Query 012233
Match_columns 468
No_of_seqs 357 out of 2509
Neff 9.0
Searched_HMMs 46136
Date Fri Mar 29 00:27:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012233.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012233hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0658 Glycogen synthase kina 100.0 2.3E-73 4.9E-78 533.4 23.3 347 120-468 7-353 (364)
2 PTZ00036 glycogen synthase kin 100.0 4.7E-57 1E-61 463.0 33.2 329 137-466 66-398 (440)
3 KOG0593 Predicted protein kina 100.0 1.1E-57 2.4E-62 415.8 18.5 282 137-428 2-292 (396)
4 KOG0615 Serine/threonine prote 100.0 2.3E-58 4.9E-63 436.2 14.4 260 137-431 172-448 (475)
5 KOG0661 MAPK related serine/th 100.0 1E-57 2.2E-62 438.7 16.3 283 136-428 9-299 (538)
6 KOG0575 Polo-like serine/threo 100.0 2.2E-55 4.7E-60 435.5 24.9 263 137-439 18-292 (592)
7 KOG0659 Cdk activating kinase 100.0 2.1E-55 4.5E-60 394.6 22.3 278 138-429 3-290 (318)
8 KOG0600 Cdc2-related protein k 100.0 5.9E-55 1.3E-59 422.5 21.8 285 131-424 111-404 (560)
9 KOG0663 Protein kinase PITSLRE 100.0 5.9E-55 1.3E-59 402.8 20.4 286 136-429 75-370 (419)
10 KOG0660 Mitogen-activated prot 100.0 1.3E-54 2.8E-59 406.3 20.1 312 138-463 23-346 (359)
11 KOG0581 Mitogen-activated prot 100.0 2.4E-54 5.3E-59 406.1 18.4 259 138-431 80-346 (364)
12 KOG0598 Ribosomal protein S6 k 100.0 7.1E-54 1.5E-58 402.9 20.1 255 134-427 22-288 (357)
13 KOG0592 3-phosphoinositide-dep 100.0 1.3E-53 2.8E-58 416.4 21.2 256 134-430 70-348 (604)
14 KOG0616 cAMP-dependent protein 100.0 1.7E-53 3.6E-58 387.7 18.8 252 134-427 41-304 (355)
15 KOG0605 NDR and related serine 100.0 2.7E-52 5.9E-57 407.4 22.6 272 135-443 139-468 (550)
16 KOG0594 Protein kinase PCTAIRE 100.0 2.2E-51 4.8E-56 385.9 22.9 293 137-433 11-315 (323)
17 KOG0667 Dual-specificity tyros 100.0 5.6E-51 1.2E-55 408.4 24.0 280 138-428 187-510 (586)
18 KOG0595 Serine/threonine-prote 100.0 2.1E-51 4.5E-56 389.5 19.5 256 136-427 9-275 (429)
19 KOG0610 Putative serine/threon 100.0 6.7E-51 1.4E-55 386.1 22.7 276 135-446 75-418 (459)
20 KOG0588 Serine/threonine prote 100.0 2.2E-51 4.8E-56 408.5 20.3 260 138-437 13-280 (786)
21 KOG0583 Serine/threonine prote 100.0 2.2E-50 4.7E-55 400.2 24.5 250 136-425 16-280 (370)
22 KOG0694 Serine/threonine prote 100.0 7.2E-51 1.6E-55 407.7 21.0 254 133-427 364-631 (694)
23 KOG0033 Ca2+/calmodulin-depend 100.0 1E-51 2.2E-56 366.4 9.1 255 135-425 9-272 (355)
24 KOG0591 NIMA (never in mitosis 100.0 9E-52 1.9E-56 373.6 7.4 254 137-428 19-284 (375)
25 KOG0585 Ca2+/calmodulin-depend 100.0 5.4E-50 1.2E-54 385.0 17.8 259 132-426 92-378 (576)
26 cd07871 STKc_PCTAIRE3 Catalyti 100.0 1.4E-48 3E-53 379.1 27.7 277 136-423 4-288 (288)
27 KOG0198 MEKK and related serin 100.0 2E-49 4.3E-54 378.9 18.1 257 138-428 18-284 (313)
28 KOG0580 Serine/threonine prote 100.0 2.3E-49 5.1E-54 350.8 16.0 252 135-426 20-279 (281)
29 KOG0597 Serine-threonine prote 100.0 2.3E-49 5E-54 387.0 17.3 248 137-425 2-256 (808)
30 cd07869 STKc_PFTAIRE1 Catalyti 100.0 1.2E-47 2.5E-52 375.3 27.0 281 137-427 5-295 (303)
31 cd07859 STKc_TDY_MAPK_plant Ca 100.0 1.1E-47 2.4E-52 380.9 26.3 297 138-442 1-311 (338)
32 KOG0578 p21-activated serine/t 100.0 1E-48 2.2E-53 385.1 18.0 250 138-425 274-528 (550)
33 KOG0032 Ca2+/calmodulin-depend 100.0 2.2E-47 4.8E-52 378.6 25.1 257 137-430 35-303 (382)
34 cd07848 STKc_CDKL5 Catalytic d 100.0 5.9E-47 1.3E-51 367.0 27.3 275 138-423 2-287 (287)
35 KOG0582 Ste20-like serine/thre 100.0 2.8E-47 6.1E-52 364.1 23.6 284 131-442 20-316 (516)
36 KOG0599 Phosphorylase kinase g 100.0 3.4E-49 7.3E-54 355.4 9.8 259 138-432 18-295 (411)
37 cd07872 STKc_PCTAIRE2 Catalyti 100.0 8.8E-47 1.9E-51 370.1 27.2 283 137-430 6-296 (309)
38 PTZ00284 protein kinase; Provi 100.0 5.3E-46 1.1E-50 384.9 33.2 282 136-428 128-446 (467)
39 cd07862 STKc_CDK6 Catalytic do 100.0 1.1E-46 2.4E-51 365.7 26.3 279 138-423 2-290 (290)
40 cd07875 STKc_JNK1 Catalytic do 100.0 2.7E-46 5.8E-51 375.2 29.0 296 137-441 24-339 (364)
41 cd07876 STKc_JNK2 Catalytic do 100.0 1.5E-46 3.3E-51 376.2 26.5 286 137-431 21-326 (359)
42 KOG4717 Serine/threonine prote 100.0 1.9E-47 4.2E-52 369.5 18.4 257 138-432 19-282 (864)
43 cd05612 STKc_PRKX_like Catalyt 100.0 1.2E-46 2.6E-51 366.1 22.8 248 138-428 2-262 (291)
44 cd07863 STKc_CDK4 Catalytic do 100.0 6.5E-46 1.4E-50 359.8 27.4 279 138-423 1-288 (288)
45 cd07874 STKc_JNK3 Catalytic do 100.0 4.9E-46 1.1E-50 372.0 27.0 285 136-429 16-320 (355)
46 cd05631 STKc_GRK4 Catalytic do 100.0 2.1E-46 4.5E-51 363.2 23.4 256 139-428 2-269 (285)
47 PTZ00263 protein kinase A cata 100.0 2E-46 4.3E-51 370.9 23.4 249 135-426 16-277 (329)
48 KOG0662 Cyclin-dependent kinas 100.0 8.1E-47 1.8E-51 320.8 17.4 279 138-427 3-290 (292)
49 PHA03212 serine/threonine kina 100.0 1.8E-46 4E-51 378.9 23.2 281 136-432 91-388 (391)
50 cd07873 STKc_PCTAIRE1 Catalyti 100.0 1E-45 2.2E-50 361.1 27.7 288 136-434 5-300 (301)
51 cd07853 STKc_NLK Catalytic dom 100.0 3.1E-46 6.7E-51 375.8 24.5 284 138-427 1-295 (372)
52 cd07878 STKc_p38beta_MAPK11 Ca 100.0 6.3E-46 1.4E-50 369.4 26.3 285 137-431 15-309 (343)
53 cd05571 STKc_PKB Catalytic dom 100.0 2.7E-46 5.8E-51 369.0 21.7 245 143-427 1-258 (323)
54 KOG0192 Tyrosine kinase specif 100.0 5.3E-46 1.1E-50 365.7 23.3 247 138-419 42-298 (362)
55 cd05599 STKc_NDR_like Catalyti 100.0 4.7E-46 1E-50 373.4 22.3 254 138-428 2-304 (364)
56 cd07868 STKc_CDK8 Catalytic do 100.0 3.7E-45 8E-50 359.7 26.5 277 142-423 6-317 (317)
57 cd05628 STKc_NDR1 Catalytic do 100.0 1.3E-45 2.9E-50 370.0 23.2 254 138-428 2-301 (363)
58 PTZ00426 cAMP-dependent protei 100.0 1.2E-45 2.5E-50 366.8 21.9 252 134-427 27-291 (340)
59 KOG0611 Predicted serine/threo 100.0 1.4E-46 3E-51 354.5 14.1 247 137-424 53-307 (668)
60 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 1.5E-45 3.2E-50 365.3 21.9 257 138-428 2-265 (333)
61 cd05629 STKc_NDR_like_fungal C 100.0 1.7E-45 3.6E-50 371.2 21.9 253 138-428 2-313 (377)
62 cd05573 STKc_ROCK_NDR_like Cat 100.0 1.7E-45 3.6E-50 367.3 21.6 257 138-432 2-297 (350)
63 cd07839 STKc_CDK5 Catalytic do 100.0 1.1E-44 2.4E-49 350.5 26.0 276 138-423 1-284 (284)
64 cd05596 STKc_ROCK Catalytic do 100.0 6.6E-45 1.4E-49 365.6 24.4 257 134-426 40-310 (370)
65 cd05595 STKc_PKB_beta Catalyti 100.0 4.6E-45 9.9E-50 360.3 22.8 245 143-427 1-258 (323)
66 cd05590 STKc_nPKC_eta Catalyti 100.0 7.1E-45 1.5E-49 358.4 23.9 245 143-427 1-260 (320)
67 cd05593 STKc_PKB_gamma Catalyt 100.0 4.3E-45 9.2E-50 361.2 22.1 244 143-426 1-257 (328)
68 cd05585 STKc_YPK1_like Catalyt 100.0 4.5E-45 9.8E-50 358.6 21.7 243 145-427 1-254 (312)
69 cd07849 STKc_ERK1_2_like Catal 100.0 2.7E-44 5.8E-49 356.8 27.3 314 137-462 5-330 (336)
70 cd05626 STKc_LATS2 Catalytic d 100.0 4.4E-45 9.5E-50 368.6 21.9 255 138-428 2-313 (381)
71 KOG0690 Serine/threonine prote 100.0 5E-46 1.1E-50 342.1 13.5 254 135-428 166-432 (516)
72 cd07861 STKc_CDK1_euk Catalyti 100.0 2.1E-44 4.5E-49 348.6 25.4 276 138-423 1-285 (285)
73 cd05625 STKc_LATS1 Catalytic d 100.0 3.4E-45 7.4E-50 369.5 20.6 253 138-428 2-313 (382)
74 cd05589 STKc_PKN Catalytic dom 100.0 1.1E-44 2.3E-49 357.8 23.4 248 139-427 1-264 (324)
75 PLN00034 mitogen-activated pro 100.0 4.8E-44 1E-48 357.4 28.3 254 134-426 71-334 (353)
76 cd05601 STKc_CRIK Catalytic do 100.0 5.1E-45 1.1E-49 361.0 20.7 258 138-430 2-273 (330)
77 KOG0604 MAP kinase-activated p 100.0 5.4E-46 1.2E-50 338.7 12.5 260 136-426 60-328 (400)
78 cd05621 STKc_ROCK2 Catalytic d 100.0 8.1E-45 1.8E-49 364.7 22.2 257 135-427 41-311 (370)
79 KOG0666 Cyclin C-dependent kin 100.0 1E-45 2.2E-50 338.4 14.1 298 137-446 24-357 (438)
80 cd07858 STKc_TEY_MAPK_plant Ca 100.0 3.1E-44 6.7E-49 356.5 25.9 313 138-462 6-328 (337)
81 cd07845 STKc_CDK10 Catalytic d 100.0 1.1E-43 2.3E-48 348.2 29.0 285 136-429 6-299 (309)
82 cd05598 STKc_LATS Catalytic do 100.0 6.3E-45 1.4E-49 366.8 20.5 253 138-428 2-309 (376)
83 cd05605 STKc_GRK4_like Catalyt 100.0 2.7E-44 5.8E-49 348.5 24.1 255 139-427 2-268 (285)
84 cd05587 STKc_cPKC Catalytic do 100.0 2.2E-44 4.8E-49 355.5 23.6 250 138-427 1-264 (324)
85 cd05594 STKc_PKB_alpha Catalyt 100.0 6.9E-45 1.5E-49 359.3 19.7 246 143-427 1-259 (325)
86 cd05614 STKc_MSK2_N N-terminal 100.0 1.3E-44 2.8E-49 358.4 21.6 255 138-427 1-274 (332)
87 cd07850 STKc_JNK Catalytic dom 100.0 1.1E-43 2.5E-48 354.6 28.1 311 137-460 16-347 (353)
88 cd07867 STKc_CDC2L6 Catalytic 100.0 7.3E-44 1.6E-48 350.3 26.2 277 142-423 6-317 (317)
89 PHA03209 serine/threonine kina 100.0 4.4E-44 9.4E-49 358.1 25.0 277 137-426 66-357 (357)
90 PHA03207 serine/threonine kina 100.0 8.2E-44 1.8E-48 360.5 27.2 278 137-427 92-382 (392)
91 KOG0589 Serine/threonine prote 100.0 2.4E-45 5.1E-50 359.4 15.3 253 137-425 4-263 (426)
92 cd05591 STKc_nPKC_epsilon Cata 100.0 2.2E-44 4.8E-49 355.1 22.2 244 143-426 1-260 (321)
93 KOG0201 Serine/threonine prote 100.0 3.1E-46 6.8E-51 356.8 8.6 250 138-426 14-269 (467)
94 cd06649 PKc_MEK2 Catalytic dom 100.0 6.4E-44 1.4E-48 353.3 25.2 277 136-427 4-308 (331)
95 cd05588 STKc_aPKC Catalytic do 100.0 2.7E-44 5.8E-49 355.7 22.3 247 143-428 1-270 (329)
96 cd05608 STKc_GRK1 Catalytic do 100.0 4.9E-44 1.1E-48 345.7 23.5 251 145-428 1-265 (280)
97 cd05627 STKc_NDR2 Catalytic do 100.0 2.2E-44 4.7E-49 360.8 21.5 253 138-427 2-300 (360)
98 PHA03211 serine/threonine kina 100.0 1.5E-43 3.2E-48 362.6 28.1 274 137-425 169-460 (461)
99 cd07837 STKc_CdkB_plant Cataly 100.0 1.7E-43 3.8E-48 344.0 27.2 285 138-424 2-295 (295)
100 cd05620 STKc_nPKC_delta Cataly 100.0 4.4E-44 9.5E-49 352.2 23.0 245 143-427 1-255 (316)
101 cd05616 STKc_cPKC_beta Catalyt 100.0 4.2E-44 9.2E-49 353.4 22.3 250 138-427 1-264 (323)
102 KOG0612 Rho-associated, coiled 100.0 2.5E-45 5.5E-50 383.2 14.2 270 136-442 74-360 (1317)
103 cd05584 STKc_p70S6K Catalytic 100.0 5.6E-44 1.2E-48 352.5 23.0 244 143-426 2-262 (323)
104 cd05622 STKc_ROCK1 Catalytic d 100.0 8.3E-44 1.8E-48 357.6 24.5 257 135-427 41-311 (371)
105 cd05592 STKc_nPKC_theta_delta 100.0 6.9E-44 1.5E-48 350.7 23.0 245 143-427 1-255 (316)
106 cd05570 STKc_PKC Catalytic dom 100.0 6.4E-44 1.4E-48 351.3 22.7 245 143-427 1-259 (318)
107 cd05597 STKc_DMPK_like Catalyt 100.0 1.3E-43 2.8E-48 351.1 24.9 258 138-428 2-274 (331)
108 cd07841 STKc_CDK7 Catalytic do 100.0 4.7E-43 1E-47 341.6 28.0 283 138-431 1-293 (298)
109 cd07847 STKc_CDKL1_4 Catalytic 100.0 5.1E-43 1.1E-47 338.8 28.1 276 138-423 2-286 (286)
110 cd07832 STKc_CCRK Catalytic do 100.0 4.5E-43 9.8E-48 339.2 27.1 276 138-424 1-286 (286)
111 cd05619 STKc_nPKC_theta Cataly 100.0 1.1E-43 2.3E-48 349.4 23.0 245 143-427 1-255 (316)
112 cd05575 STKc_SGK Catalytic dom 100.0 5.1E-44 1.1E-48 352.8 20.6 245 143-427 1-258 (323)
113 cd05618 STKc_aPKC_iota Catalyt 100.0 1.1E-43 2.3E-48 351.4 22.1 246 143-427 1-269 (329)
114 KOG0986 G protein-coupled rece 100.0 7.3E-45 1.6E-49 347.6 13.1 263 132-428 180-454 (591)
115 cd07843 STKc_CDC2L1 Catalytic 100.0 3E-43 6.5E-48 342.2 24.3 279 137-423 5-293 (293)
116 cd07860 STKc_CDK2_3 Catalytic 100.0 5.5E-43 1.2E-47 338.6 25.7 275 138-423 1-284 (284)
117 PLN00009 cyclin-dependent kina 100.0 5.7E-43 1.2E-47 340.4 25.8 283 137-428 2-292 (294)
118 cd05615 STKc_cPKC_alpha Cataly 100.0 2.8E-43 6E-48 347.5 23.9 249 139-427 2-264 (323)
119 cd07831 STKc_MOK Catalytic dom 100.0 7.8E-43 1.7E-47 336.9 26.2 275 139-423 1-282 (282)
120 cd05582 STKc_RSK_N N-terminal 100.0 4.5E-44 9.8E-49 352.4 17.8 245 143-427 2-261 (318)
121 KOG0671 LAMMER dual specificit 100.0 1.1E-44 2.3E-49 340.8 12.5 282 136-428 88-414 (415)
122 cd05630 STKc_GRK6 Catalytic do 100.0 3.9E-43 8.4E-48 340.4 23.2 255 139-427 2-268 (285)
123 cd05604 STKc_SGK3 Catalytic do 100.0 1.1E-43 2.3E-48 350.8 19.6 245 143-427 1-258 (325)
124 cd05623 STKc_MRCK_alpha Cataly 100.0 3.3E-43 7.1E-48 348.4 22.8 256 138-427 2-273 (332)
125 cd07855 STKc_ERK5 Catalytic do 100.0 7E-43 1.5E-47 346.3 25.2 302 137-448 5-320 (334)
126 cd05586 STKc_Sck1_like Catalyt 100.0 8.3E-44 1.8E-48 352.3 18.5 245 145-427 1-260 (330)
127 cd07844 STKc_PCTAIRE_like Cata 100.0 1.3E-42 2.9E-47 337.2 26.6 276 137-423 5-291 (291)
128 cd07842 STKc_CDK8_like Catalyt 100.0 9.7E-43 2.1E-47 342.0 25.8 281 138-423 1-316 (316)
129 cd05617 STKc_aPKC_zeta Catalyt 100.0 3.2E-43 7E-48 347.7 22.5 246 143-427 1-267 (327)
130 PTZ00283 serine/threonine prot 100.0 5.1E-43 1.1E-47 363.6 24.7 261 137-428 32-305 (496)
131 cd05602 STKc_SGK1 Catalytic do 100.0 2.3E-43 5E-48 348.4 21.1 244 143-426 1-257 (325)
132 cd05607 STKc_GRK7 Catalytic do 100.0 4.2E-43 9.2E-48 338.6 22.4 251 145-428 1-262 (277)
133 PTZ00266 NIMA-related protein 100.0 9.2E-43 2E-47 374.0 27.1 265 134-429 10-304 (1021)
134 KOG0197 Tyrosine kinases [Sign 100.0 8E-44 1.7E-48 349.8 17.2 243 138-419 207-456 (468)
135 cd05624 STKc_MRCK_beta Catalyt 100.0 4.2E-43 9.1E-48 347.4 22.4 257 138-427 2-273 (331)
136 cd07836 STKc_Pho85 Catalytic d 100.0 1.6E-42 3.4E-47 335.3 25.8 276 138-423 1-284 (284)
137 cd05603 STKc_SGK2 Catalytic do 100.0 2.5E-43 5.5E-48 347.5 20.4 246 143-428 1-259 (321)
138 PTZ00267 NIMA-related protein 100.0 3.9E-43 8.4E-48 364.0 22.6 253 138-426 68-329 (478)
139 cd05632 STKc_GRK5 Catalytic do 100.0 1.2E-42 2.6E-47 336.8 24.6 256 139-428 2-269 (285)
140 KOG1290 Serine/threonine prote 100.0 2.9E-42 6.3E-47 332.6 26.4 290 134-429 75-559 (590)
141 KOG0983 Mitogen-activated prot 100.0 2.4E-43 5.3E-48 317.7 17.6 259 132-425 87-354 (391)
142 KOG0579 Ste20-like serine/thre 100.0 2.2E-44 4.7E-49 355.3 11.8 255 138-427 33-296 (1187)
143 cd06650 PKc_MEK1 Catalytic dom 100.0 8.1E-43 1.8E-47 345.6 23.1 279 137-427 5-306 (333)
144 cd07846 STKc_CDKL2_3 Catalytic 100.0 2.2E-42 4.7E-47 334.6 25.6 276 138-423 2-286 (286)
145 cd07834 STKc_MAPK Catalytic do 100.0 2.5E-42 5.4E-47 341.6 26.2 288 138-432 1-301 (330)
146 cd07870 STKc_PFTAIRE2 Catalyti 100.0 6.3E-42 1.4E-46 332.6 28.4 276 137-423 5-291 (291)
147 PF00069 Pkinase: Protein kina 100.0 7.2E-43 1.6E-47 332.7 20.2 252 139-423 1-260 (260)
148 cd07857 STKc_MPK1 Catalytic do 100.0 5.5E-42 1.2E-46 339.6 27.2 314 138-464 1-331 (332)
149 cd06625 STKc_MEKK3_like Cataly 100.0 2.9E-42 6.2E-47 329.5 24.3 248 138-423 3-263 (263)
150 cd05574 STKc_phototropin_like 100.0 5.5E-42 1.2E-46 337.1 26.6 267 138-440 2-309 (316)
151 KOG0596 Dual specificity; seri 100.0 1.1E-42 2.4E-47 339.9 21.3 258 138-432 362-639 (677)
152 cd07866 STKc_BUR1 Catalytic do 100.0 8.1E-42 1.8E-46 334.5 27.3 281 136-423 7-311 (311)
153 cd07854 STKc_MAPK4_6 Catalytic 100.0 6.4E-42 1.4E-46 340.6 26.8 286 137-429 5-309 (342)
154 KOG0607 MAP kinase-interacting 100.0 5.5E-43 1.2E-47 321.5 17.5 292 138-465 78-405 (463)
155 cd07835 STKc_CDK1_like Catalyt 100.0 9.1E-42 2E-46 329.9 26.4 274 139-423 1-283 (283)
156 cd07833 STKc_CDKL Catalytic do 100.0 1E-41 2.2E-46 330.1 26.5 276 138-423 2-288 (288)
157 cd07865 STKc_CDK9 Catalytic do 100.0 1.3E-41 2.7E-46 333.0 27.2 282 137-423 12-310 (310)
158 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 4.1E-42 8.9E-47 332.9 23.3 260 138-429 2-271 (286)
159 cd06617 PKc_MKK3_6 Catalytic d 100.0 6.7E-42 1.5E-46 330.7 24.0 258 138-429 2-270 (283)
160 cd07852 STKc_MAPK15 Catalytic 100.0 5.4E-42 1.2E-46 340.3 23.6 285 136-431 6-306 (337)
161 cd05118 STKc_CMGC Catalytic do 100.0 1E-41 2.2E-46 329.1 24.1 274 139-423 1-283 (283)
162 cd07879 STKc_p38delta_MAPK13 C 100.0 3.5E-41 7.7E-46 335.2 28.5 283 137-430 15-307 (342)
163 cd07851 STKc_p38 Catalytic dom 100.0 1.8E-41 3.9E-46 337.5 26.2 310 137-462 15-334 (343)
164 cd05580 STKc_PKA Catalytic dom 100.0 1.5E-41 3.3E-46 329.9 24.6 247 138-427 2-261 (290)
165 KOG0669 Cyclin T-dependent kin 100.0 6.3E-44 1.4E-48 318.0 7.1 283 138-425 18-320 (376)
166 KOG4721 Serine/threonine prote 100.0 3.6E-43 7.7E-48 343.5 13.0 241 139-423 126-367 (904)
167 PTZ00024 cyclin-dependent prot 100.0 2E-41 4.3E-46 336.0 25.8 278 138-429 9-322 (335)
168 cd05102 PTKc_VEGFR3 Catalytic 100.0 6.6E-42 1.4E-46 339.8 22.4 250 136-419 6-329 (338)
169 KOG0586 Serine/threonine prote 100.0 2.2E-42 4.8E-47 343.3 18.8 266 134-438 53-324 (596)
170 cd08227 PK_STRAD_alpha Pseudok 100.0 7.8E-42 1.7E-46 337.8 22.7 277 141-427 2-314 (327)
171 KOG0614 cGMP-dependent protein 100.0 1E-43 2.2E-48 343.5 8.9 252 138-428 421-685 (732)
172 cd06619 PKc_MKK5 Catalytic dom 100.0 5.1E-42 1.1E-46 331.3 20.8 254 138-430 2-263 (279)
173 cd07880 STKc_p38gamma_MAPK12 C 100.0 4.7E-41 1E-45 334.4 28.3 311 136-462 14-334 (343)
174 cd07830 STKc_MAK_like Catalyti 100.0 2.9E-41 6.4E-46 326.2 26.0 275 139-423 1-283 (283)
175 KOG1989 ARK protein kinase fam 100.0 3.1E-42 6.7E-47 355.8 20.1 255 138-427 38-322 (738)
176 KOG4236 Serine/threonine prote 100.0 2.1E-43 4.6E-48 342.3 10.6 250 139-425 564-824 (888)
177 cd07840 STKc_CDK9_like Catalyt 100.0 2E-41 4.3E-46 327.6 24.3 277 139-423 1-287 (287)
178 cd06639 STKc_myosinIIIB Cataly 100.0 4E-41 8.6E-46 326.9 26.5 261 136-424 21-291 (291)
179 KOG0193 Serine/threonine prote 100.0 3.3E-42 7.1E-47 340.4 18.5 249 134-419 389-648 (678)
180 KOG4279 Serine/threonine prote 100.0 1.1E-42 2.4E-47 346.4 15.2 258 144-433 582-846 (1226)
181 cd06637 STKc_TNIK Catalytic do 100.0 2.1E-41 4.6E-46 325.3 23.6 257 137-423 6-272 (272)
182 cd07864 STKc_CDK12 Catalytic d 100.0 4.6E-41 1E-45 328.0 26.3 282 136-423 6-302 (302)
183 cd07829 STKc_CDK_like Catalyti 100.0 4.7E-41 1E-45 324.3 26.1 274 139-423 1-282 (282)
184 cd06615 PKc_MEK Catalytic doma 100.0 3.6E-41 7.9E-46 330.2 24.3 279 138-428 2-295 (308)
185 cd08223 STKc_Nek4 Catalytic do 100.0 1E-40 2.2E-45 317.7 26.4 249 138-423 1-257 (257)
186 cd06610 STKc_OSR1_SPAK Catalyt 100.0 4.9E-41 1.1E-45 321.4 24.2 256 138-423 2-267 (267)
187 cd06638 STKc_myosinIIIA Cataly 100.0 7.1E-41 1.5E-45 324.1 25.5 261 135-423 16-286 (286)
188 cd06655 STKc_PAK2 Catalytic do 100.0 5.9E-41 1.3E-45 326.9 24.9 252 138-427 20-276 (296)
189 cd07877 STKc_p38alpha_MAPK14 C 100.0 7E-41 1.5E-45 333.4 25.9 286 137-432 17-312 (345)
190 cd06644 STKc_STK10_LOK Catalyt 100.0 5.4E-41 1.2E-45 326.3 24.5 257 137-428 12-277 (292)
191 cd06630 STKc_MEKK1 Catalytic d 100.0 3.7E-41 8.1E-46 322.7 23.0 253 138-424 1-268 (268)
192 cd06616 PKc_MKK4 Catalytic dom 100.0 1.5E-41 3.2E-46 329.4 20.4 261 138-427 5-274 (288)
193 cd06654 STKc_PAK1 Catalytic do 100.0 4.2E-41 9.1E-46 327.9 23.6 251 138-426 21-276 (296)
194 cd06609 STKc_MST3_like Catalyt 100.0 3.6E-41 7.8E-46 324.3 22.9 252 138-429 2-260 (274)
195 cd08220 STKc_Nek8 Catalytic do 100.0 7.7E-41 1.7E-45 318.1 24.8 249 138-423 1-256 (256)
196 cd08529 STKc_FA2-like Catalyti 100.0 9.1E-41 2E-45 317.7 25.3 249 138-423 1-256 (256)
197 cd06628 STKc_MAPKKK_Byr2_like 100.0 3.7E-41 8E-46 322.7 22.6 246 139-423 2-267 (267)
198 PHA03210 serine/threonine kina 100.0 3.6E-41 7.9E-46 350.7 24.3 283 136-427 147-461 (501)
199 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 1.7E-40 3.6E-45 328.4 27.6 305 136-459 9-322 (328)
200 cd06651 STKc_MEKK3 Catalytic d 100.0 4.8E-41 1E-45 322.1 22.6 249 138-424 3-265 (266)
201 cd06631 STKc_YSK4 Catalytic do 100.0 9.6E-41 2.1E-45 319.6 24.5 248 138-423 1-265 (265)
202 cd07838 STKc_CDK4_6_like Catal 100.0 1.9E-40 4.2E-45 320.8 26.6 278 139-423 1-287 (287)
203 cd06656 STKc_PAK3 Catalytic do 100.0 4.3E-41 9.3E-46 328.0 22.0 256 137-430 19-279 (297)
204 cd06643 STKc_SLK Catalytic dom 100.0 5.3E-41 1.2E-45 324.6 22.5 253 139-426 7-268 (282)
205 cd06608 STKc_myosinIII_like Ca 100.0 1E-40 2.3E-45 320.3 24.0 262 134-423 3-275 (275)
206 cd06632 STKc_MEKK1_plant Catal 100.0 1.2E-40 2.5E-45 317.1 24.1 249 138-423 1-258 (258)
207 KOG0696 Serine/threonine prote 100.0 4.8E-42 1E-46 324.5 14.2 253 135-427 347-613 (683)
208 KOG0603 Ribosomal protein S6 k 100.0 2.8E-41 6E-46 337.2 20.4 245 135-423 320-566 (612)
209 KOG0584 Serine/threonine prote 100.0 3.5E-42 7.7E-47 342.2 13.6 250 140-425 43-301 (632)
210 cd06636 STKc_MAP4K4_6 Catalyti 100.0 8E-41 1.7E-45 323.2 22.7 257 137-423 16-282 (282)
211 cd06646 STKc_MAP4K5 Catalytic 100.0 6E-41 1.3E-45 321.4 21.6 251 138-422 10-267 (267)
212 cd06611 STKc_SLK_like Catalyti 100.0 5.7E-41 1.2E-45 323.9 21.6 256 137-427 5-269 (280)
213 KOG0574 STE20-like serine/thre 100.0 1.7E-43 3.7E-48 322.3 3.7 253 138-426 34-289 (502)
214 cd05578 STKc_Yank1 Catalytic d 100.0 6.9E-41 1.5E-45 319.3 21.8 247 138-423 1-258 (258)
215 KOG0577 Serine/threonine prote 100.0 2.8E-42 6E-47 338.5 12.3 249 139-427 28-285 (948)
216 cd06658 STKc_PAK5 Catalytic do 100.0 4E-41 8.8E-46 327.4 20.4 257 138-432 23-284 (292)
217 PHA02988 hypothetical protein; 100.0 1.3E-40 2.8E-45 322.4 22.9 241 143-419 26-274 (283)
218 cd06645 STKc_MAP4K3 Catalytic 100.0 9.7E-41 2.1E-45 319.9 21.6 252 137-422 9-267 (267)
219 cd06612 STKc_MST1_2 Catalytic 100.0 1.5E-40 3.2E-45 316.2 22.5 251 137-423 3-256 (256)
220 cd08217 STKc_Nek2 Catalytic do 100.0 2.7E-40 5.9E-45 315.5 24.3 252 138-423 1-265 (265)
221 cd05609 STKc_MAST Catalytic do 100.0 3E-40 6.6E-45 323.1 24.9 255 138-429 2-282 (305)
222 cd05572 STKc_cGK_PKG Catalytic 100.0 2E-40 4.3E-45 316.8 22.9 245 145-427 1-259 (262)
223 KOG0668 Casein kinase II, alph 100.0 5E-42 1.1E-46 302.0 10.7 285 137-432 38-334 (338)
224 KOG2345 Serine/threonine prote 100.0 1.7E-41 3.6E-46 302.2 13.7 256 138-420 22-296 (302)
225 cd05633 STKc_GRK3 Catalytic do 100.0 2.1E-40 4.5E-45 320.3 22.6 245 144-427 1-262 (279)
226 cd05577 STKc_GRK Catalytic dom 100.0 1.8E-40 4E-45 320.0 22.0 250 145-428 1-262 (277)
227 cd06652 STKc_MEKK2 Catalytic d 100.0 3.2E-40 6.9E-45 316.1 23.5 250 138-424 3-265 (265)
228 cd06659 STKc_PAK6 Catalytic do 100.0 1.4E-40 3E-45 324.5 21.3 261 139-437 23-288 (297)
229 cd06613 STKc_MAP4K3_like Catal 100.0 3.2E-40 7E-45 315.0 23.4 253 137-422 3-262 (262)
230 cd08218 STKc_Nek1 Catalytic do 100.0 3.1E-40 6.7E-45 314.3 23.1 248 138-423 1-256 (256)
231 cd08221 STKc_Nek9 Catalytic do 100.0 7.3E-40 1.6E-44 311.7 25.2 248 138-423 1-256 (256)
232 cd05096 PTKc_DDR1 Catalytic do 100.0 3.1E-40 6.7E-45 322.9 23.2 254 137-419 5-300 (304)
233 cd06629 STKc_MAPKKK_Bck1_like 100.0 5.3E-40 1.2E-44 315.7 24.4 253 138-423 2-272 (272)
234 cd08225 STKc_Nek5 Catalytic do 100.0 6.1E-40 1.3E-44 312.1 24.0 250 138-423 1-257 (257)
235 cd05106 PTKc_CSF-1R Catalytic 100.0 3.1E-40 6.7E-45 332.1 22.8 251 134-419 35-367 (374)
236 cd06624 STKc_ASK Catalytic dom 100.0 8.8E-40 1.9E-44 313.6 24.5 248 142-423 13-268 (268)
237 cd05606 STKc_beta_ARK Catalyti 100.0 6.3E-40 1.4E-44 316.6 23.0 245 144-427 1-262 (278)
238 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 1.8E-39 3.9E-44 314.9 26.0 266 138-428 2-274 (287)
239 cd06605 PKc_MAPKK Catalytic do 100.0 4.5E-40 9.8E-45 314.7 21.1 254 138-426 2-263 (265)
240 cd06642 STKc_STK25-YSK1 Cataly 100.0 1.5E-40 3.3E-45 320.6 17.9 250 138-427 5-260 (277)
241 cd06640 STKc_MST4 Catalytic do 100.0 5.9E-40 1.3E-44 316.5 21.6 252 138-429 5-262 (277)
242 KOG4645 MAPKKK (MAP kinase kin 100.0 5.8E-42 1.2E-46 362.4 7.7 259 137-432 1235-1506(1509)
243 cd06607 STKc_TAO Catalytic dom 100.0 1E-39 2.2E-44 319.7 22.9 249 138-426 16-273 (307)
244 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 9.5E-40 2.1E-44 316.2 22.1 257 137-427 5-273 (284)
245 cd05064 PTKc_EphR_A10 Catalyti 100.0 7.4E-40 1.6E-44 314.0 21.1 245 137-419 5-260 (266)
246 KOG0670 U4/U6-associated splic 100.0 7.4E-41 1.6E-45 324.4 14.1 279 138-425 433-751 (752)
247 cd06626 STKc_MEKK4 Catalytic d 100.0 3.4E-39 7.5E-44 308.2 25.5 251 138-423 1-264 (264)
248 cd05611 STKc_Rim15_like Cataly 100.0 1.2E-39 2.6E-44 311.1 22.1 246 143-427 2-258 (260)
249 cd06618 PKc_MKK7 Catalytic dom 100.0 1.5E-39 3.3E-44 316.8 23.2 260 134-428 12-281 (296)
250 PHA03390 pk1 serine/threonine- 100.0 1.6E-39 3.5E-44 311.9 23.0 247 138-425 15-267 (267)
251 KOG0608 Warts/lats-like serine 100.0 9.7E-41 2.1E-45 329.8 14.7 271 138-446 630-960 (1034)
252 cd08226 PK_STRAD_beta Pseudoki 100.0 3.7E-40 8.1E-45 325.9 19.0 278 143-429 4-317 (328)
253 cd08219 STKc_Nek3 Catalytic do 100.0 1.6E-39 3.4E-44 309.4 22.6 245 138-420 1-252 (255)
254 cd05104 PTKc_Kit Catalytic dom 100.0 1.2E-39 2.7E-44 328.0 23.1 249 136-419 34-369 (375)
255 cd06647 STKc_PAK_I Catalytic d 100.0 1E-39 2.3E-44 317.6 21.6 255 137-429 19-278 (293)
256 cd06917 STKc_NAK1_like Catalyt 100.0 1.2E-39 2.6E-44 314.0 21.7 253 138-428 2-263 (277)
257 cd06641 STKc_MST3 Catalytic do 100.0 1.4E-39 3E-44 313.9 22.1 251 139-429 6-262 (277)
258 cd08215 STKc_Nek Catalytic dom 100.0 3.3E-39 7.1E-44 306.6 23.9 250 138-423 1-258 (258)
259 cd06623 PKc_MAPKK_plant_like C 100.0 3.1E-39 6.6E-44 308.4 23.9 252 138-427 2-263 (264)
260 KOG0664 Nemo-like MAPK-related 100.0 9.5E-42 2.1E-46 307.3 5.9 285 140-430 56-353 (449)
261 KOG0665 Jun-N-terminal kinase 100.0 1.1E-40 2.3E-45 307.1 12.9 302 138-450 18-339 (369)
262 cd06653 STKc_MEKK3_like_1 Cata 100.0 4.8E-39 1E-43 307.9 24.6 248 138-423 3-264 (264)
263 cd05048 PTKc_Ror Catalytic Dom 100.0 1.7E-39 3.6E-44 314.1 21.6 248 137-420 5-279 (283)
264 cd05061 PTKc_InsR Catalytic do 100.0 3.8E-39 8.2E-44 312.7 24.1 257 135-427 4-287 (288)
265 cd06648 STKc_PAK_II Catalytic 100.0 4E-39 8.7E-44 312.2 24.2 254 139-430 21-279 (285)
266 cd06657 STKc_PAK4 Catalytic do 100.0 1.7E-39 3.8E-44 315.9 21.6 259 139-435 22-285 (292)
267 cd06633 STKc_TAO3 Catalytic do 100.0 6.5E-39 1.4E-43 315.0 25.8 248 139-426 23-279 (313)
268 cd05052 PTKc_Abl Catalytic dom 100.0 4.2E-39 9E-44 308.1 23.8 245 138-419 7-257 (263)
269 cd05579 STKc_MAST_like Catalyt 100.0 2.9E-39 6.3E-44 308.4 22.6 243 145-426 1-263 (265)
270 cd08216 PK_STRAD Pseudokinase 100.0 3E-39 6.5E-44 317.2 22.1 281 139-430 4-305 (314)
271 cd06606 STKc_MAPKKK Catalytic 100.0 9E-39 1.9E-43 303.4 24.2 251 138-423 1-260 (260)
272 cd05089 PTKc_Tie1 Catalytic do 100.0 4.2E-39 9.1E-44 313.9 22.4 247 138-420 3-271 (297)
273 cd05610 STKc_MASTL Catalytic d 100.0 4.8E-39 1E-43 344.9 24.8 141 137-288 4-152 (669)
274 cd05054 PTKc_VEGFR Catalytic d 100.0 3.3E-39 7.2E-44 320.2 21.8 250 137-420 7-329 (337)
275 cd05613 STKc_MSK1_N N-terminal 100.0 6E-39 1.3E-43 311.5 23.2 257 138-429 1-277 (290)
276 cd05114 PTKc_Tec_Rlk Catalytic 100.0 7.5E-39 1.6E-43 305.0 23.4 243 138-419 5-253 (256)
277 cd08228 STKc_Nek6 Catalytic do 100.0 7.2E-39 1.6E-43 306.8 23.2 249 137-419 2-260 (267)
278 cd05581 STKc_PDK1 Catalytic do 100.0 5.1E-39 1.1E-43 309.6 22.0 245 138-423 2-280 (280)
279 cd05062 PTKc_IGF-1R Catalytic 100.0 6.6E-39 1.4E-43 309.1 22.6 249 136-420 5-274 (277)
280 cd05035 PTKc_Axl_like Catalyti 100.0 5.9E-39 1.3E-43 308.1 22.1 250 139-419 1-267 (273)
281 cd05088 PTKc_Tie2 Catalytic do 100.0 3.2E-39 7E-44 315.7 20.6 250 135-420 5-276 (303)
282 cd05122 PKc_STE Catalytic doma 100.0 1.5E-38 3.3E-43 300.6 24.4 249 138-422 1-253 (253)
283 cd05084 PTKc_Fes Catalytic dom 100.0 6.3E-39 1.4E-43 304.7 21.7 239 143-419 1-248 (252)
284 cd05090 PTKc_Ror1 Catalytic do 100.0 6.9E-39 1.5E-43 310.0 22.2 249 136-420 4-279 (283)
285 cd06635 STKc_TAO1 Catalytic do 100.0 1.1E-38 2.3E-43 314.0 23.8 247 139-425 27-282 (317)
286 cd05049 PTKc_Trk Catalytic dom 100.0 5.4E-39 1.2E-43 309.9 21.2 247 137-419 5-276 (280)
287 cd05108 PTKc_EGFR Catalytic do 100.0 5.3E-39 1.1E-43 316.0 21.5 244 137-420 7-264 (316)
288 cd05075 PTKc_Axl Catalytic dom 100.0 8E-39 1.7E-43 307.4 22.2 251 139-420 1-267 (272)
289 cd06627 STKc_Cdc7_like Catalyt 100.0 1.9E-38 4.1E-43 301.0 24.4 247 138-423 1-254 (254)
290 PLN03225 Serine/threonine-prot 100.0 1.3E-38 2.9E-43 333.8 25.6 286 134-432 129-462 (566)
291 cd08222 STKc_Nek11 Catalytic d 100.0 8.7E-39 1.9E-43 305.2 21.9 249 138-423 1-260 (260)
292 cd08530 STKc_CNK2-like Catalyt 100.0 2.2E-38 4.7E-43 301.1 24.6 249 138-423 1-256 (256)
293 cd05091 PTKc_Ror2 Catalytic do 100.0 4.4E-39 9.5E-44 311.2 20.1 247 137-419 5-278 (283)
294 cd05105 PTKc_PDGFR_alpha Catal 100.0 1.4E-38 3E-43 321.9 24.5 249 136-419 36-392 (400)
295 PRK13184 pknD serine/threonine 100.0 1E-38 2.2E-43 341.6 24.8 249 137-419 2-284 (932)
296 cd05113 PTKc_Btk_Bmx Catalytic 100.0 1.2E-38 2.5E-43 303.9 22.3 245 137-420 4-254 (256)
297 cd05036 PTKc_ALK_LTK Catalytic 100.0 1.1E-38 2.3E-43 307.7 22.3 250 136-420 5-274 (277)
298 cd06634 STKc_TAO2 Catalytic do 100.0 1.4E-38 3.1E-43 311.8 23.0 253 138-430 16-277 (308)
299 cd06614 STKc_PAK Catalytic dom 100.0 1.3E-38 2.8E-43 308.5 22.0 255 137-427 19-277 (286)
300 cd05072 PTKc_Lyn Catalytic dom 100.0 1.9E-38 4E-43 303.0 22.7 245 136-419 5-256 (261)
301 cd05093 PTKc_TrkB Catalytic do 100.0 2.1E-38 4.6E-43 307.5 22.8 252 137-426 5-279 (288)
302 KOG1187 Serine/threonine prote 100.0 6.8E-39 1.5E-43 317.4 19.6 262 136-419 74-347 (361)
303 cd05032 PTKc_InsR_like Catalyt 100.0 2E-38 4.3E-43 305.4 22.3 248 136-419 5-273 (277)
304 cd08229 STKc_Nek7 Catalytic do 100.0 1.9E-38 4.2E-43 303.8 21.7 249 137-419 2-260 (267)
305 cd00192 PTKc Catalytic domain 100.0 3.2E-38 7E-43 300.4 22.9 242 143-420 1-260 (262)
306 KOG1035 eIF-2alpha kinase GCN2 100.0 2.1E-39 4.5E-44 341.6 15.7 258 136-424 478-875 (1351)
307 cd05068 PTKc_Frk_like Catalyti 100.0 5.3E-38 1.2E-42 300.0 24.1 244 137-419 6-256 (261)
308 cd05123 STKc_AGC Catalytic dom 100.0 4.5E-38 9.8E-43 298.0 23.4 238 145-423 1-250 (250)
309 cd05148 PTKc_Srm_Brk Catalytic 100.0 1.4E-38 3E-43 303.9 20.0 244 137-419 6-256 (261)
310 cd05059 PTKc_Tec_like Catalyti 100.0 2.1E-38 4.6E-43 302.0 21.2 242 138-419 5-253 (256)
311 cd05033 PTKc_EphR Catalytic do 100.0 3.4E-38 7.4E-43 302.2 22.7 246 137-420 4-261 (266)
312 KOG0695 Serine/threonine prote 100.0 9.2E-39 2E-43 295.3 17.7 255 133-426 246-522 (593)
313 cd05053 PTKc_FGFR Catalytic do 100.0 3.5E-38 7.6E-43 306.5 21.5 249 136-420 11-287 (293)
314 cd05583 STKc_MSK_N N-terminal 100.0 4.7E-38 1E-42 304.9 22.3 256 138-428 1-274 (288)
315 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 1.1E-37 2.4E-42 298.4 24.5 248 137-419 2-260 (267)
316 cd05055 PTKc_PDGFR Catalytic d 100.0 7.8E-38 1.7E-42 305.7 23.9 250 134-419 32-296 (302)
317 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 5E-38 1.1E-42 303.9 22.2 257 139-419 6-276 (283)
318 cd05071 PTKc_Src Catalytic dom 100.0 9.1E-38 2E-42 298.8 23.5 243 137-419 6-255 (262)
319 cd05094 PTKc_TrkC Catalytic do 100.0 6.4E-38 1.4E-42 304.6 22.7 247 137-419 5-277 (291)
320 cd05116 PTKc_Syk Catalytic dom 100.0 6.3E-38 1.4E-42 298.9 22.1 236 144-419 2-250 (257)
321 cd05045 PTKc_RET Catalytic dom 100.0 4.8E-38 1E-42 305.3 21.6 246 138-419 1-281 (290)
322 cd05098 PTKc_FGFR1 Catalytic d 100.0 6E-38 1.3E-42 307.2 22.3 248 136-419 17-294 (307)
323 KOG1151 Tousled-like protein k 100.0 1.2E-39 2.7E-44 310.6 9.8 260 133-425 459-746 (775)
324 cd05051 PTKc_DDR Catalytic dom 100.0 5.8E-38 1.3E-42 305.3 21.9 254 137-419 5-292 (296)
325 cd05109 PTKc_HER2 Catalytic do 100.0 8.2E-38 1.8E-42 301.8 22.7 243 137-419 7-263 (279)
326 cd05103 PTKc_VEGFR2 Catalytic 100.0 5.8E-38 1.3E-42 312.2 22.2 250 137-420 7-335 (343)
327 cd05082 PTKc_Csk Catalytic dom 100.0 1.2E-37 2.5E-42 296.8 23.1 242 137-419 6-251 (256)
328 cd05576 STKc_RPK118_like Catal 100.0 2E-38 4.3E-43 298.9 17.6 228 148-423 4-237 (237)
329 cd05107 PTKc_PDGFR_beta Cataly 100.0 1.1E-37 2.4E-42 315.3 24.1 250 135-419 35-394 (401)
330 PHA02882 putative serine/threo 100.0 1.4E-37 3E-42 302.8 23.8 251 138-419 13-291 (294)
331 cd05066 PTKc_EphR_A Catalytic 100.0 7.9E-38 1.7E-42 299.9 21.7 245 137-419 4-261 (267)
332 cd05097 PTKc_DDR_like Catalyti 100.0 7.1E-38 1.5E-42 304.9 21.6 254 137-419 5-291 (295)
333 cd05101 PTKc_FGFR2 Catalytic d 100.0 1.1E-37 2.3E-42 305.0 22.8 249 135-419 13-291 (304)
334 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 1.4E-37 3.1E-42 296.9 23.0 243 137-419 6-255 (260)
335 cd05092 PTKc_TrkA Catalytic do 100.0 1E-37 2.2E-42 301.5 21.9 246 138-419 6-276 (280)
336 cd05100 PTKc_FGFR3 Catalytic d 100.0 1.3E-37 2.8E-42 308.5 23.0 249 136-420 11-289 (334)
337 cd05065 PTKc_EphR_B Catalytic 100.0 1.4E-37 3.1E-42 298.4 22.6 244 138-419 5-263 (269)
338 cd05039 PTKc_Csk_like Catalyti 100.0 1.8E-37 4E-42 295.3 23.1 241 137-419 6-251 (256)
339 cd05099 PTKc_FGFR4 Catalytic d 100.0 1.8E-37 3.8E-42 304.9 23.7 249 135-419 10-288 (314)
340 cd05115 PTKc_Zap-70 Catalytic 100.0 1.1E-37 2.5E-42 297.3 21.7 237 144-419 2-250 (257)
341 cd05067 PTKc_Lck_Blk Catalytic 100.0 1.7E-37 3.6E-42 296.4 22.7 244 136-419 5-255 (260)
342 cd05034 PTKc_Src_like Catalyti 100.0 2.5E-37 5.3E-42 295.2 23.7 245 136-419 5-256 (261)
343 cd05063 PTKc_EphR_A2 Catalytic 100.0 1.6E-37 3.6E-42 297.7 22.5 245 137-419 5-262 (268)
344 cd05069 PTKc_Yes Catalytic dom 100.0 2.4E-37 5.2E-42 295.4 23.5 243 137-419 6-255 (260)
345 cd05050 PTKc_Musk Catalytic do 100.0 1.3E-37 2.7E-42 301.9 21.8 247 137-419 5-284 (288)
346 cd05047 PTKc_Tie Catalytic dom 100.0 9.7E-38 2.1E-42 299.9 20.8 241 143-419 1-263 (270)
347 cd05040 PTKc_Ack_like Catalyti 100.0 2.4E-37 5.3E-42 294.5 22.9 239 143-419 1-253 (257)
348 cd05043 PTK_Ryk Pseudokinase d 100.0 2.3E-37 5E-42 298.7 22.5 248 137-419 6-271 (280)
349 KOG1026 Nerve growth factor re 100.0 1.6E-38 3.5E-43 326.9 15.0 245 138-418 487-756 (774)
350 cd05111 PTK_HER3 Pseudokinase 100.0 2.8E-37 6E-42 298.3 22.8 243 137-419 7-263 (279)
351 cd05060 PTKc_Syk_like Catalyti 100.0 2.6E-37 5.6E-42 294.6 22.1 236 143-419 1-250 (257)
352 cd05042 PTKc_Aatyk Catalytic d 100.0 2.6E-37 5.7E-42 296.6 22.3 245 144-419 2-265 (269)
353 PF07714 Pkinase_Tyr: Protein 100.0 4.4E-38 9.4E-43 300.7 16.7 242 140-419 2-257 (259)
354 smart00219 TyrKc Tyrosine kina 100.0 3.8E-37 8.3E-42 292.7 22.9 242 140-419 2-256 (258)
355 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 2E-37 4.2E-42 298.7 20.9 236 144-420 2-272 (274)
356 KOG0194 Protein tyrosine kinas 100.0 2.6E-38 5.5E-43 315.6 15.2 254 134-426 154-420 (474)
357 KOG0587 Traf2- and Nck-interac 100.0 6.4E-38 1.4E-42 321.1 18.4 264 133-425 15-287 (953)
358 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 1.9E-37 4.2E-42 296.7 20.7 237 143-420 1-260 (262)
359 cd05112 PTKc_Itk Catalytic dom 100.0 4.3E-37 9.3E-42 292.6 22.9 243 138-419 5-253 (256)
360 cd05046 PTK_CCK4 Pseudokinase 100.0 3.9E-37 8.4E-42 296.2 22.8 249 137-420 5-272 (275)
361 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 3.1E-37 6.6E-42 298.5 22.2 261 138-419 5-278 (284)
362 cd08528 STKc_Nek10 Catalytic d 100.0 5.4E-37 1.2E-41 294.3 23.2 248 139-420 2-266 (269)
363 cd05085 PTKc_Fer Catalytic dom 100.0 4.9E-37 1.1E-41 291.2 22.5 238 143-419 1-246 (250)
364 cd05095 PTKc_DDR2 Catalytic do 100.0 3.2E-37 6.9E-42 300.4 21.7 253 138-419 6-292 (296)
365 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 6.3E-37 1.4E-41 294.0 23.3 246 143-419 1-265 (269)
366 cd05057 PTKc_EGFR_like Catalyt 100.0 4.8E-37 1E-41 296.4 22.6 244 137-419 7-263 (279)
367 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 1.2E-37 2.5E-42 297.3 17.9 237 143-420 1-256 (258)
368 KOG1006 Mitogen-activated prot 100.0 2.6E-39 5.6E-44 290.7 5.9 265 138-431 65-338 (361)
369 cd05056 PTKc_FAK Catalytic dom 100.0 7.3E-37 1.6E-41 293.7 23.1 244 137-419 6-260 (270)
370 KOG4250 TANK binding protein k 100.0 1.7E-38 3.6E-43 319.7 12.0 206 139-345 15-229 (732)
371 cd05073 PTKc_Hck Catalytic dom 100.0 1.2E-36 2.6E-41 290.5 23.5 244 136-419 5-255 (260)
372 cd05041 PTKc_Fes_like Catalyti 100.0 7.5E-37 1.6E-41 290.1 21.8 238 143-419 1-247 (251)
373 KOG1095 Protein tyrosine kinas 100.0 1.7E-37 3.8E-42 330.1 18.6 246 138-419 693-956 (1025)
374 cd05058 PTKc_Met_Ron Catalytic 100.0 9.1E-37 2E-41 291.4 21.8 240 143-419 1-254 (262)
375 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 5.4E-37 1.2E-41 297.0 20.4 259 138-419 5-278 (284)
376 cd05083 PTKc_Chk Catalytic dom 100.0 8.7E-37 1.9E-41 290.4 21.1 240 137-419 6-249 (254)
377 cd05110 PTKc_HER4 Catalytic do 100.0 8.7E-37 1.9E-41 298.5 21.6 243 137-419 7-263 (303)
378 cd05044 PTKc_c-ros Catalytic d 100.0 8.9E-37 1.9E-41 292.6 20.0 242 143-419 1-265 (269)
379 cd05074 PTKc_Tyro3 Catalytic d 100.0 1.5E-36 3.2E-41 291.8 21.3 250 139-419 1-267 (273)
380 cd05086 PTKc_Aatyk2 Catalytic 100.0 4.7E-36 1E-40 288.0 24.1 245 144-419 2-264 (268)
381 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 2.6E-36 5.6E-41 287.5 20.6 235 143-419 1-256 (259)
382 KOG4257 Focal adhesion tyrosin 100.0 6.7E-37 1.5E-41 302.4 15.0 241 139-418 391-643 (974)
383 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 1.1E-35 2.3E-40 287.2 20.8 260 138-419 5-278 (284)
384 PLN03224 probable serine/threo 100.0 2.3E-35 5E-40 302.3 24.0 274 134-425 142-505 (507)
385 KOG0199 ACK and related non-re 100.0 3.8E-36 8.2E-41 300.4 14.6 250 138-426 111-374 (1039)
386 KOG4278 Protein tyrosine kinas 100.0 1.1E-35 2.3E-40 293.5 17.4 242 138-417 268-516 (1157)
387 KOG1094 Discoidin domain recep 100.0 3.3E-35 7.2E-40 288.8 20.0 251 137-419 538-799 (807)
388 KOG1027 Serine/threonine prote 100.0 3.7E-36 7.9E-41 306.9 13.0 251 138-425 510-772 (903)
389 smart00220 S_TKc Serine/Threon 100.0 2.4E-34 5.3E-39 269.8 22.1 238 149-423 1-244 (244)
390 KOG1167 Serine/threonine prote 100.0 2.6E-35 5.7E-40 281.0 13.5 281 136-428 35-389 (418)
391 KOG0196 Tyrosine kinase, EPH ( 100.0 6.5E-36 1.4E-40 302.4 9.5 244 138-419 630-886 (996)
392 PLN00113 leucine-rich repeat r 100.0 6.8E-34 1.5E-38 319.6 19.7 257 138-426 691-951 (968)
393 KOG0984 Mitogen-activated prot 100.0 2.3E-34 5E-39 250.0 11.7 213 136-354 45-267 (282)
394 KOG2052 Activin A type IB rece 100.0 5.1E-33 1.1E-37 266.3 16.9 264 125-418 194-497 (513)
395 KOG3653 Transforming growth fa 100.0 7.3E-33 1.6E-37 267.1 13.4 268 139-422 212-507 (534)
396 KOG1152 Signal transduction se 100.0 5.7E-33 1.2E-37 272.9 11.6 201 132-342 556-771 (772)
397 KOG0576 Mitogen-activated prot 100.0 2.9E-33 6.2E-38 279.1 5.3 255 137-425 15-276 (829)
398 KOG0200 Fibroblast/platelet-de 100.0 4.9E-31 1.1E-35 279.2 21.2 247 138-419 297-574 (609)
399 KOG1025 Epidermal growth facto 100.0 3.9E-31 8.4E-36 268.8 14.9 241 139-419 698-952 (1177)
400 cd00180 PKc Catalytic domain o 100.0 7.2E-29 1.6E-33 226.8 21.1 207 145-421 1-215 (215)
401 KOG1345 Serine/threonine kinas 100.0 9.7E-31 2.1E-35 236.1 8.4 247 136-415 23-279 (378)
402 PLN00181 protein SPA1-RELATED; 100.0 2.7E-30 5.8E-35 283.7 11.3 208 185-427 27-272 (793)
403 KOG1024 Receptor-like protein 100.0 4.8E-29 1E-33 235.3 14.7 248 137-419 284-550 (563)
404 smart00221 STYKc Protein kinas 100.0 2.9E-28 6.3E-33 226.4 19.8 203 139-352 1-213 (225)
405 smart00750 KIND kinase non-cat 99.9 1.9E-27 4.2E-32 213.3 11.6 156 232-424 11-169 (176)
406 KOG0590 Checkpoint kinase and 99.9 3.4E-28 7.3E-33 254.7 7.2 259 139-428 319-593 (601)
407 KOG1164 Casein kinase (serine/ 99.9 2.8E-25 6E-30 218.8 22.7 250 138-419 19-292 (322)
408 KOG1163 Casein kinase (serine/ 99.9 2.3E-25 4.9E-30 198.3 16.5 209 137-355 15-239 (341)
409 KOG0606 Microtubule-associated 99.9 4.8E-26 1E-30 238.5 10.1 245 135-449 81-344 (1205)
410 KOG1165 Casein kinase (serine/ 99.9 1.8E-24 3.9E-29 200.8 19.2 214 138-361 29-260 (449)
411 PRK09188 serine/threonine prot 99.9 2E-25 4.3E-30 220.0 13.4 157 136-312 17-193 (365)
412 COG0515 SPS1 Serine/threonine 99.9 9.7E-24 2.1E-28 205.6 24.0 264 139-430 2-285 (384)
413 KOG0603 Ribosomal protein S6 k 99.9 1.3E-25 2.8E-30 225.1 5.1 237 144-429 1-252 (612)
414 KOG4158 BRPK/PTEN-induced prot 99.9 1.6E-23 3.5E-28 198.6 12.1 195 188-415 274-505 (598)
415 PF14531 Kinase-like: Kinase-l 99.9 5.5E-23 1.2E-27 194.5 12.8 237 138-411 13-288 (288)
416 KOG1240 Protein kinase contain 99.9 4.1E-23 8.9E-28 216.8 8.2 241 138-420 24-291 (1431)
417 cd05147 RIO1_euk RIO kinase fa 99.9 2.8E-22 6.1E-27 181.8 11.1 135 142-290 2-167 (190)
418 PRK10359 lipopolysaccharide co 99.9 9.9E-22 2.2E-26 180.6 10.5 170 137-334 31-216 (232)
419 PRK12274 serine/threonine prot 99.9 3.9E-21 8.5E-26 173.1 13.8 181 140-343 5-210 (218)
420 cd05145 RIO1_like RIO kinase f 99.9 5E-21 1.1E-25 174.0 13.1 137 142-291 2-168 (190)
421 KOG0195 Integrin-linked kinase 99.8 5.1E-21 1.1E-25 173.4 8.6 239 138-418 191-440 (448)
422 KOG1033 eIF-2alpha kinase PEK/ 99.8 3E-20 6.5E-25 183.4 8.2 181 207-424 328-516 (516)
423 PRK10345 hypothetical protein; 99.8 5.2E-19 1.1E-23 162.0 13.7 133 142-287 7-156 (210)
424 KOG1166 Mitotic checkpoint ser 99.8 3E-19 6.5E-24 191.3 13.5 189 137-337 698-900 (974)
425 smart00090 RIO RIO-like kinase 99.8 3.8E-19 8.2E-24 166.8 11.2 139 138-289 29-197 (237)
426 KOG0590 Checkpoint kinase and 99.7 3.2E-19 6.9E-24 187.3 1.8 257 138-425 21-291 (601)
427 cd05144 RIO2_C RIO kinase fami 99.7 1.6E-17 3.5E-22 152.0 11.7 131 139-290 17-175 (198)
428 PRK14879 serine/threonine prot 99.7 4E-17 8.6E-22 150.8 12.4 130 143-289 2-143 (211)
429 KOG1023 Natriuretic peptide re 99.7 2.3E-17 5E-22 166.0 10.4 206 184-419 1-219 (484)
430 TIGR03724 arch_bud32 Kae1-asso 99.7 9.7E-17 2.1E-21 146.8 12.5 126 144-289 1-138 (199)
431 PRK09605 bifunctional UGMP fam 99.7 1.3E-16 2.8E-21 167.8 12.1 131 138-289 334-476 (535)
432 cd05119 RIO RIO kinase family, 99.7 5.3E-16 1.2E-20 140.5 11.7 131 142-290 2-164 (187)
433 cd05120 APH_ChoK_like Aminogly 99.6 1.9E-15 4.2E-20 130.9 9.4 131 141-289 2-138 (155)
434 KOG0601 Cyclin-dependent kinas 99.6 4.7E-15 1E-19 149.5 12.4 247 138-425 115-384 (524)
435 PRK01723 3-deoxy-D-manno-octul 99.6 1.4E-14 3E-19 136.2 14.0 133 143-289 37-191 (239)
436 KOG0606 Microtubule-associated 99.6 2.2E-15 4.8E-20 159.1 5.4 271 136-443 803-1115(1205)
437 KOG1266 Protein kinase [Signal 99.5 6.2E-14 1.4E-18 131.0 7.6 242 152-428 81-339 (458)
438 PRK04750 ubiB putative ubiquin 99.4 5.2E-13 1.1E-17 137.9 7.6 142 138-292 121-316 (537)
439 TIGR01982 UbiB 2-polyprenylphe 99.4 2.6E-12 5.6E-17 131.1 12.3 138 142-291 122-308 (437)
440 KOG1243 Protein kinase [Genera 99.4 9.3E-12 2E-16 127.1 16.0 180 139-336 15-199 (690)
441 cd05151 ChoK Choline Kinase (C 99.4 2.2E-12 4.8E-17 114.6 10.1 123 143-288 4-135 (170)
442 KOG0601 Cyclin-dependent kinas 99.3 5.7E-13 1.2E-17 134.5 4.1 249 136-427 264-521 (524)
443 cd05146 RIO3_euk RIO kinase fa 99.3 1.5E-11 3.3E-16 110.9 10.4 133 143-290 3-174 (197)
444 KOG3741 Poly(A) ribonuclease s 99.3 2.1E-10 4.7E-15 113.8 16.9 214 150-419 289-520 (655)
445 KOG2137 Protein kinase [Signal 99.2 1.3E-11 2.8E-16 126.5 5.2 159 246-431 107-276 (700)
446 COG4248 Uncharacterized protei 99.1 1.7E-09 3.6E-14 105.0 16.6 255 141-416 15-292 (637)
447 KOG3087 Serine/threonine prote 99.1 4.9E-10 1.1E-14 97.5 11.3 139 141-289 11-165 (229)
448 COG3642 Mn2+-dependent serine/ 99.1 1.3E-09 2.8E-14 95.4 12.0 127 143-289 2-140 (204)
449 cd05154 ACAD10_11_like Acyl-Co 99.0 2.3E-09 5E-14 99.3 11.2 140 143-289 4-206 (223)
450 PF01163 RIO1: RIO1 family; I 98.9 3.8E-09 8.2E-14 94.9 9.3 121 152-290 1-156 (188)
451 PRK15123 lipopolysaccharide co 98.9 3.2E-08 6.9E-13 94.3 15.3 133 151-288 36-193 (268)
452 COG0478 RIO-like serine/threon 98.8 1.5E-08 3.2E-13 94.0 8.8 131 138-288 92-250 (304)
453 KOG0576 Mitogen-activated prot 98.7 2.1E-09 4.6E-14 109.3 0.6 253 138-433 243-497 (829)
454 PF06293 Kdo: Lipopolysacchari 98.6 6.9E-07 1.5E-11 82.1 12.4 107 177-289 58-170 (206)
455 PRK09902 hypothetical protein; 98.5 2.4E-06 5.3E-11 77.5 14.6 139 145-289 26-179 (216)
456 COG0661 AarF Predicted unusual 98.5 2E-07 4.3E-12 96.2 7.9 138 143-292 131-317 (517)
457 PF06176 WaaY: Lipopolysacchar 98.5 2.6E-06 5.7E-11 77.6 13.2 135 138-288 32-182 (229)
458 KOG1035 eIF-2alpha kinase GCN2 98.5 5.8E-07 1.2E-11 97.7 9.8 206 177-427 229-441 (1351)
459 COG1718 RIO1 Serine/threonine 98.4 3.4E-06 7.3E-11 77.7 12.0 131 144-290 55-216 (268)
460 PF01636 APH: Phosphotransfera 98.3 7.1E-06 1.5E-10 76.3 11.0 77 142-222 2-82 (239)
461 COG2112 Predicted Ser/Thr prot 98.2 7.6E-06 1.6E-10 71.4 9.1 127 140-289 25-155 (201)
462 KOG1235 Predicted unusual prot 98.2 1.1E-05 2.5E-10 83.1 11.3 140 142-291 166-356 (538)
463 TIGR02172 Fb_sc_TIGR02172 Fibr 98.1 2.3E-05 4.9E-10 73.1 11.5 135 143-288 7-181 (226)
464 PF13095 FTA2: Kinetochore Sim 98.0 3.2E-05 7E-10 69.7 9.4 126 137-287 37-206 (207)
465 PLN02876 acyl-CoA dehydrogenas 97.9 0.00013 2.8E-09 81.0 14.0 77 142-220 43-129 (822)
466 cd05150 APH Aminoglycoside 3'- 97.9 9.4E-05 2E-09 69.8 11.1 68 149-223 11-80 (244)
467 cd05155 APH_ChoK_like_1 Unchar 97.6 0.00037 8.1E-09 65.3 10.2 30 258-288 164-193 (235)
468 KOG2270 Serine/threonine prote 97.6 0.00054 1.2E-08 66.7 10.0 137 140-289 147-313 (520)
469 TIGR02721 ycfN_thiK thiamine k 97.5 0.00037 8.1E-09 66.2 9.0 132 145-289 4-175 (256)
470 PF10707 YrbL-PhoP_reg: PhoP r 97.5 0.00095 2.1E-08 60.6 10.9 127 143-283 7-165 (199)
471 PRK09550 mtnK methylthioribose 97.5 0.001 2.2E-08 66.9 12.1 70 143-219 32-115 (401)
472 PF12260 PIP49_C: Protein-kina 97.5 0.00024 5.3E-09 64.1 7.0 102 178-290 7-112 (188)
473 cd05157 ETNK_euk Ethanolamine 97.5 0.0019 4.1E-08 60.4 13.0 69 143-220 4-77 (235)
474 PRK10593 hypothetical protein; 97.4 0.0025 5.5E-08 62.0 13.2 75 142-220 19-98 (297)
475 KOG2268 Serine/threonine prote 97.4 0.00019 4.1E-09 68.6 4.2 128 139-287 94-249 (465)
476 KOG1826 Ras GTPase activating 97.3 0.00014 3.1E-09 81.5 3.5 213 180-425 1279-1497(2724)
477 cd05153 HomoserineK_II Homoser 97.3 0.00078 1.7E-08 65.4 8.4 144 142-288 19-204 (296)
478 TIGR00938 thrB_alt homoserine 97.2 0.0039 8.5E-08 60.9 12.1 144 142-288 27-216 (307)
479 PRK05231 homoserine kinase; Pr 97.1 0.0078 1.7E-07 59.1 13.4 30 258-288 187-216 (319)
480 KOG1093 Predicted protein kina 97.1 0.00041 8.9E-09 70.1 3.8 204 180-462 32-237 (725)
481 TIGR01767 MTRK 5-methylthiorib 97.0 0.0087 1.9E-07 59.1 11.6 69 144-219 2-84 (370)
482 PLN02236 choline kinase 96.8 0.0096 2.1E-07 59.2 10.5 137 144-289 43-231 (344)
483 cd05156 ChoK_euk Choline Kinas 96.8 0.013 2.8E-07 57.1 11.1 69 143-220 4-82 (302)
484 PRK12396 5-methylribose kinase 96.7 0.01 2.2E-07 59.3 10.2 71 142-219 34-117 (409)
485 COG3173 Predicted aminoglycosi 96.7 0.015 3.3E-07 56.6 10.9 32 259-291 199-230 (321)
486 TIGR02906 spore_CotS spore coa 96.7 0.027 5.8E-07 55.0 12.7 29 258-288 187-215 (313)
487 cd05152 MPH2' Macrolide 2'-Pho 96.5 0.013 2.9E-07 56.2 9.3 31 259-289 186-216 (276)
488 PLN02421 phosphotransferase, a 96.4 0.02 4.3E-07 56.6 10.1 30 260-289 184-213 (330)
489 TIGR02904 spore_ysxE spore coa 96.2 0.052 1.1E-06 53.1 11.4 31 258-289 196-226 (309)
490 PLN02756 S-methyl-5-thioribose 96.1 0.092 2E-06 52.9 12.6 69 142-219 37-119 (418)
491 COG5072 ALK1 Serine/threonine 95.9 0.027 5.9E-07 55.1 7.7 106 205-326 296-401 (488)
492 PTZ00384 choline kinase; Provi 95.2 0.18 3.8E-06 50.9 11.0 30 258-289 227-256 (383)
493 COG2334 Putative homoserine ki 95.1 0.21 4.5E-06 49.2 10.7 137 149-288 37-227 (331)
494 PF03881 Fructosamin_kin: Fruc 94.5 0.25 5.3E-06 47.7 9.4 72 142-220 22-97 (288)
495 KOG2269 Serine/threonine prote 93.0 0.093 2E-06 50.7 3.5 93 179-288 334-431 (531)
496 PTZ00296 choline kinase; Provi 92.9 1.3 2.8E-05 45.5 12.0 71 141-220 109-191 (442)
497 PHA03111 Ser/Thr kinase; Provi 92.1 0.18 3.8E-06 48.9 4.1 38 238-275 279-319 (444)
498 PRK10271 thiK thiamine kinase; 92.1 0.12 2.6E-06 46.3 2.8 29 259-289 78-106 (188)
499 PF05445 Pox_ser-thr_kin: Poxv 92.0 0.16 3.6E-06 49.4 3.8 52 238-289 275-346 (434)
500 KOG1236 Predicted unusual prot 92.0 0.34 7.5E-06 48.4 6.0 61 210-275 320-381 (565)
No 1
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.3e-73 Score=533.41 Aligned_cols=347 Identities=73% Similarity=1.186 Sum_probs=331.3
Q ss_pred ceeeeccCCCCCCCCcccceEEeceecccCceEEEEEEEcCCCCEEEEEEeecccchHHHHHHHHHHcCCCCccccccee
Q 012233 120 QVIATTVGGRNGQPKQTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRYKNRELQIMRLLNHPNVVSLKHCF 199 (468)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~ 199 (468)
....+...+....+.....|...+++|.|+||.||+|....+++.||||++..+.++..+|+.+|+.+.|||||+|..+|
T Consensus 7 ~~~~~~~~~~~~~~~~~i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~knrEl~im~~l~HpNIV~L~~~f 86 (364)
T KOG0658|consen 7 HVIQTVAEGRNDGKKVEISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYKNRELQIMRKLDHPNIVRLLYFF 86 (364)
T ss_pred eEEEEEeecCCCCcceEEEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCcCcHHHHHHHhcCCcCeeeEEEEE
Confidence 34455556666677788899999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCceEEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcE
Q 012233 200 FSTTEKDELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQL 279 (468)
Q Consensus 200 ~~~~~~~~~~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~v 279 (468)
....+.+..|+.+||||++.++++.++++...+..++...++.|++||++||.|||+ .||+||||||.|+|||.+.+.+
T Consensus 87 ~~~~~~d~~~lnlVleymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~-~~IcHRDIKPqNlLvD~~tg~L 165 (364)
T KOG0658|consen 87 SSSTESDEVYLNLVLEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHS-HGICHRDIKPQNLLVDPDTGVL 165 (364)
T ss_pred EecCCCchhHHHHHHHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHh-cCcccCCCChheEEEcCCCCeE
Confidence 888877678999999999999999999999999999999999999999999999998 9999999999999999997799
Q ss_pred EEeeecCccccCCCCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCC
Q 012233 280 KICDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTP 359 (468)
Q Consensus 280 kL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~ 359 (468)
||||||.|+.+..+++..++.+|..|+|||.+.|...|+.+.||||.||++.||+.|++.|+|.+..+++..|++.+|.|
T Consensus 166 KicDFGSAK~L~~~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~P 245 (364)
T KOG0658|consen 166 KICDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTP 245 (364)
T ss_pred EeccCCcceeeccCCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCCCCCCCCCCCCCC
Q 012233 360 TREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNTCLPNGRPL 439 (468)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~~~~~~~~~~~~~ 439 (468)
+.+.+.+|++++.++++|.++..+|.+.+...+++++.+|+.++|+++|.+|.++.|+|.||||.++++++..+++++++
T Consensus 246 t~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr~~~~~l~~g~~l 325 (364)
T KOG0658|consen 246 TREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELRDPNTKLPNGRPL 325 (364)
T ss_pred CHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhhCcCccCcCCCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccCHHHHhcCCHHHHHhcccccccC
Q 012233 440 PTLFNFTAQELAGASNELRQRLIPEHARK 468 (468)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (468)
|++|+|++. ..+...|.+..++|+|.|+
T Consensus 326 p~lf~f~~~-e~~~~~~~~~~l~p~~~~~ 353 (364)
T KOG0658|consen 326 PPLFNFKRA-ELGISPELVNVLIPEHLRE 353 (364)
T ss_pred CCccCchHH-HhccchHHHHhhccHhhhh
Confidence 999999977 7889999999999999874
No 2
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=4.7e-57 Score=462.99 Aligned_cols=329 Identities=52% Similarity=0.992 Sum_probs=294.7
Q ss_pred cceEEeceecccCceEEEEEEEcCCCCEEEEEEeecccchHHHHHHHHHHcCCCCcccccceeeecC---CCCceEEEEE
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRYKNRELQIMRLLNHPNVVSLKHCFFSTT---EKDELYLNLV 213 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~---~~~~~~~~lv 213 (468)
.+|.+.+.||+|+||.||+|.+..+++.||||++........+|+.+|+.++||||++++++|+... .....++++|
T Consensus 66 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~lv 145 (440)
T PTZ00036 66 KSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDPQYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLNVV 145 (440)
T ss_pred CeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCcchHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEEEEE
Confidence 4699999999999999999999999999999999877777778999999999999999999875432 1234578899
Q ss_pred eecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCCC
Q 012233 214 LEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPG 293 (468)
Q Consensus 214 ~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~~ 293 (468)
|||+++++...+..+......+++..++.++.||+.||.|||+ +||+||||||+||||+.++..+||+|||+++.+...
T Consensus 146 mE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~-~~IiHrDLKp~NILl~~~~~~vkL~DFGla~~~~~~ 224 (440)
T PTZ00036 146 MEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHS-KFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAG 224 (440)
T ss_pred EecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCEecCCcCHHHEEEcCCCCceeeeccccchhccCC
Confidence 9999999888777666667789999999999999999999998 899999999999999977657999999999877655
Q ss_pred CCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCCcc
Q 012233 294 EPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTE 373 (468)
Q Consensus 294 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 373 (468)
......+||+.|+|||++.+...++.++|||||||++|||++|.+||.+.+..+.+.++++.++.|..+.+..+.+.+..
T Consensus 225 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~ 304 (440)
T PTZ00036 225 QRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYAD 304 (440)
T ss_pred CCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhc
Confidence 55566788999999999877666999999999999999999999999999999999999999999999999989999999
Q ss_pred CCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCCCCCCCCCC-CCCCCcccccCHHHHhc
Q 012233 374 FKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNTCLPN-GRPLPTLFNFTAQELAG 452 (468)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 452 (468)
+.++.+....+...++...++++++||.+||++||.+|||+.|+|.||||++++++...++. ...+|.+++|++.++.+
T Consensus 305 ~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (440)
T PTZ00036 305 IKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDLRDPCIKLPKYIDKLPDLFNFCDAEIKE 384 (440)
T ss_pred ccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhhhcccccCCCCCCCCCCCcCCCHHHHhh
Confidence 99998888888888888899999999999999999999999999999999999887666555 46789999999999999
Q ss_pred CCHHHHHhcccccc
Q 012233 453 ASNELRQRLIPEHA 466 (468)
Q Consensus 453 ~~~~~~~~~~~~~~ 466 (468)
+.++.+++++|.+.
T Consensus 385 ~~~~~~~~~~~~~~ 398 (440)
T PTZ00036 385 MSDACRRKIIPKCT 398 (440)
T ss_pred CCHHHHHHHhhHHH
Confidence 99999999998653
No 3
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=1.1e-57 Score=415.76 Aligned_cols=282 Identities=36% Similarity=0.651 Sum_probs=250.4
Q ss_pred cceEEeceecccCceEEEEEEEcCCCCEEEEEEeecccc------hHHHHHHHHHHcCCCCcccccceeeecCCCCceEE
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKR------YKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYL 210 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~~------~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~ 210 (468)
+.|...-.+|+|+||.||+|+++.+|+.||||++...+. ...||+++|++|.|+|+|.|+.+| .....+
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVF-----rrkrkl 76 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVF-----RRKRKL 76 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHH-----Hhccee
Confidence 358888899999999999999999999999999965543 345899999999999999999999 777789
Q ss_pred EEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCcccc
Q 012233 211 NLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (468)
Q Consensus 211 ~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~ 290 (468)
++|+|||..++++.+.. ....++...++.|++|++.|+.|+|+ +++||||||||||||+.++ .+||||||+|+.+
T Consensus 77 hLVFE~~dhTvL~eLe~---~p~G~~~~~vk~~l~Q~l~ai~~cHk-~n~IHRDIKPENILit~~g-vvKLCDFGFAR~L 151 (396)
T KOG0593|consen 77 HLVFEYCDHTVLHELER---YPNGVPSELVKKYLYQLLKAIHFCHK-NNCIHRDIKPENILITQNG-VVKLCDFGFARTL 151 (396)
T ss_pred EEEeeecchHHHHHHHh---ccCCCCHHHHHHHHHHHHHHhhhhhh-cCeecccCChhheEEecCC-cEEeccchhhHhh
Confidence 99999999998886554 46789999999999999999999998 9999999999999999998 8999999999988
Q ss_pred C-CCCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHH--hhc
Q 012233 291 V-PGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEI--KCM 367 (468)
Q Consensus 291 ~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~--~~~ 367 (468)
. ++...+.++.|.+|+|||.+.|...|+..+||||+||++.||++|.+.|++.+..+++..|...+|.-.+... -..
T Consensus 152 ~~pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~ 231 (396)
T KOG0593|consen 152 SAPGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSS 231 (396)
T ss_pred cCCcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhcc
Confidence 7 6777778899999999999999888999999999999999999999999999999999999999997666544 456
Q ss_pred CCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCCC
Q 012233 368 NPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRD 428 (468)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~~ 428 (468)
++.|..+.+|......-.+.-.+.++.-+.||+++||+.||.+|++-+|+|.||||.++.+
T Consensus 232 N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd~~~e 292 (396)
T KOG0593|consen 232 NPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFDGFIE 292 (396)
T ss_pred CCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcChHHHHHHH
Confidence 6888899999866544333344567889999999999999999999999999999977543
No 4
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.3e-58 Score=436.23 Aligned_cols=260 Identities=34% Similarity=0.494 Sum_probs=216.2
Q ss_pred cceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc-----------chHHHHHHHHHHcCCCCcccccceeeecCCC
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-----------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEK 205 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-----------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 205 (468)
+.|.+.+.||+|+||.|-+|..+.+|+.||||++.+.. ....+|++||++|+|||||+++++| .
T Consensus 172 d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f-----~ 246 (475)
T KOG0615|consen 172 DYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFF-----E 246 (475)
T ss_pred ceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeee-----e
Confidence 46899999999999999999999999999999985532 1235899999999999999999999 4
Q ss_pred CceEEEEEeecccch-HHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCC--CcEEEe
Q 012233 206 DELYLNLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHT--HQLKIC 282 (468)
Q Consensus 206 ~~~~~~lv~e~~~~~-ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~--~~vkL~ 282 (468)
...+.||||||+.|| +.+.+- .++.+.+..-+.+++|++.||.|||+ +||+||||||+|||+..+. ..+||+
T Consensus 247 ~~ds~YmVlE~v~GGeLfd~vv----~nk~l~ed~~K~~f~Qll~avkYLH~-~GI~HRDiKPeNILl~~~~e~~llKIt 321 (475)
T KOG0615|consen 247 VPDSSYMVLEYVEGGELFDKVV----ANKYLREDLGKLLFKQLLTAVKYLHS-QGIIHRDIKPENILLSNDAEDCLLKIT 321 (475)
T ss_pred cCCceEEEEEEecCccHHHHHH----hccccccchhHHHHHHHHHHHHHHHH-cCcccccCCcceEEeccCCcceEEEec
Confidence 555689999999976 333332 25667777889999999999999998 8999999999999997662 259999
Q ss_pred eecCccccCCCCCCccccccCCccccccccCCC--CCCcchhHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHHHhCCC
Q 012233 283 DFGSAKMLVPGEPNISYICSRYYRAPELIFGAT--EYTTAIDMWSIGCVLAELLLGQPLFPGESGVD-QLVEIIKILGTP 359 (468)
Q Consensus 283 DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~-~~~~i~~~~~~~ 359 (468)
|||+|+....+....+.||||.|.|||++.+.. .+..++|+||+||+||-+|+|.+||....... ...+|.+.
T Consensus 322 DFGlAK~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G---- 397 (475)
T KOG0615|consen 322 DFGLAKVSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKG---- 397 (475)
T ss_pred ccchhhccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcC----
Confidence 999999988888888999999999999996442 25568999999999999999999998876555 33444331
Q ss_pred CHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCCCCCC
Q 012233 360 TREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNT 431 (468)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~~~~~ 431 (468)
...+....|..+++++.+||.+||..||+.|||++|+|+||||+..+....
T Consensus 398 ---------------------~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~~~~s~ 448 (475)
T KOG0615|consen 398 ---------------------RYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNHPWFKDAPCLSK 448 (475)
T ss_pred ---------------------cccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhcccccch
Confidence 111222356779999999999999999999999999999999998876653
No 5
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-57 Score=438.72 Aligned_cols=283 Identities=37% Similarity=0.655 Sum_probs=253.6
Q ss_pred ccceEEeceecccCceEEEEEEEcCCCCEEEEEEeecccc-----hHHHHHHHHHHcC-CCCcccccceeeecCCCCceE
Q 012233 136 TISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKR-----YKNRELQIMRLLN-HPNVVSLKHCFFSTTEKDELY 209 (468)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~~-----~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~~~~ 209 (468)
.++|.+.+.||.|.||.||+|+.+.+|+.||||.+++.-. ...||++-|++|+ |||||+|.+++.... ..
T Consensus 9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~----~~ 84 (538)
T KOG0661|consen 9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDND----RI 84 (538)
T ss_pred HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccC----ce
Confidence 4579999999999999999999999999999998865432 2347999999999 999999999984322 17
Q ss_pred EEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccc
Q 012233 210 LNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (468)
Q Consensus 210 ~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~ 289 (468)
+|+|||||...++++++.. ++.|++..++.|++||+.||+|+|+ +|+.||||||||||+.... .|||+|||+|+.
T Consensus 85 L~fVfE~Md~NLYqLmK~R---~r~fse~~irnim~QilqGL~hiHk-~GfFHRDlKPENiLi~~~~-~iKiaDFGLARe 159 (538)
T KOG0661|consen 85 LYFVFEFMDCNLYQLMKDR---NRLFSESDIRNIMYQILQGLAHIHK-HGFFHRDLKPENILISGND-VIKIADFGLARE 159 (538)
T ss_pred EeeeHHhhhhhHHHHHhhc---CCcCCHHHHHHHHHHHHHHHHHHHh-cCcccccCChhheEecccc-eeEecccccccc
Confidence 9999999999999988764 6889999999999999999999998 9999999999999999665 799999999999
Q ss_pred cCCCCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhc--
Q 012233 290 LVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCM-- 367 (468)
Q Consensus 290 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~-- 367 (468)
+....+.+.++.|.+|+|||++.....|+.++|||++|||++|+.+-++.|+|.+..|++.+|++++|+|....|...
T Consensus 160 v~SkpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~ 239 (538)
T KOG0661|consen 160 VRSKPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYN 239 (538)
T ss_pred cccCCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHH
Confidence 988888889999999999999998888999999999999999999999999999999999999999999998877542
Q ss_pred CCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCCC
Q 012233 368 NPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRD 428 (468)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~~ 428 (468)
-.+-..+.||..+..++...++. ++.++.+||.+||.+||.+||||.|+|+||||+.-..
T Consensus 240 La~~mnf~~P~~~~~~l~~L~p~-~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~~~~ 299 (538)
T KOG0661|consen 240 LASAMNFRFPQVKPSPLKDLLPN-ASSEAASLIERLLAWDPDKRPTASQALQHPFFQVGRA 299 (538)
T ss_pred HHHHhccCCCcCCCCChHHhCcc-cCHHHHHHHHHHhcCCCccCccHHHHhcCcccccccc
Confidence 13335678888888888887777 9999999999999999999999999999999997443
No 6
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.2e-55 Score=435.54 Aligned_cols=263 Identities=32% Similarity=0.531 Sum_probs=227.6
Q ss_pred cceEEeceecccCceEEEEEEEcCCCCEEEEEEeecc-------cchHHHHHHHHHHcCCCCcccccceeeecCCCCceE
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD-------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELY 209 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~-------~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~ 209 (468)
..|...++||+|||++||.+++..+|+.||+|++.+. .....+|++|.+.|+|||||+++++| +|..+
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~F-----EDs~n 92 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFF-----EDSNN 92 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEe-----ecCCc
Confidence 4699999999999999999999999999999999652 23345799999999999999999999 88889
Q ss_pred EEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccc
Q 012233 210 LNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (468)
Q Consensus 210 ~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~ 289 (468)
+|||+|+|..+.+..+. +..+.+++.+++.+++||+.||.|||+ ++|||||||..|+||+.+. +|||+|||+|..
T Consensus 93 VYivLELC~~~sL~el~---Krrk~ltEpEary~l~QIv~GlkYLH~-~~IiHRDLKLGNlfL~~~~-~VKIgDFGLAt~ 167 (592)
T KOG0575|consen 93 VYIVLELCHRGSLMELL---KRRKPLTEPEARYFLRQIVEGLKYLHS-LGIIHRDLKLGNLFLNENM-NVKIGDFGLATQ 167 (592)
T ss_pred eEEEEEecCCccHHHHH---HhcCCCCcHHHHHHHHHHHHHHHHHHh-cCceecccchhheeecCcC-cEEecccceeee
Confidence 99999999966544322 235779999999999999999999998 8999999999999999998 799999999998
Q ss_pred cCC-CCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcC
Q 012233 290 LVP-GEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMN 368 (468)
Q Consensus 290 ~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 368 (468)
+.. ++...+.||||.|.|||++... ..+..+||||+||+||.||+|++||...+-.+.+.+|..
T Consensus 168 le~~~Erk~TlCGTPNYIAPEVl~k~-gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~-------------- 232 (592)
T KOG0575|consen 168 LEYDGERKKTLCGTPNYIAPEVLNKS-GHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKL-------------- 232 (592)
T ss_pred ecCcccccceecCCCcccChhHhccC-CCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHh--------------
Confidence 864 4788899999999999999754 589999999999999999999999999888888888876
Q ss_pred CCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCC----CCCCCCCCCCCCCC
Q 012233 369 PNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDD----LRDPNTCLPNGRPL 439 (468)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~----~~~~~~~~~~~~~~ 439 (468)
.++.+ |..++.++++||.+||+.||.+|||++++|.|+||+. -+.+..|+...+..
T Consensus 233 ---~~Y~~------------P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~~g~~p~~lp~~~l~~~p~~ 292 (592)
T KOG0575|consen 233 ---NEYSM------------PSHLSAEAKDLIRKLLRPNPSERPSLDEVLDHPFFKSGFTPARLPSSCLTMVPRF 292 (592)
T ss_pred ---cCccc------------ccccCHHHHHHHHHHhcCCcccCCCHHHHhcCHhhhCCCcCCCCCccccccCCcC
Confidence 34443 4569999999999999999999999999999999954 23344444444433
No 7
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=2.1e-55 Score=394.59 Aligned_cols=278 Identities=39% Similarity=0.722 Sum_probs=241.9
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc------chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~ 211 (468)
+|...+.||+|.||.||+|++..+|+.||||+++..+ ...-||++.|+.++|+||+.|+++| .....+.
T Consensus 3 rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F-----~~~~~l~ 77 (318)
T KOG0659|consen 3 RYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVF-----PHKSNLS 77 (318)
T ss_pred hhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhc-----cCCCceE
Confidence 5888999999999999999999999999999996542 2345899999999999999999999 4444588
Q ss_pred EEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccC
Q 012233 212 LVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (468)
Q Consensus 212 lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~ 291 (468)
||+||++.++...++.. ...++...++.|+.++++||+|||. +.|+||||||.|+|+++++ .+||+|||+|+.+.
T Consensus 78 lVfEfm~tdLe~vIkd~---~i~l~pa~iK~y~~m~LkGl~y~H~-~~IlHRDlKPnNLLis~~g-~lKiADFGLAr~f~ 152 (318)
T KOG0659|consen 78 LVFEFMPTDLEVVIKDK---NIILSPADIKSYMLMTLKGLAYCHS-KWILHRDLKPNNLLISSDG-QLKIADFGLARFFG 152 (318)
T ss_pred EEEEeccccHHHHhccc---ccccCHHHHHHHHHHHHHHHHHHHh-hhhhcccCCccceEEcCCC-cEEeecccchhccC
Confidence 99999999888876653 4668889999999999999999998 9999999999999999999 89999999999885
Q ss_pred CCC-CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcC--
Q 012233 292 PGE-PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMN-- 368 (468)
Q Consensus 292 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~-- 368 (468)
+.. .....+.|.+|+|||.++|...|+..+||||.|||+.||+.|.+-|++.+..+++..|++.+|+|.++.|..+.
T Consensus 153 ~p~~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~l 232 (318)
T KOG0659|consen 153 SPNRIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSL 232 (318)
T ss_pred CCCcccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCcccccc
Confidence 443 33344789999999999999999999999999999999999999999999999999999999999999998765
Q ss_pred CCCccCC-CCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCCCC
Q 012233 369 PNYTEFK-FPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDP 429 (468)
Q Consensus 369 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~~~ 429 (468)
|.|.+++ +|. .+... +...++.++.||+.+||.+||.+|+++.|+|.|+||+..+.+
T Consensus 233 pdY~~~~~~P~---~~~~~-lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~P~p 290 (318)
T KOG0659|consen 233 PDYVKIQQFPK---PPLNN-LFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKSLPLP 290 (318)
T ss_pred ccHHHHhcCCC---Ccccc-ccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhcCCCC
Confidence 6666655 332 22222 345678899999999999999999999999999999985443
No 8
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.9e-55 Score=422.51 Aligned_cols=285 Identities=37% Similarity=0.615 Sum_probs=241.5
Q ss_pred CCCCcccceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc------chHHHHHHHHHHcCCCCcccccceeeecCC
Q 012233 131 GQPKQTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTE 204 (468)
Q Consensus 131 ~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 204 (468)
..+...+.|+.++.||+|.||.||+|++..+|+.||+|++..+. ...-+|+.||++|.||||++|.+.....
T Consensus 111 w~~r~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~-- 188 (560)
T KOG0600|consen 111 WGPRRADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSK-- 188 (560)
T ss_pred ccccchHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEec--
Confidence 34556678999999999999999999999999999999986543 2335899999999999999999988654
Q ss_pred CCceEEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeee
Q 012233 205 KDELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDF 284 (468)
Q Consensus 205 ~~~~~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DF 284 (468)
....+|||+|||..+|..++.. ..-.|++.+++.|+.||+.||+|||. +||+|||||.+|||||.++ .+||+||
T Consensus 189 -~~~siYlVFeYMdhDL~GLl~~---p~vkft~~qIKc~mkQLl~Gl~~cH~-~gvlHRDIK~SNiLidn~G-~LKiaDF 262 (560)
T KOG0600|consen 189 -LSGSIYLVFEYMDHDLSGLLSS---PGVKFTEPQIKCYMKQLLEGLEYCHS-RGVLHRDIKGSNILIDNNG-VLKIADF 262 (560)
T ss_pred -CCceEEEEEecccchhhhhhcC---CCcccChHHHHHHHHHHHHHHHHHhh-cCeeeccccccceEEcCCC-CEEeccc
Confidence 3345999999999987775542 34579999999999999999999997 9999999999999999998 8999999
Q ss_pred cCccccCCCC--CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHH
Q 012233 285 GSAKMLVPGE--PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTRE 362 (468)
Q Consensus 285 G~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~ 362 (468)
|+|+++.... ..+..+.|.+|+|||++.|...|+.++|+||.||||.||++|++.|++.+..+++.+|++.+|.|.+.
T Consensus 263 GLAr~y~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~ 342 (560)
T KOG0600|consen 263 GLARFYTPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTED 342 (560)
T ss_pred cceeeccCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChh
Confidence 9999775544 45677889999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHhhcC-CCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCC
Q 012233 363 EIKCMN-PNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFD 424 (468)
Q Consensus 363 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~ 424 (468)
.|.... |.+..++-...-.....+. ...++..+.+|+..||.+||.+|.||.++|.|+||.
T Consensus 343 ~W~~~kLP~~~~~kp~~~y~r~l~E~-~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~ 404 (560)
T KOG0600|consen 343 YWPVSKLPHATIFKPQQPYKRRLRET-FKDFPASALDLLEKLLSLDPDKRGTASSALQSEYFT 404 (560)
T ss_pred ccccccCCcccccCCCCcccchHHHH-hccCCHHHHHHHHHHhccCccccccHHHHhcCcccc
Confidence 876211 2223322222112222232 467899999999999999999999999999999994
No 9
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=5.9e-55 Score=402.82 Aligned_cols=286 Identities=34% Similarity=0.587 Sum_probs=250.7
Q ss_pred ccceEEeceecccCceEEEEEEEcCCCCEEEEEEeecccc------hHHHHHHHHHHcCCCCcccccceeeecCCCCceE
Q 012233 136 TISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKR------YKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELY 209 (468)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~~------~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~ 209 (468)
...|+....|++|+||.||+|+++.+++.||+|+++.+.. ...+|+.+|.+++|||||.+..+..... .+ -
T Consensus 75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~-~d--~ 151 (419)
T KOG0663|consen 75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSN-MD--K 151 (419)
T ss_pred HHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccc-cc--e
Confidence 3469999999999999999999999999999999865432 2258999999999999999988875543 33 3
Q ss_pred EEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccc
Q 012233 210 LNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (468)
Q Consensus 210 ~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~ 289 (468)
+|||||||..++..++.. +.+.|...+++.++.|+++||+|||. +.|+||||||+|+|++..| .+||+|||+|+.
T Consensus 152 iy~VMe~~EhDLksl~d~---m~q~F~~~evK~L~~QlL~glk~lH~-~wilHRDLK~SNLLm~~~G-~lKiaDFGLAR~ 226 (419)
T KOG0663|consen 152 IYIVMEYVEHDLKSLMET---MKQPFLPGEVKTLMLQLLRGLKHLHD-NWILHRDLKTSNLLLSHKG-ILKIADFGLARE 226 (419)
T ss_pred eeeeHHHHHhhHHHHHHh---ccCCCchHHHHHHHHHHHHHHHHHhh-ceeEecccchhheeeccCC-cEEecccchhhh
Confidence 889999999988876654 35789999999999999999999998 8999999999999999888 799999999998
Q ss_pred cCCC-CCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcC
Q 012233 290 LVPG-EPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMN 368 (468)
Q Consensus 290 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 368 (468)
+... .+.+..+.|.+|+|||++.+...|+.++|+||+|||+.||+++.+.|++.+..+++.+|++.+|+|++..|....
T Consensus 227 ygsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~ 306 (419)
T KOG0663|consen 227 YGSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYS 306 (419)
T ss_pred hcCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCcc
Confidence 8544 345567889999999999999999999999999999999999999999999999999999999999999887644
Q ss_pred --CCCccCCCCcccCCCcccccccC-CCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCCCC
Q 012233 369 --PNYTEFKFPQIKAHPWHKIFHKR-MPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDP 429 (468)
Q Consensus 369 --~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~~~ 429 (468)
+....+.|+..+...+...|... +++...+|+..+|.+||.+|+||.|+|.|+||.+.+.+
T Consensus 307 ~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~P~p 370 (419)
T KOG0663|consen 307 ELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRETPLP 370 (419)
T ss_pred ccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcccccccCCCC
Confidence 44445777777777777777665 78999999999999999999999999999999995543
No 10
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-54 Score=406.33 Aligned_cols=312 Identities=39% Similarity=0.670 Sum_probs=259.5
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeecc------cchHHHHHHHHHHcCCCCcccccceeeecCCCCceEEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~------~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~ 211 (468)
.|...+.||.|+||.|+.|.++.+|+.||||++... .....+|+++|+.++|+||+.+.+.+.......-.-+|
T Consensus 23 ~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvY 102 (359)
T KOG0660|consen 23 YYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVY 102 (359)
T ss_pred eecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeE
Confidence 366678999999999999999999999999988522 23335799999999999999999998663433444589
Q ss_pred EEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccC
Q 012233 212 LVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (468)
Q Consensus 212 lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~ 291 (468)
+|+|+|+.++..+++. ++.+....++.+++||++||+|+|+ .+|+||||||.|+|++.+. .+||||||+|+...
T Consensus 103 iV~elMetDL~~iik~----~~~L~d~H~q~f~YQiLrgLKyiHS-AnViHRDLKPsNll~n~~c-~lKI~DFGLAR~~~ 176 (359)
T KOG0660|consen 103 LVFELMETDLHQIIKS----QQDLTDDHAQYFLYQILRGLKYIHS-ANVIHRDLKPSNLLLNADC-DLKICDFGLARYLD 176 (359)
T ss_pred EehhHHhhHHHHHHHc----CccccHHHHHHHHHHHHHhcchhhc-ccccccccchhheeeccCC-CEEeccccceeecc
Confidence 9999998887776654 4558899999999999999999998 8999999999999999887 79999999999875
Q ss_pred C---CCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcC
Q 012233 292 P---GEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMN 368 (468)
Q Consensus 292 ~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 368 (468)
. ....+.++.|.+|+|||++.....|+.++||||+|||+.||++|++.|+|.+..+++..|...+|+|..+.+.+..
T Consensus 177 ~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~ 256 (359)
T KOG0660|consen 177 KFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIR 256 (359)
T ss_pred ccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhc
Confidence 3 3445677889999999999888889999999999999999999999999999999999999999999988877654
Q ss_pred CCC---ccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCCCCCCCCCCCCCCCccccc
Q 012233 369 PNY---TEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNTCLPNGRPLPTLFNF 445 (468)
Q Consensus 369 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~~~~~~~~~~~~~~~~~~~ 445 (468)
... --...|..+..+|...|+ .+++.+.||+.+||..||.+|+|++|+|.||||..+.+++.- |..++.+.. |
T Consensus 257 s~~ar~yi~slp~~p~~~f~~~fp-~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hdp~dE-P~~~~~~~~--~ 332 (359)
T KOG0660|consen 257 SEKARPYIKSLPQIPKQPFSSIFP-NANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHDPEDE-PVCQPIFDS--F 332 (359)
T ss_pred cHHHHHHHHhCCCCCCCCHHHHcC-CCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcCCccC-CCCCCCCcc--c
Confidence 111 123456677778877776 899999999999999999999999999999999999887765 333333333 2
Q ss_pred CHHHHhcCCHHHHHhccc
Q 012233 446 TAQELAGASNELRQRLIP 463 (468)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~ 463 (468)
. .. ...|.++.+|+
T Consensus 333 ~---~~-~~~~~~r~~i~ 346 (359)
T KOG0660|consen 333 E---HE-LTEEELRELIY 346 (359)
T ss_pred c---cc-ccHHHHHHHHH
Confidence 2 22 55566665554
No 11
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-54 Score=406.14 Aligned_cols=259 Identities=31% Similarity=0.515 Sum_probs=215.7
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeecc-----cchHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD-----KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNL 212 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~-----~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~l 212 (468)
+.+....||+|..|+||+++++.+++.+|+|++... .+...+|+++++.++||+||++|++|+.... .++|
T Consensus 80 dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~----~isI 155 (364)
T KOG0581|consen 80 DLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGE----EISI 155 (364)
T ss_pred HhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCc----eEEe
Confidence 466778899999999999999999999999999432 2344689999999999999999999976442 4889
Q ss_pred EeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCC
Q 012233 213 VLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP 292 (468)
Q Consensus 213 v~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~ 292 (468)
+||||++|.|+.+... .+.+++..+..++.+|++||.|||+.++||||||||+||||+..+ +|||||||.++.+..
T Consensus 156 ~mEYMDgGSLd~~~k~---~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskG-eVKicDFGVS~~lvn 231 (364)
T KOG0581|consen 156 CMEYMDGGSLDDILKR---VGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKG-EVKICDFGVSGILVN 231 (364)
T ss_pred ehhhcCCCCHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCC-CEEeccccccHHhhh
Confidence 9999998877654432 367999999999999999999999558999999999999999998 899999999998866
Q ss_pred CCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCC--CcHHHHHHHHHHhCCCCHHHHhhcCCC
Q 012233 293 GEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGE--SGVDQLVEIIKILGTPTREEIKCMNPN 370 (468)
Q Consensus 293 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~~ 370 (468)
. ...+++||..|||||.+.+.. |+.++||||||+.++|+.+|+.||... .....+..+..++..|++
T Consensus 232 S-~a~tfvGT~~YMsPERi~g~~-Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP--------- 300 (364)
T KOG0581|consen 232 S-IANTFVGTSAYMSPERISGES-YSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPP--------- 300 (364)
T ss_pred h-hcccccccccccChhhhcCCc-CCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCC---------
Confidence 6 567899999999999998765 999999999999999999999999874 222223322232222221
Q ss_pred CccCCCCcccCCCcccccccC-CCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCCCCCC
Q 012233 371 YTEFKFPQIKAHPWHKIFHKR-MPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNT 431 (468)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~-~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~~~~~ 431 (468)
. ++.. +|+++++||..||++||.+|+++.|+++|||+++...++.
T Consensus 301 -------~---------lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~~~~~v 346 (364)
T KOG0581|consen 301 -------R---------LPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQHPFIKKFEDPNV 346 (364)
T ss_pred -------C---------CCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcCHHHhhcccccc
Confidence 1 2333 7999999999999999999999999999999998766544
No 12
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=7.1e-54 Score=402.92 Aligned_cols=255 Identities=33% Similarity=0.524 Sum_probs=219.5
Q ss_pred CcccceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc-------chHHHHHHHHHHcCCCCcccccceeeecCCCC
Q 012233 134 KQTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKD 206 (468)
Q Consensus 134 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 206 (468)
....+|++.++||+|+||+||+++.+.+++.||+|++.+.. .....|..||..++||+||+++..| ++
T Consensus 22 ~~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysF-----Qt 96 (357)
T KOG0598|consen 22 VGPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSF-----QT 96 (357)
T ss_pred CChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEec-----cc
Confidence 34457999999999999999999999999999999986543 3445799999999999999999888 66
Q ss_pred ceEEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecC
Q 012233 207 ELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGS 286 (468)
Q Consensus 207 ~~~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~ 286 (468)
...+|+|+||+.||-|.. +. ...+.|++..++.|+..|+.||.|||+ +|||||||||+|||||.+|| ++|+|||+
T Consensus 97 ~~kLylVld~~~GGeLf~--hL-~~eg~F~E~~arfYlaEi~lAL~~LH~-~gIiyRDlKPENILLd~~GH-i~LtDFgL 171 (357)
T KOG0598|consen 97 EEKLYLVLDYLNGGELFY--HL-QREGRFSEDRARFYLAEIVLALGYLHS-KGIIYRDLKPENILLDEQGH-IKLTDFGL 171 (357)
T ss_pred CCeEEEEEeccCCccHHH--HH-HhcCCcchhHHHHHHHHHHHHHHHHHh-CCeeeccCCHHHeeecCCCc-EEEecccc
Confidence 777999999999874432 22 225779999999999999999999998 99999999999999999995 99999999
Q ss_pred cccc-CCCCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHh
Q 012233 287 AKML-VPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIK 365 (468)
Q Consensus 287 a~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 365 (468)
++.. ..+....++|||+.|||||++.+.+ |+.++|+||||+++|||++|.+||.+.+....+.+|.+.-
T Consensus 172 ~k~~~~~~~~t~tfcGT~eYmAPEil~~~g-y~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k--------- 241 (357)
T KOG0598|consen 172 CKEDLKDGDATRTFCGTPEYMAPEILLGKG-YDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGK--------- 241 (357)
T ss_pred chhcccCCCccccccCCccccChHHHhcCC-CCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCc---------
Confidence 9855 3445666789999999999998765 9999999999999999999999999999888888887621
Q ss_pred hcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCC----CHHHHhCCCCCCCCC
Q 012233 366 CMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRC----TALEACAHPFFDDLR 427 (468)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~----s~~ell~hp~f~~~~ 427 (468)
. ...+.-++.++++||+++|..||++|. .+.++.+||||+++.
T Consensus 242 --------~-----------~~~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~in 288 (357)
T KOG0598|consen 242 --------L-----------PLPPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKGIN 288 (357)
T ss_pred --------C-----------CCCCccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCcccccCC
Confidence 0 012234899999999999999999996 688999999999864
No 13
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-53 Score=416.41 Aligned_cols=256 Identities=34% Similarity=0.600 Sum_probs=225.0
Q ss_pred CcccceEEeceecccCceEEEEEEEcCCCCEEEEEEeecc-------cchHHHHHHHHHHc-CCCCcccccceeeecCCC
Q 012233 134 KQTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD-------KRYKNRELQIMRLL-NHPNVVSLKHCFFSTTEK 205 (468)
Q Consensus 134 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~-------~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~ 205 (468)
+...+|..++.||.|+|++|++|+++.+++.||||++.+. ..+..+|..+|.+| .||.|++|+..| +
T Consensus 70 k~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TF-----Q 144 (604)
T KOG0592|consen 70 KTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTF-----Q 144 (604)
T ss_pred CChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEe-----e
Confidence 3445799999999999999999999999999999988443 34566899999999 799999999988 7
Q ss_pred CceEEEEEeeccc-chHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeee
Q 012233 206 DELYLNLVLEYIS-ETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDF 284 (468)
Q Consensus 206 ~~~~~~lv~e~~~-~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DF 284 (468)
|...+|+|+||++ |+++.++.++ +.|++..++.|+.||+.||+|||+ +|||||||||||||||.++ .+||+||
T Consensus 145 D~~sLYFvLe~A~nGdll~~i~K~----Gsfde~caR~YAAeIldAleylH~-~GIIHRDlKPENILLd~dm-hikITDF 218 (604)
T KOG0592|consen 145 DEESLYFVLEYAPNGDLLDLIKKY----GSFDETCARFYAAEILDALEYLHS-NGIIHRDLKPENILLDKDG-HIKITDF 218 (604)
T ss_pred cccceEEEEEecCCCcHHHHHHHh----CcchHHHHHHHHHHHHHHHHHHHh-cCceeccCChhheeEcCCC-cEEEeec
Confidence 7778999999998 5677766654 668999999999999999999998 9999999999999999999 5999999
Q ss_pred cCccccCCCCCC--------------ccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHH
Q 012233 285 GSAKMLVPGEPN--------------ISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLV 350 (468)
Q Consensus 285 G~a~~~~~~~~~--------------~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~ 350 (468)
|.|+.+.+.... .+++||..|++||++.... .++.+|+|+||||||+|+.|.+||.+.+..-.+.
T Consensus 219 GsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~-~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFq 297 (604)
T KOG0592|consen 219 GSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSP-AGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQ 297 (604)
T ss_pred cccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCC-CCcccchHHHHHHHHHHhcCCCCCccccHHHHHH
Confidence 999887543211 4589999999999997654 8999999999999999999999999999888888
Q ss_pred HHHHHhCCCCHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCCCCC
Q 012233 351 EIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPN 430 (468)
Q Consensus 351 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~~~~ 430 (468)
+|+.+ ++. |++..++.+.|||+++|..||.+|+|+.||.+||||.+|.-.+
T Consensus 298 kI~~l-----------------~y~------------fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~Vdw~n 348 (604)
T KOG0592|consen 298 KIQAL-----------------DYE------------FPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAHPFFEGVDWEN 348 (604)
T ss_pred HHHHh-----------------ccc------------CCCCCCHHHHHHHHHHHccCccccccHHHHhhCcccccCChhh
Confidence 88873 333 4467899999999999999999999999999999999987766
No 14
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-53 Score=387.67 Aligned_cols=252 Identities=30% Similarity=0.507 Sum_probs=222.0
Q ss_pred CcccceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc-------chHHHHHHHHHHcCCCCcccccceeeecCCCC
Q 012233 134 KQTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKD 206 (468)
Q Consensus 134 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 206 (468)
....+|...+.||.|+||+|.+++.+.+|..+|+|++.+.. ....+|..+|+.+.||+++++++.| .+
T Consensus 41 ~~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~-----~d 115 (355)
T KOG0616|consen 41 YSLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTF-----KD 115 (355)
T ss_pred cchhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEee-----cc
Confidence 44557999999999999999999999999999999986543 2335799999999999999999988 77
Q ss_pred ceEEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecC
Q 012233 207 ELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGS 286 (468)
Q Consensus 207 ~~~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~ 286 (468)
..++||||||++||-+- .+.+..++|++..++.|+.||+.||+|||+ ++|++|||||||||+|.+| .+||+|||+
T Consensus 116 ~~~lymvmeyv~GGElF---S~Lrk~~rF~e~~arFYAAeivlAleylH~-~~iiYRDLKPENiLlD~~G-~iKitDFGF 190 (355)
T KOG0616|consen 116 NSNLYMVMEYVPGGELF---SYLRKSGRFSEPHARFYAAEIVLALEYLHS-LDIIYRDLKPENLLLDQNG-HIKITDFGF 190 (355)
T ss_pred CCeEEEEEeccCCccHH---HHHHhcCCCCchhHHHHHHHHHHHHHHHHh-cCeeeccCChHHeeeccCC-cEEEEeccc
Confidence 88899999999987443 233446789999999999999999999998 8999999999999999999 599999999
Q ss_pred ccccCCCCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhh
Q 012233 287 AKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKC 366 (468)
Q Consensus 287 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 366 (468)
|+.+... ..+.||||.|+|||++...+ |+.++|+|||||++|||+.|.+||...+....+.+|++
T Consensus 191 AK~v~~r--T~TlCGTPeYLAPEii~sk~-ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~------------ 255 (355)
T KOG0616|consen 191 AKRVSGR--TWTLCGTPEYLAPEIIQSKG-YNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILE------------ 255 (355)
T ss_pred eEEecCc--EEEecCCccccChHHhhcCC-CCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHh------------
Confidence 9987543 67899999999999997655 99999999999999999999999999999999999988
Q ss_pred cCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCC-----CHHHHhCCCCCCCCC
Q 012233 367 MNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRC-----TALEACAHPFFDDLR 427 (468)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~-----s~~ell~hp~f~~~~ 427 (468)
..+.|| ..+++++++||+++|+.|-.+|. ...++.+||||+++.
T Consensus 256 -----~~v~fP------------~~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v~ 304 (355)
T KOG0616|consen 256 -----GKVKFP------------SYFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGVD 304 (355)
T ss_pred -----CcccCC------------cccCHHHHHHHHHHHhhhhHhhhcCcCCCccccccCccccccc
Confidence 344444 45899999999999999999994 577899999999853
No 15
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=2.7e-52 Score=407.42 Aligned_cols=272 Identities=30% Similarity=0.488 Sum_probs=226.4
Q ss_pred cccceEEeceecccCceEEEEEEEcCCCCEEEEEEeecccch-------HHHHHHHHHHcCCCCcccccceeeecCCCCc
Q 012233 135 QTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRY-------KNRELQIMRLLNHPNVVSLKHCFFSTTEKDE 207 (468)
Q Consensus 135 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~~~-------~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 207 (468)
..++|.++.+||+|+||.||+|+-+.||..||+|++.+.... ...|..||....+|+||+||-.| ++.
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsF-----QD~ 213 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSF-----QDK 213 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEe-----cCC
Confidence 456899999999999999999999999999999999776543 34588899999999999999988 888
Q ss_pred eEEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCc
Q 012233 208 LYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSA 287 (468)
Q Consensus 208 ~~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a 287 (468)
.++||||||++||-..-+ ......+++..++.|+.+++.|++.||+ .|||||||||+|+|||..|| +||+|||++
T Consensus 214 ~~LYLiMEylPGGD~mTL---L~~~~~L~e~~arfYiaE~vlAI~~iH~-~gyIHRDIKPdNlLiD~~GH-iKLSDFGLs 288 (550)
T KOG0605|consen 214 EYLYLIMEYLPGGDMMTL---LMRKDTLTEDWARFYIAETVLAIESIHQ-LGYIHRDIKPDNLLIDAKGH-IKLSDFGLS 288 (550)
T ss_pred CeeEEEEEecCCccHHHH---HHhcCcCchHHHHHHHHHHHHHHHHHHH-cCcccccCChhheeecCCCC-Eeecccccc
Confidence 899999999997644322 2235779999999999999999999998 89999999999999999996 999999998
Q ss_pred cccCC-----------------------CCC-------------------------CccccccCCccccccccCCCCCCc
Q 012233 288 KMLVP-----------------------GEP-------------------------NISYICSRYYRAPELIFGATEYTT 319 (468)
Q Consensus 288 ~~~~~-----------------------~~~-------------------------~~~~~gt~~y~aPE~~~~~~~~~~ 319 (468)
+-+.. +.. ....+|||.|||||++.+.. |+.
T Consensus 289 ~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kg-Y~~ 367 (550)
T KOG0605|consen 289 TGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKG-YGK 367 (550)
T ss_pred chhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCC-CCc
Confidence 43211 000 02468999999999998876 999
Q ss_pred chhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHH
Q 012233 320 AIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDL 399 (468)
Q Consensus 320 ~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 399 (468)
.+|+||||||+||||.|.+||.+.++.+.+.+|+... ..+.||. ...++++++||
T Consensus 368 ~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr---------------~~l~fP~----------~~~~s~eA~DL 422 (550)
T KOG0605|consen 368 ECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWR---------------ETLKFPE----------EVDLSDEAKDL 422 (550)
T ss_pred cccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh---------------hhccCCC----------cCcccHHHHHH
Confidence 9999999999999999999999999999999988731 1233332 13477999999
Q ss_pred HHHhcccCCCCCCC---HHHHhCCCCCCCCCCCCCCCCCCCCCCccc
Q 012233 400 VSRLLQYSPSLRCT---ALEACAHPFFDDLRDPNTCLPNGRPLPTLF 443 (468)
Q Consensus 400 i~~~L~~dP~~R~s---~~ell~hp~f~~~~~~~~~~~~~~~~~~~~ 443 (468)
|.+||. ||.+|+. ++||..||||+.|.=....-...+=+|.+.
T Consensus 423 I~rll~-d~~~RLG~~G~~EIK~HPfF~~v~W~~l~~~~apfvP~v~ 468 (550)
T KOG0605|consen 423 ITRLLC-DPENRLGSKGAEEIKKHPFFKGVDWDHLREMPAPFVPQVN 468 (550)
T ss_pred HHHHhc-CHHHhcCcccHHHHhcCCccccCCcchhhcCCCCCCCCCC
Confidence 999999 9999984 899999999999876666555544466653
No 16
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=2.2e-51 Score=385.90 Aligned_cols=293 Identities=34% Similarity=0.686 Sum_probs=245.5
Q ss_pred cceEEeceecccCceEEEEEEEcCCCCEEEEEEeecccc------hHHHHHHHHHHcCCCC-cccccceeeecCC-CCce
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKR------YKNRELQIMRLLNHPN-VVSLKHCFFSTTE-KDEL 208 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~~------~~~~E~~il~~l~hpn-Iv~l~~~~~~~~~-~~~~ 208 (468)
..|...+.||+|+||+||+|+.+.+|+.||+|++..+.. ...+|+.+|+.|+|+| ||+|++++..... ....
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~ 90 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIG 90 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccc
Confidence 358888889999999999999999999999999865433 2368999999999999 9999999865442 2233
Q ss_pred EEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCcc
Q 012233 209 YLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAK 288 (468)
Q Consensus 209 ~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~ 288 (468)
.+++||||+.-++...+.......+.++...++.+++||+.||+|||+ +||+||||||+||||++++ .+||+|||+|+
T Consensus 91 ~l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~-~~IlHRDLKPQNlLi~~~G-~lKlaDFGlAr 168 (323)
T KOG0594|consen 91 KLYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHS-HGILHRDLKPQNLLISSSG-VLKLADFGLAR 168 (323)
T ss_pred eEEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHh-CCeecccCCcceEEECCCC-cEeeeccchHH
Confidence 688999999988887766655433578888999999999999999998 9999999999999999988 89999999998
Q ss_pred ccC-CCCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhc
Q 012233 289 MLV-PGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCM 367 (468)
Q Consensus 289 ~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 367 (468)
... +.......++|.+|+|||++.+...|+..+||||+|||++||+++++.|++.+..+++..|++.+|+|....|...
T Consensus 169 a~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v 248 (323)
T KOG0594|consen 169 AFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGV 248 (323)
T ss_pred HhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCc
Confidence 775 4445667889999999999999988999999999999999999999999999999999999999999999888754
Q ss_pred C--CCCccCCCCccc-CCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCCCCCCCC
Q 012233 368 N--PNYTEFKFPQIK-AHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNTCL 433 (468)
Q Consensus 368 ~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~~~~~~~ 433 (468)
. +.|.. .|+... ...+.... +..+++..+++.+||+++|.+|.|+..+|.||||.++.......
T Consensus 249 ~~~~~~k~-~f~~~~~~~~l~~~~-~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~~~~~~~~ 315 (323)
T KOG0594|consen 249 SSLPDYKA-PFPKWPGPKDLSSIL-PKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSELPEKSSQL 315 (323)
T ss_pred cccccccc-cCcCCCCccchHHhc-cccCccHHHHHHHHhccCcccCcCHHHHhcChhhcccccchhhh
Confidence 3 33332 333333 22333322 34457999999999999999999999999999999987765543
No 17
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=5.6e-51 Score=408.39 Aligned_cols=280 Identities=37% Similarity=0.624 Sum_probs=231.5
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeecccchHH---HHHHHHHHcC-C-----CCcccccceeeecCCCCce
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRYKN---RELQIMRLLN-H-----PNVVSLKHCFFSTTEKDEL 208 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~~~~~---~E~~il~~l~-h-----pnIv~l~~~~~~~~~~~~~ 208 (468)
+|.+.++||+|+||+|.+|.+..+++.||||+++....+.. .|+.||..|+ | -|||+++++| ....
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F-----~fr~ 261 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYF-----YFRN 261 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecc-----cccc
Confidence 68999999999999999999999999999999988877665 5889999987 3 4899999999 4455
Q ss_pred EEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeec-CCCCcEEEeeecCc
Q 012233 209 YLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVN-PHTHQLKICDFGSA 287 (468)
Q Consensus 209 ~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~-~~~~~vkL~DFG~a 287 (468)
++|||+|.++..|+++++... ..++++..++.++.||+.||.+||+ .||||+|||||||||. .....|||+|||.|
T Consensus 262 HlciVfELL~~NLYellK~n~--f~Glsl~~ir~~~~Qil~~L~~L~~-l~IIHcDLKPENILL~~~~r~~vKVIDFGSS 338 (586)
T KOG0667|consen 262 HLCIVFELLSTNLYELLKNNK--FRGLSLPLVRKFAQQILTALLFLHE-LGIIHCDLKPENILLKDPKRSRIKVIDFGSS 338 (586)
T ss_pred ceeeeehhhhhhHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHh-CCeeeccCChhheeeccCCcCceeEEecccc
Confidence 699999999999999887643 4569999999999999999999998 8999999999999984 33447999999999
Q ss_pred cccCCCCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhc
Q 012233 288 KMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCM 367 (468)
Q Consensus 288 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 367 (468)
+.... ...+++.+..|+|||++.|.+ |+.+.||||||||++||++|.+.|++.+..+++..|++.+|.|+...+...
T Consensus 339 c~~~q--~vytYiQSRfYRAPEVILGlp-Y~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~ 415 (586)
T KOG0667|consen 339 CFESQ--RVYTYIQSRFYRAPEVILGLP-YDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTA 415 (586)
T ss_pred cccCC--cceeeeeccccccchhhccCC-CCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhc
Confidence 87543 334889999999999999876 999999999999999999999999999999999999999999998776543
Q ss_pred CCCCccCCC----Cc-----------------------------c-cCCCcccccccCCCHHHHHHHHHhcccCCCCCCC
Q 012233 368 NPNYTEFKF----PQ-----------------------------I-KAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCT 413 (468)
Q Consensus 368 ~~~~~~~~~----~~-----------------------------~-~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s 413 (468)
.....-+.- +. . ....|...+...-...+.|||++||.+||.+|+|
T Consensus 416 ~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~t 495 (586)
T KOG0667|consen 416 KKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERIT 495 (586)
T ss_pred cccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCC
Confidence 322111111 00 0 1111222222233356899999999999999999
Q ss_pred HHHHhCCCCCCCCCC
Q 012233 414 ALEACAHPFFDDLRD 428 (468)
Q Consensus 414 ~~ell~hp~f~~~~~ 428 (468)
+.++|+||||.....
T Consensus 496 p~qal~Hpfl~~~~~ 510 (586)
T KOG0667|consen 496 PAQALNHPFLTGTSL 510 (586)
T ss_pred HHHHhcCcccccccc
Confidence 999999999996443
No 18
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-51 Score=389.47 Aligned_cols=256 Identities=33% Similarity=0.544 Sum_probs=218.3
Q ss_pred ccceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc------chHHHHHHHHHHcCCCCcccccceeeecCCCCceE
Q 012233 136 TISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELY 209 (468)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~ 209 (468)
..+|.+.+.||.|+||+||+|+.+.++..||||.+.+.. ..+..|+.||+.++|||||+|++++ ....+
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~-----~~~~~ 83 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCI-----EDDDF 83 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEE-----ecCCe
Confidence 446999999999999999999999999999999986552 3345799999999999999999999 55557
Q ss_pred EEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCC-C----CcEEEeee
Q 012233 210 LNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPH-T----HQLKICDF 284 (468)
Q Consensus 210 ~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~-~----~~vkL~DF 284 (468)
+|||||||.||.|.. +.+..+.+++..++.++.||+.||++||+ ++||||||||+||||+.. + -.+||+||
T Consensus 84 i~lVMEyC~gGDLs~---yi~~~~~l~e~t~r~Fm~QLA~alq~L~~-~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADF 159 (429)
T KOG0595|consen 84 IYLVMEYCNGGDLSD---YIRRRGRLPEATARHFMQQLASALQFLHE-NNIIHRDLKPQNILLSTTARNDTSPVLKIADF 159 (429)
T ss_pred EEEEEEeCCCCCHHH---HHHHcCCCCHHHHHHHHHHHHHHHHHHHH-CCeeeccCCcceEEeccCCCCCCCceEEeccc
Confidence 999999999775542 33345689999999999999999999998 999999999999999764 2 25899999
Q ss_pred cCccccCCCCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHH
Q 012233 285 GSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEI 364 (468)
Q Consensus 285 G~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 364 (468)
|+|+.+.++....+.||+|.|||||++.. ..|+.|+|+||+|+|+|+|++|++||...+..+.+..+.+.-.
T Consensus 160 GfAR~L~~~~~a~tlcGSplYMAPEV~~~-~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~------- 231 (429)
T KOG0595|consen 160 GFARFLQPGSMAETLCGSPLYMAPEVIMS-QQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNE------- 231 (429)
T ss_pred chhhhCCchhHHHHhhCCccccCHHHHHh-ccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcccc-------
Confidence 99999998888889999999999999964 4599999999999999999999999999988887775443211
Q ss_pred hhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCC
Q 012233 365 KCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLR 427 (468)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~ 427 (468)
....++..++..+.+|+..+|+.+|..|.+..+-+.|+++..-.
T Consensus 232 -------------------~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~~~l~~~p 275 (429)
T KOG0595|consen 232 -------------------IVPVLPAELSNPLRELLISLLQRNPKDRISFEDFFDHPFLAANP 275 (429)
T ss_pred -------------------ccCchhhhccCchhhhhhHHHhcCccccCchHHhhhhhhcccCc
Confidence 11123445777888999999999999999999999999997633
No 19
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=6.7e-51 Score=386.08 Aligned_cols=276 Identities=27% Similarity=0.424 Sum_probs=232.5
Q ss_pred cccceEEeceecccCceEEEEEEEcCCCCEEEEEEeecccch-------HHHHHHHHHHcCCCCcccccceeeecCCCCc
Q 012233 135 QTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRY-------KNRELQIMRLLNHPNVVSLKHCFFSTTEKDE 207 (468)
Q Consensus 135 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~~~-------~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 207 (468)
....|++.+.||.|..|+||+|....++..+|+|++.+.... ...|.+||+.++||.++.||..| +..
T Consensus 75 ~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~f-----et~ 149 (459)
T KOG0610|consen 75 GLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASF-----ETD 149 (459)
T ss_pred CHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhhee-----ecc
Confidence 344699999999999999999999999999999999654322 23599999999999999999999 777
Q ss_pred eEEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCc
Q 012233 208 LYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSA 287 (468)
Q Consensus 208 ~~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a 287 (468)
.+.|+|||||+||.+..+++ ....+.|++..++.|+..++.||+|||. .|||+||||||||||..+|| |.|+||.++
T Consensus 150 ~~~cl~meyCpGGdL~~Lrq-kQp~~~fse~~aRFYaAEvl~ALEYLHm-lGivYRDLKPENILvredGH-IMLsDFDLS 226 (459)
T KOG0610|consen 150 KYSCLVMEYCPGGDLHSLRQ-KQPGKRFSESAARFYAAEVLLALEYLHM-LGIVYRDLKPENILVREDGH-IMLSDFDLS 226 (459)
T ss_pred ceeEEEEecCCCccHHHHHh-hCCCCccchhhHHHHHHHHHHHHHHHHh-hceeeccCCcceeEEecCCc-EEeeecccc
Confidence 78999999999887766654 4457789999999999999999999996 89999999999999999996 999999987
Q ss_pred cccCC-----------------------------------C----------------------CCCccccccCCcccccc
Q 012233 288 KMLVP-----------------------------------G----------------------EPNISYICSRYYRAPEL 310 (468)
Q Consensus 288 ~~~~~-----------------------------------~----------------------~~~~~~~gt~~y~aPE~ 310 (468)
..... . .....++||-.|+|||+
T Consensus 227 ~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEv 306 (459)
T KOG0610|consen 227 LRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEV 306 (459)
T ss_pred ccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCcccccccccccccccee
Confidence 32200 0 01135788999999999
Q ss_pred ccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCCccCCCCcccCCCccccccc
Q 012233 311 IFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHK 390 (468)
Q Consensus 311 ~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (468)
+.|.. .+.++|+|+|||++||||.|.+||.+.+..+.+.+|+. .+..||.. +
T Consensus 307 I~G~G-HgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~-----------------~~l~Fp~~----------~ 358 (459)
T KOG0610|consen 307 IRGEG-HGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVG-----------------QPLKFPEE----------P 358 (459)
T ss_pred eecCC-CCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhc-----------------CCCcCCCC----------C
Confidence 98876 89999999999999999999999999999999999887 45566653 2
Q ss_pred CCCHHHHHHHHHhcccCCCCCCC----HHHHhCCCCCCCCCCCCCCCCCCCCCCcccccC
Q 012233 391 RMPPEALDLVSRLLQYSPSLRCT----ALEACAHPFFDDLRDPNTCLPNGRPLPTLFNFT 446 (468)
Q Consensus 391 ~~~~~l~~li~~~L~~dP~~R~s----~~ell~hp~f~~~~~~~~~~~~~~~~~~~~~~~ 446 (468)
.++..++|||+++|.+||.+|+. |.||.+||||+.|.=.-..-...+-+|......
T Consensus 359 ~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~gVnWaLir~~~PP~iP~~~d~~ 418 (459)
T KOG0610|consen 359 EVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRHPFFEGVNWALIRCARPPEIPKPVDGG 418 (459)
T ss_pred cchhHHHHHHHHHhccChhhhhccccchHHhhcCccccCCChhheeccCCCcCCCccccC
Confidence 47889999999999999999998 999999999999866544444444466666554
No 20
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.2e-51 Score=408.45 Aligned_cols=260 Identities=32% Similarity=0.492 Sum_probs=229.6
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeecc-------cchHHHHHHHHHHcCCCCcccccceeeecCCCCceEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD-------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYL 210 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~-------~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~ 210 (468)
-|++++.||.|+.|.|.+|++..||+.+|||++.+. ....++|+-||+.+.||||++||+++ ++..++
T Consensus 13 pwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVw-----e~~~~l 87 (786)
T KOG0588|consen 13 PWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVW-----ENKQHL 87 (786)
T ss_pred ceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeee-----ccCceE
Confidence 499999999999999999999999999999999776 45567899999999999999999999 666779
Q ss_pred EEEeecccch-HHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccc
Q 012233 211 NLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (468)
Q Consensus 211 ~lv~e~~~~~-ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~ 289 (468)
|+|.||++|| ++++ ...++.+++.++++++.||+.|+.|+|. .+|+||||||+|+|||.+. +|||+|||+|..
T Consensus 88 ylvlEyv~gGELFdy----lv~kG~l~e~eaa~ff~QIi~gv~yCH~-~~icHRDLKpENlLLd~~~-nIKIADFGMAsL 161 (786)
T KOG0588|consen 88 YLVLEYVPGGELFDY----LVRKGPLPEREAAHFFRQILDGVSYCHA-FNICHRDLKPENLLLDVKN-NIKIADFGMASL 161 (786)
T ss_pred EEEEEecCCchhHHH----HHhhCCCCCHHHHHHHHHHHHHHHHHhh-hcceeccCCchhhhhhccc-CEeeeccceeec
Confidence 9999999966 3333 3336889999999999999999999997 8999999999999999888 599999999998
Q ss_pred cCCCCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCC
Q 012233 290 LVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP 369 (468)
Q Consensus 290 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 369 (468)
-.++.-..+.||+|.|.|||++.|.+..+.++||||+|||||.||+|+.||.+.+....+.++.+
T Consensus 162 e~~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~--------------- 226 (786)
T KOG0588|consen 162 EVPGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQR--------------- 226 (786)
T ss_pred ccCCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHc---------------
Confidence 88888888999999999999999999889999999999999999999999998877777777765
Q ss_pred CCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCCCCCCCCCCCC
Q 012233 370 NYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNTCLPNGR 437 (468)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~~~~~~~~~~~ 437 (468)
..|. ++..++.++++||.+||..||++|+|.+|++.|||+............+.
T Consensus 227 --G~f~------------MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g~~~~~~~~~~~~ 280 (786)
T KOG0588|consen 227 --GVFE------------MPSNISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSGYTSLPSSKSLRP 280 (786)
T ss_pred --Cccc------------CCCcCCHHHHHHHHHHhccCccccccHHHHhhCchhhcCCCCChhhhcCC
Confidence 2333 33569999999999999999999999999999999998776555543333
No 21
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-50 Score=400.24 Aligned_cols=250 Identities=34% Similarity=0.517 Sum_probs=216.3
Q ss_pred ccceEEeceecccCceEEEEEEEcCCCCEEEEEEeecc---------cchHHHHHHHHHHcC-CCCcccccceeeecCCC
Q 012233 136 TISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD---------KRYKNRELQIMRLLN-HPNVVSLKHCFFSTTEK 205 (468)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~---------~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~ 205 (468)
...|.+++.||+|+||+|+.|.+..+|..||+|++.+. .....+|+.+++.+. ||||++++.++..
T Consensus 16 ~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t---- 91 (370)
T KOG0583|consen 16 IGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFAT---- 91 (370)
T ss_pred cCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEec----
Confidence 44699999999999999999999999999999976443 223457999999999 9999999999944
Q ss_pred CceEEEEEeecccc-hHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCC-CCcEEEee
Q 012233 206 DELYLNLVLEYISE-TVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPH-THQLKICD 283 (468)
Q Consensus 206 ~~~~~~lv~e~~~~-~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~-~~~vkL~D 283 (468)
...+|+|||||.| .+++.+.. ...+.+..++.++.||+.|++|||+ +||+||||||+|||++.+ + ++||+|
T Consensus 92 -~~~~~ivmEy~~gGdL~~~i~~----~g~l~E~~ar~~F~Qlisav~y~H~-~gi~HRDLK~ENilld~~~~-~~Kl~D 164 (370)
T KOG0583|consen 92 -PTKIYIVMEYCSGGDLFDYIVN----KGRLKEDEARKYFRQLISAVAYCHS-RGIVHRDLKPENILLDGNEG-NLKLSD 164 (370)
T ss_pred -CCeEEEEEEecCCccHHHHHHH----cCCCChHHHHHHHHHHHHHHHHHHh-CCEeeCCCCHHHEEecCCCC-CEEEec
Confidence 3349999999997 55554433 5778889999999999999999998 999999999999999988 6 899999
Q ss_pred ecCcccc-CCCCCCccccccCCccccccccCCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCH
Q 012233 284 FGSAKML-VPGEPNISYICSRYYRAPELIFGAT-EYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTR 361 (468)
Q Consensus 284 FG~a~~~-~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~ 361 (468)
||++... ..+....+.+||+.|+|||++.+.. .-+.++||||+||+||.|++|+.||...+....+.+|.+
T Consensus 165 FG~s~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~------- 237 (370)
T KOG0583|consen 165 FGLSAISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRK------- 237 (370)
T ss_pred cccccccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhc-------
Confidence 9999887 4666778899999999999998766 446899999999999999999999999877777777655
Q ss_pred HHHhhcCCCCccCCCCcccCCCcccccccCC-CHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCC
Q 012233 362 EEIKCMNPNYTEFKFPQIKAHPWHKIFHKRM-PPEALDLVSRLLQYSPSLRCTALEACAHPFFDD 425 (468)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~ 425 (468)
..+.+| ..+ ++++++||.+||..||.+|+|+.+++.||||+.
T Consensus 238 ----------~~~~~p------------~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~ 280 (370)
T KOG0583|consen 238 ----------GEFKIP------------SYLLSPEARSLIEKMLVPDPSTRITLLEILEHPWFQK 280 (370)
T ss_pred ----------CCccCC------------CCcCCHHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence 334433 346 999999999999999999999999999999997
No 22
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.2e-51 Score=407.72 Aligned_cols=254 Identities=30% Similarity=0.517 Sum_probs=221.8
Q ss_pred CCcccceEEeceecccCceEEEEEEEcCCCCEEEEEEeecccc-------hHHHHHHHHHHcC-CCCcccccceeeecCC
Q 012233 133 PKQTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKR-------YKNRELQIMRLLN-HPNVVSLKHCFFSTTE 204 (468)
Q Consensus 133 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~~-------~~~~E~~il~~l~-hpnIv~l~~~~~~~~~ 204 (468)
+....+|++.++||+|+||+|+++..+.+++.||||+++++.. ....|..|+.... ||.++.|+.+|
T Consensus 364 ~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~f----- 438 (694)
T KOG0694|consen 364 PLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCF----- 438 (694)
T ss_pred cccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeeccccc-----
Confidence 4455689999999999999999999999999999999877542 3346888888776 99999999999
Q ss_pred CCceEEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeee
Q 012233 205 KDELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDF 284 (468)
Q Consensus 205 ~~~~~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DF 284 (468)
+...++|+||||+.||.+. + ......|++..++.|+..|+.||.|||+ +||||||||.+|||||.+|+ +||+||
T Consensus 439 QT~~~l~fvmey~~Ggdm~---~-~~~~~~F~e~rarfyaAev~l~L~fLH~-~~IIYRDlKLdNiLLD~eGh-~kiADF 512 (694)
T KOG0694|consen 439 QTKEHLFFVMEYVAGGDLM---H-HIHTDVFSEPRARFYAAEVVLGLQFLHE-NGIIYRDLKLDNLLLDTEGH-VKIADF 512 (694)
T ss_pred ccCCeEEEEEEecCCCcEE---E-EEecccccHHHHHHHHHHHHHHHHHHHh-cCceeeecchhheEEcccCc-EEeccc
Confidence 6667799999999988522 2 2235779999999999999999999998 99999999999999999995 999999
Q ss_pred cCccccC-CCCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHH
Q 012233 285 GSAKMLV-PGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREE 363 (468)
Q Consensus 285 G~a~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~ 363 (468)
|+++... .+....++||||.|||||++.+.. |+.++|+|||||+|||||.|+.||++++..+....|+.
T Consensus 513 GlcKe~m~~g~~TsTfCGTpey~aPEil~e~~-Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~--------- 582 (694)
T KOG0694|consen 513 GLCKEGMGQGDRTSTFCGTPEFLAPEVLTEQS-YTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVN--------- 582 (694)
T ss_pred ccccccCCCCCccccccCChhhcChhhhccCc-ccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhc---------
Confidence 9998765 555677899999999999998765 99999999999999999999999999998888888876
Q ss_pred HhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCC-----HHHHhCCCCCCCCC
Q 012233 364 IKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCT-----ALEACAHPFFDDLR 427 (468)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s-----~~ell~hp~f~~~~ 427 (468)
.+.. ++..++.++.++++++|.+||++|.. +++|..||||+.|.
T Consensus 583 --------d~~~------------yP~~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i~ 631 (694)
T KOG0694|consen 583 --------DEVR------------YPRFLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSID 631 (694)
T ss_pred --------CCCC------------CCCcccHHHHHHHHHHhccCcccccCCCCCCchhhhhCCccccCC
Confidence 2333 34569999999999999999999985 58899999999976
No 23
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1e-51 Score=366.41 Aligned_cols=255 Identities=30% Similarity=0.441 Sum_probs=218.4
Q ss_pred cccceEEeceecccCceEEEEEEEcCCCCEEEEEEeec------ccchHHHHHHHHHHcCCCCcccccceeeecCCCCce
Q 012233 135 QTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQ------DKRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDEL 208 (468)
Q Consensus 135 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~------~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 208 (468)
..+.|.+.++||+|.|+.||++....+|+.+|+|++.. +...+++|+.|-+.|+|||||+|.+.+ ....
T Consensus 9 f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti-----~~~~ 83 (355)
T KOG0033|consen 9 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSI-----QEES 83 (355)
T ss_pred cchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhh-----cccc
Confidence 34569999999999999999999999999999997732 334567899999999999999999988 6777
Q ss_pred EEEEEeecccchHH-HHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCC--CCcEEEeeec
Q 012233 209 YLNLVLEYISETVY-RVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPH--THQLKICDFG 285 (468)
Q Consensus 209 ~~~lv~e~~~~~ll-~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~--~~~vkL~DFG 285 (468)
+.|||+|++.|+-+ ..+-.. ..+++..+-.++.||+.||.|+|. +||||||+||+|+|+-+. +.-+||+|||
T Consensus 84 ~~ylvFe~m~G~dl~~eIV~R----~~ySEa~aSH~~rQiLeal~yCH~-n~IvHRDvkP~nllLASK~~~A~vKL~~FG 158 (355)
T KOG0033|consen 84 FHYLVFDLVTGGELFEDIVAR----EFYSEADASHCIQQILEALAYCHS-NGIVHRDLKPENLLLASKAKGAAVKLADFG 158 (355)
T ss_pred eeEEEEecccchHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHh-cCceeccCChhheeeeeccCCCceeecccc
Confidence 89999999997633 222211 335777788999999999999997 999999999999999433 3369999999
Q ss_pred CccccCCCCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHh
Q 012233 286 SAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIK 365 (468)
Q Consensus 286 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 365 (468)
+|..+..+....+++|||.|||||++...+ |+..+|||+.|||||-||.|++||.+.+..+.+..|++.
T Consensus 159 vAi~l~~g~~~~G~~GtP~fmaPEvvrkdp-y~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g---------- 227 (355)
T KOG0033|consen 159 LAIEVNDGEAWHGFAGTPGYLSPEVLKKDP-YSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAG---------- 227 (355)
T ss_pred eEEEeCCccccccccCCCcccCHHHhhcCC-CCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhcc----------
Confidence 999988777777889999999999997655 999999999999999999999999999999999988873
Q ss_pred hcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCC
Q 012233 366 CMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDD 425 (468)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~ 425 (468)
.+.++. ..|+.+++++++||++||..||.+|+|+.|+|+|||+.+
T Consensus 228 -------~yd~~~--------~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~ 272 (355)
T KOG0033|consen 228 -------AYDYPS--------PEWDTVTPEAKSLIRRMLTVNPKKRITADEALKHPWICN 272 (355)
T ss_pred -------ccCCCC--------cccCcCCHHHHHHHHHHhccChhhhccHHHHhCCchhcc
Confidence 333332 245779999999999999999999999999999999976
No 24
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9e-52 Score=373.63 Aligned_cols=254 Identities=30% Similarity=0.521 Sum_probs=211.7
Q ss_pred cceEEeceecccCceEEEEEEEcCCCCEEEEEEeecc------cchHHHHHHHHHHcCCCCcccccceeeecCCCCceEE
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYL 210 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~------~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~ 210 (468)
..|+++++||.|+||.||++.+..+|..||.|.+.-+ +...-.|+.+|++|+|||||+++++-+. ++..-+
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~---~~~evl 95 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFI---EDNEVL 95 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhh---ccchhh
Confidence 3699999999999999999999999999999988532 2334469999999999999999984332 233348
Q ss_pred EEEeeccc-chHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHh--cC-CccccCCCCCCeeecCCCCcEEEeeecC
Q 012233 211 NLVLEYIS-ETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHH--VV-GVCHRDIKPQNLLVNPHTHQLKICDFGS 286 (468)
Q Consensus 211 ~lv~e~~~-~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~--~~-givHrDlkp~NILl~~~~~~vkL~DFG~ 286 (468)
+||||||. |++-..++++....+.+++..+|+++.|+|.||..+|+ .+ -|+||||||.||+|+.+| .+||+|||+
T Consensus 96 nivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~g-vvKLGDfGL 174 (375)
T KOG0591|consen 96 NIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANG-VVKLGDFGL 174 (375)
T ss_pred HHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCC-ceeeccchh
Confidence 89999998 67778899999999999999999999999999999996 22 288999999999999998 899999999
Q ss_pred ccccCCCCC-CccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHh
Q 012233 287 AKMLVPGEP-NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIK 365 (468)
Q Consensus 287 a~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 365 (468)
++.+..... ..+.+|||+||+||.+.+.+ |+.++||||+||++|||+.-++||.+.+-.+...+|.++ ..|+
T Consensus 175 ~r~l~s~~tfA~S~VGTPyYMSPE~i~~~~-Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qg-d~~~----- 247 (375)
T KOG0591|consen 175 GRFLSSKTTFAHSLVGTPYYMSPERIHESG-YNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQG-DYPP----- 247 (375)
T ss_pred HhHhcchhHHHHhhcCCCcccCHHHHhcCC-CCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcC-CCCC-----
Confidence 998855442 34689999999999998765 999999999999999999999999999666666666553 1111
Q ss_pred hcCCCCccCCCCcccCCCcccccc-cCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCCC
Q 012233 366 CMNPNYTEFKFPQIKAHPWHKIFH-KRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRD 428 (468)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~~ 428 (468)
+| ..+|.++..||..|+..||..||+. +|++.++..
T Consensus 248 ----------------------~p~~~YS~~l~~li~~ci~vd~~~RP~t-----~~~v~di~~ 284 (375)
T KOG0591|consen 248 ----------------------LPDEHYSTDLRELINMCIAVDPEQRPDT-----VPYVQDIQS 284 (375)
T ss_pred ----------------------CcHHHhhhHHHHHHHHHccCCcccCCCc-----chHHHHHHH
Confidence 11 4478999999999999999999986 555555443
No 25
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-50 Score=385.02 Aligned_cols=259 Identities=30% Similarity=0.455 Sum_probs=218.7
Q ss_pred CCCcccceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc------------------chHHHHHHHHHHcCCCCcc
Q 012233 132 QPKQTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------------------RYKNRELQIMRLLNHPNVV 193 (468)
Q Consensus 132 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~------------------~~~~~E~~il~~l~hpnIv 193 (468)
..++.++|.+++.||+|.||.|-+|++..+++.||||++.+.+ ....+|+.||++|.|||||
T Consensus 92 ~~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV 171 (576)
T KOG0585|consen 92 DRKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVV 171 (576)
T ss_pred cceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCee
Confidence 3456678999999999999999999999999999999985432 1335799999999999999
Q ss_pred cccceeeecCCCCceEEEEEeecccchHHHHHhhhhhcCCC-CCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeee
Q 012233 194 SLKHCFFSTTEKDELYLNLVLEYISETVYRVSKHYTRMNQH-VPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLV 272 (468)
Q Consensus 194 ~l~~~~~~~~~~~~~~~~lv~e~~~~~ll~~~~~~~~~~~~-~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl 272 (468)
+|+.+..... ...+|||+|||..|-+. +...... +.+.+++.|+++++.||+|||. +|||||||||.|+||
T Consensus 172 ~LiEvLDDP~---s~~~YlVley~s~G~v~----w~p~d~~els~~~Ar~ylrDvv~GLEYLH~-QgiiHRDIKPsNLLl 243 (576)
T KOG0585|consen 172 KLIEVLDDPE---SDKLYLVLEYCSKGEVK----WCPPDKPELSEQQARKYLRDVVLGLEYLHY-QGIIHRDIKPSNLLL 243 (576)
T ss_pred EEEEeecCcc---cCceEEEEEeccCCccc----cCCCCcccccHHHHHHHHHHHHHHHHHHHh-cCeeccccchhheEE
Confidence 9999884433 34699999999977443 2333444 8999999999999999999997 999999999999999
Q ss_pred cCCCCcEEEeeecCccccCCCC------CCccccccCCccccccccCC---CCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 012233 273 NPHTHQLKICDFGSAKMLVPGE------PNISYICSRYYRAPELIFGA---TEYTTAIDMWSIGCVLAELLLGQPLFPGE 343 (468)
Q Consensus 273 ~~~~~~vkL~DFG~a~~~~~~~------~~~~~~gt~~y~aPE~~~~~---~~~~~~~DvwSlG~il~ell~G~~pf~~~ 343 (468)
+.++ .|||+|||.+.....+. .....+|||.|+|||.+.+. ...+.+.||||+||+||.|+.|+.||-+.
T Consensus 244 ~~~g-~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~ 322 (576)
T KOG0585|consen 244 SSDG-TVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDD 322 (576)
T ss_pred cCCC-cEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccc
Confidence 9998 79999999997663221 22347899999999999763 33577999999999999999999999999
Q ss_pred CcHHHHHHHHHHhCCCCHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCC
Q 012233 344 SGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (468)
Q Consensus 344 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f 423 (468)
...+.+.+|++ ..+.||.. +.+.++++|||++||.+||.+|+++.++..|||.
T Consensus 323 ~~~~l~~KIvn-----------------~pL~fP~~----------pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwv 375 (576)
T KOG0585|consen 323 FELELFDKIVN-----------------DPLEFPEN----------PEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWV 375 (576)
T ss_pred hHHHHHHHHhc-----------------CcccCCCc----------ccccHHHHHHHHHHhhcChhheeehhhheeccee
Confidence 99999999887 45556542 2478899999999999999999999999999999
Q ss_pred CCC
Q 012233 424 DDL 426 (468)
Q Consensus 424 ~~~ 426 (468)
..-
T Consensus 376 t~~ 378 (576)
T KOG0585|consen 376 TRD 378 (576)
T ss_pred ccC
Confidence 763
No 26
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=1.4e-48 Score=379.11 Aligned_cols=277 Identities=32% Similarity=0.630 Sum_probs=229.2
Q ss_pred ccceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc-----chHHHHHHHHHHcCCCCcccccceeeecCCCCceEE
Q 012233 136 TISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYL 210 (468)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~ 210 (468)
..+|.+.+.||.|+||.||+|.+..++..||+|++.... ....+|+.+++.++||||+++++++ ....+.
T Consensus 4 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-----~~~~~~ 78 (288)
T cd07871 4 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDII-----HTERCL 78 (288)
T ss_pred cccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEE-----cCCCeE
Confidence 346999999999999999999999999999999885321 2345799999999999999999988 445568
Q ss_pred EEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCcccc
Q 012233 211 NLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (468)
Q Consensus 211 ~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~ 290 (468)
++||||+.+++...+.. ....+++..++.++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||+++..
T Consensus 79 ~lv~e~~~~~l~~~l~~---~~~~~~~~~~~~~~~qi~~aL~~LH~-~~ivH~dlkp~Nil~~~~~-~~kl~DfG~~~~~ 153 (288)
T cd07871 79 TLVFEYLDSDLKQYLDN---CGNLMSMHNVKIFMFQLLRGLSYCHK-RKILHRDLKPQNLLINEKG-ELKLADFGLARAK 153 (288)
T ss_pred EEEEeCCCcCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCHHHEEECCCC-CEEECcCcceeec
Confidence 99999999877765432 23457888999999999999999998 8999999999999999888 7999999998764
Q ss_pred CCCC-CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcC-
Q 012233 291 VPGE-PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMN- 368 (468)
Q Consensus 291 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~- 368 (468)
.... ......+++.|+|||++.+...++.++|||||||++|+|++|++||.+.+..+.+..+...++.|..+.+....
T Consensus 154 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (288)
T cd07871 154 SVPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITS 233 (288)
T ss_pred cCCCccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhcccc
Confidence 3222 23345789999999998766668999999999999999999999999999889999999999998888776533
Q ss_pred -CCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCC
Q 012233 369 -PNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (468)
Q Consensus 369 -~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f 423 (468)
..+....++.....++.. ....+++++++||.+||++||.+|||++|+|+||||
T Consensus 234 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f 288 (288)
T cd07871 234 NEEFRSYLFPQYRAQPLIN-HAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF 288 (288)
T ss_pred chhhhccccCccCCCchHH-hCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence 233334444433333332 234678999999999999999999999999999998
No 27
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2e-49 Score=378.87 Aligned_cols=257 Identities=32% Similarity=0.507 Sum_probs=207.8
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeecc----cchHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD----KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLV 213 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~----~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv 213 (468)
+|...+.||+|+||.||++.+..+|..+|||.+... ...+.+|+.+|++++|||||++++....... ..++|.
T Consensus 18 ~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~---~~~~i~ 94 (313)
T KOG0198|consen 18 NWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSREN---DEYNIF 94 (313)
T ss_pred hhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccC---eeeEee
Confidence 588889999999999999999999999999988665 3446889999999999999999986432221 468899
Q ss_pred eecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecC-CCCcEEEeeecCccccCC
Q 012233 214 LEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNP-HTHQLKICDFGSAKMLVP 292 (468)
Q Consensus 214 ~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~-~~~~vkL~DFG~a~~~~~ 292 (468)
|||+++|.+..+.. +....+++..++.++.||+.||+|||+ +|||||||||+||||+. ++ .+||+|||+++....
T Consensus 95 mEy~~~GsL~~~~~--~~g~~l~E~~v~~ytr~iL~GL~ylHs-~g~vH~DiK~~NiLl~~~~~-~~KlaDFG~a~~~~~ 170 (313)
T KOG0198|consen 95 MEYAPGGSLSDLIK--RYGGKLPEPLVRRYTRQILEGLAYLHS-KGIVHCDIKPANILLDPSNG-DVKLADFGLAKKLES 170 (313)
T ss_pred eeccCCCcHHHHHH--HcCCCCCHHHHHHHHHHHHHHHHHHHh-CCEeccCcccceEEEeCCCC-eEEeccCcccccccc
Confidence 99999875553322 222269999999999999999999997 99999999999999998 56 799999999987653
Q ss_pred ----CCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCC-CcHHHHHHHHHHhCCCCHHHHhhc
Q 012233 293 ----GEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGE-SGVDQLVEIIKILGTPTREEIKCM 367 (468)
Q Consensus 293 ----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~ 367 (468)
........||+.|||||++........++|||||||++.||+||.+||... ...+.+..+.. ..
T Consensus 171 ~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~---~~-------- 239 (313)
T KOG0198|consen 171 KGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGR---ED-------- 239 (313)
T ss_pred ccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhc---cC--------
Confidence 223446789999999999975322345999999999999999999999873 33333333322 10
Q ss_pred CCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCCC
Q 012233 368 NPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRD 428 (468)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~~ 428 (468)
..| .++..+++++++||.+||.+||.+||||+++|.|||.+.-..
T Consensus 240 -------~~P---------~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~~ 284 (313)
T KOG0198|consen 240 -------SLP---------EIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQNSI 284 (313)
T ss_pred -------CCC---------CCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhcccc
Confidence 111 255679999999999999999999999999999999987544
No 28
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.3e-49 Score=350.78 Aligned_cols=252 Identities=31% Similarity=0.456 Sum_probs=220.3
Q ss_pred cccceEEeceecccCceEEEEEEEcCCCCEEEEEEeecc-------cchHHHHHHHHHHcCCCCcccccceeeecCCCCc
Q 012233 135 QTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD-------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDE 207 (468)
Q Consensus 135 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~-------~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 207 (468)
..++|.+++.||+|-||.||+|+.+.++..||+|++.+. ...+.+|++|...|+||||+++|++| .+.
T Consensus 20 ~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~f-----hd~ 94 (281)
T KOG0580|consen 20 TLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYF-----HDS 94 (281)
T ss_pred chhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhhe-----ecc
Confidence 345799999999999999999999999999999998654 34556899999999999999999999 677
Q ss_pred eEEEEEeecccch-HHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecC
Q 012233 208 LYLNLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGS 286 (468)
Q Consensus 208 ~~~~lv~e~~~~~-ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~ 286 (468)
..+||++||.+.+ ++..+.. .....+.+..++.|+.|++.||.|+|. ++||||||||+|+|++..+ .+||+|||.
T Consensus 95 ~riyLilEya~~gel~k~L~~--~~~~~f~e~~~a~Yi~q~A~Al~y~h~-k~VIhRdiKpenlLlg~~~-~lkiAdfGw 170 (281)
T KOG0580|consen 95 KRIYLILEYAPRGELYKDLQE--GRMKRFDEQRAATYIKQLANALLYCHL-KRVIHRDIKPENLLLGSAG-ELKIADFGW 170 (281)
T ss_pred ceeEEEEEecCCchHHHHHHh--cccccccccchhHHHHHHHHHHHHhcc-CCcccCCCCHHHhccCCCC-CeeccCCCc
Confidence 7799999999855 4443331 235668899999999999999999997 9999999999999999988 799999999
Q ss_pred ccccCCCCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhh
Q 012233 287 AKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKC 366 (468)
Q Consensus 287 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 366 (468)
+...+ .....+.|||..|.+||.+.+.. ++..+|+|++|++.||++.|.+||...+..+.+.+|.+
T Consensus 171 sV~~p-~~kR~tlcgt~dyl~pEmv~~~~-hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k------------ 236 (281)
T KOG0580|consen 171 SVHAP-SNKRKTLCGTLDYLPPEMVEGRG-HDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRK------------ 236 (281)
T ss_pred eeecC-CCCceeeecccccCCHhhcCCCC-ccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHH------------
Confidence 96544 56677899999999999997665 89999999999999999999999999998888888877
Q ss_pred cCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCC
Q 012233 367 MNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDL 426 (468)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~ 426 (468)
.++.+ +..++.++.|||.+||.++|.+|++..|++.|||+...
T Consensus 237 -----~~~~~------------p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~a~ 279 (281)
T KOG0580|consen 237 -----VDLKF------------PSTISGGAADLISRLLVKNPIERLALTEVMDHPWIVAN 279 (281)
T ss_pred -----ccccC------------CcccChhHHHHHHHHhccCccccccHHHHhhhHHHHhc
Confidence 23333 35699999999999999999999999999999998753
No 29
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=2.3e-49 Score=386.96 Aligned_cols=248 Identities=32% Similarity=0.535 Sum_probs=215.4
Q ss_pred cceEEeceecccCceEEEEEEEcCCCCEEEEEEeecccc------hHHHHHHHHHHcCCCCcccccceeeecCCCCceEE
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKR------YKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYL 210 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~~------~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~ 210 (468)
.+|.+.+.||+|+||.||+|+.+.+.+.||||.+.+..+ ...+|++|++.|+|||||.++++| +....+
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esf-----Et~~~~ 76 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESF-----ETSAHL 76 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhh-----cccceE
Confidence 369999999999999999999999999999999865432 246899999999999999999999 555669
Q ss_pred EEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCcccc
Q 012233 211 NLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (468)
Q Consensus 211 ~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~ 290 (468)
|+|+|||.|++..++.. +..+++..++.+++|++.||.|||+ .+|+|||+||.|||++..+ .+|+||||+|+..
T Consensus 77 ~vVte~a~g~L~~il~~----d~~lpEe~v~~~a~~LVsaL~yLhs-~rilhrd~kPqniLl~~~~-~~KlcdFg~Ar~m 150 (808)
T KOG0597|consen 77 WVVTEYAVGDLFTILEQ----DGKLPEEQVRAIAYDLVSALYYLHS-NRILHRDMKPQNILLEKGG-TLKLCDFGLARAM 150 (808)
T ss_pred EEEehhhhhhHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHHh-cCcccccCCcceeeecCCC-ceeechhhhhhhc
Confidence 99999999988776554 6889999999999999999999998 8999999999999999888 7999999999987
Q ss_pred CCCC-CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCC
Q 012233 291 VPGE-PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP 369 (468)
Q Consensus 291 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 369 (468)
..+. ......|||.|||||++.+.+ |+..+|+||+|||+|||.+|++||...+-.+.+..|..
T Consensus 151 ~~~t~vltsikGtPlYmAPElv~e~p-yd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~--------------- 214 (808)
T KOG0597|consen 151 STNTSVLTSIKGTPLYMAPELVEEQP-YDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILK--------------- 214 (808)
T ss_pred ccCceeeeeccCcccccCHHHHcCCC-ccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhc---------------
Confidence 5543 334567999999999998655 99999999999999999999999987766555555544
Q ss_pred CCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCC
Q 012233 370 NYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDD 425 (468)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~ 425 (468)
.+.. ++..++..+.+|++.+|.+||.+|+|-.+++.|||.+.
T Consensus 215 --d~v~------------~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~k~ 256 (808)
T KOG0597|consen 215 --DPVK------------PPSTASSSFVNFLQGLLIKDPAQRLTWTDLLGHPFWKG 256 (808)
T ss_pred --CCCC------------CcccccHHHHHHHHHHhhcChhhcccHHHHhcChHHhh
Confidence 1222 22468999999999999999999999999999999986
No 30
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=1.2e-47 Score=375.30 Aligned_cols=281 Identities=31% Similarity=0.552 Sum_probs=219.2
Q ss_pred cceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc-----chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEE
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~ 211 (468)
++|.+.+.||+|+||.||+|.+..+++.||||++.... ....+|+.+++.++||||+++++++ .+..+.|
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-----~~~~~~~ 79 (303)
T cd07869 5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDII-----HTKETLT 79 (303)
T ss_pred ccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEE-----ecCCeEE
Confidence 46999999999999999999999999999999985432 2345799999999999999999988 4445689
Q ss_pred EEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccC
Q 012233 212 LVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (468)
Q Consensus 212 lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~ 291 (468)
+||||+.++++..+.. ....+++..++.++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||++....
T Consensus 80 lv~e~~~~~l~~~~~~---~~~~~~~~~~~~~~~qi~~al~~lH~-~~ivH~dlkp~Nill~~~~-~~kl~Dfg~~~~~~ 154 (303)
T cd07869 80 LVFEYVHTDLCQYMDK---HPGGLHPENVKLFLFQLLRGLSYIHQ-RYILHRDLKPQNLLISDTG-ELKLADFGLARAKS 154 (303)
T ss_pred EEEECCCcCHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEECCCC-CEEECCCCcceecc
Confidence 9999999988775543 23568889999999999999999998 8999999999999999887 79999999987543
Q ss_pred CC-CCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCc-HHHHHHHHHHhCCCCHHHHhhcC-
Q 012233 292 PG-EPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESG-VDQLVEIIKILGTPTREEIKCMN- 368 (468)
Q Consensus 292 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~~- 368 (468)
.. .......+++.|+|||++.+...++.++|||||||++|+|++|..||.+... .+.+..+...++.+....+....
T Consensus 155 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (303)
T cd07869 155 VPSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHS 234 (303)
T ss_pred CCCccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhh
Confidence 22 2233467899999999987666689999999999999999999999987644 45566676766766655443221
Q ss_pred -CCCccCCCCcccCCCcccccc-cCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCC
Q 012233 369 -PNYTEFKFPQIKAHPWHKIFH-KRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLR 427 (468)
Q Consensus 369 -~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~ 427 (468)
+.+....+.......+...+. ...++++.+||.+||++||.+|||+.|+|+||||+++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~~~ 295 (303)
T cd07869 235 LPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSDLP 295 (303)
T ss_pred ccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCcccccCC
Confidence 111111111111111111111 13567899999999999999999999999999999864
No 31
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=1.1e-47 Score=380.94 Aligned_cols=297 Identities=39% Similarity=0.669 Sum_probs=231.3
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeecc------cchHHHHHHHHHHcCCCCcccccceeeecCCCCceEEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~------~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~ 211 (468)
+|.+.+.||+|+||.||+|.+..+|..||||++... .....+|+.+++.++||||+++++++..........+|
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 499999999999999999999999999999988532 12345799999999999999999988655444445689
Q ss_pred EEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccC
Q 012233 212 LVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (468)
Q Consensus 212 lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~ 291 (468)
+|||||++++...+.. ...+++..++.++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||+++...
T Consensus 81 lv~e~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~LH~-~~ivH~dlkp~NIll~~~~-~~kL~Dfg~~~~~~ 154 (338)
T cd07859 81 VVFELMESDLHQVIKA----NDDLTPEHHQFFLYQLLRALKYIHT-ANVFHRDLKPKNILANADC-KLKICDFGLARVAF 154 (338)
T ss_pred EEEecCCCCHHHHHHh----cccCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHeEECCCC-cEEEccCccccccc
Confidence 9999999887765542 4568999999999999999999998 8999999999999999888 79999999997543
Q ss_pred CCCC----CccccccCCccccccccCC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhh
Q 012233 292 PGEP----NISYICSRYYRAPELIFGA-TEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKC 366 (468)
Q Consensus 292 ~~~~----~~~~~gt~~y~aPE~~~~~-~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 366 (468)
.... .....||+.|+|||++.+. ..++.++|||||||++|+|++|++||.+.+....+..+...++.+....+..
T Consensus 155 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (338)
T cd07859 155 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISR 234 (338)
T ss_pred cccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHH
Confidence 2211 1345789999999998542 4589999999999999999999999999888888888888888777665433
Q ss_pred cCCCCccC---CCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCCCCCCCCCCCCCCCcc
Q 012233 367 MNPNYTEF---KFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNTCLPNGRPLPTL 442 (468)
Q Consensus 367 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~~~~~~~~~~~~~~~~ 442 (468)
....-... ........++... .+.+++++.+||.+||+.||.+|||+.++++||||+.+...... +..++++.+
T Consensus 235 i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~~~~~~~-~~~~~~~~~ 311 (338)
T cd07859 235 VRNEKARRYLSSMRKKQPVPFSQK-FPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAKVERE-PSAQPITKL 311 (338)
T ss_pred hhhhhHHHHHHhhcccCCCchHHh-cCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhcCccccc-cccCccccc
Confidence 22110000 0000000111111 23478899999999999999999999999999999998775544 455565554
No 32
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-48 Score=385.14 Aligned_cols=250 Identities=28% Similarity=0.469 Sum_probs=216.3
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeecc----cchHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD----KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLV 213 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~----~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv 213 (468)
.|.....||+|+.|.||.|+...+++.||||++... +....+|+.+|+..+|+|||.+++.|+..++ +++|
T Consensus 274 ~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~de-----LWVV 348 (550)
T KOG0578|consen 274 KYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDE-----LWVV 348 (550)
T ss_pred hhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccce-----eEEE
Confidence 588889999999999999999999999999998543 3455689999999999999999999976543 8999
Q ss_pred eecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCCC
Q 012233 214 LEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPG 293 (468)
Q Consensus 214 ~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~~ 293 (468)
|||+.|+.|..+.. ...+++.++..++++++.||+|||. +||+|||||.+|||++.++ .+||+|||++..+...
T Consensus 349 MEym~ggsLTDvVt----~~~~~E~qIA~Icre~l~aL~fLH~-~gIiHrDIKSDnILL~~~g-~vKltDFGFcaqi~~~ 422 (550)
T KOG0578|consen 349 MEYMEGGSLTDVVT----KTRMTEGQIAAICREILQGLKFLHA-RGIIHRDIKSDNILLTMDG-SVKLTDFGFCAQISEE 422 (550)
T ss_pred EeecCCCchhhhhh----cccccHHHHHHHHHHHHHHHHHHHh-cceeeeccccceeEeccCC-cEEEeeeeeeeccccc
Confidence 99999877665443 3448899999999999999999997 9999999999999999998 7999999999888665
Q ss_pred C-CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCCc
Q 012233 294 E-PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYT 372 (468)
Q Consensus 294 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 372 (468)
. ...+.+|||+|||||++... .|++++||||||++++||+-|.+||-.+++...+..|.... .|
T Consensus 423 ~~KR~TmVGTPYWMAPEVvtrk-~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng-~P------------- 487 (550)
T KOG0578|consen 423 QSKRSTMVGTPYWMAPEVVTRK-PYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNG-TP------------- 487 (550)
T ss_pred cCccccccCCCCccchhhhhhc-ccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhcC-CC-------------
Confidence 5 56688999999999999655 49999999999999999999999999988877777765531 11
Q ss_pred cCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCC
Q 012233 373 EFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDD 425 (468)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~ 425 (468)
+++ .+..+|+.++||+.+||+.|+.+|++|.|||.||||+.
T Consensus 488 ~lk------------~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~HpFl~~ 528 (550)
T KOG0578|consen 488 KLK------------NPEKLSPELKDFLDRCLVVDVEQRASAKELLEHPFLKM 528 (550)
T ss_pred CcC------------CccccCHHHHHHHHHHhhcchhcCCCHHHHhcChhhhh
Confidence 111 34569999999999999999999999999999999943
No 33
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-47 Score=378.58 Aligned_cols=257 Identities=34% Similarity=0.564 Sum_probs=220.2
Q ss_pred cceEEeceecccCceEEEEEEEcCCCCEEEEEEeecccc-------hHHHHHHHHHHcC-CCCcccccceeeecCCCCce
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKR-------YKNRELQIMRLLN-HPNVVSLKHCFFSTTEKDEL 208 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~~-------~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~~~ 208 (468)
..|.+.+.||.|.||.||+|..+.+|+.+|+|.+.+... ...+|+.||+.+. |||||.+++.| ++..
T Consensus 35 ~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~-----e~~~ 109 (382)
T KOG0032|consen 35 EKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAF-----EDPD 109 (382)
T ss_pred ccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEE-----EcCC
Confidence 469999999999999999999999999999999965533 5678999999999 99999999999 5555
Q ss_pred EEEEEeecccch-HHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCC---CcEEEeee
Q 012233 209 YLNLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHT---HQLKICDF 284 (468)
Q Consensus 209 ~~~lv~e~~~~~-ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~---~~vkL~DF 284 (468)
.+++|||+|.|+ +++.+... .+++..+..++.||+.++.|||+ .||+||||||+|+|+.... ..+|++||
T Consensus 110 ~~~lvmEL~~GGeLfd~i~~~-----~~sE~da~~~~~~il~av~~lH~-~gvvHrDlKpEN~L~~~~~~~~~~ik~~DF 183 (382)
T KOG0032|consen 110 SVYLVMELCEGGELFDRIVKK-----HYSERDAAGIIRQILEAVKYLHS-LGVVHRDLKPENLLLASKDEGSGRIKLIDF 183 (382)
T ss_pred eEEEEEEecCCchHHHHHHHc-----cCCHHHHHHHHHHHHHHHHHHHh-CCceeccCCHHHeeeccccCCCCcEEEeeC
Confidence 799999999965 44433332 39999999999999999999998 8999999999999996442 26999999
Q ss_pred cCccccCCCCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHH
Q 012233 285 GSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEI 364 (468)
Q Consensus 285 G~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 364 (468)
|++.....+......+||+.|+|||++... .|+..+||||+||++|.|++|.+||.+.+......+|...
T Consensus 184 Gla~~~~~~~~~~~~~Gtp~y~APEvl~~~-~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~--------- 253 (382)
T KOG0032|consen 184 GLAKFIKPGERLHTIVGTPEYVAPEVLGGR-PYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRG--------- 253 (382)
T ss_pred CCceEccCCceEeeecCCccccCchhhcCC-CCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcC---------
Confidence 999998876677889999999999999654 4999999999999999999999999999988877766552
Q ss_pred hhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCCCCC
Q 012233 365 KCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPN 430 (468)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~~~~ 430 (468)
++.|+ ...|..++..+++||.+||..||.+|+|+.++|+|||++......
T Consensus 254 --------~~~f~--------~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~~~~~~~ 303 (382)
T KOG0032|consen 254 --------DFDFT--------SEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQHPWIKSIGEAT 303 (382)
T ss_pred --------CCCCC--------CCCccccCHHHHHHHHHhcccCcccCCCHHHHhcCccccCCcccc
Confidence 22221 224466899999999999999999999999999999998864443
No 34
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=5.9e-47 Score=367.03 Aligned_cols=275 Identities=39% Similarity=0.718 Sum_probs=222.2
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc------chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~ 211 (468)
+|.+.+.||+|+||.||+|++..+++.||+|++.... ....+|+.+++.++||||+++++++ .....+|
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~~ 76 (287)
T cd07848 2 KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAF-----RRRGKLY 76 (287)
T ss_pred CceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhE-----ecCCEEE
Confidence 5999999999999999999999999999999886432 2345799999999999999999988 4445689
Q ss_pred EEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccC
Q 012233 212 LVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (468)
Q Consensus 212 lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~ 291 (468)
+||||+.++++..+.. ....+++..++.++.||+.||.|||+ .||+||||||+|||++.++ .+||+|||++....
T Consensus 77 lv~e~~~~~~l~~~~~---~~~~~~~~~~~~~~~qi~~~L~~lH~-~~i~H~dlkp~Nill~~~~-~~kl~Dfg~~~~~~ 151 (287)
T cd07848 77 LVFEYVEKNMLELLEE---MPNGVPPEKVRSYIYQLIKAIHWCHK-NDIVHRDIKPENLLISHND-VLKLCDFGFARNLS 151 (287)
T ss_pred EEEecCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEEcCCC-cEEEeeccCccccc
Confidence 9999999987775432 24568999999999999999999998 8999999999999999887 79999999998764
Q ss_pred CCC--CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhc--
Q 012233 292 PGE--PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCM-- 367 (468)
Q Consensus 292 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~-- 367 (468)
... ......|++.|+|||++.+.. ++.++|||||||++|||++|++||.+.+..+....+....+..+...+...
T Consensus 152 ~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (287)
T cd07848 152 EGSNANYTEYVATRWYRSPELLLGAP-YGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYS 230 (287)
T ss_pred ccccccccccccccccCCcHHHcCCC-CCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhc
Confidence 322 223457899999999997654 899999999999999999999999998888888777777766665544322
Q ss_pred CCCCccCCCCccc-CCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCC
Q 012233 368 NPNYTEFKFPQIK-AHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (468)
Q Consensus 368 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f 423 (468)
.+.+....++... ...+...+...++.++.+||++||++||.+|||++++|+||||
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f 287 (287)
T cd07848 231 NPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF 287 (287)
T ss_pred cchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 1222222222211 1122233445688999999999999999999999999999998
No 35
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-47 Score=364.14 Aligned_cols=284 Identities=25% Similarity=0.415 Sum_probs=225.6
Q ss_pred CCCCcccceEEeceecccCceEEEEEEEcCCCCEEEEEEeecc-----cchHHHHHHHHHHcCCCCcccccceeeecCCC
Q 012233 131 GQPKQTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD-----KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEK 205 (468)
Q Consensus 131 ~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~-----~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 205 (468)
..+.....|.+..+||.|..++||+|++..+++.||||++.-+ ...+.+|+..|+.++||||++++.+|..
T Consensus 20 ~~p~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv---- 95 (516)
T KOG0582|consen 20 EFPLNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVV---- 95 (516)
T ss_pred cCCCCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEe----
Confidence 3455556799999999999999999999999999999998533 2456689999999999999999998844
Q ss_pred CceEEEEEeeccc-chHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeee
Q 012233 206 DELYLNLVLEYIS-ETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDF 284 (468)
Q Consensus 206 ~~~~~~lv~e~~~-~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DF 284 (468)
...+|+||.||. |+++++++.+. ...+.+..+..+.+++++||.|||. +|.||||||+.||||+.+| .|||+||
T Consensus 96 -~~~LWvVmpfMa~GS~ldIik~~~--~~Gl~E~~Ia~iLre~LkaL~YLH~-~G~IHRdvKAgnILi~~dG-~VkLadF 170 (516)
T KOG0582|consen 96 -DSELWVVMPFMAGGSLLDIIKTYY--PDGLEEASIATILREVLKALDYLHQ-NGHIHRDVKAGNILIDSDG-TVKLADF 170 (516)
T ss_pred -cceeEEeehhhcCCcHHHHHHHHc--cccccHHHHHHHHHHHHHHHHHHHh-cCceecccccccEEEcCCC-cEEEcCc
Confidence 345999999998 56677776654 4559999999999999999999998 9999999999999999999 8999999
Q ss_pred cCccccCCCCC-----CccccccCCccccccc-cCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCC
Q 012233 285 GSAKMLVPGEP-----NISYICSRYYRAPELI-FGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGT 358 (468)
Q Consensus 285 G~a~~~~~~~~-----~~~~~gt~~y~aPE~~-~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~ 358 (468)
|.+..+..... ..+++||++|||||++ ....+|+.|+||||||++..||.+|+.||....+...+..-++ +.
