIMICDLKAC 66
Query: 175 ITHENV-NSGAMYDPSLKKWHHPTISSLPTKMIILPVASAGGLVCFLDIGHRN---FYVC 230
+ N+ N + DPS+K+ I L ++ I V GL+ L ++ V
Sbjct: 67 LMSVNLHNHKDLADPSIKQ-----IGKL-NQVEIDSVFHCDGLLLLLLCNPKDNSKLMVW 120
Query: 231 NPLTQSFKELPARSVKVWSRVA-------VGMTLNGNSTSSGYKILWVGCD-GEYEIYDS 282
NP + + R+ R A G G +++ +KILW EYEIYD
Sbjct: 121 NPYLGQTRWIQPRNNSHKHRPAGRFNHRPAGRFYMGYDSNNNHKILWFSSMYREYEIYDF 180
Query: 283 LRNSWTRPGSMPSNIKLPVSLNFRSQAVSVDGILYFMRSD---PEG-IVSYNMVTGVWKQ 338
++WT ++ +Q VS+ G +YF+ D E ++S++ +
Sbjct: 181 KSDAWT-----VIDVNTDQDHIIDNQRVSLKGNVYFIAHDILKEEAFLLSFDFTCERFGP 235
Query: 339 FIIPTPLHL--NDHTLAECGGRIMLVGLLTKNAATCVCIWELQKMTL---LWKE 387
+ P P H D L L L K+ A + IW K+ L LW +
Sbjct: 236 SL-PLPFHCCHEDTVLLSTVREEQLAVLFQKSDAYEMGIWITTKIELNIVLWSK 288
>TAIR|locus:2100524 [details] [associations]
symbol:AT3G52320 "AT3G52320" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] InterPro:IPR001810 Pfam:PF00646
PROSITE:PS50181 SMART:SM00256 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF81383 EMBL:AL132972
InterPro:IPR017451 TIGRFAMs:TIGR01640 InterPro:IPR013187
Pfam:PF08268 HOGENOM:HOG000112509 IPI:IPI00532100 PIR:T46102
RefSeq:NP_190800.1 UniGene:At.65274 ProteinModelPortal:Q9FT50
SMR:Q9FT50 EnsemblPlants:AT3G52320.1 GeneID:824397
KEGG:ath:AT3G52320 TAIR:At3g52320 eggNOG:NOG319180
InParanoid:Q9FT50 OMA:CVLEDAD PhylomeDB:Q9FT50
ProtClustDB:CLSN2915488 Genevestigator:Q9FT50 Uniprot:Q9FT50
Length = 390
Score = 120 (47.3 bits), Expect = 0.00027, P = 0.00027
Identities = 42/140 (30%), Positives = 64/140 (45%)
Query: 121 EFPEDLYEAVIARLPIATFFRFRSVCQKWNSLLKSHSFSQHCAQVPQGIPWF-YTITHEN 179
E PE++ ++ RLP + RF+ V + W SL+ S F+ + F Y + EN
Sbjct: 26 EIPEEMLIDILIRLPAKSLMRFKCVSKLWLSLITSRYFTNRFFKPSSPSCLFAYLVDREN 85
Query: 180 VNSGAMYDPSLKKWH-HPTIS-SLPTKMIILPVA------SAGGLVCFLDIGHRNFYVCN 231
+ + S H H S S+ + +P+ +A GL+C+ G R VCN
Sbjct: 86 QSKYLLLQSSSSSRHDHSDTSVSVIDQHSTIPIMGGYLVNAARGLLCYRT-GRR-VKVCN 143
Query: 232 PLTQSFKELPA-RS-VKVWS 249
P T+ ELP RS VW+
Sbjct: 144 PSTRQIVELPIMRSKTNVWN 163
>TAIR|locus:2075790 [details] [associations]
symbol:AT3G10430 "AT3G10430" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181
SMART:SM00256 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF81383 EMBL:AC011560 EMBL:AC013428 InterPro:IPR006527
InterPro:IPR017451 Pfam:PF07734 TIGRFAMs:TIGR01640
HOGENOM:HOG000112505 ProtClustDB:CLSN2683005 IPI:IPI00538286
RefSeq:NP_187654.1 UniGene:At.65075 ProteinModelPortal:Q9CAE7
SMR:Q9CAE7 EnsemblPlants:AT3G10430.1 GeneID:820207
KEGG:ath:AT3G10430 TAIR:At3g10430 InParanoid:Q9CAE7
PhylomeDB:Q9CAE7 Genevestigator:Q9CAE7 Uniprot:Q9CAE7
Length = 370
Score = 119 (46.9 bits), Expect = 0.00032, P = 0.00032
Identities = 64/265 (24%), Positives = 114/265 (43%)
