BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012235
(467 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q94II3|PMTL_ARATH Probable methyltransferase PMT21 OS=Arabidopsis thaliana GN=ERD3
PE=2 SV=1
Length = 600
Score = 52.4 bits (124), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 53/120 (44%), Gaps = 5/120 (4%)
Query: 300 SVPVDFLISDILAIKPGETRIGLDFGVGTGTFAARMREQNVTIVSTALNLGAPFNEMIAL 359
S VD + I +K G R +D G G ++ + ++ + VS A AL
Sbjct: 175 SAYVDLMQDLIPEMKDGTIRTAIDTGCGVASWGGDLLDRGILTVSLAPRDNHEAQVQFAL 234
Query: 360 RGLIP--LYVTLNQRLPFFDNTMDLIHTTGFMDGWLDMLLLDFILFDWDRILRPGGLLWI 417
IP L + QRLPF N+ D+ H + + W + L + RILRPGG W+
Sbjct: 235 ERGIPAILGIISTQRLPFPSNSFDMAHCSRCLIPWTE--FGGVYLLEVHRILRPGG-FWV 291
Score = 42.0 bits (97), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 43/102 (42%)
Query: 312 AIKPGETRIGLDFGVGTGTFAARMREQNVTIVSTALNLGAPFNEMIALRGLIPLYVTLNQ 371
AI + R +D G AA + + +++ + A ++ RGLI Y +
Sbjct: 442 AIGSDKIRNVMDMNTAYGGLAAALVNDPLWVMNVVSSYAANTLPVVFDRGLIGTYHDWCE 501
Query: 372 RLPFFDNTMDLIHTTGFMDGWLDMLLLDFILFDWDRILRPGG 413
+ T DL+H G + +++ + DRILRP G
Sbjct: 502 AFSTYPRTYDLLHVDGLFTSESQRCDMKYVMLEMDRILRPSG 543
>sp|Q9SD39|PMTR_ARATH Probable methyltransferase PMT27 OS=Arabidopsis thaliana
GN=At3g51070 PE=3 SV=1
Length = 895
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 77/170 (45%), Gaps = 14/170 (8%)
Query: 303 VDFLISDILAIKPGE-TRIGLDFGVGTGTFAARMREQNVTIVSTALNLGAPFNEMIALRG 361
+DFL + I G+ TR+ LD G G +F + E++V +S A AL
Sbjct: 480 IDFLQQSLKNIAWGKRTRVILDVGCGVASFGGFLFERDVIAMSLAPKDEHEAQVQFALER 539
Query: 362 LIPL--YVTLNQRLPFFDNTMDLIHTTGFMDGWLD---MLLLDFILFDWDRILRPGG-LL 415
IP V ++RLPF DLIH W + MLLL+ +R+LRPGG +
Sbjct: 540 KIPAISAVMGSKRLPFPSRVFDLIHCARCRVPWHNEGGMLLLEL-----NRMLRPGGYFV 594
Query: 416 WIDRFFCNKKDLDDYMYMFLQFRYKKHKWAISPKSKDEV--YLSALLEKP 463
W K + D ++ + K W + +KD++ +A+ +KP
Sbjct: 595 WSATPVYQKLEEDVQIWKEMSALTKSLCWELVTINKDKLNGIGAAIYQKP 644
Score = 36.2 bits (82), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 2/95 (2%)
Query: 322 LDFGVGTGTFAARMREQNVTIVSTALNLGAPFN-EMIALRGLIPLYVTLNQRLPFFDNTM 380
+D G FAA +++ V +++ +N+ +P +I RGL +Y + + +
Sbjct: 754 MDMRAVYGGFAAALKDLQVWVMN-VVNINSPDTLPIIYERGLFGIYHDWCESFSTYPRSY 812
Query: 381 DLIHTTGFMDGWLDMLLLDFILFDWDRILRPGGLL 415
DL+H L ++ + DRI+RPGG L
Sbjct: 813 DLLHADHLFSKLRTRCNLVPVMAEVDRIVRPGGKL 847
>sp|Q0WT31|PMTP_ARATH Probable methyltransferase PMT25 OS=Arabidopsis thaliana
GN=At2g34300 PE=1 SV=2
Length = 770
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 73/167 (43%), Gaps = 8/167 (4%)
Query: 303 VDFLISDILAIKPGE-TRIGLDFGVGTGTFAARMREQNVTIVSTALNLGAPFNEMIALRG 361
+DF+ AI G TR+ LD G G +F + E++V +S A AL
Sbjct: 349 IDFIQQSHPAIAWGNRTRVILDVGCGVASFGGYLFERDVLALSFAPKDEHEAQVQFALER 408
Query: 362 LIP--LYVTLNQRLPFFDNTMDLIHTTGFMDGWLDMLLLDFILFDWDRILRPGG-LLWID 418
IP L V +RLPF + DLIH W + +L + +R LRPGG +W
Sbjct: 409 GIPAMLNVMGTKRLPFPGSVFDLIHCARCRVPW--HIEGGKLLLELNRALRPGGFFVWSA 466
Query: 419 RFFCNKKDLDDYMYMFLQFRYKKHKWAISPKSKDEV--YLSALLEKP 463
K + D ++ + K W + KD++ +A+ +KP
Sbjct: 467 TPVYRKNEEDSGIWKAMSELTKAMCWKLVTIKKDKLNEVGAAIYQKP 513
>sp|Q9C6S7|PMTK_ARATH Probable methyltransferase PMT20 OS=Arabidopsis thaliana
GN=At1g31850 PE=1 SV=1
Length = 603
Score = 49.3 bits (116), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 81/192 (42%), Gaps = 18/192 (9%)
Query: 237 VYQKPFPINESLWKLPDGRN--VRW--SNYQC--RN--FECLSSKNPKRGYSKCTG-CFE 287
VY+K NE L PDG +RW S QC RN ++ ++ + + + K G F
Sbjct: 113 VYEK----NECLIPPPDGYKPPIRWPKSREQCWYRNVPYDWINKQKSNQHWLKKEGDKFH 168
Query: 288 MDKEKPKWVANRSVPVDFLISDILAIKPGETRIGLDFGVGTGTFAARMREQNVTIVSTAL 347
+ S VD + I +K G R +D G G ++ + ++ + +S A
Sbjct: 169 FPGGGTMFPRGVSHYVDLMQDLIPEMKDGTVRTAIDTGCGVASWGGDLLDRGILSLSLAP 228
Query: 348 NLGAPFNEMIALRGLIP--LYVTLNQRLPFFDNTMDLIHTTGFMDGWLDMLLLDFILFDW 405
AL IP L + QRLPF N D+ H + + W + L +
Sbjct: 229 RDNHEAQVQFALERGIPAILGIISTQRLPFPSNAFDMAHCSRCLIPWTE--FGGIYLLEI 286
Query: 406 DRILRPGGLLWI 417
RI+RPGG W+
Sbjct: 287 HRIVRPGG-FWV 297
Score = 39.7 bits (91), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 46/106 (43%)
Query: 312 AIKPGETRIGLDFGVGTGTFAARMREQNVTIVSTALNLGAPFNEMIALRGLIPLYVTLNQ 371
A+ + R +D G F+A + E + +++ + A ++ RGLI Y +
Sbjct: 448 ALGTDKIRNVMDMNTVYGGFSAALIEDPIWVMNVVSSYSANSLPVVFDRGLIGTYHDWCE 507
Query: 372 RLPFFDNTMDLIHTTGFMDGWLDMLLLDFILFDWDRILRPGGLLWI 417
+ T DL+H + +IL + DRILRP G + I
Sbjct: 508 AFSTYPRTYDLLHLDSLFTLESHRCEMKYILLEMDRILRPSGYVII 553
>sp|Q8L7V3|PMTQ_ARATH Probable methyltransferase PMT26 OS=Arabidopsis thaliana
GN=At5g64030 PE=1 SV=1
Length = 829
Score = 48.9 bits (115), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 68/156 (43%), Gaps = 6/156 (3%)
Query: 303 VDFLISDILAIKPGE-TRIGLDFGVGTGTFAARMREQNVTIVSTALNLGAPFNEMIALRG 361
+DF+ + AI G+ +R+ LD G G +F + +++V +S A AL
Sbjct: 407 IDFIQESVPAIAWGKRSRVVLDVGCGVASFGGFLFDRDVITMSLAPKDEHEAQVQFALER 466
Query: 362 LIPL--YVTLNQRLPFFDNTMDLIHTTGFMDGWLDMLLLDFILFDWDRILRPGG-LLWID 418
IP V RLPF D++H W + +L + +R+LRPGG +W
Sbjct: 467 GIPAISAVMGTTRLPFPGRVFDIVHCARCRVPW--HIEGGKLLLELNRVLRPGGFFVWSA 524
Query: 419 RFFCNKKDLDDYMYMFLQFRYKKHKWAISPKSKDEV 454
KK D ++ + KK W + +KD +
Sbjct: 525 TPVYQKKTEDVEIWKAMSELIKKMCWELVSINKDTI 560
Score = 33.5 bits (75), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 42/105 (40%)
