BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>012235
MRRSCFPKFRLSRAMAWLQLVLGGLVIVVSISSLFRFYAAGFFMHNEDICLHFYSVKDVY
DGFDIRALSDRVGEVLNRMESLQDKLEKTVQQLEKEKDALDKTITRLEYKNFLEVEVIRP
LYSAHIALRQIRLPKAEGIGNFTMEEEPLINTFVTEEIRKYITPKKNRVGKVNIYGAEKI
HNTIGHACVLMKKELEEYMDYDIGSYCKDDWNLAQKLMVNGCDPLPRRRCLTRASKVYQK
PFPINESLWKLPDGRNVRWSNYQCRNFECLSSKNPKRGYSKCTGCFEMDKEKPKWVANRS
VPVDFLISDILAIKPGETRIGLDFGVGTGTFAARMREQNVTIVSTALNLGAPFNEMIALR
GLIPLYVTLNQRLPFFDNTMDLIHTTGFMDGWLDMLLLDFILFDWDRILRPGGLLWIDRF
FCNKKDLDDYMYMFLQFRYKKHKWAISPKSKDEVYLSALLEKPPRAI

High Scoring Gene Products

Symbol, full name Information P value
AT3G05390 protein from Arabidopsis thaliana 2.0e-182
AT4G01240 protein from Arabidopsis thaliana 2.7e-107
AT5G40830 protein from Arabidopsis thaliana 7.9e-62
AT3G27230 protein from Arabidopsis thaliana 7.1e-61
AT1G29790 protein from Arabidopsis thaliana 6.2e-46

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  012235
        (467 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2079812 - symbol:AT3G05390 species:3702 "Arabi...  1770  2.0e-182  1
TAIR|locus:2125028 - symbol:AT4G01240 species:3702 "Arabi...  1061  2.7e-107  1
TAIR|locus:2164491 - symbol:AT5G40830 species:3702 "Arabi...   632  7.9e-62   1
TAIR|locus:2086543 - symbol:AT3G27230 species:3702 "Arabi...   623  7.1e-61   1
TAIR|locus:2019312 - symbol:AT1G29790 species:3702 "Arabi...   482  6.2e-46   1


>TAIR|locus:2079812 [details] [associations]
            symbol:AT3G05390 species:3702 "Arabidopsis thaliana"
            [GO:0005794 "Golgi apparatus" evidence=ISM] [GO:0008168
            "methyltransferase activity" evidence=IEA] InterPro:IPR004159
            Pfam:PF03141 EMBL:CP002686 GO:GO:0008168 GO:GO:0032259
            EMBL:AC009606 EMBL:AY649290 IPI:IPI00528935 RefSeq:NP_187190.1
            UniGene:At.43378 UniGene:At.50756 ProteinModelPortal:Q9MA52
            SMR:Q9MA52 EnsemblPlants:AT3G05390.1 GeneID:819703
            KEGG:ath:AT3G05390 TAIR:At3g05390 InParanoid:Q9MA52 OMA:LQFRYKK
            PhylomeDB:Q9MA52 ProtClustDB:CLSN2684484 Genevestigator:Q9MA52
            Uniprot:Q9MA52
        Length = 463

 Score = 1770 (628.1 bits), Expect = 2.0e-182, P = 2.0e-182
 Identities = 327/468 (69%), Positives = 378/468 (80%)

Query:     1 MRRSCFPKFRLSRAMAWLQXXXXXXXXXXXXXXXFRFYAAGFFMHNEDICLHFYSVKDVY 60
             M R+C P++RL R MA LQ               +RF++ G+F+ NED C + Y++K+V 
Sbjct:     1 MGRTCLPRWRLGRLMAGLQVILGLLVITVSLSCLYRFHSVGYFLQNEDTCNNIYTIKEVS 60

Query:    61 -DGFDIRALSDRVGEVLNRMESLQDKLEKTVQQLEKEKDALDKTITRLEYKNFLEVEVIR 119
              +GFD++AL DRV EVL +M++L +KLEKTV+ +EK KD   K     E K FLE EV++
Sbjct:    61 SEGFDLKALHDRVDEVLEKMDNLYEKLEKTVKDMEKSKDGSKK-----EMKKFLEDEVMK 115

Query:   120 PLYSAHIALRQIRLPKAEGIGNFTMEEEPLINTFVTEEIRKYITPKKNRVGKVNIYGAEK 179
             P Y AHI LRQIRLPK EGI N T +EEPLIN F+ EEIR+YITPK+NRVGK+N++G E+
Sbjct:   116 PFYYAHIGLRQIRLPKPEGIRNSTEKEEPLINKFLIEEIRQYITPKENRVGKINMFGTER 175