T Consensus 171 gvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLq--n~ 248 (516)
T KOG0582|consen 171 GVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQ--ND 248 (516)
T ss_pred eeeeeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhc--CC
Confidence 99866643321 1567899999999995 4445699999999999999999999999998877776554333 22
Q ss_pred CCHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCCC-CCCCCCCCC
Q 012233 359 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRD-PNTCLPNGR 437 (468)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~~-~~~~~~~~~ 437 (468)
|+... .......-.+..+..++++|..||++||.+||||+++|.|+||+.... ........+
T Consensus 249 pp~~~-----------------t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~~k~~~~~~~~~l~ 311 (516)
T KOG0582|consen 249 PPTLL-----------------TSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKKAKSKEYLVKKLLQ 311 (516)
T ss_pred CCCcc-----------------cccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhhccchhhcchhhhc
Confidence 22110 000111112346778999999999999999999999999999998755 333444445
Q ss_pred CCCcc
Q 012233 438 PLPTL 442 (468)
Q Consensus 438 ~~~~~ 442 (468)
.+|.+
T Consensus 312 ~l~~l 316 (516)
T KOG0582|consen 312 SLPPL 316 (516)
T ss_pred cCCcH
Confidence 55555
No 36
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.4e-49 Score=355.36 Aligned_cols=259 Identities=29% Similarity=0.468 Sum_probs=218.6
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeecc------------cchHHHHHHHHHHcC-CCCcccccceeeecCC
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD------------KRYKNRELQIMRLLN-HPNVVSLKHCFFSTTE 204 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~------------~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~ 204 (468)
.|...++||.|..+.|.+|..+.+|..+|+|++... .....+|+.||+++. ||+|+++.++|
T Consensus 18 ~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~y----- 92 (411)
T KOG0599|consen 18 KYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVY----- 92 (411)
T ss_pred hcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeec-----
Confidence 488889999999999999999999999999988321 112236999999984 99999999999
Q ss_pred CCceEEEEEeecccch-HHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEee
Q 012233 205 KDELYLNLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICD 283 (468)
Q Consensus 205 ~~~~~~~lv~e~~~~~-ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~D 283 (468)
+...++|+|+|.|+.| +.+.+. ..-.+++...+.+++|++.|+.|||. ++||||||||+|||++.+. ++||+|
T Consensus 93 es~sF~FlVFdl~prGELFDyLt----s~VtlSEK~tR~iMrqlfegVeylHa-~~IVHRDLKpENILlddn~-~i~isD 166 (411)
T KOG0599|consen 93 ESDAFVFLVFDLMPRGELFDYLT----SKVTLSEKETRRIMRQLFEGVEYLHA-RNIVHRDLKPENILLDDNM-NIKISD 166 (411)
T ss_pred cCcchhhhhhhhcccchHHHHhh----hheeecHHHHHHHHHHHHHHHHHHHH-hhhhhcccChhheeecccc-ceEEec
Confidence 7777899999999954 444332 24568899999999999999999996 9999999999999999887 899999
Q ss_pred ecCccccCCCCCCccccccCCcccccccc-----CCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCC
Q 012233 284 FGSAKMLVPGEPNISYICSRYYRAPELIF-----GATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGT 358 (468)
Q Consensus 284 FG~a~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~ 358 (468)
||+++.+.+++.....||||.|+|||.+. +.++|+..+|+|++|||||.||.|.+||......-.+..|++.
T Consensus 167 FGFa~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeG--- 243 (411)
T KOG0599|consen 167 FGFACQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEG--- 243 (411)
T ss_pred cceeeccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhc---
Confidence 99999999999999999999999999984 4466999999999999999999999999877666666666652
Q ss_pred CCHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCCCCCCC
Q 012233 359 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNTC 432 (468)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~~~~~~ 432 (468)
.+.|. ..-|.+++.+.+|||.+||+.||.+|+|++|+|.||||..+.....+
T Consensus 244 --------------kyqF~--------speWadis~~~KdLIsrlLqVdp~~Ritake~LaHpff~q~~~~~~r 295 (411)
T KOG0599|consen 244 --------------KYQFR--------SPEWADISATVKDLISRLLQVDPTKRITAKEALAHPFFIQIAQQQAR 295 (411)
T ss_pred --------------ccccC--------CcchhhccccHHHHHHHHHeeCchhcccHHHHhcChHHHHHHHhccc
Confidence 22221 11345689999999999999999999999999999999876554443
No 37
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=8.8e-47 Score=370.08 Aligned_cols=283 Identities=33% Similarity=0.628 Sum_probs=230.2
Q ss_pred cceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc-----chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEE
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~ 211 (468)
..|.+.+.||+|+||.||+|.+..+++.||+|.+.... ....+|+.+++.++||||+++++++. .....+
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~~ 80 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVH-----TDKSLT 80 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEe-----eCCeEE
Confidence 46999999999999999999999999999999885332 23457999999999999999999883 344689
Q ss_pred EEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccC
Q 012233 212 LVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (468)
Q Consensus 212 lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~ 291 (468)
+||||+.+++...+.. ....+++..++.++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||++....
T Consensus 81 lv~e~~~~~l~~~~~~---~~~~~~~~~~~~~~~qi~~aL~~lH~-~~ivH~dlkp~Nill~~~~-~~kl~Dfg~~~~~~ 155 (309)
T cd07872 81 LVFEYLDKDLKQYMDD---CGNIMSMHNVKIFLYQILRGLAYCHR-RKVLHRDLKPQNLLINERG-ELKLADFGLARAKS 155 (309)
T ss_pred EEEeCCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEECCCC-CEEECccccceecC
Confidence 9999999887765433 23457888999999999999999998 8999999999999999887 79999999987543
Q ss_pred CCC-CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCC-
Q 012233 292 PGE-PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP- 369 (468)
Q Consensus 292 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~- 369 (468)
... ......+++.|+|||++.+...++.++|||||||++|+|++|++||.+.+..+.+..+...++.+....+.....
T Consensus 156 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (309)
T cd07872 156 VPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSN 235 (309)
T ss_pred CCccccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcch
Confidence 222 223456789999999987666689999999999999999999999999998899999999998888776654332
Q ss_pred -CCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCCCCC
Q 012233 370 -NYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPN 430 (468)
Q Consensus 370 -~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~~~~ 430 (468)
.+..+.++......+.. ....+++++++||.+||+.||.+|||+.|++.||||+.+....
T Consensus 236 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~~~~ 296 (309)
T cd07872 236 DEFKNYNFPKYKPQPLIN-HAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSLGTRI 296 (309)
T ss_pred hhhhhhhcCccCCCchhh-hccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhhccccc
Confidence 22233333332222222 2245889999999999999999999999999999999875443
No 38
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=5.3e-46 Score=384.92 Aligned_cols=282 Identities=23% Similarity=0.372 Sum_probs=212.9
Q ss_pred ccceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc---chHHHHHHHHHHcCCC------CcccccceeeecCCCC
Q 012233 136 TISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK---RYKNRELQIMRLLNHP------NVVSLKHCFFSTTEKD 206 (468)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~---~~~~~E~~il~~l~hp------nIv~l~~~~~~~~~~~ 206 (468)
..+|.+.+.||+|+||+||+|.+..+++.||||++.... .....|+.+++.++|. +|++++++|.. .
T Consensus 128 ~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~----~ 203 (467)
T PTZ00284 128 TQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQN----E 203 (467)
T ss_pred CCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEc----C
Confidence 457999999999999999999999999999999986432 2345688888888654 47778777642 2
Q ss_pred ceEEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCC---------
Q 012233 207 ELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTH--------- 277 (468)
Q Consensus 207 ~~~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~--------- 277 (468)
..++|||||++++.++..+.. ...+++..++.++.||+.||.|||+..|||||||||+||||+.++.
T Consensus 204 ~~~~~iv~~~~g~~l~~~l~~----~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~ 279 (467)
T PTZ00284 204 TGHMCIVMPKYGPCLLDWIMK----HGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRA 279 (467)
T ss_pred CceEEEEEeccCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccc
Confidence 336889999998888875543 3568999999999999999999995249999999999999986542
Q ss_pred ------cEEEeeecCccccCCCCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHH
Q 012233 278 ------QLKICDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVE 351 (468)
Q Consensus 278 ------~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~ 351 (468)
.+||+|||.+... .......+||+.|+|||++.+.. |+.++|||||||++|||++|++||.+.+..+.+..
T Consensus 280 ~~~~~~~vkl~DfG~~~~~--~~~~~~~~gt~~Y~APE~~~~~~-~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~ 356 (467)
T PTZ00284 280 LPPDPCRVRICDLGGCCDE--RHSRTAIVSTRHYRSPEVVLGLG-WMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHL 356 (467)
T ss_pred cCCCCceEEECCCCccccC--ccccccccCCccccCcHHhhcCC-CCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Confidence 4999999987543 22344678999999999997654 99999999999999999999999999888888888
Q ss_pred HHHHhCCCCHHHHhhcCCC-----CccCC--CCcccCCCcccc-----c-ccCCCHHHHHHHHHhcccCCCCCCCHHHHh
Q 012233 352 IIKILGTPTREEIKCMNPN-----YTEFK--FPQIKAHPWHKI-----F-HKRMPPEALDLVSRLLQYSPSLRCTALEAC 418 (468)
Q Consensus 352 i~~~~~~~~~~~~~~~~~~-----~~~~~--~~~~~~~~~~~~-----~-~~~~~~~l~~li~~~L~~dP~~R~s~~ell 418 (468)
+.+.++.++.......... +.... .+......+... + ....++.+.|||.+||++||.+|||+.|+|
T Consensus 357 i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L 436 (467)
T PTZ00284 357 MEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMT 436 (467)
T ss_pred HHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHh
Confidence 8888887665433211100 00000 000000000000 0 001246788999999999999999999999
Q ss_pred CCCCCCCCCC
Q 012233 419 AHPFFDDLRD 428 (468)
Q Consensus 419 ~hp~f~~~~~ 428 (468)
+||||.....
T Consensus 437 ~Hp~~~~~~~ 446 (467)
T PTZ00284 437 THPYVLKYYP 446 (467)
T ss_pred cCccccccCC
Confidence 9999987533
No 39
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=1.1e-46 Score=365.66 Aligned_cols=279 Identities=33% Similarity=0.574 Sum_probs=220.1
Q ss_pred ceEEeceecccCceEEEEEEEcC-CCCEEEEEEeeccc------chHHHHHHHHHHc---CCCCcccccceeeecCCCCc
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLE-TGDSVAIKKVLQDK------RYKNRELQIMRLL---NHPNVVSLKHCFFSTTEKDE 207 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~-~g~~vaiK~~~~~~------~~~~~E~~il~~l---~hpnIv~l~~~~~~~~~~~~ 207 (468)
+|.+.+.||+|+||.||+|.+.. +|..||+|.+.... ....+|+.+++.+ .||||+++++++........
T Consensus 2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~ 81 (290)
T cd07862 2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE 81 (290)
T ss_pred CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCC
Confidence 59999999999999999999854 46889999875321 2334677777766 69999999998854433344
Q ss_pred eEEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCc
Q 012233 208 LYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSA 287 (468)
Q Consensus 208 ~~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a 287 (468)
..+++||||+.+++...+... ....+++..++.++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||++
T Consensus 82 ~~~~lv~e~~~~~l~~~~~~~--~~~~~~~~~~~~i~~qi~~aL~~lH~-~~iiH~dlkp~Nil~~~~~-~~kl~Dfg~~ 157 (290)
T cd07862 82 TKLTLVFEHVDQDLTTYLDKV--PEPGVPTETIKDMMFQLLRGLDFLHS-HRVVHRDLKPQNILVTSSG-QIKLADFGLA 157 (290)
T ss_pred CcEEEEEccCCCCHHHHHHhC--CCCCCCHHHHHHHHHHHHHHHHHHHH-CCeeeCCCCHHHEEEcCCC-CEEEccccce
Confidence 568899999998877765432 23458899999999999999999998 8999999999999999888 7999999999
Q ss_pred cccCCCCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhc
Q 012233 288 KMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCM 367 (468)
Q Consensus 288 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 367 (468)
.............||+.|+|||++.+. .++.++|||||||++|||++|.+||.+.+..+.+.+++...+.+....+...
T Consensus 158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~ 236 (290)
T cd07862 158 RIYSFQMALTSVVVTLWYRAPEVLLQS-SYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRD 236 (290)
T ss_pred EeccCCcccccccccccccChHHHhCC-CCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhh
Confidence 876544444566789999999999655 4899999999999999999999999999999999999988877765544321
Q ss_pred CCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCC
Q 012233 368 NPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (468)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f 423 (468)
.. .....+......+. ..+.+.+++.+++||.+||+.||.+|||+.++|+||||
T Consensus 237 ~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp~f 290 (290)
T cd07862 237 VA-LPRQAFHSKSAQPI-EKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 290 (290)
T ss_pred hc-ccchhccCCCCCCH-HHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcCCCC
Confidence 10 11111111111111 12335688999999999999999999999999999998
No 40
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=2.7e-46 Score=375.19 Aligned_cols=296 Identities=31% Similarity=0.541 Sum_probs=232.9
Q ss_pred cceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc------chHHHHHHHHHHcCCCCcccccceeeecCC-CCceE
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTE-KDELY 209 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~-~~~~~ 209 (468)
.+|.+.+.||+|+||.||+|.+..+++.||||++.... ....+|+.+++.++||||+++++++..... .....
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~~ 103 (364)
T cd07875 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQD 103 (364)
T ss_pred cceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccCe
Confidence 46999999999999999999999999999999885421 234579999999999999999998743321 22345
Q ss_pred EEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccc
Q 012233 210 LNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (468)
Q Consensus 210 ~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~ 289 (468)
+|+||||+.+++...+. ..++...++.++.|++.||.|||+ +||+||||||+|||++.++ .+||+|||+++.
T Consensus 104 ~~lv~e~~~~~l~~~~~------~~~~~~~~~~~~~qi~~aL~~LH~-~~ivH~Dlkp~NIll~~~~-~~kL~DfG~a~~ 175 (364)
T cd07875 104 VYIVMELMDANLCQVIQ------MELDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDC-TLKILDFGLART 175 (364)
T ss_pred EEEEEeCCCCCHHHHHH------hcCCHHHHHHHHHHHHHHHHHHhh-CCeecCCCCHHHEEECCCC-cEEEEeCCCccc
Confidence 78999999998776542 347788899999999999999998 8999999999999999888 799999999986
Q ss_pred cCCCCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCC
Q 012233 290 LVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP 369 (468)
Q Consensus 290 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 369 (468)
...........+|+.|+|||++.+. .++.++|||||||++|+|++|+.||.+.+..+.+.+++..++.|..+.+....+
T Consensus 176 ~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (364)
T cd07875 176 AGTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQP 254 (364)
T ss_pred cCCCCcccCCcccCCcCCHHHHhCC-CCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhH
Confidence 6544444566889999999999765 489999999999999999999999999999999999988888877655443321
Q ss_pred ----------CCccCCCCccc---CCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCCCCCCCCCCC
Q 012233 370 ----------NYTEFKFPQIK---AHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNTCLPNG 436 (468)
Q Consensus 370 ----------~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~~~~~~~~~~ 436 (468)
.+..+.+.... ..++........+..+++||.+||+.||.+|||+.++|+||||..+.++..+....
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~~~~~~~~~~~~~ 334 (364)
T cd07875 255 TVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSEAEAPP 334 (364)
T ss_pred HHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCcccccccCcccCCCCC
Confidence 11111111100 01112222334567899999999999999999999999999999887776665444
Q ss_pred CCCCc
Q 012233 437 RPLPT 441 (468)
Q Consensus 437 ~~~~~ 441 (468)
+.+|.
T Consensus 335 ~~~~~ 339 (364)
T cd07875 335 PKIPD 339 (364)
T ss_pred CCCCC
Confidence 44443
No 41
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.5e-46 Score=376.24 Aligned_cols=286 Identities=31% Similarity=0.553 Sum_probs=224.2
Q ss_pred cceEEeceecccCceEEEEEEEcCCCCEEEEEEeecc------cchHHHHHHHHHHcCCCCcccccceeeecCC-CCceE
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTE-KDELY 209 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~------~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~-~~~~~ 209 (468)
.+|.+.+.||+|+||.||+|.+..+|..||+|++... .....+|+.+++.++||||++++++|..... .....
T Consensus 21 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 100 (359)
T cd07876 21 KRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQD 100 (359)
T ss_pred hceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccce
Confidence 4699999999999999999999999999999998542 2234579999999999999999998854332 12235
Q ss_pred EEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccc
Q 012233 210 LNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (468)
Q Consensus 210 ~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~ 289 (468)
+|+||||+.+++...+. ..++...+..++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||+++.
T Consensus 101 ~~lv~e~~~~~l~~~~~------~~~~~~~~~~~~~qi~~~L~~LH~-~~ivHrDlkp~NIl~~~~~-~~kl~Dfg~a~~ 172 (359)
T cd07876 101 VYLVMELMDANLCQVIH------MELDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDC-TLKILDFGLART 172 (359)
T ss_pred eEEEEeCCCcCHHHHHh------ccCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCHHHEEECCCC-CEEEecCCCccc
Confidence 78999999988776442 347888899999999999999998 8999999999999999888 799999999976
Q ss_pred cCCCCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhc--
Q 012233 290 LVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCM-- 367 (468)
Q Consensus 290 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~-- 367 (468)
...........||+.|+|||++.+. .++.++|||||||++|+|++|+.||.+.+..+.+..+++.++.|....+...
T Consensus 173 ~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (359)
T cd07876 173 ACTNFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQP 251 (359)
T ss_pred cccCccCCCCcccCCCCCchhccCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHH
Confidence 5444444556889999999999765 4899999999999999999999999998888888888888887775433221
Q ss_pred --------CCCCccCCCCcc-cCC--CcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCCCCCC
Q 012233 368 --------NPNYTEFKFPQI-KAH--PWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNT 431 (468)
Q Consensus 368 --------~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~~~~~ 431 (468)
.+.+....+... ..+ +.........++++++||.+||+.||.+|||+.|+|+||||..+..+..
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~~~~~ 326 (359)
T cd07876 252 TVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYITVWYDPAE 326 (359)
T ss_pred HHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCchhhhhcCccc
Confidence 111111111100 000 0001122345788999999999999999999999999999997666543
No 42
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-47 Score=369.50 Aligned_cols=257 Identities=28% Similarity=0.440 Sum_probs=226.7
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeecccc------hHHHHHHHHHHcCCCCcccccceeeecCCCCceEEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKR------YKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~~------~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~ 211 (468)
-|.+++.||+|.|+.|-+|++.-+|+.||||++.+.+. .+.+|+..|+.++|||||+||.+..+. ..+|
T Consensus 19 LYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQ-----TKly 93 (864)
T KOG4717|consen 19 LYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQ-----TKLY 93 (864)
T ss_pred eehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhccc-----ceEE
Confidence 49999999999999999999999999999999976543 345799999999999999999988443 3499
Q ss_pred EEeecccc-hHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCcccc
Q 012233 212 LVLEYISE-TVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (468)
Q Consensus 212 lv~e~~~~-~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~ 290 (468)
||+|+-.+ ++++++ .+....+.+..+++|+.||+.|+.|+|+ ..+|||||||+||.+-..-+-|||+|||++..+
T Consensus 94 LiLELGD~GDl~DyI---mKHe~Gl~E~La~kYF~QI~~AI~YCHq-LHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf 169 (864)
T KOG4717|consen 94 LILELGDGGDLFDYI---MKHEEGLNEDLAKKYFAQIVHAISYCHQ-LHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKF 169 (864)
T ss_pred EEEEecCCchHHHHH---HhhhccccHHHHHHHHHHHHHHHHHHhh-hhhhcccCCcceeEEeeecCceEeeeccccccC
Confidence 99999986 555543 3446789999999999999999999998 899999999999876555447999999999999
Q ss_pred CCCCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCC
Q 012233 291 VPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPN 370 (468)
Q Consensus 291 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 370 (468)
.++....+.||+..|.|||++.|.....+++||||||||||.|++|++||...+..+.+..|+.+.
T Consensus 170 ~PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCK-------------- 235 (864)
T KOG4717|consen 170 QPGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCK-------------- 235 (864)
T ss_pred CCcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhccc--------------
Confidence 999999999999999999999998877789999999999999999999999999999999998843
Q ss_pred CccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCCCCCCC
Q 012233 371 YTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNTC 432 (468)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~~~~~~ 432 (468)
+. ++..++.++++||.+||..||.+|.+.+++..|+|++.+..+...
T Consensus 236 ---Yt------------vPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~~D~~~sT 282 (864)
T KOG4717|consen 236 ---YT------------VPSHVSKECRDLIQSMLVRDPKKRASLEEIVSTSWLQAGDRGLST 282 (864)
T ss_pred ---cc------------CchhhhHHHHHHHHHHHhcCchhhccHHHHhccccccCCCCCccc
Confidence 22 345689999999999999999999999999999999998765544
No 43
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=1.2e-46 Score=366.09 Aligned_cols=248 Identities=25% Similarity=0.396 Sum_probs=207.8
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeecc-------cchHHHHHHHHHHcCCCCcccccceeeecCCCCceEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD-------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYL 210 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~-------~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~ 210 (468)
+|.+.+.||+|+||.||+|.+..+|+.||+|++... .....+|+.+++.++||||+++++++ .+..++
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~~~~ 76 (291)
T cd05612 2 DLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTE-----HDQRFL 76 (291)
T ss_pred CceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhh-----ccCCeE
Confidence 599999999999999999999999999999998542 22345799999999999999999887 555679
Q ss_pred EEEeecccchHH-HHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccc
Q 012233 211 NLVLEYISETVY-RVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (468)
Q Consensus 211 ~lv~e~~~~~ll-~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~ 289 (468)
|+||||+.++.+ +.+. ....+++..++.++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||++..
T Consensus 77 ~lv~e~~~~~~L~~~~~----~~~~~~~~~~~~~~~qi~~~l~~lH~-~~i~H~dlkp~NIli~~~~-~~kl~Dfg~~~~ 150 (291)
T cd05612 77 YMLMEYVPGGELFSYLR----NSGRFSNSTGLFYASEIVCALEYLHS-KEIVYRDLKPENILLDKEG-HIKLTDFGFAKK 150 (291)
T ss_pred EEEEeCCCCCCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHH-CCeeecCCCHHHeEECCCC-CEEEEecCcchh
Confidence 999999987644 3332 24568899999999999999999998 8999999999999999887 799999999976
Q ss_pred cCCCCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCC
Q 012233 290 LVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP 369 (468)
Q Consensus 290 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 369 (468)
... .....+|++.|+|||++.+.. ++.++|||||||++|+|++|+.||.+.+..+.+..+...
T Consensus 151 ~~~--~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~-------------- 213 (291)
T cd05612 151 LRD--RTWTLCGTPEYLAPEVIQSKG-HNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAG-------------- 213 (291)
T ss_pred ccC--CcccccCChhhcCHHHHcCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC--------------
Confidence 533 233567899999999986654 899999999999999999999999987766666555431
Q ss_pred CCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCC-----HHHHhCCCCCCCCCC
Q 012233 370 NYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCT-----ALEACAHPFFDDLRD 428 (468)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s-----~~ell~hp~f~~~~~ 428 (468)
... ++..+++.+++||++||+.||.+|++ +.+++.||||+.+..
T Consensus 214 ---~~~------------~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~~ 262 (291)
T cd05612 214 ---KLE------------FPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKSVDW 262 (291)
T ss_pred ---CcC------------CCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccccCCCH
Confidence 111 23457889999999999999999995 999999999987654
No 44
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=6.5e-46 Score=359.80 Aligned_cols=279 Identities=29% Similarity=0.531 Sum_probs=221.3
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc------chHHHHHHHHHHc---CCCCcccccceeeecCCCCce
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------RYKNRELQIMRLL---NHPNVVSLKHCFFSTTEKDEL 208 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~------~~~~~E~~il~~l---~hpnIv~l~~~~~~~~~~~~~ 208 (468)
+|.+.+.||+|+||.||+|.++.+|+.||+|.+.... ....+|+.+++.+ +||||+++++++.........
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 4899999999999999999999999999999885421 2334677777766 699999999988654444456
Q ss_pred EEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCcc
Q 012233 209 YLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAK 288 (468)
Q Consensus 209 ~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~ 288 (468)
.+++||||+.+++...+... ....+++..++.++.||+.||.|||+ .||+||||||+|||++.++ .+||+|||++.
T Consensus 81 ~~~lv~e~~~~~l~~~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~-~~ivH~dikp~Nili~~~~-~~kl~dfg~~~ 156 (288)
T cd07863 81 KVTLVFEHVDQDLRTYLDKV--PPPGLPAETIKDLMRQFLRGLDFLHA-NCIVHRDLKPENILVTSGG-QVKLADFGLAR 156 (288)
T ss_pred eEEEEEcccccCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEECCCC-CEEECccCccc
Confidence 68899999998777655432 23458999999999999999999998 8999999999999999888 79999999998
Q ss_pred ccCCCCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcC
Q 012233 289 MLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMN 368 (468)
Q Consensus 289 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 368 (468)
............+|..|+|||++.+.. ++.++|||||||++|+|++|++||.+....+.+.+++...+.+....+....
T Consensus 157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (288)
T cd07863 157 IYSCQMALTPVVVTLWYRAPEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDV 235 (288)
T ss_pred cccCcccCCCccccccccCchHhhCCC-CCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcccc
Confidence 765444444567899999999997654 8999999999999999999999999988888888888887776655443211
Q ss_pred CCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCC
Q 012233 369 PNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (468)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f 423 (468)
......+......++ ..+.+.+++.+.+||.+||++||.+|||+.+++.||||
T Consensus 236 -~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~f 288 (288)
T cd07863 236 -TLPRGAFSPRGPRPV-QSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF 288 (288)
T ss_pred -cccccccCCCCCCch-HHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 000111111111111 12334678899999999999999999999999999998
No 45
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=4.9e-46 Score=372.01 Aligned_cols=285 Identities=33% Similarity=0.564 Sum_probs=226.5
Q ss_pred ccceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc------chHHHHHHHHHHcCCCCcccccceeeecCC-CCce
Q 012233 136 TISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTE-KDEL 208 (468)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~-~~~~ 208 (468)
..+|.+.+.||+|+||.||+|.+..+++.||||.+.... ....+|+.+++.++||||++++++|..... ....
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 95 (355)
T cd07874 16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQ 95 (355)
T ss_pred hhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccccc
Confidence 346999999999999999999999999999999885431 233469999999999999999998754332 2233
Q ss_pred EEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCcc
Q 012233 209 YLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAK 288 (468)
Q Consensus 209 ~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~ 288 (468)
.+|+||||+.+++...+. ..++...++.++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||+++
T Consensus 96 ~~~lv~e~~~~~l~~~~~------~~l~~~~~~~~~~qi~~aL~~LH~-~givHrDikp~Nill~~~~-~~kl~Dfg~~~ 167 (355)
T cd07874 96 DVYLVMELMDANLCQVIQ------MELDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDC-TLKILDFGLAR 167 (355)
T ss_pred eeEEEhhhhcccHHHHHh------hcCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCChHHEEECCCC-CEEEeeCcccc
Confidence 578999999988776442 347888899999999999999998 8999999999999999888 79999999998
Q ss_pred ccCCCCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcC
Q 012233 289 MLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMN 368 (468)
Q Consensus 289 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 368 (468)
............||+.|+|||++.+. .++.++|||||||++|+|++|+.||.+.+..+.+..++..++.+..+.+....
T Consensus 168 ~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (355)
T cd07874 168 TAGTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ 246 (355)
T ss_pred cCCCccccCCccccCCccCHHHHcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhc
Confidence 66544444567889999999999765 48999999999999999999999999998888888888888877765443322
Q ss_pred ----------CCCccCCCCcccC---CCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCCCC
Q 012233 369 ----------PNYTEFKFPQIKA---HPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDP 429 (468)
Q Consensus 369 ----------~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~~~ 429 (468)
+.+....++..-. .+.........+.++++||.+||+.||.+|||+.|+|+||||...-++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~~~~~~ 320 (355)
T cd07874 247 PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYINVWYDP 320 (355)
T ss_pred HHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcchhcccCh
Confidence 2222222221100 111122334457789999999999999999999999999999876554
No 46
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=2.1e-46 Score=363.22 Aligned_cols=256 Identities=25% Similarity=0.389 Sum_probs=207.3
Q ss_pred eEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc-------chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEE
Q 012233 139 YMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (468)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~ 211 (468)
|.+.+.||+|+||.||+|.+..+|+.||+|.+.... ....+|+.+++.++|+||+++++++ .+..+++
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~-----~~~~~~~ 76 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAY-----ETKDALC 76 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEE-----ccCCeEE
Confidence 888999999999999999999999999999885432 2345799999999999999999888 4445689
Q ss_pred EEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccC
Q 012233 212 LVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (468)
Q Consensus 212 lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~ 291 (468)
+||||+.++.+..... ......+++..+..++.|++.||.|||+ .||+||||||+|||++.++ .++|+|||++....
T Consensus 77 lv~e~~~~g~L~~~~~-~~~~~~~~~~~~~~~~~qi~~~l~~lH~-~~iiH~dikp~Nill~~~~-~~kl~Dfg~~~~~~ 153 (285)
T cd05631 77 LVLTIMNGGDLKFHIY-NMGNPGFDEQRAIFYAAELCCGLEDLQR-ERIVYRDLKPENILLDDRG-HIRISDLGLAVQIP 153 (285)
T ss_pred EEEEecCCCcHHHHHH-hhCCCCCCHHHHHHHHHHHHHHHHHHHh-CCEEeCCCCHHHEEECCCC-CEEEeeCCCcEEcC
Confidence 9999999775543222 1123468899999999999999999998 8999999999999999887 79999999998765
Q ss_pred CCCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCC
Q 012233 292 PGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNY 371 (468)
Q Consensus 292 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 371 (468)
.........||+.|+|||++.+. .++.++|||||||++|+|++|+.||...........+...+...
T Consensus 154 ~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~------------ 220 (285)
T cd05631 154 EGETVRGRVGTVGYMAPEVINNE-KYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKED------------ 220 (285)
T ss_pred CCCeecCCCCCCCccCHhhhcCC-CCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhcc------------
Confidence 44444566889999999999755 48999999999999999999999998765433333322211110
Q ss_pred ccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCC-----HHHHhCCCCCCCCCC
Q 012233 372 TEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCT-----ALEACAHPFFDDLRD 428 (468)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s-----~~ell~hp~f~~~~~ 428 (468)
...++..+++++.+||.+||+.||.+|++ ++++++||||+++..
T Consensus 221 -------------~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~~~ 269 (285)
T cd05631 221 -------------QEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNINF 269 (285)
T ss_pred -------------cccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCCCH
Confidence 01133458899999999999999999997 899999999998653
No 47
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=2e-46 Score=370.88 Aligned_cols=249 Identities=29% Similarity=0.436 Sum_probs=207.8
Q ss_pred cccceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc-------chHHHHHHHHHHcCCCCcccccceeeecCCCCc
Q 012233 135 QTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDE 207 (468)
Q Consensus 135 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 207 (468)
...+|.+.+.||+|+||.||+|.+..+|+.||||++.... ....+|+.+++.++||||+++++++ .+.
T Consensus 16 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~ 90 (329)
T PTZ00263 16 KLSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSF-----QDE 90 (329)
T ss_pred CchheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEE-----EcC
Confidence 3457999999999999999999999999999999986432 2345799999999999999999988 445
Q ss_pred eEEEEEeecccchHHH-HHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecC
Q 012233 208 LYLNLVLEYISETVYR-VSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGS 286 (468)
Q Consensus 208 ~~~~lv~e~~~~~ll~-~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~ 286 (468)
.++|+||||+.++.+. .+. ....+++..++.++.||+.||.|||+ +||+||||||+||||+.++ .+||+|||+
T Consensus 91 ~~~~lv~e~~~~~~L~~~l~----~~~~~~~~~~~~~~~qi~~aL~~LH~-~~ivH~dlkp~NIll~~~~-~~kl~Dfg~ 164 (329)
T PTZ00263 91 NRVYFLLEFVVGGELFTHLR----KAGRFPNDVAKFYHAELVLAFEYLHS-KDIIYRDLKPENLLLDNKG-HVKVTDFGF 164 (329)
T ss_pred CEEEEEEcCCCCChHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHH-CCeeecCCCHHHEEECCCC-CEEEeeccC
Confidence 5689999999876443 322 24568899999999999999999998 8999999999999999888 799999999
Q ss_pred ccccCCCCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhh
Q 012233 287 AKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKC 366 (468)
Q Consensus 287 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 366 (468)
+...... .....||+.|+|||++.+.. ++.++|||||||++|+|++|..||.+.+..+.+..+...
T Consensus 165 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~----------- 230 (329)
T PTZ00263 165 AKKVPDR--TFTLCGTPEYLAPEVIQSKG-HGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAG----------- 230 (329)
T ss_pred ceEcCCC--cceecCChhhcCHHHHcCCC-CCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcC-----------
Confidence 9865332 33568999999999997654 899999999999999999999999887766555544331
Q ss_pred cCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCC-----HHHHhCCCCCCCC
Q 012233 367 MNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCT-----ALEACAHPFFDDL 426 (468)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s-----~~ell~hp~f~~~ 426 (468)
... ++..++..+++||.+||+.||.+|++ +.+++.||||+++
T Consensus 231 ------~~~------------~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~~ 277 (329)
T PTZ00263 231 ------RLK------------FPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHGA 277 (329)
T ss_pred ------CcC------------CCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCCC
Confidence 111 22347889999999999999999997 7999999999875
No 48
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=8.1e-47 Score=320.84 Aligned_cols=279 Identities=35% Similarity=0.623 Sum_probs=234.3
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc------chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~ 211 (468)
.|.-.+.||+|.||+||+|++..+++.||+|.+.-+. ....+|+.+|+.+.|.|||++++.. ..+..+-
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvl-----hsdkklt 77 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVL-----HSDKKLT 77 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhh-----ccCceeE
Confidence 4677789999999999999999999999999886443 2346899999999999999999988 4445588
Q ss_pred EEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccC
Q 012233 212 LVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (468)
Q Consensus 212 lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~ 291 (468)
+|+|||..++.. .+...++.++...++.++.|+++||.|+|+ +++.||||||.|+||+.++ ++||+|||+++.+.
T Consensus 78 lvfe~cdqdlkk---yfdslng~~d~~~~rsfmlqllrgl~fchs-hnvlhrdlkpqnllin~ng-elkladfglarafg 152 (292)
T KOG0662|consen 78 LVFEFCDQDLKK---YFDSLNGDLDPEIVRSFMLQLLRGLGFCHS-HNVLHRDLKPQNLLINRNG-ELKLADFGLARAFG 152 (292)
T ss_pred EeHHHhhHHHHH---HHHhcCCcCCHHHHHHHHHHHHhhhhhhhh-hhhhhccCCcceEEeccCC-cEEecccchhhhcC
Confidence 999999987655 455668889999999999999999999997 9999999999999999999 89999999998763
Q ss_pred CCC-CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCC
Q 012233 292 PGE-PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP 369 (468)
Q Consensus 292 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 369 (468)
-.. -....+.|.+|.+|.++.|..-|+...|+||.|||+.|+.. |++.|++.+-.+++..|+..+|.|.++.|..+..
T Consensus 153 ipvrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~ 232 (292)
T KOG0662|consen 153 IPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTK 232 (292)
T ss_pred CceEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCcccc
Confidence 222 12345679999999999999889999999999999999984 9999999999999999999999999998877653
Q ss_pred CCccCCCCcccC-CCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCC
Q 012233 370 NYTEFKFPQIKA-HPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLR 427 (468)
Q Consensus 370 ~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~ 427 (468)
--.-..+|..+. ..|.. +-+.+...-+||++++|..+|.+|++++++++||||.+..
T Consensus 233 lpdyk~yp~ypattswsq-ivp~lns~grdllqkll~cnp~qrisaeaalqhpyf~d~s 290 (292)
T KOG0662|consen 233 LPDYKPYPIYPATTSWSQ-IVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHPYFSDFS 290 (292)
T ss_pred CCCCcccCCccccchHHH-HhhhhcchhHHHHHHHhccCcccccCHHHHhcCccccccC
Confidence 332233333222 22333 3345677789999999999999999999999999998753
No 49
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.8e-46 Score=378.93 Aligned_cols=281 Identities=24% Similarity=0.332 Sum_probs=214.4
Q ss_pred ccceEEeceecccCceEEEEEEEcCCCCEEEEEEeecccchHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEEEee
Q 012233 136 TISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVLE 215 (468)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv~e 215 (468)
..+|.+.+.||+|+||.||+|.+..+++.||||.... ....+|+.+++.|+||||++++++|. ...+.++|||
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~--~~~~~E~~il~~l~HpnIv~~~~~~~-----~~~~~~lv~e 163 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR--GGTATEAHILRAINHPSIIQLKGTFT-----YNKFTCLILP 163 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh--hhhHHHHHHHHhCCCCCCCCEeEEEE-----ECCeeEEEEe
Confidence 3469999999999999999999999999999997543 34568999999999999999999883 3446889999
Q ss_pred cccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCCC--
Q 012233 216 YISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPG-- 293 (468)
Q Consensus 216 ~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~~-- 293 (468)
++.++++..+.. ...+++..++.++.||+.||.|||+ +||+||||||+||||+.++ .+||+|||+++.....
T Consensus 164 ~~~~~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~ylH~-~~IvHrDiKP~NIll~~~~-~vkL~DFG~a~~~~~~~~ 237 (391)
T PHA03212 164 RYKTDLYCYLAA----KRNIAICDILAIERSVLRAIQYLHE-NRIIHRDIKAENIFINHPG-DVCLGDFGAACFPVDINA 237 (391)
T ss_pred cCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCChHhEEEcCCC-CEEEEeCCcccccccccc
Confidence 999887765432 3568899999999999999999998 8999999999999999888 7999999999653221
Q ss_pred CCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCC-------cHHHHHHHHHHhCCCCHHHHhh
Q 012233 294 EPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGES-------GVDQLVEIIKILGTPTREEIKC 366 (468)
Q Consensus 294 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~-------~~~~~~~i~~~~~~~~~~~~~~ 366 (468)
......+||+.|+|||++.+. .++.++|||||||++|||++|..||.... ...++..++...+.++......
T Consensus 238 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~ 316 (391)
T PHA03212 238 NKYYGWAGTIATNAPELLARD-PYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPID 316 (391)
T ss_pred cccccccCccCCCChhhhcCC-CCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcc
Confidence 223356899999999999765 48999999999999999999998875432 3455666777666544221000
Q ss_pred cCCCCc-------cCCCCcc-cCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCCCCCCC
Q 012233 367 MNPNYT-------EFKFPQI-KAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNTC 432 (468)
Q Consensus 367 ~~~~~~-------~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~~~~~~ 432 (468)
...... ....... ....|... ..++.++.+||.+||++||.+|||+.|+|+||||+++..+...
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~~~~~~~~ 388 (391)
T PHA03212 317 AQANLDEIYIGLAKKSSRKPGSRPLWTNL--YELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQDIPDPYPN 388 (391)
T ss_pred hhHHHHHHHHHHHhccCCCCCCCCCHHHH--hhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhccCCCCCCC
Confidence 000000 0000000 00011111 2357789999999999999999999999999999998766443
No 50
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=1e-45 Score=361.10 Aligned_cols=288 Identities=33% Similarity=0.608 Sum_probs=231.8
Q ss_pred ccceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc-----chHHHHHHHHHHcCCCCcccccceeeecCCCCceEE
Q 012233 136 TISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYL 210 (468)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~ 210 (468)
..+|.+.+.||.|+||.||+|.+..+++.||+|.+.... ....+|+.+++.++||||+++++++ ....++
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~-----~~~~~~ 79 (301)
T cd07873 5 LETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDII-----HTEKSL 79 (301)
T ss_pred ccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEE-----ecCCeE
Confidence 346999999999999999999999999999999885332 2345799999999999999999998 444568
Q ss_pred EEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCcccc
Q 012233 211 NLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (468)
Q Consensus 211 ~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~ 290 (468)
++||||+.+++...+.. ....+++..++.++.||+.||.|||+ .||+|+||||+|||++.++ .++|+|||++...
T Consensus 80 ~lv~e~~~~~l~~~l~~---~~~~~~~~~~~~~~~qi~~aL~~lH~-~~i~H~dlkp~Nil~~~~~-~~kl~dfg~~~~~ 154 (301)
T cd07873 80 TLVFEYLDKDLKQYLDD---CGNSINMHNVKLFLFQLLRGLNYCHR-RKVLHRDLKPQNLLINERG-ELKLADFGLARAK 154 (301)
T ss_pred EEEEeccccCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHh-CCeeCCCCCHHHEEECCCC-cEEECcCcchhcc
Confidence 99999999877765433 24568889999999999999999998 8999999999999999887 7999999998754
Q ss_pred CCCC-CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcC-
Q 012233 291 VPGE-PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMN- 368 (468)
Q Consensus 291 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~- 368 (468)
.... ......+++.|+|||++.+...++.++|||||||++|+|++|++||...+..+.+..+...++.+....+..+.
T Consensus 155 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (301)
T cd07873 155 SIPTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILS 234 (301)
T ss_pred CCCCCcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhc
Confidence 3222 22345678999999998766668899999999999999999999999988888888888888877766554321
Q ss_pred -CCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCCCCCCCCC
Q 012233 369 -PNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNTCLP 434 (468)
Q Consensus 369 -~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~~~~~~~~ 434 (468)
..+....++....... ......+++++++||.+||+.||.+|||+.|+++||||+.+.+..+.+|
T Consensus 235 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~~~~~~~~~ 300 (301)
T cd07873 235 NEEFKSYNYPKYRADCL-HNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCLGERIHKLP 300 (301)
T ss_pred cccccccccCccccccH-HhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccccchhhcCC
Confidence 1122222332211111 1233568899999999999999999999999999999999887776655
No 51
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=3.1e-46 Score=375.84 Aligned_cols=284 Identities=35% Similarity=0.582 Sum_probs=224.7
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeecc------cchHHHHHHHHHHcCCCCcccccceeeecCCCCceEEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~------~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~ 211 (468)
+|.+.+.||+|+||.||+|.+..+|+.||||++... .....+|+.+++.++||||+++++++..........+|
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 378889999999999999999999999999988542 12345799999999999999999988544322223688
Q ss_pred EEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccC
Q 012233 212 LVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (468)
Q Consensus 212 lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~ 291 (468)
+||||+.+++...+.. ...+++..++.++.||+.||.|||+ .||+||||||+|||++.++ .+||+|||++....
T Consensus 81 lv~e~~~~~l~~~~~~----~~~l~~~~~~~~~~qi~~aL~~LH~-~~ivH~dlkp~Nili~~~~-~~kL~Dfg~a~~~~ 154 (372)
T cd07853 81 VVTELMQSDLHKIIVS----PQPLSSDHVKVFLYQILRGLKYLHS-AGILHRDIKPGNLLVNSNC-VLKICDFGLARVEE 154 (372)
T ss_pred EEeeccccCHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHh-CCeeCCCCChHHEEECCCC-CEEeccccceeecc
Confidence 9999999887765432 4568999999999999999999998 8999999999999999888 79999999997653
Q ss_pred CCC--CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCC
Q 012233 292 PGE--PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP 369 (468)
Q Consensus 292 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 369 (468)
... ......+++.|+|||++.+...++.++|||||||++|||++|++||.+.+..+++..+...++.+....+.....
T Consensus 155 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~ 234 (372)
T cd07853 155 PDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACE 234 (372)
T ss_pred cCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhH
Confidence 322 223456789999999998766689999999999999999999999999999999999999999888765433211
Q ss_pred CCccCCC--Cc-ccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCC
Q 012233 370 NYTEFKF--PQ-IKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLR 427 (468)
Q Consensus 370 ~~~~~~~--~~-~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~ 427 (468)
....... +. .+.......+....++++.+||.+||+.||.+|||+.|+|.||||+..+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~ 295 (372)
T cd07853 235 GARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDEGR 295 (372)
T ss_pred HHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCCCc
Confidence 0000000 00 0000001113345789999999999999999999999999999999854
No 52
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=6.3e-46 Score=369.43 Aligned_cols=285 Identities=34% Similarity=0.607 Sum_probs=225.4
Q ss_pred cceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc------chHHHHHHHHHHcCCCCcccccceeeecCC-CCceE
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTE-KDELY 209 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~-~~~~~ 209 (468)
.+|.+.+.||.|+||.||+|.+..+++.||||++.... ....+|+.+++.++||||++++++|..... .....
T Consensus 15 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 94 (343)
T cd07878 15 ERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFNE 94 (343)
T ss_pred hhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccCc
Confidence 36999999999999999999999999999999885432 223479999999999999999998743321 22234
Q ss_pred EEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccc
Q 012233 210 LNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (468)
Q Consensus 210 ~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~ 289 (468)
.|++|+++++.+..... ...+++..++.++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||+++.
T Consensus 95 ~~~~~~~~~~~l~~~~~-----~~~l~~~~~~~i~~qi~~aL~~LH~-~~ivHrdikp~Nil~~~~~-~~kl~Dfg~~~~ 167 (343)
T cd07878 95 VYLVTNLMGADLNNIVK-----CQKLSDEHVQFLIYQLLRGLKYIHS-AGIIHRDLKPSNVAVNEDC-ELRILDFGLARQ 167 (343)
T ss_pred EEEEeecCCCCHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH-CCeecccCChhhEEECCCC-CEEEcCCcccee
Confidence 78999999877665443 3568999999999999999999998 8999999999999999888 799999999986
Q ss_pred cCCCCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCC
Q 012233 290 LVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP 369 (468)
Q Consensus 290 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 369 (468)
... ......||+.|+|||++.+...++.++|||||||++|+|++|+.||.+.+..+.+..+....+.+..........
T Consensus 168 ~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (343)
T cd07878 168 ADD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISS 245 (343)
T ss_pred cCC--CcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcch
Confidence 533 234567899999999997756689999999999999999999999999888888888888777776654433221
Q ss_pred CCccC---CCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCCCCCC
Q 012233 370 NYTEF---KFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNT 431 (468)
Q Consensus 370 ~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~~~~~ 431 (468)
..... .++......+.. +...+++.+.+||.+||+.||.+|||+.|+|.||||.....+..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~~~~~~~ 309 (343)
T cd07878 246 EHARKYIQSLPHMPQQDLKK-IFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQYHDPED 309 (343)
T ss_pred hhHHHHhhccccccchhHHH-hccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhccCCCcc
Confidence 11110 011111111111 22346788999999999999999999999999999998776553
No 53
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=2.7e-46 Score=369.04 Aligned_cols=245 Identities=28% Similarity=0.454 Sum_probs=201.4
Q ss_pred ceecccCceEEEEEEEcCCCCEEEEEEeeccc-------chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEEEee
Q 012233 143 RVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVLE 215 (468)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv~e 215 (468)
++||+|+||.||+|.+..+|+.||||++.... ....+|+.+++.++||||++++++| ....++|+|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~-----~~~~~~~lv~e 75 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSF-----QTHDRLCFVME 75 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEE-----EcCCEEEEEEe
Confidence 46999999999999999999999999986432 2234689999999999999999888 44557899999
Q ss_pred cccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCC-CC
Q 012233 216 YISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP-GE 294 (468)
Q Consensus 216 ~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~-~~ 294 (468)
|+.++.+.... .....+++..++.++.||+.||+|||+ +||+||||||+|||++.++ .+||+|||+++.... ..
T Consensus 76 ~~~~~~L~~~l---~~~~~~~~~~~~~~~~qi~~~L~~lH~-~~ivHrDlkp~NIll~~~~-~~kl~DfG~a~~~~~~~~ 150 (323)
T cd05571 76 YANGGELFFHL---SRERVFSEDRARFYGAEIVSALGYLHS-CDVVYRDLKLENLMLDKDG-HIKITDFGLCKEGISDGA 150 (323)
T ss_pred CCCCCcHHHHH---HHcCCCCHHHHHHHHHHHHHHHHHHHh-CCeEeCCCCHHHEEECCCC-CEEEeeCCCCcccccCCC
Confidence 99976553222 224568999999999999999999998 8999999999999999888 799999999875422 22
Q ss_pred CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCCccC
Q 012233 295 PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEF 374 (468)
Q Consensus 295 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 374 (468)
.....+||+.|+|||++.+. .++.++|||||||++|||++|+.||.+.+.......+.. ...
T Consensus 151 ~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~-----------------~~~ 212 (323)
T cd05571 151 TMKTFCGTPEYLAPEVLEDN-DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM-----------------EEI 212 (323)
T ss_pred cccceecCccccChhhhcCC-CCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHc-----------------CCC
Confidence 33456799999999999765 489999999999999999999999987765544443322 111
Q ss_pred CCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCC-----CHHHHhCCCCCCCCC
Q 012233 375 KFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRC-----TALEACAHPFFDDLR 427 (468)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~-----s~~ell~hp~f~~~~ 427 (468)
. ++..+++++.+||.+||+.||.+|| ++.++++||||+.+.
T Consensus 213 ~------------~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~~~ 258 (323)
T cd05571 213 R------------FPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFASIN 258 (323)
T ss_pred C------------CCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcCCCC
Confidence 1 3345889999999999999999999 899999999998853
No 54
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=5.3e-46 Score=365.73 Aligned_cols=247 Identities=31% Similarity=0.451 Sum_probs=202.7
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCE-EEEEEeeccc------chHHHHHHHHHHcCCCCcccccceeeecCCCCceEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDS-VAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYL 210 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~-vaiK~~~~~~------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~ 210 (468)
...+.+.||.|+||+||+|.+ .|.. ||+|++.... ..+.+|+.+|.+++|||||++++++..... .+
T Consensus 42 ~l~~~~~iG~G~~g~V~~~~~--~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~----~~ 115 (362)
T KOG0192|consen 42 ELPIEEVLGSGSFGTVYKGKW--RGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPG----SL 115 (362)
T ss_pred HhhhhhhcccCCceeEEEEEe--CCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC----ce
Confidence 345566799999999999999 5667 9999986532 356789999999999999999999843321 48
Q ss_pred EEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCC-ccccCCCCCCeeecCCCCcEEEeeecCccc
Q 012233 211 NLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVG-VCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (468)
Q Consensus 211 ~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~g-ivHrDlkp~NILl~~~~~~vkL~DFG~a~~ 289 (468)
+|||||+++|.|..+.+.. ....+++..+..++.||++||.|||+ ++ ||||||||+||||+.+...+||+|||+++.
T Consensus 116 ~iVtEy~~~GsL~~~l~~~-~~~~l~~~~~l~~aldiArGm~YLH~-~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~ 193 (362)
T KOG0192|consen 116 CIVTEYMPGGSLSVLLHKK-RKRKLPLKVRLRIALDIARGMEYLHS-EGPIIHRDLKSDNILVDLKGKTLKIADFGLSRE 193 (362)
T ss_pred EEEEEeCCCCcHHHHHhhc-ccCCCCHHHHHHHHHHHHHHHHHHhc-CCCeeecccChhhEEEcCCCCEEEECCCcccee
Confidence 8999999988776555432 46789999999999999999999998 89 999999999999998854699999999987
Q ss_pred cCCC-CCCccccccCCccccccccC-CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhc
Q 012233 290 LVPG-EPNISYICSRYYRAPELIFG-ATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCM 367 (468)
Q Consensus 290 ~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 367 (468)
.... .......||+.|||||++.+ ...|+.++||||||+++|||+||..||.+....+....+......|.
T Consensus 194 ~~~~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp~------- 266 (362)
T KOG0192|consen 194 KVISKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGLRPP------- 266 (362)
T ss_pred eccccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCC-------
Confidence 6544 33444789999999999975 34599999999999999999999999999888555555544222221
Q ss_pred CCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 368 NPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
++...++.+.+||.+||..||.+||+..+++.
T Consensus 267 --------------------~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~ 298 (362)
T KOG0192|consen 267 --------------------IPKECPPHLSSLMERCWLVDPSRRPSFLEIVS 298 (362)
T ss_pred --------------------CCccCCHHHHHHHHHhCCCCCCcCCCHHHHHH
Confidence 33457899999999999999999999988764
No 55
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=4.7e-46 Score=373.39 Aligned_cols=254 Identities=30% Similarity=0.476 Sum_probs=206.0
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc-------chHHHHHHHHHHcCCCCcccccceeeecCCCCceEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYL 210 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~ 210 (468)
+|.+.+.||+|+||.||+|.+..+|+.||||++.... ....+|+.+++.++||||++++++| .+..++
T Consensus 2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~-----~~~~~~ 76 (364)
T cd05599 2 DFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSF-----QDENYL 76 (364)
T ss_pred CceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEE-----EcCCeE
Confidence 5999999999999999999999999999999986432 2345799999999999999999988 455579
Q ss_pred EEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCcccc
Q 012233 211 NLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (468)
Q Consensus 211 ~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~ 290 (468)
||||||+.++.+.... .....+++..++.++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||++..+
T Consensus 77 ~lv~E~~~~g~L~~~l---~~~~~l~~~~~~~~~~qi~~aL~~lH~-~~ivH~Dlkp~NIl~~~~~-~~kl~Dfg~~~~~ 151 (364)
T cd05599 77 YLIMEYLPGGDMMTLL---MKKDTFTEEETRFYIAETILAIDSIHK-LGYIHRDIKPDNLLLDAKG-HIKLSDFGLCTGL 151 (364)
T ss_pred EEEECCCCCcHHHHHH---HHcCCCCHHHHHHHHHHHHHHHHHHHH-CCeEeccCCHHHeEECCCC-CEEEeecccceec
Confidence 9999999876544322 224568999999999999999999998 8999999999999999888 7999999998754
Q ss_pred CCCC---------------------------------------CCccccccCCccccccccCCCCCCcchhHHHHHHHHH
Q 012233 291 VPGE---------------------------------------PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLA 331 (468)
Q Consensus 291 ~~~~---------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ 331 (468)
.... .....+||+.|+|||++.+. .++.++|||||||++|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~ 230 (364)
T cd05599 152 KKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQT-GYNKECDWWSLGVIMY 230 (364)
T ss_pred cccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCC-CCCCeeeeecchhHHH
Confidence 2211 01134689999999998654 4899999999999999
Q ss_pred HHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCC
Q 012233 332 ELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLR 411 (468)
Q Consensus 332 ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R 411 (468)
||++|..||.+.+..+.+..+.... ..+.++. ...+++++++||.+||. +|.+|
T Consensus 231 el~~G~~Pf~~~~~~~~~~~i~~~~---------------~~~~~~~----------~~~~s~~~~~li~~ll~-~p~~R 284 (364)
T cd05599 231 EMLVGYPPFCSDNPQETYRKIINWK---------------ETLQFPD----------EVPLSPEAKDLIKRLCC-EAERR 284 (364)
T ss_pred HhhcCCCCCCCCCHHHHHHHHHcCC---------------CccCCCC----------CCCCCHHHHHHHHHHcc-CHhhc
Confidence 9999999999887766655554310 0111111 11368999999999997 99999
Q ss_pred CC---HHHHhCCCCCCCCCC
Q 012233 412 CT---ALEACAHPFFDDLRD 428 (468)
Q Consensus 412 ~s---~~ell~hp~f~~~~~ 428 (468)
++ +.+++.||||+.+..
T Consensus 285 ~~~~~~~~ll~h~~~~~~~~ 304 (364)
T cd05599 285 LGNNGVNEIKSHPFFKGVDW 304 (364)
T ss_pred CCCCCHHHHhcCCCcCCCCH
Confidence 98 999999999998754
No 56
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=3.7e-45 Score=359.75 Aligned_cols=277 Identities=31% Similarity=0.529 Sum_probs=208.8
Q ss_pred eceecccCceEEEEEEEc--CCCCEEEEEEeeccc--chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEEEeecc
Q 012233 142 ERVVGTGSFGVVFQAKCL--ETGDSVAIKKVLQDK--RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVLEYI 217 (468)
Q Consensus 142 ~~~lG~G~fg~Vy~~~~~--~~g~~vaiK~~~~~~--~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv~e~~ 217 (468)
++.||+|+||.||+|.++ .++..||+|.+.... ....+|+.+|+.++||||++++++|... ....+|+||||+
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~---~~~~~~lv~e~~ 82 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLSH---ADRKVWLLFDYA 82 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCCcHHHHHHHHHHHhcCCCCCcceeeeEecC---CCcEEEEEEecc
Confidence 457999999999999975 467899999886542 3456799999999999999999988543 234688999999
Q ss_pred cchHHHHHhhhhh-----cCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeec----CCCCcEEEeeecCcc
Q 012233 218 SETVYRVSKHYTR-----MNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVN----PHTHQLKICDFGSAK 288 (468)
Q Consensus 218 ~~~ll~~~~~~~~-----~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~----~~~~~vkL~DFG~a~ 288 (468)
++++...+..... ....+++..++.++.||+.||.|||+ .||+||||||+|||++ .++ .+||+|||+++
T Consensus 83 ~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~-~~ivHrDlkp~Nil~~~~~~~~~-~~kl~DfG~a~ 160 (317)
T cd07868 83 EHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA-NWVLHRDLKPANILVMGEGPERG-RVKIADMGFAR 160 (317)
T ss_pred CCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHh-CCEEcCCCCHHHEEEecCCCCcC-cEEEeecCcee
Confidence 9988776543211 12358899999999999999999998 8999999999999994 334 79999999997
Q ss_pred ccCCCC----CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCc---------HHHHHHHHHH
Q 012233 289 MLVPGE----PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESG---------VDQLVEIIKI 355 (468)
Q Consensus 289 ~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~---------~~~~~~i~~~ 355 (468)
...... ......||+.|+|||++.+...++.++|||||||++|+|++|++||..... .+++..++..
T Consensus 161 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 240 (317)
T cd07868 161 LFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNV 240 (317)
T ss_pred ccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHh
Confidence 654322 223467899999999998766689999999999999999999999975432 3567778888
Q ss_pred hCCCCHHHHhhcCCCC---------ccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCC
Q 012233 356 LGTPTREEIKCMNPNY---------TEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (468)
Q Consensus 356 ~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f 423 (468)
++.|....+....... ....+.......+........+.++.+||.+||++||.+|||++|+|+||||
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07868 241 MGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF 317 (317)
T ss_pred cCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 8877766554322100 0000000000000011112346789999999999999999999999999998
No 57
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=1.3e-45 Score=369.96 Aligned_cols=254 Identities=26% Similarity=0.395 Sum_probs=203.8
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc-------chHHHHHHHHHHcCCCCcccccceeeecCCCCceEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYL 210 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~ 210 (468)
+|.+.+.||+|+||+||+|.+..+++.||||++.+.. ....+|+.+++.++|+||+++++++ .+..++
T Consensus 2 ~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~-----~~~~~~ 76 (363)
T cd05628 2 DFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSF-----QDKLNL 76 (363)
T ss_pred CceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEE-----ecCCeE
Confidence 5999999999999999999999999999999986532 2345699999999999999999988 455578
Q ss_pred EEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCcccc
Q 012233 211 NLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (468)
Q Consensus 211 ~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~ 290 (468)
||||||++++.+.... .....+++..++.++.||+.||.|||+ +||+||||||+||||+.++ .+||+|||+++..
T Consensus 77 ~lv~E~~~gg~L~~~l---~~~~~l~~~~~~~~~~qi~~aL~~lH~-~givHrDlKp~NILi~~~~-~vkL~DFGla~~~ 151 (363)
T cd05628 77 YLIMEFLPGGDMMTLL---MKKDTLTEEETQFYIAETVLAIDSIHQ-LGFIHRDIKPDNLLLDSKG-HVKLSDFGLCTGL 151 (363)
T ss_pred EEEEcCCCCCcHHHHH---HhcCCCCHHHHHHHHHHHHHHHHHHHh-CCeEecCCCHHHeEECCCC-CEEEeeccCcccc
Confidence 9999999876443222 124568999999999999999999998 8999999999999999888 7999999998754
Q ss_pred CCCC------------------------------------CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHH
Q 012233 291 VPGE------------------------------------PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELL 334 (468)
Q Consensus 291 ~~~~------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell 334 (468)
.... .....+||+.|+|||++.+. .++.++|||||||++|||+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~-~~~~~~DvwSlGvil~ell 230 (363)
T cd05628 152 KKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQT-GYNKLCDWWSLGVIMYEML 230 (363)
T ss_pred cccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCC-CCCCchhhhhhHHHHHHHH
Confidence 3211 01245799999999999765 4899999999999999999
Q ss_pred hCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCC---CC
Q 012233 335 LGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPS---LR 411 (468)
Q Consensus 335 ~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~---~R 411 (468)
+|+.||.+.+..+.+.++..... ...+|. ...+++++++||.+|+. +|. .|
T Consensus 231 ~G~~Pf~~~~~~~~~~~i~~~~~---------------~~~~p~----------~~~~s~~~~~li~~l~~-~~~~r~~r 284 (363)
T cd05628 231 IGYPPFCSETPQETYKKVMNWKE---------------TLIFPP----------EVPISEKAKDLILRFCC-EWEHRIGA 284 (363)
T ss_pred hCCCCCCCCCHHHHHHHHHcCcC---------------cccCCC----------cCCCCHHHHHHHHHHcC-ChhhcCCC
Confidence 99999998877776666554110 111111 01368899999999775 444 46
Q ss_pred CCHHHHhCCCCCCCCCC
Q 012233 412 CTALEACAHPFFDDLRD 428 (468)
Q Consensus 412 ~s~~ell~hp~f~~~~~ 428 (468)
|+++|+++||||+++.-
T Consensus 285 ~~~~ei~~hp~f~~~~~ 301 (363)
T cd05628 285 PGVEEIKTNPFFEGVDW 301 (363)
T ss_pred CCHHHHhCCCCCCCCCH
Confidence 89999999999998643
No 58
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=1.2e-45 Score=366.76 Aligned_cols=252 Identities=30% Similarity=0.446 Sum_probs=206.9
Q ss_pred CcccceEEeceecccCceEEEEEEEcCCC-CEEEEEEeeccc-------chHHHHHHHHHHcCCCCcccccceeeecCCC
Q 012233 134 KQTISYMAERVVGTGSFGVVFQAKCLETG-DSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEK 205 (468)
Q Consensus 134 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~g-~~vaiK~~~~~~-------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 205 (468)
....+|.+.+.||+|+||.||+|.+..++ ..||+|.+.... ....+|+.+++.++||||+++++++ .
T Consensus 27 ~~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~-----~ 101 (340)
T PTZ00426 27 MKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSF-----K 101 (340)
T ss_pred CChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEE-----E
Confidence 34457999999999999999999976655 689999885431 2345799999999999999999998 4
Q ss_pred CceEEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeec
Q 012233 206 DELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFG 285 (468)
Q Consensus 206 ~~~~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG 285 (468)
+..++|+||||+.++.+.... .....+++..+..++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||
T Consensus 102 ~~~~~~lv~Ey~~~g~L~~~i---~~~~~~~~~~~~~~~~qi~~aL~~LH~-~~ivHrDLkp~NILl~~~~-~ikL~DFG 176 (340)
T PTZ00426 102 DESYLYLVLEFVIGGEFFTFL---RRNKRFPNDVGCFYAAQIVLIFEYLQS-LNIVYRDLKPENLLLDKDG-FIKMTDFG 176 (340)
T ss_pred eCCEEEEEEeCCCCCcHHHHH---HHcCCCCHHHHHHHHHHHHHHHHHHHH-CCeEccCCCHHHEEECCCC-CEEEecCC
Confidence 445689999999876443221 224568999999999999999999998 8999999999999999888 79999999
Q ss_pred CccccCCCCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHh
Q 012233 286 SAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIK 365 (468)
Q Consensus 286 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 365 (468)
++..... ......||+.|+|||++.+.. ++.++|||||||++|||++|..||.+.+....+..+...
T Consensus 177 ~a~~~~~--~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~---------- 243 (340)
T PTZ00426 177 FAKVVDT--RTYTLCGTPEYIAPEILLNVG-HGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEG---------- 243 (340)
T ss_pred CCeecCC--CcceecCChhhcCHHHHhCCC-CCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcC----------
Confidence 9976532 234568999999999997654 899999999999999999999999887766555554431
Q ss_pred hcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCC-----CHHHHhCCCCCCCCC
Q 012233 366 CMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRC-----TALEACAHPFFDDLR 427 (468)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~-----s~~ell~hp~f~~~~ 427 (468)
... ++..+++.+.++|++||+.||.+|+ ++++++.||||+++.
T Consensus 244 -------~~~------------~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~~~ 291 (340)
T PTZ00426 244 -------IIY------------FPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGNID 291 (340)
T ss_pred -------CCC------------CCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcCCCC
Confidence 111 2345788999999999999999996 899999999999864
No 59
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.4e-46 Score=354.55 Aligned_cols=247 Identities=27% Similarity=0.453 Sum_probs=217.6
Q ss_pred cceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc-------chHHHHHHHHHHcCCCCcccccceeeecCCCCceE
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELY 209 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~ 209 (468)
.+|.+.+.||+|.||+|-+|.....|+.||||.|.++. ....+|++||..|+||||+.+|.+| ++...
T Consensus 53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVF-----ENkdK 127 (668)
T KOG0611|consen 53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVF-----ENKDK 127 (668)
T ss_pred hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhh-----cCCce
Confidence 46999999999999999999999999999999886553 2346899999999999999999999 55556
Q ss_pred EEEEeecccch-HHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCcc
Q 012233 210 LNLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAK 288 (468)
Q Consensus 210 ~~lv~e~~~~~-ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~ 288 (468)
+.|||||..+| |++.+ ...+.+++.+++.+++||+.|+.|+|. ++++|||||.+|||+|.++ ++||+|||++.
T Consensus 128 IvivMEYaS~GeLYDYi----Ser~~LsErEaRhfFRQIvSAVhYCHk-nrVvHRDLKLENILLD~N~-NiKIADFGLSN 201 (668)
T KOG0611|consen 128 IVIVMEYASGGELYDYI----SERGSLSEREARHFFRQIVSAVHYCHK-NRVVHRDLKLENILLDQNN-NIKIADFGLSN 201 (668)
T ss_pred EEEEEEecCCccHHHHH----HHhccccHHHHHHHHHHHHHHHHHHhh-ccceecccchhheeecCCC-Ceeeeccchhh
Confidence 89999999865 44433 335779999999999999999999998 9999999999999999988 79999999999
Q ss_pred ccCCCCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcC
Q 012233 289 MLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMN 368 (468)
Q Consensus 289 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 368 (468)
.+.......++||+|-|.+||++.|.+.-++.+|.|||||+||.|+.|..||.+.+....+.+|...
T Consensus 202 ly~~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~G------------- 268 (668)
T KOG0611|consen 202 LYADKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRG------------- 268 (668)
T ss_pred hhccccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcc-------------
Confidence 8888888889999999999999999887789999999999999999999999998877777776552
Q ss_pred CCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCC
Q 012233 369 PNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFD 424 (468)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~ 424 (468)
.+ +.+.-+.++.-||+.||-.||.+|.|++++..|-|..
T Consensus 269 ----aY-------------rEP~~PSdA~gLIRwmLmVNP~RRATieDiAsHWWvN 307 (668)
T KOG0611|consen 269 ----AY-------------REPETPSDASGLIRWMLMVNPERRATIEDIASHWWVN 307 (668)
T ss_pred ----cc-------------cCCCCCchHHHHHHHHHhcCcccchhHHHHhhhheee
Confidence 11 1234577899999999999999999999999998875
No 60
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=1.5e-45 Score=365.30 Aligned_cols=257 Identities=29% Similarity=0.460 Sum_probs=209.3
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc-------chHHHHHHHHHHcCCCCcccccceeeecCCCCceEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYL 210 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~ 210 (468)
+|.+.+.||+|+||.||+|.+..+++.||||++.... ....+|+.+++.++||||+++++++ .+..++
T Consensus 2 ~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~-----~~~~~~ 76 (333)
T cd05600 2 DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAF-----QDDEYL 76 (333)
T ss_pred CcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEE-----EcCCEE
Confidence 5999999999999999999999999999999986432 2345699999999999999999888 445578
Q ss_pred EEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCcccc
Q 012233 211 NLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (468)
Q Consensus 211 ~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~ 290 (468)
||||||+.++.+.... .....+++..++.++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||++...
T Consensus 77 ~lv~e~~~g~~L~~~l---~~~~~l~~~~~~~~~~qi~~~l~~lH~-~~ivH~dlkp~Nil~~~~~-~~kL~Dfg~a~~~ 151 (333)
T cd05600 77 YLAMEYVPGGDFRTLL---NNLGVLSEDHARFYMAEMFEAVDALHE-LGYIHRDLKPENFLIDASG-HIKLTDFGLSKGI 151 (333)
T ss_pred EEEEeCCCCCCHHHHH---HHcCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCCHHHEEECCCC-CEEEEeCcCCccc
Confidence 9999999876544322 224568899999999999999999998 8999999999999999888 7999999999765
Q ss_pred CCCCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCC
Q 012233 291 VPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPN 370 (468)
Q Consensus 291 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 370 (468)
.. ......||+.|+|||++.+. .++.++|||||||++|||++|..||...+..+.+..+......
T Consensus 152 ~~--~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~------------ 216 (333)
T cd05600 152 VT--YANSVVGSPDYMAPEVLRGK-GYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKET------------ 216 (333)
T ss_pred cc--ccCCcccCccccChhHhcCC-CCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhcccc------------
Confidence 33 33456899999999999766 5899999999999999999999999987776665554431100
Q ss_pred CccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCCC
Q 012233 371 YTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRD 428 (468)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~~ 428 (468)
...+... .....+++++.+||.+||..+|.+|+++.+++.||||+++..
T Consensus 217 ---~~~~~~~------~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~~~~~~~ 265 (333)
T cd05600 217 ---LQRPVYD------DPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNHPFFKEVDW 265 (333)
T ss_pred ---ccCCCCC------ccccccCHHHHHHHHHHhhChhhhcCCHHHHHhCcccCCCCH
Confidence 0001000 001247899999999999999999999999999999998754
No 61
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=1.7e-45 Score=371.19 Aligned_cols=253 Identities=28% Similarity=0.462 Sum_probs=202.8
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc-------chHHHHHHHHHHcCCCCcccccceeeecCCCCceEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYL 210 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~ 210 (468)
+|.+.+.||+|+||.||+|.+..+|+.||||++.+.. ....+|+.+++.++||||++++++| .+..++
T Consensus 2 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~-----~~~~~~ 76 (377)
T cd05629 2 DFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSF-----QDAQYL 76 (377)
T ss_pred CceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEE-----EcCCee
Confidence 5999999999999999999999999999999885432 2345699999999999999999988 455579
Q ss_pred EEEeecccchHH-HHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccc
Q 012233 211 NLVLEYISETVY-RVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (468)
Q Consensus 211 ~lv~e~~~~~ll-~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~ 289 (468)
||||||++++.+ ..+. ....+++..++.++.|++.||.|||+ +||+||||||+|||++.++ .+||+|||+++.
T Consensus 77 ~lv~E~~~gg~L~~~l~----~~~~~~~~~~~~~~~ql~~aL~~LH~-~givHrDlkp~NIll~~~~-~~kl~DfGla~~ 150 (377)
T cd05629 77 YLIMEFLPGGDLMTMLI----KYDTFSEDVTRFYMAECVLAIEAVHK-LGFIHRDIKPDNILIDRGG-HIKLSDFGLSTG 150 (377)
T ss_pred EEEEeCCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHh-CCeeccCCCHHHEEECCCC-CEEEeecccccc
Confidence 999999986544 3332 24568899999999999999999998 8999999999999999888 799999999863
Q ss_pred cCCCC------------------------------------------------CCccccccCCccccccccCCCCCCcch
Q 012233 290 LVPGE------------------------------------------------PNISYICSRYYRAPELIFGATEYTTAI 321 (468)
Q Consensus 290 ~~~~~------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~ 321 (468)
..... .....+||+.|+|||++.+. .++.++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~ 229 (377)
T cd05629 151 FHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQ-GYGQEC 229 (377)
T ss_pred cccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccC-CCCCce
Confidence 31100 00124689999999999765 489999
Q ss_pred hHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHH
Q 012233 322 DMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVS 401 (468)
Q Consensus 322 DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 401 (468)
|||||||++|||++|.+||.+.+..+.+..+.... ....+|. ...++.++++||.
T Consensus 230 DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~---------------~~~~~p~----------~~~~s~~~~dli~ 284 (377)
T cd05629 230 DWWSLGAIMFECLIGWPPFCSENSHETYRKIINWR---------------ETLYFPD----------DIHLSVEAEDLIR 284 (377)
T ss_pred eeEecchhhhhhhcCCCCCCCCCHHHHHHHHHccC---------------CccCCCC----------CCCCCHHHHHHHH
Confidence 99999999999999999998877666655554310 0111111 1247889999999
Q ss_pred HhcccCCCCC---CCHHHHhCCCCCCCCCC
Q 012233 402 RLLQYSPSLR---CTALEACAHPFFDDLRD 428 (468)
Q Consensus 402 ~~L~~dP~~R---~s~~ell~hp~f~~~~~ 428 (468)
+||. +|.+| +++.+++.||||+++..
T Consensus 285 ~lL~-~~~~r~~r~~~~~~l~hp~~~~~~~ 313 (377)
T cd05629 285 RLIT-NAENRLGRGGAHEIKSHPFFRGVDW 313 (377)
T ss_pred HHhc-CHhhcCCCCCHHHHhcCCCcCCCCH
Confidence 9998 67665 59999999999997643
No 62
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=1.7e-45 Score=367.29 Aligned_cols=257 Identities=31% Similarity=0.501 Sum_probs=210.5
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeecc-------cchHHHHHHHHHHcCCCCcccccceeeecCCCCceEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD-------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYL 210 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~-------~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~ 210 (468)
+|.+.+.||+|+||.||+|.+..+|+.||||++... .....+|+.++..++||||+++++++ .+..++
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~~ 76 (350)
T cd05573 2 DFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSF-----QDEEHL 76 (350)
T ss_pred CceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhhe-----ecCCeE
Confidence 599999999999999999999999999999998643 22345799999999999999999988 455579
Q ss_pred EEEeecccchHH-HHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccc
Q 012233 211 NLVLEYISETVY-RVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (468)
Q Consensus 211 ~lv~e~~~~~ll-~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~ 289 (468)
|+||||+.++.+ ..+.. ...+++..++.++.||+.||.|||+ +||+||||||+||||+.++ .+||+|||++..
T Consensus 77 ~lv~e~~~~~~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH~-~giiH~Dlkp~NIll~~~~-~~kL~Dfg~~~~ 150 (350)
T cd05573 77 YLVMEYMPGGDLMNLLIR----KDVFPEETARFYIAELVLALDSVHK-LGFIHRDIKPDNILIDADG-HIKLADFGLCKK 150 (350)
T ss_pred EEEEcCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHH-CCeeccCCCHHHeEECCCC-CEEeecCCCCcc
Confidence 999999986544 33322 3578999999999999999999998 9999999999999999888 799999999976
Q ss_pred cCCCC------------------------------CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCC
Q 012233 290 LVPGE------------------------------PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPL 339 (468)
Q Consensus 290 ~~~~~------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~p 339 (468)
..... ......||+.|+|||++.+. .++.++|||||||++|||++|+.|
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~ell~g~~P 229 (350)
T cd05573 151 MNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGT-PYGLECDWWSLGVILYEMLYGFPP 229 (350)
T ss_pred CcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCC-CCCCceeeEecchhhhhhccCCCC
Confidence 54332 22345789999999999765 589999999999999999999999
Q ss_pred CCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCC-HHHHh
Q 012233 340 FPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCT-ALEAC 418 (468)
Q Consensus 340 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s-~~ell 418 (468)
|...+..+....+.... ....+|. ...+++++.+||.+||. ||.+|++ +.+++
T Consensus 230 f~~~~~~~~~~~i~~~~---------------~~~~~p~----------~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll 283 (350)
T cd05573 230 FYSDTLQETYNKIINWK---------------ESLRFPP----------DPPVSPEAIDLICRLLC-DPEDRLGSFEEIK 283 (350)
T ss_pred CCCCCHHHHHHHHhccC---------------CcccCCC----------CCCCCHHHHHHHHHHcc-ChhhcCCCHHHHh
Confidence 99887666555554311 0111111 12268999999999998 9999999 99999
Q ss_pred CCCCCCCCCCCCCC
Q 012233 419 AHPFFDDLRDPNTC 432 (468)
Q Consensus 419 ~hp~f~~~~~~~~~ 432 (468)
.||||+++......
T Consensus 284 ~hp~~~~~~~~~~~ 297 (350)
T cd05573 284 SHPFFKGIDWENLR 297 (350)
T ss_pred cCCCcCCCCHHHHh
Confidence 99999987665444
No 63
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=1.1e-44 Score=350.48 Aligned_cols=276 Identities=34% Similarity=0.539 Sum_probs=217.9
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc------chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~ 211 (468)
+|.+.+.||+|+||.||+|.+..+|+.||+|.+.... ....+|+.+++.++||||+++++++ .+..+++
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~-----~~~~~~~ 75 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVL-----HSDKKLT 75 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHh-----ccCCceE
Confidence 4889999999999999999999999999999885421 2345799999999999999999998 4555689
Q ss_pred EEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccC
Q 012233 212 LVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (468)
Q Consensus 212 lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~ 291 (468)
+|+||++++++..+.. ....+++..++.++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||++....
T Consensus 76 lv~e~~~~~l~~~~~~---~~~~~~~~~~~~~~~qi~~al~~LH~-~~i~H~dl~~~nil~~~~~-~~~l~dfg~~~~~~ 150 (284)
T cd07839 76 LVFEYCDQDLKKYFDS---CNGDIDPEIVKSFMFQLLKGLAFCHS-HNVLHRDLKPQNLLINKNG-ELKLADFGLARAFG 150 (284)
T ss_pred EEEecCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHH-CCEecCCCCHHHEEEcCCC-cEEECccchhhccC
Confidence 9999999887765432 24568999999999999999999998 8999999999999999887 79999999987653
Q ss_pred CCC-CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCC-CCCCcHHHHHHHHHHhCCCCHHHHhhcCC
Q 012233 292 PGE-PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLF-PGESGVDQLVEIIKILGTPTREEIKCMNP 369 (468)
Q Consensus 292 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 369 (468)
... ......+++.|+|||++.+...++.++|||||||++|+|++|..|| .+.+..+.+..+...++.+....+.....
T Consensus 151 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (284)
T cd07839 151 IPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSK 230 (284)
T ss_pred CCCCCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhh
Confidence 322 2234567899999999877666899999999999999999988774 55666677777777777766554433221
Q ss_pred CCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCC
Q 012233 370 NYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (468)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f 423 (468)
......++............+.+++++.+||.+||+.||.+|||+.+++.||||
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f 284 (284)
T cd07839 231 LPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF 284 (284)
T ss_pred cccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence 111111222111111122335688999999999999999999999999999998
No 64
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=6.6e-45 Score=365.60 Aligned_cols=257 Identities=27% Similarity=0.434 Sum_probs=209.0
Q ss_pred CcccceEEeceecccCceEEEEEEEcCCCCEEEEEEeecc-------cchHHHHHHHHHHcCCCCcccccceeeecCCCC
Q 012233 134 KQTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD-------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKD 206 (468)
Q Consensus 134 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~-------~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 206 (468)
....+|.+.+.||+|+||.||+|.+..+++.||+|++.+. .....+|+.+++.++||||+++++++ .+
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~-----~~ 114 (370)
T cd05596 40 MKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAF-----QD 114 (370)
T ss_pred CCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEE-----ec
Confidence 3445799999999999999999999999999999998542 12345799999999999999999888 45
Q ss_pred ceEEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecC
Q 012233 207 ELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGS 286 (468)
Q Consensus 207 ~~~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~ 286 (468)
..++|+||||++++.+..+.. ...+++..+..++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||+
T Consensus 115 ~~~~~lv~Ey~~gg~L~~~l~----~~~l~~~~~~~~~~qi~~aL~~LH~-~~ivHrDLkp~NILl~~~~-~~kL~DfG~ 188 (370)
T cd05596 115 DKYLYMVMEYMPGGDLVNLMS----NYDIPEKWARFYTAEVVLALDAIHS-MGFIHRDVKPDNMLLDKSG-HLKLADFGT 188 (370)
T ss_pred CCEEEEEEcCCCCCcHHHHHH----hcCCCHHHHHHHHHHHHHHHHHHHH-CCeeccCCCHHHEEEcCCC-CEEEEeccc
Confidence 557999999998765543322 2357888899999999999999998 8999999999999999888 799999999
Q ss_pred ccccCCCC--CCccccccCCccccccccCCC---CCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCH
Q 012233 287 AKMLVPGE--PNISYICSRYYRAPELIFGAT---EYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTR 361 (468)
Q Consensus 287 a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~---~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~ 361 (468)
+....... .....+||+.|+|||++.+.. .++.++|||||||++|||++|..||.+.+....+.++....
T Consensus 189 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~----- 263 (370)
T cd05596 189 CMKMDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHK----- 263 (370)
T ss_pred eeeccCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCC-----
Confidence 97654322 223567999999999986532 37889999999999999999999999887766666554311
Q ss_pred HHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCC--CCCHHHHhCCCCCCCC
Q 012233 362 EEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSL--RCTALEACAHPFFDDL 426 (468)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~--R~s~~ell~hp~f~~~ 426 (468)
....+|. ...++.++++||++||+.+|.+ |++++++++||||+..
T Consensus 264 ----------~~~~~~~----------~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~~~~~ 310 (370)
T cd05596 264 ----------NSLTFPD----------DIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPFFKND 310 (370)
T ss_pred ----------CcCCCCC----------cCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCcccCCC
Confidence 0111111 1247899999999999999988 9999999999999874
No 65
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=4.6e-45 Score=360.25 Aligned_cols=245 Identities=28% Similarity=0.450 Sum_probs=201.3
Q ss_pred ceecccCceEEEEEEEcCCCCEEEEEEeeccc-------chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEEEee
Q 012233 143 RVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVLE 215 (468)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv~e 215 (468)
+.||+|+||.||++.+..+|..||+|++.... ....+|+.+++.++||||++++++| ....++|||||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~-----~~~~~~~lv~E 75 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAF-----QTHDRLCFVME 75 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEE-----ecCCEEEEEEe
Confidence 46999999999999999999999999986432 1234689999999999999999988 44456899999
Q ss_pred cccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCC-CC
Q 012233 216 YISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP-GE 294 (468)
Q Consensus 216 ~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~-~~ 294 (468)
|+.++.+.... .....+++..++.++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||++..... ..
T Consensus 76 ~~~~~~L~~~l---~~~~~~~~~~~~~~~~qi~~aL~~LH~-~~ivH~Dlkp~NIll~~~~-~~kL~Dfg~~~~~~~~~~ 150 (323)
T cd05595 76 YANGGELFFHL---SRERVFTEERARFYGAEIVSALEYLHS-RDVVYRDIKLENLMLDKDG-HIKITDFGLCKEGISDGA 150 (323)
T ss_pred CCCCCcHHHHH---HHcCCCCHHHHHHHHHHHHHHHHHHHH-CCeEecCCCHHHEEEcCCC-CEEecccHHhccccCCCC
Confidence 99977554222 224568999999999999999999998 8999999999999999888 799999999875422 22
Q ss_pred CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCCccC
Q 012233 295 PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEF 374 (468)
Q Consensus 295 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 374 (468)
......||+.|+|||++.+. .++.++|||||||++|||++|+.||...+.......+.. ...
T Consensus 151 ~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~-----------------~~~ 212 (323)
T cd05595 151 TMKTFCGTPEYLAPEVLEDN-DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM-----------------EEI 212 (323)
T ss_pred ccccccCCcCcCCcccccCC-CCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhc-----------------CCC
Confidence 23356789999999999655 489999999999999999999999987766555444432 111
Q ss_pred CCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCC-----CHHHHhCCCCCCCCC
Q 012233 375 KFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRC-----TALEACAHPFFDDLR 427 (468)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~-----s~~ell~hp~f~~~~ 427 (468)
. ++..+++++.+||.+||+.||.+|+ ++.++++||||..+.
T Consensus 213 ~------------~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~~~ 258 (323)
T cd05595 213 R------------FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSIN 258 (323)
T ss_pred C------------CCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcCCCC
Confidence 1 2345789999999999999999998 899999999999854
No 66
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=7.1e-45 Score=358.43 Aligned_cols=245 Identities=29% Similarity=0.502 Sum_probs=199.9
Q ss_pred ceecccCceEEEEEEEcCCCCEEEEEEeeccc-------chHHHHHHHHHHc-CCCCcccccceeeecCCCCceEEEEEe
Q 012233 143 RVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLL-NHPNVVSLKHCFFSTTEKDELYLNLVL 214 (468)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-------~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~~~~~~lv~ 214 (468)
+.||+|+||.||+|+++.+++.||||++.+.. .....|..++..+ +||||+++++++ .+...+|+||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~-----~~~~~~~iv~ 75 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCF-----QTPDRLFFVM 75 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEE-----EcCCEEEEEE
Confidence 46999999999999999999999999986432 2233577777766 699999999988 4445689999
Q ss_pred ecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccC-CC
Q 012233 215 EYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV-PG 293 (468)
Q Consensus 215 e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~-~~ 293 (468)
||+.++.+.... .....+++..++.++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||+++... ..
T Consensus 76 Ey~~~g~L~~~i---~~~~~l~~~~~~~~~~ql~~~L~~lH~-~~ivH~dlkp~NIli~~~~-~~kL~DfG~~~~~~~~~ 150 (320)
T cd05590 76 EFVNGGDLMFHI---QKSRRFDEARARFYAAEITSALMFLHD-KGIIYRDLKLDNVLLDHEG-HCKLADFGMCKEGIFNG 150 (320)
T ss_pred cCCCCchHHHHH---HHcCCCCHHHHHHHHHHHHHHHHHHHH-CCeEeCCCCHHHeEECCCC-cEEEeeCCCCeecCcCC
Confidence 999976554222 224568999999999999999999998 8999999999999999888 79999999987542 22
Q ss_pred CCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCCcc
Q 012233 294 EPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTE 373 (468)
Q Consensus 294 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 373 (468)
.......||+.|+|||++.+. .++.++|||||||++|+|++|+.||.+.+..+.+..+... .
T Consensus 151 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~-----------------~ 212 (320)
T cd05590 151 KTTSTFCGTPDYIAPEILQEM-LYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILND-----------------E 212 (320)
T ss_pred CcccccccCccccCHHHHcCC-CCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcC-----------------C
Confidence 233456789999999999654 4899999999999999999999999987766655554331 1
Q ss_pred CCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCH------HHHhCCCCCCCCC
Q 012233 374 FKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTA------LEACAHPFFDDLR 427 (468)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~------~ell~hp~f~~~~ 427 (468)
.. ++..++.++.+||.+||+.||.+|+++ ++++.||||+.+.
T Consensus 213 ~~------------~~~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~~~ 260 (320)
T cd05590 213 VV------------YPTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKELD 260 (320)
T ss_pred CC------------CCCCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCCCC
Confidence 11 223478999999999999999999998 8999999999864
No 67
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=4.3e-45 Score=361.21 Aligned_cols=244 Identities=27% Similarity=0.435 Sum_probs=199.9
Q ss_pred ceecccCceEEEEEEEcCCCCEEEEEEeeccc-------chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEEEee
Q 012233 143 RVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVLE 215 (468)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv~e 215 (468)
+.||+|+||.||++.+..+|+.||+|++.+.. ....+|+.+++.++||||+++++++ .+...+|+|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~~~~~lv~E 75 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSF-----QTKDRLCFVME 75 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEE-----EcCCEEEEEEe
Confidence 36999999999999999999999999986432 2334689999999999999999888 44456899999
Q ss_pred cccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCCC-C
Q 012233 216 YISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPG-E 294 (468)
Q Consensus 216 ~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~~-~ 294 (468)
|++++.+.... .....+++..++.++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||+++..... .
T Consensus 76 y~~~g~L~~~l---~~~~~l~~~~~~~~~~qi~~aL~~LH~-~~ivHrDikp~NIll~~~~-~~kL~DfG~~~~~~~~~~ 150 (328)
T cd05593 76 YVNGGELFFHL---SRERVFSEDRTRFYGAEIVSALDYLHS-GKIVYRDLKLENLMLDKDG-HIKITDFGLCKEGITDAA 150 (328)
T ss_pred CCCCCCHHHHH---HhcCCCCHHHHHHHHHHHHHHHHHHHh-CCeEecccCHHHeEECCCC-cEEEecCcCCccCCCccc
Confidence 99876553222 224568999999999999999999998 8999999999999999888 7999999998754222 2
Q ss_pred CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCCccC
Q 012233 295 PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEF 374 (468)
Q Consensus 295 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 374 (468)
.....+||+.|+|||++.+. .++.++|||||||++|+|++|+.||.+.+..+....+.. ...
T Consensus 151 ~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~-----------------~~~ 212 (328)
T cd05593 151 TMKTFCGTPEYLAPEVLEDN-DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM-----------------EDI 212 (328)
T ss_pred ccccccCCcCccChhhhcCC-CCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhcc-----------------CCc
Confidence 23346799999999999655 489999999999999999999999987765544433321 111
Q ss_pred CCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCC-----CHHHHhCCCCCCCC
Q 012233 375 KFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRC-----TALEACAHPFFDDL 426 (468)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~-----s~~ell~hp~f~~~ 426 (468)
. ++..+++++.+||.+||+.||.+|+ ++.++++||||..+
T Consensus 213 ~------------~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~ 257 (328)
T cd05593 213 K------------FPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTGV 257 (328)
T ss_pred c------------CCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence 1 3345889999999999999999997 89999999999875
No 68
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=4.5e-45 Score=358.56 Aligned_cols=243 Identities=31% Similarity=0.513 Sum_probs=199.2
Q ss_pred ecccCceEEEEEEEcCCCCEEEEEEeeccc-------chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEEEeecc
Q 012233 145 VGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVLEYI 217 (468)
Q Consensus 145 lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv~e~~ 217 (468)
||+|+||.||+|.+..+++.||+|++.... ....+|+.+++.++||||++++++| .+...+|+||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~~lv~e~~ 75 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSF-----QSPEKLYLVLAFI 75 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEE-----ecCCeEEEEEcCC
Confidence 799999999999999999999999986431 2234699999999999999999888 4445689999999
Q ss_pred cchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCCC-CCC
Q 012233 218 SETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPG-EPN 296 (468)
Q Consensus 218 ~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~~-~~~ 296 (468)
.++.+.... .....+++..+..++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||+++..... ...
T Consensus 76 ~~g~L~~~l---~~~~~~~~~~~~~~~~qi~~~l~~lH~-~~i~HrDlkp~Nili~~~~-~~kl~Dfg~~~~~~~~~~~~ 150 (312)
T cd05585 76 NGGELFHHL---QREGRFDLSRARFYTAELLCALENLHK-FNVIYRDLKPENILLDYQG-HIALCDFGLCKLNMKDDDKT 150 (312)
T ss_pred CCCcHHHHH---HhcCCCCHHHHHHHHHHHHHHHHHHHh-CCeEeCCCCHHHeEECCCC-cEEEEECcccccCccCCCcc
Confidence 976543222 224568999999999999999999998 8999999999999999888 7999999998754322 223
Q ss_pred ccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCCccCCC
Q 012233 297 ISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKF 376 (468)
Q Consensus 297 ~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 376 (468)
...+||+.|+|||++.+. .++.++|||||||++|+|++|+.||.+.+..+.+..+.. ....
T Consensus 151 ~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~-----------------~~~~- 211 (312)
T cd05585 151 NTFCGTPEYLAPELLLGH-GYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQ-----------------EPLR- 211 (312)
T ss_pred ccccCCcccCCHHHHcCC-CCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHc-----------------CCCC-
Confidence 356799999999999765 489999999999999999999999988766555544432 1111
Q ss_pred CcccCCCcccccccCCCHHHHHHHHHhcccCCCCCC---CHHHHhCCCCCCCCC
Q 012233 377 PQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRC---TALEACAHPFFDDLR 427 (468)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~---s~~ell~hp~f~~~~ 427 (468)
++..+++++.+||.+||+.||.+|+ ++.+++.||||.+..
T Consensus 212 -----------~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~hp~~~~~~ 254 (312)
T cd05585 212 -----------FPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFSQLS 254 (312)
T ss_pred -----------CCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcCCCcCCCC
Confidence 3345789999999999999999997 589999999999863
No 69
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=2.7e-44 Score=356.77 Aligned_cols=314 Identities=35% Similarity=0.640 Sum_probs=241.4
Q ss_pred cceEEeceecccCceEEEEEEEcCCCCEEEEEEeecc-----cchHHHHHHHHHHcCCCCcccccceeeecCCCCceEEE
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD-----KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~-----~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~ 211 (468)
.+|.+.+.||+|+||.||+|.+..+|+.||||++... .....+|+.+++.++||||+++++++..........+|
T Consensus 5 ~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 84 (336)
T cd07849 5 PRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDVY 84 (336)
T ss_pred cceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceEE
Confidence 4699999999999999999999999999999988532 12234699999999999999999987554444445689
Q ss_pred EEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccC
Q 012233 212 LVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (468)
Q Consensus 212 lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~ 291 (468)
+|+||+.+.+...+. ...+++..++.++.||+.||.|||+ .||+||||||+|||++.++ .+||+|||++....
T Consensus 85 lv~e~~~~~l~~~~~-----~~~l~~~~~~~i~~ql~~aL~~LH~-~~ivH~dlkp~Nill~~~~-~~kl~dfg~~~~~~ 157 (336)
T cd07849 85 IVQELMETDLYKLIK-----TQHLSNDHIQYFLYQILRGLKYIHS-ANVLHRDLKPSNLLLNTNC-DLKICDFGLARIAD 157 (336)
T ss_pred EEehhcccCHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHh-CCeeccCCCHHHEEECCCC-CEEECcccceeecc
Confidence 999999987766443 3568999999999999999999998 8999999999999999888 79999999987653
Q ss_pred CCCC----CccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhc
Q 012233 292 PGEP----NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCM 367 (468)
Q Consensus 292 ~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 367 (468)
.... .....|++.|+|||.+.+...++.++|||||||++|+|++|+.||.+.+.......+...++.+..+.+...
T Consensus 158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (336)
T cd07849 158 PEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCI 237 (336)
T ss_pred ccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHh
Confidence 3221 123567899999998766556899999999999999999999999988877778888888887776554432
Q ss_pred CCCCccCC---CCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCCCCCCCCCCCCCCCcccc
Q 012233 368 NPNYTEFK---FPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNTCLPNGRPLPTLFN 444 (468)
Q Consensus 368 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~~~~~~~~~~~~~~~~~~ 444 (468)
........ .+.....++.. ..+.+++++.+||.+||+.||.+|||+.+++.||||+.+.++........++ -
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~~~~~~~~~~~~~----~ 312 (336)
T cd07849 238 ISLRARNYIKSLPFKPKVPWNK-LFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYHDPSDEPVAEEPF----P 312 (336)
T ss_pred hchhhhhHHhhcCcCCcccHHH-HhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccCCCCCcccCCCCC----C
Confidence 21110000 01111111111 2234688999999999999999999999999999999988764432222222 3
Q ss_pred cCHHHHhcCCHHHHHhcc
Q 012233 445 FTAQELAGASNELRQRLI 462 (468)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~ 462 (468)
|+-..+..++-|..+++|
T Consensus 313 ~~~~~~~~~~~~~~~~~~ 330 (336)
T cd07849 313 FDFELFDDLPKEKLKELI 330 (336)
T ss_pred hhhccccccCHHHHHHHH
Confidence 444466788888888877
No 70
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=4.4e-45 Score=368.56 Aligned_cols=255 Identities=27% Similarity=0.436 Sum_probs=201.7
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc-------chHHHHHHHHHHcCCCCcccccceeeecCCCCceEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYL 210 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~ 210 (468)
.|.+.+.||+|+||+||+|.+..+++.||||++.+.. ....+|+.+++.++||||+++++++ .+..++
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~-----~~~~~~ 76 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSF-----QDKDNL 76 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEE-----ecCCEE
Confidence 4899999999999999999999999999999986432 2345799999999999999999988 444569
Q ss_pred EEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCcccc
Q 012233 211 NLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (468)
Q Consensus 211 ~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~ 290 (468)
|+||||++++.+.... .....+++..++.++.||+.||.|||+ .||+||||||+||||+.++ .+||+|||++...
T Consensus 77 ~lv~E~~~gg~L~~~l---~~~~~~~e~~~~~~~~qi~~aL~~LH~-~givHrDlKp~Nili~~~~-~~kL~DFGl~~~~ 151 (381)
T cd05626 77 YFVMDYIPGGDMMSLL---IRMEVFPEVLARFYIAELTLAIESVHK-MGFIHRDIKPDNILIDLDG-HIKLTDFGLCTGF 151 (381)
T ss_pred EEEEecCCCCcHHHHH---HhcCCCCHHHHHHHHHHHHHHHHHHHh-CCeeecCCcHHHEEECCCC-CEEEeeCcCCccc
Confidence 9999999876443221 124568899999999999999999998 8999999999999999887 7999999997532
Q ss_pred CCCC------------------------------------------------CCccccccCCccccccccCCCCCCcchh
Q 012233 291 VPGE------------------------------------------------PNISYICSRYYRAPELIFGATEYTTAID 322 (468)
Q Consensus 291 ~~~~------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~D 322 (468)
.... .....+||+.|+|||++.+.. ++.++|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~~D 230 (381)
T cd05626 152 RWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKG-YTQLCD 230 (381)
T ss_pred ccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCC-CCCccc
Confidence 1000 012357999999999997654 899999
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHH
Q 012233 323 MWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSR 402 (468)
Q Consensus 323 vwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 402 (468)
||||||++|||++|..||...+..+....++.... ...++. ...+++++++||.+
T Consensus 231 iwSlG~il~elltG~~Pf~~~~~~~~~~~i~~~~~---------------~~~~~~----------~~~~s~~~~dli~~ 285 (381)
T cd05626 231 WWSVGVILFEMLVGQPPFLAPTPTETQLKVINWEN---------------TLHIPP----------QVKLSPEAVDLITK 285 (381)
T ss_pred eeehhhHHHHHHhCCCCCcCCCHHHHHHHHHcccc---------------ccCCCC----------CCCCCHHHHHHHHH
Confidence 99999999999999999988776655555443100 111111 12478999999999
Q ss_pred hcc--cCCCCCCCHHHHhCCCCCCCCCC
Q 012233 403 LLQ--YSPSLRCTALEACAHPFFDDLRD 428 (468)
Q Consensus 403 ~L~--~dP~~R~s~~ell~hp~f~~~~~ 428 (468)
||. .+|..|+++.+++.||||+++..
T Consensus 286 ll~~~~~~~~R~~~~~~l~hp~f~~~~~ 313 (381)
T cd05626 286 LCCSAEERLGRNGADDIKAHPFFSEVDF 313 (381)
T ss_pred HccCcccccCCCCHHHHhcCcccCCCCh
Confidence 654 45556999999999999998643
No 71
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5e-46 Score=342.10 Aligned_cols=254 Identities=30% Similarity=0.456 Sum_probs=217.0
Q ss_pred cccceEEeceecccCceEEEEEEEcCCCCEEEEEEeecccchHH-------HHHHHHHHcCCCCcccccceeeecCCCCc
Q 012233 135 QTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRYKN-------RELQIMRLLNHPNVVSLKHCFFSTTEKDE 207 (468)
Q Consensus 135 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~~~~~-------~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 207 (468)
..++|...++||+|.||+|.+|+.+.+|+.||||+++++....+ .|-.+|+..+||.+..|.-.| +..
T Consensus 166 Tm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsF-----Qt~ 240 (516)
T KOG0690|consen 166 TMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSF-----QTQ 240 (516)
T ss_pred ccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhh-----ccC
Confidence 45689999999999999999999999999999998876543332 477899999999999887777 444
Q ss_pred eEEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCc
Q 012233 208 LYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSA 287 (468)
Q Consensus 208 ~~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a 287 (468)
..+|+||||..||-+-. +..+ .+.|++..++.|...|+.||.|||+ ++||+||||.+|+|+|.+|| +||+|||++
T Consensus 241 drlCFVMeyanGGeLf~--HLsr-er~FsE~RtRFYGaEIvsAL~YLHs-~~ivYRDlKLENLlLDkDGH-IKitDFGLC 315 (516)
T KOG0690|consen 241 DRLCFVMEYANGGELFF--HLSR-ERVFSEDRTRFYGAEIVSALGYLHS-RNIVYRDLKLENLLLDKDGH-IKITDFGLC 315 (516)
T ss_pred ceEEEEEEEccCceEee--ehhh-hhcccchhhhhhhHHHHHHhhhhhh-CCeeeeechhhhheeccCCc-eEeeecccc
Confidence 56999999999874432 2222 5679999999999999999999998 99999999999999999995 999999999
Q ss_pred ccc-CCCCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhh
Q 012233 288 KML-VPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKC 366 (468)
Q Consensus 288 ~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 366 (468)
+.- ..+....++||||.|+|||++... .|+.++|+|.+||++|||++|+.||.+.+....+..|..
T Consensus 316 KE~I~~g~t~kTFCGTPEYLAPEVleDn-DYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~------------ 382 (516)
T KOG0690|consen 316 KEEIKYGDTTKTFCGTPEYLAPEVLEDN-DYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILM------------ 382 (516)
T ss_pred hhcccccceeccccCChhhcCchhhccc-cccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHh------------
Confidence 764 334566789999999999999655 499999999999999999999999999888777776655
Q ss_pred cCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCC-----CHHHHhCCCCCCCCCC
Q 012233 367 MNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRC-----TALEACAHPFFDDLRD 428 (468)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~-----s~~ell~hp~f~~~~~ 428 (468)
.+++| +..++++++.|+..+|.+||.+|. .+.|+.+|+||..+.=
T Consensus 383 -----ed~kF------------Pr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v~W 432 (516)
T KOG0690|consen 383 -----EDLKF------------PRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASVDW 432 (516)
T ss_pred -----hhccC------------CccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccCCH
Confidence 34444 457999999999999999999998 5889999999998754
No 72
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=2.1e-44 Score=348.61 Aligned_cols=276 Identities=34% Similarity=0.633 Sum_probs=217.8
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeecc------cchHHHHHHHHHHcCCCCcccccceeeecCCCCceEEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~------~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~ 211 (468)
+|.+.+.||+|+||.||+|.+..++..||||.+... .....+|+.+++.++||||+++++++. +..++|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 75 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLM-----QESRLY 75 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEe-----eCCeEE
Confidence 488999999999999999999999999999987532 123567999999999999999999983 445689
Q ss_pred EEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccC
Q 012233 212 LVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (468)
Q Consensus 212 lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~ 291 (468)
+||||+.+++...+.... ....+++..++.++.||+.||.|||+ +||+|+||||+|||++.++ .++|+|||++....
T Consensus 76 ~v~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~lH~-~~i~H~dl~p~nil~~~~~-~~~l~dfg~~~~~~ 152 (285)
T cd07861 76 LIFEFLSMDLKKYLDSLP-KGQYMDAELVKSYLYQILQGILFCHS-RRVLHRDLKPQNLLIDNKG-VIKLADFGLARAFG 152 (285)
T ss_pred EEEecCCCCHHHHHhcCC-CCCcCCHHHHHHHHHHHHHHHHHHHh-CCeeecCCCHHHEEEcCCC-cEEECcccceeecC
Confidence 999999987766554322 24568999999999999999999998 8999999999999999888 79999999987553
Q ss_pred CCC-CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcC--
Q 012233 292 PGE-PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMN-- 368 (468)
Q Consensus 292 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~-- 368 (468)
... ......+++.|+|||++.+...++.++|||||||++|+|++|++||.+....+....+....+.+....+....
T Consensus 153 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (285)
T cd07861 153 IPVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSL 232 (285)
T ss_pred CCcccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhh
Confidence 221 22334678899999998766667899999999999999999999999988888888877777766554432211
Q ss_pred CCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCC
Q 012233 369 PNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (468)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f 423 (468)
+.+. ..++...... .......+++++++||.+||+.||.+|||+.+++.||||
T Consensus 233 ~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~~ 285 (285)
T cd07861 233 PDYK-NTFPKWKKGS-LRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF 285 (285)
T ss_pred HHHH-hhccccCcch-hHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence 0000 0011111111 111234589999999999999999999999999999998
No 73
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=3.4e-45 Score=369.53 Aligned_cols=253 Identities=28% Similarity=0.453 Sum_probs=203.4
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc-------chHHHHHHHHHHcCCCCcccccceeeecCCCCceEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYL 210 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~ 210 (468)
.|.+.+.||+|+||.||+|++..+++.||+|++.+.. ....+|+.+++.++||||++++++| .+..++
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~-----~~~~~~ 76 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSF-----QDKDNL 76 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEE-----EeCCEE
Confidence 4899999999999999999999999999999986532 2345799999999999999999998 444569
Q ss_pred EEEeecccchHH-HHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccc
Q 012233 211 NLVLEYISETVY-RVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (468)
Q Consensus 211 ~lv~e~~~~~ll-~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~ 289 (468)
|+|||||+++.+ ..+. ....+++..++.++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||++..
T Consensus 77 ~lv~E~~~gg~L~~~l~----~~~~~~e~~~~~~~~qi~~al~~lH~-~~ivHrDlKp~NILl~~~g-~~kL~DFGla~~ 150 (382)
T cd05625 77 YFVMDYIPGGDMMSLLI----RMGIFPEDLARFYIAELTCAVESVHK-MGFIHRDIKPDNILIDRDG-HIKLTDFGLCTG 150 (382)
T ss_pred EEEEeCCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEECCCC-CEEEeECCCCcc
Confidence 999999987644 3332 23568899999999999999999998 8999999999999999888 799999999753
Q ss_pred cCCC------------------------------------------------CCCccccccCCccccccccCCCCCCcch
Q 012233 290 LVPG------------------------------------------------EPNISYICSRYYRAPELIFGATEYTTAI 321 (468)
Q Consensus 290 ~~~~------------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~ 321 (468)
.... ......+||+.|+|||++.+. .++.++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~~ 229 (382)
T cd05625 151 FRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRT-GYTQLC 229 (382)
T ss_pred ccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCC-CCCCee
Confidence 2100 001235789999999999765 489999
Q ss_pred hHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHH
Q 012233 322 DMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVS 401 (468)
Q Consensus 322 DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 401 (468)
|||||||++|||++|++||.+.+..+...++..... ...+| ....+++++.+||.
T Consensus 230 DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~---------------~~~~p----------~~~~~s~~~~~li~ 284 (382)
T cd05625 230 DWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQT---------------SLHIP----------PQAKLSPEASDLII 284 (382)
T ss_pred eEEechHHHHHHHhCCCCCCCCCHHHHHHHHHccCC---------------CcCCC----------CcccCCHHHHHHHH
Confidence 999999999999999999998877666555543110 01111 11347899999999
Q ss_pred HhcccCCCCCCC---HHHHhCCCCCCCCCC
Q 012233 402 RLLQYSPSLRCT---ALEACAHPFFDDLRD 428 (468)
Q Consensus 402 ~~L~~dP~~R~s---~~ell~hp~f~~~~~ 428 (468)
+|+ .||.+|++ +.++++||||+.+..
T Consensus 285 ~l~-~~p~~R~~~~~~~ei~~hp~f~~~~~ 313 (382)
T cd05625 285 KLC-RGPEDRLGKNGADEIKAHPFFKTIDF 313 (382)
T ss_pred HHc-cCHhHcCCCCCHHHHhcCCCcCCcCh
Confidence 987 59999997 999999999998643
No 74
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=1.1e-44 Score=357.83 Aligned_cols=248 Identities=29% Similarity=0.497 Sum_probs=202.8
Q ss_pred eEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc-------chHHHHHHHH---HHcCCCCcccccceeeecCCCCce
Q 012233 139 YMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIM---RLLNHPNVVSLKHCFFSTTEKDEL 208 (468)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-------~~~~~E~~il---~~l~hpnIv~l~~~~~~~~~~~~~ 208 (468)
|.+.+.||+|+||.||+|.+..+|+.||||++.+.. ....+|+.++ +.++||||+++++++ ....
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~-----~~~~ 75 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACF-----QTED 75 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEE-----EcCC
Confidence 678899999999999999999999999999986432 1233455554 466799999999988 4445
Q ss_pred EEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCcc
Q 012233 209 YLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAK 288 (468)
Q Consensus 209 ~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~ 288 (468)
.+|+||||+.++.+..... ...+++..++.++.||+.||.|||+ .||+||||||+|||++.++ .+||+|||+++
T Consensus 76 ~~~lv~E~~~~~~L~~~~~----~~~l~~~~~~~~~~qi~~al~~lH~-~~ivHrdlkp~Nill~~~~-~~kL~Dfg~~~ 149 (324)
T cd05589 76 HVCFVMEYAAGGDLMMHIH----TDVFSEPRAVFYAACVVLGLQYLHE-NKIVYRDLKLDNLLLDTEG-FVKIADFGLCK 149 (324)
T ss_pred EEEEEEcCCCCCcHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHh-CCeEecCCCHHHeEECCCC-cEEeCcccCCc
Confidence 6899999999875543322 3568999999999999999999998 8999999999999999888 79999999987
Q ss_pred ccCC-CCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhc
Q 012233 289 MLVP-GEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCM 367 (468)
Q Consensus 289 ~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 367 (468)
.... .......+|++.|+|||++.+. .++.++|||||||++|+|++|+.||.+.+..+.+..+...
T Consensus 150 ~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~------------ 216 (324)
T cd05589 150 EGMGFGDRTSTFCGTPEFLAPEVLTET-SYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVND------------ 216 (324)
T ss_pred cCCCCCCcccccccCccccCHhHhcCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC------------
Confidence 5432 2233456799999999999765 4899999999999999999999999987766655554431
Q ss_pred CCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCC-----CHHHHhCCCCCCCCC
Q 012233 368 NPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRC-----TALEACAHPFFDDLR 427 (468)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~-----s~~ell~hp~f~~~~ 427 (468)
... ++..+++++.+||.+||+.||.+|| ++.+++.||||+++.
T Consensus 217 -----~~~------------~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~~~ 264 (324)
T cd05589 217 -----EVR------------YPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRDIN 264 (324)
T ss_pred -----CCC------------CCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCCCC
Confidence 111 2345789999999999999999999 799999999999864
No 75
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=4.8e-44 Score=357.36 Aligned_cols=254 Identities=28% Similarity=0.375 Sum_probs=200.0
Q ss_pred CcccceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc-----chHHHHHHHHHHcCCCCcccccceeeecCCCCce
Q 012233 134 KQTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDEL 208 (468)
Q Consensus 134 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 208 (468)
....+|...+.||+|+||.||+|.+..+|+.||||++.... ..+.+|+++++.++|+||+++++++ ....
T Consensus 71 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~ 145 (353)
T PLN00034 71 KSLSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMF-----DHNG 145 (353)
T ss_pred CCHHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEe-----ccCC
Confidence 33456899999999999999999999999999999985432 2345799999999999999999988 4455
Q ss_pred EEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCcc
Q 012233 209 YLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAK 288 (468)
Q Consensus 209 ~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~ 288 (468)
.+++||||+.++.+.. .....+..+..++.||+.||.|||+ +||+||||||+||||+.++ .+||+|||+++
T Consensus 146 ~~~lv~e~~~~~~L~~-------~~~~~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~NIll~~~~-~~kL~DfG~~~ 216 (353)
T PLN00034 146 EIQVLLEFMDGGSLEG-------THIADEQFLADVARQILSGIAYLHR-RHIVHRDIKPSNLLINSAK-NVKIADFGVSR 216 (353)
T ss_pred eEEEEEecCCCCcccc-------cccCCHHHHHHHHHHHHHHHHHHHH-CCEeecCCCHHHEEEcCCC-CEEEcccccce
Confidence 6899999999875531 2234567788899999999999998 8999999999999999887 79999999997
Q ss_pred ccCCCC-CCccccccCCccccccccCC----CCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHH
Q 012233 289 MLVPGE-PNISYICSRYYRAPELIFGA----TEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREE 363 (468)
Q Consensus 289 ~~~~~~-~~~~~~gt~~y~aPE~~~~~----~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~ 363 (468)
.+.... ......||..|+|||++... ...+.++|||||||++|||++|+.||......+....+.......
T Consensus 217 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~---- 292 (353)
T PLN00034 217 ILAQTMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQ---- 292 (353)
T ss_pred ecccccccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccC----
Confidence 654322 23456789999999987432 224568999999999999999999997443222211111110000
Q ss_pred HhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCC
Q 012233 364 IKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDL 426 (468)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~ 426 (468)
....+..++.++++||.+||+.||.+|||+.|+++||||..-
T Consensus 293 ---------------------~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~~ 334 (353)
T PLN00034 293 ---------------------PPEAPATASREFRHFISCCLQREPAKRWSAMQLLQHPFILRA 334 (353)
T ss_pred ---------------------CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCcccccC
Confidence 001224578899999999999999999999999999999984
No 76
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=5.1e-45 Score=360.96 Aligned_cols=258 Identities=28% Similarity=0.460 Sum_probs=208.7
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc-------chHHHHHHHHHHcCCCCcccccceeeecCCCCceEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYL 210 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~ 210 (468)
+|.+.+.||+|+||.||+|.+..+|+.||||++.... ....+|+.+++.++|+||+++++++ .+..++
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~-----~~~~~~ 76 (330)
T cd05601 2 DFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAF-----QDKDNL 76 (330)
T ss_pred CceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEE-----ecCCeE
Confidence 5999999999999999999999999999999986532 2345789999999999999999888 444568
Q ss_pred EEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCcccc
Q 012233 211 NLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (468)
Q Consensus 211 ~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~ 290 (468)
|+||||++++.+.... ......+++..++.++.||+.||.|||+ .||+||||||+|||++.++ .+||+|||++...
T Consensus 77 ~lv~e~~~~~~L~~~l--~~~~~~l~~~~~~~~~~qi~~aL~~lH~-~~i~H~Dlkp~NIll~~~~-~~kL~Dfg~a~~~ 152 (330)
T cd05601 77 YLVMEYQPGGDLLSLL--NRYEDQFDEDMAQFYLAELVLAIHSVHQ-MGYVHRDIKPENVLIDRTG-HIKLADFGSAARL 152 (330)
T ss_pred EEEECCCCCCCHHHHH--HHhcCCCCHHHHHHHHHHHHHHHHHHHH-CCeEcccCchHheEECCCC-CEEeccCCCCeEC
Confidence 9999999865443222 1223568999999999999999999998 8999999999999999888 7999999999766
Q ss_pred CCCCC--CccccccCCccccccccC-----CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHH
Q 012233 291 VPGEP--NISYICSRYYRAPELIFG-----ATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREE 363 (468)
Q Consensus 291 ~~~~~--~~~~~gt~~y~aPE~~~~-----~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~ 363 (468)
..... .....||+.|+|||++.. ...++.++|||||||++|+|++|..||...+....+.++....
T Consensus 153 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~------- 225 (330)
T cd05601 153 TANKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQ------- 225 (330)
T ss_pred CCCCceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCC-------
Confidence 43332 223478999999999863 3347889999999999999999999998877766666554310
Q ss_pred HhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCCCCC
Q 012233 364 IKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPN 430 (468)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~~~~ 430 (468)
....+|. ...+++++.+||.+||. ||.+|||+.+++.||||+.+....
T Consensus 226 --------~~~~~~~----------~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~~~~~~~~~~ 273 (330)
T cd05601 226 --------RFLKFPE----------DPKVSSDFLDLIQSLLC-GQKERLGYEGLCCHPFFSKIDWNN 273 (330)
T ss_pred --------CccCCCC----------CCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCCCcCCCCHHH
Confidence 0111111 12478999999999998 999999999999999999875443
No 77
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-46 Score=338.75 Aligned_cols=260 Identities=29% Similarity=0.460 Sum_probs=209.7
Q ss_pred ccceEEe-ceecccCceEEEEEEEcCCCCEEEEEEeecccchHHHHHHHHHH-cCCCCcccccceeeecCCCCceEEEEE
Q 012233 136 TISYMAE-RVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRYKNRELQIMRL-LNHPNVVSLKHCFFSTTEKDELYLNLV 213 (468)
Q Consensus 136 ~~~y~~~-~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~~~~~~E~~il~~-l~hpnIv~l~~~~~~~~~~~~~~~~lv 213 (468)
+++|.+. ++||-|-.|+|..|..+.+|+.+|+|++....+ .++|+++--. -.|||||.++++|.... .+..++.||
T Consensus 60 tedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds~K-ARrEVeLHw~~s~h~~iV~IidVyeNs~-~~rkcLLiV 137 (400)
T KOG0604|consen 60 TEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDSPK-ARREVELHWMASGHPHIVSIIDVYENSY-QGRKCLLIV 137 (400)
T ss_pred hhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcCHH-HHhHhhhhhhhcCCCceEEeehhhhhhc-cCceeeEee
Confidence 3457665 689999999999999999999999998765444 3568877444 46999999999985544 556788899
Q ss_pred eecccchHH-HHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCC--CcEEEeeecCcccc
Q 012233 214 LEYISETVY-RVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHT--HQLKICDFGSAKML 290 (468)
Q Consensus 214 ~e~~~~~ll-~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~--~~vkL~DFG~a~~~ 290 (468)
||++.||-| ..+ ..+..+.|++.++..|+.||+.|+.|||+ .+|.||||||+|+|..... ..+||+|||+|+..
T Consensus 138 mE~meGGeLfsri--q~~g~~afTErea~eI~~qI~~Av~~lH~-~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t 214 (400)
T KOG0604|consen 138 MECMEGGELFSRI--QDRGDQAFTEREASEIMKQIGLAVRYLHS-MNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKET 214 (400)
T ss_pred eecccchHHHHHH--HHcccccchHHHHHHHHHHHHHHHHHHHh-cchhhccCChhheeeecCCCCcceEeccccccccc
Confidence 999997643 322 34456779999999999999999999998 8999999999999996443 26999999999977
Q ss_pred CCCCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHH----HHHHHHHhCCCCHHHHhh
Q 012233 291 VPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQ----LVEIIKILGTPTREEIKC 366 (468)
Q Consensus 291 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~----~~~i~~~~~~~~~~~~~~ 366 (468)
.......+.|.||+|.|||++ |...|+..+|+||+||++|-||+|.+||....+... -.+|..
T Consensus 215 ~~~~~L~TPc~TPyYvaPevl-g~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~------------ 281 (400)
T KOG0604|consen 215 QEPGDLMTPCFTPYYVAPEVL-GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRT------------ 281 (400)
T ss_pred CCCccccCCcccccccCHHHh-CchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhc------------
Confidence 655667788999999999998 566699999999999999999999999987654321 122222
Q ss_pred cCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCC
Q 012233 367 MNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDL 426 (468)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~ 426 (468)
..+.||. . -|..+|++++|+|+++|..+|.+|+|+.++++|||+..-
T Consensus 282 -----gqy~FP~---p-----EWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~ 328 (400)
T KOG0604|consen 282 -----GQYEFPE---P-----EWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQY 328 (400)
T ss_pred -----cCccCCC---h-----hHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhccc
Confidence 2333432 1 234589999999999999999999999999999999863
No 78
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=8.1e-45 Score=364.73 Aligned_cols=257 Identities=28% Similarity=0.459 Sum_probs=206.9
Q ss_pred cccceEEeceecccCceEEEEEEEcCCCCEEEEEEeecc-------cchHHHHHHHHHHcCCCCcccccceeeecCCCCc
Q 012233 135 QTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD-------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDE 207 (468)
Q Consensus 135 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~-------~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 207 (468)
...+|.+.+.||+|+||.||++.+..+++.||+|++.+. .....+|+.+++.++||||+++++++ .+.
T Consensus 41 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~-----~~~ 115 (370)
T cd05621 41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAF-----QDD 115 (370)
T ss_pred CHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEE-----EcC
Confidence 345699999999999999999999999999999998542 22345799999999999999999988 455
Q ss_pred eEEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCc
Q 012233 208 LYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSA 287 (468)
Q Consensus 208 ~~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a 287 (468)
.++|+||||++++.+..... ...+++..++.++.||+.||+|||+ +||+||||||+|||++.++ .+||+|||++
T Consensus 116 ~~~~lv~Ey~~gg~L~~~l~----~~~~~~~~~~~~~~qil~aL~~LH~-~~IvHrDLKp~NILl~~~~-~~kL~DFG~a 189 (370)
T cd05621 116 KYLYMVMEYMPGGDLVNLMS----NYDVPEKWAKFYTAEVVLALDAIHS-MGLIHRDVKPDNMLLDKHG-HLKLADFGTC 189 (370)
T ss_pred CEEEEEEcCCCCCcHHHHHH----hcCCCHHHHHHHHHHHHHHHHHHHH-CCeEecCCCHHHEEECCCC-CEEEEecccc
Confidence 57999999998764443222 2357889999999999999999998 8999999999999999888 7999999999
Q ss_pred cccCCCC--CCccccccCCccccccccCCC---CCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHH
Q 012233 288 KMLVPGE--PNISYICSRYYRAPELIFGAT---EYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTRE 362 (468)
Q Consensus 288 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~---~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~ 362 (468)
....... .....+||+.|+|||++.+.. .++.++|||||||++|+|++|+.||.+.+....+.++.....
T Consensus 190 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~----- 264 (370)
T cd05621 190 MKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKN----- 264 (370)
T ss_pred eecccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCc-----
Confidence 8654322 223567999999999986532 378899999999999999999999998877666666554211
Q ss_pred HHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCC--CCCHHHHhCCCCCCCCC
Q 012233 363 EIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSL--RCTALEACAHPFFDDLR 427 (468)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~--R~s~~ell~hp~f~~~~ 427 (468)
...+|. ...++..+++||.+||..++.+ |+++.++++||||+...
T Consensus 265 ----------~~~~p~----------~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~~~~~~ 311 (370)
T cd05621 265 ----------SLNFPE----------DVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKNDQ 311 (370)
T ss_pred ----------ccCCCC----------cccCCHHHHHHHHHHccCchhccCCCCHHHHhcCcccCCCC
Confidence 111111 1246899999999999866544 89999999999998743
No 79
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=1e-45 Score=338.40 Aligned_cols=298 Identities=37% Similarity=0.612 Sum_probs=233.5
Q ss_pred cceEEeceecccCceEEEEEEEcCCCC----EEEEEEeeccc------chHHHHHHHHHHcCCCCcccccceeeecCCCC
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLETGD----SVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKD 206 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~----~vaiK~~~~~~------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 206 (468)
..|++...||+|.||.||+|..+.++. .+|||++...+ ...-+|+.+++.++||||+.|..+|...
T Consensus 24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~---- 99 (438)
T KOG0666|consen 24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSH---- 99 (438)
T ss_pred HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhcc----
Confidence 469999999999999999997655443 68999886552 2234899999999999999999999653
Q ss_pred ceEEEEEeecccchHHHHHhhhhh-cCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCC----CCcEEE
Q 012233 207 ELYLNLVLEYISETVYRVSKHYTR-MNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPH----THQLKI 281 (468)
Q Consensus 207 ~~~~~lv~e~~~~~ll~~~~~~~~-~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~----~~~vkL 281 (468)
+..+++++||.+.+++.++.+... ....++...++.++.||+.|+.|||+ +=|+||||||.||||..+ | .|||
T Consensus 100 d~~v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~-NWvlHRDLKPaNIlvmgdgperG-~VKI 177 (438)
T KOG0666|consen 100 DKKVWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHS-NWVLHRDLKPANILVMGDGPERG-RVKI 177 (438)
T ss_pred CceEEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhh-hheeeccCCcceEEEeccCCccC-eeEe
Confidence 346999999999999998875433 33568889999999999999999997 789999999999999776 5 7999
Q ss_pred eeecCccccCCCC----CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCC---------cHHH
Q 012233 282 CDFGSAKMLVPGE----PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGES---------GVDQ 348 (468)
Q Consensus 282 ~DFG~a~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~---------~~~~ 348 (468)
+|||+++.+...- .....+.|.+|+|||++.|...|+++.|||++|||+.||++-.+.|.+.. ..++
T Consensus 178 aDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQ 257 (438)
T KOG0666|consen 178 ADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQ 257 (438)
T ss_pred ecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHH
Confidence 9999998874332 22345679999999999999999999999999999999999999997632 3478
Q ss_pred HHHHHHHhCCCCHHHHhhcC--CCCcc--CCCC--cccCCCccccc--ccCCCHHHHHHHHHhcccCCCCCCCHHHHhCC
Q 012233 349 LVEIIKILGTPTREEIKCMN--PNYTE--FKFP--QIKAHPWHKIF--HKRMPPEALDLVSRLLQYSPSLRCTALEACAH 420 (468)
Q Consensus 349 ~~~i~~~~~~~~~~~~~~~~--~~~~~--~~~~--~~~~~~~~~~~--~~~~~~~l~~li~~~L~~dP~~R~s~~ell~h 420 (468)
+..|++.+|.|+...|..+. |.+.. -.|+ ......+...+ ++.-++.+.+|+.+||.+||-+|+|++++|+|
T Consensus 258 l~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh 337 (438)
T KOG0666|consen 258 LDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEH 337 (438)
T ss_pred HHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcc
Confidence 99999999999988776533 22210 0111 11111112222 23345569999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCcccccC
Q 012233 421 PFFDDLRDPNTCLPNGRPLPTLFNFT 446 (468)
Q Consensus 421 p~f~~~~~~~~~~~~~~~~~~~~~~~ 446 (468)
+||..-..+ .+|+...+||+
T Consensus 338 ~yF~~d~lp------p~pt~~~vnf~ 357 (438)
T KOG0666|consen 338 PYFTEDPLP------PLPTSDNVNFE 357 (438)
T ss_pred cccccCCCC------CCcccceeecc
Confidence 999875444 34555666666
No 80
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=3.1e-44 Score=356.45 Aligned_cols=313 Identities=35% Similarity=0.631 Sum_probs=241.2
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeecc------cchHHHHHHHHHHcCCCCcccccceeeecCCCCceEEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~------~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~ 211 (468)
+|.+.+.||.|+||.||+|.+..++..||||.+... .....+|+.+++.++|+||+++++++..........+|
T Consensus 6 ~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~ 85 (337)
T cd07858 6 KYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDVY 85 (337)
T ss_pred ceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcEE
Confidence 599999999999999999999999999999987542 12344699999999999999999987544333334589
Q ss_pred EEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccC
Q 012233 212 LVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (468)
Q Consensus 212 lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~ 291 (468)
+||||+.++++..+.. ...+++..+..++.||+.||.|||+ +|++|+||||+|||++.++ .+||+|||++....
T Consensus 86 lv~e~~~~~L~~~~~~----~~~l~~~~~~~i~~qi~~aL~~LH~-~~i~H~dlkp~Nil~~~~~-~~kL~Dfg~~~~~~ 159 (337)
T cd07858 86 IVYELMDTDLHQIIRS----SQTLSDDHCQYFLYQLLRGLKYIHS-ANVLHRDLKPSNLLLNANC-DLKICDFGLARTTS 159 (337)
T ss_pred EEEeCCCCCHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHh-CCEecCCCCHHHEEEcCCC-CEEECcCccccccC
Confidence 9999999877665432 4568999999999999999999998 8999999999999999887 79999999997654
Q ss_pred CC-CCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCC
Q 012233 292 PG-EPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPN 370 (468)
Q Consensus 292 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 370 (468)
.. .......++..|+|||.+.+...++.++|+|||||++|+|++|++||.+.+....+..+....+.+..+.+......
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (337)
T cd07858 160 EKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNE 239 (337)
T ss_pred CCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCch
Confidence 33 22334567899999999865445899999999999999999999999998888888888888777766554321110
Q ss_pred CccC---CCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCCCCCCCCCCCCCCCcccccCH
Q 012233 371 YTEF---KFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNTCLPNGRPLPTLFNFTA 447 (468)
Q Consensus 371 ~~~~---~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~~~~~~~~~~~~~~~~~~~~~ 447 (468)
.... ..+......+ ....+.+++++.+||++||+.||.+|||+.+++.||||+.+.+++.- +. .+.|-.++|++
T Consensus 240 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~~~~~~-~~-~~~~~~~~~~~ 316 (337)
T cd07858 240 KARRYIRSLPYTPRQSF-ARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLHDPSDE-PV-CQTPFSFDFEE 316 (337)
T ss_pred hhhHHHHhcCcccccCH-HHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhcCcccC-cc-CCCccchhhhh
Confidence 0000 0000000011 11235689999999999999999999999999999999999887753 33 34566677774
Q ss_pred HHHhcCCHHHHHhcc
Q 012233 448 QELAGASNELRQRLI 462 (468)
Q Consensus 448 ~~~~~~~~~~~~~~~ 462 (468)
.+ .+.+..+++|
T Consensus 317 ~~---~~~~~~~~~~ 328 (337)
T cd07858 317 DA---LTEEDIKELI 328 (337)
T ss_pred hh---cCHHHHHHHH
Confidence 44 5555666555
No 81
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=1.1e-43 Score=348.20 Aligned_cols=285 Identities=35% Similarity=0.562 Sum_probs=225.1
Q ss_pred ccceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc------chHHHHHHHHHHcCCCCcccccceeeecCCCCceE
Q 012233 136 TISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELY 209 (468)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~ 209 (468)
..+|.+.+.||.|+||.||+|.+..+|+.||+|.+.... ....+|+.+++.++|+||+++++++... ....
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~~~~ 82 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGK---HLDS 82 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecC---CCCe
Confidence 346999999999999999999999999999999885322 1234799999999999999999987432 2235
Q ss_pred EEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccc
Q 012233 210 LNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (468)
Q Consensus 210 ~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~ 289 (468)
+++||||+.+++..++... ...+++..++.++.||+.||.|||+ .|++||||||+|||++.++ .+||+|||++..
T Consensus 83 ~~lv~e~~~~~l~~~l~~~---~~~l~~~~~~~~~~qi~~~l~~lH~-~~i~H~dl~p~nil~~~~~-~~kL~dfg~~~~ 157 (309)
T cd07845 83 IFLVMEYCEQDLASLLDNM---PTPFSESQVKCLMLQLLRGLQYLHE-NFIIHRDLKVSNLLLTDKG-CLKIADFGLART 157 (309)
T ss_pred EEEEEecCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEECCCC-CEEECccceeee
Confidence 7899999998776655432 3568999999999999999999998 8999999999999999887 799999999976
Q ss_pred cCCCC-CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcC
Q 012233 290 LVPGE-PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMN 368 (468)
Q Consensus 290 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 368 (468)
..... ......+++.|+|||++.+...++.++|||||||++|+|++|++||.+.+..+.+..+...++.+....+....
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (309)
T cd07845 158 YGLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFS 237 (309)
T ss_pred cCCccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhh
Confidence 64332 22233457889999998766668999999999999999999999999999999999998888877665443221
Q ss_pred --CCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCCCC
Q 012233 369 --PNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDP 429 (468)
Q Consensus 369 --~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~~~ 429 (468)
+....+.++......+.. ....+++++.+||.+||+.||.+|||+.+++.||||++...+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~~~~~ 299 (309)
T cd07845 238 DLPLVGKFTLPKQPYNNLKH-KFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKEKPLP 299 (309)
T ss_pred cccccccccccCCCCCchHH-hccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccCCCC
Confidence 111122222111111111 113368899999999999999999999999999999875554
No 82
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=6.3e-45 Score=366.82 Aligned_cols=253 Identities=28% Similarity=0.428 Sum_probs=202.7
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeecc-------cchHHHHHHHHHHcCCCCcccccceeeecCCCCceEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD-------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYL 210 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~-------~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~ 210 (468)
+|.+.+.||+|+||.||+|++..+++.||||++.+. .....+|+.+|+.++||||+++++.| .+..++
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~-----~~~~~~ 76 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSF-----QDKDNL 76 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEE-----EcCCEE
Confidence 599999999999999999999999999999998542 22345799999999999999999988 445579
Q ss_pred EEEeecccchHH-HHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccc
Q 012233 211 NLVLEYISETVY-RVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (468)
Q Consensus 211 ~lv~e~~~~~ll-~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~ 289 (468)
|+|||||+++.+ +.+. ....+++..++.++.||+.||+|||+ +||+||||||+|||++.++ .+||+|||++..
T Consensus 77 ~lv~E~~~~g~L~~~i~----~~~~~~~~~~~~~~~qi~~al~~lH~-~~ivHrDlkp~Nill~~~~-~ikL~DFG~a~~ 150 (376)
T cd05598 77 YFVMDYIPGGDMMSLLI----RLGIFEEDLARFYIAELTCAIESVHK-MGFIHRDIKPDNILIDRDG-HIKLTDFGLCTG 150 (376)
T ss_pred EEEEeCCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHH-CCeEeCCCCHHHEEECCCC-CEEEEeCCCCcc
Confidence 999999987644 3332 24568889999999999999999998 8999999999999999888 799999999753
Q ss_pred cCCC--------------------------------------------CCCccccccCCccccccccCCCCCCcchhHHH
Q 012233 290 LVPG--------------------------------------------EPNISYICSRYYRAPELIFGATEYTTAIDMWS 325 (468)
Q Consensus 290 ~~~~--------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwS 325 (468)
+... ......+||+.|+|||++.+.. ++.++||||
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwS 229 (376)
T cd05598 151 FRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTG-YTQLCDWWS 229 (376)
T ss_pred ccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCC-CCcceeeee
Confidence 2100 0011357999999999997654 899999999
Q ss_pred HHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcc
Q 012233 326 IGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQ 405 (468)
Q Consensus 326 lG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~ 405 (468)
|||++|||++|+.||.+.+..+....+.... ....++ ....+++++.+||.+|+
T Consensus 230 lGvilyell~G~~Pf~~~~~~~~~~~i~~~~---------------~~~~~~----------~~~~~s~~~~~li~~l~- 283 (376)
T cd05598 230 VGVILYEMLVGQPPFLADTPAETQLKVINWE---------------TTLHIP----------SQAKLSREASDLILRLC- 283 (376)
T ss_pred ccceeeehhhCCCCCCCCCHHHHHHHHhccC---------------ccccCC----------CCCCCCHHHHHHHHHHh-
Confidence 9999999999999999877665554443210 001111 11347899999999987
Q ss_pred cCCCCCC---CHHHHhCCCCCCCCCC
Q 012233 406 YSPSLRC---TALEACAHPFFDDLRD 428 (468)
Q Consensus 406 ~dP~~R~---s~~ell~hp~f~~~~~ 428 (468)
.+|.+|+ ++.++++||||+.+..
T Consensus 284 ~~p~~R~~~~t~~ell~h~~~~~~~~ 309 (376)
T cd05598 284 CGAEDRLGKNGADEIKAHPFFKGIDF 309 (376)
T ss_pred cCHhhcCCCCCHHHHhCCCCcCCCCH
Confidence 5999999 9999999999998643
No 83
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=2.7e-44 Score=348.45 Aligned_cols=255 Identities=27% Similarity=0.392 Sum_probs=206.7
Q ss_pred eEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc-------chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEE
Q 012233 139 YMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (468)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~ 211 (468)
|++.+.||+|+||.||++.+..+++.||||++.... ....+|+.+++.++||||+++++++ ....++|
T Consensus 2 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~~ 76 (285)
T cd05605 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAY-----ETKDALC 76 (285)
T ss_pred ceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeee-----cCCCeEE
Confidence 889999999999999999999999999999885431 2335699999999999999999888 4445689
Q ss_pred EEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccC
Q 012233 212 LVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (468)
Q Consensus 212 lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~ 291 (468)
+||||+.++.+..... ......+++..+..++.|++.||.|||+ .||+||||||+||+++.++ .++|+|||++....
T Consensus 77 lv~e~~~~~~L~~~~~-~~~~~~~~~~~~~~~~~qi~~~l~~lH~-~~ivH~dlkp~Nil~~~~~-~~~l~Dfg~~~~~~ 153 (285)
T cd05605 77 LVLTLMNGGDLKFHIY-NMGNPGFDEERAVFYAAEITCGLEDLHR-ERIVYRDLKPENILLDDYG-HIRISDLGLAVEIP 153 (285)
T ss_pred EEEeccCCCcHHHHHH-hcCcCCCCHHHHHHHHHHHHHHHHHHHH-CCcEecCCCHHHEEECCCC-CEEEeeCCCceecC
Confidence 9999998765543222 1223568999999999999999999998 8999999999999999887 79999999998765
Q ss_pred CCCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCC
Q 012233 292 PGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNY 371 (468)
Q Consensus 292 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 371 (468)
.........|++.|+|||++.+. .++.++|||||||++|+|++|+.||.+.........+...+....
T Consensus 154 ~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~----------- 221 (285)
T cd05605 154 EGETIRGRVGTVGYMAPEVVKNE-RYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQ----------- 221 (285)
T ss_pred CCCccccccCCCCccCcHHhcCC-CCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhcc-----------
Confidence 44444456889999999999754 489999999999999999999999987665443333322111000
Q ss_pred ccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCC-----CHHHHhCCCCCCCCC
Q 012233 372 TEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRC-----TALEACAHPFFDDLR 427 (468)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~-----s~~ell~hp~f~~~~ 427 (468)
..++..+++.+.+||.+||+.||.+|| ++.+++.||||....
T Consensus 222 --------------~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~ 268 (285)
T cd05605 222 --------------EEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRTAN 268 (285)
T ss_pred --------------cccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCccCCC
Confidence 012345789999999999999999999 999999999998743
No 84
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=2.2e-44 Score=355.51 Aligned_cols=250 Identities=28% Similarity=0.448 Sum_probs=202.6
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc-------chHHHHHHHHHHcCCC-CcccccceeeecCCCCceE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHP-NVVSLKHCFFSTTEKDELY 209 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-------~~~~~E~~il~~l~hp-nIv~l~~~~~~~~~~~~~~ 209 (468)
+|.+.+.||+|+||.||+|.+..+++.||||++.+.. .....|..++..+.|+ +|++++++| .+...
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~-----~~~~~ 75 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCF-----QTMDR 75 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEE-----EcCCE
Confidence 4899999999999999999999999999999986432 2234688888888765 577888777 34446
Q ss_pred EEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccc
Q 012233 210 LNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (468)
Q Consensus 210 ~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~ 289 (468)
+|+||||+.++.+.... .....+++..++.++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||++..
T Consensus 76 ~~lv~E~~~~g~L~~~~---~~~~~~~~~~~~~~~~qi~~al~~lH~-~~ivH~dlkp~Nill~~~~-~~kL~Dfg~~~~ 150 (324)
T cd05587 76 LYFVMEYVNGGDLMYHI---QQVGKFKEPHAVFYAAEIAIGLFFLHS-KGIIYRDLKLDNVMLDAEG-HIKIADFGMCKE 150 (324)
T ss_pred EEEEEcCCCCCcHHHHH---HHcCCCCHHHHHHHHHHHHHHHHHHHH-CCeEecCCCHHHeEEcCCC-CEEEeecCccee
Confidence 89999999876543221 224568899999999999999999998 8999999999999999888 799999999864
Q ss_pred cC-CCCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcC
Q 012233 290 LV-PGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMN 368 (468)
Q Consensus 290 ~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 368 (468)
.. ........+||+.|+|||++.+.. ++.++|||||||++|+|++|+.||.+.+..+.+..+...
T Consensus 151 ~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~------------- 216 (324)
T cd05587 151 NIFGGKTTRTFCGTPDYIAPEIIAYQP-YGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEH------------- 216 (324)
T ss_pred cCCCCCceeeecCCccccChhhhcCCC-CCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcC-------------
Confidence 32 222334567999999999997654 899999999999999999999999887766655554331
Q ss_pred CCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCH-----HHHhCCCCCCCCC
Q 012233 369 PNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTA-----LEACAHPFFDDLR 427 (468)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~-----~ell~hp~f~~~~ 427 (468)
... ++..+++++.+||.+||..||.+|++. .+++.||||+.+.
T Consensus 217 ----~~~------------~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~~~ 264 (324)
T cd05587 217 ----NVS------------YPKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRRID 264 (324)
T ss_pred ----CCC------------CCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCCCC
Confidence 111 334578999999999999999999976 8999999999863
No 85
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=6.9e-45 Score=359.29 Aligned_cols=246 Identities=28% Similarity=0.444 Sum_probs=200.4
Q ss_pred ceecccCceEEEEEEEcCCCCEEEEEEeeccc-------chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEEEee
Q 012233 143 RVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVLE 215 (468)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv~e 215 (468)
+.||+|+||.||++.+..+|..||+|++.... ....+|+.+++.++||||++++++| ....++|||||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~-----~~~~~~~lv~E 75 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSF-----QTHDRLCFVME 75 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEE-----EcCCEEEEEEe
Confidence 46999999999999999999999999986432 2234688899999999999999888 44456899999
Q ss_pred cccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCC-CC
Q 012233 216 YISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP-GE 294 (468)
Q Consensus 216 ~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~-~~ 294 (468)
|+.++.+.... .....+++..++.++.||+.||.|||+..||+||||||+|||++.++ .+||+|||+++.... ..
T Consensus 76 ~~~~~~L~~~l---~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~-~~kL~Dfg~~~~~~~~~~ 151 (325)
T cd05594 76 YANGGELFFHL---SRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDG-HIKITDFGLCKEGIKDGA 151 (325)
T ss_pred CCCCCcHHHHH---HhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCC-CEEEecCCCCeecCCCCc
Confidence 99987554222 22456899999999999999999999536999999999999999888 799999999875432 22
Q ss_pred CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCCccC
Q 012233 295 PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEF 374 (468)
Q Consensus 295 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 374 (468)
......||+.|+|||++.+. .++.++|||||||++|+|++|..||.+.+.......+.. ...
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~-----------------~~~ 213 (325)
T cd05594 152 TMKTFCGTPEYLAPEVLEDN-DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM-----------------EEI 213 (325)
T ss_pred ccccccCCcccCCHHHHccC-CCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhc-----------------CCC
Confidence 33356799999999999665 489999999999999999999999987765544443322 111
Q ss_pred CCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCC-----CHHHHhCCCCCCCCC
Q 012233 375 KFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRC-----TALEACAHPFFDDLR 427 (468)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~-----s~~ell~hp~f~~~~ 427 (468)
. ++..+++++.+||.+||+.||.+|+ ++.+++.||||..+.
T Consensus 214 ~------------~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~ 259 (325)
T cd05594 214 R------------FPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAGIV 259 (325)
T ss_pred C------------CCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCCCC
Confidence 1 2345789999999999999999997 899999999999753
No 86
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.3e-44 Score=358.36 Aligned_cols=255 Identities=30% Similarity=0.470 Sum_probs=200.4
Q ss_pred ceEEeceecccCceEEEEEEEc---CCCCEEEEEEeeccc--------chHHHHHHHHHHcC-CCCcccccceeeecCCC
Q 012233 138 SYMAERVVGTGSFGVVFQAKCL---ETGDSVAIKKVLQDK--------RYKNRELQIMRLLN-HPNVVSLKHCFFSTTEK 205 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~---~~g~~vaiK~~~~~~--------~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~ 205 (468)
+|.+.+.||+|+||.||++++. .+++.||+|++.+.. ....+|+.+++.++ ||||+++++++ .
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~-----~ 75 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAF-----Q 75 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEE-----e
Confidence 4899999999999999999864 478999999985421 22346899999994 99999999887 4
Q ss_pred CceEEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeec
Q 012233 206 DELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFG 285 (468)
Q Consensus 206 ~~~~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG 285 (468)
....+++||||+.++.+.... .....+++..++.++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||
T Consensus 76 ~~~~~~lv~e~~~~g~L~~~l---~~~~~~~~~~~~~~~~qi~~~l~~lH~-~~ivHrDlkp~Nili~~~~-~~kl~DfG 150 (332)
T cd05614 76 TEAKLHLILDYVSGGEMFTHL---YQRDNFSEDEVRFYSGEIILALEHLHK-LGIVYRDIKLENILLDSEG-HVVLTDFG 150 (332)
T ss_pred cCCEEEEEEeCCCCCcHHHHH---HHcCCCCHHHHHHHHHHHHHHHHHHHH-CCcEecCCCHHHeEECCCC-CEEEeeCc
Confidence 555689999999876443221 224568999999999999999999998 8999999999999999888 79999999
Q ss_pred CccccCCCC--CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHH
Q 012233 286 SAKMLVPGE--PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREE 363 (468)
Q Consensus 286 ~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~ 363 (468)
+++...... .....+||+.|+|||++.+...++.++|||||||++|||++|..||...........+......
T Consensus 151 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~----- 225 (332)
T cd05614 151 LSKEFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILK----- 225 (332)
T ss_pred CCccccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhc-----
Confidence 997653322 2334679999999999976655889999999999999999999999754322111111111000
Q ss_pred HhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCC-----CHHHHhCCCCCCCCC
Q 012233 364 IKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRC-----TALEACAHPFFDDLR 427 (468)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~-----s~~ell~hp~f~~~~ 427 (468)
....++..+++.+.+||.+||+.||.+|+ +++++++||||+++.
T Consensus 226 --------------------~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~ 274 (332)
T cd05614 226 --------------------CDPPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKGLD 274 (332)
T ss_pred --------------------CCCCCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCCCC
Confidence 00113345789999999999999999999 888999999999864
No 87
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=1.1e-43 Score=354.65 Aligned_cols=311 Identities=31% Similarity=0.541 Sum_probs=237.3
Q ss_pred cceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc------chHHHHHHHHHHcCCCCcccccceeeecCC-CCceE
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTE-KDELY 209 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~-~~~~~ 209 (468)
.+|.+.+.||+|+||.||+|.+..+|+.||||.+.+.. ....+|+.+++.++||||++++++|..... .+..+
T Consensus 16 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 95 (353)
T cd07850 16 KRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQD 95 (353)
T ss_pred cceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccCc
Confidence 46999999999999999999999999999999885421 233469999999999999999998754322 12235
Q ss_pred EEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccc
Q 012233 210 LNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (468)
Q Consensus 210 ~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~ 289 (468)
.|+||||+.+++...+.. .++...+..++.||+.||+|||+ .||+||||||+|||++.++ .+||+|||++..
T Consensus 96 ~~lv~e~~~~~l~~~~~~------~l~~~~~~~~~~ql~~aL~~LH~-~gi~H~dlkp~Nil~~~~~-~~kL~Dfg~~~~ 167 (353)
T cd07850 96 VYLVMELMDANLCQVIQM------DLDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDC-TLKILDFGLART 167 (353)
T ss_pred EEEEEeccCCCHHHHHhh------cCCHHHHHHHHHHHHHHHHHHHh-CCeeeCCCCHHHEEECCCC-CEEEccCcccee
Confidence 789999999887765432 27888899999999999999998 8999999999999999888 799999999987
Q ss_pred cCCCCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCC
Q 012233 290 LVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP 369 (468)
Q Consensus 290 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 369 (468)
...........+++.|+|||.+.+.. ++.++|||||||++|+|++|+.||...+..+.+.++...++.|+...+.....
T Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (353)
T cd07850 168 AGTSFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQP 246 (353)
T ss_pred CCCCCCCCCCcccccccCHHHHhCCC-CCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhh
Confidence 65444444567889999999997654 89999999999999999999999999888888888888888887654443221
Q ss_pred CC----------ccCCCCcccC-CCc---ccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCCCCCCCCCC
Q 012233 370 NY----------TEFKFPQIKA-HPW---HKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNTCLPN 435 (468)
Q Consensus 370 ~~----------~~~~~~~~~~-~~~---~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~~~~~~~~~ 435 (468)
.. ....+..+.. ..+ ....+...++.+.+||.+||+.||.+|||+.|+|.||||+.+-++..+..
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~~~~~~~~~~~- 325 (353)
T cd07850 247 TVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYINVWYDPSEVEA- 325 (353)
T ss_pred hhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHhhccCCccCCC-
Confidence 11 1111111000 000 00012345678999999999999999999999999999997766555433
Q ss_pred CCCCCcccccCHHHHhcCCHHHHHh
Q 012233 436 GRPLPTLFNFTAQELAGASNELRQR 460 (468)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (468)
|.|.+++.. ++-.+..-+-|+.
T Consensus 326 --~~~~~~~~~-~~~~~~~~~~~~~ 347 (353)
T cd07850 326 --PPPAPYDHS-IDEREHTVEEWKE 347 (353)
T ss_pred --CCCCccccc-cccccccHHHHHH
Confidence 346666655 3344555555554
No 88
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=7.3e-44 Score=350.34 Aligned_cols=277 Identities=31% Similarity=0.555 Sum_probs=206.1
Q ss_pred eceecccCceEEEEEEEcC--CCCEEEEEEeeccc--chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEEEeecc
Q 012233 142 ERVVGTGSFGVVFQAKCLE--TGDSVAIKKVLQDK--RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVLEYI 217 (468)
Q Consensus 142 ~~~lG~G~fg~Vy~~~~~~--~g~~vaiK~~~~~~--~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv~e~~ 217 (468)
+..||+|+||.||+|.+.. ++..||+|.+.... ....+|+.+++.++||||+++++++... ....+++||||+
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~---~~~~~~lv~e~~ 82 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGISMSACREIALLRELKHPNVIALQKVFLSH---SDRKVWLLFDYA 82 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCCcHHHHHHHHHHHhCCCCCeeeEEEEEecc---CCCeEEEEEeee
Confidence 3579999999999999754 56889999886543 2456799999999999999999988543 234688999999
Q ss_pred cchHHHHHhhhhh-----cCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeec----CCCCcEEEeeecCcc
Q 012233 218 SETVYRVSKHYTR-----MNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVN----PHTHQLKICDFGSAK 288 (468)
Q Consensus 218 ~~~ll~~~~~~~~-----~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~----~~~~~vkL~DFG~a~ 288 (468)
+++++..+..... ....+++..++.++.||+.||.|||+ .||+||||||+|||+. .++ .+||+|||+++
T Consensus 83 ~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~-~~ivH~Dlkp~Nil~~~~~~~~~-~~kl~DfG~a~ 160 (317)
T cd07867 83 EHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHA-NWVLHRDLKPANILVMGEGPERG-RVKIADMGFAR 160 (317)
T ss_pred CCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHh-CCEEcCCCCHHHEEEccCCCCCC-cEEEeecccee
Confidence 9988776543211 12357888899999999999999998 8999999999999993 334 79999999998
Q ss_pred ccCCCC----CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCC---------cHHHHHHHHHH
Q 012233 289 MLVPGE----PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGES---------GVDQLVEIIKI 355 (468)
Q Consensus 289 ~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~---------~~~~~~~i~~~ 355 (468)
...... ......+|+.|+|||++.+...++.++|||||||++|||++|.+||.... ...++..++..
T Consensus 161 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 240 (317)
T cd07867 161 LFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSV 240 (317)
T ss_pred ccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHh
Confidence 654322 12345779999999999776668999999999999999999999997543 23456667777
Q ss_pred hCCCCHHHHhhcC--CCCccCC----CCcccCCC---cccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCC
Q 012233 356 LGTPTREEIKCMN--PNYTEFK----FPQIKAHP---WHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (468)
Q Consensus 356 ~~~~~~~~~~~~~--~~~~~~~----~~~~~~~~---~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f 423 (468)
++.+....+.... +.+.... ........ .........+..+++||.+||+.||.+|||+.|+|+||||
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07867 241 MGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF 317 (317)
T ss_pred cCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 7766655443321 1110000 00000000 0111122346779999999999999999999999999998
No 89
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4.4e-44 Score=358.09 Aligned_cols=277 Identities=25% Similarity=0.376 Sum_probs=205.8
Q ss_pred cceEEeceecccCceEEEEEEEcCCCCEEEEEEeecccchHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEEEeec
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVLEY 216 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv~e~ 216 (468)
..|.+.+.||+|+||.||+|.+..++..||+|+.... ....|+.+++.++||||+++++++. ...+.++||||
T Consensus 66 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~--~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~~lv~e~ 138 (357)
T PHA03209 66 LGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG--TTLIEAMLLQNVNHPSVIRMKDTLV-----SGAITCMVLPH 138 (357)
T ss_pred cCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc--ccHHHHHHHHhCCCCCCcChhheEE-----eCCeeEEEEEc
Confidence 3699999999999999999999999999999975433 3346999999999999999999984 33458899999
Q ss_pred ccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCCCCCC
Q 012233 217 ISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGEPN 296 (468)
Q Consensus 217 ~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~~~~~ 296 (468)
+.++++..+.. ....+++..++.++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||++.........
T Consensus 139 ~~~~l~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~Nill~~~~-~~kl~DfG~a~~~~~~~~~ 213 (357)
T PHA03209 139 YSSDLYTYLTK---RSRPLPIDQALIIEKQILEGLRYLHA-QRIIHRDVKTENIFINDVD-QVCIGDLGAAQFPVVAPAF 213 (357)
T ss_pred cCCcHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEECCCC-CEEEecCccccccccCccc
Confidence 99887775543 34568999999999999999999998 8999999999999999888 7999999999754444444
Q ss_pred ccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCC-CCCCCCCc---------HHHHHHHHHHhCCCCHHHHhh
Q 012233 297 ISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQ-PLFPGESG---------VDQLVEIIKILGTPTREEIKC 366 (468)
Q Consensus 297 ~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~-~pf~~~~~---------~~~~~~i~~~~~~~~~~~~~~ 366 (468)
....||+.|+|||++.+.. ++.++|||||||++|||+++. ++|..... ...+..++..++..+......
T Consensus 214 ~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 292 (357)
T PHA03209 214 LGLAGTVETNAPEVLARDK-YNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRD 292 (357)
T ss_pred ccccccccccCCeecCCCC-CCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCC
Confidence 5677999999999997654 899999999999999999854 44443221 223444444444322111000
Q ss_pred cCCCCc--cCCCCcccCCCc---ccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCC
Q 012233 367 MNPNYT--EFKFPQIKAHPW---HKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDL 426 (468)
Q Consensus 367 ~~~~~~--~~~~~~~~~~~~---~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~ 426 (468)
...... -+.+......++ ...-...++.++.+||.+||++||.+|||+.|+|+||||+++
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~~~ 357 (357)
T PHA03209 293 PGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFAQL 357 (357)
T ss_pred CccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcCchhccC
Confidence 000000 000000000000 001123567889999999999999999999999999999874
No 90
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=8.2e-44 Score=360.51 Aligned_cols=278 Identities=21% Similarity=0.321 Sum_probs=211.6
Q ss_pred cceEEeceecccCceEEEEEEEc--CCCCEEEEEEeecccchHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEEEe
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCL--ETGDSVAIKKVLQDKRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVL 214 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~--~~g~~vaiK~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv~ 214 (468)
.+|.+.+.||.|+||.||+|... .++..||+|.+... ....+|+.+|+.++||||++++++| .....+|+||
T Consensus 92 ~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-~~~~~E~~il~~l~h~~iv~~~~~~-----~~~~~~~lv~ 165 (392)
T PHA03207 92 MQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-KTPGREIDILKTISHRAIINLIHAY-----RWKSTVCMVM 165 (392)
T ss_pred CceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-ccHHHHHHHHHhcCCCCccceeeeE-----eeCCEEEEEe
Confidence 46999999999999999999764 35678999987654 3456899999999999999999988 4445689999
Q ss_pred ecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCCCC
Q 012233 215 EYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGE 294 (468)
Q Consensus 215 e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~~~ 294 (468)
|++.++++..+. ....+++..++.++.||+.||.|||+ +||+||||||+||||+.++ .++|+|||++.......
T Consensus 166 e~~~~~l~~~l~----~~~~l~~~~~~~i~~ql~~aL~~LH~-~givHrDlkp~Nill~~~~-~~~l~DfG~a~~~~~~~ 239 (392)
T PHA03207 166 PKYKCDLFTYVD----RSGPLPLEQAITIQRRLLEALAYLHG-RGIIHRDVKTENIFLDEPE-NAVLGDFGAACKLDAHP 239 (392)
T ss_pred hhcCCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCCHHHEEEcCCC-CEEEccCccccccCccc
Confidence 999988877552 24678999999999999999999998 8999999999999999888 79999999997654332
Q ss_pred C---CccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCC---cHHHHHHHHHHhCCCCHHHHhhc-
Q 012233 295 P---NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGES---GVDQLVEIIKILGTPTREEIKCM- 367 (468)
Q Consensus 295 ~---~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~---~~~~~~~i~~~~~~~~~~~~~~~- 367 (468)
. .....||+.|+|||++.+.. ++.++|||||||++|||++|+.||.+.. ....+..+++.++..+.......
T Consensus 240 ~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~ 318 (392)
T PHA03207 240 DTPQCYGWSGTLETNSPELLALDP-YCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGS 318 (392)
T ss_pred ccccccccccccCccCHhHhcCCC-CCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccc
Confidence 1 23467899999999996554 8999999999999999999999997653 34566667766554332110000
Q ss_pred ---CCCCccCCCCcccCCCccccc-ccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCC
Q 012233 368 ---NPNYTEFKFPQIKAHPWHKIF-HKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLR 427 (468)
Q Consensus 368 ---~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~ 427 (468)
...+..+....-....+...+ ...++.++.+||++||..||.+|||+.++|.||||+..+
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~~~ 382 (392)
T PHA03207 319 TNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTKEP 382 (392)
T ss_pred hhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhhccc
Confidence 000001111100000111111 124677899999999999999999999999999997743
No 91
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.4e-45 Score=359.42 Aligned_cols=253 Identities=28% Similarity=0.449 Sum_probs=221.5
Q ss_pred cceEEeceecccCceEEEEEEEcCCCCEEEEEEeecc------cchHHHHHHHHHHcCCCCcccccceeeecCCCCceEE
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYL 210 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~------~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~ 210 (468)
++|..++.+|+|+||.+++++.+.++..|++|.+.-. +....+|+.+++++.|||||.+++.|. .+..++
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~----~~~~~l 79 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFE----EDGQLL 79 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchh----cCCceE
Confidence 4699999999999999999999999999999988433 234567999999999999999999994 334459
Q ss_pred EEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCcccc
Q 012233 211 NLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (468)
Q Consensus 211 ~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~ 290 (468)
||||+||.|+.+.......+ ...|++..+..|+.|++.|+.|||+ ..|+|||||+.|||++.++ .|||+|||+|+.+
T Consensus 80 ~Ivm~Y~eGg~l~~~i~~~k-~~~f~E~~i~~~~~Q~~~av~ylH~-~~iLHRDlK~~Nifltk~~-~VkLgDfGlaK~l 156 (426)
T KOG0589|consen 80 CIVMEYCEGGDLAQLIKEQK-GVLFPEERILKWFVQILLAVNYLHE-NRVLHRDLKCANIFLTKDK-KVKLGDFGLAKIL 156 (426)
T ss_pred EEEEeecCCCCHHHHHHHHh-hccccHHHHHHHHHHHHHHHHHHHh-hhhhcccchhhhhhccccC-ceeecchhhhhhc
Confidence 99999999876654333222 5779999999999999999999997 8999999999999999998 6899999999998
Q ss_pred CCCC-CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCC
Q 012233 291 VPGE-PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP 369 (468)
Q Consensus 291 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 369 (468)
.+.. ...+.+||+.||.||++.+.+ |+.++|||||||++|||++-+++|.+.+....+.+|++....|
T Consensus 157 ~~~~~~a~tvvGTp~YmcPEil~d~p-Yn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~P---------- 225 (426)
T KOG0589|consen 157 NPEDSLASTVVGTPYYMCPEILSDIP-YNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLYSP---------- 225 (426)
T ss_pred CCchhhhheecCCCcccCHHHhCCCC-CCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccCCC----------
Confidence 7776 667889999999999997765 9999999999999999999999999999999999998865444
Q ss_pred CCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCC
Q 012233 370 NYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDD 425 (468)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~ 425 (468)
++..++.+++.||+.||..+|..||++.++|.+|.+..
T Consensus 226 ------------------lp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~P~l~~ 263 (426)
T KOG0589|consen 226 ------------------LPSMYSSELRSLVKSMLRKNPEHRPSALELLRRPHLLR 263 (426)
T ss_pred ------------------CCccccHHHHHHHHHHhhcCCccCCCHHHHhhChhhhh
Confidence 33457899999999999999999999999999998874
No 92
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=2.2e-44 Score=355.06 Aligned_cols=244 Identities=27% Similarity=0.484 Sum_probs=199.8
Q ss_pred ceecccCceEEEEEEEcCCCCEEEEEEeeccc-------chHHHHHHHHHHc-CCCCcccccceeeecCCCCceEEEEEe
Q 012233 143 RVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLL-NHPNVVSLKHCFFSTTEKDELYLNLVL 214 (468)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-------~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~~~~~~lv~ 214 (468)
++||+|+||.||+|.+..+++.||||++.+.. .....|..+++.+ +||||++++++| .+...+|+||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~-----~~~~~~~lv~ 75 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCF-----QTKDRLFFVM 75 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEE-----EcCCeEEEEE
Confidence 36999999999999999999999999986532 1233577888766 799999999998 4445689999
Q ss_pred ecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCC-C
Q 012233 215 EYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP-G 293 (468)
Q Consensus 215 e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~-~ 293 (468)
||+.++.+.... .....+++..++.++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||++..... .
T Consensus 76 E~~~~~~L~~~l---~~~~~~~~~~~~~~~~qi~~aL~~LH~-~~ivHrDikp~Nill~~~~-~~kL~Dfg~~~~~~~~~ 150 (321)
T cd05591 76 EYVNGGDLMFQI---QRSRKFDEPRSRFYAAEVTLALMFLHR-HGVIYRDLKLDNILLDAEG-HCKLADFGMCKEGILNG 150 (321)
T ss_pred eCCCCCcHHHHH---HHcCCCCHHHHHHHHHHHHHHHHHHHH-CCeeccCCCHHHeEECCCC-CEEEeecccceecccCC
Confidence 999976553221 224568899999999999999999998 8999999999999999888 799999999875432 2
Q ss_pred CCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCCcc
Q 012233 294 EPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTE 373 (468)
Q Consensus 294 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 373 (468)
.......||+.|+|||++.+. .++.++|||||||++|+|++|+.||...+..+.+..+... .
T Consensus 151 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~-----------------~ 212 (321)
T cd05591 151 VTTTTFCGTPDYIAPEILQEL-EYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHD-----------------D 212 (321)
T ss_pred ccccccccCccccCHHHHcCC-CCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcC-----------------C
Confidence 233456789999999998654 4899999999999999999999999988776666655431 1
Q ss_pred CCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCC-------CHHHHhCCCCCCCC
Q 012233 374 FKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRC-------TALEACAHPFFDDL 426 (468)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~-------s~~ell~hp~f~~~ 426 (468)
.. ++..++.++.+||.+||+.||.+|+ ++.+++.||||..+
T Consensus 213 ~~------------~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~~ 260 (321)
T cd05591 213 VL------------YPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKEI 260 (321)
T ss_pred CC------------CCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCCC
Confidence 11 2234789999999999999999999 99999999999875
No 93
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-46 Score=356.79 Aligned_cols=250 Identities=26% Similarity=0.402 Sum_probs=207.6
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc-----chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNL 212 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~l 212 (468)
.|...++||+|.||.||+|.+..+++.||||++.-+. ....+|+.+|..++++||.++|+.|+... .+++
T Consensus 14 ~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~-----~Lwi 88 (467)
T KOG0201|consen 14 LYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGT-----KLWI 88 (467)
T ss_pred ccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecc-----cHHH
Confidence 4888899999999999999999999999999985432 34458999999999999999999996554 4899
Q ss_pred EeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCC
Q 012233 213 VLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP 292 (468)
Q Consensus 213 v~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~ 292 (468)
+||||.||....+. +....+.+..+..++++++.||.|||. .+.+|||||+.||||..++ .+||+|||.+..+..
T Consensus 89 iMey~~gGsv~~lL---~~~~~~~E~~i~~ilre~l~~l~ylH~-~~kiHrDIKaanil~s~~g-~vkl~DfgVa~ql~~ 163 (467)
T KOG0201|consen 89 IMEYCGGGSVLDLL---KSGNILDEFEIAVILREVLKGLDYLHS-EKKIHRDIKAANILLSESG-DVKLADFGVAGQLTN 163 (467)
T ss_pred HHHHhcCcchhhhh---ccCCCCccceeeeehHHHHHHhhhhhh-cceecccccccceeEeccC-cEEEEecceeeeeec
Confidence 99999976443222 223444777888899999999999997 8999999999999999987 799999999987755
Q ss_pred CC-CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCC
Q 012233 293 GE-PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNY 371 (468)
Q Consensus 293 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 371 (468)
.. ...+++|||.|||||++.+. .|+.++||||||++.+||.+|.+||....++..+..|-+. .|
T Consensus 164 ~~~rr~tfvGTPfwMAPEVI~~~-~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflIpk~--~P------------ 228 (467)
T KOG0201|consen 164 TVKRRKTFVGTPFWMAPEVIKQS-GYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIPKS--AP------------ 228 (467)
T ss_pred hhhccccccccccccchhhhccc-cccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEeccCC--CC------------
Confidence 43 33789999999999999854 5999999999999999999999999887664433333220 00
Q ss_pred ccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCC
Q 012233 372 TEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDL 426 (468)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~ 426 (468)
..+....++.+++||..||++||+.||+|.++|.|+|++.-
T Consensus 229 --------------P~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~a 269 (467)
T KOG0201|consen 229 --------------PRLDGDFSPPFKEFVEACLDKNPEFRPSAKELLKHKFIKRA 269 (467)
T ss_pred --------------CccccccCHHHHHHHHHHhhcCcccCcCHHHHhhhHHHHhc
Confidence 11223578899999999999999999999999999999883
No 94
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=6.4e-44 Score=353.29 Aligned_cols=277 Identities=25% Similarity=0.403 Sum_probs=205.4
Q ss_pred ccceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc-----chHHHHHHHHHHcCCCCcccccceeeecCCCCceEE
Q 012233 136 TISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYL 210 (468)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~ 210 (468)
.++|.+.+.||+|+||.||++.+..+|..||+|.+.... ..+.+|+++|+.++||||+++++++.. ...+
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~~ 78 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS-----DGEI 78 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEE-----CCEE
Confidence 356999999999999999999999999999999886432 235679999999999999999998843 3458
Q ss_pred EEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCcccc
Q 012233 211 NLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (468)
Q Consensus 211 ~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~ 290 (468)
++||||+.++.+.... .....+++..+..++.|++.||.|||+..+|+||||||+|||++.++ .+||+|||++...
T Consensus 79 ~lv~e~~~~~~L~~~l---~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~-~~kl~Dfg~~~~~ 154 (331)
T cd06649 79 SICMEHMDGGSLDQVL---KEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRG-EIKLCDFGVSGQL 154 (331)
T ss_pred EEEeecCCCCcHHHHH---HHcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCC-cEEEccCcccccc
Confidence 8999999976554322 22356889999999999999999999734699999999999999888 7999999998765
Q ss_pred CCCCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhh----
Q 012233 291 VPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKC---- 366 (468)
Q Consensus 291 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~---- 366 (468)
... ......|++.|+|||++.+. .++.++|||||||++|||++|+.||...+..+. ..++ +.+.......
T Consensus 155 ~~~-~~~~~~g~~~y~aPE~~~~~-~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~-~~~~---~~~~~~~~~~~~~~ 228 (331)
T cd06649 155 IDS-MANSFVGTRSYMSPERLQGT-HYSVQSDIWSMGLSLVELAIGRYPIPPPDAKEL-EAIF---GRPVVDGEEGEPHS 228 (331)
T ss_pred ccc-ccccCCCCcCcCCHhHhcCC-CCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHh---cccccccccCCccc
Confidence 332 23456789999999999765 489999999999999999999999987654432 2222 1111000000
Q ss_pred cCCCCcc-------CCCCc------------ccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCC
Q 012233 367 MNPNYTE-------FKFPQ------------IKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLR 427 (468)
Q Consensus 367 ~~~~~~~-------~~~~~------------~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~ 427 (468)
..+.... ..... +............+++++++||.+||++||++|||+.+++.||||+...
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~ 308 (331)
T cd06649 229 ISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRSE 308 (331)
T ss_pred cCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHHhhcc
Confidence 0000000 00000 0000000001124788999999999999999999999999999998743
No 95
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=2.7e-44 Score=355.72 Aligned_cols=247 Identities=26% Similarity=0.492 Sum_probs=196.6
Q ss_pred ceecccCceEEEEEEEcCCCCEEEEEEeeccc-------chHHHHHHHHHHc-CCCCcccccceeeecCCCCceEEEEEe
Q 012233 143 RVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLL-NHPNVVSLKHCFFSTTEKDELYLNLVL 214 (468)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-------~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~~~~~~lv~ 214 (468)
++||+|+||.||+|.+..+++.||+|++.+.. ....+|..+++.+ +||||++++++| .+...+|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~-----~~~~~~~lv~ 75 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCF-----QTESRLFFVI 75 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEE-----EcCCEEEEEE
Confidence 46999999999999999999999999986532 2244688888888 699999999988 4455689999
Q ss_pred ecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCcccc-CCC
Q 012233 215 EYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKML-VPG 293 (468)
Q Consensus 215 e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~-~~~ 293 (468)
||++++.+... ......+++..++.++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||+++.. ...
T Consensus 76 e~~~~g~L~~~---~~~~~~l~~~~~~~~~~qi~~~l~~lH~-~~ivH~dlkp~Nili~~~~-~~kL~Dfg~~~~~~~~~ 150 (329)
T cd05588 76 EFVSGGDLMFH---MQRQRKLPEEHARFYSAEISLALNFLHE-RGIIYRDLKLDNVLLDAEG-HIKLTDYGMCKEGIRPG 150 (329)
T ss_pred eCCCCCCHHHH---HHHcCCCCHHHHHHHHHHHHHHHHHHHH-CCeEecCCCHHHeEECCCC-CEEECcCccccccccCC
Confidence 99987654322 1224679999999999999999999998 8999999999999999887 7999999998753 223
Q ss_pred CCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCC--------cHHHHHHHHHHhCCCCHHHHh
Q 012233 294 EPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGES--------GVDQLVEIIKILGTPTREEIK 365 (468)
Q Consensus 294 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~--------~~~~~~~i~~~~~~~~~~~~~ 365 (468)
......+||+.|+|||++.+. .++.++|+|||||++|+|++|+.||.... ..+.+.+.+..
T Consensus 151 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~---------- 219 (329)
T cd05588 151 DTTSTFCGTPNYIAPEILRGE-DYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILE---------- 219 (329)
T ss_pred CccccccCCccccCHHHHcCC-CCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHc----------
Confidence 334457899999999999765 48999999999999999999999996321 11112221110
Q ss_pred hcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCC------HHHHhCCCCCCCCCC
Q 012233 366 CMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCT------ALEACAHPFFDDLRD 428 (468)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s------~~ell~hp~f~~~~~ 428 (468)
.... ++..++.++.+||.+||+.||.+|++ +.+++.||||..+..
T Consensus 220 ------~~~~------------~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~~~~ 270 (329)
T cd05588 220 ------KQIR------------IPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRNIDW 270 (329)
T ss_pred ------CCCC------------CCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCCCCH
Confidence 0111 33457899999999999999999997 789999999987643
No 96
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=4.9e-44 Score=345.72 Aligned_cols=251 Identities=26% Similarity=0.377 Sum_probs=199.5
Q ss_pred ecccCceEEEEEEEcCCCCEEEEEEeeccc-------chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEEEeecc
Q 012233 145 VGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVLEYI 217 (468)
Q Consensus 145 lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv~e~~ 217 (468)
||+|+||+||++.+..+|+.||+|++.... .....|+.+++.++|+||++++++| .....+|+||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~-----~~~~~~~lv~e~~ 75 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAF-----QTKTDLCLVMTIM 75 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEE-----cCCCeEEEEEeCC
Confidence 699999999999999999999999985432 2234689999999999999998887 4445689999999
Q ss_pred cchHHHHHh-hhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCCCCC-
Q 012233 218 SETVYRVSK-HYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGEP- 295 (468)
Q Consensus 218 ~~~ll~~~~-~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~~~~- 295 (468)
+++.+.... ........+++..+..++.||+.||.|||+ +||+||||||+|||++.++ .++|+|||++........
T Consensus 76 ~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~-~~i~H~dlkp~Nili~~~~-~~~l~dfg~~~~~~~~~~~ 153 (280)
T cd05608 76 NGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQ-RRIIYRDLKPENVLLDNDG-NVRISDLGLAVELKDGQSK 153 (280)
T ss_pred CCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEECCCC-CEEEeeCccceecCCCCcc
Confidence 976554332 222334568999999999999999999998 8999999999999999887 799999999976543322
Q ss_pred CccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCCccCC
Q 012233 296 NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFK 375 (468)
Q Consensus 296 ~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 375 (468)
.....||+.|+|||++.+. .++.++|||||||++|+|++|+.||...........+...... ...
T Consensus 154 ~~~~~g~~~y~aPE~~~~~-~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~-------------~~~- 218 (280)
T cd05608 154 TKGYAGTPGFMAPELLQGE-EYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILN-------------DSV- 218 (280)
T ss_pred ccccCCCcCccCHHHhcCC-CCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcc-------------cCC-
Confidence 2345789999999999765 4899999999999999999999999865433222222211100 000
Q ss_pred CCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCC-----CHHHHhCCCCCCCCCC
Q 012233 376 FPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRC-----TALEACAHPFFDDLRD 428 (468)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~-----s~~ell~hp~f~~~~~ 428 (468)
.++..+++++.+||.+||+.||.+|+ +++++++||||+++..
T Consensus 219 -----------~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~~~~ 265 (280)
T cd05608 219 -----------TYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRDLNW 265 (280)
T ss_pred -----------CCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhhcCCH
Confidence 13345889999999999999999999 8899999999998643
No 97
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=2.2e-44 Score=360.78 Aligned_cols=253 Identities=26% Similarity=0.425 Sum_probs=203.5
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc-------chHHHHHHHHHHcCCCCcccccceeeecCCCCceEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYL 210 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~ 210 (468)
+|.+.+.||+|+||.||+|.+..+++.||||++.... ....+|+.++..++||||+++++.| .+..++
T Consensus 2 ~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~-----~~~~~~ 76 (360)
T cd05627 2 DFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSF-----QDKRNL 76 (360)
T ss_pred CceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEE-----EcCCEE
Confidence 5899999999999999999999999999999985421 2345689999999999999999988 455578
Q ss_pred EEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCcccc
Q 012233 211 NLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (468)
Q Consensus 211 ~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~ 290 (468)
|+||||++++.+.... .....+++..++.++.||+.||.|||+ +||+||||||+||||+.++ .+||+|||++...
T Consensus 77 ~lv~E~~~gg~L~~~l---~~~~~l~~~~~~~~~~qi~~~L~~lH~-~givHrDLkp~NIli~~~~-~vkL~DfG~~~~~ 151 (360)
T cd05627 77 YLIMEFLPGGDMMTLL---MKKDTLSEEATQFYIAETVLAIDAIHQ-LGFIHRDIKPDNLLLDAKG-HVKLSDFGLCTGL 151 (360)
T ss_pred EEEEeCCCCccHHHHH---HhcCCCCHHHHHHHHHHHHHHHHHHHH-CCeEccCCCHHHEEECCCC-CEEEeeccCCccc
Confidence 9999999876443222 224568999999999999999999998 8999999999999999888 7999999998654
Q ss_pred CCCC------------------------------------CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHH
Q 012233 291 VPGE------------------------------------PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELL 334 (468)
Q Consensus 291 ~~~~------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell 334 (468)
.... .....+||+.|+|||++.+.. ++.++|||||||++|||+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~-~~~~~DiwSlGvilyel~ 230 (360)
T cd05627 152 KKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTG-YNKLCDWWSLGVIMYEML 230 (360)
T ss_pred ccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCC-CCCcceeccccceeeecc
Confidence 2110 012457999999999997654 899999999999999999
Q ss_pred hCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCC--
Q 012233 335 LGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRC-- 412 (468)
Q Consensus 335 ~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~-- 412 (468)
+|++||.+.+..+.+.++.... ....+|. ...+++++++||.+|+. ||.+|+
T Consensus 231 tG~~Pf~~~~~~~~~~~i~~~~---------------~~~~~p~----------~~~~s~~~~~li~~l~~-~p~~R~~~ 284 (360)
T cd05627 231 IGYPPFCSETPQETYRKVMNWK---------------ETLVFPP----------EVPISEKAKDLILRFCT-DSENRIGS 284 (360)
T ss_pred cCCCCCCCCCHHHHHHHHHcCC---------------CceecCC----------CCCCCHHHHHHHHHhcc-ChhhcCCC
Confidence 9999999887766655554310 0111111 01368899999999874 999998
Q ss_pred -CHHHHhCCCCCCCCC
Q 012233 413 -TALEACAHPFFDDLR 427 (468)
Q Consensus 413 -s~~ell~hp~f~~~~ 427 (468)
++.+++.||||+++.
T Consensus 285 ~~~~ei~~hp~f~~~~ 300 (360)
T cd05627 285 NGVEEIKSHPFFEGVD 300 (360)
T ss_pred CCHHHHhcCCCCCCCC
Confidence 489999999999864
No 98
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.5e-43 Score=362.62 Aligned_cols=274 Identities=24% Similarity=0.329 Sum_probs=206.2
Q ss_pred cceEEeceecccCceEEEEEEEcCCCCEEEEEEeecccchHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEEEeec
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVLEY 216 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv~e~ 216 (468)
..|.+.+.||+|+||.||+|.+..+++.||||.... ....+|+.+|++|+|+|||++++++.. ....++|||+
T Consensus 169 ~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~--~~~~~E~~iL~~L~HpnIv~l~~~~~~-----~~~~~lv~e~ 241 (461)
T PHA03211 169 LGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY--ASSVHEARLLRRLSHPAVLALLDVRVV-----GGLTCLVLPK 241 (461)
T ss_pred CCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc--cCHHHHHHHHHHCCCCCCCcEEEEEEE-----CCEEEEEEEc
Confidence 469999999999999999999999999999996432 334679999999999999999998743 3357899999
Q ss_pred ccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCCCC--
Q 012233 217 ISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGE-- 294 (468)
Q Consensus 217 ~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~~~-- 294 (468)
+.++++..+.. ....+++..++.++.||+.||.|||+ +||+||||||+||||+.++ .+||+|||+++......
T Consensus 242 ~~~~L~~~l~~---~~~~l~~~~~~~i~~qi~~aL~yLH~-~gIvHrDLKP~NILl~~~~-~vkL~DFGla~~~~~~~~~ 316 (461)
T PHA03211 242 YRSDLYTYLGA---RLRPLGLAQVTAVARQLLSAIDYIHG-EGIIHRDIKTENVLVNGPE-DICLGDFGAACFARGSWST 316 (461)
T ss_pred cCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHH-CCEEECcCCHHHEEECCCC-CEEEcccCCceeccccccc
Confidence 99887775543 23468999999999999999999998 8999999999999999887 79999999997653322
Q ss_pred -CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCC-------cHHHHHHHHHHhCCCCHHH---
Q 012233 295 -PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGES-------GVDQLVEIIKILGTPTREE--- 363 (468)
Q Consensus 295 -~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~-------~~~~~~~i~~~~~~~~~~~--- 363 (468)
......||+.|+|||++.+.. ++.++|||||||++|||++|..|+.... ...++.++++.........