Query: 311 LAIKPGETRIGLDFGVGTGTFAARMREQNVTIVSTALNLGAPFNEMIALRGLIPLYVTLN 370
L I R +D G FAA +R+ V +++ +I RGL +Y
Sbjct: 670 LGINWASVRNVMDMRAVYGGFAAALRDLKVWVMNVVPIDSPDTLAIIYERGLFGIYHDWC 729
Query: 371 QRLPFFDNTMDLIHTTGFMDGWLDMLLLDFILFDWDRILRPGGLL 415
+ + + DL+H L ++ + DR+LRP G L
Sbjct: 730 ESFSTYPRSYDLLHADHLFSKLKQRCNLTAVIAEVDRVLRPEGKL 774
>sp|Q9ZW75|PMTJ_ARATH Probable methyltransferase PMT19 OS=Arabidopsis thaliana
GN=At2g43200 PE=3 SV=1
Length = 611
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Query: 316 GETRIGLDFGVGTGTFAARMREQNVTIVSTA-LNLGAPFNEMIALRGLIPLYVTLNQRLP 374
G+ R +D G G FAA + + + +++ +L ++ RGLI Y+ + L
Sbjct: 465 GKYRNVIDMNAGLGGFAAALIKYPMWVMNVVPFDLKPNTLGVVYDRGLIGTYMNWCEALS 524
Query: 375 FFDNTMDLIHTTGFMDGWLDMLLLDFILFDWDRILRPGGLLWI-DRF 420
+ T DLIH G +LD + IL + RILRP G + I DRF
Sbjct: 525 TYPRTYDLIHANGVFSLYLDKCDIVDILLEMQRILRPEGAVIIRDRF 571
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 77/192 (40%), Gaps = 16/192 (8%)
Query: 229 RCLTRASKVYQKPFPINESLWKLPDGRNVRWSNYQCRNFECLSSKNPKRGYSKCTG-CFE 287
RCL Y+ PFP W P+ R W ++ F+ L+ + + + G F
Sbjct: 134 RCLVPKPTGYKTPFP-----W--PESRKYAW--FRNVPFKRLAELKKTQNWVRLEGDRFV 184
Query: 288 MDKEKPKWVANRSVPVDFLISDILAIKPGETRIGLDFGVGTGTFAARMREQNVTIVSTAL 347
+ VD ++S +L + G R LD G G +F A + + +S A
Sbjct: 185 FPGGGTSFPGGVKDYVDVILS-VLPLASGSIRTVLDIGCGVASFGAFLLNYKILTMSIAP 243
Query: 348 NLGAPFNEMIALRGLIP--LYVTLNQRLPFFDNTMDLIHTTGFMDGWLDMLLLDFILFDW 405
AL +P L V +LP+ + D++H + + W L L +
Sbjct: 244 RDIHEAQVQFALERGLPAMLGVLSTYKLPYPSRSFDMVHCSRCLVNWTSYDGL--YLMEV 301
Query: 406 DRILRPGGLLWI 417
DR+LRP G W+
Sbjct: 302 DRVLRPEG-YWV 312
>sp|Q94EJ6|PMTE_ARATH Probable methyltransferase PMT14 OS=Arabidopsis thaliana
GN=At4g18030 PE=1 SV=1
Length = 621
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 80/192 (41%), Gaps = 16/192 (8%)
Query: 229 RCLTRASKVYQKPFPINESLWKLPDGRNVRWSNYQCRNFECLSSKNPKRGYSKCTG-CFE 287
RCL A K Y PFP W P R+ + +Y F+ L+ + + + + G F+
Sbjct: 127 RCLVPAPKGYMTPFP-----W--PKSRD--YVHYANAPFKSLTVEKAGQNWVQFQGNVFK 177
Query: 288 MDKEKPKWVANRSVPVDFLISDILAIKPGETRIGLDFGVGTGTFAARMREQNVTIVSTAL 347
+ ++ L S ++ IK G R LD G G ++ A M ++NV +S A
Sbjct: 178 FPGGGTMFPQGADAYIEELAS-VIPIKDGSVRTALDTGCGVASWGAYMLKRNVLTMSFAP 236
Query: 348 NLGAPFNEMIALRGLIPLYVTL--NQRLPFFDNTMDLIHTTGFMDGWLDMLLLDFILFDW 405
AL +P + + + LP+ D+ + + W L +
Sbjct: 237 RDNHEAQVQFALERGVPAIIAVLGSILLPYPARAFDMAQCSRCLIPW--TANEGTYLMEV 294
Query: 406 DRILRPGGLLWI 417
DR+LRPGG W+
Sbjct: 295 DRVLRPGG-YWV 305
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 43/94 (45%)
Query: 322 LDFGVGTGTFAARMREQNVTIVSTALNLGAPFNEMIALRGLIPLYVTLNQRLPFFDNTMD 381
+D G G FAA + +++ + ++ RGLI +Y + + T D
Sbjct: 464 MDMNAGLGGFAAALESPKSWVMNVIPTINKNTLSVVYERGLIGIYHDWCEGFSTYPRTYD 523
Query: 382 LIHTTGFMDGWLDMLLLDFILFDWDRILRPGGLL 415
IH +G + L+ IL + DRILRP G++
Sbjct: 524 FIHASGVFSLYQHSCKLEDILLETDRILRPEGIV 557
>sp|Q9SZX8|PMTH_ARATH Probable methyltransferase PMT17 OS=Arabidopsis thaliana
GN=At4g10440 PE=3 SV=1
Length = 633
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 54/120 (45%), Gaps = 8/120 (6%)
Query: 303 VDFLISDILAIKP---GETRIGLDFGVGTGTFAARMREQNVTIVSTALNLGAPFNEMIAL 359
D I DI + P G R +D G G +F A + ++++ VS A AL
Sbjct: 197 ADAYIDDIARLIPLTDGGIRTAIDTGCGVASFGAYLLKRDIMAVSFAPRDTHEAQVQFAL 256
Query: 360 RGLIPLYVTL--NQRLPFFDNTMDLIHTTGFMDGWLDMLLLDFILFDWDRILRPGGLLWI 417
+P + + ++RLP+ DL H + + W L L + DR+LRPGG WI
Sbjct: 257 ERGVPAIIGIMGSRRLPYPARAFDLAHCSRCLIPWFKNDGL--YLMEVDRVLRPGG-YWI 313
Score = 38.5 bits (88), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 43/106 (40%), Gaps = 11/106 (10%)
Query: 316 GETRIGLDFGVGTGTFAARMRE------QNVTIVSTALNLGAPFNEMIALRGLIPLYVTL 369
G R +D G FAA M + V + + LG +I RGLI Y
Sbjct: 470 GRFRNIMDMNAFLGGFAASMLKYPSWVMNVVPVDAEKQTLG-----VIYERGLIGTYQDW 524
Query: 370 NQRLPFFDNTMDLIHTTGFMDGWLDMLLLDFILFDWDRILRPGGLL 415
+ + T D+IH G + L IL + DRILRP G +
Sbjct: 525 CEGFSTYPRTYDMIHAGGLFSLYEHRCDLTLILLEMDRILRPEGTV 570
>sp|Q9C884|PMTI_ARATH Probable methyltransferase PMT18 OS=Arabidopsis thaliana
GN=At1g33170 PE=2 SV=1
Length = 639
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 55/122 (45%), Gaps = 12/122 (9%)
Query: 303 VDFLISDILAIKP---GETRIGLDFGVGTGTFAARMREQNVTIVSTALNLGAPFNEMIAL 359
D I DI + P G R +D G G +F A + ++++ +S A AL
Sbjct: 214 ADAYIDDIARLIPLTDGAIRTAIDTGCGVASFGAYLLKRDIVAMSFAPRDTHEAQVQFAL 273
Query: 360 RGLIPLYVTL--NQRLPFFDNTMDLIHTTGFMDGWL--DMLLLDFILFDWDRILRPGGLL 415
+P + + ++RLP+ DL H + + W D L L + DR+LRPGG
Sbjct: 274 ERGVPAIIGIMGSRRLPYPARAFDLAHCSRCLIPWFQNDGLYLTEV----DRVLRPGG-Y 328
Query: 416 WI 417
WI
Sbjct: 329 WI 330
Score = 38.1 bits (87), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 42/106 (39%), Gaps = 11/106 (10%)
Query: 316 GETRIGLDFGVGTGTFAARMRE------QNVTIVSTALNLGAPFNEMIALRGLIPLYVTL 369
G R +D G FAA M + V + + LG F RG I Y
Sbjct: 488 GRFRNIMDMNAYLGGFAAAMMKYPSWVMNVVPVDAEKQTLGVIFE-----RGFIGTYQDW 542
Query: 370 NQRLPFFDNTMDLIHTTGFMDGWLDMLLLDFILFDWDRILRPGGLL 415
+ + T DLIH G + + + IL + DRILRP G +
Sbjct: 543 CEGFSTYPRTYDLIHAGGLFSIYENRCDVTLILLEMDRILRPEGTV 588
>sp|Q9LYN3|PMTM_ARATH Probable methyltransferase PMT22 OS=Arabidopsis thaliana
GN=At3g56080 PE=3 SV=1
Length = 610
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 45/101 (44%), Gaps = 4/101 (3%)
Query: 317 ETRIGLDFGVGTGTFAARMREQNVTIVSTALNLGAPFNEMIALRGLIP--LYVTLNQRLP 374