Query:   180 IHNTIGHACVLMKKELEEYMDYDIGSYCKDDWNLAQKLMVNGCDPLPRRRCLTRASKVYQ 239
             ++NTIGHAC LMK ELE+YMDYD+G+YC DDWNLAQKLM+NGCDPLPRRRCLTRAS  YQ
Sbjct:   176 VYNTIGHACALMKMELEKYMDYDVGAYCDDDWNLAQKLMLNGCDPLPRRRCLTRASMTYQ 235

Query:   240 KPFPINESLWKLPDGRNVRWSNYQCRNFECLSSKNPKRGYSKCTGCFEMDKEKPKWVANR 299
             KP+PINESLWKLPD RNVRW NYQCRNF CLSSKNPKRGY+KC+GCFEM+KEK KWV N 
Sbjct:   236 KPYPINESLWKLPDDRNVRWGNYQCRNFACLSSKNPKRGYTKCSGCFEMEKEKDKWVKNS 295

Query:   300 SVPVDFLISDILAIKPGETRIGLDFGVGTGTFAARMREQNVTIVSTALNLGAPFNEMIAL 359
             S+ VDF+I D+L +KP E RIGLD+GVGTGTFAARMRE+NVTIV+TALNLGAPFNEMIAL
Sbjct:   296 SLLVDFMIEDVLRVKPSEIRIGLDYGVGTGTFAARMREKNVTIVTTALNLGAPFNEMIAL 355

Query:   360 RGLIPLYVTLNQRLPFFDNTMDLIHTTGFMDGXXXXXXXXXXXXXXXXXXRPGGLLWIDR 419
             RGLIPLY++LNQRLPFFDNTMD+IHTTG MDG                  RPGGLLWIDR
Sbjct:   356 RGLIPLYISLNQRLPFFDNTMDMIHTTGLMDGWIDLLLMDFVLYDWDRVLRPGGLLWIDR 415

Query:   420 FFCNKKDLDDYMYMFLQFRYKKHKWAISPKSKDEVYLSALLEKPPRAI 467
             FFC KKDLDDYMYMFLQFRYKKHKWAISPKSKDEVYLSALLEKPPRAI
Sbjct:   416 FFCKKKDLDDYMYMFLQFRYKKHKWAISPKSKDEVYLSALLEKPPRAI 463


>TAIR|locus:2125028 [details] [associations]
            symbol:AT4G01240 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0008168 "methyltransferase
            activity" evidence=IEA] InterPro:IPR004159 Pfam:PF03141
            EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0008168 EMBL:AL161491
            HOGENOM:HOG000240829 IPI:IPI00525352 PIR:C85016 RefSeq:NP_192033.1
            UniGene:At.54074 ProteinModelPortal:Q9M144 SMR:Q9M144
            EnsemblPlants:AT4G01240.1 GeneID:827909 KEGG:ath:AT4G01240
            TAIR:At4g01240 InParanoid:Q9M144 OMA:GHACFAM PhylomeDB:Q9M144
            ProtClustDB:CLSN2722659 ArrayExpress:Q9M144 Genevestigator:Q9M144
            Uniprot:Q9M144
        Length = 659

 Score = 1061 (378.5 bits), Expect = 2.7e-107, P = 2.7e-107
 Identities = 199/324 (61%), Positives = 235/324 (72%)

Query:   153 FVTEEIRKYITPKKNRVGKVNIYGAEKIHNTIGHACVLMKKELEEYMDYDIGSYCKDDWN 212
             F+ EEI+KYI  K NR+GK N  GA     +IGHAC  MKK+LEEYMDYD+G  C DDW 
Sbjct:   333 FMREEIKKYIKIKPNRLGKQNFMGANGTFTSIGHACFAMKKDLEEYMDYDVGEICNDDWR 392

Query:   213 LAQKLMVNGCDPLPRRRCLTRASKVYQKPFPINESLWKLPDGRNVRWSNYQCRNFECLSS 272
             LAQKLMV+GCDPLPRRRC +R  ++Y KPFPINESLWKLPD RNVRW  Y+C+NF CL+S
Sbjct:   393 LAQKLMVHGCDPLPRRRCFSRGPQLYHKPFPINESLWKLPDNRNVRWGQYKCKNFACLAS 452