T Consensus 317 ~~~~~~~GT~~Y~APE~~~~~~-~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~ 395 (461)
T PHA03211 317 PFHYGIAGTVDTNAPEVLAGDP-YTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQH 395 (461)
T ss_pred ccccccCCCcCCcCHHHHcCCC-CCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCC
Confidence 122457899999999997654 8999999999999999999876553321 1344555555433221100
Q ss_pred -----HhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCC
Q 012233 364 -----IKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDD 425 (468)
Q Consensus 364 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~ 425 (468)
.............+......|... ..++.++.+||.+||++||.+|||+.|+|+||||+.
T Consensus 396 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f~~ 460 (461)
T PHA03211 396 AGSRLVSQYRHRAARNRRPAYTRPAWTRY--YKLDLDVEYLVCRALTFDGARRPSAAELLRLPLFQS 460 (461)
T ss_pred cchHHHHHHHhhhhcccCCccCCcchhhh--ccccchHHHHHHHHcccChhhCcCHHHHhhCcccCC
Confidence 000000000011111112223222 146778999999999999999999999999999975
No 99
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=1.7e-43 Score=343.97 Aligned_cols=285 Identities=34% Similarity=0.594 Sum_probs=222.0
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc------chHHHHHHHHHHcC-CCCcccccceeeecCCCCceEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------RYKNRELQIMRLLN-HPNVVSLKHCFFSTTEKDELYL 210 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~------~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~~~~~ 210 (468)
+|.+.+.||+|+||.||+|.+..+|+.||||.+.... ....+|+.+++.+. ||||+++++++...........
T Consensus 2 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~ 81 (295)
T cd07837 2 AYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSL 81 (295)
T ss_pred CceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceE
Confidence 5999999999999999999999999999999875432 23457999999995 6999999998865444344568
Q ss_pred EEEeecccchHHHHHhhhhhc-CCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccc
Q 012233 211 NLVLEYISETVYRVSKHYTRM-NQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (468)
Q Consensus 211 ~lv~e~~~~~ll~~~~~~~~~-~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~ 289 (468)
|+||||+.+++...+...... ...+++..++.++.||+.||.|||+ +||+||||||+|||++.+...+||+|||++..
T Consensus 82 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~-~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~ 160 (295)
T cd07837 82 YLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHK-HGVMHRDLKPQNLLVDKQKGLLKIADLGLGRA 160 (295)
T ss_pred EEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHH-CCeeecCCChHHEEEecCCCeEEEeeccccee
Confidence 899999999877766543332 3568999999999999999999998 89999999999999998334899999999876
Q ss_pred cCCC-CCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcC
Q 012233 290 LVPG-EPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMN 368 (468)
Q Consensus 290 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 368 (468)
.... .......+++.|+|||++.+...++.++|+|||||++|+|++|..||.+.+..+.+.+++..++.+....+....
T Consensus 161 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (295)
T cd07837 161 FSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVS 240 (295)
T ss_pred cCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcchh
Confidence 5322 222234668899999998765668999999999999999999999999998888888888877776654432211
Q ss_pred CCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCC
Q 012233 369 PNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFD 424 (468)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~ 424 (468)
.......++...... .....+.+++++.+||.+||..||.+||++.+++.||||+
T Consensus 241 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~~~~ 295 (295)
T cd07837 241 KLRDWHEFPQWKPQD-LSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPYFD 295 (295)
T ss_pred hccchhhcCcccchh-HHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcCCCcC
Confidence 111111111111100 1112245789999999999999999999999999999995
No 100
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=4.4e-44 Score=352.18 Aligned_cols=245 Identities=27% Similarity=0.462 Sum_probs=196.8
Q ss_pred ceecccCceEEEEEEEcCCCCEEEEEEeeccc-------chHHHHHHHHHHc-CCCCcccccceeeecCCCCceEEEEEe
Q 012233 143 RVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLL-NHPNVVSLKHCFFSTTEKDELYLNLVL 214 (468)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-------~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~~~~~~lv~ 214 (468)
+.||+|+||.||+|.++.+|+.||+|++.... .....|..++..+ +||||+++++++ .+..++|+||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~-----~~~~~~~lv~ 75 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTF-----QTKEHLFFVM 75 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEE-----EeCCEEEEEE
Confidence 46999999999999999999999999986532 2234577777654 899999999988 4455799999
Q ss_pred ecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCC-C
Q 012233 215 EYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP-G 293 (468)
Q Consensus 215 e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~-~ 293 (468)
||+.++.+.... .....+++..+..++.||+.||+|||+ +||+||||||+|||++.++ .+||+|||+++.... .
T Consensus 76 E~~~~g~L~~~i---~~~~~~~~~~~~~~~~qi~~~l~~lH~-~~ivHrDlkp~Nil~~~~~-~~kl~Dfg~~~~~~~~~ 150 (316)
T cd05620 76 EFLNGGDLMFHI---QDKGRFDLYRATFYAAEIVCGLQFLHS-KGIIYRDLKLDNVMLDRDG-HIKIADFGMCKENVFGD 150 (316)
T ss_pred CCCCCCcHHHHH---HHcCCCCHHHHHHHHHHHHHHHHHHHH-CCeEecCCCHHHeEECCCC-CEEeCccCCCeecccCC
Confidence 999876443221 224568899999999999999999998 8999999999999999888 799999999865322 2
Q ss_pred CCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCCcc
Q 012233 294 EPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTE 373 (468)
Q Consensus 294 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 373 (468)
......+||+.|+|||++.+.. ++.++|||||||++|||++|..||.+.+..+....+... .
T Consensus 151 ~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~-----------------~ 212 (316)
T cd05620 151 NRASTFCGTPDYIAPEILQGLK-YTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVD-----------------T 212 (316)
T ss_pred CceeccCCCcCccCHHHHcCCC-CCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC-----------------C
Confidence 2334567899999999997654 899999999999999999999999877655444433220 0
Q ss_pred CCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCH-HHHhCCCCCCCCC
Q 012233 374 FKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTA-LEACAHPFFDDLR 427 (468)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~-~ell~hp~f~~~~ 427 (468)
.. ++..++.++++||.+||+.||.+|+++ +++++||||+.+.
T Consensus 213 ~~------------~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~h~~f~~~~ 255 (316)
T cd05620 213 PH------------YPRWITKESKDILEKLFERDPTRRLGVVGNIRGHPFFKTIN 255 (316)
T ss_pred CC------------CCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCCCcCCCC
Confidence 01 223478999999999999999999998 5899999999864
No 101
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=4.2e-44 Score=353.37 Aligned_cols=250 Identities=27% Similarity=0.420 Sum_probs=202.9
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeecccc-------hHHHHHHHHHHc-CCCCcccccceeeecCCCCceE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKR-------YKNRELQIMRLL-NHPNVVSLKHCFFSTTEKDELY 209 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~~-------~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~~~~ 209 (468)
+|.+.+.||+|+||.||+|.+..+++.||||++.+... ....|..++..+ .|++|+++++++ .+...
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~-----~~~~~ 75 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCF-----QTMDR 75 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEE-----ecCCE
Confidence 48899999999999999999999999999999865321 223466777766 588999998888 44456
Q ss_pred EEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccc
Q 012233 210 LNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (468)
Q Consensus 210 ~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~ 289 (468)
+|+||||++++.+... ......+++..+..++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||+++.
T Consensus 76 ~~lv~E~~~~g~L~~~---~~~~~~~~~~~~~~~~~qi~~aL~~LH~-~~ivHrDlkp~Nill~~~~-~~kL~DfG~~~~ 150 (323)
T cd05616 76 LYFVMEYVNGGDLMYQ---IQQVGRFKEPHAVFYAAEIAIGLFFLHS-KGIIYRDLKLDNVMLDSEG-HIKIADFGMCKE 150 (323)
T ss_pred EEEEEcCCCCCCHHHH---HHHcCCCCHHHHHHHHHHHHHHHHHHHH-CCEEecCCCHHHeEECCCC-cEEEccCCCcee
Confidence 8999999987644322 1224568899999999999999999998 8999999999999999888 799999999875
Q ss_pred cCC-CCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcC
Q 012233 290 LVP-GEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMN 368 (468)
Q Consensus 290 ~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 368 (468)
... .......+||+.|+|||++.+.. ++.++|||||||++|||++|+.||.+.+..+.+..+...
T Consensus 151 ~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~------------- 216 (323)
T cd05616 151 NMWDGVTTKTFCGTPDYIAPEIIAYQP-YGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEH------------- 216 (323)
T ss_pred cCCCCCccccCCCChhhcCHHHhcCCC-CCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhC-------------
Confidence 432 22334567899999999997654 899999999999999999999999987766665555431
Q ss_pred CCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCC-----HHHHhCCCCCCCCC
Q 012233 369 PNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCT-----ALEACAHPFFDDLR 427 (468)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s-----~~ell~hp~f~~~~ 427 (468)
... ++..++.++.+||.+||+.||.+|++ ..++++||||+.+.
T Consensus 217 ----~~~------------~p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~~~ 264 (323)
T cd05616 217 ----NVA------------YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYID 264 (323)
T ss_pred ----CCC------------CCCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcCCCC
Confidence 111 33458899999999999999999997 48999999999764
No 102
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-45 Score=383.23 Aligned_cols=270 Identities=29% Similarity=0.456 Sum_probs=228.3
Q ss_pred ccceEEeceecccCceEEEEEEEcCCCCEEEEEEeecc-------cchHHHHHHHHHHcCCCCcccccceeeecCCCCce
Q 012233 136 TISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD-------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDEL 208 (468)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~-------~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 208 (468)
..+|.++++||+|+||.|.+++.+.+++.||+|++.+. ...+.+|..||--.+.+-|+.|+-.| +|..
T Consensus 74 ~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAF-----QD~~ 148 (1317)
T KOG0612|consen 74 AEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAF-----QDER 148 (1317)
T ss_pred HHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHh-----cCcc
Confidence 45799999999999999999999999999999988653 34567899999999999999999888 8999
Q ss_pred EEEEEeecccch-HHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCc
Q 012233 209 YLNLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSA 287 (468)
Q Consensus 209 ~~~lv~e~~~~~-ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a 287 (468)
|+|+||||++|| ++.++..+ . .+|+..+++|+..|+.||.-||+ .|+|||||||+|||||..|| |||+|||.+
T Consensus 149 ~LYlVMdY~pGGDlltLlSk~---~-~~pE~~ArFY~aEiVlAldslH~-mgyVHRDiKPDNvLld~~GH-ikLADFGsC 222 (1317)
T KOG0612|consen 149 YLYLVMDYMPGGDLLTLLSKF---D-RLPEDWARFYTAEIVLALDSLHS-MGYVHRDIKPDNVLLDKSGH-IKLADFGSC 222 (1317)
T ss_pred ceEEEEecccCchHHHHHhhc---C-CChHHHHHHHHHHHHHHHHHHHh-ccceeccCCcceeEecccCc-EeeccchhH
Confidence 999999999865 55544433 3 79999999999999999999998 89999999999999999996 999999999
Q ss_pred cccCCCC--CCccccccCCccccccccC----CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCH
Q 012233 288 KMLVPGE--PNISYICSRYYRAPELIFG----ATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTR 361 (468)
Q Consensus 288 ~~~~~~~--~~~~~~gt~~y~aPE~~~~----~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~ 361 (468)
-.+..+. .....+|||.|++||++.. ...|+..+|+||+||++|||++|.+||+..+-.+.+.+|+...
T Consensus 223 lkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk----- 297 (1317)
T KOG0612|consen 223 LKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHK----- 297 (1317)
T ss_pred HhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchh-----
Confidence 7775333 3446799999999999942 2458999999999999999999999999999999999998741
Q ss_pred HHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCC---HHHHhCCCCCCCCCCCCCCCCCCCC
Q 012233 362 EEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCT---ALEACAHPFFDDLRDPNTCLPNGRP 438 (468)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s---~~ell~hp~f~~~~~~~~~~~~~~~ 438 (468)
..+.||.. ..+|+++++||++++. +|..|.. ++++.+||||.++.=.+-.-...|=
T Consensus 298 ----------~~l~FP~~----------~~VSeeakdLI~~ll~-~~e~RLgrngiedik~HpFF~g~~W~~iR~~~pP~ 356 (1317)
T KOG0612|consen 298 ----------ESLSFPDE----------TDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNHPFFEGIDWDNIRESVPPV 356 (1317)
T ss_pred ----------hhcCCCcc----------cccCHHHHHHHHHHhc-ChhhhcccccHHHHHhCccccCCChhhhhhcCCCC
Confidence 34455521 3489999999999886 4778887 9999999999997766666555555
Q ss_pred CCcc
Q 012233 439 LPTL 442 (468)
Q Consensus 439 ~~~~ 442 (468)
+|.+
T Consensus 357 vPev 360 (1317)
T KOG0612|consen 357 VPEV 360 (1317)
T ss_pred CCcC
Confidence 6666
No 103
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=5.6e-44 Score=352.52 Aligned_cols=244 Identities=31% Similarity=0.516 Sum_probs=198.7
Q ss_pred ceecccCceEEEEEEEc---CCCCEEEEEEeeccc--------chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEE
Q 012233 143 RVVGTGSFGVVFQAKCL---ETGDSVAIKKVLQDK--------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (468)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~---~~g~~vaiK~~~~~~--------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~ 211 (468)
+.||+|+||.||++++. .+++.||+|++.... ....+|+.+|+.++||||++++++| .....+|
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~-----~~~~~~~ 76 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAF-----QTGGKLY 76 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEE-----ecCCeEE
Confidence 57999999999999864 478899999986431 2234699999999999999999988 3444689
Q ss_pred EEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccC
Q 012233 212 LVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (468)
Q Consensus 212 lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~ 291 (468)
+||||+.++.+.... .....+++..+..++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||+++...
T Consensus 77 lv~e~~~~~~L~~~~---~~~~~~~~~~~~~~~~qi~~~l~~lH~-~~ivH~dlkp~Nil~~~~~-~~kl~Dfg~~~~~~ 151 (323)
T cd05584 77 LILEYLSGGELFMHL---EREGIFMEDTACFYLSEISLALEHLHQ-QGIIYRDLKPENILLDAQG-HVKLTDFGLCKESI 151 (323)
T ss_pred EEEeCCCCchHHHHH---HHcCCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHeEECCCC-CEEEeeCcCCeecc
Confidence 999999976553222 224567888899999999999999998 8999999999999999888 79999999987543
Q ss_pred C-CCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCC
Q 012233 292 P-GEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPN 370 (468)
Q Consensus 292 ~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 370 (468)
. ........||+.|+|||++.+.. ++.++|||||||++|||++|+.||...+....+..+...
T Consensus 152 ~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~--------------- 215 (323)
T cd05584 152 HEGTVTHTFCGTIEYMAPEILMRSG-HGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKG--------------- 215 (323)
T ss_pred cCCCcccccCCCccccChhhccCCC-CCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcC---------------
Confidence 2 22233467899999999997654 889999999999999999999999887766555554331
Q ss_pred CccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCC-----CHHHHhCCCCCCCC
Q 012233 371 YTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRC-----TALEACAHPFFDDL 426 (468)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~-----s~~ell~hp~f~~~ 426 (468)
... ++..+++++.+||.+||+.||.+|+ ++.+++.||||...
T Consensus 216 --~~~------------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~~ 262 (323)
T cd05584 216 --KLN------------LPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRHV 262 (323)
T ss_pred --CCC------------CCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCCC
Confidence 111 2345789999999999999999999 89999999999875
No 104
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=8.3e-44 Score=357.63 Aligned_cols=257 Identities=28% Similarity=0.443 Sum_probs=206.4
Q ss_pred cccceEEeceecccCceEEEEEEEcCCCCEEEEEEeecc-------cchHHHHHHHHHHcCCCCcccccceeeecCCCCc
Q 012233 135 QTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD-------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDE 207 (468)
Q Consensus 135 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~-------~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 207 (468)
...+|.+.+.||+|+||.||+|.+..+++.||+|++.+. .....+|+.+++.++||||+++++++ .+.
T Consensus 41 ~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~-----~~~ 115 (371)
T cd05622 41 KAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAF-----QDD 115 (371)
T ss_pred chhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEE-----EcC
Confidence 345799999999999999999999999999999998542 12345789999999999999999988 445
Q ss_pred eEEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCc
Q 012233 208 LYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSA 287 (468)
Q Consensus 208 ~~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a 287 (468)
.++|+||||++++.+..+.. ...+++..++.++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||++
T Consensus 116 ~~~~lv~Ey~~gg~L~~~~~----~~~~~~~~~~~~~~qi~~aL~~LH~-~~ivHrDLkp~NIll~~~~-~ikL~DfG~a 189 (371)
T cd05622 116 RYLYMVMEYMPGGDLVNLMS----NYDVPEKWARFYTAEVVLALDAIHS-MGFIHRDVKPDNMLLDKSG-HLKLADFGTC 189 (371)
T ss_pred CEEEEEEcCCCCCcHHHHHH----hcCCCHHHHHHHHHHHHHHHHHHHH-CCEEeCCCCHHHEEECCCC-CEEEEeCCce
Confidence 57999999998765543322 2458888999999999999999998 8999999999999999888 7999999999
Q ss_pred cccCCCC--CCccccccCCccccccccCCC---CCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHH
Q 012233 288 KMLVPGE--PNISYICSRYYRAPELIFGAT---EYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTRE 362 (468)
Q Consensus 288 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~---~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~ 362 (468)
....... .....+||+.|+|||++.+.. .++.++|||||||++|||++|..||.+.+....+.++....
T Consensus 190 ~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~------ 263 (371)
T cd05622 190 MKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHK------ 263 (371)
T ss_pred eEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCC------
Confidence 8664322 223567999999999986432 37889999999999999999999999877666665554311
Q ss_pred HHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCC--CCCHHHHhCCCCCCCCC
Q 012233 363 EIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSL--RCTALEACAHPFFDDLR 427 (468)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~--R~s~~ell~hp~f~~~~ 427 (468)
....+|. ...++..+++||.+||..++.+ |+++.++++||||++..
T Consensus 264 ---------~~~~~~~----------~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~~~~~~ 311 (371)
T cd05622 264 ---------NSLTFPD----------DNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQ 311 (371)
T ss_pred ---------CcccCCC----------cCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCcccCCCC
Confidence 0111221 1358899999999999854443 78999999999998853
No 105
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=6.9e-44 Score=350.74 Aligned_cols=245 Identities=29% Similarity=0.484 Sum_probs=196.7
Q ss_pred ceecccCceEEEEEEEcCCCCEEEEEEeeccc-------chHHHHHHHHHH-cCCCCcccccceeeecCCCCceEEEEEe
Q 012233 143 RVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRL-LNHPNVVSLKHCFFSTTEKDELYLNLVL 214 (468)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-------~~~~~E~~il~~-l~hpnIv~l~~~~~~~~~~~~~~~~lv~ 214 (468)
+.||+|+||.||+|.+..+++.||||++.... .....|..++.. ++||||+++++++ ....++|+||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~-----~~~~~~~lv~ 75 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTF-----QTKEHLFFVM 75 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEE-----EcCCEEEEEE
Confidence 36999999999999999999999999986532 112345566654 4799999999888 4445689999
Q ss_pred ecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCCC-
Q 012233 215 EYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPG- 293 (468)
Q Consensus 215 e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~~- 293 (468)
||+.++.+.... .....+++..++.++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||+++.....
T Consensus 76 e~~~gg~L~~~~---~~~~~~~~~~~~~~~~qi~~al~~LH~-~~ivH~dlkp~Nill~~~~-~~kL~Dfg~a~~~~~~~ 150 (316)
T cd05592 76 EYLNGGDLMFHI---QSSGRFDEARARFYAAEIICGLQFLHK-KGIIYRDLKLDNVLLDKDG-HIKIADFGMCKENMNGE 150 (316)
T ss_pred cCCCCCcHHHHH---HHcCCCCHHHHHHHHHHHHHHHHHHHH-CCEEeCCCCHHHeEECCCC-CEEEccCcCCeECCCCC
Confidence 999876554222 224568999999999999999999998 8999999999999999888 7999999999764322
Q ss_pred CCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCCcc
Q 012233 294 EPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTE 373 (468)
Q Consensus 294 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 373 (468)
......+||+.|+|||++.+.. ++.++|||||||++|||++|..||.+.+..+.+..+... .
T Consensus 151 ~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~-----------------~ 212 (316)
T cd05592 151 GKASTFCGTPDYIAPEILKGQK-YNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILND-----------------R 212 (316)
T ss_pred CccccccCCccccCHHHHcCCC-CCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC-----------------C
Confidence 2334567899999999997654 899999999999999999999999987765555444320 0
Q ss_pred CCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCH-HHHhCCCCCCCCC
Q 012233 374 FKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTA-LEACAHPFFDDLR 427 (468)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~-~ell~hp~f~~~~ 427 (468)
..++..++.++.+||.+||+.||.+|+++ .++++||||+.+.
T Consensus 213 ------------~~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~h~~~~~~~ 255 (316)
T cd05592 213 ------------PHFPRWISKEAKDCLSKLFERDPTKRLGVDGDIRQHPFFRGID 255 (316)
T ss_pred ------------CCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCcccCCCC
Confidence 01234578899999999999999999986 4888999999864
No 106
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=6.4e-44 Score=351.34 Aligned_cols=245 Identities=28% Similarity=0.496 Sum_probs=199.8
Q ss_pred ceecccCceEEEEEEEcCCCCEEEEEEeeccc-------chHHHHHHHHHHc-CCCCcccccceeeecCCCCceEEEEEe
Q 012233 143 RVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLL-NHPNVVSLKHCFFSTTEKDELYLNLVL 214 (468)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-------~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~~~~~~lv~ 214 (468)
+.||+|+||.||+|.+..+++.||||++.+.. ....+|..+++.+ +||||+++++++ .+..++|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~-----~~~~~~~lv~ 75 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCF-----QTKDRLFFVM 75 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEE-----EcCCEEEEEE
Confidence 46999999999999999999999999986532 2234688888877 699999999988 4445689999
Q ss_pred ecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccC-CC
Q 012233 215 EYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV-PG 293 (468)
Q Consensus 215 e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~-~~ 293 (468)
||+.++.+.... .....+++..+..++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||+++... ..
T Consensus 76 e~~~~~~L~~~~---~~~~~l~~~~~~~~~~qi~~~l~~LH~-~~ivH~dlkp~Nill~~~~-~~kl~Dfg~~~~~~~~~ 150 (318)
T cd05570 76 EYVNGGDLMFHI---QRSGRFDEPRARFYAAEIVLGLQFLHE-RGIIYRDLKLDNVLLDSEG-HIKIADFGMCKEGILGG 150 (318)
T ss_pred cCCCCCCHHHHH---HHcCCCCHHHHHHHHHHHHHHHHHHHh-CCeEccCCCHHHeEECCCC-cEEecccCCCeecCcCC
Confidence 999876554222 224568999999999999999999998 8999999999999999888 79999999986532 22
Q ss_pred CCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCCcc
Q 012233 294 EPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTE 373 (468)
Q Consensus 294 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 373 (468)
......+|++.|+|||++.+.. ++.++|||||||++|+|++|+.||.+.+.......+... .
T Consensus 151 ~~~~~~~g~~~y~aPE~~~~~~-~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~-----------------~ 212 (318)
T cd05570 151 VTTSTFCGTPDYIAPEILSYQP-YGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILED-----------------E 212 (318)
T ss_pred CcccceecCccccCHHHhcCCC-CCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcC-----------------C
Confidence 2334467899999999997654 899999999999999999999999877755544443320 1
Q ss_pred CCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCH-----HHHhCCCCCCCCC
Q 012233 374 FKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTA-----LEACAHPFFDDLR 427 (468)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~-----~ell~hp~f~~~~ 427 (468)
.. ++..+++++.+||.+||+.||.+||++ .+++.||||+.+.
T Consensus 213 ~~------------~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~~~ 259 (318)
T cd05570 213 VR------------YPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFREID 259 (318)
T ss_pred CC------------CCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCCcCCCC
Confidence 11 234578999999999999999999999 9999999998864
No 107
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=1.3e-43 Score=351.05 Aligned_cols=258 Identities=26% Similarity=0.428 Sum_probs=204.4
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeecc-------cchHHHHHHHHHHcCCCCcccccceeeecCCCCceEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD-------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYL 210 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~-------~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~ 210 (468)
+|.+.+.||+|+||.||++++..+++.||+|++.+. ...+.+|+.+++.++|+||++++++| .+..++
T Consensus 2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~~ 76 (331)
T cd05597 2 DFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAF-----QDENNL 76 (331)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEE-----ecCCeE
Confidence 599999999999999999999999999999998642 12345789999999999999999988 445579
Q ss_pred EEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCcccc
Q 012233 211 NLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (468)
Q Consensus 211 ~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~ 290 (468)
|+||||+.++.+.... ......+++..++.++.||+.||+|||+ +||+||||||+|||++.++ .+||+|||++...
T Consensus 77 ~lv~e~~~g~~L~~~l--~~~~~~~~~~~~~~~~~qi~~~l~~lH~-~~ivH~dlkp~Nill~~~~-~~kl~Dfg~~~~~ 152 (331)
T cd05597 77 YLVMDYYVGGDLLTLL--SKFEDRLPEDMARFYLAEMVLAIDSVHQ-LGYVHRDIKPDNVLLDKNG-HIRLADFGSCLRL 152 (331)
T ss_pred EEEEecCCCCcHHHHH--HHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCeEECCCCHHHEEECCCC-CEEEEECCceeec
Confidence 9999999865443222 1224568999999999999999999998 8999999999999999888 7999999998765
Q ss_pred CCCCC--CccccccCCccccccccC----CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHH
Q 012233 291 VPGEP--NISYICSRYYRAPELIFG----ATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEI 364 (468)
Q Consensus 291 ~~~~~--~~~~~gt~~y~aPE~~~~----~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 364 (468)
..... .....||+.|+|||++.+ ...++.++|||||||++|+|++|+.||.+.+..+.+..+....
T Consensus 153 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~-------- 224 (331)
T cd05597 153 LADGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHK-------- 224 (331)
T ss_pred CCCCCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCC--------
Confidence 43322 123468999999999863 2347889999999999999999999998877666655554311
Q ss_pred hhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCC--CCCHHHHhCCCCCCCCCC
Q 012233 365 KCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSL--RCTALEACAHPFFDDLRD 428 (468)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~--R~s~~ell~hp~f~~~~~ 428 (468)
..+.++. ....+++++++||++||..++.+ |+++.++++||||.++..
T Consensus 225 -------~~~~~~~---------~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~~~~~~~ 274 (331)
T cd05597 225 -------EHFQFPP---------DVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHPFFEGIDW 274 (331)
T ss_pred -------CcccCCC---------ccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCCCCCCCCH
Confidence 0011111 11347899999999999764444 889999999999988643
No 108
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=4.7e-43 Score=341.56 Aligned_cols=283 Identities=37% Similarity=0.637 Sum_probs=223.2
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeecccc---------hHHHHHHHHHHcCCCCcccccceeeecCCCCce
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKR---------YKNRELQIMRLLNHPNVVSLKHCFFSTTEKDEL 208 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~~---------~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 208 (468)
+|.+.+.||.|+||.||+|.+..+|+.||||.+..... ....|+.+++.++|+||+++++++ .+..
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~-----~~~~ 75 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVF-----GHKS 75 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhhee-----ecCC
Confidence 38889999999999999999999999999999864422 234689999999999999999998 3445
Q ss_pred EEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCcc
Q 012233 209 YLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAK 288 (468)
Q Consensus 209 ~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~ 288 (468)
++++||||+.+++...+... ...+++..++.++.||+.||.|||+ +||+|+||||+|||++.++ .++|+|||++.
T Consensus 76 ~~~lv~e~~~~~L~~~i~~~---~~~~~~~~~~~~~~qi~~al~~lH~-~~i~H~dl~p~nill~~~~-~~~l~dfg~~~ 150 (298)
T cd07841 76 NINLVFEFMETDLEKVIKDK---SIVLTPADIKSYMLMTLRGLEYLHS-NWILHRDLKPNNLLIASDG-VLKLADFGLAR 150 (298)
T ss_pred EEEEEEcccCCCHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHh-CCeeecCCChhhEEEcCCC-CEEEccceeee
Confidence 68999999966665544321 1368999999999999999999998 8999999999999999887 79999999997
Q ss_pred ccCCCC-CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhc
Q 012233 289 MLVPGE-PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCM 367 (468)
Q Consensus 289 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 367 (468)
...... ......+++.|+|||.+.+...++.++|+|||||++|+|++|.+||.+.+..+.+.++...++.+....+...
T Consensus 151 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (298)
T cd07841 151 SFGSPNRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGV 230 (298)
T ss_pred eccCCCccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhc
Confidence 764432 2233456888999999866556889999999999999999999999988888888888887777665554322
Q ss_pred CCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCCCCCC
Q 012233 368 NPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNT 431 (468)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~~~~~ 431 (468)
...............+. .......+.++.+||.+||..||.+|||+.+++.||||++...+..
T Consensus 231 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~~~~~~~ 293 (298)
T cd07841 231 TSLPDYVEFKPFPPTPL-KQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFSNDPAPTP 293 (298)
T ss_pred ccccccccccccCCcch-hhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCccccCCCCCCC
Confidence 11111111111111111 1233456889999999999999999999999999999999877764
No 109
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=5.1e-43 Score=338.85 Aligned_cols=276 Identities=36% Similarity=0.648 Sum_probs=216.2
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc------chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~ 211 (468)
+|++.+.||+|+||.||+|.+..+|+.||+|.+.... ....+|+.+++.++|+||+++++++ .....++
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~-----~~~~~~~ 76 (286)
T cd07847 2 KYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVF-----RRKRKLH 76 (286)
T ss_pred ceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEE-----eeCCEEE
Confidence 5999999999999999999999999999999875332 2345799999999999999999988 4445688
Q ss_pred EEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccC
Q 012233 212 LVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (468)
Q Consensus 212 lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~ 291 (468)
+||||++++++..... ....+++..++.++.||+.||.|||+ .||+|+||||+||+++.++ .++|+|||++....
T Consensus 77 ~v~e~~~~~~l~~~~~---~~~~~~~~~~~~~~~ql~~~l~~LH~-~~i~H~dl~p~nil~~~~~-~~~l~dfg~~~~~~ 151 (286)
T cd07847 77 LVFEYCDHTVLNELEK---NPRGVPEHLIKKIIWQTLQAVNFCHK-HNCIHRDVKPENILITKQG-QIKLCDFGFARILT 151 (286)
T ss_pred EEEeccCccHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHH-CCceecCCChhhEEEcCCC-cEEECccccceecC
Confidence 9999999987764432 24568999999999999999999998 8999999999999999888 79999999998764
Q ss_pred CCC-CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcC--
Q 012233 292 PGE-PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMN-- 368 (468)
Q Consensus 292 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~-- 368 (468)
... ......++..|+|||.+.+...++.++|+|||||++|+|++|..||.+.+..+....+....+...........
T Consensus 152 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (286)
T cd07847 152 GPGDDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTN 231 (286)
T ss_pred CCcccccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccc
Confidence 433 22345678899999998765668899999999999999999999999888877777776655543332111110
Q ss_pred CCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCC
Q 012233 369 PNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (468)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f 423 (468)
..+.....+......-.......++..+.+||.+||+.||.+||++.|++.||||
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~f 286 (286)
T cd07847 232 QFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF 286 (286)
T ss_pred cccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence 1111112222111111111234578999999999999999999999999999998
No 110
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=4.5e-43 Score=339.23 Aligned_cols=276 Identities=39% Similarity=0.716 Sum_probs=224.1
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc------chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~ 211 (468)
+|.+.+.||.|+||.||+|.+..+|..||+|++.... ....+|+.+++.++||||+++++++ .+..+.+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~~~ 75 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVF-----PHGSGFV 75 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEE-----ecCCeeE
Confidence 4899999999999999999999999999999886432 2455799999999999999999988 4455689
Q ss_pred EEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccC
Q 012233 212 LVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (468)
Q Consensus 212 lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~ 291 (468)
+||||+++++...+... ...+++..++.++.||+.||.|||+ .||+|+||||+||+++.++ .++|+|||++....
T Consensus 76 ~v~e~~~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dl~p~ni~~~~~~-~~~l~dfg~~~~~~ 150 (286)
T cd07832 76 LVMEYMPSDLSEVLRDE---ERPLPEAQVKSYMRMLLKGVAYMHA-NGIMHRDLKPANLLISADG-VLKIADFGLARLFS 150 (286)
T ss_pred EEecccCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCcCHHHEEEcCCC-cEEEeeeeeccccc
Confidence 99999966666544322 3568999999999999999999998 8999999999999999887 79999999987664
Q ss_pred CCC--CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcC-
Q 012233 292 PGE--PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMN- 368 (468)
Q Consensus 292 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~- 368 (468)
... ......++..|+|||.+.+...++.++|||||||++|+|++|.+||.+......+..+...++.+....+....
T Consensus 151 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (286)
T cd07832 151 EEEPRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTS 230 (286)
T ss_pred CCCCCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccC
Confidence 332 13345789999999998766667899999999999999999999999888888888888888887765554322
Q ss_pred -CCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCC
Q 012233 369 -PNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFD 424 (468)
Q Consensus 369 -~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~ 424 (468)
+.+....++......+.. ..+..+.++.+||.+||+.||.+|||+++++.||||.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~~ 286 (286)
T cd07832 231 LPDYNKITFPESKPIPLEE-IFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYFT 286 (286)
T ss_pred cchhhcccCCCCCcchHHH-hCCCccHHHHHHHHHHhccChhhCCCHHHHhhCcCcC
Confidence 222333333333333322 2345679999999999999999999999999999994
No 111
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=1.1e-43 Score=349.38 Aligned_cols=245 Identities=28% Similarity=0.476 Sum_probs=196.6
Q ss_pred ceecccCceEEEEEEEcCCCCEEEEEEeeccc-------chHHHHHHHHHH-cCCCCcccccceeeecCCCCceEEEEEe
Q 012233 143 RVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRL-LNHPNVVSLKHCFFSTTEKDELYLNLVL 214 (468)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-------~~~~~E~~il~~-l~hpnIv~l~~~~~~~~~~~~~~~~lv~ 214 (468)
+.||+|+||.||+|.+..+++.||||++.... .....|..+++. ++||||+++++++. +..++|+||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~-----~~~~~~lv~ 75 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQ-----TKENLFFVM 75 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEE-----eCCEEEEEE
Confidence 46999999999999999999999999986532 123356777765 48999999999883 444689999
Q ss_pred ecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCC-C
Q 012233 215 EYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP-G 293 (468)
Q Consensus 215 e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~-~ 293 (468)
||+.++.+.... .....+++..+..++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||++..... .
T Consensus 76 ey~~~g~L~~~l---~~~~~~~~~~~~~~~~qi~~al~~LH~-~~ivHrdikp~Nil~~~~~-~~kl~Dfg~~~~~~~~~ 150 (316)
T cd05619 76 EYLNGGDLMFHI---QSCHKFDLPRATFYAAEIICGLQFLHS-KGIVYRDLKLDNILLDTDG-HIKIADFGMCKENMLGD 150 (316)
T ss_pred eCCCCCcHHHHH---HHcCCCCHHHHHHHHHHHHHHHHHHHh-CCeEeCCCCHHHEEECCCC-CEEEccCCcceECCCCC
Confidence 999876443222 223568889999999999999999998 8999999999999999888 799999999875422 2
Q ss_pred CCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCCcc
Q 012233 294 EPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTE 373 (468)
Q Consensus 294 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 373 (468)
.......||+.|+|||++.+.. ++.++|||||||++|+|++|..||.+.+..+.+..+... .
T Consensus 151 ~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~-----------------~ 212 (316)
T cd05619 151 AKTCTFCGTPDYIAPEILLGQK-YNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMD-----------------N 212 (316)
T ss_pred CceeeecCCccccCHHHHcCCC-CCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC-----------------C
Confidence 2334567899999999997654 899999999999999999999999887655544433220 0
Q ss_pred CCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHH-HHhCCCCCCCCC
Q 012233 374 FKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTAL-EACAHPFFDDLR 427 (468)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~-ell~hp~f~~~~ 427 (468)
.. ++..++.++++||.+||+.||.+|+++. ++++||||+.+.
T Consensus 213 ~~------------~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~h~~~~~~~ 255 (316)
T cd05619 213 PC------------YPRWLTREAKDILVKLFVREPERRLGVKGDIRQHPFFREID 255 (316)
T ss_pred CC------------CCccCCHHHHHHHHHHhccCHhhcCCChHHHHcCcccCCCC
Confidence 01 2234788999999999999999999996 899999999875
No 112
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=5.1e-44 Score=352.82 Aligned_cols=245 Identities=28% Similarity=0.468 Sum_probs=196.8
Q ss_pred ceecccCceEEEEEEEcCCCCEEEEEEeecccc-------hHHHHH-HHHHHcCCCCcccccceeeecCCCCceEEEEEe
Q 012233 143 RVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKR-------YKNREL-QIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVL 214 (468)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~~-------~~~~E~-~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv~ 214 (468)
+.||+|+||+||+|.+..+|+.||||++..... ...+|. .+++.++||||+++++++ .+...+|+||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~-----~~~~~~~lv~ 75 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSF-----QTADKLYFVL 75 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEE-----EeCCEEEEEE
Confidence 469999999999999999999999999864321 112233 356789999999999888 3444689999
Q ss_pred ecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCC-C
Q 012233 215 EYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP-G 293 (468)
Q Consensus 215 e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~-~ 293 (468)
||+.++.+.... .....+++..++.++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||++..... .
T Consensus 76 e~~~~g~L~~~l---~~~~~~~~~~~~~~~~qi~~~l~~lH~-~givH~dikp~NIll~~~~-~~kl~Dfg~~~~~~~~~ 150 (323)
T cd05575 76 DYVNGGELFFHL---QRERSFPEPRARFYAAEIASALGYLHS-LNIIYRDLKPENILLDSQG-HVVLTDFGLCKEGIEHS 150 (323)
T ss_pred cCCCCCCHHHHH---HhcCCCCHHHHHHHHHHHHHHHHHHHH-CCeEeCCCCHHHeEECCCC-cEEEeccCCCcccccCC
Confidence 999976543222 224568899999999999999999998 8999999999999999888 799999999875422 2
Q ss_pred CCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCCcc
Q 012233 294 EPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTE 373 (468)
Q Consensus 294 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 373 (468)
......+||+.|+|||++.+.. ++.++|||||||++|+|++|..||...+..+.+..+... .
T Consensus 151 ~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~-----------------~ 212 (323)
T cd05575 151 KTTSTFCGTPEYLAPEVLRKQP-YDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNK-----------------P 212 (323)
T ss_pred CccccccCChhhcChhhhcCCC-CCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcC-----------------C
Confidence 2334567899999999997654 899999999999999999999999887765555544331 0
Q ss_pred CCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCH----HHHhCCCCCCCCC
Q 012233 374 FKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTA----LEACAHPFFDDLR 427 (468)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~----~ell~hp~f~~~~ 427 (468)
.. ++..+++.+.+||.+||+.||.+||++ .+++.||||..+.
T Consensus 213 ~~------------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~~~~~ 258 (323)
T cd05575 213 LR------------LKPNISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSSIN 258 (323)
T ss_pred CC------------CCCCCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCcCCCC
Confidence 00 234578999999999999999999987 6999999998754
No 113
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=1.1e-43 Score=351.39 Aligned_cols=246 Identities=27% Similarity=0.506 Sum_probs=194.8
Q ss_pred ceecccCceEEEEEEEcCCCCEEEEEEeeccc-------chHHHHHHHHHHc-CCCCcccccceeeecCCCCceEEEEEe
Q 012233 143 RVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLL-NHPNVVSLKHCFFSTTEKDELYLNLVL 214 (468)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-------~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~~~~~~lv~ 214 (468)
+.||+|+||.||+|.+..+++.||+|++.+.. ....+|+.++..+ +||||+++++++ .....+|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~-----~~~~~~~lv~ 75 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCF-----QTESRLFFVI 75 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEE-----EeCCEEEEEE
Confidence 46999999999999999999999999986532 1234677777766 799999999988 3445689999
Q ss_pred ecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccC-CC
Q 012233 215 EYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV-PG 293 (468)
Q Consensus 215 e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~-~~ 293 (468)
||+.++.+... ......+++..++.++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||+++... ..
T Consensus 76 E~~~~~~L~~~---~~~~~~l~~~~~~~i~~qi~~~l~~lH~-~~ivH~Dikp~Nili~~~~-~~kL~DfG~~~~~~~~~ 150 (329)
T cd05618 76 EYVNGGDLMFH---MQRQRKLPEEHARFYSAEISLALNYLHE-RGIIYRDLKLDNVLLDSEG-HIKLTDYGMCKEGLRPG 150 (329)
T ss_pred eCCCCCCHHHH---HHHcCCCCHHHHHHHHHHHHHHHHHHHH-CCeeeCCCCHHHEEECCCC-CEEEeeCCccccccCCC
Confidence 99997655422 2224578999999999999999999998 8999999999999999888 79999999987532 22
Q ss_pred CCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCC--------cHHHHHHHHHHhCCCCHHHHh
Q 012233 294 EPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGES--------GVDQLVEIIKILGTPTREEIK 365 (468)
Q Consensus 294 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~--------~~~~~~~i~~~~~~~~~~~~~ 365 (468)
.......||+.|+|||++.+.. ++.++|||||||++|+|++|..||.... ..+.+.+.+..
T Consensus 151 ~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~---------- 219 (329)
T cd05618 151 DTTSTFCGTPNYIAPEILRGED-YGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE---------- 219 (329)
T ss_pred CccccccCCccccCHHHHcCCC-CCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhc----------
Confidence 2334568999999999997654 8999999999999999999999995311 11112111110
Q ss_pred hcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCC------HHHHhCCCCCCCCC
Q 012233 366 CMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCT------ALEACAHPFFDDLR 427 (468)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s------~~ell~hp~f~~~~ 427 (468)
... .++..++..+.+||.+||+.||.+|++ +.++++||||+.+.
T Consensus 220 ------~~~------------~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~~~ 269 (329)
T cd05618 220 ------KQI------------RIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVD 269 (329)
T ss_pred ------CCC------------CCCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCCCC
Confidence 011 134557899999999999999999998 57999999998763
No 114
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.3e-45 Score=347.57 Aligned_cols=263 Identities=29% Similarity=0.414 Sum_probs=217.1
Q ss_pred CCCcccceEEeceecccCceEEEEEEEcCCCCEEEEEEeecc-------cchHHHHHHHHHHcCCCCcccccceeeecCC
Q 012233 132 QPKQTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD-------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTE 204 (468)
Q Consensus 132 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~-------~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 204 (468)
+|.....|..-++||+|+||.||-|+.+.+|+.||+|++.+. +....+|..||.+++.+.||.+--.|
T Consensus 180 qpvt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAf----- 254 (591)
T KOG0986|consen 180 QPVTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAF----- 254 (591)
T ss_pred hhccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeee-----
Confidence 444556788999999999999999999999999999977332 23345799999999999999997777
Q ss_pred CCceEEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeee
Q 012233 205 KDELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDF 284 (468)
Q Consensus 205 ~~~~~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DF 284 (468)
+....+|+||..|+||-+.... +.-.+..|++..++.|+.+|+.||.+||+ .+||+|||||+|||+|.+| .|+|+|+
T Consensus 255 eTkd~LClVLtlMNGGDLkfHi-yn~g~~gF~e~ra~FYAAEi~cGLehlH~-~~iVYRDLKPeNILLDd~G-hvRISDL 331 (591)
T KOG0986|consen 255 ETKDALCLVLTLMNGGDLKFHI-YNHGNPGFDEQRARFYAAEIICGLEHLHR-RRIVYRDLKPENILLDDHG-HVRISDL 331 (591)
T ss_pred cCCCceEEEEEeecCCceeEEe-eccCCCCCchHHHHHHHHHHHhhHHHHHh-cceeeccCChhheeeccCC-CeEeecc
Confidence 3344599999999988665433 23334689999999999999999999998 8999999999999999999 4999999
Q ss_pred cCccccCCCCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHH
Q 012233 285 GSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEI 364 (468)
Q Consensus 285 G~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 364 (468)
|+|..+..+.+....+||..|||||++.+.. |+...|+|||||+||||+.|+.||........-.++-+..-..
T Consensus 332 GLAvei~~g~~~~~rvGT~GYMAPEvl~ne~-Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~----- 405 (591)
T KOG0986|consen 332 GLAVEIPEGKPIRGRVGTVGYMAPEVLQNEV-YDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLED----- 405 (591)
T ss_pred ceEEecCCCCccccccCcccccCHHHHcCCc-ccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcc-----
Confidence 9999999888888889999999999997665 9999999999999999999999998654333222222211111
Q ss_pred hhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCC-----CHHHHhCCCCCCCCCC
Q 012233 365 KCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRC-----TALEACAHPFFDDLRD 428 (468)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~-----s~~ell~hp~f~~~~~ 428 (468)
+ ..++...|+++++|++.+|++||.+|. ++.++.+||||+++.-
T Consensus 406 --------~------------~ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~lnw 454 (591)
T KOG0986|consen 406 --------P------------EEYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDLNW 454 (591)
T ss_pred --------h------------hhcccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCcccccCCH
Confidence 1 114466899999999999999999998 6889999999999643
No 115
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=3e-43 Score=342.21 Aligned_cols=279 Identities=37% Similarity=0.624 Sum_probs=224.5
Q ss_pred cceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc------chHHHHHHHHHHcCCCCcccccceeeecCCCCceEE
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYL 210 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~ 210 (468)
.+|.+.+.||.|+||.||+|.+..+++.+|+|.+.... ....+|+.+++.++||||+++++++.... ..+.
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~---~~~~ 81 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSN---LDKI 81 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecC---CCcE
Confidence 35999999999999999999999999999999885332 12346999999999999999999875431 2468
Q ss_pred EEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCcccc
Q 012233 211 NLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (468)
Q Consensus 211 ~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~ 290 (468)
|+||||+.+++..++... ...+++..++.++.||+.||.|||+ .||+|+||||+|||++.++ .++|+|||++...
T Consensus 82 ~lv~e~~~~~L~~~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~-~~i~H~dl~p~nili~~~~-~~~l~d~g~~~~~ 156 (293)
T cd07843 82 YMVMEYVEHDLKSLMETM---KQPFLQSEVKCLMLQLLSGVAHLHD-NWILHRDLKTSNLLLNNRG-ILKICDFGLAREY 156 (293)
T ss_pred EEEehhcCcCHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHH-CCeeeccCCHHHEEECCCC-cEEEeecCceeec
Confidence 999999998776654432 2368999999999999999999998 8999999999999999887 7999999998766
Q ss_pred CCC-CCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcC-
Q 012233 291 VPG-EPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMN- 368 (468)
Q Consensus 291 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~- 368 (468)
... .......+++.|+|||.+.+...++.++|+|||||++|+|++|.+||...+..+.+.+++...+.|....+....
T Consensus 157 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (293)
T cd07843 157 GSPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSE 236 (293)
T ss_pred cCCccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhc
Confidence 443 223345678899999998766557899999999999999999999999999888889898888888776665432
Q ss_pred -CCCccCCCCcccCCCcccccccC-CCHHHHHHHHHhcccCCCCCCCHHHHhCCCCC
Q 012233 369 -PNYTEFKFPQIKAHPWHKIFHKR-MPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (468)
Q Consensus 369 -~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f 423 (468)
+......+.......+...++.. +++.+.+||++||+.||++|||+.|++.||||
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~f 293 (293)
T cd07843 237 LPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF 293 (293)
T ss_pred cchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcCCCC
Confidence 11111222222222333444444 68999999999999999999999999999998
No 116
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=5.5e-43 Score=338.58 Aligned_cols=275 Identities=35% Similarity=0.651 Sum_probs=217.2
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc------chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~ 211 (468)
+|.+.+.||.|+||.||+|.+..+|..||||.+.... ....+|++++++++||||+++++++ .+....+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~~~~ 75 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVI-----HTENKLY 75 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhc-----ccCCcEE
Confidence 3889999999999999999999999999999885432 2356799999999999999999988 4445689
Q ss_pred EEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccC
Q 012233 212 LVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (468)
Q Consensus 212 lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~ 291 (468)
+||||+.+++...+... ....+++..++.++.|++.||+|||+ .|++|+||+|+||+++.++ .+||+|||++....
T Consensus 76 ~v~e~~~~~l~~~~~~~--~~~~l~~~~~~~~~~~i~~~l~~lh~-~~i~H~~l~p~nill~~~~-~~~l~dfg~~~~~~ 151 (284)
T cd07860 76 LVFEFLHQDLKKFMDAS--PLSGIPLPLIKSYLFQLLQGLAFCHS-HRVLHRDLKPQNLLINTEG-AIKLADFGLARAFG 151 (284)
T ss_pred EEeeccccCHHHHHHhC--CCCCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEECCCC-CEEEeeccchhhcc
Confidence 99999987766554332 23568899999999999999999998 8999999999999999888 79999999987653
Q ss_pred CCC-CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcC--
Q 012233 292 PGE-PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMN-- 368 (468)
Q Consensus 292 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~-- 368 (468)
... ......+++.|+|||++.+...++.++|||||||++|+|++|..||...+..+.+.++++..+.+....+....
T Consensus 152 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (284)
T cd07860 152 VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSL 231 (284)
T ss_pred cCccccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHH
Confidence 322 22334568899999998766557889999999999999999999999988888888888887777654332110
Q ss_pred CCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCC
Q 012233 369 PNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (468)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f 423 (468)
+.+. ..++........ ...+.+++++++||.+||+.||.+|||+.+++.||||
T Consensus 232 ~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~f 284 (284)
T cd07860 232 PDYK-PSFPKWARQDFS-KVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF 284 (284)
T ss_pred HHHH-hhcccccccCHH-HHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence 0000 011111111111 1234578899999999999999999999999999998
No 117
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=5.7e-43 Score=340.39 Aligned_cols=283 Identities=34% Similarity=0.596 Sum_probs=221.4
Q ss_pred cceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc------chHHHHHHHHHHcCCCCcccccceeeecCCCCceEE
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYL 210 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~ 210 (468)
.+|.+.+.||.|+||.||+|.+..+|+.||+|.+.... ....+|+++++.++||||+++++++ .+..+.
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~ 76 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVV-----HSEKRL 76 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEE-----ecCCeE
Confidence 35999999999999999999999999999999875321 2345799999999999999999988 444568
Q ss_pred EEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCcccc
Q 012233 211 NLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (468)
Q Consensus 211 ~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~ 290 (468)
|+||||++++++..+... ....+++..++.++.||+.||+|||+ +||+|+||+|+||+++..+..+||+|||++...
T Consensus 77 ~lv~e~~~~~l~~~~~~~--~~~~~~~~~~~~~~~qi~~aL~~LH~-~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~ 153 (294)
T PLN00009 77 YLVFEYLDLDLKKHMDSS--PDFAKNPRLIKTYLYQILRGIAYCHS-HRVLHRDLKPQNLLIDRRTNALKLADFGLARAF 153 (294)
T ss_pred EEEEecccccHHHHHHhC--CCCCcCHHHHHHHHHHHHHHHHHHHh-CCeeCCCCCcceEEEECCCCEEEEccccccccc
Confidence 999999998777654332 22335788888999999999999998 899999999999999865557999999999755
Q ss_pred CCCC-CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCC
Q 012233 291 VPGE-PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP 369 (468)
Q Consensus 291 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 369 (468)
.... ......+++.|+|||.+.+...++.++|||||||++|+|++|++||...+..+.+.+++...+.+....+.....
T Consensus 154 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (294)
T PLN00009 154 GIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTS 233 (294)
T ss_pred CCCccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcccccc
Confidence 3322 223346788999999987655688999999999999999999999999888888888888877776655432111
Q ss_pred CCc-cCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCCC
Q 012233 370 NYT-EFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRD 428 (468)
Q Consensus 370 ~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~~ 428 (468)
... ...++.... .......+.+++++.++|.+||+.||.+||++.+++.||||++++.
T Consensus 234 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~~~~ 292 (294)
T PLN00009 234 LPDYKSAFPKWPP-KDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKDLGD 292 (294)
T ss_pred chhhhhhcccCCC-CCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCchHhHHhc
Confidence 000 000110000 0111123457899999999999999999999999999999998764
No 118
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=2.8e-43 Score=347.52 Aligned_cols=249 Identities=27% Similarity=0.437 Sum_probs=201.4
Q ss_pred eEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc-------chHHHHHHHHHHcC-CCCcccccceeeecCCCCceEE
Q 012233 139 YMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLN-HPNVVSLKHCFFSTTEKDELYL 210 (468)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-------~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~~~~~ 210 (468)
|...+.||+|+||.||+|.++.+|+.||||++.+.. .....|..+++.+. |++|+++++++ .+...+
T Consensus 2 f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~-----~~~~~~ 76 (323)
T cd05615 2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCF-----QTVDRL 76 (323)
T ss_pred ceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEE-----ecCCEE
Confidence 788899999999999999999999999999986432 12345788888886 56777888877 444468
Q ss_pred EEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCcccc
Q 012233 211 NLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (468)
Q Consensus 211 ~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~ 290 (468)
|+||||++++.+... ......+++..++.++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||+++..
T Consensus 77 ~lv~Ey~~~g~L~~~---i~~~~~l~~~~~~~i~~qi~~al~~lH~-~~ivHrDikp~Nill~~~~-~ikL~Dfg~~~~~ 151 (323)
T cd05615 77 YFVMEYVNGGDLMYH---IQQVGKFKEPQAVFYAAEISVGLFFLHR-RGIIYRDLKLDNVMLDSEG-HIKIADFGMCKEH 151 (323)
T ss_pred EEEEcCCCCCcHHHH---HHHcCCCCHHHHHHHHHHHHHHHHHHHH-CCeeccCCCHHHeEECCCC-CEEEecccccccc
Confidence 999999987644322 2224568999999999999999999998 8999999999999999888 7999999998754
Q ss_pred CCC-CCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCC
Q 012233 291 VPG-EPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP 369 (468)
Q Consensus 291 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 369 (468)
... .......||+.|+|||++.+. .++.++|||||||++|+|++|+.||.+.+....+..+...
T Consensus 152 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~-------------- 216 (323)
T cd05615 152 MVDGVTTRTFCGTPDYIAPEIIAYQ-PYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEH-------------- 216 (323)
T ss_pred CCCCccccCccCCccccCHHHHcCC-CCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC--------------
Confidence 322 223356789999999999755 4899999999999999999999999887766555555431
Q ss_pred CCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCC-----HHHHhCCCCCCCCC
Q 012233 370 NYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCT-----ALEACAHPFFDDLR 427 (468)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s-----~~ell~hp~f~~~~ 427 (468)
... ++..++.++.+||.+||+.||.+|++ ..+++.||||+.+.
T Consensus 217 ---~~~------------~p~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~~~ 264 (323)
T cd05615 217 ---NVS------------YPKSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRRID 264 (323)
T ss_pred ---CCC------------CCccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCCCC
Confidence 111 23457889999999999999999997 57899999999864
No 119
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=7.8e-43 Score=336.89 Aligned_cols=275 Identities=36% Similarity=0.644 Sum_probs=217.2
Q ss_pred eEEeceecccCceEEEEEEEcCCCCEEEEEEeecccc-----hHHHHHHHHHHcC-CCCcccccceeeecCCCCceEEEE
Q 012233 139 YMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKR-----YKNRELQIMRLLN-HPNVVSLKHCFFSTTEKDELYLNL 212 (468)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~~-----~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~~~~~~l 212 (468)
|.+.+.||+|+||.||+|.+..++..||+|.+..... ...+|+.+++++. |+||+++++++... ...++++
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~---~~~~~~l 77 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDR---KTGRLAL 77 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecC---CCCcEEE
Confidence 6788899999999999999999999999998864321 2235888888885 99999999988543 1145889
Q ss_pred EeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCC
Q 012233 213 VLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP 292 (468)
Q Consensus 213 v~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~ 292 (468)
||||+.+++++.+... ...+++..++.++.||+.||.|||+ .||+||||||+||+++. + .+||+|||++.....
T Consensus 78 v~e~~~~~l~~~l~~~---~~~~~~~~~~~~~~qi~~~L~~LH~-~~i~H~dl~p~ni~l~~-~-~~kl~dfg~~~~~~~ 151 (282)
T cd07831 78 VFELMDMNLYELIKGR---KRPLPEKRVKSYMYQLLKSLDHMHR-NGIFHRDIKPENILIKD-D-ILKLADFGSCRGIYS 151 (282)
T ss_pred EEecCCccHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHH-CCceecccCHHHEEEcC-C-CeEEEeccccccccc
Confidence 9999998887755432 3568999999999999999999998 89999999999999998 5 799999999987654
Q ss_pred CCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCC-C
Q 012233 293 GEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPN-Y 371 (468)
Q Consensus 293 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-~ 371 (468)
........++..|+|||++.....++.++|||||||++|||++|.+||.+.+..+.+..+...++.+........... .
T Consensus 152 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (282)
T cd07831 152 KPPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRH 231 (282)
T ss_pred CCCcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhccccc
Confidence 444445678899999998765555789999999999999999999999998888888888887777766443222111 1
Q ss_pred ccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCC
Q 012233 372 TEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (468)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f 423 (468)
..+.++....... ..+...++.++.+||.+||++||.+||++.+++.||||
T Consensus 232 ~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~~ 282 (282)
T cd07831 232 MNYNFPSKKGTGL-RKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPYF 282 (282)
T ss_pred ccccCcccccccH-HHHcccccHHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence 1222222111111 11234578999999999999999999999999999998
No 120
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=4.5e-44 Score=352.39 Aligned_cols=245 Identities=29% Similarity=0.471 Sum_probs=199.9
Q ss_pred ceecccCceEEEEEEE---cCCCCEEEEEEeeccc------chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEEE
Q 012233 143 RVVGTGSFGVVFQAKC---LETGDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLV 213 (468)
Q Consensus 143 ~~lG~G~fg~Vy~~~~---~~~g~~vaiK~~~~~~------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv 213 (468)
+.||+|+||.||++++ ..+|+.||+|++.... ....+|+++++.++||||+++++++ .+...+|+|
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-----~~~~~~~lv 76 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAF-----QTEGKLYLI 76 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEE-----EcCCEEEEE
Confidence 5799999999999986 3578999999986432 2234699999999999999999988 444568999
Q ss_pred eecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCCC
Q 012233 214 LEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPG 293 (468)
Q Consensus 214 ~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~~ 293 (468)
|||+.++.+... ......+++..++.++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||++......
T Consensus 77 ~e~~~~~~L~~~---l~~~~~l~~~~~~~~~~qi~~~l~~lH~-~~i~H~dlkp~Nil~~~~~-~~kL~Dfg~~~~~~~~ 151 (318)
T cd05582 77 LDFLRGGDLFTR---LSKEVMFTEEDVKFYLAELALALDHLHS-LGIIYRDLKPENILLDEEG-HIKLTDFGLSKESIDH 151 (318)
T ss_pred EcCCCCCcHHHH---HHHcCCCCHHHHHHHHHHHHHHHHHHHH-CCEecCCCCHHHeEECCCC-cEEEeeccCCcccCCC
Confidence 999986544322 1224568999999999999999999998 8999999999999999888 7999999998765433
Q ss_pred -CCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCCc
Q 012233 294 -EPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYT 372 (468)
Q Consensus 294 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 372 (468)
.......|++.|+|||++.+. .++.++|||||||++|+|++|+.||...+..+.+..+...
T Consensus 152 ~~~~~~~~g~~~y~aPE~~~~~-~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~----------------- 213 (318)
T cd05582 152 EKKAYSFCGTVEYMAPEVVNRR-GHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKA----------------- 213 (318)
T ss_pred CCceecccCChhhcCHHHHcCC-CCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcC-----------------
Confidence 233456789999999999654 4889999999999999999999999887766655554331
Q ss_pred cCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCC-----HHHHhCCCCCCCCC
Q 012233 373 EFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCT-----ALEACAHPFFDDLR 427 (468)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s-----~~ell~hp~f~~~~ 427 (468)
... ++..+++++.+||.+||+.||.+||+ +.+++.||||+.+.
T Consensus 214 ~~~------------~p~~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~~~ 261 (318)
T cd05582 214 KLG------------MPQFLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFSTID 261 (318)
T ss_pred CCC------------CCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCCCC
Confidence 111 23457899999999999999999999 77899999998763
No 121
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-44 Score=340.78 Aligned_cols=282 Identities=30% Similarity=0.553 Sum_probs=221.0
Q ss_pred ccceEEeceecccCceEEEEEEEcCCCCEEEEEEeecccchHH---HHHHHHHHcCC--C----CcccccceeeecCCCC
Q 012233 136 TISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRYKN---RELQIMRLLNH--P----NVVSLKHCFFSTTEKD 206 (468)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~~~~~---~E~~il~~l~h--p----nIv~l~~~~~~~~~~~ 206 (468)
..+|.+...+|+|.||.|..|.+..++..||||+++...++.+ -|+++|+++.+ | -+|++.++| .-
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wF-----dy 162 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWF-----DY 162 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhh-----hc
Confidence 3469999999999999999999999999999999876655443 49999999943 2 278888888 44
Q ss_pred ceEEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCC-----------
Q 012233 207 ELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPH----------- 275 (468)
Q Consensus 207 ~~~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~----------- 275 (468)
..++|||+|.++-++++.+... ....+++..++.+++|++.+++|||+ .+++|.||||||||+.+.
T Consensus 163 rghiCivfellG~S~~dFlk~N--~y~~fpi~~ir~m~~QL~~sv~fLh~-~kl~HTDLKPENILfvss~~~~~~~~k~~ 239 (415)
T KOG0671|consen 163 RGHICIVFELLGLSTFDFLKEN--NYIPFPIDHIRHMGYQLLESVAFLHD-LKLTHTDLKPENILFVSSEYFKTYNPKKK 239 (415)
T ss_pred cCceEEEEeccChhHHHHhccC--CccccchHHHHHHHHHHHHHHHHHHh-cceeecCCChheEEEeccceEEEeccCCc
Confidence 5569999999998888866542 24568999999999999999999998 899999999999997311
Q ss_pred --------CCcEEEeeecCccccCCCCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHH
Q 012233 276 --------THQLKICDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVD 347 (468)
Q Consensus 276 --------~~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~ 347 (468)
...|+|+|||.|+... ......+.|..|+|||++.+-+ ++..+||||+||||+||.+|...|+..++.+
T Consensus 240 ~~~~r~~ks~~I~vIDFGsAtf~~--e~hs~iVsTRHYRAPEViLgLG-wS~pCDvWSiGCIL~ElytG~~LFqtHen~E 316 (415)
T KOG0671|consen 240 VCFIRPLKSTAIKVIDFGSATFDH--EHHSTIVSTRHYRAPEVILGLG-WSQPCDVWSIGCILVELYTGETLFQTHENLE 316 (415)
T ss_pred cceeccCCCcceEEEecCCcceec--cCcceeeeccccCCchheeccC-cCCccCceeeeeEEEEeeccceecccCCcHH
Confidence 1158999999998653 3446788999999999999765 9999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCHHHHhhc-CCCCc---cCCCCcc-----------cCCCcccccc--cCCCHHHHHHHHHhcccCCCC
Q 012233 348 QLVEIIKILGTPTREEIKCM-NPNYT---EFKFPQI-----------KAHPWHKIFH--KRMPPEALDLVSRLLQYSPSL 410 (468)
Q Consensus 348 ~~~~i~~~~~~~~~~~~~~~-~~~~~---~~~~~~~-----------~~~~~~~~~~--~~~~~~l~~li~~~L~~dP~~ 410 (468)
.+..+..++|..+...+... ...|. .+.++.. .+.+...... ...-.++.|||++||.+||.+
T Consensus 317 HLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~ 396 (415)
T KOG0671|consen 317 HLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPAR 396 (415)
T ss_pred HHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccc
Confidence 99999999997776665543 11110 1111110 0111111110 111235899999999999999
Q ss_pred CCCHHHHhCCCCCCCCCC
Q 012233 411 RCTALEACAHPFFDDLRD 428 (468)
Q Consensus 411 R~s~~ell~hp~f~~~~~ 428 (468)
|+|+.|+|.||||+.+..
T Consensus 397 RiTl~EAL~HpFF~~~~~ 414 (415)
T KOG0671|consen 397 RITLREALSHPFFARLTP 414 (415)
T ss_pred cccHHHHhcCHHhhcCCC
Confidence 999999999999987653
No 122
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=3.9e-43 Score=340.35 Aligned_cols=255 Identities=27% Similarity=0.421 Sum_probs=202.7
Q ss_pred eEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc-------chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEE
Q 012233 139 YMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (468)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~ 211 (468)
|++.+.||+|+||.||+|.+..+++.||+|.+.... ....+|+.+++.++|+||+++++.+ .+..++|
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~-----~~~~~~~ 76 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAY-----ETKDALC 76 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEE-----ecCCEEE
Confidence 778899999999999999999999999999885431 2234699999999999999998887 3444689
Q ss_pred EEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccC
Q 012233 212 LVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (468)
Q Consensus 212 lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~ 291 (468)
+||||+.++.+...... .....+++..+..++.|++.||.|||+ .||+||||||+||+++.++ .++|+|||++....
T Consensus 77 lv~e~~~g~~L~~~l~~-~~~~~l~~~~~~~~~~qi~~~l~~lH~-~~iiH~dikp~Nil~~~~~-~~~l~Dfg~~~~~~ 153 (285)
T cd05630 77 LVLTLMNGGDLKFHIYH-MGEAGFEEGRAVFYAAEICCGLEDLHQ-ERIVYRDLKPENILLDDHG-HIRISDLGLAVHVP 153 (285)
T ss_pred EEEEecCCCcHHHHHHH-hcccCCCHHHHHHHHHHHHHHHHHHHh-CCEEeCCCCHHHEEECCCC-CEEEeeccceeecC
Confidence 99999987655433221 223468899999999999999999998 8999999999999999887 79999999997655
Q ss_pred CCCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCC
Q 012233 292 PGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNY 371 (468)
Q Consensus 292 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 371 (468)
.........|+..|+|||++.+.. ++.++|+|||||++|+|++|+.||...................
T Consensus 154 ~~~~~~~~~g~~~y~aPE~~~~~~-~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~------------ 220 (285)
T cd05630 154 EGQTIKGRVGTVGYMAPEVVKNER-YTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEV------------ 220 (285)
T ss_pred CCccccCCCCCccccChHHHcCCC-CCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhh------------
Confidence 444444567899999999997654 8999999999999999999999998654321111111100000
Q ss_pred ccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCC-----HHHHhCCCCCCCCC
Q 012233 372 TEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCT-----ALEACAHPFFDDLR 427 (468)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s-----~~ell~hp~f~~~~ 427 (468)
...++..+++++.+||.+||+.||.+|+| +.|+++||||+.+.
T Consensus 221 -------------~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~~~ 268 (285)
T cd05630 221 -------------QEEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQIN 268 (285)
T ss_pred -------------hhhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhhccC
Confidence 00123457889999999999999999999 99999999998753
No 123
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=1.1e-43 Score=350.80 Aligned_cols=245 Identities=28% Similarity=0.484 Sum_probs=196.7
Q ss_pred ceecccCceEEEEEEEcCCCCEEEEEEeeccc-------chHHHHH-HHHHHcCCCCcccccceeeecCCCCceEEEEEe
Q 012233 143 RVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNREL-QIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVL 214 (468)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-------~~~~~E~-~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv~ 214 (468)
+.||+|+||+||+|.+..+|+.||+|++.+.. .....|. .+++.++||||+++++++ .....+|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~-----~~~~~~~lv~ 75 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSF-----QTTEKLYFVL 75 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEE-----ecCCEEEEEE
Confidence 46999999999999999999999999986432 1122333 357789999999999888 4444689999
Q ss_pred ecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCC-C
Q 012233 215 EYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP-G 293 (468)
Q Consensus 215 e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~-~ 293 (468)
||+.++.+... ......+++..++.++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||+++.... .
T Consensus 76 e~~~~~~L~~~---l~~~~~~~~~~~~~~~~qi~~al~~lH~-~givH~Dlkp~NIll~~~~-~~kL~DfG~~~~~~~~~ 150 (325)
T cd05604 76 DFVNGGELFFH---LQRERSFPEPRARFYAAEIASALGYLHS-INIVYRDLKPENILLDSQG-HVVLTDFGLCKEGIAQS 150 (325)
T ss_pred cCCCCCCHHHH---HHHcCCCCHHHHHHHHHHHHHHHHHHHH-CCeeecCCCHHHeEECCCC-CEEEeecCCcccCCCCC
Confidence 99997655322 2234678999999999999999999998 8999999999999999888 799999999875422 2
Q ss_pred CCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCCcc
Q 012233 294 EPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTE 373 (468)
Q Consensus 294 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 373 (468)
......+||+.|+|||++.+.. ++.++|||||||++|+|++|..||...+..+.+..+... .
T Consensus 151 ~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~-----------------~ 212 (325)
T cd05604 151 DTTTTFCGTPEYLAPEVIRKQP-YDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHK-----------------P 212 (325)
T ss_pred CCcccccCChhhCCHHHHcCCC-CCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcC-----------------C
Confidence 2334567999999999997654 899999999999999999999999887766555544331 0
Q ss_pred CCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCH----HHHhCCCCCCCCC
Q 012233 374 FKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTA----LEACAHPFFDDLR 427 (468)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~----~ell~hp~f~~~~ 427 (468)
. .+.+.++..+.++|.+||+.||.+||++ .+++.||||+.+.
T Consensus 213 ~------------~~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~~~ 258 (325)
T cd05604 213 L------------VLRPGASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFESLS 258 (325)
T ss_pred c------------cCCCCCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcCCCC
Confidence 0 0223578899999999999999999976 5899999999753
No 124
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=3.3e-43 Score=348.37 Aligned_cols=256 Identities=25% Similarity=0.416 Sum_probs=204.3
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc-------chHHHHHHHHHHcCCCCcccccceeeecCCCCceEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYL 210 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~ 210 (468)
+|.+.+.||+|+||.||++.+..+++.||+|++.+.. ....+|+.++..++|+||+++++++ .+...+
T Consensus 2 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~~ 76 (332)
T cd05623 2 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAF-----QDENNL 76 (332)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEE-----ecCCEE
Confidence 5999999999999999999999999999999985421 2245688899999999999999888 445568
Q ss_pred EEEeecccchHH-HHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccc
Q 012233 211 NLVLEYISETVY-RVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (468)
Q Consensus 211 ~lv~e~~~~~ll-~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~ 289 (468)
|+||||+.++.+ ..+. .....+++..++.++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||++..
T Consensus 77 ~lv~ey~~~g~L~~~l~---~~~~~l~~~~~~~~~~qi~~al~~lH~-~~iiHrDlkp~Nili~~~~-~~kL~DfG~a~~ 151 (332)
T cd05623 77 YLVMDYYVGGDLLTLLS---KFEDRLPEDMARFYLAEMVIAIDSVHQ-LHYVHRDIKPDNILMDMNG-HIRLADFGSCLK 151 (332)
T ss_pred EEEEeccCCCcHHHHHH---HhcCCCCHHHHHHHHHHHHHHHHHHHH-CCeEecCCCHHHEEECCCC-CEEEeecchhee
Confidence 999999986544 3332 224568899999999999999999998 8999999999999999887 799999999876
Q ss_pred cCCCCC--CccccccCCccccccccC----CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHH
Q 012233 290 LVPGEP--NISYICSRYYRAPELIFG----ATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREE 363 (468)
Q Consensus 290 ~~~~~~--~~~~~gt~~y~aPE~~~~----~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~ 363 (468)
...... ....+||+.|+|||++.+ ...++.++|||||||++|||++|+.||...+..+.+..+....
T Consensus 152 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~------- 224 (332)
T cd05623 152 LMEDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHK------- 224 (332)
T ss_pred cccCCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCC-------
Confidence 533222 223578999999999852 3347899999999999999999999999887766666554310
Q ss_pred HhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCC--CCCHHHHhCCCCCCCCC
Q 012233 364 IKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSL--RCTALEACAHPFFDDLR 427 (468)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~--R~s~~ell~hp~f~~~~ 427 (468)
..+.+|. ....+++++++||.+||..++.+ |+++.++++||||..+.
T Consensus 225 --------~~~~~p~---------~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~f~~~~ 273 (332)
T cd05623 225 --------ERFQFPA---------QVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQHPFFTGID 273 (332)
T ss_pred --------ccccCCC---------ccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCCCCcCCCC
Confidence 1111111 12357899999999999765544 78999999999999864
No 125
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=7e-43 Score=346.30 Aligned_cols=302 Identities=36% Similarity=0.650 Sum_probs=234.1
Q ss_pred cceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc------chHHHHHHHHHHcCCCCcccccceeeecCCCCceEE
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYL 210 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~ 210 (468)
.+|.+.+.||.|+||.||+|.+..+|+.||+|++.... ....+|+.+|+.++||||++++++|.... .....+
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-~~~~~~ 83 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPG-ADFKDV 83 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccC-CCCceE
Confidence 36999999999999999999999999999999885432 22346999999999999999999875433 344568
Q ss_pred EEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCcccc
Q 012233 211 NLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (468)
Q Consensus 211 ~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~ 290 (468)
|+||||+.+++...+. ....+++..++.++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||++...
T Consensus 84 ~lv~e~~~~~l~~~~~----~~~~~~~~~~~~i~~qi~~aL~~LH~-~~ivH~dlkp~Nil~~~~~-~~kl~dfg~~~~~ 157 (334)
T cd07855 84 YVVMDLMESDLHHIIH----SDQPLTEEHIRYFLYQLLRGLKYIHS-ANVIHRDLKPSNLLVNEDC-ELRIGDFGMARGL 157 (334)
T ss_pred EEEEehhhhhHHHHhc----cCCCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEEcCCC-cEEecccccceee
Confidence 8999999887665433 24558999999999999999999998 8999999999999999888 7999999998765
Q ss_pred CCCCC-----CccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHh
Q 012233 291 VPGEP-----NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIK 365 (468)
Q Consensus 291 ~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 365 (468)
..... .....++..|+|||.+.+...++.++|||||||++|+|++|+.||.+.+....+..+....+.|+...+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~ 237 (334)
T cd07855 158 SSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLN 237 (334)
T ss_pred cccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhh
Confidence 32221 1235788999999998665568999999999999999999999999988888888888888888765543
Q ss_pred hcCCCCcc---CCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCCCCCCCCCCCCCCCcc
Q 012233 366 CMNPNYTE---FKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNTCLPNGRPLPTL 442 (468)
Q Consensus 366 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~~~~~~~~~~~~~~~~ 442 (468)
........ ..++.....+|.. +.+.+++++.++|++||+.||.+||++.+++.||||+....+..-.. ..-|-.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~~~~~~~~~--~~~~~~ 314 (334)
T cd07855 238 RIGSDRVRKYIQNLPRKQPVPWSK-IFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQYHDPDDEPT--CPPPFD 314 (334)
T ss_pred hhchhhHHHHHhhcccCCCCCHHH-HcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhhccCCccccc--CCCCCC
Confidence 22111100 0122222222322 23457899999999999999999999999999999998877666322 222333
Q ss_pred cccCHH
Q 012233 443 FNFTAQ 448 (468)
Q Consensus 443 ~~~~~~ 448 (468)
++|+.+
T Consensus 315 ~~~~~~ 320 (334)
T cd07855 315 FDFEAI 320 (334)
T ss_pred CChhhh
Confidence 555544
No 126
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=8.3e-44 Score=352.34 Aligned_cols=245 Identities=27% Similarity=0.466 Sum_probs=195.7
Q ss_pred ecccCceEEEEEEEcCCCCEEEEEEeecccc-------hHHHHHHHHHHc---CCCCcccccceeeecCCCCceEEEEEe
Q 012233 145 VGTGSFGVVFQAKCLETGDSVAIKKVLQDKR-------YKNRELQIMRLL---NHPNVVSLKHCFFSTTEKDELYLNLVL 214 (468)
Q Consensus 145 lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~~-------~~~~E~~il~~l---~hpnIv~l~~~~~~~~~~~~~~~~lv~ 214 (468)
||+|+||+||+|++..+|+.||||++.+... ....|..++..+ .||||++++++| .....+|+||
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~-----~~~~~~~lv~ 75 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSF-----QTDSDLYLVT 75 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEE-----ecCCeEEEEE
Confidence 7999999999999999999999999854321 112355666555 699999999988 4445689999
Q ss_pred ecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCC-C
Q 012233 215 EYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP-G 293 (468)
Q Consensus 215 e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~-~ 293 (468)
||+.++.+... ......+++..++.++.||+.||+|||+ +||+||||||+|||++.++ .+||+|||++..... .
T Consensus 76 e~~~~g~L~~~---l~~~~~~~~~~~~~~~~qil~al~~LH~-~~ivHrDlkp~Nili~~~~-~~kl~Dfg~a~~~~~~~ 150 (330)
T cd05586 76 DYMSGGELFWH---LQKEGRFSEDRAKFYIAELVLALEHLHK-YDIVYRDLKPENILLDATG-HIALCDFGLSKANLTDN 150 (330)
T ss_pred cCCCCChHHHH---HHhcCCCCHHHHHHHHHHHHHHHHHHHH-CCeEeccCCHHHeEECCCC-CEEEecCCcCcCCCCCC
Confidence 99987644322 1224668999999999999999999998 8999999999999999888 799999999875432 2
Q ss_pred CCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCCcc
Q 012233 294 EPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTE 373 (468)
Q Consensus 294 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 373 (468)
......+||+.|+|||++.+...++.++|||||||++|+|++|..||.+.+..+.+..+.. ..
T Consensus 151 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~-----------------~~ 213 (330)
T cd05586 151 KTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAF-----------------GK 213 (330)
T ss_pred CCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHc-----------------CC
Confidence 2334567999999999997665689999999999999999999999988765554444322 11
Q ss_pred CCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCC----CHHHHhCCCCCCCCC
Q 012233 374 FKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRC----TALEACAHPFFDDLR 427 (468)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~----s~~ell~hp~f~~~~ 427 (468)
..++ ...+++++.+||.+||..||.+|| ++.++++||||+++.
T Consensus 214 ~~~~-----------~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~~~ 260 (330)
T cd05586 214 VRFP-----------KNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFADID 260 (330)
T ss_pred CCCC-----------CccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccccCCC
Confidence 1111 123688999999999999999998 799999999998754
No 127
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=1.3e-42 Score=337.18 Aligned_cols=276 Identities=34% Similarity=0.641 Sum_probs=216.4
Q ss_pred cceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc-----chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEE
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~ 211 (468)
.+|.+.+.||.|+||.||+|.++.+++.||||.+.... ....+|+.+++.++|+||+++++++ .+..+.+
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~~~~ 79 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDII-----HTKKTLT 79 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEE-----ecCCeEE
Confidence 46999999999999999999999899999999885432 2345799999999999999999988 4445789
Q ss_pred EEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccC
Q 012233 212 LVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (468)
Q Consensus 212 lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~ 291 (468)
+||||+.+++...+.. ....+++..++.++.||+.||.|||+ .||+||||||+|||++.++ .+||+|||++....
T Consensus 80 lv~e~~~~~L~~~~~~---~~~~~~~~~~~~~~~ql~~al~~lH~-~~i~H~dl~p~nil~~~~~-~~kl~dfg~~~~~~ 154 (291)
T cd07844 80 LVFEYLDTDLKQYMDD---CGGGLSMHNVRLFLFQLLRGLAYCHQ-RRVLHRDLKPQNLLISERG-ELKLADFGLARAKS 154 (291)
T ss_pred EEEecCCCCHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHh-CCeecccCCHHHEEEcCCC-CEEECccccccccC
Confidence 9999999877665432 23468899999999999999999998 8999999999999999888 79999999986542
Q ss_pred CC-CCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCC-cHHHHHHHHHHhCCCCHHHHhhcCC
Q 012233 292 PG-EPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGES-GVDQLVEIIKILGTPTREEIKCMNP 369 (468)
Q Consensus 292 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~ 369 (468)
.. .......++..|+|||++.+...++.++|||||||++|+|++|+.||.... ..+.+..+.+..+.+....+.....
T Consensus 155 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (291)
T cd07844 155 VPSKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSS 234 (291)
T ss_pred CCCccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhh
Confidence 21 122234568899999998765668999999999999999999999998766 5566666777777777665543322
Q ss_pred C--CccCCCCcccCCCcccccccCCC--HHHHHHHHHhcccCCCCCCCHHHHhCCCCC
Q 012233 370 N--YTEFKFPQIKAHPWHKIFHKRMP--PEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (468)
Q Consensus 370 ~--~~~~~~~~~~~~~~~~~~~~~~~--~~l~~li~~~L~~dP~~R~s~~ell~hp~f 423 (468)
. +....++.......... ...++ .++.++|.+||+.||.+|||+.+++.||||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~f 291 (291)
T cd07844 235 NPEFKPYSFPFYPPRPLINH-APRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF 291 (291)
T ss_pred ccccccccccccCChhHHHh-CcCCCCchhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 1 22222222111111111 12344 889999999999999999999999999998
No 128
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=9.7e-43 Score=341.98 Aligned_cols=281 Identities=37% Similarity=0.634 Sum_probs=215.0
Q ss_pred ceEEeceecccCceEEEEEEEcC--CCCEEEEEEeeccc-------chHHHHHHHHHHcCCCCcccccceeeecCCCCce
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLE--TGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDEL 208 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~--~g~~vaiK~~~~~~-------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 208 (468)
+|.+.+.||+|+||.||+|.+.. ++..||||.+.... ....+|+.+++.++||||+++++++... ...
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---~~~ 77 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEH---ADK 77 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCC---CCc
Confidence 38899999999999999999988 89999999986632 2345799999999999999999988432 225
Q ss_pred EEEEEeecccchHHHHHhhhhhcC-CCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecC----CCCcEEEee
Q 012233 209 YLNLVLEYISETVYRVSKHYTRMN-QHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNP----HTHQLKICD 283 (468)
Q Consensus 209 ~~~lv~e~~~~~ll~~~~~~~~~~-~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~----~~~~vkL~D 283 (468)
.+++||||++++++..+....... ..+++..++.++.||+.||.|||+ .||+||||||+|||++. ++ .+||+|
T Consensus 78 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~i~h~dlkp~Nil~~~~~~~~~-~~kl~D 155 (316)
T cd07842 78 SVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHS-NWVLHRDLKPANILVMGEGPERG-VVKIGD 155 (316)
T ss_pred eEEEEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHh-CCEeeCCCCHHHEEEcCCCCccc-eEEECC
Confidence 689999999988887665443333 368899999999999999999998 89999999999999998 66 799999
Q ss_pred ecCccccCCCCC----CccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcH---------HHHH
Q 012233 284 FGSAKMLVPGEP----NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGV---------DQLV 350 (468)
Q Consensus 284 FG~a~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~---------~~~~ 350 (468)
||++........ .....++..|+|||++.+...++.++|||||||++|+|++|++||.+.... ..+.
T Consensus 156 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (316)
T cd07842 156 LGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLE 235 (316)
T ss_pred CccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHH
Confidence 999876533221 224567889999999877666899999999999999999999999865432 3456
Q ss_pred HHHHHhCCCCHHHHhhcC--CCCcc----CCCCcccCCCcccccc--cCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCC
Q 012233 351 EIIKILGTPTREEIKCMN--PNYTE----FKFPQIKAHPWHKIFH--KRMPPEALDLVSRLLQYSPSLRCTALEACAHPF 422 (468)
Q Consensus 351 ~i~~~~~~~~~~~~~~~~--~~~~~----~~~~~~~~~~~~~~~~--~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~ 422 (468)
.++..++.+....+.... +.+.. ..............+. ...+.++.++|.+||+.||.+|||+.|++.|||
T Consensus 236 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~ 315 (316)
T cd07842 236 RIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPY 315 (316)
T ss_pred HHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCC
Confidence 666666666554443211 11111 0000000001111111 257889999999999999999999999999999
Q ss_pred C
Q 012233 423 F 423 (468)
Q Consensus 423 f 423 (468)
|
T Consensus 316 f 316 (316)
T cd07842 316 F 316 (316)
T ss_pred C
Confidence 8
No 129
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=3.2e-43 Score=347.66 Aligned_cols=246 Identities=26% Similarity=0.493 Sum_probs=196.4
Q ss_pred ceecccCceEEEEEEEcCCCCEEEEEEeeccc-------chHHHHHHHHHHc-CCCCcccccceeeecCCCCceEEEEEe
Q 012233 143 RVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLL-NHPNVVSLKHCFFSTTEKDELYLNLVL 214 (468)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-------~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~~~~~~lv~ 214 (468)
+.||+|+||.||+|.+..+++.||+|++.+.. ....+|+.++..+ .||||+++++++ .+...+|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~-----~~~~~~~lv~ 75 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCF-----QTTSRLFLVI 75 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEE-----EeCCEEEEEE
Confidence 46999999999999999999999999986532 2234688888887 599999999988 4445689999
Q ss_pred ecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccC-CC
Q 012233 215 EYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV-PG 293 (468)
Q Consensus 215 e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~-~~ 293 (468)
||+.++.+.... .....+++..++.++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||+++... ..
T Consensus 76 e~~~~~~L~~~~---~~~~~l~~~~~~~~~~qi~~al~~lH~-~~ivHrDlkp~Nili~~~~-~~kl~Dfg~~~~~~~~~ 150 (327)
T cd05617 76 EYVNGGDLMFHM---QRQRKLPEEHARFYAAEICIALNFLHE-RGIIYRDLKLDNVLLDADG-HIKLTDYGMCKEGLGPG 150 (327)
T ss_pred eCCCCCcHHHHH---HHcCCCCHHHHHHHHHHHHHHHHHHHH-CCeeccCCCHHHEEEeCCC-CEEEeccccceeccCCC
Confidence 999876553221 224568999999999999999999998 8999999999999999888 79999999987532 23
Q ss_pred CCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCC------cHHHHHHHHHHhCCCCHHHHhhc
Q 012233 294 EPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGES------GVDQLVEIIKILGTPTREEIKCM 367 (468)
Q Consensus 294 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~------~~~~~~~i~~~~~~~~~~~~~~~ 367 (468)
......+||+.|+|||++.+. .++.++|||||||++|+|++|..||.... ..+.+.+++..
T Consensus 151 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~------------ 217 (327)
T cd05617 151 DTTSTFCGTPNYIAPEILRGE-EYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILE------------ 217 (327)
T ss_pred CceecccCCcccCCHHHHCCC-CCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHh------------
Confidence 334457899999999999765 48999999999999999999999996422 22222222211
Q ss_pred CCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCC------HHHHhCCCCCCCCC
Q 012233 368 NPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCT------ALEACAHPFFDDLR 427 (468)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s------~~ell~hp~f~~~~ 427 (468)
.... ++..++..+.++|.+||+.||.+|++ +.++++||||+.+.
T Consensus 218 ----~~~~------------~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~~ 267 (327)
T cd05617 218 ----KPIR------------IPRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSID 267 (327)
T ss_pred ----CCCC------------CCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCCCC
Confidence 0111 33457899999999999999999998 57999999999875
No 130
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=5.1e-43 Score=363.64 Aligned_cols=261 Identities=25% Similarity=0.346 Sum_probs=210.8
Q ss_pred cceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc------chHHHHHHHHHHcCCCCcccccceeeecCC---CCc
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTE---KDE 207 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~---~~~ 207 (468)
.+|.+.+.||+|+||+||+|.+..+|+.||||++.... ....+|+.++..++|+||++++..+..... ...
T Consensus 32 ~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~ 111 (496)
T PTZ00283 32 KKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPENV 111 (496)
T ss_pred CCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcccc
Confidence 36999999999999999999999999999999985432 234568999999999999999887644332 122
Q ss_pred eEEEEEeecccch-HHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecC
Q 012233 208 LYLNLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGS 286 (468)
Q Consensus 208 ~~~~lv~e~~~~~-ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~ 286 (468)
.++++||||+.++ +.+.+.........+++..++.++.|++.||.|||+ +||+||||||+|||++.++ .+||+|||+
T Consensus 112 ~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~-~~IiHrDLKP~NILl~~~~-~vkL~DFGl 189 (496)
T PTZ00283 112 LMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHS-KHMIHRDIKSANILLCSNG-LVKLGDFGF 189 (496)
T ss_pred eEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHh-CCEecCCCCHHHEEEeCCC-CEEEEeccc
Confidence 3578999999865 445444444445678999999999999999999998 8999999999999999888 799999999
Q ss_pred ccccCCC---CCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHH
Q 012233 287 AKMLVPG---EPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREE 363 (468)
Q Consensus 287 a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~ 363 (468)
++..... ......+||+.|+|||++.+.. ++.++|||||||++|||++|+.||.+.+..+.+..+.....
T Consensus 190 s~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~-~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~~~------ 262 (496)
T PTZ00283 190 SKMYAATVSDDVGRTFCGTPYYVAPEIWRRKP-YSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGRY------ 262 (496)
T ss_pred CeeccccccccccccccCCcceeCHHHhCCCC-CCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCC------
Confidence 9765332 1233567999999999997654 89999999999999999999999988766555544433100
Q ss_pred HhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCCC
Q 012233 364 IKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRD 428 (468)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~~ 428 (468)
..++..+++++.+||.+||+.||.+||++.++++|||++....
T Consensus 263 ----------------------~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~p~~~~~~~ 305 (496)
T PTZ00283 263 ----------------------DPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNMPICKLFIS 305 (496)
T ss_pred ----------------------CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhCHHHHHhhh
Confidence 0133457899999999999999999999999999999886533
No 131
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=2.3e-43 Score=348.42 Aligned_cols=244 Identities=27% Similarity=0.435 Sum_probs=196.3
Q ss_pred ceecccCceEEEEEEEcCCCCEEEEEEeecccc-------hHHHH-HHHHHHcCCCCcccccceeeecCCCCceEEEEEe
Q 012233 143 RVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKR-------YKNRE-LQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVL 214 (468)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~~-------~~~~E-~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv~ 214 (468)
+.||+|+||.||+|.+..+++.||+|++.+... ...+| ..+++.++||||+++++++ .....+|+||
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~-----~~~~~~~lv~ 75 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSF-----QTADKLYFVL 75 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEE-----EcCCeEEEEE
Confidence 369999999999999999999999999864321 11223 3456788999999999888 4445689999
Q ss_pred ecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCC-C
Q 012233 215 EYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP-G 293 (468)
Q Consensus 215 e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~-~ 293 (468)
||+.++.+.... .....+++..++.++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||+++.... .
T Consensus 76 e~~~~~~L~~~~---~~~~~~~~~~~~~~~~qi~~~L~~lH~-~giiHrDlkp~Nili~~~~-~~kl~DfG~a~~~~~~~ 150 (325)
T cd05602 76 DYINGGELFYHL---QRERCFLEPRARFYAAEIASALGYLHS-LNIVYRDLKPENILLDSQG-HIVLTDFGLCKENIEHN 150 (325)
T ss_pred eCCCCCcHHHHH---HhcCCCCHHHHHHHHHHHHHHHHHHHH-CCeEecCCCHHHeEECCCC-CEEEccCCCCcccccCC
Confidence 999976554222 224568888899999999999999998 8999999999999999888 799999999875422 2
Q ss_pred CCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCCcc
Q 012233 294 EPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTE 373 (468)
Q Consensus 294 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 373 (468)
......+||+.|+|||++.+. .++.++|||||||++|+|++|.+||.+.+..+.+..+... .
T Consensus 151 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~-----------------~ 212 (325)
T cd05602 151 GTTSTFCGTPEYLAPEVLHKQ-PYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNK-----------------P 212 (325)
T ss_pred CCcccccCCccccCHHHHcCC-CCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhC-----------------C
Confidence 233456799999999999765 4899999999999999999999999987766655554431 0
Q ss_pred CCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHH----HHhCCCCCCCC
Q 012233 374 FKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTAL----EACAHPFFDDL 426 (468)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~----ell~hp~f~~~ 426 (468)
. .+.+.+++.+.+||.+||+.||.+|+++. ++++|+||..+
T Consensus 213 ~------------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~~~~ 257 (325)
T cd05602 213 L------------QLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFFSPI 257 (325)
T ss_pred c------------CCCCCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCcccCCC
Confidence 0 02345789999999999999999999876 89999999765
No 132
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=4.2e-43 Score=338.63 Aligned_cols=251 Identities=24% Similarity=0.369 Sum_probs=197.1
Q ss_pred ecccCceEEEEEEEcCCCCEEEEEEeeccc-------chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEEEeecc
Q 012233 145 VGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVLEYI 217 (468)
Q Consensus 145 lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv~e~~ 217 (468)
||+|+||.||++.++.+|+.||+|.+.... .....|+++++.++||||+++++++ .+..++|+||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~-----~~~~~~~lv~e~~ 75 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAF-----ESKTHLCLVMSLM 75 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEE-----ecCCeEEEEEecC
Confidence 799999999999999999999999885321 2234589999999999999998888 4455689999999
Q ss_pred cchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCCCCCCc
Q 012233 218 SETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGEPNI 297 (468)
Q Consensus 218 ~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~~~~~~ 297 (468)
.++.+..... ......+++..+..++.||+.||.|||+ .||+||||||+|||++.++ .++|+|||++..........
T Consensus 76 ~g~~L~~~~~-~~~~~~~~~~~~~~~~~qi~~al~~lH~-~~ivH~dikp~Nili~~~~-~~~l~Dfg~~~~~~~~~~~~ 152 (277)
T cd05607 76 NGGDLKYHIY-NVGERGLEMERVIHYSAQITCGILHLHS-MDIVYRDMKPENVLLDDQG-NCRLSDLGLAVELKDGKTIT 152 (277)
T ss_pred CCCCHHHHHH-hccccCCCHHHHHHHHHHHHHHHHHHHH-CCEEEccCChHhEEEcCCC-CEEEeeceeeeecCCCceee
Confidence 8765543222 1223457888899999999999999998 8999999999999999887 79999999997765444444
Q ss_pred cccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCCccCCCC
Q 012233 298 SYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFP 377 (468)
Q Consensus 298 ~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (468)
...|++.|+|||++.+.. ++.++|||||||++|+|++|+.||...........+...... ....+
T Consensus 153 ~~~~~~~y~aPE~~~~~~-~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~-------------~~~~~- 217 (277)
T cd05607 153 QRAGTNGYMAPEILKEEP-YSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLE-------------DEVKF- 217 (277)
T ss_pred ccCCCCCccCHHHHccCC-CCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhc-------------ccccc-
Confidence 567899999999997665 899999999999999999999999765432222222111000 00000
Q ss_pred cccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCH----HHHhCCCCCCCCCC
Q 012233 378 QIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTA----LEACAHPFFDDLRD 428 (468)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~----~ell~hp~f~~~~~ 428 (468)
....+++++++||.+||+.||.+||++ ++++.||||+.+..
T Consensus 218 ----------~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~~~~ 262 (277)
T cd05607 218 ----------EHQNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKTINF 262 (277)
T ss_pred ----------ccccCCHHHHHHHHHHhccCHhhCCCCccchhhhhcChhhcCCCH
Confidence 113478899999999999999999999 67889999998644
No 133
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=9.2e-43 Score=374.00 Aligned_cols=265 Identities=28% Similarity=0.415 Sum_probs=210.6
Q ss_pred CcccceEEeceecccCceEEEEEEEcCCCCEEEEEEeecc------cchHHHHHHHHHHcCCCCcccccceeeecCCCCc
Q 012233 134 KQTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDE 207 (468)
Q Consensus 134 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~------~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 207 (468)
....+|.+.+.||.|+||+||+|.+..++..||+|++... ...+..|+.+|+.|+|||||+++++|... ..
T Consensus 10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de---~~ 86 (1021)
T PTZ00266 10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNK---AN 86 (1021)
T ss_pred cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEec---CC
Confidence 3445799999999999999999999999999999988532 22345799999999999999999988543 23
Q ss_pred eEEEEEeecccch-HHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhc------CCccccCCCCCCeeecCCC----
Q 012233 208 LYLNLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHV------VGVCHRDIKPQNLLVNPHT---- 276 (468)
Q Consensus 208 ~~~~lv~e~~~~~-ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~------~givHrDlkp~NILl~~~~---- 276 (468)
..+||||||+.++ |...+.........+++..++.|+.||+.||.|||+. .+||||||||+||||+.+.
T Consensus 87 ~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg 166 (1021)
T PTZ00266 87 QKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIG 166 (1021)
T ss_pred CEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccc
Confidence 4688999999864 5555544444456799999999999999999999972 2499999999999996421
Q ss_pred ------------CcEEEeeecCccccCCCCCCccccccCCccccccccCC-CCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 012233 277 ------------HQLKICDFGSAKMLVPGEPNISYICSRYYRAPELIFGA-TEYTTAIDMWSIGCVLAELLLGQPLFPGE 343 (468)
Q Consensus 277 ------------~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~~DvwSlG~il~ell~G~~pf~~~ 343 (468)
..+||+|||++..+.........+||+.|+|||++.+. ..++.++||||||||||+|++|..||...
T Consensus 167 ~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~ 246 (1021)
T PTZ00266 167 KITAQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKA 246 (1021)
T ss_pred cccccccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcC
Confidence 14899999999876444444456899999999998643 34789999999999999999999999877
Q ss_pred CcHHHHHHHHHHhCCCCHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCC
Q 012233 344 SGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (468)
Q Consensus 344 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f 423 (468)
.....+...+... + .++ ....+.++.+||.+||+.+|.+||++.|+|.||||
T Consensus 247 ~~~~qli~~lk~~--p---------------~lp-----------i~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~i 298 (1021)
T PTZ00266 247 NNFSQLISELKRG--P---------------DLP-----------IKGKSKELNILIKNLLNLSAKERPSALQCLGYQII 298 (1021)
T ss_pred CcHHHHHHHHhcC--C---------------CCC-----------cCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHH
Confidence 6665554443311 0 000 12367899999999999999999999999999999
Q ss_pred CCCCCC
Q 012233 424 DDLRDP 429 (468)
Q Consensus 424 ~~~~~~ 429 (468)
+.+..+
T Consensus 299 k~i~~p 304 (1021)
T PTZ00266 299 KNVGPP 304 (1021)
T ss_pred hhcCCC
Confidence 977554
No 134
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=8e-44 Score=349.78 Aligned_cols=243 Identities=26% Similarity=0.359 Sum_probs=201.5
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeecc---cchHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEEEe
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD---KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVL 214 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~---~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv~ 214 (468)
.+.+++.||+|.||.||.|.+.. ...||+|.++.. ...+.+|+++|++|+|+|||++++++.. ..-+||||
T Consensus 207 ~l~l~~~LG~G~FG~V~~g~~~~-~~~vavk~ik~~~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~-----~~piyIVt 280 (468)
T KOG0197|consen 207 ELKLIRELGSGQFGEVWLGKWNG-STKVAVKTIKEGSMSPEAFLREAQIMKKLRHEKLVKLYGVCTK-----QEPIYIVT 280 (468)
T ss_pred HHHHHHHhcCCccceEEEEEEcC-CCcccceEEeccccChhHHHHHHHHHHhCcccCeEEEEEEEec-----CCceEEEE
Confidence 46677899999999999999943 247999988653 3445689999999999999999999843 22489999
Q ss_pred ecccch-HHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCCC
Q 012233 215 EYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPG 293 (468)
Q Consensus 215 e~~~~~-ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~~ 293 (468)
||+..| |++.++. .....+.......|+.|||.|++||++ +++|||||-..||||+.+. .+||+|||+|+...++
T Consensus 281 E~m~~GsLl~yLr~--~~~~~l~~~~Ll~~a~qIaeGM~YLes-~~~IHRDLAARNiLV~~~~-~vKIsDFGLAr~~~d~ 356 (468)
T KOG0197|consen 281 EYMPKGSLLDYLRT--REGGLLNLPQLLDFAAQIAEGMAYLES-KNYIHRDLAARNILVDEDL-VVKISDFGLARLIGDD 356 (468)
T ss_pred EecccCcHHHHhhh--cCCCccchHHHHHHHHHHHHHHHHHHh-CCccchhhhhhheeeccCc-eEEEcccccccccCCC
Confidence 999954 6665544 346778889999999999999999998 8999999999999999887 8999999999955444
Q ss_pred CCCcc--ccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCC
Q 012233 294 EPNIS--YICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPN 370 (468)
Q Consensus 294 ~~~~~--~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 370 (468)
..... .-....|.|||.+... .++.++|||||||+||||+| |+.||.+.++.+.+..+.+....|.
T Consensus 357 ~Y~~~~~~kfPIkWtAPEa~~~~-~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~GyRlp~---------- 425 (468)
T KOG0197|consen 357 EYTASEGGKFPIKWTAPEALNYG-KFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGYRLPR---------- 425 (468)
T ss_pred ceeecCCCCCCceecCHHHHhhC-CcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccCcCCC----------
Confidence 33222 2336789999999654 59999999999999999997 9999999999999888877554442
Q ss_pred CccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 371 YTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
|..+|+++.+++..||..+|++|||++.+..
T Consensus 426 ------------------P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~ 456 (468)
T KOG0197|consen 426 ------------------PEGCPDEVYELMKSCWHEDPEDRPTFETLRE 456 (468)
T ss_pred ------------------CCCCCHHHHHHHHHHhhCCcccCCCHHHHHH
Confidence 3568999999999999999999999997653
No 135
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=4.2e-43 Score=347.44 Aligned_cols=257 Identities=25% Similarity=0.405 Sum_probs=204.2
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc-------chHHHHHHHHHHcCCCCcccccceeeecCCCCceEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYL 210 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~ 210 (468)
+|.+.+.||+|+||.||++++..+++.||+|++.+.. ....+|..++..+.|+||+++++++ .+..++
T Consensus 2 ~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~-----~~~~~~ 76 (331)
T cd05624 2 DFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAF-----QDENYL 76 (331)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEE-----EcCCEE
Confidence 5999999999999999999999999999999986421 2245688999999999999999988 455579
Q ss_pred EEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCcccc
Q 012233 211 NLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (468)
Q Consensus 211 ~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~ 290 (468)
|+||||+.++.+..... .....+++..++.++.||+.||+|||+ +||+||||||+|||++.++ .+||+|||++...
T Consensus 77 ~lv~Ey~~gg~L~~~l~--~~~~~l~~~~~~~~~~qi~~~L~~lH~-~~iiHrDlkp~Nill~~~~-~~kl~DfG~a~~~ 152 (331)
T cd05624 77 YLVMDYYVGGDLLTLLS--KFEDRLPEDMARFYIAEMVLAIHSIHQ-LHYVHRDIKPDNVLLDMNG-HIRLADFGSCLKM 152 (331)
T ss_pred EEEEeCCCCCcHHHHHH--HhcCCCCHHHHHHHHHHHHHHHHHHHH-CCeeeccCchHHEEEcCCC-CEEEEeccceeec
Confidence 99999998765443222 224568899999999999999999998 9999999999999999888 7999999999766
Q ss_pred CCCCC--CccccccCCccccccccCC----CCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHH
Q 012233 291 VPGEP--NISYICSRYYRAPELIFGA----TEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEI 364 (468)
Q Consensus 291 ~~~~~--~~~~~gt~~y~aPE~~~~~----~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 364 (468)
..... .....||+.|+|||++.+. ..++.++|||||||++|+|++|+.||...+..+.+..+....
T Consensus 153 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~-------- 224 (331)
T cd05624 153 NQDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHE-------- 224 (331)
T ss_pred cCCCceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCC--------
Confidence 43322 1235789999999998642 347889999999999999999999998877666555544310
Q ss_pred hhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCC--CCCHHHHhCCCCCCCCC
Q 012233 365 KCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSL--RCTALEACAHPFFDDLR 427 (468)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~--R~s~~ell~hp~f~~~~ 427 (468)
..+.+|. ....+++++++||.+||..++.+ |++++++++||||+.+.
T Consensus 225 -------~~~~~p~---------~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~f~~~~ 273 (331)
T cd05624 225 -------ERFQFPS---------HITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGID 273 (331)
T ss_pred -------CcccCCC---------ccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcCCCcCCCC
Confidence 0111111 11347899999999999976654 57999999999999864
No 136
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=1.6e-42 Score=335.27 Aligned_cols=276 Identities=34% Similarity=0.634 Sum_probs=221.4
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc-----chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNL 212 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~l 212 (468)
+|.+.+.||.|++|.||+|.+..+|..||||++.... ....+|+.+++.++|+||+++++++. +....++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-----~~~~~~l 75 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIH-----TENKLML 75 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEe-----eCCcEEE
Confidence 4899999999999999999999999999999885432 23457999999999999999999984 3345889
Q ss_pred EeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCC
Q 012233 213 VLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP 292 (468)
Q Consensus 213 v~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~ 292 (468)
||||+++++...+.... ....+++..+..++.||+.||.|||+ .||+|+||||+||+++.++ .++|+|||++.....
T Consensus 76 v~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~-~~i~h~dl~p~ni~~~~~~-~~~l~d~g~~~~~~~ 152 (284)
T cd07836 76 VFEYMDKDLKKYMDTHG-VRGALDPNTVKSFTYQLLKGIAFCHE-NRVLHRDLKPQNLLINKRG-ELKLADFGLARAFGI 152 (284)
T ss_pred EEecCCccHHHHHHhcC-CCCCcCHHHHHHHHHHHHHHHHHHHH-CCeeeCCCCHHHEEECCCC-cEEEeecchhhhhcC
Confidence 99999988777654322 13468999999999999999999998 8999999999999999887 799999999875532
Q ss_pred CC-CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCC
Q 012233 293 GE-PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNY 371 (468)
Q Consensus 293 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 371 (468)
.. ......++..|++||++.+...++.++|+|||||++|+|++|..||.+.+..+.+..+.+....|....+.... ..
T Consensus 153 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 231 (284)
T cd07836 153 PVNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGIS-QL 231 (284)
T ss_pred CccccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHh-cC
Confidence 21 22345678899999998766667899999999999999999999999999888888888888777776554333 11
Q ss_pred cc--CCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCC
Q 012233 372 TE--FKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (468)
Q Consensus 372 ~~--~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f 423 (468)
.. ..++....... ..+.+.++.+++++|.+||+.||.+||++.+++.||||
T Consensus 232 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f 284 (284)
T cd07836 232 PEYKPTFPRYPPQDL-QQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF 284 (284)
T ss_pred chhcccccCCChHHH-HHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 11 11221111111 12234568899999999999999999999999999998
No 137
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=2.5e-43 Score=347.52 Aligned_cols=246 Identities=28% Similarity=0.437 Sum_probs=195.7
Q ss_pred ceecccCceEEEEEEEcCCCCEEEEEEeecccc-------hHHHH-HHHHHHcCCCCcccccceeeecCCCCceEEEEEe
Q 012233 143 RVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKR-------YKNRE-LQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVL 214 (468)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~~-------~~~~E-~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv~ 214 (468)
++||+|+||.||+|++..+|+.||+|++.+... ...+| ..+++.++||||+++++++ .+...+|+||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~-----~~~~~~~lv~ 75 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSF-----QTAEKLYFVL 75 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEE-----EcCCEEEEEE
Confidence 369999999999999999999999999864321 11223 3467889999999999887 4445689999
Q ss_pred ecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccC-CC
Q 012233 215 EYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV-PG 293 (468)
Q Consensus 215 e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~-~~ 293 (468)
||++++.+.... .....+++..++.++.||+.||.|||+ +||+||||||+||||+.++ .+||+|||+++... ..
T Consensus 76 e~~~~~~L~~~l---~~~~~~~~~~~~~~~~qi~~~L~~lH~-~~ivH~Dlkp~NIll~~~~-~~kl~Dfg~~~~~~~~~ 150 (321)
T cd05603 76 DYVNGGELFFHL---QRERCFLEPRARFYAAEVASAIGYLHS-LNIIYRDLKPENILLDSQG-HVVLTDFGLCKEGVEPE 150 (321)
T ss_pred cCCCCCCHHHHH---HHcCCCCHHHHHHHHHHHHHHHHHHHH-CCeEeccCCHHHeEECCCC-CEEEccCCCCccCCCCC
Confidence 999976553221 224568889999999999999999998 8999999999999999888 79999999987532 22
Q ss_pred CCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCCcc
Q 012233 294 EPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTE 373 (468)
Q Consensus 294 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 373 (468)
......+||+.|+|||++.+. .++.++|||||||++|||++|..||.+.+....+..+... .
T Consensus 151 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~-----------------~ 212 (321)
T cd05603 151 ETTSTFCGTPEYLAPEVLRKE-PYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHK-----------------P 212 (321)
T ss_pred CccccccCCcccCCHHHhcCC-CCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcC-----------------C
Confidence 233456789999999999654 4899999999999999999999999887655544443320 1
Q ss_pred CCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCH----HHHhCCCCCCCCCC
Q 012233 374 FKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTA----LEACAHPFFDDLRD 428 (468)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~----~ell~hp~f~~~~~ 428 (468)
.. ++...+.++.++|.+||+.||.+|+++ .++++||||..+..
T Consensus 213 ~~------------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~~~~~~ 259 (321)
T cd05603 213 LQ------------LPGGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFSPINW 259 (321)
T ss_pred CC------------CCCCCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCCcCCCCH
Confidence 11 234568899999999999999999975 59999999987543
No 138
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=3.9e-43 Score=363.98 Aligned_cols=253 Identities=27% Similarity=0.342 Sum_probs=206.3
Q ss_pred ceEEeceecccCceEEEEEEEcCC-CCEEEEEEeeccc----chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLET-GDSVAIKKVLQDK----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNL 212 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~-g~~vaiK~~~~~~----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~l 212 (468)
.|.+.+.||+|+||.||+|....+ +..||+|.+.... ....+|+.+|+.++|||||+++++|. ....+||
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~-----~~~~~~l 142 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFK-----SDDKLLL 142 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEE-----ECCEEEE
Confidence 499999999999999999998777 7889999764322 23457999999999999999999883 3446899
Q ss_pred EeecccchHH-HHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccC
Q 012233 213 VLEYISETVY-RVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (468)
Q Consensus 213 v~e~~~~~ll-~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~ 291 (468)
||||+.++.+ ..+.........+++..+..++.||+.||.|||+ +||+||||||+||||+.++ .+||+|||+++...
T Consensus 143 v~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~-~~ivHrDlkp~NIll~~~~-~~kL~DFgla~~~~ 220 (478)
T PTZ00267 143 IMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHS-RKMMHRDLKSANIFLMPTG-IIKLGDFGFSKQYS 220 (478)
T ss_pred EEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHh-CCEEECCcCHHhEEECCCC-cEEEEeCcCceecC
Confidence 9999986544 3333333344568899999999999999999998 8999999999999999888 79999999998764
Q ss_pred CCC---CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcC
Q 012233 292 PGE---PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMN 368 (468)
Q Consensus 292 ~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 368 (468)
... .....+||+.|+|||++.+. .++.++|||||||++|+|++|+.||.+.+..+.+..+......
T Consensus 221 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~---------- 289 (478)
T PTZ00267 221 DSVSLDVASSFCGTPYYLAPELWERK-RYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKYD---------- 289 (478)
T ss_pred CccccccccccCCCccccCHhHhCCC-CCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC----------
Confidence 332 23356799999999998654 4899999999999999999999999887766555554431000
Q ss_pred CCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCC
Q 012233 369 PNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDL 426 (468)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~ 426 (468)
.++..++.++.+||.+||+.||.+||++.+++.|||++.+
T Consensus 290 ------------------~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~~~~~~~ 329 (478)
T PTZ00267 290 ------------------PFPCPVSSGMKALLDPLLSKNPALRPTTQQLLHTEFLKYV 329 (478)
T ss_pred ------------------CCCccCCHHHHHHHHHHhccChhhCcCHHHHHhCHHHHHH
Confidence 0223478899999999999999999999999999998754
No 139
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=1.2e-42 Score=336.84 Aligned_cols=256 Identities=27% Similarity=0.391 Sum_probs=207.0
Q ss_pred eEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc-------chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEE
Q 012233 139 YMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (468)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~ 211 (468)
|+..+.||+|+||+||+|.+..+++.||+|.+.... ....+|+.+++.++|+||+++++++ .....+|
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~-----~~~~~~~ 76 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAY-----ETKDALC 76 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEE-----ecCCEEE
Confidence 778899999999999999999999999999885431 2245699999999999999998887 3444689
Q ss_pred EEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccC
Q 012233 212 LVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (468)
Q Consensus 212 lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~ 291 (468)
+||||+.++.+...... .....+++..+..++.|++.||.|||+ .||+||||||+||+++.++ .++|+|||++....
T Consensus 77 lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~~ql~~~l~~lH~-~~iiH~dikp~Nili~~~~-~~kl~Dfg~~~~~~ 153 (285)
T cd05632 77 LVLTIMNGGDLKFHIYN-MGNPGFEEERALFYAAEILCGLEDLHR-ENTVYRDLKPENILLDDYG-HIRISDLGLAVKIP 153 (285)
T ss_pred EEEEeccCccHHHHHHH-hcCCCCCHHHHHHHHHHHHHHHHHHHh-CCeeecCCCHHHEEECCCC-CEEEecCCcceecC
Confidence 99999997755433221 223468999999999999999999998 8999999999999999887 79999999997654
Q ss_pred CCCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCC
Q 012233 292 PGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNY 371 (468)
Q Consensus 292 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 371 (468)
.........|+..|+|||++.+. .++.++|+|||||++|+|++|..||.+.........+........
T Consensus 154 ~~~~~~~~~g~~~~~aPE~~~~~-~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~----------- 221 (285)
T cd05632 154 EGESIRGRVGTVGYMAPEVLNNQ-RYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETE----------- 221 (285)
T ss_pred CCCcccCCCCCcCccChHHhcCC-CCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccc-----------
Confidence 44444456789999999999765 489999999999999999999999987665444333332111100
Q ss_pred ccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCC-----HHHHhCCCCCCCCCC
Q 012233 372 TEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCT-----ALEACAHPFFDDLRD 428 (468)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s-----~~ell~hp~f~~~~~ 428 (468)
..+...+++++.+||.+||+.||.+||+ +.+++.||||..+..
T Consensus 222 --------------~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~~ 269 (285)
T cd05632 222 --------------EVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNMNF 269 (285)
T ss_pred --------------cccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcChhhhcCCH
Confidence 0123457889999999999999999999 889999999998743
No 140
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-42 Score=332.55 Aligned_cols=290 Identities=26% Similarity=0.436 Sum_probs=234.1
Q ss_pred CcccceEEeceecccCceEEEEEEEcCCCCEEEEEEeecccchHH---HHHHHHHHcC-----C---CCcccccceeeec
Q 012233 134 KQTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRYKN---RELQIMRLLN-----H---PNVVSLKHCFFST 202 (468)
Q Consensus 134 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~~~~~---~E~~il~~l~-----h---pnIv~l~~~~~~~ 202 (468)
....+|.+.++||.|.|++||+|.+..+.+.||+|+.+....+.+ .|+++|++++ | .+||+|++.|--.
T Consensus 75 F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~Fkhs 154 (590)
T KOG1290|consen 75 FNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHS 154 (590)
T ss_pred ccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceec
Confidence 344579999999999999999999999999999999987766654 5999999885 2 4699999998554
Q ss_pred CCCCceEEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeec---------
Q 012233 203 TEKDELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVN--------- 273 (468)
Q Consensus 203 ~~~~~~~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~--------- 273 (468)
. ....++|||+|+++..||.++.... .+.+++..++.|++||+.||.|||+.+||||.||||+|||+.
T Consensus 155 G-pNG~HVCMVfEvLGdnLLklI~~s~--YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~~~e~~~~~~ 231 (590)
T KOG1290|consen 155 G-PNGQHVCMVFEVLGDNLLKLIKYSN--YRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLCSTEIDPAKD 231 (590)
T ss_pred C-CCCcEEEEEehhhhhHHHHHHHHhC--CCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeeeccccchhhh
Confidence 4 5667899999999999999887654 577999999999999999999999889999999999999973
Q ss_pred --------------------------------------------------------------------------------
Q 012233 274 -------------------------------------------------------------------------------- 273 (468)
Q Consensus 274 -------------------------------------------------------------------------------- 273 (468)
T Consensus 232 ~~~a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~~l~~~~~~~~~~~~~s~n~~~~~n~ 311 (590)
T KOG1290|consen 232 AREAGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEASLAGLEGIEEEPNQESYNNEPRING 311 (590)
T ss_pred hhhhccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhhhhcccccccccccccccccccCCCc
Confidence
Q ss_pred -------------------------CC---------------------------------------------------CC
Q 012233 274 -------------------------PH---------------------------------------------------TH 277 (468)
Q Consensus 274 -------------------------~~---------------------------------------------------~~ 277 (468)
.. ..
T Consensus 312 ~~~~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~s~~s~~~~~~n~~v~p~~~~~~~di 391 (590)
T KOG1290|consen 312 NESTVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLSSPSSPGTIASNPLVNPDIPLPECDI 391 (590)
T ss_pred cccchhhcccccccccccCCccccccCccccccccccccchhcccccccccccccCcCCccccccccccCCCCCCCccce
Confidence 00 00
Q ss_pred cEEEeeecCccccCCCCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCC------CcHHHHHH
Q 012233 278 QLKICDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGE------SGVDQLVE 351 (468)
Q Consensus 278 ~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~------~~~~~~~~ 351 (468)
+|||+|||.|.+. ....+..+.|..|+|||++.|.. |++.+||||++|++|||+||...|... ..++.++.
T Consensus 392 ~vKIaDlGNACW~--~khFT~DIQTRQYRapEVllGsg-Y~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDHiA~ 468 (590)
T KOG1290|consen 392 RVKIADLGNACWV--HKHFTEDIQTRQYRAPEVLLGSG-YSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDHIAL 468 (590)
T ss_pred eEEEeeccchhhh--hhhhchhhhhhhccCcceeecCC-CCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHHHHH
Confidence 3688888888765 23344567899999999999876 999999999999999999999999653 36688999
Q ss_pred HHHHhCCCCHHHHhhc-------CCCCccCCCCcccCCCccccc------ccCCCHHHHHHHHHhcccCCCCCCCHHHHh
Q 012233 352 IIKILGTPTREEIKCM-------NPNYTEFKFPQIKAHPWHKIF------HKRMPPEALDLVSRLLQYSPSLRCTALEAC 418 (468)
Q Consensus 352 i~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~------~~~~~~~l~~li~~~L~~dP~~R~s~~ell 418 (468)
|++.+|..++.....- +..-.--.+..++.+++.+++ +..-..++.+|+.-||+++|++|+||.++|
T Consensus 469 i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA~~cl 548 (590)
T KOG1290|consen 469 IMELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTAAQCL 548 (590)
T ss_pred HHHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccHHHHh
Confidence 9999998887654421 111122233455666655443 233345788999999999999999999999
Q ss_pred CCCCCCCCCCC
Q 012233 419 AHPFFDDLRDP 429 (468)
Q Consensus 419 ~hp~f~~~~~~ 429 (468)
+|||+..+..+
T Consensus 549 ~hPwLn~~~~~ 559 (590)
T KOG1290|consen 549 KHPWLNPVAGP 559 (590)
T ss_pred cCccccCCCCC
Confidence 99999988775
No 141
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-43 Score=317.68 Aligned_cols=259 Identities=25% Similarity=0.412 Sum_probs=207.6
Q ss_pred CCCcccceEEeceecccCceEEEEEEEcCCCCEEEEEEeecccchHH-----HHHHHHHHc-CCCCcccccceeeecCCC
Q 012233 132 QPKQTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRYKN-----RELQIMRLL-NHPNVVSLKHCFFSTTEK 205 (468)
Q Consensus 132 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~~~~~-----~E~~il~~l-~hpnIv~l~~~~~~~~~~ 205 (468)
........+.+..||.|+.|.||+++.+.+|...|||.+.......+ ..+.++.+. .+|+||+++++|....+
T Consensus 87 ~~~dindl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~d- 165 (391)
T KOG0983|consen 87 YQADINDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTD- 165 (391)
T ss_pred cccChHHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCch-
Confidence 33444556777889999999999999999999999999966533221 233333333 48999999999977655
Q ss_pred CceEEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeec
Q 012233 206 DELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFG 285 (468)
Q Consensus 206 ~~~~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG 285 (468)
++|.||.|..-.-.+++ +....+|+..+-++...++.||.||.+.+||||||+||+|||+|..| ++||||||
T Consensus 166 ----V~IcMelMs~C~ekLlk---rik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~G-niKlCDFG 237 (391)
T KOG0983|consen 166 ----VFICMELMSTCAEKLLK---RIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERG-NIKLCDFG 237 (391)
T ss_pred ----HHHHHHHHHHHHHHHHH---HhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCC-CEEeeccc
Confidence 77899998754333332 34577999999999999999999999878999999999999999988 89999999
Q ss_pred CccccCCCCCCccccccCCccccccccC--CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCc-HHHHHHHHHHhCCCCHH
Q 012233 286 SAKMLVPGEPNISYICSRYYRAPELIFG--ATEYTTAIDMWSIGCVLAELLLGQPLFPGESG-VDQLVEIIKILGTPTRE 362 (468)
Q Consensus 286 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~-~~~~~~i~~~~~~~~~~ 362 (468)
++-.+.+...+....|.+.|||||.+.- ...|+.++||||||+.++||.||+.||.+.+. .+.+.++.+. .|+
T Consensus 238 IsGrlvdSkAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~--ePP-- 313 (391)
T KOG0983|consen 238 ISGRLVDSKAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNE--EPP-- 313 (391)
T ss_pred ccceeecccccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhc--CCC--
Confidence 9999888888888899999999999853 34589999999999999999999999998654 4555555541 111
Q ss_pred HHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCC
Q 012233 363 EIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDD 425 (468)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~ 425 (468)
.++ .....|+++.+|+..||.+|+.+||.-.++|+|||+..
T Consensus 314 ---------------~L~-------~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~~ 354 (391)
T KOG0983|consen 314 ---------------LLP-------GHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPFIKR 354 (391)
T ss_pred ---------------CCC-------cccCcCHHHHHHHHHHhhcCcccCcchHHHhcCcceee
Confidence 100 12337899999999999999999999999999997654
No 142
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-44 Score=355.31 Aligned_cols=255 Identities=24% Similarity=0.377 Sum_probs=212.4
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc----chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLV 213 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv 213 (468)
.|.|+-.||.|+||+||+|..+.++-..|.|+|.... ....-|++||..+.||+||+|++.||..+ .++|+
T Consensus 33 ~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~en-----kLwil 107 (1187)
T KOG0579|consen 33 HWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFEN-----KLWIL 107 (1187)
T ss_pred HHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccC-----ceEEE
Confidence 4888899999999999999999888888889884332 22335999999999999999999996544 38999
Q ss_pred eecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCC-
Q 012233 214 LEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP- 292 (468)
Q Consensus 214 ~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~- 292 (468)
.|||+||-.+.+.. .....+.+.+++.+++|+|.||.|||+ ++|||||||..|||++.+| .|+|+|||.+.....
T Consensus 108 iEFC~GGAVDaiml--EL~r~LtE~QIqvvc~q~ldALn~LHs-~~iIHRDLKAGNiL~TldG-dirLADFGVSAKn~~t 183 (1187)
T KOG0579|consen 108 IEFCGGGAVDAIML--ELGRVLTEDQIQVVCYQVLDALNWLHS-QNIIHRDLKAGNILLTLDG-DIRLADFGVSAKNKST 183 (1187)
T ss_pred EeecCCchHhHHHH--HhccccchHHHHHHHHHHHHHHHHHhh-cchhhhhccccceEEEecC-cEeeecccccccchhH
Confidence 99999987765433 346789999999999999999999998 8999999999999999999 799999999865432
Q ss_pred CCCCccccccCCccccccccC----CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcC
Q 012233 293 GEPNISYICSRYYRAPELIFG----ATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMN 368 (468)
Q Consensus 293 ~~~~~~~~gt~~y~aPE~~~~----~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 368 (468)
.....+++|||+|||||++.. ...|++++||||||++|.||.-+.+|-...+++..+.+|.+. .|+.
T Consensus 184 ~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKS--ePPT------- 254 (1187)
T KOG0579|consen 184 RQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS--EPPT------- 254 (1187)
T ss_pred HhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhc--CCCc-------
Confidence 224457999999999999843 234999999999999999999999999988888888877652 1110
Q ss_pred CCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCC
Q 012233 369 PNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLR 427 (468)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~ 427 (468)
..-+...+..+.||+++||.+||..||++.++|.||||+.++
T Consensus 255 -----------------LlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~~~ 296 (1187)
T KOG0579|consen 255 -----------------LLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQNAP 296 (1187)
T ss_pred -----------------ccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhCcccccCC
Confidence 012234577899999999999999999999999999998754
No 143
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=8.1e-43 Score=345.64 Aligned_cols=279 Identities=25% Similarity=0.394 Sum_probs=203.0
Q ss_pred cceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc-----chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEE
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~ 211 (468)
++|.+.+.||.|+||.||+|.+..++..+|+|.+.... ..+.+|+++++.++||||++++++|.. ..++|
T Consensus 5 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~~~ 79 (333)
T cd06650 5 DDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS-----DGEIS 79 (333)
T ss_pred hhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEE-----CCEEE
Confidence 46999999999999999999999999999999875432 235579999999999999999999843 34689
Q ss_pred EEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccC
Q 012233 212 LVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (468)
Q Consensus 212 lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~ 291 (468)
+||||+.++.+.... .....+++..+..++.|++.||.|||+..+|+|+||||+|||++.++ .+||+|||++....
T Consensus 80 lv~e~~~~~~L~~~l---~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~-~~kL~Dfg~~~~~~ 155 (333)
T cd06650 80 ICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG-EIKLCDFGVSGQLI 155 (333)
T ss_pred EEEecCCCCcHHHHH---HHcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCC-CEEEeeCCcchhhh
Confidence 999999875444222 22456888999999999999999999634799999999999999887 79999999987553
Q ss_pred CCCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHH--hCCCCHHHHhh-cC
Q 012233 292 PGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKI--LGTPTREEIKC-MN 368 (468)
Q Consensus 292 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~-~~ 368 (468)
.. ......|+..|+|||++.+. .++.++|||||||++|+|++|+.||......+.. .++.. .+.+....... ..
T Consensus 156 ~~-~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 232 (333)
T cd06650 156 DS-MANSFVGTRSYMSPERLQGT-HYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELE-LMFGCPVEGDPAESETSPRPR 232 (333)
T ss_pred hh-ccccCCCCccccCHHHhcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHH-HHhcCcccCCccccccCcccC
Confidence 22 22345789999999999764 4899999999999999999999999876543322 11110 00000000000 00
Q ss_pred ------CCCccCCCCc---------ccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCC
Q 012233 369 ------PNYTEFKFPQ---------IKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLR 427 (468)
Q Consensus 369 ------~~~~~~~~~~---------~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~ 427 (468)
..+.....+. +....-.......++.++++||.+||++||.+|||+.|++.||||+...
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~ 306 (333)
T cd06650 233 PPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSE 306 (333)
T ss_pred CccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhcCc
Confidence 0000000000 0000000000123678899999999999999999999999999998754
No 144
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=2.2e-42 Score=334.62 Aligned_cols=276 Identities=36% Similarity=0.654 Sum_probs=217.1
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc------chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~ 211 (468)
+|.+.+.||+|+||.||+|.+..+++.||+|.+.... ....+|+++++.++||||+++++++ .+..+.|
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~ 76 (286)
T cd07846 2 KYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVF-----RRKKRLY 76 (286)
T ss_pred ceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhc-----ccCCeEE
Confidence 5999999999999999999999899999999875422 2345799999999999999999998 4555789
Q ss_pred EEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccC
Q 012233 212 LVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (468)
Q Consensus 212 lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~ 291 (468)
+||||+.++.+..... ....+++..+..++.||+.||.|||+ .||+|+||+|+||+++.++ .++|+|||++....
T Consensus 77 lv~e~~~~~~l~~~~~---~~~~~~~~~~~~~~~~i~~~l~~LH~-~~i~h~~l~p~ni~~~~~~-~~~l~dfg~~~~~~ 151 (286)
T cd07846 77 LVFEFVDHTVLDDLEK---YPNGLDESRVRKYLFQILRGIEFCHS-HNIIHRDIKPENILVSQSG-VVKLCDFGFARTLA 151 (286)
T ss_pred EEEecCCccHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCCHHHEEECCCC-cEEEEeeeeeeecc
Confidence 9999999887764332 23458899999999999999999998 8999999999999999888 79999999987654
Q ss_pred CCC-CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhc--C
Q 012233 292 PGE-PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCM--N 368 (468)
Q Consensus 292 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~--~ 368 (468)
... ......++..|+|||++.+...++.++|||||||++|+|++|.+||...+..+....+....+.......... .
T Consensus 152 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (286)
T cd07846 152 APGEVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKN 231 (286)
T ss_pred CCccccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccc
Confidence 332 2234567899999999876666789999999999999999999999988877777777766655433221111 1
Q ss_pred CCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCC
Q 012233 369 PNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (468)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f 423 (468)
+......++......-.....+.++..+.+||.+||+.||.+||++.+++.||||
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 286 (286)
T cd07846 232 PLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF 286 (286)
T ss_pred hHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence 1111122222211111112245688999999999999999999999999999998
No 145
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=2.5e-42 Score=341.57 Aligned_cols=288 Identities=39% Similarity=0.685 Sum_probs=229.5
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc------chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~ 211 (468)
+|.+.+.||.|+||.||+|.+..+|+.||||++.... ....+|+.+++.++|+||+++++++..........+|
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 4899999999999999999998899999999885432 3455799999999999999999988554422334689
Q ss_pred EEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccC
Q 012233 212 LVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (468)
Q Consensus 212 lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~ 291 (468)
+||||+++++...+.. ...+++..++.++.||+.||+|||+ .||+|+||||+|||++.++ .++|+|||++....
T Consensus 81 lv~e~~~~~l~~~l~~----~~~l~~~~~~~i~~~l~~~l~~LH~-~gi~H~dlkp~nili~~~~-~~~L~dfg~~~~~~ 154 (330)
T cd07834 81 IVTELMETDLHKVIKS----PQPLTDDHIQYFLYQILRGLKYLHS-ANVIHRDLKPSNILVNSNC-DLKICDFGLARGVD 154 (330)
T ss_pred EEecchhhhHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEEcCCC-CEEEcccCceEeec
Confidence 9999999876654432 3478999999999999999999998 8999999999999999887 79999999998765
Q ss_pred CCC----CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhc
Q 012233 292 PGE----PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCM 367 (468)
Q Consensus 292 ~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 367 (468)
... ......+++.|+|||.+.+...++.++|+|||||++|+|++|++||.+.+..+.+..+....+.+....+...
T Consensus 155 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 234 (330)
T cd07834 155 PDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFI 234 (330)
T ss_pred ccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhc
Confidence 443 2334567899999999977646899999999999999999999999999988888889888888876654421
Q ss_pred CCCC-ccC--CCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCCCCCCC
Q 012233 368 NPNY-TEF--KFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNTC 432 (468)
Q Consensus 368 ~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~~~~~~ 432 (468)
.... ..+ ..+......+.. +...++.++.+||.+||++||.+||++.+++.||||+.+.++...
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~~~~ 301 (330)
T cd07834 235 TSEKARNYLKSLPKKPKKPLSK-LFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHDPEDE 301 (330)
T ss_pred cccchhhHHhhcccCCcchhHH-hcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhcccccC
Confidence 1111 000 001111111222 234578999999999999999999999999999999998775444
No 146
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=6.3e-42 Score=332.58 Aligned_cols=276 Identities=33% Similarity=0.588 Sum_probs=211.5
Q ss_pred cceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc-----chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEE
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~ 211 (468)
.+|.+.+.||+|+||.||+|.+..+|..||+|.+.... ....+|+.+++.++|+||+++++++ .+..+.|
T Consensus 5 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~-----~~~~~~~ 79 (291)
T cd07870 5 TSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDII-----HTKETLT 79 (291)
T ss_pred ceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEE-----ecCCeEE
Confidence 46999999999999999999999999999999885432 2345799999999999999999988 3444688
Q ss_pred EEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccC
Q 012233 212 LVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (468)
Q Consensus 212 lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~ 291 (468)
+||||+.++++..+.. ....+++..++.++.||+.||.|||+ .||+|+||||+|||++.++ .++|+|||+++...
T Consensus 80 lv~e~~~~~l~~~~~~---~~~~~~~~~~~~~~~qi~~~L~~lH~-~~i~H~dlkp~Nil~~~~~-~~~l~Dfg~~~~~~ 154 (291)
T cd07870 80 FVFEYMHTDLAQYMIQ---HPGGLHPYNVRLFMFQLLRGLAYIHG-QHILHRDLKPQNLLISYLG-ELKLADFGLARAKS 154 (291)
T ss_pred EEEecccCCHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCChHHEEEcCCC-cEEEeccccccccC
Confidence 9999999887765432 23457788889999999999999998 8999999999999999887 79999999987542
Q ss_pred CC-CCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCc-HHHHHHHHHHhCCCCHHHHhhcC-
Q 012233 292 PG-EPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESG-VDQLVEIIKILGTPTREEIKCMN- 368 (468)
Q Consensus 292 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~~- 368 (468)
.. .......+++.|+|||.+.+...++.++|||||||++|+|++|..||..... .+.+.++....+.|.........
T Consensus 155 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (291)
T cd07870 155 IPSQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSK 234 (291)
T ss_pred CCCCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhh
Confidence 22 1223456789999999987655688999999999999999999999987553 35556666666666554332211
Q ss_pred -CCCccCCCCcccCCCccccccc--CCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCC
Q 012233 369 -PNYTEFKFPQIKAHPWHKIFHK--RMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (468)
Q Consensus 369 -~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f 423 (468)
+.+....++....... ...+. ..+.++.++|.+||..||.+|||+.|++.||||
T Consensus 235 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~~ 291 (291)
T cd07870 235 LPNYKPEWFLPCKPQQL-RVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPYF 291 (291)
T ss_pred cccccchhccccCCcch-hhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence 1222211111111110 01111 236789999999999999999999999999998
No 147
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=7.2e-43 Score=332.74 Aligned_cols=252 Identities=35% Similarity=0.562 Sum_probs=202.9
Q ss_pred eEEeceecccCceEEEEEEEcCCCCEEEEEEeecccchH------HHHHHHHHHcCCCCcccccceeeecCCCCceEEEE
Q 012233 139 YMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRYK------NRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNL 212 (468)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~~~~------~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~l 212 (468)
|++.+.||+|+||+||++.+..+++.||+|++....... .+|+.+++.++||||+++++++.. ...+++
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~-----~~~~~~ 75 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQD-----DNYLYI 75 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEE-----SSEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccc-----cccccc
Confidence 889999999999999999999999999999996653222 248999999999999999999844 446889
Q ss_pred Eeecccc-hHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCcccc-
Q 012233 213 VLEYISE-TVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKML- 290 (468)
Q Consensus 213 v~e~~~~-~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~- 290 (468)
||||+.+ .+...+. ....+++..+..++.||+.||.+||+ .||+|+||||+|||++.++ .++|+|||.+...
T Consensus 76 v~~~~~~~~L~~~l~----~~~~~~~~~~~~~~~qi~~~L~~Lh~-~~i~H~dikp~NIl~~~~~-~~~l~Dfg~~~~~~ 149 (260)
T PF00069_consen 76 VMEYCPGGSLQDYLQ----KNKPLSEEEILKIAYQILEALAYLHS-KGIVHRDIKPENILLDENG-EVKLIDFGSSVKLS 149 (260)
T ss_dssp EEEEETTEBHHHHHH----HHSSBBHHHHHHHHHHHHHHHHHHHH-TTEEESSBSGGGEEESTTS-EEEESSGTTTEEST
T ss_pred ccccccccccccccc----cccccccccccccccccccccccccc-ccccccccccccccccccc-cccccccccccccc
Confidence 9999998 5555444 34678999999999999999999998 8999999999999999877 7999999999763
Q ss_pred CCCCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCC
Q 012233 291 VPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPN 370 (468)
Q Consensus 291 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 370 (468)
..........++..|+|||++.....++.++|+||||+++|+|++|..||......+....+.+...........
T Consensus 150 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~----- 224 (260)
T PF00069_consen 150 ENNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQ----- 224 (260)
T ss_dssp STTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTT-----
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhccccccccccc-----
Confidence 223344457789999999998634558999999999999999999999999874444444433322211111000
Q ss_pred CccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCC
Q 012233 371 YTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (468)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f 423 (468)
.....+..+.++|.+||+.||.+||++.++++||||
T Consensus 225 -----------------~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~~~~ 260 (260)
T PF00069_consen 225 -----------------QSREKSEELRDLIKKMLSKDPEQRPSAEELLKHPWF 260 (260)
T ss_dssp -----------------SHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred -----------------ccchhHHHHHHHHHHHccCChhHCcCHHHHhcCCCC
Confidence 001123789999999999999999999999999998
No 148
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=5.5e-42 Score=339.60 Aligned_cols=314 Identities=35% Similarity=0.591 Sum_probs=240.5
Q ss_pred ceEEeceecccCceEEEEEEEcCC--CCEEEEEEeecc------cchHHHHHHHHHHc-CCCCcccccceeeecCCCCce
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLET--GDSVAIKKVLQD------KRYKNRELQIMRLL-NHPNVVSLKHCFFSTTEKDEL 208 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~--g~~vaiK~~~~~------~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~~~ 208 (468)
+|.+.+.||+|+||.||++.+..+ +..||+|.+... .....+|+.+++.+ .||||+++++.+.... ....
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~-~~~~ 79 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFP-GNFN 79 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeecc-ccCC
Confidence 488999999999999999999887 899999987542 12345699999999 5999999988754332 2234
Q ss_pred EEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCcc
Q 012233 209 YLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAK 288 (468)
Q Consensus 209 ~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~ 288 (468)
.+|+++||+++++...+. ....+++..++.++.||+.||.|||+ .||+||||||+|||++.++ .+||+|||++.
T Consensus 80 ~~~~~~e~~~~~L~~~l~----~~~~~~~~~~~~~~~qi~~aL~~LH~-~givH~dlkp~Nili~~~~-~~kl~Dfg~a~ 153 (332)
T cd07857 80 ELYLYEELMEADLHQIIR----SGQPLTDAHFQSFIYQILCGLKYIHS-ANVLHRDLKPGNLLVNADC-ELKICDFGLAR 153 (332)
T ss_pred cEEEEEecccCCHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCHHHeEEcCCC-CEEeCcCCCce
Confidence 578999999987766543 24668999999999999999999998 8999999999999999887 79999999997
Q ss_pred ccCCCC-----CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHH
Q 012233 289 MLVPGE-----PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREE 363 (468)
Q Consensus 289 ~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~ 363 (468)
...... ......|++.|+|||.+.+...++.++|+|||||++|+|++|.+||...+....+..++..++.+....
T Consensus 154 ~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 233 (332)
T cd07857 154 GFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEET 233 (332)
T ss_pred ecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence 654322 122357899999999886655689999999999999999999999999888888899999888887665
Q ss_pred HhhcCCCCcc---CCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCCCCCCCCCCCCCCC
Q 012233 364 IKCMNPNYTE---FKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNTCLPNGRPLP 440 (468)
Q Consensus 364 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~~~~~~~~~~~~~~ 440 (468)
+..+...... ..+.......+. ...+.++..+.+||.+||+.||.+|||+.+++.||||+.++++....- -..|
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~~~~~~~~~~--~~~~ 310 (332)
T cd07857 234 LSRIGSPKAQNYIRSLPNIPKKPFE-SIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLAIWHDPDDEPV--CQKP 310 (332)
T ss_pred HHhhhhhhHHHHHHhccccCCcchH-hhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhhhhcCcccccc--cccc
Confidence 4432211000 000011111111 123446889999999999999999999999999999999887655433 2556
Q ss_pred cccccCHHHHhcCCHHHHHhcccc
Q 012233 441 TLFNFTAQELAGASNELRQRLIPE 464 (468)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~~~~~ 464 (468)
.-++|+.++ .-+|++.+|+.+
T Consensus 311 ~~~~~~~~~---~~~~~~~~~~~~ 331 (332)
T cd07857 311 FDFSFESED---SMEELRDMIIEE 331 (332)
T ss_pred ccCCccccc---cHHHHHHHHhhc
Confidence 667777433 346778887754
No 149
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=2.9e-42 Score=329.49 Aligned_cols=248 Identities=26% Similarity=0.449 Sum_probs=201.7
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc---------chHHHHHHHHHHcCCCCcccccceeeecCCCCce
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK---------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDEL 208 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~---------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 208 (468)
+|.+.+.||+|+||.||.|.+..++..||+|.+.... ....+|+.+++.++||||+++++++ .+..
T Consensus 3 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~ 77 (263)
T cd06625 3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCL-----RDDE 77 (263)
T ss_pred cccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEE-----ccCC
Confidence 5899999999999999999999999999999875321 2345799999999999999999988 4444
Q ss_pred EEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCcc
Q 012233 209 YLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAK 288 (468)
Q Consensus 209 ~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~ 288 (468)
.+++||||++++.+.... .....++...+..++.|++.||.|||+ .||+|+||||+||+++.++ .++|+|||+++
T Consensus 78 ~~~~v~e~~~~~~l~~~~---~~~~~~~~~~~~~~~~~l~~~l~~lH~-~~i~H~dl~p~nilv~~~~-~~~l~dfg~~~ 152 (263)
T cd06625 78 TLSIFMEYMPGGSVKDQL---KAYGALTETVTRKYTRQILEGVEYLHS-NMIVHRDIKGANILRDSAG-NVKLGDFGASK 152 (263)
T ss_pred eEEEEEEECCCCcHHHHH---HHhCCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEEcCCC-CEEEeecccce
Confidence 799999999876443221 123568888999999999999999998 8999999999999999887 79999999987
Q ss_pred ccCCCCCC----ccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHH
Q 012233 289 MLVPGEPN----ISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEI 364 (468)
Q Consensus 289 ~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 364 (468)
........ ....++..|+|||++.+.. ++.++|||||||++|+|++|+.||...+.......+....
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~-------- 223 (263)
T cd06625 153 RLQTICSSGTGMKSVTGTPYWMSPEVISGEG-YGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQP-------- 223 (263)
T ss_pred eccccccccccccCCCcCccccCcceeccCC-CCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhccC--------
Confidence 65332211 2356788999999997654 8999999999999999999999998766555444332210
Q ss_pred hhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCC
Q 012233 365 KCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (468)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f 423 (468)
....++..++.++.+||.+||..+|.+|||+.+++.||||
T Consensus 224 -------------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 263 (263)
T cd06625 224 -------------------TNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRHFFV 263 (263)
T ss_pred -------------------CCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhCCCC
Confidence 0011344578999999999999999999999999999998
No 150
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=5.5e-42 Score=337.07 Aligned_cols=267 Identities=28% Similarity=0.463 Sum_probs=213.4
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc-------chHHHHHHHHHHcCCCCcccccceeeecCCCCceEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYL 210 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~ 210 (468)
+|.+.+.||+|+||.||+|.+..+++.||||.+.... ....+|+++++.++|+||+++++.+ .+..+.
T Consensus 2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~ 76 (316)
T cd05574 2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASF-----QTETYL 76 (316)
T ss_pred ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeee-----ecCCEE
Confidence 5999999999999999999999999999999886532 2345699999999999999999988 445578
Q ss_pred EEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCcccc
Q 012233 211 NLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (468)
Q Consensus 211 ~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~ 290 (468)
|+||||+.++.+..... ......+++..++.++.||+.||.|||+ .|++|+||||+|||++.++ .++|+|||++...
T Consensus 77 ~lv~e~~~~~~L~~~~~-~~~~~~l~~~~~~~~~~qi~~~l~~lH~-~~i~H~dlkp~Nili~~~~-~~~l~dfg~~~~~ 153 (316)
T cd05574 77 CLVMDYCPGGELFRLLQ-RQPGKCLSEEVARFYAAEVLLALEYLHL-LGIVYRDLKPENILLHESG-HIMLSDFDLSKQS 153 (316)
T ss_pred EEEEEecCCCCHHHHHH-hCCCCccCHHHHHHHHHHHHHHHHHHHH-CCeeccCCChHHeEEcCCC-CEEEeecchhhcc
Confidence 99999998754443322 1223568999999999999999999998 8999999999999999887 7999999998654
Q ss_pred CCCCC------------------------------CccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCC
Q 012233 291 VPGEP------------------------------NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLF 340 (468)
Q Consensus 291 ~~~~~------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf 340 (468)
..... .....|+..|+|||++.+.. ++.++|||||||++|+|++|..||
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~-~~~~~Di~slG~ll~~l~~g~~pf 232 (316)
T cd05574 154 DVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDG-HGSAVDWWTLGILLYEMLYGTTPF 232 (316)
T ss_pred cccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCC-CCchHHHHHHHHHHHHHhhCCCCC
Confidence 22111 11346788999999997654 899999999999999999999999
Q ss_pred CCCCcHHHHHHHHHHhCCCCHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCC----HHH
Q 012233 341 PGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCT----ALE 416 (468)
Q Consensus 341 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s----~~e 416 (468)
.+.+....+.++... ...++. ...+++++.++|.+||..||.+||+ +++
T Consensus 233 ~~~~~~~~~~~~~~~-----------------~~~~~~----------~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ 285 (316)
T cd05574 233 KGSNRDETFSNILKK-----------------EVTFPG----------SPPVSSSARDLIRKLLVKDPSKRLGSKRGAAE 285 (316)
T ss_pred CCCchHHHHHHHhcC-----------------CccCCC----------ccccCHHHHHHHHHHccCCHhHCCCchhhHHH
Confidence 887766665554421 111111 1126899999999999999999999 999
Q ss_pred HhCCCCCCCCCCCCCCCCCCCCCC
Q 012233 417 ACAHPFFDDLRDPNTCLPNGRPLP 440 (468)
Q Consensus 417 ll~hp~f~~~~~~~~~~~~~~~~~ 440 (468)
+|+||||+.++.+...+...+..|
T Consensus 286 ll~~~~~~~~~~~~~~~~~~~~~~ 309 (316)
T cd05574 286 IKQHPFFRGVNWALIRHTTPPIIP 309 (316)
T ss_pred HHcCchhhcCChhhcccCCCCCCC
Confidence 999999999887777764333333
No 151
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.1e-42 Score=339.92 Aligned_cols=258 Identities=25% Similarity=0.419 Sum_probs=199.5
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeecc------cchHHHHHHHHHHcC-CCCcccccceeeecCCCCceEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD------KRYKNRELQIMRLLN-HPNVVSLKHCFFSTTEKDELYL 210 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~------~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~~~~~ 210 (468)
.|.+.+.||+||-+.||++... +...||+|++... ...+.+|+.+|.+|+ |.+||+||++- ..+.++
T Consensus 362 ~Yeilk~iG~GGSSkV~kV~~s-~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYE-----v~d~~l 435 (677)
T KOG0596|consen 362 EYEILKQIGSGGSSKVFKVLNS-DKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYE-----VTDGYL 435 (677)
T ss_pred hhhHHHhhcCCCcceeeeeecC-CCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeee-----ccCceE
Confidence 5999999999999999999964 3456777765322 223457999999996 99999999986 446689
Q ss_pred EEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCcccc
Q 012233 211 NLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (468)
Q Consensus 211 ~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~ 290 (468)
||||||...+|-.++.... ...+...++.|..|++.|++++|. +||||.||||.|+|+-. | .+||+|||+|..+
T Consensus 436 YmvmE~Gd~DL~kiL~k~~---~~~~~~~lk~ywkqML~aV~~IH~-~gIVHSDLKPANFLlVk-G-~LKLIDFGIA~aI 509 (677)
T KOG0596|consen 436 YMVMECGDIDLNKILKKKK---SIDPDWFLKFYWKQMLLAVKTIHQ-HGIVHSDLKPANFLLVK-G-RLKLIDFGIANAI 509 (677)
T ss_pred EEEeecccccHHHHHHhcc---CCCchHHHHHHHHHHHHHHHHHHH-hceeecCCCcccEEEEe-e-eEEeeeechhccc
Confidence 9999999988877766543 334445889999999999999998 89999999999999984 4 6999999999988
Q ss_pred CCCCC---CccccccCCccccccccCCC----------CCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhC
Q 012233 291 VPGEP---NISYICSRYYRAPELIFGAT----------EYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILG 357 (468)
Q Consensus 291 ~~~~~---~~~~~gt~~y~aPE~~~~~~----------~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~ 357 (468)
..+.. ....+||+.||+||.+.... +.+.++||||||||||+|+.|++||....+ .+.++ ..+.
T Consensus 510 ~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n--~~aKl-~aI~ 586 (677)
T KOG0596|consen 510 QPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIIN--QIAKL-HAIT 586 (677)
T ss_pred CccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHH--HHHHH-Hhhc
Confidence 66543 34689999999999985321 256799999999999999999999964321 12221 1121
Q ss_pred CCCHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCCCCCCC
Q 012233 358 TPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNTC 432 (468)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~~~~~~ 432 (468)
.| -.++.||.+.. ..++.++++.||..||.+|||+.++|+|||++-..-+...
T Consensus 587 ~P-----------~~~Iefp~~~~-----------~~~li~~mK~CL~rdPkkR~si~eLLqhpFl~~~~i~~~~ 639 (677)
T KOG0596|consen 587 DP-----------NHEIEFPDIPE-----------NDELIDVMKCCLARDPKKRWSIPELLQHPFLQIQPIPVEQ 639 (677)
T ss_pred CC-----------CccccccCCCC-----------chHHHHHHHHHHhcCcccCCCcHHHhcCcccccccccchH
Confidence 22 13455655322 2249999999999999999999999999999876555443
No 152
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=8.1e-42 Score=334.52 Aligned_cols=281 Identities=35% Similarity=0.606 Sum_probs=220.0
Q ss_pred ccceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc------chHHHHHHHHHHcCCCCcccccceeeecCC---CC
Q 012233 136 TISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTE---KD 206 (468)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~---~~ 206 (468)
.++|.+.+.||.|+||.||+|.+..+++.||||++.... ....+|+++++.++||||+++++++..... ..
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 457999999999999999999999999999999884321 234579999999999999999998754432 23
Q ss_pred ceEEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecC
Q 012233 207 ELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGS 286 (468)
Q Consensus 207 ~~~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~ 286 (468)
..++++||||+.+++...+.. ....+++..++.++.||+.||.|||+ .||+|+||||+|||++.++ .++|+|||+
T Consensus 87 ~~~~~lv~~~~~~~l~~~~~~---~~~~~~~~~~~~i~~~l~~al~~lH~-~~i~H~dl~p~nil~~~~~-~~~l~dfg~ 161 (311)
T cd07866 87 RGSVYMVTPYMDHDLSGLLEN---PSVKLTESQIKCYMLQLLEGINYLHE-NHILHRDIKAANILIDNQG-ILKIADFGL 161 (311)
T ss_pred CceEEEEEecCCcCHHHHHhc---cccCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEECCCC-CEEECcCcc
Confidence 446889999999877664432 24568999999999999999999998 8999999999999999888 799999999
Q ss_pred ccccCCCCC------------CccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHH
Q 012233 287 AKMLVPGEP------------NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIK 354 (468)
Q Consensus 287 a~~~~~~~~------------~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~ 354 (468)
+........ .....+++.|+|||.+.+...++.++|||||||++|+|++|++||.+.+.......+..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~ 241 (311)
T cd07866 162 ARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFK 241 (311)
T ss_pred chhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 976533221 12235688899999987665689999999999999999999999999988888888888
Q ss_pred HhCCCCHHHHhhcC--CCCcc-CCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCC
Q 012233 355 ILGTPTREEIKCMN--PNYTE-FKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (468)
Q Consensus 355 ~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f 423 (468)
..+.+....+..+. +.... ...... ...... ....+++++.+||.+||+.||.+|||+.+++.||||
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~~f 311 (311)
T cd07866 242 LCGTPTEETWPGWRSLPGCEGVHSFTNY-PRTLEE-RFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF 311 (311)
T ss_pred HhCCCChhhchhhhhcccccccccCCCC-CccHHH-HcccCChhHHHHHHHHcccCcccCcCHHHHhcCCCC
Confidence 87777665543322 11111 000100 011111 123456889999999999999999999999999998
No 153
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=6.4e-42 Score=340.55 Aligned_cols=286 Identities=31% Similarity=0.536 Sum_probs=214.9
Q ss_pred cceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc----chHHHHHHHHHHcCCCCcccccceeeecCCC-------
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEK------- 205 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~------- 205 (468)
.+|.+.+.||.|+||.||+|.+..+|+.||+|++.... ....+|+.+++.++||||+++++++......
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS 84 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence 36999999999999999999999999999999885432 2345799999999999999999877443211
Q ss_pred --CceEEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEee
Q 012233 206 --DELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICD 283 (468)
Q Consensus 206 --~~~~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~D 283 (468)
.....|+||||+++++...+. ...+++..++.++.||+.||.|||+ .||+||||||+|||++.++..+||+|
T Consensus 85 ~~~~~~~~lv~e~~~~~L~~~~~-----~~~l~~~~~~~~~~qi~~aL~~LH~-~givH~dikp~Nili~~~~~~~kl~d 158 (342)
T cd07854 85 LTELNSVYIVQEYMETDLANVLE-----QGPLSEEHARLFMYQLLRGLKYIHS-ANVLHRDLKPANVFINTEDLVLKIGD 158 (342)
T ss_pred ccccceEEEEeecccccHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCHHHEEEcCCCceEEECC
Confidence 123578999999986655432 3468899999999999999999998 89999999999999986655799999
Q ss_pred ecCccccCCCCC----CccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCC
Q 012233 284 FGSAKMLVPGEP----NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTP 359 (468)
Q Consensus 284 FG~a~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~ 359 (468)
||.+........ .....++..|+|||.+.+...++.++|||||||++|+|++|+.||...+..+....+......+
T Consensus 159 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 238 (342)
T cd07854 159 FGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVV 238 (342)
T ss_pred cccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCC
Confidence 999876532211 1234578899999987665568899999999999999999999999888777777666554333
Q ss_pred CHHHHhhcCCCCccCCC--CcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCCCC
Q 012233 360 TREEIKCMNPNYTEFKF--PQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDP 429 (468)
Q Consensus 360 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~~~ 429 (468)
................. ......+.. .+.+.++.++.+||.+||+.||.+|||+.+++.||||+.+..+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~~~~~~ 309 (342)
T cd07854 239 REEDRNELLNVIPSFVRNDGGEPRRPLR-DLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSCYSCP 309 (342)
T ss_pred ChHHhhhhhhhhhhhhhhcccccCCCHH-HHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCccccccCC
Confidence 32222111000000000 000011111 1234578999999999999999999999999999999976543
No 154
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-43 Score=321.49 Aligned_cols=292 Identities=26% Similarity=0.415 Sum_probs=217.4
Q ss_pred ceEEe-ceecccCceEEEEEEEcCCCCEEEEEEeeccc----chHHHHHHHHHHcC-CCCcccccceeeecCCCCceEEE
Q 012233 138 SYMAE-RVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK----RYKNRELQIMRLLN-HPNVVSLKHCFFSTTEKDELYLN 211 (468)
Q Consensus 138 ~y~~~-~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~----~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~~~~~~ 211 (468)
-|.+. ++||+|+|+.|--|....+|..||||++.+.. ....+|++++..++ |+||++|+++| +++..+|
T Consensus 78 ~YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefF-----Edd~~FY 152 (463)
T KOG0607|consen 78 MYKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFF-----EDDTRFY 152 (463)
T ss_pred HHHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHh-----cccceEE
Confidence 35543 68999999999999999999999999996653 34458999999986 99999999999 7777799
Q ss_pred EEeecccch-HHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCC--cEEEeeecCcc
Q 012233 212 LVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTH--QLKICDFGSAK 288 (468)
Q Consensus 212 lv~e~~~~~-ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~--~vkL~DFG~a~ 288 (468)
||||-+.|| +|..+. ....|.+.++.+++.+|+.||.|||. +||.||||||+|||-..-.+ -||||||.+..
T Consensus 153 LVfEKm~GGplLshI~----~~~~F~E~EAs~vvkdia~aLdFlH~-kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgS 227 (463)
T KOG0607|consen 153 LVFEKMRGGPLLSHIQ----KRKHFNEREASRVVKDIASALDFLHT-KGIAHRDLKPENILCESPNKVSPVKICDFDLGS 227 (463)
T ss_pred EEEecccCchHHHHHH----HhhhccHHHHHHHHHHHHHHHHHHhh-cCcccccCCccceeecCCCCcCceeeecccccc
Confidence 999999876 333222 25679999999999999999999998 99999999999999753321 48999999875
Q ss_pred ccCCC--------CCCccccccCCcccccccc----CCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHH---------
Q 012233 289 MLVPG--------EPNISYICSRYYRAPELIF----GATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVD--------- 347 (468)
Q Consensus 289 ~~~~~--------~~~~~~~gt~~y~aPE~~~----~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~--------- 347 (468)
-+.-. ....+.+|+..|||||++. ....|+.++|+||||||||.||.|.+||.+.-+.+
T Consensus 228 g~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~C 307 (463)
T KOG0607|consen 228 GIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVC 307 (463)
T ss_pred ccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCcc
Confidence 43211 2234678889999999973 23459999999999999999999999998743321
Q ss_pred ------HHHHHHHHhCCCCHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCC
Q 012233 348 ------QLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHP 421 (468)
Q Consensus 348 ------~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp 421 (468)
.+..|.+ ..+.||. .-|..+|.+++|||..+|..|+..|.++.++++||
T Consensus 308 r~CQ~~LFesIQE-----------------GkYeFPd--------kdWahIS~eakdlisnLlvrda~~rlsa~~vlnhP 362 (463)
T KOG0607|consen 308 RVCQNKLFESIQE-----------------GKYEFPD--------KDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHP 362 (463)
T ss_pred HHHHHHHHHHHhc-----------------cCCcCCh--------hhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCc
Confidence 1122222 2334443 13456999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCcccccCHHHHhcCCHHHHHhccccc
Q 012233 422 FFDDLRDPNTCLPNGRPLPTLFNFTAQELAGASNELRQRLIPEH 465 (468)
Q Consensus 422 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (468)
|++.+..+ +.++..+-+....+.-+-.+-.+..=-++|.++.|
T Consensus 363 w~~~~~~e-kalptp~v~~r~~s~~~lslfa~~aia~~R~~~~h 405 (463)
T KOG0607|consen 363 WVQRCAPE-KALPTPQVLQRNSSTMDLSLFAAEAIALNRQLSQH 405 (463)
T ss_pred cccccchh-ccCCCCcccccCccchhhHHHHHHHHHHhhccchh
Confidence 99988766 22233333333333332222222222356666655
No 155
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=9.1e-42 Score=329.89 Aligned_cols=274 Identities=35% Similarity=0.646 Sum_probs=216.3
Q ss_pred eEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc------chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEE
Q 012233 139 YMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNL 212 (468)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~l 212 (468)
|.+.+.||.|++|.||+|.+..+|..||+|++.... ....+|+.+++.++||||+++++++ .+..+.|+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~-----~~~~~~~i 75 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVV-----HSENKLYL 75 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhhee-----ccCCeEEE
Confidence 567789999999999999999999999999885432 2345799999999999999999988 44457899
Q ss_pred EeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCC
Q 012233 213 VLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP 292 (468)
Q Consensus 213 v~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~ 292 (468)
||||+++.+...+.... ...+++..+..++.|++.||.|||+ ++++|+||+|+||+++.++ .++|+|||++.....
T Consensus 76 v~e~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~i~~~L~~lH~-~~~~H~dl~p~nil~~~~~-~~~l~df~~~~~~~~ 151 (283)
T cd07835 76 VFEFLDLDLKKYMDSSP--LTGLDPPLIKSYLYQLLQGIAYCHS-HRVLHRDLKPQNLLIDREG-ALKLADFGLARAFGV 151 (283)
T ss_pred EEeccCcCHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHH-CCeeCCCCCHHHEEEcCCC-cEEEeecccccccCC
Confidence 99999877666544322 2468899999999999999999998 8999999999999999877 799999999875432
Q ss_pred CC-CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcC--C
Q 012233 293 GE-PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMN--P 369 (468)
Q Consensus 293 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~--~ 369 (468)
.. ......+++.|+|||++.+...++.++|+|||||++|+|++|.+||...+..+.+.++++..+.|....+.... +
T Consensus 152 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (283)
T cd07835 152 PVRTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLP 231 (283)
T ss_pred CccccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhch
Confidence 21 22234568899999988765557899999999999999999999999988888888888887777665442211 1
Q ss_pred CCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCC
Q 012233 370 NYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (468)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f 423 (468)
.+. ..++....... ....+.++.++.++|.+||+.||.+|||+.+++.||||
T Consensus 232 ~~~-~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~ 283 (283)
T cd07835 232 DYK-PTFPKWARQDL-SKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF 283 (283)
T ss_pred hhh-hhcccccccch-hhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence 110 01111111111 11235678999999999999999999999999999998
No 156
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=1e-41 Score=330.10 Aligned_cols=276 Identities=38% Similarity=0.686 Sum_probs=221.2
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeecc------cchHHHHHHHHHHcCCCCcccccceeeecCCCCceEEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~------~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~ 211 (468)
+|++.+.||+|+||.||+|.+..+++.||+|.+... .....+|+++++.++|+||+++++++.. ....+
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~~ 76 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRR-----KGRLY 76 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEE-----CCEEE
Confidence 599999999999999999999999999999987532 1345679999999999999999999843 44588
Q ss_pred EEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccC
Q 012233 212 LVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (468)
Q Consensus 212 lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~ 291 (468)
+||||++++++..... ....+++..++.++.||+.||.|||+ .||+|+||+|+||+++.++ .+||+|||++....
T Consensus 77 iv~e~~~~~~l~~~~~---~~~~~~~~~~~~~~~~i~~~l~~LH~-~~i~H~dl~~~ni~~~~~~-~~kl~d~g~~~~~~ 151 (288)
T cd07833 77 LVFEYVERTLLELLEA---SPGGLPPDAVRSYIWQLLQAIAYCHS-HNIIHRDIKPENILVSESG-VLKLCDFGFARALR 151 (288)
T ss_pred EEEecCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHeEECCCC-CEEEEeeecccccC
Confidence 9999999987765432 24558899999999999999999998 8999999999999999887 79999999987765
Q ss_pred CCC--CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhc--
Q 012233 292 PGE--PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCM-- 367 (468)
Q Consensus 292 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~-- 367 (468)
... ......++..|+|||++.+...++.++|+||||+++|+|++|++||.+....+.+..+...++.........+
T Consensus 152 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (288)
T cd07833 152 ARPASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSS 231 (288)
T ss_pred CCccccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhccc
Confidence 433 3334677899999999977646899999999999999999999999988888888777776665554333222
Q ss_pred CCCCccCCCCcccC-CCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCC
Q 012233 368 NPNYTEFKFPQIKA-HPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (468)
Q Consensus 368 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f 423 (468)
.+.+....++.... ..+...++..++.++.+||++||..||++||++.+++.||||
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~f 288 (288)
T cd07833 232 NPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPYF 288 (288)
T ss_pred CccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcCCCC
Confidence 12222222222111 112223445568999999999999999999999999999998
No 157
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=1.3e-41 Score=332.98 Aligned_cols=282 Identities=29% Similarity=0.492 Sum_probs=213.8
Q ss_pred cceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc------chHHHHHHHHHHcCCCCcccccceeeecCC---CCc
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTE---KDE 207 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~---~~~ 207 (468)
.+|.+.+.||+|+||.||+|.+..+++.||||.+.... ....+|+.+++.++||||+++++++..... ...
T Consensus 12 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 91 (310)
T cd07865 12 SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYK 91 (310)
T ss_pred hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCC
Confidence 46999999999999999999999999999999885332 123469999999999999999998754332 123
Q ss_pred eEEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCc
Q 012233 208 LYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSA 287 (468)
Q Consensus 208 ~~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a 287 (468)
...++||||+.+++...+.. ....+++..++.++.||+.||.|||+ +||+|+||||+|||++.++ .+||+|||++
T Consensus 92 ~~~~lv~e~~~~~l~~~l~~---~~~~~~~~~~~~i~~qi~~al~~lH~-~~i~H~dl~p~nil~~~~~-~~kl~dfg~~ 166 (310)
T cd07865 92 GSFYLVFEFCEHDLAGLLSN---KNVKFTLSEIKKVMKMLLNGLYYIHR-NKILHRDMKAANILITKDG-ILKLADFGLA 166 (310)
T ss_pred ceEEEEEcCCCcCHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHH-CCeeccCCCHHHEEECCCC-cEEECcCCCc
Confidence 45789999999877665432 23468999999999999999999998 8999999999999999887 7999999999
Q ss_pred cccCCCCC-----CccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHH
Q 012233 288 KMLVPGEP-----NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTRE 362 (468)
Q Consensus 288 ~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~ 362 (468)
........ .....++..|+|||.+.+...++.++|+||||+++|+|++|+.||.+.+.......+....+..+..
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (310)
T cd07865 167 RAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPE 246 (310)
T ss_pred ccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChh
Confidence 76533221 1234568889999998766557899999999999999999999999887777666666665554443
Q ss_pred HHhhcC--CCCccCCCCcccCCCccccc-ccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCC
Q 012233 363 EIKCMN--PNYTEFKFPQIKAHPWHKIF-HKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (468)
Q Consensus 363 ~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f 423 (468)
.+.... ..+....++..........+ +...+..+.+||.+||..||.+|||++++++||||
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~~f 310 (310)
T cd07865 247 VWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNHDFF 310 (310)
T ss_pred hcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcCCCC
Confidence 322211 01111112211111111111 11246788999999999999999999999999998
No 158
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=4.1e-42 Score=332.92 Aligned_cols=260 Identities=25% Similarity=0.400 Sum_probs=205.6
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc-----chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNL 212 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~l 212 (468)
+|++.+.||+|+||.||+|.+..+|..||+|.+.... ....+|+.+++.++|+||+++++++ ....++++
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~~~l 76 (286)
T cd06622 2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAF-----FIEGAVYM 76 (286)
T ss_pred hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhhe-----ecCCeEEE
Confidence 5889999999999999999999899999999885431 2345799999999999999999988 34456899
Q ss_pred EeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCC
Q 012233 213 VLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP 292 (468)
Q Consensus 213 v~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~ 292 (468)
||||++++.+..+.........+++..+..++.||+.||.|||+..||+|+||||+|||++.++ .++|+|||++.....
T Consensus 77 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~-~~~l~dfg~~~~~~~ 155 (286)
T cd06622 77 CMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNG-QVKLCDFGVSGNLVA 155 (286)
T ss_pred EEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCC-CEEEeecCCcccccC
Confidence 9999998655433322222347899999999999999999999635999999999999999877 799999999876532
Q ss_pred CCCCccccccCCccccccccCCC-----CCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhc
Q 012233 293 GEPNISYICSRYYRAPELIFGAT-----EYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCM 367 (468)
Q Consensus 293 ~~~~~~~~gt~~y~aPE~~~~~~-----~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 367 (468)
. ......+++.|+|||.+.+.. .++.++|+|||||++|+|++|..||...........+......+.
T Consensus 156 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~------- 227 (286)
T cd06622 156 S-LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDP------- 227 (286)
T ss_pred C-ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCC-------
Confidence 2 223456788999999985432 257899999999999999999999976554333332222111110
Q ss_pred CCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCCCC
Q 012233 368 NPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDP 429 (468)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~~~ 429 (468)
..++..+++++.+||.+||+.+|.+||++.++++||||...+..
T Consensus 228 ------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~~~~~ 271 (286)
T cd06622 228 ------------------PTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKYKNA 271 (286)
T ss_pred ------------------CCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcChhhhhccCC
Confidence 01234578999999999999999999999999999999987765
No 159
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=6.7e-42 Score=330.66 Aligned_cols=258 Identities=26% Similarity=0.395 Sum_probs=203.9
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeecccc-----hHHHHHH-HHHHcCCCCcccccceeeecCCCCceEEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKR-----YKNRELQ-IMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~~-----~~~~E~~-il~~l~hpnIv~l~~~~~~~~~~~~~~~~ 211 (468)
+|.+.+.||+|+||.||++.+..+|+.||||.+..... ....|+. .++.++||||+++++++. ....+|
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~-----~~~~~~ 76 (283)
T cd06617 2 DLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALF-----REGDVW 76 (283)
T ss_pred CceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEe-----cCCcEE
Confidence 58999999999999999999999999999998864321 1223444 467778999999999884 334589
Q ss_pred EEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcC-CccccCCCCCCeeecCCCCcEEEeeecCcccc
Q 012233 212 LVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVV-GVCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (468)
Q Consensus 212 lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~-givHrDlkp~NILl~~~~~~vkL~DFG~a~~~ 290 (468)
+||||+++++..++.........+++..++.++.||+.||.|||+ + +++||||||+|||++.++ .+||+|||++...
T Consensus 77 lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~-~~~i~h~dlkp~nil~~~~~-~~kl~dfg~~~~~ 154 (283)
T cd06617 77 ICMEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHS-KLSVIHRDVKPSNVLINRNG-QVKLCDFGISGYL 154 (283)
T ss_pred EEhhhhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhh-cCCeecCCCCHHHEEECCCC-CEEEeeccccccc
Confidence 999999988777665544445678999999999999999999997 6 999999999999999888 7999999999766
Q ss_pred CCCCCCccccccCCccccccccCC---CCCCcchhHHHHHHHHHHHHhCCCCCCCC-CcHHHHHHHHHHhCCCCHHHHhh
Q 012233 291 VPGEPNISYICSRYYRAPELIFGA---TEYTTAIDMWSIGCVLAELLLGQPLFPGE-SGVDQLVEIIKILGTPTREEIKC 366 (468)
Q Consensus 291 ~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~~DvwSlG~il~ell~G~~pf~~~-~~~~~~~~i~~~~~~~~~~~~~~ 366 (468)
..........++..|+|||.+.+. ..++.++|+|||||++|+|++|+.||... ...+.+..+....
T Consensus 155 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~---------- 224 (283)
T cd06617 155 VDSVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEEP---------- 224 (283)
T ss_pred ccccccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhcC----------
Confidence 443333345688999999988542 33688999999999999999999999653 2333333332210
Q ss_pred cCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCCCC
Q 012233 367 MNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDP 429 (468)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~~~ 429 (468)
...+ ....++.++.+||.+||..+|.+||++.+++.||||+.....
T Consensus 225 ------~~~~-----------~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~ 270 (283)
T cd06617 225 ------SPQL-----------PAEKFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFELHLSK 270 (283)
T ss_pred ------CCCC-----------CccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhhhcccc
Confidence 0000 112368899999999999999999999999999999986543
No 160
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=5.4e-42 Score=340.34 Aligned_cols=285 Identities=34% Similarity=0.668 Sum_probs=223.0
Q ss_pred ccceEEeceecccCceEEEEEEEcCCCCEEEEEEeecc------cchHHHHHHHHHHc-CCCCcccccceeeecCCCCce
Q 012233 136 TISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD------KRYKNRELQIMRLL-NHPNVVSLKHCFFSTTEKDEL 208 (468)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~------~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~~~ 208 (468)
..+|.+.+.||+|+||.||+|.+..+|+.+|+|++... .....+|+.+++.+ +||||+++++++.. .+..
T Consensus 6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~---~~~~ 82 (337)
T cd07852 6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKA---ENDK 82 (337)
T ss_pred hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeecc---CCCc
Confidence 34699999999999999999999889999999987432 12344699999999 99999999998743 2334
Q ss_pred EEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCcc
Q 012233 209 YLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAK 288 (468)
Q Consensus 209 ~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~ 288 (468)
..|+||||+.+++...+.. ..+++..++.++.||+.||.|||+ .||+|+||||+|||++.++ .+||+|||++.
T Consensus 83 ~~~lv~e~~~~~L~~~~~~-----~~~~~~~~~~i~~qi~~~L~~LH~-~~i~H~dl~p~nill~~~~-~~kl~d~g~~~ 155 (337)
T cd07852 83 DIYLVFEYMETDLHAVIRA-----NILEDVHKRYIMYQLLKALKYIHS-GNVIHRDLKPSNILLNSDC-RVKLADFGLAR 155 (337)
T ss_pred eEEEEecccccCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEEcCCC-cEEEeeccchh
Confidence 5789999999876654432 267888888999999999999998 8999999999999999988 79999999997
Q ss_pred ccCCCC------CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHH
Q 012233 289 MLVPGE------PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTRE 362 (468)
Q Consensus 289 ~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~ 362 (468)
...... ......|+..|+|||.+.+...++.++|+|||||++|+|++|+.||.+....+....+....+.+...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~ 235 (337)
T cd07852 156 SLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAE 235 (337)
T ss_pred ccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHH
Confidence 654322 12235678999999998766668899999999999999999999999988888888888887777655
Q ss_pred HHhhcCCCCccCCCCcc---cCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCCCCCC
Q 012233 363 EIKCMNPNYTEFKFPQI---KAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNT 431 (468)
Q Consensus 363 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~~~~~ 431 (468)
.+..+...+....+..+ ..... ....+.++.++.+||.+||+.||.+|||+.++++||||+.+..+..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~~~~~~ 306 (337)
T cd07852 236 DIESIKSPFAATMLDSLPSRPRKPL-DELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQFHNPSD 306 (337)
T ss_pred HHHHHHhhhHHHhhhhcccccccch-hhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhhccCCC
Confidence 44332221111111100 01111 1122347899999999999999999999999999999999865433
No 161
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=1e-41 Score=329.09 Aligned_cols=274 Identities=39% Similarity=0.739 Sum_probs=221.5
Q ss_pred eEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc------chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEE
Q 012233 139 YMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNL 212 (468)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~l 212 (468)
|.+.+.||.|++|.||+|.+..+|+.+++|.+.... ....+|+.+++.++|+||+++++++ .+...+++
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~~ 75 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVF-----RHKGDLYL 75 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhh-----ccCCCEEE
Confidence 567788999999999999998899999999885432 2345799999999999999999988 34456889
Q ss_pred EeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCC
Q 012233 213 VLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP 292 (468)
Q Consensus 213 v~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~ 292 (468)
||||+++++...+... ...+++..+..++.||+.||.|||+ .||+|+||||+||+++.++ .++|+|||.+.....
T Consensus 76 v~e~~~~~l~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~LH~-~~i~H~dl~p~nili~~~~-~~~l~df~~~~~~~~ 150 (283)
T cd05118 76 VFEFMDTDLYKLIKDR---QRGLPESLIKSYLYQLLQGLAFCHS-HGILHRDLKPENLLINTEG-VLKLADFGLARSFGS 150 (283)
T ss_pred EEeccCCCHHHHHHhh---cccCCHHHHHHHHHHHHHHHHHHHH-CCeeecCcCHHHEEECCCC-cEEEeeeeeeEecCC
Confidence 9999998777654432 3568899999999999999999998 8999999999999999887 799999999976644
Q ss_pred CC-CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCC--
Q 012233 293 GE-PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP-- 369 (468)
Q Consensus 293 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-- 369 (468)
.. ......++..|+|||.+.+...++.++|+|||||++|+|++|+.||...+..+.+..+...++.+....+.....
T Consensus 151 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (283)
T cd05118 151 PVRPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLA 230 (283)
T ss_pred CcccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhh
Confidence 33 223356788999999987664689999999999999999999999999998888888888887776655544332
Q ss_pred CCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCC
Q 012233 370 NYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (468)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f 423 (468)
.+..+.++....... ....+.++.++.+||.+||+.||.+||++.+++.||||
T Consensus 231 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~ 283 (283)
T cd05118 231 RNYKFSFPKKAGMPL-PKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF 283 (283)
T ss_pred hhhhhhhccccccCH-HHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence 222223322211111 22335678999999999999999999999999999997
No 162
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=3.5e-41 Score=335.20 Aligned_cols=283 Identities=34% Similarity=0.619 Sum_probs=219.9
Q ss_pred cceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc------chHHHHHHHHHHcCCCCcccccceeeecCC-CCceE
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTE-KDELY 209 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~-~~~~~ 209 (468)
.+|.+.+.||+|+||.||+|.+..+|+.||||++.... ....+|+.+++.++||||+++++++..... .....
T Consensus 15 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 94 (342)
T cd07879 15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQD 94 (342)
T ss_pred cceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCce
Confidence 36999999999999999999999999999999885421 224579999999999999999998854322 12234
Q ss_pred EEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccc
Q 012233 210 LNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (468)
Q Consensus 210 ~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~ 289 (468)
.|+||||+...+.... ...+++..+..++.|++.||.|||+ .||+||||||+|||++.++ .+||+|||+++.
T Consensus 95 ~~lv~e~~~~~l~~~~------~~~~~~~~~~~~~~qi~~aL~~LH~-~~i~H~dlkp~NIll~~~~-~~kL~dfg~~~~ 166 (342)
T cd07879 95 FYLVMPYMQTDLQKIM------GHPLSEDKVQYLVYQMLCGLKYIHS-AGIIHRDLKPGNLAVNEDC-ELKILDFGLARH 166 (342)
T ss_pred EEEEecccccCHHHHH------cCCCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEECCCC-CEEEeeCCCCcC
Confidence 6899999986544321 2458889999999999999999998 8999999999999999887 799999999875
Q ss_pred cCCCCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCC
Q 012233 290 LVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP 369 (468)
Q Consensus 290 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 369 (468)
... ......+++.|+|||.+.+...++.++|||||||++|||++|+.||.+.+....+..++...+.+..........