+ R+ LD G G +F + ++NV +S A AL IP L V Q+LP
Sbjct: 228 KVRVVLDVGCGVASFGGTLLDKNVITMSFAPKDEHEAQIQFALERGIPATLAVIGTQKLP 287
Query: 375 FFDNTMDLIHTTGFMDGWLDMLLLDFILFDWDRILRPGGLL 415
F DN D+IH W L + +R+LRPGG
Sbjct: 288 FPDNAYDVIHCARCRVHWHGY--GGRPLLELNRVLRPGGFF 326
Score = 39.3 bits (90), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 318 TRIG--LDFGVGTGTFAARMREQNVTIVSTALNLGAPFNEMIALRGLIPLYVTLNQRLPF 375
TRI +D G G FAA + + + +++ G I RGLI +Y +
Sbjct: 471 TRIHNVMDMNAGYGGFAAALINKPLWVMNVIPVEGEDTLSTIFDRGLIGIYHDWCESFNT 530
Query: 376 FDNTMDLIHTTGFMDGWLDMLLLDFILFDWDRILRPGGLL 415
+ + DL+H++ L ++ + DRILRPGG L
Sbjct: 531 YPRSYDLLHSSFLFTNLSQRCDLMEVVVEIDRILRPGGYL 570
>sp|Q93W95|PMTD_ARATH Probable methyltransferase PMT13 OS=Arabidopsis thaliana
GN=At4g00740 PE=1 SV=1
Length = 600
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 4/114 (3%)
Query: 307 ISDILAIKPGETRIGLDFGVGTGTFAARMREQNVTIVSTALNLGAPFNEMIALRGLIPLY 366
++ + + G R LD G G +F + Q + +S A AL +P +
Sbjct: 192 LAQYIPLNGGTLRTALDMGCGVASFGGTLLSQGILALSFAPRDSHKSQIQFALERGVPAF 251
Query: 367 VTL--NQRLPFFDNTMDLIHTTGFMDGWLDMLLLDFILFDWDRILRPGGLLWID 418
V + +RLPF + DL+H + + + FI + DR+LRPGG L I
Sbjct: 252 VAMLGTRRLPFPAYSFDLMHCSRCLIPFTAYNATYFI--EVDRLLRPGGYLVIS 303
Score = 32.3 bits (72), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 44/109 (40%), Gaps = 6/109 (5%)
Query: 311 LAIKPGETRIGLDFGVGTGTFAARMREQNVTIVSTALNLGAPFNEMIALRGLIPLYVTLN 370
L +K R +D G FAA + V +++ ++I RGLI +Y
Sbjct: 437 LKLKSPTVRNVMDMNAFFGGFAATLASDPVWVMNVIPARKPLTLDVIYDRGLIGVYHDWC 496
Query: 371 QRLPFFDNTMDLIHTTGF------MDGWLDMLLLDFILFDWDRILRPGG 413
+ + T D IH +G D L ++ + DRILRP G
Sbjct: 497 EPFSTYPRTYDFIHVSGIESLIKRQDSSKSRCSLVDLMVEMDRILRPEG 545
>sp|Q6NPR7|PMTO_ARATH Probable methyltransferase PMT24 OS=Arabidopsis thaliana
GN=At1g29470 PE=1 SV=1
Length = 770
Score = 46.2 bits (108), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 71/167 (42%), Gaps = 8/167 (4%)
Query: 303 VDFLISDILAIKPGE-TRIGLDFGVGTGTFAARMREQNVTIVSTALNLGAPFNEMIALRG 361
+DFL I G TR+ LD G G +F + +++V +S A AL
Sbjct: 349 IDFLQESYPDIAWGNRTRVILDVGCGVASFGGYLFDRDVLALSFAPKDEHEAQVQFALER 408
Query: 362 LIPLY--VTLNQRLPFFDNTMDLIHTTGFMDGWLDMLLLDFILFDWDRILRPGG-LLWID 418
IP V +RLPF + DLIH W + +L + +R LRPGG +W
Sbjct: 409 GIPAMSNVMGTKRLPFPGSVFDLIHCARCRVPW--HIEGGKLLLELNRALRPGGFFVWSA 466
Query: 419 RFFCNKKDLDDYMYMFLQFRYKKHKWAISPKSKDEV--YLSALLEKP 463
K + D ++ + K W + KDE+ +A+ +KP
Sbjct: 467 TPVYRKTEEDVGIWKAMSKLTKAMCWELMTIKKDELNEVGAAIYQKP 513
>sp|Q9ZPH9|PMTF_ARATH Probable methyltransferase PMT15 OS=Arabidopsis thaliana
GN=At4g00750 PE=1 SV=1
Length = 633
Score = 45.8 bits (107), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 50/113 (44%), Gaps = 5/113 (4%)
Query: 307 ISDILAIKPGETRIGLDFGVGTGTFAARMREQNVTIVSTALNLGAPFNEMIALRGLIP-- 364
I ++ +K G R +D G G +F A + +N+ +S A AL +P
Sbjct: 207 IGRLINLKDGSIRTAIDTGCGVASFGAYLMSRNIVTMSFAPRDTHEAQVQFALERGVPAI 266
Query: 365 LYVTLNQRLPFFDNTMDLIHTTGFMDGWLDMLLLDFILFDWDRILRPGGLLWI 417
+ V + RLPF D+ H + + W L + DR+LRPGG WI
Sbjct: 267 IGVLASIRLPFPARAFDIAHCSRCLIPWGQYN--GTYLIEVDRVLRPGG-YWI 316
Score = 40.4 bits (93), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 46/104 (44%), Gaps = 11/104 (10%)
Query: 316 GETRIGLDFGVGTGTFAARMREQ-----NVTIVSTALN-LGAPFNEMIALRGLIPLYVTL 369
G R LD G FA+ + + NV V ++N LG +I RGLI Y
Sbjct: 476 GRYRNFLDMNAHLGGFASALVDDPVWVMNVVPVEASVNTLG-----VIYERGLIGTYQNW 530
Query: 370 NQRLPFFDNTMDLIHTTGFMDGWLDMLLLDFILFDWDRILRPGG 413
+ + + T D IH + D ++ IL + DRILRP G
Sbjct: 531 CEAMSTYPRTYDFIHADSVFSLYKDRCDMEDILLEMDRILRPKG 574
>sp|Q9SIZ3|PMTN_ARATH Probable methyltransferase PMT23 OS=Arabidopsis thaliana
GN=At2g40280 PE=1 SV=2
Length = 589
Score = 45.8 bits (107), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 73/173 (42%), Gaps = 16/173 (9%)
Query: 303 VDFLISDILAIKPGET-RIGLDFGVGTGTFAARMREQNVTIVSTALNLGAPFNEMIALRG 361
V+F+ + +IK G+ R+ LD G G +F + +++V +S A AL
Sbjct: 189 VEFIEKALPSIKWGKNIRVVLDVGCGVASFGGSLLDKDVITMSFAPKDEHEAQIQFALER 248
Query: 362 LIP--LYVTLNQRLPFFDNTMDLIHTTGF-----MDGWLDMLLLDFILFDWDRILRPGG- 413
IP L V Q+L F N DLIH DG +L L+ R+LRPGG
Sbjct: 249 GIPATLSVIGTQQLTFPSNAFDLIHCARCRVHWDADGGKPLLELN-------RVLRPGGF 301
Query: 414 LLWIDRFFCNKKDLDDYMYMFLQFRYKKHKWAISPKSKDEVYLSALLEKPPRA 466
+W D D ++ + K W + K+ D + ++ + P +
Sbjct: 302 FIWSATPVYRDNDRDSRIWNEMVSLTKSICWKVVTKTVDSSGIGLVIYQKPTS 354
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 74/182 (40%), Gaps = 28/182 (15%)
Query: 243 PINESLWKLPDGRNVRWSNYQCRNFECLSSKNPKRGYSKCTGCFEMDKEKPKWVANRSVP 302
P+ + L KLP G W + L S P+ S + K+ KW A+
Sbjct: 381 PLAKCLSKLPSGNVQSWPELWPKR---LVSVKPQ---SISVKAETLKKDTEKWSAS---- 430
Query: 303 VDFLISDI----LAIKPGETRIGLDFGVGTGTFAARMRE-----QNVTIVSTALNLGAPF 353
+SD+ LA+ R +D G G FAA + NV V L +
Sbjct: 431 ----VSDVYLKHLAVNWSTVRNVMDMNAGFGGFAAALINLPLWVMNVVPVDKPDTLSVVY 486
Query: 354 NEMIALRGLIPLYVTLNQRLPFFDNTMDLIHTTGFMDGWLDMLLLDFILFDWDRILRPGG 413
+ RGLI +Y + + + T DL+H++ + + ++ + DRI+RPGG
Sbjct: 487 D-----RGLIGVYHDWCESVNTYPRTYDLLHSSFLLGDLTQRCEIVQVVAEIDRIVRPGG 541
Query: 414 LL 415
L
Sbjct: 542 YL 543
>sp|O80844|PMTG_ARATH Probable methyltransferase PMT16 OS=Arabidopsis thaliana
GN=At2g45750 PE=3 SV=1
Length = 631
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 51/120 (42%), Gaps = 8/120 (6%)
Query: 303 VDFLISDI---LAIKPGETRIGLDFGVGTGTFAARMREQNVTIVSTALNLGAPFNEMIAL 359