Query:   273 KNPKR-GYSKCTGCFEMDK-EKPKWVANRSV-P-----VDFLISDILAIKPGETRIGLDF 324
                 R G+ KCT CF +   E P+W+    + P      DF I+++L IKPGE RIGLDF
Sbjct:   453 NTTARKGFFKCTDCFNLTHHESPRWLNRGEIDPETNQTADFSIAEVLEIKPGEIRIGLDF 512

Query:   325 GVGTGTFAARMREQNVTIVSTALNLGAPFNEMIALRGLIPLYVTLNQRLPFFDNTMDLIH 384
              +GTGTFAARMREQNVTIVS  +NLGAPFNEMIALRGL+PLY+T+NQRLPFFD+T+D+IH
Sbjct:   513 SIGTGTFAARMREQNVTIVSATINLGAPFNEMIALRGLVPLYLTVNQRLPFFDSTLDMIH 572

Query:   385 TTGFMDGXXXXXXXXXXXXXXXXXXRPGGLLWIDRFFCNKKDLDDYMYMFLQFRYKKHKW 444
             TT F+DG                  RPGGLLWID FFC K+D+ DYM  F   RY+KHKW
Sbjct:   573 TTRFLDGWIDLILLDFVLFDWDRVLRPGGLLWIDGFFCLKEDVSDYMEAFKALRYRKHKW 632

Query:   445 AISPKS-KD--EVYLSALLEKPPR 465
              + PK  KD  EV+ SA+LEKPPR
Sbjct:   633 VVVPKKDKDDKEVFFSAVLEKPPR 656


>TAIR|locus:2164491 [details] [associations]
            symbol:AT5G40830 species:3702 "Arabidopsis thaliana"
            [GO:0005794 "Golgi apparatus" evidence=ISM] [GO:0008168
            "methyltransferase activity" evidence=IEA] InterPro:IPR004159
            Pfam:PF03141 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0008168
            EMBL:AB011477 HOGENOM:HOG000240829 EMBL:BT002476 EMBL:BT008498
            IPI:IPI00537450 RefSeq:NP_001031989.1 RefSeq:NP_198899.1
            UniGene:At.30267 ProteinModelPortal:Q9FKS3 SMR:Q9FKS3 PRIDE:Q9FKS3
            EnsemblPlants:AT5G40830.1 EnsemblPlants:AT5G40830.2 GeneID:834083
            KEGG:ath:AT5G40830 TAIR:At5g40830 InParanoid:Q9FKS3 OMA:HASNGLD
            PhylomeDB:Q9FKS3 ProtClustDB:CLSN2686196 ArrayExpress:Q9FKS3
            Genevestigator:Q9FKS3 Uniprot:Q9FKS3
        Length = 414

 Score = 632 (227.5 bits), Expect = 7.9e-62, P = 7.9e-62
 Identities = 136/358 (37%), Positives = 205/358 (57%)

Query:   117 VIRPLYSAHIALRQIRLPKAEGIGNFTMEEEPLINTFVTEEIRKYITPKKNRVGKVNIYG 176
             ++R + S+H  L Q+   + + IG  +++   L    V +E++ ++   +  +GK +  G
Sbjct:    71 ILREIDSSHHTLTQM---EKQIIGYESLD---LSQQEVPQELKLFLQQHQLPLGKDSRTG 124

Query:   177 AEKIHNTIGHACVLMKKELEEYMDYDIGSYCKDDWNLAQKLMVNGCDPLPRRRCLTRASK 236
               ++  ++GH+C +    L +YM Y++   C DDW+LAQKL++  C+PLPRRRCL   +K
Sbjct:   125 ITQMVASVGHSCEMSLDLLSQYMSYNVFEKCPDDWSLAQKLILRACEPLPRRRCL---AK 181

Query:   237 VYQKP----FPINESLWKLPDGRNVRWSNYQCRNFECLSSKNPKRGYSKCTGCFEM--DK 290
                KP    FP  +SLW+     +V WS   C++FECL  K   R    C GCF++    
Sbjct:   182 TVHKPGLALFP--DSLWRPVGNSSVNWSGLGCKSFECLKGKKLSRD---CVGCFDLATSH 236

Query:   291 EKPKWVANRSVPVDFLISDILAIKPGETRIGLDFGVGTGTFAARMREQNVTIVSTALNLG 350
             EK ++V       DFLI D+L +  G+ RIG D   G+GTFAARM E+NV I+S  LN+ 
Sbjct:   237 EKDRFVKVNG-KTDFLIDDVLDLGDGKIRIGFDISSGSGTFAARMAEKNVNIISNTLNID 295