T Consensus 167 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (342)
T cd07879 167 ADA--EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLED 244 (342)
T ss_pred CCC--CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcc
Confidence 422 233457788999999987655588999999999999999999999998887888888888777666544332211
Q ss_pred CCcc---CCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCCCCC
Q 012233 370 NYTE---FKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPN 430 (468)
Q Consensus 370 ~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~~~~ 430 (468)
.... ...+......+.. ..+.+++++.+||.+||+.||.+||++.+++.||||+.+++..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~~~ 307 (342)
T cd07879 245 KAAKSYIKSLPKYPRKDFST-LFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRDAD 307 (342)
T ss_pred cchHHHHhhcCCcccchHHH-HhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhccccc
Confidence 1000 0011111111111 1235788999999999999999999999999999999987644
No 163
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=1.8e-41 Score=337.46 Aligned_cols=310 Identities=33% Similarity=0.603 Sum_probs=232.9
Q ss_pred cceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc------chHHHHHHHHHHcCCCCcccccceeeecCC-CCceE
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTE-KDELY 209 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~-~~~~~ 209 (468)
++|.+.+.||+|+||.||+|.+..+++.||+|++.... ....+|+.+++.+.||||+++++++..... .....
T Consensus 15 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 94 (343)
T cd07851 15 DRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQD 94 (343)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccccc
Confidence 36999999999999999999999999999999875421 223469999999999999999987744332 22234
Q ss_pred EEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccc
Q 012233 210 LNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (468)
Q Consensus 210 ~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~ 289 (468)
+++|+||+++++.+++.. ..+++..++.++.||+.||.|||+ .||+|+||||+||+++.++ .++|+|||++..
T Consensus 95 ~~lv~e~~~~~L~~~~~~-----~~l~~~~~~~~~~ql~~aL~~LH~-~gi~H~dlkp~Nill~~~~-~~kL~dfg~~~~ 167 (343)
T cd07851 95 VYLVTHLMGADLNNIVKC-----QKLSDDHIQFLVYQILRGLKYIHS-AGIIHRDLKPSNIAVNEDC-ELKILDFGLARH 167 (343)
T ss_pred EEEEEecCCCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHeEECCCC-CEEEcccccccc
Confidence 889999998877665442 468999999999999999999998 8999999999999999887 799999999976
Q ss_pred cCCCCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCC
Q 012233 290 LVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP 369 (468)
Q Consensus 290 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 369 (468)
... ......++..|+|||.+.+...++.++|||||||++|+|++|+.||.+....+.+..+....+.+....+..+..
T Consensus 168 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 245 (343)
T cd07851 168 TDD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISS 245 (343)
T ss_pred ccc--cccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccc
Confidence 533 234457788999999986655688999999999999999999999999888888888888877776554433221
Q ss_pred CCcc-C--CCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCCCCCCCCCCCCCCCcccccC
Q 012233 370 NYTE-F--KFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNTCLPNGRPLPTLFNFT 446 (468)
Q Consensus 370 ~~~~-~--~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~~~~~~~~~~~~~~~~~~~~ 446 (468)
.... + ..+......+.. ....+++++.+||.+||+.||.+|||+.+++.||||++...+... +++++++ .
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~-~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~~~~~~~~-----~~~~~~~-~ 318 (343)
T cd07851 246 ESARNYIQSLPQMPKKDFKE-VFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAEYHDPEDE-----PVAPPYD-Q 318 (343)
T ss_pred hhHHHHHHhccccCCCCHHH-HhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCccccCCCccc-----ccccccC-c
Confidence 1100 0 000000011111 223468999999999999999999999999999999987665432 2233332 1
Q ss_pred HHHHhcCCHHHHHhcc
Q 012233 447 AQELAGASNELRQRLI 462 (468)
Q Consensus 447 ~~~~~~~~~~~~~~~~ 462 (468)
+=+-.+.+.++|+-++
T Consensus 319 ~~~~~~~~~~~~~~~~ 334 (343)
T cd07851 319 SFESRDLTVDEWKELV 334 (343)
T ss_pred chhhhhcCHHHHHHHh
Confidence 1223345566666554
No 164
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=1.5e-41 Score=329.86 Aligned_cols=247 Identities=30% Similarity=0.519 Sum_probs=205.2
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc-------chHHHHHHHHHHcCCCCcccccceeeecCCCCceEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYL 210 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~ 210 (468)
+|.+.+.||+|+||.||++.+..+++.||+|++.... ....+|+++++.++||||+++++++ .+...+
T Consensus 2 ~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~ 76 (290)
T cd05580 2 DFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSF-----QDDSNL 76 (290)
T ss_pred ceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEE-----EcCCeE
Confidence 5999999999999999999999999999999885432 2345799999999999999999988 444568
Q ss_pred EEEeecccch-HHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccc
Q 012233 211 NLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (468)
Q Consensus 211 ~lv~e~~~~~-ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~ 289 (468)
|+||||++++ +.+.+.. ...+++..+..++.||+.||.|||+ .||+|+||+|.||||+.++ .+||+|||++..
T Consensus 77 ~~v~e~~~~~~L~~~~~~----~~~l~~~~~~~~~~qil~~l~~lH~-~~i~H~dl~p~nili~~~~-~~kl~dfg~~~~ 150 (290)
T cd05580 77 YLVMEYVPGGELFSHLRK----SGRFPEPVARFYAAQVVLALEYLHS-LDIVYRDLKPENLLLDSDG-YIKITDFGFAKR 150 (290)
T ss_pred EEEEecCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHH-CCEecCCCCHHHEEECCCC-CEEEeeCCCccc
Confidence 9999999654 4443322 3668999999999999999999998 8999999999999999888 799999999987
Q ss_pred cCCCCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCC
Q 012233 290 LVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP 369 (468)
Q Consensus 290 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 369 (468)
.... .....+++.|+|||.+.+. .++.++|+||||+++|+|++|..||...+..+....+...
T Consensus 151 ~~~~--~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-------------- 213 (290)
T cd05580 151 VKGR--TYTLCGTPEYLAPEIILSK-GYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEG-------------- 213 (290)
T ss_pred cCCC--CCCCCCCccccChhhhcCC-CCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC--------------
Confidence 6443 3455789999999998655 4789999999999999999999999877754444443320
Q ss_pred CCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCC-----CHHHHhCCCCCCCCC
Q 012233 370 NYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRC-----TALEACAHPFFDDLR 427 (468)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~-----s~~ell~hp~f~~~~ 427 (468)
... ++..++..++++|.+||..||.+|+ ++.++++||||+.+.
T Consensus 214 ---~~~------------~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~ 261 (290)
T cd05580 214 ---KVR------------FPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAGID 261 (290)
T ss_pred ---Ccc------------CCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCcccccCC
Confidence 111 2344688999999999999999999 999999999999876
No 165
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.3e-44 Score=318.04 Aligned_cols=283 Identities=30% Similarity=0.516 Sum_probs=229.8
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeecc-c-----chHHHHHHHHHHcCCCCcccccceeee---cCCCCce
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD-K-----RYKNRELQIMRLLNHPNVVSLKHCFFS---TTEKDEL 208 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~-~-----~~~~~E~~il~~l~hpnIv~l~~~~~~---~~~~~~~ 208 (468)
.|.-...||+|.||.||+|+.+.+|+.||+|++.-+ + ....+|+.+|..|.|+|++.++..+-+ ....+..
T Consensus 18 ~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~ 97 (376)
T KOG0669|consen 18 KYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRA 97 (376)
T ss_pred HHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccc
Confidence 377778899999999999999999999999876331 1 123479999999999999998887633 2334455
Q ss_pred EEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCcc
Q 012233 209 YLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAK 288 (468)
Q Consensus 209 ~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~ 288 (468)
.+|+||++|..++..++.. ....++...++.++.+++.||.|+|+ ..|+|||+|++|+||+.++ .+||+|||+++
T Consensus 98 t~ylVf~~cehDLaGlLsn---~~vr~sls~Ikk~Mk~Lm~GL~~iHr-~kilHRDmKaaNvLIt~dg-ilklADFGlar 172 (376)
T KOG0669|consen 98 TFYLVFDFCEHDLAGLLSN---RKVRFSLSEIKKVMKGLMNGLYYIHR-NKILHRDMKAANVLITKDG-ILKLADFGLAR 172 (376)
T ss_pred eeeeeHHHhhhhHHHHhcC---ccccccHHHHHHHHHHHHHHHHHHHH-hhHHhhcccHhhEEEcCCc-eEEeecccccc
Confidence 6899999999887776543 34678999999999999999999998 8999999999999999998 89999999997
Q ss_pred ccCCCCC-----CccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHH
Q 012233 289 MLVPGEP-----NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREE 363 (468)
Q Consensus 289 ~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~ 363 (468)
.+..... ....+.|.+|++||.+.|...|+++.|||..|||+.||.+|.+.|.+.+...++..|-..+|..+.+.
T Consensus 173 ~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkev 252 (376)
T KOG0669|consen 173 AFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEV 252 (376)
T ss_pred ceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCccc
Confidence 6643221 23346699999999999999999999999999999999999999999999999999999999999888
Q ss_pred HhhcC--CCCccCCCCcccCCCccccc----ccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCC
Q 012233 364 IKCMN--PNYTEFKFPQIKAHPWHKIF----HKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDD 425 (468)
Q Consensus 364 ~~~~~--~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~ 425 (468)
|..+. +.|..+..+.++.......- +---.+++.||+.+||.+||.+|++++++|+|.||..
T Consensus 253 WP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~k 320 (376)
T KOG0669|consen 253 WPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWK 320 (376)
T ss_pred CCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhhc
Confidence 87654 44444443333332222110 0012468999999999999999999999999999976
No 166
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-43 Score=343.48 Aligned_cols=241 Identities=24% Similarity=0.400 Sum_probs=202.0
Q ss_pred eEEeceecccCceEEEEEEEcCCCCEEEEEEeecccchHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEEEeeccc
Q 012233 139 YMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVLEYIS 218 (468)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv~e~~~ 218 (468)
..-++-||+|+.|.||+|+. .++.||||++.. ..+.+++-|++|+||||+.+.++| ....++|||||||.
T Consensus 126 IsELeWlGSGaQGAVF~Grl--~netVAVKKV~e---lkETdIKHLRkLkH~NII~FkGVC-----tqsPcyCIiMEfCa 195 (904)
T KOG4721|consen 126 ISELEWLGSGAQGAVFLGRL--HNETVAVKKVRE---LKETDIKHLRKLKHPNIITFKGVC-----TQSPCYCIIMEFCA 195 (904)
T ss_pred hhhhhhhccCcccceeeeec--cCceehhHHHhh---hhhhhHHHHHhccCcceeeEeeee-----cCCceeEEeeeccc
Confidence 33456799999999999997 679999997743 334588899999999999999999 66678999999999
Q ss_pred ch-HHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCCCCCCc
Q 012233 219 ET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGEPNI 297 (468)
Q Consensus 219 ~~-ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~~~~~~ 297 (468)
.| |+.+++. .+.+....+..|..+|+.|+.|||. +.|||||||.-||||..+. .|||+|||.++.........
T Consensus 196 ~GqL~~VLka----~~~itp~llv~Wsk~IA~GM~YLH~-hKIIHRDLKSPNiLIs~~d-~VKIsDFGTS~e~~~~STkM 269 (904)
T KOG4721|consen 196 QGQLYEVLKA----GRPITPSLLVDWSKGIAGGMNYLHL-HKIIHRDLKSPNILISYDD-VVKISDFGTSKELSDKSTKM 269 (904)
T ss_pred cccHHHHHhc----cCccCHHHHHHHHHHhhhhhHHHHH-hhHhhhccCCCceEeeccc-eEEeccccchHhhhhhhhhh
Confidence 55 5554443 5778888899999999999999997 9999999999999999887 79999999999887777778
Q ss_pred cccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCCccCCCC
Q 012233 298 SYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFP 377 (468)
Q Consensus 298 ~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (468)
.++||..|||||++...+ .++++|||||||+|||||||..||.+-+....+ ..
T Consensus 270 SFaGTVaWMAPEvIrneP-csEKVDIwSfGVVLWEmLT~EiPYkdVdssAII----wG---------------------- 322 (904)
T KOG4721|consen 270 SFAGTVAWMAPEVIRNEP-CSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAII----WG---------------------- 322 (904)
T ss_pred hhhhhHhhhCHHHhhcCC-cccccceehhHHHHHHHHhcCCCccccchheeE----Ee----------------------
Confidence 899999999999997665 899999999999999999999999775433221 11
Q ss_pred cccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCC
Q 012233 378 QIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (468)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f 423 (468)
...+.++...+..+++-++=||+.||+-.|..||++.++|.|-=+
T Consensus 323 -VGsNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldI 367 (904)
T KOG4721|consen 323 -VGSNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDI 367 (904)
T ss_pred -ccCCcccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhh
Confidence 122233334667789999999999999999999999999998543
No 167
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=2e-41 Score=335.96 Aligned_cols=278 Identities=37% Similarity=0.580 Sum_probs=218.7
Q ss_pred ceE-EeceecccCceEEEEEEEcCCCCEEEEEEeecccc------------------hHHHHHHHHHHcCCCCcccccce
Q 012233 138 SYM-AERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKR------------------YKNRELQIMRLLNHPNVVSLKHC 198 (468)
Q Consensus 138 ~y~-~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~~------------------~~~~E~~il~~l~hpnIv~l~~~ 198 (468)
+|. +.+.||.|+||.||+|.+..+++.||||++..... ...+|+.+++.++|+||++++++
T Consensus 9 ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~ 88 (335)
T PTZ00024 9 RYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDV 88 (335)
T ss_pred chhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEE
Confidence 465 56789999999999999999999999998854321 24579999999999999999998
Q ss_pred eeecCCCCceEEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCc
Q 012233 199 FFSTTEKDELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQ 278 (468)
Q Consensus 199 ~~~~~~~~~~~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~ 278 (468)
+. ...+.++||||+.+++...+.. ...+++..+..++.||+.||.|||+ .||+|+||||+|||++.++ .
T Consensus 89 ~~-----~~~~~~lv~e~~~~~l~~~l~~----~~~~~~~~~~~~~~ql~~aL~~LH~-~~i~H~dl~~~nill~~~~-~ 157 (335)
T PTZ00024 89 YV-----EGDFINLVMDIMASDLKKVVDR----KIRLTESQVKCILLQILNGLNVLHK-WYFMHRDLSPANIFINSKG-I 157 (335)
T ss_pred Ee-----cCCcEEEEEeccccCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHh-CCeecccccHHHeEECCCC-C
Confidence 83 4446899999999887765543 4558899999999999999999998 8999999999999999888 7
Q ss_pred EEEeeecCccccCCC---------------CCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 012233 279 LKICDFGSAKMLVPG---------------EPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGE 343 (468)
Q Consensus 279 vkL~DFG~a~~~~~~---------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~ 343 (468)
++|+|||++...... .......+++.|+|||.+.+...++.++|+|||||++|+|++|.+||.+.
T Consensus 158 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~ 237 (335)
T PTZ00024 158 CKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGE 237 (335)
T ss_pred EEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 999999998765411 11123356888999999976656799999999999999999999999999
Q ss_pred CcHHHHHHHHHHhCCCCHHHHhhcC--CCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCC
Q 012233 344 SGVDQLVEIIKILGTPTREEIKCMN--PNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHP 421 (468)
Q Consensus 344 ~~~~~~~~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp 421 (468)
+..+.+..+...++.+....+.... +.+..+... ..... .......+.++.+||.+||+.||.+||+++++|.||
T Consensus 238 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~ 314 (335)
T PTZ00024 238 NEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPR--KPKDL-KTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHE 314 (335)
T ss_pred CHHHHHHHHHHHhCCCchhhCcchhhcccccccCcC--CcccH-HHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCc
Confidence 9888888888888877665443221 111111100 00000 112245688999999999999999999999999999
Q ss_pred CCCCCCCC
Q 012233 422 FFDDLRDP 429 (468)
Q Consensus 422 ~f~~~~~~ 429 (468)
||+.....
T Consensus 315 ~~~~~~~~ 322 (335)
T PTZ00024 315 YFKSDPLP 322 (335)
T ss_pred ccCCCCCC
Confidence 99875443
No 168
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=6.6e-42 Score=339.79 Aligned_cols=250 Identities=25% Similarity=0.363 Sum_probs=191.2
Q ss_pred ccceEEeceecccCceEEEEEEEc-----CCCCEEEEEEeeccc-----chHHHHHHHHHHc-CCCCcccccceeeecCC
Q 012233 136 TISYMAERVVGTGSFGVVFQAKCL-----ETGDSVAIKKVLQDK-----RYKNRELQIMRLL-NHPNVVSLKHCFFSTTE 204 (468)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~~-----~~g~~vaiK~~~~~~-----~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~ 204 (468)
.++|++.+.||+|+||.||+|.+. .++..||+|++.... ....+|+.+++.+ +||||+++++++...
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~-- 83 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKP-- 83 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCC--
Confidence 357999999999999999999752 345789999886432 2345799999999 899999999977432
Q ss_pred CCceEEEEEeecccchHHH-HHhhhhh-----------------------------------------------------
Q 012233 205 KDELYLNLVLEYISETVYR-VSKHYTR----------------------------------------------------- 230 (468)
Q Consensus 205 ~~~~~~~lv~e~~~~~ll~-~~~~~~~----------------------------------------------------- 230 (468)
...+++||||++++.+. .+.....
T Consensus 84 --~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (338)
T cd05102 84 --NGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQ 161 (338)
T ss_pred --CCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccch
Confidence 23478999999976543 3321100
Q ss_pred -----cCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCCCCC---Ccccccc
Q 012233 231 -----MNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGEP---NISYICS 302 (468)
Q Consensus 231 -----~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~~~~---~~~~~gt 302 (468)
....+++..+..++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||+++....... .....++
T Consensus 162 ~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~-~~ivHrDiKp~Nil~~~~~-~~kl~DfG~a~~~~~~~~~~~~~~~~~~ 239 (338)
T cd05102 162 ETDDLWKSPLTMEDLICYSFQVARGMEFLAS-RKCIHRDLAARNILLSENN-VVKICDFGLARDIYKDPDYVRKGSARLP 239 (338)
T ss_pred hccccccCCCCHHHHHHHHHHHHHHHHHHHH-CCEECCCCccceEEEcCCC-cEEEeecccccccccCcchhcccCCCCC
Confidence 02347788889999999999999998 8999999999999999887 799999999976533221 1233456
Q ss_pred CCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCCccCCCCcccC
Q 012233 303 RYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKA 381 (468)
Q Consensus 303 ~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (468)
+.|+|||++.+.. ++.++|||||||++|||++ |..||.+....+.+...+.... ..
T Consensus 240 ~~y~aPE~~~~~~-~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~---------------~~------- 296 (338)
T cd05102 240 LKWMAPESIFDKV-YTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGT---------------RM------- 296 (338)
T ss_pred ccccCcHHhhcCC-CCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCC---------------CC-------
Confidence 7899999997654 8999999999999999997 9999987654444333322100 00
Q ss_pred CCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 382 HPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 382 ~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
..+..+++++.+||.+||+.||.+|||+.+++.
T Consensus 297 -----~~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~ 329 (338)
T cd05102 297 -----RAPENATPEIYRIMLACWQGDPKERPTFSALVE 329 (338)
T ss_pred -----CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 022457889999999999999999999999975
No 169
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.2e-42 Score=343.29 Aligned_cols=266 Identities=28% Similarity=0.401 Sum_probs=222.1
Q ss_pred CcccceEEeceecccCceEEEEEEEcCCCCEEEEEEeecccc------hHHHHHHHHHHcCCCCcccccceeeecCCCCc
Q 012233 134 KQTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKR------YKNRELQIMRLLNHPNVVSLKHCFFSTTEKDE 207 (468)
Q Consensus 134 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~~------~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 207 (468)
.....|.+.+.||+|.|++|.+|++..++..||||.+.+... ...+|+++|+.|+|||||+++.+. ...
T Consensus 53 ~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~-----~t~ 127 (596)
T KOG0586|consen 53 NSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVI-----ETE 127 (596)
T ss_pred ccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeee-----eec
Confidence 445569999999999999999999999999999999866532 245799999999999999999998 444
Q ss_pred eEEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCc
Q 012233 208 LYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSA 287 (468)
Q Consensus 208 ~~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a 287 (468)
..+|+||||+.++.+. .+...+....+..++.++.|+++|++|||. ++|||||||++||||+.+. ++||+|||++
T Consensus 128 ~~lylV~eya~~ge~~---~yl~~~gr~~e~~ar~~F~q~vsaveYcH~-k~ivHrdLk~eNilL~~~m-nikIaDfgfS 202 (596)
T KOG0586|consen 128 ATLYLVMEYASGGELF---DYLVKHGRMKEKEARAKFRQIVSAVEYCHS-KNIVHRDLKAENILLDENM-NIKIADFGFS 202 (596)
T ss_pred ceeEEEEEeccCchhH---HHHHhcccchhhhhhhhhHHHHHHHHHHhh-cceeccccchhhccccccc-ceeeeccccc
Confidence 4599999999976433 233335556668899999999999999998 9999999999999999998 7999999999
Q ss_pred cccCCCCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhc
Q 012233 288 KMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCM 367 (468)
Q Consensus 288 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 367 (468)
..+..+....++||++.|.|||++.+....++.+|+||+|++||.|+.|..||.+.+-.+.-...+.
T Consensus 203 ~~~~~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~------------- 269 (596)
T KOG0586|consen 203 TFFDYGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLR------------- 269 (596)
T ss_pred eeecccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchhee-------------
Confidence 9999888889999999999999999988888999999999999999999999998763332221111
Q ss_pred CCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCCCCCCCCCCCCC
Q 012233 368 NPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNTCLPNGRP 438 (468)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~~~~~~~~~~~~ 438 (468)
..+. ++--++-++.++|+++|.++|.+|++.+++..|.|.........+.+...+
T Consensus 270 ----gk~r------------Ip~~ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~~~~~~~l~p~~e~ 324 (596)
T KOG0586|consen 270 ----GKYR------------IPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRNDLLEARLLAPLIER 324 (596)
T ss_pred ----eeec------------ccceeechhHHHHHHhhccCccccCCHHHhhhhcccchhhhhhhhhccccc
Confidence 1111 223378899999999999999999999999999999887666555555554
No 170
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=7.8e-42 Score=337.81 Aligned_cols=277 Identities=21% Similarity=0.358 Sum_probs=198.3
Q ss_pred Eeceeccc--CceEEEEEEEcCCCCEEEEEEeeccc------chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEE
Q 012233 141 AERVVGTG--SFGVVFQAKCLETGDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNL 212 (468)
Q Consensus 141 ~~~~lG~G--~fg~Vy~~~~~~~g~~vaiK~~~~~~------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~l 212 (468)
+.++||+| +|++||++.+..+|+.||+|.+.... ....+|+.+++.++||||++++++|. .....|+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~-----~~~~~~l 76 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFI-----ADNELWV 76 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEE-----ECCEEEE
Confidence 45789999 78999999999999999999986432 34557999999999999999999884 3345899
Q ss_pred EeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCC
Q 012233 213 VLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP 292 (468)
Q Consensus 213 v~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~ 292 (468)
||||+.++.+..+... .....+++..++.++.||+.||.|||+ +||+||||||+|||++.++ .++++||+.......
T Consensus 77 v~e~~~~~~l~~~~~~-~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~iiH~dlkp~Nil~~~~~-~~~l~~~~~~~~~~~ 153 (327)
T cd08227 77 VTSFMAYGSAKDLICT-HFMDGMSELAIAYILQGVLKALDYIHH-MGYVHRSVKASHILISVDG-KVYLSGLRSNLSMIN 153 (327)
T ss_pred EEeccCCCcHHHHHHh-hccCCCCHHHHHHHHHHHHHHHHHHHH-CCEecCCCChhhEEEecCC-cEEEcccchhhcccc
Confidence 9999997655433221 113458899999999999999999998 8999999999999999887 799999987543321
Q ss_pred CCC--------CccccccCCccccccccCC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCC----
Q 012233 293 GEP--------NISYICSRYYRAPELIFGA-TEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTP---- 359 (468)
Q Consensus 293 ~~~--------~~~~~gt~~y~aPE~~~~~-~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~---- 359 (468)
... .....++..|+|||++.+. ..++.++|||||||++|||++|..||............... ..+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~-~~~~~~~ 232 (327)
T cd08227 154 HGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNG-TVPCLLD 232 (327)
T ss_pred ccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcC-Ccccccc
Confidence 111 1123467789999998653 34889999999999999999999999876544433332211 000
Q ss_pred ----CHHHHhhcCCC-------CccCCC----CcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCC
Q 012233 360 ----TREEIKCMNPN-------YTEFKF----PQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFD 424 (468)
Q Consensus 360 ----~~~~~~~~~~~-------~~~~~~----~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~ 424 (468)
+.+.. .+.+. +..... ...........+...+++++.+||.+||+.||.+|||+.++++||||+
T Consensus 233 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~ 311 (327)
T cd08227 233 TTTIPAEEL-TMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFK 311 (327)
T ss_pred ccchhhhhc-ccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhh
Confidence 00000 00000 000000 000000001112345688999999999999999999999999999998
Q ss_pred CCC
Q 012233 425 DLR 427 (468)
Q Consensus 425 ~~~ 427 (468)
.+.
T Consensus 312 ~~~ 314 (327)
T cd08227 312 QIK 314 (327)
T ss_pred hcc
Confidence 764
No 171
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-43 Score=343.50 Aligned_cols=252 Identities=27% Similarity=0.427 Sum_probs=220.4
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeecc-------cchHHHHHHHHHHcCCCCcccccceeeecCCCCceEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD-------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYL 210 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~-------~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~ 210 (468)
+..++..||-|+||.|-++........+|+|++++. ......|.+||..++.|.||+||..| .+..|+
T Consensus 421 dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTf-----rd~kyv 495 (732)
T KOG0614|consen 421 DLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTF-----RDSKYV 495 (732)
T ss_pred hhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHh-----ccchhh
Confidence 466777899999999999988655556899987543 23344699999999999999999999 899999
Q ss_pred EEEeecccch-HHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccc
Q 012233 211 NLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (468)
Q Consensus 211 ~lv~e~~~~~-ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~ 289 (468)
|+.||-|-|| +...+ +..+.|....+++|+..++.|++|||+ +|||+|||||+|++++.+| .+||.|||+|+.
T Consensus 496 YmLmEaClGGElWTiL----rdRg~Fdd~tarF~~acv~EAfeYLH~-k~iIYRDLKPENllLd~~G-y~KLVDFGFAKk 569 (732)
T KOG0614|consen 496 YMLMEACLGGELWTIL----RDRGSFDDYTARFYVACVLEAFEYLHR-KGIIYRDLKPENLLLDNRG-YLKLVDFGFAKK 569 (732)
T ss_pred hhhHHhhcCchhhhhh----hhcCCcccchhhhhHHHHHHHHHHHHh-cCceeccCChhheeeccCC-ceEEeehhhHHH
Confidence 9999999765 44433 335778889999999999999999998 9999999999999999998 799999999999
Q ss_pred cCCCCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCC
Q 012233 290 LVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP 369 (468)
Q Consensus 290 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 369 (468)
+..+....++||||.|.|||++.+.. .+.++|.||||+++|||++|.+||.+.+++..+..|.+.+..
T Consensus 570 i~~g~KTwTFcGTpEYVAPEIILnKG-HD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~----------- 637 (732)
T KOG0614|consen 570 IGSGRKTWTFCGTPEYVAPEIILNKG-HDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDK----------- 637 (732)
T ss_pred hccCCceeeecCCcccccchhhhccC-cchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhh-----------
Confidence 99999999999999999999998765 799999999999999999999999999999999999886532
Q ss_pred CCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCC-----HHHHhCCCCCCCCCC
Q 012233 370 NYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCT-----ALEACAHPFFDDLRD 428 (468)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s-----~~ell~hp~f~~~~~ 428 (468)
+. |+..++..+.+||++++..+|.+|.. +.++..|.||..+.-
T Consensus 638 ----i~------------~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gfdw 685 (732)
T KOG0614|consen 638 ----IE------------FPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEGFDW 685 (732)
T ss_pred ----hh------------cccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhcCCh
Confidence 22 45678999999999999999999985 889999999997544
No 172
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=5.1e-42 Score=331.35 Aligned_cols=254 Identities=26% Similarity=0.446 Sum_probs=201.2
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc-----chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNL 212 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~l 212 (468)
+|++.+.||+|+||.||+|.+..+++.||+|.+.... ..+.+|+.++++++||||+++++++.. ....++
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~~~l 76 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFV-----ENRISI 76 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEE-----CCEEEE
Confidence 4788899999999999999999999999999885432 234579999999999999999998843 345789
Q ss_pred EeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCC
Q 012233 213 VLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP 292 (468)
Q Consensus 213 v~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~ 292 (468)
||||++++.+... ..+++..+..++.|++.||.|||+ .||+|+||||+|||++.++ .++|+|||++.....
T Consensus 77 v~e~~~~~~l~~~-------~~~~~~~~~~~~~qi~~~l~~lH~-~~i~H~dlkp~Nill~~~~-~~~l~dfg~~~~~~~ 147 (279)
T cd06619 77 CTEFMDGGSLDVY-------RKIPEHVLGRIAVAVVKGLTYLWS-LKILHRDVKPSNMLVNTRG-QVKLCDFGVSTQLVN 147 (279)
T ss_pred EEecCCCCChHHh-------hcCCHHHHHHHHHHHHHHHHHHHH-CCEeeCCCCHHHEEECCCC-CEEEeeCCcceeccc
Confidence 9999998866532 346788899999999999999998 8999999999999999988 799999999976533
Q ss_pred CCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHH---HHHHHHHhCCCCHHHHhhcCC
Q 012233 293 GEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQ---LVEIIKILGTPTREEIKCMNP 369 (468)
Q Consensus 293 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~ 369 (468)
. ......++..|+|||++.+.. ++.++|+|||||++|+|++|..||......+. ..........+.
T Consensus 148 ~-~~~~~~~~~~y~aPE~~~~~~-~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~--------- 216 (279)
T cd06619 148 S-IAKTYVGTNAYMAPERISGEQ-YGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDED--------- 216 (279)
T ss_pred c-cccCCCCChhhcCceeecCCC-CCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccC---------
Confidence 2 233467899999999997654 89999999999999999999999965322111 011111110000
Q ss_pred CCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCCCCC
Q 012233 370 NYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPN 430 (468)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~~~~ 430 (468)
.+. ......++++.+||.+||+.||.+||++.+++.||||......+
T Consensus 217 ------~~~--------~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~~~~~~~~~ 263 (279)
T cd06619 217 ------PPV--------LPVGQFSEKFVHFITQCMRKQPKERPAPENLMDHPFIVQYNDGN 263 (279)
T ss_pred ------CCC--------CCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCcccccccCcc
Confidence 000 01133678999999999999999999999999999998875544
No 173
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=4.7e-41 Score=334.44 Aligned_cols=311 Identities=33% Similarity=0.584 Sum_probs=232.2
Q ss_pred ccceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc------chHHHHHHHHHHcCCCCcccccceeeecCCC-Cce
Q 012233 136 TISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEK-DEL 208 (468)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~-~~~ 208 (468)
.++|.+.+.||+|+||.||+|.+..+|..||||++.... ....+|+.+|+.++||||+++++++...... ...
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 93 (343)
T cd07880 14 PDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFH 93 (343)
T ss_pred ccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccc
Confidence 346999999999999999999999999999999885421 2245799999999999999999988443221 123
Q ss_pred EEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCcc
Q 012233 209 YLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAK 288 (468)
Q Consensus 209 ~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~ 288 (468)
.+++||||+++.+..... ...+++..++.++.||+.||.|||+ .||+||||||+|||++.++ .++|+|||++.
T Consensus 94 ~~~lv~e~~~~~l~~~~~-----~~~l~~~~~~~i~~qi~~al~~LH~-~gi~H~dlkp~Nill~~~~-~~kl~dfg~~~ 166 (343)
T cd07880 94 DFYLVMPFMGTDLGKLMK-----HEKLSEDRIQFLVYQMLKGLKYIHA-AGIIHRDLKPGNLAVNEDC-ELKILDFGLAR 166 (343)
T ss_pred eEEEEEecCCCCHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEEcCCC-CEEEeeccccc
Confidence 468999999776655432 3468999999999999999999998 8999999999999999887 79999999997
Q ss_pred ccCCCCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcC
Q 012233 289 MLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMN 368 (468)
Q Consensus 289 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 368 (468)
.... ......+++.|+|||.+.+...++.++|+|||||++|+|++|.+||.+.+....+.+++.....++........
T Consensus 167 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (343)
T cd07880 167 QTDS--EMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQ 244 (343)
T ss_pred cccc--CccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhc
Confidence 6532 22345678999999998764558899999999999999999999999888888888877766655543322211
Q ss_pred CCCcc---CCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCCCCCCCCCCCCCCCccccc
Q 012233 369 PNYTE---FKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNTCLPNGRPLPTLFNF 445 (468)
Q Consensus 369 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~~~~~~~~~~~~~~~~~~~ 445 (468)
..... ...+..... ....+.+.+++++.++|.+||+.||.+|||+.+++.||||+.+.+.... +...+.+.
T Consensus 245 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~~~~~~~-~~~~~~~~---- 318 (343)
T cd07880 245 SEDAKNYVKKLPRFRKK-DFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFHDPEDE-TEAPPYDD---- 318 (343)
T ss_pred chhHHHHHHhccccCcc-hHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhhcCcccc-cCCCCccc----
Confidence 11000 000111000 0112345688999999999999999999999999999999998765433 22222222
Q ss_pred CHHHHhcCCHHHHHhcc
Q 012233 446 TAQELAGASNELRQRLI 462 (468)
Q Consensus 446 ~~~~~~~~~~~~~~~~~ 462 (468)
+-+..+..=|.|+|+.
T Consensus 319 -~~~~~~~~~~~~~~~~ 334 (343)
T cd07880 319 -SFDEVDQSLEEWKRLT 334 (343)
T ss_pred -cHHhhccchHHHHHHH
Confidence 2344555666677764
No 174
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=2.9e-41 Score=326.19 Aligned_cols=275 Identities=38% Similarity=0.683 Sum_probs=220.1
Q ss_pred eEEeceecccCceEEEEEEEcCCCCEEEEEEeecccc-----hHHHHHHHHHHcC-CCCcccccceeeecCCCCceEEEE
Q 012233 139 YMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKR-----YKNRELQIMRLLN-HPNVVSLKHCFFSTTEKDELYLNL 212 (468)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~~-----~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~~~~~~l 212 (468)
|.+.+.||+|+||.||+|.+..+++.|+||.+..... ...+|+..++.+. |+||+++++++. +....++
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~-----~~~~~~l 75 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFR-----ENDELYF 75 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhh-----cCCcEEE
Confidence 6788899999999999999988999999998754321 2346889999999 999999999983 3456889
Q ss_pred EeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCC
Q 012233 213 VLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP 292 (468)
Q Consensus 213 v~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~ 292 (468)
||||+.+.++..+.... ...+++..+..++.|++.+|.|||+ +|++|+||+|+||+++.++ .++|+|||.+.....
T Consensus 76 v~e~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~Lh~-~~i~H~dl~~~ni~i~~~~-~~~l~d~~~~~~~~~ 151 (283)
T cd07830 76 VFEYMEGNLYQLMKDRK--GKPFSESVIRSIIYQILQGLAHIHK-HGFFHRDLKPENLLVSGPE-VVKIADFGLAREIRS 151 (283)
T ss_pred EEecCCCCHHHHHHhcc--cccCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCChhhEEEcCCC-CEEEeecccceeccC
Confidence 99999877776544321 3468999999999999999999998 8999999999999999887 799999999987655
Q ss_pred CCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCCc
Q 012233 293 GEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYT 372 (468)
Q Consensus 293 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 372 (468)
........++..|+|||++.+...++.++|+||||+++|+|++|++||...+..+.+.++...++.+....+........
T Consensus 152 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (283)
T cd07830 152 RPPYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLAS 231 (283)
T ss_pred CCCcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhc
Confidence 44445567889999999986666689999999999999999999999999999999999988888877654432211111
Q ss_pred --cCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCC
Q 012233 373 --EFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (468)
Q Consensus 373 --~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f 423 (468)
...++....... ..+.+..+.++.+||.+||+.||.+|||+.|++.||||
T Consensus 232 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~~ 283 (283)
T cd07830 232 KLGFRFPQFAPTSL-HQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF 283 (283)
T ss_pred cccccccccccccH-HHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhCCCC
Confidence 112221111111 11223347899999999999999999999999999998
No 175
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-42 Score=355.80 Aligned_cols=255 Identities=25% Similarity=0.432 Sum_probs=203.0
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc----chHHHHHHHHHHcC-CCCcccccc-eeeecCCCC-ceEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK----RYKNRELQIMRLLN-HPNVVSLKH-CFFSTTEKD-ELYL 210 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~----~~~~~E~~il~~l~-hpnIv~l~~-~~~~~~~~~-~~~~ 210 (468)
+++++++|.+|||+.||+|.+...|..||+|++.... ....+|+.+|++|. |+|||.+++ ......... ...+
T Consensus 38 ~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~Ev 117 (738)
T KOG1989|consen 38 RVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEV 117 (738)
T ss_pred EEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEE
Confidence 5899999999999999999998888999999875432 34468999999997 999999999 444443333 4567
Q ss_pred EEEeeccc-chHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCC--ccccCCCCCCeeecCCCCcEEEeeecCc
Q 012233 211 NLVLEYIS-ETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVG--VCHRDIKPQNLLVNPHTHQLKICDFGSA 287 (468)
Q Consensus 211 ~lv~e~~~-~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~g--ivHrDlkp~NILl~~~~~~vkL~DFG~a 287 (468)
+|.||||. |++.+++..+. ...|.+.++.+|++|+|+|+.+||. .. |||||||-|||||+.++ ..||||||.+
T Consensus 118 llLmEyC~gg~Lvd~mn~Rl--q~~lte~eVLkIf~dv~~AVa~mH~-~~pPiIHRDLKiENvLls~~g-~~KLCDFGSa 193 (738)
T KOG1989|consen 118 LLLMEYCKGGSLVDFMNTRL--QTRLTEDEVLKIFYDVCEAVAAMHY-LKPPIIHRDLKIENVLLSADG-NYKLCDFGSA 193 (738)
T ss_pred EeehhhccCCcHHHHHHHHH--hccCChHHHHHHHHHHHHHHHHHhc-CCCccchhhhhhhheEEcCCC-CEEeCccccc
Confidence 89999999 68888776544 4459999999999999999999997 66 99999999999999998 7999999998
Q ss_pred cccCCCCC----------CccccccCCcccccccc--CCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHH
Q 012233 288 KMLVPGEP----------NISYICSRYYRAPELIF--GATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKI 355 (468)
Q Consensus 288 ~~~~~~~~----------~~~~~gt~~y~aPE~~~--~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~ 355 (468)
+-...... .....-|+.|+|||++. .....++|+|||+|||+||-|+...+||....... |+.
T Consensus 194 tt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~la----Iln- 268 (738)
T KOG1989|consen 194 TTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLA----ILN- 268 (738)
T ss_pred ccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCccee----EEe-
Confidence 65422221 11234589999999983 33448999999999999999999999997653222 111
Q ss_pred hCCCCHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC--------CCCCCCCC
Q 012233 356 LGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA--------HPFFDDLR 427 (468)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~--------hp~f~~~~ 427 (468)
..+.||.. +.++..+++||..||+.||.+||++.|++. ++|+.++.
T Consensus 269 ----------------g~Y~~P~~----------p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~~~~~~~~ 322 (738)
T KOG1989|consen 269 ----------------GNYSFPPF----------PNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKPCPIPDIY 322 (738)
T ss_pred ----------------ccccCCCC----------ccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCCCCccccc
Confidence 23444431 458899999999999999999999998774 56666655
No 176
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-43 Score=342.31 Aligned_cols=250 Identities=30% Similarity=0.558 Sum_probs=212.2
Q ss_pred eEE--eceecccCceEEEEEEEcCCCCEEEEEEeec------ccchHHHHHHHHHHcCCCCcccccceeeecCCCCceEE
Q 012233 139 YMA--ERVVGTGSFGVVFQAKCLETGDSVAIKKVLQ------DKRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYL 210 (468)
Q Consensus 139 y~~--~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~------~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~ 210 (468)
|++ .++||+|.||+||-|+.+.+|+.||||+|.+ .+...++|+.||+.+.||.||.+.-.| +....+
T Consensus 564 YQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~-----ET~erv 638 (888)
T KOG4236|consen 564 YQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMF-----ETPERV 638 (888)
T ss_pred HHhhhHhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEee-----cCCceE
Confidence 544 3789999999999999999999999999843 345667899999999999999997666 334458
Q ss_pred EEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCC--CcEEEeeecCcc
Q 012233 211 NLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHT--HQLKICDFGSAK 288 (468)
Q Consensus 211 ~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~--~~vkL~DFG~a~ 288 (468)
|+|||-+.|+.++.+.... ...+++...+.++.||+.||.|||. ++|+|+||||+|||+.... -++||||||+|+
T Consensus 639 FVVMEKl~GDMLEMILSsE--kgRL~er~TkFlvtQIL~ALr~LH~-knIvHCDLKPENVLLas~~~FPQvKlCDFGfAR 715 (888)
T KOG4236|consen 639 FVVMEKLHGDMLEMILSSE--KGRLPERITKFLVTQILVALRYLHF-KNIVHCDLKPENVLLASASPFPQVKLCDFGFAR 715 (888)
T ss_pred EEEehhhcchHHHHHHHhh--cccchHHHHHHHHHHHHHHHHHhhh-cceeeccCCchheeeccCCCCCceeecccccee
Confidence 9999999999998877654 5779999999999999999999997 9999999999999996542 379999999999
Q ss_pred ccCCCCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCC-cHHHHHHHHHHhCCCCHHHHhhc
Q 012233 289 MLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGES-GVDQLVEIIKILGTPTREEIKCM 367 (468)
Q Consensus 289 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~-~~~~~~~i~~~~~~~~~~~~~~~ 367 (468)
.+.......+.+|||.|+|||++... .|+...|+||.|||+|--|.|..||.... ..+++++
T Consensus 716 iIgEksFRrsVVGTPAYLaPEVLrnk-GyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQN---------------- 778 (888)
T KOG4236|consen 716 IIGEKSFRRSVVGTPAYLAPEVLRNK-GYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQN---------------- 778 (888)
T ss_pred ecchhhhhhhhcCCccccCHHHHhhc-cccccccceeeeEEEEEEecccccCCCccchhHHhhc----------------
Confidence 99877777889999999999999755 59999999999999999999999996432 2233332
Q ss_pred CCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCC
Q 012233 368 NPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDD 425 (468)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~ 425 (468)
..|.+| ..|| +.+++++.|||..+|+..-++|.|.+..|.|||+++
T Consensus 779 ----AaFMyP---p~PW-----~eis~~AidlIn~LLqVkm~kRysvdk~lsh~Wlq~ 824 (888)
T KOG4236|consen 779 ----AAFMYP---PNPW-----SEISPEAIDLINNLLQVKMRKRYSVDKSLSHPWLQD 824 (888)
T ss_pred ----cccccC---CCch-----hhcCHHHHHHHHHHHHHHHHHhcchHhhccchhhhc
Confidence 233333 3444 458999999999999999999999999999999987
No 177
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=2e-41 Score=327.56 Aligned_cols=277 Identities=33% Similarity=0.602 Sum_probs=216.7
Q ss_pred eEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc------chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEE
Q 012233 139 YMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNL 212 (468)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~l 212 (468)
|.+.+.||.|+||.||+|.+..+|+.+|+|.+.... ....+|+.+++.++|+|++++++++.... ....++
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~---~~~~~l 77 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKG---KGSIYM 77 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCC---CCcEEE
Confidence 678899999999999999999999999999986542 23457999999999999999999884321 246889
Q ss_pred EeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCC
Q 012233 213 VLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP 292 (468)
Q Consensus 213 v~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~ 292 (468)
||||+++++...+.. ....+++..++.++.||+.||+|||+ .|++|+||||+|||++.++ .++|+|||++.....
T Consensus 78 v~e~~~~~l~~~~~~---~~~~~~~~~~~~i~~~i~~al~~LH~-~~~~h~dl~p~nil~~~~~-~~~l~d~g~~~~~~~ 152 (287)
T cd07840 78 VFEYMDHDLTGLLDS---PEVKFTESQIKCYMKQLLEGLQYLHS-NGILHRDIKGSNILINNDG-VLKLADFGLARPYTK 152 (287)
T ss_pred EeccccccHHHHHhc---cCCCCCHHHHHHHHHHHHHHHHHHHH-CCceeccCcHHHeEEcCCC-CEEEccccceeeccC
Confidence 999999876665432 22568999999999999999999998 8999999999999999888 799999999976644
Q ss_pred CC--CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCC
Q 012233 293 GE--PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPN 370 (468)
Q Consensus 293 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 370 (468)
.. ......++..|+|||.+.+...++.++|||||||++|+|++|+.||...+..+.+..+....+.+....+......
T Consensus 153 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (287)
T cd07840 153 RNSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKL 232 (287)
T ss_pred CCcccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccc
Confidence 32 1233466888999998876656899999999999999999999999998888888888887777665544322111
Q ss_pred --CccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCC
Q 012233 371 --YTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (468)
Q Consensus 371 --~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f 423 (468)
+................+...+++++.++|.+||+.||.+||++.+++.||||
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~ 287 (287)
T cd07840 233 PWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF 287 (287)
T ss_pred hhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence 00000000000001112222348999999999999999999999999999998
No 178
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=4e-41 Score=326.94 Aligned_cols=261 Identities=24% Similarity=0.345 Sum_probs=206.4
Q ss_pred ccceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc---chHHHHHHHHHHc-CCCCcccccceeeecCCCCceEEE
Q 012233 136 TISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK---RYKNRELQIMRLL-NHPNVVSLKHCFFSTTEKDELYLN 211 (468)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~---~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~~~~~~ 211 (468)
.++|.+.+.||+|+||.||+|.+..+++.+|+|.+.... ....+|+.+++.+ +||||+++++++...........+
T Consensus 21 ~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~~ 100 (291)
T cd06639 21 TDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLW 100 (291)
T ss_pred CCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCeeE
Confidence 456999999999999999999999999999999885432 3345789999998 799999999998655433445688
Q ss_pred EEeecccchHHH-HHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCcccc
Q 012233 212 LVLEYISETVYR-VSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (468)
Q Consensus 212 lv~e~~~~~ll~-~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~ 290 (468)
+||||+.++.+. ++.........+++..++.++.|++.||.|||+ .||+|+||||+||+++.++ .+||+|||++...
T Consensus 101 lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~-~~ivH~dlkp~nili~~~~-~~kl~dfg~~~~~ 178 (291)
T cd06639 101 LVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHN-NRIIHRDVKGNNILLTTEG-GVKLVDFGVSAQL 178 (291)
T ss_pred EEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh-CCeeccCCCHHHEEEcCCC-CEEEeecccchhc
Confidence 999999875554 333333345668999999999999999999998 8999999999999999887 7999999998765
Q ss_pred CCCC-CCccccccCCccccccccCCC----CCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHh
Q 012233 291 VPGE-PNISYICSRYYRAPELIFGAT----EYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIK 365 (468)
Q Consensus 291 ~~~~-~~~~~~gt~~y~aPE~~~~~~----~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 365 (468)
.... ......|+..|+|||++.... .++.++|||||||++|+|++|+.||........+..+.+. +.
T Consensus 179 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~---~~----- 250 (291)
T cd06639 179 TSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRN---PP----- 250 (291)
T ss_pred ccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcC---CC-----
Confidence 4322 223456789999999985432 2678999999999999999999999876655544443221 00
Q ss_pred hcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCC
Q 012233 366 CMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFD 424 (468)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~ 424 (468)
... ..+..++..+.+||.+||+.||.+||++.++++||||+
T Consensus 251 ------~~~------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~ 291 (291)
T cd06639 251 ------PTL------------LHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFIK 291 (291)
T ss_pred ------CCC------------CcccccCHHHHHHHHHHhhcChhhCcCHHHHhcCcccC
Confidence 000 01234677899999999999999999999999999995
No 179
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-42 Score=340.39 Aligned_cols=249 Identities=19% Similarity=0.271 Sum_probs=198.4
Q ss_pred CcccceEEeceecccCceEEEEEEEcCCCCEEEEEEeecc------cchHHHHHHHHHHcCCCCcccccceeeecCCCCc
Q 012233 134 KQTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDE 207 (468)
Q Consensus 134 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~------~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 207 (468)
.......+...||+|.||+||+|+| ...||||++..+ ...+++|+.++++-+|.||+-+.|++ ...
T Consensus 389 Ip~~ev~l~~rIGsGsFGtV~Rg~w---hGdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~-----~~p 460 (678)
T KOG0193|consen 389 IPPEEVLLGERIGSGSFGTVYRGRW---HGDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGAC-----MNP 460 (678)
T ss_pred cCHHHhhccceeccccccceeeccc---ccceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhh-----cCC
Confidence 3334567889999999999999998 346999998543 34567899999999999999999998 444
Q ss_pred eEEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCc
Q 012233 208 LYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSA 287 (468)
Q Consensus 208 ~~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a 287 (468)
.+ .||+-+|.|..|....+.. ..+|.+...+.|+.||+.|+.|||. ++|||||||..|||+.+++ +|||+|||++
T Consensus 461 ~~-AIiTqwCeGsSLY~hlHv~--etkfdm~~~idIAqQiaqGM~YLHA-K~IIHrDLKSnNIFl~~~~-kVkIgDFGLa 535 (678)
T KOG0193|consen 461 PL-AIITQWCEGSSLYTHLHVQ--ETKFDMNTTIDIAQQIAQGMDYLHA-KNIIHRDLKSNNIFLHEDL-KVKIGDFGLA 535 (678)
T ss_pred ce-eeeehhccCchhhhhccch--hhhhhHHHHHHHHHHHHHhhhhhhh-hhhhhhhccccceEEccCC-cEEEecccce
Confidence 44 7999999998766555544 3678999999999999999999996 9999999999999999887 8999999998
Q ss_pred cccC---CCCCCccccccCCccccccccCC--CCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHH
Q 012233 288 KMLV---PGEPNISYICSRYYRAPELIFGA--TEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTRE 362 (468)
Q Consensus 288 ~~~~---~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~ 362 (468)
.... .+.......|...|||||++... ..|++.+|||||||++|||++|..||......+.+..+-+.+..|...
T Consensus 536 tvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l~pd~s 615 (678)
T KOG0193|consen 536 TVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYLMPDLS 615 (678)
T ss_pred eeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEecccccCccch
Confidence 6442 12223345678899999999633 248999999999999999999999999555544455544433233221
Q ss_pred HHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 363 EIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
. ...+.+.++++|+..||.+++++||.+.+||.
T Consensus 616 ~------------------------~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~ 648 (678)
T KOG0193|consen 616 K------------------------IRSNCPKAMKRLLSDCWKFDREERPLFPQLLS 648 (678)
T ss_pred h------------------------hhccCHHHHHHHHHHHHhcCcccCccHHHHHH
Confidence 1 22457789999999999999999999999876
No 180
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-42 Score=346.37 Aligned_cols=258 Identities=27% Similarity=0.436 Sum_probs=207.9
Q ss_pred eecccCceEEEEEEEcCCCCEEEEEEeeccc----chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEEEeecccc
Q 012233 144 VVGTGSFGVVFQAKCLETGDSVAIKKVLQDK----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVLEYISE 219 (468)
Q Consensus 144 ~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv~e~~~~ 219 (468)
+||+|.||+||.|++..+...+|||.+.... .-+.+|+.+-+.|+|.|||++++++ ..+.++-|.||-++|
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~-----senGf~kIFMEqVPG 656 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSV-----SENGFFKIFMEQVPG 656 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhcc-----CCCCeEEEEeecCCC
Confidence 6999999999999999999999999885433 3356899999999999999999997 444578899999998
Q ss_pred hHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCCCCCC-cc
Q 012233 220 TVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGEPN-IS 298 (468)
Q Consensus 220 ~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~~~~~-~~ 298 (468)
|.+..+.......-+-.+.....|..||+.||.|||+ +.|||||||-+||||+...+.+||+|||.++.+..-.+. -+
T Consensus 657 GSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHe-n~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TET 735 (1226)
T KOG4279|consen 657 GSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHE-NKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTET 735 (1226)
T ss_pred CcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhh-cceeeccccCCcEEEeeccceEEecccccchhhccCCccccc
Confidence 8776555433322223678889999999999999998 899999999999999987778999999999988655443 46
Q ss_pred ccccCCccccccccC-CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCCccCCCC
Q 012233 299 YICSRYYRAPELIFG-ATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFP 377 (468)
Q Consensus 299 ~~gt~~y~aPE~~~~-~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (468)
+.||..|||||++.. ..+|+.++|||||||++.||.||++||......+ ..+++..
T Consensus 736 FTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elgspq--AAMFkVG--------------------- 792 (1226)
T KOG4279|consen 736 FTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQ--AAMFKVG--------------------- 792 (1226)
T ss_pred cccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChh--Hhhhhhc---------------------
Confidence 889999999999953 3469999999999999999999999997543222 1122211
Q ss_pred cccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCC-CCCCCCC
Q 012233 378 QIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDL-RDPNTCL 433 (468)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~-~~~~~~~ 433 (468)
....+..++..++.+++.||.+|+..||.+||+|.++|..||++.- +++.+.+
T Consensus 793 ---myKvHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~DpFlq~~~kk~r~~l 846 (1226)
T KOG4279|consen 793 ---MYKVHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQDPFLQHNNKKPRPKL 846 (1226)
T ss_pred ---ceecCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhccCcccccCCCCCCCCC
Confidence 1112233567788999999999999999999999999999999975 3343333
No 181
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=2.1e-41 Score=325.28 Aligned_cols=257 Identities=24% Similarity=0.364 Sum_probs=201.2
Q ss_pred cceEEeceecccCceEEEEEEEcCCCCEEEEEEeecc---cchHHHHHHHHHHc-CCCCcccccceeeecCCC-CceEEE
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD---KRYKNRELQIMRLL-NHPNVVSLKHCFFSTTEK-DELYLN 211 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~---~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~-~~~~~~ 211 (468)
+.|.+.+.||+|+||.||+|.+..+++.||+|.+... .....+|+.+++.+ +|+||++++++|...... ....+|
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~ 85 (272)
T cd06637 6 GIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLW 85 (272)
T ss_pred hhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEE
Confidence 3589999999999999999999999999999988543 23456788999988 699999999988654321 234688
Q ss_pred EEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccC
Q 012233 212 LVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (468)
Q Consensus 212 lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~ 291 (468)
+||||++++.+...... .....+++..+..++.|++.||+|||+ +||+|+||||+||+++.++ .++|+|||++....
T Consensus 86 iv~e~~~~~~L~~~l~~-~~~~~l~~~~~~~~~~qi~~~l~~LH~-~~ivh~dl~~~nili~~~~-~~~l~Dfg~~~~~~ 162 (272)
T cd06637 86 LVMEFCGAGSVTDLIKN-TKGNTLKEEWIAYICREILRGLSHLHQ-HKVIHRDIKGQNVLLTENA-EVKLVDFGVSAQLD 162 (272)
T ss_pred EEEEcCCCCcHHHHHHh-ccCCCCCHHHHHHHHHHHHHHHHHHHH-CCCccCCCCHHHEEECCCC-CEEEccCCCceecc
Confidence 99999997554433221 123568899999999999999999998 8999999999999999888 79999999987653
Q ss_pred CC-CCCccccccCCccccccccCC----CCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhh
Q 012233 292 PG-EPNISYICSRYYRAPELIFGA----TEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKC 366 (468)
Q Consensus 292 ~~-~~~~~~~gt~~y~aPE~~~~~----~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 366 (468)
.. .......|++.|+|||++.+. ..++.++|||||||++|||++|..||...........+... +
T Consensus 163 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~~---~------- 232 (272)
T cd06637 163 RTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRN---P------- 232 (272)
T ss_pred cccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcC---C-------
Confidence 32 223346789999999998532 24788999999999999999999999765543333222110 0
Q ss_pred cCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCC
Q 012233 367 MNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (468)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f 423 (468)
........++.++.+||.+||..||.+|||+.+++.||||
T Consensus 233 -----------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~ 272 (272)
T cd06637 233 -----------------APRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI 272 (272)
T ss_pred -----------------CCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence 0001123467899999999999999999999999999998
No 182
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=4.6e-41 Score=328.03 Aligned_cols=282 Identities=33% Similarity=0.542 Sum_probs=218.6
Q ss_pred ccceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc------chHHHHHHHHHHcCCCCcccccceeeecCC-----
Q 012233 136 TISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTE----- 204 (468)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~----- 204 (468)
..+|.+.+.||+|+||.||+|.+..+|+.||+|.+.... ....+|+.+++.++||||+++++++....+
T Consensus 6 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~ 85 (302)
T cd07864 6 VDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDFK 85 (302)
T ss_pred hhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhcc
Confidence 346999999999999999999999999999999885432 234579999999999999999998754331
Q ss_pred CCceEEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeee
Q 012233 205 KDELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDF 284 (468)
Q Consensus 205 ~~~~~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DF 284 (468)
.+..++++||||++++++..+.. ....+++..++.++.||+.||.|||+ .||+|+||||+||+++.++ .+||+||
T Consensus 86 ~~~~~~~lv~e~~~~~l~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~-~~i~H~dl~p~nili~~~~-~~kl~df 160 (302)
T cd07864 86 KDKGAFYLVFEYMDHDLMGLLES---GLVHFSEDHIKSFMKQLLEGLNYCHK-KNFLHRDIKCSNILLNNKG-QIKLADF 160 (302)
T ss_pred ccCCcEEEEEcccCccHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEECCCC-cEEeCcc
Confidence 12236899999999877665432 23468999999999999999999998 8999999999999999887 7999999
Q ss_pred cCccccCCCC--CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHH
Q 012233 285 GSAKMLVPGE--PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTRE 362 (468)
Q Consensus 285 G~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~ 362 (468)
|++....... ......++..|+|||.+.+...++.++|||||||++|+|++|++||...+..+.+..+....+.+...
T Consensus 161 g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (302)
T cd07864 161 GLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPA 240 (302)
T ss_pred cccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChh
Confidence 9997654332 12233567889999998665557899999999999999999999999888888888888877776654
Q ss_pred HHhhcC--CCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCC
Q 012233 363 EIKCMN--PNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (468)
Q Consensus 363 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f 423 (468)
.+.... +.+............+ ......++..+.+||.+||+.||.+||++.+++.||||
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 302 (302)
T cd07864 241 VWPDVIKLPYFNTMKPKKQYRRRL-REEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPWL 302 (302)
T ss_pred hcccccccccccccccccccccch-hhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcCCCC
Confidence 433211 1111111000000111 11223578999999999999999999999999999997
No 183
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=4.7e-41 Score=324.28 Aligned_cols=274 Identities=38% Similarity=0.679 Sum_probs=223.9
Q ss_pred eEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc------chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEE
Q 012233 139 YMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNL 212 (468)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~l 212 (468)
|.+.+.||+|+||.||+|.+..+++.||+|.+.... .....|+.+++.++|+||+++++++. +..+.++
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-----~~~~~~~ 75 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIH-----TERKLYL 75 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhh-----cCCceEE
Confidence 567788999999999999999999999999886532 23356999999999999999999883 4456899
Q ss_pred EeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCC
Q 012233 213 VLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP 292 (468)
Q Consensus 213 v~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~ 292 (468)
||||+++++...+... ...+++..+..++.|++.||.|||+ .||+|+||+|+||+++.++ .++|+|||.+.....
T Consensus 76 v~e~~~~~l~~~i~~~---~~~~~~~~~~~~~~~i~~~l~~LH~-~~i~H~~l~~~ni~~~~~~-~~~l~d~g~~~~~~~ 150 (282)
T cd07829 76 VFEYCDMDLKKYLDKR---PGPLSPNLIKSIMYQLLRGLAYCHS-HRILHRDLKPQNILINRDG-VLKLADFGLARAFGI 150 (282)
T ss_pred EecCcCcCHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCChheEEEcCCC-CEEEecCCcccccCC
Confidence 9999998776655432 2468999999999999999999998 8999999999999999887 799999999876543
Q ss_pred CC-CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCC
Q 012233 293 GE-PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNY 371 (468)
Q Consensus 293 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 371 (468)
.. ......++..|+|||.+.+...++.++|||||||++|||++|.+||.+.+..+.+.++...++.+....+..+....
T Consensus 151 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (282)
T cd07829 151 PLRTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLP 230 (282)
T ss_pred CccccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccc
Confidence 32 22344567889999998766568999999999999999999999999999889999999988888887765543321
Q ss_pred -ccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCC
Q 012233 372 -TEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (468)
Q Consensus 372 -~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f 423 (468)
....++..........+ +.++..+.++|.+||+.||.+||++.+++.||||
T Consensus 231 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~ 282 (282)
T cd07829 231 DYKPTFPKFPPKDLEKVL-PRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF 282 (282)
T ss_pred cccccccccCccchHHhc-ccccHHHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence 23334443333333333 3458899999999999999999999999999998
No 184
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=3.6e-41 Score=330.21 Aligned_cols=279 Identities=24% Similarity=0.365 Sum_probs=202.7
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc-----chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNL 212 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~l 212 (468)
+|++.+.||+|+||.||++.+..++..+|+|.+.... ....+|+++++.++||||++++++|. +..++|+
T Consensus 2 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~~l 76 (308)
T cd06615 2 DFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFY-----SDGEISI 76 (308)
T ss_pred CceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-----eCCEEEE
Confidence 5999999999999999999999999999999875431 23457999999999999999999984 4446899
Q ss_pred EeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCC
Q 012233 213 VLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP 292 (468)
Q Consensus 213 v~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~ 292 (468)
||||++++.+..... ....+++..+..++.||+.||.|||+..+|+|+||||+|||++.++ .+||+|||++.....
T Consensus 77 v~ey~~~~~L~~~l~---~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~-~~~l~dfg~~~~~~~ 152 (308)
T cd06615 77 CMEHMDGGSLDQVLK---KAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRG-EIKLCDFGVSGQLID 152 (308)
T ss_pred EeeccCCCcHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCC-cEEEccCCCcccccc
Confidence 999998765543222 2356889999999999999999999635999999999999999887 799999999875533
Q ss_pred CCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCCc
Q 012233 293 GEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYT 372 (468)
Q Consensus 293 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 372 (468)
. ......+++.|+|||++.+. .++.++|+|||||++|+|++|+.||...+... ...++...................
T Consensus 153 ~-~~~~~~~~~~~~aPE~~~~~-~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 229 (308)
T cd06615 153 S-MANSFVGTRSYMSPERLQGT-HYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKE-LEAMFGRPVSEGEAKESHRPVSGH 229 (308)
T ss_pred c-ccccCCCCcCccChhHhcCC-CCCccchHHHHHHHHHHHHhCCCCCCCcchhh-HHHhhcCccccccccCCcccccCC
Confidence 2 23356789999999998654 48899999999999999999999997665332 222221110000000000000000
Q ss_pred cCCCCc----------ccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCCC
Q 012233 373 EFKFPQ----------IKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRD 428 (468)
Q Consensus 373 ~~~~~~----------~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~~ 428 (468)
....+. +........-...++.++++||.+||..||++|||+.+++.||||.....
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~ 295 (308)
T cd06615 230 PPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKRAEL 295 (308)
T ss_pred CCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhhccc
Confidence 000000 00000000001236788999999999999999999999999999987533
No 185
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=1e-40 Score=317.69 Aligned_cols=249 Identities=27% Similarity=0.431 Sum_probs=200.6
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc------chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~ 211 (468)
.|++.+.||.|+||.||++.+..+++.||+|.+.... ....+|+.+++.++|+|++++++.+. ....++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~----~~~~~~~ 76 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWE----GEDGLLY 76 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeec----CCCCEEE
Confidence 3899999999999999999999999999999885432 23457899999999999999988762 2234688
Q ss_pred EEeecccchHH-HHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCcccc
Q 012233 212 LVLEYISETVY-RVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (468)
Q Consensus 212 lv~e~~~~~ll-~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~ 290 (468)
+||||++++.+ +.+.. .....+++..++.++.|++.||.|||+ .||+|+||||+||+++.++ .++|+|||++...
T Consensus 77 lv~e~~~~~~l~~~l~~--~~~~~l~~~~~~~~~~~l~~~l~~lH~-~~i~H~di~p~nil~~~~~-~~~l~df~~~~~~ 152 (257)
T cd08223 77 IVMGFCEGGDLYHKLKE--QKGKLLPENQVVEWFVQIAMALQYLHE-KHILHRDLKTQNVFLTRTN-IIKVGDLGIARVL 152 (257)
T ss_pred EEecccCCCcHHHHHHH--hcCCCCCHHHHHHHHHHHHHHHHHHHh-CCeeccCCCchhEEEecCC-cEEEecccceEEe
Confidence 99999986544 33332 123458999999999999999999998 8999999999999999887 7999999999766
Q ss_pred CCCC-CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCC
Q 012233 291 VPGE-PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP 369 (468)
Q Consensus 291 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 369 (468)
.... ......+++.|+|||++.+. .++.++|+|||||++|+|++|+.||...+.......+....
T Consensus 153 ~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~------------- 218 (257)
T cd08223 153 ENQCDMASTLIGTPYYMSPELFSNK-PYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGK------------- 218 (257)
T ss_pred cccCCccccccCCcCccChhHhcCC-CCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcC-------------
Confidence 3322 22345688999999998655 48899999999999999999999998766544444333210
Q ss_pred CCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCC
Q 012233 370 NYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (468)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f 423 (468)
.+ .++..+++.+.+||.+||+.||.+||++.+++.||||
T Consensus 219 ------~~---------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 257 (257)
T cd08223 219 ------LP---------PMPKDYSPELGELIATMLSKRPEKRPSVKSILRQPYI 257 (257)
T ss_pred ------CC---------CCccccCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 00 0223478899999999999999999999999999998
No 186
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=4.9e-41 Score=321.36 Aligned_cols=256 Identities=29% Similarity=0.400 Sum_probs=205.0
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc-----chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNL 212 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~l 212 (468)
+|.+.+.||.|+||+||+|.+..++..+|+|++.... ....+|+.+++.++|+||+++++.+ ......++
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~i 76 (267)
T cd06610 2 DYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSF-----VVGDELWL 76 (267)
T ss_pred cceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEE-----eeCCEEEE
Confidence 5999999999999999999998899999999885432 3456799999999999999999887 33446889
Q ss_pred EeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCC
Q 012233 213 VLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP 292 (468)
Q Consensus 213 v~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~ 292 (468)
|||++.++.+............+++..++.++.||+.||.|||+ .||+|+||||+||+++.++ .++|+|||++.....
T Consensus 77 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~-~~i~h~~l~p~ni~~~~~~-~~~l~df~~~~~~~~ 154 (267)
T cd06610 77 VMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHS-NGQIHRDIKAGNILLGEDG-SVKIADFGVSASLAD 154 (267)
T ss_pred EEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHhEEEcCCC-CEEEcccchHHHhcc
Confidence 99999876554333222223568899999999999999999998 8999999999999999887 799999999876644
Q ss_pred CCC-----CccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhc
Q 012233 293 GEP-----NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCM 367 (468)
Q Consensus 293 ~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 367 (468)
... .....|+..|+|||++.....++.++|+|||||++|+|++|+.||...+....+.++... .+
T Consensus 155 ~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~---~~------- 224 (267)
T cd06610 155 GGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQN---DP------- 224 (267)
T ss_pred CccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcC---CC-------
Confidence 322 234568899999999876645899999999999999999999999877665555444331 00
Q ss_pred CCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCC
Q 012233 368 NPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (468)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f 423 (468)
+ .++. ......+++.+.+||.+||..||.+||++.+++.||||
T Consensus 225 -~-----~~~~-------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~ 267 (267)
T cd06610 225 -P-----SLET-------GADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKHKFF 267 (267)
T ss_pred -C-----CcCC-------ccccccccHHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence 0 0000 00123578899999999999999999999999999998
No 187
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=7.1e-41 Score=324.14 Aligned_cols=261 Identities=23% Similarity=0.332 Sum_probs=205.3
Q ss_pred cccceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc---chHHHHHHHHHHc-CCCCcccccceeeecCCCCceEE
Q 012233 135 QTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK---RYKNRELQIMRLL-NHPNVVSLKHCFFSTTEKDELYL 210 (468)
Q Consensus 135 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~---~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~~~~~ 210 (468)
..++|.+.+.||+|+||.||+|.+..+++.+|+|++.... ....+|+.+++.+ +||||+++++++......+..+.
T Consensus 16 ~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~ 95 (286)
T cd06638 16 PSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQL 95 (286)
T ss_pred cccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCeE
Confidence 4457999999999999999999999999999999875422 3455799999999 69999999998865544455678
Q ss_pred EEEeecccchHHH-HHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccc
Q 012233 211 NLVLEYISETVYR-VSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (468)
Q Consensus 211 ~lv~e~~~~~ll~-~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~ 289 (468)
++||||++++.+. .+.........+++..++.++.|++.||.|||+ .+|+||||||+||+++.++ .++|+|||++..
T Consensus 96 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dlkp~nili~~~~-~~kl~dfg~~~~ 173 (286)
T cd06638 96 WLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHV-NKTIHRDVKGNNILLTTEG-GVKLVDFGVSAQ 173 (286)
T ss_pred EEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHh-CCccccCCCHHhEEECCCC-CEEEccCCceee
Confidence 9999999876554 333333344668889999999999999999998 8999999999999999888 699999999876
Q ss_pred cCCCC-CCccccccCCccccccccCC----CCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHH
Q 012233 290 LVPGE-PNISYICSRYYRAPELIFGA----TEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEI 364 (468)
Q Consensus 290 ~~~~~-~~~~~~gt~~y~aPE~~~~~----~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 364 (468)
..... ......|++.|+|||++... ..++.++|||||||++|+|++|..||........+..+... .+
T Consensus 174 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~--~~----- 246 (286)
T cd06638 174 LTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRN--PP----- 246 (286)
T ss_pred cccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhcccc--CC-----
Confidence 54322 22345689999999987432 33788999999999999999999999876544433222110 00
Q ss_pred hhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCC
Q 012233 365 KCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (468)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f 423 (468)
.. ...+..++.++.+||.+||+.||.+|||+.++++|+||
T Consensus 247 -------~~------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~~ 286 (286)
T cd06638 247 -------PT------------LHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI 286 (286)
T ss_pred -------Cc------------ccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence 00 00122357789999999999999999999999999997
No 188
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=5.9e-41 Score=326.88 Aligned_cols=252 Identities=28% Similarity=0.460 Sum_probs=205.7
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc----chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLV 213 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv 213 (468)
+|.+.+.||.|+||.||+|.+..+|+.||||.+.... ....+|+.+++.++||||+++++++. ....+|+|
T Consensus 20 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~~~~~~lv 94 (296)
T cd06655 20 KYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFL-----VGDELFVV 94 (296)
T ss_pred eEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEe-----cCceEEEE
Confidence 5999999999999999999999999999999885432 23456999999999999999999883 44468999
Q ss_pred eecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCCC
Q 012233 214 LEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPG 293 (468)
Q Consensus 214 ~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~~ 293 (468)
+||+.++.+..... ...+++..+..++.|++.||+|||+ .|++|+||||+||+++.++ .++|+|||++......
T Consensus 95 ~e~~~~~~L~~~~~----~~~l~~~~~~~i~~~l~~al~~LH~-~~i~H~dL~p~Nili~~~~-~~kl~dfg~~~~~~~~ 168 (296)
T cd06655 95 MEYLAGGSLTDVVT----ETCMDEAQIAAVCRECLQALEFLHA-NQVIHRDIKSDNVLLGMDG-SVKLTDFGFCAQITPE 168 (296)
T ss_pred EEecCCCcHHHHHH----hcCCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEECCCC-CEEEccCccchhcccc
Confidence 99999876654332 3458899999999999999999998 8999999999999999887 7999999998765433
Q ss_pred CC-CccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCCc
Q 012233 294 EP-NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYT 372 (468)
Q Consensus 294 ~~-~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 372 (468)
.. .....++..|+|||.+.+. .++.++|+|||||++|+|++|..||...+.......+... ..+
T Consensus 169 ~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~-~~~------------- 233 (296)
T cd06655 169 QSKRSTMVGTPYWMAPEVVTRK-AYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN-GTP------------- 233 (296)
T ss_pred cccCCCcCCCccccCcchhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc-CCc-------------
Confidence 22 2345688999999998654 4889999999999999999999999887765554433221 000
Q ss_pred cCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCC
Q 012233 373 EFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLR 427 (468)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~ 427 (468)
.. ..+..+++.+.+||.+||..||.+||++.+++.||||+...
T Consensus 234 ~~------------~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~~~~ 276 (296)
T cd06655 234 EL------------QNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLAK 276 (296)
T ss_pred cc------------CCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhChHhhhcc
Confidence 00 02235788999999999999999999999999999998654
No 189
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=7e-41 Score=333.44 Aligned_cols=286 Identities=34% Similarity=0.566 Sum_probs=221.4
Q ss_pred cceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc------chHHHHHHHHHHcCCCCcccccceeeecCC-CCceE
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTE-KDELY 209 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~-~~~~~ 209 (468)
++|.+.+.||+|+||.||+|.+..+|+.||+|++.... ....+|+.+++.++||||+++++++..... .....
T Consensus 17 ~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 96 (345)
T cd07877 17 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND 96 (345)
T ss_pred CceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeeccccccccc
Confidence 46999999999999999999999999999999885432 234469999999999999999998754322 12234
Q ss_pred EEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccc
Q 012233 210 LNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (468)
Q Consensus 210 ~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~ 289 (468)
.|++++++++.+..... ...+++..++.++.||+.||.|||+ .||+||||||+||+++.++ .+||+|||++..
T Consensus 97 ~~lv~~~~~~~L~~~~~-----~~~l~~~~~~~i~~qi~~aL~~LH~-~~ivH~dlkp~NIll~~~~-~~kl~dfg~~~~ 169 (345)
T cd07877 97 VYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDC-ELKILDFGLARH 169 (345)
T ss_pred EEEEehhcccCHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH-CCeeecCCChHHEEEcCCC-CEEEeccccccc
Confidence 78999998776655432 2458899999999999999999998 8999999999999999888 799999999875
Q ss_pred cCCCCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCC
Q 012233 290 LVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP 369 (468)
Q Consensus 290 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 369 (468)
.. .......++..|+|||.+.+...++.++|||||||++|+|++|+.||...+....+..+....+.+..........
T Consensus 170 ~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (345)
T cd07877 170 TD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 247 (345)
T ss_pred cc--ccccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhccc
Confidence 43 2333467889999999987655688999999999999999999999998887777788877777666555433221
Q ss_pred CCccCC---CCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCCCCCCC
Q 012233 370 NYTEFK---FPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNTC 432 (468)
Q Consensus 370 ~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~~~~~~ 432 (468)
...... .+......+. ......++++++||.+||+.||.+|+++.+++.||||++...+..-
T Consensus 248 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~~~~~~~~ 312 (345)
T cd07877 248 ESARNYIQSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 312 (345)
T ss_pred HhHHHHHHHhcccCCcchh-hhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhhcCCCCcc
Confidence 111000 0000011111 1122468899999999999999999999999999999987665533
No 190
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=5.4e-41 Score=326.29 Aligned_cols=257 Identities=26% Similarity=0.387 Sum_probs=204.1
Q ss_pred cceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc----chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEE
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNL 212 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~l 212 (468)
+.|++.+.||.|+||.||+|.+..++..|++|.+.... ....+|+.+++.++||||+++++++. .....|+
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~l 86 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFY-----WDGKLWI 86 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEE-----eCCeEEE
Confidence 35999999999999999999999999999999985433 23446899999999999999999884 3346899
Q ss_pred EeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCC
Q 012233 213 VLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP 292 (468)
Q Consensus 213 v~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~ 292 (468)
||||++++.+..... .....+++..+..++.||+.||.|||+ .||+||||||+||+++.++ .++|+|||++.....
T Consensus 87 v~e~~~~~~l~~~~~--~~~~~l~~~~~~~~~~ql~~~l~~lH~-~~i~H~dlkp~Nili~~~~-~~kl~dfg~~~~~~~ 162 (292)
T cd06644 87 MIEFCPGGAVDAIML--ELDRGLTEPQIQVICRQMLEALQYLHS-MKIIHRDLKAGNVLLTLDG-DIKLADFGVSAKNVK 162 (292)
T ss_pred EEecCCCCcHHHHHH--hhcCCCCHHHHHHHHHHHHHHHHHHhc-CCeeecCCCcceEEEcCCC-CEEEccCccceeccc
Confidence 999999876653322 223568899999999999999999998 8999999999999999877 799999999865432
Q ss_pred CC-CCccccccCCccccccccC----CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhc
Q 012233 293 GE-PNISYICSRYYRAPELIFG----ATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCM 367 (468)
Q Consensus 293 ~~-~~~~~~gt~~y~aPE~~~~----~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 367 (468)
.. ......+++.|+|||++.+ ...++.++|+|||||++|+|++|..||...+....+.++... ..
T Consensus 163 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~---~~------- 232 (292)
T cd06644 163 TLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS---EP------- 232 (292)
T ss_pred cccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcC---CC-------
Confidence 21 2234567899999999852 233688999999999999999999999876654444333221 00
Q ss_pred CCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCCC
Q 012233 368 NPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRD 428 (468)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~~ 428 (468)
... ..+..++.++.+||.+||..||++||++.++++||||..+..
T Consensus 233 ----~~~------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~ 277 (292)
T cd06644 233 ----PTL------------SQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPFVSSVTS 277 (292)
T ss_pred ----ccC------------CCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccccc
Confidence 000 012346789999999999999999999999999999987644
No 191
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=3.7e-41 Score=322.72 Aligned_cols=253 Identities=28% Similarity=0.480 Sum_probs=201.4
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc----------chHHHHHHHHHHcCCCCcccccceeeecCCCCc
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK----------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDE 207 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~----------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 207 (468)
+|...+.||+|+||.||++.+..+++.||+|++.... ..+.+|+.+++.++|+||+++++++ .+.
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-----~~~ 75 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGAT-----CED 75 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhcee-----ccC
Confidence 3888899999999999999999999999999885422 2345799999999999999999998 444
Q ss_pred eEEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCc
Q 012233 208 LYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSA 287 (468)
Q Consensus 208 ~~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a 287 (468)
...++||||+.++.+..... ....+++..+..++.||+.||.|||+ +|++|+||||+||+++.++..++|+|||.+
T Consensus 76 ~~~~~v~e~~~~~~L~~~l~---~~~~~~~~~~~~~~~ql~~al~~LH~-~~i~H~~i~~~nil~~~~~~~~~l~dfg~~ 151 (268)
T cd06630 76 SHFNLFVEWMAGGSVSHLLS---KYGAFKEAVIINYTEQLLRGLSYLHE-NQIIHRDVKGANLLIDSTGQRLRIADFGAA 151 (268)
T ss_pred CeEEEEEeccCCCcHHHHHH---HhCCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEEcCCCCEEEEcccccc
Confidence 56889999999765543322 23568889999999999999999998 899999999999999877657999999998
Q ss_pred cccCCCCC-----CccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHH
Q 012233 288 KMLVPGEP-----NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTRE 362 (468)
Q Consensus 288 ~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~ 362 (468)
........ .....++..|+|||.+.+. .++.++|+|||||++|+|++|..||...........+......
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~-~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~---- 226 (268)
T cd06630 152 ARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGE-QYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASA---- 226 (268)
T ss_pred cccccccccCCccccccccccceeCHhHhccC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhcc----
Confidence 76643211 1234678899999998654 4889999999999999999999999765443333322221000
Q ss_pred HHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCC
Q 012233 363 EIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFD 424 (468)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~ 424 (468)
.. ...++..+++++.++|.+||..||.+||++.++++||||+
T Consensus 227 --------~~------------~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~~~~~ 268 (268)
T cd06630 227 --------TT------------APSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKHPVFR 268 (268)
T ss_pred --------CC------------CCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcCcccC
Confidence 00 0113345788999999999999999999999999999995
No 192
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=1.5e-41 Score=329.41 Aligned_cols=261 Identities=23% Similarity=0.363 Sum_probs=202.7
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc-----chHHHHHHHHHHcC-CCCcccccceeeecCCCCceEEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-----RYKNRELQIMRLLN-HPNVVSLKHCFFSTTEKDELYLN 211 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-----~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~~~~~~ 211 (468)
+|...+.||+|+||.||++.+..+++.||+|.+.... ....+|+.++.++. |+||+++++++.. ....+
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~-----~~~~~ 79 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFR-----EGDCW 79 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEec-----CCcEE
Confidence 4677789999999999999999999999999885432 23456888888886 9999999998843 33478
Q ss_pred EEeecccchHHHHHhhh-hhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCcccc
Q 012233 212 LVLEYISETVYRVSKHY-TRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (468)
Q Consensus 212 lv~e~~~~~ll~~~~~~-~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~ 290 (468)
++|||+...+..+.... ......+++..+..++.|++.||+|||+..||+||||||+|||++.++ .++|+|||++...
T Consensus 80 ~~~e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~-~~kl~dfg~~~~~ 158 (288)
T cd06616 80 ICMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNG-NIKLCDFGISGQL 158 (288)
T ss_pred EEEecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCC-cEEEeecchhHHh
Confidence 99999987655443322 223467899999999999999999999635999999999999999887 7999999999766
Q ss_pred CCCCCCccccccCCccccccccCC--CCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcC
Q 012233 291 VPGEPNISYICSRYYRAPELIFGA--TEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMN 368 (468)
Q Consensus 291 ~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 368 (468)
..........|++.|+|||++.+. ..++.++|||||||++|+|++|+.||..... ....+.+.....
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~--~~~~~~~~~~~~--------- 227 (288)
T cd06616 159 VDSIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS--VFDQLTQVVKGD--------- 227 (288)
T ss_pred ccCCccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcch--HHHHHhhhcCCC---------
Confidence 544444455788999999999765 3589999999999999999999999976541 112221111000
Q ss_pred CCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCC
Q 012233 369 PNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLR 427 (468)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~ 427 (468)
.+.+. ...+..++.++.+||.+||+.||.+|||+.+++.||||+...
T Consensus 228 -------~~~~~-----~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~~~~ 274 (288)
T cd06616 228 -------PPILS-----NSEEREFSPSFVNFINLCLIKDESKRPKYKELLEHPFIKDYE 274 (288)
T ss_pred -------CCcCC-----CcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhchh
Confidence 00000 011234789999999999999999999999999999998754
No 193
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=4.2e-41 Score=327.88 Aligned_cols=251 Identities=26% Similarity=0.412 Sum_probs=202.5
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc----chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLV 213 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv 213 (468)
+|.+.+.||+|+||.||+|.+..++..||+|.+.... ....+|+.+++.+.|+||+++++.|.. ..+.|+|
T Consensus 21 ~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~-----~~~~~lv 95 (296)
T cd06654 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV-----GDELWVV 95 (296)
T ss_pred ceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEe-----CCEEEEe
Confidence 5999999999999999999999999999999885432 334579999999999999999998843 3468999
Q ss_pred eecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCCC
Q 012233 214 LEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPG 293 (468)
Q Consensus 214 ~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~~ 293 (468)
|||+.++.+..... ...+++..+..++.|++.||.|||+ .||+|+||||+|||++.++ .++|+|||++......
T Consensus 96 ~e~~~~~~L~~~~~----~~~~~~~~~~~i~~ql~~aL~~LH~-~gi~H~dLkp~Nill~~~~-~~kl~dfg~~~~~~~~ 169 (296)
T cd06654 96 MEYLAGGSLTDVVT----ETCMDEGQIAAVCRECLQALEFLHS-NQVIHRDIKSDNILLGMDG-SVKLTDFGFCAQITPE 169 (296)
T ss_pred ecccCCCCHHHHHH----hcCCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEEcCCC-CEEECccccchhcccc
Confidence 99998765543322 2457888999999999999999998 8999999999999999887 7999999998765433
Q ss_pred C-CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCCc
Q 012233 294 E-PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYT 372 (468)
Q Consensus 294 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 372 (468)
. ......+++.|+|||.+.+. .++.++|||||||++|+|++|+.||...........+... ..+
T Consensus 170 ~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~-~~~------------- 234 (296)
T cd06654 170 QSKRSTMVGTPYWMAPEVVTRK-AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN-GTP------------- 234 (296)
T ss_pred ccccCcccCCccccCHHHHcCC-CCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcC-CCC-------------
Confidence 2 22345788999999998654 4789999999999999999999999877654433322210 000
Q ss_pred cCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCC
Q 012233 373 EFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDL 426 (468)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~ 426 (468)
. ...+..++..+.+||.+||..||.+||++.+++.||||...
T Consensus 235 ~------------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~~~~~~~ 276 (296)
T cd06654 235 E------------LQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIA 276 (296)
T ss_pred C------------CCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhChhhhcc
Confidence 0 00123578899999999999999999999999999999864
No 194
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=3.6e-41 Score=324.27 Aligned_cols=252 Identities=25% Similarity=0.382 Sum_probs=205.0
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc-----chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNL 212 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~l 212 (468)
+|.+.+.||.|+||.||+|.+..+++.||+|.+.... ..+.+|+.+++.++|+||+++++++. +..++|+
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~~ 76 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFL-----KGSKLWI 76 (274)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEE-----ECCeEEE
Confidence 5889999999999999999999999999999885432 23457999999999999999999884 3356899
Q ss_pred EeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCC
Q 012233 213 VLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP 292 (468)
Q Consensus 213 v~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~ 292 (468)
|+||+.++.+..... ...+++..++.++.|++.||.|||+ .||+|+||+|+||+++.++ .++|+|||+++....
T Consensus 77 v~e~~~~~~L~~~~~----~~~~~~~~~~~~~~ql~~~l~~lh~-~~i~h~dl~p~ni~i~~~~-~~~l~d~g~~~~~~~ 150 (274)
T cd06609 77 IMEYCGGGSCLDLLK----PGKLDETYIAFILREVLLGLEYLHE-EGKIHRDIKAANILLSEEG-DVKLADFGVSGQLTS 150 (274)
T ss_pred EEEeeCCCcHHHHHh----hcCCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCHHHEEECCCC-CEEEcccccceeecc
Confidence 999998765443222 1278999999999999999999998 8999999999999999888 799999999987654
Q ss_pred C-CCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCC
Q 012233 293 G-EPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNY 371 (468)
Q Consensus 293 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 371 (468)
. .......+++.|+|||.+.+.. ++.++|||||||++|+|++|..||...+.......+....
T Consensus 151 ~~~~~~~~~~~~~y~~PE~~~~~~-~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~--------------- 214 (274)
T cd06609 151 TMSKRNTFVGTPFWMAPEVIKQSG-YDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNN--------------- 214 (274)
T ss_pred cccccccccCCccccChhhhccCC-CCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhcC---------------
Confidence 3 2334567888999999997655 8999999999999999999999997765444333322210
Q ss_pred ccCCCCcccCCCcccccccC-CCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCCCC
Q 012233 372 TEFKFPQIKAHPWHKIFHKR-MPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDP 429 (468)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~-~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~~~ 429 (468)
.+ .+... +++++.++|.+||..||++|||+.+++.||||++....
T Consensus 215 ----~~---------~~~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~~~~~~~~~ 260 (274)
T cd06609 215 ----PP---------SLEGNKFSKPFKDFVSLCLNKDPKERPSAKELLKHKFIKKAKKT 260 (274)
T ss_pred ----CC---------CCcccccCHHHHHHHHHHhhCChhhCcCHHHHhhChhhcCCCcc
Confidence 00 01122 68889999999999999999999999999999886554
No 195
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=7.7e-41 Score=318.14 Aligned_cols=249 Identities=29% Similarity=0.440 Sum_probs=203.9
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeecc------cchHHHHHHHHHHcCCCCcccccceeeecCCCCceEEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~------~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~ 211 (468)
+|++.+.||+|+||.||+|.+..+++.+|+|.+... .....+|+.+++.++||||+++++.+ ......+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~~~ 75 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENF-----LEDKALM 75 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeE-----ecCCEEE
Confidence 489999999999999999999999999999988543 22345799999999999999999987 3444689
Q ss_pred EEeecccchHH-HHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCcccc
Q 012233 212 LVLEYISETVY-RVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (468)
Q Consensus 212 lv~e~~~~~ll-~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~ 290 (468)
+||||++++.+ +.+.. .....+++..+..++.|++.||.|||+ +||+|+||||+||+++.++..++|+|||.+...
T Consensus 76 lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~ 152 (256)
T cd08220 76 IVMEYAPGGTLAEYIQK--RCNSLLDEDTILHFFVQILLALHHVHT-KLILHRDLKTQNILLDKHKMVVKIGDFGISKIL 152 (256)
T ss_pred EEEecCCCCCHHHHHHH--hcccCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEEcCCCCEEEEccCCCceec
Confidence 99999987544 33322 123457889999999999999999998 899999999999999876657899999999877
Q ss_pred CCCCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCC
Q 012233 291 VPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPN 370 (468)
Q Consensus 291 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 370 (468)
..........++..|+|||.+.+. .++.++||||||+++|+|++|..||...+.......+......
T Consensus 153 ~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~------------ 219 (256)
T cd08220 153 SSKSKAYTVVGTPCYISPELCEGK-PYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTFA------------ 219 (256)
T ss_pred CCCccccccccCCcccCchhccCC-CCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcCCC------------
Confidence 555444456789999999998654 4889999999999999999999999887665554444331000
Q ss_pred CccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCC
Q 012233 371 YTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (468)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f 423 (468)
.++..++.++.++|.+||+.||.+|||+.|++.||||
T Consensus 220 ----------------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~p~~ 256 (256)
T cd08220 220 ----------------PISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQPIC 256 (256)
T ss_pred ----------------CCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhCCCC
Confidence 0223478899999999999999999999999999997
No 196
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=9.1e-41 Score=317.67 Aligned_cols=249 Identities=25% Similarity=0.369 Sum_probs=201.5
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeecc------cchHHHHHHHHHHcCCCCcccccceeeecCCCCceEEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~------~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~ 211 (468)
+|.+.+.||+|+||.||+|.+..+++.|++|.+... .....+|+.+++.++||||+++++++ ......|
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~ 75 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESF-----LDKGKLN 75 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeee-----ccCCEEE
Confidence 388899999999999999999999999999987532 23345689999999999999999988 4445689
Q ss_pred EEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccC
Q 012233 212 LVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (468)
Q Consensus 212 lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~ 291 (468)
+||||+.++.+...... .....++...++.++.|++.||.|||+ .||+|+||||+||+++.++ .++|+|||++....
T Consensus 76 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~i~~~l~~al~~lH~-~~i~h~dl~~~nili~~~~-~~~l~df~~~~~~~ 152 (256)
T cd08529 76 IVMEYAENGDLHKLLKM-QRGRPLPEDQVWRFFIQILLGLAHLHS-KKILHRDIKSLNLFLDAYD-NVKIGDLGVAKLLS 152 (256)
T ss_pred EEEEeCCCCcHHHHHHH-hcCCCCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCcceEEEeCCC-CEEEcccccceecc
Confidence 99999986544432221 124568889999999999999999998 8999999999999999887 79999999987664
Q ss_pred CCCC-CccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCC
Q 012233 292 PGEP-NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPN 370 (468)
Q Consensus 292 ~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 370 (468)
.... .....+++.|+|||++.+.. ++.++|+|||||++|+|++|+.||...+..+....+....
T Consensus 153 ~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-------------- 217 (256)
T cd08529 153 DNTNFANTIVGTPYYLSPELCEDKP-YNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGV-------------- 217 (256)
T ss_pred CccchhhccccCccccCHHHhcCCC-CCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC--------------
Confidence 3322 23456889999999997654 8899999999999999999999998777554444433210
Q ss_pred CccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCC
Q 012233 371 YTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (468)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f 423 (468)
++ .+...++.++.++|.+||+.+|++||++.+++.|||+
T Consensus 218 -----~~---------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 256 (256)
T cd08529 218 -----FP---------PVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRNPSL 256 (256)
T ss_pred -----CC---------CCccccCHHHHHHHHHHccCCcccCcCHHHHhhCCCC
Confidence 00 0222478899999999999999999999999999996
No 197
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=3.7e-41 Score=322.70 Aligned_cols=246 Identities=30% Similarity=0.496 Sum_probs=198.4
Q ss_pred eEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc-------------chHHHHHHHHHHcCCCCcccccceeeecCCC
Q 012233 139 YMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEK 205 (468)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-------------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 205 (468)
|.+...||.|+||.||+|.+..++..||+|.+.... ....+|+.+++.++||||+++++++.
T Consensus 2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~----- 76 (267)
T cd06628 2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSL----- 76 (267)
T ss_pred ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEE-----
Confidence 778899999999999999998899999999875321 23457899999999999999999873
Q ss_pred CceEEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeec
Q 012233 206 DELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFG 285 (468)
Q Consensus 206 ~~~~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG 285 (468)
...+.++||||++++.+.... .....+++..+..++.|++.||.|||+ .|++||||+|+||+++.++ .++|+|||
T Consensus 77 ~~~~~~lv~e~~~~~~L~~~l---~~~~~l~~~~~~~~~~~l~~~l~~lH~-~~ivH~di~p~nil~~~~~-~~~l~dfg 151 (267)
T cd06628 77 DADHLNIFLEYVPGGSVAALL---NNYGAFEETLVRNFVRQILKGLNYLHN-RGIIHRDIKGANILVDNKG-GIKISDFG 151 (267)
T ss_pred eCCccEEEEEecCCCCHHHHH---HhccCccHHHHHHHHHHHHHHHHHHHh-cCcccccCCHHHEEEcCCC-CEEecccC
Confidence 344688999999875443222 223568888999999999999999998 8999999999999999887 79999999
Q ss_pred CccccCCCC-------CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCC
Q 012233 286 SAKMLVPGE-------PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGT 358 (468)
Q Consensus 286 ~a~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~ 358 (468)
.++...... ......|+..|+|||.+.+. .++.++|+|||||++|+|++|+.||...+....+..+...
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--- 227 (267)
T cd06628 152 ISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQT-SYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGEN--- 227 (267)
T ss_pred CCcccccccccCCccccccccCCCcCccChhHhccC-CCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhcc---
Confidence 987664211 11234578899999998654 4889999999999999999999999876655444333220
Q ss_pred CCHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCC
Q 012233 359 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (468)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f 423 (468)
.. ..++..++.++.++|.+||+.||.+||++.+++.||||
T Consensus 228 ----------------~~---------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 267 (267)
T cd06628 228 ----------------AS---------PEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKHPFL 267 (267)
T ss_pred ----------------CC---------CcCCcccCHHHHHHHHHHccCCchhCcCHHHHhhCCCC
Confidence 00 01234578899999999999999999999999999998
No 198
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.6e-41 Score=350.66 Aligned_cols=283 Identities=19% Similarity=0.249 Sum_probs=198.4
Q ss_pred ccceEEeceecccCceEEEEEEEcCCCC-EEEEE------------------Eeecc---cchHHHHHHHHHHcCCCCcc
Q 012233 136 TISYMAERVVGTGSFGVVFQAKCLETGD-SVAIK------------------KVLQD---KRYKNRELQIMRLLNHPNVV 193 (468)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~~~~g~-~vaiK------------------~~~~~---~~~~~~E~~il~~l~hpnIv 193 (468)
..+|++.+.||+|+||+||+|..+.... .+++| .+... ...+.+|+.+|+.++|||||
T Consensus 147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv 226 (501)
T PHA03210 147 LAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENIL 226 (501)
T ss_pred hhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcC
Confidence 3579999999999999999987643322 12222 11111 12345799999999999999
Q ss_pred cccceeeecCCCCceEEEEEeecccchHHHHHhhhh-hcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeee
Q 012233 194 SLKHCFFSTTEKDELYLNLVLEYISETVYRVSKHYT-RMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLV 272 (468)
Q Consensus 194 ~l~~~~~~~~~~~~~~~~lv~e~~~~~ll~~~~~~~-~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl 272 (468)
++++++. +....|+|++++.++++..+.... ..........++.++.||+.||.|||+ +|||||||||+||||
T Consensus 227 ~l~~~~~-----~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~-~gIiHrDLKP~NILl 300 (501)
T PHA03210 227 KIEEILR-----SEANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHD-KKLIHRDIKLENIFL 300 (501)
T ss_pred cEeEEEE-----ECCeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEE
Confidence 9999883 344588999999988776543221 112334466788899999999999998 899999999999999
Q ss_pred cCCCCcEEEeeecCccccCCCC--CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCC-CCC--CCcHH
Q 012233 273 NPHTHQLKICDFGSAKMLVPGE--PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPL-FPG--ESGVD 347 (468)
Q Consensus 273 ~~~~~~vkL~DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~p-f~~--~~~~~ 347 (468)
+.++ .+||+|||+++.+.... .....+||+.|+|||++.+.. ++.++|||||||++|||++|..+ |.. .....
T Consensus 301 ~~~~-~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~ 378 (501)
T PHA03210 301 NCDG-KIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDG-YCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGK 378 (501)
T ss_pred CCCC-CEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCC-CCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHH
Confidence 9888 79999999998764432 223467999999999997654 89999999999999999998754 432 23445
Q ss_pred HHHHHHHHhCCCCHHHHhhc----CCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCC
Q 012233 348 QLVEIIKILGTPTREEIKCM----NPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (468)
Q Consensus 348 ~~~~i~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f 423 (468)
++.+++..+.....+ +... ........+.......-.......++.++.++|.+||++||.+|||+.|+|.||||
T Consensus 379 ~~~~~~~~~~~~~~~-~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f 457 (501)
T PHA03210 379 QLLKIIDSLSVCDEE-FPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPLF 457 (501)
T ss_pred HHHHHHHhcccChhh-cCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChhh
Confidence 666666655432211 0000 00000000000000000001122467889999999999999999999999999999
Q ss_pred CCCC
Q 012233 424 DDLR 427 (468)
Q Consensus 424 ~~~~ 427 (468)
....
T Consensus 458 ~~~~ 461 (501)
T PHA03210 458 SAEE 461 (501)
T ss_pred hcCC
Confidence 8754
No 199
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=1.7e-40 Score=328.43 Aligned_cols=305 Identities=36% Similarity=0.677 Sum_probs=229.9
Q ss_pred ccceEEeceecccCceEEEEEEEcCCCCEEEEEEeecc------cchHHHHHHHHHHcCCCCcccccceeeecCCCCceE
Q 012233 136 TISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELY 209 (468)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~------~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~ 209 (468)
.++|.+.+.||.|+||.||+|.+..+++.||||++.+. .....+|+.+++.++||||++++++|.... ..
T Consensus 9 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~----~~ 84 (328)
T cd07856 9 TNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPL----ED 84 (328)
T ss_pred ccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCC----Cc
Confidence 34699999999999999999999999999999987432 234457999999999999999999874322 24
Q ss_pred EEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccc
Q 012233 210 LNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (468)
Q Consensus 210 ~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~ 289 (468)
.|+||||+++++...+. ...++...+..++.||+.||.|||+ .||+|+||+|.|||++.++ .++|+|||.+..
T Consensus 85 ~~lv~e~~~~~L~~~~~-----~~~~~~~~~~~~~~ql~~aL~~LH~-~~iiH~dl~p~Nili~~~~-~~~l~dfg~~~~ 157 (328)
T cd07856 85 IYFVTELLGTDLHRLLT-----SRPLEKQFIQYFLYQILRGLKYVHS-AGVVHRDLKPSNILINENC-DLKICDFGLARI 157 (328)
T ss_pred EEEEeehhccCHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCHHHEeECCCC-CEEeCccccccc
Confidence 78999999877655433 3457888888999999999999998 8999999999999999887 799999999875
Q ss_pred cCCCCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCC
Q 012233 290 LVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP 369 (468)
Q Consensus 290 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 369 (468)
... ......++..|+|||.+.+...++.++|+|||||++|+|++|++||...........+.+.++.++.+.......
T Consensus 158 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (328)
T cd07856 158 QDP--QMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICS 235 (328)
T ss_pred cCC--CcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccc
Confidence 422 223456788999999986645689999999999999999999999998888777777778888777654432211
Q ss_pred CC-ccC--CCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCCCCCCCCCCCCCCCcccccC
Q 012233 370 NY-TEF--KFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNTCLPNGRPLPTLFNFT 446 (468)
Q Consensus 370 ~~-~~~--~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~~~~~~~~~~~~~~~~~~~~ 446 (468)
.- ..+ ..+.....+... ..+.+++.+.++|++||+.+|.+|||+.+++.||||+....+... +..-. .=.++|+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~~~~~~~~-~~~~~-~~~~~~~ 312 (328)
T cd07856 236 ENTLRFVQSLPKREPVPFSE-KFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAPYHDPTDE-PVAEE-KFDWSFN 312 (328)
T ss_pred hhhHHHHhhccccCCCcHHH-HcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCccccccCCccc-cCchh-hcCCchh
Confidence 10 000 000000111111 224578899999999999999999999999999999987766444 22111 1124555
Q ss_pred HHHHhcCCHHHHH
Q 012233 447 AQELAGASNELRQ 459 (468)
Q Consensus 447 ~~~~~~~~~~~~~ 459 (468)
+ ++.+.++|+
T Consensus 313 ~---~~~~~~~~~ 322 (328)
T cd07856 313 D---ADLPVDTWK 322 (328)
T ss_pred c---ccCCHHHHH
Confidence 4 345555554
No 200
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=4.8e-41 Score=322.10 Aligned_cols=249 Identities=27% Similarity=0.441 Sum_probs=196.8
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeecc---------cchHHHHHHHHHHcCCCCcccccceeeecCCCCce
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD---------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDEL 208 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~---------~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 208 (468)
+|...+.||+|+||.||+|.+..++..||+|++... .....+|+.+++.++||||+++++++... ...
T Consensus 3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---~~~ 79 (266)
T cd06651 3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDR---AEK 79 (266)
T ss_pred CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcC---CCC
Confidence 599999999999999999999999999999987532 12345799999999999999999877432 234
Q ss_pred EEEEEeecccchHHH-HHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCc
Q 012233 209 YLNLVLEYISETVYR-VSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSA 287 (468)
Q Consensus 209 ~~~lv~e~~~~~ll~-~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a 287 (468)
.++++|||++++.+. .+. ....+++...+.++.|++.||.|||+ .||+|+||||+||+++.++ .++|+|||++
T Consensus 80 ~~~l~~e~~~~~~L~~~l~----~~~~l~~~~~~~~~~qi~~~l~~LH~-~~i~H~~l~p~nil~~~~~-~~~l~dfg~~ 153 (266)
T cd06651 80 TLTIFMEYMPGGSVKDQLK----AYGALTESVTRKYTRQILEGMSYLHS-NMIVHRDIKGANILRDSAG-NVKLGDFGAS 153 (266)
T ss_pred EEEEEEeCCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHh-CCeeeCCCCHHHEEECCCC-CEEEccCCCc
Confidence 678999999875443 332 23457888899999999999999998 8999999999999999887 7999999998
Q ss_pred cccCCC----CCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHH
Q 012233 288 KMLVPG----EPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREE 363 (468)
Q Consensus 288 ~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~ 363 (468)
...... .......++..|+|||.+.+. .++.++|+|||||++|+|++|+.||........+..+.. .+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~---~~---- 225 (266)
T cd06651 154 KRLQTICMSGTGIRSVTGTPYWMSPEVISGE-GYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIAT---QP---- 225 (266)
T ss_pred cccccccccCCccccCCccccccCHHHhCCC-CCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhc---CC----
Confidence 755321 111234578899999999764 489999999999999999999999987654443333221 00
Q ss_pred HhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCC
Q 012233 364 IKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFD 424 (468)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~ 424 (468)
....++..+++.+++|| +||..+|.+||++.|++.||||+
T Consensus 226 --------------------~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~hp~~~ 265 (266)
T cd06651 226 --------------------TNPQLPSHISEHARDFL-GCIFVEARHRPSAEELLRHPFAQ 265 (266)
T ss_pred --------------------CCCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhcCcccc
Confidence 00112345788899999 67778999999999999999996
No 201
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=9.6e-41 Score=319.60 Aligned_cols=248 Identities=27% Similarity=0.418 Sum_probs=198.1
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc----------chHHHHHHHHHHcCCCCcccccceeeecCCCCc
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK----------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDE 207 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~----------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 207 (468)
+|++.+.||.|+||.||+|.+ .+|..+|+|.+.... ....+|+.+++.++|+||+++++++ .+.
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~ 74 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTC-----LDD 74 (265)
T ss_pred CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEe-----ecC
Confidence 388899999999999999986 578899999875331 2345799999999999999999988 444
Q ss_pred eEEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCc
Q 012233 208 LYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSA 287 (468)
Q Consensus 208 ~~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a 287 (468)
.+.++||||+.++.+.... .....+++..++.++.|++.||+|||+ .||+|+||+|+||+++.++ .++|+|||++
T Consensus 75 ~~~~lv~e~~~~~~L~~~l---~~~~~~~~~~~~~~~~qi~~~l~~lH~-~~i~H~dl~p~nil~~~~~-~~~l~dfg~~ 149 (265)
T cd06631 75 NTISIFMEFVPGGSISSIL---NRFGPLPEPVFCKYTKQILDGVAYLHN-NCVVHRDIKGNNVMLMPNG-IIKLIDFGCA 149 (265)
T ss_pred CeEEEEEecCCCCcHHHHH---HhcCCCCHHHHHHHHHHHHHHHHHHHh-CCcccCCcCHHhEEECCCC-eEEeccchhh
Confidence 5789999999886554332 223568889999999999999999998 8999999999999999887 7999999998
Q ss_pred cccCCC-------CCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCC
Q 012233 288 KMLVPG-------EPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPT 360 (468)
Q Consensus 288 ~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~ 360 (468)
...... .......++..|+|||++.+. .++.++|+|||||++|+|++|..||...+.......+.....
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~--- 225 (265)
T cd06631 150 RRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINES-GYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRG--- 225 (265)
T ss_pred HhhhhccccccccccccccCCCccccChhhhcCC-CCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccC---
Confidence 754211 112235678999999998654 488999999999999999999999987654443333222100
Q ss_pred HHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCC
Q 012233 361 REEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (468)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f 423 (468)
.. ..++..++.++.+||.+||+.+|.+||++.+++.||||
T Consensus 226 --------------~~---------~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~ 265 (265)
T cd06631 226 --------------LM---------PRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRHDFL 265 (265)
T ss_pred --------------CC---------CCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 00 11234578999999999999999999999999999998
No 202
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=1.9e-40 Score=320.83 Aligned_cols=278 Identities=35% Similarity=0.608 Sum_probs=215.1
Q ss_pred eEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc------chHHHHHHHHHHc---CCCCcccccceeeecCCCCceE
Q 012233 139 YMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------RYKNRELQIMRLL---NHPNVVSLKHCFFSTTEKDELY 209 (468)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~------~~~~~E~~il~~l---~hpnIv~l~~~~~~~~~~~~~~ 209 (468)
|.+.+.||+|+||.||+|.+..++..||+|.+.... ....+|+.+++.+ .|+||+++++++..........
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 678899999999999999998889999999885321 1234577777666 5999999999986654434445
Q ss_pred EEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccc
Q 012233 210 LNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (468)
Q Consensus 210 ~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~ 289 (468)
++++|||+.+.+...+.... ...+++..++.++.||+.||.|||+ .||+|+||+|+||+++.++ .++|+|||++..
T Consensus 81 ~~l~~e~~~~~l~~~l~~~~--~~~l~~~~~~~~~~~i~~al~~LH~-~~i~h~~l~~~nili~~~~-~~~l~dfg~~~~ 156 (287)
T cd07838 81 LTLVFEHVDQDLATYLSKCP--KPGLPPETIKDLMRQLLRGVDFLHS-HRIVHRDLKPQNILVTSDG-QVKIADFGLARI 156 (287)
T ss_pred eEEEehhcccCHHHHHHHcc--CCCCCHHHHHHHHHHHHHHHHHHHH-CCeeeccCChhhEEEccCC-CEEEeccCccee
Confidence 88999999987766544322 2358999999999999999999998 8999999999999999987 799999999977
Q ss_pred cCCCCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCC
Q 012233 290 LVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP 369 (468)
Q Consensus 290 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 369 (468)
...........++..|+|||++.+.. ++.++|+|||||++|+|++|++||...+..+.+.++......+....+....
T Consensus 157 ~~~~~~~~~~~~~~~~~~PE~~~~~~-~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 234 (287)
T cd07838 157 YSFEMALTSVVVTLWYRAPEVLLQSS-YATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNV- 234 (287)
T ss_pred ccCCcccccccccccccChHHhccCC-CCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCc-
Confidence 65444444556788999999997654 8999999999999999999999999988888888887766554433221100
Q ss_pred CCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCC
Q 012233 370 NYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (468)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f 423 (468)
......++......+ ....+.+++.+.+||.+||+.||.+||++.+++.||||
T Consensus 235 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~~~ 287 (287)
T cd07838 235 SLPRSSFPSYTPRSF-KSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPYF 287 (287)
T ss_pred ccchhhcccccccch-hhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcCcCC
Confidence 000111111111111 12234567889999999999999999999999999998
No 203
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=4.3e-41 Score=327.98 Aligned_cols=256 Identities=26% Similarity=0.408 Sum_probs=204.5
Q ss_pred cceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc----chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEE
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNL 212 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~l 212 (468)
.+|.+.+.||+|+||.||+|.+..+++.||+|.+.... ....+|+.+++.++|+||+++++++ ....+.|+
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~-----~~~~~~~l 93 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY-----LVGDELWV 93 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEE-----ecCCEEEE
Confidence 36999999999999999999999999999999885432 2345789999999999999999988 34446899
Q ss_pred EeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCC
Q 012233 213 VLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP 292 (468)
Q Consensus 213 v~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~ 292 (468)
||||++++.+..... ...+++..+..++.|++.||.|||+ .||+||||||+|||++.++ .++|+|||++.....
T Consensus 94 v~e~~~~~~L~~~~~----~~~~~~~~~~~~~~~l~~~L~~LH~-~~i~H~dL~p~Nili~~~~-~~~l~Dfg~~~~~~~ 167 (297)
T cd06656 94 VMEYLAGGSLTDVVT----ETCMDEGQIAAVCRECLQALDFLHS-NQVIHRDIKSDNILLGMDG-SVKLTDFGFCAQITP 167 (297)
T ss_pred eecccCCCCHHHHHH----hCCCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEECCCC-CEEECcCccceEccC
Confidence 999998765543322 2457888999999999999999998 8999999999999999887 799999999876543
Q ss_pred CCC-CccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCC
Q 012233 293 GEP-NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNY 371 (468)
Q Consensus 293 ~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 371 (468)
... .....+++.|+|||.+.+. .++.++|+|||||++|+|++|..||...+.......+.. .+.+
T Consensus 168 ~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~-~~~~------------ 233 (297)
T cd06656 168 EQSKRSTMVGTPYWMAPEVVTRK-AYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT-NGTP------------ 233 (297)
T ss_pred CccCcCcccCCccccCHHHHcCC-CCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeecc-CCCC------------
Confidence 322 2345788999999998654 488999999999999999999999977654332221111 0000
Q ss_pred ccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCCCCC
Q 012233 372 TEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPN 430 (468)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~~~~ 430 (468)
....+..++..+.+||.+||..||.+||++.+++.||||+..+...
T Consensus 234 -------------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~~ 279 (297)
T cd06656 234 -------------ELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKLAKPLS 279 (297)
T ss_pred -------------CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhccccccc
Confidence 0012245788899999999999999999999999999998765543
No 204
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=5.3e-41 Score=324.58 Aligned_cols=253 Identities=26% Similarity=0.373 Sum_probs=203.6
Q ss_pred eEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc----chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEEEe
Q 012233 139 YMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVL 214 (468)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv~ 214 (468)
|++.+.||+|+||.||+|.+..++..+++|.+.... ....+|+++++.++||||+++++++. .....++||
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~-----~~~~~~~v~ 81 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY-----YENNLWILI 81 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEe-----eCCEEEEEE
Confidence 788899999999999999999999999999885432 23456899999999999999999884 334688999
Q ss_pred ecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCCCC
Q 012233 215 EYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGE 294 (468)
Q Consensus 215 e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~~~ 294 (468)
||++++.+..... .....+++..+..++.||+.||.|||+ .||+||||||+|||++.++ .+||+|||++.......
T Consensus 82 e~~~~~~l~~~~~--~~~~~l~~~~~~~~~~qi~~~L~~LH~-~~i~H~dlkp~nili~~~~-~~kl~dfg~~~~~~~~~ 157 (282)
T cd06643 82 EFCAGGAVDAVML--ELERPLTEPQIRVVCKQTLEALNYLHE-NKIIHRDLKAGNILFTLDG-DIKLADFGVSAKNTRTI 157 (282)
T ss_pred EecCCCcHHHHHH--hcCCCCCHHHHHHHHHHHHHHHHHHHH-CCeeecCCCcccEEEccCC-CEEEccccccccccccc
Confidence 9999876654322 224568999999999999999999998 8999999999999999887 79999999986553221
Q ss_pred -CCccccccCCccccccccC----CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCC
Q 012233 295 -PNISYICSRYYRAPELIFG----ATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP 369 (468)
Q Consensus 295 -~~~~~~gt~~y~aPE~~~~----~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 369 (468)
......+++.|+|||++.. ...++.++|+|||||++|+|++|.+||...+..+...++......
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~----------- 226 (282)
T cd06643 158 QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPP----------- 226 (282)
T ss_pred cccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCC-----------
Confidence 2234578999999999842 234778999999999999999999999887766655554331100
Q ss_pred CCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCC
Q 012233 370 NYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDL 426 (468)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~ 426 (468)
.. ..+..++.++.+||.+||+.||.+||++.++++||||+..
T Consensus 227 ---~~------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 268 (282)
T cd06643 227 ---TL------------AQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPFVTVN 268 (282)
T ss_pred ---CC------------CCccccCHHHHHHHHHHccCChhhCcCHHHHhcCCCEecc
Confidence 00 0223478899999999999999999999999999999863
No 205
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=1e-40 Score=320.32 Aligned_cols=262 Identities=27% Similarity=0.399 Sum_probs=206.7
Q ss_pred CcccceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc---chHHHHHHHHHHc-CCCCcccccceeeecCC-CCce
Q 012233 134 KQTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK---RYKNRELQIMRLL-NHPNVVSLKHCFFSTTE-KDEL 208 (468)
Q Consensus 134 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~---~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~-~~~~ 208 (468)
...++|.+.+.||+|+||.||+|.+..+++.+++|++.... ..+.+|+.+++.+ .|+||+++++++..... ....
T Consensus 3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~ 82 (275)
T cd06608 3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDD 82 (275)
T ss_pred CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcce
Confidence 34567999999999999999999999899999999886543 3456799999998 69999999999865443 3355
Q ss_pred EEEEEeecccchHHH-HHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCc
Q 012233 209 YLNLVLEYISETVYR-VSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSA 287 (468)
Q Consensus 209 ~~~lv~e~~~~~ll~-~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a 287 (468)
++++||||+.++.+. ++.........+++..++.++.|++.||.|||+ .||+|+||+|+||+++.++ .++|+|||++
T Consensus 83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~-~~i~H~~l~p~ni~~~~~~-~~~l~d~~~~ 160 (275)
T cd06608 83 QLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHE-NKVIHRDIKGQNILLTKNA-EVKLVDFGVS 160 (275)
T ss_pred EEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhc-CCcccCCCCHHHEEEccCC-eEEECCCccc
Confidence 688999999975443 333323335678999999999999999999998 8999999999999999887 7999999998
Q ss_pred cccCCCC-CCccccccCCccccccccCC----CCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHH
Q 012233 288 KMLVPGE-PNISYICSRYYRAPELIFGA----TEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTRE 362 (468)
Q Consensus 288 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~----~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~ 362 (468)
....... ......++..|+|||++... ..++.++|||||||++|+|++|..||........+.++... +.
T Consensus 161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~---~~-- 235 (275)
T cd06608 161 AQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRN---PP-- 235 (275)
T ss_pred eecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhcc---CC--
Confidence 7653322 22345688999999987532 34678999999999999999999999876555544443321 00
Q ss_pred HHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCC
Q 012233 363 EIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (468)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f 423 (468)
..+. ....++.++.+||.+||..||.+|||+.+++.|||+
T Consensus 236 ---------~~~~------------~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~~ 275 (275)
T cd06608 236 ---------PTLK------------SPENWSKKFNDFISECLIKNYEQRPFMEELLEHPFI 275 (275)
T ss_pred ---------CCCC------------chhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCCC
Confidence 0000 112367889999999999999999999999999996
No 206
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=1.2e-40 Score=317.09 Aligned_cols=249 Identities=33% Similarity=0.510 Sum_probs=201.2
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc---------chHHHHHHHHHHcCCCCcccccceeeecCCCCce
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK---------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDEL 208 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~---------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 208 (468)
+|+..+.||+|+||.||+|.+..++..|++|.+.... ..+.+|+.+++.++|+||+++++++ .+..
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~-----~~~~ 75 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTE-----REED 75 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeE-----ecCC
Confidence 3778899999999999999998899999999875432 2345799999999999999999987 4445
Q ss_pred EEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCcc
Q 012233 209 YLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAK 288 (468)
Q Consensus 209 ~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~ 288 (468)
.+++||||++++.+.... .....+++..+..++.||+.||.|||+ .||+|+||+|+||+++.++ .+||+|||++.
T Consensus 76 ~~~lv~e~~~~~~L~~~~---~~~~~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dl~~~ni~~~~~~-~~kl~d~~~~~ 150 (258)
T cd06632 76 NLYIFLELVPGGSLAKLL---KKYGSFPEPVIRLYTRQILLGLEYLHD-RNTVHRDIKGANILVDTNG-VVKLADFGMAK 150 (258)
T ss_pred eEEEEEEecCCCcHHHHH---HhcCCCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEECCCC-CEEEccCccce
Confidence 688999999875443222 223458889999999999999999998 8999999999999999887 79999999987
Q ss_pred ccCCCCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcC
Q 012233 289 MLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMN 368 (468)
Q Consensus 289 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 368 (468)
............++..|+|||.+.....++.++|+|||||++|+|++|+.||......+....+.....
T Consensus 151 ~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~----------- 219 (258)
T cd06632 151 QVVEFSFAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKE----------- 219 (258)
T ss_pred eccccccccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhccc-----------
Confidence 664444344567899999999986543488999999999999999999999977664444333222100
Q ss_pred CCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCC
Q 012233 369 PNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (468)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f 423 (468)
. ..++..+++++.+||.+||+.+|.+||++.+++.||||
T Consensus 220 -------~---------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 258 (258)
T cd06632 220 -------L---------PPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEHPFV 258 (258)
T ss_pred -------C---------CCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcCCCC
Confidence 0 01334578999999999999999999999999999997
No 207
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.8e-42 Score=324.52 Aligned_cols=253 Identities=28% Similarity=0.451 Sum_probs=211.3
Q ss_pred cccceEEeceecccCceEEEEEEEcCCCCEEEEEEeecccch-------HHHHHHHHHHcC-CCCcccccceeeecCCCC
Q 012233 135 QTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRY-------KNRELQIMRLLN-HPNVVSLKHCFFSTTEKD 206 (468)
Q Consensus 135 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~~~-------~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~ 206 (468)
...+|..+.+||+|+||+|.+|..+.+.+.||||+++++... ...|.++|.... -|.+++|+.||. .
T Consensus 347 ~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQ-----T 421 (683)
T KOG0696|consen 347 KATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQ-----T 421 (683)
T ss_pred eecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhh-----h
Confidence 344699999999999999999999999999999988765322 235777877665 578999999883 3
Q ss_pred ceEEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecC
Q 012233 207 ELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGS 286 (468)
Q Consensus 207 ~~~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~ 286 (468)
-..+|.||||+.|+-|-... ..-+.|.+..+..|+..|+-||-|||+ +|||+||||.+|||++.++| +||+|||+
T Consensus 422 mDRLyFVMEyvnGGDLMyhi---QQ~GkFKEp~AvFYAaEiaigLFFLh~-kgIiYRDLKLDNvmLd~eGH-iKi~DFGm 496 (683)
T KOG0696|consen 422 MDRLYFVMEYVNGGDLMYHI---QQVGKFKEPVAVFYAAEIAIGLFFLHS-KGIIYRDLKLDNVMLDSEGH-IKIADFGM 496 (683)
T ss_pred hhheeeEEEEecCchhhhHH---HHhcccCCchhhhhhHHHHHHhhhhhc-CCeeeeeccccceEeccCCc-eEeeeccc
Confidence 34589999999987443222 223567788899999999999999998 99999999999999999995 99999999
Q ss_pred ccccC-CCCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHh
Q 012233 287 AKMLV-PGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIK 365 (468)
Q Consensus 287 a~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 365 (468)
++.-. .+....++||||.|+|||++.-.+ |+.++|+||+||+||||+.|++||.+++..+..+.|.+.
T Consensus 497 cKEni~~~~TTkTFCGTPdYiAPEIi~YqP-YgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~eh---------- 565 (683)
T KOG0696|consen 497 CKENIFDGVTTKTFCGTPDYIAPEIIAYQP-YGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEH---------- 565 (683)
T ss_pred ccccccCCcceeeecCCCcccccceEEecc-cccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHc----------
Confidence 97643 334556899999999999997555 999999999999999999999999999998888888762
Q ss_pred hcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCC-----HHHHhCCCCCCCCC
Q 012233 366 CMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCT-----ALEACAHPFFDDLR 427 (468)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s-----~~ell~hp~f~~~~ 427 (468)
... +++.+|.++.++++.+|.+.|.+|.. -.++..||||+.|.
T Consensus 566 -------nvs------------yPKslSkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~iD 613 (683)
T KOG0696|consen 566 -------NVS------------YPKSLSKEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRRID 613 (683)
T ss_pred -------cCc------------CcccccHHHHHHHHHHhhcCCccccCCCCccccchhhCcchhhcc
Confidence 222 55789999999999999999999984 45899999999763
No 208
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-41 Score=337.17 Aligned_cols=245 Identities=31% Similarity=0.460 Sum_probs=203.5
Q ss_pred cccceEEeceecccCceEEEEEEEcCCCCEEEEEEeecccchHHHHHHHHHHc-CCCCcccccceeeecCCCCceEEEEE
Q 012233 135 QTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRYKNRELQIMRLL-NHPNVVSLKHCFFSTTEKDELYLNLV 213 (468)
Q Consensus 135 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~~~~~~lv 213 (468)
....|.+...+|.|+|+.|..+.+..+++.+++|++.+......+|+.++... +||||+++.+.+ .+..++|+|
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~~~~~e~~~~~~~~~h~niv~~~~v~-----~~~~~~~~v 394 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRADDNQDEIPISLLVRDHPNIVKSHDVY-----EDGKEIYLV 394 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheeccccccccccccchhhhhcCCCcceeeccee-----cCCceeeee
Confidence 46679999999999999999999999999999999988877777788776555 699999999999 777789999
Q ss_pred eecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeee-cCCCCcEEEeeecCccccCC
Q 012233 214 LEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLV-NPHTHQLKICDFGSAKMLVP 292 (468)
Q Consensus 214 ~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl-~~~~~~vkL~DFG~a~~~~~ 292 (468)
||++.|+.+-.. .+....+. ..+..|++||+.|+.|||. +|||||||||+|||+ +..+ .++|+|||.++....
T Consensus 395 ~e~l~g~ell~r---i~~~~~~~-~e~~~w~~~lv~Av~~LH~-~gvvhRDLkp~NIL~~~~~g-~lrltyFG~a~~~~~ 468 (612)
T KOG0603|consen 395 MELLDGGELLRR---IRSKPEFC-SEASQWAAELVSAVDYLHE-QGVVHRDLKPGNILLDGSAG-HLRLTYFGFWSELER 468 (612)
T ss_pred ehhccccHHHHH---HHhcchhH-HHHHHHHHHHHHHHHHHHh-cCeeecCCChhheeecCCCC-cEEEEEechhhhCch
Confidence 999998754321 22233333 6778899999999999998 999999999999999 4666 799999999987654
Q ss_pred CCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCCc
Q 012233 293 GEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYT 372 (468)
Q Consensus 293 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 372 (468)
. ..+.+.|..|.|||++. ...|++++||||||++||+||+|+.||........+. ..++.+.
T Consensus 469 ~--~~tp~~t~~y~APEvl~-~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~---~~i~~~~------------ 530 (612)
T KOG0603|consen 469 S--CDTPALTLQYVAPEVLA-IQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIH---TRIQMPK------------ 530 (612)
T ss_pred h--hcccchhhcccChhhhc-cCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHH---HhhcCCc------------
Confidence 4 44557789999999997 4559999999999999999999999998776552222 2222221
Q ss_pred cCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCC
Q 012233 373 EFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (468)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f 423 (468)
+...+|+++++||+.||+.||.+|+++.+++.||||
T Consensus 531 ---------------~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~ 566 (612)
T KOG0603|consen 531 ---------------FSECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWF 566 (612)
T ss_pred ---------------cccccCHHHHHHHHHhccCChhhCcChhhhccCcch
Confidence 224589999999999999999999999999999999
No 209
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.5e-42 Score=342.21 Aligned_cols=250 Identities=26% Similarity=0.422 Sum_probs=205.8
Q ss_pred EEeceecccCceEEEEEEEcCCCCEEEEEEee------ccc--chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEE
Q 012233 140 MAERVVGTGSFGVVFQAKCLETGDSVAIKKVL------QDK--RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (468)
Q Consensus 140 ~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~------~~~--~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~ 211 (468)
+...+||+|+|-+||+|.|..+|..||.-.++ ... ..+..|+.+|+.|+||||+++|+.+.+.. ..++.
T Consensus 43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~---n~~in 119 (632)
T KOG0584|consen 43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTD---NKTIN 119 (632)
T ss_pred ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCC---Cceee
Confidence 45568999999999999999999999865432 112 34557999999999999999999986644 35688
Q ss_pred EEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhc-CCccccCCCCCCeeecCCCCcEEEeeecCcccc
Q 012233 212 LVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHV-VGVCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (468)
Q Consensus 212 lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~-~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~ 290 (468)
+|+|.+..|.|. .|.+..+.+.+..++.|++||++||.|||+. ..|||||||.+||||+.+.+.|||+|+|+|+..
T Consensus 120 ~iTEL~TSGtLr---~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~ 196 (632)
T KOG0584|consen 120 FITELFTSGTLR---EYRKKHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLL 196 (632)
T ss_pred eeeecccCCcHH---HHHHHhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHh
Confidence 999999977665 4455567889999999999999999999962 369999999999999988779999999999876
Q ss_pred CCCCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCC
Q 012233 291 VPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPN 370 (468)
Q Consensus 291 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 370 (468)
..... ...+|||.|||||++. ..|+..+||||||++++||+|+..||.-..+..++.+-+...-.|.
T Consensus 197 r~s~a-ksvIGTPEFMAPEmYE--E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~---------- 263 (632)
T KOG0584|consen 197 RKSHA-KSVIGTPEFMAPEMYE--ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPA---------- 263 (632)
T ss_pred hcccc-ceeccCccccChHHHh--hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHH----------
Confidence 54433 3479999999999984 4699999999999999999999999999888877766443222211
Q ss_pred CccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCC
Q 012233 371 YTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDD 425 (468)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~ 425 (468)
. |.+--.+++++||.+||.. .++|+|+.|+|.||||..
T Consensus 264 ------------s----l~kV~dPevr~fIekCl~~-~~~R~sa~eLL~d~Ff~~ 301 (632)
T KOG0584|consen 264 ------------A----LSKVKDPEVREFIEKCLAT-KSERLSAKELLKDPFFDE 301 (632)
T ss_pred ------------H----hhccCCHHHHHHHHHHhcC-chhccCHHHHhhChhhcc
Confidence 1 2222467899999999999 999999999999999987
No 210
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=8e-41 Score=323.23 Aligned_cols=257 Identities=25% Similarity=0.380 Sum_probs=200.3
Q ss_pred cceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc---chHHHHHHHHHHc-CCCCcccccceeeecCC-CCceEEE
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK---RYKNRELQIMRLL-NHPNVVSLKHCFFSTTE-KDELYLN 211 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~---~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~-~~~~~~~ 211 (468)
..|++.+.||.|+||.||+|.+..+++.+|+|++.... .....|+.+++.+ +|+||+++++++..... ....++|
T Consensus 16 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~ 95 (282)
T cd06636 16 GIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLW 95 (282)
T ss_pred hhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEEE
Confidence 35999999999999999999999999999999885442 2345688888888 69999999998854321 2345788
Q ss_pred EEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccC
Q 012233 212 LVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (468)
Q Consensus 212 lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~ 291 (468)
++|||++++.+..+.... ....+++..++.++.||+.||.|||+ .||+|+||||+||+++.++ .++|+|||++....
T Consensus 96 iv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~LH~-~~ivH~dl~~~nili~~~~-~~~l~dfg~~~~~~ 172 (282)
T cd06636 96 LVMEFCGAGSVTDLVKNT-KGNALKEDWIAYICREILRGLAHLHA-HKVIHRDIKGQNVLLTENA-EVKLVDFGVSAQLD 172 (282)
T ss_pred EEEEeCCCCcHHHHHHHc-cCCCCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEECCCC-CEEEeeCcchhhhh
Confidence 999999875443332221 23457888899999999999999998 8999999999999999888 79999999987553
Q ss_pred CC-CCCccccccCCccccccccC----CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhh
Q 012233 292 PG-EPNISYICSRYYRAPELIFG----ATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKC 366 (468)
Q Consensus 292 ~~-~~~~~~~gt~~y~aPE~~~~----~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 366 (468)
.. .......|++.|+|||.+.. ...++.++|+|||||++|+|++|..||........+..+... ..
T Consensus 173 ~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~---~~------ 243 (282)
T cd06636 173 RTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRN---PP------ 243 (282)
T ss_pred ccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhhC---CC------
Confidence 21 22334678999999999852 234788999999999999999999999766544333322110 00
Q ss_pred cCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCC
Q 012233 367 MNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (468)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f 423 (468)
+ ......++.++.+||.+||+.||.+||++.|++.||||
T Consensus 244 ----------~--------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~ 282 (282)
T cd06636 244 ----------P--------KLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI 282 (282)
T ss_pred ----------C--------CCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence 0 00123478899999999999999999999999999998
No 211
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=6e-41 Score=321.37 Aligned_cols=251 Identities=26% Similarity=0.387 Sum_probs=197.8
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeecc----cchHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD----KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLV 213 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~----~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv 213 (468)
+|.+.+.||+|+||.||+|.+..+++.||+|++... .....+|+.+++.++||||+++++.+. ....+++|
T Consensus 10 ~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~-----~~~~~~iv 84 (267)
T cd06646 10 DYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYL-----SREKLWIC 84 (267)
T ss_pred hcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEE-----eCCEEEEE
Confidence 599999999999999999999999999999988543 223557999999999999999999884 33468899
Q ss_pred eecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCCC
Q 012233 214 LEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPG 293 (468)
Q Consensus 214 ~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~~ 293 (468)
|||++++.+..... ....+++..+..++.|++.||.|||+ .||+||||||+||+++.++ .++|+|||++......
T Consensus 85 ~e~~~~~~L~~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~-~~i~H~dl~p~nill~~~~-~~~l~dfg~~~~~~~~ 159 (267)
T cd06646 85 MEYCGGGSLQDIYH---VTGPLSELQIAYVCRETLQGLAYLHS-KGKMHRDIKGANILLTDNG-DVKLADFGVAAKITAT 159 (267)
T ss_pred EeCCCCCcHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCCHHHEEECCCC-CEEECcCccceeeccc
Confidence 99999765543222 23568899999999999999999998 8999999999999999887 7999999999765432
Q ss_pred C-CCccccccCCccccccccC--CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCC
Q 012233 294 E-PNISYICSRYYRAPELIFG--ATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPN 370 (468)
Q Consensus 294 ~-~~~~~~gt~~y~aPE~~~~--~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 370 (468)
. ......+++.|+|||.+.+ ...++.++|+|||||++|||++|..||......+....+..
T Consensus 160 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~---------------- 223 (267)
T cd06646 160 IAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK---------------- 223 (267)
T ss_pred ccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeec----------------
Confidence 2 2334578899999998742 33477899999999999999999999965543332221111
Q ss_pred CccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCC
Q 012233 371 YTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPF 422 (468)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~ 422 (468)
..+..+... ....++..+.+||++||..||.+|||++++++|+|
T Consensus 224 -~~~~~~~~~-------~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l~ 267 (267)
T cd06646 224 -SNFQPPKLK-------DKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHLF 267 (267)
T ss_pred -CCCCCCCCc-------cccccCHHHHHHHHHHhhCChhhCcCHHHHhcCCC
Confidence 000101000 11246889999999999999999999999999998
No 212
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=5.7e-41 Score=323.94 Aligned_cols=256 Identities=27% Similarity=0.383 Sum_probs=204.8
Q ss_pred cceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc----chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEE
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNL 212 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~l 212 (468)
++|.+.+.||.|+||.||++.+..++..||+|.+.... ....+|+.+++.++||||+++++.+. ....+|+
T Consensus 5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~l 79 (280)
T cd06611 5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYF-----YENKLWI 79 (280)
T ss_pred hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEe-----cCCeEEE
Confidence 45999999999999999999998899999999885432 23446999999999999999999884 3446899
Q ss_pred EeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCC
Q 012233 213 VLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP 292 (468)
Q Consensus 213 v~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~ 292 (468)
||||++++.+..... .....+++..++.++.|++.||.|||+ .||+|+||||+||+++.++ .++|+|||++.....
T Consensus 80 v~e~~~~~~L~~~~~--~~~~~l~~~~~~~~~~ql~~~l~~lh~-~~i~h~dl~p~nili~~~~-~~~l~d~g~~~~~~~ 155 (280)
T cd06611 80 LIEFCDGGALDSIML--ELERGLTEPQIRYVCRQMLEALNFLHS-HKVIHRDLKAGNILLTLDG-DVKLADFGVSAKNKS 155 (280)
T ss_pred EeeccCCCcHHHHHH--HhcCCCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCChhhEEECCCC-CEEEccCccchhhcc
Confidence 999999865543322 223568999999999999999999998 8999999999999999888 799999999865533
Q ss_pred CC-CCccccccCCccccccccC----CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhc
Q 012233 293 GE-PNISYICSRYYRAPELIFG----ATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCM 367 (468)
Q Consensus 293 ~~-~~~~~~gt~~y~aPE~~~~----~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 367 (468)
.. ......+++.|+|||++.. ...++.++|+|||||++|+|++|+.||...+....+.++.... +
T Consensus 156 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~--~-------- 225 (280)
T cd06611 156 TLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSE--P-------- 225 (280)
T ss_pred cccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCC--C--------
Confidence 22 2234568999999999742 2336789999999999999999999998776555444432210 0
Q ss_pred CCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCC
Q 012233 368 NPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLR 427 (468)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~ 427 (468)
+ .+ ..+..++.++.+||.+||+.||.+||++.++++||||....
T Consensus 226 -~---~~------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~ 269 (280)
T cd06611 226 -P---TL------------DQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSDQS 269 (280)
T ss_pred -C---Cc------------CCcccCCHHHHHHHHHHhccChhhCcCHHHHhcChhhcccc
Confidence 0 00 01234788999999999999999999999999999998763
No 213
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-43 Score=322.31 Aligned_cols=253 Identities=28% Similarity=0.401 Sum_probs=208.5
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeecc--cchHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEEEee
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD--KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVLE 215 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~--~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv~e 215 (468)
.|.++..||+|+||.||+|.++.+|..+|||++.-+ ....-+|+.||+++..|++|++|+.|+-..+ ++||||
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sD-----LWIVME 108 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSD-----LWIVME 108 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccchHHHHHHHHHHHHHcCCchhhhhhhhhccCCc-----eEeehh
Confidence 388889999999999999999999999999998654 3445579999999999999999999976665 999999
Q ss_pred cccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCCC-C
Q 012233 216 YISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPG-E 294 (468)
Q Consensus 216 ~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~~-~ 294 (468)
||+.|....+... .++.+.+.++..++...+.||.|||. ..-||||||..|||++.+| ..||+|||.|..+.+. .
T Consensus 109 YCGAGSiSDI~R~--R~K~L~E~EIs~iL~~TLKGL~YLH~-~~KIHRDIKAGNILLNT~G-~AKLADFGVAGQLTDTMA 184 (502)
T KOG0574|consen 109 YCGAGSISDIMRA--RRKPLSEQEISAVLRDTLKGLQYLHD-LKKIHRDIKAGNILLNTDG-IAKLADFGVAGQLTDTMA 184 (502)
T ss_pred hcCCCcHHHHHHH--hcCCccHHHHHHHHHHHHhHHHHHHH-HHHHHhhcccccEEEcccc-hhhhhhccccchhhhhHH
Confidence 9996644443332 25779999999999999999999998 6889999999999999999 5999999999766432 3
Q ss_pred CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCCccC
Q 012233 295 PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEF 374 (468)
Q Consensus 295 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 374 (468)
...+.+|||.|||||++..- .|+.++||||||+...||.-|++||.+..+...+..|- ..|++
T Consensus 185 KRNTVIGTPFWMAPEVI~EI-GY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMIP---T~PPP------------- 247 (502)
T KOG0574|consen 185 KRNTVIGTPFWMAPEVIEEI-GYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIP---TKPPP------------- 247 (502)
T ss_pred hhCccccCcccccHHHHHHh-ccchhhhHhhhcchhhhhhcCCCCcccccccceeEecc---CCCCC-------------
Confidence 45678999999999999654 49999999999999999999999998766554333221 11110
Q ss_pred CCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCC
Q 012233 375 KFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDL 426 (468)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~ 426 (468)
.|. -++..+.++.|||++||.++|++|.||.++++|||+++-
T Consensus 248 TF~----------KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~FiknA 289 (502)
T KOG0574|consen 248 TFK----------KPEEWSSEFNDFIRSCLIKKPEERKTALRLCEHTFIKNA 289 (502)
T ss_pred CCC----------ChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhhhhhcCC
Confidence 111 123457889999999999999999999999999999873
No 214
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=6.9e-41 Score=319.29 Aligned_cols=247 Identities=30% Similarity=0.467 Sum_probs=203.8
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc-------chHHHHHHHHHHcCCCCcccccceeeecCCCCceEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYL 210 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~ 210 (468)
+|++.+.||.|+||.||+|.+..+++.||+|++.+.. ....+|+++++.++||||+++++++ .+....
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~ 75 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSF-----QDEENM 75 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhh-----cCCCeE
Confidence 4899999999999999999999999999999886432 3445799999999999999999988 555579
Q ss_pred EEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCcccc
Q 012233 211 NLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (468)
Q Consensus 211 ~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~ 290 (468)
|+|+||+.++.+..... ....+++..+..++.||+.||.|||+ +||+|+||+|+||+++.++ .++|+|||.+...
T Consensus 76 ~lv~e~~~~~~L~~~l~---~~~~l~~~~~~~~~~~i~~~l~~lh~-~~i~h~dl~~~nil~~~~~-~~~l~d~~~~~~~ 150 (258)
T cd05578 76 YLVVDLLLGGDLRYHLS---QKVKFSEEQVKFWICEIVLALEYLHS-KGIIHRDIKPDNILLDEQG-HVHITDFNIATKV 150 (258)
T ss_pred EEEEeCCCCCCHHHHHH---hcCCcCHHHHHHHHHHHHHHHHHHHh-CCeeccCCCHHHeEEcCCC-CEEEeeccccccc
Confidence 99999998875543222 13568899999999999999999998 8999999999999999888 7999999998776
Q ss_pred CCCCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCc--HHHHHHHHHHhCCCCHHHHhhcC
Q 012233 291 VPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESG--VDQLVEIIKILGTPTREEIKCMN 368 (468)
Q Consensus 291 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~--~~~~~~i~~~~~~~~~~~~~~~~ 368 (468)
..........|+..|+|||.+.+.. ++.++|+|||||++|+|++|..||...+. .+.+.+....
T Consensus 151 ~~~~~~~~~~~~~~y~~PE~~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~------------- 216 (258)
T cd05578 151 TPDTLTTSTSGTPGYMAPEVLCRQG-YSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQET------------- 216 (258)
T ss_pred CCCccccccCCChhhcCHHHHcccC-CCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhcc-------------
Confidence 5544444567889999999986554 89999999999999999999999987764 2222221110
Q ss_pred CCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCH--HHHhCCCCC
Q 012233 369 PNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTA--LEACAHPFF 423 (468)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~--~ell~hp~f 423 (468)
....++..++.++.++|.+||+.||.+||++ .|+++||||
T Consensus 217 ---------------~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~~~~ 258 (258)
T cd05578 217 ---------------ADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKNHPYF 258 (258)
T ss_pred ---------------ccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHhcCCCC
Confidence 0011334578999999999999999999999 999999998
No 215
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-42 Score=338.51 Aligned_cols=249 Identities=29% Similarity=0.448 Sum_probs=210.5
Q ss_pred eEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc-------chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEE
Q 012233 139 YMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (468)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~ 211 (468)
|.-.+.||.|+||.||.|++..+.+.||||++.-.. ..+.+|+..|+++.|||++.+.+||. .+...|
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyL-----re~TaW 102 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYL-----REHTAW 102 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceee-----ccchHH
Confidence 777789999999999999999999999999984332 23347999999999999999999994 444588
Q ss_pred EEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccC
Q 012233 212 LVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (468)
Q Consensus 212 lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~ 291 (468)
||||||-|+--+++.-. .+++-+..+..|+.+.+.||+|||+ ++.||||||..|||++..+ .|||+|||.|....
T Consensus 103 LVMEYClGSAsDlleVh---kKplqEvEIAAi~~gaL~gLaYLHS-~~~IHRDiKAGNILLse~g-~VKLaDFGSAsi~~ 177 (948)
T KOG0577|consen 103 LVMEYCLGSASDLLEVH---KKPLQEVEIAAITHGALQGLAYLHS-HNRIHRDIKAGNILLSEPG-LVKLADFGSASIMA 177 (948)
T ss_pred HHHHHHhccHHHHHHHH---hccchHHHHHHHHHHHHHHHHHHHH-hhHHhhhccccceEecCCC-eeeeccccchhhcC
Confidence 99999998766655432 4668888899999999999999998 8999999999999999888 79999999997653
Q ss_pred CCCCCccccccCCcccccccc--CCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCC
Q 012233 292 PGEPNISYICSRYYRAPELIF--GATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP 369 (468)
Q Consensus 292 ~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 369 (468)
+..+++|||+|||||++. ..+.|+-++||||||++..||.-.++|+.+.+.+..+..|.+.-
T Consensus 178 ---PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNe------------- 241 (948)
T KOG0577|consen 178 ---PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNE------------- 241 (948)
T ss_pred ---chhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcC-------------
Confidence 456899999999999984 44569999999999999999999999999998888888876621
Q ss_pred CCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCC
Q 012233 370 NYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLR 427 (468)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~ 427 (468)
-|.+.. ...+..+..||..||++-|.+|||.+++|.|+|...-+
T Consensus 242 ------sPtLqs--------~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~fv~R~R 285 (948)
T KOG0577|consen 242 ------SPTLQS--------NEWSDYFRNFVDSCLQKIPQERPTSEELLKHRFVLRER 285 (948)
T ss_pred ------CCCCCC--------chhHHHHHHHHHHHHhhCcccCCcHHHHhhcchhccCC
Confidence 111122 23477899999999999999999999999999986543
No 216
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=4e-41 Score=327.38 Aligned_cols=257 Identities=28% Similarity=0.403 Sum_probs=206.3
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc----chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLV 213 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv 213 (468)
.|.....||+|+||.||++.+..++..||||.+.... ....+|+.+++.++|+||+++++.+. ...+.|+|
T Consensus 23 ~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~-----~~~~~~lv 97 (292)
T cd06658 23 YLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYL-----VGDELWVV 97 (292)
T ss_pred HHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHhee-----cCCeEEEE
Confidence 3555677999999999999999899999999875432 23457999999999999999999883 34468999
Q ss_pred eecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCCC
Q 012233 214 LEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPG 293 (468)
Q Consensus 214 ~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~~ 293 (468)
|||++++.+..... ...+++..+..++.||+.||.|||+ +||+||||||+||+++.++ .++|+|||++......
T Consensus 98 ~e~~~~~~L~~~~~----~~~l~~~~~~~~~~qi~~~l~~LH~-~~ivH~dlkp~Nill~~~~-~~kL~dfg~~~~~~~~ 171 (292)
T cd06658 98 MEFLEGGALTDIVT----HTRMNEEQIATVCLSVLRALSYLHN-QGVIHRDIKSDSILLTSDG-RIKLSDFGFCAQVSKE 171 (292)
T ss_pred EeCCCCCcHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHH-CCEeecCCCHHHEEEcCCC-CEEEccCcchhhcccc
Confidence 99999876654332 2457889999999999999999998 8999999999999999887 7999999998755332
Q ss_pred C-CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCCc
Q 012233 294 E-PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYT 372 (468)
Q Consensus 294 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 372 (468)
. ......++..|+|||.+.+. .++.++|+|||||++|||++|..||...+....+..+......
T Consensus 172 ~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~-------------- 236 (292)
T cd06658 172 VPKRKSLVGTPYWMAPEVISRL-PYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPP-------------- 236 (292)
T ss_pred cccCceeecCccccCHHHHccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCC--------------
Confidence 2 22345789999999998654 4899999999999999999999999877665544433221100
Q ss_pred cCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCCCCCCC
Q 012233 373 EFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNTC 432 (468)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~~~~~~ 432 (468)
.++ ....++..+.+||.+||..||.+|||+.++++||||+....+++.
T Consensus 237 --~~~----------~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~~~~~~~~~ 284 (292)
T cd06658 237 --RVK----------DSHKVSSVLRGFLDLMLVREPSQRATAQELLQHPFLKLAGPPSCI 284 (292)
T ss_pred --ccc----------cccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhhccCCcccc
Confidence 000 112368889999999999999999999999999999998888753
No 217
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=1.3e-40 Score=322.41 Aligned_cols=241 Identities=18% Similarity=0.227 Sum_probs=192.6
Q ss_pred ceecccCceEEEEEEEcCCCCEEEEEEeeccc-------chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEEEee
Q 012233 143 RVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVLE 215 (468)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv~e 215 (468)
..||+|++|.||+|.+ +|+.||||.+.... ..+.+|+.+|++++||||+++++++.... .+..++++|||
T Consensus 26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~-~~~~~~~lv~E 102 (283)
T PHA02988 26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIV-DDLPRLSLILE 102 (283)
T ss_pred eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecc-cCCCceEEEEE
Confidence 4699999999999998 78999999885432 23458999999999999999999885422 22346889999
Q ss_pred cccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCCCCC
Q 012233 216 YISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGEP 295 (468)
Q Consensus 216 ~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~~~~ 295 (468)
|+.++.+.... .....+++.....++.|++.||.|||+..+++||||||+|||++.++ .+||+|||+++.... .
T Consensus 103 y~~~g~L~~~l---~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~-~~kl~dfg~~~~~~~--~ 176 (283)
T PHA02988 103 YCTRGYLREVL---DKEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENY-KLKIICHGLEKILSS--P 176 (283)
T ss_pred eCCCCcHHHHH---hhCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCC-cEEEcccchHhhhcc--c
Confidence 99987554332 22456888889999999999999999735999999999999999888 799999999976532 2
Q ss_pred CccccccCCccccccccCC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCCccC
Q 012233 296 NISYICSRYYRAPELIFGA-TEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEF 374 (468)
Q Consensus 296 ~~~~~gt~~y~aPE~~~~~-~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 374 (468)
.....++..|+|||++.+. ..++.++|||||||++|||++|..||.+.+..+.+..+...... .
T Consensus 177 ~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~---------------~ 241 (283)
T PHA02988 177 PFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNS---------------L 241 (283)
T ss_pred cccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCC---------------C
Confidence 2345788999999998652 35899999999999999999999999987766555544431111 0
Q ss_pred CCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 375 KFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
. ++..+++++++||.+||+.||.+|||+.+++.
T Consensus 242 ~------------~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 274 (283)
T PHA02988 242 K------------LPLDCPLEIKCIVEACTSHDSIKRPNIKEILY 274 (283)
T ss_pred C------------CCCcCcHHHHHHHHHHhcCCcccCcCHHHHHH
Confidence 1 22347889999999999999999999999975
No 218
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=9.7e-41 Score=319.91 Aligned_cols=252 Identities=24% Similarity=0.376 Sum_probs=198.3
Q ss_pred cceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc----chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEE
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNL 212 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~l 212 (468)
.+|.+.+.||+|+||.||+|.+..+++.||+|.+.... ....+|+.+++.++||||+++++.+. ....+|+
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~-----~~~~~~l 83 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYL-----RRDKLWI 83 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEE-----eCCEEEE
Confidence 36999999999999999999999999999999885432 23457999999999999999999883 3446899
Q ss_pred EeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCC
Q 012233 213 VLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP 292 (468)
Q Consensus 213 v~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~ 292 (468)
||||++++.+.... .....+++..++.++.|++.||.|||+ .||+|+||||+||+++.++ .++|+|||++.....
T Consensus 84 v~e~~~~~~L~~~~---~~~~~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dlkp~nili~~~~-~~~l~dfg~~~~~~~ 158 (267)
T cd06645 84 CMEFCGGGSLQDIY---HVTGPLSESQIAYVSRETLQGLYYLHS-KGKMHRDIKGANILLTDNG-HVKLADFGVSAQITA 158 (267)
T ss_pred EEeccCCCcHHHHH---HhcCCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEECCCC-CEEECcceeeeEccC
Confidence 99999976554322 224568999999999999999999998 8999999999999999887 799999999875532
Q ss_pred CC-CCccccccCCcccccccc--CCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCC
Q 012233 293 GE-PNISYICSRYYRAPELIF--GATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP 369 (468)
Q Consensus 293 ~~-~~~~~~gt~~y~aPE~~~--~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 369 (468)
.. ......|+..|+|||++. ....++.++|+|||||++|+|++|..||........+..+...
T Consensus 159 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~-------------- 224 (267)
T cd06645 159 TIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKS-------------- 224 (267)
T ss_pred cccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhcc--------------
Confidence 22 223457899999999874 2234788999999999999999999999765544333322111
Q ss_pred CCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCC
Q 012233 370 NYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPF 422 (468)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~ 422 (468)
.+..+... ....++..+.+||.+||..||.+||++.++++|||
T Consensus 225 ---~~~~~~~~-------~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~~~ 267 (267)
T cd06645 225 ---NFQPPKLK-------DKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQHPF 267 (267)
T ss_pred ---CCCCCccc-------ccCCCCHHHHHHHHHHccCCchhCcCHHHHhcCCC
Confidence 00000000 01136788999999999999999999999999999
No 219
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=1.5e-40 Score=316.24 Aligned_cols=251 Identities=28% Similarity=0.418 Sum_probs=202.5
Q ss_pred cceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc--chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEEEe
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK--RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVL 214 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~--~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv~ 214 (468)
++|.+.+.||+|+||.||+|.+..++..|++|.+.... ..+.+|+.+++.++|+||+++++++. ...++|+++
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~-----~~~~~~l~~ 77 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEEDLQEIIKEISILKQCDSPYIVKYYGSYF-----KNTDLWIVM 77 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHHHHHHHHHHHHHHhCCCCcEeeeeeeee-----cCCcEEEEE
Confidence 35999999999999999999998889999999886543 44568999999999999999999884 345689999
Q ss_pred ecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCCCC
Q 012233 215 EYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGE 294 (468)
Q Consensus 215 e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~~~ 294 (468)
||++++.+.... ......+++..++.++.|++.||.|||+ .||+|+||+|+||+++.++ .++|+|||++.......
T Consensus 78 e~~~~~~L~~~l--~~~~~~l~~~~~~~~~~~l~~~l~~lh~-~~i~H~dl~~~ni~~~~~~-~~~l~dfg~~~~~~~~~ 153 (256)
T cd06612 78 EYCGAGSVSDIM--KITNKTLTEEEIAAILYQTLKGLEYLHS-NKKIHRDIKAGNILLNEEG-QAKLADFGVSGQLTDTM 153 (256)
T ss_pred ecCCCCcHHHHH--HhCccCCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCcceEEECCCC-cEEEcccccchhcccCc
Confidence 999976554332 1224568899999999999999999998 8999999999999999888 79999999988664433
Q ss_pred -CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCCcc
Q 012233 295 -PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTE 373 (468)
Q Consensus 295 -~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 373 (468)
......++..|+|||++.+. .++.++|||||||++|+|++|+.||...........+... . ...
T Consensus 154 ~~~~~~~~~~~y~~PE~~~~~-~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~---~-----------~~~ 218 (256)
T cd06612 154 AKRNTVIGTPFWMAPEVIQEI-GYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNK---P-----------PPT 218 (256)
T ss_pred cccccccCCccccCHHHHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccC---C-----------CCC
Confidence 22334578899999998665 4899999999999999999999999876544332221110 0 000
Q ss_pred CCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCC
Q 012233 374 FKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (468)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f 423 (468)
+ ..+..++.++.++|.+||+.||.+|||+.++|.||||
T Consensus 219 ~------------~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~~~~ 256 (256)
T cd06612 219 L------------SDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQHPFI 256 (256)
T ss_pred C------------CchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcCCCC
Confidence 0 0123467899999999999999999999999999998
No 220
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=2.7e-40 Score=315.45 Aligned_cols=252 Identities=25% Similarity=0.424 Sum_probs=203.5
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc------chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~ 211 (468)
+|.+.+.||.|+||.||++.+..+|..||+|.+.... ....+|+.+++.++||||+++++++.. .....++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~---~~~~~~~ 77 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIID---RSNQTLY 77 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeec---CCCCEEE
Confidence 4889999999999999999999999999999885422 233468999999999999999987753 2334578
Q ss_pred EEeecccch-HHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhH-----hcCCccccCCCCCCeeecCCCCcEEEeeec
Q 012233 212 LVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLH-----HVVGVCHRDIKPQNLLVNPHTHQLKICDFG 285 (468)
Q Consensus 212 lv~e~~~~~-ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH-----~~~givHrDlkp~NILl~~~~~~vkL~DFG 285 (468)
++|||++++ +...+.........+++..++.++.||+.||.||| + .+|+|+||||+||+++.++ .+||+|||
T Consensus 78 ~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~-~~i~h~dl~p~nili~~~~-~~kl~d~g 155 (265)
T cd08217 78 IVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPG-NTVLHRDLKPANIFLDANN-NVKLGDFG 155 (265)
T ss_pred EEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCcccc-CcceecCCCHHHEEEecCC-CEEEeccc
Confidence 999999865 44444444444567899999999999999999999 7 7999999999999999887 79999999
Q ss_pred CccccCCCCC-CccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHH
Q 012233 286 SAKMLVPGEP-NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEI 364 (468)
Q Consensus 286 ~a~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 364 (468)
++........ .....+++.|+|||.+.+.. ++.++|+||||+++|+|++|+.||...+.......+...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--------- 225 (265)
T cd08217 156 LAKILGHDSSFAKTYVGTPYYMSPEQLNHMS-YDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEG--------- 225 (265)
T ss_pred ccccccCCcccccccccCCCccChhhhcCCC-CCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhcC---------
Confidence 9987654432 33457899999999986544 889999999999999999999999877643332222110
Q ss_pred hhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCC
Q 012233 365 KCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (468)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f 423 (468)
.++ .++..++.++.+++.+||+.+|.+||++.+++.|||+
T Consensus 226 ----------~~~---------~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~~~ 265 (265)
T cd08217 226 ----------KFR---------RIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQLPLI 265 (265)
T ss_pred ----------CCC---------CCccccCHHHHHHHHHHccCCcccCCCHHHHhhCCCC
Confidence 001 1334578899999999999999999999999999996
No 221
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=3e-40 Score=323.15 Aligned_cols=255 Identities=29% Similarity=0.477 Sum_probs=202.1
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc-------chHHHHHHHHHHcCCCCcccccceeeecCCCCceEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYL 210 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~ 210 (468)
+|.+.+.||+|+||.||++.+..+++.||+|.+.... ....+|+.+++.++||||+++++.+ ....++
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~~ 76 (305)
T cd05609 2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSF-----ETKRHL 76 (305)
T ss_pred CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEE-----ecCCEE
Confidence 5999999999999999999999999999999885432 2334789999999999999999888 344568
Q ss_pred EEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCcccc
Q 012233 211 NLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (468)
Q Consensus 211 ~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~ 290 (468)
++||||+.++.+.... .....+++..+..++.|++.||.|||+ .||+||||||+|||++.++ .++|+|||+++..
T Consensus 77 ~lv~e~~~g~~L~~~l---~~~~~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dl~p~NIll~~~~-~~~l~dfg~~~~~ 151 (305)
T cd05609 77 CMVMEYVEGGDCATLL---KNIGALPVDMARMYFAETVLALEYLHN-YGIVHRDLKPDNLLITSMG-HIKLTDFGLSKIG 151 (305)
T ss_pred EEEEecCCCCcHHHHH---HHcCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCchHHEEECCCC-CEEEeeCCCcccc
Confidence 9999999976554322 223568899999999999999999998 8999999999999999887 7999999998632
Q ss_pred CCCC----------------CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHH
Q 012233 291 VPGE----------------PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIK 354 (468)
Q Consensus 291 ~~~~----------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~ 354 (468)
.... ......++..|+|||.+.+. .++.++|+|||||++|||++|..||.+.+..+....+..
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~ 230 (305)
T cd05609 152 LMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQ-GYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVIS 230 (305)
T ss_pred CcCccccccccccccchhhccccCCccCccccCchhccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Confidence 1000 01124578889999998654 489999999999999999999999987766554444433
Q ss_pred HhCCCCHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCC---HHHHhCCCCCCCCCCC
Q 012233 355 ILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCT---ALEACAHPFFDDLRDP 429 (468)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s---~~ell~hp~f~~~~~~ 429 (468)
.. ..++. ....++.++.++|.+||+.||.+||+ +.++++||||...+-.
T Consensus 231 ~~-----------------~~~~~---------~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~~~~~ 282 (305)
T cd05609 231 DD-----------------IEWPE---------GDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLGLDWN 282 (305)
T ss_pred cc-----------------cCCCC---------ccccCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccCCCHH
Confidence 10 01110 11247889999999999999999997 7999999999775443
No 222
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=2e-40 Score=316.83 Aligned_cols=245 Identities=30% Similarity=0.484 Sum_probs=197.7
Q ss_pred ecccCceEEEEEEEcCCCCEEEEEEeeccc-------chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEEEeecc
Q 012233 145 VGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVLEYI 217 (468)
Q Consensus 145 lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv~e~~ 217 (468)
||.|+||.||+|.+..+++.||+|++.... ..+.+|+.+++.++||||+++++.+ .+...+|+||||+
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~lv~e~~ 75 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTF-----KDKKYIYMLMEYC 75 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeE-----EcCCccEEEEecC
Confidence 699999999999998889999999985432 2345799999999999999999987 3444689999999
Q ss_pred cchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCCCCCCc
Q 012233 218 SETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGEPNI 297 (468)
Q Consensus 218 ~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~~~~~~ 297 (468)
.++.+.... .....++...+..++.||+.||.|||+ .|++|+||||+||+++.++ .++|+|||++..........
T Consensus 76 ~~~~L~~~l---~~~~~l~~~~~~~~~~~i~~~l~~lH~-~~~~h~dl~~~nilv~~~~-~~~l~df~~~~~~~~~~~~~ 150 (262)
T cd05572 76 LGGELWTIL---RDRGLFDEYTARFYIACVVLAFEYLHN-RGIIYRDLKPENLLLDSNG-YVKLVDFGFAKKLKSGQKTW 150 (262)
T ss_pred CCCcHHHHH---hhcCCCCHHHHHHHHHHHHHHHHHHhh-CCcccCCCCHHHEEEcCCC-CEEEeeCCcccccCcccccc
Confidence 865443222 113458889999999999999999998 8999999999999999888 79999999998765543344
Q ss_pred cccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCC--cHHHHHHHHHHhCCCCHHHHhhcCCCCccCC
Q 012233 298 SYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGES--GVDQLVEIIKILGTPTREEIKCMNPNYTEFK 375 (468)
Q Consensus 298 ~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 375 (468)
...+++.|++||.+.+. .++.++|+|||||++|+|++|..||.... ..+.+.++.... ....
T Consensus 151 ~~~~~~~~~~PE~~~~~-~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~---------------~~~~ 214 (262)
T cd05572 151 TFCGTPEYVAPEIILNK-GYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGN---------------GKLE 214 (262)
T ss_pred cccCCcCccChhHhcCC-CCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccC---------------CCCC
Confidence 56789999999998654 48999999999999999999999998765 333333332100 1111
Q ss_pred CCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCC-----HHHHhCCCCCCCCC
Q 012233 376 FPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCT-----ALEACAHPFFDDLR 427 (468)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s-----~~ell~hp~f~~~~ 427 (468)
++...++++.++|.+||+.||.+|++ +.|+++||||+++.
T Consensus 215 ------------~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~ 259 (262)
T cd05572 215 ------------FPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNGFD 259 (262)
T ss_pred ------------CCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcChhhhCCC
Confidence 23345889999999999999999999 99999999999864
No 223
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=100.00 E-value=5e-42 Score=301.98 Aligned_cols=285 Identities=31% Similarity=0.613 Sum_probs=232.2
Q ss_pred cceEEeceecccCceEEEEEEEcCCCCEEEEEEeecc-cchHHHHHHHHHHcC-CCCcccccceeeecCCCCceEEEEEe
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD-KRYKNRELQIMRLLN-HPNVVSLKHCFFSTTEKDELYLNLVL 214 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~-~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~~~~~~lv~ 214 (468)
++|++.+.+|+|-|+.||.|.+..+.+.++||+++.. .....+|+.||+.|. ||||++|++..-... .....||+
T Consensus 38 ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~---SktpaLiF 114 (338)
T KOG0668|consen 38 DDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVKKKKIKREIKILQNLRGGPNIIKLLDIVKDPE---SKTPSLIF 114 (338)
T ss_pred chHHHHHHHcCccHhhHhcccccCCCceEEEeeechHHHHHHHHHHHHHHhccCCCCeeehhhhhcCcc---ccCchhHh
Confidence 4699999999999999999999999999999988643 345678999999997 999999999874433 23456899
Q ss_pred ecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCCCC
Q 012233 215 EYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGE 294 (468)
Q Consensus 215 e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~~~ 294 (468)
||+...-... .-..++...++.++.|++.||.|+|+ .||+|||+||.|++||.....++|+|+|+|.+..++.
T Consensus 115 E~v~n~Dfk~------ly~tl~d~dIryY~~elLkALdyCHS-~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~ 187 (338)
T KOG0668|consen 115 EYVNNTDFKQ------LYPTLTDYDIRYYIYELLKALDYCHS-MGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK 187 (338)
T ss_pred hhhccccHHH------HhhhhchhhHHHHHHHHHHHHhHHHh-cCcccccCCcceeeechhhceeeeeecchHhhcCCCc
Confidence 9998753321 12446667799999999999999998 8999999999999999887789999999999998888
Q ss_pred CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCC-CCCCcHHHHHHHHHHhCCCCHHHHh-----hcC
Q 012233 295 PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLF-PGESGVDQLVEIIKILGTPTREEIK-----CMN 368 (468)
Q Consensus 295 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf-~~~~~~~~~~~i~~~~~~~~~~~~~-----~~~ 368 (468)
.-.-.+.+.+|--||.+.....|+...|+|||||++..|+..+-|| .+.++.+++.+|.+.+|+....... ..+
T Consensus 188 eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ld 267 (338)
T KOG0668|consen 188 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLD 267 (338)
T ss_pred eeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCC
Confidence 7777888999999999988888999999999999999999987775 6789999999999999875432221 123
Q ss_pred CCCccCCCCcccCCCccccccc----CCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCCCCCCC
Q 012233 369 PNYTEFKFPQIKAHPWHKIFHK----RMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNTC 432 (468)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~~~~~~ 432 (468)
|.|..+- ......+|....+. -+++++.||+.++|.+|-.+|+||.|++.||||..++....+
T Consensus 268 p~~~~i~-~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF~~~~~~~~~ 334 (338)
T KOG0668|consen 268 PQFEDIL-GRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAPVREAESS 334 (338)
T ss_pred hhHhhHh-hccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCchHHHHHHHhhc
Confidence 3333321 12233456555432 356999999999999999999999999999999987765444
No 224
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-41 Score=302.21 Aligned_cols=256 Identities=28% Similarity=0.386 Sum_probs=202.8
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeec----ccchHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQ----DKRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLV 213 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~----~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv 213 (468)
+|++.+.||+|||+.||+++...++..||+|++.- +.....+|++..++++||||++++++............||+
T Consensus 22 Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~yll 101 (302)
T KOG2345|consen 22 RYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAYLL 101 (302)
T ss_pred eEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEEEE
Confidence 69999999999999999999999999999998843 33445679999999999999999998866655567789999
Q ss_pred eecccc-hHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCC--ccccCCCCCCeeecCCCCcEEEeeecCcccc
Q 012233 214 LEYISE-TVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVG--VCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (468)
Q Consensus 214 ~e~~~~-~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~g--ivHrDlkp~NILl~~~~~~vkL~DFG~a~~~ 290 (468)
++|... ++++.+......+..+++.++..|+.+|++||++||. .. ++||||||.|||+...+ .++|.|||.++..
T Consensus 102 ~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~-~~~~yAH~DiKP~NILls~~~-~~vl~D~GS~~~a 179 (302)
T KOG2345|consen 102 LPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHE-KEPPYAHRDIKPANILLSDSG-LPVLMDLGSATQA 179 (302)
T ss_pred eehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhc-cCCcccccCCCcceeEecCCC-ceEEEeccCcccc
Confidence 999984 5778777777777789999999999999999999997 77 99999999999999877 7999999998754
Q ss_pred CCCCC----------CccccccCCccccccccCC--CCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCC
Q 012233 291 VPGEP----------NISYICSRYYRAPELIFGA--TEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGT 358 (468)
Q Consensus 291 ~~~~~----------~~~~~gt~~y~aPE~~~~~--~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~ 358 (468)
.-... .....+|..|+|||.+.-. ...++++|||||||+||+|+.|.-||... .+..+.
T Consensus 180 ~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~---------~~~GgS 250 (302)
T KOG2345|consen 180 PIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERI---------YQQGGS 250 (302)
T ss_pred ceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHH---------hhcCCe
Confidence 21111 1134579999999998432 23788999999999999999999999431 111111
Q ss_pred CCHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCC
Q 012233 359 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAH 420 (468)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~h 420 (468)
-... -.-..+.+|. ...+|+.+.+||+.||+.||.+||++.+++.+
T Consensus 251 laLA------v~n~q~s~P~----------~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~ 296 (302)
T KOG2345|consen 251 LALA------VQNAQISIPN----------SSRYSEALHQLIKSMLQVDPNQRPTIPELLSK 296 (302)
T ss_pred EEEe------eeccccccCC----------CCCccHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence 0000 0001233332 13478999999999999999999999999863
No 225
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=2.1e-40 Score=320.26 Aligned_cols=245 Identities=25% Similarity=0.378 Sum_probs=189.9
Q ss_pred eecccCceEEEEEEEcCCCCEEEEEEeeccc-------chHHHHHHHHHH---cCCCCcccccceeeecCCCCceEEEEE
Q 012233 144 VVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRL---LNHPNVVSLKHCFFSTTEKDELYLNLV 213 (468)
Q Consensus 144 ~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-------~~~~~E~~il~~---l~hpnIv~l~~~~~~~~~~~~~~~~lv 213 (468)
+||+|+||.||++.+..+++.||+|.+.+.. ....+|..+++. ..||||+.+++++. .....++|
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-----~~~~~~lv 75 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFH-----TPDKLCFI 75 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEe-----cCCeEEEE
Confidence 4899999999999999999999999885432 112234433333 47999999988883 33458899
Q ss_pred eecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCCC
Q 012233 214 LEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPG 293 (468)
Q Consensus 214 ~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~~ 293 (468)
|||+.++.+... ......+++..+..++.|++.||.|||+ .||+||||||+|||++.++ .++|+|||++......
T Consensus 76 ~e~~~~~~L~~~---i~~~~~l~~~~~~~i~~qi~~al~~lH~-~~ivH~dikp~Nil~~~~~-~~~l~dfg~~~~~~~~ 150 (279)
T cd05633 76 LDLMNGGDLHYH---LSQHGVFSEKEMRFYATEIILGLEHMHN-RFVVYRDLKPANILLDEHG-HVRISDLGLACDFSKK 150 (279)
T ss_pred EecCCCCCHHHH---HHhcCCCCHHHHHHHHHHHHHHHHHHHH-CCcCCCCCCHHHEEECCCC-CEEEccCCcceecccc
Confidence 999997755432 2234568999999999999999999998 8999999999999999887 7999999998654322
Q ss_pred CCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHH--HHHHHHHHhCCCCHHHHhhcCCCC
Q 012233 294 EPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVD--QLVEIIKILGTPTREEIKCMNPNY 371 (468)
Q Consensus 294 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~ 371 (468)
......|++.|+|||.+.+...++.++|+|||||++|+|++|..||....... .+......
T Consensus 151 -~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~---------------- 213 (279)
T cd05633 151 -KPHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLT---------------- 213 (279)
T ss_pred -CccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhhc----------------
Confidence 22345789999999998654558899999999999999999999997643221 11111100
Q ss_pred ccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCC-----CHHHHhCCCCCCCCC
Q 012233 372 TEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRC-----TALEACAHPFFDDLR 427 (468)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~-----s~~ell~hp~f~~~~ 427 (468)
+...++..+++++.++|.+||..||.+|+ ++.++++||||+++.
T Consensus 214 ------------~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~~~ 262 (279)
T cd05633 214 ------------VNVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKGID 262 (279)
T ss_pred ------------CCcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccCCC
Confidence 00113345789999999999999999999 699999999999865
No 226
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=1.8e-40 Score=320.04 Aligned_cols=250 Identities=28% Similarity=0.395 Sum_probs=196.9
Q ss_pred ecccCceEEEEEEEcCCCCEEEEEEeecc-------cchHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEEEeecc
Q 012233 145 VGTGSFGVVFQAKCLETGDSVAIKKVLQD-------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVLEYI 217 (468)
Q Consensus 145 lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~-------~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv~e~~ 217 (468)
||+|+||+||+|.+..+|+.||+|.+... .....+|+++++.++||||+++++.+ ......|+||||+
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~lv~e~~ 75 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAF-----ETKDDLCLVMTLM 75 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEE-----ecCCeEEEEEecC
Confidence 68999999999999999999999988542 12234699999999999999999888 4445689999999
Q ss_pred cchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCCCCCCc
Q 012233 218 SETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGEPNI 297 (468)
Q Consensus 218 ~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~~~~~~ 297 (468)
+++.+...... .....+++..+..++.|++.||.|||+ .||+|+||+|+||+++.++ .++|+|||.+..........
T Consensus 76 ~~~~L~~~l~~-~~~~~~~~~~~~~~~~ql~~~l~~lH~-~~i~H~di~p~Nil~~~~~-~~~l~dfg~~~~~~~~~~~~ 152 (277)
T cd05577 76 NGGDLKYHIYN-VGEPGFPEARAIFYAAQIICGLEHLHQ-RRIVYRDLKPENVLLDDHG-NVRISDLGLAVELKGGKKIK 152 (277)
T ss_pred CCCcHHHHHHH-cCcCCCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCHHHEEECCCC-CEEEccCcchhhhccCCccc
Confidence 97655422211 112468999999999999999999998 8999999999999999888 79999999987664444444
Q ss_pred cccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCCccCCCC
Q 012233 298 SYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFP 377 (468)
Q Consensus 298 ~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (468)
...++..|+|||++.+.. ++.++|+|||||++|+|++|+.||...........+...... ..
T Consensus 153 ~~~~~~~y~~PE~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~-------------~~---- 214 (277)
T cd05577 153 GRAGTPGYMAPEVLQGEV-YDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLE-------------MA---- 214 (277)
T ss_pred cccCCCCcCCHHHhcCCC-CCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhcccc-------------cc----
Confidence 566788999999987655 899999999999999999999999775532211111110000 00
Q ss_pred cccCCCcccccccCCCHHHHHHHHHhcccCCCCCC-----CHHHHhCCCCCCCCCC
Q 012233 378 QIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRC-----TALEACAHPFFDDLRD 428 (468)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~-----s~~ell~hp~f~~~~~ 428 (468)
..++..+++++.++|.+||+.||.+|| ++.+++.||||.++..
T Consensus 215 --------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~~~~ 262 (277)
T cd05577 215 --------VEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKDLNW 262 (277)
T ss_pred --------ccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhChhhhcCCh
Confidence 013345789999999999999999999 8999999999987653
No 227
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=3.2e-40 Score=316.11 Aligned_cols=250 Identities=26% Similarity=0.439 Sum_probs=197.2
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc---------chHHHHHHHHHHcCCCCcccccceeeecCCCCce
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK---------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDEL 208 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~---------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 208 (468)
+|.+.+.||+|+||.||.|.+..+|..||||.+.... ....+|+.+++.+.||||+++++++... ...
T Consensus 3 ~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~~~ 79 (265)
T cd06652 3 NWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDP---MER 79 (265)
T ss_pred cceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccC---CCc
Confidence 5999999999999999999999999999999874321 2345699999999999999999977332 234
Q ss_pred EEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCcc
Q 012233 209 YLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAK 288 (468)
Q Consensus 209 ~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~ 288 (468)
++++||||++++.+.... .....+++..+..++.|++.||.|||+ .||+|+||||+|||++.++ .++|+|||++.
T Consensus 80 ~~~~v~e~~~~~~L~~~l---~~~~~~~~~~~~~~~~~l~~~l~~lH~-~~i~H~dl~p~nil~~~~~-~~~l~Dfg~~~ 154 (265)
T cd06652 80 TLSIFMEHMPGGSIKDQL---KSYGALTENVTRKYTRQILEGVSYLHS-NMIVHRDIKGANILRDSVG-NVKLGDFGASK 154 (265)
T ss_pred eEEEEEEecCCCcHHHHH---HHcCCCCHHHHHHHHHHHHHHHHHHHh-CCEecCCCCHHHEEecCCC-CEEECcCcccc
Confidence 688999999876544221 123457888899999999999999998 8999999999999999887 79999999987
Q ss_pred ccCCC----CCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHH
Q 012233 289 MLVPG----EPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEI 364 (468)
Q Consensus 289 ~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 364 (468)
..... .......++..|+|||++.+. .++.++|+|||||++|+|++|+.||........+.++.. .+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~---~~~---- 226 (265)
T cd06652 155 RLQTICLSGTGMKSVTGTPYWMSPEVISGE-GYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIAT---QPT---- 226 (265)
T ss_pred ccccccccccccccCCCCccccChhhhcCC-CCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhc---CCC----
Confidence 54321 112234688899999998764 489999999999999999999999987654444333221 110
Q ss_pred hhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCC
Q 012233 365 KCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFD 424 (468)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~ 424 (468)
...++..++..+.++|.+||. +|.+||++++++.|||+.
T Consensus 227 --------------------~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~~~~~ 265 (265)
T cd06652 227 --------------------NPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRHTFVH 265 (265)
T ss_pred --------------------CCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcCcccC
Confidence 011234567889999999995 999999999999999984
No 228
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=1.4e-40 Score=324.45 Aligned_cols=261 Identities=26% Similarity=0.411 Sum_probs=208.2
Q ss_pred eEEeceecccCceEEEEEEEcCCCCEEEEEEeecc----cchHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEEEe
Q 012233 139 YMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD----KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVL 214 (468)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~----~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv~ 214 (468)
|.....||.|+||.||+|.+..++..||+|.+... .....+|+.+++.++||||+++++++. .....|+||
T Consensus 23 ~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~-----~~~~~~iv~ 97 (297)
T cd06659 23 LENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYL-----VGEELWVLM 97 (297)
T ss_pred HHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhhee-----eCCeEEEEE
Confidence 44556799999999999999889999999988432 223457899999999999999999883 344689999
Q ss_pred ecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCCCC
Q 012233 215 EYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGE 294 (468)
Q Consensus 215 e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~~~ 294 (468)
||++++.+..... ...+++..++.++.|++.||.|||+ .||+|+||||+|||++.++ .+||+|||++.......
T Consensus 98 e~~~~~~L~~~~~----~~~~~~~~~~~~~~qi~~~L~~LH~-~~ivH~dl~p~Nill~~~~-~~kL~dfg~~~~~~~~~ 171 (297)
T cd06659 98 EFLQGGALTDIVS----QTRLNEEQIATVCESVLQALCYLHS-QGVIHRDIKSDSILLTLDG-RVKLSDFGFCAQISKDV 171 (297)
T ss_pred ecCCCCCHHHHHh----hcCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHeEEccCC-cEEEeechhHhhccccc
Confidence 9999765543321 2458899999999999999999998 8999999999999999888 79999999987553322
Q ss_pred -CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCCcc
Q 012233 295 -PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTE 373 (468)
Q Consensus 295 -~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 373 (468)
......++..|+|||++.+.. ++.++|||||||++|||++|..||...+..+.+..+... +. ..