D I DI + + G R +D G G +F A + +N+T +S A AL
Sbjct: 191 ADAYIDDIGRLIDLSDGSIRTAIDTGCGVASFGAYLLSRNITTMSFAPRDTHEAQVQFAL 250
Query: 360 RGLIPLYVTL--NQRLPFFDNTMDLIHTTGFMDGWLDMLLLDFILFDWDRILRPGGLLWI 417
+P + + RLP+ DL H + + W L + DR+LRPGG WI
Sbjct: 251 ERGVPAMIGIMATIRLPYPSRAFDLAHCSRCLIPWGQN--DGAYLMEVDRVLRPGG-YWI 307
Score = 40.4 bits (93), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 44/104 (42%), Gaps = 11/104 (10%)
Query: 316 GETRIGLDFGVGTGTFAARMREQ-----NVTIVSTALN-LGAPFNEMIALRGLIPLYVTL 369
G R +D G FAA + + NV V LN LG +I RGLI Y
Sbjct: 469 GRYRNLVDMNAYLGGFAAALADDPVWVMNVVPVEAKLNTLG-----VIYERGLIGTYQNW 523
Query: 370 NQRLPFFDNTMDLIHTTGFMDGWLDMLLLDFILFDWDRILRPGG 413
+ + + T D IH + + IL + DRILRPGG
Sbjct: 524 CEAMSTYPRTYDFIHADSVFTLYQGQCEPEEILLEMDRILRPGG 567
>sp|B9DFI7|PMT2_ARATH Probable methyltransferase PMT2 OS=Arabidopsis thaliana
GN=At1g26850 PE=1 SV=2
Length = 616
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 3/104 (2%)
Query: 316 GETRIGLDFGVGTGTFAARMREQNVTIVSTALNLGAPFNEM--IALRGLIPLYVTLNQRL 373
G R +D G G FAA + Q + +++ + A N + + RGLI +Y +
Sbjct: 462 GRYRNIMDMNAGFGGFAAALESQKLWVMNVVPTI-AEKNRLGVVYERGLIGIYHDWCEAF 520
Query: 374 PFFDNTMDLIHTTGFMDGWLDMLLLDFILFDWDRILRPGGLLWI 417
+ T DLIH + + D IL + DRILRP G + I
Sbjct: 521 STYPRTYDLIHANHLFSLYKNKCNADDILLEMDRILRPEGAVII 564
Score = 42.4 bits (98), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 52/116 (44%), Gaps = 11/116 (9%)
Query: 307 ISDILAIKPGETRIGLDFGVGTGTFAARMREQNVTIVSTALNLGAPFNEMIALRGLIPLY 366
++ ++ ++ G R LD G G ++ A + +NV +S A AL +P
Sbjct: 197 LASVIPMENGTVRTALDTGCGVASWGAYLWSRNVRAMSFAPRDSHEAQVQFALERGVPAV 256
Query: 367 VTL--NQRLPFFDNTMDLIHTTGFMDGWL---DMLLLDFILFDWDRILRPGGLLWI 417
+ + +LP+ D+ H + + W M L++ DR+LRPGG WI
Sbjct: 257 IGVLGTIKLPYPTRAFDMAHCSRCLIPWGANDGMYLMEV-----DRVLRPGG-YWI 306
>sp|Q8H118|PMT1_ARATH Probable methyltransferase PMT1 OS=Arabidopsis thaliana
GN=At3g23300 PE=1 SV=2
Length = 611
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 44/100 (44%), Gaps = 4/100 (4%)
Query: 316 GETRIGLDFGVGTGTFAARMREQNVTIVSTALNLGAPFNEMIALRGLIPLYVTL--NQRL 373
G R LD G G +F + + +S A N AL IP Y+ + +RL
Sbjct: 209 GRLRTFLDVGCGVASFGGYLLASEIMTMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRL 268
Query: 374 PFFDNTMDLIHTTGFMDGWLDMLLLDFILFDWDRILRPGG 413
P+ + +L H + WL +L + DR+LRPGG
Sbjct: 269 PYPSRSFELAHCSRCRIDWLQRD--GILLLELDRVLRPGG 306
Score = 39.3 bits (90), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 61/141 (43%), Gaps = 8/141 (5%)
Query: 278 GYSKCTGCFEMDKEKPKWVANRSVPVDFLISDILAIKPGETRIGLDFGVGTGTFAARMRE 337
GYS T FE D E W D L I+ R +D G+FAA ++E
Sbjct: 422 GYS--TDIFEKDTET--WRQRVDTYWDLLSP---KIQSDTVRNIMDMKASMGSFAAALKE 474
Query: 338 QNVTIVSTALNLGAPFNEMIALRGLIPLYVTLNQRLPFFDNTMDLIHTTGFM-DGWLDML 396
++V +++ G ++I RGL+ + + + T DL+H + D
Sbjct: 475 KDVWVMNVVPEDGPNTLKLIYDRGLMGAVHSWCEAFSTYPRTYDLLHAWDIISDIKKRGC 534
Query: 397 LLDFILFDWDRILRPGGLLWI 417
+ +L + DRILRP G + I
Sbjct: 535 SAEDLLLEMDRILRPSGFILI 555
>sp|Q8VZV7|PMT9_ARATH Probable methyltransferase PMT9 OS=Arabidopsis thaliana
GN=At5g14430 PE=1 SV=1
Length = 612
Score = 41.6 bits (96), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 66/152 (43%), Gaps = 9/152 (5%)
Query: 313 IKPGETRIGLDFGVGTGTFAARMREQNVTIVSTALNLGAPFNEMIALRGLIPLYVTLNQR 372
++ R +D G FAA + +++V +++ +P ++I RGLI +
Sbjct: 451 VQKNSIRNVMDMSSNLGGFAAALNDKDVWVMNVMPVQSSPRMKIIYDRGLIGATHDWCEA 510
Query: 373 LPFFDNTMDLIHT-TGFMDGWLDMLLLDFILFDWDRILRPGGLLWIDRFFCNKKDLDDYM 431
+ T DLIH F + + +L + DRILRP G + I N + Y+
Sbjct: 511 FDTYPRTFDLIHAWNTFTETQARGCSFEDLLIEMDRILRPEGFVIIRDTTDNISYIKKYL 570
Query: 432 YMFLQFRYKKHKWAISPK-----SKDEVYLSA 458
+ ++ K +PK +KDE+ L A
Sbjct: 571 TL---LKWDKWSTETTPKGDPLSTKDEIVLIA 599
>sp|P65349|Y3374_MYCBO Uncharacterized methyltransferase Mb3374 OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=Mb3374 PE=3 SV=1
Length = 243
Score = 41.6 bits (96), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 51/112 (45%), Gaps = 16/112 (14%)
Query: 315 PGETRIGLDFGVGTGTFAARMREQNVTIVSTALNLGAPFNEMI-ALRGLIPLYVTL---N 370
P R LD G GTG R+ E+ + +V+ P EM+ LR +P V L
Sbjct: 36 PAAARRVLDLGAGTGKLTTRLVERGLDVVAV-----DPIPEMLDVLRAALPQTVALLGTA 90
Query: 371 QRLPFFDNTMDLIHTTGFMDGWLDMLLLDFILFDWDRILRPG---GLLWIDR 419
+ +P DN++D + W+D + + R+LRPG GL+W R
Sbjct: 91 EEIPLDDNSVDAVLVAQAWH-WVDPA---RAIPEVARVLRPGGRLGLVWNTR 138
>sp|P65348|Y3342_MYCTU Uncharacterized methyltransferase Rv3342/MT3445 OS=Mycobacterium
tuberculosis GN=Rv3342 PE=3 SV=1
Length = 243
Score = 41.6 bits (96), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 51/112 (45%), Gaps = 16/112 (14%)
Query: 315 PGETRIGLDFGVGTGTFAARMREQNVTIVSTALNLGAPFNEMI-ALRGLIPLYVTL---N 370
P R LD G GTG R+ E+ + +V+ P EM+ LR +P V L
Sbjct: 36 PAAARRVLDLGAGTGKLTTRLVERGLDVVAV-----DPIPEMLDVLRAALPQTVALLGTA 90
Query: 371 QRLPFFDNTMDLIHTTGFMDGWLDMLLLDFILFDWDRILRPG---GLLWIDR 419
+ +P DN++D + W+D + + R+LRPG GL+W R
Sbjct: 91 EEIPLDDNSVDAVLVAQAWH-WVDPA---RAIPEVARVLRPGGRLGLVWNTR 138
>sp|Q93YV7|PMT3_ARATH Probable methyltransferase PMT3 OS=Arabidopsis thaliana
GN=At4g14360 PE=1 SV=1
Length = 608
Score = 41.2 bits (95), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 43/100 (43%), Gaps = 4/100 (4%)
Query: 316 GETRIGLDFGVGTGTFAARMREQNVTIVSTALNLGAPFNEMIALRGLIP--LYVTLNQRL 373