Query:   351 APFNEMIALRGLIPLYVTLNQRLPFFDNTMDLIHTTGFMDGXXXXX--XXXXXXXXXXXX 408
             APF+E IA RG+ PL+++L+QRLPF+DN  DLIH +  +D                    
Sbjct:   296 APFSEFIAARGIFPLFMSLDQRLPFYDNVFDLIHASNGLDLAVSNKPEKLEFLMFDLDRI 355

Query:   409 XRPGGLLWIDRFFCNKKDLDDYMYMFLQ-FRYKKHKWAISPKSKDEVYLSALLEKPPR 465
              +PGGL W+D F+C   +    +   ++ F YKK KW +  K+  EV+LSA+L+KP R
Sbjct:   356 LKPGGLFWLDNFYCGNDEKKRVLTRLIERFGYKKLKWVVGEKTDAEVFLSAVLQKPAR 413


>TAIR|locus:2086543 [details] [associations]
            symbol:AT3G27230 species:3702 "Arabidopsis thaliana"
            [GO:0005794 "Golgi apparatus" evidence=ISM;IDA] [GO:0008168
            "methyltransferase activity" evidence=IEA] [GO:0005768 "endosome"
            evidence=IDA] [GO:0005802 "trans-Golgi network" evidence=IDA]
            InterPro:IPR004159 Pfam:PF03141 GO:GO:0005794 EMBL:CP002686
            GO:GO:0005768 GO:GO:0005802 GO:GO:0008168 EMBL:AP000381
            ProtClustDB:CLSN2686196 EMBL:BT020522 EMBL:BT021996 IPI:IPI00528503
            RefSeq:NP_566813.1 UniGene:At.37097 ProteinModelPortal:Q9LK30
            SMR:Q9LK30 PRIDE:Q9LK30 EnsemblPlants:AT3G27230.1 GeneID:822342
            KEGG:ath:AT3G27230 TAIR:At3g27230 InParanoid:Q9LK30 OMA:DNFYCAN
            PhylomeDB:Q9LK30 Genevestigator:Q9LK30 Uniprot:Q9LK30
        Length = 410

 Score = 623 (224.4 bits), Expect = 7.1e-61, P = 7.1e-61
 Identities = 122/314 (38%), Positives = 183/314 (58%)

Query:   154 VTEEIRKYITPKKNRVGKVNIYGAEKIHNTIGHACVLMKKELEEYMDYDIGSYCKDDWNL 213
             +  E++ ++   +  +GK +  G  ++ +++GH+C      L +YM Y +   C DDW+L
Sbjct:   102 IVPELKLFLQRHQLPLGKDSRTGITEMVSSVGHSCGKSTDLLSQYMSYKVFDRCPDDWSL 161

Query:   214 AQKLMVNGCDPLPRRRCLTRASKVYQKPFPINESLWKLPDGRNVRWSNYQCRNFECLSSK 273
              QKL++  C+PLPRRRCL +  +  Q      +SLW+    ++V WS   C++F+CL  K
Sbjct:   162 GQKLILRACEPLPRRRCLAKTVQK-QDLSKSPDSLWRSVSNKSVNWSGLGCKSFDCLKGK 220

Query:   274 NPKRGYSKCTGCFEMDKEKPKWVANRSVPVDFLISDILAIKPGETRIGLDFGVGTGTFAA 333
                +   +C GCF++  EK ++V  +    DFLI D+L +  G+ RIG D   G+GTFAA
Sbjct:   221 KLSK---ECVGCFDLGVEKDRFVKVKGKN-DFLIDDVLGLGSGKIRIGFDISGGSGTFAA 276

Query:   334 RMREQNVTIVSTALNLGAPFNEMIALRGLIPLYVTLNQRLPFFDNTMDLIHTTGFMDGXX 393
             RM E+NVT+++  LN GAPF+E IA RGL PL+++L+ R PF DN  DLIH +  +D   
Sbjct:   277 RMAEKNVTVITNTLNNGAPFSEFIAARGLFPLFLSLDHRFPFLDNVFDLIHASSGLDVEG 336

Query:   394 XXXXXXXXXXXXXXXXRPGGLLWIDRFFC-NKKDLDDYMYMFLQFRYKKHKWAISPKSKD 452
                             +P GL W+D F+C N +   +   M  +F YKK KW I  K+  
Sbjct:   337 KAEKLEFLMFDLDRVLKPRGLFWLDNFYCANDEKKKELTRMIERFGYKKLKWVIGEKADA 396