T Consensus 172 ~~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~---~~-----------~~ 236 (297)
T cd06659 172 PKRKSLVGTPYWMAPEVISRTP-YGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDS---PP-----------PK 236 (297)
T ss_pred ccccceecCccccCHHHHccCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcc---CC-----------CC
Confidence 223467899999999996554 899999999999999999999999876655544332210 00 00
Q ss_pred CCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCCCCCCCCCCCC
Q 012233 374 FKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNTCLPNGR 437 (468)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~~~~~~~~~~~ 437 (468)
. .....++.++.++|.+||+.+|.+||++.++++||||.+...+.+.++..+
T Consensus 237 ~------------~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~~~~~~~~~~~~~~ 288 (297)
T cd06659 237 L------------KNAHKISPVLRDFLERMLTREPQERATAQELLDHPFLLQTGLPECLVPLIQ 288 (297)
T ss_pred c------------cccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhChhhccCCCcccccchHH
Confidence 0 012346889999999999999999999999999999999887776655544
No 229
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=3.2e-40 Score=314.95 Aligned_cols=253 Identities=27% Similarity=0.398 Sum_probs=202.9
Q ss_pred cceEEeceecccCceEEEEEEEcCCCCEEEEEEeecc----cchHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEE
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD----KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNL 212 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~----~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~l 212 (468)
++|.+.+.||.|+||.||+|.+..+++.+++|++... .....+|+.+++.++||||+++++++ .+...+|+
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~-----~~~~~~~l 77 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSY-----LRRDKLWI 77 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEE-----EeCCEEEE
Confidence 3699999999999999999999889999999988643 23456799999999999999999988 34446899
Q ss_pred EeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCC
Q 012233 213 VLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP 292 (468)
Q Consensus 213 v~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~ 292 (468)
+|||++++.+..... .....+++..++.++.|++.||.|||+ +||+|+||||+||+++.++ .++|+|||++.....
T Consensus 78 ~~e~~~~~~l~~~~~--~~~~~l~~~~~~~~~~ql~~~l~~lh~-~~i~h~dl~p~ni~i~~~~-~~~l~d~g~~~~~~~ 153 (262)
T cd06613 78 VMEYCGGGSLQDIYQ--VTRGPLSELQIAYVCRETLKGLAYLHE-TGKIHRDIKGANILLTEDG-DVKLADFGVSAQLTA 153 (262)
T ss_pred EEeCCCCCcHHHHHH--hhccCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCChhhEEECCCC-CEEECccccchhhhh
Confidence 999999876654322 223568899999999999999999998 8999999999999999887 799999999876543
Q ss_pred CC-CCccccccCCccccccccCC--CCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCC
Q 012233 293 GE-PNISYICSRYYRAPELIFGA--TEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP 369 (468)
Q Consensus 293 ~~-~~~~~~gt~~y~aPE~~~~~--~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 369 (468)
.. ......++..|+|||.+.+. ..++.++|+|||||++|+|++|..||...+.......+......+
T Consensus 154 ~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~---------- 223 (262)
T cd06613 154 TIAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPP---------- 223 (262)
T ss_pred hhhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCC----------
Confidence 22 23345788899999998654 247889999999999999999999998876555544432210000
Q ss_pred CCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCC
Q 012233 370 NYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPF 422 (468)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~ 422 (468)
+. ......++.++.+||.+||..||..|||+.+++.|||
T Consensus 224 -------~~-------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~ 262 (262)
T cd06613 224 -------PK-------LKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQHPF 262 (262)
T ss_pred -------cc-------ccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcCCC
Confidence 00 0012235788999999999999999999999999998
No 230
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=3.1e-40 Score=314.31 Aligned_cols=248 Identities=26% Similarity=0.462 Sum_probs=201.9
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeecc------cchHHHHHHHHHHcCCCCcccccceeeecCCCCceEEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~------~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~ 211 (468)
+|.+.+.||+|+||.||++.+..+|+.||+|.+... .....+|+.+++.++||||+++++++ .+..+.+
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~ 75 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESF-----EENGNLY 75 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeee-----cCCCeEE
Confidence 489999999999999999999999999999988532 12456799999999999999999988 4555789
Q ss_pred EEeecccch-HHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCcccc
Q 012233 212 LVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (468)
Q Consensus 212 lv~e~~~~~-ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~ 290 (468)
+||||+.++ +...+.. .....+++..+..++.|++.||.|||+ +|++|+||+|+|||++.++ .++|+|||++...
T Consensus 76 lv~e~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~l~~~l~~lh~-~~i~h~~l~~~nil~~~~~-~~~l~d~~~~~~~ 151 (256)
T cd08218 76 IVMDYCEGGDLYKKINA--QRGVLFPEDQILDWFVQICLALKHVHD-RKILHRDIKSQNIFLTKDG-TIKLGDFGIARVL 151 (256)
T ss_pred EEEecCCCCcHHHHHHh--ccCCCCCHHHHHHHHHHHHHHHHHHHh-CCEecCCCCHHHEEEcCCC-CEEEeeccceeec
Confidence 999999865 4333321 123457888999999999999999998 8999999999999999887 7999999999765
Q ss_pred CCCCC-CccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCC
Q 012233 291 VPGEP-NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP 369 (468)
Q Consensus 291 ~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 369 (468)
..... .....|++.|+|||++.+.. ++.++|+|||||++|+|++|..||......+.+..+....
T Consensus 152 ~~~~~~~~~~~~~~~~~~pe~~~~~~-~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~------------- 217 (256)
T cd08218 152 NSTVELARTCIGTPYYLSPEICENRP-YNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGS------------- 217 (256)
T ss_pred CcchhhhhhccCCccccCHHHhCCCC-CCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCC-------------
Confidence 43221 22346788999999986654 8899999999999999999999998776666555543310
Q ss_pred CCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCC
Q 012233 370 NYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (468)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f 423 (468)
++ ..+..++.++.++|.+||+.+|.+||++.+++.||||
T Consensus 218 ------~~---------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~~~~ 256 (256)
T cd08218 218 ------YP---------PVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEKNFI 256 (256)
T ss_pred ------CC---------CCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhCcCC
Confidence 00 0224578899999999999999999999999999998
No 231
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=7.3e-40 Score=311.75 Aligned_cols=248 Identities=31% Similarity=0.490 Sum_probs=202.6
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc------chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~ 211 (468)
+|+..+.||.|+||.||.+++..++..+++|.+.... ....+|+.++++++|+||+++++++. +...++
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-----~~~~~~ 75 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFM-----DDNTLL 75 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEe-----cCCeEE
Confidence 4899999999999999999999999999999875321 23457999999999999999999984 445689
Q ss_pred EEeecccch-HHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCcccc
Q 012233 212 LVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (468)
Q Consensus 212 lv~e~~~~~-ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~ 290 (468)
++|||+.++ +.+.+... ....+++..+..++.|++.||.|||+ .|++|+||+|+||+++.++ .+||+|||++...
T Consensus 76 ~~~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~lh~-~~i~h~dl~p~ni~~~~~~-~~kl~d~~~~~~~ 151 (256)
T cd08221 76 IEMEYANGGTLYDKIVRQ--KGQLFEEEMVLWYLFQIVSAVSYIHK-AGILHRDIKTLNIFLTKAG-LIKLGDFGISKIL 151 (256)
T ss_pred EEEEecCCCcHHHHHHhc--cccCCCHHHHHHHHHHHHHHHHHHHh-CCccccCCChHhEEEeCCC-CEEECcCcceEEc
Confidence 999999865 44433321 13568899999999999999999998 8999999999999999888 7999999998765
Q ss_pred CCCC-CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCC
Q 012233 291 VPGE-PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP 369 (468)
Q Consensus 291 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 369 (468)
.... ......+++.|+|||.+.+.. ++.++|+|||||++|+|++|..||......+....+... ..
T Consensus 152 ~~~~~~~~~~~~~~~y~ape~~~~~~-~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~--~~---------- 218 (256)
T cd08221 152 GSEYSMAETVVGTPYYMSPELCQGVK-YNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQG--NY---------- 218 (256)
T ss_pred ccccccccccCCCccccCHhhcCCCC-CCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcC--CC----------
Confidence 4333 233456899999999987654 889999999999999999999999887666655554331 00
Q ss_pred CCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCC
Q 012233 370 NYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (468)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f 423 (468)
.. ....++.++.++|.+||..||.+||++.+++.|||+
T Consensus 219 --~~--------------~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~~l 256 (256)
T cd08221 219 --TP--------------VVSVYSSELISLVHSLLQQDPEKRPTADEVLDQPLL 256 (256)
T ss_pred --CC--------------CccccCHHHHHHHHHHcccCcccCCCHHHHhhCcCC
Confidence 00 113478899999999999999999999999999996
No 232
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=3.1e-40 Score=322.88 Aligned_cols=254 Identities=21% Similarity=0.279 Sum_probs=190.8
Q ss_pred cceEEeceecccCceEEEEEEEcC----------------CCCEEEEEEeeccc-----chHHHHHHHHHHcCCCCcccc
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLE----------------TGDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSL 195 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~----------------~g~~vaiK~~~~~~-----~~~~~E~~il~~l~hpnIv~l 195 (468)
.+|.+.+.||+|+||.||+|.+.. ++..||+|.+.... ..+.+|+.+++.++||||+++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 84 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL 84 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 469999999999999999998632 34479999886432 235579999999999999999
Q ss_pred cceeeecCCCCceEEEEEeecccchHH-HHHhhhh---------------hcCCCCCHHHHHHHHHHHHHHHHHhHhcCC
Q 012233 196 KHCFFSTTEKDELYLNLVLEYISETVY-RVSKHYT---------------RMNQHVPILYVQLYTYQICRALNYLHHVVG 259 (468)
Q Consensus 196 ~~~~~~~~~~~~~~~~lv~e~~~~~ll-~~~~~~~---------------~~~~~~~~~~~~~~~~qi~~aL~yLH~~~g 259 (468)
++++.. ....++||||+.++.+ +.+.... .....+++..+..++.||+.||.|||+ .|
T Consensus 85 ~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~-~~ 158 (304)
T cd05096 85 LGVCVD-----EDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSS-LN 158 (304)
T ss_pred EEEEec-----CCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHH-CC
Confidence 998843 3458899999986544 3332211 111346778889999999999999998 89
Q ss_pred ccccCCCCCCeeecCCCCcEEEeeecCccccCCCCC---CccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-
Q 012233 260 VCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGEP---NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL- 335 (468)
Q Consensus 260 ivHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~- 335 (468)
|+||||||+|||++.++ .+||+|||+++....... .....++..|+|||++.+.. ++.++|||||||++|||++
T Consensus 159 ivH~dlkp~Nill~~~~-~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~~~ 236 (304)
T cd05096 159 FVHRDLATRNCLVGENL-TIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGK-FTTASDVWAFGVTLWEILML 236 (304)
T ss_pred ccccCcchhheEEcCCc-cEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCC-CCchhhhHHHHHHHHHHHHc
Confidence 99999999999999887 799999999976533321 12234578899999986554 8999999999999999986
Q ss_pred -CCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCH
Q 012233 336 -GQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTA 414 (468)
Q Consensus 336 -G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~ 414 (468)
|..||...+..+.+..+......... . .+ ...+..++..+.+||.+||+.||.+|||+
T Consensus 237 ~~~~p~~~~~~~~~~~~~~~~~~~~~~-----------~-~~---------~~~~~~~~~~~~~li~~cl~~~p~~RPs~ 295 (304)
T cd05096 237 CKEQPYGELTDEQVIENAGEFFRDQGR-----------Q-VY---------LFRPPPCPQGLYELMLQCWSRDCRERPSF 295 (304)
T ss_pred cCCCCCCcCCHHHHHHHHHHHhhhccc-----------c-cc---------ccCCCCCCHHHHHHHHHHccCCchhCcCH
Confidence 66788876665555444332111000 0 00 01223578899999999999999999999
Q ss_pred HHHhC
Q 012233 415 LEACA 419 (468)
Q Consensus 415 ~ell~ 419 (468)
.++..
T Consensus 296 ~~i~~ 300 (304)
T cd05096 296 SDIHA 300 (304)
T ss_pred HHHHH
Confidence 99943
No 233
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=5.3e-40 Score=315.65 Aligned_cols=253 Identities=29% Similarity=0.490 Sum_probs=198.8
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc--------------chHHHHHHHHHHcCCCCcccccceeeecC
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK--------------RYKNRELQIMRLLNHPNVVSLKHCFFSTT 203 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~--------------~~~~~E~~il~~l~hpnIv~l~~~~~~~~ 203 (468)
+|.+.+.||.|+||.||+|.+..+|+.||+|.+.... ....+|+.+++.++||||+++++++
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~---- 77 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFE---- 77 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEe----
Confidence 5899999999999999999998899999999874311 1245689999999999999999987
Q ss_pred CCCceEEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEee
Q 012233 204 EKDELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICD 283 (468)
Q Consensus 204 ~~~~~~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~D 283 (468)
......++||||+.++.+.... .....++...+..++.||+.||.|||+ .|++|+||+|+||+++.++ .++|+|
T Consensus 78 -~~~~~~~lv~e~~~~~~L~~~l---~~~~~l~~~~~~~~~~qi~~~l~~lH~-~~i~H~dl~~~nil~~~~~-~~~l~d 151 (272)
T cd06629 78 -TTEEYLSIFLEYVPGGSIGSCL---RTYGRFEEQLVRFFTEQVLEGLAYLHS-KGILHRDLKADNLLVDADG-ICKISD 151 (272)
T ss_pred -ccCCceEEEEecCCCCcHHHHH---hhccCCCHHHHHHHHHHHHHHHHHHhh-CCeeecCCChhhEEEcCCC-eEEEee
Confidence 3444688999999876443222 123568888999999999999999998 8999999999999999887 799999
Q ss_pred ecCccccCCCC---CCccccccCCccccccccCCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCC
Q 012233 284 FGSAKMLVPGE---PNISYICSRYYRAPELIFGAT-EYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTP 359 (468)
Q Consensus 284 FG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~-~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~ 359 (468)
||++....... ......++..|+|||.+.... .++.++|+||||+++|+|++|..||........+.++....
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~--- 228 (272)
T cd06629 152 FGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKR--- 228 (272)
T ss_pred ccccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccc---
Confidence 99987543221 122356788999999986543 47899999999999999999999997655444333322110
Q ss_pred CHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCC
Q 012233 360 TREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (468)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f 423 (468)
....++ ......++.++.+||.+||..||.+||++.+++.||||
T Consensus 229 ------------~~~~~~--------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (272)
T cd06629 229 ------------SAPPIP--------PDVSMNLSPVALDFLNACFTINPDNRPTARELLQHPFI 272 (272)
T ss_pred ------------cCCcCC--------ccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhCCCC
Confidence 000111 11234578999999999999999999999999999997
No 234
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=6.1e-40 Score=312.15 Aligned_cols=250 Identities=26% Similarity=0.411 Sum_probs=200.6
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeecc------cchHHHHHHHHHHcCCCCcccccceeeecCCCCceEEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~------~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~ 211 (468)
+|.+.+.||.|+||.||++.+..+|..||+|.+... .....+|+.+++.++|+||+++++.+ ......+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~-----~~~~~~~ 75 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASF-----QENGRLF 75 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhhee-----ccCCeEE
Confidence 488999999999999999999999999999988532 23455799999999999999999988 4445689
Q ss_pred EEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccC
Q 012233 212 LVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (468)
Q Consensus 212 lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~ 291 (468)
+|+||+.++.+...... .....+++..+..++.|++.||.|||+ .+|+|+||||+||+++.++..+||+|||.+....
T Consensus 76 lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~~~l~~~l~~lh~-~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~ 153 (257)
T cd08225 76 IVMEYCDGGDLMKRINR-QRGVLFSEDQILSWFVQISLGLKHIHD-RKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLN 153 (257)
T ss_pred EEEecCCCCcHHHHHHh-ccCCCCCHHHHHHHHHHHHHHHHHHHH-CCcccccCCHHHEEEcCCCCeEEecccccchhcc
Confidence 99999986544322211 122357889999999999999999998 8999999999999999886567999999987664
Q ss_pred CCCC-CccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCC
Q 012233 292 PGEP-NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPN 370 (468)
Q Consensus 292 ~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 370 (468)
.... .....|++.|+|||++.+.. ++.++|+|||||++|+|++|..||...+..+....+....
T Consensus 154 ~~~~~~~~~~~~~~~~ape~~~~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-------------- 218 (257)
T cd08225 154 DSMELAYTCVGTPYYLSPEICQNRP-YNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGY-------------- 218 (257)
T ss_pred CCcccccccCCCccccCHHHHcCCC-CCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhccc--------------
Confidence 3322 22346788999999986554 8899999999999999999999998766555444332210
Q ss_pred CccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCC
Q 012233 371 YTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (468)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f 423 (468)
++ .....++.++.++|.+||..+|++|||+.+++.||||
T Consensus 219 -----~~---------~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~~~~ 257 (257)
T cd08225 219 -----FA---------PISPNFSRDLRSLISQLFKVSPRDRPSITSILKRPFL 257 (257)
T ss_pred -----CC---------CCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhCCCC
Confidence 00 0223478899999999999999999999999999997
No 235
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=3.1e-40 Score=332.11 Aligned_cols=251 Identities=22% Similarity=0.296 Sum_probs=191.9
Q ss_pred CcccceEEeceecccCceEEEEEEEcCC-----CCEEEEEEeeccc-----chHHHHHHHHHHc-CCCCcccccceeeec
Q 012233 134 KQTISYMAERVVGTGSFGVVFQAKCLET-----GDSVAIKKVLQDK-----RYKNRELQIMRLL-NHPNVVSLKHCFFST 202 (468)
Q Consensus 134 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~-----g~~vaiK~~~~~~-----~~~~~E~~il~~l-~hpnIv~l~~~~~~~ 202 (468)
....+|.+.+.||+|+||.||+|.+... +..||+|.+.... ....+|+.+++.+ +|+||+++++++
T Consensus 35 ~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~--- 111 (374)
T cd05106 35 FPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGAC--- 111 (374)
T ss_pred ccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEe---
Confidence 3345799999999999999999986543 3579999986432 2345799999999 899999999988
Q ss_pred CCCCceEEEEEeecccchHHH-HHhhhh----------------------------------------------------
Q 012233 203 TEKDELYLNLVLEYISETVYR-VSKHYT---------------------------------------------------- 229 (468)
Q Consensus 203 ~~~~~~~~~lv~e~~~~~ll~-~~~~~~---------------------------------------------------- 229 (468)
.....+++|||||.++.+. .+....
T Consensus 112 --~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (374)
T cd05106 112 --THGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSS 189 (374)
T ss_pred --cCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccc
Confidence 4444589999999865443 332110
Q ss_pred --------------hcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCCCCC
Q 012233 230 --------------RMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGEP 295 (468)
Q Consensus 230 --------------~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~~~~ 295 (468)
.....+++..++.++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||+++.......
T Consensus 190 ~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~-~giiHrDLkp~Nil~~~~~-~~kL~DfGla~~~~~~~~ 267 (374)
T cd05106 190 SSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLAS-KNCIHRDVAARNVLLTDGR-VAKICDFGLARDIMNDSN 267 (374)
T ss_pred cccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHH-CCEEeccCchheEEEeCCC-eEEEeeceeeeeccCCcc
Confidence 011347788899999999999999998 8999999999999999877 799999999976543321
Q ss_pred C---ccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCC
Q 012233 296 N---ISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNY 371 (468)
Q Consensus 296 ~---~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 371 (468)
. ....++..|+|||++.+. .++.++|||||||++|+|++ |..||........+..+......+
T Consensus 268 ~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~------------ 334 (374)
T cd05106 268 YVVKGNARLPVKWMAPESIFDC-VYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQM------------ 334 (374)
T ss_pred eeeccCCCCccceeCHHHhcCC-CCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccCc------------
Confidence 1 122345679999998654 48999999999999999997 999998765544444433311000
Q ss_pred ccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 372 TEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
..+..++++++++|.+||+.||.+|||+.++++
T Consensus 335 ---------------~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~ 367 (374)
T cd05106 335 ---------------SRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQ 367 (374)
T ss_pred ---------------cCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 012336889999999999999999999999875
No 236
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=8.8e-40 Score=313.57 Aligned_cols=248 Identities=27% Similarity=0.447 Sum_probs=191.4
Q ss_pred eceecccCceEEEEEEEcCCCCEEEEEEeeccc----chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEEEeecc
Q 012233 142 ERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVLEYI 217 (468)
Q Consensus 142 ~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv~e~~ 217 (468)
...||+|+||.||+|.+..++..||+|.+.... ....+|+.+++.++|+||+++++++ ....+.++|+||+
T Consensus 13 ~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-----~~~~~~~lv~e~~ 87 (268)
T cd06624 13 RVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSD-----SENGFFKIFMEQV 87 (268)
T ss_pred eEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeee-----ccCCEEEEEEecC
Confidence 357999999999999999899999999875432 3456799999999999999999988 4445689999999
Q ss_pred cchHHHHHhhhhhcCCCC--CHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCCCCC
Q 012233 218 SETVYRVSKHYTRMNQHV--PILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGEP 295 (468)
Q Consensus 218 ~~~ll~~~~~~~~~~~~~--~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~~~~ 295 (468)
.++.+....... ...+ +...+..++.||+.||.|||+ .||+||||||+||+++.+...++|+|||.+........
T Consensus 88 ~~~~L~~~l~~~--~~~~~~~~~~~~~~~~qi~~al~~lH~-~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~ 164 (268)
T cd06624 88 PGGSLSALLRSK--WGPLKDNEQTIIFYTKQILEGLKYLHD-NQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINP 164 (268)
T ss_pred CCCCHHHHHHHh--cccCCCcHHHHHHHHHHHHHHHHHHHH-CCEeecCCCHHHEEEcCCCCeEEEecchhheecccCCC
Confidence 876554322211 1234 777888899999999999998 89999999999999987444799999999876533222
Q ss_pred -CccccccCCccccccccCC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCCcc
Q 012233 296 -NISYICSRYYRAPELIFGA-TEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTE 373 (468)
Q Consensus 296 -~~~~~gt~~y~aPE~~~~~-~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 373 (468)
.....+++.|+|||.+.+. ..++.++|+||||+++|+|++|+.||................
T Consensus 165 ~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~----------------- 227 (268)
T cd06624 165 CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMF----------------- 227 (268)
T ss_pred ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhh-----------------
Confidence 2234678999999998543 237889999999999999999999997543221111000000
Q ss_pred CCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCC
Q 012233 374 FKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (468)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f 423 (468)
.....++..+++++++||.+||+.+|.+|||+.+++.||||
T Consensus 228 ---------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 268 (268)
T cd06624 228 ---------KIHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQDPFL 268 (268)
T ss_pred ---------ccCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhCCCC
Confidence 00011344578899999999999999999999999999997
No 237
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=6.3e-40 Score=316.64 Aligned_cols=245 Identities=24% Similarity=0.384 Sum_probs=191.9
Q ss_pred eecccCceEEEEEEEcCCCCEEEEEEeecccc-------hHHHHH---HHHHHcCCCCcccccceeeecCCCCceEEEEE
Q 012233 144 VVGTGSFGVVFQAKCLETGDSVAIKKVLQDKR-------YKNREL---QIMRLLNHPNVVSLKHCFFSTTEKDELYLNLV 213 (468)
Q Consensus 144 ~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~~-------~~~~E~---~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv 213 (468)
+||+|+||.||+|.+..+++.||+|.+.+... ....|. .+++...||||+++++++ .+...+|+|
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~~v 75 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAF-----HTPDKLSFI 75 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeee-----ecCCEEEEE
Confidence 48999999999999999999999998854321 122233 344455799999999888 444568999
Q ss_pred eecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCCC
Q 012233 214 LEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPG 293 (468)
Q Consensus 214 ~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~~ 293 (468)
|||+.++.+.... .....+++..++.++.|++.||.|||+ .+|+||||||+||+++.++ .++|+|||++......
T Consensus 76 ~e~~~g~~L~~~l---~~~~~l~~~~~~~~~~ql~~~l~~lH~-~~i~H~di~p~nili~~~~-~~kl~dfg~~~~~~~~ 150 (278)
T cd05606 76 LDLMNGGDLHYHL---SQHGVFSEAEMRFYAAEIILGLEHMHN-RFVVYRDLKPANILLDEHG-HVRISDLGLACDFSKK 150 (278)
T ss_pred EecCCCCcHHHHH---HhcCCCCHHHHHHHHHHHHHHHHHHHH-CCEEcCCCCHHHEEECCCC-CEEEccCcCccccCcc
Confidence 9999987654322 224568999999999999999999998 8999999999999999887 7999999998755332
Q ss_pred CCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHH--HHHHHHHhCCCCHHHHhhcCCCC
Q 012233 294 EPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQ--LVEIIKILGTPTREEIKCMNPNY 371 (468)
Q Consensus 294 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~ 371 (468)
......|+..|+|||++.+...++.++|+||+||++|+|++|+.||........ .......
T Consensus 151 -~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~---------------- 213 (278)
T cd05606 151 -KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLT---------------- 213 (278)
T ss_pred -CCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhc----------------
Confidence 223457899999999997555589999999999999999999999987532211 1111100
Q ss_pred ccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCC-----CHHHHhCCCCCCCCC
Q 012233 372 TEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRC-----TALEACAHPFFDDLR 427 (468)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~-----s~~ell~hp~f~~~~ 427 (468)
.. ..++..++.++.++|.+||..||.+|+ ++.+++.||||+++.
T Consensus 214 ~~------------~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~~~ 262 (278)
T cd05606 214 MA------------VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRSLD 262 (278)
T ss_pred cC------------CCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccccCCC
Confidence 00 012344789999999999999999999 999999999999865
No 238
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.8e-39 Score=314.86 Aligned_cols=266 Identities=24% Similarity=0.392 Sum_probs=201.4
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc-----chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNL 212 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~l 212 (468)
+|...+.||.|++|.||+|.+..+++.||+|.+.... ....+|+++++.++||||++++++|... ....+|+
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~---~~~~~~l 78 (287)
T cd06621 2 KIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDE---SSSSIGI 78 (287)
T ss_pred ceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEcc---CCCeEEE
Confidence 5899999999999999999999999999999886432 2345799999999999999999988542 2335789
Q ss_pred EeecccchHH-HHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccC
Q 012233 213 VLEYISETVY-RVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (468)
Q Consensus 213 v~e~~~~~ll-~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~ 291 (468)
||||++++.+ +++.........+++..+..++.||+.||.|||+ .|++|+||+|+||+++.++ .++|+|||++....
T Consensus 79 v~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~-~~i~H~dl~~~nil~~~~~-~~~l~dfg~~~~~~ 156 (287)
T cd06621 79 AMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHS-RKIIHRDIKPSNILLTRKG-QVKLCDFGVSGELV 156 (287)
T ss_pred EEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEEecCC-eEEEeecccccccc
Confidence 9999986544 3333333345668889999999999999999998 8999999999999999887 79999999986543
Q ss_pred CCCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcH-HHHHHHHHHhCCCCHHHHhhcCCC
Q 012233 292 PGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGV-DQLVEIIKILGTPTREEIKCMNPN 370 (468)
Q Consensus 292 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~ 370 (468)
... .....++..|+|||.+.+. .++.++|||||||++|+|++|..||...... ....+....+......
T Consensus 157 ~~~-~~~~~~~~~y~~pE~~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-------- 226 (287)
T cd06621 157 NSL-AGTFTGTSFYMAPERIQGK-PYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNP-------- 226 (287)
T ss_pred ccc-cccccCCccccCHHHhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCch--------
Confidence 222 2245678899999998654 4899999999999999999999999865220 0001111111110000
Q ss_pred CccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCCC
Q 012233 371 YTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRD 428 (468)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~~ 428 (468)
.++. .+ ......++.+.+||.+||..||.+|||+.|++.||||+....
T Consensus 227 ----~~~~---~~---~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~~~~~~ 274 (287)
T cd06621 227 ----ELKD---EP---GNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKAQMK 274 (287)
T ss_pred ----hhcc---CC---CCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCcccccccc
Confidence 0000 00 000124678999999999999999999999999999976544
No 239
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=4.5e-40 Score=314.67 Aligned_cols=254 Identities=28% Similarity=0.495 Sum_probs=199.0
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc-----chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNL 212 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~l 212 (468)
+|.+.+.||.|+||.||+|.+..+++.||+|.+.... ....+|+++++.+.||||+++++.+. .....++
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-----~~~~~~l 76 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFY-----NNGDISI 76 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeee-----cCCEEEE
Confidence 4888899999999999999999999999999885542 23457999999999999999999883 3456899
Q ss_pred EeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCC
Q 012233 213 VLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP 292 (468)
Q Consensus 213 v~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~ 292 (468)
|+||++++.+..... .....+++..+..++.|++.||+|||+..|++|+||||+||+++.++ .++|+|||.+.....
T Consensus 77 v~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~-~~~l~d~g~~~~~~~ 153 (265)
T cd06605 77 CMEYMDGGSLDKILK--EVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRG-QIKLCDFGVSGQLVN 153 (265)
T ss_pred EEEecCCCcHHHHHH--HccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCC-CEEEeecccchhhHH
Confidence 999999654433222 11267889999999999999999999637999999999999999887 799999999876533
Q ss_pred CCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCc-HHHHHHHHHH-hCCCCHHHHhhcCCC
Q 012233 293 GEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESG-VDQLVEIIKI-LGTPTREEIKCMNPN 370 (468)
Q Consensus 293 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~-~~~~~~i~~~-~~~~~~~~~~~~~~~ 370 (468)
.... ...++..|+|||.+.+. .++.++|+|||||++|+|++|..||..... .+.....++. ...+
T Consensus 154 ~~~~-~~~~~~~y~~PE~~~~~-~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~----------- 220 (265)
T cd06605 154 SLAK-TFVGTSSYMAPERIQGN-DYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEP----------- 220 (265)
T ss_pred HHhh-cccCChhccCHHHHcCC-CCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCC-----------
Confidence 2222 26788999999998765 589999999999999999999999976421 1111111111 1000
Q ss_pred CccCCCCcccCCCccccccc-CCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCC
Q 012233 371 YTEFKFPQIKAHPWHKIFHK-RMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDL 426 (468)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~-~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~ 426 (468)
.+. ++. .++.++.+||.+||..||.+|||+.+++.||||+..
T Consensus 221 -----~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~~~~ 263 (265)
T cd06605 221 -----PPR---------LPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEHPFIKKY 263 (265)
T ss_pred -----CCC---------CChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhCchhhcc
Confidence 000 111 268899999999999999999999999999999864
No 240
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=1.5e-40 Score=320.56 Aligned_cols=250 Identities=24% Similarity=0.356 Sum_probs=200.6
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc-----chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNL 212 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~l 212 (468)
.|...+.||+|+||.||+|.+..++..||+|.+.... ....+|+.+++.++||||+++++++ .+....|+
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~l 79 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSY-----LKGTKLWI 79 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhccc-----ccCCceEE
Confidence 3778889999999999999998899999999875332 2346799999999999999999988 44456899
Q ss_pred EeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCC
Q 012233 213 VLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP 292 (468)
Q Consensus 213 v~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~ 292 (468)
||||++++.+..... ...+++..++.++.||+.||.|||+ +||+|+||+|+||+++.++ .++|+|||++.....
T Consensus 80 v~e~~~~~~L~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~-~~ivH~dl~p~ni~i~~~~-~~~l~dfg~~~~~~~ 153 (277)
T cd06642 80 IMEYLGGGSALDLLK----PGPLEETYIATILREILKGLDYLHS-ERKIHRDIKAANVLLSEQG-DVKLADFGVAGQLTD 153 (277)
T ss_pred EEEccCCCcHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHhc-CCeeccCCChheEEEeCCC-CEEEccccccccccC
Confidence 999999765543221 3568889999999999999999998 8999999999999999887 799999999876543
Q ss_pred CC-CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCC
Q 012233 293 GE-PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNY 371 (468)
Q Consensus 293 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 371 (468)
.. ......++..|+|||.+.+. .++.++|+|||||++|||++|+.||...........+...
T Consensus 154 ~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~---------------- 216 (277)
T cd06642 154 TQIKRNTFVGTPFWMAPEVIKQS-AYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKN---------------- 216 (277)
T ss_pred cchhhhcccCcccccCHHHhCcC-CCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhhcC----------------
Confidence 32 12234678899999998655 4889999999999999999999999765443322221110
Q ss_pred ccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCC
Q 012233 372 TEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLR 427 (468)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~ 427 (468)
.. ..+...++.++.++|.+||+.+|.+||++.+++.||||..+.
T Consensus 217 ---~~---------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 260 (277)
T cd06642 217 ---SP---------PTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKHKFITRYT 260 (277)
T ss_pred ---CC---------CCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHhHHHHHHh
Confidence 00 012234678899999999999999999999999999997654
No 241
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=5.9e-40 Score=316.50 Aligned_cols=252 Identities=24% Similarity=0.353 Sum_probs=202.6
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc-----chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNL 212 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~l 212 (468)
.|...+.||.|+||.||.|.+..++..||+|.+.... ....+|+.+++.+.||||+++++++ .+..+.|+
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~l 79 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY-----LKGTKLWI 79 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEE-----EECCEEEE
Confidence 3888899999999999999999899999999886432 2345799999999999999999998 34456899
Q ss_pred EeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCC
Q 012233 213 VLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP 292 (468)
Q Consensus 213 v~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~ 292 (468)
||||++++.+..... ...++...+..++.|++.||.|||+ .+++|+||+|+||+++.++ .++|+|||++.....
T Consensus 80 v~e~~~~~~L~~~i~----~~~l~~~~~~~~~~~l~~~l~~lh~-~~ivH~dl~p~Nil~~~~~-~~~l~dfg~~~~~~~ 153 (277)
T cd06640 80 IMEYLGGGSALDLLR----AGPFDEFQIATMLKEILKGLDYLHS-EKKIHRDIKAANVLLSEQG-DVKLADFGVAGQLTD 153 (277)
T ss_pred EEecCCCCcHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHh-CCccCcCCChhhEEEcCCC-CEEEcccccceeccC
Confidence 999998765543221 2458888899999999999999998 8999999999999999887 799999999976543
Q ss_pred CC-CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCC
Q 012233 293 GE-PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNY 371 (468)
Q Consensus 293 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 371 (468)
.. ......++..|+|||.+.+.. ++.++|+|||||++|+|++|..||...........+...
T Consensus 154 ~~~~~~~~~~~~~y~apE~~~~~~-~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~---------------- 216 (277)
T cd06640 154 TQIKRNTFVGTPFWMAPEVIQQSA-YDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKN---------------- 216 (277)
T ss_pred CccccccccCcccccCHhHhccCC-CccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhcC----------------
Confidence 32 222346788999999987554 899999999999999999999999876544333222110
Q ss_pred ccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCCCC
Q 012233 372 TEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDP 429 (468)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~~~ 429 (468)
. ...+...++..+.++|.+||+.+|.+||++.+++.||||......
T Consensus 217 ---~---------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~ 262 (277)
T cd06640 217 ---N---------PPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHKFIVKNAKK 262 (277)
T ss_pred ---C---------CCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhChHhhhcchh
Confidence 0 011233467889999999999999999999999999999875543
No 242
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.8e-42 Score=362.37 Aligned_cols=259 Identities=27% Similarity=0.437 Sum_probs=212.5
Q ss_pred cceEEeceecccCceEEEEEEEcCCCCEEEEEEeec------ccchHHHHHHHHHHcCCCCcccccceeeecCCCCceEE
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQ------DKRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYL 210 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~------~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~ 210 (468)
.+|+-...||.|.||.||-|.+..+|+..|+|-+.- ......+|..++..|.|||+|++|++=.... -+
T Consensus 1235 ~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRe-----kv 1309 (1509)
T KOG4645|consen 1235 FRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHRE-----KV 1309 (1509)
T ss_pred eeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHH-----HH
Confidence 367788899999999999999999999999997632 2234468999999999999999998764332 37
Q ss_pred EEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCcccc
Q 012233 211 NLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (468)
Q Consensus 211 ~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~ 290 (468)
+|.||||.+|.+..+... .+..++...+.|..|++.|++|||+ +|||||||||+||||+.+| .+|++|||.|..+
T Consensus 1310 ~IFMEyC~~GsLa~ll~~---gri~dE~vt~vyt~qll~gla~LH~-~gIVHRDIK~aNI~Ld~~g-~iK~~DFGsa~ki 1384 (1509)
T KOG4645|consen 1310 YIFMEYCEGGSLASLLEH---GRIEDEMVTRVYTKQLLEGLAYLHE-HGIVHRDIKPANILLDFNG-LIKYGDFGSAVKI 1384 (1509)
T ss_pred HHHHHHhccCcHHHHHHh---cchhhhhHHHHHHHHHHHHHHHHHh-cCceecCCCccceeeecCC-cEEeecccceeEe
Confidence 899999998777644332 4556777888999999999999998 8999999999999999888 8999999999887
Q ss_pred CCCC-----CCccccccCCccccccccCCC--CCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHH
Q 012233 291 VPGE-----PNISYICSRYYRAPELIFGAT--EYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREE 363 (468)
Q Consensus 291 ~~~~-----~~~~~~gt~~y~aPE~~~~~~--~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~ 363 (468)
.+.. ......||+.|||||++.+.. +...+.|||||||++.||+||+.||...++.-++.-.+.....|.
T Consensus 1385 ~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh~Pq--- 1461 (1509)
T KOG4645|consen 1385 KNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGHKPQ--- 1461 (1509)
T ss_pred cCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhccCCCC---
Confidence 5543 123578999999999997654 356799999999999999999999987665544433333333332
Q ss_pred HhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCCCCCCC
Q 012233 364 IKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNTC 432 (468)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~~~~~~ 432 (468)
++..++.+.+|||.+||+.||.+|.++.|+|.|-|=+..+++.+.
T Consensus 1462 ------------------------~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~~~~~d~~s~ 1506 (1509)
T KOG4645|consen 1462 ------------------------IPERLSSEGRDFLEHCLEQDPKMRWTASQLLEHAFGKSCTDEDSS 1506 (1509)
T ss_pred ------------------------CchhhhHhHHHHHHHHHhcCchhhhHHHHHHHhhccccccccchh
Confidence 556799999999999999999999999999999998887765543
No 243
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=1e-39 Score=319.71 Aligned_cols=249 Identities=28% Similarity=0.434 Sum_probs=201.6
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc-------chHHHHHHHHHHcCCCCcccccceeeecCCCCceEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYL 210 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~ 210 (468)
.|.+.+.||+|+||.||+|.+..+|+.||+|++.... ....+|+.+++.++||||+++++++. +....
T Consensus 16 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~-----~~~~~ 90 (307)
T cd06607 16 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYL-----REHTA 90 (307)
T ss_pred hhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEE-----eCCeE
Confidence 4999999999999999999999899999999885321 23457999999999999999999984 33458
Q ss_pred EEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCcccc
Q 012233 211 NLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (468)
Q Consensus 211 ~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~ 290 (468)
|+||||+.+++...+.. ....+++..+..++.||+.||.|||+ .||+|+||+|+||+++.++ .++|+|||++...
T Consensus 91 ~lv~e~~~g~l~~~~~~---~~~~l~~~~~~~~~~ql~~~L~~LH~-~~i~H~dl~p~nIl~~~~~-~~kL~dfg~~~~~ 165 (307)
T cd06607 91 WLVMEYCLGSASDILEV---HKKPLQEVEIAAICHGALQGLAYLHS-HERIHRDIKAGNILLTEPG-TVKLADFGSASLV 165 (307)
T ss_pred EEEHHhhCCCHHHHHHH---cccCCCHHHHHHHHHHHHHHHHHHHH-CCceecCCCcccEEECCCC-CEEEeecCcceec
Confidence 89999999887765432 23468899999999999999999998 8999999999999999888 7999999998754
Q ss_pred CCCCCCccccccCCccccccccC--CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcC
Q 012233 291 VPGEPNISYICSRYYRAPELIFG--ATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMN 368 (468)
Q Consensus 291 ~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 368 (468)
... ....+++.|+|||++.+ ...++.++||||||+++|+|++|..||.+.+.......+... .+
T Consensus 166 ~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~--~~--------- 231 (307)
T cd06607 166 SPA---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN--DS--------- 231 (307)
T ss_pred CCC---CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcC--CC---------
Confidence 322 34577889999998842 344788999999999999999999999876655443333210 00
Q ss_pred CCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCC
Q 012233 369 PNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDL 426 (468)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~ 426 (468)
+.+ .....+..+.++|.+||+.||.+||++.+++.||||..-
T Consensus 232 --------~~~--------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 273 (307)
T cd06607 232 --------PTL--------SSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLRE 273 (307)
T ss_pred --------CCC--------CchhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccc
Confidence 000 012357789999999999999999999999999999863
No 244
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=9.5e-40 Score=316.24 Aligned_cols=257 Identities=28% Similarity=0.415 Sum_probs=200.7
Q ss_pred cceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc-----chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEE
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~ 211 (468)
.+|++.+.||+|+||+||++.+..+|..||+|++.... ..+.+|+++++.++||||+++++++ .+...++
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~~~~ 79 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAF-----LNENNIC 79 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeE-----ecCCEEE
Confidence 46999999999999999999999999999999875432 2345799999999999999999998 3445689
Q ss_pred EEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccC
Q 012233 212 LVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (468)
Q Consensus 212 lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~ 291 (468)
+||||++++.+.... .....+++..++.++.|++.||.|||+..||+|+||||+||+++.++ .++|+|||++....
T Consensus 80 lv~e~~~~~~L~~~~---~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~-~~~l~d~gl~~~~~ 155 (284)
T cd06620 80 MCMEFMDCGSLDRIY---KKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRG-QIKLCDFGVSGELI 155 (284)
T ss_pred EEEecCCCCCHHHHH---HhccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCC-cEEEccCCcccchh
Confidence 999999987654332 22356889999999999999999999646999999999999999887 79999999986543
Q ss_pred CCCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHH----H---HHHHHHHhCCCCHHHH
Q 012233 292 PGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVD----Q---LVEIIKILGTPTREEI 364 (468)
Q Consensus 292 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~----~---~~~i~~~~~~~~~~~~ 364 (468)
.. ......|+..|+|||++.+. .++.++|+|||||++|+|++|..||......+ . +.........
T Consensus 156 ~~-~~~~~~~~~~~~aPE~~~~~-~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~------ 227 (284)
T cd06620 156 NS-IADTFVGTSTYMSPERIQGG-KYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQ------ 227 (284)
T ss_pred hh-ccCccccCcccCCHHHHccC-CCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhh------
Confidence 22 22345789999999998654 58999999999999999999999998654321 1 1111111000
Q ss_pred hhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCC
Q 012233 365 KCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLR 427 (468)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~ 427 (468)
. ....+ ....++.++.+||.+||+.||.+|||+.|+++||||..-.
T Consensus 228 -~-----~~~~~-----------~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~~~ 273 (284)
T cd06620 228 -E-----PPPRL-----------PSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQAL 273 (284)
T ss_pred -c-----cCCCC-----------CchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCccccccc
Confidence 0 00000 0112678899999999999999999999999999997643
No 245
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=7.4e-40 Score=314.02 Aligned_cols=245 Identities=21% Similarity=0.248 Sum_probs=192.6
Q ss_pred cceEEeceecccCceEEEEEEEc---CCCCEEEEEEeeccc-----chHHHHHHHHHHcCCCCcccccceeeecCCCCce
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCL---ETGDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDEL 208 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~---~~g~~vaiK~~~~~~-----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 208 (468)
.+|.+.+.||+|+||.||+|.+. ..+..||+|.+.... ..+.+|+.+++.++||||+++++++. ...
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~~~ 79 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVIT-----RGN 79 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEe-----cCC
Confidence 35999999999999999999875 346789999886542 23457999999999999999999884 334
Q ss_pred EEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCcc
Q 012233 209 YLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAK 288 (468)
Q Consensus 209 ~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~ 288 (468)
..++||||++++.+..... .....+++..++.++.||+.||+|||+ +|++||||||+|||++.++ .++|+|||.+.
T Consensus 80 ~~~lv~e~~~~~~L~~~l~--~~~~~l~~~~~~~~~~~i~~al~~lH~-~~iiH~dikp~nili~~~~-~~~l~dfg~~~ 155 (266)
T cd05064 80 TMMIVTEYMSNGALDSFLR--KHEGQLVAGQLMGMLPGLASGMKYLSE-MGYVHKGLAAHKVLVNSDL-VCKISGFRRLQ 155 (266)
T ss_pred CcEEEEEeCCCCcHHHHHH--hCCCCCCHHHHHHHHHHHHHHHHHHHH-CCEeeccccHhhEEEcCCC-cEEECCCcccc
Confidence 5889999999876654332 223468899999999999999999998 8999999999999999887 79999999876
Q ss_pred ccCCCCCC--ccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHh
Q 012233 289 MLVPGEPN--ISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEIK 365 (468)
Q Consensus 289 ~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 365 (468)
........ ....++..|+|||++.+. .++.++|||||||++||+++ |..||.+.+..+.+..+....
T Consensus 156 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~--------- 225 (266)
T cd05064 156 EDKSEAIYTTMSGKSPVLWAAPEAIQYH-HFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGF--------- 225 (266)
T ss_pred cccccchhcccCCCCceeecCHHHHhhC-CccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCC---------
Confidence 54222111 123346789999998654 48999999999999999775 999998877665444432210
Q ss_pred hcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 366 CMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
..+ .+..++..+.+++.+||+.+|.+||++.+++.
T Consensus 226 ---------~~~----------~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~ 260 (266)
T cd05064 226 ---------RLP----------APRNCPNLLHQLMLDCWQKERGERPRFSQIHS 260 (266)
T ss_pred ---------CCC----------CCCCCCHHHHHHHHHHcCCCchhCCCHHHHHH
Confidence 001 22457889999999999999999999999864
No 246
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=100.00 E-value=7.4e-41 Score=324.41 Aligned_cols=279 Identities=34% Similarity=0.571 Sum_probs=226.9
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeecccchH---HHHHHHHHHcC------CCCcccccceeeecCCCCce
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRYK---NRELQIMRLLN------HPNVVSLKHCFFSTTEKDEL 208 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~~~~---~~E~~il~~l~------hpnIv~l~~~~~~~~~~~~~ 208 (468)
.|.+.-..|+|-|++|..|.+..-|..||||+|...+.+. .+|++||++|+ .-|+++|+..| ....
T Consensus 433 RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F-----~hkn 507 (752)
T KOG0670|consen 433 RYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHF-----KHKN 507 (752)
T ss_pred eeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHh-----hhcc
Confidence 6888888999999999999999999999999998766543 47999999996 34899999999 6666
Q ss_pred EEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCcc
Q 012233 209 YLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAK 288 (468)
Q Consensus 209 ~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~ 288 (468)
++|||+|-+.-.|.++++.+.+ +-.+.+..++.|+.|+..||..|.. +||+|.||||+||||+.....+||||||.|.
T Consensus 508 HLClVFE~LslNLRevLKKyG~-nvGL~ikaVRsYaqQLflALklLK~-c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~ 585 (752)
T KOG0670|consen 508 HLCLVFEPLSLNLREVLKKYGR-NVGLHIKAVRSYAQQLFLALKLLKK-CGVLHADIKPDNILVNESKNILKLCDFGSAS 585 (752)
T ss_pred eeEEEehhhhchHHHHHHHhCc-ccceeehHHHHHHHHHHHHHHHHHh-cCeeecccCccceEeccCcceeeeccCcccc
Confidence 7999999999999999888776 4568889999999999999999998 8999999999999999888789999999998
Q ss_pred ccCCCCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhh--
Q 012233 289 MLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKC-- 366 (468)
Q Consensus 289 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~-- 366 (468)
..... ....+..+..|.|||++.|.+ |+...|+||+||+||||.||+..|++.++.+.+...+.+.|..+...++.
T Consensus 586 ~~~en-eitPYLVSRFYRaPEIiLG~~-yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgq 663 (752)
T KOG0670|consen 586 FASEN-EITPYLVSRFYRAPEIILGLP-YDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQ 663 (752)
T ss_pred ccccc-cccHHHHHHhccCcceeecCc-ccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcc
Confidence 76443 334566788999999999876 99999999999999999999999999999999888888888877766653
Q ss_pred -cCCCCc-cCCCCcccCCCc---------cc---------cc--ccCCC-------HHHHHHHHHhcccCCCCCCCHHHH
Q 012233 367 -MNPNYT-EFKFPQIKAHPW---------HK---------IF--HKRMP-------PEALDLVSRLLQYSPSLRCTALEA 417 (468)
Q Consensus 367 -~~~~~~-~~~~~~~~~~~~---------~~---------~~--~~~~~-------~~l~~li~~~L~~dP~~R~s~~el 417 (468)
.++.|. .+.|-.+..... .. .+ -..++ ..+++|+.+||.+||++|+|..|+
T Consensus 664 F~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqA 743 (752)
T KOG0670|consen 664 FKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQA 743 (752)
T ss_pred hhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHH
Confidence 112221 111111111110 00 00 01122 258899999999999999999999
Q ss_pred hCCCCCCC
Q 012233 418 CAHPFFDD 425 (468)
Q Consensus 418 l~hp~f~~ 425 (468)
|.||||+.
T Consensus 744 L~HpFi~~ 751 (752)
T KOG0670|consen 744 LKHPFITE 751 (752)
T ss_pred hcCCcccC
Confidence 99999974
No 247
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=3.4e-39 Score=308.22 Aligned_cols=251 Identities=29% Similarity=0.486 Sum_probs=198.3
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeecccc------hHHHHHHHHHHcCCCCcccccceeeecCCCCceEEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKR------YKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~~------~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~ 211 (468)
+|.+.+.||+|+||.||+|.+..++..||+|.+..... ...+|+.+++.++|+||+++++.+ .+...++
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~-----~~~~~~~ 75 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVE-----VHREKVY 75 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeE-----ecCCEEE
Confidence 48899999999999999999988999999999864432 345799999999999999999987 3445688
Q ss_pred EEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccC
Q 012233 212 LVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (468)
Q Consensus 212 lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~ 291 (468)
+|+||+.++.+..... ....+++..++.++.|++.||.|||+ .||+|+||+|+||+++.++ .+||+|||++....
T Consensus 76 lv~e~~~~~~L~~~~~---~~~~~~~~~~~~i~~~i~~~l~~lh~-~~i~H~dl~~~nil~~~~~-~~kl~d~g~~~~~~ 150 (264)
T cd06626 76 IFMEYCSGGTLEELLE---HGRILDEHVIRVYTLQLLEGLAYLHS-HGIVHRDIKPANIFLDHNG-VIKLGDFGCAVKLK 150 (264)
T ss_pred EEEecCCCCcHHHHHh---hcCCCChHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEECCCC-CEEEcccccccccC
Confidence 9999998765543322 23457888899999999999999998 8999999999999999877 79999999987764
Q ss_pred CCCCC-----ccccccCCccccccccCCC--CCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHH
Q 012233 292 PGEPN-----ISYICSRYYRAPELIFGAT--EYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEI 364 (468)
Q Consensus 292 ~~~~~-----~~~~gt~~y~aPE~~~~~~--~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 364 (468)
..... ....+++.|+|||++.+.. .++.++|||||||++|+|++|+.||............+.. +.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~-~~------ 223 (264)
T cd06626 151 NNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGA-GH------ 223 (264)
T ss_pred CCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhc-CC------
Confidence 33221 1346788999999986543 3788999999999999999999999765433322222111 00
Q ss_pred hhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCC
Q 012233 365 KCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (468)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f 423 (468)
...+|. ...+++.+.+||.+||+.||.+||++.+++.|||+
T Consensus 224 --------~~~~~~----------~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~ 264 (264)
T cd06626 224 --------KPPIPD----------SLQLSPEGKDFLDRCLESDPKKRPTASELLQHPFV 264 (264)
T ss_pred --------CCCCCc----------ccccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 001111 12358899999999999999999999999999997
No 248
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=1.2e-39 Score=311.11 Aligned_cols=246 Identities=33% Similarity=0.523 Sum_probs=192.3
Q ss_pred ceecccCceEEEEEEEcCCCCEEEEEEeecccc-------hHHHHHHH-HHHcCCCCcccccceeeecCCCCceEEEEEe
Q 012233 143 RVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKR-------YKNRELQI-MRLLNHPNVVSLKHCFFSTTEKDELYLNLVL 214 (468)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~~-------~~~~E~~i-l~~l~hpnIv~l~~~~~~~~~~~~~~~~lv~ 214 (468)
+.||.|+||.||+|.+..+|+.||+|.+.+... ....|..+ ...+.|+||+++++++ .....+|+||
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~-----~~~~~~~lv~ 76 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSF-----QSKDYLYLVM 76 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeE-----EcCCeEEEEE
Confidence 468999999999999999999999998854321 11234333 3455899999999988 3444689999
Q ss_pred ecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCCCC
Q 012233 215 EYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGE 294 (468)
Q Consensus 215 e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~~~ 294 (468)
||++++.+..+.. ....+++..+..++.||+.||.|||+ .||+|+||+|+|||++.++ .++|+|||++.....
T Consensus 77 e~~~~~~L~~~l~---~~~~~~~~~~~~i~~qi~~aL~~lH~-~~i~H~dl~p~nil~~~~~-~~~l~dfg~~~~~~~-- 149 (260)
T cd05611 77 EYLNGGDCASLIK---TLGGLPEDWAKQYIAEVVLGVEDLHQ-RGIIHRDIKPENLLIDQTG-HLKLTDFGLSRNGLE-- 149 (260)
T ss_pred eccCCCCHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHeEECCCC-cEEEeecccceeccc--
Confidence 9998765543322 23568899999999999999999998 8999999999999999887 799999999875432
Q ss_pred CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCCccC
Q 012233 295 PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEF 374 (468)
Q Consensus 295 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 374 (468)
.....++..|+|||.+.+.. ++.++||||||+++|+|++|..||...+.......+... ..
T Consensus 150 -~~~~~~~~~y~~pe~~~~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-----------------~~ 210 (260)
T cd05611 150 -NKKFVGTPDYLAPETILGVG-DDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSR-----------------RI 210 (260)
T ss_pred -cccCCCCcCccChhhhcCCC-CcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhc-----------------cc
Confidence 23456888999999987655 899999999999999999999999877665544433221 00
Q ss_pred CCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCC---HHHHhCCCCCCCCC
Q 012233 375 KFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCT---ALEACAHPFFDDLR 427 (468)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s---~~ell~hp~f~~~~ 427 (468)
.++ ......+++++.++|.+||+.||++||+ ++|++.||||+++.
T Consensus 211 ~~~--------~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~~~~~ 258 (260)
T cd05611 211 NWP--------EEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHPFFKSIN 258 (260)
T ss_pred CCC--------CcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcChHhhcCC
Confidence 000 1122347899999999999999999995 57999999998753
No 249
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=1.5e-39 Score=316.81 Aligned_cols=260 Identities=25% Similarity=0.372 Sum_probs=200.6
Q ss_pred CcccceEEeceecccCceEEEEEEEcCCCCEEEEEEeecccc-----hHHHHHHHHHHc-CCCCcccccceeeecCCCCc
Q 012233 134 KQTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKR-----YKNRELQIMRLL-NHPNVVSLKHCFFSTTEKDE 207 (468)
Q Consensus 134 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~~-----~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~~ 207 (468)
...++|.+.+.||+|+||.||+|.+..+++.||||.+..... ...+|+.++..+ .||||+++++++ .+.
T Consensus 12 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~-----~~~ 86 (296)
T cd06618 12 ADLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYF-----ITD 86 (296)
T ss_pred CCcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheee-----ecC
Confidence 344579999999999999999999988899999999864321 223466555555 499999999998 444
Q ss_pred eEEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCc
Q 012233 208 LYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSA 287 (468)
Q Consensus 208 ~~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a 287 (468)
..+|+||||+++.+..+.... ...+++..+..++.||+.||.|||+..||+||||+|+||+++.++ .+||+|||++
T Consensus 87 ~~~~~v~e~~~~~l~~l~~~~---~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~-~~kL~dfg~~ 162 (296)
T cd06618 87 SDVFICMELMSTCLDKLLKRI---QGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASG-NVKLCDFGIS 162 (296)
T ss_pred CeEEEEeeccCcCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCC-CEEECccccc
Confidence 568999999987666554332 346888999999999999999999635999999999999999887 7999999998
Q ss_pred cccCCCCCCccccccCCccccccccCC---CCCCcchhHHHHHHHHHHHHhCCCCCCCCCcH-HHHHHHHHHhCCCCHHH
Q 012233 288 KMLVPGEPNISYICSRYYRAPELIFGA---TEYTTAIDMWSIGCVLAELLLGQPLFPGESGV-DQLVEIIKILGTPTREE 363 (468)
Q Consensus 288 ~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~-~~~~~i~~~~~~~~~~~ 363 (468)
..+..........++..|+|||.+.+. ..++.++|+|||||++|+|++|+.||...... +.+..+... .
T Consensus 163 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~---~---- 235 (296)
T cd06618 163 GRLVDSKAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQE---E---- 235 (296)
T ss_pred hhccCCCcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcC---C----
Confidence 766444433445678899999998644 23788999999999999999999999764322 222222210 0
Q ss_pred HhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCCC
Q 012233 364 IKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRD 428 (468)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~~ 428 (468)
...++ ....++.++.+||.+||..||.+||++.+++.||||+..+.
T Consensus 236 ---------~~~~~----------~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~ 281 (296)
T cd06618 236 ---------PPSLP----------PNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIRRYET 281 (296)
T ss_pred ---------CCCCC----------CCCCCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhccch
Confidence 00000 01136789999999999999999999999999999986543
No 250
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=1.6e-39 Score=311.94 Aligned_cols=247 Identities=26% Similarity=0.368 Sum_probs=190.2
Q ss_pred ceEEecee--cccCceEEEEEEEcCCCCEEEEEEeecccchHHHHHHHHHHc-CCCCcccccceeeecCCCCceEEEEEe
Q 012233 138 SYMAERVV--GTGSFGVVFQAKCLETGDSVAIKKVLQDKRYKNRELQIMRLL-NHPNVVSLKHCFFSTTEKDELYLNLVL 214 (468)
Q Consensus 138 ~y~~~~~l--G~G~fg~Vy~~~~~~~g~~vaiK~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~~~~~~lv~ 214 (468)
.|.+.+.+ |+|+||.||++..+.++..+|+|.+...... ..|+.+...+ +||||++++++|. .....|+||
T Consensus 15 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~-~~e~~~~~~~~~h~~iv~~~~~~~-----~~~~~~iv~ 88 (267)
T PHA03390 15 NCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFN-AIEPMVHQLMKDNPNFIKLYYSVT-----TLKGHVLIM 88 (267)
T ss_pred hhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcc-hhhHHHHHHhhcCCCEEEEEEEEe-----cCCeeEEEE
Confidence 35565555 9999999999999999999999988653221 1234343333 6999999999884 344689999
Q ss_pred ecccch-HHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCCC
Q 012233 215 EYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPG 293 (468)
Q Consensus 215 e~~~~~-ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~~ 293 (468)
||++++ +...+. ....+++..++.++.||+.||.|||+ .||+||||||+||+++.++..++|+|||++.....
T Consensus 89 e~~~~~~L~~~l~----~~~~l~~~~~~~~~~qi~~~l~~lH~-~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~- 162 (267)
T PHA03390 89 DYIKDGDLFDLLK----KEGKLSEAEVKKIIRQLVEALNDLHK-HNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGT- 162 (267)
T ss_pred EcCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHh-CCeeeCCCCHHHEEEeCCCCeEEEecCccceecCC-
Confidence 999865 444332 23478999999999999999999998 89999999999999998875799999999876532
Q ss_pred CCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHH-HHHHHHHhCCCCHHHHhhcCCCCc
Q 012233 294 EPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQ-LVEIIKILGTPTREEIKCMNPNYT 372 (468)
Q Consensus 294 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~ 372 (468)
.....++..|+|||++.+.. ++.++|||||||++|+|++|..||........ ...+......
T Consensus 163 --~~~~~~~~~y~aPE~~~~~~-~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-------------- 225 (267)
T PHA03390 163 --PSCYDGTLDYFSPEKIKGHN-YDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQK-------------- 225 (267)
T ss_pred --CccCCCCCcccChhhhcCCC-CCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhcc--------------
Confidence 22456889999999996554 89999999999999999999999986543321 1111111000
Q ss_pred cCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCC-HHHHhCCCCCCC
Q 012233 373 EFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCT-ALEACAHPFFDD 425 (468)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s-~~ell~hp~f~~ 425 (468)
. ....+.+++.+.+||.+||+.||.+|++ ++++|+||||+.
T Consensus 226 ~------------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h~~~~~ 267 (267)
T PHA03390 226 K------------LPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKHPFLKI 267 (267)
T ss_pred c------------CCcccccCHHHHHHHHHHhccChhhCCchHHHHhcCCcccC
Confidence 0 0122358899999999999999999996 599999999974
No 251
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9.7e-41 Score=329.82 Aligned_cols=271 Identities=28% Similarity=0.457 Sum_probs=211.8
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc-------chHHHHHHHHHHcCCCCcccccceeeecCCCCceEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYL 210 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~ 210 (468)
-|..++.||-|+||+|.++....+...||+|.+.+.. ...+.|..||...+.+-||+||-.| .|...+
T Consensus 630 mFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySF-----QDkdnL 704 (1034)
T KOG0608|consen 630 MFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSF-----QDKDNL 704 (1034)
T ss_pred ceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEe-----ccCCce
Confidence 3888899999999999999988899999999885543 2334689999999999999998888 677779
Q ss_pred EEEeecccchHH-HHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccc
Q 012233 211 NLVLEYISETVY-RVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (468)
Q Consensus 211 ~lv~e~~~~~ll-~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~ 289 (468)
|+||||++||-. .++.. .+-|++..+++|+..+..|+++.|+ .|+|||||||+|||||.+|| |||+|||+++-
T Consensus 705 YFVMdYIPGGDmMSLLIr----mgIFeE~LARFYIAEltcAiesVHk-mGFIHRDiKPDNILIDrdGH-IKLTDFGLCTG 778 (1034)
T KOG0608|consen 705 YFVMDYIPGGDMMSLLIR----MGIFEEDLARFYIAELTCAIESVHK-MGFIHRDIKPDNILIDRDGH-IKLTDFGLCTG 778 (1034)
T ss_pred EEEEeccCCccHHHHHHH----hccCHHHHHHHHHHHHHHHHHHHHh-ccceecccCccceEEccCCc-eeeeecccccc
Confidence 999999997633 33222 4668999999999999999999998 89999999999999999995 99999999853
Q ss_pred cCC---------CCCC----------------------------------ccccccCCccccccccCCCCCCcchhHHHH
Q 012233 290 LVP---------GEPN----------------------------------ISYICSRYYRAPELIFGATEYTTAIDMWSI 326 (468)
Q Consensus 290 ~~~---------~~~~----------------------------------~~~~gt~~y~aPE~~~~~~~~~~~~DvwSl 326 (468)
+.. +... -..+||+.|+|||++... .|+..+|+||.
T Consensus 779 fRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~-g~~q~cdwws~ 857 (1034)
T KOG0608|consen 779 FRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLART-GYTQLCDWWSV 857 (1034)
T ss_pred ceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhccc-CccccchhhHh
Confidence 311 0000 146799999999999754 59999999999
Q ss_pred HHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhccc
Q 012233 327 GCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQY 406 (468)
Q Consensus 327 G~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~ 406 (468)
|||||||+.|++||...+..+...+++... ++ +.|+ +-..+++++.+||.+++.
T Consensus 858 gvil~em~~g~~pf~~~tp~~tq~kv~nw~-------------~~--l~~~----------~~~~ls~e~~~li~kLc~- 911 (1034)
T KOG0608|consen 858 GVILYEMLVGQPPFLADTPGETQYKVINWR-------------NF--LHIP----------YQGNLSKEALDLIQKLCC- 911 (1034)
T ss_pred hHHHHHHhhCCCCccCCCCCcceeeeeehh-------------hc--cccc----------cccccCHHHHHHHHHHhc-
Confidence 999999999999999887766655544310 01 1111 224689999999987653
Q ss_pred CCCCCC---CHHHHhCCCCCCCCCCCCCCCCCCCCCCcc------cccC
Q 012233 407 SPSLRC---TALEACAHPFFDDLRDPNTCLPNGRPLPTL------FNFT 446 (468)
Q Consensus 407 dP~~R~---s~~ell~hp~f~~~~~~~~~~~~~~~~~~~------~~~~ 446 (468)
+++.|+ .++|+..||||+.|...+...-..+=+|.+ .||+
T Consensus 912 sad~RLGkng~d~vKaHpfFkgIDfsslRkq~ApYIP~ItHptDTSNFd 960 (1034)
T KOG0608|consen 912 SADSRLGKNGADQVKAHPFFKGIDFSSLRKQRAPYIPRITHPTDTSNFD 960 (1034)
T ss_pred ChhhhhcccchhhhhcCccccccchHhhhhccCCcCccccCCCccccCC
Confidence 467776 578899999999988776553333335554 5666
No 252
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=3.7e-40 Score=325.93 Aligned_cols=278 Identities=20% Similarity=0.304 Sum_probs=196.9
Q ss_pred ceeccc--CceEEEEEEEcCCCCEEEEEEeeccc------chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEEEe
Q 012233 143 RVVGTG--SFGVVFQAKCLETGDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVL 214 (468)
Q Consensus 143 ~~lG~G--~fg~Vy~~~~~~~g~~vaiK~~~~~~------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv~ 214 (468)
..||.| +||+||+|.+..+|+.||+|++.... ..+.+|+.+++.++||||++++++| ....++++||
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~-----~~~~~~~~v~ 78 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVF-----TTGSWLWVIS 78 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeE-----ecCCceEEEE
Confidence 456776 99999999999999999999885432 2345788999999999999999998 3444689999
Q ss_pred ecccchHH-HHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCCC
Q 012233 215 EYISETVY-RVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPG 293 (468)
Q Consensus 215 e~~~~~ll-~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~~ 293 (468)
||+.++.+ .++... ....+++..+..++.||+.||+|||+ .||+||||||+|||++.++ .++++||+.+......
T Consensus 79 e~~~~~~l~~~l~~~--~~~~~~~~~~~~~~~qi~~aL~~lH~-~~ivHrDlkp~Nill~~~~-~~~~~~~~~~~~~~~~ 154 (328)
T cd08226 79 PFMAYGSANSLLKTY--FPEGMSEALIGNILFGALRGLNYLHQ-NGYIHRNIKASHILISGDG-LVSLSGLSHLYSLVRN 154 (328)
T ss_pred ecccCCCHHHHHHhh--cccCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEEeCCC-cEEEechHHHhhhhcc
Confidence 99986544 333322 13458899999999999999999998 8999999999999999887 7999999865332211
Q ss_pred CCC--------ccccccCCccccccccCC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHH--
Q 012233 294 EPN--------ISYICSRYYRAPELIFGA-TEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTRE-- 362 (468)
Q Consensus 294 ~~~--------~~~~gt~~y~aPE~~~~~-~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~-- 362 (468)
... ....++..|+|||++.+. ..++.++|||||||++|+|++|..||........+..+.......+..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (328)
T cd08226 155 GQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDIT 234 (328)
T ss_pred CccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCcccc
Confidence 110 112345679999998654 347899999999999999999999998876555444433211100000
Q ss_pred -------HHhhcCCCCc----cCCCC-----cccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCC
Q 012233 363 -------EIKCMNPNYT----EFKFP-----QIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDL 426 (468)
Q Consensus 363 -------~~~~~~~~~~----~~~~~-----~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~ 426 (468)
........+. +.... ......+.......+++.+.+||.+||+.||.+|||+.++|+||||+.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~ 314 (328)
T cd08226 235 TFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQV 314 (328)
T ss_pred ccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHH
Confidence 0000000000 00000 0000111111233467889999999999999999999999999999987
Q ss_pred CCC
Q 012233 427 RDP 429 (468)
Q Consensus 427 ~~~ 429 (468)
.+.
T Consensus 315 ~~~ 317 (328)
T cd08226 315 KEQ 317 (328)
T ss_pred HHh
Confidence 764
No 253
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=1.6e-39 Score=309.43 Aligned_cols=245 Identities=26% Similarity=0.460 Sum_probs=197.6
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc-----chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNL 212 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~l 212 (468)
+|.+.+.||.|+||.||++.+..++..||+|.+.... ....+|+.+++.++|+||+++++.+ .+..++|+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~l 75 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESF-----EADGHLYI 75 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEE-----EECCEEEE
Confidence 4889999999999999999999999999999875322 2345689999999999999999988 44456899
Q ss_pred Eeecccch-HHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccC
Q 012233 213 VLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (468)
Q Consensus 213 v~e~~~~~-ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~ 291 (468)
||||++++ +...+.. .....+++..+..++.||+.||.|||+ +||+|+||||+|||++.++ .++|+|||.+....
T Consensus 76 v~e~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~i~~al~~lH~-~~i~H~dl~p~nili~~~~-~~~l~dfg~~~~~~ 151 (255)
T cd08219 76 VMEYCDGGDLMQKIKL--QRGKLFPEDTILQWFVQMCLGVQHIHE-KRVLHRDIKSKNIFLTQNG-KVKLGDFGSARLLT 151 (255)
T ss_pred EEeeCCCCcHHHHHHh--ccCCCCCHHHHHHHHHHHHHHHHHHhh-CCcccCCCCcceEEECCCC-cEEEcccCcceeec
Confidence 99999865 4443322 123457889999999999999999998 8999999999999999887 79999999987654
Q ss_pred CCC-CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCC
Q 012233 292 PGE-PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPN 370 (468)
Q Consensus 292 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 370 (468)
... ......+++.|+|||++.+.. ++.++|+||||+++|+|++|..||...+.......+....
T Consensus 152 ~~~~~~~~~~~~~~~~aPE~~~~~~-~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~-------------- 216 (255)
T cd08219 152 SPGAYACTYVGTPYYVPPEIWENMP-YNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGS-------------- 216 (255)
T ss_pred ccccccccccCCccccCHHHHccCC-cCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCC--------------
Confidence 322 233467889999999986544 8999999999999999999999998776555444433210
Q ss_pred CccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCC
Q 012233 371 YTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAH 420 (468)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~h 420 (468)
+ ..++..++..+.+||.+||+.||.+||++.+++.-
T Consensus 217 -----~---------~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 217 -----Y---------KPLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred -----C---------CCCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 0 00223478889999999999999999999999863
No 254
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=1.2e-39 Score=327.96 Aligned_cols=249 Identities=23% Similarity=0.327 Sum_probs=191.0
Q ss_pred ccceEEeceecccCceEEEEEEE-----cCCCCEEEEEEeeccc-----chHHHHHHHHHHc-CCCCcccccceeeecCC
Q 012233 136 TISYMAERVVGTGSFGVVFQAKC-----LETGDSVAIKKVLQDK-----RYKNRELQIMRLL-NHPNVVSLKHCFFSTTE 204 (468)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~-----~~~g~~vaiK~~~~~~-----~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~ 204 (468)
..+|.+.+.||+|+||.||+|.+ ..++..||||++.... ....+|+.+++.+ +||||+++++++
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~----- 108 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGAC----- 108 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeee-----
Confidence 34799999999999999999974 3456789999885432 2345799999999 899999999988
Q ss_pred CCceEEEEEeecccch-HHHHHhhhh------------------------------------------------------
Q 012233 205 KDELYLNLVLEYISET-VYRVSKHYT------------------------------------------------------ 229 (468)
Q Consensus 205 ~~~~~~~lv~e~~~~~-ll~~~~~~~------------------------------------------------------ 229 (468)
.+....++|||||+++ ++..+....
T Consensus 109 ~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 188 (375)
T cd05104 109 TVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRS 188 (375)
T ss_pred ccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccc
Confidence 4444588999999865 433332211
Q ss_pred -----------------hcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCC
Q 012233 230 -----------------RMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP 292 (468)
Q Consensus 230 -----------------~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~ 292 (468)
.....+++..+..++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||+++....
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~-~~ivH~Dlkp~Nill~~~~-~~kl~DfG~a~~~~~ 266 (375)
T cd05104 189 VRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLAS-KNCIHRDLAARNILLTHGR-ITKICDFGLARDIRN 266 (375)
T ss_pred cccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH-CCeeccCCchhhEEEECCC-cEEEecCccceeccC
Confidence 001246788889999999999999998 8999999999999999877 799999999976543
Q ss_pred CCCC---ccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcC
Q 012233 293 GEPN---ISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEIKCMN 368 (468)
Q Consensus 293 ~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 368 (468)
.... ....++..|+|||++.+.. ++.++|||||||++|||++ |..||........+.+++.....
T Consensus 267 ~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~---------- 335 (375)
T cd05104 267 DSNYVVKGNARLPVKWMAPESIFNCV-YTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYR---------- 335 (375)
T ss_pred cccccccCCCCCCcceeChhHhcCCC-CCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCcc----------
Confidence 2211 1233456799999997654 8999999999999999997 89999876555444443331100
Q ss_pred CCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 369 PNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
...+...+.++.+||.+||+.||.+||++.++++
T Consensus 336 -----------------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 369 (375)
T cd05104 336 -----------------MLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQ 369 (375)
T ss_pred -----------------CCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHH
Confidence 0012336789999999999999999999999986
No 255
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=1e-39 Score=317.60 Aligned_cols=255 Identities=26% Similarity=0.418 Sum_probs=202.7
Q ss_pred cceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc----chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEE
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNL 212 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~l 212 (468)
.+|.+.+.||+|+||.||++.+..++..||+|.+.... ....+|+.+++.++||||+++++.+. +....|+
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~-----~~~~~~l 93 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYL-----VGDELWV 93 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheee-----eCCcEEE
Confidence 46999999999999999999998899999999874322 23456899999999999999999884 3445889
Q ss_pred EeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCC
Q 012233 213 VLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP 292 (468)
Q Consensus 213 v~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~ 292 (468)
|+||+.++.+..... ...+++..+..++.|++.||.|||+ +|++|+||||+||+++.++ .++|+|||++.....
T Consensus 94 v~e~~~~~~L~~~~~----~~~l~~~~~~~i~~~l~~al~~LH~-~gi~H~dL~p~Nili~~~~-~~kL~dfg~~~~~~~ 167 (293)
T cd06647 94 VMEYLAGGSLTDVVT----ETCMDEGQIAAVCRECLQALEFLHS-NQVIHRDIKSDNILLGMDG-SVKLTDFGFCAQITP 167 (293)
T ss_pred EEecCCCCcHHHHHh----hcCCCHHHHHHHHHHHHHHHHHHHh-CCEeeccCCHHHEEEcCCC-CEEEccCcceecccc
Confidence 999998765543221 2457888899999999999999998 8999999999999999887 799999998865543
Q ss_pred CC-CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCC
Q 012233 293 GE-PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNY 371 (468)
Q Consensus 293 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 371 (468)
.. ......+++.|+|||.+.+. .++.++|+|||||++|+|++|+.||...+..+.+..+.. .+.+
T Consensus 168 ~~~~~~~~~~~~~y~~PE~~~~~-~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~-~~~~------------ 233 (293)
T cd06647 168 EQSKRSTMVGTPYWMAPEVVTRK-AYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT-NGTP------------ 233 (293)
T ss_pred cccccccccCChhhcCchhhccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhc-CCCC------------
Confidence 32 22334688899999998654 488999999999999999999999987655443222111 0000
Q ss_pred ccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCCCC
Q 012233 372 TEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDP 429 (468)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~~~ 429 (468)
.+ ..+..++..++++|.+||..+|.+||++.+++.||||+..+.-
T Consensus 234 ---~~----------~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~~~~~~ 278 (293)
T cd06647 234 ---EL----------QNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLKIAKPL 278 (293)
T ss_pred ---CC----------CCccccCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcCccc
Confidence 00 0123467889999999999999999999999999999876543
No 256
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=1.2e-39 Score=314.03 Aligned_cols=253 Identities=27% Similarity=0.464 Sum_probs=201.5
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeecc-----cchHHHHHHHHHHcC---CCCcccccceeeecCCCCceE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD-----KRYKNRELQIMRLLN---HPNVVSLKHCFFSTTEKDELY 209 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~-----~~~~~~E~~il~~l~---hpnIv~l~~~~~~~~~~~~~~ 209 (468)
.|.+.+.||.|+||.||+|.+..+++.||+|.+... .....+|+.+++.+. ||||+++++++. +..+
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~-----~~~~ 76 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYL-----KGPR 76 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeee-----eCCE
Confidence 388889999999999999999999999999987543 123457899999997 999999999883 3446
Q ss_pred EEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccc
Q 012233 210 LNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (468)
Q Consensus 210 ~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~ 289 (468)
.|+||||+.++.+..... ...+++..+..++.|++.||.|||+ .||+|+||+|+||+++.++ .++|+|||++..
T Consensus 77 ~~lv~e~~~~~~L~~~~~----~~~l~~~~~~~i~~~i~~~l~~lh~-~~i~H~dl~p~ni~i~~~~-~~~l~dfg~~~~ 150 (277)
T cd06917 77 LWIIMEYAEGGSVRTLMK----AGPIAEKYISVIIREVLVALKYIHK-VGVIHRDIKAANILVTNTG-NVKLCDFGVAAL 150 (277)
T ss_pred EEEEEecCCCCcHHHHHH----ccCCCHHHHHHHHHHHHHHHHHHHh-CCcccCCcCHHHEEEcCCC-CEEEccCCceee
Confidence 889999998765543322 2368899999999999999999998 8999999999999999877 799999999977
Q ss_pred cCCCC-CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcC
Q 012233 290 LVPGE-PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMN 368 (468)
Q Consensus 290 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 368 (468)
..... ......|+..|+|||.+.+...++.++|+|||||++|+|++|..||...........+..
T Consensus 151 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~-------------- 216 (277)
T cd06917 151 LNQNSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPK-------------- 216 (277)
T ss_pred cCCCccccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhcccc--------------
Confidence 64432 233457889999999987655578999999999999999999999977654332221110
Q ss_pred CCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCCC
Q 012233 369 PNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRD 428 (468)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~~ 428 (468)
...+.+ ....++.++.++|.+||+.||.+||++.+++.||||++...
T Consensus 217 -----~~~~~~--------~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~~~~~~~ 263 (277)
T cd06917 217 -----SKPPRL--------EDNGYSKLLREFVAACLDEEPKERLSAEELLKSKWIKAHSK 263 (277)
T ss_pred -----CCCCCC--------CcccCCHHHHHHHHHHcCCCcccCcCHHHHhhChHhhcccc
Confidence 000000 01126789999999999999999999999999999987553
No 257
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=1.4e-39 Score=313.91 Aligned_cols=251 Identities=25% Similarity=0.367 Sum_probs=201.6
Q ss_pred eEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc-----chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEEE
Q 012233 139 YMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLV 213 (468)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv 213 (468)
|.+.+.||.|+||.||+|.+..++..||||.+.... ..+.+|+.+++.++||||+++++++ .+..+.|+|
T Consensus 6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-----~~~~~~~lv 80 (277)
T cd06641 6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY-----LKDTKLWII 80 (277)
T ss_pred hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEE-----EeCCeEEEE
Confidence 788889999999999999998899999999875332 2345799999999999999999988 344468899
Q ss_pred eecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCCC
Q 012233 214 LEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPG 293 (468)
Q Consensus 214 ~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~~ 293 (468)
|||++++.+..... ...+++..+..++.|++.||.|||+ .|++|+||||+||+++.++ .++|+|||++......
T Consensus 81 ~e~~~~~~l~~~i~----~~~~~~~~~~~~~~~l~~~l~~lh~-~~i~h~dl~p~Ni~i~~~~-~~~l~dfg~~~~~~~~ 154 (277)
T cd06641 81 MEYLGGGSALDLLE----PGPLDETQIATILREILKGLDYLHS-EKKIHRDIKAANVLLSEHG-EVKLADFGVAGQLTDT 154 (277)
T ss_pred EEeCCCCcHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHcc-CCeecCCCCHHhEEECCCC-CEEEeecccceecccc
Confidence 99999765543221 3457899999999999999999998 8999999999999999887 7999999998765432
Q ss_pred C-CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCCc
Q 012233 294 E-PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYT 372 (468)
Q Consensus 294 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 372 (468)
. ......++..|+|||.+.+. .++.++|+|||||++|+|++|..||...........+... .
T Consensus 155 ~~~~~~~~~~~~y~~PE~~~~~-~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~-~--------------- 217 (277)
T cd06641 155 QIKRNTFVGTPFWMAPEVIKQS-AYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKN-N--------------- 217 (277)
T ss_pred hhhhccccCCccccChhhhccC-CCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhcC-C---------------
Confidence 2 12234678899999998654 4788999999999999999999999765544333322110 0
Q ss_pred cCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCCCC
Q 012233 373 EFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDP 429 (468)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~~~ 429 (468)
. ..+...++.++.++|.+||+.+|.+||++.+++.||||......
T Consensus 218 ---~---------~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~~~~~~~ 262 (277)
T cd06641 218 ---P---------PTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFIVRFAKK 262 (277)
T ss_pred ---C---------CCCCcccCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhhhhhc
Confidence 0 01234578899999999999999999999999999999885443
No 258
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=3.3e-39 Score=306.57 Aligned_cols=250 Identities=30% Similarity=0.492 Sum_probs=203.1
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc------chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~ 211 (468)
+|.+.+.||.|+||.||++.+..++..|++|++.... ....+|+++++.++|+|++++++.+.. ....+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~-----~~~~~ 75 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEE-----KGKLC 75 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEec-----CCEEE
Confidence 4889999999999999999998899999999986432 234579999999999999999998843 35688
Q ss_pred EEeecccch-HHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCcccc
Q 012233 212 LVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (468)
Q Consensus 212 lv~e~~~~~-ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~ 290 (468)
+|+||++++ +...+.........+++..+..++.|++.||.|||+ .|++|+||+|+||+++.++ .++|+|||.+...
T Consensus 76 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~-~~~~H~dl~~~nil~~~~~-~~~l~d~~~~~~~ 153 (258)
T cd08215 76 IVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHS-RKILHRDIKPQNIFLTSNG-LVKLGDFGISKVL 153 (258)
T ss_pred EEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHh-CCEecccCChHHeEEcCCC-cEEECCccceeec
Confidence 999999875 444443332234678999999999999999999998 8999999999999999877 7999999999765
Q ss_pred CCCC-CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCC
Q 012233 291 VPGE-PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP 369 (468)
Q Consensus 291 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 369 (468)
.... ......|++.|+|||.+.+.. ++.++|+||+|+++|+|++|..||...+..+....+....
T Consensus 154 ~~~~~~~~~~~~~~~y~~pe~~~~~~-~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~------------- 219 (258)
T cd08215 154 SSTVDLAKTVVGTPYYLSPELCQNKP-YNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQ------------- 219 (258)
T ss_pred ccCcceecceeeeecccChhHhccCC-CCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCC-------------
Confidence 4332 223457889999999986554 8899999999999999999999998776444433332210
Q ss_pred CCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCC
Q 012233 370 NYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (468)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f 423 (468)
.+ .++..++.++.++|.+||..+|.+|||+.++|.||||
T Consensus 220 ------~~---------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 258 (258)
T cd08215 220 ------YP---------PIPSQYSSELRNLVSSLLQKDPEERPSIAQILQSPFI 258 (258)
T ss_pred ------CC---------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCCCC
Confidence 00 0223578899999999999999999999999999998
No 259
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=3.1e-39 Score=308.41 Aligned_cols=252 Identities=33% Similarity=0.472 Sum_probs=202.9
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc-----chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNL 212 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~l 212 (468)
+|++.+.||.|++|.||+|.+..+++.|++|++.... ....+|+.+++.++|+||+++++++ .....+++
T Consensus 2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~l 76 (264)
T cd06623 2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAF-----YKEGEISI 76 (264)
T ss_pred cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEE-----ccCCeEEE
Confidence 5899999999999999999999999999999886542 3456799999999999999999988 34456899
Q ss_pred EeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCC
Q 012233 213 VLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP 292 (468)
Q Consensus 213 v~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~ 292 (468)
||||+.++.+..... ....+++..+..++.|++.||.|||+..|++|+||+|+||+++.++ .++|+|||.+.....
T Consensus 77 v~e~~~~~~L~~~l~---~~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~-~~~l~df~~~~~~~~ 152 (264)
T cd06623 77 VLEYMDGGSLADLLK---KVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKG-EVKIADFGISKVLEN 152 (264)
T ss_pred EEEecCCCcHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCC-CEEEccCccceeccc
Confidence 999999654432221 1366899999999999999999999527999999999999999888 799999999987644
Q ss_pred CCCC-ccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCC--cHHH-HHHHHHHhCCCCHHHHhhcC
Q 012233 293 GEPN-ISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGES--GVDQ-LVEIIKILGTPTREEIKCMN 368 (468)
Q Consensus 293 ~~~~-~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~--~~~~-~~~i~~~~~~~~~~~~~~~~ 368 (468)
.... ....++..|+|||.+.+. .++.++|+||||+++|+|++|..||.... .... ...+.. ..
T Consensus 153 ~~~~~~~~~~~~~y~~pE~~~~~-~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~---~~--------- 219 (264)
T cd06623 153 TLDQCNTFVGTVTYMSPERIQGE-SYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICD---GP--------- 219 (264)
T ss_pred CCCcccceeecccccCHhhhCCC-CCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhc---CC---------
Confidence 3332 245678999999998655 58999999999999999999999997764 2222 222211 00
Q ss_pred CCCccCCCCcccCCCcccccccC-CCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCC
Q 012233 369 PNYTEFKFPQIKAHPWHKIFHKR-MPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLR 427 (468)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~ 427 (468)
.+ .+... ++..+.++|.+||..+|.+||++.++++||||+...
T Consensus 220 -------~~---------~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~~~~~~~~ 263 (264)
T cd06623 220 -------PP---------SLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQHPFIKKAD 263 (264)
T ss_pred -------CC---------CCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhCHHHHhcc
Confidence 00 01223 788999999999999999999999999999998753
No 260
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.5e-42 Score=307.26 Aligned_cols=285 Identities=34% Similarity=0.537 Sum_probs=225.3
Q ss_pred EEeceecccCceEEEEEEEcCCCCEEEEEEeecc------cchHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEEE
Q 012233 140 MAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLV 213 (468)
Q Consensus 140 ~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~------~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv 213 (468)
+-.+.||.|+||.||.+.+..+|+.||+|++..- .....+|+++|.-.+|.|++..++..-...-.--..+|+|
T Consensus 56 ~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~ 135 (449)
T KOG0664|consen 56 QPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVL 135 (449)
T ss_pred CCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHH
Confidence 3446799999999999999999999999988542 2334579999999999999998887622211000126678
Q ss_pred eecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCCC
Q 012233 214 LEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPG 293 (468)
Q Consensus 214 ~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~~ 293 (468)
+|.+..++..++- ..+.++...++.+.+||++||+|||+ .||.||||||.|+||+++- .+||||||+++....+
T Consensus 136 TELmQSDLHKIIV----SPQ~Ls~DHvKVFlYQILRGLKYLHs-A~ILHRDIKPGNLLVNSNC-vLKICDFGLARvee~d 209 (449)
T KOG0664|consen 136 TELMQSDLHKIIV----SPQALTPDHVKVFVYQILRGLKYLHT-ANILHRDIKPGNLLVNSNC-ILKICDFGLARTWDQR 209 (449)
T ss_pred HHHHHhhhhheec----cCCCCCcchhhhhHHHHHhhhHHHhh-cchhhccCCCccEEeccCc-eEEecccccccccchh
Confidence 8888877665443 36778889999999999999999998 8999999999999999887 7999999999876443
Q ss_pred C--CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCC
Q 012233 294 E--PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNY 371 (468)
Q Consensus 294 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 371 (468)
. .....+.|-+|+|||+++|...|+.++||||.|||+.||+..+..|...++.+++..|...+|+|..+.++.....-
T Consensus 210 ~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGA 289 (449)
T KOG0664|consen 210 DRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGA 289 (449)
T ss_pred hhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhh
Confidence 3 23345679999999999999999999999999999999999999999999999999999999999999887543322
Q ss_pred ccCCCCcccCCCcccccc-----cCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCCCCC
Q 012233 372 TEFKFPQIKAHPWHKIFH-----KRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPN 430 (468)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~-----~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~~~~ 430 (468)
..-.+......+....+. ..-..+..+++..+|..||.+|++.++++.|+++.+.+...
T Consensus 290 k~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~e~R~r~ 353 (449)
T KOG0664|consen 290 KNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLEEGRLRF 353 (449)
T ss_pred HHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccccccccceee
Confidence 221111111111111111 13345788999999999999999999999999999877644
No 261
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-40 Score=307.06 Aligned_cols=302 Identities=31% Similarity=0.527 Sum_probs=234.7
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeecc------cchHHHHHHHHHHcCCCCcccccceeeecCC-CCceEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTE-KDELYL 210 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~------~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~-~~~~~~ 210 (468)
+|.-.+.+|.|.- .|..|.+.-.++.||+|++... .+...+|..++..+.|+||++++.+|..... .....+
T Consensus 18 Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~ 96 (369)
T KOG0665|consen 18 RYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEV 96 (369)
T ss_pred eeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhH
Confidence 5888899999998 8888999999999999987443 2334579999999999999999998843322 112237
Q ss_pred EEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCcccc
Q 012233 211 NLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (468)
Q Consensus 211 ~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~ 290 (468)
|+|||++...+...+.. .++-..+..+.+|++.|+.|||+ .||+||||||+||+|..+. .+||.|||+|+..
T Consensus 97 y~v~e~m~~nl~~vi~~------elDH~tis~i~yq~~~~ik~lhs-~~IihRdLkPsnivv~~~~-~lKi~dfg~ar~e 168 (369)
T KOG0665|consen 97 YLVMELMDANLCQVILM------ELDHETISYILYQMLCGIKHLHS-AGIIHRDLKPSNIVVNSDC-TLKILDFGLARTE 168 (369)
T ss_pred HHHHHhhhhHHHHHHHH------hcchHHHHHHHHHHHHHHHHHHh-cceeecccCcccceecchh-heeeccchhhccc
Confidence 89999999888776541 23445688899999999999998 8999999999999999887 8999999999876
Q ss_pred CCCCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcC--
Q 012233 291 VPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMN-- 368 (468)
Q Consensus 291 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~-- 368 (468)
...-....++.|..|.|||++.+.. |...+||||+||++.||++|...|++.+..++..++++.+|.|.+..+..+.
T Consensus 169 ~~~~~mtpyVvtRyyrapevil~~~-~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~ 247 (369)
T KOG0665|consen 169 DTDFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPT 247 (369)
T ss_pred CcccccCchhheeeccCchheeccC-CcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHH
Confidence 5554566788999999999998877 9999999999999999999999999999999999999999999887665433
Q ss_pred --------CCCccCCCCc-ccCCCccccc--ccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCCCCCCCCCCCC
Q 012233 369 --------PNYTEFKFPQ-IKAHPWHKIF--HKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNTCLPNGR 437 (468)
Q Consensus 369 --------~~~~~~~~~~-~~~~~~~~~~--~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~~~~~~~~~~~ 437 (468)
+.+..+.|.. ++...|.... .+.-+..+++|+.+||..||++|.+++++|.||||+-+-+++......+
T Consensus 248 ~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~vw~~~~ev~ap~p 327 (369)
T KOG0665|consen 248 VRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIKVWYDPDEVEAPPP 327 (369)
T ss_pred HHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCeeeeecccccccCCCC
Confidence 3333333332 1222222111 1223456899999999999999999999999999995544544433333
Q ss_pred CCCcccccCHHHH
Q 012233 438 PLPTLFNFTAQEL 450 (468)
Q Consensus 438 ~~~~~~~~~~~~~ 450 (468)
+ +-...|+.++.
T Consensus 328 e-~~d~~~d~~~~ 339 (369)
T KOG0665|consen 328 E-IYDKQLDEREH 339 (369)
T ss_pred c-hhhhhcccccC
Confidence 3 33355553333
No 262
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=4.8e-39 Score=307.88 Aligned_cols=248 Identities=26% Similarity=0.437 Sum_probs=198.2
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeecc---------cchHHHHHHHHHHcCCCCcccccceeeecCCCCce
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD---------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDEL 208 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~---------~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 208 (468)
+|.+.+.||+|+||.||+|.+..++..||+|.+... ...+.+|+.+++.++|+||+++++++... ...
T Consensus 3 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~---~~~ 79 (264)
T cd06653 3 NWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDP---EEK 79 (264)
T ss_pred ceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcC---CCC
Confidence 599999999999999999999999999999987422 12345799999999999999999987432 233
Q ss_pred EEEEEeecccchHHH-HHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCc
Q 012233 209 YLNLVLEYISETVYR-VSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSA 287 (468)
Q Consensus 209 ~~~lv~e~~~~~ll~-~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a 287 (468)
.+++||||++++.+. .+. ....+++..++.++.||+.||.|||+ .||+|+||||+||+++.++ .++|+|||++
T Consensus 80 ~~~~v~e~~~~~~L~~~~~----~~~~l~~~~~~~~~~~i~~al~~LH~-~~i~H~dl~p~ni~i~~~~-~~~l~dfg~~ 153 (264)
T cd06653 80 KLSIFVEYMPGGSIKDQLK----AYGALTENVTRRYTRQILQGVSYLHS-NMIVHRDIKGANILRDSAG-NVKLGDFGAS 153 (264)
T ss_pred EEEEEEEeCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHh-CCEecCCCCHHHEEEcCCC-CEEECccccc
Confidence 578999999876443 322 23457888999999999999999998 8999999999999999887 7999999999
Q ss_pred cccCCC----CCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHH
Q 012233 288 KMLVPG----EPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREE 363 (468)
Q Consensus 288 ~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~ 363 (468)
+..... .......++..|+|||.+.+.. ++.++|+|||||++|+|++|+.||........+.++.. .+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~---~~---- 225 (264)
T cd06653 154 KRIQTICMSGTGIKSVTGTPYWMSPEVISGEG-YGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIAT---QP---- 225 (264)
T ss_pred cccccccccCccccccCCcccccCHhhhcCCC-CCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHc---CC----
Confidence 765321 1122456889999999997644 88999999999999999999999987655544433321 11
Q ss_pred HhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCC
Q 012233 364 IKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (468)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f 423 (468)
....++..+++.+.++|.+||. +|..||++.+++.|||.
T Consensus 226 --------------------~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~~~~ 264 (264)
T cd06653 226 --------------------TKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRHPFV 264 (264)
T ss_pred --------------------CCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcCCCC
Confidence 1112445688999999999999 57999999999999984
No 263
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=1.7e-39 Score=314.07 Aligned_cols=248 Identities=23% Similarity=0.302 Sum_probs=194.9
Q ss_pred cceEEeceecccCceEEEEEEEcCCC-----CEEEEEEeeccc-----chHHHHHHHHHHcCCCCcccccceeeecCCCC
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLETG-----DSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKD 206 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g-----~~vaiK~~~~~~-----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 206 (468)
.+|++.+.||+|+||.||+|.+...+ ..||+|.+.... ..+.+|+.+++.++||||+++++++ .+
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~-----~~ 79 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVC-----TK 79 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEE-----cC
Confidence 46899999999999999999976555 679999885432 2345799999999999999999987 33
Q ss_pred ceEEEEEeecccchHH-HHHhhhhh------------cCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeec
Q 012233 207 ELYLNLVLEYISETVY-RVSKHYTR------------MNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVN 273 (468)
Q Consensus 207 ~~~~~lv~e~~~~~ll-~~~~~~~~------------~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~ 273 (468)
....|++|||+.++.+ +.+..... ....+++..+..++.||+.||.|||+ +||+|+||||+|||++
T Consensus 80 ~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~-~~i~H~dlkp~Nil~~ 158 (283)
T cd05048 80 EQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSS-HHFVHRDLAARNCLVG 158 (283)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHh-CCeeccccccceEEEc
Confidence 4458899999986544 33332111 11457888899999999999999998 8999999999999999
Q ss_pred CCCCcEEEeeecCccccCCCC---CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHH
Q 012233 274 PHTHQLKICDFGSAKMLVPGE---PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQL 349 (468)
Q Consensus 274 ~~~~~vkL~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~ 349 (468)
.++ .++|+|||++....... ......+++.|+|||.+.+.. ++.++|||||||++|||++ |..||.+.+..+..
T Consensus 159 ~~~-~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~ 236 (283)
T cd05048 159 EGL-TVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGK-FTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVI 236 (283)
T ss_pred CCC-cEEECCCcceeeccccccccccCCCcccccccCHHHhccCc-CchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHH
Confidence 887 79999999987653322 122345678899999986544 8999999999999999998 99999887765544
Q ss_pred HHHHHHhCCCCHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCC
Q 012233 350 VEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAH 420 (468)
Q Consensus 350 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~h 420 (468)
..+..... + ..+..+++++.+|+.+||+.||.+||++.+++++
T Consensus 237 ~~i~~~~~-------------------~---------~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~ 279 (283)
T cd05048 237 EMIRSRQL-------------------L---------PCPEDCPARVYALMIECWNEIPARRPRFKDIHTR 279 (283)
T ss_pred HHHHcCCc-------------------C---------CCcccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 44332100 0 0224578999999999999999999999999873
No 264
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=3.8e-39 Score=312.74 Aligned_cols=257 Identities=23% Similarity=0.315 Sum_probs=195.8
Q ss_pred cccceEEeceecccCceEEEEEEEcC-----CCCEEEEEEeecccc-----hHHHHHHHHHHcCCCCcccccceeeecCC
Q 012233 135 QTISYMAERVVGTGSFGVVFQAKCLE-----TGDSVAIKKVLQDKR-----YKNRELQIMRLLNHPNVVSLKHCFFSTTE 204 (468)
Q Consensus 135 ~~~~y~~~~~lG~G~fg~Vy~~~~~~-----~g~~vaiK~~~~~~~-----~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 204 (468)
..++|.+.+.||+|+||.||+|.++. .+..||+|.+..... ...+|+.+++.++||||+++++++
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~----- 78 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVV----- 78 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEE-----
Confidence 34579999999999999999997642 345799998754322 234688999999999999999987
Q ss_pred CCceEEEEEeecccchHH-HHHhhhhhc------CCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCC
Q 012233 205 KDELYLNLVLEYISETVY-RVSKHYTRM------NQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTH 277 (468)
Q Consensus 205 ~~~~~~~lv~e~~~~~ll-~~~~~~~~~------~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~ 277 (468)
.+....|+||||+.++.+ +.+...... ........+..++.||+.||.|||+ +||+||||||+|||++.++
T Consensus 79 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~-~~i~H~dikp~nili~~~~- 156 (288)
T cd05061 79 SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA-KKFVHRDLAARNCMVAHDF- 156 (288)
T ss_pred cCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcCCCCChheEEEcCCC-
Confidence 333458899999986544 443322111 1234567788899999999999998 8999999999999999887
Q ss_pred cEEEeeecCccccCCCCC---CccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHH
Q 012233 278 QLKICDFGSAKMLVPGEP---NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEII 353 (468)
Q Consensus 278 ~vkL~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~~~i~ 353 (468)
.++|+|||+++....... .....++..|+|||.+.+.. ++.++|+|||||++|||++ |..||.+....+....+.
T Consensus 157 ~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~-~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~ 235 (288)
T cd05061 157 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVM 235 (288)
T ss_pred cEEECcCCccccccccccccccCCCcccccccCHHHhccCC-CChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence 799999999876533221 11234467899999986544 8999999999999999998 789998766555443332
Q ss_pred HHhCCCCHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC------CCCCCCCC
Q 012233 354 KILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA------HPFFDDLR 427 (468)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~------hp~f~~~~ 427 (468)
.. +. . .++...++.+.++|.+||+.||.+|||+.++++ ||||.++.
T Consensus 236 ~~-~~---------------~------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~~~ 287 (288)
T cd05061 236 DG-GY---------------L------------DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEVS 287 (288)
T ss_pred cC-CC---------------C------------CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCCCCC
Confidence 20 00 0 022346789999999999999999999999986 99998763
No 265
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=4e-39 Score=312.19 Aligned_cols=254 Identities=28% Similarity=0.432 Sum_probs=202.1
Q ss_pred eEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc----chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEEEe
Q 012233 139 YMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVL 214 (468)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv~ 214 (468)
|.-.+.||+|++|.||++.+..+++.+++|++.... ....+|+.+++.++||||+++++++. ...+.++|+
T Consensus 21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~-----~~~~~~~v~ 95 (285)
T cd06648 21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYL-----VGDELWVVM 95 (285)
T ss_pred hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEE-----cCCeEEEEE
Confidence 444568999999999999998899999999875332 23457899999999999999999874 334588999
Q ss_pred ecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCCCC
Q 012233 215 EYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGE 294 (468)
Q Consensus 215 e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~~~ 294 (468)
||+.++.+..... ...+++..+..++.||+.||+|||+ +||+||||+|+||+++.++ .++|+|||.+.......
T Consensus 96 e~~~~~~L~~~~~----~~~~~~~~~~~~~~ql~~~l~~lH~-~~i~H~dl~p~Nil~~~~~-~~~l~d~g~~~~~~~~~ 169 (285)
T cd06648 96 EFLEGGALTDIVT----HTRMNEEQIATVCLAVLKALSFLHA-QGVIHRDIKSDSILLTSDG-RVKLSDFGFCAQVSKEV 169 (285)
T ss_pred eccCCCCHHHHHH----hCCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCChhhEEEcCCC-cEEEcccccchhhccCC
Confidence 9998765543222 1457888999999999999999998 8999999999999999887 79999999886553322
Q ss_pred -CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCCcc
Q 012233 295 -PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTE 373 (468)
Q Consensus 295 -~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 373 (468)
......|++.|+|||.+.+.. ++.++|+|||||++|+|++|..||...+....+..+... ..+
T Consensus 170 ~~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~-~~~-------------- 233 (285)
T cd06648 170 PRRKSLVGTPYWMAPEVISRLP-YGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDN-LPP-------------- 233 (285)
T ss_pred cccccccCCccccCHHHhcCCC-CCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhc-CCC--------------
Confidence 223356899999999987654 899999999999999999999999876655544433321 000
Q ss_pred CCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCCCCC
Q 012233 374 FKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPN 430 (468)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~~~~ 430 (468)
.+ .....++..+.+||.+||+.||.+||++.+++.||||+..+++.
T Consensus 234 ----~~-------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~~~ 279 (285)
T cd06648 234 ----KL-------KNLHKVSPRLRSFLDRMLVRDPAQRATAAELLNHPFLAKAGPPS 279 (285)
T ss_pred ----CC-------cccccCCHHHHHHHHHHcccChhhCcCHHHHccCcccccCCCcc
Confidence 00 01123678999999999999999999999999999999977643
No 266
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=1.7e-39 Score=315.90 Aligned_cols=259 Identities=28% Similarity=0.420 Sum_probs=205.9
Q ss_pred eEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc----chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEEEe
Q 012233 139 YMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVL 214 (468)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv~ 214 (468)
|.....||+|+||.||++....+|+.||||++.... ....+|+.+++.++|+||+++++++. ...+.++||
T Consensus 22 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~~~~~~lv~ 96 (292)
T cd06657 22 LDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL-----VGDELWVVM 96 (292)
T ss_pred hhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEE-----eCCEEEEEE
Confidence 444567999999999999999999999999874322 23456999999999999999999884 344689999
Q ss_pred ecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCCCC
Q 012233 215 EYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGE 294 (468)
Q Consensus 215 e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~~~ 294 (468)
||++++.+..... ...+++..++.++.|++.||+|||+ .||+|+||+|+||+++.++ .++|+|||++.......
T Consensus 97 e~~~~~~L~~~~~----~~~~~~~~~~~~~~ql~~~l~~lH~-~givH~dl~p~Nilv~~~~-~~~l~dfg~~~~~~~~~ 170 (292)
T cd06657 97 EFLEGGALTDIVT----HTRMNEEQIAAVCLAVLKALSVLHA-QGVIHRDIKSDSILLTHDG-RVKLSDFGFCAQVSKEV 170 (292)
T ss_pred ecCCCCcHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEECCCC-CEEEcccccceeccccc
Confidence 9999876654322 3457889999999999999999998 8999999999999999887 79999999986554322
Q ss_pred -CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCCcc
Q 012233 295 -PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTE 373 (468)
Q Consensus 295 -~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 373 (468)
......+++.|+|||.+.+. .++.++|+|||||++|+|++|..||.+....+.+..+..... +
T Consensus 171 ~~~~~~~~~~~y~~pE~~~~~-~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~~-----------~---- 234 (292)
T cd06657 171 PRRKSLVGTPYWMAPELISRL-PYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP-----------P---- 234 (292)
T ss_pred ccccccccCccccCHHHhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCC-----------c----
Confidence 22345678999999988644 478999999999999999999999987665544443322110 0
Q ss_pred CCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCCCCCCCCCC
Q 012233 374 FKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNTCLPN 435 (468)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~~~~~~~~~ 435 (468)
.+. ....+++.+.++|.+||+.||.+||++.+++.||||.....+++.+++
T Consensus 235 -~~~----------~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~~~~~~~~~~~~~~~~ 285 (292)
T cd06657 235 -KLK----------NLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPSCIVPL 285 (292)
T ss_pred -ccC----------CcccCCHHHHHHHHHHHhCCcccCcCHHHHhcChHHhccCCCcccccH
Confidence 000 113468899999999999999999999999999999998877764443
No 267
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=6.5e-39 Score=315.00 Aligned_cols=248 Identities=28% Similarity=0.432 Sum_probs=201.5
Q ss_pred eEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc-------chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEE
Q 012233 139 YMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (468)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~ 211 (468)
|...+.||+|+||.||+|.+..+|..|++|++.... ....+|+.+++.++|||++++++++. +....|
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~~ 97 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYL-----KEHTAW 97 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEE-----eCCEEE
Confidence 677788999999999999999999999999885321 22456899999999999999999884 444688
Q ss_pred EEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccC
Q 012233 212 LVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (468)
Q Consensus 212 lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~ 291 (468)
+||||+.++++..+.. ....+++..+..++.||+.||.|||+ .||+|+||||+||+++.++ .+||+|||++....
T Consensus 98 lv~e~~~~~l~~~l~~---~~~~l~~~~~~~~~~qi~~al~~LH~-~gi~H~dl~p~nili~~~~-~~kL~dfg~~~~~~ 172 (313)
T cd06633 98 LVMEYCLGSASDLLEV---HKKPLQEVEIAAITHGALQGLAYLHS-HNMIHRDIKAGNILLTEPG-QVKLADFGSASKSS 172 (313)
T ss_pred EEEecCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCChhhEEECCCC-CEEEeecCCCcccC
Confidence 9999999887765432 23568889999999999999999998 8999999999999999887 79999999986432
Q ss_pred CCCCCccccccCCccccccccC--CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCC
Q 012233 292 PGEPNISYICSRYYRAPELIFG--ATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP 369 (468)
Q Consensus 292 ~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 369 (468)
......|+..|+|||++.. ...++.++|||||||++|+|++|..||...+.......+.... .
T Consensus 173 ---~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~-~----------- 237 (313)
T cd06633 173 ---PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQND-S----------- 237 (313)
T ss_pred ---CCCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcC-C-----------
Confidence 2335678899999999842 2347889999999999999999999998876655555443210 0
Q ss_pred CCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCC
Q 012233 370 NYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDL 426 (468)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~ 426 (468)
+. .....++..+++||.+||+.+|.+||++.+++.||||+..
T Consensus 238 -------~~--------~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~~~~~~ 279 (313)
T cd06633 238 -------PT--------LQSNEWTDSFRGFVDYCLQKIPQERPASAELLRHDFVRRD 279 (313)
T ss_pred -------CC--------CCccccCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCC
Confidence 00 0113367789999999999999999999999999999863
No 268
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=4.2e-39 Score=308.12 Aligned_cols=245 Identities=22% Similarity=0.324 Sum_probs=194.4
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeecccc---hHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEEEe
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKR---YKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVL 214 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~~---~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv~ 214 (468)
.|.+.+.||+|+||.||+|.+..++..||+|.+..+.. ...+|+.+++.++|+||+++++++ .....+++||
T Consensus 7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~lv~ 81 (263)
T cd05052 7 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC-----TREPPFYIIT 81 (263)
T ss_pred HeEEeeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhCCCCChhheEEEE-----cCCCCcEEEE
Confidence 58999999999999999999999999999998865432 345799999999999999999987 3344588999
Q ss_pred ecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCCCC
Q 012233 215 EYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGE 294 (468)
Q Consensus 215 e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~~~ 294 (468)
||++++.+...... .....+++..+..++.|++.||+|||+ +||+||||||+|||++.++ .+||+|||++.......
T Consensus 82 e~~~~~~L~~~~~~-~~~~~l~~~~~~~~~~ql~~~l~~lH~-~~i~H~dlkp~nil~~~~~-~~kl~df~~~~~~~~~~ 158 (263)
T cd05052 82 EFMTYGNLLDYLRE-CNRQEVNAVVLLYMATQISSAMEYLEK-KNFIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDT 158 (263)
T ss_pred EeCCCCcHHHHHHh-CCCCCCCHHHHHHHHHHHHHHHHHHHh-CCEeecccCcceEEEcCCC-cEEeCCCccccccccce
Confidence 99986644422211 123458888999999999999999998 8999999999999999887 79999999987654332
Q ss_pred CC--ccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCC
Q 012233 295 PN--ISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNY 371 (468)
Q Consensus 295 ~~--~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 371 (468)
.. ....++..|+|||.+.+.. ++.++|||||||++|||++ |..||.+.+..+....+...
T Consensus 159 ~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~---------------- 221 (263)
T cd05052 159 YTAHAGAKFPIKWTAPESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKG---------------- 221 (263)
T ss_pred eeccCCCCCccccCCHHHhccCC-CCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCC----------------
Confidence 11 1223456799999986554 8999999999999999998 99999876654443333211
Q ss_pred ccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 372 TEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
+. ..++..++.++.++|.+||+.||++||++.++++
T Consensus 222 --~~----------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~ 257 (263)
T cd05052 222 --YR----------MERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQ 257 (263)
T ss_pred --CC----------CCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 00 0123457899999999999999999999999875
No 269
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=2.9e-39 Score=308.37 Aligned_cols=243 Identities=33% Similarity=0.557 Sum_probs=195.6
Q ss_pred ecccCceEEEEEEEcCCCCEEEEEEeecccc-------hHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEEEeecc
Q 012233 145 VGTGSFGVVFQAKCLETGDSVAIKKVLQDKR-------YKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVLEYI 217 (468)
Q Consensus 145 lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~~-------~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv~e~~ 217 (468)
||.|+||.||++.+..+|+.+++|.+..... ...+|+.+++.++||||+++++.+ ......|+||||+
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~-----~~~~~~~lv~e~~ 75 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSF-----QGKKNLYLVMEYL 75 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHhe-----ecCcEEEEEEecC
Confidence 6899999999999998999999998854422 345688999999999999999887 4455689999999
Q ss_pred cchHHH-HHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCCCC--
Q 012233 218 SETVYR-VSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGE-- 294 (468)
Q Consensus 218 ~~~ll~-~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~~~-- 294 (468)
.++.+. .+.. ...+++..+..++.||+.||.|||+ .|++|+||+|+||+++.++ .++|+|||++.......
T Consensus 76 ~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~L~~lH~-~~i~H~di~~~nil~~~~~-~~~l~dfg~~~~~~~~~~~ 149 (265)
T cd05579 76 PGGDLASLLEN----VGSLDEDVARIYIAEIVLALEYLHS-NGIIHRDLKPDNILIDSNG-HLKLTDFGLSKVGLVRRQI 149 (265)
T ss_pred CCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHH-cCeecCCCCHHHeEEcCCC-CEEEEecccchhcccCccc
Confidence 875443 3322 2368999999999999999999998 8999999999999999888 79999999987543321
Q ss_pred -------CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhc
Q 012233 295 -------PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCM 367 (468)
Q Consensus 295 -------~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 367 (468)
......++..|+|||.+.+.. ++.++|+||||+++|+|++|..||......+....+...
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~Pe~~~~~~-~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~------------ 216 (265)
T cd05579 150 NLNDDEKEDKRIVGTPDYIAPEVILGQG-HSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNG------------ 216 (265)
T ss_pred ccccccccccCcccCccccCHHHhcCCC-CCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC------------
Confidence 122346788999999986655 889999999999999999999999877655544443220
Q ss_pred CCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCH---HHHhCCCCCCCC
Q 012233 368 NPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTA---LEACAHPFFDDL 426 (468)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~---~ell~hp~f~~~ 426 (468)
...++. ...++..+.+||.+||+.+|.+|||+ .++|+||||+++
T Consensus 217 -----~~~~~~----------~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~~~~ 263 (265)
T cd05579 217 -----KIEWPE----------DVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFKGI 263 (265)
T ss_pred -----CcCCCc----------cccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCccccCC
Confidence 111111 01148899999999999999999999 999999999875
No 270
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=3e-39 Score=317.24 Aligned_cols=281 Identities=19% Similarity=0.260 Sum_probs=195.0
Q ss_pred eEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc------chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEE
Q 012233 139 YMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNL 212 (468)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~l 212 (468)
|.+++.+|.|+ .||.++...+++.||+|++.... ....+|+.+++.++|+||++++++| ......++
T Consensus 4 ~~i~~~~~~~~--~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~-----~~~~~~~~ 76 (314)
T cd08216 4 TLIGKCFEDLM--IVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSF-----IVDSELYV 76 (314)
T ss_pred hhhhHhhcCCc--eEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhhee-----ecCCeEEE
Confidence 34444455554 45555556699999999985431 2455799999999999999999988 34445899
Q ss_pred EeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCC
Q 012233 213 VLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP 292 (468)
Q Consensus 213 v~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~ 292 (468)
+|||++++.+..+.... ....+++..+..++.||+.||+|||+ +||+||||||+|||++.++ .+||+|||.+.....
T Consensus 77 ~~e~~~~~~l~~~l~~~-~~~~~~~~~~~~~~~~l~~~L~~LH~-~~ivH~dlk~~Nili~~~~-~~kl~d~~~~~~~~~ 153 (314)
T cd08216 77 VSPLMAYGSCEDLLKTH-FPEGLPELAIAFILKDVLNALDYIHS-KGFIHRSVKASHILLSGDG-KVVLSGLRYSVSMIK 153 (314)
T ss_pred EEeccCCCCHHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCcceEEEecCC-ceEEecCccceeecc
Confidence 99999976554332211 23458889999999999999999998 8999999999999999887 799999998865532
Q ss_pred CCC--------CccccccCCccccccccCC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHH-
Q 012233 293 GEP--------NISYICSRYYRAPELIFGA-TEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTRE- 362 (468)
Q Consensus 293 ~~~--------~~~~~gt~~y~aPE~~~~~-~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~- 362 (468)
... .....++..|+|||++.+. ..++.++|+|||||++|||++|..||........+.+...........
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 233 (314)
T cd08216 154 HGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDK 233 (314)
T ss_pred ccccccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCcccccc
Confidence 211 1234567789999998653 348899999999999999999999998765544333322211000000
Q ss_pred -HHhhcCCCCcc----CCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCCCCC
Q 012233 363 -EIKCMNPNYTE----FKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPN 430 (468)
Q Consensus 363 -~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~~~~ 430 (468)
........... ...+ .............++.++.+||.+||..||++|||+.++|.||||+.++...
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~~~~~~ 305 (314)
T cd08216 234 STYPLYEDSMSQSRSSNEHP-NNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQCKRRN 305 (314)
T ss_pred CchhhhcCCcCccccccccc-chhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhhhcccc
Confidence 00000000000 0000 0011111222334567899999999999999999999999999999887443
No 271
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=9e-39 Score=303.44 Aligned_cols=251 Identities=33% Similarity=0.479 Sum_probs=201.2
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc------chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~ 211 (468)
+|.+.+.||+|++|.||+|.+..++..|++|++.... ....+|+.++++++|+||+++++++.... ...++
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~---~~~~~ 77 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEE---KNTLN 77 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCC---CCeEE
Confidence 3888899999999999999999899999999885543 24567999999999999999998884321 15688
Q ss_pred EEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccC
Q 012233 212 LVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (468)
Q Consensus 212 lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~ 291 (468)
+|+||+.++.+..... ....+++..++.++.|++.||.|||+ .|++|+||+|+||+++.++ .++|+|||.+....
T Consensus 78 lv~e~~~~~~L~~~~~---~~~~~~~~~~~~~~~~l~~~l~~lh~-~~~~h~dl~p~ni~i~~~~-~~~l~d~~~~~~~~ 152 (260)
T cd06606 78 IFLEYVSGGSLSSLLK---KFGKLPEPVIRKYTRQILEGLAYLHS-NGIVHRDIKGANILVDSDG-VVKLADFGCAKRLG 152 (260)
T ss_pred EEEEecCCCcHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCCHHHEEEcCCC-CEEEcccccEEecc
Confidence 9999997654443222 12378999999999999999999998 8999999999999999877 79999999998775
Q ss_pred CCCC---CccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcC
Q 012233 292 PGEP---NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMN 368 (468)
Q Consensus 292 ~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 368 (468)
.... .....++..|+|||.+.+.. ++.++||||||+++|+|++|..||........ .+.....
T Consensus 153 ~~~~~~~~~~~~~~~~y~~pE~~~~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~--~~~~~~~----------- 218 (260)
T cd06606 153 DIETGEGTGSVRGTPYWMAPEVIRGEE-YGRAADIWSLGCTVIEMATGKPPWSELGNPMA--ALYKIGS----------- 218 (260)
T ss_pred cccccccccCCCCCccccCHhhhcCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCchHH--HHHhccc-----------
Confidence 5443 34567889999999986554 89999999999999999999999987652211 1111000
Q ss_pred CCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCC
Q 012233 369 PNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (468)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f 423 (468)
......++..++..+.+||.+||+.||.+||++.+++.||||
T Consensus 219 -------------~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 260 (260)
T cd06606 219 -------------SGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQHPFL 260 (260)
T ss_pred -------------cCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhCCCC
Confidence 000111334568999999999999999999999999999998
No 272
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=4.2e-39 Score=313.87 Aligned_cols=247 Identities=22% Similarity=0.285 Sum_probs=190.0
Q ss_pred ceEEeceecccCceEEEEEEEcCCCC--EEEEEEeeccc-----chHHHHHHHHHHc-CCCCcccccceeeecCCCCceE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGD--SVAIKKVLQDK-----RYKNRELQIMRLL-NHPNVVSLKHCFFSTTEKDELY 209 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~--~vaiK~~~~~~-----~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~~~~ 209 (468)
+|.+.+.||+|+||.||+|.+..++. .+++|.+.... ..+.+|+.++.++ +||||+++++++ .....
T Consensus 3 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~-----~~~~~ 77 (297)
T cd05089 3 DIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGAC-----ENRGY 77 (297)
T ss_pred cceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEE-----ccCCc
Confidence 59999999999999999999877765 46888775321 2345799999999 799999999987 34445
Q ss_pred EEEEeecccch-HHHHHhhhh------------hcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCC
Q 012233 210 LNLVLEYISET-VYRVSKHYT------------RMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHT 276 (468)
Q Consensus 210 ~~lv~e~~~~~-ll~~~~~~~------------~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~ 276 (468)
+++||||++++ +.+.+.... .....+++..++.++.||+.||+|||+ +||+||||||+|||++.++
T Consensus 78 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~-~~ivH~dlkp~Nill~~~~ 156 (297)
T cd05089 78 LYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSE-KQFIHRDLAARNVLVGENL 156 (297)
T ss_pred ceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHH-CCcccCcCCcceEEECCCC
Confidence 88999999865 444432211 012357889999999999999999998 8999999999999999887
Q ss_pred CcEEEeeecCccccCCCCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHH
Q 012233 277 HQLKICDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKI 355 (468)
Q Consensus 277 ~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~ 355 (468)
.+||+|||++..............+..|+|||++.+.. ++.++|||||||++|||++ |..||......+....+...
T Consensus 157 -~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~~ 234 (297)
T cd05089 157 -ASKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSV-YTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQG 234 (297)
T ss_pred -eEEECCcCCCccccceeccCCCCcCccccCchhhccCC-CCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcC
Confidence 79999999986432211222223356799999986544 8999999999999999997 99999887665544443221
Q ss_pred hCCCCHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCC
Q 012233 356 LGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAH 420 (468)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~h 420 (468)
.. ...+..++.++.+||.+||+.||.+||+++++++.
T Consensus 235 ~~----------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~ 271 (297)
T cd05089 235 YR----------------------------MEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQ 271 (297)
T ss_pred CC----------------------------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 00 00223578899999999999999999999999763
No 273
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=4.8e-39 Score=344.93 Aligned_cols=141 Identities=25% Similarity=0.400 Sum_probs=120.9
Q ss_pred cceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc-------chHHHHHHHHHHcCCCCcccccceeeecCCCCceE
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELY 209 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~ 209 (468)
.+|.+.+.||+|+||.||+|.+..+++.||||++.... ..+.+|+.+++.++||||+++++++ ....+
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~-----~~~~~ 78 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSL-----QSANN 78 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEE-----EECCE
Confidence 46999999999999999999999999999999986532 3456799999999999999999877 34446
Q ss_pred EEEEeecccchHH-HHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCcc
Q 012233 210 LNLVLEYISETVY-RVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAK 288 (468)
Q Consensus 210 ~~lv~e~~~~~ll-~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~ 288 (468)
+||||||+.++.+ .++.. ...+++..++.++.||+.||.|||. +|||||||||+||||+.++ .+||+|||+++
T Consensus 79 ~~lVmEy~~g~~L~~li~~----~~~l~~~~~~~i~~qil~aL~yLH~-~gIiHrDLKP~NILl~~~g-~vkL~DFGls~ 152 (669)
T cd05610 79 VYLVMEYLIGGDVKSLLHI----YGYFDEEMAVKYISEVALALDYLHR-HGIIHRDLKPDNMLISNEG-HIKLTDFGLSK 152 (669)
T ss_pred EEEEEeCCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHh-CCEEeCCccHHHEEEcCCC-CEEEEeCCCCc
Confidence 8999999976544 43322 3457888999999999999999998 8999999999999999888 79999999875
No 274
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=3.3e-39 Score=320.22 Aligned_cols=250 Identities=25% Similarity=0.349 Sum_probs=191.5
Q ss_pred cceEEeceecccCceEEEEEEEcC-----CCCEEEEEEeeccc-----chHHHHHHHHHHc-CCCCcccccceeeecCCC
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLE-----TGDSVAIKKVLQDK-----RYKNRELQIMRLL-NHPNVVSLKHCFFSTTEK 205 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~-----~g~~vaiK~~~~~~-----~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~ 205 (468)
++|++.+.||.|+||.||+|.+.. +++.||+|++.... ....+|+.+++++ +|+||+++++++...
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~--- 83 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKP--- 83 (337)
T ss_pred HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecC---
Confidence 469999999999999999997543 45789999885432 2234699999999 799999999987533
Q ss_pred CceEEEEEeecccchHHHHHhhhhh-------------------------------------------------------
Q 012233 206 DELYLNLVLEYISETVYRVSKHYTR------------------------------------------------------- 230 (468)
Q Consensus 206 ~~~~~~lv~e~~~~~ll~~~~~~~~------------------------------------------------------- 230 (468)
...++++|||+.++.+........
T Consensus 84 -~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (337)
T cd05054 84 -GGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEG 162 (337)
T ss_pred -CCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhh
Confidence 235789999999765543221110
Q ss_pred ---cCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCCCCC---CccccccCC
Q 012233 231 ---MNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGEP---NISYICSRY 304 (468)
Q Consensus 231 ---~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~~~~---~~~~~gt~~ 304 (468)
....+++..+..++.||+.||.|||+ +||+||||||+|||++.++ .++|+|||++..+..... .....++..
T Consensus 163 ~~~~~~~l~~~~~~~~~~qi~~aL~~lH~-~~ivHrDikp~Nill~~~~-~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~ 240 (337)
T cd05054 163 DELYKEPLTLEDLISYSFQVARGMEFLAS-RKCIHRDLAARNILLSENN-VVKICDFGLARDIYKDPDYVRKGDARLPLK 240 (337)
T ss_pred hHHhhcCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCcceEEEeCCC-cEEEeccccchhcccCcchhhccCCCCCcc
Confidence 12367888999999999999999998 8999999999999999887 799999999986533221 122345678
Q ss_pred ccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCCccCCCCcccCCC
Q 012233 305 YRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHP 383 (468)
Q Consensus 305 y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (468)
|+|||++.+.. ++.++|||||||++|||++ |..||.+....+.+...+..... .
T Consensus 241 y~aPE~~~~~~-~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~---------------~--------- 295 (337)
T cd05054 241 WMAPESIFDKV-YTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTR---------------M--------- 295 (337)
T ss_pred ccCcHHhcCCC-CCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCC---------------C---------
Confidence 99999997654 8999999999999999997 99999875544443333221000 0
Q ss_pred cccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCC
Q 012233 384 WHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAH 420 (468)
Q Consensus 384 ~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~h 420 (468)
..+...++++.+++.+||+.+|.+||++.++++|
T Consensus 296 ---~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~ 329 (337)
T cd05054 296 ---RAPEYATPEIYSIMLDCWHNNPEDRPTFSELVEI 329 (337)
T ss_pred ---CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 0123467899999999999999999999999874
No 275
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=6e-39 Score=311.47 Aligned_cols=257 Identities=28% Similarity=0.463 Sum_probs=200.0
Q ss_pred ceEEeceecccCceEEEEEEEc---CCCCEEEEEEeeccc--------chHHHHHHHHHHc-CCCCcccccceeeecCCC
Q 012233 138 SYMAERVVGTGSFGVVFQAKCL---ETGDSVAIKKVLQDK--------RYKNRELQIMRLL-NHPNVVSLKHCFFSTTEK 205 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~---~~g~~vaiK~~~~~~--------~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~ 205 (468)
+|++.+.||.|+||.||+|.+. .+|..||+|++.... ....+|+.+++.+ +|+||++++++| .
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~-----~ 75 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAF-----Q 75 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEe-----e
Confidence 3889999999999999999874 478999999885421 2345699999999 599999999888 4
Q ss_pred CceEEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeec
Q 012233 206 DELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFG 285 (468)
Q Consensus 206 ~~~~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG 285 (468)
....+|+||||+.++.+... ......+++..+..++.||+.||.|||+ .|++||||||+|||++.++ .+||+|||
T Consensus 76 ~~~~~~lv~e~~~~~~L~~~---l~~~~~l~~~~~~~~~~qi~~al~~lH~-~~i~H~dl~p~nil~~~~~-~~kl~dfg 150 (290)
T cd05613 76 TDTKLHLILDYINGGELFTH---LSQRERFKEQEVQIYSGEIVLALEHLHK-LGIIYRDIKLENILLDSNG-HVVLTDFG 150 (290)
T ss_pred cCCeEEEEEecCCCCcHHHH---HHHcCCCCHHHHHHHHHHHHHHHHHHHh-CCeeccCCCHHHeEECCCC-CEEEeeCc
Confidence 45568899999997644322 1224568889999999999999999998 8999999999999999887 79999999
Q ss_pred CccccCCCC--CCccccccCCccccccccCC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHH
Q 012233 286 SAKMLVPGE--PNISYICSRYYRAPELIFGA-TEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTRE 362 (468)
Q Consensus 286 ~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~-~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~ 362 (468)
++....... ......|+..|+|||.+.+. ..++.++|||||||++|+|++|..||...........+.......
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~--- 227 (290)
T cd05613 151 LSKEFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKS--- 227 (290)
T ss_pred cceecccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhcc---
Confidence 987654322 22345688999999998643 236789999999999999999999997543322222222211000
Q ss_pred HHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCC-----CHHHHhCCCCCCCCCCC
Q 012233 363 EIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRC-----TALEACAHPFFDDLRDP 429 (468)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~-----s~~ell~hp~f~~~~~~ 429 (468)
. ..++..+++.+.+|+.+||+.||.+|+ ++.+++.||||+.+..+
T Consensus 228 ----------~------------~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~~ 277 (290)
T cd05613 228 ----------E------------PPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKINWD 277 (290)
T ss_pred ----------C------------CCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccCCHH
Confidence 0 012345788999999999999999997 89999999999987643
No 276
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=7.5e-39 Score=305.00 Aligned_cols=243 Identities=21% Similarity=0.296 Sum_probs=191.8
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc---chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEEEe
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK---RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVL 214 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~---~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv~ 214 (468)
.|.+.+.||+|+||.||++.+. .+..+|+|.+.... ....+|+.+++.++||||+++++++ .....+++||
T Consensus 5 ~~~~~~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~iv~ 78 (256)
T cd05114 5 ELTFMKELGSGQFGVVHLGKWR-AQIKVAIKAINEGAMSEEDFIEEAKVMMKLSHPKLVQLYGVC-----TQQKPLYIVT 78 (256)
T ss_pred HcEEeeEecCCcCceEEEEEec-cCceEEEEecccCCccHHHHHHHHHHHHHCCCCCceeEEEEE-----ccCCCEEEEE
Confidence 5889999999999999999875 45689999875432 3456799999999999999999987 3444589999
Q ss_pred ecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCCCC
Q 012233 215 EYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGE 294 (468)
Q Consensus 215 e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~~~ 294 (468)
||++++.+..... .....+++..+..++.|++.||.|||+ +||+|+||||+||+++.++ .+||+|||.++......
T Consensus 79 e~~~~~~L~~~~~--~~~~~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dl~p~ni~i~~~~-~~kl~d~g~~~~~~~~~ 154 (256)
T cd05114 79 EFMENGCLLNYLR--QRQGKLSKDMLLSMCQDVCEGMEYLER-NSFIHRDLAARNCLVSSTG-VVKVSDFGMTRYVLDDE 154 (256)
T ss_pred EcCCCCcHHHHHH--hCccCCCHHHHHHHHHHHHHHHHHHHH-CCccccccCcceEEEcCCC-eEEECCCCCccccCCCc
Confidence 9998664432221 122458889999999999999999998 8999999999999999887 79999999987653322
Q ss_pred CC--ccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCC
Q 012233 295 PN--ISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNY 371 (468)
Q Consensus 295 ~~--~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 371 (468)
.. ....++..|+|||++.+. .++.++|+|||||++|+|++ |+.||...+..+.+..+.+...
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~-------------- 219 (256)
T cd05114 155 YTSSSGAKFPVKWSPPEVFNFS-KYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFR-------------- 219 (256)
T ss_pred eeccCCCCCchhhCChhhcccC-ccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCC--------------
Confidence 21 123445689999998654 48999999999999999999 9999988776665555433100
Q ss_pred ccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 372 TEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
.. .+...+..+.+||.+||+.||.+||++.++++
T Consensus 220 --~~------------~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~ 253 (256)
T cd05114 220 --LY------------RPKLASMTVYEVMYSCWHEKPEGRPTFAELLR 253 (256)
T ss_pred --CC------------CCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 00 12235778999999999999999999999975
No 277
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=7.2e-39 Score=306.83 Aligned_cols=249 Identities=28% Similarity=0.452 Sum_probs=195.7
Q ss_pred cceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc-------chHHHHHHHHHHcCCCCcccccceeeecCCCCceE
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELY 209 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~ 209 (468)
.+|.+.+.||+|+||.||+|.+..+++.||||.+.... ....+|+.+++.++||||+++++++.. ...
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~ 76 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIE-----DNE 76 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEE-----CCe
Confidence 35999999999999999999999999999999774311 234569999999999999999998843 345
Q ss_pred EEEEeecccchHH-HHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCcc
Q 012233 210 LNLVLEYISETVY-RVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAK 288 (468)
Q Consensus 210 ~~lv~e~~~~~ll-~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~ 288 (468)
.++||||++++.+ .++.........+++..+..++.||+.||.|||+ +||+|+||||+|||++.++ .++|+|||++.
T Consensus 77 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~-~~i~H~dl~~~nil~~~~~-~~~l~d~g~~~ 154 (267)
T cd08228 77 LNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHS-RRVMHRDIKPANVFITATG-VVKLGDLGLGR 154 (267)
T ss_pred EEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhh-CCeeCCCCCHHHEEEcCCC-CEEECccccce
Confidence 8899999997544 4444433344568889999999999999999998 8999999999999999887 79999999987
Q ss_pred ccCCCCC-CccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCc-HHHHHHHHHHhCCCCHHHHhh
Q 012233 289 MLVPGEP-NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESG-VDQLVEIIKILGTPTREEIKC 366 (468)
Q Consensus 289 ~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~ 366 (468)
....... .....+++.|+|||.+.+.. ++.++|+|||||++|+|++|+.||..... ...+...+.....++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~-~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~------ 227 (267)
T cd08228 155 FFSSKTTAAHSLVGTPYYMSPERIHENG-YNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPP------ 227 (267)
T ss_pred eccchhHHHhcCCCCccccChhhhccCC-CCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCCCCC------
Confidence 6543221 22356788999999987654 88999999999999999999999965432 222222222111110
Q ss_pred cCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 367 MNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
.....++..+.+||.+||..+|++||++.++++
T Consensus 228 --------------------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~ 260 (267)
T cd08228 228 --------------------LPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQ 260 (267)
T ss_pred --------------------CChhhcCHHHHHHHHHHCCCCcccCcCHHHHHH
Confidence 011246788999999999999999999999987
No 278
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=5.1e-39 Score=309.61 Aligned_cols=245 Identities=34% Similarity=0.613 Sum_probs=200.6
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeecc-------cchHHHHHHHHHHcC-CCCcccccceeeecCCCCceE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD-------KRYKNRELQIMRLLN-HPNVVSLKHCFFSTTEKDELY 209 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~-------~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~~~~ 209 (468)
+|.+.+.||+|+||.||+|.+..+|+.||+|++... .....+|+.+++.+. ||||+++++++ .+...
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~-----~~~~~ 76 (280)
T cd05581 2 DFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTF-----QDEEN 76 (280)
T ss_pred CceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHh-----cCCce
Confidence 599999999999999999999999999999988542 123457889999998 99999999988 44556
Q ss_pred EEEEeecccch-HHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCcc
Q 012233 210 LNLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAK 288 (468)
Q Consensus 210 ~~lv~e~~~~~-ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~ 288 (468)
.++||||+.++ +.+.+.. ...+++..++.++.|++.||.|||+ .|++|+||||+||+++.++ .++|+|||++.
T Consensus 77 ~~lv~e~~~~~~L~~~l~~----~~~l~~~~~~~i~~ql~~~l~~Lh~-~~~~H~dl~~~ni~i~~~~-~~~l~df~~~~ 150 (280)
T cd05581 77 LYFVLEYAPNGELLQYIRK----YGSLDEKCTRFYAAEILLALEYLHS-KGIIHRDLKPENILLDKDM-HIKITDFGTAK 150 (280)
T ss_pred EEEEEcCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHH-CCeeecCCCHHHeEECCCC-CEEecCCcccc
Confidence 89999999654 4443332 3468999999999999999999998 8999999999999999888 79999999987
Q ss_pred ccCCCC---------------------CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHH
Q 012233 289 MLVPGE---------------------PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVD 347 (468)
Q Consensus 289 ~~~~~~---------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~ 347 (468)
...... ......++..|+|||++.+. .++.++|+|||||++|++++|+.||...+...
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~ 229 (280)
T cd05581 151 VLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEK-PAGKSSDLWALGCIIYQMLTGKPPFRGSNEYL 229 (280)
T ss_pred ccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCC-CCChhhhHHHHHHHHHHHHhCCCCCCCccHHH
Confidence 653322 11234578899999998654 48899999999999999999999998876544
Q ss_pred HHHHHHHHhCCCCHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCH----HHHhCCCCC
Q 012233 348 QLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTA----LEACAHPFF 423 (468)
Q Consensus 348 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~----~ell~hp~f 423 (468)
.+..+... ... ++..+++.+.+||.+||+.||.+||++ .++++||||
T Consensus 230 ~~~~~~~~-----------------~~~------------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~ 280 (280)
T cd05581 230 TFQKILKL-----------------EYS------------FPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF 280 (280)
T ss_pred HHHHHHhc-----------------CCC------------CCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence 44443321 111 234568899999999999999999999 999999998
No 279
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=6.6e-39 Score=309.11 Aligned_cols=249 Identities=22% Similarity=0.285 Sum_probs=190.9
Q ss_pred ccceEEeceecccCceEEEEEEEc-----CCCCEEEEEEeeccc-----chHHHHHHHHHHcCCCCcccccceeeecCCC
Q 012233 136 TISYMAERVVGTGSFGVVFQAKCL-----ETGDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEK 205 (468)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~~-----~~g~~vaiK~~~~~~-----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 205 (468)
..+|.+.+.||+|+||.||+|.+. .++..||+|.+.... ..+.+|+.+++.++||||+++++++ .
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~-----~ 79 (277)
T cd05062 5 REKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV-----S 79 (277)
T ss_pred HHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEE-----c
Confidence 346999999999999999999864 245679999875432 1245789999999999999999987 3
Q ss_pred CceEEEEEeecccchHHH-HHhhhhh------cCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCc
Q 012233 206 DELYLNLVLEYISETVYR-VSKHYTR------MNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQ 278 (468)
Q Consensus 206 ~~~~~~lv~e~~~~~ll~-~~~~~~~------~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~ 278 (468)
.....++||||++++.+. .+..... ....+++..+..++.|++.||.|||+ .|++|+||||+|||++.++ .
T Consensus 80 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~-~~~vH~dlkp~Nil~~~~~-~ 157 (277)
T cd05062 80 QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNA-NKFVHRDLAARNCMVAEDF-T 157 (277)
T ss_pred CCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHH-CCcccCCcchheEEEcCCC-C
Confidence 444588999999875444 3322111 12235677888999999999999998 8999999999999999887 7
Q ss_pred EEEeeecCccccCCCCC---CccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHH
Q 012233 279 LKICDFGSAKMLVPGEP---NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIK 354 (468)
Q Consensus 279 vkL~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~ 354 (468)
++|+|||+++....... .....+++.|+|||.+.+.. ++.++|||||||++|||++ |..||.+.+..+.+..+..
T Consensus 158 ~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~~ 236 (277)
T cd05062 158 VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGV-FTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVME 236 (277)
T ss_pred EEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCC-cCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc
Confidence 99999999875533221 11234577899999986544 8999999999999999998 7899987765544443322
Q ss_pred HhCCCCHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCC
Q 012233 355 ILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAH 420 (468)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~h 420 (468)
.. ++ .++..+++.+.++|.+||+.||.+|||+.+++.+
T Consensus 237 ~~-------------------~~---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 274 (277)
T cd05062 237 GG-------------------LL---------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 274 (277)
T ss_pred CC-------------------cC---------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 10 00 0223478899999999999999999999999863
No 280
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=5.9e-39 Score=308.14 Aligned_cols=250 Identities=20% Similarity=0.294 Sum_probs=192.8
Q ss_pred eEEeceecccCceEEEEEEEcCC---CCEEEEEEeeccc------chHHHHHHHHHHcCCCCcccccceeeecCC-CCce
Q 012233 139 YMAERVVGTGSFGVVFQAKCLET---GDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTE-KDEL 208 (468)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~~~~~---g~~vaiK~~~~~~------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~-~~~~ 208 (468)
|.+.+.||+|+||.||.|....+ +..||+|.+..+. ....+|+.+++.++||||+++++++..... .+..
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 56788999999999999987653 4789999886432 234568999999999999999998755443 3344
Q ss_pred EEEEEeecccchHHHHHhhhh---hcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeec
Q 012233 209 YLNLVLEYISETVYRVSKHYT---RMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFG 285 (468)
Q Consensus 209 ~~~lv~e~~~~~ll~~~~~~~---~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG 285 (468)
+.++||||+.++.+....... .....+++..+..++.|++.||.|||+ .||+||||||+||+++.++ .+||+|||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~-~~i~H~dlkp~Nil~~~~~-~~kl~dfg 158 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSN-RNFIHRDLAARNCMLREDM-TVCVADFG 158 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHh-CCeeccccchheEEECCCC-eEEECCcc
Confidence 578999999875544332221 123468899999999999999999998 8999999999999999887 79999999
Q ss_pred CccccCCCCC---CccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCH
Q 012233 286 SAKMLVPGEP---NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTR 361 (468)
Q Consensus 286 ~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~ 361 (468)
+++....... .....++..|+|||.+.+. .++.++|||||||++|||++ |..||.+....+.+..+....
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~~----- 232 (273)
T cd05035 159 LSKKIYSGDYYRQGRIAKMPVKWIAIESLADR-VYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGN----- 232 (273)
T ss_pred ceeeccccccccccccccCCccccCHhhcccC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-----
Confidence 9986643321 1122346789999998654 48999999999999999999 999998776655443332210
Q ss_pred HHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 362 EEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
... .+..++.++.++|.+||+.||.+|||+.+++.
T Consensus 233 -----------~~~------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~ 267 (273)
T cd05035 233 -----------RLK------------QPEDCLDELYDLMYSCWRADPKDRPTFTKLRE 267 (273)
T ss_pred -----------CCC------------CCcCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 000 22357889999999999999999999999976
No 281
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=3.2e-39 Score=315.67 Aligned_cols=250 Identities=22% Similarity=0.310 Sum_probs=190.7
Q ss_pred cccceEEeceecccCceEEEEEEEcCCCCE--EEEEEeeccc-----chHHHHHHHHHHc-CCCCcccccceeeecCCCC
Q 012233 135 QTISYMAERVVGTGSFGVVFQAKCLETGDS--VAIKKVLQDK-----RYKNRELQIMRLL-NHPNVVSLKHCFFSTTEKD 206 (468)
Q Consensus 135 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~--vaiK~~~~~~-----~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~ 206 (468)
...+|.+.+.||+|+||.||+|.+..++.. +|+|.+.... ..+.+|+.++.++ +|+||+++++++ ..
T Consensus 5 ~~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~-----~~ 79 (303)
T cd05088 5 EWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGAC-----EH 79 (303)
T ss_pred chhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEE-----CC
Confidence 345799999999999999999998877765 5777664321 2345699999999 899999999988 44
Q ss_pred ceEEEEEeecccch-HHHHHhhhh------------hcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeec
Q 012233 207 ELYLNLVLEYISET-VYRVSKHYT------------RMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVN 273 (468)
Q Consensus 207 ~~~~~lv~e~~~~~-ll~~~~~~~------------~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~ 273 (468)
..+.|+||||++++ +...+.... .....+++..++.++.||+.||+|||+ +||+||||||+|||++
T Consensus 80 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~-~gi~H~dlkp~Nili~ 158 (303)
T cd05088 80 RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ-KQFIHRDLAARNILVG 158 (303)
T ss_pred CCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHh-CCccccccchheEEec
Confidence 45689999999865 444333221 112357889999999999999999998 8999999999999999
Q ss_pred CCCCcEEEeeecCccccCCCCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHH
Q 012233 274 PHTHQLKICDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEI 352 (468)
Q Consensus 274 ~~~~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~~~i 352 (468)
.++ .+||+|||++.............++..|+|||.+.+.. ++.++|||||||++|||++ |..||.+.+..+....+
T Consensus 159 ~~~-~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~ 236 (303)
T cd05088 159 ENY-VAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSV-YTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKL 236 (303)
T ss_pred CCC-cEEeCccccCcccchhhhcccCCCcccccCHHHHhccC-CcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHH
Confidence 887 79999999986432211222233466799999886544 8899999999999999998 99999876654433322
Q ss_pred HHHhCCCCHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCC
Q 012233 353 IKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAH 420 (468)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~h 420 (468)
... ... ..+..+++++.+||.+||+.+|.+||++.+++.+
T Consensus 237 ~~~------------------~~~----------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 276 (303)
T cd05088 237 PQG------------------YRL----------EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 276 (303)
T ss_pred hcC------------------CcC----------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 110 000 0123467899999999999999999999999875
No 282
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=1.5e-38 Score=300.61 Aligned_cols=249 Identities=29% Similarity=0.471 Sum_probs=201.3
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc----chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLV 213 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv 213 (468)
.|.+.+.||+|++|.||++.+..+++.+++|++.... ....+|+.+++.++|+||+++++++.. ....+++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~~l~ 75 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLK-----KDELWIV 75 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEec-----CCeEEEE
Confidence 3888899999999999999998899999999886543 345679999999999999999998833 3458899
Q ss_pred eecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCCC
Q 012233 214 LEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPG 293 (468)
Q Consensus 214 ~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~~ 293 (468)
+||++++.+..... .....+++..+..++.|++.||.|||+ .|++|+||+|+||+++.++ .++|+|||.+......
T Consensus 76 ~e~~~~~~L~~~~~--~~~~~~~~~~~~~i~~~i~~~l~~lh~-~~i~h~dl~p~ni~i~~~~-~~~l~d~~~~~~~~~~ 151 (253)
T cd05122 76 MEFCSGGSLKDLLK--STNQTLTESQIAYVCKELLKGLEYLHS-NGIIHRDIKAANILLTSDG-EVKLIDFGLSAQLSDT 151 (253)
T ss_pred EecCCCCcHHHHHh--hcCCCCCHHHHHHHHHHHHHHHHHhhc-CCEecCCCCHHHEEEccCC-eEEEeecccccccccc
Confidence 99999655443222 122568999999999999999999998 8999999999999999887 7999999999876554
Q ss_pred CCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCCcc
Q 012233 294 EPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTE 373 (468)
Q Consensus 294 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 373 (468)
.......++..|+|||.+.+.. ++.++|+||||+++|+|++|+.||...+....+..+... ..+ .
T Consensus 152 ~~~~~~~~~~~~~~PE~~~~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-~~~-------------~ 216 (253)
T cd05122 152 KARNTMVGTPYWMAPEVINGKP-YDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATN-GPP-------------G 216 (253)
T ss_pred ccccceecCCcccCHHHHcCCC-CCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhc-CCC-------------C
Confidence 3344567889999999987654 889999999999999999999999877544444333220 000 0
Q ss_pred CCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCC
Q 012233 374 FKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPF 422 (468)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~ 422 (468)
++ ....++..+.++|.+||+.||.+|||+.+++.|||
T Consensus 217 --~~----------~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~~~ 253 (253)
T cd05122 217 --LR----------NPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKHPF 253 (253)
T ss_pred --cC----------cccccCHHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence 00 01124788999999999999999999999999999
No 283
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=6.3e-39 Score=304.69 Aligned_cols=239 Identities=22% Similarity=0.301 Sum_probs=185.6
Q ss_pred ceecccCceEEEEEEEcCCCCEEEEEEeeccc-----chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEEEeecc
Q 012233 143 RVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVLEYI 217 (468)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv~e~~ 217 (468)
+.||+|+||.||+|.+..+++.||+|.+.... ..+.+|+++++.++||||+++++++ ......++||||+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~lv~e~~ 75 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC-----TQKQPIYIVMELV 75 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEE-----cCCCCeEEEEeec
Confidence 36999999999999999999999999875432 2356799999999999999999988 3444588999999
Q ss_pred cchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCCCCCCc
Q 012233 218 SETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGEPNI 297 (468)
Q Consensus 218 ~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~~~~~~ 297 (468)
.++.+.... ......+++..++.++.|++.||.|||+ +||+|+||||+|||++.++ .+||+|||++..........
T Consensus 76 ~~~~L~~~~--~~~~~~~~~~~~~~~~~qi~~~L~~lH~-~~i~H~dl~p~nil~~~~~-~~kl~dfg~~~~~~~~~~~~ 151 (252)
T cd05084 76 QGGDFLTFL--RTEGPRLKVKELIQMVENAAAGMEYLES-KHCIHRDLAARNCLVTEKN-VLKISDFGMSREEEDGVYAS 151 (252)
T ss_pred cCCcHHHHH--HhCCCCCCHHHHHHHHHHHHHHHHHHHh-CCccccccchheEEEcCCC-cEEECccccCcccccccccc
Confidence 876444222 1223458899999999999999999998 8999999999999999887 79999999987543221111
Q ss_pred ---cccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCCcc
Q 012233 298 ---SYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTE 373 (468)
Q Consensus 298 ---~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 373 (468)
...++..|+|||.+.+.. ++.++|||||||++|+|++ |..||...........+.... .
T Consensus 152 ~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~----------------~ 214 (252)
T cd05084 152 TGGMKQIPVKWTAPEALNYGR-YSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGV----------------R 214 (252)
T ss_pred cCCCCCCceeecCchhhcCCC-CChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcCC----------------C
Confidence 112245699999986554 8999999999999999997 999997665544333222100 0
Q ss_pred CCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 374 FKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
. .++..++..+.+||.+||+.||.+|||+.+++.
T Consensus 215 ~------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 248 (252)
T cd05084 215 L------------PCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQ 248 (252)
T ss_pred C------------CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 0 122346889999999999999999999999864
No 284
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=6.9e-39 Score=309.97 Aligned_cols=249 Identities=20% Similarity=0.299 Sum_probs=192.0
Q ss_pred ccceEEeceecccCceEEEEEEEc----CCCCEEEEEEeeccc-----chHHHHHHHHHHcCCCCcccccceeeecCCCC
Q 012233 136 TISYMAERVVGTGSFGVVFQAKCL----ETGDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKD 206 (468)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~~----~~g~~vaiK~~~~~~-----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 206 (468)
...|++.+.||+|+||.||+|.+. .++..||+|.+.... ..+.+|+.+++.++||||+++++++. .
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-----~ 78 (283)
T cd05090 4 LSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVT-----Q 78 (283)
T ss_pred hhhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEe-----c
Confidence 346899999999999999999853 456789999886422 23457999999999999999999873 3
Q ss_pred ceEEEEEeecccchHHHHHhhhh--------------hcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeee
Q 012233 207 ELYLNLVLEYISETVYRVSKHYT--------------RMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLV 272 (468)
Q Consensus 207 ~~~~~lv~e~~~~~ll~~~~~~~--------------~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl 272 (468)
....|+||||+.++.+....... .....+++..+..++.|++.||.|||+ +||+||||||+|||+
T Consensus 79 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~-~~i~H~dlkp~nili 157 (283)
T cd05090 79 EQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSS-HFFVHKDLAARNILI 157 (283)
T ss_pred CCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHh-cCeehhccccceEEE
Confidence 34588999999865443222111 112347788889999999999999998 899999999999999
Q ss_pred cCCCCcEEEeeecCccccCCCC---CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHH
Q 012233 273 NPHTHQLKICDFGSAKMLVPGE---PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQ 348 (468)
Q Consensus 273 ~~~~~~vkL~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~ 348 (468)
+.++ .+||+|||+++...... ......++..|+|||.+.+.. ++.++|||||||++|||++ |..||.+.+..+.
T Consensus 158 ~~~~-~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~ 235 (283)
T cd05090 158 GEQL-HVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGK-FSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEV 235 (283)
T ss_pred cCCC-cEEeccccccccccCCcceecccCCCccceecChHHhccCC-CCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHH
Confidence 9887 79999999997653322 122344567899999986544 8999999999999999998 9999987665433
Q ss_pred HHHHHHHhCCCCHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCC
Q 012233 349 LVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAH 420 (468)
Q Consensus 349 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~h 420 (468)
...+... .. . ..+..+++.+.++|.+||+.||.+||++.+++++
T Consensus 236 ~~~~~~~-~~-----------------~----------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~ 279 (283)
T cd05090 236 IEMVRKR-QL-----------------L----------PCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTR 279 (283)
T ss_pred HHHHHcC-Cc-----------------C----------CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 3332210 00 0 0234578899999999999999999999998764
No 285
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=1.1e-38 Score=314.01 Aligned_cols=247 Identities=28% Similarity=0.434 Sum_probs=201.6
Q ss_pred eEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc-------chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEE
Q 012233 139 YMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (468)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~ 211 (468)
|...+.||+|+||.||++.+..++..||+|.+.... ....+|+.+++.++|||++++++++. +....+
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~~~~~~ 101 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYL-----REHTAW 101 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEe-----eCCeEE
Confidence 888899999999999999999999999999885331 13456899999999999999999884 334588
Q ss_pred EEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccC
Q 012233 212 LVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (468)
Q Consensus 212 lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~ 291 (468)
+||||+.+++++.+.. ....+++..+..++.||+.||.|||+ .||+|+||+|+||+++.++ .++|+|||++....
T Consensus 102 lv~e~~~g~l~~~~~~---~~~~l~~~~~~~i~~~i~~~l~~lH~-~~i~H~dL~p~Nil~~~~~-~~kl~dfg~~~~~~ 176 (317)
T cd06635 102 LVMEYCLGSASDLLEV---HKKPLQEVEIAAITHGALQGLAYLHS-HNMIHRDIKAGNILLTEPG-QVKLADFGSASIAS 176 (317)
T ss_pred EEEeCCCCCHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCcccEEECCCC-CEEEecCCCccccC
Confidence 9999999887765432 24558899999999999999999998 8999999999999999887 79999999986543
Q ss_pred CCCCCccccccCCccccccccC--CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCC
Q 012233 292 PGEPNISYICSRYYRAPELIFG--ATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP 369 (468)
Q Consensus 292 ~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 369 (468)
. .....+++.|+|||.+.. ...++.++|||||||++|+|++|..||........+..+......+
T Consensus 177 ~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~---------- 243 (317)
T cd06635 177 P---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPT---------- 243 (317)
T ss_pred C---cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccCCC----------
Confidence 2 234578899999999742 2347889999999999999999999998776555555544321100
Q ss_pred CCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCC
Q 012233 370 NYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDD 425 (468)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~ 425 (468)
.....+++.+++||.+||+.+|.+||++.+++.|+|+..
T Consensus 244 -----------------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~ 282 (317)
T cd06635 244 -----------------LQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLR 282 (317)
T ss_pred -----------------CCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhc
Confidence 011236788999999999999999999999999999965
No 286
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=5.4e-39 Score=309.88 Aligned_cols=247 Identities=22% Similarity=0.310 Sum_probs=194.1
Q ss_pred cceEEeceecccCceEEEEEEEcC-----CCCEEEEEEeeccc-----chHHHHHHHHHHcCCCCcccccceeeecCCCC
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLE-----TGDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKD 206 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~-----~g~~vaiK~~~~~~-----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 206 (468)
.+|.+.+.||+|+||.||+|.+.. ++..||+|.+.... ..+.+|+++++.++|+||+++++++..
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~----- 79 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTE----- 79 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEec-----
Confidence 458999999999999999998743 46789999886432 345579999999999999999998843
Q ss_pred ceEEEEEeecccchHHHH-Hhhh----------hhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCC
Q 012233 207 ELYLNLVLEYISETVYRV-SKHY----------TRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPH 275 (468)
Q Consensus 207 ~~~~~lv~e~~~~~ll~~-~~~~----------~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~ 275 (468)
....++||||+.++.+.. +... ......+++..+..++.||+.||.|||+ +||+||||||+|||++.+
T Consensus 80 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~-~~i~h~dlkp~nili~~~ 158 (280)
T cd05049 80 GDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLAS-QHFVHRDLATRNCLVGYD 158 (280)
T ss_pred CCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhh-CCeeccccccceEEEcCC
Confidence 345899999998765443 2221 1123457888899999999999999998 899999999999999988
Q ss_pred CCcEEEeeecCccccCCCC---CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHH
Q 012233 276 THQLKICDFGSAKMLVPGE---PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVE 351 (468)
Q Consensus 276 ~~~vkL~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~~~ 351 (468)
+ .+||+|||++....... ......+++.|+|||++.+.. ++.++|||||||++|||++ |..||...+..+....
T Consensus 159 ~-~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~ 236 (280)
T cd05049 159 L-VVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRK-FTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIEC 236 (280)
T ss_pred C-eEEECCcccceecccCcceecCCCCcccceecChhhhccCC-cchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Confidence 7 79999999987543222 122334578899999997654 8999999999999999998 9999987766554444
Q ss_pred HHHHhCCCCHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 352 IIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 352 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
+.... . ...+..++..+.+||.+||+.||.+||++.|++.
T Consensus 237 ~~~~~-------------------~---------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 276 (280)
T cd05049 237 ITQGR-------------------L---------LQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHE 276 (280)
T ss_pred HHcCC-------------------c---------CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 33210 0 0022347889999999999999999999999975
No 287
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=5.3e-39 Score=316.02 Aligned_cols=244 Identities=23% Similarity=0.361 Sum_probs=189.9
Q ss_pred cceEEeceecccCceEEEEEEEcCCCCE----EEEEEeeccc-----chHHHHHHHHHHcCCCCcccccceeeecCCCCc
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLETGDS----VAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDE 207 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~----vaiK~~~~~~-----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 207 (468)
.+|++.+.||+|+||.||+|.+..+|.. ||+|.+.... ..+.+|+.+++.++||||+++++++...
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~----- 81 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS----- 81 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-----
Confidence 3599999999999999999998766664 8999875332 2345689999999999999999987432
Q ss_pred eEEEEEeecccch-HHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecC
Q 012233 208 LYLNLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGS 286 (468)
Q Consensus 208 ~~~~lv~e~~~~~-ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~ 286 (468)
..++|+||+.++ +++.+. .....++...+..++.||+.||+|||+ +||+||||||+|||++.++ .+||+|||+
T Consensus 82 -~~~~v~e~~~~g~l~~~l~---~~~~~~~~~~~~~~~~qi~~~L~~LH~-~~iiH~dlkp~Nill~~~~-~~kl~DfG~ 155 (316)
T cd05108 82 -TVQLITQLMPFGCLLDYVR---EHKDNIGSQYLLNWCVQIAKGMNYLEE-RRLVHRDLAARNVLVKTPQ-HVKITDFGL 155 (316)
T ss_pred -CceeeeecCCCCCHHHHHH---hccccCCHHHHHHHHHHHHHHHHHHHh-cCeeccccchhheEecCCC-cEEEccccc
Confidence 256899999865 444332 223457888899999999999999998 8999999999999999887 799999999
Q ss_pred ccccCCCCCCc---cccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHH
Q 012233 287 AKMLVPGEPNI---SYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTRE 362 (468)
Q Consensus 287 a~~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~ 362 (468)
++......... ...++..|+|||.+.+. .++.++|||||||++|||++ |..||.+....+ +..++...
T Consensus 156 a~~~~~~~~~~~~~~~~~~~~y~apE~~~~~-~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~-~~~~~~~~------ 227 (316)
T cd05108 156 AKLLGADEKEYHAEGGKVPIKWMALESILHR-IYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE-ISSILEKG------ 227 (316)
T ss_pred cccccCCCcceeccCCccceeecChHHhccC-CCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHH-HHHHHhCC------
Confidence 98765433222 22346689999998654 48999999999999999997 999998765443 33333210
Q ss_pred HHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCC
Q 012233 363 EIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAH 420 (468)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~h 420 (468)
..++ .+..++.++.++|.+||..||.+||++.+++.+
T Consensus 228 -----------~~~~----------~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~ 264 (316)
T cd05108 228 -----------ERLP----------QPPICTIDVYMIMVKCWMIDADSRPKFRELIIE 264 (316)
T ss_pred -----------CCCC----------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 0111 123467889999999999999999999999885
No 288
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=8e-39 Score=307.35 Aligned_cols=251 Identities=20% Similarity=0.262 Sum_probs=189.9
Q ss_pred eEEeceecccCceEEEEEEEcCCCC--EEEEEEeecc------cchHHHHHHHHHHcCCCCcccccceeeecCC-CCceE
Q 012233 139 YMAERVVGTGSFGVVFQAKCLETGD--SVAIKKVLQD------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTE-KDELY 209 (468)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~~~~~g~--~vaiK~~~~~------~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~-~~~~~ 209 (468)
|.+++.||+|+||.||+|.+..++. .||+|.+... ...+.+|+.+++.++|+||+++++.++.... .....
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 3467889999999999999877765 5899987532 2234568999999999999999987644322 12234
Q ss_pred EEEEeecccchHHH-HHhhh--hhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecC
Q 012233 210 LNLVLEYISETVYR-VSKHY--TRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGS 286 (468)
Q Consensus 210 ~~lv~e~~~~~ll~-~~~~~--~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~ 286 (468)
.++||||+.++.+. .+... ......+++..+..++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||+
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dlkp~Nil~~~~~-~~kl~Dfg~ 158 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSS-KSFIHRDLAARNCMLNENM-NVCVADFGL 158 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHH-CCeeccccchhheEEcCCC-CEEECCCCc
Confidence 67999999865443 22211 1123457899999999999999999998 8999999999999999887 799999999
Q ss_pred ccccCCCCC---CccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHH
Q 012233 287 AKMLVPGEP---NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTRE 362 (468)
Q Consensus 287 a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~ 362 (468)
++....... .....+++.|+|||.+.+. .++.++|||||||++|||++ |+.||.+....+....+... .
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~-~----- 231 (272)
T cd05075 159 SKKIYNGDYYRQGRIAKMPVKWIAIESLADR-VYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQG-N----- 231 (272)
T ss_pred ccccCcccceecCCcccCCcccCCHHHccCC-CcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC-C-----
Confidence 986643321 1223456789999998654 48999999999999999999 89999876654433332220 0
Q ss_pred HHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCC
Q 012233 363 EIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAH 420 (468)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~h 420 (468)
.. .++..++..+.++|.+||+.||.+|||+.+++.+
T Consensus 232 ------------~~----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 267 (272)
T cd05075 232 ------------RL----------KQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCE 267 (272)
T ss_pred ------------CC----------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 00 0223477889999999999999999999999763
No 289
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=1.9e-38 Score=300.98 Aligned_cols=247 Identities=34% Similarity=0.548 Sum_probs=202.2
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeecccc------hHHHHHHHHHHcCCCCcccccceeeecCCCCceEEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKR------YKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~~------~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~ 211 (468)
+|.+.+.||+|++|.||++.+..+++.|++|.+..... ...+|+++++.++|+|++++++++. +....+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~ 75 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIE-----TSDSLY 75 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEE-----eCCEEE
Confidence 48889999999999999999998999999998855432 3457999999999999999999873 345688
Q ss_pred EEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccC
Q 012233 212 LVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (468)
Q Consensus 212 lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~ 291 (468)
+||||+.++.+.... .....+++..++.++.|++.||.|||+ .||+|+||||+||+++.++ .++|+|||.+....
T Consensus 76 ~v~e~~~~~~L~~~~---~~~~~l~~~~~~~~~~~i~~~l~~lH~-~~i~H~dl~p~ni~i~~~~-~~~l~d~~~~~~~~ 150 (254)
T cd06627 76 IILEYAENGSLRQII---KKFGPFPESLVAVYVYQVLQGLAYLHE-QGVIHRDIKAANILTTKDG-VVKLADFGVATKLN 150 (254)
T ss_pred EEEecCCCCcHHHHH---HhccCCCHHHHHHHHHHHHHHHHHHhh-CCcccCCCCHHHEEECCCC-CEEEeccccceecC
Confidence 999999876444222 123568999999999999999999998 8999999999999999877 79999999998764
Q ss_pred CCCC-CccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCC
Q 012233 292 PGEP-NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPN 370 (468)
Q Consensus 292 ~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 370 (468)
.... .....++..|+|||.+.+.. ++.++|+||||+++|+|++|..||...+......++...
T Consensus 151 ~~~~~~~~~~~~~~y~~pe~~~~~~-~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~--------------- 214 (254)
T cd06627 151 DVSKDDASVVGTPYWMAPEVIEMSG-ASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQD--------------- 214 (254)
T ss_pred CCcccccccccchhhcCHhhhcCCC-CCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcc---------------
Confidence 4332 23456788999999986654 889999999999999999999999876654444333210
Q ss_pred CccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCC
Q 012233 371 YTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (468)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f 423 (468)
. ...++..++..+.++|.+||..+|++|||+.+++.||||
T Consensus 215 ----~---------~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~~ 254 (254)
T cd06627 215 ----D---------HPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLKHPWI 254 (254)
T ss_pred ----C---------CCCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhcCCCC
Confidence 0 011334578999999999999999999999999999998
No 290
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=100.00 E-value=1.3e-38 Score=333.78 Aligned_cols=286 Identities=22% Similarity=0.272 Sum_probs=185.4
Q ss_pred CcccceEEeceecccCceEEEEEEEcCC----CCEEEEEEeecccchHHHHHHHH---HHcCCCCcccccceeeecCC-C
Q 012233 134 KQTISYMAERVVGTGSFGVVFQAKCLET----GDSVAIKKVLQDKRYKNRELQIM---RLLNHPNVVSLKHCFFSTTE-K 205 (468)
Q Consensus 134 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~----g~~vaiK~~~~~~~~~~~E~~il---~~l~hpnIv~l~~~~~~~~~-~ 205 (468)
...++|.+.+.||+|+||.||+|.+..+ +..||+|++..... .|..+. +...+.+++.++..|..... .
T Consensus 129 ~~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~---~e~~~~e~l~~~~~~~~~~~~~~~~~~~~~~ 205 (566)
T PLN03225 129 FKKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA---VEIWMNERVRRACPNSCADFVYGFLEPVSSK 205 (566)
T ss_pred CccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch---hHHHHHHHHHhhchhhHHHHHHhhhcccccc
Confidence 3456899999999999999999999888 99999998754322 222222 22233444444433322111 3
Q ss_pred CceEEEEEeecccchHHHHHhhhhhc-----------------CCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCC
Q 012233 206 DELYLNLVLEYISETVYRVSKHYTRM-----------------NQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQ 268 (468)
Q Consensus 206 ~~~~~~lv~e~~~~~ll~~~~~~~~~-----------------~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~ 268 (468)
....++|||||++++.+..+...... ........+..++.||+.||.|||+ +||+||||||+
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~-~gIiHRDLKP~ 284 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHS-TGIVHRDVKPQ 284 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHH-CCEEeCcCCHH
Confidence 34458899999987644332211100 0011223466799999999999998 89999999999
Q ss_pred CeeecCCCCcEEEeeecCccccCCCC--CCccccccCCccccccccCCC---------------------CCCcchhHHH
Q 012233 269 NLLVNPHTHQLKICDFGSAKMLVPGE--PNISYICSRYYRAPELIFGAT---------------------EYTTAIDMWS 325 (468)
Q Consensus 269 NILl~~~~~~vkL~DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~---------------------~~~~~~DvwS 325 (468)
|||++.+...+||+|||+++.+.... .....++++.|+|||.+.... .++.++||||
T Consensus 285 NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwS 364 (566)
T PLN03225 285 NIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYS 364 (566)
T ss_pred HEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHH
Confidence 99998654479999999997653322 234568899999999763221 2345679999
Q ss_pred HHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcc
Q 012233 326 IGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQ 405 (468)
Q Consensus 326 lG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~ 405 (468)
|||+||||+++..++ .+....+..++...+...........+.. .+.+.. .. .........+.+||.+||+
T Consensus 365 lGviL~el~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~--~~-~~~d~~~~~~~dLi~~mL~ 435 (566)
T PLN03225 365 AGLIFLQMAFPNLRS--DSNLIQFNRQLKRNDYDLVAWRKLVEPRA----SPDLRR--GF-EVLDLDGGAGWELLKSMMR 435 (566)
T ss_pred HHHHHHHHHhCcCCC--chHHHHHHHHHHhcCCcHHHHHHhhcccc----chhhhh--hh-hhccccchHHHHHHHHHcc
Confidence 999999999876554 34444455554443333222111111110 000000 00 0112234567799999999
Q ss_pred cCCCCCCCHHHHhCCCCCCCCCCCCCC
Q 012233 406 YSPSLRCTALEACAHPFFDDLRDPNTC 432 (468)
Q Consensus 406 ~dP~~R~s~~ell~hp~f~~~~~~~~~ 432 (468)
+||.+|||+.++|+||||+........
T Consensus 436 ~dP~kR~ta~e~L~Hpff~~~~~~~~~ 462 (566)
T PLN03225 436 FKGRQRISAKAALAHPYFDREGLLGLS 462 (566)
T ss_pred CCcccCCCHHHHhCCcCcCCCCccccc
Confidence 999999999999999999886554333
No 291
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=8.7e-39 Score=305.17 Aligned_cols=249 Identities=24% Similarity=0.447 Sum_probs=196.3
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeecc---------cchHHHHHHHHHHcCCCCcccccceeeecCCCCce
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD---------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDEL 208 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~---------~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 208 (468)
+|.+.+.||+|+||.||++.+...+..+++|++... .....+|+.+++.++||||+++++++. +..
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~ 75 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFL-----ERD 75 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHh-----cCC
Confidence 489999999999999999999877777777765321 112346889999999999999999883 334
Q ss_pred EEEEEeecccchHHH-HHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCc
Q 012233 209 YLNLVLEYISETVYR-VSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSA 287 (468)
Q Consensus 209 ~~~lv~e~~~~~ll~-~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a 287 (468)
..++||||+.++.+. .+.........+++..++.++.|++.||.|||+ .|++|+||||+||+++.+ .++|+|||++
T Consensus 76 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~-~~i~h~~l~~~nili~~~--~~~l~d~g~~ 152 (260)
T cd08222 76 AFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQ-RRILHRDLKAKNIFLKNN--LLKIGDFGVS 152 (260)
T ss_pred ceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHH-cCccccCCChhheEeecC--CEeecccCce
Confidence 588999999875444 333333445678999999999999999999998 899999999999999853 5999999998
Q ss_pred cccCCCC-CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhh
Q 012233 288 KMLVPGE-PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKC 366 (468)
Q Consensus 288 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 366 (468)
....... ......+++.|+|||.+.+. .++.++|+||||+++|+|++|..||...........+... +
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~~---~------- 221 (260)
T cd08222 153 RLLMGSCDLATTFTGTPYYMSPEALKHQ-GYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEG---P------- 221 (260)
T ss_pred eecCCCcccccCCCCCcCccCHHHHccC-CCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHcC---C-------
Confidence 7654332 23345678899999998654 4788999999999999999999999766544444333220 0
Q ss_pred cCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCC
Q 012233 367 MNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (468)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f 423 (468)
.+ .++..++.++.++|.+||..||.+||++.+++.||||
T Consensus 222 ---------~~---------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 260 (260)
T cd08222 222 ---------TP---------SLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRNPFI 260 (260)
T ss_pred ---------CC---------CCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhCCCC
Confidence 00 0224578899999999999999999999999999997
No 292
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=2.2e-38 Score=301.11 Aligned_cols=249 Identities=28% Similarity=0.431 Sum_probs=201.7
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc------chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~ 211 (468)
+|.+.+.||.|+||.||++.+..+++.+|+|.+.... ....+|+.+++.++|+||+++++++. +....+
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~ 75 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFL-----DGNKLC 75 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhc-----cCCEEE
Confidence 4889999999999999999999999999999885421 23346889999999999999999884 335689
Q ss_pred EEeecccch-HHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCcccc
Q 012233 212 LVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (468)
Q Consensus 212 lv~e~~~~~-ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~ 290 (468)
+||||+++. +...+.........+++..++.++.|++.||.|||+ .|++|+||+|.||+++.++ .+||+|||++...
T Consensus 76 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~-~~i~h~~l~~~ni~~~~~~-~~kl~d~g~~~~~ 153 (256)
T cd08530 76 IVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHE-QKILHRDLKSANILLVAND-LVKIGDLGISKVL 153 (256)
T ss_pred EEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh-CCcccCCCCcceEEEecCC-cEEEeeccchhhh
Confidence 999999765 444443333334668889999999999999999998 8999999999999999877 7999999999776
Q ss_pred CCCCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCC
Q 012233 291 VPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPN 370 (468)
Q Consensus 291 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 370 (468)
... ......+++.|+|||.+.+. .++.++|+||||+++|+|++|+.||...+..+....+...
T Consensus 154 ~~~-~~~~~~~~~~~~~Pe~~~~~-~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~--------------- 216 (256)
T cd08530 154 KKN-MAKTQIGTPHYMAPEVWKGR-PYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRG--------------- 216 (256)
T ss_pred ccC-CcccccCCccccCHHHHCCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC---------------
Confidence 544 33345688999999999664 4889999999999999999999999877654433332210
Q ss_pred CccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCC
Q 012233 371 YTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (468)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f 423 (468)
.++. ....++.+++++|.+||+.+|.+||++.++++||++
T Consensus 217 ----~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~p~~ 256 (256)
T cd08530 217 ----KYPP---------IPPIYSQDLQNFIRSMLQVKPKLRPNCDKILASPAV 256 (256)
T ss_pred ----CCCC---------CchhhCHHHHHHHHHHcCCCcccCCCHHHHhcCCCC
Confidence 1111 223467889999999999999999999999999985
No 293
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=4.4e-39 Score=311.24 Aligned_cols=247 Identities=21% Similarity=0.255 Sum_probs=192.9
Q ss_pred cceEEeceecccCceEEEEEEEcCC-----CCEEEEEEeeccc-----chHHHHHHHHHHcCCCCcccccceeeecCCCC
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLET-----GDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKD 206 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~-----g~~vaiK~~~~~~-----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 206 (468)
..|++.+.||.|+||.||+|.+..+ +..||||++.... ..+.+|+.++..++||||+++++++ ..
T Consensus 5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~-----~~ 79 (283)
T cd05091 5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVV-----TK 79 (283)
T ss_pred HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEE-----cC
Confidence 3588999999999999999987543 5789999986443 2345789999999999999999988 34
Q ss_pred ceEEEEEeecccchHHHHHhhh-------------hhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeec
Q 012233 207 ELYLNLVLEYISETVYRVSKHY-------------TRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVN 273 (468)
Q Consensus 207 ~~~~~lv~e~~~~~ll~~~~~~-------------~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~ 273 (468)
....++++||+.++.+...... ......+++..+..++.|++.||.|||+ +||+||||||+|||++
T Consensus 80 ~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~-~gi~H~dlkp~Nil~~ 158 (283)
T cd05091 80 EQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSS-HHVVHKDLATRNVLVF 158 (283)
T ss_pred CCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHH-cCccccccchhheEec
Confidence 4458899999986544332211 1112357888899999999999999998 8999999999999999
Q ss_pred CCCCcEEEeeecCccccCCCCC---CccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHH
Q 012233 274 PHTHQLKICDFGSAKMLVPGEP---NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQL 349 (468)
Q Consensus 274 ~~~~~vkL~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~ 349 (468)
.++ .+||+|||+++....... .....+++.|+|||.+.+.. ++.++|||||||++|||++ |..||.+....+.+
T Consensus 159 ~~~-~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~ 236 (283)
T cd05091 159 DKL-NVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGK-FSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVI 236 (283)
T ss_pred CCC-ceEecccccccccccchheeeccCccCCccccCHHHHhcCC-CCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHH
Confidence 887 799999999876533221 12334577899999986554 8999999999999999998 89999887665555
Q ss_pred HHHHHHhCCCCHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 350 VEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 350 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
..+...... .++..++..+.+|+.+||+.+|.+||++.+++.
T Consensus 237 ~~i~~~~~~----------------------------~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~ 278 (283)
T cd05091 237 EMIRNRQVL----------------------------PCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHS 278 (283)
T ss_pred HHHHcCCcC----------------------------CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence 444331000 123457889999999999999999999999986
No 294
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=1.4e-38 Score=321.93 Aligned_cols=249 Identities=25% Similarity=0.363 Sum_probs=190.9
Q ss_pred ccceEEeceecccCceEEEEEEEcCC-----CCEEEEEEeeccc-----chHHHHHHHHHHcC-CCCcccccceeeecCC
Q 012233 136 TISYMAERVVGTGSFGVVFQAKCLET-----GDSVAIKKVLQDK-----RYKNRELQIMRLLN-HPNVVSLKHCFFSTTE 204 (468)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~~~~-----g~~vaiK~~~~~~-----~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~ 204 (468)
...|++++.||+|+||.||+|.+... +..||||++.... ..+.+|+++|+.+. ||||+++++++
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~----- 110 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGAC----- 110 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEE-----
Confidence 44699999999999999999987432 3469999885432 23457999999996 99999999998
Q ss_pred CCceEEEEEeecccchHHH-HHhhhh------------------------------------------------------
Q 012233 205 KDELYLNLVLEYISETVYR-VSKHYT------------------------------------------------------ 229 (468)
Q Consensus 205 ~~~~~~~lv~e~~~~~ll~-~~~~~~------------------------------------------------------ 229 (468)
.+...+|||||||.++.+. .+....
T Consensus 111 ~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (400)
T cd05105 111 TKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVP 190 (400)
T ss_pred ccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccch
Confidence 4445689999999865443 222110
Q ss_pred --------------------------------------hcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCee
Q 012233 230 --------------------------------------RMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLL 271 (468)
Q Consensus 230 --------------------------------------~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NIL 271 (468)
.....+++..+..++.||+.||.|||+ .||+||||||+|||
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~-~~ivH~dikp~Nil 269 (400)
T cd05105 191 MLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLAS-KNCVHRDLAARNVL 269 (400)
T ss_pred hhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHh-CCeeCCCCChHhEE
Confidence 012347788889999999999999998 89999999999999
Q ss_pred ecCCCCcEEEeeecCccccCCCCC---CccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHH
Q 012233 272 VNPHTHQLKICDFGSAKMLVPGEP---NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVD 347 (468)
Q Consensus 272 l~~~~~~vkL~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~ 347 (468)
++.++ .+||+|||+++....... .....+++.|+|||++.+.. ++.++|||||||++|||++ |..||.......
T Consensus 270 l~~~~-~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~ 347 (400)
T cd05105 270 LAQGK-IVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNL-YTTLSDVWSYGILLWEIFSLGGTPYPGMIVDS 347 (400)
T ss_pred EeCCC-EEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCC-CCchhhHHHHHHHHHHHHHCCCCCCcccchhH
Confidence 99887 799999999976533221 22345678899999987654 8999999999999999997 999998765444
Q ss_pred HHHHHHHHhCCCCHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 348 QLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 348 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
.+...+... ... ..+..++.++.++|.+||+.||.+||++.++.+
T Consensus 348 ~~~~~~~~~-----------------~~~----------~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 392 (400)
T cd05105 348 TFYNKIKSG-----------------YRM----------AKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSD 392 (400)
T ss_pred HHHHHHhcC-----------------CCC----------CCCccCCHHHHHHHHHHCccCHhHCcCHHHHHH
Confidence 433332210 000 022357889999999999999999999998765
No 295
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=1e-38 Score=341.58 Aligned_cols=249 Identities=23% Similarity=0.351 Sum_probs=190.9
Q ss_pred cceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc-------chHHHHHHHHHHcCCCCcccccceeeecCCCCceE
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELY 209 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~ 209 (468)
++|.+.+.||+|+||.||+|.+..+|+.||||++.... ....+|+.+++.++||||+++++++ .+...