G R D G G +F + ++ +S A N AL IP L V +RL
Sbjct: 206 GRLRTVFDVGCGVASFGGYLLSSDILTMSLAPNDVHQNQIQFALERGIPASLGVLGTKRL 265
Query: 374 PFFDNTMDLIHTTGFMDGWLDMLLLDFILFDWDRILRPGG 413
P+ + +L H + WL +L + DR+LRPGG
Sbjct: 266 PYPSRSFELSHCSRCRIDWLQRD--GILLLELDRVLRPGG 303
Score = 40.4 bits (93), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 61/141 (43%), Gaps = 8/141 (5%)
Query: 278 GYSKCTGCFEMDKEKPKWVANRSVPVDFLISDILAIKPGETRIGLDFGVGTGTFAARMRE 337
GYS TG FE D E W D L I+ R +D G+FAA ++E
Sbjct: 419 GYS--TGMFEKDTEL--WRQRVDTYWDLLSP---RIESDTVRNIMDMKASMGSFAAALKE 471
Query: 338 QNVTIVSTALNLGAPFNEMIALRGLIPLYVTLNQRLPFFDNTMDLIHTTGFMDGWLDMLL 397
++V +++ G ++I RGL+ + + + T DL+H +
Sbjct: 472 KDVWVMNVVPEDGPNTLKLIYDRGLMGAVHSWCEAFSTYPRTYDLLHAWDIISDIKKKGC 531
Query: 398 LDF-ILFDWDRILRPGGLLWI 417
+ +L + DRILRP G + I
Sbjct: 532 SEVDLLLEMDRILRPSGFIII 552
>sp|Q940J9|PMT8_ARATH Probable methyltransferase PMT8 OS=Arabidopsis thaliana
GN=At1g04430 PE=1 SV=1
Length = 623
Score = 40.8 bits (94), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 44/100 (44%), Gaps = 4/100 (4%)
Query: 316 GETRIGLDFGVGTGTFAARMREQNVTIVSTALNLGAPFNEMIALRGLIPLYVTL--NQRL 373
G R LD G G +F A + ++ +S A N AL IP Y+ + +RL
Sbjct: 214 GRLRTVLDVGCGVASFGAYLLASDIMTMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRL 273
Query: 374 PFFDNTMDLIHTTGFMDGWLDMLLLDFILFDWDRILRPGG 413
P+ + + H + WL L + D R+LRPGG
Sbjct: 274 PYPSRSFEFAHCSRCRIDWLQRDGLLLLELD--RVLRPGG 311
Score = 40.0 bits (92), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 1/106 (0%)
Query: 313 IKPGETRIGLDFGVGTGTFAARMREQNVTIVSTALNLGAPFNEMIALRGLIPLYVTLNQR 372
+K R +D G+FAA +++++V +++ G ++I RGLI +
Sbjct: 455 VKSNTVRNIMDMKAHMGSFAAALKDKDVWVMNVVSPDGPNTLKLIYDRGLIGTNHNWCEA 514
Query: 373 LPFFDNTMDLIHT-TGFMDGWLDMLLLDFILFDWDRILRPGGLLWI 417
+ T DL+H + F D + +L + DRILRP G + I
Sbjct: 515 FSTYPRTYDLLHAWSIFSDIKSKGCSAEDLLIEMDRILRPTGFVII 560
>sp|Q9C9Q8|PMTT_ARATH Probable pectin methyltransferase QUA2 OS=Arabidopsis thaliana
GN=QUA2 PE=1 SV=2
Length = 684
Score = 40.4 bits (93), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 91/220 (41%), Gaps = 28/220 (12%)
Query: 222 CDPLPRRRCLTRASKVYQKPFPINESLWKLPDGRNVRW-SNYQCRNFECLSSKNPKRGYS 280
C P ++ CL Y+ P + P G+++ W SN + E +SS + +
Sbjct: 180 CGPGSKQECLELPPVKYRVPL-------RWPTGKDIIWHSNVKITAQEVVSSGS----IT 228
Query: 281 KCTGCFEMDKEKPKWVANRSVPVD---FLISDILAIK-----PGETRIGLDFGVGTGTFA 332
K E D+ + + S V+ I++++ IK R LD G G G+F
Sbjct: 229 KRMMMMEDDQISFRSASPMSDEVEDYSHQIAEMIGIKKDNFIEAGVRTILDIGCGYGSFG 288
Query: 333 ARMREQNVTIVSTALNLGAPFNEMIALRGLIPLYVT--LNQRLPFFDNTMDLIHTTGFMD 390
A + + + + A + + L +P + ++++LP+ + D++H
Sbjct: 289 AHLLSKQILTMCIANYEASGSQVQLTLERGLPAMIGSFISKQLPYPSLSFDMLHCLRCGI 348
Query: 391 GW--LDMLLLDFILFDWDRILRPGGLLWIDRFFCNKKDLD 428
W D LLL I DR+L+PGG N ++ D
Sbjct: 349 DWDQKDGLLLVEI----DRVLKPGGYFVWTSPLTNPRNKD 384
>sp|O22285|PMTB_ARATH Probable methyltransferase PMT11 OS=Arabidopsis thaliana
GN=At2g39750 PE=2 SV=1
Length = 694
Score = 40.0 bits (92), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 2/98 (2%)
Query: 322 LDFGVGTGTFAARMREQNVT--IVSTALNLGAPFNEMIALRGLIPLYVTLNQRLPFFDNT 379
LD G G FAA + + + ++S G +I RGL+ + + + T
Sbjct: 551 LDMRAGFGGFAAALNDHKLDCWVLSVVPVSGPNTLPVIYDRGLLGVMHDWCEPFDTYPRT 610
Query: 380 MDLIHTTGFMDGWLDMLLLDFILFDWDRILRPGGLLWI 417
D +H +G + IL + DRILRPGG +I
Sbjct: 611 YDFLHASGLFSIERKRCEMSTILLEMDRILRPGGRAYI 648
>sp|Q3EC77|PMT5_ARATH Probable methyltransferase PMT5 OS=Arabidopsis thaliana
GN=At2g03480 PE=2 SV=2
Length = 606
Score = 39.7 bits (91), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 85/203 (41%), Gaps = 32/203 (15%)
Query: 227 RRRCLTRASKVYQKPFPINESLWKLPDGRNVRWS-NYQCRNFECLSS-----------KN 274
+ RC+ R + Y+ P + P GR++ WS N + + LSS +N
Sbjct: 126 KERCVVRPPRDYKIPL-------RWPLGRDIIWSGNVKITKDQFLSSGTVTTRLMLLEEN 178
Query: 275 PKRGYSKCTGCFEMDKEKPKWVANRSVPVDFLISDILAIKPGETRIGLDFGVGTGTFAAR 334
+S+ F+ K+ + +A + L SD + G R LD G G G+F A
Sbjct: 179 QITFHSEDGLVFDGVKDYARQIAE----MIGLGSDTEFAQAG-VRTVLDIGCGFGSFGAH 233
Query: 335 MREQNVTIVSTALNLGAPFNEMIALRGLIPLYVT--LNQRLPFFDNTMDLIHTTGFMDGW 392
+ + + A +AL +P + +++LP+ + D++H W
Sbjct: 234 LVSLKLMPICIAEYEATGSQVQLALERGLPAMIGNFFSKQLPYPALSFDMVHCAQCGTTW 293
Query: 393 --LDMLLLDFILFDWDRILRPGG 413
D +LL + DR+L+PGG
Sbjct: 294 DIKDAMLL----LEVDRVLKPGG 312
>sp|Q94KE1|PMTA_ARATH Probable methyltransferase PMT10 OS=Arabidopsis thaliana
GN=At1g77260 PE=2 SV=1
Length = 655
Score = 39.3 bits (90), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 8/100 (8%)
Query: 318 TRIGLDFGVGTGTFAARMREQNVTIVSTALNLGAPFNEMIALRGLIPLYVTL--NQRLPF 375
TR+ LD G G +F A + ++N T +S A AL +P V + +RL +
Sbjct: 267 TRVALDIGCGVASFGAFLMQRNTTTLSVAPKDVHENQIQFALERGVPAMVAVFATRRLLY 326
Query: 376 FDNTMDLIHTTGFMDGWL--DMLLLDFILFDWDRILRPGG 413
+ ++IH + W D +L L + +R+LR GG
Sbjct: 327 PSQSFEMIHCSRCRINWTRDDGIL----LLEVNRMLRAGG 362
>sp|Q9FG39|PMTC_ARATH Probable methyltransferase PMT12 OS=Arabidopsis thaliana
GN=At5g06050 PE=2 SV=1
Length = 682
Score = 38.5 bits (88), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Query: 322 LDFGVGTGTFAARMREQNVTI-VSTALNLGAPFN-EMIALRGLIPLYVTLNQRLPFFDNT 379
LD G G FAA + E V V + + P +I RGL+ + + + T
Sbjct: 523 LDMRAGFGGFAAALAELKVDCWVLNVIPVSGPNTLPVIYDRGLLGVMHDWCEPFDTYPRT 582
Query: 380 MDLIHTTGFMDGWLDMLLLDFILFDWDRILRPGGLLWI 417
DL+H G + ++ + DRILRPGG ++I