Query: 123 PEDLYEAVIARLPIATFFRFRSVCQKWNSLLKSHSFSQHCAQVPQGIPWFYTITHENVNS 182
P DL ++ R P + RF+S C+KW L+ + + + + F I EN
Sbjct: 6 PFDLILEILQRTPAESLLRFKSTCKKWYELISNDKRFMY-KHLDKSTKRFLRI--ENRER 62
Query: 183 GAMYDPSLKKWHHPTISSLPTKMI--ILPVASAGGLV---CFLDIGHR-NFYVCNPLTQS 236
+ DP + +S++P ++ + GL+ C+ ++G N V NP+ +
Sbjct: 63 VQILDPVTEIL---AVSTIPNELRHKYFTLIHCDGLMLGMCYEELGSDPNLAVWNPVMRK 119
Query: 237 FKEL-PARS-VKVWSRVAVGMTLNGNSTSSGYKIL---WVGCDGEYEIYDSLRNSWTRPG 291
K + P+ V W +G + + YKIL ++G D + E Y + G
Sbjct: 120 IKWIKPSPPLVCYWGSDYLGFGYD-KTFRDNYKILRFTYLGDDDDDESYPKCQIYEFNSG 178
Query: 292 SMPS-NIKLPVSLNFRSQAVSVDGILYF--MRSDPEGIVSYNMVTGVWKQFIIPTPLHLN 348
S S K ++ VSV+G +Y+ ++ I+S++ + + I +PL+ +
Sbjct: 179 SWRSIEAKFDGEIDVEVDGVSVNGSMYWIELQEKKNFILSFDFSKETFNR-ICDSPLYWD 237
Query: 349 DHTLAEC--GGRIMLVGLLTKNAAT 371
L C G R+ LL +N AT
Sbjct: 238 IKRLG-CFNGDRL---SLLQQNEAT 258
>TAIR|locus:2018017 [details] [associations]
symbol:AT1G62270 "AT1G62270" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181
SMART:SM00256 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF81383 EMBL:AC000375 InterPro:IPR006527 InterPro:IPR017451
Pfam:PF07734 TIGRFAMs:TIGR01640 HOGENOM:HOG000112505
IPI:IPI00522996 PIR:C96649 RefSeq:NP_176417.1 UniGene:At.66078
ProteinModelPortal:O04591 SMR:O04591 EnsemblPlants:AT1G62270.1
GeneID:842524 KEGG:ath:AT1G62270 TAIR:At1g62270 InParanoid:O04591
PhylomeDB:O04591 ProtClustDB:CLSN2682088 Genevestigator:O04591
Uniprot:O04591
Length = 383
Score = 118 (46.6 bits), Expect = 0.00044, P = 0.00044
Identities = 58/221 (26%), Positives = 100/221 (45%)
Query: 119 WKEFPEDLYEAVIARLPIATFFRFRSVCQKWNSLLKSHSFSQ-HCAQVPQG----IPWFY 173
+ P DL E ++AR+P + R RS C++WN L F++ H + + I Y
Sbjct: 9 FSSLPWDLVEDILARVPATSLKRLRSTCKQWNFLFNDQIFTKMHFDKAEKQFLVLILRLY 68
Query: 174 TITHENVNSGAMYD---PSLK-KWH----HPTISSLPTKMIILPVASAGGLV-CFLDIGH 224
T+ +++ ++D PS++ K P SS K + V GL+ C G
Sbjct: 69 TVCSMSLDLRGLHDNIDPSIEVKGELSLIDPHCSS--RKTFVSKVFHCNGLLLCTTMTGL 126
Query: 225 RNFYVCNPLTQSFK-ELPARSVKVWSRVAVGMTLNGNSTSS-GYKIL-WVGCDG-EYEIY 280
+ C T+ K E+P + A+G GN S YKI+ ++ + + EIY
Sbjct: 127 VVWNPCTDQTRWIKTEVPHNRN---DKYALGY---GNYKSCYNYKIMKFLDLESFDLEIY 180
Query: 281 DSLRNSWTRPGSMPSNIKLPVSLNFRSQAVSVDGILYFMRS 321
+ NSW G++ + +P+ ++ VS+ G Y++ S
Sbjct: 181 EVNSNSWRVLGTVTPDFTIPLD----AEGVSLRGNSYWIAS 217
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.136 0.449 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 468 444 0.00090 118 3 11 22 0.49 33
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 32
No. of states in DFA: 628 (67 KB)
Total size of DFA: 343 KB (2169 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 36.54u 0.09s 36.63t Elapsed: 00:00:01
Total cpu time: 36.55u 0.09s 36.64t Elapsed: 00:00:01
Start: Thu May 9 22:15:30 2013 End: Thu May 9 22:15:31 2013