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~-----~d~~~ 76 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSIC-----SDGDP 76 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEE-----eeCCE
Confidence 36999999999999999999999999999999986431 2345799999999999999999988 34446
Q ss_pred EEEEeecccchHHH-HHhhhh-------hcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEE
Q 012233 210 LNLVLEYISETVYR-VSKHYT-------RMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKI 281 (468)
Q Consensus 210 ~~lv~e~~~~~ll~-~~~~~~-------~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL 281 (468)
.|+||||++|+.+. .+.... ......++..+..++.||+.||.|||+ +||+||||||+|||++.++ .++|
T Consensus 77 lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs-~GIIHRDLKPeNILLd~dg-~vKL 154 (932)
T PRK13184 77 VYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHS-KGVLHRDLKPDNILLGLFG-EVVI 154 (932)
T ss_pred EEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHH-CCccccCCchheEEEcCCC-CEEE
Confidence 89999999876544 332211 112345567788899999999999998 8999999999999999888 7999
Q ss_pred eeecCccccCCCC-------------------CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCC
Q 012233 282 CDFGSAKMLVPGE-------------------PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPG 342 (468)
Q Consensus 282 ~DFG~a~~~~~~~-------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~ 342 (468)
+|||+++...... .....+||+.|+|||++.+.. ++.++|||||||++|||++|..||..
T Consensus 155 iDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~-~S~kSDIWSLGVILyELLTG~~PF~~ 233 (932)
T PRK13184 155 LDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVP-ASESTDIYALGVILYQMLTLSFPYRR 233 (932)
T ss_pred EecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCC-CCcHhHHHHHHHHHHHHHHCCCCCCC
Confidence 9999997652110 011246899999999997654 89999999999999999999999987
Q ss_pred CCcHHHHHHHHHHhCCCCHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 343 ESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 343 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
......... .....|. .. . -...+++.+.+++.+||+.||.+|++..+.+.
T Consensus 234 ~~~~ki~~~--~~i~~P~--------------~~-----~-----p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl 284 (932)
T PRK13184 234 KKGRKISYR--DVILSPI--------------EV-----A-----PYREIPPFLSQIAMKALAVDPAERYSSVQELK 284 (932)
T ss_pred cchhhhhhh--hhccChh--------------hc-----c-----ccccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 544332211 1000000 00 0 01347889999999999999999987666554
No 296
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=1.2e-38 Score=303.93 Aligned_cols=245 Identities=19% Similarity=0.262 Sum_probs=192.0
Q ss_pred cceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc---chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEEE
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK---RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLV 213 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~---~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv 213 (468)
.+|.+.+.||+|+||.||.|.+.. +..+|+|.+.... ....+|+.+++.++||||+++++++ .....+++|
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~lv 77 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMSEDEFIEEAKVMMKLSHEKLVQLYGVC-----TKQRPIYIV 77 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCcccHHHHHHHHHHHhcCCCCCeeeEEEEE-----ccCCCcEEE
Confidence 359999999999999999998753 4569999886432 2356799999999999999999987 333457899
Q ss_pred eecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCCC
Q 012233 214 LEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPG 293 (468)
Q Consensus 214 ~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~~ 293 (468)
|||+.++.+..... .....+++..++.++.||+.||.|||+ .||+|+||||+|||++.++ .+||+|||.++.....
T Consensus 78 ~e~~~~~~l~~~i~--~~~~~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dl~p~nili~~~~-~~kl~d~g~~~~~~~~ 153 (256)
T cd05113 78 TEYMSNGCLLNYLR--EHGKRFQPSQLLEMCKDVCEGMAYLES-KQFIHRDLAARNCLVDDQG-CVKVSDFGLSRYVLDD 153 (256)
T ss_pred EEcCCCCcHHHHHH--hcCCCCCHHHHHHHHHHHHHHHHHHHh-CCeeccccCcceEEEcCCC-CEEECCCccceecCCC
Confidence 99998764432221 123368899999999999999999998 8999999999999999887 7999999998765433
Q ss_pred CC--CccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCC
Q 012233 294 EP--NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPN 370 (468)
Q Consensus 294 ~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 370 (468)
.. .....++..|+|||.+.+.. ++.++|||||||++|+|++ |..||......+....+.+....
T Consensus 154 ~~~~~~~~~~~~~y~~pe~~~~~~-~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~------------ 220 (256)
T cd05113 154 EYTSSVGSKFPVRWSPPEVLLYSK-FSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLRL------------ 220 (256)
T ss_pred ceeecCCCccChhhCCHHHHhcCc-ccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCCC------------
Confidence 21 11234567899999996544 8999999999999999998 99999876655544444331100
Q ss_pred CccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCC
Q 012233 371 YTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAH 420 (468)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~h 420 (468)
. .+...+..+.+++.+||+.||.+||++.+++.+
T Consensus 221 ----~------------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~ 254 (256)
T cd05113 221 ----Y------------RPHLASEKVYAIMYSCWHEKAEERPTFQQLLSS 254 (256)
T ss_pred ----C------------CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHh
Confidence 0 112357899999999999999999999999864
No 297
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=1.1e-38 Score=307.72 Aligned_cols=250 Identities=22% Similarity=0.278 Sum_probs=192.5
Q ss_pred ccceEEeceecccCceEEEEEEEcC-----CCCEEEEEEeeccc-----chHHHHHHHHHHcCCCCcccccceeeecCCC
Q 012233 136 TISYMAERVVGTGSFGVVFQAKCLE-----TGDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEK 205 (468)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~~~-----~g~~vaiK~~~~~~-----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 205 (468)
..+|.+.+.||+|+||.||+|.+.. ++..||+|.+.... ..+.+|+.+++.++|+||+++++++..
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~---- 80 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFE---- 80 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEcc----
Confidence 3469999999999999999999977 67889999875332 234568999999999999999998743
Q ss_pred CceEEEEEeecccchHH-HHHhhhhh---cCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCC--CcE
Q 012233 206 DELYLNLVLEYISETVY-RVSKHYTR---MNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHT--HQL 279 (468)
Q Consensus 206 ~~~~~~lv~e~~~~~ll-~~~~~~~~---~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~--~~v 279 (468)
....++||||+.++.+ .++..... ....+++..+..++.||+.||.|||+ +|++|+||||+|||++.++ ..+
T Consensus 81 -~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~-~~ivH~dlkp~nil~~~~~~~~~~ 158 (277)
T cd05036 81 -RLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEE-NHFIHRDIAARNCLLTCKGPGRVA 158 (277)
T ss_pred -CCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCEeecccchheEEEeccCCCcce
Confidence 3347899999976544 43332211 12358889999999999999999998 8999999999999998653 259
Q ss_pred EEeeecCccccCCCCC---CccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHH
Q 012233 280 KICDFGSAKMLVPGEP---NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKI 355 (468)
Q Consensus 280 kL~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~ 355 (468)
||+|||+++....... ......+..|+|||++.+.. ++.++|||||||++|||++ |+.||.+.+..+....+...
T Consensus 159 kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~ 237 (277)
T cd05036 159 KIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGI-FTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTGG 237 (277)
T ss_pred EeccCccccccCCccceecCCCCCccHhhCCHHHHhcCC-cCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC
Confidence 9999999976532211 11223356799999997554 8999999999999999996 99999887665543332210
Q ss_pred hCCCCHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCC
Q 012233 356 LGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAH 420 (468)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~h 420 (468)
. .. .++..++..+.++|.+||+.||.+||++.++++|
T Consensus 238 -~---------------~~------------~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~ 274 (277)
T cd05036 238 -G---------------RL------------DPPKGCPGPVYRIMTDCWQHTPEDRPNFATILER 274 (277)
T ss_pred -C---------------cC------------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 0 00 0234578899999999999999999999999875
No 298
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=1.4e-38 Score=311.82 Aligned_cols=253 Identities=27% Similarity=0.430 Sum_probs=202.6
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc-------chHHHHHHHHHHcCCCCcccccceeeecCCCCceEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYL 210 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~ 210 (468)
.|...+.||+|+||.||+|++..++..||+|.+.... ....+|+.+++.++|+|++++++++.. ....
T Consensus 16 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~ 90 (308)
T cd06634 16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLR-----EHTA 90 (308)
T ss_pred HHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEc-----CCee
Confidence 3778889999999999999999999999999875321 123469999999999999999998843 3458
Q ss_pred EEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCcccc
Q 012233 211 NLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (468)
Q Consensus 211 ~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~ 290 (468)
++||||+.+++...+.. ....+++..+..++.|++.||.|||+ .|++||||||+|||++.++ .++|+|||++...
T Consensus 91 ~lv~e~~~~~l~~~~~~---~~~~l~~~~~~~~~~~l~~~l~~LH~-~~i~H~dl~p~nil~~~~~-~~kl~dfg~~~~~ 165 (308)
T cd06634 91 WLVMEYCLGSASDLLEV---HKKPLQEVEIAAVTHGALQGLAYLHS-HNMIHRDVKAGNILLSEPG-LVKLGDFGSASIM 165 (308)
T ss_pred EEEEEccCCCHHHHHHH---cCCCCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCHHhEEECCCC-cEEECCcccceee
Confidence 89999999877665432 23458889999999999999999998 8999999999999999887 7999999998765
Q ss_pred CCCCCCccccccCCccccccccC--CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcC
Q 012233 291 VPGEPNISYICSRYYRAPELIFG--ATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMN 368 (468)
Q Consensus 291 ~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 368 (468)
.. .....+++.|+|||.+.+ ...++.++|||||||++|+|++|..||...+..+....+.... .
T Consensus 166 ~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~-~---------- 231 (308)
T cd06634 166 AP---ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNE-S---------- 231 (308)
T ss_pred cC---cccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcC-C----------
Confidence 33 234568899999999752 2347889999999999999999999997765554444333210 0
Q ss_pred CCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCCCCC
Q 012233 369 PNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPN 430 (468)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~~~~ 430 (468)
+. .....++..+.+||.+||..+|.+||++.+++.||||.....+.
T Consensus 232 --------~~--------~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~~~~~ 277 (308)
T cd06634 232 --------PA--------LQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPPT 277 (308)
T ss_pred --------CC--------cCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCccccccCChh
Confidence 00 01124678899999999999999999999999999998854433
No 299
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=1.3e-38 Score=308.51 Aligned_cols=255 Identities=28% Similarity=0.408 Sum_probs=204.3
Q ss_pred cceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc---chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEEE
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK---RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLV 213 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~---~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv 213 (468)
..|.....||+|+||.||+|.+..++..|++|++.... ....+|+++++.++|+||+++++++.. ..+.|+|
T Consensus 19 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~~lv 93 (286)
T cd06614 19 ELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKHPNIVDYYDSYLV-----GDELWVV 93 (286)
T ss_pred ccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHCCCCCeeEEEEEEEE-----CCEEEEE
Confidence 35889999999999999999998889999999986543 345679999999999999999998844 3468999
Q ss_pred eecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCCC
Q 012233 214 LEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPG 293 (468)
Q Consensus 214 ~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~~ 293 (468)
+||+.++.+....... ...++...+..++.|++.||.|||+ .||+|+||+|+||+++.++ .++|+|||++......
T Consensus 94 ~e~~~~~~L~~~l~~~--~~~l~~~~~~~i~~~i~~~L~~lH~-~gi~H~dl~p~ni~i~~~~-~~~l~d~~~~~~~~~~ 169 (286)
T cd06614 94 MEYMDGGSLTDIITQN--FVRMNEPQIAYVCREVLQGLEYLHS-QNVIHRDIKSDNILLSKDG-SVKLADFGFAAQLTKE 169 (286)
T ss_pred EeccCCCcHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHh-CCeeeCCCChhhEEEcCCC-CEEECccchhhhhccc
Confidence 9999965444322211 1368999999999999999999998 9999999999999999887 7999999998655332
Q ss_pred C-CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCCc
Q 012233 294 E-PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYT 372 (468)
Q Consensus 294 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 372 (468)
. ......++..|+|||.+.+.. ++.++|+|||||++|+|++|..||...+.......+.... .+
T Consensus 170 ~~~~~~~~~~~~y~~PE~~~~~~-~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~-~~------------- 234 (286)
T cd06614 170 KSKRNSVVGTPYWMAPEVIKRKD-YGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKG-IP------------- 234 (286)
T ss_pred hhhhccccCCcccCCHhHhcCCC-CCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcC-CC-------------
Confidence 2 223345788999999986554 8999999999999999999999998776655444433210 00
Q ss_pred cCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCC
Q 012233 373 EFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLR 427 (468)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~ 427 (468)
. + .....++.++++||.+||+.+|.+||++.+++.||||+...
T Consensus 235 ~--~----------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~ 277 (286)
T cd06614 235 P--L----------KNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKKAC 277 (286)
T ss_pred C--C----------cchhhCCHHHHHHHHHHhccChhhCcCHHHHhhChHhhccC
Confidence 0 0 01123678999999999999999999999999999999843
No 300
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=1.9e-38 Score=303.05 Aligned_cols=245 Identities=24% Similarity=0.330 Sum_probs=193.0
Q ss_pred ccceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc---chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEE
Q 012233 136 TISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK---RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNL 212 (468)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~---~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~l 212 (468)
..+|++.+.||+|+||.||+|.+. ++..||+|.+.... ....+|+.+++.++|+||+++++++ .+....++
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~l 78 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVV-----TKEEPIYI 78 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCchhHHHHHHHHHHHHhCCCCCeeeEEEEE-----cCCCCcEE
Confidence 456999999999999999999864 56789999875432 3445799999999999999999887 44445889
Q ss_pred EeecccchHH-HHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccC
Q 012233 213 VLEYISETVY-RVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (468)
Q Consensus 213 v~e~~~~~ll-~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~ 291 (468)
||||+.++.+ ..+.. .....+++..+..++.|++.||.|||+ .|++||||||+||+++.++ .++|+|||++....
T Consensus 79 v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~LH~-~~i~H~dl~p~nili~~~~-~~~l~dfg~~~~~~ 154 (261)
T cd05072 79 ITEYMAKGSLLDFLKS--DEGGKVLLPKLIDFSAQIAEGMAYIER-KNYIHRDLRAANVLVSESL-MCKIADFGLARVIE 154 (261)
T ss_pred EEecCCCCcHHHHHHH--hcCCCCCHHHHHHHHHHHHHHHHHHHH-CCeeccccchhhEEecCCC-cEEECCCccceecC
Confidence 9999986544 43322 124567888899999999999999998 8999999999999999887 79999999997654
Q ss_pred CCCC--CccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcC
Q 012233 292 PGEP--NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEIKCMN 368 (468)
Q Consensus 292 ~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 368 (468)
.... .....++..|+|||.+.+. .++.++|||||||++|+|++ |..||......+....+....
T Consensus 155 ~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~------------ 221 (261)
T cd05072 155 DNEYTAREGAKFPIKWTAPEAINFG-SFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGY------------ 221 (261)
T ss_pred CCceeccCCCccceecCCHHHhccC-CCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCC------------
Confidence 3221 1223456789999998654 48899999999999999998 999998776655444433210
Q ss_pred CCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 369 PNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
.++ ....++.++.++|.+||..||++||++++++.
T Consensus 222 ------~~~----------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 256 (261)
T cd05072 222 ------RMP----------RMENCPDELYDIMKTCWKEKAEERPTFDYLQS 256 (261)
T ss_pred ------CCC----------CCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 001 11347889999999999999999999999865
No 301
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=2.1e-38 Score=307.52 Aligned_cols=252 Identities=24% Similarity=0.331 Sum_probs=194.7
Q ss_pred cceEEeceecccCceEEEEEEEc-----CCCCEEEEEEeeccc----chHHHHHHHHHHcCCCCcccccceeeecCCCCc
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCL-----ETGDSVAIKKVLQDK----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDE 207 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~-----~~g~~vaiK~~~~~~----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 207 (468)
.+|.+.+.||+|+||.||++.+. .++..+|+|.+.... ..+.+|+.+++.++||||+++++++. ..
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~ 79 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCV-----EG 79 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEe-----cC
Confidence 46999999999999999999863 345679999885432 23567999999999999999999883 34
Q ss_pred eEEEEEeecccchHH-HHHhhhh---------hcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCC
Q 012233 208 LYLNLVLEYISETVY-RVSKHYT---------RMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTH 277 (468)
Q Consensus 208 ~~~~lv~e~~~~~ll-~~~~~~~---------~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~ 277 (468)
.+.++||||+.++.+ +.+.... .....+++..+..++.||+.||+|||+ +||+||||||+|||++.++
T Consensus 80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~-~~i~H~dlkp~Nili~~~~- 157 (288)
T cd05093 80 DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLAS-QHFVHRDLATRNCLVGENL- 157 (288)
T ss_pred CccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCeeecccCcceEEEccCC-
Confidence 468899999986544 3333211 112348999999999999999999998 8999999999999999888
Q ss_pred cEEEeeecCccccCCCCC---CccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHH
Q 012233 278 QLKICDFGSAKMLVPGEP---NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEII 353 (468)
Q Consensus 278 ~vkL~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~~~i~ 353 (468)
.++|+|||++........ .....++..|+|||++.+. .++.++|+|||||++|+|++ |..||......+.+..+.
T Consensus 158 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~ 236 (288)
T cd05093 158 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYR-KFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECIT 236 (288)
T ss_pred cEEeccCCccccccCCceeecCCCCCccccccCHHHhccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence 799999999976533221 1223456789999998654 48999999999999999998 999998776655544443
Q ss_pred HHhCCCCHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCC
Q 012233 354 KILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDL 426 (468)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~ 426 (468)
... .+ ..+..++.++.+||.+||+.||.+|||+.+++. +|+++
T Consensus 237 ~~~-------------------~~---------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~--~l~~~ 279 (288)
T cd05093 237 QGR-------------------VL---------QRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHS--LLQNL 279 (288)
T ss_pred cCC-------------------cC---------CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH--HHHHH
Confidence 210 00 012346789999999999999999999999865 34443
No 302
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.8e-39 Score=317.36 Aligned_cols=262 Identities=27% Similarity=0.352 Sum_probs=191.8
Q ss_pred ccceEEeceecccCceEEEEEEEcCCCCEEEEEEeecc----cchHHHHHHHHHHcCCCCcccccceeeecCCCCceEEE
Q 012233 136 TISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD----KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (468)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~----~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~ 211 (468)
+++|....+||+|+||.||+|... +|..||||++... ...+.+|+.++.+++|||+|+|+|||..... ..+
T Consensus 74 T~~Fs~~~~ig~Ggfg~VYkG~l~-~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~----~~~ 148 (361)
T KOG1187|consen 74 TNNFSESNLIGEGGFGTVYKGVLS-DGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYCLEGGE----HRL 148 (361)
T ss_pred HhCCchhcceecCCCeEEEEEEEC-CCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEEecCCc----eEE
Confidence 356888889999999999999964 4589999988543 3457889999999999999999999954332 477
Q ss_pred EEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcC--CccccCCCCCCeeecCCCCcEEEeeecCccc
Q 012233 212 LVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVV--GVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (468)
Q Consensus 212 lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~--givHrDlkp~NILl~~~~~~vkL~DFG~a~~ 289 (468)
||+||++.|.|....+..... .++|....+|+.++++||+|||+.. .|||||||++|||||.+. +.||+|||+|+.
T Consensus 149 LVYEym~nGsL~d~L~~~~~~-~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~-~aKlsDFGLa~~ 226 (361)
T KOG1187|consen 149 LVYEYMPNGSLEDHLHGKKGE-PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDF-NAKLSDFGLAKL 226 (361)
T ss_pred EEEEccCCCCHHHHhCCCCCC-CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCC-CEEccCccCccc
Confidence 999999977665544433222 7899999999999999999999744 399999999999999888 899999999976
Q ss_pred cCC-CCCCccc-cccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCC--cHHHHHHHHH-HhCCCCHHHH
Q 012233 290 LVP-GEPNISY-ICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGES--GVDQLVEIIK-ILGTPTREEI 364 (468)
Q Consensus 290 ~~~-~~~~~~~-~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~--~~~~~~~i~~-~~~~~~~~~~ 364 (468)
... ....... .||..|+|||.+.. ...+.++|||||||+|.||++|+.+..... ....+..+.. .+...
T Consensus 227 ~~~~~~~~~~~~~gt~gY~~PEy~~~-g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~----- 300 (361)
T KOG1187|consen 227 GPEGDTSVSTTVMGTFGYLAPEYAST-GKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEG----- 300 (361)
T ss_pred CCccccceeeecCCCCccCChhhhcc-CCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCc-----
Confidence 554 3333333 89999999999965 458999999999999999999998887532 1111222221 11110
Q ss_pred hhcCCCCccCCCCcccCCCccccccc-CCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 365 KCMNPNYTEFKFPQIKAHPWHKIFHK-RMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
...++-=|.+.. ..+.. ..-..+..+..+|++.+|..||++.|++.
T Consensus 301 -----~~~eiiD~~l~~----~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~ 347 (361)
T KOG1187|consen 301 -----KLREIVDPRLKE----GEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVK 347 (361)
T ss_pred -----chhheeCCCccC----CCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHH
Confidence 001111111110 00100 01123667889999999999999999754
No 303
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=2e-38 Score=305.41 Aligned_cols=248 Identities=24% Similarity=0.314 Sum_probs=193.0
Q ss_pred ccceEEeceecccCceEEEEEEEcCC-----CCEEEEEEeecccc-----hHHHHHHHHHHcCCCCcccccceeeecCCC
Q 012233 136 TISYMAERVVGTGSFGVVFQAKCLET-----GDSVAIKKVLQDKR-----YKNRELQIMRLLNHPNVVSLKHCFFSTTEK 205 (468)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~~~~-----g~~vaiK~~~~~~~-----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 205 (468)
.++|.+.+.||+|+||.||+|.+... +..||+|.+..... ...+|+.+++.++||||+++++++ .
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~ 79 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVV-----S 79 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEE-----c
Confidence 35799999999999999999998643 37899998754432 345789999999999999999988 3
Q ss_pred CceEEEEEeecccchHH-HHHhhhhh------cCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCc
Q 012233 206 DELYLNLVLEYISETVY-RVSKHYTR------MNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQ 278 (468)
Q Consensus 206 ~~~~~~lv~e~~~~~ll-~~~~~~~~------~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~ 278 (468)
...+.++||||++++.+ ..+..... ....+++..+..++.||+.||.|||+ .||+||||||+|||++.++ .
T Consensus 80 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~di~p~nill~~~~-~ 157 (277)
T cd05032 80 TGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAA-KKFVHRDLAARNCMVAEDL-T 157 (277)
T ss_pred CCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHh-CCccccccChheEEEcCCC-C
Confidence 44568899999986544 44332221 12346788899999999999999998 8999999999999999888 7
Q ss_pred EEEeeecCccccCCCC---CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHH
Q 012233 279 LKICDFGSAKMLVPGE---PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIK 354 (468)
Q Consensus 279 vkL~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~ 354 (468)
+||+|||+++...... ......++..|+|||.+.+.. ++.++|||||||++|||++ |..||...+..+....+..
T Consensus 158 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~ 236 (277)
T cd05032 158 VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGV-FTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVID 236 (277)
T ss_pred EEECCcccchhhccCcccccCCCCCccccccCHHHHhcCC-CCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHhc
Confidence 9999999987654322 122345678899999986544 8999999999999999998 9999987665544333321
Q ss_pred HhCCCCHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 355 ILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
... .. ++...+.++.+||.+||+.+|.+|||+.+++.
T Consensus 237 -~~~---------------~~------------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 273 (277)
T cd05032 237 -GGH---------------LD------------LPENCPDKLLELMRMCWQYNPKMRPTFLEIVS 273 (277)
T ss_pred -CCC---------------CC------------CCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 000 00 22346889999999999999999999999976
No 304
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=1.9e-38 Score=303.84 Aligned_cols=249 Identities=30% Similarity=0.496 Sum_probs=194.6
Q ss_pred cceEEeceecccCceEEEEEEEcCCCCEEEEEEeecc-------cchHHHHHHHHHHcCCCCcccccceeeecCCCCceE
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD-------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELY 209 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~-------~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~ 209 (468)
.+|.+.+.||+|+||.||+|.+..++..+|||.+... .....+|+.+++.++|+||++++++|. ....
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-----~~~~ 76 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFI-----EDNE 76 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeE-----eCCe
Confidence 3589999999999999999999999999999987532 123456999999999999999999884 3345
Q ss_pred EEEEeecccch-HHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCcc
Q 012233 210 LNLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAK 288 (468)
Q Consensus 210 ~~lv~e~~~~~-ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~ 288 (468)
.+++|||+.++ +.+++.........+++..++.++.||+.||.|||+ +||+|+||||+||+++.++ .++|+|||++.
T Consensus 77 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~-~~i~H~dl~p~nili~~~~-~~~l~dfg~~~ 154 (267)
T cd08229 77 LNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHS-RRVMHRDIKPANVFITATG-VVKLGDLGLGR 154 (267)
T ss_pred EEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEEcCCC-CEEECcchhhh
Confidence 88999999865 444444333445668999999999999999999998 8999999999999999887 79999999987
Q ss_pred ccCCCCC-CccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcH-HHHHHHHHHhCCCCHHHHhh
Q 012233 289 MLVPGEP-NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGV-DQLVEIIKILGTPTREEIKC 366 (468)
Q Consensus 289 ~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~ 366 (468)
....... .....++..|+|||.+.+.. ++.++|+||||+++|+|++|..||.+.... ....+.+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~ape~~~~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~------------ 221 (267)
T cd08229 155 FFSSKTTAAHSLVGTPYYMSPERIHENG-YNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIE------------ 221 (267)
T ss_pred ccccCCcccccccCCcCccCHHHhcCCC-ccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhh------------
Confidence 6543322 22457889999999986544 889999999999999999999999764322 11111111
Q ss_pred cCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 367 MNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
...++. ..+..+++++.+||.+||..||.+|||+.+++.
T Consensus 222 ------~~~~~~--------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~ 260 (267)
T cd08229 222 ------QCDYPP--------LPSDHYSEELRQLVNMCINPDPEKRPDITYVYD 260 (267)
T ss_pred ------cCCCCC--------CCcccccHHHHHHHHHhcCCCcccCCCHHHHHH
Confidence 001110 011347889999999999999999999997754
No 305
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=3.2e-38 Score=300.43 Aligned_cols=242 Identities=27% Similarity=0.390 Sum_probs=194.1
Q ss_pred ceecccCceEEEEEEEcCC---CCEEEEEEeeccc-----chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEEEe
Q 012233 143 RVVGTGSFGVVFQAKCLET---GDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVL 214 (468)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~~---g~~vaiK~~~~~~-----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv~ 214 (468)
+.||+|+||.||+|.+... +..|++|.+.... ....+|+.+++.++|+||+++++++. ....+++||
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-----~~~~~~lv~ 75 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCT-----EEEPLYLVL 75 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeec-----CCCceEEEE
Confidence 4699999999999999765 8899999886543 34457999999999999999999884 345689999
Q ss_pred ecccch-HHHHHhhhhhc-----CCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCcc
Q 012233 215 EYISET-VYRVSKHYTRM-----NQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAK 288 (468)
Q Consensus 215 e~~~~~-ll~~~~~~~~~-----~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~ 288 (468)
||+.++ +.+.+...... ...+++..++.++.|++.||+|||+ +||+|+||||+||+++.++ .++|+|||.+.
T Consensus 76 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~-~~i~H~di~p~nili~~~~-~~~l~dfg~~~ 153 (262)
T cd00192 76 EYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLAS-KKFVHRDLAARNCLVGEDL-VVKISDFGLSR 153 (262)
T ss_pred EeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHc-CCcccCccCcceEEECCCC-cEEEccccccc
Confidence 999654 44443332111 3678999999999999999999998 9999999999999999887 79999999998
Q ss_pred ccCCCC---CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHH
Q 012233 289 MLVPGE---PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEI 364 (468)
Q Consensus 289 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 364 (468)
...... ......++..|+|||.+.+. .++.++|||||||++|+|++ |..||......+....+...
T Consensus 154 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~--------- 223 (262)
T cd00192 154 DVYDDDYYRKKTGGKLPIRWMAPESLKDG-IFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKG--------- 223 (262)
T ss_pred ccccccccccccCCCcCccccCHHHhccC-CcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC---------
Confidence 765432 23345678899999998665 58999999999999999998 69999887655544443320
Q ss_pred hhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCC
Q 012233 365 KCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAH 420 (468)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~h 420 (468)
+....+..++.++.++|.+||..||.+|||+.+++++
T Consensus 224 -------------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 260 (262)
T cd00192 224 -------------------YRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVER 260 (262)
T ss_pred -------------------CCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 0011234578999999999999999999999999874
No 306
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=2.1e-39 Score=341.59 Aligned_cols=258 Identities=29% Similarity=0.430 Sum_probs=197.0
Q ss_pred ccceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc-----chHHHHHHHHHHcCCCCcccccceeeecCC------
Q 012233 136 TISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTE------ 204 (468)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~------ 204 (468)
..+|+..++||+||||.||+++++-+|..||||+|.... ....+|+.+|.+|+|||||+++..+.....
T Consensus 478 ~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~e 557 (1351)
T KOG1035|consen 478 LNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLE 557 (1351)
T ss_pred hhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccccc
Confidence 346888999999999999999999999999999985542 223579999999999999998765422100
Q ss_pred -------------------------------------------------------------------C------------
Q 012233 205 -------------------------------------------------------------------K------------ 205 (468)
Q Consensus 205 -------------------------------------------------------------------~------------ 205 (468)
+
T Consensus 558 i~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e 637 (1351)
T KOG1035|consen 558 IVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSE 637 (1351)
T ss_pred ccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccC
Confidence 0
Q ss_pred -----------------------------CceEEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHh
Q 012233 206 -----------------------------DELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHH 256 (468)
Q Consensus 206 -----------------------------~~~~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~ 256 (468)
...++||=||||...+++.+........ ....+|++++||+.||+|+|+
T Consensus 638 ~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~--~~d~~wrLFreIlEGLaYIH~ 715 (1351)
T KOG1035|consen 638 GSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS--QRDEAWRLFREILEGLAYIHD 715 (1351)
T ss_pred CccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch--hhHHHHHHHHHHHHHHHHHHh
Confidence 0157899999999988876655332221 467799999999999999998
Q ss_pred cCCccccCCCCCCeeecCCCCcEEEeeecCccccC-------------------CCCCCccccccCCccccccccCCC--
Q 012233 257 VVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV-------------------PGEPNISYICSRYYRAPELIFGAT-- 315 (468)
Q Consensus 257 ~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~-------------------~~~~~~~~~gt~~y~aPE~~~~~~-- 315 (468)
.|||||||||.|||++.+. .|||+|||+|+... +....++.+||.-|+|||++.+..
T Consensus 716 -~giIHRDLKP~NIFLd~~~-~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~ 793 (1351)
T KOG1035|consen 716 -QGIIHRDLKPRNIFLDSRN-SVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSN 793 (1351)
T ss_pred -CceeeccCCcceeEEcCCC-CeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccc
Confidence 8999999999999999887 79999999997621 111345678999999999997766
Q ss_pred CCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCCccCCCCcccCCCcccccccCCCHH
Q 012233 316 EYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPE 395 (468)
Q Consensus 316 ~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (468)
.|+.|+|+||||+|+|||+. ||.. .++....+ ..+..+ .+|.. ..|+..--+.
T Consensus 794 ~Yn~KiDmYSLGIVlFEM~y---PF~T--sMERa~iL-~~LR~g---------------~iP~~------~~f~~~~~~~ 846 (1351)
T KOG1035|consen 794 KYNSKIDMYSLGIVLFEMLY---PFGT--SMERASIL-TNLRKG---------------SIPEP------ADFFDPEHPE 846 (1351)
T ss_pred cccchhhhHHHHHHHHHHhc---cCCc--hHHHHHHH-HhcccC---------------CCCCC------cccccccchH
Confidence 69999999999999999996 5643 33333322 222211 11111 1122223355
Q ss_pred HHHHHHHhcccCCCCCCCHHHHhCCCCCC
Q 012233 396 ALDLVSRLLQYSPSLRCTALEACAHPFFD 424 (468)
Q Consensus 396 l~~li~~~L~~dP~~R~s~~ell~hp~f~ 424 (468)
-..+|++||+.||++||||.|+|++.||-
T Consensus 847 e~slI~~Ll~hdP~kRPtA~eLL~s~llp 875 (1351)
T KOG1035|consen 847 EASLIRWLLSHDPSKRPTATELLNSELLP 875 (1351)
T ss_pred HHHHHHHHhcCCCccCCCHHHHhhccCCC
Confidence 67899999999999999999999999995
No 307
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=5.3e-38 Score=300.01 Aligned_cols=244 Identities=23% Similarity=0.312 Sum_probs=191.8
Q ss_pred cceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc---chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEEE
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK---RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLV 213 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~---~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv 213 (468)
.+|++.+.||+|+||.||+|.+. ++..||+|.+.... ....+|+.+++.++||||+++++++ ......++|
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~lv 79 (261)
T cd05068 6 TSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVC-----TLEEPIYIV 79 (261)
T ss_pred hheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCcccHHHHHHHHHHHHHCCCCCccceeEEE-----ecCCCeeee
Confidence 46999999999999999999974 45789999886533 3456799999999999999999987 333458899
Q ss_pred eecccch-HHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCC
Q 012233 214 LEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP 292 (468)
Q Consensus 214 ~e~~~~~-ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~ 292 (468)
|||+.++ +.+.+... ....+++..+..++.|++.||.|||+ .||+|+||||+||+++.++ .++|+|||++.....
T Consensus 80 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dl~p~Nil~~~~~-~~~l~dfg~~~~~~~ 155 (261)
T cd05068 80 TELMKYGSLLEYLQGG--AGRALKLPQLIDMAAQVASGMAYLEA-QNYIHRDLAARNVLVGENN-ICKVADFGLARVIKE 155 (261)
T ss_pred eecccCCcHHHHHhcc--CCCCCCHHHHHHHHHHHHHHHHHHHh-CCeeeccCCcceEEEcCCC-CEEECCcceEEEccC
Confidence 9999654 44433321 13468899999999999999999998 8999999999999999888 799999999987643
Q ss_pred CCCC--ccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCC
Q 012233 293 GEPN--ISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP 369 (468)
Q Consensus 293 ~~~~--~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 369 (468)
.... .....+..|+|||.+.+. .++.++|+|||||++|+|++ |+.||.+......+..+....
T Consensus 156 ~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~------------- 221 (261)
T cd05068 156 DIYEAREGAKFPIKWTAPEAALYN-RFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGY------------- 221 (261)
T ss_pred CcccccCCCcCceeccCccccccC-CCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC-------------
Confidence 2211 112224579999998654 48999999999999999999 999998876555444433210
Q ss_pred CCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 370 NYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
..+ .+..++..+.+++.+||+.||.+||++.+++.
T Consensus 222 -----~~~----------~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~ 256 (261)
T cd05068 222 -----RMP----------CPPGCPKELYDIMLDCWKEDPDDRPTFETLQW 256 (261)
T ss_pred -----CCC----------CCCcCCHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence 000 12346889999999999999999999999864
No 308
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=4.5e-38 Score=298.02 Aligned_cols=238 Identities=36% Similarity=0.588 Sum_probs=194.5
Q ss_pred ecccCceEEEEEEEcCCCCEEEEEEeeccc-------chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEEEeecc
Q 012233 145 VGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVLEYI 217 (468)
Q Consensus 145 lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv~e~~ 217 (468)
||.|+||.||++.+..+++.||+|.+.... ....+|+.+++.++|+||+++++.+ .+....|+||||+
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~~v~e~~ 75 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAF-----QTEEKLYLVLEYA 75 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHe-----ecCCeeEEEEecC
Confidence 699999999999998889999999885432 2456799999999999999999988 4555789999999
Q ss_pred cch-HHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCCC-CC
Q 012233 218 SET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPG-EP 295 (468)
Q Consensus 218 ~~~-ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~~-~~ 295 (468)
.++ +.+.+.. ...+++..+..++.|++.||.|||+ .+++|+||+|+||+++.++ .++|+|||.+...... ..
T Consensus 76 ~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~~l~~lh~-~~~~H~~l~p~ni~~~~~~-~~~l~d~~~~~~~~~~~~~ 149 (250)
T cd05123 76 PGGELFSHLSK----EGRFSEERARFYAAEIVLALEYLHS-LGIIYRDLKPENILLDADG-HIKLTDFGLAKELSSEGSR 149 (250)
T ss_pred CCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHH-CCceecCCCcceEEEcCCC-cEEEeecCcceecccCCCc
Confidence 654 4443322 3468899999999999999999998 8999999999999999887 7999999998765433 22
Q ss_pred CccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCCccCC
Q 012233 296 NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFK 375 (468)
Q Consensus 296 ~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 375 (468)
.....++..|+|||.+.+.. ++.++|+||||+++|+|++|..||...+.......+.. ....
T Consensus 150 ~~~~~~~~~~~~Pe~~~~~~-~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~-----------------~~~~ 211 (250)
T cd05123 150 TNTFCGTPEYLAPEVLLGKG-YGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILK-----------------DPLR 211 (250)
T ss_pred ccCCcCCccccChHHhCCCC-CCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhc-----------------CCCC
Confidence 34556788999999986554 78899999999999999999999977665333333322 1111
Q ss_pred CCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCH---HHHhCCCCC
Q 012233 376 FPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTA---LEACAHPFF 423 (468)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~---~ell~hp~f 423 (468)
++..++..+.++|++||..||.+||++ .++++||||
T Consensus 212 ------------~~~~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~~~f 250 (250)
T cd05123 212 ------------FPEFLSPEARDLISGLLQKDPTKRLGSGGAEEIKAHPFF 250 (250)
T ss_pred ------------CCCCCCHHHHHHHHHHhcCCHhhCCCcccHHHHHhCCCC
Confidence 234468899999999999999999999 999999998
No 309
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=1.4e-38 Score=303.85 Aligned_cols=244 Identities=22% Similarity=0.316 Sum_probs=195.3
Q ss_pred cceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc----chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEE
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNL 212 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~l 212 (468)
.+|.+.+.||.|+||.||+|.+.. +..+|+|.+.... ....+|+.+++.++|+||+++++++ .+..+.++
T Consensus 6 ~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~l 79 (261)
T cd05148 6 EEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVC-----SVGEPVYI 79 (261)
T ss_pred HHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeE-----ecCCCeEE
Confidence 469999999999999999999877 8999999886543 2456799999999999999999987 34445889
Q ss_pred Eeecccch-HHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccC
Q 012233 213 VLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (468)
Q Consensus 213 v~e~~~~~-ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~ 291 (468)
||||++++ +.+.+... ....+++..+..++.||+.||.|||+ +||+|+||||+||||+.++ .+||+|||.+....
T Consensus 80 v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~i~~al~~lH~-~~i~h~dl~~~nilv~~~~-~~kl~d~g~~~~~~ 155 (261)
T cd05148 80 ITELMEKGSLLAFLRSP--EGQVLPVASLIDMACQVAEGMAYLEE-QNSIHRDLAARNILVGEDL-VCKVADFGLARLIK 155 (261)
T ss_pred EEeecccCCHHHHHhcC--CCCCCCHHHHHHHHHHHHHHHHHHHH-CCeeccccCcceEEEcCCc-eEEEccccchhhcC
Confidence 99999875 44433321 23567889999999999999999998 8999999999999999888 79999999997653
Q ss_pred CCCC-CccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCC
Q 012233 292 PGEP-NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP 369 (468)
Q Consensus 292 ~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 369 (468)
.... .....++..|+|||.+.+. .++.++|||||||++|+|++ |+.||...+..+.+..+......
T Consensus 156 ~~~~~~~~~~~~~~~~~PE~~~~~-~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~----------- 223 (261)
T cd05148 156 EDVYLSSDKKIPYKWTAPEAASHG-TFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGYRM----------- 223 (261)
T ss_pred CccccccCCCCceEecCHHHHccC-CCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhCCcC-----------
Confidence 3221 1123456789999998654 48899999999999999998 89999887765555544331100
Q ss_pred CCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 370 NYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
..+..+++.+.++|.+||+.||.+|||+.++++
T Consensus 224 -----------------~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~ 256 (261)
T cd05148 224 -----------------PCPAKCPQEIYKIMLECWAAEPEDRPSFKALRE 256 (261)
T ss_pred -----------------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 022357889999999999999999999999875
No 310
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=2.1e-38 Score=301.97 Aligned_cols=242 Identities=21% Similarity=0.313 Sum_probs=190.6
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc---chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEEEe
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK---RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVL 214 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~---~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv~ 214 (468)
+|.+.+.||+|+||.||+|.+. ++..+|+|.+.... ....+|+.+++.++||||+++++++ ....+.|+||
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~lv~ 78 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAMSEDDFIEEAKVMMKLSHPNLVQLYGVC-----TKQRPIFIVT 78 (256)
T ss_pred HcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEEEEEEEE-----cCCCceEEEE
Confidence 5889999999999999999875 46789999886432 2345799999999999999999887 3444688999
Q ss_pred ecccchH-HHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCCC
Q 012233 215 EYISETV-YRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPG 293 (468)
Q Consensus 215 e~~~~~l-l~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~~ 293 (468)
||++++. .+.+.. ....+++..+..++.||+.||.|||+ .||+||||||+|||++.++ .+||+|||+++.....
T Consensus 79 e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~~l~~lH~-~~i~H~dl~p~ni~i~~~~-~~kl~dfg~~~~~~~~ 153 (256)
T cd05059 79 EYMANGCLLNYLRE---RKGKLGTEWLLDMCSDVCEAMEYLES-NGFIHRDLAARNCLVGEDN-VVKVSDFGLARYVLDD 153 (256)
T ss_pred ecCCCCCHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHH-CCcccccccHhhEEECCCC-cEEECCcccceecccc
Confidence 9998654 433321 23468899999999999999999998 8999999999999999888 7999999998765432
Q ss_pred CCC--ccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCC
Q 012233 294 EPN--ISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPN 370 (468)
Q Consensus 294 ~~~--~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 370 (468)
... ....++..|+|||.+.+. .++.++|+|||||++|+|++ |..||...+..+....+.....
T Consensus 154 ~~~~~~~~~~~~~y~~Pe~~~~~-~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~------------- 219 (256)
T cd05059 154 QYTSSQGTKFPVKWAPPEVFDYS-RFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGYR------------- 219 (256)
T ss_pred cccccCCCCCCccccCHHHhccC-CCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcCCc-------------
Confidence 211 112234579999998754 48999999999999999998 8999987665554443322100
Q ss_pred CccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 371 YTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
. ..+..++.++.+++.+||..+|.+|||+.+++.
T Consensus 220 ---~------------~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~ 253 (256)
T cd05059 220 ---L------------YRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLS 253 (256)
T ss_pred ---C------------CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 0 022347889999999999999999999999986
No 311
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=3.4e-38 Score=302.19 Aligned_cols=246 Identities=23% Similarity=0.297 Sum_probs=192.4
Q ss_pred cceEEeceecccCceEEEEEEEcCC---CCEEEEEEeeccc-----chHHHHHHHHHHcCCCCcccccceeeecCCCCce
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLET---GDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDEL 208 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~---g~~vaiK~~~~~~-----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 208 (468)
.+|.+.+.||+|+||.||+|.+..+ ...||+|.+.... ..+.+|+.+++.++||||+++++++ ....
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~ 78 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVV-----TKSR 78 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEE-----ecCC
Confidence 4699999999999999999998654 4579999875432 2344699999999999999999987 3344
Q ss_pred EEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCcc
Q 012233 209 YLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAK 288 (468)
Q Consensus 209 ~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~ 288 (468)
..++||||+.++.+..... .....+++..+..++.|++.||.|||+ +||+|+||||+|||++.++ .++|+|||++.
T Consensus 79 ~~~iv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~~~l~~~l~~Lh~-~~i~H~di~p~nili~~~~-~~~l~dfg~~~ 154 (266)
T cd05033 79 PVMIITEYMENGSLDKFLR--ENDGKFTVGQLVGMLRGIASGMKYLSE-MNYVHRDLAARNILVNSNL-VCKVSDFGLSR 154 (266)
T ss_pred ceEEEEEcCCCCCHHHHHH--hccCCCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCcceEEEcCCC-CEEECccchhh
Confidence 5889999998765543222 223468899999999999999999998 8999999999999999887 79999999998
Q ss_pred ccCCCCCC---ccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHH
Q 012233 289 MLVPGEPN---ISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEI 364 (468)
Q Consensus 289 ~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 364 (468)
........ ....++..|+|||.+.+. .++.++|||||||++|+|++ |..||......+....+....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~-~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~-------- 225 (266)
T cd05033 155 RLEDSEATYTTKGGKIPIRWTAPEAIAYR-KFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGY-------- 225 (266)
T ss_pred cccccccceeccCCCCCccccChhhhccC-CCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCC--------
Confidence 76422111 122346789999998654 48999999999999999997 999997766555444332210
Q ss_pred hhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCC
Q 012233 365 KCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAH 420 (468)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~h 420 (468)
..+ .+..+++.+.+|+.+||+.+|.+||++.+++++
T Consensus 226 ----------~~~----------~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~ 261 (266)
T cd05033 226 ----------RLP----------PPMDCPSALYQLMLDCWQKDRNERPTFSQIVST 261 (266)
T ss_pred ----------CCC----------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 000 123478899999999999999999999999863
No 312
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.2e-39 Score=295.28 Aligned_cols=255 Identities=26% Similarity=0.485 Sum_probs=210.3
Q ss_pred CCcccceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc-------chHHHHHHHHHHc-CCCCcccccceeeecCC
Q 012233 133 PKQTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLL-NHPNVVSLKHCFFSTTE 204 (468)
Q Consensus 133 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-------~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~ 204 (468)
.....+|.+.++||+|+|++|.+++.+.+.+.||+|++++.. .-...|..+..+. +||.+|-|+.||
T Consensus 246 ~l~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscf----- 320 (593)
T KOG0695|consen 246 GLGLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCF----- 320 (593)
T ss_pred ccccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhh-----
Confidence 344557999999999999999999999999999999886532 1223566776665 699999999999
Q ss_pred CCceEEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeee
Q 012233 205 KDELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDF 284 (468)
Q Consensus 205 ~~~~~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DF 284 (468)
+.+..+|+|.||++|+-+-. + ....+++|+..++.|...|+.||.|||+ +|||+||||.+|+|+|..++ +||+|+
T Consensus 321 qtesrlffvieyv~ggdlmf--h-mqrqrklpeeharfys~ei~lal~flh~-rgiiyrdlkldnvlldaegh-ikltdy 395 (593)
T KOG0695|consen 321 QTESRLFFVIEYVNGGDLMF--H-MQRQRKLPEEHARFYSAEICLALNFLHE-RGIIYRDLKLDNVLLDAEGH-IKLTDY 395 (593)
T ss_pred cccceEEEEEEEecCcceee--e-hhhhhcCcHHHhhhhhHHHHHHHHHHhh-cCeeeeeccccceEEccCCc-eeeccc
Confidence 66667999999999884432 2 2235779999999999999999999998 99999999999999999995 999999
Q ss_pred cCcccc-CCCCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCC-------CCcHHHHHHHHHHh
Q 012233 285 GSAKML-VPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPG-------ESGVDQLVEIIKIL 356 (468)
Q Consensus 285 G~a~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~-------~~~~~~~~~i~~~~ 356 (468)
|+++.- .++....++||||.|.|||++.+.. |+..+|+|+|||+++||+.|+.||.- .+.++.+.+++-.
T Consensus 396 gmcke~l~~gd~tstfcgtpnyiapeilrgee-ygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvile- 473 (593)
T KOG0695|consen 396 GMCKEGLGPGDTTSTFCGTPNYIAPEILRGEE-YGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILE- 473 (593)
T ss_pred chhhcCCCCCcccccccCCCcccchhhhcccc-cCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhh-
Confidence 999764 4566677899999999999998765 99999999999999999999999952 3445556655431
Q ss_pred CCCCHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCC------CHHHHhCCCCCCCC
Q 012233 357 GTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRC------TALEACAHPFFDDL 426 (468)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~------s~~ell~hp~f~~~ 426 (468)
.++. ++..++-.+..+++..|.+||.+|. ...++..|+||+.+
T Consensus 474 ---------------kqir------------iprslsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~i 522 (593)
T KOG0695|consen 474 ---------------KQIR------------IPRSLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSI 522 (593)
T ss_pred ---------------hccc------------ccceeehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhhC
Confidence 1112 3345777889999999999999997 47899999999965
No 313
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=3.5e-38 Score=306.47 Aligned_cols=249 Identities=23% Similarity=0.346 Sum_probs=192.4
Q ss_pred ccceEEeceecccCceEEEEEEEcCCC-----CEEEEEEeeccc-----chHHHHHHHHHHc-CCCCcccccceeeecCC
Q 012233 136 TISYMAERVVGTGSFGVVFQAKCLETG-----DSVAIKKVLQDK-----RYKNRELQIMRLL-NHPNVVSLKHCFFSTTE 204 (468)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~~~~g-----~~vaiK~~~~~~-----~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~ 204 (468)
..+|.+.+.||+|+||.||++.+...+ ..+|+|.+.... ....+|+.+++.+ +|+||+++++++
T Consensus 11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~----- 85 (293)
T cd05053 11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVC----- 85 (293)
T ss_pred HhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEE-----
Confidence 346999999999999999999976433 679999886432 2245799999999 799999999987
Q ss_pred CCceEEEEEeecccchHHH-HHhhhh------------hcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCee
Q 012233 205 KDELYLNLVLEYISETVYR-VSKHYT------------RMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLL 271 (468)
Q Consensus 205 ~~~~~~~lv~e~~~~~ll~-~~~~~~------------~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NIL 271 (468)
.....+++||||+.++.+. .+.... .....+++..+..++.||+.||.|||+ .||+||||||+|||
T Consensus 86 ~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~-~~ivH~dlkp~Nil 164 (293)
T cd05053 86 TQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLAS-KKCIHRDLAARNVL 164 (293)
T ss_pred cCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHH-CCccccccceeeEE
Confidence 3344589999999865443 332211 234568889999999999999999998 89999999999999
Q ss_pred ecCCCCcEEEeeecCccccCCCCC---CccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHH
Q 012233 272 VNPHTHQLKICDFGSAKMLVPGEP---NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVD 347 (468)
Q Consensus 272 l~~~~~~vkL~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~ 347 (468)
++.++ .+||+|||+++....... .....++..|+|||++.+. .++.++|||||||++|||++ |..||.+....+
T Consensus 165 ~~~~~-~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~ 242 (293)
T cd05053 165 VTEDH-VMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDR-VYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE 242 (293)
T ss_pred EcCCC-eEEeCccccccccccccceeccCCCCCCccccCHHHhccC-CcCcccceeehhhHHHHHhcCCCCCCCCCCHHH
Confidence 99887 799999999986543221 1122345679999998654 48999999999999999997 999998766554
Q ss_pred HHHHHHHHhCCCCHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCC
Q 012233 348 QLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAH 420 (468)
Q Consensus 348 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~h 420 (468)
....+.... .. ..+...+.++.+||.+||..||.+|||+.+++++
T Consensus 243 ~~~~~~~~~----------------~~------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~ 287 (293)
T cd05053 243 LFKLLKEGY----------------RM------------EKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVED 287 (293)
T ss_pred HHHHHHcCC----------------cC------------CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 443322100 00 0223468899999999999999999999999873
No 314
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=4.7e-38 Score=304.94 Aligned_cols=256 Identities=30% Similarity=0.477 Sum_probs=196.1
Q ss_pred ceEEeceecccCceEEEEEEEc---CCCCEEEEEEeeccc--------chHHHHHHHHHHc-CCCCcccccceeeecCCC
Q 012233 138 SYMAERVVGTGSFGVVFQAKCL---ETGDSVAIKKVLQDK--------RYKNRELQIMRLL-NHPNVVSLKHCFFSTTEK 205 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~---~~g~~vaiK~~~~~~--------~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~ 205 (468)
+|.+.+.||+|+||.||++.+. .++..||||.+.+.. ....+|+.+++.+ +||||+++++++ .
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~-----~ 75 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAF-----Q 75 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheee-----e
Confidence 3889999999999999999864 467889999886421 2245699999999 599999999887 4
Q ss_pred CceEEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeec
Q 012233 206 DELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFG 285 (468)
Q Consensus 206 ~~~~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG 285 (468)
....+|+||||+.++.+.... .....+++..++.++.|++.||.|||+ .|++|+||||.||+++.++ .++|+|||
T Consensus 76 ~~~~~~lv~e~~~~~~L~~~~---~~~~~~~~~~~~~~~~ql~~~l~~lH~-~~~~H~dl~p~nil~~~~~-~~~l~dfg 150 (288)
T cd05583 76 TDTKLHLILDYVNGGELFTHL---YQREHFTESEVRVYIAEIVLALDHLHQ-LGIIYRDIKLENILLDSEG-HVVLTDFG 150 (288)
T ss_pred cCCEEEEEEecCCCCcHHHHH---hhcCCcCHHHHHHHHHHHHHHHHHHHH-CCeeccCCCHHHeEECCCC-CEEEEECc
Confidence 444688999999876443221 123568889999999999999999998 8999999999999999887 79999999
Q ss_pred CccccCCCCC--CccccccCCccccccccCCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHH
Q 012233 286 SAKMLVPGEP--NISYICSRYYRAPELIFGAT-EYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTRE 362 (468)
Q Consensus 286 ~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~-~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~ 362 (468)
++........ .....|+..|+|||.+.+.. ..+.++|+||||+++|+|++|..||...........+.+....
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~---- 226 (288)
T cd05583 151 LSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILK---- 226 (288)
T ss_pred cccccccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHc----
Confidence 9876543322 22346789999999986532 3678999999999999999999999654322222222111000
Q ss_pred HHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCC---HHHHhCCCCCCCCCC
Q 012233 363 EIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCT---ALEACAHPFFDDLRD 428 (468)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s---~~ell~hp~f~~~~~ 428 (468)
.. ...+..++..+.++|.+||+.||++||| +.++|+||||+.+..
T Consensus 227 ---------~~------------~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~~~~ 274 (288)
T cd05583 227 ---------SK------------PPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQGIDW 274 (288)
T ss_pred ---------cC------------CCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCcccccCCH
Confidence 00 0122347889999999999999999998 567899999998753
No 315
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=1.1e-37 Score=298.36 Aligned_cols=248 Identities=30% Similarity=0.502 Sum_probs=194.9
Q ss_pred cceEEeceecccCceEEEEEEEcCCCCEEEEEEeecc-------cchHHHHHHHHHHcCCCCcccccceeeecCCCCceE
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD-------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELY 209 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~-------~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~ 209 (468)
++|.+.+.||+|+||.||+|.+..+|+.||+|.+... .....+|+++++.++|+||+++++++. ....
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~-----~~~~ 76 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFI-----ENNE 76 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeee-----cCCe
Confidence 4699999999999999999999989999999987421 234457999999999999999999984 3446
Q ss_pred EEEEeecccch-HHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCcc
Q 012233 210 LNLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAK 288 (468)
Q Consensus 210 ~~lv~e~~~~~-ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~ 288 (468)
.++||||++++ +...+.........++...+..++.||+.||.|||+ .||+|+||||+||+++.++ .++|+|||++.
T Consensus 77 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~-~~i~h~dl~p~nil~~~~~-~~~l~d~~~~~ 154 (267)
T cd08224 77 LNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHS-KRIMHRDIKPANVFITATG-VVKLGDLGLGR 154 (267)
T ss_pred EEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHh-CCEecCCcChhhEEECCCC-cEEEeccceee
Confidence 88999999864 444444333345568899999999999999999998 8999999999999999888 79999999987
Q ss_pred ccCCCC-CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcH--HHHHHHHHHhCCCCHHHHh
Q 012233 289 MLVPGE-PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGV--DQLVEIIKILGTPTREEIK 365 (468)
Q Consensus 289 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~--~~~~~i~~~~~~~~~~~~~ 365 (468)
...... ......+++.|+|||.+.+. .++.++|+|||||++|+|++|..||...... +....+...
T Consensus 155 ~~~~~~~~~~~~~~~~~y~apE~~~~~-~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~---------- 223 (267)
T cd08224 155 FFSSKTTAAHSLVGTPYYMSPERIHEN-GYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKC---------- 223 (267)
T ss_pred eccCCCcccceecCCccccCHHHhccC-CCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcC----------
Confidence 653322 22345688999999998654 4899999999999999999999999654311 111111110
Q ss_pred hcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 366 CMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
.++. .....++.++.++|.+||..+|.+|||+.+++.
T Consensus 224 ---------~~~~--------~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~ 260 (267)
T cd08224 224 ---------DYPP--------LPADHYSEELRDLVSRCINPDPEKRPDISYVLQ 260 (267)
T ss_pred ---------CCCC--------CChhhcCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 0000 011246789999999999999999999999875
No 316
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=7.8e-38 Score=305.75 Aligned_cols=250 Identities=24% Similarity=0.337 Sum_probs=192.7
Q ss_pred CcccceEEeceecccCceEEEEEEE-----cCCCCEEEEEEeeccc-----chHHHHHHHHHHc-CCCCcccccceeeec
Q 012233 134 KQTISYMAERVVGTGSFGVVFQAKC-----LETGDSVAIKKVLQDK-----RYKNRELQIMRLL-NHPNVVSLKHCFFST 202 (468)
Q Consensus 134 ~~~~~y~~~~~lG~G~fg~Vy~~~~-----~~~g~~vaiK~~~~~~-----~~~~~E~~il~~l-~hpnIv~l~~~~~~~ 202 (468)
...++|.+.+.||+|+||.||+|.+ ..++..||+|.+.... ....+|+.+++++ +||||+++++++.
T Consensus 32 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~-- 109 (302)
T cd05055 32 FPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACT-- 109 (302)
T ss_pred ccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEe--
Confidence 3345799999999999999999985 2345689999876432 2345799999999 7999999999883
Q ss_pred CCCCceEEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEe
Q 012233 203 TEKDELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKIC 282 (468)
Q Consensus 203 ~~~~~~~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~ 282 (468)
....+++||||+.++.+...... .....+++..+..++.||+.||.|||+ +||+|+||||+|||++.++ .++|+
T Consensus 110 ---~~~~~~lv~e~~~~~~L~~~i~~-~~~~~l~~~~~~~i~~~i~~~l~~lH~-~~ivH~dlkp~Nil~~~~~-~~~l~ 183 (302)
T cd05055 110 ---IGGPILVITEYCCYGDLLNFLRR-KRESFLTLEDLLSFSYQVAKGMAFLAS-KNCIHRDLAARNVLLTHGK-IVKIC 183 (302)
T ss_pred ---cCCceEEEEEcCCCCcHHHHHHh-CCCCCCCHHHHHHHHHHHHHHHHHHHH-CCeehhhhccceEEEcCCC-eEEEC
Confidence 33458999999986544322221 112348999999999999999999998 8999999999999999777 79999
Q ss_pred eecCccccCCCCC---CccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCC
Q 012233 283 DFGSAKMLVPGEP---NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGT 358 (468)
Q Consensus 283 DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~ 358 (468)
|||+++....... .....++..|+|||.+.+.. ++.++|||||||++|+|++ |..||......+.+.+.+...
T Consensus 184 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~-- 260 (302)
T cd05055 184 DFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCV-YTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEG-- 260 (302)
T ss_pred CCcccccccCCCceeecCCCCcccccCCHhhhccCC-CCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcC--
Confidence 9999976543221 11234567899999986654 8999999999999999998 999998766555444433310
Q ss_pred CCHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 359 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
+. ...+..+++++.+||.+||+.+|.+|||+.+++.
T Consensus 261 ---------------~~----------~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~ 296 (302)
T cd05055 261 ---------------YR----------MAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQ 296 (302)
T ss_pred ---------------Cc----------CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 00 0012346889999999999999999999999875
No 317
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=5e-38 Score=303.93 Aligned_cols=257 Identities=26% Similarity=0.337 Sum_probs=188.6
Q ss_pred eEEeceecccCceEEEEEEE----cCCCCEEEEEEeeccc-----chHHHHHHHHHHcCCCCcccccceeeecCCCCceE
Q 012233 139 YMAERVVGTGSFGVVFQAKC----LETGDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELY 209 (468)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~~----~~~g~~vaiK~~~~~~-----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~ 209 (468)
|.+.+.||+|+||+||++.. ..++..||+|.+.... ..+.+|+++++.++||||+++++++.. .....
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~~~~ 82 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSE---QGGKG 82 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEec---CCCce
Confidence 48899999999999988653 3568899999886432 234579999999999999999987643 22346
Q ss_pred EEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccc
Q 012233 210 LNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (468)
Q Consensus 210 ~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~ 289 (468)
+++||||+.++.+..... ...+++..++.++.|++.||.|||+ +||+||||||+|||++.++ .++|+|||+++.
T Consensus 83 ~~lv~e~~~~~~l~~~~~----~~~l~~~~~~~i~~~l~~~l~~lH~-~~i~H~dlkp~Nili~~~~-~~~l~dfg~~~~ 156 (283)
T cd05080 83 LQLIMEYVPLGSLRDYLP----KHKLNLAQLLLFAQQICEGMAYLHS-QHYIHRDLAARNVLLDNDR-LVKIGDFGLAKA 156 (283)
T ss_pred EEEEecCCCCCCHHHHHH----HcCCCHHHHHHHHHHHHHHHHHHHH-CCeeccccChheEEEcCCC-cEEEeecccccc
Confidence 889999999765543322 2458999999999999999999998 8999999999999999887 799999999976
Q ss_pred cCCCCC----CccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHh-CCCCHHHH
Q 012233 290 LVPGEP----NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKIL-GTPTREEI 364 (468)
Q Consensus 290 ~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~-~~~~~~~~ 364 (468)
...... .....++..|+|||.+.+. .++.++|||||||++|+|++|..||...... +....... +.......
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~~-~~~~~~Di~slG~~l~el~tg~~p~~~~~~~--~~~~~~~~~~~~~~~~~ 233 (283)
T cd05080 157 VPEGHEYYRVREDGDSPVFWYAVECLKEN-KFSYASDVWSFGVTLYELLTHCDSKQSPPKK--FEEMIGPKQGQMTVVRL 233 (283)
T ss_pred cCCcchhhccCCCCCCCceeeCHhHhccc-CCCcccccHHHHHHHHHHHhCCCCCCCCcch--hhhhhcccccccchhhh
Confidence 643322 1123456779999998654 4899999999999999999999998654321 11111100 00000000
Q ss_pred hhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 365 KCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
. ...........+..++.++.+++.+||+.||++|||+.+++.
T Consensus 234 ~------------~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~ 276 (283)
T cd05080 234 I------------ELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIP 276 (283)
T ss_pred h------------hhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 0 000000011123457889999999999999999999999985
No 318
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=9.1e-38 Score=298.82 Aligned_cols=243 Identities=26% Similarity=0.349 Sum_probs=189.7
Q ss_pred cceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc---chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEEE
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK---RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLV 213 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~---~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv 213 (468)
.+|.+.+.||+|+||.||+|.+..+ ..||+|++.... ....+|+.+++.++||||+++++.+. . .+.++|
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-----~-~~~~lv 78 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-----E-EPIYIV 78 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCccCHHHHHHHHHHHHhCCCCCcceEEEEEC-----C-CCcEEE
Confidence 3599999999999999999998655 469999886532 23567999999999999999988652 1 236799
Q ss_pred eecccchH-HHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCC
Q 012233 214 LEYISETV-YRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP 292 (468)
Q Consensus 214 ~e~~~~~l-l~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~ 292 (468)
|||++++. .+.+... ....+++..+..++.|++.||.|||+ .||+|+||||+||+++.++ .++|+|||.+.....
T Consensus 79 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~aL~~lH~-~~i~H~dl~p~Nill~~~~-~~~L~dfg~~~~~~~ 154 (262)
T cd05071 79 TEYMSKGSLLDFLKGE--MGKYLRLPQLVDMAAQIASGMAYVER-MNYVHRDLRAANILVGENL-VCKVADFGLARLIED 154 (262)
T ss_pred EEcCCCCcHHHHHhhc--cccCCCHHHHHHHHHHHHHHHHHHHH-CCccccccCcccEEEcCCC-cEEeccCCceeeccc
Confidence 99998654 4433221 23457888999999999999999998 8999999999999999887 799999999976543
Q ss_pred CCCC--ccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCC
Q 012233 293 GEPN--ISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP 369 (468)
Q Consensus 293 ~~~~--~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 369 (468)
.... ....++..|+|||++.+. .++.++|||||||++|+|++ |..||.+....+.+..+....
T Consensus 155 ~~~~~~~~~~~~~~y~~PE~~~~~-~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~------------- 220 (262)
T cd05071 155 NEYTARQGAKFPIKWTAPEAALYG-RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY------------- 220 (262)
T ss_pred cccccccCCcccceecCHhHhccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCC-------------
Confidence 3221 123456789999988654 48999999999999999999 899998776555444332210
Q ss_pred CCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 370 NYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
..+ ....++..+.+||.+||+.||.+||++.+++.
T Consensus 221 -----~~~----------~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~ 255 (262)
T cd05071 221 -----RMP----------CPPECPESLHDLMCQCWRKEPEERPTFEYLQA 255 (262)
T ss_pred -----CCC----------CccccCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 000 12347889999999999999999999999875
No 319
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=6.4e-38 Score=304.57 Aligned_cols=247 Identities=23% Similarity=0.324 Sum_probs=192.2
Q ss_pred cceEEeceecccCceEEEEEEEc-----CCCCEEEEEEeeccc----chHHHHHHHHHHcCCCCcccccceeeecCCCCc
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCL-----ETGDSVAIKKVLQDK----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDE 207 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~-----~~g~~vaiK~~~~~~----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 207 (468)
.+|.+.+.||+|+||.||+|.+. .++..+++|.+.... ..+.+|+.+++.++|+||+++++++ ...
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~ 79 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVC-----GDG 79 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEE-----ccC
Confidence 35999999999999999999864 245668999875442 3456799999999999999999988 344
Q ss_pred eEEEEEeecccchHHH-HHhhhh------------hcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecC
Q 012233 208 LYLNLVLEYISETVYR-VSKHYT------------RMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNP 274 (468)
Q Consensus 208 ~~~~lv~e~~~~~ll~-~~~~~~------------~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~ 274 (468)
.+.++||||++++.+. .+.... .....+++..++.++.||+.||.|||+ +||+||||||+|||++.
T Consensus 80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~-~~i~H~dlkp~Nil~~~ 158 (291)
T cd05094 80 DPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLAS-QHFVHRDLATRNCLVGA 158 (291)
T ss_pred CceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHh-CCeeecccCcceEEEcc
Confidence 4588999999865443 332211 112457889999999999999999998 89999999999999998
Q ss_pred CCCcEEEeeecCccccCCCC---CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHHH
Q 012233 275 HTHQLKICDFGSAKMLVPGE---PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLV 350 (468)
Q Consensus 275 ~~~~vkL~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~~ 350 (468)
++ .++|+|||++....... ......++..|+|||.+.+. .++.++|||||||++|||++ |..||...+..+.+.
T Consensus 159 ~~-~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~ 236 (291)
T cd05094 159 NL-LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYR-KFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIE 236 (291)
T ss_pred CC-cEEECCCCcccccCCCceeecCCCCCcceeecChHHhccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence 87 79999999997653322 12234567889999998664 48999999999999999998 999998766554433
Q ss_pred HHHHHhCCCCHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 351 EIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 351 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
.+... ..+ ..+...+..+.+||.+||+.||.+||++.++++
T Consensus 237 ~~~~~-------------------~~~---------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~ 277 (291)
T cd05094 237 CITQG-------------------RVL---------ERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYK 277 (291)
T ss_pred HHhCC-------------------CCC---------CCCccCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence 32210 000 012346789999999999999999999999876
No 320
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=6.3e-38 Score=298.90 Aligned_cols=236 Identities=25% Similarity=0.319 Sum_probs=183.5
Q ss_pred eecccCceEEEEEEE--cCCCCEEEEEEeeccc------chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEEEee
Q 012233 144 VVGTGSFGVVFQAKC--LETGDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVLE 215 (468)
Q Consensus 144 ~lG~G~fg~Vy~~~~--~~~g~~vaiK~~~~~~------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv~e 215 (468)
.||+|+||.||+|.+ ..++..+|+|++.... ..+.+|+.+++.+.||||+++++++ .+. ..++|||
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~-~~~lv~e 75 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGIC-----EAE-SWMLVME 75 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEE-----cCC-CcEEEEe
Confidence 589999999999965 4567899999875432 2345789999999999999998876 222 3579999
Q ss_pred cccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCCCCC
Q 012233 216 YISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGEP 295 (468)
Q Consensus 216 ~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~~~~ 295 (468)
|++++.+.... .....+++..+..++.|++.||.|||+ +||+||||||.|||++.++ .+||+|||++........
T Consensus 76 ~~~~~~L~~~l---~~~~~~~~~~~~~i~~qi~~al~~lH~-~~i~H~dlkp~nill~~~~-~~kl~Dfg~~~~~~~~~~ 150 (257)
T cd05116 76 LAELGPLNKFL---QKNKHVTEKNITELVHQVSMGMKYLEE-TNFVHRDLAARNVLLVTQH-YAKISDFGLSKALGADEN 150 (257)
T ss_pred cCCCCcHHHHH---HhcCCCCHHHHHHHHHHHHHHHHHHHH-CCEeecccchhhEEEcCCC-eEEECCCccccccCCCCC
Confidence 99976443222 223568899999999999999999998 8999999999999999887 799999999976643322
Q ss_pred ----CccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCC
Q 012233 296 ----NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPN 370 (468)
Q Consensus 296 ----~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 370 (468)
.....++..|+|||.+... .++.++|+|||||++|||++ |..||...+..+....+.+..
T Consensus 151 ~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~-------------- 215 (257)
T cd05116 151 YYKAKTHGKWPVKWYAPECMNYY-KFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGE-------------- 215 (257)
T ss_pred eeeecCCCCCCccccCHhHhccC-CcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCC--------------
Confidence 1122345789999998544 48899999999999999997 999998776554444332210
Q ss_pred CccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 371 YTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
. ..++..+++++.+||.+||+.||.+||++.+|..
T Consensus 216 --~------------~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~ 250 (257)
T cd05116 216 --R------------MECPQRCPPEMYDLMKLCWTYGVDERPGFAVVEL 250 (257)
T ss_pred --C------------CCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHH
Confidence 0 0123457899999999999999999999998753
No 321
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=4.8e-38 Score=305.26 Aligned_cols=246 Identities=23% Similarity=0.364 Sum_probs=188.4
Q ss_pred ceEEeceecccCceEEEEEEEcC-----CCCEEEEEEeeccc-----chHHHHHHHHHHcCCCCcccccceeeecCCCCc
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLE-----TGDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDE 207 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~-----~g~~vaiK~~~~~~-----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 207 (468)
+|++.+.||+|+||.||+|.+.. ....+|+|.+.... ....+|+.+++.++||||+++++.+ ...
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~ 75 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGAC-----SQD 75 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEE-----ecC
Confidence 37888999999999999998743 23568888875432 2345799999999999999999987 333
Q ss_pred eEEEEEeecccchHHHHH-hhhh--------------------hcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCC
Q 012233 208 LYLNLVLEYISETVYRVS-KHYT--------------------RMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIK 266 (468)
Q Consensus 208 ~~~~lv~e~~~~~ll~~~-~~~~--------------------~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlk 266 (468)
...++||||+.++.+... .... .....+++..+..++.|++.||.|||+ .||+|||||
T Consensus 76 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~ivH~dik 154 (290)
T cd05045 76 GPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAE-MKLVHRDLA 154 (290)
T ss_pred CCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHH-CCeehhhhh
Confidence 457899999996655432 2110 112457888899999999999999998 899999999
Q ss_pred CCCeeecCCCCcEEEeeecCccccCCCCC---CccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCC
Q 012233 267 PQNLLVNPHTHQLKICDFGSAKMLVPGEP---NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPG 342 (468)
Q Consensus 267 p~NILl~~~~~~vkL~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~ 342 (468)
|+|||++.++ .+||+|||+++....... .....++..|+|||.+.+. .++.++|||||||++|+|++ |..||.+
T Consensus 155 p~nill~~~~-~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~-~~~~~~Di~slG~~l~el~t~g~~p~~~ 232 (290)
T cd05045 155 ARNVLVAEGR-KMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDH-IYTTQSDVWSFGVLLWEIVTLGGNPYPG 232 (290)
T ss_pred hheEEEcCCC-cEEeccccccccccCccchhcccCCCCCccccCHHHHccC-CcchHhHHHHHHHHHHHHHhcCCCCCCC
Confidence 9999999877 799999999976533221 1223456789999998654 48999999999999999998 9999987
Q ss_pred CCcHHHHHHHHHHhCCCCHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 343 ESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 343 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
....+....+... +.. ..+..++.++.+||.+||+.||.+||++.+++.
T Consensus 233 ~~~~~~~~~~~~~------------------~~~----------~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~ 281 (290)
T cd05045 233 IAPERLFNLLKTG------------------YRM----------ERPENCSEEMYNLMLTCWKQEPDKRPTFADISK 281 (290)
T ss_pred CCHHHHHHHHhCC------------------CCC----------CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 6544433222110 000 122457889999999999999999999999875
No 322
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=6e-38 Score=307.23 Aligned_cols=248 Identities=23% Similarity=0.346 Sum_probs=189.3
Q ss_pred ccceEEeceecccCceEEEEEEEcC-------CCCEEEEEEeeccc-----chHHHHHHHHHHc-CCCCcccccceeeec
Q 012233 136 TISYMAERVVGTGSFGVVFQAKCLE-------TGDSVAIKKVLQDK-----RYKNRELQIMRLL-NHPNVVSLKHCFFST 202 (468)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~~~-------~g~~vaiK~~~~~~-----~~~~~E~~il~~l-~hpnIv~l~~~~~~~ 202 (468)
.++|.+.+.||+|+||.||+|.+.. ++..+|+|.+.... ....+|+.+++.+ +||||+++++++
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~--- 93 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGAC--- 93 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEE---
Confidence 3579999999999999999998643 23579999886432 1344689999999 799999999988
Q ss_pred CCCCceEEEEEeecccch-HHHHHhhhhh------------cCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCC
Q 012233 203 TEKDELYLNLVLEYISET-VYRVSKHYTR------------MNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQN 269 (468)
Q Consensus 203 ~~~~~~~~~lv~e~~~~~-ll~~~~~~~~------------~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~N 269 (468)
......|+||||++++ +...+..... ....+++..+..++.||+.||+|||+ +|++||||||+|
T Consensus 94 --~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~-~gi~H~dlkp~N 170 (307)
T cd05098 94 --TQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLAS-KKCIHRDLAARN 170 (307)
T ss_pred --ecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHH-CCcccccccHHh
Confidence 3344588999999865 4444432211 12357888999999999999999998 899999999999
Q ss_pred eeecCCCCcEEEeeecCccccCCCCC---CccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCc
Q 012233 270 LLVNPHTHQLKICDFGSAKMLVPGEP---NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESG 345 (468)
Q Consensus 270 ILl~~~~~~vkL~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~ 345 (468)
||++.++ .+||+|||++........ .....+++.|+|||.+.+.. ++.++|||||||++|+|++ |..||.+...
T Consensus 171 ill~~~~-~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~DvwslG~~l~el~~~g~~p~~~~~~ 248 (307)
T cd05098 171 VLVTEDN-VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRI-YTHQSDVWSFGVLLWEIFTLGGSPYPGVPV 248 (307)
T ss_pred eEEcCCC-cEEECCCcccccccccchhhccccCCCccceeChHHhccCC-CCcHHHHHHHHHHHHHHHcCCCCCCCcCCH
Confidence 9999887 799999999876532211 11223456899999987654 8999999999999999998 8899976554
Q ss_pred HHHHHHHHHHhCCCCHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 346 VDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 346 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
.+ +...+.... ...++..++.++++||.+||..+|.+||++.+++.
T Consensus 249 ~~-~~~~~~~~~---------------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~ 294 (307)
T cd05098 249 EE-LFKLLKEGH---------------------------RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 294 (307)
T ss_pred HH-HHHHHHcCC---------------------------CCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence 33 332222100 00123457889999999999999999999999976
No 323
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-39 Score=310.57 Aligned_cols=260 Identities=27% Similarity=0.426 Sum_probs=208.1
Q ss_pred CCcccceEEeceecccCceEEEEEEEcCCCCEEEEEEeecccc-----------hHHHHHHHHHHcCCCCcccccceeee
Q 012233 133 PKQTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKR-----------YKNRELQIMRLLNHPNVVSLKHCFFS 201 (468)
Q Consensus 133 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~~-----------~~~~E~~il~~l~hpnIv~l~~~~~~ 201 (468)
+...++|.++++||+|||+.||+|.+....+.||||+-...+. ..-+|..|-+.|+||.||++|++|..
T Consensus 459 ptLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfsl 538 (775)
T KOG1151|consen 459 PTLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSL 538 (775)
T ss_pred cchHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeee
Confidence 3444579999999999999999999999999999997532211 12269999999999999999999854
Q ss_pred cCCCCceEEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhc-CCccccCCCCCCeeecCCC--Cc
Q 012233 202 TTEKDELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHV-VGVCHRDIKPQNLLVNPHT--HQ 278 (468)
Q Consensus 202 ~~~~~~~~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~-~givHrDlkp~NILl~~~~--~~ 278 (468)
.++ .+|-|+|||+|.-|++ +.+.++.+++.+++.|+.||+.||.||.+. ..|||-||||.|||+.... +.
T Consensus 539 Dtd----sFCTVLEYceGNDLDF---YLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGe 611 (775)
T KOG1151|consen 539 DTD----SFCTVLEYCEGNDLDF---YLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGE 611 (775)
T ss_pred ccc----cceeeeeecCCCchhH---HHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccce
Confidence 433 4789999999986664 455577899999999999999999999862 3699999999999985432 26
Q ss_pred EEEeeecCccccCCCCCC--------ccccccCCccccccccC---CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHH
Q 012233 279 LKICDFGSAKMLVPGEPN--------ISYICSRYYRAPELIFG---ATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVD 347 (468)
Q Consensus 279 vkL~DFG~a~~~~~~~~~--------~~~~gt~~y~aPE~~~~---~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~ 347 (468)
+||+|||+++.+..+... ....||.+|++||.+.- .+..+.++||||+|||+|+.+.|+.||.......
T Consensus 612 IKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQ 691 (775)
T KOG1151|consen 612 IKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQ 691 (775)
T ss_pred eEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHH
Confidence 999999999988654322 24678999999999843 3457889999999999999999999997654333
Q ss_pred HHHH---HHHHhCCCCHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCC
Q 012233 348 QLVE---IIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFD 424 (468)
Q Consensus 348 ~~~~---i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~ 424 (468)
.+.+ |++ ..++.||.. +.++.++++||++||++--+.|+...++..||||.
T Consensus 692 dILqeNTIlk----------------AtEVqFP~K----------PvVsseAkaFIRRCLaYRKeDR~DV~qLA~dpyll 745 (775)
T KOG1151|consen 692 DILQENTILK----------------ATEVQFPPK----------PVVSSEAKAFIRRCLAYRKEDRIDVQQLACDPYLL 745 (775)
T ss_pred HHHhhhchhc----------------ceeccCCCC----------CccCHHHHHHHHHHHHhhhhhhhhHHHHccCcccc
Confidence 2221 222 145566642 34899999999999999999999999999999997
Q ss_pred C
Q 012233 425 D 425 (468)
Q Consensus 425 ~ 425 (468)
.
T Consensus 746 P 746 (775)
T KOG1151|consen 746 P 746 (775)
T ss_pred c
Confidence 5
No 324
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=5.8e-38 Score=305.26 Aligned_cols=254 Identities=19% Similarity=0.231 Sum_probs=192.4
Q ss_pred cceEEeceecccCceEEEEEEEcCCC----------------CEEEEEEeeccc-----chHHHHHHHHHHcCCCCcccc
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLETG----------------DSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSL 195 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g----------------~~vaiK~~~~~~-----~~~~~E~~il~~l~hpnIv~l 195 (468)
.+|++.+.||+|+||.||+|.+...+ ..||+|.+.... ....+|+.+++.++||||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~ 84 (296)
T cd05051 5 QPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARL 84 (296)
T ss_pred hhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence 36999999999999999999876543 457999886542 234579999999999999999
Q ss_pred cceeeecCCCCceEEEEEeecccchHH-HHHhhhh-------hcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCC
Q 012233 196 KHCFFSTTEKDELYLNLVLEYISETVY-RVSKHYT-------RMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKP 267 (468)
Q Consensus 196 ~~~~~~~~~~~~~~~~lv~e~~~~~ll-~~~~~~~-------~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp 267 (468)
++++. .....++||||+.++.+ ..+.... .....+++..++.++.|++.||.|||+ +||+|+||||
T Consensus 85 ~~~~~-----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~-~~i~H~dlkp 158 (296)
T cd05051 85 LGVCT-----VDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLES-LNFVHRDLAT 158 (296)
T ss_pred EEEEe-----cCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHH-cCccccccch
Confidence 99883 33468899999986544 3332221 112368899999999999999999998 8999999999
Q ss_pred CCeeecCCCCcEEEeeecCccccCCCC---CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh--CCCCCCC
Q 012233 268 QNLLVNPHTHQLKICDFGSAKMLVPGE---PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL--GQPLFPG 342 (468)
Q Consensus 268 ~NILl~~~~~~vkL~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~--G~~pf~~ 342 (468)
+|||++.++ .++|+|||++....... ......+++.|+|||.+.+. .++.++|||||||++|||++ |..||..
T Consensus 159 ~Nili~~~~-~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~~~~~~p~~~ 236 (296)
T cd05051 159 RNCLVGKNY-TIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLG-KFTTKSDVWAFGVTLWEILTLCREQPYEH 236 (296)
T ss_pred hceeecCCC-ceEEccccceeecccCcceeecCcCCCCceecCHHHhhcC-CCCccchhhhhHHHHHHHHhcCCCCCCCC
Confidence 999999887 79999999987653322 12234557789999998654 48999999999999999998 7788877
Q ss_pred CCcHHHHHHHHHHhCCCCHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 343 ESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 343 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
.+..+.+..+........ .... ...+..++.++.+||.+||+.||.+|||+.+++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~-----------~~~~----------~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~ 292 (296)
T cd05051 237 LTDQQVIENAGHFFRDDG-----------RQIY----------LPRPPNCPKDIYELMLECWRRDEEDRPTFREIHL 292 (296)
T ss_pred cChHHHHHHHHhcccccc-----------cccc----------CCCccCCCHHHHHHHHHHhccChhcCCCHHHHHH
Confidence 665555444433111000 0000 0122346789999999999999999999999965
No 325
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=8.2e-38 Score=301.80 Aligned_cols=243 Identities=21% Similarity=0.319 Sum_probs=188.5
Q ss_pred cceEEeceecccCceEEEEEEEcCCCC----EEEEEEeeccc-----chHHHHHHHHHHcCCCCcccccceeeecCCCCc
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLETGD----SVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDE 207 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~----~vaiK~~~~~~-----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 207 (468)
.+|++.+.||+|+||+||+|.+..+|. .||+|.+.... ....+|+.+++.+.||||+++++++.. .
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-----~ 81 (279)
T cd05109 7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-----S 81 (279)
T ss_pred hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-----C
Confidence 469999999999999999999877776 48999875432 234568899999999999999988742 1
Q ss_pred eEEEEEeecccch-HHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecC
Q 012233 208 LYLNLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGS 286 (468)
Q Consensus 208 ~~~~lv~e~~~~~-ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~ 286 (468)
..+++|||++++ +++.+. .....+++..+..++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||+
T Consensus 82 -~~~l~~~~~~~g~l~~~l~---~~~~~~~~~~~~~~~~qi~~~L~~lH~-~~iiH~dlkp~Nil~~~~~-~~kL~dfG~ 155 (279)
T cd05109 82 -TVQLVTQLMPYGCLLDYVR---ENKDRIGSQDLLNWCVQIAKGMSYLEE-VRLVHRDLAARNVLVKSPN-HVKITDFGL 155 (279)
T ss_pred -CcEEEEEcCCCCCHHHHHh---hccCCCCHHHHHHHHHHHHHHHHHHHH-CCeeccccccceEEEcCCC-cEEECCCCc
Confidence 256899999865 443332 223568999999999999999999998 8999999999999998877 799999999
Q ss_pred ccccCCCCCCc---cccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHH
Q 012233 287 AKMLVPGEPNI---SYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTRE 362 (468)
Q Consensus 287 a~~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~ 362 (468)
++......... ...+++.|+|||.+.+. .++.++|||||||++|||++ |..||........ ...+.....+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~-~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~-~~~~~~~~~~--- 230 (279)
T cd05109 156 ARLLDIDETEYHADGGKVPIKWMALESILHR-RFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREI-PDLLEKGERL--- 230 (279)
T ss_pred eeecccccceeecCCCccchhhCCHHHhccC-CCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHH-HHHHHCCCcC---
Confidence 98764332211 22346789999998655 48999999999999999998 9999976554333 2222211000
Q ss_pred HHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 363 EIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
+ .+..++.++.++|.+||..||..||++.+++.
T Consensus 231 --------------~----------~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~ 263 (279)
T cd05109 231 --------------P----------QPPICTIDVYMIMVKCWMIDSECRPRFRELVD 263 (279)
T ss_pred --------------C----------CCccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 0 12346889999999999999999999999984
No 326
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=5.8e-38 Score=312.22 Aligned_cols=250 Identities=25% Similarity=0.351 Sum_probs=189.1
Q ss_pred cceEEeceecccCceEEEEEEE-----cCCCCEEEEEEeeccc-----chHHHHHHHHHHc-CCCCcccccceeeecCCC
Q 012233 137 ISYMAERVVGTGSFGVVFQAKC-----LETGDSVAIKKVLQDK-----RYKNRELQIMRLL-NHPNVVSLKHCFFSTTEK 205 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~-----~~~g~~vaiK~~~~~~-----~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~ 205 (468)
++|++.+.||+|+||.||+|.+ ..+++.||||++.... ....+|+.++..+ +||||+++++++...
T Consensus 7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~--- 83 (343)
T cd05103 7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP--- 83 (343)
T ss_pred hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecC---
Confidence 4699999999999999999985 3467889999986432 2345799999999 689999999977432
Q ss_pred CceEEEEEeecccchHHHHHhhhhh-------------------------------------------------------
Q 012233 206 DELYLNLVLEYISETVYRVSKHYTR------------------------------------------------------- 230 (468)
Q Consensus 206 ~~~~~~lv~e~~~~~ll~~~~~~~~------------------------------------------------------- 230 (468)
...+++|||||.++.+........
T Consensus 84 -~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (343)
T cd05103 84 -GGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVE 162 (343)
T ss_pred -CCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccch
Confidence 235789999999765543221110
Q ss_pred ---------cCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCCCCC---Ccc
Q 012233 231 ---------MNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGEP---NIS 298 (468)
Q Consensus 231 ---------~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~~~~---~~~ 298 (468)
....+++..+..++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||++........ ...
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~-~~i~H~dikp~Nil~~~~~-~~kl~dfg~~~~~~~~~~~~~~~~ 240 (343)
T cd05103 163 EEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLAS-RKCIHRDLAARNILLSENN-VVKICDFGLARDIYKDPDYVRKGD 240 (343)
T ss_pred hhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCccCeEEEcCCC-cEEEEecccccccccCcchhhcCC
Confidence 01246778888999999999999998 8999999999999999887 799999999876532221 112
Q ss_pred ccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCCccCCCC
Q 012233 299 YICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFP 377 (468)
Q Consensus 299 ~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (468)
..++..|+|||.+.+. .++.++|||||||++|+|++ |..||........+...+.... ...
T Consensus 241 ~~~~~~y~aPE~~~~~-~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~---------------~~~-- 302 (343)
T cd05103 241 ARLPLKWMAPETIFDR-VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT---------------RMR-- 302 (343)
T ss_pred CCCCcceECcHHhcCC-CCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccC---------------CCC--
Confidence 3346779999998654 48999999999999999996 9999987654433333222100 000
Q ss_pred cccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCC
Q 012233 378 QIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAH 420 (468)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~h 420 (468)
.+..+++++.+++.+||+.||.+|||+.++++|
T Consensus 303 ----------~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~ 335 (343)
T cd05103 303 ----------APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 335 (343)
T ss_pred ----------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 112367889999999999999999999999875
No 327
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=1.2e-37 Score=296.77 Aligned_cols=242 Identities=23% Similarity=0.329 Sum_probs=190.4
Q ss_pred cceEEeceecccCceEEEEEEEcCCCCEEEEEEeecccc--hHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEEEe
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKR--YKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVL 214 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~~--~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv~ 214 (468)
.+|.+.+.||+|+||.||++.. .|..||+|.+..+.. .+.+|+.+++.++|+||++++++++.. ....++||
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----~~~~~lv~ 79 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEE----KGGLYIVT 79 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEE--cCCcEEEEEeCCCchHHHHHHHHHHHHhCCCCCeeeEEEEEEcC----CCceEEEE
Confidence 4699999999999999999987 588899998865432 355799999999999999999876432 23478999
Q ss_pred ecccch-HHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCCC
Q 012233 215 EYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPG 293 (468)
Q Consensus 215 e~~~~~-ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~~ 293 (468)
||++++ +.+.+.. .....+++..+..++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||++......
T Consensus 80 e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dlkp~nil~~~~~-~~kl~dfg~~~~~~~~ 155 (256)
T cd05082 80 EYMAKGSLVDYLRS--RGRSVLGGDCLLKFSLDVCEAMEYLEA-NNFVHRDLAARNVLVSEDN-VAKVSDFGLTKEASST 155 (256)
T ss_pred ECCCCCcHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHHHh-CCEeccccchheEEEcCCC-cEEecCCccceecccc
Confidence 999865 4443322 122347888999999999999999997 8999999999999999887 7999999998754322
Q ss_pred CCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCCc
Q 012233 294 EPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYT 372 (468)
Q Consensus 294 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 372 (468)
. ....++..|+|||++.+. .++.++|||||||++|+|++ |+.||......+....+....
T Consensus 156 ~--~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~---------------- 216 (256)
T cd05082 156 Q--DTGKLPVKWTAPEALREK-KFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGY---------------- 216 (256)
T ss_pred C--CCCccceeecCHHHHccC-CCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCC----------------
Confidence 2 233456789999998654 48999999999999999997 999998765444333332100
Q ss_pred cCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 373 EFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
.......+++.+.++|.+||+.||.+|||+.++++
T Consensus 217 ------------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 251 (256)
T cd05082 217 ------------KMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLRE 251 (256)
T ss_pred ------------CCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 00122457899999999999999999999999975
No 328
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=2e-38 Score=298.93 Aligned_cols=228 Identities=26% Similarity=0.336 Sum_probs=180.8
Q ss_pred cCceEEEEEEEcCCCCEEEEEEeecccchHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEEEeecccchHH-HHHh
Q 012233 148 GSFGVVFQAKCLETGDSVAIKKVLQDKRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVLEYISETVY-RVSK 226 (468)
Q Consensus 148 G~fg~Vy~~~~~~~g~~vaiK~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv~e~~~~~ll-~~~~ 226 (468)
|.||.||++.+..+++.||+|.+..... ..+|...+....||||+++++++ .+....|+||||++++.+ +.+.
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~-~~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~lv~e~~~~~~L~~~l~ 77 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSSE-YSRERLTIIPHCVPNMVCLHKYI-----VSEDSVFLVLQHAEGGKLWSHIS 77 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchhh-hhhHHHHHHhcCCCceeehhhhe-----ecCCeEEEEEecCCCCCHHHHHH
Confidence 8999999999999999999999876543 33455556667799999999988 444568999999997544 4332
Q ss_pred hhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCCCCCCccccccCCcc
Q 012233 227 HYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGEPNISYICSRYYR 306 (468)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~ 306 (468)
. ...+++..+..++.|++.||.|||+ +||+||||||+||+++.++ .++|+|||.+...... .....++..|+
T Consensus 78 ~----~~~l~~~~~~~~~~ql~~~l~~lH~-~~i~H~dlkp~Nil~~~~~-~~~l~df~~~~~~~~~--~~~~~~~~~y~ 149 (237)
T cd05576 78 K----FLNIPEECVKRWAAEMVVALDALHR-EGIVCRDLNPNNILLDDRG-HIQLTYFSRWSEVEDS--CDGEAVENMYC 149 (237)
T ss_pred H----hcCCCHHHHHHHHHHHHHHHHHHHh-CCeeccCCCHHHEEEcCCC-CEEEecccchhccccc--cccCCcCcccc
Confidence 2 3458899999999999999999998 8999999999999999888 7999999987655332 23445677899
Q ss_pred ccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCCccCCCCcccCCCccc
Q 012233 307 APELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHK 386 (468)
Q Consensus 307 aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (468)
|||.+.+. .++.++|+||+||++|||++|..||...... + . ....+
T Consensus 150 aPE~~~~~-~~~~~~DvwslG~il~el~~g~~~~~~~~~~-----~-~---------------~~~~~------------ 195 (237)
T cd05576 150 APEVGGIS-EETEACDWWSLGAILFELLTGKTLVECHPSG-----I-N---------------THTTL------------ 195 (237)
T ss_pred CCcccCCC-CCCchhhHHHHHHHHHHHHHCcchhhcCchh-----c-c---------------ccccc------------
Confidence 99988544 4889999999999999999999887532110 0 0 00001
Q ss_pred ccccCCCHHHHHHHHHhcccCCCCCCCH-----HHHhCCCCC
Q 012233 387 IFHKRMPPEALDLVSRLLQYSPSLRCTA-----LEACAHPFF 423 (468)
Q Consensus 387 ~~~~~~~~~l~~li~~~L~~dP~~R~s~-----~ell~hp~f 423 (468)
.++..+++.+++||.+||+.||.+|+++ +++++||||
T Consensus 196 ~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h~~~ 237 (237)
T cd05576 196 NIPEWVSEEARSLLQQLLQFNPTERLGAGVAGVEDIKSHPFF 237 (237)
T ss_pred CCcccCCHHHHHHHHHHccCCHHHhcCCCccchHHHHcCCCC
Confidence 1234578999999999999999999986 999999998
No 329
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=1.1e-37 Score=315.34 Aligned_cols=250 Identities=23% Similarity=0.323 Sum_probs=192.5
Q ss_pred cccceEEeceecccCceEEEEEEEc-----CCCCEEEEEEeeccc-----chHHHHHHHHHHcC-CCCcccccceeeecC
Q 012233 135 QTISYMAERVVGTGSFGVVFQAKCL-----ETGDSVAIKKVLQDK-----RYKNRELQIMRLLN-HPNVVSLKHCFFSTT 203 (468)
Q Consensus 135 ~~~~y~~~~~lG~G~fg~Vy~~~~~-----~~g~~vaiK~~~~~~-----~~~~~E~~il~~l~-hpnIv~l~~~~~~~~ 203 (468)
...+|.+.+.||+|+||.||+|.+. .++..||+|++.... ..+.+|+.+|..+. ||||+++++++.
T Consensus 35 ~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~--- 111 (401)
T cd05107 35 PRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACT--- 111 (401)
T ss_pred cHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEc---
Confidence 3446899999999999999999864 345689999986542 13457999999997 999999999883
Q ss_pred CCCceEEEEEeecccchHH-HHHhhhh-----------------------------------------------------
Q 012233 204 EKDELYLNLVLEYISETVY-RVSKHYT----------------------------------------------------- 229 (468)
Q Consensus 204 ~~~~~~~~lv~e~~~~~ll-~~~~~~~----------------------------------------------------- 229 (468)
....+++||||+.++.+ +.+....
T Consensus 112 --~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (401)
T cd05107 112 --KGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADY 189 (401)
T ss_pred --cCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCc
Confidence 33458999999996544 3332110
Q ss_pred -----------------------------------------hcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCC
Q 012233 230 -----------------------------------------RMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQ 268 (468)
Q Consensus 230 -----------------------------------------~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~ 268 (468)
.....+++..++.++.||+.||.|||+ .||+||||||+
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~-~~ivHrdlkp~ 268 (401)
T cd05107 190 VPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLAS-KNCVHRDLAAR 268 (401)
T ss_pred cchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhc-CCcCcccCCcc
Confidence 011236677788999999999999997 89999999999
Q ss_pred CeeecCCCCcEEEeeecCccccCCCC---CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCC
Q 012233 269 NLLVNPHTHQLKICDFGSAKMLVPGE---PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGES 344 (468)
Q Consensus 269 NILl~~~~~~vkL~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~ 344 (468)
|||++.++ .+||+|||+++...... ......+++.|+|||.+.+.. ++.++|||||||++|||++ |..||....
T Consensus 269 NiLl~~~~-~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~DvwslGvil~e~l~~g~~P~~~~~ 346 (401)
T cd05107 269 NVLICEGK-LVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNL-YTTLSDVWSFGILLWEIFTLGGTPYPELP 346 (401)
T ss_pred eEEEeCCC-EEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCC-CCcHhHHHHHHHHHHHHHHcCCCCCCCCC
Confidence 99999877 79999999997653222 122345678899999996544 8999999999999999998 899998766
Q ss_pred cHHHHHHHHHHhCCCCHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 345 GVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 345 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
..+.....+..... ...+..++.++.+||.+||..+|.+||++.+++.
T Consensus 347 ~~~~~~~~~~~~~~---------------------------~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~ 394 (401)
T cd05107 347 MNEQFYNAIKRGYR---------------------------MAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVH 394 (401)
T ss_pred chHHHHHHHHcCCC---------------------------CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 55554443331100 0123457899999999999999999999999986
No 330
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=1.4e-37 Score=302.84 Aligned_cols=251 Identities=17% Similarity=0.208 Sum_probs=184.4
Q ss_pred ceEEeceecccCceEEEEEEEcCC---CCEEEEEEeecccchHH---------------HHHHHHHHcCCCCccccccee
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLET---GDSVAIKKVLQDKRYKN---------------RELQIMRLLNHPNVVSLKHCF 199 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~---g~~vaiK~~~~~~~~~~---------------~E~~il~~l~hpnIv~l~~~~ 199 (468)
+|.+.+.||+|+||.||+|.+..+ +..+|+|+......... .+...+..+.|+||+++++++
T Consensus 13 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~ 92 (294)
T PHA02882 13 EWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGCG 92 (294)
T ss_pred ceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEee
Confidence 599999999999999999998777 66777776432221111 122334556899999999876
Q ss_pred eecCCCCceEEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcE
Q 012233 200 FSTTEKDELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQL 279 (468)
Q Consensus 200 ~~~~~~~~~~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~v 279 (468)
.... ....+.+++++++...+...... ....++..++.++.|++.||.|||+ +||+||||||+|||++.++ .+
T Consensus 93 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~-~~iiHrDiKp~Nill~~~~-~~ 165 (294)
T PHA02882 93 SFKR-CRMYYRFILLEKLVENTKEIFKR----IKCKNKKLIKNIMKDMLTTLEYIHE-HGISHGDIKPENIMVDGNN-RG 165 (294)
T ss_pred eEec-CCceEEEEEEehhccCHHHHHHh----hccCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEEcCCC-cE
Confidence 4433 22345678999887766554432 2335677889999999999999998 8999999999999999887 79
Q ss_pred EEeeecCccccCCCC--------CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHH
Q 012233 280 KICDFGSAKMLVPGE--------PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVE 351 (468)
Q Consensus 280 kL~DFG~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~ 351 (468)
+|+|||+|+...... ......||+.|+|||++.+.. ++.++|||||||++|||++|..||.+.........
T Consensus 166 ~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~-~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~ 244 (294)
T PHA02882 166 YIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGAC-VTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIH 244 (294)
T ss_pred EEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCC-CCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHH
Confidence 999999997653221 122356899999999987654 89999999999999999999999987743333222
Q ss_pred HHHH--hCCCCHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 352 IIKI--LGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 352 i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
.... ...... ... ..+.+++++.+++..||..+|.+||+..++++
T Consensus 245 ~~~~~~~~~~~~----------~~~-------------~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~ 291 (294)
T PHA02882 245 AAKCDFIKRLHE----------GKI-------------KIKNANKFIYDFIECVTKLSYEEKPDYDALIK 291 (294)
T ss_pred HhHHHHHHHhhh----------hhh-------------ccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence 1110 000000 000 11346889999999999999999999999864
No 331
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=7.9e-38 Score=299.93 Aligned_cols=245 Identities=24% Similarity=0.340 Sum_probs=191.3
Q ss_pred cceEEeceecccCceEEEEEEEcCCCC---EEEEEEeeccc-----chHHHHHHHHHHcCCCCcccccceeeecCCCCce
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLETGD---SVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDEL 208 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~---~vaiK~~~~~~-----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 208 (468)
.+|++.+.||+|+||.||+|.+..++. .+|+|.+.... ..+.+|+.+++.++||||+++++++ ....
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~ 78 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVV-----TKSK 78 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEE-----ecCC
Confidence 369999999999999999999865544 69999875432 2445799999999999999999987 3344
Q ss_pred EEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCcc
Q 012233 209 YLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAK 288 (468)
Q Consensus 209 ~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~ 288 (468)
+.|+||||++++.+..... .....+++..+..++.|++.||.|||+ +||+||||||+|||++.++ .++|+|||++.
T Consensus 79 ~~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~i~~~i~~~l~~lH~-~~i~h~dlkp~nili~~~~-~~~l~dfg~~~ 154 (267)
T cd05066 79 PVMIVTEYMENGSLDAFLR--KHDGQFTVIQLVGMLRGIASGMKYLSD-MGYVHRDLAARNILVNSNL-VCKVSDFGLSR 154 (267)
T ss_pred ccEEEEEcCCCCCHHHHHH--hcCCCCCHHHHHHHHHHHHHHHHHHHH-CCEeehhhchhcEEECCCC-eEEeCCCCccc
Confidence 6889999998764443222 223468899999999999999999998 8999999999999999887 79999999997
Q ss_pred ccCCCCCC----ccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHH
Q 012233 289 MLVPGEPN----ISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREE 363 (468)
Q Consensus 289 ~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~ 363 (468)
........ ....++..|+|||.+.+. .++.++|+|||||++|++++ |..||......+....+.+..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~-~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~------- 226 (267)
T cd05066 155 VLEDDPEAAYTTRGGKIPIRWTAPEAIAYR-KFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGY------- 226 (267)
T ss_pred ccccccceeeecCCCccceeecCHhHhccC-ccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCC-------
Confidence 65433211 112235679999999654 48999999999999999886 999998776555444433210
Q ss_pred HhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 364 IKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
..+ .+..+++.+.+++.+||+.+|.+||++.+++.
T Consensus 227 -----------~~~----------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 261 (267)
T cd05066 227 -----------RLP----------APMDCPAALHQLMLDCWQKDRNERPKFEQIVS 261 (267)
T ss_pred -----------cCC----------CCCCCCHHHHHHHHHHcccCchhCCCHHHHHH
Confidence 001 11346889999999999999999999999875
No 332
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=7.1e-38 Score=304.87 Aligned_cols=254 Identities=22% Similarity=0.256 Sum_probs=190.5
Q ss_pred cceEEeceecccCceEEEEEEEcCCC--------------CEEEEEEeeccc-----chHHHHHHHHHHcCCCCcccccc
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLETG--------------DSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKH 197 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g--------------~~vaiK~~~~~~-----~~~~~E~~il~~l~hpnIv~l~~ 197 (468)
.+|++.+.||+|+||.||+|.+..++ ..||+|.+.... ..+.+|+++++.++|+||+++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~ 84 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG 84 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence 46999999999999999999875432 358999886432 23457999999999999999999
Q ss_pred eeeecCCCCceEEEEEeecccchHHHHHhhhhh---------cCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCC
Q 012233 198 CFFSTTEKDELYLNLVLEYISETVYRVSKHYTR---------MNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQ 268 (468)
Q Consensus 198 ~~~~~~~~~~~~~~lv~e~~~~~ll~~~~~~~~---------~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~ 268 (468)
++ ......++||||+.++.+........ ....+++..+..++.|++.||.|||+ +|++|+||||+
T Consensus 85 ~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~-~~i~H~dlkp~ 158 (295)
T cd05097 85 VC-----VSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLAS-LNFVHRDLATR 158 (295)
T ss_pred EE-----cCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHh-cCeeccccChh
Confidence 88 34445889999998754443222111 11236788889999999999999998 89999999999
Q ss_pred CeeecCCCCcEEEeeecCccccCCCCC---CccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh--CCCCCCCC
Q 012233 269 NLLVNPHTHQLKICDFGSAKMLVPGEP---NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL--GQPLFPGE 343 (468)
Q Consensus 269 NILl~~~~~~vkL~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~--G~~pf~~~ 343 (468)
|||++.++ .+||+|||++........ .....++..|+|||++.+.. ++.++|+|||||++|+|++ |..||...
T Consensus 159 Nill~~~~-~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~DvwSlG~~l~el~~~~~~~p~~~~ 236 (295)
T cd05097 159 NCLVGNHY-TIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGK-FTTASDVWAFGVTLWEMFTLCKEQPYSLL 236 (295)
T ss_pred hEEEcCCC-cEEecccccccccccCcceeccCcCcCceeecChhhhccCC-cCchhhHHHHHHHHHHHHHcCCCCCCccc
Confidence 99999887 799999999876533221 11234467899999986554 8999999999999999988 67888877
Q ss_pred CcHHHHHHHHHHhCCCCHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 344 SGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 344 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
+..+.+..+........ ...+ ...++.+++.+.+||.+||+.||.+||++.++++
T Consensus 237 ~~~~~~~~~~~~~~~~~------------~~~~---------~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~ 291 (295)
T cd05097 237 SDEQVIENTGEFFRNQG------------RQIY---------LSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHH 291 (295)
T ss_pred ChHHHHHHHHHhhhhcc------------cccc---------CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 66555544433110000 0000 0012346889999999999999999999999865
No 333
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.1e-37 Score=304.96 Aligned_cols=249 Identities=23% Similarity=0.329 Sum_probs=191.5
Q ss_pred cccceEEeceecccCceEEEEEEEc-------CCCCEEEEEEeeccc-----chHHHHHHHHHHc-CCCCcccccceeee
Q 012233 135 QTISYMAERVVGTGSFGVVFQAKCL-------ETGDSVAIKKVLQDK-----RYKNRELQIMRLL-NHPNVVSLKHCFFS 201 (468)
Q Consensus 135 ~~~~y~~~~~lG~G~fg~Vy~~~~~-------~~g~~vaiK~~~~~~-----~~~~~E~~il~~l-~hpnIv~l~~~~~~ 201 (468)
...+|.+.+.||+|+||.||+|.+. ..+..||+|.+.... ....+|+.+++.+ +||||+++++++
T Consensus 13 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~-- 90 (304)
T cd05101 13 SRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC-- 90 (304)
T ss_pred cHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEE--
Confidence 3457999999999999999999753 234579999875432 2345799999999 899999999988
Q ss_pred cCCCCceEEEEEeecccchHH-HHHhhhhh------------cCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCC
Q 012233 202 TTEKDELYLNLVLEYISETVY-RVSKHYTR------------MNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQ 268 (468)
Q Consensus 202 ~~~~~~~~~~lv~e~~~~~ll-~~~~~~~~------------~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~ 268 (468)
.....+++||||+.++.+ ..+..... ....+++..+..++.||+.||.|||+ +||+||||||+
T Consensus 91 ---~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~-~givH~dlkp~ 166 (304)
T cd05101 91 ---TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLAS-QKCIHRDLAAR 166 (304)
T ss_pred ---ecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHH-CCeeecccccc
Confidence 334468899999987544 33332111 12357888899999999999999998 89999999999
Q ss_pred CeeecCCCCcEEEeeecCccccCCCCC---CccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCC
Q 012233 269 NLLVNPHTHQLKICDFGSAKMLVPGEP---NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGES 344 (468)
Q Consensus 269 NILl~~~~~~vkL~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~ 344 (468)
|||++.++ .+||+|||+++....... .....+++.|+|||++.+. .++.++|||||||++|+|++ |..||.+.+
T Consensus 167 Nili~~~~-~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~~l~el~~~g~~p~~~~~ 244 (304)
T cd05101 167 NVLVTENN-VMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDR-VYTHQSDVWSFGVLMWEIFTLGGSPYPGIP 244 (304)
T ss_pred eEEEcCCC-cEEECCCccceecccccccccccCCCCCceeeCchhhccC-CCCchhhHHHHHHHHHHHHcCCCCCcccCC
Confidence 99999887 799999999976643221 1223456789999998664 48999999999999999998 889998766
Q ss_pred cHHHHHHHHHHhCCCCHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 345 GVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 345 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
..+....+.... . ...+..++.++++||.+||+.+|.+|||+.++++
T Consensus 245 ~~~~~~~~~~~~------------------~----------~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~ 291 (304)
T cd05101 245 VEELFKLLKEGH------------------R----------MDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVE 291 (304)
T ss_pred HHHHHHHHHcCC------------------c----------CCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence 554433332100 0 0012357889999999999999999999999986
No 334
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=1.4e-37 Score=296.87 Aligned_cols=243 Identities=23% Similarity=0.324 Sum_probs=190.6
Q ss_pred cceEEeceecccCceEEEEEEEcCCCCEEEEEEeecc---cchHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEEE
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD---KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLV 213 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~---~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv 213 (468)
++|++.+.||+|+||.||+|.+. .+..+|+|.+... .....+|+.++++++|+||+++++++. . ...++|
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-----~-~~~~lv 78 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTMSPESFLEEAQIMKKLRHDKLVQLYAVVS-----E-EPIYIV 78 (260)
T ss_pred HHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCCCHHHHHHHHHHHHhcCCCceEEEEeEEC-----C-CCcEEE
Confidence 46999999999999999999865 5677999988643 234568999999999999999988762 1 136799
Q ss_pred eecccchHH-HHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCC
Q 012233 214 LEYISETVY-RVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP 292 (468)
Q Consensus 214 ~e~~~~~ll-~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~ 292 (468)
|||+.++.+ +.+.. .....+++..++.++.|++.||.|||+ .||+|+||||+||+++.++ .++|+|||++.....
T Consensus 79 ~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~~~l~~al~~lH~-~~i~H~di~p~Nili~~~~-~~~l~dfg~~~~~~~ 154 (260)
T cd05070 79 TEYMSKGSLLDFLKD--GEGRALKLPNLVDMAAQVAAGMAYIER-MNYIHRDLRSANILVGDGL-VCKIADFGLARLIED 154 (260)
T ss_pred EEecCCCcHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCccceEEEeCCc-eEEeCCceeeeeccC
Confidence 999986544 33322 123458899999999999999999998 8999999999999999887 799999999976543
Q ss_pred CCCC--ccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCC
Q 012233 293 GEPN--ISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP 369 (468)
Q Consensus 293 ~~~~--~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 369 (468)
.... ....++..|+|||.+.+. .++.++|+|||||++|+|++ |.+||.+.+..+....+....
T Consensus 155 ~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~------------- 220 (260)
T cd05070 155 NEYTARQGAKFPIKWTAPEAALYG-RFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGY------------- 220 (260)
T ss_pred cccccccCCCCCccccChHHHhcC-CCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC-------------
Confidence 2211 123345679999998654 48999999999999999999 999998876655544432210
Q ss_pred CCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 370 NYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
.. ..+...+..+.+||.+||..||.+|||+.+++.
T Consensus 221 -----~~----------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 255 (260)
T cd05070 221 -----RM----------PCPQDCPISLHELMLQCWKKDPEERPTFEYLQS 255 (260)
T ss_pred -----CC----------CCCCcCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 00 022357889999999999999999999999874
No 335
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=1e-37 Score=301.47 Aligned_cols=246 Identities=23% Similarity=0.338 Sum_probs=190.4
Q ss_pred ceEEeceecccCceEEEEEEEc-----CCCCEEEEEEeeccc----chHHHHHHHHHHcCCCCcccccceeeecCCCCce
Q 012233 138 SYMAERVVGTGSFGVVFQAKCL-----ETGDSVAIKKVLQDK----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDEL 208 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~-----~~g~~vaiK~~~~~~----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 208 (468)
+|++.+.||+|+||.||++... .++..+|+|.+.... ..+.+|+++++.++|+||+++++++ .+..
T Consensus 6 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~ 80 (280)
T cd05092 6 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVC-----TEGR 80 (280)
T ss_pred hceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEE-----ecCC
Confidence 5888999999999999999753 356789999875432 3456799999999999999999887 3344
Q ss_pred EEEEEeecccchHHH-HHhhhhh-----------cCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCC
Q 012233 209 YLNLVLEYISETVYR-VSKHYTR-----------MNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHT 276 (468)
Q Consensus 209 ~~~lv~e~~~~~ll~-~~~~~~~-----------~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~ 276 (468)
..++||||+.++.+. .+..... ....+++..+..++.||+.||.|||+ .||+||||||+|||++.++
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~-~~i~H~dlkp~nil~~~~~ 159 (280)
T cd05092 81 PLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLAS-LHFVHRDLATRNCLVGQGL 159 (280)
T ss_pred ceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHH-CCeecccccHhhEEEcCCC
Confidence 588999999865443 3322110 11347888999999999999999998 8999999999999999877
Q ss_pred CcEEEeeecCccccCCCCC---CccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHH
Q 012233 277 HQLKICDFGSAKMLVPGEP---NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEI 352 (468)
Q Consensus 277 ~~vkL~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~~~i 352 (468)
.+||+|||++........ .....+++.|+|||.+.+.. ++.++|||||||++|||++ |.+||......+.+..+
T Consensus 160 -~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~ 237 (280)
T cd05092 160 -VVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRK-FTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECI 237 (280)
T ss_pred -CEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCC-cCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHH
Confidence 799999999875533221 12234567899999986654 8999999999999999998 99999876665554443
Q ss_pred HHHhCCCCHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 353 IKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
.... .. ..+..+++.+.+||.+||+.||.+||++.+++.
T Consensus 238 ~~~~----------------~~------------~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~ 276 (280)
T cd05092 238 TQGR----------------EL------------ERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHS 276 (280)
T ss_pred HcCc----------------cC------------CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 3210 00 012347889999999999999999999999874
No 336
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.3e-37 Score=308.52 Aligned_cols=249 Identities=23% Similarity=0.327 Sum_probs=190.7
Q ss_pred ccceEEeceecccCceEEEEEEEcCC-------CCEEEEEEeeccc-----chHHHHHHHHHHc-CCCCcccccceeeec
Q 012233 136 TISYMAERVVGTGSFGVVFQAKCLET-------GDSVAIKKVLQDK-----RYKNRELQIMRLL-NHPNVVSLKHCFFST 202 (468)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~~~~-------g~~vaiK~~~~~~-----~~~~~E~~il~~l-~hpnIv~l~~~~~~~ 202 (468)
..+|.+.+.||+|+||.||+|.+... +..||+|.+.... ....+|+.+++++ +||||+++++++
T Consensus 11 ~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~--- 87 (334)
T cd05100 11 RTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGAC--- 87 (334)
T ss_pred HhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEE---
Confidence 34699999999999999999986432 2368999876432 2345799999999 799999999988
Q ss_pred CCCCceEEEEEeecccchHHH-HHhhhh------------hcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCC
Q 012233 203 TEKDELYLNLVLEYISETVYR-VSKHYT------------RMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQN 269 (468)
Q Consensus 203 ~~~~~~~~~lv~e~~~~~ll~-~~~~~~------------~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~N 269 (468)
.....+++||||++++.+. .+.... .....+++..+..++.||+.||.|||+ +||+||||||+|
T Consensus 88 --~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~-~givH~dlkp~N 164 (334)
T cd05100 88 --TQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLAS-QKCIHRDLAARN 164 (334)
T ss_pred --ccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHH-CCeeccccccce
Confidence 3344588999999875443 333211 112347788889999999999999998 899999999999
Q ss_pred eeecCCCCcEEEeeecCccccCCCCC---CccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCc
Q 012233 270 LLVNPHTHQLKICDFGSAKMLVPGEP---NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESG 345 (468)
Q Consensus 270 ILl~~~~~~vkL~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~ 345 (468)
||++.++ .+||+|||+++....... .....++..|+|||++.+. .++.++|||||||++|||++ |..||.+.+.
T Consensus 165 ill~~~~-~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~el~~~g~~p~~~~~~ 242 (334)
T cd05100 165 VLVTEDN-VMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDR-VYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV 242 (334)
T ss_pred EEEcCCC-cEEECCcccceecccccccccccCCCcCceEcCHHHhccC-CcCchhhhHHHHHHHHHHHhcCCCCCCCCCH
Confidence 9999887 799999999976543221 1122335679999999654 48999999999999999998 8999987765
Q ss_pred HHHHHHHHHHhCCCCHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCC
Q 012233 346 VDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAH 420 (468)
Q Consensus 346 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~h 420 (468)
.+....+.... . ...+..++.++.+||.+||+.+|.+||++.+++.+
T Consensus 243 ~~~~~~~~~~~------------------~----------~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~ 289 (334)
T cd05100 243 EELFKLLKEGH------------------R----------MDKPANCTHELYMIMRECWHAVPSQRPTFKQLVED 289 (334)
T ss_pred HHHHHHHHcCC------------------C----------CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence 55443332200 0 00223468899999999999999999999999874
No 337
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=1.4e-37 Score=298.37 Aligned_cols=244 Identities=23% Similarity=0.344 Sum_probs=191.2
Q ss_pred ceEEeceecccCceEEEEEEEcCCCC---EEEEEEeeccc-----chHHHHHHHHHHcCCCCcccccceeeecCCCCceE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGD---SVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELY 209 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~---~vaiK~~~~~~-----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~ 209 (468)
.|++.+.||+|+||.||+|.+..++. .||||.+.... ..+..|+.+++.++||||+++++++ .+...
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~-----~~~~~ 79 (269)
T cd05065 5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVV-----TKSRP 79 (269)
T ss_pred HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEE-----CCCCc
Confidence 58999999999999999999877665 59999875431 2345799999999999999999987 44445
Q ss_pred EEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccc
Q 012233 210 LNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (468)
Q Consensus 210 ~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~ 289 (468)
.++||||++++.+..... .....+++..++.++.|++.||.|||+ +|++|+||||+|||++.++ .+||+|||++..
T Consensus 80 ~~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~~i~~~l~~al~~lH~-~g~~H~dl~p~nili~~~~-~~kl~dfg~~~~ 155 (269)
T cd05065 80 VMIITEFMENGALDSFLR--QNDGQFTVIQLVGMLRGIAAGMKYLSE-MNYVHRDLAARNILVNSNL-VCKVSDFGLSRF 155 (269)
T ss_pred eEEEEecCCCCcHHHHHh--hCCCCCCHHHHHHHHHHHHHHHHHHHH-CCEeecccChheEEEcCCC-cEEECCCccccc
Confidence 889999999765543322 223568899999999999999999998 8999999999999999887 799999999876
Q ss_pred cCCCCCCcc---cc---ccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHH
Q 012233 290 LVPGEPNIS---YI---CSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTRE 362 (468)
Q Consensus 290 ~~~~~~~~~---~~---gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~ 362 (468)
......... .. .+..|+|||.+.+. .++.++|||||||++|||++ |..||...+..+....+...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~-~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~------- 227 (269)
T cd05065 156 LEDDTSDPTYTSSLGGKIPIRWTAPEAIAYR-KFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQD------- 227 (269)
T ss_pred cccCccccccccccCCCcceeecCHhHhccC-cccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcC-------
Confidence 543222111 11 24579999998654 48999999999999999886 99999876655544443221
Q ss_pred HHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 363 EIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
...+ .+..++..+.+++.+||+.+|.+||++.+++.
T Consensus 228 -----------~~~~----------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 263 (269)
T cd05065 228 -----------YRLP----------PPMDCPTALHQLMLDCWQKDRNARPKFGQIVS 263 (269)
T ss_pred -----------CcCC----------CcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 0111 12346889999999999999999999999875
No 338
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=1.8e-37 Score=295.33 Aligned_cols=241 Identities=25% Similarity=0.370 Sum_probs=191.1
Q ss_pred cceEEeceecccCceEEEEEEEcCCCCEEEEEEeecccc---hHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEEE
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKR---YKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLV 213 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~~---~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv 213 (468)
.+|++.+.||.|+||.||+|.. .|+.||+|.+..... ...+|+.+++.++|+||+++++++. +....++|
T Consensus 6 ~~~~~~~~ig~g~~g~v~~~~~--~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~~v 78 (256)
T cd05039 6 KELKLGATIGKGEFGDVMLGDY--RGQKVAVKCLKDDSTAAQAFLAEASVMTTLRHPNLVQLLGVVL-----QGNPLYIV 78 (256)
T ss_pred hhccceeeeecCCCceEEEEEe--cCcEEEEEEeccchhHHHHHHHHHHHHHhcCCcceeeeEEEEc-----CCCCeEEE
Confidence 3589999999999999999987 589999999866544 4457999999999999999999884 34458899
Q ss_pred eecccchHH-HHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCC
Q 012233 214 LEYISETVY-RVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP 292 (468)
Q Consensus 214 ~e~~~~~ll-~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~ 292 (468)
|||++++.+ +.+.. .....+++..+..++.|++.||.|||+ +||+|+||||+|||++.++ .++|+|||.+.....
T Consensus 79 ~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~~qi~~~l~~lh~-~~i~H~di~p~Nili~~~~-~~~l~d~g~~~~~~~ 154 (256)
T cd05039 79 TEYMAKGSLVDYLRS--RGRAVITLAQQLGFALDVCEGMEYLEE-KNFVHRDLAARNVLVSEDL-VAKVSDFGLAKEASQ 154 (256)
T ss_pred EEecCCCcHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHHHh-CCccchhcccceEEEeCCC-CEEEccccccccccc
Confidence 999996544 33322 112368999999999999999999998 8999999999999999887 799999999976632
Q ss_pred CCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCC
Q 012233 293 GEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNY 371 (468)
Q Consensus 293 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 371 (468)
.. .....+..|+|||.+.+. .++.++|+|||||++|+|++ |..||......+....+...
T Consensus 155 ~~--~~~~~~~~~~ape~~~~~-~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~---------------- 215 (256)
T cd05039 155 GQ--DSGKLPVKWTAPEALREK-KFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKG---------------- 215 (256)
T ss_pred cc--ccCCCcccccCchhhcCC-cCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcC----------------
Confidence 22 233446679999998654 48899999999999999997 99999876544433322110
Q ss_pred ccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 372 TEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
+. ...+..+++++.++|.+||..+|.+||++.+++.
T Consensus 216 --~~----------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 251 (256)
T cd05039 216 --YR----------MEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLRE 251 (256)
T ss_pred --CC----------CCCccCCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 00 0122347899999999999999999999999875
No 339
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.8e-37 Score=304.93 Aligned_cols=249 Identities=22% Similarity=0.322 Sum_probs=190.7
Q ss_pred cccceEEeceecccCceEEEEEEEcC-------CCCEEEEEEeeccc-----chHHHHHHHHHHc-CCCCcccccceeee
Q 012233 135 QTISYMAERVVGTGSFGVVFQAKCLE-------TGDSVAIKKVLQDK-----RYKNRELQIMRLL-NHPNVVSLKHCFFS 201 (468)
Q Consensus 135 ~~~~y~~~~~lG~G~fg~Vy~~~~~~-------~g~~vaiK~~~~~~-----~~~~~E~~il~~l-~hpnIv~l~~~~~~ 201 (468)
...+|.+.+.||+|+||.||+|.+.. ....+|+|.+.... ....+|+.+++.+ +||||+++++++
T Consensus 10 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~-- 87 (314)
T cd05099 10 PRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVC-- 87 (314)
T ss_pred cHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEE--
Confidence 34579999999999999999998632 34579999876432 1245799999999 699999999988
Q ss_pred cCCCCceEEEEEeecccchHH-HHHhhhhh------------cCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCC
Q 012233 202 TTEKDELYLNLVLEYISETVY-RVSKHYTR------------MNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQ 268 (468)
Q Consensus 202 ~~~~~~~~~~lv~e~~~~~ll-~~~~~~~~------------~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~ 268 (468)
.+..++++||||+.++.+ ..+..... ....+++..+..++.||+.||.|||+ +||+||||||+
T Consensus 88 ---~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~-~gi~H~dlkp~ 163 (314)
T cd05099 88 ---TQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLES-RRCIHRDLAAR 163 (314)
T ss_pred ---ccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHH-CCeeeccccce
Confidence 344468999999986544 33332211 12457888899999999999999998 89999999999
Q ss_pred CeeecCCCCcEEEeeecCccccCCCCC---CccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCC
Q 012233 269 NLLVNPHTHQLKICDFGSAKMLVPGEP---NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGES 344 (468)
Q Consensus 269 NILl~~~~~~vkL~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~ 344 (468)
|||++.++ .+||+|||+++....... .....++..|+|||++.+. .++.++|||||||++|+|++ |..||.+..
T Consensus 164 Nill~~~~-~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~el~~~g~~p~~~~~ 241 (314)
T cd05099 164 NVLVTEDN-VMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDR-VYTHQSDVWSFGILMWEIFTLGGSPYPGIP 241 (314)
T ss_pred eEEEcCCC-cEEEccccccccccccccccccccCCCCccccCHHHHccC-CcCccchhhHHHHHHHHHHhCCCCCCCCCC
Confidence 99999887 799999999976533211 1122334679999998654 48999999999999999998 899998766
Q ss_pred cHHHHHHHHHHhCCCCHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 345 GVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 345 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
..+.+..+... ... .++..++.++++||.+||..||.+|||+.+++.
T Consensus 242 ~~~~~~~~~~~----------------~~~------------~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~ 288 (314)
T cd05099 242 VEELFKLLREG----------------HRM------------DKPSNCTHELYMLMRECWHAVPTQRPTFKQLVE 288 (314)
T ss_pred HHHHHHHHHcC----------------CCC------------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 54444433220 000 022357889999999999999999999999886
No 340
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=1.1e-37 Score=297.33 Aligned_cols=237 Identities=24% Similarity=0.270 Sum_probs=184.1
Q ss_pred eecccCceEEEEEEEc--CCCCEEEEEEeeccc-----chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEEEeec
Q 012233 144 VVGTGSFGVVFQAKCL--ETGDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVLEY 216 (468)
Q Consensus 144 ~lG~G~fg~Vy~~~~~--~~g~~vaiK~~~~~~-----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv~e~ 216 (468)
.||+|+||.||+|.+. ..+..||+|++.... ..+.+|+.++++++||||+++++++ .. ...++||||
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~-----~~-~~~~lv~e~ 75 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVC-----EA-EALMLVMEM 75 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEE-----cC-CCeEEEEEe
Confidence 3899999999999875 445679999885432 2345799999999999999999876 22 247899999
Q ss_pred ccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCCCCC-
Q 012233 217 ISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGEP- 295 (468)
Q Consensus 217 ~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~~~~- 295 (468)
++++.+..... .....+++..+..++.||+.||.|||+ +|++||||||+|||++.++ .+||+|||++........
T Consensus 76 ~~~~~L~~~l~--~~~~~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dlkp~nil~~~~~-~~kl~dfg~~~~~~~~~~~ 151 (257)
T cd05115 76 ASGGPLNKFLS--GKKDEITVSNVVELMHQVSMGMKYLEG-KNFVHRDLAARNVLLVNQH-YAKISDFGLSKALGADDSY 151 (257)
T ss_pred CCCCCHHHHHH--hCCCCCCHHHHHHHHHHHHHHHHHHHh-cCeeecccchheEEEcCCC-cEEeccCCccccccCCccc
Confidence 98765543221 224568999999999999999999998 8999999999999999887 799999999975533221
Q ss_pred ---CccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCC
Q 012233 296 ---NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNY 371 (468)
Q Consensus 296 ---~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 371 (468)
.....++..|+|||.+.+.. ++.++|||||||++|+|++ |..||......+....+....
T Consensus 152 ~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~--------------- 215 (257)
T cd05115 152 YKARSAGKWPLKWYAPECINFRK-FSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGK--------------- 215 (257)
T ss_pred eeccCCCCCCcccCCHHHHccCC-CCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCC---------------
Confidence 11122357899999986544 8999999999999999996 999998876655444332210
Q ss_pred ccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 372 TEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
. ..++...++++.++|.+||..||.+||++.++++
T Consensus 216 -~------------~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~ 250 (257)
T cd05115 216 -R------------LDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEE 250 (257)
T ss_pred -C------------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 0 0123457899999999999999999999999865
No 341
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=1.7e-37 Score=296.44 Aligned_cols=244 Identities=23% Similarity=0.319 Sum_probs=192.1
Q ss_pred ccceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc---chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEE
Q 012233 136 TISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK---RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNL 212 (468)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~---~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~l 212 (468)
..+|++.+.||+|+||.||+|... +++.||+|.+.... ....+|+.+++.++|+||+++++++. + ...++
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~-~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-----~-~~~~~ 77 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHPRLVRLYAVVT-----Q-EPIYI 77 (260)
T ss_pred hHHceeeeeeccCccceEEeeecC-CCceEEEEEecCCCCcHHHHHHHHHHHHhcCCcCeeeEEEEEc-----c-CCcEE
Confidence 346999999999999999999864 57889999886543 34567999999999999999988651 1 23789
Q ss_pred Eeecccch-HHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccC
Q 012233 213 VLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (468)
Q Consensus 213 v~e~~~~~-ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~ 291 (468)
||||+.++ +.+.+.. .....+++..+..++.|++.||+|||+ .|++|+||||+||+++.++ .++|+|||++....
T Consensus 78 v~e~~~~~~L~~~~~~--~~~~~~~~~~~~~i~~~i~~al~~LH~-~~i~H~dl~p~ni~i~~~~-~~~l~dfg~~~~~~ 153 (260)
T cd05067 78 ITEYMENGSLVDFLKT--PEGIKLTINKLIDMAAQIAEGMAFIER-KNYIHRDLRAANILVSETL-CCKIADFGLARLIE 153 (260)
T ss_pred EEEcCCCCCHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHHhc-CCeecccccHHhEEEcCCC-CEEEccCcceeecC
Confidence 99999865 4443322 123568889999999999999999998 8999999999999999887 79999999997654
Q ss_pred CCCC--CccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcC
Q 012233 292 PGEP--NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEIKCMN 368 (468)
Q Consensus 292 ~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 368 (468)
.... .....++..|+|||++.+. .++.++|||||||++|+|++ |++||.+.+..+....+......
T Consensus 154 ~~~~~~~~~~~~~~~y~~pe~~~~~-~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~---------- 222 (260)
T cd05067 154 DNEYTAREGAKFPIKWTAPEAINYG-TFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGYRM---------- 222 (260)
T ss_pred CCCcccccCCcccccccCHHHhccC-CcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCCCC----------
Confidence 2221 1233456789999998654 48899999999999999998 99999887665544443221100
Q ss_pred CCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 369 PNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
+ .+..++.++.++|.+||..+|.+||++++++.
T Consensus 223 --------~----------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05067 223 --------P----------RPDNCPEELYELMRLCWKEKPEERPTFEYLRS 255 (260)
T ss_pred --------C----------CCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 0 12346789999999999999999999999876
No 342
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=2.5e-37 Score=295.17 Aligned_cols=245 Identities=26% Similarity=0.328 Sum_probs=193.9
Q ss_pred ccceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc---chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEE
Q 012233 136 TISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK---RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNL 212 (468)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~---~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~l 212 (468)
.++|.+.+.||.|+||.||+|.+. .+..||||.+.... ....+|+.+++.++|+||+++++++ ......++
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~~ 78 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVC-----SEEEPIYI 78 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCccCHHHHHHHHHHHhhCCCCCEeeeeeee-----ecCCceEE
Confidence 456999999999999999999975 55789999886542 3456799999999999999999887 33345889
Q ss_pred EeecccchHH-HHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccC
Q 012233 213 VLEYISETVY-RVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (468)
Q Consensus 213 v~e~~~~~ll-~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~ 291 (468)
||||+.++.+ +.+.. .....+++..+..++.||+.||.|||+ +||+|+||||+||+++.++ .++|+|||++....
T Consensus 79 v~e~~~~~~L~~~i~~--~~~~~~~~~~~~~~~~~i~~al~~lh~-~~i~h~di~p~nili~~~~-~~~l~d~g~~~~~~ 154 (261)
T cd05034 79 VTEYMSKGSLLDFLKS--GEGKKLRLPQLVDMAAQIAEGMAYLES-RNYIHRDLAARNILVGENL-VCKIADFGLARLIE 154 (261)
T ss_pred EEeccCCCCHHHHHhc--cccCCCCHHHHHHHHHHHHHHHHHHHh-CCcccCCcchheEEEcCCC-CEEECccccceecc
Confidence 9999986544 33322 123468899999999999999999998 8999999999999999887 79999999987654
Q ss_pred CCCC--CccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcC
Q 012233 292 PGEP--NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEIKCMN 368 (468)
Q Consensus 292 ~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 368 (468)
.... .....++..|+|||.+.+.. ++.++|+|||||++|+|++ |+.||.+.+....+..+......
T Consensus 155 ~~~~~~~~~~~~~~~y~~PE~~~~~~-~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~---------- 223 (261)
T cd05034 155 DDEYTAREGAKFPIKWTAPEAANYGR-FTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGYRM---------- 223 (261)
T ss_pred chhhhhhhccCCCccccCHHHhccCC-cCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC----------
Confidence 3211 11223456899999987544 8999999999999999998 99999887766555554331100
Q ss_pred CCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 369 PNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
..+...+.++.+++.+||+.||.+||++.+++.
T Consensus 224 ------------------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 256 (261)
T cd05034 224 ------------------PRPPNCPEELYDLMLQCWDKDPEERPTFEYLQS 256 (261)
T ss_pred ------------------CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 012346789999999999999999999999875
No 343
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=1.6e-37 Score=297.69 Aligned_cols=245 Identities=22% Similarity=0.317 Sum_probs=191.8
Q ss_pred cceEEeceecccCceEEEEEEEcCCCC---EEEEEEeeccc-----chHHHHHHHHHHcCCCCcccccceeeecCCCCce
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLETGD---SVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDEL 208 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~---~vaiK~~~~~~-----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 208 (468)
.+|...+.||+|+||.||+|.+..++. .+|+|.+.... ....+|+.+++.++|+||+++.+++ .+..
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~ 79 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVV-----TKFK 79 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEE-----ccCC
Confidence 358889999999999999999876655 69999875432 2345689999999999999999988 3344
Q ss_pred EEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCcc
Q 012233 209 YLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAK 288 (468)
Q Consensus 209 ~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~ 288 (468)
..++||||++++.+..... .....+++..+..++.|++.||.|||+ .||+|+||||+|||++.++ .+||+|||++.
T Consensus 80 ~~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~~~l~~al~~lH~-~~i~H~dlkp~Nili~~~~-~~kl~dfg~~~ 155 (268)
T cd05063 80 PAMIITEYMENGALDKYLR--DHDGEFSSYQLVGMLRGIAAGMKYLSD-MNYVHRDLAARNILVNSNL-ECKVSDFGLSR 155 (268)
T ss_pred CcEEEEEcCCCCCHHHHHH--hcCCCCCHHHHHHHHHHHHHHHHHHHH-CCeeccccchhhEEEcCCC-cEEECCCccce
Confidence 5889999999876543322 223568899999999999999999998 8999999999999999887 79999999987
Q ss_pred ccCCCCCCc----cccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHH
Q 012233 289 MLVPGEPNI----SYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREE 363 (468)
Q Consensus 289 ~~~~~~~~~----~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~ 363 (468)
......... ....+..|+|||++.+. .++.++|||||||++|||++ |..||...+..+....+....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~-~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~~------- 227 (268)
T cd05063 156 VLEDDPEGTYTTSGGKIPIRWTAPEAIAYR-KFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGF------- 227 (268)
T ss_pred ecccccccceeccCCCcCceecCHHHhhcC-CcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcCC-------
Confidence 654322111 11234579999998654 48999999999999999997 999998776655444443211
Q ss_pred HhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 364 IKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
..+ ....++.++.+|+.+||+.+|.+||++.++++
T Consensus 228 -----------~~~----------~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~ 262 (268)
T cd05063 228 -----------RLP----------APMDCPSAVYQLMLQCWQQDRARRPRFVDIVN 262 (268)
T ss_pred -----------CCC----------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 000 11246789999999999999999999999975
No 344
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=2.4e-37 Score=295.39 Aligned_cols=243 Identities=24% Similarity=0.322 Sum_probs=190.3
Q ss_pred cceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc---chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEEE
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK---RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLV 213 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~---~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv 213 (468)
.+|.+.+.||+|+||.||+|.+..+ ..+|+|.+.... ....+|+.+++.++|+||+++++++. . ...++|
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-----~-~~~~~v 78 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPLYAVVS-----E-EPIYIV 78 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCCccHHHHHHHHHHHHhCCCCCeeeEEEEEc-----C-CCcEEE
Confidence 4699999999999999999987554 469999875433 23457999999999999999988762 1 236799
Q ss_pred eecccch-HHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCC
Q 012233 214 LEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP 292 (468)
Q Consensus 214 ~e~~~~~-ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~ 292 (468)
|||+.++ +.+.+... ....+++..+..++.|++.||.|||+ .||+|+||||+|||++.++ .++|+|||++.....
T Consensus 79 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~al~~lH~-~~i~H~dl~~~Nill~~~~-~~~l~dfg~~~~~~~ 154 (260)
T cd05069 79 TEFMGKGSLLDFLKEG--DGKYLKLPQLVDMAAQIADGMAYIER-MNYIHRDLRAANILVGDNL-VCKIADFGLARLIED 154 (260)
T ss_pred EEcCCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHh-CCEeecccCcceEEEcCCC-eEEECCCccceEccC
Confidence 9999864 55544321 23457888999999999999999998 8999999999999999887 799999999976533
Q ss_pred CCC--CccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCC
Q 012233 293 GEP--NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP 369 (468)
Q Consensus 293 ~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 369 (468)
... .....++..|+|||.+.+.. ++.++|+|||||++|+|++ |..||.+....+....+....
T Consensus 155 ~~~~~~~~~~~~~~y~~Pe~~~~~~-~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~------------- 220 (260)
T cd05069 155 NEYTARQGAKFPIKWTAPEAALYGR-FTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGY------------- 220 (260)
T ss_pred CcccccCCCccchhhCCHHHhccCC-cChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-------------
Confidence 221 12234567899999886544 8999999999999999999 999998876655444332210
Q ss_pred CCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 370 NYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
.. .++..++..+.++|.+||..||.+||++++++.
T Consensus 221 -----~~----------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 255 (260)
T cd05069 221 -----RM----------PCPQGCPESLHELMKLCWKKDPDERPTFEYIQS 255 (260)
T ss_pred -----CC----------CCCcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 00 022357889999999999999999999999875
No 345
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=1.3e-37 Score=301.91 Aligned_cols=247 Identities=24% Similarity=0.294 Sum_probs=190.7
Q ss_pred cceEEeceecccCceEEEEEEEcC-----CCCEEEEEEeeccc-----chHHHHHHHHHHcCCCCcccccceeeecCCCC
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLE-----TGDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKD 206 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~-----~g~~vaiK~~~~~~-----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 206 (468)
.+|.+.+.||+|+||.||+|.+.. ++..||+|.+.... ..+.+|+.+++.++||||+++++++ .+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~-----~~ 79 (288)
T cd05050 5 NNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVC-----AV 79 (288)
T ss_pred HhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEE-----cC
Confidence 469999999999999999998743 67889999886432 3355799999999999999999987 33
Q ss_pred ceEEEEEeecccch-HHHHHhhhh------------------hcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCC
Q 012233 207 ELYLNLVLEYISET-VYRVSKHYT------------------RMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKP 267 (468)
Q Consensus 207 ~~~~~lv~e~~~~~-ll~~~~~~~------------------~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp 267 (468)
....++||||++++ +.+.+.... .....+++..+..++.||+.||.|||+ .|++||||||
T Consensus 80 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~-~~i~H~dl~p 158 (288)
T cd05050 80 GKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSE-RKFVHRDLAT 158 (288)
T ss_pred CCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHh-CCeecccccH
Confidence 44578999999965 444333211 112346788889999999999999998 8999999999
Q ss_pred CCeeecCCCCcEEEeeecCccccCCCCC---CccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCC
Q 012233 268 QNLLVNPHTHQLKICDFGSAKMLVPGEP---NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGE 343 (468)
Q Consensus 268 ~NILl~~~~~~vkL~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~ 343 (468)
+|||++.++ .++|+|||++........ ......+..|+|||.+.+. .++.++|||||||++|+|++ |..||.+.
T Consensus 159 ~nil~~~~~-~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~~~~~p~~~~ 236 (288)
T cd05050 159 RNCLVGENM-VVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYN-RYTTESDVWAYGVVLWEIFSYGMQPYYGM 236 (288)
T ss_pred hheEecCCC-ceEECccccceecccCccccccCCCccChhhcCHHHHhcC-CCCchhHHHHHHHHHHHHHhCCCCCCCCC
Confidence 999999888 799999999875432211 1223346679999998655 48999999999999999997 88999876
Q ss_pred CcHHHHHHHHHHhCCCCHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 344 SGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 344 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
+..+....+.... .. ..+..++.++.+||.+||+.||.+|||+.|+++
T Consensus 237 ~~~~~~~~~~~~~-------------------~~---------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~ 284 (288)
T cd05050 237 AHEEVIYYVRDGN-------------------VL---------SCPDNCPLELYNLMRLCWSKLPSDRPSFASINR 284 (288)
T ss_pred CHHHHHHHHhcCC-------------------CC---------CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 6555444332200 00 012346889999999999999999999999874
No 346
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=9.7e-38 Score=299.92 Aligned_cols=241 Identities=23% Similarity=0.330 Sum_probs=182.9
Q ss_pred ceecccCceEEEEEEEcCCCC--EEEEEEeeccc-----chHHHHHHHHHHc-CCCCcccccceeeecCCCCceEEEEEe
Q 012233 143 RVVGTGSFGVVFQAKCLETGD--SVAIKKVLQDK-----RYKNRELQIMRLL-NHPNVVSLKHCFFSTTEKDELYLNLVL 214 (468)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~~g~--~vaiK~~~~~~-----~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~~~~~~lv~ 214 (468)
++||+|+||.||+|.+..++. .+++|.+.... ....+|+.+++++ .||||+++++++ ....+.++||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~-----~~~~~~~lv~ 75 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGAC-----EHRGYLYLAI 75 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEE-----ecCCCceEEE
Confidence 368999999999999988776 46888775321 2345699999999 799999999988 3344588999
Q ss_pred ecccch-HHHHHhhhh------------hcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEE
Q 012233 215 EYISET-VYRVSKHYT------------RMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKI 281 (468)
Q Consensus 215 e~~~~~-ll~~~~~~~------------~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL 281 (468)
||+.++ +.+.+.... .....+++..+..++.|++.||+|||+ +|++||||||+|||++.++ .+||
T Consensus 76 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~-~~i~H~dikp~nili~~~~-~~kl 153 (270)
T cd05047 76 EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ-KQFIHRDLAARNILVGENY-VAKI 153 (270)
T ss_pred EeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHH-CCEeecccccceEEEcCCC-eEEE
Confidence 999865 444433211 112347888999999999999999998 8999999999999999888 7999
Q ss_pred eeecCccccCCCCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCC
Q 012233 282 CDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPT 360 (468)
Q Consensus 282 ~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~ 360 (468)
+|||++..............+..|+|||++... .++.++|+|||||++|||++ |..||.+.+..+....+...
T Consensus 154 ~dfgl~~~~~~~~~~~~~~~~~~y~apE~~~~~-~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~----- 227 (270)
T cd05047 154 ADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYS-VYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG----- 227 (270)
T ss_pred CCCCCccccchhhhccCCCCccccCChHHHccC-CCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhCC-----
Confidence 999998533221112223345679999998654 48999999999999999996 99999876654443332110
Q ss_pred HHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 361 REEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
... ..+..++.++.+|+.+||..||.+|||+.+++.
T Consensus 228 -------------~~~----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 263 (270)
T cd05047 228 -------------YRL----------EKPLNCDDEVYDLMRQCWREKPYERPSFAQILV 263 (270)
T ss_pred -------------CCC----------CCCCcCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence 000 012346789999999999999999999999875
No 347
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=2.4e-37 Score=294.51 Aligned_cols=239 Identities=26% Similarity=0.338 Sum_probs=188.0
Q ss_pred ceecccCceEEEEEEEcC-CCC--EEEEEEeecccc-----hHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEEEe
Q 012233 143 RVVGTGSFGVVFQAKCLE-TGD--SVAIKKVLQDKR-----YKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVL 214 (468)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~-~g~--~vaiK~~~~~~~-----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv~ 214 (468)
+.||+|+||.||+|.+.. .+. .||||.+..... .+.+|+.++++++||||+++++.+. + ...++||
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~-~~~~~v~ 74 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVL-----T-HPLMMVT 74 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEc-----C-CeEEEEE
Confidence 468999999999999865 333 589998865543 3457999999999999999999874 3 4688999
Q ss_pred ecccch-HHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCCC
Q 012233 215 EYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPG 293 (468)
Q Consensus 215 e~~~~~-ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~~ 293 (468)
||+.++ +...+.... ...+++..++.++.|++.||.|||+ +|++|+||||+|||++.++ .+||+|||++......
T Consensus 75 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~-~~i~H~di~p~nil~~~~~-~~kl~dfg~~~~~~~~ 150 (257)
T cd05040 75 ELAPLGSLLDRLRKDA--LGHFLISTLCDYAVQIANGMRYLES-KRFIHRDLAARNILLASDD-KVKIGDFGLMRALPQN 150 (257)
T ss_pred EecCCCcHHHHHHhcc--cccCcHHHHHHHHHHHHHHHHHHHh-CCccccccCcccEEEecCC-EEEecccccccccccc
Confidence 999755 444333221 1468899999999999999999998 8999999999999999887 7999999999776432
Q ss_pred CC----CccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcC
Q 012233 294 EP----NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEIKCMN 368 (468)
Q Consensus 294 ~~----~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 368 (468)
.. .....++..|+|||.+.+. .++.++|||||||++|+|++ |..||...+..+....+....
T Consensus 151 ~~~~~~~~~~~~~~~y~~pE~~~~~-~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~------------ 217 (257)
T cd05040 151 EDHYVMEEHLKVPFAWCAPESLRTR-TFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEG------------ 217 (257)
T ss_pred ccceecccCCCCCceecCHHHhccc-CcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcC------------
Confidence 21 1123467789999998654 48999999999999999998 999998777666555443210
Q ss_pred CCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 369 PNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
.... .+..++..+.++|.+||+.+|.+||++.++++
T Consensus 218 ---~~~~------------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 253 (257)
T cd05040 218 ---ERLE------------RPEACPQDIYNVMLQCWAHNPADRPTFAALRE 253 (257)
T ss_pred ---CcCC------------CCccCCHHHHHHHHHHCCCCcccCCCHHHHHH
Confidence 0000 12346789999999999999999999999875
No 348
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=2.3e-37 Score=298.73 Aligned_cols=248 Identities=19% Similarity=0.265 Sum_probs=191.3
Q ss_pred cceEEeceecccCceEEEEEEEcC----CCCEEEEEEeeccc-----chHHHHHHHHHHcCCCCcccccceeeecCCCCc
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLE----TGDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDE 207 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~----~g~~vaiK~~~~~~-----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 207 (468)
++|.+.+.||+|+||.||+|.+.. ++..|++|.+.... ....+|+.+++.++|+||+++++++... .
T Consensus 6 ~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~----~ 81 (280)
T cd05043 6 DRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIED----G 81 (280)
T ss_pred hheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecC----C
Confidence 469999999999999999999865 35789999875432 2345799999999999999999977433 2
Q ss_pred eEEEEEeecccchHHH-HHhhhhhc----CCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEe
Q 012233 208 LYLNLVLEYISETVYR-VSKHYTRM----NQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKIC 282 (468)
Q Consensus 208 ~~~~lv~e~~~~~ll~-~~~~~~~~----~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~ 282 (468)
...+++++|++++.+. .+...... ...+++..+..++.||+.||.|||+ .|++|+||||+|||++.++ .+||+
T Consensus 82 ~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~i~H~di~p~nil~~~~~-~~kl~ 159 (280)
T cd05043 82 EPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHK-RGVIHKDIAARNCVIDEEL-QVKIT 159 (280)
T ss_pred CCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHH-CCEeecccCHhhEEEcCCC-cEEEC
Confidence 3477999999865443 33222111 1568899999999999999999998 8999999999999999887 79999
Q ss_pred eecCccccCCCCCC---ccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCC
Q 012233 283 DFGSAKMLVPGEPN---ISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGT 358 (468)
Q Consensus 283 DFG~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~ 358 (468)
|||+++.+...... ....++..|+|||++.+.. ++.++|||||||++||+++ |+.||...+..+....+...
T Consensus 160 d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~-~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~--- 235 (280)
T cd05043 160 DNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKE-YSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDG--- 235 (280)
T ss_pred CCCCcccccCCceEEeCCCCCcchhccCHHHHhcCC-CCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHcC---
Confidence 99999765433211 1234567899999986554 8999999999999999998 99999876554433222110
Q ss_pred CCHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 359 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
..++ ....+++++.+++.+||..||++|||+.+++.
T Consensus 236 ---------------~~~~----------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 271 (280)
T cd05043 236 ---------------YRLA----------QPINCPDELFAVMACCWALDPEERPSFSQLVQ 271 (280)
T ss_pred ---------------CCCC----------CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 0000 12346889999999999999999999999985
No 349
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.6e-38 Score=326.93 Aligned_cols=245 Identities=24% Similarity=0.324 Sum_probs=198.6
Q ss_pred ceEEeceecccCceEEEEEEEcC-----CCCEEEEEEeeccc-----chHHHHHHHHHHcCCCCcccccceeeecCCCCc
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLE-----TGDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDE 207 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~-----~g~~vaiK~~~~~~-----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 207 (468)
+-+..+.||+|+||+||+|+... ....||||.+++.. .++++|+++|..|+|||||+|+|++.. .
T Consensus 487 ~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~-----~ 561 (774)
T KOG1026|consen 487 DIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCRE-----G 561 (774)
T ss_pred heeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEcc-----C
Confidence 56677889999999999998743 34679999986543 457899999999999999999999943 3
Q ss_pred eEEEEEeeccc-chHHHHHhhhhhc----------CCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCC
Q 012233 208 LYLNLVLEYIS-ETVYRVSKHYTRM----------NQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHT 276 (468)
Q Consensus 208 ~~~~lv~e~~~-~~ll~~~~~~~~~----------~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~ 276 (468)
.-+|||+|||. |+|.++++..... ...++..+...|+.||+.|+.||-+ +.+|||||-..|+||..+.
T Consensus 562 ~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~-~~FVHRDLATRNCLVge~l 640 (774)
T KOG1026|consen 562 DPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSS-HHFVHRDLATRNCLVGENL 640 (774)
T ss_pred CeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-Ccccccchhhhhceeccce
Confidence 34889999998 5555555433211 2237788899999999999999998 8999999999999999888
Q ss_pred CcEEEeeecCccccCCCCCCc---cccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHH
Q 012233 277 HQLKICDFGSAKMLVPGEPNI---SYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEI 352 (468)
Q Consensus 277 ~~vkL~DFG~a~~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~~~i 352 (468)
.|||+|||+++.+-..+... ...-..+|||||.|... +|+.++|||||||+|||+++ |..||.+.++.+.+..|
T Consensus 641 -~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~-kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i 718 (774)
T KOG1026|consen 641 -VVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYG-KFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECI 718 (774)
T ss_pred -EEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcC-cccchhhhhhhhhhhhhhhccccCcccccchHHHHHHH
Confidence 89999999998764332211 22336799999999755 49999999999999999996 99999999998888776
Q ss_pred HHHhCCCCHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHh
Q 012233 353 IKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEAC 418 (468)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell 418 (468)
.+.- . + ..+..+|.++.+|+..||+.+|.+||++.||-
T Consensus 719 ~~g~----------------l--L----------~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~ 756 (774)
T KOG1026|consen 719 RAGQ----------------L--L----------SCPENCPTEVYSLMLECWNENPKRRPSFKEIH 756 (774)
T ss_pred HcCC----------------c--c----------cCCCCCCHHHHHHHHHHhhcCcccCCCHHHHH
Confidence 5520 0 1 13467999999999999999999999999873
No 350
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=2.8e-37 Score=298.34 Aligned_cols=243 Identities=21% Similarity=0.296 Sum_probs=185.7
Q ss_pred cceEEeceecccCceEEEEEEEcCCCCE----EEEEEeeccc-----chHHHHHHHHHHcCCCCcccccceeeecCCCCc
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLETGDS----VAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDE 207 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~----vaiK~~~~~~-----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 207 (468)
.+|++.+.||+|+||.||+|.+..+|.. +++|.+.... .....|+.+++.+.||||+++++++. +.
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-----~~ 81 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-----GA 81 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-----CC
Confidence 4699999999999999999999877764 6777664321 12335667788999999999999762 22
Q ss_pred eEEEEEeecccchHH-HHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecC
Q 012233 208 LYLNLVLEYISETVY-RVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGS 286 (468)
Q Consensus 208 ~~~~lv~e~~~~~ll-~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~ 286 (468)
..++++||+.++.+ +.+. .....+++..+..++.||+.||.|||+ +|++||||||+|||++.++ .+||+|||+
T Consensus 82 -~~~~i~e~~~~gsL~~~l~---~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~iiH~dlkp~nili~~~~-~~kl~Dfg~ 155 (279)
T cd05111 82 -SLQLVTQLSPLGSLLDHVR---QHRDSLDPQRLLNWCVQIAKGMYYLEE-HRMVHRNLAARNILLKSDS-IVQIADFGV 155 (279)
T ss_pred -ccEEEEEeCCCCcHHHHHH---hcccCCCHHHHHHHHHHHHHHHHHHHH-CCEeccccCcceEEEcCCC-cEEEcCCcc
Confidence 35689999986544 3332 223568899999999999999999998 8999999999999999887 799999999
Q ss_pred ccccCCCCC---CccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHH
Q 012233 287 AKMLVPGEP---NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTRE 362 (468)
Q Consensus 287 a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~ 362 (468)
++....... .....++..|+|||.+.+.. ++.++|||||||++|||++ |..||.+..... +.+++.....+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~-~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~-~~~~~~~~~~~--- 230 (279)
T cd05111 156 ADLLYPDDKKYFYSEHKTPIKWMALESILFGR-YTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHE-VPDLLEKGERL--- 230 (279)
T ss_pred ceeccCCCcccccCCCCCcccccCHHHhccCC-cCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH-HHHHHHCCCcC---
Confidence 986643322 12334667899999986544 8999999999999999998 999998765433 23332211000
Q ss_pred HHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 363 EIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
. .+...+.++.+++.+||..||.+|||+.+++.
T Consensus 231 ------------~------------~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~ 263 (279)
T cd05111 231 ------------A------------QPQICTIDVYMVMVKCWMIDENVRPTFKELAN 263 (279)
T ss_pred ------------C------------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 0 11235678999999999999999999999876
No 351
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=2.6e-37 Score=294.60 Aligned_cols=236 Identities=25% Similarity=0.342 Sum_probs=184.2
Q ss_pred ceecccCceEEEEEEEcCCC---CEEEEEEeecccc-----hHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEEEe
Q 012233 143 RVVGTGSFGVVFQAKCLETG---DSVAIKKVLQDKR-----YKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVL 214 (468)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~~g---~~vaiK~~~~~~~-----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv~ 214 (468)
+.||+|+||.||+|.+...+ ..||+|.+..... ...+|+.+++.+.|+||+++++++. .. ..++||
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~~-~~~~v~ 74 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-----GE-PLMLVM 74 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-----CC-ceEEEE
Confidence 46999999999999876554 7899998865443 3457899999999999999998762 22 368999
Q ss_pred ecccch-HHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCCC
Q 012233 215 EYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPG 293 (468)
Q Consensus 215 e~~~~~-ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~~ 293 (468)
||+.++ +.+.+. ....+++..+..++.|++.||.|||. .||+|+||||+|||++.++ .+||+|||+++.....
T Consensus 75 e~~~~~~L~~~l~----~~~~~~~~~~~~~~~qi~~~l~~lh~-~~i~H~di~p~nili~~~~-~~kl~df~~~~~~~~~ 148 (257)
T cd05060 75 ELAPLGPLLKYLK----KRREIPVSDLKELAHQVAMGMAYLES-KHFVHRDLAARNVLLVNRH-QAKISDFGMSRALGAG 148 (257)
T ss_pred EeCCCCcHHHHHH----hCCCCCHHHHHHHHHHHHHHHHHHhh-cCeeccCcccceEEEcCCC-cEEeccccccceeecC
Confidence 999865 444332 23468899999999999999999998 8999999999999999888 7999999999766433
Q ss_pred CCCc----cccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcC
Q 012233 294 EPNI----SYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEIKCMN 368 (468)
Q Consensus 294 ~~~~----~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 368 (468)
.... ...++..|+|||.+.+. .++.++|||||||++|+|++ |..||...+..+....+... .
T Consensus 149 ~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~-~----------- 215 (257)
T cd05060 149 SDYYRATTAGRWPLKWYAPECINYG-KFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESG-E----------- 215 (257)
T ss_pred CcccccccCccccccccCHHHhcCC-CCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcC-C-----------
Confidence 3211 12234679999998654 48999999999999999997 99999877655443333221 0
Q ss_pred CCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 369 PNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
. ...+..++..++++|.+||..||.+||++.++++
T Consensus 216 ------~----------~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~ 250 (257)
T cd05060 216 ------R----------LPRPEECPQEIYSIMLSCWKYRPEDRPTFSELES 250 (257)
T ss_pred ------c----------CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 0 0022347889999999999999999999999876
No 352
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=2.6e-37 Score=296.57 Aligned_cols=245 Identities=22% Similarity=0.291 Sum_probs=181.7
Q ss_pred eecccCceEEEEEEEcC--CCCEEEEEEeeccc-----chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEEEeec
Q 012233 144 VVGTGSFGVVFQAKCLE--TGDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVLEY 216 (468)
Q Consensus 144 ~lG~G~fg~Vy~~~~~~--~g~~vaiK~~~~~~-----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv~e~ 216 (468)
.||+|+||.||+|.... ....+|+|.+.... ..+.+|+.+++.++|+||+++++.+ ......|+||||
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~-----~~~~~~~lv~e~ 76 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQC-----IESIPYLLVLEF 76 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEE-----CCCCceEEEEEe
Confidence 58999999999997532 34578888764332 2345789999999999999999988 334458899999
Q ss_pred ccchHHH-HHhhhhh-cCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCCCC
Q 012233 217 ISETVYR-VSKHYTR-MNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGE 294 (468)
Q Consensus 217 ~~~~ll~-~~~~~~~-~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~~~ 294 (468)
++++.+. .+..... .....++..+..++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||++.......
T Consensus 77 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~-~~ivH~dlkp~Nill~~~~-~~kl~dfg~~~~~~~~~ 154 (269)
T cd05042 77 CPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQ-ADFIHSDLALRNCQLTADL-SVKIGDYGLALEQYPED 154 (269)
T ss_pred CCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHh-cCEecccccHhheEecCCC-cEEEeccccccccccch
Confidence 9875444 3332221 12334677788999999999999998 8999999999999999888 79999999986543221
Q ss_pred C---CccccccCCccccccccC------CCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHH
Q 012233 295 P---NISYICSRYYRAPELIFG------ATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEI 364 (468)
Q Consensus 295 ~---~~~~~gt~~y~aPE~~~~------~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 364 (468)
. .....+++.|+|||++.. ...++.++|||||||++|||++ |..||......+.+..++.....
T Consensus 155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~------ 228 (269)
T cd05042 155 YYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDI------ 228 (269)
T ss_pred heeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCc------
Confidence 1 122345678999998742 2346889999999999999998 88999877766655554432111
Q ss_pred hhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 365 KCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
.++ ...+...++..+.+++..|| .||.+|||+++++.
T Consensus 229 ----------~~~-------~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~ 265 (269)
T cd05042 229 ----------KLP-------KPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHE 265 (269)
T ss_pred ----------cCC-------CCcccccCCHHHHHHHHHHh-cCcccccCHHHHHH
Confidence 111 01133457888999999999 59999999999875
No 353
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=4.4e-38 Score=300.68 Aligned_cols=242 Identities=26% Similarity=0.362 Sum_probs=185.0
Q ss_pred EEeceecccCceEEEEEEEc----CCCCEEEEEEeecc-----cchHHHHHHHHHHcCCCCcccccceeeecCCCCceEE
Q 012233 140 MAERVVGTGSFGVVFQAKCL----ETGDSVAIKKVLQD-----KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYL 210 (468)
Q Consensus 140 ~~~~~lG~G~fg~Vy~~~~~----~~g~~vaiK~~~~~-----~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~ 210 (468)
.+.+.||.|.||.||+|.+. ..+..|+||.+... ...+.+|++++++++||||+++++++.... ..
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~-----~~ 76 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENE-----PL 76 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSS-----SE
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccc-----cc
Confidence 45678999999999999997 44677999998542 234557999999999999999999986322 27
Q ss_pred EEEeecccch-HHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccc
Q 012233 211 NLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (468)
Q Consensus 211 ~lv~e~~~~~-ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~ 289 (468)
++||||+.++ +.+.+... ....+++..+..++.||+.||.|||+ ++|+|+||++.||||+.++ .+||+|||++..
T Consensus 77 ~lv~e~~~~g~L~~~L~~~--~~~~~~~~~~~~i~~~i~~~l~~Lh~-~~iiH~~l~~~nill~~~~-~~Kl~~f~~~~~ 152 (259)
T PF07714_consen 77 FLVMEYCPGGSLDDYLKSK--NKEPLSEQQRLSIAIQIAEALSYLHS-NNIIHGNLSPSNILLDSNG-QVKLSDFGLSRP 152 (259)
T ss_dssp EEEEE--TTEBHHHHHHHT--CTTTSBHHHHHHHHHHHHHHHHHHHH-TTEEEST-SGGGEEEETTT-EEEEESTTTGEE
T ss_pred ccccccccccccccccccc--cccccccccccccccccccccccccc-ccccccccccccccccccc-cccccccccccc
Confidence 8999999865 44443332 24668999999999999999999998 8999999999999999888 899999999977
Q ss_pred cCCCCC---CccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHh
Q 012233 290 LVPGEP---NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEIK 365 (468)
Q Consensus 290 ~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 365 (468)
...... .....+...|+|||.+.+.. ++.++||||||+++|||++ |+.||...+..+....+.+...
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~~-~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~~-------- 223 (259)
T PF07714_consen 153 ISEKSKYKNDSSQQLPLRYLAPEVLKDGE-YTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQR-------- 223 (259)
T ss_dssp TTTSSSEEESTTSESGGGGS-HHHHHHSE-ESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTEE--------
T ss_pred ccccccccccccccccccccccccccccc-cccccccccccccccccccccccccccccccccccccccccc--------
Confidence 622211 22345677899999986654 8999999999999999999 7899988876665555533100
Q ss_pred hcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 366 CMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
..++..++..+.++|.+||..||.+|||+.++++
T Consensus 224 --------------------~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~ 257 (259)
T PF07714_consen 224 --------------------LPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQ 257 (259)
T ss_dssp --------------------TTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHH
T ss_pred --------------------ceeccchhHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 0123457899999999999999999999999874
No 354
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=3.8e-37 Score=292.72 Aligned_cols=242 Identities=27% Similarity=0.378 Sum_probs=191.3
Q ss_pred EEeceecccCceEEEEEEEcCCC----CEEEEEEeeccc-----chHHHHHHHHHHcCCCCcccccceeeecCCCCceEE
Q 012233 140 MAERVVGTGSFGVVFQAKCLETG----DSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYL 210 (468)
Q Consensus 140 ~~~~~lG~G~fg~Vy~~~~~~~g----~~vaiK~~~~~~-----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~ 210 (468)
.+.+.||.|+||.||+|.+...+ ..||+|.+.... ....+|+.+++.++|+||+++++++. +....
T Consensus 2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~ 76 (258)
T smart00219 2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCT-----EEEPL 76 (258)
T ss_pred cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEc-----CCCee
Confidence 46678999999999999998766 889999986443 24457999999999999999999883 33468
Q ss_pred EEEeecccchHHH-HHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccc
Q 012233 211 NLVLEYISETVYR-VSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (468)
Q Consensus 211 ~lv~e~~~~~ll~-~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~ 289 (468)
+++|||+.++.+. .+.... ...+++..+..++.|++.||.|||+ .|++|+||||+||+++.++ .++|+|||++..
T Consensus 77 ~~i~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~ql~~~l~~lh~-~~~~h~dl~~~nil~~~~~-~~~l~dfg~~~~ 152 (258)
T smart00219 77 MIVMEYMEGGDLLDYLRKNR--PKELSLSDLLSFALQIARGMEYLES-KNFIHRDLAARNCLVGENL-VVKISDFGLSRD 152 (258)
T ss_pred EEEEeccCCCCHHHHHHhhh--hccCCHHHHHHHHHHHHHHHHHHhc-CCeeecccccceEEEccCC-eEEEcccCCcee
Confidence 8999999875443 322211 1228999999999999999999998 8999999999999999887 799999999976
Q ss_pred cCCCCCCc--cccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHhh
Q 012233 290 LVPGEPNI--SYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEIKC 366 (468)
Q Consensus 290 ~~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 366 (468)
........ ...+++.|+|||.+.+ ..++.++|+|||||++|+|++ |++||...+..+....+.....
T Consensus 153 ~~~~~~~~~~~~~~~~~y~~Pe~~~~-~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~--------- 222 (258)
T smart00219 153 LYDDDYYKKKGGKLPIRWMAPESLKD-GKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGYR--------- 222 (258)
T ss_pred cccccccccccCCCcccccChHHhcc-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCC---------
Confidence 64432211 1336789999999854 458999999999999999998 8999987665555544432100
Q ss_pred cCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 367 MNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
...+..++.++.+++.+||..||.+|||+.++++
T Consensus 223 -------------------~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 256 (258)
T smart00219 223 -------------------LPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVE 256 (258)
T ss_pred -------------------CCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHh
Confidence 0022347889999999999999999999999986
No 355
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=2e-37 Score=298.66 Aligned_cols=236 Identities=18% Similarity=0.225 Sum_probs=179.9
Q ss_pred eecccCceEEEEEEEcCC------------------------CCEEEEEEeeccc----chHHHHHHHHHHcCCCCcccc
Q 012233 144 VVGTGSFGVVFQAKCLET------------------------GDSVAIKKVLQDK----RYKNRELQIMRLLNHPNVVSL 195 (468)
Q Consensus 144 ~lG~G~fg~Vy~~~~~~~------------------------g~~vaiK~~~~~~----~~~~~E~~il~~l~hpnIv~l 195 (468)
.||+|+||.||+|....+ ...||+|.+.... ..+.+|+.+++.++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 599999999999985322 2358888875432 234468889999999999999
Q ss_pred cceeeecCCCCceEEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCC
Q 012233 196 KHCFFSTTEKDELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPH 275 (468)
Q Consensus 196 ~~~~~~~~~~~~~~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~ 275 (468)
++++.. ..+.++||||++++.+..... .....+++..+..++.||+.||+|||+ +||+||||||+|||++..
T Consensus 82 ~~~~~~-----~~~~~lv~ey~~~g~L~~~l~--~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~iiH~dlkp~Nill~~~ 153 (274)
T cd05076 82 HGVCVR-----GSENIMVEEFVEHGPLDVCLR--KEKGRVPVAWKITVAQQLASALSYLED-KNLVHGNVCAKNILLARL 153 (274)
T ss_pred EEEEEe-----CCceEEEEecCCCCcHHHHHH--hcCCCCCHHHHHHHHHHHHHHHHHHHc-CCccCCCCCcccEEEecc
Confidence 998843 335789999999886654332 224568899999999999999999998 899999999999999754
Q ss_pred CC------cEEEeeecCccccCCCCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHH-hCCCCCCCCCcHHH
Q 012233 276 TH------QLKICDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELL-LGQPLFPGESGVDQ 348 (468)
Q Consensus 276 ~~------~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell-~G~~pf~~~~~~~~ 348 (468)
+. .+||+|||++...... ....++..|+|||.+.+...++.++|||||||++|||+ +|..||......+.
T Consensus 154 ~~~~~~~~~~kl~d~g~~~~~~~~---~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~ 230 (274)
T cd05076 154 GLAEGTSPFIKLSDPGVSFTALSR---EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEK 230 (274)
T ss_pred CcccCccceeeecCCccccccccc---cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHH
Confidence 31 3899999988644222 23457888999999876556899999999999999985 79999987654332
Q ss_pred HHHHHHHhCCCCHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCC
Q 012233 349 LVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAH 420 (468)
Q Consensus 349 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~h 420 (468)
.. .... ... ++...++++.++|.+||+.+|.+|||+.+++++
T Consensus 231 ~~-~~~~-----------------~~~------------~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~ 272 (274)
T cd05076 231 ER-FYEK-----------------KHR------------LPEPSCKELATLISQCLTYEPTQRPSFRTILRD 272 (274)
T ss_pred HH-HHHh-----------------ccC------------CCCCCChHHHHHHHHHcccChhhCcCHHHHHHh
Confidence 21 1110 000 112345789999999999999999999999864
No 356
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-38 Score=315.61 Aligned_cols=254 Identities=25% Similarity=0.311 Sum_probs=199.1
Q ss_pred CcccceEEeceecccCceEEEEEEEcCCCC---E-EEEEEeecc-------cchHHHHHHHHHHcCCCCcccccceeeec
Q 012233 134 KQTISYMAERVVGTGSFGVVFQAKCLETGD---S-VAIKKVLQD-------KRYKNRELQIMRLLNHPNVVSLKHCFFST 202 (468)
Q Consensus 134 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~g~---~-vaiK~~~~~-------~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 202 (468)
....+-.+.+.||+|+||.||+|..+..+. . ||+|..... ...+.+|.++|++++|||||++||+.
T Consensus 154 l~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa--- 230 (474)
T KOG0194|consen 154 LSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVA--- 230 (474)
T ss_pred EeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEE---
Confidence 334455566899999999999999865433 3 899987642 23345799999999999999999988
Q ss_pred CCCCceEEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEe
Q 012233 203 TEKDELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKIC 282 (468)
Q Consensus 203 ~~~~~~~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~ 282 (468)
.+..-++||||+|.||.|.. +..+....++..+...++.+.+.||+|||. +++|||||-.+|+|++.++ .+||+
T Consensus 231 --~~~~Pl~ivmEl~~gGsL~~--~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~-k~~IHRDIAARNcL~~~~~-~vKIS 304 (474)
T KOG0194|consen 231 --VLEEPLMLVMELCNGGSLDD--YLKKNKKSLPTLEKLRFCYDAARGLEYLHS-KNCIHRDIAARNCLYSKKG-VVKIS 304 (474)
T ss_pred --cCCCccEEEEEecCCCcHHH--HHHhCCCCCCHHHHHHHHHHHHhHHHHHHH-CCCcchhHhHHHheecCCC-eEEeC
Confidence 34445889999999875542 222333469999999999999999999998 9999999999999999877 68999
Q ss_pred eecCccccCCCCCCccc-cccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCC
Q 012233 283 DFGSAKMLVPGEPNISY-ICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPT 360 (468)
Q Consensus 283 DFG~a~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~ 360 (468)
|||+++........... --...|+|||.+... .|+.++|||||||++||+++ |..||.+....+...+|+.....
T Consensus 305 DFGLs~~~~~~~~~~~~~klPirWLAPEtl~~~-~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~r-- 381 (474)
T KOG0194|consen 305 DFGLSRAGSQYVMKKFLKKLPIRWLAPETLNTG-IFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGYR-- 381 (474)
T ss_pred ccccccCCcceeeccccccCcceecChhhhccC-ccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCcc--
Confidence 99998754322222212 246789999999655 69999999999999999998 89999999988888887542111
Q ss_pred HHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCC
Q 012233 361 REEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDL 426 (468)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~ 426 (468)
...+...+.++..++.+||..||+.||++.++.+ +++.+
T Consensus 382 -------------------------~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~--~l~~~ 420 (474)
T KOG0194|consen 382 -------------------------MPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKK--KLEAL 420 (474)
T ss_pred -------------------------CCCCCCCHHHHHHHHHHhccCChhhccCHHHHHH--HHHHH
Confidence 1133457889999999999999999999998876 44443
No 357
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.4e-38 Score=321.11 Aligned_cols=264 Identities=25% Similarity=0.383 Sum_probs=217.6
Q ss_pred CCcccceEEeceecccCceEEEEEEEcCCCCEEEEEEeecc---cchHHHHHHHHHHc-CCCCcccccceeeecCCCCce
Q 012233 133 PKQTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD---KRYKNRELQIMRLL-NHPNVVSLKHCFFSTTEKDEL 208 (468)
Q Consensus 133 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~---~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~~~ 208 (468)
+...+-|.+.++||.|.+|.||+++.+.+|+..|+|+..-+ ....+.|.+||+.+ .|||++.+|++|+........
T Consensus 15 pdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~D 94 (953)
T KOG0587|consen 15 PDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGD 94 (953)
T ss_pred CCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCC
Confidence 34455699999999999999999999999999999987443 34455688888887 499999999999887766677
Q ss_pred EEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCcc
Q 012233 209 YLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAK 288 (468)
Q Consensus 209 ~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~ 288 (468)
.++||||||++|....+-.... +..+.+..+..|++.++.||.+||+ ..++|||||-.|||++.++ .|||+|||.+.
T Consensus 95 qLWLVMEfC~gGSVTDLVKn~~-g~rl~E~~IaYI~re~lrgl~HLH~-nkviHRDikG~NiLLT~e~-~VKLvDFGvSa 171 (953)
T KOG0587|consen 95 QLWLVMEFCGGGSVTDLVKNTK-GNRLKEEWIAYILREILRGLAHLHN-NKVIHRDIKGQNVLLTENA-EVKLVDFGVSA 171 (953)
T ss_pred eEEEEeeccCCccHHHHHhhhc-ccchhhHHHHHHHHHHHHHHHHHhh-cceeeecccCceEEEeccC-cEEEeeeeeee
Confidence 8999999999765544433333 7889999999999999999999998 8999999999999999998 79999999998
Q ss_pred ccCCC-CCCccccccCCccccccccCCC----CCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHH
Q 012233 289 MLVPG-EPNISYICSRYYRAPELIFGAT----EYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREE 363 (468)
Q Consensus 289 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~----~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~ 363 (468)
.+... ....+.+|||+|||||++.... .|+..+|+||||++..||--|.+|+-+..+...+..|.. .|++..
T Consensus 172 QldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~IpR---NPPPkL 248 (953)
T KOG0587|consen 172 QLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPR---NPPPKL 248 (953)
T ss_pred eeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccCCC---CCCccc
Confidence 77543 3456889999999999995432 377899999999999999999999988777666655433 222211
Q ss_pred HhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCC
Q 012233 364 IKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDD 425 (468)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~ 425 (468)
. -++.-+.++.+||..||.+|-.+||+..++|.|||+++
T Consensus 249 k-----------------------rp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi~e 287 (953)
T KOG0587|consen 249 K-----------------------RPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHPFITE 287 (953)
T ss_pred c-----------------------chhhHHHHHHHHHHHHHhhccccCcchhhhccCCcccc
Confidence 1 12345778999999999999999999999999999984
No 358
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=1.9e-37 Score=296.67 Aligned_cols=237 Identities=18% Similarity=0.216 Sum_probs=179.6
Q ss_pred ceecccCceEEEEEEEcC------------CCCEEEEEEeecccc----hHHHHHHHHHHcCCCCcccccceeeecCCCC
Q 012233 143 RVVGTGSFGVVFQAKCLE------------TGDSVAIKKVLQDKR----YKNRELQIMRLLNHPNVVSLKHCFFSTTEKD 206 (468)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~------------~g~~vaiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 206 (468)
+.||+|+||.||+|.... ....|++|.+..... .+.+|+.+++.++||||+++++++. +
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~-----~ 75 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCV-----R 75 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEe-----c
Confidence 368999999999998532 223588887644322 3456888999999999999999873 3
Q ss_pred ceEEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCC------cEE
Q 012233 207 ELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTH------QLK 280 (468)
Q Consensus 207 ~~~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~------~vk 280 (468)
....++||||++++.+..... .....+++..++.++.||+.||.|||+ +||+||||||+|||++.++. .++
T Consensus 76 ~~~~~lv~e~~~~~~l~~~~~--~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~ivH~dlkp~Nill~~~~~~~~~~~~~~ 152 (262)
T cd05077 76 DVENIMVEEFVEFGPLDLFMH--RKSDVLTTPWKFKVAKQLASALSYLED-KDLVHGNVCTKNILLAREGIDGECGPFIK 152 (262)
T ss_pred CCCCEEEEecccCCCHHHHHH--hcCCCCCHHHHHHHHHHHHHHHHHhhh-CCeECCCCCcccEEEecCCccCCCCceeE
Confidence 334789999999877665432 223568999999999999999999998 89999999999999986552 289
Q ss_pred EeeecCccccCCCCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHH-hCCCCCCCCCcHHHHHHHHHHhCCC
Q 012233 281 ICDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELL-LGQPLFPGESGVDQLVEIIKILGTP 359 (468)
Q Consensus 281 L~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell-~G~~pf~~~~~~~~~~~i~~~~~~~ 359 (468)
++|||++..... .....++..|+|||.+.+...++.++|||||||++|||+ .|..||......+.. .... .