Sbjct: 583 YDLLHAAGLFSIERKRCNMTTMMLEMDRILRPGGRVYI 620
Score = 37.4 bits (85), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 8/101 (7%)
Query: 317 ETRIGLDFGVGTGTFAARMREQNVTIVSTALNLGAPFNEMIALRGLIPLYVT--LNQRLP 374
TR+ LD G G +F A + +NV +S A AL +P V +RL
Sbjct: 274 HTRVVLDIGCGVASFGAYLMSRNVLTMSIAPKDVHENQIQFALERGVPAMVAAFTTRRLL 333
Query: 375 FFDNTMDLIHTTGFMDGWL--DMLLLDFILFDWDRILRPGG 413
+ DL+H + W D +L L + +R+LR GG
Sbjct: 334 YPSQAFDLVHCSRCRINWTRDDGIL----LLEVNRMLRAGG 370
>sp|Q8GYW9|PMT4_ARATH Probable methyltransferase PMT4 OS=Arabidopsis thaliana
GN=At1g13860 PE=2 SV=2
Length = 603
Score = 38.5 bits (88), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Query: 319 RIGLDFGVGTGTFAARMREQNVTIVSTALNLGAPFNEMIALRGLIPLYVT--LNQRLPFF 376
R LD G G G+F A + NV + A + +AL +P + +++LP+
Sbjct: 202 RTVLDIGCGFGSFGAHLVSLNVMPICIAEYETSGSQVQLALERGLPAMIGNFFSKQLPYP 261
Query: 377 DNTMDLIHTTGFMDGW--LDMLLLDFILFDWDRILRPGG 413
+ D++H W D +L L + DR+L+PGG
Sbjct: 262 ALSFDMVHCAQCGITWDIKDAML----LLEVDRVLKPGG 296
>sp|C5C0T0|UBIE_BEUC1 Demethylmenaquinone methyltransferase OS=Beutenbergia cavernae
(strain ATCC BAA-8 / DSM 12333 / NBRC 16432) GN=ubiE
PE=3 SV=1
Length = 240
Score = 38.1 bits (87), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 51/112 (45%), Gaps = 6/112 (5%)
Query: 309 DILAIKPGETRIGLDFGVGTGTFAARMREQNVTIVSTALNLGAPFNEMIALRGLIPLYVT 368
D L +PGE R+ LD GTGT +A + + V +VS + G E R +
Sbjct: 45 DALGARPGE-RV-LDLAAGTGTSSADLADDGVDVVSCDFSTGM-VAEGKRRRPDLAFVAG 101
Query: 369 LNQRLPFFDNTMDLIHTTGFMDGWLDMLLLDFILFDWDRILRPGGLLWIDRF 420
RLPF D + D + T F G ++ L + R+ RPGG L + F
Sbjct: 102 DATRLPFADGSFDAV-TISF--GLRNVSPAVAGLSEMLRVTRPGGRLVVAEF 150
>sp|A1SE26|UBIE_NOCSJ Demethylmenaquinone methyltransferase OS=Nocardioides sp. (strain
BAA-499 / JS614) GN=ubiE PE=3 SV=1
Length = 229
Score = 38.1 bits (87), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 4/111 (3%)
Query: 310 ILAIKPGETRIGLDFGVGTGTFAARMREQNVTIVSTALNLGAPFNEMIALRGLIPLYVTL 369
I A+ P LD GTGT + ++ ++V +LG AL L P
Sbjct: 44 IAAVDPQPGERVLDLAAGTGTSSQPFADRGASVVPCDFSLGMLRVGKSALPHL-PFTAGD 102
Query: 370 NQRLPFFDNTMDLIHTTGFMDGWLDMLLLDFILFDWDRILRPGGLLWIDRF 420
RLPF D T D + + + +D L L + R+ RPGG L + F
Sbjct: 103 GTRLPFADATFDAVTISFGLRNIVDPL---SGLRELHRVTRPGGRLVVCEF 150
>sp|Q9E6M5|UL51_GAHVM Tegument protein UL51 homolog OS=Gallid herpesvirus 2 (strain
Chicken/Md5/ATCC VR-987) GN=MDV065 PE=3 SV=1
Length = 249
Score = 37.7 bits (86), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 51/124 (41%), Gaps = 12/124 (9%)
Query: 241 PFPIN--------ESLWKLPDGRNVRWSNYQC-RNFECLSSKNPKRGYSKCTGCFEMDKE 291
P PI + + KL G+++ + C RN ECLS P RG E +E
Sbjct: 45 PTPITLEMALLSADGVRKLVRGQSLARTYSACLRNLECLSRHVPGRGNPGLDAVVETHRE 104
Query: 292 KPKWVANRSVPVDFLISDILAIKPGETRIGLDFGVGTGTFAARMREQNVTIVSTALNLGA 351
+ VA+ L+ ++I G T ++ + T A ++ +V AL L
Sbjct: 105 NAQRVADTCAAA--LLHMYMSIGTGRTDAFVEHAIQL-TAATETAMSDIALVERALGLTH 161
Query: 352 PFNE 355
P NE
Sbjct: 162 PHNE 165
>sp|Q84TJ0|PMT6_ARATH Probable methyltransferase PMT6 OS=Arabidopsis thaliana
GN=At3g10200 PE=2 SV=1
Length = 591
Score = 36.6 bits (83), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 53/115 (46%), Gaps = 10/115 (8%)
Query: 310 ILAIKPGETRIGLDFGVGTGTFAARMREQNVTIVSTALNLGAPFNEMIA---LRGLIPLY 366
++ + E R +D G FAA M V +++ + A N+ ++ RGL +
Sbjct: 432 LMNVNETEVRNVMDMNAFIGGFAAAMNSYPVWVMNI---VPATMNDTLSGIFERGLNGAF 488
Query: 367 VTLNQRLPFFDNTMDLIHT----TGFMDGWLDMLLLDFILFDWDRILRPGGLLWI 417
+ + T DL+H+ + + + D LL+ I+ + DRI+RP G + I
Sbjct: 489 HDWCEAFSTYPRTYDLVHSDHVFSHYNKSYGDGCLLEDIMLEMDRIVRPQGFVII 543
>sp|Q3IJV7|UBIE_PSEHT Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Pseudoalteromonas haloplanktis (strain TAC 125)
GN=ubiE PE=3 SV=1
Length = 251
Score = 36.6 bits (83), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 57/125 (45%), Gaps = 13/125 (10%)
Query: 322 LDFGVGTGTFAARMRE------QNV--TIVSTALNLGAPFNEMIALRGLIPLYVTLN-QR 372
LD GTG A+ + Q + I S+ L +G + L G I YV +N +
Sbjct: 68 LDLAGGTGDLTAKFSQLVGETGQVILGDINSSMLKVGREKLHNLGLVGNID-YVQMNAEA 126
Query: 373 LPFFDNTMDLIHTTGFMDGWLDMLLLDFILFDWDRILRPGGLLWIDRFFCNKKDLDDYMY 432
LPF DN+ DLI T F G ++ D L RIL+PGG L + F + ++ Y
Sbjct: 127 LPFPDNSFDLI-TIAF--GLRNVTDKDKALRSMYRILKPGGRLLVLEFSKPEHEILSKAY 183
Query: 433 MFLQF 437
F F
Sbjct: 184 DFYSF 188
>sp|B2FUU6|UBIE_STRMK Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Stenotrophomonas maltophilia (strain K279a) GN=ubiE
PE=3 SV=1
Length = 253
Score = 36.2 bits (82), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 66/134 (49%), Gaps = 13/134 (9%)
Query: 313 IKPGETRIGLDFGVGTGTFAARMREQ---NVTIVSTALNLG--APFNEMIALRGLIPL-- 365
+KPG+ R+ LD GTG AA ++E+ ++V +N G + + + RGL+
Sbjct: 63 VKPGD-RV-LDLAGGTGDIAALLKERVGAEGSVVLGDINAGMLSVGRDRLTNRGLVLGLD 120
Query: 366 YVTLN-QRLPFFDNTMDLIHTTGFMDGWLDMLLLDFILFDWDRILRPGGLLWIDRFFCNK 424
YV N + LPF DN+ DL+ T F G ++ D L + R+L+ GG + F
Sbjct: 121 YVQCNAEALPFLDNSFDLV-TIAF--GLRNVTDKDAGLREMYRVLKVGGQARVLEFSEVT 177
Query: 425 KDLDDYMYMFLQFR 438
D +Y F F+
Sbjct: 178 ADWFKPIYDFHSFK 191
>sp|Q088H8|UBIE_SHEFN Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Shewanella frigidimarina (strain NCIMB 400) GN=ubiE
PE=3 SV=1
Length = 251
Score = 35.0 bits (79), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 71/168 (42%), Gaps = 20/168 (11%)