Query:   453 EVYLSALLEKPPRA 466
             +VYLSA+L+KP RA
Sbjct:   397 QVYLSAVLQKPVRA 410


>TAIR|locus:2019312 [details] [associations]
            symbol:AT1G29790 species:3702 "Arabidopsis thaliana"
            [GO:0005794 "Golgi apparatus" evidence=ISM;IDA] [GO:0008168
            "methyltransferase activity" evidence=IEA] [GO:0005886 "plasma
            membrane" evidence=IDA] [GO:0005768 "endosome" evidence=IDA]
            [GO:0005802 "trans-Golgi network" evidence=IDA] InterPro:IPR004159
            Pfam:PF03141 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
            GO:GO:0005794 GO:GO:0005768 GO:GO:0005802 GO:GO:0008168
            EMBL:AY093204 EMBL:BT008461 IPI:IPI00535696 RefSeq:NP_001117383.1
            RefSeq:NP_174272.2 UniGene:At.22452 ProteinModelPortal:Q8RWB7
            SMR:Q8RWB7 PaxDb:Q8RWB7 PRIDE:Q8RWB7 EnsemblPlants:AT1G29790.1
            EnsemblPlants:AT1G29790.2 GeneID:839857 KEGG:ath:AT1G29790
            TAIR:At1g29790 eggNOG:NOG327098 HOGENOM:HOG000240829
            InParanoid:Q8RWB7 OMA:TMNFNAP PhylomeDB:Q8RWB7
            ProtClustDB:CLSN2690434 ArrayExpress:Q8RWB7 Genevestigator:Q8RWB7
            Uniprot:Q8RWB7
        Length = 378

 Score = 482 (174.7 bits), Expect = 6.2e-46, P = 6.2e-46
 Identities = 116/287 (40%), Positives = 164/287 (57%)

Query:   184 IGHACVLMKKELEEYMDYDIGSYCKDDWNLAQKLMVNGCDPLPRRRCLTRASKVYQKPFP 243
             I  AC      L EYM+Y   S C  D +L +KL++ GC PLPRRRC +R         P
Sbjct:   105 IASACHNYPDLLHEYMNYTPFSLCPSDTDLVEKLILRGCHPLPRRRCFSRT--------P 156

Query:   244 INESLWKLPDGRNVRWSNYQCRNFECLSSKNPKRGYSKCTGCFEMDKEKPKWVANRSVPV 303
              N S  K P+  NV WS Y C++F+CL +K    G+        ++K K ++ A +S  +
Sbjct:   157 RNPSDSK-PES-NVLWSYYSCKSFDCLITKFSDLGFD-----LSLEKSKSQFSAYKS-EL 208

Query:   304 DFLISDILAI-KPGET--RIGLDFGVGTGTFAARMREQNVTIVSTALNLGAPFNEMIALR 360
             D  IS +L I K   +  R+G+D G GTG+FAA M+ +NVT+++T +N  AP++E +A+R
Sbjct:   209 DLPISQLLQIAKSANSVLRLGIDVGGGTGSFAAAMKARNVTVLTTTMNFNAPYSEAVAMR 268

Query:   361 GLIPLYVTLNQRLPFFDNTMDLIHTTGFMDGXXXXXXXXXXXXXXXXXXRPGGLLWIDRF 420
             GL+PL+V L QRLP FD  +DL+     ++                   R GG LW+DRF
Sbjct:   269 GLVPLHVPLQQRLPVFDGVVDLVRCGRAVNRWIPVTVMEFFFFDLDRILRGGGYLWLDRF 328

Query:   421 FCNKKDLDD-YMYMFLQFRYKKHKWAISPK--SKD-EVYLSALLEKP 463
             F  K DL++ Y  M  +  YKK KWA++ K  SK  EV+L+ALL+KP
Sbjct:   329 FSKKVDLENVYAPMIGKLGYKKVKWAVANKADSKHGEVFLTALLQKP 375


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.324   0.140   0.434    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      467       434   0.00087  118 3  11 22  0.49    33
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  623 (66 KB)
  Total size of DFA:  300 KB (2155 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  45.09u 0.14s 45.23t   Elapsed:  00:00:03
  Total cpu time:  45.10u 0.14s 45.24t   Elapsed:  00:00:03
  Start:  Mon May 20 18:56:30 2013   End:  Mon May 20 18:56:33 2013

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