T Consensus 153 l~d~g~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~-~~~~---~- 224 (262)
T cd05077 153 LSDPGIPITVLS---RQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKE-RFYE---G- 224 (262)
T ss_pred eCCCCCCccccC---cccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHH-HHHh---c-
Confidence 999999865432 224567889999998865556899999999999999998 588888765432211 1111 0
Q ss_pred CHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCC
Q 012233 360 TREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAH 420 (468)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~h 420 (468)
... .....++++.+||.+||+.||.+||++.+++++
T Consensus 225 -------------~~~------------~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~ 260 (262)
T cd05077 225 -------------QCM------------LVTPSCKELADLMTHCMNYDPNQRPFFRAIMRD 260 (262)
T ss_pred -------------Ccc------------CCCCChHHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence 000 111245789999999999999999999999874
No 359
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=4.3e-37 Score=292.65 Aligned_cols=243 Identities=20% Similarity=0.315 Sum_probs=191.3
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc---chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEEEe
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK---RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVL 214 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~---~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv~ 214 (468)
.|.+.+.||.|+||.||+|.+. .+..+|+|.+.... ..+.+|+++++.++||||+++++++ ......++||
T Consensus 5 ~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~~v~ 78 (256)
T cd05112 5 ELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAMSEEDFIEEAQVMMKLSHPKLVQLYGVC-----TERSPICLVF 78 (256)
T ss_pred HeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCCCHHHHHHHHHHHHhCCCCCeeeEEEEE-----ccCCceEEEE
Confidence 5899999999999999999875 47789999886432 3456799999999999999999887 4444688999
Q ss_pred ecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCCCC
Q 012233 215 EYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGE 294 (468)
Q Consensus 215 e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~~~ 294 (468)
||+.++.+..... .....+++..++.++.|++.||+|||+ .|++|+||||+||+++.++ .++|+|||.+.......
T Consensus 79 e~~~~~~L~~~~~--~~~~~~~~~~~~~~~~~l~~~l~~lH~-~~i~h~dl~p~ni~i~~~~-~~~l~d~g~~~~~~~~~ 154 (256)
T cd05112 79 EFMEHGCLSDYLR--AQRGKFSQETLLGMCLDVCEGMAYLES-SNVIHRDLAARNCLVGENQ-VVKVSDFGMTRFVLDDQ 154 (256)
T ss_pred EcCCCCcHHHHHH--hCccCCCHHHHHHHHHHHHHHHHHHHH-CCccccccccceEEEcCCC-eEEECCCcceeecccCc
Confidence 9999775543222 223457888999999999999999998 8999999999999999877 79999999987553322
Q ss_pred C--CccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCC
Q 012233 295 P--NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNY 371 (468)
Q Consensus 295 ~--~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 371 (468)
. .....++..|+|||.+.+. .++.++|||||||++|||++ |..||......+....+....
T Consensus 155 ~~~~~~~~~~~~~~aPe~~~~~-~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~--------------- 218 (256)
T cd05112 155 YTSSTGTKFPVKWSSPEVFSFS-KYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGF--------------- 218 (256)
T ss_pred ccccCCCccchhhcCHhHhccC-CcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCC---------------
Confidence 1 1123346789999998654 48999999999999999998 999998766554444332100
Q ss_pred ccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 372 TEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
. ...+...+..+.+|+.+||+.+|.+|||+.++++
T Consensus 219 ---~----------~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~ 253 (256)
T cd05112 219 ---R----------LYKPRLASQSVYELMQHCWKERPEDRPSFSLLLH 253 (256)
T ss_pred ---C----------CCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence 0 0012235789999999999999999999999986
No 360
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=3.9e-37 Score=296.24 Aligned_cols=249 Identities=23% Similarity=0.306 Sum_probs=192.1
Q ss_pred cceEEeceecccCceEEEEEEEcC-----CCCEEEEEEeecccc-----hHHHHHHHHHHcCCCCcccccceeeecCCCC
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLE-----TGDSVAIKKVLQDKR-----YKNRELQIMRLLNHPNVVSLKHCFFSTTEKD 206 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~-----~g~~vaiK~~~~~~~-----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 206 (468)
.+|.+.+.||.|+||.||+|+++. ..+.|++|.+..... ...+|+.++++++|+||+++++++ .+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~ 79 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLC-----RE 79 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEE-----CC
Confidence 369999999999999999999754 346799998754332 356799999999999999999987 44
Q ss_pred ceEEEEEeecccchHHH-HHhhhhhc-----CCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEE
Q 012233 207 ELYLNLVLEYISETVYR-VSKHYTRM-----NQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLK 280 (468)
Q Consensus 207 ~~~~~lv~e~~~~~ll~-~~~~~~~~-----~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vk 280 (468)
..+.|+||||++++.+. .+...... ...+++..+..++.||+.||.|||+ .||+||||||+|||++.++ .++
T Consensus 80 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~-~~i~H~dlkp~Nili~~~~-~~~ 157 (275)
T cd05046 80 AEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSN-ARFVHRDLAARNCLVSSQR-EVK 157 (275)
T ss_pred CCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhh-cCcccCcCccceEEEeCCC-cEE
Confidence 45689999999865444 33322111 1158999999999999999999998 8999999999999999888 799
Q ss_pred EeeecCccccCCCC--CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhC
Q 012233 281 ICDFGSAKMLVPGE--PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILG 357 (468)
Q Consensus 281 L~DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~ 357 (468)
|+|||++....... ......++..|+|||.+.+.. ++.++|||||||++|+|++ |..||........+..+..
T Consensus 158 l~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~-~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~--- 233 (275)
T cd05046 158 VSLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDD-FSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQA--- 233 (275)
T ss_pred EcccccccccCcccccccCCceeEEeecChhhhccCC-CCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHc---
Confidence 99999986543221 222345677899999986544 7899999999999999998 8899976654443333221
Q ss_pred CCCHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCC
Q 012233 358 TPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAH 420 (468)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~h 420 (468)
....++ .+..++..+.++|.+||+.||.+||++.+++.+
T Consensus 234 --------------~~~~~~----------~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~ 272 (275)
T cd05046 234 --------------GKLELP----------VPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSA 272 (275)
T ss_pred --------------CCcCCC----------CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence 000110 123478899999999999999999999999863
No 361
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=3.1e-37 Score=298.48 Aligned_cols=261 Identities=25% Similarity=0.338 Sum_probs=187.7
Q ss_pred ceEEeceecccCceEEEEEEE----cCCCCEEEEEEeeccc----chHHHHHHHHHHcCCCCcccccceeeecCCCCceE
Q 012233 138 SYMAERVVGTGSFGVVFQAKC----LETGDSVAIKKVLQDK----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELY 209 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~----~~~g~~vaiK~~~~~~----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~ 209 (468)
+|++.+.||+|+||.||+|.. ..++..||+|.+.... ..+.+|+++++.++||||+++++++... +...
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~---~~~~ 81 (284)
T cd05081 5 HLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSA---GRRN 81 (284)
T ss_pred cceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccC---CCCc
Confidence 599999999999999999974 4578899999985432 2446799999999999999999876543 2335
Q ss_pred EEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccc
Q 012233 210 LNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (468)
Q Consensus 210 ~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~ 289 (468)
+++||||++++.+..... .....+++..++.++.|++.||+|||+ +||+||||||+|||++.++ .+||+|||++..
T Consensus 82 ~~lv~e~~~~~~L~~~l~--~~~~~l~~~~~~~~~~~l~~aL~~LH~-~~i~H~dlkp~nili~~~~-~~~l~dfg~~~~ 157 (284)
T cd05081 82 LRLVMEYLPYGSLRDYLQ--KHRERLDHRKLLLYASQICKGMEYLGS-KRYVHRDLATRNILVESEN-RVKIGDFGLTKV 157 (284)
T ss_pred eEEEEEecCCCCHHHHHH--hcCcCCCHHHHHHHHHHHHHHHHHHHH-CCceeccCCHhhEEECCCC-eEEECCCccccc
Confidence 789999998654432221 223457889999999999999999998 8999999999999999888 799999999987
Q ss_pred cCCCCCC----ccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhC-CCCHHHH
Q 012233 290 LVPGEPN----ISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILG-TPTREEI 364 (468)
Q Consensus 290 ~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~-~~~~~~~ 364 (468)
....... ....++..|+|||++.+. .++.++|||||||++|||++|..++...... ....+..... ......+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~~l~el~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 235 (284)
T cd05081 158 LPQDKEYYKVREPGESPIFWYAPESLTES-KFSVASDVWSFGVVLYELFTYSDKSCSPPAE-FMRMMGNDKQGQMIVYHL 235 (284)
T ss_pred ccCCCcceeecCCCCCceEeeCHHHhccC-CcChHHHHHHHHHHHHHHhhcCCcCCCcchh-hhhhcccccccccchHHH
Confidence 6433221 112234569999998654 4899999999999999999998776443211 1000000000 0000000
Q ss_pred hhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 365 KCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
..... ....+ ..+..++.++.+||.+||..+|++|||+.+++.
T Consensus 236 ~~~~~--~~~~~----------~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05081 236 IELLK--NNGRL----------PAPPGCPAEIYAIMKECWNNDPSQRPSFSELAL 278 (284)
T ss_pred HHHHh--cCCcC----------CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 00000 00000 123457889999999999999999999999976
No 362
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=5.4e-37 Score=294.29 Aligned_cols=248 Identities=23% Similarity=0.387 Sum_probs=193.9
Q ss_pred eEEeceecccCceEEEEEEEcC-CCCEEEEEEeeccc--------------chHHHHHHHHHH-cCCCCcccccceeeec
Q 012233 139 YMAERVVGTGSFGVVFQAKCLE-TGDSVAIKKVLQDK--------------RYKNRELQIMRL-LNHPNVVSLKHCFFST 202 (468)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~~~~-~g~~vaiK~~~~~~--------------~~~~~E~~il~~-l~hpnIv~l~~~~~~~ 202 (468)
|.+.+.||+|+||.||+|.+.. +++.+|+|.+.... ....+|+.++.+ ++||||+++++++
T Consensus 2 y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~--- 78 (269)
T cd08528 2 YAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTF--- 78 (269)
T ss_pred chhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeE---
Confidence 7888999999999999999977 67899999874221 112357776654 7899999999988
Q ss_pred CCCCceEEEEEeecccch-HHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEE
Q 012233 203 TEKDELYLNLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKI 281 (468)
Q Consensus 203 ~~~~~~~~~lv~e~~~~~-ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL 281 (468)
....+.++||||+.++ +.+.+.........+++..++.++.|++.||.|||+..||+|+||||+|||++.++ .++|
T Consensus 79 --~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~-~~~l 155 (269)
T cd08528 79 --LENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDD-KVTI 155 (269)
T ss_pred --ccCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCC-cEEE
Confidence 4445689999999864 44444433344567899999999999999999999536899999999999999888 7999
Q ss_pred eeecCccccCCCCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCH
Q 012233 282 CDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTR 361 (468)
Q Consensus 282 ~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~ 361 (468)
+|||.+.............++..|+|||.+.+.. ++.++|+||||+++|+|++|..||...........+......+
T Consensus 156 ~dfg~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~-~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-- 232 (269)
T cd08528 156 TDFGLAKQKQPESKLTSVVGTILYSCPEIVKNEP-YGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYEP-- 232 (269)
T ss_pred ecccceeecccccccccccCcccCcChhhhcCCC-CchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCCc--
Confidence 9999997665444444567889999999997644 8999999999999999999999997665544444333211100
Q ss_pred HHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCC
Q 012233 362 EEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAH 420 (468)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~h 420 (468)
.....+++.+.++|.+||+.||.+||++.|+..+
T Consensus 233 -------------------------~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~ 266 (269)
T cd08528 233 -------------------------LPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAM 266 (269)
T ss_pred -------------------------CCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHH
Confidence 0112467899999999999999999999998653
No 363
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=4.9e-37 Score=291.23 Aligned_cols=238 Identities=23% Similarity=0.333 Sum_probs=184.6
Q ss_pred ceecccCceEEEEEEEcCCCCEEEEEEeeccc-----chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEEEeecc
Q 012233 143 RVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVLEYI 217 (468)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv~e~~ 217 (468)
++||+|+||.||+|.. .++..||+|.+.... ..+.+|+.+++.++||||+++++++. .....++||||+
T Consensus 1 ~~ig~g~~g~vy~~~~-~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~lv~e~~ 74 (250)
T cd05085 1 ELLGKGNFGEVFKGTL-KDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCT-----QRQPIYIVMELV 74 (250)
T ss_pred CccCCCCCceEEEEEe-cCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEe-----cCCccEEEEECC
Confidence 3689999999999985 468899999875432 23457999999999999999999873 334588999999
Q ss_pred cchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCCCCCC-
Q 012233 218 SETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGEPN- 296 (468)
Q Consensus 218 ~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~~~~~- 296 (468)
+++.+.... ......+++..+..++.|++.||.|||+ +|++|+||||+||+++.++ .+||+|||++.........
T Consensus 75 ~~~~L~~~~--~~~~~~~~~~~~~~~~~~i~~~l~~lH~-~~~~H~dl~p~nili~~~~-~~~l~d~g~~~~~~~~~~~~ 150 (250)
T cd05085 75 PGGDFLSFL--RKKKDELKTKQLVKFALDAAAGMAYLES-KNCIHRDLAARNCLVGENN-VLKISDFGMSRQEDDGIYSS 150 (250)
T ss_pred CCCcHHHHH--HhcCCCCCHHHHHHHHHHHHHHHHHHHh-CCeeecccChheEEEcCCC-eEEECCCccceecccccccc
Confidence 876443322 2223457889999999999999999998 8999999999999999887 7999999998754332211
Q ss_pred -ccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCCccC
Q 012233 297 -ISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEF 374 (468)
Q Consensus 297 -~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 374 (468)
....++..|+|||++.+. .++.++|||||||++|+|++ |..||...........+.... .
T Consensus 151 ~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~----------------~- 212 (250)
T cd05085 151 SGLKQIPIKWTAPEALNYG-RYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGY----------------R- 212 (250)
T ss_pred CCCCCCcccccCHHHhccC-CCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCC----------------C-
Confidence 122335679999998654 48999999999999999998 999998776554433332200 0
Q ss_pred CCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 375 KFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
..++..++.++.+|+.+||..+|.+||++.+++.
T Consensus 213 -----------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 246 (250)
T cd05085 213 -----------MSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQK 246 (250)
T ss_pred -----------CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 0122347889999999999999999999999875
No 364
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=3.2e-37 Score=300.44 Aligned_cols=253 Identities=21% Similarity=0.278 Sum_probs=188.5
Q ss_pred ceEEeceecccCceEEEEEEEcC----------------CCCEEEEEEeeccc-----chHHHHHHHHHHcCCCCccccc
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLE----------------TGDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLK 196 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~----------------~g~~vaiK~~~~~~-----~~~~~E~~il~~l~hpnIv~l~ 196 (468)
+|.+.+.||+|+||.||++.+.. ++..||+|.+.... ..+.+|+.+++.++|+||++++
T Consensus 6 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~ 85 (296)
T cd05095 6 RLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRLL 85 (296)
T ss_pred hceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEE
Confidence 59999999999999999986532 34468999886432 2345799999999999999999
Q ss_pred ceeeecCCCCceEEEEEeecccch-HHHHHhhhhh-------cCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCC
Q 012233 197 HCFFSTTEKDELYLNLVLEYISET-VYRVSKHYTR-------MNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQ 268 (468)
Q Consensus 197 ~~~~~~~~~~~~~~~lv~e~~~~~-ll~~~~~~~~-------~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~ 268 (468)
+++. .....++||||+.++ +...+..... ....+++..+..++.||+.||.|||+ +||+|+||||+
T Consensus 86 ~~~~-----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~-~~i~H~dlkp~ 159 (296)
T cd05095 86 AVCI-----TSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSS-LNFVHRDLATR 159 (296)
T ss_pred EEEe-----cCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHH-CCeecccCChh
Confidence 9883 334588999999865 4443332211 11346778899999999999999998 89999999999
Q ss_pred CeeecCCCCcEEEeeecCccccCCCCC---CccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh--CCCCCCCC
Q 012233 269 NLLVNPHTHQLKICDFGSAKMLVPGEP---NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL--GQPLFPGE 343 (468)
Q Consensus 269 NILl~~~~~~vkL~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~--G~~pf~~~ 343 (468)
|||++.++ .++|+|||+++.+..... .....+++.|++||+..+.. ++.++|+|||||++|||++ |..||...
T Consensus 160 Nili~~~~-~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~-~~~~~DiwSlG~~l~el~~~~~~~p~~~~ 237 (296)
T cd05095 160 NCLVGKNY-TIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGK-FTTASDVWAFGVTLWEILTLCKEQPYSQL 237 (296)
T ss_pred eEEEcCCC-CEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCC-ccchhhhhHHHHHHHHHHHhCCCCCcccc
Confidence 99999887 799999999976533221 11233467899999886554 8999999999999999998 78999776
Q ss_pred CcHHHHHHHHHHhCCCCHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 344 SGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 344 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
+..+.+......... ......++ .+..+++.+.+||.+||+.||.+||++.++++
T Consensus 238 ~~~~~~~~~~~~~~~-----------~~~~~~~~----------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~ 292 (296)
T cd05095 238 SDEQVIENTGEFFRD-----------QGRQVYLP----------KPALCPDSLYKLMLSCWRRNAKERPSFQEIHA 292 (296)
T ss_pred ChHHHHHHHHHHHhh-----------ccccccCC----------CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 655544332221100 00000011 12346789999999999999999999999864
No 365
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=6.3e-37 Score=294.01 Aligned_cols=246 Identities=20% Similarity=0.219 Sum_probs=181.1
Q ss_pred ceecccCceEEEEEEEc--CCCCEEEEEEeeccc-----chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEEEee
Q 012233 143 RVVGTGSFGVVFQAKCL--ETGDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVLE 215 (468)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~--~~g~~vaiK~~~~~~-----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv~e 215 (468)
+.||+|+||.||+|.+. .++..+|+|.+.... ....+|+.+++.++||||+++++++ .+...+++|||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~~lv~e 75 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQC-----TEVTPYLLVME 75 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEE-----cCCCCcEEEEE
Confidence 36899999999999864 345679999875432 2345699999999999999999987 34445889999
Q ss_pred cccchHHH-HHhhhhh-cCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCCC
Q 012233 216 YISETVYR-VSKHYTR-MNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPG 293 (468)
Q Consensus 216 ~~~~~ll~-~~~~~~~-~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~~ 293 (468)
|++++.+. .+..... .....++..+..++.|++.||+|||+ .|++|+||||+||+++.++ .+||+|||++......
T Consensus 76 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~-~~i~H~dlkp~nil~~~~~-~~kL~dfg~~~~~~~~ 153 (269)
T cd05087 76 FCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHK-NNFIHSDLALRNCLLTADL-TVKIGDYGLSHNKYKE 153 (269)
T ss_pred CCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHH-CCEeccccCcceEEEcCCC-cEEECCccccccccCc
Confidence 99965443 3332221 12345667788899999999999998 8999999999999999887 7999999998654322
Q ss_pred CC---CccccccCCccccccccCCC------CCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHH
Q 012233 294 EP---NISYICSRYYRAPELIFGAT------EYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREE 363 (468)
Q Consensus 294 ~~---~~~~~gt~~y~aPE~~~~~~------~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~ 363 (468)
.. .....++..|+|||++.+.. .++.++|+|||||++|||++ |..||......+.........
T Consensus 154 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~------- 226 (269)
T cd05087 154 DYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQ------- 226 (269)
T ss_pred ceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcc-------
Confidence 21 12345678899999985321 35789999999999999996 999998766555433322210
Q ss_pred HhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 364 IKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
...++. ..+....++.+.+++.+|+ .+|.+|||+.+++.
T Consensus 227 ---------~~~~~~-------~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~ 265 (269)
T cd05087 227 ---------QLKLPK-------PRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHL 265 (269)
T ss_pred ---------cCCCCC-------CccCCCCChHHHHHHHHHh-cCcccCCCHHHHHH
Confidence 000000 0112236778999999999 68999999999874
No 366
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=4.8e-37 Score=296.44 Aligned_cols=244 Identities=24% Similarity=0.319 Sum_probs=190.9
Q ss_pred cceEEeceecccCceEEEEEEEcCCCC----EEEEEEeeccc-----chHHHHHHHHHHcCCCCcccccceeeecCCCCc
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLETGD----SVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDE 207 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~----~vaiK~~~~~~-----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 207 (468)
.+|++.+.||+|+||.||+|.++.+|. .+|+|.+.... ....+|+.+++.++||||+++++++..
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------ 80 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS------ 80 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec------
Confidence 469999999999999999999877665 58999875443 234579999999999999999998753
Q ss_pred eEEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCc
Q 012233 208 LYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSA 287 (468)
Q Consensus 208 ~~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a 287 (468)
...++||||+.++.+.... ......+++..+..++.||+.||+|||+ +||+|+||||+|||++.++ .+||+|||++
T Consensus 81 ~~~~~v~e~~~~g~L~~~l--~~~~~~~~~~~~~~~~~qi~~~l~~LH~-~~i~H~di~p~nil~~~~~-~~kL~dfg~~ 156 (279)
T cd05057 81 SQVQLITQLMPLGCLLDYV--RNHKDNIGSQYLLNWCVQIAKGMSYLEE-KRLVHRDLAARNVLVKTPQ-HVKITDFGLA 156 (279)
T ss_pred CceEEEEecCCCCcHHHHH--HhccCCCCHHHHHHHHHHHHHHHHHHHh-CCEEecccCcceEEEcCCC-eEEECCCccc
Confidence 2478999999865443222 2223458899999999999999999998 9999999999999999887 7999999999
Q ss_pred cccCCCCCCcc---ccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHH
Q 012233 288 KMLVPGEPNIS---YICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREE 363 (468)
Q Consensus 288 ~~~~~~~~~~~---~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~ 363 (468)
+.......... ..++..|+|||.+... .++.++|+|||||++||+++ |..||.+....+....+... .
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~-~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-~------ 228 (279)
T cd05057 157 KLLDVDEKEYHAEGGKVPIKWMALESILHR-IYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKG-E------ 228 (279)
T ss_pred ccccCcccceecCCCcccccccCHHHhhcC-CcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCC-C------
Confidence 87653332221 2235679999998644 48999999999999999998 99999887655443333220 0
Q ss_pred HhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 364 IKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
... .+...+.++.+++.+||..||..||++.++++
T Consensus 229 ---------~~~------------~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~ 263 (279)
T cd05057 229 ---------RLP------------QPPICTIDVYMVLVKCWMIDAESRPTFKELIN 263 (279)
T ss_pred ---------CCC------------CCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 000 12346788999999999999999999999876
No 367
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=1.2e-37 Score=297.34 Aligned_cols=237 Identities=19% Similarity=0.266 Sum_probs=180.8
Q ss_pred ceecccCceEEEEEEEcCCCCE-------EEEEEeeccc----chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEE
Q 012233 143 RVVGTGSFGVVFQAKCLETGDS-------VAIKKVLQDK----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (468)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~~g~~-------vaiK~~~~~~----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~ 211 (468)
+.||.|+||.||+|.+...+.. ||+|.+.... ....+|+.+++.+.||||+++++++... ...+
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~-----~~~~ 75 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCG-----DESI 75 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeC-----CCcE
Confidence 3699999999999998655443 8888775432 2345688999999999999999988543 3478
Q ss_pred EEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCc-------EEEeee
Q 012233 212 LVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQ-------LKICDF 284 (468)
Q Consensus 212 lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~-------vkL~DF 284 (468)
+||||+.++.+..... .....+++..+..++.||+.||+|||+ +||+||||||+|||++.++.. ++++||
T Consensus 76 lv~e~~~~g~L~~~l~--~~~~~~~~~~~~~~~~qi~~~l~~lH~-~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~ 152 (258)
T cd05078 76 MVQEYVKFGSLDTYLK--KNKNLINISWKLEVAKQLAWALHFLED-KGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDP 152 (258)
T ss_pred EEEecCCCCcHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCccceEEEecccccccCCCceEEeccc
Confidence 9999999875543322 223457888999999999999999998 899999999999999876532 799999
Q ss_pred cCccccCCCCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhC-CCCCCCCCcHHHHHHHHHHhCCCCHHH
Q 012233 285 GSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLG-QPLFPGESGVDQLVEIIKILGTPTREE 363 (468)
Q Consensus 285 G~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G-~~pf~~~~~~~~~~~i~~~~~~~~~~~ 363 (468)
|.+..... .....++..|+|||++.+...++.++|||||||++|+|++| ..||...+...... ....
T Consensus 153 g~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~-~~~~-------- 220 (258)
T cd05078 153 GISITVLP---KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQ-FYED-------- 220 (258)
T ss_pred ccccccCC---chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHH-HHHc--------
Confidence 99865432 22456788999999997655588999999999999999998 46665544333221 1110
Q ss_pred HhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCC
Q 012233 364 IKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAH 420 (468)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~h 420 (468)
... ++...+.++.+||.+||+.||.+|||+.++++.
T Consensus 221 ---------~~~------------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 256 (258)
T cd05078 221 ---------RHQ------------LPAPKWTELANLINQCMDYEPDFRPSFRAIIRD 256 (258)
T ss_pred ---------ccc------------CCCCCcHHHHHHHHHHhccChhhCCCHHHHHHh
Confidence 001 223356789999999999999999999999863
No 368
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-39 Score=290.66 Aligned_cols=265 Identities=24% Similarity=0.358 Sum_probs=205.6
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeecccc-----hHHHHHHH-HHHcCCCCcccccceeeecCCCCceEEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKR-----YKNRELQI-MRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~~-----~~~~E~~i-l~~l~hpnIv~l~~~~~~~~~~~~~~~~ 211 (468)
+.+-+..||.|+||+|++-.++.+|+..|||.+..... .+..|.+. ++.-+.||||++|+..+..++ .+
T Consensus 65 ~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGd-----cW 139 (361)
T KOG1006|consen 65 NLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGD-----CW 139 (361)
T ss_pred hHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCc-----ee
Confidence 34455679999999999999999999999999854332 22335443 455579999999999876554 88
Q ss_pred EEeecccchHHHHHh-hhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCcccc
Q 012233 212 LVLEYISETVYRVSK-HYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (468)
Q Consensus 212 lv~e~~~~~ll~~~~-~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~ 290 (468)
|.||+|.-++-.+.+ .+...+..+++..+..+....+.||.||.+...|||||+||+||||+..| .|||||||++-.+
T Consensus 140 iCMELMd~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G-~vKLCDFGIcGqL 218 (361)
T KOG1006|consen 140 ICMELMDISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHG-DVKLCDFGICGQL 218 (361)
T ss_pred eeHHHHhhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCC-CEeeecccchHhH
Confidence 999999865443322 23344677899999999999999999998778999999999999999999 7999999999877
Q ss_pred CCCCCCccccccCCccccccccCCCC-CCcchhHHHHHHHHHHHHhCCCCCCCCCc-HHHHHHHHHHhCCCCHHHHhhcC
Q 012233 291 VPGEPNISYICSRYYRAPELIFGATE-YTTAIDMWSIGCVLAELLLGQPLFPGESG-VDQLVEIIKILGTPTREEIKCMN 368 (468)
Q Consensus 291 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~~DvwSlG~il~ell~G~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~~ 368 (468)
...-......|...|||||.+..... |+.++||||||++|||+.||..||+.-+. .+++.+++. |.|+..
T Consensus 219 v~SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~--gdpp~l------ 290 (361)
T KOG1006|consen 219 VDSIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVI--GDPPIL------ 290 (361)
T ss_pred HHHHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHc--CCCCee------
Confidence 66666667788999999999965544 99999999999999999999999987543 334443332 222110
Q ss_pred CCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCCCCCC
Q 012233 369 PNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNT 431 (468)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~~~~~ 431 (468)
.++. -.-+++..+..||..||.+|-+.||...+++.+||++.-.....
T Consensus 291 ------~~~~---------~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~~fyr~y~~~~~ 338 (361)
T KOG1006|consen 291 ------LFDK---------ECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKFPFYRMYAVEGP 338 (361)
T ss_pred ------cCcc---------cccccCHHHHHHHHHHhhcccccCcchhhhhcCchhhhhhhcCC
Confidence 0000 00237888999999999999999999999999999987544433
No 369
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=7.3e-37 Score=293.65 Aligned_cols=244 Identities=27% Similarity=0.360 Sum_probs=189.8
Q ss_pred cceEEeceecccCceEEEEEEEcCC---CCEEEEEEeeccc-----chHHHHHHHHHHcCCCCcccccceeeecCCCCce
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLET---GDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDEL 208 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~---g~~vaiK~~~~~~-----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 208 (468)
.+|.+.+.||+|+||.||+|.+... ...||||...... ..+.+|+.+++.++||||+++++++. +.
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-----~~- 79 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVIT-----EN- 79 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEc-----CC-
Confidence 3589999999999999999987544 3468999875432 23457999999999999999998773 22
Q ss_pred EEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCcc
Q 012233 209 YLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAK 288 (468)
Q Consensus 209 ~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~ 288 (468)
..++||||+.++.+.... ......+++..+..++.|++.||.|||+ .|++|+||||+|||++.++ .++|+|||++.
T Consensus 80 ~~~lv~e~~~~~~L~~~l--~~~~~~~~~~~~~~~~~~l~~~l~~lH~-~~~~H~dl~p~nili~~~~-~~~l~d~g~~~ 155 (270)
T cd05056 80 PVWIVMELAPLGELRSYL--QVNKYSLDLASLILYSYQLSTALAYLES-KRFVHRDIAARNVLVSSPD-CVKLGDFGLSR 155 (270)
T ss_pred CcEEEEEcCCCCcHHHHH--HhCCCCCCHHHHHHHHHHHHHHHHHHHh-CCeeccccChheEEEecCC-CeEEccCceee
Confidence 357999999865443222 1223458899999999999999999998 8999999999999999887 79999999987
Q ss_pred ccCCCCCC--ccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHh
Q 012233 289 MLVPGEPN--ISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEIK 365 (468)
Q Consensus 289 ~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 365 (468)
........ ....++..|+|||.+... .++.++|||||||++|||++ |..||...+..+....+....
T Consensus 156 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~--------- 225 (270)
T cd05056 156 YLEDESYYKASKGKLPIKWMAPESINFR-RFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGE--------- 225 (270)
T ss_pred ecccccceecCCCCccccccChhhhccC-CCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCC---------
Confidence 65433211 122335679999998654 48999999999999999986 999998877665554433210
Q ss_pred hcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 366 CMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
.. ..+..++..+.++|.+||..+|.+|||+.+++.
T Consensus 226 ---------~~----------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~ 260 (270)
T cd05056 226 ---------RL----------PMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKA 260 (270)
T ss_pred ---------cC----------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 00 023457889999999999999999999999876
No 370
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-38 Score=319.71 Aligned_cols=206 Identities=29% Similarity=0.402 Sum_probs=173.0
Q ss_pred eEEeceecccCceEEEEEEEcCCCCEEEEEEeecc-----cchHHHHHHHHHHcCCCCcccccceeeecC-CCCceEEEE
Q 012233 139 YMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD-----KRYKNRELQIMRLLNHPNVVSLKHCFFSTT-EKDELYLNL 212 (468)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~-----~~~~~~E~~il~~l~hpnIv~l~~~~~~~~-~~~~~~~~l 212 (468)
|...+.||+|+||.||+++++.+|+.||||.+.+. ....-+|+++|++|+|+|||++.++=.... .--...-.+
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vl 94 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVL 94 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceE
Confidence 77788999999999999999999999999988553 233347999999999999999977542211 000122459
Q ss_pred EeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCC--C-CcEEEeeecCccc
Q 012233 213 VLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPH--T-HQLKICDFGSAKM 289 (468)
Q Consensus 213 v~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~--~-~~vkL~DFG~a~~ 289 (468)
|||||.||.+.-.........++++.++..+..+++.||.|||+ +|||||||||+||++-.. + +--||+|||+|+.
T Consensus 95 vmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrE-n~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Are 173 (732)
T KOG4250|consen 95 VMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRE-NGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARE 173 (732)
T ss_pred EEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHH-cCceeccCCCCcEEEeecCCCceEEeeeccccccc
Confidence 99999988777666666777889999999999999999999998 999999999999987432 2 2479999999999
Q ss_pred cCCCCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCc
Q 012233 290 LVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESG 345 (468)
Q Consensus 290 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~ 345 (468)
+.++....+.+||+.|.+||++.....|+..+|.|||||++|++.||..||.....
T Consensus 174 l~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~ 229 (732)
T KOG4250|consen 174 LDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGG 229 (732)
T ss_pred CCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCC
Confidence 99888889999999999999997556799999999999999999999999976443
No 371
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=1.2e-36 Score=290.54 Aligned_cols=244 Identities=23% Similarity=0.360 Sum_probs=190.4
Q ss_pred ccceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc---chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEE
Q 012233 136 TISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK---RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNL 212 (468)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~---~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~l 212 (468)
..+|.+.+.||+|+||.||++.+. .+..+|+|.+.... ....+|+.+++.++|+||+++++++.. ...++
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~------~~~~~ 77 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK------EPIYI 77 (260)
T ss_pred ccceeEEeEecCccceEEEEEEec-CCccEEEEecCCChhHHHHHHHHHHHHHhcCCCCcceEEEEEcC------CCeEE
Confidence 346999999999999999999854 55679999886543 234579999999999999999887732 34789
Q ss_pred Eeecccc-hHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccC
Q 012233 213 VLEYISE-TVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (468)
Q Consensus 213 v~e~~~~-~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~ 291 (468)
+|||+++ .+.+.+... ....+++..+..++.||+.||.|||+ .|++|+||||+||+++.++ .+||+|||.+....
T Consensus 78 v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~aL~~lH~-~~i~H~dl~p~ni~i~~~~-~~~l~d~~~~~~~~ 153 (260)
T cd05073 78 ITEFMAKGSLLDFLKSD--EGSKQPLPKLIDFSAQIAEGMAFIEQ-RNYIHRDLRAANILVSASL-VCKIADFGLARVIE 153 (260)
T ss_pred EEEeCCCCcHHHHHHhC--CccccCHHHHHHHHHHHHHHHHHHHh-CCccccccCcceEEEcCCC-cEEECCCcceeecc
Confidence 9999986 454443321 23457888899999999999999998 8999999999999999887 79999999987654
Q ss_pred CCCC--CccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcC
Q 012233 292 PGEP--NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEIKCMN 368 (468)
Q Consensus 292 ~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 368 (468)
.... .....++..|+|||++.+. .++.++|+|||||++|+|++ |..||.+.+..+....+...
T Consensus 154 ~~~~~~~~~~~~~~~y~~PE~~~~~-~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~------------- 219 (260)
T cd05073 154 DNEYTAREGAKFPIKWTAPEAINFG-SFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERG------------- 219 (260)
T ss_pred CCCcccccCCcccccccCHhHhccC-CcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCC-------------
Confidence 3221 1123446779999998654 48999999999999999998 99999877655544433221
Q ss_pred CCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 369 PNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
+..+ ....++.++.+++.+||+.||.+||++.+++.
T Consensus 220 -----~~~~----------~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05073 220 -----YRMP----------RPENCPEELYNIMMRCWKNRPEERPTFEYIQS 255 (260)
T ss_pred -----CCCC----------CcccCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 0000 12347889999999999999999999998764
No 372
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=7.5e-37 Score=290.09 Aligned_cols=238 Identities=24% Similarity=0.331 Sum_probs=185.1
Q ss_pred ceecccCceEEEEEEEcCCCCEEEEEEeeccc-----chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEEEeecc
Q 012233 143 RVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVLEYI 217 (468)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv~e~~ 217 (468)
+.||.|+||.||+|.+.. ++.||+|.+.... ..+.+|+.+++.++|+||+++++++ .+..+.++||||+
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~~v~e~~ 74 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVC-----VQKQPIYIVMELV 74 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEE-----ecCCCeEEEEEcC
Confidence 469999999999999877 9999999875432 2345799999999999999999988 3444588999999
Q ss_pred cchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCCCCCC-
Q 012233 218 SETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGEPN- 296 (468)
Q Consensus 218 ~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~~~~~- 296 (468)
.++.+.... ......+++..+..++.|++.||.|||+ +|++||||||+|||++.++ .++|+|||.+.........
T Consensus 75 ~~~~l~~~l--~~~~~~~~~~~~~~~~~~~~~~l~~lH~-~~i~h~di~p~nili~~~~-~~~l~d~g~~~~~~~~~~~~ 150 (251)
T cd05041 75 PGGSLLTFL--RKKKNRLTVKKLLQMSLDAAAGMEYLES-KNCIHRDLAARNCLVGENN-VLKISDFGMSREEEGGIYTV 150 (251)
T ss_pred CCCcHHHHH--HhcCCCCCHHHHHHHHHHHHHHHHHHHh-CCEehhhcCcceEEEcCCC-cEEEeeccccccccCCccee
Confidence 866443221 1223457888899999999999999998 8999999999999999887 7999999998755322111
Q ss_pred --ccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCCcc
Q 012233 297 --ISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTE 373 (468)
Q Consensus 297 --~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 373 (468)
....++..|+|||.+.+. .++.++|+|||||++|+|++ |..||...........+...
T Consensus 151 ~~~~~~~~~~y~~PE~~~~~-~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~------------------ 211 (251)
T cd05041 151 SDGLKQIPIKWTAPEALNYG-RYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESG------------------ 211 (251)
T ss_pred ccccCcceeccCChHhhccC-CCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcC------------------
Confidence 112335679999998655 48999999999999999998 89999876654433332210
Q ss_pred CCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 374 FKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
... ..+..++.++.++|.+||..+|.+|||+.++++
T Consensus 212 ~~~----------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~ 247 (251)
T cd05041 212 YRM----------PAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYN 247 (251)
T ss_pred CCC----------CCCccCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 000 022347889999999999999999999999986
No 373
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-37 Score=330.06 Aligned_cols=246 Identities=21% Similarity=0.342 Sum_probs=197.3
Q ss_pred ceEEeceecccCceEEEEEEEcCCCC-----EEEEEEeecc-----cchHHHHHHHHHHcCCCCcccccceeeecCCCCc
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGD-----SVAIKKVLQD-----KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDE 207 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~-----~vaiK~~~~~-----~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 207 (468)
.-.+.+.||+|+||.||.|....... .||+|.+.+. ...+.+|..+|+.++|||||+++++++...
T Consensus 693 ~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~---- 768 (1025)
T KOG1095|consen 693 NVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSG---- 768 (1025)
T ss_pred heEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCC----
Confidence 46788899999999999999865433 3999988654 344567999999999999999999996633
Q ss_pred eEEEEEeecccch-HHHHHhhhhh---cCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEee
Q 012233 208 LYLNLVLEYISET-VYRVSKHYTR---MNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICD 283 (468)
Q Consensus 208 ~~~~lv~e~~~~~-ll~~~~~~~~---~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~D 283 (468)
..+|++|||.+| |+..++.... ....+....+..++.||++|+.||++ +++|||||...|+||+... .|||+|
T Consensus 769 -~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~-~~fvHRDLAaRNCLL~~~r-~VKIaD 845 (1025)
T KOG1095|consen 769 -PPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLES-KHFVHRDLAARNCLLDERR-VVKIAD 845 (1025)
T ss_pred -CcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHh-CCCcCcchhhhheeecccC-cEEEcc
Confidence 367999999865 5554443211 14567889999999999999999998 8999999999999999887 899999
Q ss_pred ecCccccCCCCC-Cccc--cccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCC
Q 012233 284 FGSAKMLVPGEP-NISY--ICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTP 359 (468)
Q Consensus 284 FG~a~~~~~~~~-~~~~--~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~ 359 (468)
||+|+.+..... .... .-...|||||.+... .++.++|||||||+|||+++ |..||.+.++.+.+....+....+
T Consensus 846 FGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~-iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~ggRL~ 924 (1025)
T KOG1095|consen 846 FGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDG-IFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGGRLD 924 (1025)
T ss_pred cchhHhhhhchheeccCccccceecCCHHHHhhc-ccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCCccC
Confidence 999985433221 1111 224689999999764 59999999999999999997 999999999888777665532111
Q ss_pred CHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 360 TREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
.+..+++.+.++|..||+.+|++||++..+++
T Consensus 925 ----------------------------~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~ 956 (1025)
T KOG1095|consen 925 ----------------------------PPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVE 956 (1025)
T ss_pred ----------------------------CCCCCChHHHHHHHHHccCChhhCccHHHHHh
Confidence 23558999999999999999999999998876
No 374
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=9.1e-37 Score=291.41 Aligned_cols=240 Identities=24% Similarity=0.346 Sum_probs=179.3
Q ss_pred ceecccCceEEEEEEEcC---CCCEEEEEEeeccc-----chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEEEe
Q 012233 143 RVVGTGSFGVVFQAKCLE---TGDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVL 214 (468)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~---~g~~vaiK~~~~~~-----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv~ 214 (468)
+.||+|+||.||+|.+.. .+..||||.+.... ....+|+.+++.++||||+++++++... ....++||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~----~~~~~lv~ 76 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPS----EGSPLVVL 76 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecC----CCCcEEEE
Confidence 468999999999998753 34579999874321 2344688999999999999999866432 22467999
Q ss_pred ecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCCCC
Q 012233 215 EYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGE 294 (468)
Q Consensus 215 e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~~~ 294 (468)
||+.++.+..... .......+..+..++.||+.||.|||+ .||+||||||+|||++.++ .+||+|||+++......
T Consensus 77 e~~~~~~L~~~~~--~~~~~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dlk~~nili~~~~-~~kl~dfg~~~~~~~~~ 152 (262)
T cd05058 77 PYMKHGDLRNFIR--SETHNPTVKDLIGFGLQVAKGMEYLAS-KKFVHRDLAARNCMLDESF-TVKVADFGLARDIYDKE 152 (262)
T ss_pred ecCCCCCHHHHHH--hcCCCCCHHHHHHHHHHHHHHHHHHHh-CCccccccCcceEEEcCCC-cEEECCccccccccCCc
Confidence 9998654432221 223345677788899999999999998 8999999999999999887 79999999987553221
Q ss_pred -----CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcC
Q 012233 295 -----PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEIKCMN 368 (468)
Q Consensus 295 -----~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 368 (468)
......++..|+|||.+.+. .++.++|||||||++|||++ |.+||...+..+....+...
T Consensus 153 ~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~------------- 218 (262)
T cd05058 153 YYSVHNHTGAKLPVKWMALESLQTQ-KFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQG------------- 218 (262)
T ss_pred ceeecccccCcCCccccChhHhccC-ccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcC-------------
Confidence 11233456789999998654 48999999999999999999 56777766544433322210
Q ss_pred CCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 369 PNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
.... .+..+++.+.+++.+||..+|++||++.+++.
T Consensus 219 ---~~~~------------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~ 254 (262)
T cd05058 219 ---RRLL------------QPEYCPDPLYEVMLSCWHPKPEMRPTFSELVS 254 (262)
T ss_pred ---CCCC------------CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 0000 12336788999999999999999999999976
No 375
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=5.4e-37 Score=296.95 Aligned_cols=259 Identities=24% Similarity=0.356 Sum_probs=187.7
Q ss_pred ceEEeceecccCceEEEEEEE----cCCCCEEEEEEeeccc-----chHHHHHHHHHHcCCCCcccccceeeecCCCCce
Q 012233 138 SYMAERVVGTGSFGVVFQAKC----LETGDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDEL 208 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~----~~~g~~vaiK~~~~~~-----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 208 (468)
.|++.+.||+|+||.||+|.+ ..++..||+|.+.... ....+|+.+++.++||||+++++++... +..
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---~~~ 81 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTED---GGN 81 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecC---CCC
Confidence 378999999999999999985 4578899999885332 2355799999999999999999877432 234
Q ss_pred EEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCcc
Q 012233 209 YLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAK 288 (468)
Q Consensus 209 ~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~ 288 (468)
..++||||++++.+..... +....+++..+..++.||+.||+|||+ +||+||||||+|||++.++ .++|+|||++.
T Consensus 82 ~~~lv~e~~~g~~L~~~l~--~~~~~~~~~~~~~i~~~i~~aL~~lH~-~gi~H~dlkp~Nil~~~~~-~~~l~dfg~~~ 157 (284)
T cd05079 82 GIKLIMEFLPSGSLKEYLP--RNKNKINLKQQLKYAVQICKGMDYLGS-RQYVHRDLAARNVLVESEH-QVKIGDFGLTK 157 (284)
T ss_pred ceEEEEEccCCCCHHHHHH--hccCCCCHHHHHHHHHHHHHHHHHHHH-CCeeecccchheEEEcCCC-CEEECCCcccc
Confidence 5789999998765543221 223457899999999999999999998 9999999999999999887 79999999997
Q ss_pred ccCCCCC----CccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHh-CCCCHH-
Q 012233 289 MLVPGEP----NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKIL-GTPTRE- 362 (468)
Q Consensus 289 ~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~-~~~~~~- 362 (468)
.+..... .....++..|+|||++.+. .++.++|||||||++|+|+++..|+..... ......... +.....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~y~apE~~~~~-~~~~~~Di~slG~il~ellt~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 234 (284)
T cd05079 158 AIETDKEYYTVKDDLDSPVFWYAPECLIQS-KFYIASDVWSFGVTLYELLTYCDSESSPMT--LFLKMIGPTHGQMTVTR 234 (284)
T ss_pred ccccCccceeecCCCCCCccccCHHHhccC-CCCccccchhhhhhhhhhhcCCCCCccccc--hhhhhcccccccccHHH
Confidence 6643321 1234567789999998655 489999999999999999998876533211 000000000 000000
Q ss_pred HHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 363 EIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
...... .. .....+..++..+.+||.+||+.||.+||++.+++.
T Consensus 235 ~~~~~~---~~----------~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 278 (284)
T cd05079 235 LVRVLE---EG----------KRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIE 278 (284)
T ss_pred HHHHHH---cC----------ccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 000000 00 000123457899999999999999999999999986
No 376
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=8.7e-37 Score=290.41 Aligned_cols=240 Identities=23% Similarity=0.353 Sum_probs=188.7
Q ss_pred cceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc--chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEEEe
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK--RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVL 214 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~--~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv~ 214 (468)
.+|.+.+.||+|+||.||++.. +++.||+|.+.... ....+|+.+++.++||||+++++++.. . ..++||
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~--~~~~~~iK~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-----~-~~~~v~ 77 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY--TGQKVAVKNIKCDVTAQAFLEETAVMTKLHHKNLVRLLGVILH-----N-GLYIVM 77 (254)
T ss_pred HHceeeeeeccCCCCceEeccc--CCCceEEEeecCcchHHHHHHHHHHHHhCCCCCcCeEEEEEcC-----C-CcEEEE
Confidence 4699999999999999999975 78899999885432 244679999999999999999988732 1 257999
Q ss_pred ecccch-HHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCCC
Q 012233 215 EYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPG 293 (468)
Q Consensus 215 e~~~~~-ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~~ 293 (468)
||+.++ +...+... ....+++..+..++.|++.||.|||+ .|++||||||+|||++.++ .+||+|||++......
T Consensus 78 e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~qi~~al~~lH~-~~~~H~dl~p~nili~~~~-~~kl~Dfg~~~~~~~~ 153 (254)
T cd05083 78 ELMSKGNLVNFLRTR--GRALVSVIQLLQFSLDVAEGMEYLES-KKLVHRDLAARNILVSEDG-VAKVSDFGLARVGSMG 153 (254)
T ss_pred ECCCCCCHHHHHHhc--CcCCCCHHHHHHHHHHHHHHHHHHHh-CCeeccccCcceEEEcCCC-cEEECCCccceecccc
Confidence 999864 44443321 23457889999999999999999998 8999999999999999887 7999999998754322
Q ss_pred CCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCCc
Q 012233 294 EPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYT 372 (468)
Q Consensus 294 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 372 (468)
......+..|+|||.+.+. .++.++|+|||||++|+|++ |+.||...+..+....+.+.
T Consensus 154 --~~~~~~~~~y~~pe~~~~~-~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~----------------- 213 (254)
T cd05083 154 --VDNSKLPVKWTAPEALKHK-KFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKG----------------- 213 (254)
T ss_pred --CCCCCCCceecCHHHhccC-CcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCC-----------------
Confidence 1223446789999998654 48999999999999999997 99999877654433332210
Q ss_pred cCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 373 EFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
+.. .....+++.+.+||.+||+.+|..||++.+++.
T Consensus 214 -~~~----------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 249 (254)
T cd05083 214 -YRM----------EPPEGCPADVYVLMTSCWETEPKKRPSFHKLRE 249 (254)
T ss_pred -CCC----------CCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 000 012347889999999999999999999999875
No 377
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=8.7e-37 Score=298.46 Aligned_cols=243 Identities=23% Similarity=0.333 Sum_probs=187.6
Q ss_pred cceEEeceecccCceEEEEEEEcCCCC----EEEEEEeecccc-----hHHHHHHHHHHcCCCCcccccceeeecCCCCc
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLETGD----SVAIKKVLQDKR-----YKNRELQIMRLLNHPNVVSLKHCFFSTTEKDE 207 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~----~vaiK~~~~~~~-----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 207 (468)
.+|+..+.||+|+||.||+|.+..+|. .||+|.+..... ...+|+.+++.++||||+++++++...
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~----- 81 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP----- 81 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-----
Confidence 358899999999999999999887776 468887754322 345789999999999999999987421
Q ss_pred eEEEEEeecccch-HHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecC
Q 012233 208 LYLNLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGS 286 (468)
Q Consensus 208 ~~~~lv~e~~~~~-ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~ 286 (468)
..++++||++++ +.+.+. .....+++..+..++.|++.||.|||+ +||+|+||||+|||++.++ .+||+|||+
T Consensus 82 -~~~~v~e~~~~g~l~~~~~---~~~~~~~~~~~~~~~~qi~~~L~~LH~-~~ivH~dikp~Nill~~~~-~~kL~Dfg~ 155 (303)
T cd05110 82 -TIQLVTQLMPHGCLLDYVH---EHKDNIGSQLLLNWCVQIAKGMMYLEE-RRLVHRDLAARNVLVKSPN-HVKITDFGL 155 (303)
T ss_pred -CceeeehhcCCCCHHHHHH---hcccCCCHHHHHHHHHHHHHHHHHHhh-cCeeccccccceeeecCCC-ceEEccccc
Confidence 246899999865 444322 223457888999999999999999998 8999999999999999877 799999999
Q ss_pred ccccCCCCCC---ccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHH
Q 012233 287 AKMLVPGEPN---ISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTRE 362 (468)
Q Consensus 287 a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~ 362 (468)
++........ ....++..|+|||.+.+.. ++.++|||||||++|||++ |..||.+....+ +..++.....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~-~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~-~~~~~~~~~~---- 229 (303)
T cd05110 156 ARLLEGDEKEYNADGGKMPIKWMALECIHYRK-FTHQSDVWSYGVTIWELMTFGGKPYDGIPTRE-IPDLLEKGER---- 229 (303)
T ss_pred cccccCcccccccCCCccccccCCHHHhccCC-CChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH-HHHHHHCCCC----
Confidence 9866433221 2234567899999986544 8999999999999999997 999997765333 3333221100
Q ss_pred HHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 363 EIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
++ .+...+..+.+++.+||..||.+||++.+++.
T Consensus 230 -------------~~----------~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~ 263 (303)
T cd05110 230 -------------LP----------QPPICTIDVYMVMVKCWMIDADSRPKFKELAA 263 (303)
T ss_pred -------------CC----------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 00 12336778999999999999999999999877
No 378
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=8.9e-37 Score=292.64 Aligned_cols=242 Identities=22% Similarity=0.322 Sum_probs=184.8
Q ss_pred ceecccCceEEEEEEEcCCC------CEEEEEEeecc-----cchHHHHHHHHHHcCCCCcccccceeeecCCCCceEEE
Q 012233 143 RVVGTGSFGVVFQAKCLETG------DSVAIKKVLQD-----KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (468)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~~g------~~vaiK~~~~~-----~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~ 211 (468)
+.||+|+||.||+|.+.... ..+|+|.+... .....+|+.+++.++||||+++++++. +....+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 75 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCL-----LNEPQY 75 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeec-----CCCCeE
Confidence 36999999999999986543 67999987543 223457999999999999999999883 344588
Q ss_pred EEeecccchH-HHHHhhhhh---cCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCC----CcEEEee
Q 012233 212 LVLEYISETV-YRVSKHYTR---MNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHT----HQLKICD 283 (468)
Q Consensus 212 lv~e~~~~~l-l~~~~~~~~---~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~----~~vkL~D 283 (468)
+||||++++. ...+..... ....+++..+..++.||+.||.|||+ .+++|+||||+|||++.++ ..++|+|
T Consensus 76 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~-~~i~H~dl~p~nil~~~~~~~~~~~~~l~d 154 (269)
T cd05044 76 IIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQ-MHFIHRDLAARNCLVSEKGYDADRVVKIGD 154 (269)
T ss_pred EEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHh-CCcccCCCChheEEEecCCCCCCcceEECC
Confidence 9999998654 443332211 22447888899999999999999998 8999999999999998754 2599999
Q ss_pred ecCccccCCCCC---CccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCC
Q 012233 284 FGSAKMLVPGEP---NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTP 359 (468)
Q Consensus 284 FG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~ 359 (468)
||++........ .....++..|+|||.+.+.. ++.++|||||||++|+|++ |..||...+..+....+... .
T Consensus 155 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~-~-- 230 (269)
T cd05044 155 FGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGK-FTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTAG-G-- 230 (269)
T ss_pred cccccccccccccccCcccCCCccccCHHHHccCC-cccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhcC-C--
Confidence 999876533221 12234568899999996554 8999999999999999998 99999877655544333210 0
Q ss_pred CHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 360 TREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
.. ..+..++..+.+||.+||..+|.+||++.++++
T Consensus 231 -------------~~------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 265 (269)
T cd05044 231 -------------RL------------QKPENCPDKIYQLMTNCWAQDPSERPTFDRIQE 265 (269)
T ss_pred -------------cc------------CCcccchHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 00 022347889999999999999999999999864
No 379
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=1.5e-36 Score=291.76 Aligned_cols=250 Identities=21% Similarity=0.318 Sum_probs=189.2
Q ss_pred eEEeceecccCceEEEEEEEcC---CCCEEEEEEeeccc------chHHHHHHHHHHcCCCCcccccceeeecCCCCc-e
Q 012233 139 YMAERVVGTGSFGVVFQAKCLE---TGDSVAIKKVLQDK------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDE-L 208 (468)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~~~~---~g~~vaiK~~~~~~------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~-~ 208 (468)
|.+.+.||+|+||.||+|.+.. ++..||||++.... ....+|+.+++.++||||+++++++......+. .
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 5678899999999999998643 57889999885432 124578999999999999999998755433222 2
Q ss_pred EEEEEeecccchHHHHHhhhh---hcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeec
Q 012233 209 YLNLVLEYISETVYRVSKHYT---RMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFG 285 (468)
Q Consensus 209 ~~~lv~e~~~~~ll~~~~~~~---~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG 285 (468)
..+++++|+.++.+....... .....+++..++.++.||+.||+|||+ .||+||||||+|||++.++ .+||+|||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~-~~i~H~dikp~nili~~~~-~~kl~dfg 158 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSS-KNFIHRDLAARNCMLNENM-TVCVADFG 158 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCEeecccchhhEEEcCCC-CEEECccc
Confidence 356889999866543222111 112347888899999999999999998 8999999999999999887 79999999
Q ss_pred CccccCCCC---CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCH
Q 012233 286 SAKMLVPGE---PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTR 361 (468)
Q Consensus 286 ~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~ 361 (468)
+++...... ......+++.|++||.+.+.. ++.++|||||||++|+|++ |++||.+.+..+....+...
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~-~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~------ 231 (273)
T cd05074 159 LSKKIYSGDYYRQGCASKLPVKWLALESLADNV-YTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKG------ 231 (273)
T ss_pred ccccccCCcceecCCCccCchhhcCHhHHhcCc-cchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcC------
Confidence 987653322 112334567899999986544 8899999999999999998 89999876654443333221
Q ss_pred HHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 362 EEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
.... .....+..+.+++.+||+.+|.+||++.+++.
T Consensus 232 ----------~~~~------------~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~ 267 (273)
T cd05074 232 ----------NRLK------------QPPDCLEDVYELMCQCWSPEPKCRPSFQHLRD 267 (273)
T ss_pred ----------CcCC------------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 0000 11346789999999999999999999999875
No 380
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=4.7e-36 Score=287.98 Aligned_cols=245 Identities=19% Similarity=0.243 Sum_probs=180.1
Q ss_pred eecccCceEEEEEEEcCC--CCEEEEEEeeccc-----chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEEEeec
Q 012233 144 VVGTGSFGVVFQAKCLET--GDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVLEY 216 (468)
Q Consensus 144 ~lG~G~fg~Vy~~~~~~~--g~~vaiK~~~~~~-----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv~e~ 216 (468)
.||+|+||.||+|..... ...+++|.+.... ....+|+.+++.++||||+++++.+ .+....|+||||
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~-----~~~~~~~lv~e~ 76 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQC-----VEAIPYLLVFEY 76 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEe-----cCCCccEEEEec
Confidence 599999999999975433 2346677654332 2445788899999999999999988 444568999999
Q ss_pred ccchHH-HHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCCCC-
Q 012233 217 ISETVY-RVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGE- 294 (468)
Q Consensus 217 ~~~~ll-~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~~~- 294 (468)
+.++.+ ..+..........++..++.++.||+.||.|||+ .+|+||||||+|||++.++ .++|+|||++.......
T Consensus 77 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~-~~i~H~dikp~nil~~~~~-~~~l~Dfg~~~~~~~~~~ 154 (268)
T cd05086 77 CELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHK-HNFLHSDLALRNCFLTSDL-TVKVGDYGIGPSRYKEDY 154 (268)
T ss_pred CCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHH-CCeeccCCccceEEEcCCc-cEEecccccccccCcchh
Confidence 996544 3333222223456777788999999999999998 8999999999999999888 79999999985432111
Q ss_pred --CCccccccCCccccccccCC------CCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHh
Q 012233 295 --PNISYICSRYYRAPELIFGA------TEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEIK 365 (468)
Q Consensus 295 --~~~~~~gt~~y~aPE~~~~~------~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 365 (468)
......++..|+|||++... ..++.++|||||||++|||++ |..||...+..+.+..+.......
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~------ 228 (268)
T cd05086 155 IETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVK------ 228 (268)
T ss_pred hhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccc------
Confidence 12345678899999987421 235789999999999999996 678898776666555544321100
Q ss_pred hcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 366 CMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
.+...+...+++.+.+++..|| .+|.+||++.+++.
T Consensus 229 -----------------~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~ 264 (268)
T cd05086 229 -----------------LFKPQLELPYSERWYEVLQFCW-LSPEKRATAEEVHR 264 (268)
T ss_pred -----------------cCCCccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHH
Confidence 0011122346788999999999 68999999999864
No 381
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=2.6e-36 Score=287.51 Aligned_cols=235 Identities=21% Similarity=0.218 Sum_probs=180.2
Q ss_pred ceecccCceEEEEEEEcCCC----------CEEEEEEeeccc---chHHHHHHHHHHcCCCCcccccceeeecCCCCceE
Q 012233 143 RVVGTGSFGVVFQAKCLETG----------DSVAIKKVLQDK---RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELY 209 (468)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~~g----------~~vaiK~~~~~~---~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~ 209 (468)
+.||+|+||.||+|.+..++ ..+++|.+.... ..+.+|+.+++.++||||+++++++.. ..
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------~~ 74 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKHLVKLYGVCVR------DE 74 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcCCCcchhheeeEEec------CC
Confidence 46899999999999997766 357888765433 345678999999999999999998744 23
Q ss_pred EEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCC------cEEEee
Q 012233 210 LNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTH------QLKICD 283 (468)
Q Consensus 210 ~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~------~vkL~D 283 (468)
.++||||+.++.+...... ....+++..+..++.||+.||.|||+ +||+||||||+|||++.++. .+||+|
T Consensus 75 ~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~~i~~~l~~LH~-~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~D 151 (259)
T cd05037 75 NIMVEEYVKFGPLDVFLHR--EKNNVSLHWKLDVAKQLASALHYLED-KKLVHGNVCGKNILVARYGLNEGYVPFIKLSD 151 (259)
T ss_pred cEEEEEcCCCCcHHHHHHh--hccCCCHHHHHHHHHHHHHHHHHHhh-CCeecccCccceEEEecCccccCCceeEEeCC
Confidence 6799999998766533221 12368889999999999999999998 89999999999999987652 499999
Q ss_pred ecCccccCCCCCCccccccCCccccccccCC-CCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCH
Q 012233 284 FGSAKMLVPGEPNISYICSRYYRAPELIFGA-TEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTR 361 (468)
Q Consensus 284 FG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~ 361 (468)
||++..... .....++..|+|||++.+. ..++.++|||||||++|+|++ |..||...+..+....... .
T Consensus 152 fg~a~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~~----~-- 222 (259)
T cd05037 152 PGIPITVLS---REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQD----Q-- 222 (259)
T ss_pred CCccccccc---ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHhc----C--
Confidence 999976543 2234567789999998765 358999999999999999999 5888866543222111110 0
Q ss_pred HHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 362 EEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
.. .+......+.++|.+||..+|.+|||+.+++.
T Consensus 223 ----------~~--------------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 256 (259)
T cd05037 223 ----------HR--------------LPMPDCAELANLINQCWTYDPTKRPSFRAILR 256 (259)
T ss_pred ----------CC--------------CCCCCchHHHHHHHHHhccChhhCCCHHHHHH
Confidence 00 00112378999999999999999999999875
No 382
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=6.7e-37 Score=302.36 Aligned_cols=241 Identities=29% Similarity=0.441 Sum_probs=193.5
Q ss_pred eEEeceecccCceEEEEEEEcCC--CC--EEEEEEeecc-----cchHHHHHHHHHHcCCCCcccccceeeecCCCCceE
Q 012233 139 YMAERVVGTGSFGVVFQAKCLET--GD--SVAIKKVLQD-----KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELY 209 (468)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~~~~~--g~--~vaiK~~~~~-----~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~ 209 (468)
..+.++||.|.||.||.|..... |+ -||||..+.+ ...+..|..+|+.++||||++|+|++.. . -
T Consensus 391 Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e-----~-P 464 (974)
T KOG4257|consen 391 ITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-----Q-P 464 (974)
T ss_pred ccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec-----c-c
Confidence 44567899999999999987432 33 4889988654 2334569999999999999999999832 2 2
Q ss_pred EEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccc
Q 012233 210 LNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (468)
Q Consensus 210 ~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~ 289 (468)
.+||||.++-|-+.... ......++...+..|++||+.||.|||+ ..+|||||-..||||.+.. .|||+|||+++.
T Consensus 465 ~WivmEL~~~GELr~yL--q~nk~sL~l~tL~ly~~Qi~talaYLeS-krfVHRDIAaRNiLVsSp~-CVKLaDFGLSR~ 540 (974)
T KOG4257|consen 465 MWIVMELAPLGELREYL--QQNKDSLPLRTLTLYCYQICTALAYLES-KRFVHRDIAARNILVSSPQ-CVKLADFGLSRY 540 (974)
T ss_pred eeEEEecccchhHHHHH--HhccccchHHHHHHHHHHHHHHHHHHHh-hchhhhhhhhhheeecCcc-eeeecccchhhh
Confidence 78999999966554322 2335668889999999999999999998 8999999999999999887 799999999998
Q ss_pred cCCCCCCccccc--cCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHhh
Q 012233 290 LVPGEPNISYIC--SRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEIKC 366 (468)
Q Consensus 290 ~~~~~~~~~~~g--t~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 366 (468)
+..........| ..-|||||.+. -..++.++|||-|||.+||++. |..||.+-.+.+.+..|.+..+.|
T Consensus 541 ~ed~~yYkaS~~kLPIKWmaPESIN-fRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnGeRlP------- 612 (974)
T KOG4257|consen 541 LEDDAYYKASRGKLPIKWMAPESIN-FRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIENGERLP------- 612 (974)
T ss_pred ccccchhhccccccceeecCccccc-hhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEecCCCCCC-------
Confidence 866554333333 56799999984 4459999999999999999985 999999988877766655432222
Q ss_pred cCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHh
Q 012233 367 MNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEAC 418 (468)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell 418 (468)
.++.+|+.+..|+.+||.+||.+||++.++.
T Consensus 613 ---------------------~P~nCPp~LYslmskcWayeP~kRPrftei~ 643 (974)
T KOG4257|consen 613 ---------------------CPPNCPPALYSLMSKCWAYEPSKRPRFTEIK 643 (974)
T ss_pred ---------------------CCCCCChHHHHHHHHHhccCcccCCcHHHHH
Confidence 4567999999999999999999999877643
No 383
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=1.1e-35 Score=287.23 Aligned_cols=260 Identities=25% Similarity=0.354 Sum_probs=188.3
Q ss_pred ceEEeceecccCceEEEEEEEcC----CCCEEEEEEeecccc-----hHHHHHHHHHHcCCCCcccccceeeecCCCCce
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLE----TGDSVAIKKVLQDKR-----YKNRELQIMRLLNHPNVVSLKHCFFSTTEKDEL 208 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~----~g~~vaiK~~~~~~~-----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 208 (468)
.|.+.+.||+|+||.||+|.... ++..||+|.+..... .+.+|+.+++.+.|+||+++++++.. .+..
T Consensus 5 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~---~~~~ 81 (284)
T cd05038 5 HLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEK---PGGR 81 (284)
T ss_pred hchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeec---CCCC
Confidence 47888999999999999998643 478999998865433 45679999999999999999987733 2244
Q ss_pred EEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCcc
Q 012233 209 YLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAK 288 (468)
Q Consensus 209 ~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~ 288 (468)
+.++||||+.++.+..... .....+++..+..++.||+.||+|||+ .||+|+||||+|||++.++ .++|+|||.+.
T Consensus 82 ~~~lv~e~~~~~~l~~~l~--~~~~~~~~~~~~~~~~~l~~aL~~lH~-~~i~H~dl~p~nil~~~~~-~~~l~dfg~~~ 157 (284)
T cd05038 82 SLRLIMEYLPSGSLRDYLQ--RHRDQINLKRLLLFSSQICKGMDYLGS-QRYIHRDLAARNILVESED-LVKISDFGLAK 157 (284)
T ss_pred ceEEEEecCCCCCHHHHHH--hCccccCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHhEEEcCCC-CEEEccccccc
Confidence 6889999998654432222 223358889999999999999999998 8999999999999999887 79999999998
Q ss_pred ccCCCCCC----ccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHH-HhCCCCHHH
Q 012233 289 MLVPGEPN----ISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIK-ILGTPTREE 363 (468)
Q Consensus 289 ~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~-~~~~~~~~~ 363 (468)
........ ....++..|+|||.+.+. .++.++|+|||||++|||++|..||......... +.. ..+......
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~-~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~--~~~~~~~~~~~~~ 234 (284)
T cd05038 158 VLPEDKDYYYVKEPGESPIFWYAPECLRTS-KFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLR--MIGIAQGQMIVTR 234 (284)
T ss_pred ccccCCcceeccCCCCCcccccCcHHHccC-CCCcccchHHHhhhhheeeccCCCcccccchhcc--ccccccccccHHH
Confidence 76532221 122345679999998655 4899999999999999999999998654321100 000 000000000
Q ss_pred HhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 364 IKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
+...... ...++ .+..++.++.+|+.+||+.+|.+|||+.+++.
T Consensus 235 ~~~~~~~--~~~~~----------~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05038 235 LLELLKE--GERLP----------RPPSCPDEVYDLMKLCWEAEPQDRPSFADLIL 278 (284)
T ss_pred HHHHHHc--CCcCC----------CCccCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 0000000 00000 12346788999999999999999999999986
No 384
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=100.00 E-value=2.3e-35 Score=302.27 Aligned_cols=274 Identities=21% Similarity=0.276 Sum_probs=182.9
Q ss_pred CcccceEEeceecccCceEEEEEEEc----------------CCCCEEEEEEeecccc------------------hHHH
Q 012233 134 KQTISYMAERVVGTGSFGVVFQAKCL----------------ETGDSVAIKKVLQDKR------------------YKNR 179 (468)
Q Consensus 134 ~~~~~y~~~~~lG~G~fg~Vy~~~~~----------------~~g~~vaiK~~~~~~~------------------~~~~ 179 (468)
...++|.+.++||+|+||.||+|.+. ..+..||||.+..... ....
T Consensus 142 ~~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~v 221 (507)
T PLN03224 142 WSSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMV 221 (507)
T ss_pred ccccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHH
Confidence 34668999999999999999999752 2456799998753321 1123
Q ss_pred HHHHHHHcCCCCc-----ccccceeeecCC---CCceEEEEEeecccchHHHHHhhhhh---------------------
Q 012233 180 ELQIMRLLNHPNV-----VSLKHCFFSTTE---KDELYLNLVLEYISETVYRVSKHYTR--------------------- 230 (468)
Q Consensus 180 E~~il~~l~hpnI-----v~l~~~~~~~~~---~~~~~~~lv~e~~~~~ll~~~~~~~~--------------------- 230 (468)
|+.++.+++|.++ ++++++|..... ......+|||||++++.+....+...
T Consensus 222 E~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~ 301 (507)
T PLN03224 222 EAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNM 301 (507)
T ss_pred HHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhc
Confidence 6667777776654 667776643211 11234789999999765543322110
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCCCCCCcc--ccccCCcccc
Q 012233 231 MNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGEPNIS--YICSRYYRAP 308 (468)
Q Consensus 231 ~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~~~~~~~--~~gt~~y~aP 308 (468)
....+++..++.++.|++.+|.|||+ .+|+||||||+|||++.++ .+||+|||++........... ..+++.|+||
T Consensus 302 ~~~~~~~~~~~~i~~ql~~aL~~lH~-~~ivHrDLKp~NILl~~~~-~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aP 379 (507)
T PLN03224 302 PQDKRDINVIKGVMRQVLTGLRKLHR-IGIVHRDIKPENLLVTVDG-QVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPP 379 (507)
T ss_pred ccccCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCchHhEEECCCC-cEEEEeCcCccccccCCccCccccCCCcceeCh
Confidence 11234567788999999999999998 8999999999999999887 799999999976543322222 2347899999
Q ss_pred ccccCCCC-------------------C--CcchhHHHHHHHHHHHHhCCC-CCCCCCcHHHHHHHHHHhCCCCHHHHhh
Q 012233 309 ELIFGATE-------------------Y--TTAIDMWSIGCVLAELLLGQP-LFPGESGVDQLVEIIKILGTPTREEIKC 366 (468)
Q Consensus 309 E~~~~~~~-------------------~--~~~~DvwSlG~il~ell~G~~-pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 366 (468)
|++..... | ..+.||||+||++|+|++|.. ||.+........+. .... ...|+.
T Consensus 380 E~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~---~~~~-~~~~r~ 455 (507)
T PLN03224 380 EELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQ---YDND-LNRWRM 455 (507)
T ss_pred hhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhh---ccch-HHHHHh
Confidence 99853210 1 234799999999999999875 77543221111100 0000 000110
Q ss_pred cCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCC---CCCCCHHHHhCCCCCCC
Q 012233 367 MNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSP---SLRCTALEACAHPFFDD 425 (468)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP---~~R~s~~ell~hp~f~~ 425 (468)
... ..+.|+ .....++.++|||.+||..+| .+|+|+.|+|+||||..
T Consensus 456 ~~~--~~~~~~----------~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~~ 505 (507)
T PLN03224 456 YKG--QKYDFS----------LLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFLP 505 (507)
T ss_pred hcc--cCCCcc----------cccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcCC
Confidence 000 011111 234578999999999999866 68999999999999953
No 385
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-36 Score=300.45 Aligned_cols=250 Identities=23% Similarity=0.315 Sum_probs=202.9
Q ss_pred ceEEeceecccCceEEEEEEEcCCCC---EEEEEEeeccc-----chHHHHHHHHHHcCCCCcccccceeeecCCCCceE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGD---SVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELY 209 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~---~vaiK~~~~~~-----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~ 209 (468)
+..+.++||+|.||.|++|.|...+. .||||++..+. ..+.+|+.+|.+|+|||+++||++.... -
T Consensus 111 ~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~q------p 184 (1039)
T KOG0199|consen 111 QIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLDQ------P 184 (1039)
T ss_pred HHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeeccc------h
Confidence 35677899999999999999975432 48999986553 3466899999999999999999988431 2
Q ss_pred EEEEeecccc-hHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCcc
Q 012233 210 LNLVLEYISE-TVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAK 288 (468)
Q Consensus 210 ~~lv~e~~~~-~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~ 288 (468)
+.||||++.+ +|++.+.. .....|....+..|+.||+.||.||.. +++|||||-..|+||-... .|||+|||+.+
T Consensus 185 ~mMV~ELaplGSLldrLrk--a~~~~llv~~Lcdya~QiA~aM~YLes-krlvHRDLAARNlllaspr-tVKI~DFGLmR 260 (1039)
T KOG0199|consen 185 AMMVFELAPLGSLLDRLRK--AKKAILLVSRLCDYAMQIAKAMQYLES-KRLVHRDLAARNLLLASPR-TVKICDFGLMR 260 (1039)
T ss_pred hhHHhhhcccchHHHHHhh--ccccceeHHHHHHHHHHHHHHHHHHhh-hhhhhhhhhhhhheecccc-eeeeeccccee
Confidence 5699999995 56665544 345678888899999999999999997 9999999999999998765 89999999999
Q ss_pred ccCCCCCCccccc----cCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHH
Q 012233 289 MLVPGEPNISYIC----SRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREE 363 (468)
Q Consensus 289 ~~~~~~~~~~~~g----t~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~ 363 (468)
.+..++..+...+ ...|+|||.+... .++.++|||+|||+||||++ |.-||.+....+.+.+|-+....+
T Consensus 261 aLg~ned~Yvm~p~rkvPfAWCaPEsLrh~-kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD~~erLp---- 335 (1039)
T KOG0199|consen 261 ALGENEDMYVMAPQRKVPFAWCAPESLRHR-KFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNIDAGERLP---- 335 (1039)
T ss_pred ccCCCCcceEecCCCcCcccccCHhHhccc-cccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhccccccCC----
Confidence 8877766554333 4679999999654 59999999999999999997 899999999888777765321111
Q ss_pred HhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCC
Q 012233 364 IKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDL 426 (468)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~ 426 (468)
-++.+++++.++++.||..+|.+|||+..|...-++...
T Consensus 336 ------------------------RPk~csedIY~imk~cWah~paDRptFsair~~~~l~ea 374 (1039)
T KOG0199|consen 336 ------------------------RPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDLVLAEA 374 (1039)
T ss_pred ------------------------CCCCChHHHHHHHHHhccCCccccccHHHHHHhHHHHhc
Confidence 235689999999999999999999999988655444443
No 386
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-35 Score=293.50 Aligned_cols=242 Identities=23% Similarity=0.353 Sum_probs=197.5
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeecccch---HHHHHHHHHHcCCCCcccccceeeecCCCCceEEEEEe
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRY---KNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVL 214 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~~~---~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv~ 214 (468)
+....+.||-|.||.||.|.|+.-.-.||||.++.+... +..|..+|+.+.|||+|+|+++| ..+.-+|||+
T Consensus 268 dItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeikHpNLVqLLGVC-----T~EpPFYIiT 342 (1157)
T KOG4278|consen 268 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC-----THEPPFYIIT 342 (1157)
T ss_pred heeeeeccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhcCccHHHHhhhh-----ccCCCeEEEE
Confidence 345667899999999999999999999999999877544 45799999999999999999999 5555689999
Q ss_pred eccc-chHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCCC
Q 012233 215 EYIS-ETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPG 293 (468)
Q Consensus 215 e~~~-~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~~ 293 (468)
|||. |.||+.++... ...++...+..++.||..|+.||.. +++|||||-..|+||..+. .||++|||+++.+..+
T Consensus 343 EfM~yGNLLdYLRecn--r~ev~avvLlyMAtQIsSaMeYLEk-knFIHRDLAARNCLVgEnh-iVKvADFGLsRlMtgD 418 (1157)
T KOG4278|consen 343 EFMCYGNLLDYLRECN--RSEVPAVVLLYMATQISSAMEYLEK-KNFIHRDLAARNCLVGENH-IVKVADFGLSRLMTGD 418 (1157)
T ss_pred ecccCccHHHHHHHhc--hhhcchhHHHHHHHHHHHHHHHHHH-hhhhhhhhhhhhccccccc-eEEeeccchhhhhcCC
Confidence 9998 66777665433 2446777788899999999999997 9999999999999999886 8999999999987544
Q ss_pred CCC--ccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCC
Q 012233 294 EPN--ISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPN 370 (468)
Q Consensus 294 ~~~--~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 370 (468)
... .......-|.|||.+.-.. ++.++|||+|||+|||+.| |-.||++.+..+.+..+.+.+..
T Consensus 419 TYTAHAGAKFPIKWTAPEsLAyNt-FSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkgyRM------------ 485 (1157)
T KOG4278|consen 419 TYTAHAGAKFPIKWTAPESLAYNT-FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKGYRM------------ 485 (1157)
T ss_pred ceecccCccCcccccCcccccccc-cccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhccccc------------
Confidence 322 2223367799999986444 8999999999999999986 99999998766655544332111
Q ss_pred CccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHH
Q 012233 371 YTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEA 417 (468)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~el 417 (468)
.-++.+++.+.+|++.||+++|..||++.|+
T Consensus 486 ----------------~~PeGCPpkVYeLMraCW~WsPsDRPsFaei 516 (1157)
T KOG4278|consen 486 ----------------DGPEGCPPKVYELMRACWNWSPSDRPSFAEI 516 (1157)
T ss_pred ----------------cCCCCCCHHHHHHHHHHhcCCcccCccHHHH
Confidence 1235689999999999999999999998876
No 387
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-35 Score=288.76 Aligned_cols=251 Identities=22% Similarity=0.264 Sum_probs=195.2
Q ss_pred cceEEeceecccCceEEEEEEEcCCCCEEEEEEeecc-----cchHHHHHHHHHHcCCCCcccccceeeecCCCCceEEE
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD-----KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~-----~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~ 211 (468)
....+++.||+|-||.|.+|.- ..+..||+|.++.+ ...+.+|+++|.+|+|||||+|+++|.... -+|
T Consensus 538 s~L~~~ekiGeGqFGEVhLCev-eg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~De-----Pic 611 (807)
T KOG1094|consen 538 SRLRFKEKIGEGQFGEVHLCEV-EGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDD-----PLC 611 (807)
T ss_pred hheehhhhhcCcccceeEEEEe-cCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCC-----chH
Confidence 3578889999999999999985 34699999998543 355678999999999999999999985433 388
Q ss_pred EEeecccchHHH-HHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCcccc
Q 012233 212 LVLEYISETVYR-VSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (468)
Q Consensus 212 lv~e~~~~~ll~-~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~ 290 (468)
+|+||+..|.+. .+....... ........++.||+.|++||.+ .++|||||.+.|||++.+. ++||+|||+++.+
T Consensus 612 mI~EYmEnGDLnqFl~aheapt--~~t~~~vsi~tqiasgmaYLes-~nfVHrd~a~rNcLv~~e~-~iKiadfgmsR~l 687 (807)
T KOG1094|consen 612 MITEYMENGDLNQFLSAHELPT--AETAPGVSICTQIASGMAYLES-LNFVHRDLATRNCLVDGEF-TIKIADFGMSRNL 687 (807)
T ss_pred HHHHHHhcCcHHHHHHhccCcc--cccchhHHHHHHHHHHHHHHHh-hchhhccccccceeecCcc-cEEecCccccccc
Confidence 999999965443 322221111 2334456699999999999998 8999999999999999998 7999999999876
Q ss_pred CCCCCC---ccccccCCccccccccCCCCCCcchhHHHHHHHHHHHH--hCCCCCCCCCcHHHHHHHHHHhCCCCHHHHh
Q 012233 291 VPGEPN---ISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELL--LGQPLFPGESGVDQLVEIIKILGTPTREEIK 365 (468)
Q Consensus 291 ~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell--~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 365 (468)
..+... ...+-..+|||+|.+.-.+ ++.++|+|+||+++||++ +...||...++++.+.+....+..+.....
T Consensus 688 ysg~yy~vqgr~vlpiRwmawEsillgk-FttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~- 765 (807)
T KOG1094|consen 688 YSGDYYRVQGRAVLPIRWMAWESILLGK-FTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVV- 765 (807)
T ss_pred ccCCceeeecceeeeeeehhHHHHHhcc-ccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCccee-
Confidence 544322 2344578999999997554 999999999999999986 478999888877777666554433322111
Q ss_pred hcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 366 CMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
...+.-++..+.+||.+||..|-.+||+.+++-.
T Consensus 766 --------------------l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~ 799 (807)
T KOG1094|consen 766 --------------------LSRPPACPQGLYELMLRCWRRESEQRPSFEQLHL 799 (807)
T ss_pred --------------------ccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHH
Confidence 1133457889999999999999999999999843
No 388
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-36 Score=306.91 Aligned_cols=251 Identities=30% Similarity=0.445 Sum_probs=192.7
Q ss_pred ceEEeceecccCceE-EEEEEEcCCCCEEEEEEeecccc-hHHHHHHHHHHcC-CCCcccccceeeecCCCCceEEEEEe
Q 012233 138 SYMAERVVGTGSFGV-VFQAKCLETGDSVAIKKVLQDKR-YKNRELQIMRLLN-HPNVVSLKHCFFSTTEKDELYLNLVL 214 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~-Vy~~~~~~~g~~vaiK~~~~~~~-~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~~~~~~lv~ 214 (468)
-|.-.+++|.|+-|+ ||+|.. .|+.||||.+..... ...+|+..|+.-+ |||||++++.- .+..++||..
T Consensus 510 ~~~~~eilG~Gs~Gt~Vf~G~y--e~R~VAVKrll~e~~~~A~rEi~lL~eSD~H~NviRyyc~E-----~d~qF~YIal 582 (903)
T KOG1027|consen 510 FFSPKEILGYGSNGTVVFRGVY--EGREVAVKRLLEEFFDFAQREIQLLQESDEHPNVIRYYCSE-----QDRQFLYIAL 582 (903)
T ss_pred eeccHHHcccCCCCcEEEEEee--CCceehHHHHhhHhHHHHHHHHHHHHhccCCCceEEEEeec-----cCCceEEEEe
Confidence 366678899999886 799998 789999998866544 6678999999885 99999975543 7788999999
Q ss_pred ecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecC---CC-CcEEEeeecCcccc
Q 012233 215 EYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNP---HT-HQLKICDFGSAKML 290 (468)
Q Consensus 215 e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~---~~-~~vkL~DFG~a~~~ 290 (468)
|.|..+|-+++...........-...+.+..|++.||++||+ .+||||||||.||||+. ++ ..++|+|||+++++
T Consensus 583 ELC~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHs-l~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl 661 (903)
T KOG1027|consen 583 ELCACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHS-LKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKL 661 (903)
T ss_pred hHhhhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHh-cccccccCCCceEEEEccCCCcceeEEeccccccccc
Confidence 999999888776521111111114456788899999999998 89999999999999976 23 36899999999998
Q ss_pred CCCCC----CccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhC-CCCCCCCCcHHHHHHHHHHhCCCCHHHHh
Q 012233 291 VPGEP----NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLG-QPLFPGESGVDQLVEIIKILGTPTREEIK 365 (468)
Q Consensus 291 ~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 365 (468)
..+.. ..+..||-.|+|||++.... -+.++|||||||++|..++| .+||... .+.-.+|+..
T Consensus 662 ~~~~sS~~r~s~~sGt~GW~APE~L~~~~-~~~avDiFslGCvfyYvltgG~HpFGd~--~~R~~NIl~~---------- 728 (903)
T KOG1027|consen 662 AGGKSSFSRLSGGSGTSGWQAPEQLREDR-KTQAVDIFSLGCVFYYVLTGGSHPFGDS--LERQANILTG---------- 728 (903)
T ss_pred CCCcchhhcccCCCCcccccCHHHHhccc-cCcccchhhcCceEEEEecCCccCCCch--HHhhhhhhcC----------
Confidence 76543 34567899999999997654 67799999999999999885 9999643 2333344331
Q ss_pred hcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCC
Q 012233 366 CMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDD 425 (468)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~ 425 (468)
+++-.. +.+.-..++.|||.+||.+||..||+|.++|+||||=+
T Consensus 729 ----~~~L~~------------L~~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~HPlFW~ 772 (903)
T KOG1027|consen 729 ----NYTLVH------------LEPLPDCEAKDLISRMLNPDPQLRPSATDVLNHPLFWD 772 (903)
T ss_pred ----ccceee------------eccCchHHHHHHHHHhcCCCcccCCCHHHHhCCCccCC
Confidence 111111 11111228999999999999999999999999999854
No 389
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=100.00 E-value=2.4e-34 Score=269.85 Aligned_cols=238 Identities=39% Similarity=0.663 Sum_probs=191.0
Q ss_pred CceEEEEEEEcCCCCEEEEEEeecc-----cchHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEEEeecccc-hHH
Q 012233 149 SFGVVFQAKCLETGDSVAIKKVLQD-----KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVLEYISE-TVY 222 (468)
Q Consensus 149 ~fg~Vy~~~~~~~g~~vaiK~~~~~-----~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv~e~~~~-~ll 222 (468)
+||.||+|.+..+|+.+|+|++... .....+|+.+++.++|+||+++++++.. ....+++|||+++ .+.
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~-----~~~~~l~~e~~~~~~L~ 75 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFED-----EDKLYLVMEYCDGGDLF 75 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheee-----CCEEEEEEeCCCCCCHH
Confidence 5899999999888999999998543 2455689999999999999999998843 3458899999998 444
Q ss_pred HHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCCCCCCcccccc
Q 012233 223 RVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGEPNISYICS 302 (468)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~~~~~~~~~gt 302 (468)
..+.. ...++...++.++.+++.+|.|||+ .||+|+||+|.||+++.++ .++|+|||.+.............++
T Consensus 76 ~~~~~----~~~~~~~~~~~~~~~l~~~l~~lh~-~~i~h~~i~~~ni~~~~~~-~~~l~d~~~~~~~~~~~~~~~~~~~ 149 (244)
T smart00220 76 DLLKK----RGRLSEDEARFYARQILSALEYLHS-NGIIHRDLKPENILLDEDG-HVKLADFGLARQLDPGGLLTTFVGT 149 (244)
T ss_pred HHHHh----ccCCCHHHHHHHHHHHHHHHHHHHH-cCeecCCcCHHHeEECCCC-cEEEccccceeeeccccccccccCC
Confidence 43322 2238889999999999999999998 8999999999999999887 7999999999877555445567788
Q ss_pred CCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCCccCCCCcccCC
Q 012233 303 RYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAH 382 (468)
Q Consensus 303 ~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (468)
..|++||.+.+. .++.++|+||||+++|+|++|..||......+...+........ ..
T Consensus 150 ~~~~~pE~~~~~-~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~----------------~~----- 207 (244)
T smart00220 150 PEYMAPEVLLGK-GYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPP----------------FP----- 207 (244)
T ss_pred cCCCCHHHHccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCC----------------Cc-----
Confidence 999999998644 47889999999999999999999998744444433332210000 00
Q ss_pred CcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCC
Q 012233 383 PWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFF 423 (468)
Q Consensus 383 ~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f 423 (468)
.....++.++.+++.+||..||.+||++.++++||||
T Consensus 208 ----~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~~~~~ 244 (244)
T smart00220 208 ----PPEWKISPEAKDLIRKLLVKDPEKRLTAEEALQHPFF 244 (244)
T ss_pred ----cccccCCHHHHHHHHHHccCCchhccCHHHHhhCCCC
Confidence 0111167899999999999999999999999999997
No 390
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=100.00 E-value=2.6e-35 Score=281.04 Aligned_cols=281 Identities=30% Similarity=0.508 Sum_probs=211.7
Q ss_pred ccceEEeceecccCceEEEEEEEcC---CCCEEEEEEeecc--cchHHHHHHHHHHcC-CCCcccccceeeecCCCCceE
Q 012233 136 TISYMAERVVGTGSFGVVFQAKCLE---TGDSVAIKKVLQD--KRYKNRELQIMRLLN-HPNVVSLKHCFFSTTEKDELY 209 (468)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~~~---~g~~vaiK~~~~~--~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~~~~ 209 (468)
...|..+++||.|.|+.||++.+.. ....||+|.+... .....+|+++|..+. +.||+++.+++ .....
T Consensus 35 ~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p~ri~~El~~L~~~gG~~ni~~~~~~~-----rnnd~ 109 (418)
T KOG1167|consen 35 SNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSPSRILNELEMLYRLGGSDNIIKLNGCF-----RNNDQ 109 (418)
T ss_pred hhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCchHHHHHHHHHHHhccchhhhcchhhh-----ccCCe
Confidence 3469999999999999999999877 7889999988543 344568999999985 89999999998 55666
Q ss_pred EEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccc
Q 012233 210 LNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (468)
Q Consensus 210 ~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~ 289 (468)
+++||||++..-...+ ...++...++.|++.++.||.++|. +|||||||||.|+|.+.....-.|+|||+|..
T Consensus 110 v~ivlp~~~H~~f~~l------~~~l~~~~i~~Yl~~ll~Al~~~h~-~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~ 182 (418)
T KOG1167|consen 110 VAIVLPYFEHDRFRDL------YRSLSLAEIRWYLRNLLKALAHLHK-NGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQR 182 (418)
T ss_pred eEEEecccCccCHHHH------HhcCCHHHHHHHHHHHHHHhhhhhc-cCccccCCCccccccccccCCceEEechhHHH
Confidence 8999999996533322 2346678899999999999999997 99999999999999998877789999999852
Q ss_pred c-----------------CC--CC--------------------------CCccccccCCccccccccCCCCCCcchhHH
Q 012233 290 L-----------------VP--GE--------------------------PNISYICSRYYRAPELIFGATEYTTAIDMW 324 (468)
Q Consensus 290 ~-----------------~~--~~--------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~Dvw 324 (468)
. .+ +. ......||+.|+|||++...+..++++|||
T Consensus 183 ~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiw 262 (418)
T KOG1167|consen 183 YDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIW 262 (418)
T ss_pred HHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCcccee
Confidence 1 00 00 001356899999999999888889999999
Q ss_pred HHHHHHHHHHhCCCCCCC-CCcHHHHHHHHHHhCCCCHHHHhh------------------cCCCCccCCCCc-ccC---
Q 012233 325 SIGCVLAELLLGQPLFPG-ESGVDQLVEIIKILGTPTREEIKC------------------MNPNYTEFKFPQ-IKA--- 381 (468)
Q Consensus 325 SlG~il~ell~G~~pf~~-~~~~~~~~~i~~~~~~~~~~~~~~------------------~~~~~~~~~~~~-~~~--- 381 (468)
|.|||+.-+++++.||-. .+..+.+.+|...+|.......-. ....|....... .+.
T Consensus 263 s~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~ 342 (418)
T KOG1167|consen 263 SAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQP 342 (418)
T ss_pred eccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhccccccc
Confidence 999999999999999864 455566777776665433222111 111111110000 000
Q ss_pred CCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCCC
Q 012233 382 HPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRD 428 (468)
Q Consensus 382 ~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~~ 428 (468)
..+........+..+.+|+.+||..||.+|+||+++|.||||.+...
T Consensus 343 n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~~~~ 389 (418)
T KOG1167|consen 343 NTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDEADR 389 (418)
T ss_pred ceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcchhh
Confidence 12333334445668999999999999999999999999999996543
No 391
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=6.5e-36 Score=302.37 Aligned_cols=244 Identities=24% Similarity=0.352 Sum_probs=205.6
Q ss_pred ceEEeceecccCceEEEEEEEcCCCC---EEEEEEeec-----ccchHHHHHHHHHHcCCCCcccccceeeecCCCCceE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGD---SVAIKKVLQ-----DKRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELY 209 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~---~vaiK~~~~-----~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~ 209 (468)
.-.|+++||.|.||.|+.|+.+..|+ .||||.++. .+..+..|..||-+++||||++|.++. ....-
T Consensus 630 ~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVV-----Tks~P 704 (996)
T KOG0196|consen 630 CVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVV-----TKSKP 704 (996)
T ss_pred heEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEE-----ecCce
Confidence 45788999999999999999887764 599999854 345566799999999999999999988 44445
Q ss_pred EEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccc
Q 012233 210 LNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (468)
Q Consensus 210 ~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~ 289 (468)
+.||+|||.++.|+.+... ....|...++..|++.|+.|++||-+ .|+|||||-..||||+.+- .+|++|||+++.
T Consensus 705 vMIiTEyMENGsLDsFLR~--~DGqftviQLVgMLrGIAsGMkYLsd-m~YVHRDLAARNILVNsnL-vCKVsDFGLSRv 780 (996)
T KOG0196|consen 705 VMIITEYMENGSLDSFLRQ--NDGQFTVIQLVGMLRGIASGMKYLSD-MNYVHRDLAARNILVNSNL-VCKVSDFGLSRV 780 (996)
T ss_pred eEEEhhhhhCCcHHHHHhh--cCCceEeehHHHHHHHHHHHhHHHhh-cCchhhhhhhhheeeccce-EEEeccccceee
Confidence 8899999998877654332 34669999999999999999999998 8999999999999999987 899999999998
Q ss_pred cCCCC-CCcccc-c--cCCccccccccCCCCCCcchhHHHHHHHHHHHH-hCCCCCCCCCcHHHHHHHHHHhCCCCHHHH
Q 012233 290 LVPGE-PNISYI-C--SRYYRAPELIFGATEYTTAIDMWSIGCVLAELL-LGQPLFPGESGVDQLVEIIKILGTPTREEI 364 (468)
Q Consensus 290 ~~~~~-~~~~~~-g--t~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell-~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 364 (468)
+.++. ...+.. | ..+|.|||.+.-. +++.++||||+|++|||.+ .|..||-..++.+.+..|.+.++.|++
T Consensus 781 ledd~~~~ytt~GGKIPiRWTAPEAIa~R-KFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~gyRLPpP--- 856 (996)
T KOG0196|consen 781 LEDDPEAAYTTLGGKIPIRWTAPEAIAYR-KFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQGYRLPPP--- 856 (996)
T ss_pred cccCCCccccccCCccceeecChhHhhhc-ccCchhhccccceEEEEecccCCCcccccchHHHHHHHHhccCCCCC---
Confidence 75544 222222 2 5789999999644 5999999999999999977 599999999999999998887666542
Q ss_pred hhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 365 KCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
-++|..+..|+..||++|-.+||.+.|++.
T Consensus 857 -------------------------mDCP~aL~qLMldCWqkdR~~RP~F~qiV~ 886 (996)
T KOG0196|consen 857 -------------------------MDCPAALYQLMLDCWQKDRNRRPKFAQIVS 886 (996)
T ss_pred -------------------------CCCcHHHHHHHHHHHHHHhhcCCCHHHHHH
Confidence 358999999999999999999999998775
No 392
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=6.8e-34 Score=319.62 Aligned_cols=257 Identities=21% Similarity=0.294 Sum_probs=185.3
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeecccchHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEEEeecc
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVLEYI 217 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv~e~~ 217 (468)
.|...++||+|+||.||+|.+..+|..||+|.+........+|++++++++|||||++++++.. ....|+||||+
T Consensus 691 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~l~~l~HpnIv~~~~~~~~-----~~~~~lv~Ey~ 765 (968)
T PLN00113 691 SLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSIPSSEIADMGKLQHPNIVKLIGLCRS-----EKGAYLIHEYI 765 (968)
T ss_pred hCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccccHHHHHHHhhCCCCCcceEEEEEEc-----CCCCEEEEeCC
Confidence 3566778999999999999998899999999987665555678999999999999999999843 33478999999
Q ss_pred cchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhH---hcCCccccCCCCCCeeecCCCCcEEEeeecCccccCCCC
Q 012233 218 SETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLH---HVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGE 294 (468)
Q Consensus 218 ~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH---~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~~~ 294 (468)
+++.+..... .+++..+..++.||+.||+||| + .+|+||||||+||+++.++ ..++. ||.......
T Consensus 766 ~~g~L~~~l~------~l~~~~~~~i~~~ia~~L~yLH~~~~-~~iiH~dlkp~Nil~~~~~-~~~~~-~~~~~~~~~-- 834 (968)
T PLN00113 766 EGKNLSEVLR------NLSWERRRKIAIGIAKALRFLHCRCS-PAVVVGNLSPEKIIIDGKD-EPHLR-LSLPGLLCT-- 834 (968)
T ss_pred CCCcHHHHHh------cCCHHHHHHHHHHHHHHHHHhccCCC-CCeecCCCCHHhEEECCCC-ceEEE-ecccccccc--
Confidence 9765543321 3788889999999999999999 5 6999999999999999876 56664 666543221
Q ss_pred CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcH-HHHHHHHHHhCCCCHHHHhhcCCCCcc
Q 012233 295 PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGV-DQLVEIIKILGTPTREEIKCMNPNYTE 373 (468)
Q Consensus 295 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~ 373 (468)
.....+|+.|+|||++.+. .++.++|||||||++|||++|+.||...... ..+.++.+....... ...
T Consensus 835 -~~~~~~t~~y~aPE~~~~~-~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~---------~~~ 903 (968)
T PLN00113 835 -DTKCFISSAYVAPETRETK-DITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCH---------LDM 903 (968)
T ss_pred -CCCccccccccCcccccCC-CCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccc---------hhh
Confidence 2234678999999998654 4899999999999999999999999543211 112222111100000 000
Q ss_pred CCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCC
Q 012233 374 FKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDL 426 (468)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~ 426 (468)
+.-+.+.... ........++.+++.+||+.||.+|||+.|+++. ++.+
T Consensus 904 ~~~~~~~~~~---~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~--L~~~ 951 (968)
T PLN00113 904 WIDPSIRGDV---SVNQNEIVEVMNLALHCTATDPTARPCANDVLKT--LESA 951 (968)
T ss_pred eeCccccCCC---CccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHH--HHHh
Confidence 0001000000 0011122367899999999999999999999873 5544
No 393
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-34 Score=250.05 Aligned_cols=213 Identities=24% Similarity=0.433 Sum_probs=175.7
Q ss_pred ccceEEeceecccCceEEEEEEEcCCCCEEEEEEeecccch-----HHHHHHHH-HHcCCCCcccccceeeecCCCCceE
Q 012233 136 TISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRY-----KNRELQIM-RLLNHPNVVSLKHCFFSTTEKDELY 209 (468)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~~~-----~~~E~~il-~~l~hpnIv~l~~~~~~~~~~~~~~ 209 (468)
.+....+..||+|++|.|-+-++..+|...|+|.+...... ..+|+.+. +...+|.+|.+|+.++...+
T Consensus 45 ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regd----- 119 (282)
T KOG0984|consen 45 ADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGD----- 119 (282)
T ss_pred hhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhcccc-----
Confidence 34455667899999999999999999999999988544322 22455543 33469999999998855544
Q ss_pred EEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccc
Q 012233 210 LNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (468)
Q Consensus 210 ~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~ 289 (468)
++|.||.+.-++-.+..+....+..+++..+-+++..++.||.|||+...|||||+||+|||++.+| +||+||||++-.
T Consensus 120 vwIcME~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~G-qVKiCDFGIsG~ 198 (282)
T KOG0984|consen 120 VWICMELMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDG-QVKICDFGISGY 198 (282)
T ss_pred EEEeHHHhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCC-cEEEccccccee
Confidence 8999999998877777777778899999999999999999999999877999999999999999999 799999999988
Q ss_pred cCCCCCCccccccCCccccccccC---CCCCCcchhHHHHHHHHHHHHhCCCCCCC-CCcHHHHHHHHH
Q 012233 290 LVPGEPNISYICSRYYRAPELIFG---ATEYTTAIDMWSIGCVLAELLLGQPLFPG-ESGVDQLVEIIK 354 (468)
Q Consensus 290 ~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~~DvwSlG~il~ell~G~~pf~~-~~~~~~~~~i~~ 354 (468)
+.+.-......|...|||||.+.. ...|+.++||||||+.++||.+++.||.. .++.+++.++++
T Consensus 199 L~dSiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVe 267 (282)
T KOG0984|consen 199 LVDSIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVE 267 (282)
T ss_pred ehhhhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHhc
Confidence 766655555778889999999843 23589999999999999999999999976 455566666554
No 394
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.1e-33 Score=266.33 Aligned_cols=264 Identities=23% Similarity=0.311 Sum_probs=187.1
Q ss_pred ccCCCCCCCCcc-----cceEEeceecccCceEEEEEEEcCCCCEEEEEEeecc-cchHHHHHHHHH--HcCCCCccccc
Q 012233 125 TVGGRNGQPKQT-----ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD-KRYKNRELQIMR--LLNHPNVVSLK 196 (468)
Q Consensus 125 ~~~~~~~~~~~~-----~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~-~~~~~~E~~il~--~l~hpnIv~l~ 196 (468)
+.|+..|.|... .+-++.+.||+|.||.||+|.| .|+.||||++... +....+|.+|.+ .|+|+||+.++
T Consensus 194 tSGSGSGlplLVQRTiarqI~L~e~IGkGRyGEVwrG~w--rGe~VAVKiF~srdE~SWfrEtEIYqTvmLRHENILgFI 271 (513)
T KOG2052|consen 194 TSGSGSGLPLLVQRTIARQIVLQEIIGKGRFGEVWRGRW--RGEDVAVKIFSSRDERSWFRETEIYQTVMLRHENILGFI 271 (513)
T ss_pred cCCCCCCchhHhHHhhhheeEEEEEecCccccceeeccc--cCCceEEEEecccchhhhhhHHHHHHHHHhccchhhhhh
Confidence 444445554322 2578999999999999999999 7999999999654 445567777765 56999999988
Q ss_pred ceeeecCCCCceEEEEEeecccch-HHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHh-------cCCccccCCCCC
Q 012233 197 HCFFSTTEKDELYLNLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHH-------VVGVCHRDIKPQ 268 (468)
Q Consensus 197 ~~~~~~~~~~~~~~~lv~e~~~~~-ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~-------~~givHrDlkp~ 268 (468)
+.=.... ..-..++||++|.+.| |++.+. ...++.....+++..++.||++||. ...|.|||||..
T Consensus 272 aaD~~~~-gs~TQLwLvTdYHe~GSL~DyL~-----r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSK 345 (513)
T KOG2052|consen 272 AADNKDN-GSWTQLWLVTDYHEHGSLYDYLN-----RNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSK 345 (513)
T ss_pred hccccCC-CceEEEEEeeecccCCcHHHHHh-----hccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccc
Confidence 7542222 3344699999999954 554433 2568888999999999999999993 135999999999
Q ss_pred CeeecCCCCcEEEeeecCccccCCCC-----CCccccccCCccccccccCCCC-----CCcchhHHHHHHHHHHHHh---
Q 012233 269 NLLVNPHTHQLKICDFGSAKMLVPGE-----PNISYICSRYYRAPELIFGATE-----YTTAIDMWSIGCVLAELLL--- 335 (468)
Q Consensus 269 NILl~~~~~~vkL~DFG~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~-----~~~~~DvwSlG~il~ell~--- 335 (468)
||||..++ ++.|+|+|+|-...... ..+..+||.+|||||++..... .-..+||||||.|+||+..
T Consensus 346 NILVKkn~-~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~ 424 (513)
T KOG2052|consen 346 NILVKKNG-TCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCE 424 (513)
T ss_pred cEEEccCC-cEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhh
Confidence 99999998 89999999997664432 3456899999999999954432 1236899999999999985
Q ss_pred --C-----CCCCCCCCcH----HHHHHHHHHhCCCCHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhc
Q 012233 336 --G-----QPLFPGESGV----DQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLL 404 (468)
Q Consensus 336 --G-----~~pf~~~~~~----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L 404 (468)
| ++||.+.-+. +.+.+++ ..-++.......|... .+-..+..|++.||
T Consensus 425 ~ggi~eey~~Pyyd~Vp~DPs~eeMrkVV------------------Cv~~~RP~ipnrW~s~---~~l~~m~klMkeCW 483 (513)
T KOG2052|consen 425 SGGIVEEYQLPYYDVVPSDPSFEEMRKVV------------------CVQKLRPNIPNRWKSD---PALRVMAKLMKECW 483 (513)
T ss_pred cCCEehhhcCCcccCCCCCCCHHHHhcce------------------eecccCCCCCcccccC---HHHHHHHHHHHHhh
Confidence 2 4777653222 2222211 1111111112222110 11235678899999
Q ss_pred ccCCCCCCCHHHHh
Q 012233 405 QYSPSLRCTALEAC 418 (468)
Q Consensus 405 ~~dP~~R~s~~ell 418 (468)
..||.-|.||-.+.
T Consensus 484 ~~Np~aRltALriK 497 (513)
T KOG2052|consen 484 YANPAARLTALRIK 497 (513)
T ss_pred cCCchhhhHHHHHH
Confidence 99999999987654
No 395
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7.3e-33 Score=267.08 Aligned_cols=268 Identities=25% Similarity=0.306 Sum_probs=186.4
Q ss_pred eEEeceecccCceEEEEEEEcCCCCEEEEEEeecc-cchHHHHHHHHHH--cCCCCcccccceeeecCCCCceEEEEEee
Q 012233 139 YMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD-KRYKNRELQIMRL--LNHPNVVSLKHCFFSTTEKDELYLNLVLE 215 (468)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~-~~~~~~E~~il~~--l~hpnIv~l~~~~~~~~~~~~~~~~lv~e 215 (468)
..+.++||+|.||.||+|.. +++.||||++... +..+..|.+|.+. ++|+||+++++.--..+ .+...++||++
T Consensus 212 l~l~eli~~Grfg~V~KaqL--~~~~VAVKifp~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t-~~~~eywLVt~ 288 (534)
T KOG3653|consen 212 LQLLELIGRGRFGCVWKAQL--DNRLVAVKIFPEQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGT-ADRMEYWLVTE 288 (534)
T ss_pred hhhHHHhhcCccceeehhhc--cCceeEEEecCHHHHHHHHhHHHHHhccCccchhHHHhhchhccCC-ccccceeEEee
Confidence 56678899999999999987 6799999999654 4455667777664 57999999987643333 23445789999
Q ss_pred cccchH-HHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhc--------CCccccCCCCCCeeecCCCCcEEEeeecC
Q 012233 216 YISETV-YRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHV--------VGVCHRDIKPQNLLVNPHTHQLKICDFGS 286 (468)
Q Consensus 216 ~~~~~l-l~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~--------~givHrDlkp~NILl~~~~~~vkL~DFG~ 286 (468)
|.+.|. .++++ ...+++....+++..+++||+|||+. .+|+|||||..||||.+|. ++.|+|||+
T Consensus 289 fh~kGsL~dyL~-----~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~Dl-TccIaDFGL 362 (534)
T KOG3653|consen 289 FHPKGSLCDYLK-----ANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDL-TCCIADFGL 362 (534)
T ss_pred eccCCcHHHHHH-----hccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCC-cEEeeccce
Confidence 998554 44433 35589999999999999999999951 3699999999999999998 899999999
Q ss_pred ccccCCCCC---CccccccCCccccccccCCCCCC-----cchhHHHHHHHHHHHHhCCCCCC-CCCcHHHHHHHHHHhC
Q 012233 287 AKMLVPGEP---NISYICSRYYRAPELIFGATEYT-----TAIDMWSIGCVLAELLLGQPLFP-GESGVDQLVEIIKILG 357 (468)
Q Consensus 287 a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~-----~~~DvwSlG~il~ell~G~~pf~-~~~~~~~~~~i~~~~~ 357 (468)
|..+.++.. ....+||.+|||||++.+...+. .+.||||+|.|||||++...-+. +..+.-++.=-.+...
T Consensus 363 Al~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~ 442 (534)
T KOG3653|consen 363 ALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGN 442 (534)
T ss_pred eEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcC
Confidence 988865543 33578999999999997766555 36899999999999998654332 1111111100111222
Q ss_pred CCCHHHHhhcC-CCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHH------HhCCCC
Q 012233 358 TPTREEIKCMN-PNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALE------ACAHPF 422 (468)
Q Consensus 358 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~e------ll~hp~ 422 (468)
.|+.+.+.... ..-..-.+|. .|.. -..-.-+++.|..||+.||+.|+|+.= .+.|.|
T Consensus 443 hPt~e~mq~~VV~kK~RP~~p~----~W~~---h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~ 507 (534)
T KOG3653|consen 443 HPTLEEMQELVVRKKQRPKIPD----AWRK---HAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLW 507 (534)
T ss_pred CCCHHHHHHHHHhhccCCCChh----hhhc---CccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccC
Confidence 33333322211 0000001110 1111 123456899999999999999999863 445665
No 396
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=100.00 E-value=5.7e-33 Score=272.90 Aligned_cols=201 Identities=26% Similarity=0.421 Sum_probs=174.3
Q ss_pred CCCcccceEEeceecccCceEEEEEEEcCCCCEEEEEEeecccchH------------HHHHHHHHHcC---CCCccccc
Q 012233 132 QPKQTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRYK------------NRELQIMRLLN---HPNVVSLK 196 (468)
Q Consensus 132 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~~~~------------~~E~~il~~l~---hpnIv~l~ 196 (468)
.+++.-+|...+.||.|+||.|++|.++.+...|+||.|.+.+... -.|+.||..|+ |+||+|++
T Consensus 556 ~~~k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlL 635 (772)
T KOG1152|consen 556 EYKKFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLL 635 (772)
T ss_pred eecccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhh
Confidence 3455567999999999999999999999999999999887654332 25999999998 99999999
Q ss_pred ceeeecCCCCceEEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCC
Q 012233 197 HCFFSTTEKDELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHT 276 (468)
Q Consensus 197 ~~~~~~~~~~~~~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~ 276 (468)
++| ++..|+||+||--+.+ .++.. +...+..+++.++..++.|++.|+++||+ .||||||||-+|+.|+.+|
T Consensus 636 dfF-----Eddd~yyl~te~hg~g-IDLFd-~IE~kp~m~E~eAk~IFkQV~agi~hlh~-~~ivhrdikdenvivd~~g 707 (772)
T KOG1152|consen 636 DFF-----EDDDYYYLETEVHGEG-IDLFD-FIEFKPRMDEPEAKLIFKQVVAGIKHLHD-QGIVHRDIKDENVIVDSNG 707 (772)
T ss_pred hee-----ecCCeeEEEecCCCCC-cchhh-hhhccCccchHHHHHHHHHHHhccccccc-cCceecccccccEEEecCC
Confidence 999 8888899999988765 33332 33446779999999999999999999998 8999999999999999999
Q ss_pred CcEEEeeecCccccCCCCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCC
Q 012233 277 HQLKICDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPG 342 (468)
Q Consensus 277 ~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~ 342 (468)
.+||+|||.|.... ..+.-.++||..|.|||++.|.+..+..-|||++|++||.++....||.+
T Consensus 708 -~~klidfgsaa~~k-sgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn 771 (772)
T KOG1152|consen 708 -FVKLIDFGSAAYTK-SGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN 771 (772)
T ss_pred -eEEEeeccchhhhc-CCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence 79999999997654 44566899999999999998888788999999999999999999999864
No 397
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.97 E-value=2.9e-33 Score=279.10 Aligned_cols=255 Identities=25% Similarity=0.371 Sum_probs=207.3
Q ss_pred cceEEeceecccCceEEEEEEEcCCCCEEEEEEeecc----cchHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEE
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD----KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNL 212 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~----~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~l 212 (468)
++|.+...+|.|.||.||+++++.+++..|+|+++.. -.....|+-+++.++|||||.+++.|.... .++|
T Consensus 15 ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~d-----klwi 89 (829)
T KOG0576|consen 15 DDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRD-----KLWI 89 (829)
T ss_pred cchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhc-----CcEE
Confidence 4699999999999999999999999999999998643 334567999999999999999999985433 3899
Q ss_pred EeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCC
Q 012233 213 VLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP 292 (468)
Q Consensus 213 v~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~ 292 (468)
.||||+|+.++.+.+ ....+++.++..+++..+.||+|||+ .|=+|||||-.|||++..+ .+||.|||.+..+..
T Consensus 90 cMEycgggslQdiy~---~TgplselqiayvcRetl~gl~ylhs-~gk~hRdiKGanilltd~g-DvklaDfgvsaqita 164 (829)
T KOG0576|consen 90 CMEYCGGGSLQDIYH---VTGPLSELQIAYVCRETLQGLKYLHS-QGKIHRDIKGANILLTDEG-DVKLADFGVSAQITA 164 (829)
T ss_pred EEEecCCCcccceee---ecccchhHHHHHHHhhhhccchhhhc-CCcccccccccceeecccC-ceeecccCchhhhhh
Confidence 999999887765544 35778999999999999999999998 8999999999999999888 799999999866532
Q ss_pred -CCCCccccccCCcccccccc--CCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCC
Q 012233 293 -GEPNISYICSRYYRAPELIF--GATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNP 369 (468)
Q Consensus 293 -~~~~~~~~gt~~y~aPE~~~--~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 369 (468)
-.....++||++|||||+.. ....|...+|+|++|+...|+---++|.....++..+..+-+-.-.|+
T Consensus 165 ti~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp--------- 235 (829)
T KOG0576|consen 165 TIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPP--------- 235 (829)
T ss_pred hhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCCCC---------
Confidence 23456799999999999863 234599999999999999999888888766655555554443222221
Q ss_pred CCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCC
Q 012233 370 NYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDD 425 (468)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~ 425 (468)
.++. ...-++.+.+|++.+|.++|.+||+++.+|.|||...
T Consensus 236 --------~lkD-------k~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~ 276 (829)
T KOG0576|consen 236 --------TLKD-------KTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQ 276 (829)
T ss_pred --------cccC-------CccchHHHHHHHHHHhcCCCccCCChhhheeceeecc
Confidence 1111 1224667899999999999999999999999999865
No 398
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=4.9e-31 Score=279.24 Aligned_cols=247 Identities=26% Similarity=0.393 Sum_probs=188.5
Q ss_pred ceEEeceecccCceEEEEEEEcC-------CCCEEEEEEeecc-----cchHHHHHHHHHHcC-CCCcccccceeeecCC
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLE-------TGDSVAIKKVLQD-----KRYKNRELQIMRLLN-HPNVVSLKHCFFSTTE 204 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~-------~g~~vaiK~~~~~-----~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~ 204 (468)
+..+.+.||+|.||.|++|.... ....||||.++.. ...+..|+++|+.+. |+||+.+++++..
T Consensus 297 ~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~--- 373 (609)
T KOG0200|consen 297 NLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQ--- 373 (609)
T ss_pred hccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeecc---
Confidence 34566799999999999997531 1456999987543 344567999999996 9999999999843
Q ss_pred CCceEEEEEeecccc-hHHHHHhhhh---h-------cC--CCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCee
Q 012233 205 KDELYLNLVLEYISE-TVYRVSKHYT---R-------MN--QHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLL 271 (468)
Q Consensus 205 ~~~~~~~lv~e~~~~-~ll~~~~~~~---~-------~~--~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NIL 271 (468)
...+++|+||+.. .++..+++.. . .. ..++...+..++.||+.|++||++ .++|||||-..|||
T Consensus 374 --~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~-~~~vHRDLAaRNVL 450 (609)
T KOG0200|consen 374 --DGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLAS-VPCVHRDLAARNVL 450 (609)
T ss_pred --CCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhh-CCccchhhhhhhEE
Confidence 4458899999984 5555554433 0 01 138888999999999999999998 89999999999999
Q ss_pred ecCCCCcEEEeeecCccccCCCCCCc--ccc--ccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcH
Q 012233 272 VNPHTHQLKICDFGSAKMLVPGEPNI--SYI--CSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGV 346 (468)
Q Consensus 272 l~~~~~~vkL~DFG~a~~~~~~~~~~--~~~--gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~ 346 (468)
|..+. .+||+|||+|+......... ... -...|||||.+.. ..|+.++||||||++|||+++ |..||++....
T Consensus 451 i~~~~-~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~-~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~ 528 (609)
T KOG0200|consen 451 ITKNK-VIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFD-RVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPT 528 (609)
T ss_pred ecCCC-EEEEccccceeccCCCCceEecCCCCccceeecCHHHhcc-CcccccchhhHHHHHHHHHhhCCCCCCCCCCcH
Confidence 99886 89999999998654433221 122 2345999999976 559999999999999999997 89999985533
Q ss_pred HHHHHHHHHhCCCCHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 347 DQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 347 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
..+.+.++.... . ..+..+++++.++++.||+.+|.+||+..++..
T Consensus 529 ~~l~~~l~~G~r---------------~------------~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~ 574 (609)
T KOG0200|consen 529 EELLEFLKEGNR---------------M------------EQPEHCSDEIYDLMKSCWNADPEDRPTFSECVE 574 (609)
T ss_pred HHHHHHHhcCCC---------------C------------CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence 333333221111 0 133568999999999999999999999998876
No 399
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=3.9e-31 Score=268.82 Aligned_cols=241 Identities=25% Similarity=0.369 Sum_probs=190.1
Q ss_pred eEEeceecccCceEEEEEEEcCCCCE----EEEEEeecc-----cchHHHHHHHHHHcCCCCcccccceeeecCCCCceE
Q 012233 139 YMAERVVGTGSFGVVFQAKCLETGDS----VAIKKVLQD-----KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELY 209 (468)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~~~~~g~~----vaiK~~~~~-----~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~ 209 (468)
.+..++||+|+||+||+|.|...|+. ||||++... ...+.+|+-+|..|+|||+++|++++....
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~------ 771 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST------ 771 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch------
Confidence 45567899999999999999766664 788877443 234457999999999999999999985433
Q ss_pred EEEEeecccchH-HHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCcc
Q 012233 210 LNLVLEYISETV-YRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAK 288 (468)
Q Consensus 210 ~~lv~e~~~~~l-l~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~ 288 (468)
+.||++|++.|. ++.++. ....+.......|.+||++||.|||. +++|||||-..||||..-. .+||.|||+++
T Consensus 772 ~qlvtq~mP~G~LlDyvr~---hr~~igsq~lLnw~~QIAkgM~YLe~-qrlVHrdLaaRNVLVksP~-hvkitdfgla~ 846 (1177)
T KOG1025|consen 772 LQLVTQLMPLGCLLDYVRE---HRDNIGSQDLLNWCYQIAKGMKYLEE-QRLVHRDLAARNVLVKSPN-HVKITDFGLAK 846 (1177)
T ss_pred HHHHHHhcccchHHHHHHH---hhccccHHHHHHHHHHHHHHHHHHHh-cchhhhhhhhhheeecCCC-eEEEEecchhh
Confidence 568999999664 443332 34667788899999999999999998 8999999999999998777 59999999999
Q ss_pred ccCCCCCCccccc---cCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHH
Q 012233 289 MLVPGEPNISYIC---SRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGTPTREEI 364 (468)
Q Consensus 289 ~~~~~~~~~~~~g---t~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 364 (468)
.+.++.......+ .+-|||-|.+.. ..|+.++|||||||++||++| |..|+.+....+.- +.++. +
T Consensus 847 ll~~d~~ey~~~~gK~pikwmale~i~~-~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~-dlle~---g----- 916 (1177)
T KOG1025|consen 847 LLAPDEKEYSAPGGKVPIKWMALESIRI-RKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIP-DLLEK---G----- 916 (1177)
T ss_pred ccCcccccccccccccCcHHHHHHHhhc-cCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhh-HHHhc---c-----
Confidence 8877766554443 567999999964 459999999999999999997 99999887654432 22221 0
Q ss_pred hhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 365 KCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
.... .++..+-++.-++.+||..|+..||+++++..
T Consensus 917 -------eRLs------------qPpiCtiDVy~~mvkCwmid~~~rp~fkel~~ 952 (1177)
T KOG1025|consen 917 -------ERLS------------QPPICTIDVYMVMVKCWMIDADSRPTFKELAE 952 (1177)
T ss_pred -------ccCC------------CCCCccHHHHHHHHHHhccCcccCccHHHHHH
Confidence 1111 23558889999999999999999999987653
No 400
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.97 E-value=7.2e-29 Score=226.85 Aligned_cols=207 Identities=36% Similarity=0.588 Sum_probs=172.8
Q ss_pred ecccCceEEEEEEEcCCCCEEEEEEeeccc-----chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEEEeecccc
Q 012233 145 VGTGSFGVVFQAKCLETGDSVAIKKVLQDK-----RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVLEYISE 219 (468)
Q Consensus 145 lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv~e~~~~ 219 (468)
||+|.+|.||++....+++.+++|++.... ....+|+.+++.+.|++|+++++++. .....+++|||+.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~-----~~~~~~~~~e~~~~ 75 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFE-----DENHLYLVMEYCEG 75 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeee-----cCCeEEEEEecCCC
Confidence 689999999999998789999999987654 34678999999999999999999883 33468899999995
Q ss_pred h-HHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecC-CCCcEEEeeecCccccCCCC-CC
Q 012233 220 T-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNP-HTHQLKICDFGSAKMLVPGE-PN 296 (468)
Q Consensus 220 ~-ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~-~~~~vkL~DFG~a~~~~~~~-~~ 296 (468)
. +...+.. ....+++..++.++.+++.+|.+||+ .|++|+||+|.||+++. ++ .++|+|||.+....... ..
T Consensus 76 ~~l~~~~~~---~~~~~~~~~~~~~~~~l~~~l~~lh~-~~~~H~dl~~~ni~~~~~~~-~~~l~d~~~~~~~~~~~~~~ 150 (215)
T cd00180 76 GSLKDLLKE---NEGKLSEDEILRILLQILEGLEYLHS-NGIIHRDLKPENILLDSDNG-KVKLADFGLSKLLTSDKSLL 150 (215)
T ss_pred CcHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHh-CCeeccCCCHhhEEEeCCCC-cEEEecCCceEEccCCcchh
Confidence 4 4433222 11468889999999999999999998 89999999999999998 56 79999999997654332 13
Q ss_pred ccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCCccCCC
Q 012233 297 ISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKF 376 (468)
Q Consensus 297 ~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 376 (468)
....+...|++||.+.....++.+.|+|++|+++++|
T Consensus 151 ~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l------------------------------------------- 187 (215)
T cd00180 151 KTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL------------------------------------------- 187 (215)
T ss_pred hcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH-------------------------------------------
Confidence 3456788999999986543588999999999999999
Q ss_pred CcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCC
Q 012233 377 PQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHP 421 (468)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp 421 (468)
..+.+++.+||+.||.+||++.+++.|+
T Consensus 188 -----------------~~~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 188 -----------------PELKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred -----------------HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 1267999999999999999999999875
No 401
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.97 E-value=9.7e-31 Score=236.10 Aligned_cols=247 Identities=21% Similarity=0.308 Sum_probs=181.1
Q ss_pred ccceEEeceecccCceEEEEEEEcCCCCEEEEEEeecc---cchHHHHHHHHHHc-CCCCcccccceeeecCCCCceEEE
Q 012233 136 TISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD---KRYKNRELQIMRLL-NHPNVVSLKHCFFSTTEKDELYLN 211 (468)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~---~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~~~~~~ 211 (468)
.+.|.|.+.||+|.||.+.+|.++.+...+++|.+... ...+.+|..---.| .|.||+.-|+.-+...+ +++
T Consensus 23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d----~Yv 98 (378)
T KOG1345|consen 23 EDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSD----AYV 98 (378)
T ss_pred hhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceeeccchhhhHHHHHHhhcCc----eEE
Confidence 34699999999999999999999999999999988654 34455666543334 48999998887665443 677
Q ss_pred EEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeee-cCCCCcEEEeeecCcccc
Q 012233 212 LVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLV-NPHTHQLKICDFGSAKML 290 (468)
Q Consensus 212 lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl-~~~~~~vkL~DFG~a~~~ 290 (468)
+++||++.+.|.. . -...++-+...+.++.|+++||.|||+ +++||||||.+|||| +.+...|||||||.++..
T Consensus 99 F~qE~aP~gdL~s--n--v~~~GigE~~~K~v~~ql~SAi~fMHs-knlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~ 173 (378)
T KOG1345|consen 99 FVQEFAPRGDLRS--N--VEAAGIGEANTKKVFAQLLSAIEFMHS-KNLVHRDLKAENILIFDADFYRVKLCDFGLTRKV 173 (378)
T ss_pred EeeccCccchhhh--h--cCcccccHHHHHHHHHHHHHHHHHhhc-cchhhcccccceEEEecCCccEEEeeeccccccc
Confidence 9999999664431 1 123668888899999999999999998 999999999999998 556668999999998754
Q ss_pred CCCCCCccccccCCccccccccCC----CCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHHHhCCCCHHHHh
Q 012233 291 VPGEPNISYICSRYYRAPELIFGA----TEYTTAIDMWSIGCVLAELLLGQPLFPGESGVD-QLVEIIKILGTPTREEIK 365 (468)
Q Consensus 291 ~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~ 365 (468)
.... ...-.+..|.+||++... ....+.+|+|.||+|+|.+++|.+||+.....+ .+.+..+-.+.-..
T Consensus 174 g~tV--~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~---- 247 (378)
T KOG1345|consen 174 GTTV--KYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNP---- 247 (378)
T ss_pred Ccee--hhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCc----
Confidence 2211 112335679999987432 225678999999999999999999998543332 23333332211100
Q ss_pred hcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHH
Q 012233 366 CMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTAL 415 (468)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ 415 (468)
..| .....+++.+..+.++-|..+|.+|.-..
T Consensus 248 ---------~~P---------~~F~~fs~~a~r~Fkk~lt~~~~drcki~ 279 (378)
T KOG1345|consen 248 ---------ALP---------KKFNPFSEKALRLFKKSLTPRFKDRCKIW 279 (378)
T ss_pred ---------cCc---------hhhcccCHHHHHHHHHhcCCcccccchhH
Confidence 111 12234788999999999999999995433
No 402
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.96 E-value=2.7e-30 Score=283.66 Aligned_cols=208 Identities=19% Similarity=0.201 Sum_probs=147.1
Q ss_pred HHcCC-CCcccccceeeecCC--CCceEEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCcc
Q 012233 185 RLLNH-PNVVSLKHCFFSTTE--KDELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVC 261 (468)
Q Consensus 185 ~~l~h-pnIv~l~~~~~~~~~--~~~~~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~giv 261 (468)
+.++| +||+++++.|..... .....++++|||++++|...+.. ....+++..++.+++||+.||.|||+ +||+
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~al~~lH~-~gIv 102 (793)
T PLN00181 27 KSLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECEDVSLRQWLDN---PDRSVDAFECFHVFRQIVEIVNAAHS-QGIV 102 (793)
T ss_pred chhhHHHHHHHhhcccCCccccccccchhhhhhccCCccHHHHHhc---ccccccHHHHHHHHHHHHHHHHHHHh-CCee
Confidence 34555 588888887622221 11234678899998887776542 24568999999999999999999997 9999
Q ss_pred ccCCCCCCeeecCCC------------------CcEEEeeecCccccCCCC-----------------CCccccccCCcc
Q 012233 262 HRDIKPQNLLVNPHT------------------HQLKICDFGSAKMLVPGE-----------------PNISYICSRYYR 306 (468)
Q Consensus 262 HrDlkp~NILl~~~~------------------~~vkL~DFG~a~~~~~~~-----------------~~~~~~gt~~y~ 306 (468)
||||||+||||+..+ ..+||+|||+++...... ......||+.||
T Consensus 103 HrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~ 182 (793)
T PLN00181 103 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYT 182 (793)
T ss_pred eccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceE
Confidence 999999999995432 146777777765321100 011246789999
Q ss_pred ccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCCccCCCCcccCCCccc
Q 012233 307 APELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHK 386 (468)
Q Consensus 307 aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (468)
|||++.+.. |+.++|||||||+||||++|.+||.... ..+..+.... .|+.
T Consensus 183 APE~~~~~~-~~~~sDVwSlGviL~ELl~~~~~~~~~~--~~~~~~~~~~-~~~~------------------------- 233 (793)
T PLN00181 183 SPEEDNGSS-SNCASDVYRLGVLLFELFCPVSSREEKS--RTMSSLRHRV-LPPQ------------------------- 233 (793)
T ss_pred ChhhhccCC-CCchhhhhhHHHHHHHHhhCCCchhhHH--HHHHHHHHhh-cChh-------------------------
Confidence 999997654 8999999999999999999998875321 1111111110 0000
Q ss_pred ccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCC
Q 012233 387 IFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLR 427 (468)
Q Consensus 387 ~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~ 427 (468)
+ ....+.+.+++.+||++||.+||++.|+|+||||...+
T Consensus 234 -~-~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h~~~~~~~ 272 (793)
T PLN00181 234 -I-LLNWPKEASFCLWLLHPEPSCRPSMSELLQSEFINEPR 272 (793)
T ss_pred -h-hhcCHHHHHHHHHhCCCChhhCcChHHHhhchhhhhhh
Confidence 0 01134567899999999999999999999999998753
No 403
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.96 E-value=4.8e-29 Score=235.26 Aligned_cols=248 Identities=19% Similarity=0.224 Sum_probs=187.9
Q ss_pred cceEEeceecccCceEEEEEEEcCCCC-----EEEEEEeecccch-----HHHHHHHHHHcCCCCcccccceeeecCCCC
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLETGD-----SVAIKKVLQDKRY-----KNRELQIMRLLNHPNVVSLKHCFFSTTEKD 206 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~-----~vaiK~~~~~~~~-----~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 206 (468)
.++++..++-+|.||.||.|.|.+... .|.+|.++..... +..|-.++..+.|||++.+.++.....+
T Consensus 284 ~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~-- 361 (563)
T KOG1024|consen 284 CRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYA-- 361 (563)
T ss_pred hheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccC--
Confidence 357788889999999999998865433 3445555444332 2357777788889999999988754332
Q ss_pred ceEEEEEeecccchHHHHHhh-----hhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEE
Q 012233 207 ELYLNLVLEYISETVYRVSKH-----YTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKI 281 (468)
Q Consensus 207 ~~~~~lv~e~~~~~ll~~~~~-----~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL 281 (468)
.-++++.+.+-+.+..+.. .....+.+...++..++.|++.|++|||+ +||||.||-..|++|+..- ++||
T Consensus 362 --~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~-~~ViHkDiAaRNCvIdd~L-qVkl 437 (563)
T KOG1024|consen 362 --TPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHN-HGVIHKDIAARNCVIDDQL-QVKL 437 (563)
T ss_pred --cceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHh-cCcccchhhhhcceehhhe-eEEe
Confidence 3557788888554443333 22234556777788899999999999998 9999999999999999775 8999
Q ss_pred eeecCccccCCCCCCcc---ccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhC
Q 012233 282 CDFGSAKMLVPGEPNIS---YICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILG 357 (468)
Q Consensus 282 ~DFG~a~~~~~~~~~~~---~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~ 357 (468)
+|-.+++.+.+...+.- .-....||+||.+... .|+.++|+|||||+||||+| |+.||...++.+...-+....+
T Consensus 438 tDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~-~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylkdGyR 516 (563)
T KOG1024|consen 438 TDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNS-HYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLKDGYR 516 (563)
T ss_pred ccchhccccCcccccccCCCCCCcccccCHHHHhhh-hhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHhccce
Confidence 99999988766554321 1225679999999755 49999999999999999997 9999988877766555444211
Q ss_pred CCCHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 358 TPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
. ..+-++|+++..++..||..+|++||+.+|+..
T Consensus 517 l----------------------------aQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~ 550 (563)
T KOG1024|consen 517 L----------------------------AQPFNCPDELFTVMACCWALLPEERPSFSQLVI 550 (563)
T ss_pred e----------------------------cCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHH
Confidence 0 122368999999999999999999999999753
No 404
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.96 E-value=2.9e-28 Score=226.38 Aligned_cols=203 Identities=33% Similarity=0.573 Sum_probs=165.5
Q ss_pred eEEeceecccCceEEEEEEEcCCCCEEEEEEeecc-----cchHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEEE
Q 012233 139 YMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD-----KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLV 213 (468)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~-----~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv 213 (468)
|.+.+.||.|++|.||++....+++.+|+|.+... .....+|+..++.++|+|++++++++.. ....+++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~-----~~~~~~v 75 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFED-----PEPLYLV 75 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeec-----CCceEEE
Confidence 56778999999999999999888999999998653 3455679999999999999999998733 3458899
Q ss_pred eecccch-HHHHHhhhhhcCCC-CCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccC
Q 012233 214 LEYISET-VYRVSKHYTRMNQH-VPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (468)
Q Consensus 214 ~e~~~~~-ll~~~~~~~~~~~~-~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~ 291 (468)
+||+.++ +...+.. ... +++..+..++.|++.+|.|||+ .|++|+||+|.||+++.++ .++|+|||.+....
T Consensus 76 ~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~~~l~~~l~~lh~-~~i~h~di~~~ni~v~~~~-~~~l~d~g~~~~~~ 149 (225)
T smart00221 76 MEYCEGGDLFDYLRK----KGGKLSEEEARFYLRQILEALEYLHS-LGIVHRDLKPENILLGMDG-LVKLADFGLARFIH 149 (225)
T ss_pred EeccCCCCHHHHHHh----cccCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEEcCCC-CEEEeeCceeeEec
Confidence 9999984 4443332 222 7888999999999999999998 8999999999999999887 79999999998765
Q ss_pred CCC--CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCC-CCcHHHHHHH
Q 012233 292 PGE--PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPG-ESGVDQLVEI 352 (468)
Q Consensus 292 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~-~~~~~~~~~i 352 (468)
... ......++..|++||.+.+...++.++|+|+||+++|+|++|+.||.. .+....+.+.
T Consensus 150 ~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~~~~~~~~~~~~ 213 (225)
T smart00221 150 RDLAALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSGEGEFTSLLSDV 213 (225)
T ss_pred CcccccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccccchhHHHHHHH
Confidence 443 334567788999999984334477899999999999999999999977 5555444443
No 405
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.95 E-value=1.9e-27 Score=213.29 Aligned_cols=156 Identities=24% Similarity=0.243 Sum_probs=119.4
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCCCCCCccccccCCccccccc
Q 012233 232 NQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGEPNISYICSRYYRAPELI 311 (468)
Q Consensus 232 ~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~ 311 (468)
...+++..++.++.||+.||.|||+ .+ ||+|||++.++ .+|+ ||++...... ...||+.|+|||++
T Consensus 11 ~~~l~~~~~~~i~~qi~~~L~~lH~-~~------kp~Nil~~~~~-~~~~--fG~~~~~~~~----~~~g~~~y~aPE~~ 76 (176)
T smart00750 11 GRPLNEEEIWAVCLQCLRALRELHR-QA------KSGNILLTWDG-LLKL--DGSVAFKTPE----QSRVDPYFMAPEVI 76 (176)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHh-cC------CcccEeEcCcc-ceee--ccceEeeccc----cCCCcccccChHHh
Confidence 4569999999999999999999998 67 99999999887 6888 9998765332 23689999999999
Q ss_pred cCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHH-HHHHHHHhCCCCHHHHhhcCCCCccCCCCcccCCCccccccc
Q 012233 312 FGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQ-LVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHK 390 (468)
Q Consensus 312 ~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (468)
.+.. ++.++|||||||++|||++|+.||........ +..+........ +. ......
T Consensus 77 ~~~~-~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~----------------~~------~~~~~~ 133 (176)
T smart00750 77 QGQS-YTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADD----------------PR------DRSNLE 133 (176)
T ss_pred cCCC-CcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCC----------------cc------ccccHH
Confidence 7654 89999999999999999999999976544332 222222111000 00 000011
Q ss_pred CCCH--HHHHHHHHhcccCCCCCCCHHHHhCCCCCC
Q 012233 391 RMPP--EALDLVSRLLQYSPSLRCTALEACAHPFFD 424 (468)
Q Consensus 391 ~~~~--~l~~li~~~L~~dP~~R~s~~ell~hp~f~ 424 (468)
.++. +++++|.+||..||.+||++.+++.|+|+.
T Consensus 134 ~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~ 169 (176)
T smart00750 134 SVSAARSFADFMRVCASRLPQRREAANHYLAHCRAL 169 (176)
T ss_pred HHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHH
Confidence 2333 699999999999999999999999999975
No 406
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.95 E-value=3.4e-28 Score=254.68 Aligned_cols=259 Identities=25% Similarity=0.350 Sum_probs=192.2
Q ss_pred e-EEeceecccCceEEEEEEEcCCCCEEEEEEee----cccch------HHHHHHHHHHcCCCCcccccceeeecCCCCc
Q 012233 139 Y-MAERVVGTGSFGVVFQAKCLETGDSVAIKKVL----QDKRY------KNRELQIMRLLNHPNVVSLKHCFFSTTEKDE 207 (468)
Q Consensus 139 y-~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~----~~~~~------~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 207 (468)
| ....++|.|++|.|+.+......+.++.|.+. ..... ...|+.+-..+.|+|++..+..++....
T Consensus 319 y~~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~--- 395 (601)
T KOG0590|consen 319 YGKPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDG--- 395 (601)
T ss_pred cCCccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhccc---
Confidence 5 56678999999999888887777777776543 11111 1235566677889999887776643322
Q ss_pred eEEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCc
Q 012233 208 LYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSA 287 (468)
Q Consensus 208 ~~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a 287 (468)
.+-+||||+++++.++.. ...+....+..++.|++.||.|||. .||.|||||++|++++.++ .+||+|||.+
T Consensus 396 --~~~~mE~~~~Dlf~~~~~----~~~~~~~e~~c~fKqL~~Gv~y~h~-~GiahrdlK~enll~~~~g-~lki~Dfg~~ 467 (601)
T KOG0590|consen 396 --ILQSMEYCPYDLFSLVMS----NGKLTPLEADCFFKQLLRGVKYLHS-MGLAHRDLKLENLLVTENG-ILKIIDFGAA 467 (601)
T ss_pred --chhhhhcccHHHHHHHhc----ccccchhhhhHHHHHHHHHHHHHHh-cCceeccCccccEEEecCC-ceEEeecCcc
Confidence 233499999966665543 2457778899999999999999998 8999999999999999998 8999999998
Q ss_pred cccCCC-----CCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHH
Q 012233 288 KMLVPG-----EPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTRE 362 (468)
Q Consensus 288 ~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~ 362 (468)
....-. ......+|+..|+|||++.+........||||.|++++.|++|+.||......+....-..
T Consensus 468 ~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~-------- 539 (601)
T KOG0590|consen 468 SVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNN-------- 539 (601)
T ss_pred eeeccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhc--------
Confidence 765322 2345678999999999998777555689999999999999999999976554433210000
Q ss_pred HHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCCC
Q 012233 363 EIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRD 428 (468)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~~ 428 (468)
....+.. ... ...+...++.+.+.+|.+||++||.+|+|+++|++.+||+.+..
T Consensus 540 -------~~~~~~~---~~~--~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i~~ 593 (601)
T KOG0590|consen 540 -------YSDQRNI---FEG--PNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRSIEC 593 (601)
T ss_pred -------ccccccc---ccC--hHHHHHhchhhHHHHHHHHccCChhheecHHHHhhChHhhhcce
Confidence 0000000 000 11133557889999999999999999999999999999998754
No 407
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.94 E-value=2.8e-25 Score=218.81 Aligned_cols=250 Identities=20% Similarity=0.204 Sum_probs=189.2
Q ss_pred ceEEeceecccCceEEEEEEEcCCC-CEEEEEEeeccc----chHHHHHHHHHHcCC----CCcccccceeeecCCCCce
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETG-DSVAIKKVLQDK----RYKNRELQIMRLLNH----PNVVSLKHCFFSTTEKDEL 208 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g-~~vaiK~~~~~~----~~~~~E~~il~~l~h----pnIv~l~~~~~~~~~~~~~ 208 (468)
+|.+.+.||+|+||.||.|.+..++ ..+|+|...... ..+..|..++..+.. .++..+++.+. ....
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~----~~~~ 94 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGR----STED 94 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEecc----CCCc
Confidence 6999999999999999999987764 678898775432 146679999999973 57777776652 2455
Q ss_pred EEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCC----CcEEEeee
Q 012233 209 YLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHT----HQLKICDF 284 (468)
Q Consensus 209 ~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~----~~vkL~DF 284 (468)
+-||||+.++.++.++..... .+.++...+..++.|++.+|.+||+ .|++||||||+|+++.... ..+.|.||
T Consensus 95 ~~~iVM~l~G~sL~dl~~~~~--~~~fs~~T~l~ia~q~l~~l~~lH~-~G~iHRDiKp~N~~~g~~~~~~~~~~~llDf 171 (322)
T KOG1164|consen 95 FNFIVMSLLGPSLEDLRKRNP--PGRFSRKTVLRIAIQNLNALEDLHS-KGFIHRDIKPENFVVGQSSRSEVRTLYLLDF 171 (322)
T ss_pred eeEEEEeccCccHHHHHHhCC--CCCcCHhHHHHHHHHHHHHHHHHHh-cCcccCCcCHHHeeecCCCCcccceEEEEec
Confidence 688999999999888665443 6789999999999999999999998 8999999999999997553 47999999
Q ss_pred cCcc--ccCCCC--------C-CccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHH
Q 012233 285 GSAK--MLVPGE--------P-NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEII 353 (468)
Q Consensus 285 G~a~--~~~~~~--------~-~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~ 353 (468)
|+++ ...... . ...+.||..|+++.+..+.. .+.+.|+||++.++.+|+.|..||.+........+..
T Consensus 172 Glar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e-~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~ 250 (322)
T KOG1164|consen 172 GLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIE-QGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFE 250 (322)
T ss_pred CCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCc-cCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHH
Confidence 9998 321111 1 23456999999999987655 8999999999999999999999998766444433333
Q ss_pred HHhCCCCHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 354 KILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
+...... ... +....+.++.++...+-..+...+|....+..
T Consensus 251 ~~~~~~~---------------~~~---------~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~ 292 (322)
T KOG1164|consen 251 KDPRKLL---------------TDR---------FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAE 292 (322)
T ss_pred HHhhhhc---------------ccc---------ccCCChHHHHHHHHHhhccCCcCCCCHHHHHH
Confidence 2110000 000 11224567777777777788888998776654
No 408
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.93 E-value=2.3e-25 Score=198.34 Aligned_cols=209 Identities=23% Similarity=0.318 Sum_probs=167.5
Q ss_pred cceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc--chHHHHHHHHHHcCC-CCcccccceeeecCCCCceEEEEE
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK--RYKNRELQIMRLLNH-PNVVSLKHCFFSTTEKDELYLNLV 213 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~--~~~~~E~~il~~l~h-pnIv~l~~~~~~~~~~~~~~~~lv 213 (468)
.+|++++.||+|+||.+|+|....+|+.||||.-.... ..+..|..+.+.|++ ..|..+..++ ....+-.+|
T Consensus 15 gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~hpqL~yEskvY~iL~~g~GiP~i~~y~-----~e~~ynvlV 89 (341)
T KOG1163|consen 15 GKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKHPQLLYESKVYRILQGGVGIPHIRHYG-----TEKDYNVLV 89 (341)
T ss_pred cceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCCcchhHHHHHHHHhccCCCCchhhhhc-----cccccceee
Confidence 35999999999999999999999999999999765443 345579999999985 4555555544 445567799
Q ss_pred eecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCC--CCcEEEeeecCccccC
Q 012233 214 LEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPH--THQLKICDFGSAKMLV 291 (468)
Q Consensus 214 ~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~--~~~vkL~DFG~a~~~~ 291 (468)
||.++.++-+++. -+.+.|+...+..++-|++.-++|+|. +++|||||||+|+|..-+ .+.+.|+|||+|+.+.
T Consensus 90 MdLLGPsLEdLfn---fC~R~ftmkTvLMLaDQml~RiEyvH~-r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~ 165 (341)
T KOG1163|consen 90 MDLLGPSLEDLFN---FCSRRFTMKTVLMLADQMLSRIEYVHL-RNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYR 165 (341)
T ss_pred eeccCccHHHHHH---HHhhhhhHHhHHHHHHHHHHHHHHHHh-hccccccCCccceeeccccccceEEEEeccchhhhc
Confidence 9999998877654 346779999999999999999999997 999999999999998543 3479999999998774
Q ss_pred CCC--------CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcH---HHHHHHHHH
Q 012233 292 PGE--------PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGV---DQLVEIIKI 355 (468)
Q Consensus 292 ~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~---~~~~~i~~~ 355 (468)
+.. ......||.+|.+-....+.. .+.+.|+-|+|.+|..+..|..||++.... +.+.+|.+.
T Consensus 166 d~~t~~HIpyre~r~ltGTaRYASinAh~g~e-qSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~Ek 239 (341)
T KOG1163|consen 166 DIRTRQHIPYREDRNLTGTARYASINAHLGIE-QSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEK 239 (341)
T ss_pred cccccccCccccCCccceeeeehhhhhhhhhh-hhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHh
Confidence 332 234578999999988776554 788999999999999999999999986543 334455443
No 409
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.93 E-value=4.8e-26 Score=238.50 Aligned_cols=245 Identities=27% Similarity=0.473 Sum_probs=180.1
Q ss_pred cccceEEeceecccCceEEEEEEEcCCCCEEEEEEeecccchHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEEEe
Q 012233 135 QTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVL 214 (468)
Q Consensus 135 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv~ 214 (468)
...+|..++.|-.|+||.||+++++.+.+.+|+| +.++....++ |+.....|.+ |
T Consensus 81 ~e~df~~IklisngAygavylvrh~~trqrfa~k-iNkq~lilRn---ilt~a~npfv--------------------v- 135 (1205)
T KOG0606|consen 81 SESDFNTIKLISNGAYGAVYLVRHKETRQRFAMK-INKQNLILRN---ILTFAGNPFV--------------------V- 135 (1205)
T ss_pred CccccceeEeeccCCCCceeeeeccccccchhhc-ccccchhhhc---cccccCCcce--------------------e-
Confidence 3446999999999999999999999999999994 4443333222 2222222222 2
Q ss_pred ecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCCCC
Q 012233 215 EYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGE 294 (468)
Q Consensus 215 e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~~~ 294 (468)
|+...+++. -+.++. +++.+++|||+ .||+|||+||+|.||+.-| .+|++|||+++......
T Consensus 136 ----gDc~tllk~----~g~lPv--------dmvla~Eylh~-ygivhrdlkpdnllIT~mG-hiKlTDfgLsk~GLms~ 197 (1205)
T KOG0606|consen 136 ----GDCATLLKN----IGPLPV--------DMVLAVEYLHS-YGIVHRDLKPDNLLITSMG-HIKLTDFGLSKKGLMSL 197 (1205)
T ss_pred ----chhhhhccc----CCCCcc--------hhhHHhHhhcc-CCeecCCCCCCcceeeecc-cccccchhhhhhhhhhc
Confidence 322222221 223332 33788999998 8999999999999999988 59999999986542111
Q ss_pred ----------------CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCC
Q 012233 295 ----------------PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGT 358 (468)
Q Consensus 295 ----------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~ 358 (468)
.....+|||.|.|||++.... |+..+|+|++|+|+||.+.|..||.++++++.+...+..
T Consensus 198 atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqg-ygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd--- 273 (1205)
T KOG0606|consen 198 ATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQG-YGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISD--- 273 (1205)
T ss_pred cchhhhcchHHHHHHhhhccccCCccccChhhhhhhc-cCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhh---
Confidence 112468999999999997654 999999999999999999999999999999988887762
Q ss_pred CCHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCC---CHHHHhCCCCCCCCCCCCCCCCC
Q 012233 359 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRC---TALEACAHPFFDDLRDPNTCLPN 435 (468)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~---s~~ell~hp~f~~~~~~~~~~~~ 435 (468)
++.+|. . ...++++++++|.++|+.+|..|. .+.++.+|+||+.+.....---+
T Consensus 274 --------------~i~wpE--------~-dea~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~ff~~LDw~~llRqk 330 (1205)
T KOG0606|consen 274 --------------DIEWPE--------E-DEALPPEAQDLIEQLLRQNPLCRLGTGGALEVKQHGFFQLLDWKSLLRQK 330 (1205)
T ss_pred --------------hccccc--------c-CcCCCHHHHHHHHHHHHhChHhhcccchhhhhhhccceeecccchhhhhh
Confidence 223322 1 245789999999999999999996 57789999999998776443333
Q ss_pred CCCCCcccccCHHH
Q 012233 436 GRPLPTLFNFTAQE 449 (468)
Q Consensus 436 ~~~~~~~~~~~~~~ 449 (468)
..-+|.+.++++-.
T Consensus 331 aefvpql~~eddts 344 (1205)
T KOG0606|consen 331 AEFVPQLESEDDTS 344 (1205)
T ss_pred ccccccccccccch
Confidence 44466666666433
No 410
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.93 E-value=1.8e-24 Score=200.82 Aligned_cols=214 Identities=22% Similarity=0.310 Sum_probs=174.2
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEee--cccchHHHHHHHHHHcC-CCCcccccceeeecCCCCceEEEEEe
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVL--QDKRYKNRELQIMRLLN-HPNVVSLKHCFFSTTEKDELYLNLVL 214 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~--~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~~~~~~lv~ 214 (468)
.|++++.||+|+||.++.|.+.-+++.||||.-. .+...+..|....+.|. .+.|..+|-+. ....+-.|||
T Consensus 29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~APQLrdEYr~YKlL~g~~GIP~vYYFG-----qeG~~NiLVi 103 (449)
T KOG1165|consen 29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSEAPQLRDEYRTYKLLGGTEGIPQVYYFG-----QEGKYNILVI 103 (449)
T ss_pred cceeccccccCcceeeecccccccCceEEEEeccccCCcchHHHHHHHHHHHcCCCCCCceeeec-----cccchhhhhh
Confidence 5999999999999999999999999999999653 33455677999998886 67888775443 4445566999
Q ss_pred ecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecC----CCCcEEEeeecCcccc
Q 012233 215 EYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNP----HTHQLKICDFGSAKML 290 (468)
Q Consensus 215 e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~----~~~~vkL~DFG~a~~~ 290 (468)
|+++.+|-+++ ..+.+.|+...+..++.|++.-++|+|+ +.+|+|||||+|+||.. +.+.|.|+|||+|+.+
T Consensus 104 dLLGPSLEDLF---D~CgR~FSvKTV~miA~Qmi~rie~vH~-k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~Y 179 (449)
T KOG1165|consen 104 DLLGPSLEDLF---DLCGRRFSVKTVAMIAKQMITRIEYVHE-KDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEY 179 (449)
T ss_pred hhhCcCHHHHH---HHhcCcccHHhHHHHHHHHHHHHHHHHh-cceeecccCccceeecCCCCCCCceEEEEeccchhhh
Confidence 99999887754 4467889999999999999999999998 99999999999999953 3346999999999877
Q ss_pred CCC--------CCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCC---CcHHHHHHHHHHhCCC
Q 012233 291 VPG--------EPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGE---SGVDQLVEIIKILGTP 359 (468)
Q Consensus 291 ~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~---~~~~~~~~i~~~~~~~ 359 (468)
.+. ....+..||.+||+-....|.. .+.+.|+-|||-+++..|.|..||.+. +..+.+.+|-......
T Consensus 180 rDp~TkqHIPYrE~KSLsGTARYMSINTHlGrE-QSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe~Kr~T 258 (449)
T KOG1165|consen 180 RDPKTKQHIPYREHKSLSGTARYMSINTHLGRE-QSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGETKRST 258 (449)
T ss_pred cCccccccCccccccccccceeeeEeeccccch-hhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhccccccC
Confidence 433 2345678999999999888765 799999999999999999999999884 4555566665544433
Q ss_pred CH
Q 012233 360 TR 361 (468)
Q Consensus 360 ~~ 361 (468)
+.
T Consensus 259 ~i 260 (449)
T KOG1165|consen 259 PI 260 (449)
T ss_pred CH
Confidence 33
No 411
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.93 E-value=2e-25 Score=219.97 Aligned_cols=157 Identities=19% Similarity=0.282 Sum_probs=121.0
Q ss_pred ccceEEeceecccCceEEEEEEEcC-CCCEEEEEEeecc---------cchHHHHHHHHHHcCCCCcccccceeeecCCC
Q 012233 136 TISYMAERVVGTGSFGVVFQAKCLE-TGDSVAIKKVLQD---------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEK 205 (468)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~~~-~g~~vaiK~~~~~---------~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 205 (468)
...|.+.+.||+|+||+||+|.+.. +++.||||++... ...+.+|+++|+.++|+||+..+..+ .
T Consensus 17 ~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~---~-- 91 (365)
T PRK09188 17 SARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT---G-- 91 (365)
T ss_pred cCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc---C--
Confidence 4469999999999999999999876 6778899986422 22357899999999999998533211 1
Q ss_pred CceEEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCC-CCCCeeecCCCCcEEEeee
Q 012233 206 DELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDI-KPQNLLVNPHTHQLKICDF 284 (468)
Q Consensus 206 ~~~~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDl-kp~NILl~~~~~~vkL~DF 284 (468)
..||||||+.|+.+.... . .. ...++.|++.+|.|||+ +||+|||| ||+|||++.++ .+||+||
T Consensus 92 ---~~~LVmE~~~G~~L~~~~---~----~~---~~~~~~~i~~aL~~lH~-~gIiHrDL~KP~NILv~~~~-~ikLiDF 156 (365)
T PRK09188 92 ---KDGLVRGWTEGVPLHLAR---P----HG---DPAWFRSAHRALRDLHR-AGITHNDLAKPQNWLMGPDG-EAAVIDF 156 (365)
T ss_pred ---CcEEEEEccCCCCHHHhC---c----cc---hHHHHHHHHHHHHHHHH-CCCeeCCCCCcceEEEcCCC-CEEEEEC
Confidence 268999999987664221 0 11 14578899999999998 89999999 99999998777 7999999
Q ss_pred cCccccCCCCC---------CccccccCCcccccccc
Q 012233 285 GSAKMLVPGEP---------NISYICSRYYRAPELIF 312 (468)
Q Consensus 285 G~a~~~~~~~~---------~~~~~gt~~y~aPE~~~ 312 (468)
|+|+.+..... .....+++.|+|||.+.
T Consensus 157 GlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~ 193 (365)
T PRK09188 157 QLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALT 193 (365)
T ss_pred ccceecccCcchhhhhhhhhhhhhhccCccCCcccCC
Confidence 99986643221 12456788899999884
No 412
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.92 E-value=9.7e-24 Score=205.62 Aligned_cols=264 Identities=33% Similarity=0.468 Sum_probs=197.9
Q ss_pred eEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc-------chHHHHHHHHHHcCCC-CcccccceeeecCCCCceEE
Q 012233 139 YMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHP-NVVSLKHCFFSTTEKDELYL 210 (468)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-------~~~~~E~~il~~l~hp-nIv~l~~~~~~~~~~~~~~~ 210 (468)
|.+...||.|+||.||.+.+. ..+++|.+.... ....+|+.++..+.|+ +|+++++++ ......
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~-----~~~~~~ 73 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFF-----QDEGSL 73 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEE-----ecCCEE
Confidence 778899999999999999985 788999885432 2345788999999988 799999988 233337
Q ss_pred EEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCcccc
Q 012233 211 NLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (468)
Q Consensus 211 ~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~ 290 (468)
+++++++.++.+............+.......++.|++.++.|+|. .|++|||+||+||+++..+..++++|||.+...
T Consensus 74 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~-~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~ 152 (384)
T COG0515 74 YLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHS-KGIIHRDIKPENILLDRDGRVVKLIDFGLAKLL 152 (384)
T ss_pred EEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHh-CCeeccCCCHHHeeecCCCCeEEEeccCcceec
Confidence 8999999987665221111000268889999999999999999998 899999999999999987635999999999755
Q ss_pred CCCC-------CCccccccCCccccccccCC--CCCCcchhHHHHHHHHHHHHhCCCCCCCCCc---HHHHHHHHHHhCC
Q 012233 291 VPGE-------PNISYICSRYYRAPELIFGA--TEYTTAIDMWSIGCVLAELLLGQPLFPGESG---VDQLVEIIKILGT 358 (468)
Q Consensus 291 ~~~~-------~~~~~~gt~~y~aPE~~~~~--~~~~~~~DvwSlG~il~ell~G~~pf~~~~~---~~~~~~i~~~~~~ 358 (468)
.... ......|+..|++||.+.+. ..+....|+||+|++++++++|..||..... .......+.....
T Consensus 153 ~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 232 (384)
T COG0515 153 PDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPT 232 (384)
T ss_pred CCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCC
Confidence 4333 23567899999999999763 4588999999999999999999999887764 4444444443222
Q ss_pred CCHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCCCCC
Q 012233 359 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPN 430 (468)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~~~~ 430 (468)
+ ....+.. ..........+.+++.+|+..+|..|.+..+...++|........
T Consensus 233 ~-------------~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~ 285 (384)
T COG0515 233 P-------------SLASPLS------PSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHLKLKE 285 (384)
T ss_pred c-------------ccccccC------ccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhchHhhCccccc
Confidence 2 0000000 000011235789999999999999999999999987776644433
No 413
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.91 E-value=1.3e-25 Score=225.11 Aligned_cols=237 Identities=30% Similarity=0.446 Sum_probs=187.9
Q ss_pred eecccCceEEEEEEE---cCCCCEEEEEEeecc------cchHHHHHHHHHHcC-CCCcccccceeeecCCCCceEEEEE
Q 012233 144 VVGTGSFGVVFQAKC---LETGDSVAIKKVLQD------KRYKNRELQIMRLLN-HPNVVSLKHCFFSTTEKDELYLNLV 213 (468)
Q Consensus 144 ~lG~G~fg~Vy~~~~---~~~g~~vaiK~~~~~------~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~~~~~~lv 213 (468)
++|+|.||.|+++.- ...|..+|+|+..+. ......|..++..++ ||.+|++.-+|.+ +..++++
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt-----~~kl~l~ 75 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQT-----DGKLYLI 75 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeecc-----ccchhHh
Confidence 379999999988753 345777888876432 112335888888887 9999999888843 3448899
Q ss_pred eecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCCC
Q 012233 214 LEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPG 293 (468)
Q Consensus 214 ~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~~ 293 (468)
++|..++.+- .+ ......+.+...+.+...++-+++++|+ .||+|||+|++||+++.+|+ +++.|||+++.....
T Consensus 76 ld~~rgg~lf--t~-l~~~~~f~~~~~~~~~aelaLald~lh~-l~iiyrd~k~enilld~~Gh-i~~tdfglske~v~~ 150 (612)
T KOG0603|consen 76 LDFLRGGDLF--TR-LSKEVMFDELDVAFYLAELALALDHLHK-LGIAYRDYKLENVLLLLEGH-IKLTDFGLSKEAVKE 150 (612)
T ss_pred hhhcccchhh--hc-cccCCchHHHHHHHHHHHHHHHHhhcch-hHHHHhcccccceeecccCc-cccCCchhhhHhHhh
Confidence 9999876332 22 2234567788889999999999999998 89999999999999999994 999999999877554
Q ss_pred CCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCCcc
Q 012233 294 EPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTE 373 (468)
Q Consensus 294 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 373 (468)
... |||..|||||++. ....++|+||||+++|||++|..||.. +....|... .
T Consensus 151 ~~~---cgt~eymApEI~~---gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il~~-----------------~ 203 (612)
T KOG0603|consen 151 KIA---CGTYEYRAPEIIN---GHLSAADWWSFGVLAFELLTGTLPFGG----DTMKRILKA-----------------E 203 (612)
T ss_pred hhc---ccchhhhhhHhhh---ccCCcccchhhhhhHHHHhhCCCCCch----HHHHHHhhh-----------------c
Confidence 433 9999999999996 368899999999999999999999987 555555441 1
Q ss_pred CCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCC-----HHHHhCCCCCCCCCCC
Q 012233 374 FKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCT-----ALEACAHPFFDDLRDP 429 (468)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s-----~~ell~hp~f~~~~~~ 429 (468)
.. ++..++.++.+++..++..+|..|.- +.++++|+||+.+...
T Consensus 204 ~~------------~p~~l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h~f~~~i~~~ 252 (612)
T KOG0603|consen 204 LE------------MPRELSAEARSLFRQLFKRNPENRLGAGPDGVDEIKQHEFFQSIDWN 252 (612)
T ss_pred cC------------CchhhhHHHHHHHHHHHhhCHHHHhccCcchhHHHhccchheeeeHh
Confidence 11 33457889999999999999999984 5799999999987553
No 414
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.90 E-value=1.6e-23 Score=198.59 Aligned_cols=195 Identities=25% Similarity=0.357 Sum_probs=144.3
Q ss_pred CCCCcccccceeeecCC----------------------CCceEEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHH
Q 012233 188 NHPNVVSLKHCFFSTTE----------------------KDELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTY 245 (468)
Q Consensus 188 ~hpnIv~l~~~~~~~~~----------------------~~~~~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~ 245 (468)
.|||||++..+|.+... .....+|+||.....++..++. .+..+....+.++.
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~tLr~yl~-----~~~~s~r~~~~~la 348 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQTLREYLW-----TRHRSYRTGRVILA 348 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchhhHHHHHh-----cCCCchHHHHHHHH
Confidence 49999999988744321 1134588999999888776554 35567778888999
Q ss_pred HHHHHHHHhHhcCCccccCCCCCCeeecCCCC---cEEEeeecCccccCC-------CCCCccccccCCccccccccCCC
Q 012233 246 QICRALNYLHHVVGVCHRDIKPQNLLVNPHTH---QLKICDFGSAKMLVP-------GEPNISYICSRYYRAPELIFGAT 315 (468)
Q Consensus 246 qi~~aL~yLH~~~givHrDlkp~NILl~~~~~---~vkL~DFG~a~~~~~-------~~~~~~~~gt~~y~aPE~~~~~~ 315 (468)
|+++|+.|||+ +||.|||||.+||||.-+.+ .+.|+|||++-.-.. ........|...-||||+....+
T Consensus 349 QlLEav~hL~~-hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~P 427 (598)
T KOG4158|consen 349 QLLEAVTHLHK-HGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVP 427 (598)
T ss_pred HHHHHHHHHHH-ccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCC
Confidence 99999999998 99999999999999843322 588999999743211 11223456788899999986543
Q ss_pred C-----CCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCCccCCCCcccCCCccccccc
Q 012233 316 E-----YTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHK 390 (468)
Q Consensus 316 ~-----~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (468)
. .-.++|.|+.|.+.||++....||.+....-. -..+|.+-++|. ++.
T Consensus 428 Gp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L------------------~~r~Yqe~qLPa---------lp~ 480 (598)
T KOG4158|consen 428 GPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLL------------------DTRTYQESQLPA---------LPS 480 (598)
T ss_pred CCceeeccchhhhhhhhhhHHHHhccCCcccccchhee------------------chhhhhhhhCCC---------Ccc
Confidence 3 23478999999999999999999987321100 011234444443 567
Q ss_pred CCCHHHHHHHHHhcccCCCCCCCHH
Q 012233 391 RMPPEALDLVSRLLQYSPSLRCTAL 415 (468)
Q Consensus 391 ~~~~~l~~li~~~L~~dP~~R~s~~ 415 (468)
.+++.+++|+..+|+.||++|+++.
T Consensus 481 ~vpp~~rqlV~~lL~r~pskRvsp~ 505 (598)
T KOG4158|consen 481 RVPPVARQLVFDLLKRDPSKRVSPN 505 (598)
T ss_pred cCChHHHHHHHHHhcCCccccCCcc
Confidence 7999999999999999999999854
No 415
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.89 E-value=5.5e-23 Score=194.51 Aligned_cols=237 Identities=24% Similarity=0.316 Sum_probs=144.5
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeecccchHH-------HHHHHHHHcC----------CCCcccccceee
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRYKN-------RELQIMRLLN----------HPNVVSLKHCFF 200 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~~~~~-------~E~~il~~l~----------hpnIv~l~~~~~ 200 (468)
.+..++.||.|+|+.||.+.+..+|+.+|+|++........ +|.-....+. |-.++..++...
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 36788899999999999999999999999998854332221 2221111111 111222222211
Q ss_pred --------ecCCCCce----EEEEEeecccchHHHHHhhhhhcCCC---CCHHHHHHHHHHHHHHHHHhHhcCCccccCC
Q 012233 201 --------STTEKDEL----YLNLVLEYISETVYRVSKHYTRMNQH---VPILYVQLYTYQICRALNYLHHVVGVCHRDI 265 (468)
Q Consensus 201 --------~~~~~~~~----~~~lv~e~~~~~ll~~~~~~~~~~~~---~~~~~~~~~~~qi~~aL~yLH~~~givHrDl 265 (468)
........ ..+++|+-+.+++..++......... ........+..|+++.+++||. .|++|+||
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~-~GlVHgdi 171 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRAQGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHS-YGLVHGDI 171 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE--SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHH-TTEEEST-
T ss_pred EcCCCcceecCCCCccceeehhhhccchhhhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhh-cceEeccc
Confidence 11111111 24678888888887765543332222 2222234456899999999998 99999999
Q ss_pred CCCCeeecCCCCcEEEeeecCccccCCCCCCccccccCCccccccccCC-------CCCCcchhHHHHHHHHHHHHhCCC
Q 012233 266 KPQNLLVNPHTHQLKICDFGSAKMLVPGEPNISYICSRYYRAPELIFGA-------TEYTTAIDMWSIGCVLAELLLGQP 338 (468)
Q Consensus 266 kp~NILl~~~~~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-------~~~~~~~DvwSlG~il~ell~G~~ 338 (468)
||+|+|++.+| .++|+||+....... .......+..|.+||..... ..++.+.|.|+||+++|.|.+|..
T Consensus 172 ~~~nfll~~~G-~v~Lg~F~~~~r~g~--~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~l 248 (288)
T PF14531_consen 172 KPENFLLDQDG-GVFLGDFSSLVRAGT--RYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRL 248 (288)
T ss_dssp SGGGEEE-TTS--EEE--GGGEEETTE--EEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-
T ss_pred ceeeEEEcCCC-CEEEcChHHHeecCc--eeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccC
Confidence 99999999998 799999998765422 11113456789999977332 237889999999999999999999
Q ss_pred CCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCC
Q 012233 339 LFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLR 411 (468)
Q Consensus 339 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R 411 (468)
||........ .+. .|.. .. ++|+.+++||..+|++||.+|
T Consensus 249 Pf~~~~~~~~-----------------------~~~--------~f~~-C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 249 PFGLSSPEAD-----------------------PEW--------DFSR-CR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp STCCCGGGST-----------------------SGG--------GGTT-SS----HHHHHHHHHHT-SSGGGS
T ss_pred CCCCCCcccc-----------------------ccc--------cchh-cC-CcCHHHHHHHHHHccCCcccC
Confidence 9975432110 000 1111 22 689999999999999999987
No 416
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.88 E-value=4.1e-23 Score=216.85 Aligned_cols=241 Identities=27% Similarity=0.411 Sum_probs=169.9
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeecccc-----h---HHHHHHHHHHcCCCCcccccceeeecCCCCceE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKR-----Y---KNRELQIMRLLNHPNVVSLKHCFFSTTEKDELY 209 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~~-----~---~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~ 209 (468)
.|...+.||++.|=+|.+|++. .| .|+||++.+... . .-+|++ ...+++||++.+..+. .....
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~-eG-~vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~-----~t~kA 95 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDR-EG-LVVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVL-----VTDKA 95 (1431)
T ss_pred ceeeecccCchhhhhhhhccCC-Cc-eEEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHH-----HhhHH
Confidence 4888899999999999999873 34 488999855431 1 123444 6677899999987765 44445
Q ss_pred EEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccc
Q 012233 210 LNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (468)
Q Consensus 210 ~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~ 289 (468)
.|||-+|+...|++.+.. ..-+...+.+.|+.||+.||.-+|+ .||+|||||.|||||++-.+ +.|+||..-+.
T Consensus 96 AylvRqyvkhnLyDRlST----RPFL~~iEKkWiaFQLL~al~qcH~-~gVcHGDIKsENILiTSWNW-~~LtDFAsFKP 169 (1431)
T KOG1240|consen 96 AYLVRQYVKHNLYDRLST----RPFLVLIEKKWIAFQLLKALSQCHK-LGVCHGDIKSENILITSWNW-LYLTDFASFKP 169 (1431)
T ss_pred HHHHHHHHhhhhhhhhcc----chHHHHHHHHHHHHHHHHHHHHHHH-cCccccccccceEEEeeech-hhhhcccccCC
Confidence 789999999988875542 2334566778899999999999998 89999999999999998774 89999987643
Q ss_pred c--CCCCC-Ccc-----ccccCCccccccccCCC----------CCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHHH
Q 012233 290 L--VPGEP-NIS-----YICSRYYRAPELIFGAT----------EYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLV 350 (468)
Q Consensus 290 ~--~~~~~-~~~-----~~gt~~y~aPE~~~~~~----------~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~~ 350 (468)
. +.+.+ ..+ ...-.+|.|||.+.... ..+++-||||+||+++||++ |++||.- .++.
T Consensus 170 tYLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~L----SQL~ 245 (1431)
T KOG1240|consen 170 TYLPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTL----SQLL 245 (1431)
T ss_pred ccCCCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccH----HHHH
Confidence 3 22211 111 11235799999985421 15678999999999999987 7999842 1111
Q ss_pred HHHHHhCCCCHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCC
Q 012233 351 EIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAH 420 (468)
Q Consensus 351 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~h 420 (468)
.....- ....+. .+.+--+..++.||..|++.||++|.+|++.|+-
T Consensus 246 aYr~~~-~~~~e~-----------------------~Le~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 246 AYRSGN-ADDPEQ-----------------------LLEKIEDVSLRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred hHhccC-ccCHHH-----------------------HHHhCcCccHHHHHHHHHccCchhccCHHHHHHh
Confidence 111100 000000 0111123468999999999999999999999874
No 417
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.87 E-value=2.8e-22 Score=181.78 Aligned_cols=135 Identities=18% Similarity=0.248 Sum_probs=103.4
Q ss_pred eceecccCceEEEEEEEcCCCCEEEEEEeecccc------------------------------hHHHHHHHHHHcCCCC
Q 012233 142 ERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKR------------------------------YKNRELQIMRLLNHPN 191 (468)
Q Consensus 142 ~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~~------------------------------~~~~E~~il~~l~hpn 191 (468)
...||+|+||.||+|.+. +|+.||||++..... ...+|+.++..+.+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG 80 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 357999999999999986 899999999854311 1124899999998887
Q ss_pred cccccceeeecCCCCceEEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHh-HhcCCccccCCCCCCe
Q 012233 192 VVSLKHCFFSTTEKDELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYL-HHVVGVCHRDIKPQNL 270 (468)
Q Consensus 192 Iv~l~~~~~~~~~~~~~~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yL-H~~~givHrDlkp~NI 270 (468)
+....... . .. .+|||||++++.+.... .....++...+..++.|++.+|.|| |+ .||+||||||+||
T Consensus 81 v~~p~~~~-~----~~--~~iVmE~i~g~~l~~~~---~~~~~~~~~~~~~i~~qi~~~L~~l~H~-~giiHrDlkP~NI 149 (190)
T cd05147 81 IPCPEPIL-L----KS--HVLVMEFIGDDGWAAPR---LKDAPLSESKARELYLQVIQIMRILYQD-CRLVHADLSEYNL 149 (190)
T ss_pred CCCCcEEE-e----cC--CEEEEEEeCCCCCcchh---hhcCCCCHHHHHHHHHHHHHHHHHHHHh-CCcccCCCCHHHE
Confidence 74433221 1 11 26999999986443211 1135688889999999999999999 66 8999999999999
Q ss_pred eecCCCCcEEEeeecCcccc
Q 012233 271 LVNPHTHQLKICDFGSAKML 290 (468)
Q Consensus 271 Ll~~~~~~vkL~DFG~a~~~ 290 (468)
|++. + .++|+|||+|...
T Consensus 150 li~~-~-~v~LiDFG~a~~~ 167 (190)
T cd05147 150 LYHD-G-KLYIIDVSQSVEH 167 (190)
T ss_pred EEEC-C-cEEEEEccccccC
Confidence 9984 4 6999999999643
No 418
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.86 E-value=9.9e-22 Score=180.64 Aligned_cols=170 Identities=14% Similarity=0.149 Sum_probs=125.1
Q ss_pred cceEEeceecccCceEEEEEEEcCCCCEEEEEEeecc----cch---------HHHHHHHHHHcCCCCcccccceeeecC
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD----KRY---------KNRELQIMRLLNHPNVVSLKHCFFSTT 203 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~----~~~---------~~~E~~il~~l~hpnIv~l~~~~~~~~ 203 (468)
.+|++.++||.|+||.||++.. ++..+|||++... ... .++|+..+.++.|++|..+.+++....
T Consensus 31 ~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~ 108 (232)
T PRK10359 31 YNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAE 108 (232)
T ss_pred CceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeecc
Confidence 3699999999999999999765 5778999988532 111 467888999999999999988865432
Q ss_pred CC---CceEEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEE
Q 012233 204 EK---DELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLK 280 (468)
Q Consensus 204 ~~---~~~~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vk 280 (468)
.. .....+|||||++|..+.... .++. ....+++.+|..||+ .|++|||+||+||++++++ ++
T Consensus 109 ~~~~~~~~~~~lvmEyi~G~tL~~~~-------~~~~----~~~~~i~~~l~~lH~-~gi~H~Dikp~Nili~~~g--i~ 174 (232)
T PRK10359 109 RKTLRYAHTYIMLIEYIEGVELNDMP-------EISE----DVKAKIKASIESLHQ-HGMVSGDPHKGNFIVSKNG--LR 174 (232)
T ss_pred cccccccCCeEEEEEEECCccHHHhh-------hccH----HHHHHHHHHHHHHHH-cCCccCCCChHHEEEeCCC--EE
Confidence 11 122477999999986553221 1222 245699999999998 8999999999999999876 99
Q ss_pred EeeecCccccCCCCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHH
Q 012233 281 ICDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELL 334 (468)
Q Consensus 281 L~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell 334 (468)
|+|||..+........ . ..+.. ..|+.++|+|+||+.+..+.
T Consensus 175 liDfg~~~~~~e~~a~-d----------~~vle-r~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 175 IIDLSGKRCTAQRKAK-D----------RIDLE-RHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred EEECCCcccccchhhH-H----------HHHHH-hHhcccccccceeEeehHHH
Confidence 9999988654221111 0 02222 23678999999999987654
No 419
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.86 E-value=3.9e-21 Score=173.08 Aligned_cols=181 Identities=18% Similarity=0.139 Sum_probs=133.5
Q ss_pred EEeceecccCceEEEEEEEcCCCCEEEEEEeecccc--------hHHHHHHHHHHcC-CCCcccccceeeecCCCCceEE
Q 012233 140 MAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKR--------YKNRELQIMRLLN-HPNVVSLKHCFFSTTEKDELYL 210 (468)
Q Consensus 140 ~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~~--------~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~~~~~ 210 (468)
.+...|++|+||+||++.. .+..++.+.+..... .+.+|+++|++|. |++|++++++. ..
T Consensus 5 ~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~~---------~~ 73 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHWD---------GR 73 (218)
T ss_pred ccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEEc---------CE
Confidence 3556899999999998775 678888776644332 3568999999996 47888887742 15
Q ss_pred EEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCC-CCCCeeecCCCCcEEEeeecCccc
Q 012233 211 NLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDI-KPQNLLVNPHTHQLKICDFGSAKM 289 (468)
Q Consensus 211 ~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDl-kp~NILl~~~~~~vkL~DFG~a~~ 289 (468)
+++|||+.|..+.... +.. ...++.|++.+|.+||. +||+|||| ||+|||++.++ .++|+|||++..
T Consensus 74 ~lvmeyI~G~~L~~~~---------~~~-~~~~~~qi~~~L~~lH~-~GIvHrDL~kp~NILv~~~g-~i~LIDFG~A~~ 141 (218)
T PRK12274 74 HLDRSYLAGAAMYQRP---------PRG-DLAYFRAARRLLQQLHR-CGVAHNDLAKEANWLVQEDG-SPAVIDFQLAVR 141 (218)
T ss_pred EEEEeeecCccHHhhh---------hhh-hHHHHHHHHHHHHHHHH-CcCccCCCCCcceEEEcCCC-CEEEEECCCcee
Confidence 7999999987654211 001 13467899999999998 89999999 79999999887 799999999986
Q ss_pred cCCCCCC--------------ccccccCCccccccccCCCCCC-cchhHHHHHHHHHHHHhCCCCCCCC
Q 012233 290 LVPGEPN--------------ISYICSRYYRAPELIFGATEYT-TAIDMWSIGCVLAELLLGQPLFPGE 343 (468)
Q Consensus 290 ~~~~~~~--------------~~~~gt~~y~aPE~~~~~~~~~-~~~DvwSlG~il~ell~G~~pf~~~ 343 (468)
....... .-..+++.|+.|+...-....+ ...++++.|+-+|.++|+..++-++
T Consensus 142 ~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~ 210 (218)
T PRK12274 142 GNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWED 210 (218)
T ss_pred cCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcccc
Confidence 5433211 0112478888888753322233 4678889999999999999887544
No 420
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.85 E-value=5e-21 Score=173.97 Aligned_cols=137 Identities=18% Similarity=0.235 Sum_probs=104.8
Q ss_pred eceecccCceEEEEEEEcCCCCEEEEEEeecccc------------------------------hHHHHHHHHHHcCCCC
Q 012233 142 ERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKR------------------------------YKNRELQIMRLLNHPN 191 (468)
Q Consensus 142 ~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~~------------------------------~~~~E~~il~~l~hpn 191 (468)
...||+|+||.||+|.+. +|+.||||++..... ...+|...+.++.|++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05145 2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAG 80 (190)
T ss_pred CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 467999999999999986 899999998864310 1246888999999998
Q ss_pred cccccceeeecCCCCceEEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCee
Q 012233 192 VVSLKHCFFSTTEKDELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLL 271 (468)
Q Consensus 192 Iv~l~~~~~~~~~~~~~~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NIL 271 (468)
|.....+... . .||||||++|+.+.... . ....++...+..++.|++.+|.+||...||+||||||+|||
T Consensus 81 i~~p~~~~~~-----~--~~lVmE~~~g~~~~~~~--l-~~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIl 150 (190)
T cd05145 81 VPVPEPILLK-----K--NVLVMEFIGDDGSPAPR--L-KDVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNIL 150 (190)
T ss_pred CCCceEEEec-----C--CEEEEEEecCCCchhhh--h-hhccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEE
Confidence 7554433311 1 36999999986322110 1 12456778889999999999999995379999999999999
Q ss_pred ecCCCCcEEEeeecCccccC
Q 012233 272 VNPHTHQLKICDFGSAKMLV 291 (468)
Q Consensus 272 l~~~~~~vkL~DFG~a~~~~ 291 (468)
++ ++ .++|+|||++....