Query: 309 DILAIKPGETRIGLDFGVGTGTFAARM------REQNV--TIVSTALNLGAPFNEMIALR 360
++ A +PG LD GTG A+ R Q V I + L +G + +
Sbjct: 57 EVAAARPGMKV--LDLAGGTGDLTAKFSHLVGDRGQVVLADINDSMLKVG---RTKLRDK 111
Query: 361 GLIP--LYVTLN-QRLPFFDNTMDLIHTTGFMDGWLDMLLLDFILFDWDRILRPGGLLWI 417
G++ YV N + LPF DN D+I T F G ++ D L R+L+PGG L +
Sbjct: 112 GIVNNVSYVQANAEALPFPDNHFDII-TIAF--GLRNVTDKDAALRSMQRVLKPGGKLLV 168
Query: 418 DRFFCNKKDLDDYMYMFLQFRYKKHKWAISPKSKDEV-YLSALLEKPP 464
F K +L +Y F+ A+ K D YL+ + P
Sbjct: 169 LEFSTPKHELMRKVYDMYSFKVLPKMGALITKDADSYEYLAESIRMHP 216
>sp|B3PH48|UBIE_CELJU Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Cellvibrio japonicus (strain Ueda107) GN=ubiE PE=3
SV=1
Length = 249
Score = 35.0 bits (79), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 53/125 (42%), Gaps = 11/125 (8%)
Query: 322 LDFGVGTGTFA---ARMREQNVTIVSTALN---LGAPFNEMI--ALRGLIPLYVTLNQRL 373
LD GTG + AR+ + ++ +N LG + +I + G I Q L
Sbjct: 66 LDIAGGTGDLSYQFARLVGSSGQVILADINASMLGVGRDRLIDRGIAGNIAFTQCDAQYL 125
Query: 374 PFFDNTMDLIHTTGFMDGWLDMLLLDFILFDWDRILRPGGLLWIDRFFCNKKDLDDYMYM 433
PF DNT D I T F G ++ D L R+L+PGG L + F +L Y
Sbjct: 126 PFPDNTFDCI-TIAF--GLRNVTDKDLALRAMQRVLKPGGRLLVLEFSKPHNELLSKAYD 182
Query: 434 FLQFR 438
FR
Sbjct: 183 TYSFR 187
>sp|B4SJ34|UBIE_STRM5 Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Stenotrophomonas maltophilia (strain R551-3) GN=ubiE
PE=3 SV=1
Length = 253
Score = 34.7 bits (78), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 66/134 (49%), Gaps = 13/134 (9%)
Query: 313 IKPGETRIGLDFGVGTGTFAARMREQ---NVTIVSTALNLG--APFNEMIALRGLIPL-- 365
+KPG+ R+ LD GTG AA ++E+ ++V +N G + + + RGL+
Sbjct: 63 VKPGD-RV-LDLAGGTGDIAALLKERVGVEGSVVLGDINAGMLSVGRDRLTNRGLVLGLD 120
Query: 366 YVTLN-QRLPFFDNTMDLIHTTGFMDGWLDMLLLDFILFDWDRILRPGGLLWIDRFFCNK 424
YV N + LPF DN+ DL+ T F G ++ D L + R+L+ GG + F
Sbjct: 121 YVQCNAEALPFPDNSFDLV-TIAF--GLRNVTDKDAGLREMYRVLKVGGQARVLEFSEVT 177
Query: 425 KDLDDYMYMFLQFR 438
D +Y F F+
Sbjct: 178 ADWFKPIYDFHSFK 191
>sp|B8CI06|UBIE_SHEPW Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Shewanella piezotolerans (strain WP3 / JCM 13877)
GN=ubiE PE=3 SV=1
Length = 251
Score = 34.7 bits (78), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 64/152 (42%), Gaps = 12/152 (7%)
Query: 322 LDFGVGTGTFAARM-----REQNVTIVSTALNLGAPFNEMIALRGLIPL--YVTLN-QRL 373
LD GTG A+ + VT+ ++ E + +G++ YV N + L
Sbjct: 68 LDLAGGTGDLTAKFSHIVGEKGQVTLADINDSMLKVGREKLRDKGIVGNVNYVQANAEAL 127
Query: 374 PFFDNTMDLIHTTGFMDGWLDMLLLDFILFDWDRILRPGGLLWIDRFFCNKKDLDDYMYM 433
PF DN D+I T F G ++ D + R+L+PGG L I F K D+ +Y
Sbjct: 128 PFPDNHFDII-TIAF--GLRNVTDKDAAIASMLRVLKPGGKLLILEFSKPKHDIMRKVYD 184
Query: 434 FLQFRYKKHKWAISPKSKDEV-YLSALLEKPP 464
F+ A+ + D YL+ + P
Sbjct: 185 LYSFKVMPKMGALITQDADSYEYLAESIRMHP 216
>sp|Q1LRG9|UBIE_RALME Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 /
DSM 2839) GN=ubiE PE=3 SV=1
Length = 243
Score = 34.3 bits (77), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 55/117 (47%), Gaps = 17/117 (14%)
Query: 313 IKPGETRIGLDFGVGTGTFAARMREQN--------VTIVSTALNLGAPFNEMIALRGLI- 363
++PG+ LD GTG A +Q I + L +G + + +G++
Sbjct: 56 VRPGQKV--LDIAGGTGDLAKAFAKQAGPTGEVWLTDINESMLRVG---RDRLLNKGVVT 110
Query: 364 PLYVTLNQRLPFFDNTMDLIHTTGFMDGWLDMLLLDFILFDWDRILRPGGLLWIDRF 420
P+ + +R+PF DN DL+ T F G +M D L + R+++PGG + + F
Sbjct: 111 PVALCDAERIPFPDNYFDLV-TVAF--GLRNMTHKDAALAEMRRVIKPGGKVMVLEF 164
>sp|Q609U9|BIOC_METCA Malonyl-CoA O-methyltransferase BioC OS=Methylococcus capsulatus
(strain ATCC 33009 / NCIMB 11132 / Bath) GN=bioC PE=3
SV=1
Length = 275
Score = 34.3 bits (77), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 52/121 (42%), Gaps = 12/121 (9%)
Query: 306 LISDILAIKPGETRIGLDFGVGTGTFAARMREQNVTIVSTALNLGAPFNEMIALRGLIP- 364
L++ I + P R+ LD G GTG F+ + T AL++ LR P
Sbjct: 46 LLAGIRHLGPPPARM-LDLGAGTGHFSGLLVAAFPTAECLALDIAEGMLRF--LRSHRPG 102
Query: 365 -----LYVTLNQRLPFFDNTMDLIHTTGFMDGWLDMLLLDFILFDWDRILRPGGLLWIDR 419
L V + LP D ++DLI + W + L D + + R+LRPGG L
Sbjct: 103 ADGMGLVVGDAEALPLADESVDLIFSNMAFQ-WCERL--DRAISECCRVLRPGGRLAFST 159
Query: 420 F 420
F
Sbjct: 160 F 160
>sp|Q0KEH6|UBIE_CUPNH Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Cupriavidus necator (strain ATCC 17699 / H16 / DSM
428 / Stanier 337) GN=ubiE PE=3 SV=1
Length = 243
Score = 34.3 bits (77), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 17/118 (14%)
Query: 312 AIKPGETRIGLDFGVGTGTFAARMREQN--------VTIVSTALNLGAPFNEMIALRGLI 363
++PG LD GTG A +Q I + L +G + + +G++
Sbjct: 55 GVRPGHKV--LDIAGGTGDLAKAFAKQAGPTGEVWLTDINESMLRVG---RDRLLNKGIV 109
Query: 364 -PLYVTLNQRLPFFDNTMDLIHTTGFMDGWLDMLLLDFILFDWDRILRPGGLLWIDRF 420
P+ + +R+PF DN DL+ T F G +M D L + R+++PGG + + F
Sbjct: 110 TPVCLCDAERIPFPDNHFDLV-TVAF--GLRNMTHKDAALAEMRRVVKPGGKVMVLEF 164
>sp|Q9LZA4|PMT7_ARATH Probable methyltransferase PMT7 OS=Arabidopsis thaliana
GN=At5g04060 PE=1 SV=1
Length = 600
Score = 34.3 bits (77), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 51/115 (44%), Gaps = 9/115 (7%)
Query: 309 DILAIKPGETRIGLDFGVGTGTFAARMREQNVTIVSTALNLGAPFNEMIA---LRGLIPL 365
+++ + E R +D G FAA M + +++ + A N+ ++ RGL
Sbjct: 442 ELMNVNKTEVRNVMDTNAFIGGFAAAMNSYPLWVMNV---VPATMNDTLSGIYQRGLTGA 498
Query: 366 YVTLNQRLPFFDNTMDLIHTTGFMDGWL---DMLLLDFILFDWDRILRPGGLLWI 417
Y + + T DL+H + + LL+ I+ + DRI+RP G + I
Sbjct: 499 YHDWCEPFSTYPRTYDLLHADHLFTHYKIYGEGCLLEDIMLEMDRIIRPQGFIII 553
>sp|Q3ZC33|GGLO_BOVIN L-gulonolactone oxidase OS=Bos taurus GN=GULO PE=2 SV=3
Length = 440
Score = 34.3 bits (77), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 13/91 (14%)
Query: 388 FMDGWLDMLLLDFILFDWDRILRPGGLLWIDRFFC-----NKKDLDDYMYMFLQF--RYK 440
F D + LL+F+L W PG + WI+RFF KK+ + + + R+K
Sbjct: 246 FWDYAIGFYLLEFLL--WISTFLPGLVGWINRFFFWLLFNGKKENCNLSHKIFTYECRFK 303
Query: 441 KH--KWAISPKSKDEVYLS--ALLEKPPRAI 467
+H WAI + E L A+LE P+ +
Sbjct: 304 QHVQDWAIPREKTKEALLELKAMLEANPKVV 334
>sp|Q8HXW0|GGLO_PIG L-gulonolactone oxidase OS=Sus scrofa GN=GULO PE=2 SV=3
Length = 440
Score = 34.3 bits (77), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 21/95 (22%)
Query: 388 FMDGWLDMLLLDFILFDWDRILRPGGLLWIDRFF-----------CNKKDLDDYMYMFLQ 436
F D + LL+F+L W PG + WI+RFF CN L ++ + +
Sbjct: 246 FWDYAIGFYLLEFLL--WISTFVPGLVGWINRFFFWLLFNGKKENCN---LSHKIFTY-E 299
Query: 437 FRYKKH--KWAISPKSKDEVYLS--ALLEKPPRAI 467
R+K+H WAI + E L A+LE P+ +
Sbjct: 300 CRFKQHVQDWAIPREKTKEALLELKAMLEAHPKVV 334
>sp|C4LL93|UBIE_CORK4 Demethylmenaquinone methyltransferase OS=Corynebacterium
kroppenstedtii (strain DSM 44385 / CCUG 35717) GN=ubiE
PE=3 SV=1
Length = 229
Score = 34.3 bits (77), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 46/108 (42%), Gaps = 10/108 (9%)
Query: 314 KPGETRIGLDFGVGTGTFAARMREQNVTIVSTALNLGAPFNEMIALRGL-IPLYVTLNQR 372
KPGE + D GTG A + + +V +LG + A R +PL
Sbjct: 50 KPGEKVV--DLAAGTGVSTAELSKSGALVVGCDFSLGM----LKAGRHRNVPLVAGDGLN 103
Query: 373 LPFFDNTMDLIHTTGFMDGWLDMLLLDFILFDWDRILRPGGLLWIDRF 420
LPF DNT D + + + D L + R+++PGG L + F
Sbjct: 104 LPFADNTFDAATISFGLRNFGDTAAG---LREIARVVKPGGRLTVCEF 148
>sp|Q21H69|UBIE_SACD2 Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 /
DSM 17024) GN=ubiE PE=3 SV=1
Length = 249
Score = 33.9 bits (76), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Query: 371 QRLPFFDNTMDLIHTTGFMDGWLDMLLLDFILFDWDRILRPGGLLWIDRFFCNKKDLDDY 430
Q LPF DNT D I T F G ++ D + R+L+PGG L I F + L +
Sbjct: 123 QYLPFPDNTFDCI-TIAF--GLRNVTDKDLAIASMLRVLKPGGRLLILEFTKPQNALVEK 179
Query: 431 MYMFLQFR 438
Y F F+
Sbjct: 180 AYDFYSFK 187
>sp|Q88PW5|RF1_PSEPK Peptide chain release factor 1 OS=Pseudomonas putida (strain
KT2440) GN=prfA PE=3 SV=1
Length = 360
Score = 33.9 bits (76), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 75 VLNRMESLQDKLEKTVQQLEKEKDALDKTITRLEYKNFLEVEVIRPLYSAHIALRQIRLP 134
+LN++E LQD+ E+ L + D+T R + + EVE P+Y+A+ R+++
Sbjct: 5 LLNKLEILQDRFEELTALLGDAEVISDQTRFRAYSREYAEVE---PVYAAYKEWRKVQ-D 60
Query: 135 KAEGIGNFTMEEEPLINTFVTEEIRK 160
EG + +P + EE+R+
Sbjct: 61 DLEGAQALLKDSDPDLREMAVEEVRE 86
>sp|A7HK24|PNP_FERNB Polyribonucleotide nucleotidyltransferase OS=Fervidobacterium
nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=pnp
PE=3 SV=1
Length = 693
Score = 33.9 bits (76), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 15/87 (17%)
Query: 89 TVQQLEKEK---------DALDKTITRLEYKNFLEVEVIRPLYSAHIALRQIRLPKAEGI 139
T +QLE+ K DA+ T+ E K E E+++ L +AH A++QI + E I
Sbjct: 163 TAEQLERSKIDIVVAGTKDAI--TMVEGEAKEVTEEEMLQALMTAHEAIKQIVAFQEEVI 220
Query: 140 GNFTMEE----EPLINTFVTEEIRKYI 162
F +E+ EP N + E+ +YI
Sbjct: 221 KEFNVEKMPLPEPKYNVELVEKFVEYI 247
>sp|Q6WRU0|BST2_CRIGR Bone marrow stromal antigen 2 OS=Cricetulus griseus GN=Bst2 PE=1
SV=1
Length = 203
Score = 33.5 bits (75), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 46/100 (46%), Gaps = 10/100 (10%)
Query: 81 SLQDKLEKTVQQLEKEKDAL---DKTITRLEYKNFLEVEVIRPLYSAHIALRQIRLPKAE 137
+LQD LEK V Q++ EK AL + + + E E AHI +Q+R+ K E
Sbjct: 98 TLQDSLEKKVSQIQ-EKQALIQEQEAQIKEQEAQIKEQEAQIKEQKAHIQEQQVRIQKLE 156
Query: 138 G-IGNFTMEEEPLINTFVTEEIRKYITPKKNRVGKVNIYG 176
G + F E+ L EE IT K+N G + +
Sbjct: 157 GEVEEF---EQKLKKLRTAEE--ASITSKQNSAGSMAVSS 191
>sp|P59911|UBIE_HAEDU Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Haemophilus ducreyi (strain 35000HP / ATCC 700724)
GN=ubiE PE=3 SV=1
Length = 259
Score = 33.5 bits (75), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 75/174 (43%), Gaps = 30/174 (17%)
Query: 290 KEKPKWVAN--RSVPVDF-LISDILA-----------IKPGETRIG---LDFGVGTGTFA 332
+EK + VAN SV + L++D+L+ I R G LD GTG F+
Sbjct: 27 EEKQQLVANVFHSVAAKYDLMNDLLSFGIHRIWKRFTIDCSGVRKGQKVLDLAGGTGDFS 86
Query: 333 A---RMREQNVTIV-----STALNLGAPFNEMIALRGLIPLYVTLN-QRLPFFDNTMDLI 383
A R+ + +V S+ L +G + + G I YV N + LPF DNT D +
Sbjct: 87 AKFSRIVGETGQVVLADINSSMLEVGRDKLRNLGVVGNIN-YVQANAEHLPFADNTFDCV 145
Query: 384 HTTGFMDGWLDMLLLDFILFDWDRILRPGGLLWIDRFFCNKKDLDDYMYMFLQF 437
F G ++ D L R+L+PGG L + F D +Y F F
Sbjct: 146 -VISF--GLRNVTDKDKALKSMYRVLKPGGRLLVLEFSKPIFDPISQLYNFYSF 196
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.141 0.439
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 180,796,662
Number of Sequences: 539616
Number of extensions: 7922743
Number of successful extensions: 29722
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 128
Number of HSP's that attempted gapping in prelim test: 29623
Number of HSP's gapped (non-prelim): 200
length of query: 467
length of database: 191,569,459
effective HSP length: 121
effective length of query: 346
effective length of database: 126,275,923
effective search space: 43691469358
effective search space used: 43691469358
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 63 (28.9 bits)