T Consensus 151 l~-~~-~~~liDFG~a~~~~ 168 (190)
T cd05145 151 YH-DG-KPYIIDVSQAVELD 168 (190)
T ss_pred EE-CC-CEEEEEcccceecC
Confidence 99 55 79999999997653
No 421
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.84 E-value=5.1e-21 Score=173.36 Aligned_cols=239 Identities=17% Similarity=0.204 Sum_probs=177.4
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeec------ccchHHHHHHHHHHcCCCCcccccceeeecCCCCceEEE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQ------DKRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~------~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~ 211 (468)
+..+.-+|.+...|..|+|+| .|..++.|++.- ..+.+.+|.-.|+.+.||||+.+++.+ .....+.
T Consensus 191 ~lnl~tkl~e~hsgelwrgrw--qgndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgac-----nsppnlv 263 (448)
T KOG0195|consen 191 SLNLITKLAESHSGELWRGRW--QGNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGAC-----NSPPNLV 263 (448)
T ss_pred hhhhhhhhccCCCcccccccc--cCcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhc-----cCCCCce
Confidence 345566788999999999999 555666676532 235567788899999999999999999 5556688
Q ss_pred EEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCcccc-CCCCCCeeecCCCCcEEE--eeecCcc
Q 012233 212 LVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHR-DIKPQNLLVNPHTHQLKI--CDFGSAK 288 (468)
Q Consensus 212 lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHr-Dlkp~NILl~~~~~~vkL--~DFG~a~ 288 (468)
+|..|++-+.+.-+.+. ...--++-.++.+++.++++|++|||+.-.++-| -|....++||.+. +.+| +|--++-
T Consensus 264 ~isq~mp~gslynvlhe-~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedl-tarismad~kfsf 341 (448)
T KOG0195|consen 264 IISQYMPFGSLYNVLHE-QTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDL-TARISMADTKFSF 341 (448)
T ss_pred EeeeeccchHHHHHHhc-CccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchh-hhheecccceeee
Confidence 99999995544433332 1223356677899999999999999985556654 6888899999876 5554 3332221
Q ss_pred ccCCCCCCccccccCCccccccccCCCC--CCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhh
Q 012233 289 MLVPGEPNISYICSRYYRAPELIFGATE--YTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKC 366 (468)
Q Consensus 289 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~--~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 366 (468)
...+....|.||+||.+...+. .-.++|+|||++++|||.|...||...++.+--.+|.-.
T Consensus 342 ------qe~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkiale----------- 404 (448)
T KOG0195|consen 342 ------QEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALE----------- 404 (448)
T ss_pred ------eccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhc-----------
Confidence 1224456899999999976554 235899999999999999999999988877765554321
Q ss_pred cCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHh
Q 012233 367 MNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEAC 418 (468)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell 418 (468)
.+...+++.++.....|+.-|+..||.+||.++.+.
T Consensus 405 ----------------glrv~ippgis~hm~klm~icmnedpgkrpkfdmiv 440 (448)
T KOG0195|consen 405 ----------------GLRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIV 440 (448)
T ss_pred ----------------cccccCCCCccHHHHHHHHHHhcCCCCcCCCcceeh
Confidence 111225677899999999999999999999987754
No 422
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.81 E-value=3e-20 Score=183.36 Aligned_cols=181 Identities=28% Similarity=0.448 Sum_probs=136.4
Q ss_pred ceEEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecC
Q 012233 207 ELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGS 286 (468)
Q Consensus 207 ~~~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~ 286 (468)
..++||.|++|....+.......+.....+......++.|+..|++| +|.+|+|+||.||+...+. ++||.|||+
T Consensus 328 ~~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y----k~~ihrdlkp~nif~~~d~-q~kIgDFgl 402 (516)
T KOG1033|consen 328 KVYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY----KGLIHRDLKPSNIFFSDDD-QLKIGDFGL 402 (516)
T ss_pred ccchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh----ccchhhhccccccccccch-hhhhhhhhh
Confidence 34689999999977666555445556667778889999999999999 5999999999999998777 899999999
Q ss_pred ccccCCCC-------CCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCC
Q 012233 287 AKMLVPGE-------PNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLL-GQPLFPGESGVDQLVEIIKILGT 358 (468)
Q Consensus 287 a~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~-G~~pf~~~~~~~~~~~i~~~~~~ 358 (468)
........ ......||..||+||.+.+.. |+.++||||||+||+||++ =...|. .....
T Consensus 403 ~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~-y~~kvdIyaLGlil~EL~~~f~T~~e------r~~t~------ 469 (516)
T KOG1033|consen 403 VTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQ-YSEKVDIYALGLILAELLIQFSTQFE------RIATL------ 469 (516)
T ss_pred eeecccCCcccchhhhhhhcccccccCCHHHHhhhh-hhhhcchhhHHHHHHHHHHHhccHHH------HHHhh------
Confidence 98776555 566788999999999998765 9999999999999999997 222221 11110
Q ss_pred CCHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCC
Q 012233 359 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFD 424 (468)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~ 424 (468)
..+....|.+.+..+. +.-.+|+..||...|.+||++.+.-.|+|.+
T Consensus 470 ------------------~d~r~g~ip~~~~~d~-p~e~~ll~~lls~~p~~RP~~~~~~~~~~~~ 516 (516)
T KOG1033|consen 470 ------------------TDIRDGIIPPEFLQDY-PEEYTLLQQLLSPSPEERPSAIEVALHEFLQ 516 (516)
T ss_pred ------------------hhhhcCCCChHHhhcC-cHHHHHHHHhcCCCcccCchHHHHhhhhhcC
Confidence 0111111111122222 3456899999999999999988888888863
No 423
>PRK10345 hypothetical protein; Provisional
Probab=99.80 E-value=5.2e-19 Score=162.04 Aligned_cols=133 Identities=18% Similarity=0.238 Sum_probs=97.5
Q ss_pred eceecccCceEEEEEEEcCCCCEEEEEEeecc----cchHHHHHHHHHHc-----CCCCcccccceeeecCCCCceE-EE
Q 012233 142 ERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD----KRYKNRELQIMRLL-----NHPNVVSLKHCFFSTTEKDELY-LN 211 (468)
Q Consensus 142 ~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~----~~~~~~E~~il~~l-----~hpnIv~l~~~~~~~~~~~~~~-~~ 211 (468)
.+.||+|+||.||. +..++.. +||++... .....+|+.+++.+ .||||+++++++.+.. +..+ +.
T Consensus 7 ~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~--g~g~v~~ 81 (210)
T PRK10345 7 QSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDC--GTGYVYD 81 (210)
T ss_pred cceecCCCceEEEE--CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCC--CCeEEEE
Confidence 46799999999996 6667666 68987643 34567899999999 5799999999885543 2234 34
Q ss_pred EEeeccc--c-hHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHH-HHhHhcCCccccCCCCCCeeecCCC---CcEEEeee
Q 012233 212 LVLEYIS--E-TVYRVSKHYTRMNQHVPILYVQLYTYQICRAL-NYLHHVVGVCHRDIKPQNLLVNPHT---HQLKICDF 284 (468)
Q Consensus 212 lv~e~~~--~-~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL-~yLH~~~givHrDlkp~NILl~~~~---~~vkL~DF 284 (468)
+||||++ + ++.+.+.. ..+++. ..++.|++.++ +|||+ ++|+||||||+|||++..+ ..++|+||
T Consensus 82 ~I~e~~G~~~~tL~~~l~~-----~~~~e~--~~~~~~~L~~l~~yLh~-~~IvhrDlKp~NILl~~~~~~~~~~~LiDg 153 (210)
T PRK10345 82 VIADFDGKPSITLTEFAEQ-----CRYEED--VAQLRQLLKKLKRYLLD-NRIVTMELKPQNILCQRISESEVIPVVCDN 153 (210)
T ss_pred EEecCCCCcchhHHHHHHc-----ccccHh--HHHHHHHHHHHHHHHHH-CCEeecCCCHHHEEEeccCCCCCcEEEEEC
Confidence 7899954 4 44444422 235544 35677888777 99998 9999999999999997432 26999995
Q ss_pred cCc
Q 012233 285 GSA 287 (468)
Q Consensus 285 G~a 287 (468)
+-+
T Consensus 154 ~G~ 156 (210)
T PRK10345 154 IGE 156 (210)
T ss_pred CCC
Confidence 443
No 424
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.80 E-value=3e-19 Score=191.30 Aligned_cols=189 Identities=24% Similarity=0.387 Sum_probs=144.9
Q ss_pred cceEEeceecccCceEEEEEEEcCCCCEEEEEEeecccc-hHHHHHHHHHHcC---CCCcccccceeeecCCCCceEEEE
Q 012233 137 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKR-YKNRELQIMRLLN---HPNVVSLKHCFFSTTEKDELYLNL 212 (468)
Q Consensus 137 ~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~~-~~~~E~~il~~l~---hpnIv~l~~~~~~~~~~~~~~~~l 212 (468)
..|.|.+.||+|+||.||+|.... |+.||||+-....- .+.--.+++.+|+ -+-|+.+..++...+. .+|
T Consensus 698 ~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~WEfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~-----S~l 771 (974)
T KOG1166|consen 698 EKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPWEFYICLQVMERLKPQMLPSIMHISSAHVFQNA-----SVL 771 (974)
T ss_pred eeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCceeeeehHHHHHhhchhhhcchHHHHHHHccCCc-----cee
Confidence 469999999999999999999866 99999996533211 1111223444444 3455555555543332 568
Q ss_pred Eeeccc-chHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecC------CCCcEEEeeec
Q 012233 213 VLEYIS-ETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNP------HTHQLKICDFG 285 (468)
Q Consensus 213 v~e~~~-~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~------~~~~vkL~DFG 285 (468)
|+||.+ |++++++. ..+.+++..+..++.|+++-++.||. .+|||+||||+|+||.. +...++|+|||
T Consensus 772 v~ey~~~Gtlld~~N----~~~~m~e~lv~~~~~qml~ive~lH~-~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG 846 (974)
T KOG1166|consen 772 VSEYSPYGTLLDLIN----TNKVMDEYLVMFFSCQMLRIVEHLHA-MGIIHGDIKPDNFLLRREICADSDSKGLYLIDFG 846 (974)
T ss_pred eeeccccccHHHhhc----cCCCCCchhhhHHHHHHHHHHHHHHh-cceecccCCcceeEeecccCCCCcccceEEEecc
Confidence 999999 56666655 46778888899999999999999997 89999999999999832 22259999999
Q ss_pred Ccccc---CCCCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCC
Q 012233 286 SAKML---VPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQ 337 (468)
Q Consensus 286 ~a~~~---~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~ 337 (468)
.+-.+ .++......++|-.+-.+|+..|.+ +++.+|.|.|+.+++-||.|+
T Consensus 847 ~siDm~lfp~~~~F~~~~~td~f~C~EM~~grp-WtYq~DyfGlAa~~h~mLFG~ 900 (974)
T KOG1166|consen 847 RSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRP-WTYQIDYFGLAATVHVMLFGK 900 (974)
T ss_pred cceeeeEcCCCcEEeeeeccccchhHHHhcCCC-CchhhhhHHHHHHHHHHHHHH
Confidence 98544 3343455677888999999998776 999999999999999999996
No 425
>smart00090 RIO RIO-like kinase.
Probab=99.79 E-value=3.8e-19 Score=166.76 Aligned_cols=139 Identities=17% Similarity=0.144 Sum_probs=105.0
Q ss_pred ceEEeceecccCceEEEEEE-EcCCCCEEEEEEeeccc----------------------------chHHHHHHHHHHcC
Q 012233 138 SYMAERVVGTGSFGVVFQAK-CLETGDSVAIKKVLQDK----------------------------RYKNRELQIMRLLN 188 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~-~~~~g~~vaiK~~~~~~----------------------------~~~~~E~~il~~l~ 188 (468)
.|.+.+.||+|+||.||+|. +..+|+.||||++.... ....+|+.+++++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 48899999999999999998 66789999999885431 11346999999997
Q ss_pred CCCcccccceeeecCCCCceEEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCC-ccccCCCC
Q 012233 189 HPNVVSLKHCFFSTTEKDELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVG-VCHRDIKP 267 (468)
Q Consensus 189 hpnIv~l~~~~~~~~~~~~~~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~g-ivHrDlkp 267 (468)
+. ++.+...+.. . ..++||||+++..+.... .....+....+..++.||+.+|.+||. .| |+||||||
T Consensus 109 ~~-~i~~p~~~~~-~-----~~~lV~E~~~g~~L~~~~---~~~~~~~~~~~~~i~~qi~~~l~~LH~-~g~iiH~Dikp 177 (237)
T smart00090 109 EA-GVPVPKPIAW-R-----RNVLVMEFIGGDGLPAPR---LKDVEPEEEEEFELYDDILEEMRKLYK-EGELVHGDLSE 177 (237)
T ss_pred hc-CCCCCeeeEe-c-----CceEEEEEecCCcccccc---cccCCcchHHHHHHHHHHHHHHHHHHh-cCCEEeCCCCh
Confidence 53 3333333321 1 136999999986543211 112334555677899999999999998 89 99999999
Q ss_pred CCeeecCCCCcEEEeeecCccc
Q 012233 268 QNLLVNPHTHQLKICDFGSAKM 289 (468)
Q Consensus 268 ~NILl~~~~~~vkL~DFG~a~~ 289 (468)
+||+++ ++ .++|+|||.+..
T Consensus 178 ~NIli~-~~-~i~LiDFg~a~~ 197 (237)
T smart00090 178 YNILVH-DG-KVVIIDVSQSVE 197 (237)
T ss_pred hhEEEE-CC-CEEEEEChhhhc
Confidence 999999 55 799999999864
No 426
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.74 E-value=3.2e-19 Score=187.26 Aligned_cols=257 Identities=26% Similarity=0.328 Sum_probs=192.5
Q ss_pred ceEEeceecccCceEEEEEEEcC-CCCEEEEEEeecc---cchH---HHHHHHHHHcC-CCCcccccceeeecCCCCceE
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLE-TGDSVAIKKVLQD---KRYK---NRELQIMRLLN-HPNVVSLKHCFFSTTEKDELY 209 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~-~g~~vaiK~~~~~---~~~~---~~E~~il~~l~-hpnIv~l~~~~~~~~~~~~~~ 209 (468)
.|.+.+.||+|+|+.|-.+.... ....+|.|.+... .... ..|..+-+.+. |.|++++++.. .+..+
T Consensus 21 ~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~-----~~~~~ 95 (601)
T KOG0590|consen 21 QYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPS-----SSPRS 95 (601)
T ss_pred cccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCcc-----CCCcc
Confidence 48888899999999998887633 3445666655332 2222 24777878887 99999999987 56666
Q ss_pred EEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhH-hcCCccccCCCCCCeeecCCCCcEEEeeecCcc
Q 012233 210 LNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLH-HVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAK 288 (468)
Q Consensus 210 ~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH-~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~ 288 (468)
.+++++|..|+.+-.... .......+...+..++.|+..++.|+| . .++.|+|+||+|.+++..+..+++.|||+|.
T Consensus 96 ~~~~~~~s~g~~~f~~i~-~~~~~~~~~~~~~~~~~ql~s~l~~~H~~-~~~~h~~ikP~n~~l~~s~~~l~~~df~~At 173 (601)
T KOG0590|consen 96 YLLSLSYSDGGSLFSKIS-HPDSTGTSSSSASRYLPQLNSGLSYLHPE-NGVTHRDIKPSNSLLDESGSALKIADFGLAT 173 (601)
T ss_pred cccccCcccccccccccc-cCCccCCCCcchhhhhhhhccCccccCcc-cccccCCCCCccchhccCCCcccCCCchhhc
Confidence 889999977653321110 111225667778899999999999999 7 8999999999999999776469999999998
Q ss_pred ccCC-CC---CCccccc-cCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHH
Q 012233 289 MLVP-GE---PNISYIC-SRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREE 363 (468)
Q Consensus 289 ~~~~-~~---~~~~~~g-t~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~ 363 (468)
.+.. .. .....+| ++.|+|||...+.....+..|+||+|+++.-+++|..|+......+..
T Consensus 174 ~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~-------------- 239 (601)
T KOG0590|consen 174 AYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGR-------------- 239 (601)
T ss_pred cccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccccccccc--------------
Confidence 7755 22 2335678 999999999987555788999999999999999999999765432210
Q ss_pred HhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCC
Q 012233 364 IKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDD 425 (468)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~ 425 (468)
|. .+...+ .......+..++..+.+++.++|..+|..|.+..++..+||+..
T Consensus 240 -------~~--~~~~~~-~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~~ 291 (601)
T KOG0590|consen 240 -------YS--SWKSNK-GRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKLDNWLSS 291 (601)
T ss_pred -------ce--eecccc-cccccCccccCChhhhhcccccccCCchhccccccccccccccc
Confidence 00 000000 11122345678999999999999999999999999999999998
No 427
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.73 E-value=1.6e-17 Score=151.97 Aligned_cols=131 Identities=18% Similarity=0.166 Sum_probs=100.8
Q ss_pred eEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc--------------------------chHHHHHHHHHHcCCCC-
Q 012233 139 YMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK--------------------------RYKNRELQIMRLLNHPN- 191 (468)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~--------------------------~~~~~E~~il~~l~hpn- 191 (468)
|.+.+.||+|+||.||++... +|+.||||++.... ....+|..++..+.|++
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 95 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGF 95 (198)
T ss_pred hhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCC
Confidence 888899999999999999874 79999999864321 11346888888888774
Q ss_pred -cccccceeeecCCCCceEEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCe
Q 012233 192 -VVSLKHCFFSTTEKDELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNL 270 (468)
Q Consensus 192 -Iv~l~~~~~~~~~~~~~~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NI 270 (468)
+..+++. ...++||||+.|..+..... ......++.+++.++.++|+ .||+|+||||+||
T Consensus 96 ~v~~~~~~---------~~~~lv~e~~~g~~L~~~~~---------~~~~~~~~~~i~~~l~~lh~-~gi~H~Dl~p~Ni 156 (198)
T cd05144 96 PVPKPIDW---------NRHAVVMEYIDGVELYRVRV---------LEDPEEVLDEILEEIVKAYK-HGIIHGDLSEFNI 156 (198)
T ss_pred CCCceeec---------CCceEEEEEeCCcchhhccc---------cccHHHHHHHHHHHHHHHHH-CCCCcCCCCcccE
Confidence 3333221 12479999999875542211 02356788899999999998 8999999999999
Q ss_pred eecCCCCcEEEeeecCcccc
Q 012233 271 LVNPHTHQLKICDFGSAKML 290 (468)
Q Consensus 271 Ll~~~~~~vkL~DFG~a~~~ 290 (468)
+++.++ .++|+|||.+...
T Consensus 157 ll~~~~-~~~liDfg~~~~~ 175 (198)
T cd05144 157 LVDDDE-KIYIIDWPQMVST 175 (198)
T ss_pred EEcCCC-cEEEEECCccccC
Confidence 999877 8999999998654
No 428
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.72 E-value=4e-17 Score=150.84 Aligned_cols=130 Identities=21% Similarity=0.315 Sum_probs=100.6
Q ss_pred ceecccCceEEEEEEEcCCCCEEEEEEeeccc------------chHHHHHHHHHHcCCCCcccccceeeecCCCCceEE
Q 012233 143 RVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYL 210 (468)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~------------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~ 210 (468)
+.||+|++|.||+|.+ .|..+++|+..... ....+|+.++..+.|++|.....++... ...
T Consensus 2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~-----~~~ 74 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDP-----ENF 74 (211)
T ss_pred cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeC-----CCC
Confidence 5799999999999987 77889999754211 1234689999999999987766655332 236
Q ss_pred EEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccc
Q 012233 211 NLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (468)
Q Consensus 211 ~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~ 289 (468)
++||||++|..+...... . .. ....++.+++.+|.+||+ .|++|+|++|.|||++ ++ .++|+|||.+..
T Consensus 75 ~lv~e~~~G~~L~~~~~~---~---~~-~~~~i~~~i~~~l~~lH~-~~i~H~Dl~p~Nil~~-~~-~~~liDf~~a~~ 143 (211)
T PRK14879 75 IIVMEYIEGEPLKDLINS---N---GM-EELELSREIGRLVGKLHS-AGIIHGDLTTSNMILS-GG-KIYLIDFGLAEF 143 (211)
T ss_pred EEEEEEeCCcCHHHHHHh---c---cH-HHHHHHHHHHHHHHHHHh-CCcccCCCCcccEEEE-CC-CEEEEECCcccC
Confidence 799999987655432221 1 11 677889999999999998 8999999999999999 55 799999999864
No 429
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.71 E-value=2.3e-17 Score=165.98 Aligned_cols=206 Identities=24% Similarity=0.324 Sum_probs=146.2
Q ss_pred HHHcCCCCcccccceeeecCCCCceEEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCcccc
Q 012233 184 MRLLNHPNVVSLKHCFFSTTEKDELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHR 263 (468)
Q Consensus 184 l~~l~hpnIv~l~~~~~~~~~~~~~~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHr 263 (468)
|+.+.|.|+.++++.++.. ..+++|.+||+.+.+..+... ....++......++++|+.||.|||+.....|+
T Consensus 1 l~~l~h~n~~~f~g~~~~~-----~~~~~i~~~c~rGsl~D~i~~--~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg 73 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDG-----PEMIVIWEYCSRGSLLDILSN--EDIKLDYFFILSFIRDISKGLAYLHNSPIGYHG 73 (484)
T ss_pred CcccchhhhhhheeeEecC-----CceEEEEeeecCccHHhHHhc--cccCccHHHHHHHHHHHHHHHHHHhcCcceeee
Confidence 4678999999999999655 348899999996544433322 345677777888999999999999984444999
Q ss_pred CCCCCCeeecCCCCcEEEeeecCccccCCC---CCCccccccCCccccccccCCCC------CCcchhHHHHHHHHHHHH
Q 012233 264 DIKPQNLLVNPHTHQLKICDFGSAKMLVPG---EPNISYICSRYYRAPELIFGATE------YTTAIDMWSIGCVLAELL 334 (468)
Q Consensus 264 Dlkp~NILl~~~~~~vkL~DFG~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~------~~~~~DvwSlG~il~ell 334 (468)
.|+..|+++|... .+||+|||+....... .......-..-|.|||.+.+... .+.+.|+||||++++|++
T Consensus 74 ~l~s~nClvd~~w-~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~ 152 (484)
T KOG1023|consen 74 ALKSSNCLVDSRW-VLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEIL 152 (484)
T ss_pred eeccccceeeeeE-EEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHH
Confidence 9999999999887 8999999998765321 11111122456999999976421 366799999999999999
Q ss_pred hCCCCCCCCCcH----HHHHHHHHHhCCCCHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCC
Q 012233 335 LGQPLFPGESGV----DQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSL 410 (468)
Q Consensus 335 ~G~~pf~~~~~~----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~ 410 (468)
+...||...... +.+..+.+....+.+. . .... ..+++++..++..||..+|..
T Consensus 153 ~r~~~~~~~~~~~~~~eii~~~~~~~~~~~rP---------------~------i~~~-~e~~~~l~~l~~~cw~e~P~~ 210 (484)
T KOG1023|consen 153 FRSGPFDLRNLVEDPDEIILRVKKGGSNPFRP---------------S------IELL-NELPPELLLLVARCWEEIPEK 210 (484)
T ss_pred hccCccccccccCChHHHHHHHHhcCCCCcCc---------------c------hhhh-hhcchHHHHHHHHhcccChhh
Confidence 999999863322 2222222201111111 0 0001 135668999999999999999
Q ss_pred CCCHHHHhC
Q 012233 411 RCTALEACA 419 (468)
Q Consensus 411 R~s~~ell~ 419 (468)
||+++++-.
T Consensus 211 rPs~~~i~~ 219 (484)
T KOG1023|consen 211 RPSIEQIRS 219 (484)
T ss_pred CccHHHHHh
Confidence 999998854
No 430
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.70 E-value=9.7e-17 Score=146.85 Aligned_cols=126 Identities=19% Similarity=0.302 Sum_probs=94.8
Q ss_pred eecccCceEEEEEEEcCCCCEEEEEEeeccc------------chHHHHHHHHHHcCCCCcccccceeeecCCCCceEEE
Q 012233 144 VVGTGSFGVVFQAKCLETGDSVAIKKVLQDK------------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLN 211 (468)
Q Consensus 144 ~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~------------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~ 211 (468)
.||+|+||.||+|.+ +|..|++|...... ....+|+++++.+.|+++.....++... ...+
T Consensus 1 ~ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~-----~~~~ 73 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDP-----DNKT 73 (199)
T ss_pred CCCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC-----CCCE
Confidence 489999999999985 67889999854321 2234699999999988765544443222 1257
Q ss_pred EEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccc
Q 012233 212 LVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (468)
Q Consensus 212 lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~ 289 (468)
+||||++|..+...... .. ..++.|++.+|.+||+ .|++|+|++|.||+++ ++ .++++|||++..
T Consensus 74 lv~e~~~g~~l~~~~~~---~~-------~~~~~~i~~~l~~lH~-~gi~H~Dl~~~Nil~~-~~-~~~liDfg~a~~ 138 (199)
T TIGR03724 74 IVMEYIEGKPLKDVIEE---GN-------DELLREIGRLVGKLHK-AGIVHGDLTTSNIIVR-DD-KLYLIDFGLGKY 138 (199)
T ss_pred EEEEEECCccHHHHHhh---cH-------HHHHHHHHHHHHHHHH-CCeecCCCCcceEEEE-CC-cEEEEECCCCcC
Confidence 99999988655432211 10 0678899999999998 8999999999999999 55 799999999865
No 431
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.68 E-value=1.3e-16 Score=167.75 Aligned_cols=131 Identities=18% Similarity=0.280 Sum_probs=98.8
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeecc------------cchHHHHHHHHHHcCCCCcccccceeeecCCC
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD------------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEK 205 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~------------~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 205 (468)
.|...+.||+|+||.||++.+. +..+++|+.... .....+|+++++.++|++|+..+.++...
T Consensus 334 ~~~~~~~iG~G~~g~Vy~~~~~--~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~--- 408 (535)
T PRK09605 334 RKIPDHLIGKGAEADIKKGEYL--GRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDP--- 408 (535)
T ss_pred ccCccceeccCCcEEEEEEeec--CccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeC---
Confidence 4567889999999999999874 344444432111 12245799999999999998876555332
Q ss_pred CceEEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeec
Q 012233 206 DELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFG 285 (468)
Q Consensus 206 ~~~~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG 285 (468)
...++||||++++.+..... ....++.|++.+|.|||+ .||+||||||+|||++ ++ .++|+|||
T Consensus 409 --~~~~lv~E~~~g~~L~~~l~-----------~~~~~~~~i~~~L~~lH~-~giiHrDlkp~NILl~-~~-~~~liDFG 472 (535)
T PRK09605 409 --EEKTIVMEYIGGKDLKDVLE-----------GNPELVRKVGEIVAKLHK-AGIVHGDLTTSNFIVR-DD-RLYLIDFG 472 (535)
T ss_pred --CCCEEEEEecCCCcHHHHHH-----------HHHHHHHHHHHHHHHHHh-CCCccCCCChHHEEEE-CC-cEEEEeCc
Confidence 23579999999865543221 246788999999999998 8999999999999995 44 69999999
Q ss_pred Cccc
Q 012233 286 SAKM 289 (468)
Q Consensus 286 ~a~~ 289 (468)
+++.
T Consensus 473 la~~ 476 (535)
T PRK09605 473 LGKY 476 (535)
T ss_pred cccc
Confidence 9865
No 432
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.66 E-value=5.3e-16 Score=140.45 Aligned_cols=131 Identities=22% Similarity=0.195 Sum_probs=90.9
Q ss_pred eceecccCceEEEEEEEcCCCCEEEEEEeecccchH----------------------------HHHHHHHHHcCCCC--
Q 012233 142 ERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRYK----------------------------NRELQIMRLLNHPN-- 191 (468)
Q Consensus 142 ~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~~~~----------------------------~~E~~il~~l~hpn-- 191 (468)
.+.||+|+||+||+|.+. +|+.||||++....... ..|...+..+.+..
T Consensus 2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~ 80 (187)
T cd05119 2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVP 80 (187)
T ss_pred CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCC
Confidence 467999999999999976 79999999875432110 23444455554332
Q ss_pred cccccceeeecCCCCceEEEEEeecccchHHH--HHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCC
Q 012233 192 VVSLKHCFFSTTEKDELYLNLVLEYISETVYR--VSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQN 269 (468)
Q Consensus 192 Iv~l~~~~~~~~~~~~~~~~lv~e~~~~~ll~--~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~N 269 (468)
+.+++.+. ..++||||++++... .+.... .. ..++.++.+++.++.+||...||+|+||||+|
T Consensus 81 ~~~~~~~~---------~~~lv~e~~~g~~~~~~~l~~~~-----~~-~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~N 145 (187)
T cd05119 81 VPKPIDLN---------RHVLVMEFIGGDGIPAPRLKDVR-----LL-EDPEELYDQILELMRKLYREAGLVHGDLSEYN 145 (187)
T ss_pred CCceEecC---------CCEEEEEEeCCCCccChhhhhhh-----hc-ccHHHHHHHHHHHHHHHhhccCcCcCCCChhh
Confidence 23332211 247999999983211 011110 01 45788999999999999953799999999999
Q ss_pred eeecCCCCcEEEeeecCcccc
Q 012233 270 LLVNPHTHQLKICDFGSAKML 290 (468)
Q Consensus 270 ILl~~~~~~vkL~DFG~a~~~ 290 (468)
|+++ ++ .++|+|||.+...
T Consensus 146 ili~-~~-~~~liDfg~a~~~ 164 (187)
T cd05119 146 ILVD-DG-KVYIIDVPQAVEI 164 (187)
T ss_pred EEEE-CC-cEEEEECcccccc
Confidence 9999 55 7999999999654
No 433
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.61 E-value=1.9e-15 Score=130.89 Aligned_cols=131 Identities=21% Similarity=0.284 Sum_probs=103.2
Q ss_pred EeceecccCceEEEEEEEcCCCCEEEEEEeecccc--hHHHHHHHHHHcCC--CCcccccceeeecCCCCceEEEEEeec
Q 012233 141 AERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKR--YKNRELQIMRLLNH--PNVVSLKHCFFSTTEKDELYLNLVLEY 216 (468)
Q Consensus 141 ~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~~--~~~~E~~il~~l~h--pnIv~l~~~~~~~~~~~~~~~~lv~e~ 216 (468)
+.+.||.|.++.||++.. .+..+++|....... ...+|+.+++.++| .++.+++.++ ......+++|||
T Consensus 2 ~~~~i~~g~~~~v~~~~~--~~~~~~iK~~~~~~~~~~~~~e~~~~~~l~~~~~~~p~~~~~~-----~~~~~~~~v~e~ 74 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGT--KDEDYVLKINPSREKGADREREVAILQLLARKGLPVPKVLASG-----ESDGWSYLLMEW 74 (155)
T ss_pred cceecccccccceEEEEe--cCCeEEEEecCCCCchhHHHHHHHHHHHHHHcCCCCCeEEEEc-----CCCCccEEEEEe
Confidence 346799999999999997 347899998866543 56789999999987 4888877665 222457899999
Q ss_pred ccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhc--CCccccCCCCCCeeecCCCCcEEEeeecCccc
Q 012233 217 ISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHV--VGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (468)
Q Consensus 217 ~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~--~givHrDlkp~NILl~~~~~~vkL~DFG~a~~ 289 (468)
+.+..+... +......++.+++.+|++||.. .+++|+|++|+|||++..+ .++++|||.+..
T Consensus 75 ~~g~~~~~~----------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~-~~~l~Df~~~~~ 138 (155)
T cd05120 75 IEGETLDEV----------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGK-ILGIIDWEYAGY 138 (155)
T ss_pred cCCeecccC----------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCc-EEEEEecccccC
Confidence 987644311 4455667889999999999963 2799999999999999866 799999999864
No 434
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.60 E-value=4.7e-15 Score=149.49 Aligned_cols=247 Identities=26% Similarity=0.298 Sum_probs=187.1
Q ss_pred ceEEeceecc--cCceEEEEEEE--cCCCCEEEEEEee------cccchHHHHHHHHHHcC-CCCcccccceeeecCCCC
Q 012233 138 SYMAERVVGT--GSFGVVFQAKC--LETGDSVAIKKVL------QDKRYKNRELQIMRLLN-HPNVVSLKHCFFSTTEKD 206 (468)
Q Consensus 138 ~y~~~~~lG~--G~fg~Vy~~~~--~~~g~~vaiK~~~------~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~ 206 (468)
.+.+...+|. |.+|.||.+.+ ..++..+|+|.-+ .......+|+.-.+.+. |+|.++.+..+ .+
T Consensus 115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~-----e~ 189 (524)
T KOG0601|consen 115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAW-----EG 189 (524)
T ss_pred hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCccc-----cc
Confidence 3667788999 99999999999 8899999999631 12233345666656664 89999977777 55
Q ss_pred ceEEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHH----HHHHhHhcCCccccCCCCCCeeecCCCCcEEEe
Q 012233 207 ELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICR----ALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKIC 282 (468)
Q Consensus 207 ~~~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~----aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~ 282 (468)
...+|+-+|+|+..+..... .....++...++.+..+... ||..+|. .+++|-|+||+||++..+...++++
T Consensus 190 ~~~lfiqtE~~~~sl~~~~~---~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs-~~~~~~~~kp~~i~~~~~~~s~~~~ 265 (524)
T KOG0601|consen 190 SGILFIQTELCGESLQSYCH---TPCNFLPDNLLWNSLRDWLSRDVTALSHLHS-NNIVHDDLKPANIFTTSDWTSCKLT 265 (524)
T ss_pred CCcceeeeccccchhHHhhh---cccccCCchhhhhHHhhhhhcccccccccCC-CcccccccchhheecccccceeecC
Confidence 55689999999976665332 22344788889999999999 9999997 8999999999999999884479999
Q ss_pred eecCccccCCCCCCc------cccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCC--CcHHHHHHHHH
Q 012233 283 DFGSAKMLVPGEPNI------SYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGE--SGVDQLVEIIK 354 (468)
Q Consensus 283 DFG~a~~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~--~~~~~~~~i~~ 354 (468)
|||+...+....... ...|...|++||+..+ -++...|+|++|.++.+..+|..++... +.+.++..
T Consensus 266 df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~--l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~--- 340 (524)
T KOG0601|consen 266 DFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNG--LATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQ--- 340 (524)
T ss_pred CcceeEEccCCccccceeeeecCCCCceEeChhhhcc--ccchHhhhcchhhhhHhhHhhcccccCCCCCCcccccc---
Confidence 999998876554221 2256778999999854 3899999999999999999988776543 22221111
Q ss_pred HhCCCCHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCC
Q 012233 355 ILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDD 425 (468)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~ 425 (468)
.| ....|-...+.++...+..|++.+|..|+++..+++|+++..
T Consensus 341 ---------------~~------------ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s 384 (524)
T KOG0601|consen 341 ---------------GY------------IPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHS 384 (524)
T ss_pred ---------------cc------------CchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccc
Confidence 11 011122345667777999999999999999999999999885
No 435
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.60 E-value=1.4e-14 Score=136.20 Aligned_cols=133 Identities=16% Similarity=0.253 Sum_probs=94.8
Q ss_pred ceec-ccCceEEEEEEEcCCCCEEEEEEeecc-----------------cchHHHHHHHHHHcCCCCc--ccccceeeec
Q 012233 143 RVVG-TGSFGVVFQAKCLETGDSVAIKKVLQD-----------------KRYKNRELQIMRLLNHPNV--VSLKHCFFST 202 (468)
Q Consensus 143 ~~lG-~G~fg~Vy~~~~~~~g~~vaiK~~~~~-----------------~~~~~~E~~il~~l~hpnI--v~l~~~~~~~ 202 (468)
.+|| .|+.|+||.+.. .+..++||.+... .....+|+.++..|.|++| ++.+++....
T Consensus 37 ~~lg~~~g~gtv~~v~~--~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQT--PGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred ceeecCCCCccEEEEEe--CCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 4577 788888988876 4788999977321 1123569999999998885 5555543221
Q ss_pred CCCCceEEEEEeecccc--hHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEE
Q 012233 203 TEKDELYLNLVLEYISE--TVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLK 280 (468)
Q Consensus 203 ~~~~~~~~~lv~e~~~~--~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vk 280 (468)
. ......++|||+++| .+...+. ...++.. .+.||+.+|.+||+ .||+||||||+|||++.++ .++
T Consensus 115 ~-~~~~~~~lV~e~l~G~~~L~~~l~-----~~~l~~~----~~~~i~~~l~~lH~-~GI~HrDlkp~NILv~~~~-~v~ 182 (239)
T PRK01723 115 H-GLFYRADILIERIEGARDLVALLQ-----EAPLSEE----QWQAIGQLIARFHD-AGVYHADLNAHNILLDPDG-KFW 182 (239)
T ss_pred c-CcceeeeEEEEecCCCCCHHHHHh-----cCCCCHH----HHHHHHHHHHHHHH-CCCCCCCCCchhEEEcCCC-CEE
Confidence 1 111123599999996 3333322 1234433 35689999999998 8999999999999999877 799
Q ss_pred EeeecCccc
Q 012233 281 ICDFGSAKM 289 (468)
Q Consensus 281 L~DFG~a~~ 289 (468)
|+|||.+..
T Consensus 183 LIDfg~~~~ 191 (239)
T PRK01723 183 LIDFDRGEL 191 (239)
T ss_pred EEECCCccc
Confidence 999999864
No 436
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.56 E-value=2.2e-15 Score=159.12 Aligned_cols=271 Identities=25% Similarity=0.289 Sum_probs=193.1
Q ss_pred ccceEEeceecccCceEEEEEEEcCCCCEEEEEEeeccc-------chHHHHHHHHHHcCCCCcccccceeeecCCCCce
Q 012233 136 TISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-------RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDEL 208 (468)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 208 (468)
.+.+.+.+-+-+|.++.++.+.-..+|...++|...... .....+-.++-...+|-++...-.| ....
T Consensus 803 ~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~-----~~rs 877 (1205)
T KOG0606|consen 803 PDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSF-----PCRS 877 (1205)
T ss_pred CccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCC-----CCCC
Confidence 346778888999999999999887788666666543322 1122233333334456666543332 2222
Q ss_pred EEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCcc
Q 012233 209 YLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAK 288 (468)
Q Consensus 209 ~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~ 288 (468)
..+|+++|++++-+....+. ....+..-++.++..+..+++|||. ..++|+|++|.|+|+..++ ..++.|||...
T Consensus 878 P~~L~~~~~~~~~~~Skl~~---~~~~saepaRs~i~~~vqs~e~L~s-~~r~h~~~~p~~~l~~~~g-h~~l~~~~t~~ 952 (1205)
T KOG0606|consen 878 PLPLVGHYLNGGDLPSKLHN---SGCLSAEPARSPILERVQSLESLHS-SLRKHRDLKPDSLLIAYDG-HRPLTDFGTLS 952 (1205)
T ss_pred CcchhhHHhccCCchhhhhc---CCCcccccccchhHHHHhhhhcccc-chhhcccccccchhhcccC-CcccCcccccc
Confidence 37789999976433222221 2234555577788889999999997 6799999999999999888 48999998432
Q ss_pred ccCCC--------------------------------CCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhC
Q 012233 289 MLVPG--------------------------------EPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLG 336 (468)
Q Consensus 289 ~~~~~--------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G 336 (468)
...-. .......+|+.|.+||.+.+.. ....+|+|++|++++|.++|
T Consensus 953 ~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~-hgs~ad~~~~g~~l~e~l~g 1031 (1205)
T KOG0606|consen 953 KVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRR-HGSAADWWSSGVCLFEVLTG 1031 (1205)
T ss_pred ccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCccccccc-CCCcchhhhhhhhhhhhhcC
Confidence 22100 0112356799999999998765 78899999999999999999
Q ss_pred CCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHH-
Q 012233 337 QPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTAL- 415 (468)
Q Consensus 337 ~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~- 415 (468)
.+||....+.+...+|... ...+|. -+...+.++++++.++|..+|.+|..+.
T Consensus 1032 ~pp~na~tpq~~f~ni~~~-----------------~~~~p~---------g~~~~s~~aq~~~~~ll~~~~~qr~~a~~ 1085 (1205)
T KOG0606|consen 1032 IPPFNAETPQQIFENILNR-----------------DIPWPE---------GPEEGSYEAQDLINRLLTEEPTQRLGAKG 1085 (1205)
T ss_pred CCCCCCcchhhhhhccccC-----------------CCCCCC---------CccccChhhhhhhhhhhccCchhccCccc
Confidence 9999998887777665541 111221 2345788999999999999999999888
Q ss_pred --HHhCCCCCCCCCCCCCCCCCCCCCCccc
Q 012233 416 --EACAHPFFDDLRDPNTCLPNGRPLPTLF 443 (468)
Q Consensus 416 --ell~hp~f~~~~~~~~~~~~~~~~~~~~ 443 (468)
++..||||+++.-.+..+-+...+|..-
T Consensus 1086 ~~e~k~~~~~~~~~~~~l~~q~~~~~p~~~ 1115 (1205)
T KOG0606|consen 1086 AAEVKGHPFFQDVDWENLALQKAEFVPQPE 1115 (1205)
T ss_pred ccccccCCccCCCCccccccccCccCCCCC
Confidence 8999999999988777776666666554
No 437
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.48 E-value=6.2e-14 Score=130.99 Aligned_cols=242 Identities=18% Similarity=0.202 Sum_probs=158.9
Q ss_pred EEEEEEEcCCCCEEEEEEee----cc----cchHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEEEeeccc-chHH
Q 012233 152 VVFQAKCLETGDSVAIKKVL----QD----KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVLEYIS-ETVY 222 (468)
Q Consensus 152 ~Vy~~~~~~~g~~vaiK~~~----~~----~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv~e~~~-~~ll 222 (468)
.||++.+...|..|.-..+. ++ ....+.-..-|-.+.|-|||+++.++......+...+.+++||+. +.+.
T Consensus 81 ~v~lamd~e~g~evvwneVq~~~rK~~~~qeek~~~vFdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~ 160 (458)
T KOG1266|consen 81 DVYLAMDTEEGVEVVWNEVQFSERKNPKEQEEKRRAVFDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLK 160 (458)
T ss_pred HHHHHhhhccCchhhHHHHHHHHhcChhhCHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHH
Confidence 46777776666665433221 11 111111223355567999999999887666656677889999998 4555
Q ss_pred HHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhc-CCccccCCCCCCeeecCCCCcEEEeeecCccccCCC------CC
Q 012233 223 RVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHV-VGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPG------EP 295 (468)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~-~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~~------~~ 295 (468)
..++...+....+.....++|+.||+.||.|||.. ..|+|+.+...-|++..++ -+|++- +.-....+. ..
T Consensus 161 ~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~PpiihgnlTc~tifiq~ng-LIkig~-~ap~s~h~s~~~~~~~E 238 (458)
T KOG1266|consen 161 QFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPIIHGNLTCDTIFIQHNG-LIKIGS-VAPDSTHPSVNSTREAE 238 (458)
T ss_pred HHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccccCCcchhheeecCCc-eEEecc-cCccccchhhhhhhHhh
Confidence 66666666677788888999999999999999962 3699999999999999777 455532 211111110 01
Q ss_pred CccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCC-CCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCCccC
Q 012233 296 NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPL-FPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEF 374 (468)
Q Consensus 296 ~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~p-f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 374 (468)
.....+-+.|.+||.=. ....+-++|||+||+...+|..|..- -.+.+....-..|...+
T Consensus 239 k~~~~~~~g~~a~~sg~-~tn~~~a~dIy~fgmcAlemailEiq~tnseS~~~~ee~ia~~i------------------ 299 (458)
T KOG1266|consen 239 KSVNTSLPGFSAPESGT-TTNTTGASDIYKFGMCALEMAILEIQSTNSESKVEVEENIANVI------------------ 299 (458)
T ss_pred hhccccCCccccCCcCc-ccccccchhhhhhhHHHHHHHHheeccCCCcceeehhhhhhhhe------------------
Confidence 11234567899999643 23367789999999999999988643 22222222111111110
Q ss_pred CCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCCC
Q 012233 375 KFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRD 428 (468)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~~ 428 (468)
+ ..-.+.-+++|.+||+-.|..||++.+++.||.+-++.-
T Consensus 300 -~-------------~len~lqr~~i~kcl~~eP~~rp~ar~llfHpllfeVhs 339 (458)
T KOG1266|consen 300 -I-------------GLENGLQRGSITKCLEGEPNGRPDARLLLFHPLLFEVHS 339 (458)
T ss_pred -e-------------eccCccccCcCcccccCCCCCCcchhhhhcCceeeecch
Confidence 0 000112347899999999999999999999999877654
No 438
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.39 E-value=5.2e-13 Score=137.94 Aligned_cols=142 Identities=17% Similarity=0.195 Sum_probs=87.7
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeecccc------------------------------------------
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKR------------------------------------------ 175 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~~------------------------------------------ 175 (468)
.|.. +.||+|++|+||+|+.+.+|+.||||++.....
T Consensus 121 ~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ 199 (537)
T PRK04750 121 DFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHD 199 (537)
T ss_pred hcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHH
Confidence 3555 689999999999999987899999998853310
Q ss_pred --hHHHHHHHHHHcC----CCCcccccceeeecCCCCceEEEEEeecccchHHHHHhhhhhcCC---CCCHHHHHHHHHH
Q 012233 176 --YKNRELQIMRLLN----HPNVVSLKHCFFSTTEKDELYLNLVLEYISETVYRVSKHYTRMNQ---HVPILYVQLYTYQ 246 (468)
Q Consensus 176 --~~~~E~~il~~l~----hpnIv~l~~~~~~~~~~~~~~~~lv~e~~~~~ll~~~~~~~~~~~---~~~~~~~~~~~~q 246 (468)
.+.+|...+.++. +.+.+.+-.+|..-. ...+|||||+.|.-+..+......+. .+....+..++.|
T Consensus 200 ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~s----t~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Q 275 (537)
T PRK04750 200 ELDLMREAANASQLRRNFEDSDMLYVPEVYWDYC----SETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQ 275 (537)
T ss_pred hhCHHHHHHHHHHHHHHccCCCCeecceeecccC----CCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHH
Confidence 0012332222221 333333333332111 12459999999875543322111111 1333334444555
Q ss_pred HHHHHHHhHhcCCccccCCCCCCeeecCCC---CcEEEeeecCccccCC
Q 012233 247 ICRALNYLHHVVGVCHRDIKPQNLLVNPHT---HQLKICDFGSAKMLVP 292 (468)
Q Consensus 247 i~~aL~yLH~~~givHrDlkp~NILl~~~~---~~vkL~DFG~a~~~~~ 292 (468)
++ . .|++|+|+||.||+|+.++ .+++++|||++..+..
T Consensus 276 if-------~-~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 276 VF-------R-DGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred HH-------h-CCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 54 4 6999999999999998765 2699999999977644
No 439
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.38 E-value=2.6e-12 Score=131.12 Aligned_cols=138 Identities=21% Similarity=0.256 Sum_probs=89.7
Q ss_pred eceecccCceEEEEEEEcCCCCEEEEEEeeccc-c-------------------------------------------hH
Q 012233 142 ERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK-R-------------------------------------------YK 177 (468)
Q Consensus 142 ~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~-~-------------------------------------------~~ 177 (468)
.+.||.|++|+||+|+. .+|+.||||+..... . .+
T Consensus 122 ~~plasaSigQVh~A~l-~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf 200 (437)
T TIGR01982 122 EKPLAAASIAQVHRARL-VDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDL 200 (437)
T ss_pred CcceeeeehhheEEEEe-cCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCH
Confidence 35799999999999986 479999999874321 0 01
Q ss_pred HHHHHHHHHc----CCCCcccccceeeecCCCCceEEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHH-HHH
Q 012233 178 NRELQIMRLL----NHPNVVSLKHCFFSTTEKDELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICR-ALN 252 (468)
Q Consensus 178 ~~E~~il~~l----~hpnIv~l~~~~~~~~~~~~~~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~-aL~ 252 (468)
.+|...+.++ +|.+-+.+-..|..... ..+|||||+.|..+........ .... ...++.+++. .+.
T Consensus 201 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~----~~vLvmE~i~G~~L~~~~~~~~--~~~~---~~~ia~~~~~~~l~ 271 (437)
T TIGR01982 201 RREAANASELGENFKNDPGVYVPEVYWDRTS----ERVLTMEWIDGIPLSDIAALDE--AGLD---RKALAENLARSFLN 271 (437)
T ss_pred HHHHHHHHHHHHhcCCCCCEEeCCEehhhcC----CceEEEEeECCcccccHHHHHh--cCCC---HHHHHHHHHHHHHH
Confidence 1244444444 23333343344422111 1469999999865543322111 1122 2345555555 467
Q ss_pred HhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccC
Q 012233 253 YLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (468)
Q Consensus 253 yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~ 291 (468)
.+|. .|++|+|+||.||+++.++ .++|+|||++..+.
T Consensus 272 ql~~-~g~~H~D~hPgNilv~~~g-~i~liDfG~~~~l~ 308 (437)
T TIGR01982 272 QVLR-DGFFHADLHPGNIFVLKDG-KIIALDFGIVGRLS 308 (437)
T ss_pred HHHh-CCceeCCCCcccEEECCCC-cEEEEeCCCeeECC
Confidence 8897 8999999999999999887 79999999997664
No 440
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.38 E-value=9.3e-12 Score=127.06 Aligned_cols=180 Identities=22% Similarity=0.256 Sum_probs=125.3
Q ss_pred eEEeceecccCceEEEEEEEcCCCCEEEEEEeecccc----hHHHHHHHHHHcCCCCcccccceeeecCCCCceEEEEEe
Q 012233 139 YMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKR----YKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVL 214 (468)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv~ 214 (468)
|.+ ...+-++.+..-.|..+.++..|.+........ ..++-++-|+.++||||+++++++ .....+|||+
T Consensus 15 Y~l-e~~~~~~~a~~~~~t~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~-----e~~~~~ylvT 88 (690)
T KOG1243|consen 15 YDL-EETAFSSEALWPDGTRKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTT-----EEEGTLYLVT 88 (690)
T ss_pred ccc-ccccCCCcccccccceeccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhh-----cccCceEEEe
Confidence 555 334444444322466677888998887754433 245678889999999999999998 4444699999
Q ss_pred ecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCCCC
Q 012233 215 EYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGE 294 (468)
Q Consensus 215 e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~~~ 294 (468)
|-+..--.. ++. +....+..-+.||+.||.|||+..+++|++|.-..|+|+..| ..||++|.++.......
T Consensus 89 ErV~Pl~~~-lk~-------l~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~G-eWkLggle~v~~~~~~~ 159 (690)
T KOG1243|consen 89 ERVRPLETV-LKE-------LGKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESG-EWKLGGLELVSKASGFN 159 (690)
T ss_pred eccccHHHH-HHH-------hHHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCC-cEEEeeeEEEeccccCC
Confidence 998742111 111 113456667889999999998658999999999999999999 79999999886543222
Q ss_pred C-CccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhC
Q 012233 295 P-NISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLG 336 (468)
Q Consensus 295 ~-~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G 336 (468)
. .....---.|..|+.+.. -.-..|.|-|||++++++.|
T Consensus 160 ~~~~~~~~~~s~~~P~~~~~---s~~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 160 APAKSLYLIESFDDPEEIDP---SEWSIDSWGLGCLIEELFNG 199 (690)
T ss_pred cccccchhhhcccChhhcCc---cccchhhhhHHHHHHHHhCc
Confidence 1 111111223566665422 12457999999999999999
No 441
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.38 E-value=2.2e-12 Score=114.60 Aligned_cols=123 Identities=16% Similarity=0.212 Sum_probs=90.6
Q ss_pred ceecccCceEEEEEEEcCCCCEEEEEEeeccc---chHHHHHHHHHHcCCCCccc-ccceeeecCCCCceEEEEEeeccc
Q 012233 143 RVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK---RYKNRELQIMRLLNHPNVVS-LKHCFFSTTEKDELYLNLVLEYIS 218 (468)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~---~~~~~E~~il~~l~hpnIv~-l~~~~~~~~~~~~~~~~lv~e~~~ 218 (468)
+.|+.|.++.||++.. .+..|++|...... ....+|+.+++.+.+.+++. ++.+. ... .++||||++
T Consensus 4 ~~l~~G~~~~vy~~~~--~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~~~~P~~~~~~-----~~~--~~lv~e~i~ 74 (170)
T cd05151 4 SPLKGGMTNKNYRVEV--ANKKYVVRIPGNGTELLINRENEAENSKLAAEAGIGPKLYYFD-----PET--GVLITEFIE 74 (170)
T ss_pred eecCCcccCceEEEEE--CCeEEEEEeCCCCcccccCHHHHHHHHHHHHHhCCCCceEEEe-----CCC--CeEEEEecC
Confidence 5688999999999987 47899999875543 34578999999987655543 33322 111 358999999
Q ss_pred chHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCc-----cccCCCCCCeeecCCCCcEEEeeecCcc
Q 012233 219 ETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGV-----CHRDIKPQNLLVNPHTHQLKICDFGSAK 288 (468)
Q Consensus 219 ~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~gi-----vHrDlkp~NILl~~~~~~vkL~DFG~a~ 288 (468)
|..+... . .....++.+++.+|..||. .++ +|+|++|.||+++ ++ .++++|||.+.
T Consensus 75 G~~l~~~--------~---~~~~~~~~~l~~~l~~LH~-~~~~~~~~~HgD~~~~Nil~~-~~-~~~liDf~~a~ 135 (170)
T cd05151 75 GSELLTE--------D---FSDPENLEKIAKLLKKLHS-SPLPDLVPCHNDLLPGNFLLD-DG-RLWLIDWEYAG 135 (170)
T ss_pred CCccccc--------c---ccCHHHHHHHHHHHHHHhC-CCCCCceeecCCCCcCcEEEE-CC-eEEEEeccccc
Confidence 8644311 0 0123456799999999997 675 9999999999999 44 69999999875
No 442
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.34 E-value=5.7e-13 Score=134.52 Aligned_cols=249 Identities=20% Similarity=0.177 Sum_probs=175.3
Q ss_pred ccceEEeceecccCceEEEEEEEc-CCCCEEEEEEeecccc------hHHHHHHHHHHc-CCCCcccccceeeecCCCCc
Q 012233 136 TISYMAERVVGTGSFGVVFQAKCL-ETGDSVAIKKVLQDKR------YKNRELQIMRLL-NHPNVVSLKHCFFSTTEKDE 207 (468)
Q Consensus 136 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~g~~vaiK~~~~~~~------~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~~ 207 (468)
..+|..+..||.|.|+.|+.+... .++..|++|-..+... .-..|+.+...+ .|.+++..+..+.. .
T Consensus 264 ~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~-----~ 338 (524)
T KOG0601|consen 264 LTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQ-----L 338 (524)
T ss_pred cCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccc-----c
Confidence 456888999999999999998755 6788899986644322 222466665555 48888887766632 2
Q ss_pred eEEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCc
Q 012233 208 LYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSA 287 (468)
Q Consensus 208 ~~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a 287 (468)
...||-.|||.++...+.. .....+.+...+++..|++.++.++|+ ..++|+|+||+||++..++...++.|||++
T Consensus 339 r~~~ip~e~~~~~s~~l~~---~~~~~~d~~~~~~~~~q~~~~l~~i~s-~~~~~~d~~psni~i~~~~~~~~~~~~~~~ 414 (524)
T KOG0601|consen 339 RQGYIPLEFCEGGSSSLRS---VTSQMLDEDPRLRLTAQILTALNVIHS-KLFVHLDVKPSNILISNDGFFSKLGDFGCW 414 (524)
T ss_pred ccccCchhhhcCcchhhhh---HHHHhcCcchhhhhHHHHHhccccccc-hhhhcccccccceeeccchhhhhccccccc
Confidence 2356889999876655433 334556777788999999999999997 899999999999999876447899999998
Q ss_pred cccCCCCCCccccccCCcc-ccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhh
Q 012233 288 KMLVPGEPNISYICSRYYR-APELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKC 366 (468)
Q Consensus 288 ~~~~~~~~~~~~~gt~~y~-aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 366 (468)
+.+. -........-++. ..|++.....+..+.|++|||.-+++.++|.+.-........ |..
T Consensus 415 t~~~--~~~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~~~~---i~~------------ 477 (524)
T KOG0601|consen 415 TRLA--FSSGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQSLT---IRS------------ 477 (524)
T ss_pred cccc--eecccccccccccccchhhccccccccccccccccccccccccCcccCccccccee---eec------------
Confidence 6421 1112233334444 366666666689999999999999999998744322211110 000
Q ss_pred cCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCC
Q 012233 367 MNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLR 427 (468)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~ 427 (468)
-..+. ......++..+.+.++..++..|+.+.++..|+=|....
T Consensus 478 -------~~~p~----------~~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~~~~ 521 (524)
T KOG0601|consen 478 -------GDTPN----------LPGLKLQLQVLLKVMINPDRKRRPSAVELSLHSEFYRDS 521 (524)
T ss_pred -------ccccC----------CCchHHhhhhhhhhhcCCccccchhhhhhcccchhhhhc
Confidence 00010 112336788899999999999999999999988776543
No 443
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.30 E-value=1.5e-11 Score=110.88 Aligned_cols=133 Identities=18% Similarity=0.192 Sum_probs=91.8
Q ss_pred ceecccCceEEEEEEEcC------CCCEEEEEEeec--------------ccc------------hH----HHHHHHHHH
Q 012233 143 RVVGTGSFGVVFQAKCLE------TGDSVAIKKVLQ--------------DKR------------YK----NRELQIMRL 186 (468)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~------~g~~vaiK~~~~--------------~~~------------~~----~~E~~il~~ 186 (468)
-.||.|--+.||.|.... .+..+|||+.+. +.+ .. ++|...|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 368999999999998643 357899997621 100 11 268888888
Q ss_pred cCC--CCcccccceeeecCCCCceEEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHh-HhcCCcccc
Q 012233 187 LNH--PNVVSLKHCFFSTTEKDELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYL-HHVVGVCHR 263 (468)
Q Consensus 187 l~h--pnIv~l~~~~~~~~~~~~~~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yL-H~~~givHr 263 (468)
+.. -++.+++++. . -+|||||++++.+.... . ....++...+..+..|++.+|..| |+ .||||+
T Consensus 83 l~~~Gv~vP~pi~~~-----~----~~lvME~Ig~~~~~~~~--L-kd~~~~~~~~~~i~~~i~~~l~~l~H~-~glVHG 149 (197)
T cd05146 83 MQKAGIPCPEVVVLK-----K----HVLVMSFIGDDQVPAPK--L-KDAKLNDEEMKNAYYQVLSMMKQLYKE-CNLVHA 149 (197)
T ss_pred HHHcCCCCCeEEEec-----C----CEEEEEEcCCCCccchh--h-hccccCHHHHHHHHHHHHHHHHHHHHh-CCeecC
Confidence 863 3455554431 1 45899999874221000 0 012244455667788999999999 87 899999
Q ss_pred CCCCCCeeecCCCCcEEEeeecCcccc
Q 012233 264 DIKPQNLLVNPHTHQLKICDFGSAKML 290 (468)
Q Consensus 264 Dlkp~NILl~~~~~~vkL~DFG~a~~~ 290 (468)
||++.|||++. + .+.|+|||.+...
T Consensus 150 DLs~~NIL~~~-~-~v~iIDF~qav~~ 174 (197)
T cd05146 150 DLSEYNMLWHD-G-KVWFIDVSQSVEP 174 (197)
T ss_pred CCCHHHEEEEC-C-cEEEEECCCceeC
Confidence 99999999984 4 6999999988644
No 444
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=99.26 E-value=2.1e-10 Score=113.78 Aligned_cols=214 Identities=19% Similarity=0.243 Sum_probs=154.5
Q ss_pred ceEEEEEEEcCCCCEEEEEEeecccch----HHHHHHHHHHcCCCCcccccceeeecCCCCceEEEEEeecccc--hHHH
Q 012233 150 FGVVFQAKCLETGDSVAIKKVLQDKRY----KNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVLEYISE--TVYR 223 (468)
Q Consensus 150 fg~Vy~~~~~~~g~~vaiK~~~~~~~~----~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv~e~~~~--~ll~ 223 (468)
-.+.|+|....+|..|.+|.+..++.. ...-+++++++.|+|||++..+|.+.. .+..-+++|++|.++ +|++
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~t-F~D~SlvlvYDYyP~s~TL~d 367 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYT-FGDLSLVLVYDYYPSSPTLYD 367 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhc-cCcceEEEEEecCCCCchHHH
Confidence 356799999999999999998433322 224688999999999999999987444 556668899999984 5555
Q ss_pred HHhhh-----------hhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCC
Q 012233 224 VSKHY-----------TRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP 292 (468)
Q Consensus 224 ~~~~~-----------~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~ 292 (468)
+.-.. ...+...++..+|.|+.||..||.++|+ .|...+-|.|.+||++.+. +++|...|....+..
T Consensus 368 ~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHs-sGLAck~L~~~kIlv~G~~-RIriS~C~i~Dvl~~ 445 (655)
T KOG3741|consen 368 LYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHS-SGLACKTLDLKKILVTGKM-RIRISGCGIMDVLQE 445 (655)
T ss_pred HHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHh-cCceeecccHhHeEeeCcc-eEEEecccceeeecC
Confidence 43211 1223557889999999999999999998 8999999999999999887 799998888765543
Q ss_pred CCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCC-CCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCC
Q 012233 293 GEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPL-FPGESGVDQLVEIIKILGTPTREEIKCMNPNY 371 (468)
Q Consensus 293 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~p-f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 371 (468)
+. . |.+. --.+-|.=.||.+++.|.||..- +..........+.
T Consensus 446 d~-----------~--~~le----~~Qq~D~~~lG~ll~aLAt~~~ns~~~d~~~~s~~~~------------------- 489 (655)
T KOG3741|consen 446 DP-----------T--EPLE----SQQQNDLRDLGLLLLALATGTENSNRTDSTQSSHLTR------------------- 489 (655)
T ss_pred CC-----------C--cchh----HHhhhhHHHHHHHHHHHhhcccccccccchHHHHHHH-------------------
Confidence 33 0 1121 22356999999999999999532 1111111111111
Q ss_pred ccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 372 TEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
+...++.+++++|.-+...++++ -++.+++.
T Consensus 490 ----------------I~~~yS~D~rn~v~yl~s~~~~~-ksI~~llp 520 (655)
T KOG3741|consen 490 ----------------ITTTYSTDLRNVVEYLESLNFRE-KSIQDLLP 520 (655)
T ss_pred ----------------hhhhhhHHHHHHHHHHHhcCccc-ccHHHHHH
Confidence 22347888999999999888886 56666654
No 445
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.20 E-value=1.3e-11 Score=126.47 Aligned_cols=159 Identities=21% Similarity=0.330 Sum_probs=116.9
Q ss_pred HHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCCCCC--------Ccc--ccccCCccccccccCCC
Q 012233 246 QICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGEP--------NIS--YICSRYYRAPELIFGAT 315 (468)
Q Consensus 246 qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~~~~--------~~~--~~gt~~y~aPE~~~~~~ 315 (468)
+++.||.|+|+..++||+.|.|++|.++..+ ..||+.|+++....+... ... ..-...|.|||.+.+ .
T Consensus 107 ~v~dgl~flh~sAk~VH~ni~p~~i~~na~~-~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~-~ 184 (700)
T KOG2137|consen 107 NVADGLAFLHRSAKVVHGNIQPEAIVVNANG-DWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG-T 184 (700)
T ss_pred cccchhhhhccCcceeecccchhheeeccCc-ceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc-c
Confidence 3448999999878999999999999999888 799999999865433111 111 122567999999976 4
Q ss_pred CCCcchhHHHHHHHHHHHH-hCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCCccCCCCcccCCCcccccccCCCH
Q 012233 316 EYTTAIDMWSIGCVLAELL-LGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPP 394 (468)
Q Consensus 316 ~~~~~~DvwSlG~il~ell-~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (468)
..+.++|+||+||++|.+. .|+..+........+..-....+. . ...+...++.
T Consensus 185 ~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~~~~~-------------~------------~~~~s~~~p~ 239 (700)
T KOG2137|consen 185 TNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRNLLNA-------------G------------AFGYSNNLPS 239 (700)
T ss_pred cccccccceeeeeEEEEEecCCcchhhccCCcchhhhhhccccc-------------c------------cccccccCcH
Confidence 4899999999999999998 677666554433322221111000 0 0113357899
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCCCCCC
Q 012233 395 EALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNT 431 (468)
Q Consensus 395 ~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~~~~~ 431 (468)
++++=+.++|..++..||++.+++..|||.+..-...
T Consensus 240 el~~~l~k~l~~~~~~rp~~~~l~~~~ff~D~~~~aL 276 (700)
T KOG2137|consen 240 ELRESLKKLLNGDSAVRPTLDLLLSIPFFSDPGLKAL 276 (700)
T ss_pred HHHHHHHHHhcCCcccCcchhhhhcccccCCchhhhh
Confidence 9999999999999999999999999999998655443
No 446
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=99.14 E-value=1.7e-09 Score=105.03 Aligned_cols=255 Identities=16% Similarity=0.207 Sum_probs=155.7
Q ss_pred EeceecccCceEEEEEEEcCCCCEEEEEEeecccchH-HHHHHHHHHc-CCCCcccccce----eeecCCCCceEEEEEe
Q 012233 141 AERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRYK-NRELQIMRLL-NHPNVVSLKHC----FFSTTEKDELYLNLVL 214 (468)
Q Consensus 141 ~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~~~~-~~E~~il~~l-~hpnIv~l~~~----~~~~~~~~~~~~~lv~ 214 (468)
..+.||+|+-+.+|-.-. -+..|| |++....-.. .+.+..|... .||-+-.-+.+ .+.. .....+.+.|
T Consensus 15 ~gr~LgqGgea~ly~l~e--~~d~VA-KIYh~Pppa~~aqk~a~la~~p~~p~~~~rvaWPqa~L~G~--~~~~~iGflm 89 (637)
T COG4248 15 PGRPLGQGGEADLYTLGE--VRDQVA-KIYHAPPPAAQAQKVAELAATPDAPLLNYRVAWPQATLHGG--RRGKVIGFLM 89 (637)
T ss_pred CCccccCCccceeeecch--hhchhh-eeecCCCchHHHHHHHHhccCCCCcchhhhhcccHHHhhCC--CccceeEEec
Confidence 346799999999987643 334444 7775543222 1223333322 35543320111 1111 2222366788
Q ss_pred ecccch--HHHHHhh--hhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCcccc
Q 012233 215 EYISET--VYRVSKH--YTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (468)
Q Consensus 215 e~~~~~--ll~~~~~--~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~ 290 (468)
..+++. ...+..- ....-..+.+..+.+.++.|+.+.+-||. .|.+-+|+.++|+||..++ .|.|.|=..-...
T Consensus 90 P~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~-~Gh~vGDVn~~~~lVsd~~-~V~LVdsDsfqi~ 167 (637)
T COG4248 90 PKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHE-HGHVVGDVNQNSFLVSDDS-KVVLVDSDSFQIN 167 (637)
T ss_pred ccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHh-cCCcccccCccceeeecCc-eEEEEcccceeec
Confidence 888753 2222211 12223446788899999999999999998 8999999999999999887 7899876655444
Q ss_pred CCCCCCccccccCCcccccccc----CCCCCCcchhHHHHHHHHHHHHhC-CCCCCCCCcHHHHHHHHHHhCCCCHHHHh
Q 012233 291 VPGEPNISYICSRYYRAPELIF----GATEYTTAIDMWSIGCVLAELLLG-QPLFPGESGVDQLVEIIKILGTPTREEIK 365 (468)
Q Consensus 291 ~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~~~DvwSlG~il~ell~G-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 365 (468)
..+......+|.+.|.+||.-. ....-+...|.|.||+++|++|.| ++||.+... ....|..-+..
T Consensus 168 ~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~---------~~~ap~p~E~~ 238 (637)
T COG4248 168 ANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPL---------ISDAPNPLETD 238 (637)
T ss_pred cCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccc---------cCCCCCcchhh
Confidence 4555566678899999999753 112356789999999999999986 999987321 01111111100
Q ss_pred hcCCCC------ccCCCCcccCCCcccccccCCCHHHHHHHHHhccc--CCCCCCCHHH
Q 012233 366 CMNPNY------TEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQY--SPSLRCTALE 416 (468)
Q Consensus 366 ~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~--dP~~R~s~~e 416 (468)
...-.| ..-..|.....+| .-+++++..|..+|+.. ++.-|||++.
T Consensus 239 Ia~g~f~ya~~~~~g~~p~P~~~P~-----~~Lpp~vqAlF~qaF~~~~~~~~RP~a~a 292 (637)
T COG4248 239 IAHGRFAYASDQRRGLKPPPRSIPL-----SMLPPDVQALFQQAFTESGVATPRPTAKA 292 (637)
T ss_pred hhcceeeechhccCCCCCCCCCCCh-----hhcCHHHHHHHHHHhcccCCCCCCCCHHH
Confidence 000000 1111111222222 34789999999999976 5678999763
No 447
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.14 E-value=4.9e-10 Score=97.50 Aligned_cols=139 Identities=17% Similarity=0.245 Sum_probs=94.1
Q ss_pred EeceecccCceEEEEEEEcCCCCEEEEEEeec-c-----------cchHHHHHHHHHHcCCCCcccccceeeecCCCCce
Q 012233 141 AERVVGTGSFGVVFQAKCLETGDSVAIKKVLQ-D-----------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDEL 208 (468)
Q Consensus 141 ~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~-~-----------~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 208 (468)
...+|-+|+-+.|+++.+ .|+.+.||.-.. . .....+|..+|.++.--.|.-..-+|....
T Consensus 11 ~l~likQGAEArv~~~~~--~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~----- 83 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF--SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTY----- 83 (229)
T ss_pred cceeeeccceeeEeeecc--CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecC-----
Confidence 345788999999999988 889988885321 1 122346888888886433322222222211
Q ss_pred EEEEEeecccc--hHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcE--EEeee
Q 012233 209 YLNLVLEYISE--TVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQL--KICDF 284 (468)
Q Consensus 209 ~~~lv~e~~~~--~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~v--kL~DF 284 (468)
.-+|+|||+.| .+.+.+.... ...........++.+|-..+.-||. .+|||+||..+||+|.+++.++ .|+||
T Consensus 84 ~~~i~ME~~~g~~~vk~~i~~~~--~~~~~d~~~~~~~~~iG~~igklH~-ndiiHGDLTTSNill~~~~~~~~~~lIdf 160 (229)
T KOG3087|consen 84 GGQIYMEFIDGASTVKDFILSTM--EDESEDEGLAELARRIGELIGKLHD-NDIIHGDLTTSNILLRSDGNQITPILIDF 160 (229)
T ss_pred CCeEEEEeccchhHHHHHHHHHc--cCcccchhHHHHHHHHHHHHHHhhh-CCeecccccccceEEecCCCcCceEEEee
Confidence 14589999998 4444333222 1222222236788889999999998 8999999999999998777654 89999
Q ss_pred cCccc
Q 012233 285 GSAKM 289 (468)
Q Consensus 285 G~a~~ 289 (468)
|++..
T Consensus 161 gls~~ 165 (229)
T KOG3087|consen 161 GLSSV 165 (229)
T ss_pred cchhc
Confidence 99854
No 448
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.09 E-value=1.3e-09 Score=95.37 Aligned_cols=127 Identities=17% Similarity=0.285 Sum_probs=85.5
Q ss_pred ceecccCceEEEEEEEcCCCCEEEEEEee-cc-----------cchHHHHHHHHHHcCCCCcccccceeeecCCCCceEE
Q 012233 143 RVVGTGSFGVVFQAKCLETGDSVAIKKVL-QD-----------KRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYL 210 (468)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~-~~-----------~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~ 210 (468)
..+++|+-+.+|.+.+ -|..+.+|.-. +. .....+|..++.++.--.|...+-+++... ..
T Consensus 2 ~~i~~GAEa~i~~~~~--~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~-----~~ 74 (204)
T COG3642 2 DLIKQGAEAIIYLTDF--LGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPD-----NG 74 (204)
T ss_pred chhhCCcceeEEeeec--cCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCC-----CC
Confidence 3578999999999977 45557777432 11 111236999988886443332222222221 24
Q ss_pred EEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccc
Q 012233 211 NLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (468)
Q Consensus 211 ~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~ 289 (468)
.|+|||++|.++....... . ..++..+=.-+.-||. .||||+||.++||++..++ +.++|||++..
T Consensus 75 ~I~me~I~G~~lkd~l~~~------~----~~~~r~vG~~vg~lH~-~givHGDLTtsNiIl~~~~--i~~IDfGLg~~ 140 (204)
T COG3642 75 LIVMEYIEGELLKDALEEA------R----PDLLREVGRLVGKLHK-AGIVHGDLTTSNIILSGGR--IYFIDFGLGEF 140 (204)
T ss_pred EEEEEEeCChhHHHHHHhc------c----hHHHHHHHHHHHHHHh-cCeecCCCccceEEEeCCc--EEEEECCcccc
Confidence 5899999998776322211 1 3345566677788998 8999999999999999664 99999999864
No 449
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.01 E-value=2.3e-09 Score=99.34 Aligned_cols=140 Identities=16% Similarity=0.190 Sum_probs=94.5
Q ss_pred ceecccCceEEEEEEEcCCCCEEEEEEeecc-----cchHHHHHHHHHHcCCCC--cccccceeeecCCCCceEEEEEee
Q 012233 143 RVVGTGSFGVVFQAKCLETGDSVAIKKVLQD-----KRYKNRELQIMRLLNHPN--VVSLKHCFFSTTEKDELYLNLVLE 215 (468)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~-----~~~~~~E~~il~~l~hpn--Iv~l~~~~~~~~~~~~~~~~lv~e 215 (468)
+.|+.|.++.||++... +|+.+++|..... .....+|+.+++.+.+.+ +.+++.+..... .....++|||
T Consensus 4 ~~l~~G~~n~~~~v~~~-~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~--~~~~~~~v~e 80 (223)
T cd05154 4 RQLSGGQSNLTYLLTAG-GGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPS--VLGTPFYVME 80 (223)
T ss_pred eecCCCccceEEEEEec-CCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCC--ccCCceEEEE
Confidence 46899999999999863 3688999987543 345678999999997643 455555432111 0123579999
Q ss_pred cccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHh---------------------------------------
Q 012233 216 YISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHH--------------------------------------- 256 (468)
Q Consensus 216 ~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~--------------------------------------- 256 (468)
|++|..+..... ...++......++.+++.+|.+||+
T Consensus 81 ~i~G~~l~~~~~----~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (223)
T cd05154 81 RVDGRVLRDRLL----RPELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPA 156 (223)
T ss_pred EeCCEecCCCCC----CCCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHH
Confidence 999864431110 0234555555666666666666663
Q ss_pred ----------------cCCccccCCCCCCeeecCC-CCcEEEeeecCccc
Q 012233 257 ----------------VVGVCHRDIKPQNLLVNPH-THQLKICDFGSAKM 289 (468)
Q Consensus 257 ----------------~~givHrDlkp~NILl~~~-~~~vkL~DFG~a~~ 289 (468)
...++|+|++|.|||++.+ ...+.|+||+.+..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 157 MERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 1347999999999999983 22588999998853
No 450
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.94 E-value=3.8e-09 Score=94.94 Aligned_cols=121 Identities=23% Similarity=0.288 Sum_probs=75.7
Q ss_pred EEEEEEEcCCCCEEEEEEeeccc------------------------------chHHHHHHHHHHcCCC--Cccccccee
Q 012233 152 VVFQAKCLETGDSVAIKKVLQDK------------------------------RYKNRELQIMRLLNHP--NVVSLKHCF 199 (468)
Q Consensus 152 ~Vy~~~~~~~g~~vaiK~~~~~~------------------------------~~~~~E~~il~~l~hp--nIv~l~~~~ 199 (468)
.||.|.. .+|..+|+|+..... ....+|.+.|.++..- ++.+++.+.
T Consensus 1 ~Vy~~~~-~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~ 79 (188)
T PF01163_consen 1 DVYHAID-PDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN 79 (188)
T ss_dssp EEEEEEE-CTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE
T ss_pred CEEEEEC-CCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe
Confidence 4899986 467899999763210 1123699999999865 455554432
Q ss_pred eecCCCCceEEEEEeeccc--chHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHH-hHhcCCccccCCCCCCeeecCCC
Q 012233 200 FSTTEKDELYLNLVLEYIS--ETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNY-LHHVVGVCHRDIKPQNLLVNPHT 276 (468)
Q Consensus 200 ~~~~~~~~~~~~lv~e~~~--~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~y-LH~~~givHrDlkp~NILl~~~~ 276 (468)
. -+|||||++ |..+..+.... +.......++.+++..+.. +|. .||+|+||.+.|||++.+
T Consensus 80 -----~----~~ivME~I~~~G~~~~~l~~~~-----~~~~~~~~~~~~il~~~~~~~~~-~givHGDLs~~NIlv~~~- 143 (188)
T PF01163_consen 80 -----R----NVIVMEYIGEDGVPLPRLKDVD-----LSPEEPKELLEEILEEIIKMLHK-AGIVHGDLSEYNILVDDG- 143 (188)
T ss_dssp -----T----TEEEEE--EETTEEGGCHHHCG-----GGGSTHHHHHHHHHHHHHHHHHC-TTEEESS-STTSEEEETT-
T ss_pred -----C----CEEEEEecCCCccchhhHHhcc-----ccchhHHHHHHHHHHHHHHHHHh-cCceecCCChhhEEeecc-
Confidence 2 248999999 64333222211 1122355667788885555 577 899999999999999966
Q ss_pred CcEEEeeecCcccc
Q 012233 277 HQLKICDFGSAKML 290 (468)
Q Consensus 277 ~~vkL~DFG~a~~~ 290 (468)
.+.|+|||.+...
T Consensus 144 -~~~iIDf~qav~~ 156 (188)
T PF01163_consen 144 -KVYIIDFGQAVDS 156 (188)
T ss_dssp -CEEE--GTTEEET
T ss_pred -eEEEEecCcceec
Confidence 5999999998644
No 451
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.92 E-value=3.2e-08 Score=94.27 Aligned_cols=133 Identities=14% Similarity=0.121 Sum_probs=87.1
Q ss_pred eEEEEEEEcCCCCEEEEEEeeccc---------------chHHHHHHHHHHcCCCCcccc--cceeeecCCCCceEEEEE
Q 012233 151 GVVFQAKCLETGDSVAIKKVLQDK---------------RYKNRELQIMRLLNHPNVVSL--KHCFFSTTEKDELYLNLV 213 (468)
Q Consensus 151 g~Vy~~~~~~~g~~vaiK~~~~~~---------------~~~~~E~~il~~l~hpnIv~l--~~~~~~~~~~~~~~~~lv 213 (468)
..|++... .|+.|.||...... ....+|...+..|..-+|... +.++..........-+||
T Consensus 36 rrvvr~~~--~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LV 113 (268)
T PRK15123 36 RRTLRFEL--AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFII 113 (268)
T ss_pred ceEEEEEE--CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEE
Confidence 34555544 56778888552211 135678888888854443333 333322111112346799
Q ss_pred eecccch--HHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCC------CCcEEEeeec
Q 012233 214 LEYISET--VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPH------THQLKICDFG 285 (468)
Q Consensus 214 ~e~~~~~--ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~------~~~vkL~DFG 285 (468)
||++++. +.+++.... ....+......++.+++..+.-||. .||+|+||++.|||++.+ ...+.|+||+
T Consensus 114 te~l~~~~sL~~~~~~~~--~~~~~~~~~~~ll~~la~~i~~LH~-~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~ 190 (268)
T PRK15123 114 TEDLAPTISLEDYCADWA--TNPPDPRLKRMLIKRVATMVRDMHA-AGINHRDCYICHFLLHLPFPGREEDLKLSVIDLH 190 (268)
T ss_pred EeeCCCCccHHHHHHhhc--ccCCCHHHHHHHHHHHHHHHHHHHH-CcCccCCCChhhEEEeccccCCCCCceEEEEECC
Confidence 9999974 444432221 2344566677899999999999998 899999999999999852 2379999999
Q ss_pred Ccc
Q 012233 286 SAK 288 (468)
Q Consensus 286 ~a~ 288 (468)
.+.
T Consensus 191 r~~ 193 (268)
T PRK15123 191 RAQ 193 (268)
T ss_pred ccc
Confidence 875
No 452
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.82 E-value=1.5e-08 Score=93.96 Aligned_cols=131 Identities=19% Similarity=0.167 Sum_probs=90.4
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeecc--------------------------cchHHHHHHHHHHcCCC-
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD--------------------------KRYKNRELQIMRLLNHP- 190 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~--------------------------~~~~~~E~~il~~l~hp- 190 (468)
-+.++..||-|--+.||.|.+. .|..+|||.-... ....++|.++|.+|...
T Consensus 92 ve~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G 170 (304)
T COG0478 92 VEAIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEG 170 (304)
T ss_pred HHhhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcC
Confidence 3667789999999999999964 7899999953110 12235799999999755
Q ss_pred -CcccccceeeecCCCCceEEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCC
Q 012233 191 -NVVSLKHCFFSTTEKDELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQN 269 (468)
Q Consensus 191 -nIv~l~~~~~~~~~~~~~~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~N 269 (468)
.|.+.+++- .-++||||+.|-.+..... .......++..|+.-+.-+-. .||||+|+.+-|
T Consensus 171 ~~VP~P~~~n---------RHaVvMe~ieG~eL~~~r~--------~~en~~~il~~il~~~~~~~~-~GiVHGDlSefN 232 (304)
T COG0478 171 VKVPKPIAWN---------RHAVVMEYIEGVELYRLRL--------DVENPDEILDKILEEVRKAYR-RGIVHGDLSEFN 232 (304)
T ss_pred CCCCCccccc---------cceeeeehcccceeecccC--------cccCHHHHHHHHHHHHHHHHH-cCccccCCchhe
Confidence 566554432 2458999999864432211 122233344444444444435 799999999999
Q ss_pred eeecCCCCcEEEeeecCcc
Q 012233 270 LLVNPHTHQLKICDFGSAK 288 (468)
Q Consensus 270 ILl~~~~~~vkL~DFG~a~ 288 (468)
|||+.++ .+.++||--+.
T Consensus 233 IlV~~dg-~~~vIDwPQ~v 250 (304)
T COG0478 233 ILVTEDG-DIVVIDWPQAV 250 (304)
T ss_pred EEEecCC-CEEEEeCcccc
Confidence 9999998 69999997654
No 453
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.74 E-value=2.1e-09 Score=109.27 Aligned_cols=253 Identities=19% Similarity=0.165 Sum_probs=168.4
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeecccchHHHHHHHHHHcCCCC-cccccceeeecCCCCceEEEEEeec
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRYKNRELQIMRLLNHPN-VVSLKHCFFSTTEKDELYLNLVLEY 216 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~~~~~~E~~il~~l~hpn-Iv~l~~~~~~~~~~~~~~~~lv~e~ 216 (468)
.|...+-+++|+++++++.+...+...+ .+.+... ....-++++|.+++||| .+..++-+ ..+.+..+++++
T Consensus 243 ws~~fh~fvK~altknpKkRptaeklL~-h~fvs~~-l~~rl~~eLLdK~n~P~~~v~~~~d~-----~~E~~~~i~~~i 315 (829)
T KOG0576|consen 243 WSEFFHNFVKGALTKNPKKRPTAEKLLQ-HPFVSQT-LSRRLAIELLDKVNNPNPVVRYLEDY-----DGEDYLWIPMRI 315 (829)
T ss_pred chHHHHHHHHHHhcCCCccCCChhhhee-ceeeccc-hhhHHHHHHHHHccCCCCcccccccC-----Ccccccchhhhh
Confidence 4677788999999999999876655444 6665544 33445899999999999 44443333 666788999999
Q ss_pred ccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCCCCCC
Q 012233 217 ISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGEPN 296 (468)
Q Consensus 217 ~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~~~~~ 296 (468)
++++--.. .........+..-....+.+.-+++|++||+ .-=+|+| ||+..+. ..++.||+....+......
T Consensus 316 ~s~~rs~~-~~~~~se~~~~~~~~~~~~r~et~~l~~l~~-~~~~~~d----~~l~s~~--~~~~~~~~v~~~L~~~~~~ 387 (829)
T KOG0576|consen 316 CSTGRSSA-LEMTVSEIALEQYQFAYPLRKETRPLAELHS-SYKVHRD----NILGSEE--EVKLLDFAVPPQLTRTMKP 387 (829)
T ss_pred hcCCcccc-ccCChhhHhhhhhhhhhhhhhhccccccccc-ccccCcc----ccccccc--ccccccccCCcccCccccc
Confidence 98761000 0000001111112233344555778999997 4458888 8888864 5899999998877666566
Q ss_pred ccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCCccCCC
Q 012233 297 ISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKF 376 (468)
Q Consensus 297 ~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 376 (468)
....+++.++|||+..... +....|+|++|+--.+|--|-+|-.... .....+ . .....
T Consensus 388 ~t~~~~~~~~~pev~~~~~-~~~~p~~~~~~~~~~~~ap~~pPr~~P~--~~~~~~---------------g---~~p~s 446 (829)
T KOG0576|consen 388 RTAIGTPEPLAPEVIQENT-IDGCPDSGSLAVSAIQMAPGLPPRSSPP--AVLPMI---------------G---NGPNS 446 (829)
T ss_pred ccCCCCCCCCCchhhcccc-cccCCCccCCCcchhhcCCCCCCCCCCc--cccCCC---------------C---CCCCc
Confidence 7889999999999987655 8889999999987777777877754411 000000 0 00000
Q ss_pred CcccC-CCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhCCCCCCCCCCCCCCC
Q 012233 377 PQIKA-HPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNTCL 433 (468)
Q Consensus 377 ~~~~~-~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~hp~f~~~~~~~~~~ 433 (468)
+.+.. ..|...++. ++...|+..-|..|+....++-|.+|...+....|.
T Consensus 447 ~~L~~~~aw~~~~~~-------~~~~~~~~g~P~~pkv~mgacfsKvfngCpl~i~~a 497 (829)
T KOG0576|consen 447 PMLTDKSAWSPVFHR-------DFPAPCLNGLPPTPKVHMGACFSKVFNGCPLRIHCA 497 (829)
T ss_pred cccchhhhcCccccc-------CCcccccCCCCCCCcchhhHHHHHHhccCcccceec
Confidence 11101 222222211 677899999999999999999999999987766653
No 454
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.58 E-value=6.9e-07 Score=82.10 Aligned_cols=107 Identities=16% Similarity=0.253 Sum_probs=74.1
Q ss_pred HHHHHHHHHHcCCCC--cccccceeeecCCCCceEEEEEeecccch--HHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHH
Q 012233 177 KNRELQIMRLLNHPN--VVSLKHCFFSTTEKDELYLNLVLEYISET--VYRVSKHYTRMNQHVPILYVQLYTYQICRALN 252 (468)
Q Consensus 177 ~~~E~~il~~l~hpn--Iv~l~~~~~~~~~~~~~~~~lv~e~~~~~--ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~ 252 (468)
..+|...+..|..-. +.+.+.+....... ....+||+|++++. +...+... ...+......++.+++..+.
T Consensus 58 a~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~-~~~s~lite~l~~~~~L~~~~~~~----~~~~~~~~~~ll~~l~~~i~ 132 (206)
T PF06293_consen 58 AKREWRNLQRLREAGIPTPEPVAYGERRKGG-GYRSYLITEALPGAQDLRDLLQQW----EQLDPSQRRELLRALARLIA 132 (206)
T ss_pred HHHHHHHHHHHHHcCCCCCcEEEEEEEcCCC-ceeEEEEEEeCCCcccHHHHHHhh----cccchhhHHHHHHHHHHHHH
Confidence 456888777775333 33344444332222 24467999999873 33333221 11455667788999999999
Q ss_pred HhHhcCCccccCCCCCCeeecCCC--CcEEEeeecCccc
Q 012233 253 YLHHVVGVCHRDIKPQNLLVNPHT--HQLKICDFGSAKM 289 (468)
Q Consensus 253 yLH~~~givHrDlkp~NILl~~~~--~~vkL~DFG~a~~ 289 (468)
-||. .||+|+|+++.|||++.+. ..+.|+||+.++.
T Consensus 133 ~lH~-~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 133 KLHD-AGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred HHHH-CcCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 9998 8999999999999998764 2589999998764
No 455
>PRK09902 hypothetical protein; Provisional
Probab=98.55 E-value=2.4e-06 Score=77.47 Aligned_cols=139 Identities=13% Similarity=0.077 Sum_probs=94.1
Q ss_pred ecccCceEEEEEEEcCCCCEEEEEEee----------cccchHHHHHHHHHHcCCCC--cccccceeeecCCCCceEEEE
Q 012233 145 VGTGSFGVVFQAKCLETGDSVAIKKVL----------QDKRYKNRELQIMRLLNHPN--VVSLKHCFFSTTEKDELYLNL 212 (468)
Q Consensus 145 lG~G~fg~Vy~~~~~~~g~~vaiK~~~----------~~~~~~~~E~~il~~l~hpn--Iv~l~~~~~~~~~~~~~~~~l 212 (468)
-|+||.+-|+.... .|..+-+|.-. .....+.+|...++.|..-+ +.++. ++-.........-+|
T Consensus 26 ~~rgG~SgV~r~~~--~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~L 102 (216)
T PRK09902 26 YRRNGMSGVQCVER--NGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALL 102 (216)
T ss_pred cCCCCcceEEEEEe--CCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEE
Confidence 35688888888765 45567788542 12345568999988886433 44444 222122233445779
Q ss_pred Eeecccc--hHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCC-cEEEeeecCccc
Q 012233 213 VLEYISE--TVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTH-QLKICDFGSAKM 289 (468)
Q Consensus 213 v~e~~~~--~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~-~vkL~DFG~a~~ 289 (468)
|+|-+++ ++.+.+... .-...+......++.+|+..|.-||. .|+.|+|+-+.|||++.++. .++++||.-++.
T Consensus 103 VTe~L~g~~~L~~~l~~~--~~~~~~~~~k~~il~~va~~ia~LH~-~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 103 VTEDMAGFISIADWYAQH--AVSPYSDEVRQAMLKAVALAFKKMHS-VNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR 179 (216)
T ss_pred EEEeCCCCccHHHHHhcC--CcCCcchHHHHHHHHHHHHHHHHHHH-CCCcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence 9998884 443333221 12234566667899999999999998 89999999999999986552 499999987754
No 456
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.53 E-value=2e-07 Score=96.19 Aligned_cols=138 Identities=22% Similarity=0.246 Sum_probs=83.0
Q ss_pred ceecccCceEEEEEEEcCCCCEEEEEEeeccc--------------------------------------------chHH
Q 012233 143 RVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK--------------------------------------------RYKN 178 (468)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~--------------------------------------------~~~~ 178 (468)
..|+.++-|+||.|..+ +|+.||||+..-.. ....
T Consensus 131 ~PiAsASIaQVH~A~L~-sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~ 209 (517)
T COG0661 131 EPIASASIAQVHRAVLK-SGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYR 209 (517)
T ss_pred CchhhhhHhhheeEEec-CCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHH
Confidence 46899999999999975 59999999763211 0012
Q ss_pred HHHHHHHHcC----CCCcccccceeeecCCCCceEEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHH-HHH
Q 012233 179 RELQIMRLLN----HPNVVSLKHCFFSTTEKDELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRA-LNY 253 (468)
Q Consensus 179 ~E~~il~~l~----hpnIv~l~~~~~~~~~~~~~~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~a-L~y 253 (468)
+|...+.+++ ...-+++-.+|...+.. -.|+|||+.|.-......... ..++...+. ..++.+ +.-
T Consensus 210 ~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~----~VLtmE~i~Gi~i~d~~~l~~--~g~d~k~ia---~~~~~~f~~q 280 (517)
T COG0661 210 REAANAERFRENFKDDPDVYVPKVYWEYTTR----RVLTMEWIDGIKISDIAALKS--AGIDRKELA---ELLVRAFLRQ 280 (517)
T ss_pred HHHHHHHHHHHHcCCCCCeEeceeehhccCC----cEEEEEeeCCEecccHHHHHh--cCCCHHHHH---HHHHHHHHHH
Confidence 3554444442 22223333444322211 459999999854433322222 334422222 222221 111
Q ss_pred hHhcCCccccCCCCCCeeecCCCCcEEEeeecCccccCC
Q 012233 254 LHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVP 292 (468)
Q Consensus 254 LH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~ 292 (468)
+=. .|++|.|.+|.||+++.++ .+.+.|||+...+.+
T Consensus 281 ~~~-dgffHaDpHpGNi~v~~~g-~i~~lDfGi~g~l~~ 317 (517)
T COG0661 281 LLR-DGFFHADPHPGNILVRSDG-RIVLLDFGIVGRLDP 317 (517)
T ss_pred HHh-cCccccCCCccceEEecCC-cEEEEcCcceecCCH
Confidence 222 5999999999999999998 799999999876543
No 457
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.49 E-value=2.6e-06 Score=77.56 Aligned_cols=135 Identities=18% Similarity=0.236 Sum_probs=83.5
Q ss_pred ceEEeceecccCceEEEEEEEcCCCCEEEEEEeecccchH-------------HHHHHHHHHcCCCCcccccceeeecC-
Q 012233 138 SYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRYK-------------NRELQIMRLLNHPNVVSLKHCFFSTT- 203 (468)
Q Consensus 138 ~y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~~~~-------------~~E~~il~~l~hpnIv~l~~~~~~~~- 203 (468)
+|.+.+++-......|.+-.- +|+.+.+|......... .+++..+..+....+..+-+.++...
T Consensus 32 ~~~~~kv~k~~~r~~ValIei--~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~ek 109 (229)
T PF06176_consen 32 NYKIIKVFKNTKRNYVALIEI--DGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAAEK 109 (229)
T ss_pred CceEEEeecCCCccEEEEEEE--CCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeeeee
Confidence 588888888877777766654 78899999764432211 23444344443222222222111111
Q ss_pred --CCCceEEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEE
Q 012233 204 --EKDELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKI 281 (468)
Q Consensus 204 --~~~~~~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL 281 (468)
..-....+|||||++|.-+.... .++. .+...|..++.-||. .|+.|+|..|.|++++.++ +++
T Consensus 110 k~~~~~~~~~ll~EYIeG~~l~d~~-------~i~e----~~~~ki~~~ikqlH~-~G~~HGD~hpgNFlv~~~~--i~i 175 (229)
T PF06176_consen 110 KIFRYTSSYVLLMEYIEGVELNDIE-------DIDE----DLAEKIVEAIKQLHK-HGFYHGDPHPGNFLVSNNG--IRI 175 (229)
T ss_pred eeccceeEEEEEEEEecCeecccch-------hcCH----HHHHHHHHHHHHHHH-cCCccCCCCcCcEEEECCc--EEE
Confidence 11122356899999986432111 1221 234567788999998 8999999999999999654 999
Q ss_pred eeecCcc
Q 012233 282 CDFGSAK 288 (468)
Q Consensus 282 ~DFG~a~ 288 (468)
+||+..+
T Consensus 176 ID~~~k~ 182 (229)
T PF06176_consen 176 IDTQGKR 182 (229)
T ss_pred EECcccc
Confidence 9998764
No 458
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=98.47 E-value=5.8e-07 Score=97.66 Aligned_cols=206 Identities=20% Similarity=0.282 Sum_probs=133.4
Q ss_pred HHHHHHHHHHcCCCCcccccceeeecCCCCceEEEEEeecccch-HHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhH
Q 012233 177 KNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLH 255 (468)
Q Consensus 177 ~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv~e~~~~~-ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH 255 (468)
.+-|...+.++.|+|++.++.+-+.....+ ..+.+..++|+.. +...+. ....++...++.+..+++.||.|+|
T Consensus 229 ~E~e~~~l~k~~~~n~~~~~~~~le~~~~g-~~~~v~~~~~s~~~~~~~~q----~v~~i~~~~~r~~~~~~~~GL~~~h 303 (1351)
T KOG1035|consen 229 TEIELESLSKIAHDNLGGYFVYGLERLFRG-IVLDVLQEICSKVELRSLLQ----SVGSIPLETLRILHQKLLEGLAYLH 303 (1351)
T ss_pred HHHHHHHHHhhccccccceeEEeehhhcch-HHHHHHHhhcCccchHHHHh----hccccCHHHHHHHHHHHhhhHHHHH
Confidence 345777788899999999877654433222 1222345666643 222222 2456788889999999999999999
Q ss_pred hcCCccccCCCCC---CeeecCCCCcEEEe--eecCccccCCCCCCccccccCCccccccccCCC-CCCcchhHHHHHHH
Q 012233 256 HVVGVCHRDIKPQ---NLLVNPHTHQLKIC--DFGSAKMLVPGEPNISYICSRYYRAPELIFGAT-EYTTAIDMWSIGCV 329 (468)
Q Consensus 256 ~~~givHrDlkp~---NILl~~~~~~vkL~--DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~~DvwSlG~i 329 (468)
. ....|.-|... +..++..+ .+.++ ||+.+.................+.++|...... ......|+|.+|.+
T Consensus 304 ~-~~l~~v~L~~s~~~~~~~~~e~-~~~~sl~~~~ss~~l~d~~~~~~~~~~~~~~~~e~~~~~~~~~~r~~dL~~lgll 381 (1351)
T KOG1035|consen 304 S-LSLEHVVLSASSSKESTVDGEG-VVAISLSDFDSSKPLPDNEKSFSDLLAEIRNADEDLKENTAKKSRLTDLWCLGLL 381 (1351)
T ss_pred H-hccceeEEecccccccccCccc-eeecchhhhcccccCCCcccchhhcCccccccccccccccchhhhhhHHHHHHHH
Confidence 7 54444333333 22233333 45555 999888776666666667778888999874332 12334799999999
Q ss_pred HHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCC
Q 012233 330 LAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPS 409 (468)
Q Consensus 330 l~ell~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~ 409 (468)
+..+..|..+-.... ..... ..........+++.+|+.-+++
T Consensus 382 ~~~~~~~~~i~~~~~------~~~~~--------------------------------l~~~~~~~~~d~~~~~~~~~~~ 423 (1351)
T KOG1035|consen 382 LLQLSQGEDISEKSA------VPVSL--------------------------------LDVLSTSELLDALPKCLDEDSE 423 (1351)
T ss_pred HhhhhhcCccccccc------chhhh--------------------------------hccccchhhhhhhhhhcchhhh
Confidence 999998764321110 00000 0011112678999999999999
Q ss_pred CCCCHHHHhCCCCCCCCC
Q 012233 410 LRCTALEACAHPFFDDLR 427 (468)
Q Consensus 410 ~R~s~~ell~hp~f~~~~ 427 (468)
+|+++.+++.|||.+.-.
T Consensus 424 ~Rl~~~~ll~~~f~~~~~ 441 (1351)
T KOG1035|consen 424 ERLSALELLTHPFLRFPT 441 (1351)
T ss_pred hccchhhhhhchhccccc
Confidence 999999999999987633
No 459
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.41 E-value=3.4e-06 Score=77.70 Aligned_cols=131 Identities=19% Similarity=0.210 Sum_probs=88.5
Q ss_pred eecccCceEEEEEEEcCCCCEEEEEEeecccch----------------------------HHHHHHHHHHcC--CCCcc
Q 012233 144 VVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRY----------------------------KNRELQIMRLLN--HPNVV 193 (468)
Q Consensus 144 ~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~~~----------------------------~~~E~~il~~l~--hpnIv 193 (468)
.|.+|--+.||+|.. .++..+|+|++...... .++|+.-|+++. +=.+.
T Consensus 55 ~istGKEA~Vy~a~~-~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVrvP 133 (268)
T COG1718 55 CISTGKEANVYLAET-GDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVRVP 133 (268)
T ss_pred eecCCcceEEEeecc-CCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 677788889999984 56899999987432111 124777777774 33444
Q ss_pred cccceeeecCCCCceEEEEEeecccchHHHHHhhhhhc-CCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeee
Q 012233 194 SLKHCFFSTTEKDELYLNLVLEYISETVYRVSKHYTRM-NQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLV 272 (468)
Q Consensus 194 ~l~~~~~~~~~~~~~~~~lv~e~~~~~ll~~~~~~~~~-~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl 272 (468)
+-+.++ . -.|||||++..-. ..... .-......+..+..+++..+.-|-...|+||+||+.-|||+
T Consensus 134 ~Pi~~~-----~----nVLvMEfIg~~g~----pAP~LkDv~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~ 200 (268)
T COG1718 134 EPIAFR-----N----NVLVMEFIGDDGL----PAPRLKDVPLELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNILV 200 (268)
T ss_pred Cceeec-----C----CeEEEEeccCCCC----CCCCcccCCcCchhHHHHHHHHHHHHHHHHHhcCcccccchhhheEE
Confidence 444443 2 3589999986411 11111 11222235777788888888887644799999999999999
Q ss_pred cCCCCcEEEeeecCcccc
Q 012233 273 NPHTHQLKICDFGSAKML 290 (468)
Q Consensus 273 ~~~~~~vkL~DFG~a~~~ 290 (468)
. ++ .+.|+|||-|...
T Consensus 201 ~-~~-~p~iID~~QaV~~ 216 (268)
T COG1718 201 H-DG-EPYIIDVSQAVTI 216 (268)
T ss_pred E-CC-eEEEEECcccccc
Confidence 9 54 6999999998643
No 460
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.26 E-value=7.1e-06 Score=76.35 Aligned_cols=77 Identities=18% Similarity=0.158 Sum_probs=51.0
Q ss_pred eceecccCceEEEEEEEcCCCCEEEEEEeecc--cchHHHHHHHHHHcCCCC--cccccceeeecCCCCceEEEEEeecc
Q 012233 142 ERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD--KRYKNRELQIMRLLNHPN--VVSLKHCFFSTTEKDELYLNLVLEYI 217 (468)
Q Consensus 142 ~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~--~~~~~~E~~il~~l~hpn--Iv~l~~~~~~~~~~~~~~~~lv~e~~ 217 (468)
++.|+.|..+.||+..... ..+++|..... .....+|..+++.+.... +.+++..... .......+++|+++
T Consensus 2 i~~l~~G~~n~~~~v~~~~--~~~vlK~~~~~~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~--~~~~~~~~~~~~~i 77 (239)
T PF01636_consen 2 IRPLSGGFSNRVYRVTTDD--GRYVLKFYRPPDAAERLRREAAVLRQLAEHGIPVPRVLAFDTS--DEFNGFPYLLMEYI 77 (239)
T ss_dssp EEEEEESSSSEEEEEEETT--SEEEEEEESSHHHHHHHHHHHHHHHHHHHTTSBS--EEEEEEE--TEETSEEEEEEEEE
T ss_pred CccCCCCCeeeEEEEEECC--cEEEEEEeCCCCCHHHHHHHHHHHHHHHhcCCCCceEEeeccc--ccccccceEEEEEe
Confidence 3578999999999999743 58999987655 344567889988886443 3455442211 12233478999999
Q ss_pred cchHH
Q 012233 218 SETVY 222 (468)
Q Consensus 218 ~~~ll 222 (468)
.|..+
T Consensus 78 ~g~~~ 82 (239)
T PF01636_consen 78 PGRPL 82 (239)
T ss_dssp SSEEH
T ss_pred ccccc
Confidence 87533
No 461
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=98.22 E-value=7.6e-06 Score=71.40 Aligned_cols=127 Identities=20% Similarity=0.266 Sum_probs=85.8
Q ss_pred EEeceecccCceEEEEEEEcCCCCEEEEEEeecc--cchHHHHHHHHHHcCCCCccc-ccceeeecCCCCceEEEEEeec
Q 012233 140 MAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD--KRYKNRELQIMRLLNHPNVVS-LKHCFFSTTEKDELYLNLVLEY 216 (468)
Q Consensus 140 ~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~--~~~~~~E~~il~~l~hpnIv~-l~~~~~~~~~~~~~~~~lv~e~ 216 (468)
+..+.||+|.+|.||+|.+ .|..+|+|+-..+ ...+..|+++|..+.-.++.. +|.+- + .++.|||
T Consensus 25 ~v~~~L~KG~~s~Vyl~~~--~~~~~a~Kvrr~ds~r~~l~kEakiLeil~g~~~~p~vy~yg-----~----~~i~me~ 93 (201)
T COG2112 25 RVEKELAKGTTSVVYLGEW--RGGEVALKVRRRDSPRRNLEKEAKILEILAGEGVTPEVYFYG-----E----DFIRMEY 93 (201)
T ss_pred hhhhhhhcccccEEEEeec--cCceEEEEEecCCcchhhHHHHHHHHHHhhhcCCCceEEEec-----h----hhhhhhh
Confidence 4557899999999999998 6779999976544 445678999999998666544 22211 1 3467999
Q ss_pred ccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCC-CCCeeecCCCCcEEEeeecCccc
Q 012233 217 ISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIK-PQNLLVNPHTHQLKICDFGSAKM 289 (468)
Q Consensus 217 ~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlk-p~NILl~~~~~~vkL~DFG~a~~ 289 (468)
+.|--+.....- . -++-...++.+---|-. .||-|..|. |..++|..++ .+.|+||..|+.
T Consensus 94 i~G~~L~~~~~~------~----~rk~l~~vlE~a~~LD~-~GI~H~El~~~~k~vlv~~~-~~~iIDFd~At~ 155 (201)
T COG2112 94 IDGRPLGKLEIG------G----DRKHLLRVLEKAYKLDR-LGIEHGELSRPWKNVLVNDR-DVYIIDFDSATF 155 (201)
T ss_pred hcCcchhhhhhc------c----cHHHHHHHHHHHHHHHH-hccchhhhcCCceeEEecCC-cEEEEEccchhh
Confidence 998433321110 0 12234456666445555 799999996 6555555455 699999999874
No 462
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=98.19 E-value=1.1e-05 Score=83.06 Aligned_cols=140 Identities=16% Similarity=0.208 Sum_probs=82.9
Q ss_pred eceecccCceEEEEEEEcCCCCEEEEEEeecccc-----------------------------------------hHHHH
Q 012233 142 ERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKR-----------------------------------------YKNRE 180 (468)
Q Consensus 142 ~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~~-----------------------------------------~~~~E 180 (468)
.+.||..+.|+||+|+.+. |+.||||+-+...+ .+.+|
T Consensus 166 ~~piaaASlaQVhrA~L~~-G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~E 244 (538)
T KOG1235|consen 166 EEPIAAASLAQVHRARLKN-GEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKE 244 (538)
T ss_pred cchhhhcchhheEEEEecC-CCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHH
Confidence 3579999999999999754 99999997532210 01123
Q ss_pred HHH----HHHcCCCC---cccccceeeecCCCCceEEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHH
Q 012233 181 LQI----MRLLNHPN---VVSLKHCFFSTTEKDELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNY 253 (468)
Q Consensus 181 ~~i----l~~l~hpn---Iv~l~~~~~~~~~~~~~~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~y 253 (468)
.+- .+.+.|-+ -|++-.+|...+. .-.|+||||.|.-+..+.... ...++...+...+.++..-+-
T Consensus 245 A~Nae~~~~~f~~~~~~~~V~VP~Vy~~~st----~RVLtME~~~G~~i~Dl~~i~--~~gi~~~~i~~~l~~~~~~qI- 317 (538)
T KOG1235|consen 245 AKNAERFRENFKDFSLLTYVLVPKVYWDLST----KRVLTMEYVDGIKINDLDAID--KRGISPHDILNKLVEAYLEQI- 317 (538)
T ss_pred HHhHHHHHHHHHhcccccceeCCeehhhcCc----ceEEEEEecCCccCCCHHHHH--HcCCCHHHHHHHHHHHHHHHH-
Confidence 322 22334555 2223333432222 246999999985443333322 233554443332222221111
Q ss_pred hHhcCCccccCCCCCCeeecC---CCCcEEEeeecCccccC
Q 012233 254 LHHVVGVCHRDIKPQNLLVNP---HTHQLKICDFGSAKMLV 291 (468)
Q Consensus 254 LH~~~givHrDlkp~NILl~~---~~~~vkL~DFG~a~~~~ 291 (468)
++ .|++|+|=.|.||++++ .+..+.+-|||+...+.
T Consensus 318 f~--~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is 356 (538)
T KOG1235|consen 318 FK--TGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVIS 356 (538)
T ss_pred Hh--cCCccCCCCCCcEEEecCCCCCccEEEEccccccccc
Confidence 12 58999999999999984 24479999999987653
No 463
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.14 E-value=2.3e-05 Score=73.09 Aligned_cols=135 Identities=16% Similarity=0.131 Sum_probs=75.9
Q ss_pred ceecccCceEEEEEEEcCCCCEEEEEEeecc--cchHHHHHHHHHHcCCCCc--ccccceeeecCCCCceEEEEEeeccc
Q 012233 143 RVVGTGSFGVVFQAKCLETGDSVAIKKVLQD--KRYKNRELQIMRLLNHPNV--VSLKHCFFSTTEKDELYLNLVLEYIS 218 (468)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~--~~~~~~E~~il~~l~hpnI--v~l~~~~~~~~~~~~~~~~lv~e~~~ 218 (468)
..||.|..+.||+. .|..+++|..... .....+|.++++.+..-.+ .+++++. .+.....+|||++.
T Consensus 7 ~~i~~G~t~~~y~~----~~~~~VlR~~~~~~~~~~i~~E~~~l~~l~~~glpvP~~~~~~-----~~~~~~glv~e~i~ 77 (226)
T TIGR02172 7 TQTGEGGNGESYTH----KTGKWMLKLYNPGFDKETIKREFDASRKVFSLGIPTPHPFDLV-----EDGGRLGLIYELIV 77 (226)
T ss_pred eeecCCCCcceeEe----cCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHcCCCCCceEEEE-----ecCCeeeeeeeecC
Confidence 46899999999984 2556778876542 2345789999998864333 4444433 22223568999999
Q ss_pred chH-----HH--------H---Hhh-hhhcC----CCCCHHH-HHHHHHHH----------HH-HHHHhH---hcCCccc
Q 012233 219 ETV-----YR--------V---SKH-YTRMN----QHVPILY-VQLYTYQI----------CR-ALNYLH---HVVGVCH 262 (468)
Q Consensus 219 ~~l-----l~--------~---~~~-~~~~~----~~~~~~~-~~~~~~qi----------~~-aL~yLH---~~~givH 262 (468)
|.. +. + +.. ..+.+ ...+... ...+..++ .. ...+|. ....++|
T Consensus 78 G~~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~H 157 (226)
T TIGR02172 78 GKRSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLH 157 (226)
T ss_pred CccchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEe
Confidence 841 10 0 000 00001 0111111 01111111 11 122222 1135789
Q ss_pred cCCCCCCeeecCCCCcEEEeeecCcc
Q 012233 263 RDIKPQNLLVNPHTHQLKICDFGSAK 288 (468)
Q Consensus 263 rDlkp~NILl~~~~~~vkL~DFG~a~ 288 (468)
+|+.|.||+++.++ +.|+||+.+.
T Consensus 158 gD~~~~Nii~~~~~--~~iIDwe~a~ 181 (226)
T TIGR02172 158 GDFQIGNLITSGKG--TYWIDLGDFG 181 (226)
T ss_pred cCCCCCcEEEcCCC--cEEEechhcC
Confidence 99999999999765 8899999875
No 464
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=98.02 E-value=3.2e-05 Score=69.69 Aligned_cols=126 Identities=24% Similarity=0.308 Sum_probs=88.0
Q ss_pred cceEEeceecccCc-eEEEEEEEcCCCCEEEEEEeec--------------c-c----------chHHHHHHHHHHc---
Q 012233 137 ISYMAERVVGTGSF-GVVFQAKCLETGDSVAIKKVLQ--------------D-K----------RYKNRELQIMRLL--- 187 (468)
Q Consensus 137 ~~y~~~~~lG~G~f-g~Vy~~~~~~~g~~vaiK~~~~--------------~-~----------~~~~~E~~il~~l--- 187 (468)
.+++..+.||.|.- |.||+++. .|..||||.+.. . . ..+..|.+...+|
T Consensus 37 ~~I~flefLg~g~~~~~V~kv~I--~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~ 114 (207)
T PF13095_consen 37 DDIEFLEFLGHGSHDGYVFKVEI--DGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEA 114 (207)
T ss_pred CcEeeeeecCCCCceeEEEEEEE--CCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhc
Confidence 35889999999999 99999987 788999998311 0 0 0123465554444
Q ss_pred CCCCc--ccccceeeecCC-------------CCceEEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHH
Q 012233 188 NHPNV--VSLKHCFFSTTE-------------KDELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALN 252 (468)
Q Consensus 188 ~hpnI--v~l~~~~~~~~~-------------~~~~~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~ 252 (468)
.+.++ |++++++....+ .......||.||+.... .+. ..-+.+|++-|.
T Consensus 115 ~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~------------~~~----~~~~~~~~~dl~ 178 (207)
T PF13095_consen 115 GREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP------------PLQ----IRDIPQMLRDLK 178 (207)
T ss_pred cccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc------------ccc----hhHHHHHHHHHH
Confidence 56666 999998865521 11122458888887542 111 123568888899
Q ss_pred HhHhcCCccccCCCCCCeeecCCCCcEEEeeecCc
Q 012233 253 YLHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSA 287 (468)
Q Consensus 253 yLH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a 287 (468)
.||. .||+-+|+++.|.. + -||+|||.+
T Consensus 179 ~~~k-~gI~~~Dv~~~ny~---~---G~lvDfs~~ 206 (207)
T PF13095_consen 179 ILHK-LGIVPRDVKPRNYR---G---GKLVDFSSS 206 (207)
T ss_pred HHHH-CCeeeccCcccccc---C---CEEEecccC
Confidence 9998 89999999999976 3 379999864
No 465
>PLN02876 acyl-CoA dehydrogenase
Probab=97.92 E-value=0.00013 Score=81.00 Aligned_cols=77 Identities=18% Similarity=0.207 Sum_probs=49.8
Q ss_pred eceecccCceEEEEEEEcCCC--CEEEEEEeec-----ccchHHHHHHHHHHcC-CCCc--ccccceeeecCCCCceEEE
Q 012233 142 ERVVGTGSFGVVFQAKCLETG--DSVAIKKVLQ-----DKRYKNRELQIMRLLN-HPNV--VSLKHCFFSTTEKDELYLN 211 (468)
Q Consensus 142 ~~~lG~G~fg~Vy~~~~~~~g--~~vaiK~~~~-----~~~~~~~E~~il~~l~-hpnI--v~l~~~~~~~~~~~~~~~~ 211 (468)
.+.|+.|.+..+|+......+ ..+++|+... ......+|+.+|+.+. |.+| .+++.++... ......|
T Consensus 43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~--~v~G~~f 120 (822)
T PLN02876 43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDA--SVIGTAF 120 (822)
T ss_pred EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCC--CcCCCce
Confidence 356789999999998764332 3677776532 2245678999999996 6664 4544443211 1112357
Q ss_pred EEeecccch
Q 012233 212 LVLEYISET 220 (468)
Q Consensus 212 lv~e~~~~~ 220 (468)
+||||+.|.
T Consensus 121 lVME~v~G~ 129 (822)
T PLN02876 121 YIMEYLEGR 129 (822)
T ss_pred EEEEecCCc
Confidence 999999875
No 466
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=97.91 E-value=9.4e-05 Score=69.76 Aligned_cols=68 Identities=15% Similarity=0.030 Sum_probs=41.8
Q ss_pred CceEEEEEEEcCCCCEEEEEEeecc-cchHHHHHHHHHHcC-CCCcccccceeeecCCCCceEEEEEeecccchHHH
Q 012233 149 SFGVVFQAKCLETGDSVAIKKVLQD-KRYKNRELQIMRLLN-HPNVVSLKHCFFSTTEKDELYLNLVLEYISETVYR 223 (468)
Q Consensus 149 ~fg~Vy~~~~~~~g~~vaiK~~~~~-~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~~~~~~lv~e~~~~~ll~ 223 (468)
.-..||+... .+..+.+|..... .....+|+++++.+. +--+.+++++.. ....-++|||+++|..+.
T Consensus 11 ~~~~v~~~~~--~~~~~~vk~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~-----~~~~~~lv~e~i~G~~l~ 80 (244)
T cd05150 11 SGATVYRLDG--KNPGLYLKIAPSGPTYELEREAERLRWLAGKLPVPEVIDYGS-----DDGRAWLLTSAVPGVPAA 80 (244)
T ss_pred CcCeEEEEcC--CCCcEEEEecCCCcccchHHHHHHHHHHHhcCCCCeEEEEEe-----cCCccEEEEEeeCCccHh
Confidence 3378899865 3467788876432 234567999998885 323444544431 112356899999885443
No 467
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=97.63 E-value=0.00037 Score=65.33 Aligned_cols=30 Identities=33% Similarity=0.421 Sum_probs=24.8
Q ss_pred CCccccCCCCCCeeecCCCCcEEEeeecCcc
Q 012233 258 VGVCHRDIKPQNLLVNPHTHQLKICDFGSAK 288 (468)
Q Consensus 258 ~givHrDlkp~NILl~~~~~~vkL~DFG~a~ 288 (468)
.+++|+|+.+.|||++.+. ..-|+||+.+.
T Consensus 164 ~~l~HGD~~~~Nvlv~~~~-i~giIDw~~a~ 193 (235)
T cd05155 164 PVWFHGDLAPGNLLVQDGR-LSAVIDFGCLG 193 (235)
T ss_pred ceEEeCCCCCCcEEEECCC-EEEEEeCcccC
Confidence 3589999999999998654 45699999874
No 468
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=97.55 E-value=0.00054 Score=66.69 Aligned_cols=137 Identities=20% Similarity=0.250 Sum_probs=91.4
Q ss_pred EEeceecccCceEEEEEEEcCCCCEEEEEEeecc-------cc-----------------------hHHHHHHHHHHcCC
Q 012233 140 MAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD-------KR-----------------------YKNRELQIMRLLNH 189 (468)
Q Consensus 140 ~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~-------~~-----------------------~~~~E~~il~~l~h 189 (468)
.+.-+|..|--+.||.|. ..+|..+|||+++.. .+ -.+.|+.-|++|..
T Consensus 147 ~inGCiSTGKEANVYHat-~~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~ 225 (520)
T KOG2270|consen 147 EINGCISTGKEANVYHAT-EEDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNN 225 (520)
T ss_pred ecccccccCccceeEeee-cCCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHh
Confidence 344567888888999998 467889999977321 11 11357777888865
Q ss_pred CCcccccceeeecCCCCceEEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCC
Q 012233 190 PNVVSLKHCFFSTTEKDELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQN 269 (468)
Q Consensus 190 pnIv~l~~~~~~~~~~~~~~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~N 269 (468)
..|...--++ ... -+|||+|++..-.- .-......++...+..+-.|++.-+.-|-+.++.||.||.--|
T Consensus 226 aGIP~PePIl-Lk~------hVLVM~FlGrdgw~---aPkLKd~~ls~~ka~~~Y~~~v~~MR~lY~~c~LVHADLSEfN 295 (520)
T KOG2270|consen 226 AGIPCPEPIL-LKN------HVLVMEFLGRDGWA---APKLKDASLSTSKARELYQQCVRIMRRLYQKCRLVHADLSEFN 295 (520)
T ss_pred cCCCCCCcee-eec------ceEeeeeccCCCCc---CcccccccCChHHHHHHHHHHHHHHHHHHHHhceeccchhhhh
Confidence 4433221111 111 24899999853111 1111234466667777778888888887555899999999999
Q ss_pred eeecCCCCcEEEeeecCccc
Q 012233 270 LLVNPHTHQLKICDFGSAKM 289 (468)
Q Consensus 270 ILl~~~~~~vkL~DFG~a~~ 289 (468)
+|+.. | .+.|+|.+-+..
T Consensus 296 ~Lyhd-G-~lyiIDVSQSVE 313 (520)
T KOG2270|consen 296 LLYHD-G-KLYIIDVSQSVE 313 (520)
T ss_pred heEEC-C-EEEEEEcccccc
Confidence 99984 4 599999988743
No 469
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=97.54 E-value=0.00037 Score=66.21 Aligned_cols=132 Identities=20% Similarity=0.238 Sum_probs=74.4
Q ss_pred ecccCceEEEEEEEcCCCCEEEEEEeeccc----chHHHHHHHHHHcCCCCcc-cccceeeecCCCCceEEEEEeecccc
Q 012233 145 VGTGSFGVVFQAKCLETGDSVAIKKVLQDK----RYKNRELQIMRLLNHPNVV-SLKHCFFSTTEKDELYLNLVLEYISE 219 (468)
Q Consensus 145 lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~----~~~~~E~~il~~l~hpnIv-~l~~~~~~~~~~~~~~~~lv~e~~~~ 219 (468)
+..|-.+.+|+... ++..+++|...... ....+|..+++.+....++ +++... . -++||||++|
T Consensus 4 ~~~G~tn~~y~~~~--~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~-----~----~~~v~e~i~G 72 (256)
T TIGR02721 4 LSGGLTNRSWRIEH--PGISFVWRPQSPVCKALGVDRQREYQILQALSALGLAPKPILVN-----E----HWLLVEWLEG 72 (256)
T ss_pred CCCcCcCCeEEEEe--CCccEEEeeCCcccccccCcHHHHHHHHHHHHhcCCCCceEEEe-----C----CEEEEEeccC
Confidence 45677788898863 56788888754332 2356799999999754343 232221 1 2489999987
Q ss_pred hHHHH------------Hh-----hhhh-cCCCCCHH-HHHHHHHHH---------HHHHHHhHh-------cCCccccC
Q 012233 220 TVYRV------------SK-----HYTR-MNQHVPIL-YVQLYTYQI---------CRALNYLHH-------VVGVCHRD 264 (468)
Q Consensus 220 ~ll~~------------~~-----~~~~-~~~~~~~~-~~~~~~~qi---------~~aL~yLH~-------~~givHrD 264 (468)
..+.. .. |... ....+... .+..+..++ ...+..+-. ...++|+|
T Consensus 73 ~~~~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~D 152 (256)
T TIGR02721 73 EVITLDQFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMD 152 (256)
T ss_pred cccccccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCC
Confidence 43321 00 0000 01112211 122222222 111222211 12589999
Q ss_pred CCCCCeeecCCCCcEEEeeecCccc
Q 012233 265 IKPQNLLVNPHTHQLKICDFGSAKM 289 (468)
Q Consensus 265 lkp~NILl~~~~~~vkL~DFG~a~~ 289 (468)
+.|.||+++.++ +.|+||+.+..
T Consensus 153 l~~~Nil~~~~~--~~lIDwE~a~~ 175 (256)
T TIGR02721 153 VHAYNLVVTPQG--LKLIDWEYASD 175 (256)
T ss_pred CCcCcEEEeCCC--CEEEeccccCc
Confidence 999999999765 78999998854
No 470
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=97.53 E-value=0.00095 Score=60.60 Aligned_cols=127 Identities=20% Similarity=0.308 Sum_probs=79.7
Q ss_pred ceecccCceEEEEEEEcCCCCEEEEEEeeccc--------------------chHHHHHHHHHHcC------CCCccccc
Q 012233 143 RVVGTGSFGVVFQAKCLETGDSVAIKKVLQDK--------------------RYKNRELQIMRLLN------HPNVVSLK 196 (468)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~~--------------------~~~~~E~~il~~l~------hpnIv~l~ 196 (468)
..||+|+.-.||.-- ......||+..... ....+|+.-...+. +.+|.+++
T Consensus 7 ~~i~~G~~R~cy~HP---~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~ 83 (199)
T PF10707_consen 7 DLIAQGGERDCYQHP---DDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFY 83 (199)
T ss_pred cccccCCCceEEECC---CCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEe
Confidence 469999999999753 34456678875544 34456777666666 78899999
Q ss_pred ceeeecCCCCceEEEEEeeccc---chHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeec
Q 012233 197 HCFFSTTEKDELYLNLVLEYIS---ETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVN 273 (468)
Q Consensus 197 ~~~~~~~~~~~~~~~lv~e~~~---~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~ 273 (468)
|+..+..+ ..+|+|.+. |..-..+..+.. ...++. .. ...+-.-..||-. .+|+.+||+|.||++.
T Consensus 84 G~veT~~G-----~Glv~e~I~d~dG~~s~TL~~~l~-~~~~~~-~~---~~~L~~f~~~l~~-~~Iv~~dl~~~NIv~~ 152 (199)
T PF10707_consen 84 GFVETNLG-----LGLVVELIRDADGNISPTLEDYLK-EGGLTE-EL---RQALDEFKRYLLD-HHIVIRDLNPHNIVVQ 152 (199)
T ss_pred EEEecCCc-----eEEEEEEEECCCCCcCccHHHHHH-cCCccH-HH---HHHHHHHHHHHHH-cCCeecCCCcccEEEE
Confidence 98744433 567777764 221111112221 233444 22 3334445567776 7999999999999995
Q ss_pred CCC--C-cEEEee
Q 012233 274 PHT--H-QLKICD 283 (468)
Q Consensus 274 ~~~--~-~vkL~D 283 (468)
... . .+.|+|
T Consensus 153 ~~~~~~~~lvlID 165 (199)
T PF10707_consen 153 RRDSGEFRLVLID 165 (199)
T ss_pred ecCCCceEEEEEe
Confidence 432 2 466666
No 471
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=97.52 E-value=0.001 Score=66.94 Aligned_cols=70 Identities=24% Similarity=0.329 Sum_probs=46.2
Q ss_pred ceecccCceEEEEEEEcCCCCEEEEEEee-------c----ccchHHHHHHHHHHcC---CCCcccccceeeecCCCCce
Q 012233 143 RVVGTGSFGVVFQAKCLETGDSVAIKKVL-------Q----DKRYKNRELQIMRLLN---HPNVVSLKHCFFSTTEKDEL 208 (468)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~-------~----~~~~~~~E~~il~~l~---hpnIv~l~~~~~~~~~~~~~ 208 (468)
+.||.|.+..||++.....++.|+||+-. . .......|.+.|+.+. -.++.+++.+- . .
T Consensus 32 ~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~D-----~--~ 104 (401)
T PRK09550 32 REIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHYD-----E--E 104 (401)
T ss_pred eEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEEC-----C--C
Confidence 56899999999999985433589999742 1 1122345788887763 24566665542 1 2
Q ss_pred EEEEEeecccc
Q 012233 209 YLNLVLEYISE 219 (468)
Q Consensus 209 ~~~lv~e~~~~ 219 (468)
..++||||+++
T Consensus 105 ~~~lVME~L~~ 115 (401)
T PRK09550 105 LAVTVMEDLSD 115 (401)
T ss_pred CCEEEEecCCC
Confidence 25689999875
No 472
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=97.52 E-value=0.00024 Score=64.06 Aligned_cols=102 Identities=22% Similarity=0.202 Sum_probs=75.1
Q ss_pred HHHHHHHHHcCC-CCcccccceeeecCCCCceEEEEEeecccch-HHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhH
Q 012233 178 NRELQIMRLLNH-PNVVSLKHCFFSTTEKDELYLNLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLH 255 (468)
Q Consensus 178 ~~E~~il~~l~h-pnIv~l~~~~~~~~~~~~~~~~lv~e~~~~~-ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH 255 (468)
..|.-+|+.+++ +++.+++|.+ . -++|.||.+.+ ++... .....-...++..+.+++.+++..+.+|+
T Consensus 7 ~~E~lll~~l~~~~~~pk~lG~C-----G----~~~v~E~~~~~~~~~~~-~~l~~~~~~~w~~R~~iA~~lL~~l~~l~ 76 (188)
T PF12260_consen 7 NNEPLLLQLLQGSEPFPKLLGSC-----G----RFYVVEYVGAGSLYGIY-RPLSQFLQSPWEQRAKIALQLLELLEELD 76 (188)
T ss_pred ccHHHHHHHcCCCCCCCCeeeEC-----C----CEEEEEeecCccccccc-cccccccccCHHHHHHHHHHHHHHHHHHh
Confidence 358889999986 6999999987 2 34789999853 22110 00001133688889999999999999998
Q ss_pred hc--CCccccCCCCCCeeecCCCCcEEEeeecCcccc
Q 012233 256 HV--VGVCHRDIKPQNLLVNPHTHQLKICDFGSAKML 290 (468)
Q Consensus 256 ~~--~givHrDlkp~NILl~~~~~~vkL~DFG~a~~~ 290 (468)
+. ..+.-.|++++|+-++.++ .+|++|...+...
T Consensus 77 ~~~~~~~~lcDv~~~nfgv~~~~-~lk~iDld~v~~~ 112 (188)
T PF12260_consen 77 HGPLGFFYLCDVSPDNFGVNDDG-RLKLIDLDDVFVE 112 (188)
T ss_pred cCCCCcEEEeecchHHeEEeCCC-cEEEEechhcchh
Confidence 41 1366689999999999887 7999999987443
No 473
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=97.50 E-value=0.0019 Score=60.42 Aligned_cols=69 Identities=22% Similarity=0.330 Sum_probs=44.3
Q ss_pred ceecccCceEEEEEEEcC-CCCEEEEEEeeccc---chHHHHHHHHHHcCCCCc-ccccceeeecCCCCceEEEEEeecc
Q 012233 143 RVVGTGSFGVVFQAKCLE-TGDSVAIKKVLQDK---RYKNRELQIMRLLNHPNV-VSLKHCFFSTTEKDELYLNLVLEYI 217 (468)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~-~g~~vaiK~~~~~~---~~~~~E~~il~~l~hpnI-v~l~~~~~~~~~~~~~~~~lv~e~~ 217 (468)
+.|..|-...||++.... .++.|++|+..... ...++|+.+++.+....+ .+++..+ .+ .+||||+
T Consensus 4 ~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~~~d~~~E~~~~~~l~~~gl~P~v~~~~-----~~----~~l~e~i 74 (235)
T cd05157 4 KRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTELIIDRERELRIHKLLSKHGLAPKLYATF-----QN----GLIYEFI 74 (235)
T ss_pred EEcCCcccceEEEEEcCCCCCCeEEEEEccCCccceecHHHHHHHHHHHHhCCCCCeEEEEe-----CC----cEEEEee
Confidence 457788888999987532 35788899764322 233579999999864444 3333222 11 3799998
Q ss_pred cch
Q 012233 218 SET 220 (468)
Q Consensus 218 ~~~ 220 (468)
+|.
T Consensus 75 ~G~ 77 (235)
T cd05157 75 PGR 77 (235)
T ss_pred CCC
Confidence 864
No 474
>PRK10593 hypothetical protein; Provisional
Probab=97.42 E-value=0.0025 Score=61.97 Aligned_cols=75 Identities=7% Similarity=0.002 Sum_probs=50.1
Q ss_pred eceecccCceEEEEEEEcCCCCEEEEEEeec--ccchHHHHHHHHHHcCC---CCcccccceeeecCCCCceEEEEEeec
Q 012233 142 ERVVGTGSFGVVFQAKCLETGDSVAIKKVLQ--DKRYKNRELQIMRLLNH---PNVVSLKHCFFSTTEKDELYLNLVLEY 216 (468)
Q Consensus 142 ~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~--~~~~~~~E~~il~~l~h---pnIv~l~~~~~~~~~~~~~~~~lv~e~ 216 (468)
.+.||.|..+.||.... .+..+.+|..+. ....+..|...|+.|.. -.+.++++++.... ....-+||||+
T Consensus 19 ~~~i~~G~~~~vy~~~~--~~~~~~~k~~~~~~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~--~~g~~~LVmE~ 94 (297)
T PRK10593 19 VECISEQPYAALWALYD--SQGNPMPLMARSFSTPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQ--SPGPDVLLLER 94 (297)
T ss_pred eeecCCccceeEEEEEc--CCCCEEEEEecccccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCC--cCCCeEEEEec
Confidence 35699999999999864 333566777544 23477889999998864 24666665542211 11236799999
Q ss_pred ccch
Q 012233 217 ISET 220 (468)
Q Consensus 217 ~~~~ 220 (468)
+.|.
T Consensus 95 i~G~ 98 (297)
T PRK10593 95 LRGV 98 (297)
T ss_pred cCCE
Confidence 8864
No 475
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=97.35 E-value=0.00019 Score=68.64 Aligned_cols=128 Identities=16% Similarity=0.201 Sum_probs=85.9
Q ss_pred eEEeceecccCceEEEEEEEcCCCCEEEEEEee----------cc----------------cchHHHHHHHHHHcC-CCC
Q 012233 139 YMAERVVGTGSFGVVFQAKCLETGDSVAIKKVL----------QD----------------KRYKNRELQIMRLLN-HPN 191 (468)
Q Consensus 139 y~~~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~----------~~----------------~~~~~~E~~il~~l~-hpn 191 (468)
|.+++.||-|--+.||.+-+ ..|...++|.-. .. +....+|+..|+.|. |..
T Consensus 94 ~svGnqIGVGKESDIY~v~d-~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~gf 172 (465)
T KOG2268|consen 94 ESVGNQIGVGKESDIYVVAD-EEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERGF 172 (465)
T ss_pred hhhccccccccccceEEEec-CCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcCC
Confidence 66778899999999999986 458888888421 11 111236888888885 322
Q ss_pred -cccccceeeecCCCCceEEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCe
Q 012233 192 -VVSLKHCFFSTTEKDELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNL 270 (468)
Q Consensus 192 -Iv~l~~~~~~~~~~~~~~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NI 270 (468)
|.+.+++. .-|+|||++.|--+..+.+. .. ...+...+..-+.-|-+ +|+||+|..--||
T Consensus 173 pVPkpiD~~---------RH~Vvmelv~g~Pl~~v~~v------~d---~~~ly~~lm~~Iv~la~-~GlIHgDFNEFNi 233 (465)
T KOG2268|consen 173 PVPKPIDHN---------RHCVVMELVDGYPLRQVRHV------ED---PPTLYDDLMGLIVRLAN-HGLIHGDFNEFNI 233 (465)
T ss_pred CCCCccccc---------ceeeHHHhhcccceeeeeec------CC---hHHHHHHHHHHHHHHHH-cCceecccchhee
Confidence 33343332 35689999987544322211 11 22334455555667777 8999999999999
Q ss_pred eecCCCCcEEEeeecCc
Q 012233 271 LVNPHTHQLKICDFGSA 287 (468)
Q Consensus 271 Ll~~~~~~vkL~DFG~a 287 (468)
+|+.++ .++++||--.
T Consensus 234 mv~dd~-~i~vIDFPQm 249 (465)
T KOG2268|consen 234 MVKDDD-KIVVIDFPQM 249 (465)
T ss_pred EEecCC-CEEEeechHh
Confidence 999777 6999999764
No 476
>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]
Probab=97.33 E-value=0.00014 Score=81.50 Aligned_cols=213 Identities=15% Similarity=0.010 Sum_probs=129.7
Q ss_pred HHHHHHHcCCCCcccccceeeecCCCCceEEEEEeecccchH-HHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcC
Q 012233 180 ELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVLEYISETV-YRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVV 258 (468)
Q Consensus 180 E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv~e~~~~~l-l~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ 258 (468)
|...++...|+++...+.-... ......+++++|+.+|. ...+..-..........-+.....+.+.+..-+|...
T Consensus 1279 e~de~~~~~h~~~~~~p~rI~p---s~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls~t 1355 (2724)
T KOG1826|consen 1279 ERDELREAKHYLTEVDPLRIPP---SESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILSLT 1355 (2724)
T ss_pred hhhhhhhhhceeeecccccCCC---CCChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhhcc
Confidence 4455666789988776543322 22233567899998653 3433332222222222223333334366666666422
Q ss_pred C----ccccCCCCCCeeecCCCCcEEEeeecCccccCCC-CCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHH
Q 012233 259 G----VCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPG-EPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAEL 333 (468)
Q Consensus 259 g----ivHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~el 333 (468)
+ .+|++||+-|.+|..+. .+|++++|+.+...+. .......+++.|+.|++.. .-.++.++|+|..|+.+|++
T Consensus 1356 nlg~T~v~~~Lkf~lpmIVtny-~v~~gk~gLdKIknp~~sf~Gl~l~sp~~v~qli~N-~ik~t~rsdilr~s~~ly~r 1433 (2724)
T KOG1826|consen 1356 NLGNTNVSKSLKFTLPMIVTNY-NVKLGKGGLDKIKNPVLSFFGLELCSPIYVLQLIKN-EIKFTKRSDILRRSLSLYLR 1433 (2724)
T ss_pred cCCccchhhhhhhhccceecCC-cccccccccccccCchHhhhhhhhCCHHHHHHHHHH-HHhhhhHHHHHHHHHHHHHH
Confidence 2 67999999999998776 7999999999833322 2334567788999999774 44588889999999999999
Q ss_pred HhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCC
Q 012233 334 LLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCT 413 (468)
Q Consensus 334 l~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s 413 (468)
..|..+|. .....+.+ +.-.+-..+.++ ...|.++......+|-+.-..||.
T Consensus 1434 s~~n~~fi-----~flq~~Lk-----------giidn~tf~sIe------------~l~pgdaNve~~~~Ll~K~~~rp~ 1485 (2724)
T KOG1826|consen 1434 SDGNAYFI-----FFLQPALK-----------GIIDNHTFFSIE------------KLKPGDANVEALHRLLWKYMERPG 1485 (2724)
T ss_pred hcccHHHH-----HHHHHHHc-----------Cccccccccccc------------ccCCCcccHHHHHHHHHHhhhcch
Confidence 99987772 22222222 111111222222 223444555555555555678888
Q ss_pred HHHHhCCCCCCC
Q 012233 414 ALEACAHPFFDD 425 (468)
Q Consensus 414 ~~ell~hp~f~~ 425 (468)
-...+.-+.|..
T Consensus 1486 q~isls~d~~a~ 1497 (2724)
T KOG1826|consen 1486 QYISLSRDHFAV 1497 (2724)
T ss_pred hhhhcccccccc
Confidence 888888777654
No 477
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=97.33 E-value=0.00078 Score=65.45 Aligned_cols=144 Identities=11% Similarity=0.023 Sum_probs=77.2
Q ss_pred eceecccCceEEEEEEEcCCCCEEEEEEeec-ccchHHHHHHHHHHcCCCC--cccccceeeec-CCCCceEEEEEeecc
Q 012233 142 ERVVGTGSFGVVFQAKCLETGDSVAIKKVLQ-DKRYKNRELQIMRLLNHPN--VVSLKHCFFST-TEKDELYLNLVLEYI 217 (468)
Q Consensus 142 ~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~-~~~~~~~E~~il~~l~hpn--Iv~l~~~~~~~-~~~~~~~~~lv~e~~ 217 (468)
.+.|..|....+|+... .+..+++|+... .......|+.++..|.+.. +.+++...... ........++|++|+
T Consensus 19 i~~i~~G~~n~~y~v~~--~~~~~vLr~~~~~~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~l~~~i 96 (296)
T cd05153 19 FEGISAGIENTNYFVTT--DSGRYVLTLFEKVSAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAALVEFL 96 (296)
T ss_pred eecccCccccceEEEEe--CCCcEEEEEcCCCChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEEEEEeC
Confidence 34577787789998864 445788898763 2334557888888885432 34443321000 001112357899999
Q ss_pred cchHHH---------HHh-----h-hh-hcCC------CCCHHHH--H--------HHHHHHHHHHHHhHh------cCC
Q 012233 218 SETVYR---------VSK-----H-YT-RMNQ------HVPILYV--Q--------LYTYQICRALNYLHH------VVG 259 (468)
Q Consensus 218 ~~~ll~---------~~~-----~-~~-~~~~------~~~~~~~--~--------~~~~qi~~aL~yLH~------~~g 259 (468)
+|..+. +.. | .. .... ...+... . .....+..++.++.. ..+
T Consensus 97 ~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~ 176 (296)
T cd05153 97 AGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDPSDLPRG 176 (296)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhhhcCCCc
Confidence 863221 000 0 00 0000 0000000 0 001112233344431 147
Q ss_pred ccccCCCCCCeeecCCCCcEEEeeecCcc
Q 012233 260 VCHRDIKPQNLLVNPHTHQLKICDFGSAK 288 (468)
Q Consensus 260 ivHrDlkp~NILl~~~~~~vkL~DFG~a~ 288 (468)
++|+|+.|.|||++.++ .+.|+||+.+.
T Consensus 177 l~HgD~~~~Nil~~~~~-~~~iIDfe~a~ 204 (296)
T cd05153 177 VIHADLFRDNVLFDGDE-LSGVIDFYFAC 204 (296)
T ss_pred CCccCcCcccEEEeCCc-eEEEeehhhhc
Confidence 99999999999999765 46899999874
No 478
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=97.22 E-value=0.0039 Score=60.94 Aligned_cols=144 Identities=14% Similarity=0.063 Sum_probs=76.8
Q ss_pred eceecccCceEEEEEEEcCCCCEEEEEEeecc--cchHHHHHHHHHHcCCCC--cccccceeeec-CCCCceEEEEEeec
Q 012233 142 ERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD--KRYKNRELQIMRLLNHPN--VVSLKHCFFST-TEKDELYLNLVLEY 216 (468)
Q Consensus 142 ~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~--~~~~~~E~~il~~l~hpn--Iv~l~~~~~~~-~~~~~~~~~lv~e~ 216 (468)
.+.++.|....+|+... ++..+++|+.... ......|.+++..|.... +.+++...... ........+++++|
T Consensus 27 i~~~~~G~~n~~y~v~t--~~~~~vLK~~~~~~~~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~~~~l~e~ 104 (307)
T TIGR00938 27 LKGIAEGVENSNYLLTT--DVGRYILTLYEKRVKAEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGKPACLVEF 104 (307)
T ss_pred ccccCCccccceEEEEe--CCCcEEEEEecCCCCHHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCeEEEEEEe
Confidence 45677777789998864 3446778976543 234456778887775322 33433321000 00112346789999
Q ss_pred ccchHH---------HH---HhhhhhcCCCC--------CHHHH-----H----------HHHHHHHHHHHHhHh-----
Q 012233 217 ISETVY---------RV---SKHYTRMNQHV--------PILYV-----Q----------LYTYQICRALNYLHH----- 256 (468)
Q Consensus 217 ~~~~ll---------~~---~~~~~~~~~~~--------~~~~~-----~----------~~~~qi~~aL~yLH~----- 256 (468)
++|... .. +...-.....+ ..... . .....+...++++..
T Consensus 105 i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~l~~~~~~~ 184 (307)
T TIGR00938 105 LQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDKELDYLDKFWPRD 184 (307)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHHHHHHHHhhhhhc
Confidence 876211 00 00000000000 00000 0 001122334544531
Q ss_pred -cCCccccCCCCCCeeecCCCCcEEEeeecCcc
Q 012233 257 -VVGVCHRDIKPQNLLVNPHTHQLKICDFGSAK 288 (468)
Q Consensus 257 -~~givHrDlkp~NILl~~~~~~vkL~DFG~a~ 288 (468)
..+++|+|+.+.||+++.++ .+.|+||+.+.
T Consensus 185 ~~~~l~HgD~~~~Nvl~~~~~-~~~vIDfd~~~ 216 (307)
T TIGR00938 185 LPRGVIHADLFPDNVLFDGDS-VKGVIDFYFAC 216 (307)
T ss_pred CCCccCCCCCCcCcEEEECCc-eEEEeeccccc
Confidence 26899999999999999776 56899999874
No 479
>PRK05231 homoserine kinase; Provisional
Probab=97.14 E-value=0.0078 Score=59.12 Aligned_cols=30 Identities=30% Similarity=0.283 Sum_probs=25.5
Q ss_pred CCccccCCCCCCeeecCCCCcEEEeeecCcc
Q 012233 258 VGVCHRDIKPQNLLVNPHTHQLKICDFGSAK 288 (468)
Q Consensus 258 ~givHrDlkp~NILl~~~~~~vkL~DFG~a~ 288 (468)
.|+||+|+.|.|||++.+. ..-|+||+.+.
T Consensus 187 ~~liHgD~~~~Nil~~~~~-~~~iIDf~~~~ 216 (319)
T PRK05231 187 RGVIHADLFRDNVLFEGDR-LSGFIDFYFAC 216 (319)
T ss_pred cccCCCCCCCCcEEEECCc-eEEEEeccccc
Confidence 4899999999999998554 45799999875
No 480
>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]
Probab=97.10 E-value=0.00041 Score=70.12 Aligned_cols=204 Identities=19% Similarity=0.174 Sum_probs=125.3
Q ss_pred HHHHHHHcCCCCcccccceeeecCCCCceEEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCC
Q 012233 180 ELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVG 259 (468)
Q Consensus 180 E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~g 259 (468)
-..+++.+.|+|....+++--.. .....+|||+++-++.+...... ... .+++ | +|
T Consensus 32 r~~~lktl~~~~l~~yl~~~r~~----~~r~IVV~e~~~~Sled~~~~~~--l~~----------~s~~-~-------~~ 87 (725)
T KOG1093|consen 32 RFQYLKSLQHDNLCQYLDFSRGK----HERVIVVMEHYTMSLEDILKTGN--LKD----------ESLL-A-------HG 87 (725)
T ss_pred hhHHHHhhcCccceeeEeeecCc----cceEEEEehhhccchHHHHHhcc--cch----------hhhc-c-------cc
Confidence 46788999999999887754221 12377999999988777544311 110 0111 1 23
Q ss_pred ccccCCCCCCeeecCCCCcEEEeeecCccccCCCCCCccccccCCccccccccCCCCCCcchhHHHHHHHHHHHHhCCCC
Q 012233 260 VCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPL 339 (468)
Q Consensus 260 ivHrDlkp~NILl~~~~~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSlG~il~ell~G~~p 339 (468)
+.|- | .++++| -+... | |-. .++++||||+|.++.++..|...
T Consensus 88 ~~~~-----~--------~~~~td-~~~t~---------------~--~~~------~~pKsdVwsl~~i~~el~L~~~l 130 (725)
T KOG1093|consen 88 VLHL-----N--------IIYITD-HFLTK---------------Y--PSP------IGPKSDVWSLGFIILELYLGISL 130 (725)
T ss_pred ccee-----h--------hhhccc-ccccc---------------C--CCC------CCcchhhhhHHHHHHHHHHhhHH
Confidence 3221 1 233444 11100 0 111 12499999999999999999988
Q ss_pred CCCCCcHHHHHHHHHHhCCCCHHHHhhcCCCCccCCCCcccCCCcccccccCCCHHHHHHHHHhcccCCCCCCCHHHHhC
Q 012233 340 FPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACA 419 (468)
Q Consensus 340 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~s~~ell~ 419 (468)
+......++...+.+..-.+.......+. ..+...++....++..+|+-..|..||...++..
T Consensus 131 ~~~~~~s~~l~~i~k~~~~d~~~~~~a~e-----------------~~~~~~~d~~~~~~~~~c~~~~~~ir~l~~~~~k 193 (725)
T KOG1093|consen 131 EAELTESEYLEILLKYYTDDQELLSTAME-----------------HLIQLLADKKRLPLLKKCLWLEPIIRPLPMELSK 193 (725)
T ss_pred HHHHHHHHHHHHHHHhccCchhHHHHHHH-----------------HHHHHhhhHhHHHHhccCCccccccccchhHHhc
Confidence 87776666666665544333322211100 0122346777889999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCcccccCHHHH--hcCCHHHHHhcc
Q 012233 420 HPFFDDLRDPNTCLPNGRPLPTLFNFTAQEL--AGASNELRQRLI 462 (468)
Q Consensus 420 hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 462 (468)
|+-|.++-.--+. ...+++.++.+|++... .+.+--+|.+.+
T Consensus 194 ~~i~~ev~~~~t~-e~~~~L~~e~~~~~~~~r~~~~s~~lw~~~g 237 (725)
T KOG1093|consen 194 RCSFTEVYKDLTV-EMRAALRKEVANNDLFERLVENSYYLWKLAG 237 (725)
T ss_pred CccHHHHHhhhhH-HHHHhhcccccccHHHHHHHHHHHHHHHHhC
Confidence 9999987333333 66677777777774332 344444555543
No 481
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=96.96 E-value=0.0087 Score=59.10 Aligned_cols=69 Identities=23% Similarity=0.221 Sum_probs=43.1
Q ss_pred eecccCceEEEEEEEcCCCCEEEEEEeecc-----------cchHHHHHHHHHHcC--CC-CcccccceeeecCCCCceE
Q 012233 144 VVGTGSFGVVFQAKCLETGDSVAIKKVLQD-----------KRYKNRELQIMRLLN--HP-NVVSLKHCFFSTTEKDELY 209 (468)
Q Consensus 144 ~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~-----------~~~~~~E~~il~~l~--hp-nIv~l~~~~~~~~~~~~~~ 209 (468)
.||.|....||++.....++.|+||+-..- .....-|...|+... -| .+.++|.+ +...
T Consensus 2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~~-------D~e~ 74 (370)
T TIGR01767 2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFHF-------DTEM 74 (370)
T ss_pred cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEEE-------cccc
Confidence 579999999999997543368999964211 112234777777664 24 34445432 2223
Q ss_pred EEEEeecccc
Q 012233 210 LNLVLEYISE 219 (468)
Q Consensus 210 ~~lv~e~~~~ 219 (468)
..+|||+++.
T Consensus 75 ~~~vMEdL~~ 84 (370)
T TIGR01767 75 AVTVMEDLSH 84 (370)
T ss_pred ceehHhhCcc
Confidence 4589999964
No 482
>PLN02236 choline kinase
Probab=96.78 E-value=0.0096 Score=59.19 Aligned_cols=137 Identities=19% Similarity=0.258 Sum_probs=74.2
Q ss_pred eecccCceEEEEEEEcC----CCCEEEEEEeeccc---chHHHHHHHHHHcCCCCcc-cccceeeecCCCCceEEEEEee
Q 012233 144 VVGTGSFGVVFQAKCLE----TGDSVAIKKVLQDK---RYKNRELQIMRLLNHPNVV-SLKHCFFSTTEKDELYLNLVLE 215 (468)
Q Consensus 144 ~lG~G~fg~Vy~~~~~~----~g~~vaiK~~~~~~---~~~~~E~~il~~l~hpnIv-~l~~~~~~~~~~~~~~~~lv~e 215 (468)
.|-.|-.-.+|++.... .++.|++|+..... ....+|..+++.+..-++. ++++++ .+. .|.+
T Consensus 43 ~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~~idR~~E~~~~~~l~~~gl~P~~~~~~-----~~g----~v~e 113 (344)
T PLN02236 43 PLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVELFFDRDDEIRTFECMSRHGQGPRLLGRF-----PNG----RVEE 113 (344)
T ss_pred EcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCeeechHHHHHHHHHHHHcCCCCceEEEE-----CCc----eEEE
Confidence 45457778889887532 24678899775432 1235799999988644443 344443 211 4678
Q ss_pred cccchHHHH------------Hh-----hhhhc-CCC-CC-HHHHHHHHHHH-----------------HHHHHHh----
Q 012233 216 YISETVYRV------------SK-----HYTRM-NQH-VP-ILYVQLYTYQI-----------------CRALNYL---- 254 (468)
Q Consensus 216 ~~~~~ll~~------------~~-----~~~~~-~~~-~~-~~~~~~~~~qi-----------------~~aL~yL---- 254 (468)
|+.+..+.. .. |.... ... .. ...+..+..++ ...+..|
T Consensus 114 fi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~~~ 193 (344)
T PLN02236 114 FIHARTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEKEL 193 (344)
T ss_pred eeCCCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHHHh
Confidence 876532210 00 00000 001 11 22222332211 1111111
Q ss_pred Hh---cCCccccCCCCCCeeecCCCCcEEEeeecCccc
Q 012233 255 HH---VVGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (468)
Q Consensus 255 H~---~~givHrDlkp~NILl~~~~~~vkL~DFG~a~~ 289 (468)
.. ...++|+|+++.|||++.....+.|+||..+..
T Consensus 194 ~~~~~~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~ 231 (344)
T PLN02236 194 SGDDQEIGFCHNDLQYGNIMIDEETRAITIIDYEYASY 231 (344)
T ss_pred cccCCCceEEeCCCCcCcEEEeCCCCcEEEEeehhccc
Confidence 11 136899999999999986433799999998853
No 483
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=96.76 E-value=0.013 Score=57.10 Aligned_cols=69 Identities=19% Similarity=0.243 Sum_probs=42.2
Q ss_pred ceecccCceEEEEEEEcC------CCCEEEEEEeeccc---chHHHHHHHHHHcCCCCcc-cccceeeecCCCCceEEEE
Q 012233 143 RVVGTGSFGVVFQAKCLE------TGDSVAIKKVLQDK---RYKNRELQIMRLLNHPNVV-SLKHCFFSTTEKDELYLNL 212 (468)
Q Consensus 143 ~~lG~G~fg~Vy~~~~~~------~g~~vaiK~~~~~~---~~~~~E~~il~~l~hpnIv-~l~~~~~~~~~~~~~~~~l 212 (468)
+.|..|-...||+..... .++.+++|+..... ....+|..+++.+....+. +++.++ .+ .+
T Consensus 4 ~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~~~~~r~~E~~~~~~l~~~g~~P~~~~~~-----~~----~~ 74 (302)
T cd05156 4 SKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSVELLIDRERELVVFARLSERNLGPKLYGIF-----PN----GR 74 (302)
T ss_pred EEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCCcceechHHHHHHHHHHHhCCCCCceEEEe-----CC----Cc
Confidence 345566667888876432 25789999875432 3456799999988644433 333332 11 25
Q ss_pred Eeecccch
Q 012233 213 VLEYISET 220 (468)
Q Consensus 213 v~e~~~~~ 220 (468)
|+||+.|.
T Consensus 75 v~e~i~G~ 82 (302)
T cd05156 75 IEEFIPSR 82 (302)
T ss_pred hhheeCCC
Confidence 78887763
No 484
>PRK12396 5-methylribose kinase; Reviewed
Probab=96.73 E-value=0.01 Score=59.32 Aligned_cols=71 Identities=21% Similarity=0.237 Sum_probs=45.4
Q ss_pred eceecccCceEEEEEEEcCCCCEEEEEEeecc----------cchHHHHHHHHHHcC--CC-CcccccceeeecCCCCce
Q 012233 142 ERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD----------KRYKNRELQIMRLLN--HP-NVVSLKHCFFSTTEKDEL 208 (468)
Q Consensus 142 ~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~----------~~~~~~E~~il~~l~--hp-nIv~l~~~~~~~~~~~~~ 208 (468)
.+.||.|.-..||++.+...++.|+||+-..- .....-|.+.|+.+. -| ++.++|.+ +..
T Consensus 34 ~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~~-------D~e 106 (409)
T PRK12396 34 CKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYLF-------DSV 106 (409)
T ss_pred eeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEEE-------CcH
Confidence 45789999999999998444678999964211 112234788888764 34 45555432 222
Q ss_pred EEEEEeecccc
Q 012233 209 YLNLVLEYISE 219 (468)
Q Consensus 209 ~~~lv~e~~~~ 219 (468)
...+|||+++.
T Consensus 107 ~~~~vMEdL~~ 117 (409)
T PRK12396 107 MNCCVMEDLSD 117 (409)
T ss_pred HhhHHHHhCcc
Confidence 34589999964
No 485
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=96.72 E-value=0.015 Score=56.61 Aligned_cols=32 Identities=25% Similarity=0.429 Sum_probs=27.9
Q ss_pred CccccCCCCCCeeecCCCCcEEEeeecCccccC
Q 012233 259 GVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLV 291 (468)
Q Consensus 259 givHrDlkp~NILl~~~~~~vkL~DFG~a~~~~ 291 (468)
.++|+|+.+.||++++.+ -+-+.||+++..-.
T Consensus 199 ~lvHGD~~~gNlii~~~~-~~gVlDwe~~~lGD 230 (321)
T COG3173 199 VLVHGDYRPGNLIIDPGR-PTGVLDWELATLGD 230 (321)
T ss_pred eeeeCCcccCCEEEeCCC-eeEEEeccccccCC
Confidence 489999999999999888 48999999986543
No 486
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=96.68 E-value=0.027 Score=54.99 Aligned_cols=29 Identities=28% Similarity=0.602 Sum_probs=25.3
Q ss_pred CCccccCCCCCCeeecCCCCcEEEeeecCcc
Q 012233 258 VGVCHRDIKPQNLLVNPHTHQLKICDFGSAK 288 (468)
Q Consensus 258 ~givHrDlkp~NILl~~~~~~vkL~DFG~a~ 288 (468)
.+++|+|+.+.||+++. + .+.|+||+.+.
T Consensus 187 ~~liHgD~~~~Nil~~~-~-~i~lIDfd~~~ 215 (313)
T TIGR02906 187 RGFCHQDYAYHNILLKD-N-EVYVIDFDYCT 215 (313)
T ss_pred CceEcCCCCcccEEEeC-C-cEEEEECcccc
Confidence 58999999999999987 4 58999999764
No 487
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=96.53 E-value=0.013 Score=56.23 Aligned_cols=31 Identities=23% Similarity=0.485 Sum_probs=25.3
Q ss_pred CccccCCCCCCeeecCCCCcEEEeeecCccc
Q 012233 259 GVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (468)
Q Consensus 259 givHrDlkp~NILl~~~~~~vkL~DFG~a~~ 289 (468)
.++|+|++|.|||++.++.-.-|+||+.+..
T Consensus 186 ~lvHGD~~~~Nilv~~~~~~~gviDWe~a~i 216 (276)
T cd05152 186 VLVHGDLHPGHILIDEDARVTGLIDWTEAKV 216 (276)
T ss_pred eeEeCCCCCCcEEEeCCCCEEEEECcHhccc
Confidence 4899999999999997542356999998853
No 488
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=96.44 E-value=0.02 Score=56.61 Aligned_cols=30 Identities=27% Similarity=0.434 Sum_probs=25.5
Q ss_pred ccccCCCCCCeeecCCCCcEEEeeecCccc
Q 012233 260 VCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (468)
Q Consensus 260 ivHrDlkp~NILl~~~~~~vkL~DFG~a~~ 289 (468)
++|+|+.+.|||++.++..++++||+.|..
T Consensus 184 ~CHnDl~~~NiL~~~~~~~l~lID~EYag~ 213 (330)
T PLN02421 184 FAHNDLLSGNLMLNEDEGKLYFIDFEYGSY 213 (330)
T ss_pred EEECCCCcccEEEeCCCCcEEEEcccccCC
Confidence 789999999999975543799999998853
No 489
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=96.20 E-value=0.052 Score=53.10 Aligned_cols=31 Identities=13% Similarity=0.186 Sum_probs=27.1
Q ss_pred CCccccCCCCCCeeecCCCCcEEEeeecCccc
Q 012233 258 VGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (468)
Q Consensus 258 ~givHrDlkp~NILl~~~~~~vkL~DFG~a~~ 289 (468)
.++||+|+.+.|||++.++ .+.++||..+..
T Consensus 196 ~~lcHgD~~~~Nvl~~~~~-~~~iIDfd~~~~ 226 (309)
T TIGR02904 196 TVLVHGKLSLSHFLYDETR-GGYFINFEKASF 226 (309)
T ss_pred eeeeCCCCcHHhEEEcCCC-CEEEEEhhhccc
Confidence 3799999999999998877 689999998753
No 490
>PLN02756 S-methyl-5-thioribose kinase
Probab=96.09 E-value=0.092 Score=52.95 Aligned_cols=69 Identities=20% Similarity=0.266 Sum_probs=44.8
Q ss_pred eceecccCceEEEEEEEcCCCCEEEEEEeec-----------ccchHHHHHHHHHHcC---CCCcccccceeeecCCCCc
Q 012233 142 ERVVGTGSFGVVFQAKCLETGDSVAIKKVLQ-----------DKRYKNRELQIMRLLN---HPNVVSLKHCFFSTTEKDE 207 (468)
Q Consensus 142 ~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~-----------~~~~~~~E~~il~~l~---hpnIv~l~~~~~~~~~~~~ 207 (468)
.+.||.|....||+..+ .+..++||+-.. .......|...|+.+. ..++.+++.+. .+
T Consensus 37 ~~eiggGn~N~VyrV~~--~~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~d-----ed- 108 (418)
T PLN02756 37 IKEVGDGNLNFVYIVVS--SSGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFD-----RT- 108 (418)
T ss_pred EEEcCCCceeeEEEEEc--CCccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEEC-----CC-
Confidence 45789999999999886 355688996531 1122234666676654 24666676654 22
Q ss_pred eEEEEEeecccc
Q 012233 208 LYLNLVLEYISE 219 (468)
Q Consensus 208 ~~~~lv~e~~~~ 219 (468)
..+++|||+++
T Consensus 109 -~~vlvME~L~~ 119 (418)
T PLN02756 109 -MALIGMRYLEP 119 (418)
T ss_pred -CCEEEEeecCC
Confidence 24578999976
No 491
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=95.94 E-value=0.027 Score=55.10 Aligned_cols=106 Identities=15% Similarity=0.270 Sum_probs=70.6
Q ss_pred CCceEEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCCCCcEEEeee
Q 012233 205 KDELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPHTHQLKICDF 284 (468)
Q Consensus 205 ~~~~~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~~~~vkL~DF 284 (468)
....|.|++|++-++.+... ....+.++..++.+.+..++-|.....+-|||+...||||+ +| +|-|+||
T Consensus 296 de~~y~yl~~kdhgt~is~i--------k~~~~~e~lsff~s~~sil~~lekkf~fehrnlt~~niLId-~G-nvtLIDf 365 (488)
T COG5072 296 DETLYLYLHFKDHGTPISII--------KADRSEEELSFFWSCISILDILEKKFPFEHRNLTLDNILID-EG-NVTLIDF 365 (488)
T ss_pred CCceEEEEEEecCCceeeee--------ecccHHHHHHHHHHHHHHHhhhhhcCCcccccccccceeee-cC-ceEEEEe
Confidence 34568999999987654421 22345667788888888888887646789999999999999 77 7999999
Q ss_pred cCccccCCCCCCccccccCCccccccccCCCCCCcchhHHHH
Q 012233 285 GSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSI 326 (468)
Q Consensus 285 G~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwSl 326 (468)
-+++.-.+.. .+.-...--|-.+.|.. +..-+||-+
T Consensus 366 klsRl~~~q~----~isy~rldhp~lF~G~d--d~QFeIYrl 401 (488)
T COG5072 366 KLSRLSYSQG----IISYNRLDHPDLFNGVD--DYQFEIYRL 401 (488)
T ss_pred eeeecccCCc----eeeccccCchhhhcCcc--ceeeeHHHH
Confidence 9998432221 11112223344444332 555667664
No 492
>PTZ00384 choline kinase; Provisional
Probab=95.22 E-value=0.18 Score=50.88 Aligned_cols=30 Identities=30% Similarity=0.376 Sum_probs=25.0
Q ss_pred CCccccCCCCCCeeecCCCCcEEEeeecCccc
Q 012233 258 VGVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (468)
Q Consensus 258 ~givHrDlkp~NILl~~~~~~vkL~DFG~a~~ 289 (468)
...+|.|+-+.|||.+.+ .+.++||..|..
T Consensus 227 ~VfCHNDL~~gNIL~~~~--~l~lID~EYA~~ 256 (383)
T PTZ00384 227 VLFCHNDLFFTNILDFNQ--GIYFIDFDFAGF 256 (383)
T ss_pred eeeeeccCCcccEEecCC--CEEEEEeccccC
Confidence 467999999999998754 499999998753
No 493
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=95.06 E-value=0.21 Score=49.16 Aligned_cols=137 Identities=18% Similarity=0.211 Sum_probs=72.9
Q ss_pred CceEEEEEEEcCCCCEEEEEEeecc--cchHHHHHHHHHHcCCCC------cccccceeeecCCCCceEEEEEeecccch
Q 012233 149 SFGVVFQAKCLETGDSVAIKKVLQD--KRYKNRELQIMRLLNHPN------VVSLKHCFFSTTEKDELYLNLVLEYISET 220 (468)
Q Consensus 149 ~fg~Vy~~~~~~~g~~vaiK~~~~~--~~~~~~E~~il~~l~hpn------Iv~l~~~~~~~~~~~~~~~~lv~e~~~~~ 220 (468)
.-..||+... .+..+++|+.... ......|...|+.|.-.. +..+-+-........ .+.+-|++|++|.
T Consensus 37 ~eN~~f~~~~--~~g~~iLki~~~~~~~~~i~~el~~l~~La~~~i~v~~Pl~~~dG~~l~~~~~~-~r~a~lf~~l~G~ 113 (331)
T COG2334 37 EENSNFRVQT--EDGRYILKIYRPGWTRAEIPFELALLQHLAERGIPVPAPLPSLDGELLEALSGG-PRPAALFEYLPGR 113 (331)
T ss_pred ccCceEEEEe--cCCCeEEEEecCCCCHHHHHHHHHHHHHHHHcCCCCCCCccCCCcchhhhccCC-ceeEEEEEecCCc
Confidence 4456888875 3344588988664 334456777777774222 222222221111111 3567889999875
Q ss_pred HHHH------H--------------hhhh--hcC--CCCCHH----H---------HHHHHHHHHHHHHHhHh-------
Q 012233 221 VYRV------S--------------KHYT--RMN--QHVPIL----Y---------VQLYTYQICRALNYLHH------- 256 (468)
Q Consensus 221 ll~~------~--------------~~~~--~~~--~~~~~~----~---------~~~~~~qi~~aL~yLH~------- 256 (468)
.+.. + +.+. +.. ....+. . -.....++...+..+..
T Consensus 114 ~~~~~~~~~~~~~lG~~LgrlH~a~~~f~~~~p~~~~~~~w~~~~~~~~~~~~~~~~~~l~a~~~~~~~~~~~~~~~~lp 193 (331)
T COG2334 114 PLERDDNAEQLEELGRMLGRLHLALRGFPFERPNALRRLEWDILEPRALLRLDLVEPEDLRAALLAALDRLLARLPAHLP 193 (331)
T ss_pred CcCCCCcHHHHHHHHHHHHHHHHHhCcCCccCCCcccccchhhhcchhhhhhcccCchhhHHHHHHHHHHHHhhchhhCC
Confidence 4441 0 0000 000 001111 0 00122344444544442
Q ss_pred cCC--ccccCCCCCCeeecCCCCcEEEeeecCcc
Q 012233 257 VVG--VCHRDIKPQNLLVNPHTHQLKICDFGSAK 288 (468)
Q Consensus 257 ~~g--ivHrDlkp~NILl~~~~~~vkL~DFG~a~ 288 (468)
..+ +||+|+.|.|||++.+...+.++|||-+.
T Consensus 194 ~~~~~iIH~D~~~~NVl~d~~~~~~g~iDFdDa~ 227 (331)
T COG2334 194 ALGDQIIHGDLHPDNVLFDDDTDVSGFIDFDDAG 227 (331)
T ss_pred cccceeeecCCCccceeEcCCCCeeeEEEccccc
Confidence 124 99999999999999776227899999874
No 494
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=94.45 E-value=0.25 Score=47.75 Aligned_cols=72 Identities=15% Similarity=0.129 Sum_probs=43.5
Q ss_pred eceecccCceEEEEEEEcCCCCEEEEEEeecc-cchHHHHHHHHHHcC---CCCcccccceeeecCCCCceEEEEEeecc
Q 012233 142 ERVVGTGSFGVVFQAKCLETGDSVAIKKVLQD-KRYKNRELQIMRLLN---HPNVVSLKHCFFSTTEKDELYLNLVLEYI 217 (468)
Q Consensus 142 ~~~lG~G~fg~Vy~~~~~~~g~~vaiK~~~~~-~~~~~~E~~il~~l~---hpnIv~l~~~~~~~~~~~~~~~~lv~e~~ 217 (468)
.+.|+.|....+|+.. .+++.+.||+-... ...+..|.+-|+.|. --.+.+++.+...... -||||||+
T Consensus 22 ~~~v~GG~i~~a~~~~--~~~~~~FvK~~~~~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~-----~fLlle~l 94 (288)
T PF03881_consen 22 IEPVSGGDINEAYRLD--TDGGSYFVKVNSESGRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDD-----AFLLLEFL 94 (288)
T ss_dssp EEEE--SSSSEEEEEE--TTS-EEEEEEEEGGGCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSC-----CEEEEE--
T ss_pred eEecCCCChhheEEEE--CCCccEEEEecChhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCC-----ceEEEEee
Confidence 3568889999999987 57888999977643 456778999898884 3345566665533221 37999998
Q ss_pred cch
Q 012233 218 SET 220 (468)
Q Consensus 218 ~~~ 220 (468)
..+
T Consensus 95 ~~~ 97 (288)
T PF03881_consen 95 EMG 97 (288)
T ss_dssp ---
T ss_pred cCC
Confidence 744
No 495
>KOG2269 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=93.01 E-value=0.093 Score=50.67 Aligned_cols=93 Identities=20% Similarity=0.208 Sum_probs=64.3
Q ss_pred HHHHHHHHcC-----CCCcccccceeeecCCCCceEEEEEeecccchHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHH
Q 012233 179 RELQIMRLLN-----HPNVVSLKHCFFSTTEKDELYLNLVLEYISETVYRVSKHYTRMNQHVPILYVQLYTYQICRALNY 253 (468)
Q Consensus 179 ~E~~il~~l~-----hpnIv~l~~~~~~~~~~~~~~~~lv~e~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~y 253 (468)
+|+.-|.+++ +|-+|.|... .|||-|++..-+. .-...+-.++-.+.+..-.|+..++.-
T Consensus 334 kEmhNL~RMq~~GlpcP~vV~lkkh------------vLVMsFiGd~~~a---APkLK~v~l~d~E~~~aY~q~~~~M~~ 398 (531)
T KOG2269|consen 334 KEMHNLSRMQKHGLPCPQVVKLKKH------------VLVMSFIGDQGLA---APKLKNVELTDDERRNAYDQVQSIMCR 398 (531)
T ss_pred HHHHHHHHHHhcCCCCCceeeeecc------------eEEEEeecCCCCC---CccccccccChHHHHHHHHHHHHHHHH
Confidence 4555555553 5777766432 3899999854221 111123446667777777899988888
Q ss_pred hHhcCCccccCCCCCCeeecCCCCcEEEeeecCcc
Q 012233 254 LHHVVGVCHRDIKPQNLLVNPHTHQLKICDFGSAK 288 (468)
Q Consensus 254 LH~~~givHrDlkp~NILl~~~~~~vkL~DFG~a~ 288 (468)
|-..+-.||.||.--|+|...+ .|-++|..-+.
T Consensus 399 lY~Ec~LVHADlSEyN~Lw~~g--Kvw~IDVsQsv 431 (531)
T KOG2269|consen 399 LYKECLLVHADLSEYNLLWTPG--KVWVIDVSQSV 431 (531)
T ss_pred HHHhhheeecchhhhhheecCC--ceEEEechhcc
Confidence 7433789999999999999976 59999987663
No 496
>PTZ00296 choline kinase; Provisional
Probab=92.93 E-value=1.3 Score=45.55 Aligned_cols=71 Identities=13% Similarity=0.147 Sum_probs=43.7
Q ss_pred EeceecccCceEEEEEEEcCC--------CCEEEEEEeeccc---chHHHHHHHHHHcCCCCcc-cccceeeecCCCCce
Q 012233 141 AERVVGTGSFGVVFQAKCLET--------GDSVAIKKVLQDK---RYKNRELQIMRLLNHPNVV-SLKHCFFSTTEKDEL 208 (468)
Q Consensus 141 ~~~~lG~G~fg~Vy~~~~~~~--------g~~vaiK~~~~~~---~~~~~E~~il~~l~hpnIv-~l~~~~~~~~~~~~~ 208 (468)
-.+.|..|-.-.+|++..... ++.|.+++.-... .....|..+++.+..-+|- ++++.+ .
T Consensus 109 ~i~~l~gGlTN~~f~v~~~~~~~~~~~~~~~~~lvRiyG~~te~lIdR~~E~~v~~~ls~~gi~P~l~~~f-----~--- 180 (442)
T PTZ00296 109 RVNQILSGLTNQLFEVSLKEETANNYPSIRRRVLFRIYGKDVDELYNPISEFEVYKTMSKYRIAPQLLNTF-----S--- 180 (442)
T ss_pred EEEEecCcccCceEEEEecCCCCccccCcCceEEEEecCCCccceeCHHHHHHHHHHHHHCCCCCceEEEe-----C---
Confidence 445566777778888875421 5678888774432 2345688888888754444 344443 2
Q ss_pred EEEEEeecccch
Q 012233 209 YLNLVLEYISET 220 (468)
Q Consensus 209 ~~~lv~e~~~~~ 220 (468)
-+.|.+|+.|.
T Consensus 181 -gg~I~efi~g~ 191 (442)
T PTZ00296 181 -GGRIEEWLYGD 191 (442)
T ss_pred -CCEEEEeeCCc
Confidence 12478888764
No 497
>PHA03111 Ser/Thr kinase; Provisional
Probab=92.12 E-value=0.18 Score=48.93 Aligned_cols=38 Identities=24% Similarity=0.326 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHHHHh---HhcCCccccCCCCCCeeecCC
Q 012233 238 LYVQLYTYQICRALNYL---HHVVGVCHRDIKPQNLLVNPH 275 (468)
Q Consensus 238 ~~~~~~~~qi~~aL~yL---H~~~givHrDlkp~NILl~~~ 275 (468)
..++.++.||+.-.-.. -...+++|-||||+||||-+.
T Consensus 279 ~YikfifLQiaLLyikIYelp~c~nF~H~DLKPdNILiFds 319 (444)
T PHA03111 279 EYIKFIFLQIALLYIKIYELPCCDNFLHVDLKPDNILIFDS 319 (444)
T ss_pred HHHHHHHHHHHHHHHhhhcCCCcceeeeccCCCCcEEEecC
Confidence 44777888987644233 212479999999999998433
No 498
>PRK10271 thiK thiamine kinase; Provisional
Probab=92.09 E-value=0.12 Score=46.35 Aligned_cols=29 Identities=24% Similarity=0.335 Sum_probs=25.0
Q ss_pred CccccCCCCCCeeecCCCCcEEEeeecCccc
Q 012233 259 GVCHRDIKPQNLLVNPHTHQLKICDFGSAKM 289 (468)
Q Consensus 259 givHrDlkp~NILl~~~~~~vkL~DFG~a~~ 289 (468)
-.+|+|+.|.||+++.++ ++|+||+.+..
T Consensus 78 ~p~H~D~~~~N~~~~~~~--~~lIDwe~a~~ 106 (188)
T PRK10271 78 APLHMDVHAGNLVHSASG--LRLIDWEYAGD 106 (188)
T ss_pred eeecCCCCCccEEEECCC--EEEEeCCcccC
Confidence 468999999999998665 89999999854
No 499
>PF05445 Pox_ser-thr_kin: Poxvirus serine/threonine protein kinase; InterPro: IPR008790 This family of proteins contain poxvirus serine/threonine protein kinases, which are essential for phosphorylation of virion proteins during virion assembly. ; GO: 0004672 protein kinase activity, 0005524 ATP binding
Probab=92.04 E-value=0.16 Score=49.39 Aligned_cols=52 Identities=25% Similarity=0.339 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHHHH---HhHhcCCccccCCCCCCeeecCCCC-----------------cEEEeeecCccc
Q 012233 238 LYVQLYTYQICRALN---YLHHVVGVCHRDIKPQNLLVNPHTH-----------------QLKICDFGSAKM 289 (468)
Q Consensus 238 ~~~~~~~~qi~~aL~---yLH~~~givHrDlkp~NILl~~~~~-----------------~vkL~DFG~a~~ 289 (468)
..++.++.||+.-.- -|-....++|-||||+||||-+... .++|.||.+|..
T Consensus 275 ~YvkfifLQiaLLyikIYelp~c~nF~H~DLKPdNILiFds~~~i~I~~~~~~~vF~Epi~~~LnDFDfSqv 346 (434)
T PF05445_consen 275 EYVKFIFLQIALLYIKIYELPCCTNFLHVDLKPDNILIFDSKEPIRIKFGNRNYVFKEPIRCCLNDFDFSQV 346 (434)
T ss_pred HHHHHHHHHHHHHHeeeecCCCcceeeecccCcCcEEEecCCCceEEEECCeEEEecccceeeecccCHHHh
Confidence 446778888864321 1222357999999999999843221 356778888754
No 500
>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]
Probab=91.96 E-value=0.34 Score=48.39 Aligned_cols=61 Identities=28% Similarity=0.249 Sum_probs=36.6
Q ss_pred EEEEeecccch-HHHHHhhhhhcCCCCCHHHHHHHHHHHHHHHHHhHhcCCccccCCCCCCeeecCC
Q 012233 210 LNLVLEYISET-VYRVSKHYTRMNQHVPILYVQLYTYQICRALNYLHHVVGVCHRDIKPQNLLVNPH 275 (468)
Q Consensus 210 ~~lv~e~~~~~-ll~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~givHrDlkp~NILl~~~ 275 (468)
..|+-+|..|- +...+. ....++...+.++.-.+.||--+--..+++|.|+.|.||++..+
T Consensus 320 ~vl~E~~~~Gl~v~~~v~-----~~~~pe~l~kkva~lg~~AllkMl~vDNFvHaDlHPGNVlirf~ 381 (565)
T KOG1236|consen 320 LVLVETYERGLSVLRFVK-----WKSQPEALVKKVAKLGVNALLKMLIVDNFVHADLHPGNVLIRFN 381 (565)
T ss_pred ceeeeeccccccHHhhhh-----cccChHHHHHHHHHHHHHHHHHHHHhhcceecccCCCcEEEEec
Confidence 33555666553 222222 23345555666666566665544434689999999999998533
Done!