Query 012236
Match_columns 467
No_of_seqs 185 out of 1388
Neff 8.6
Searched_HMMs 46136
Date Fri Mar 29 00:29:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012236.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012236hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1282 Serine carboxypeptidas 100.0 8E-119 2E-123 899.7 40.5 421 19-467 22-450 (454)
2 PLN02209 serine carboxypeptida 100.0 6E-110 1E-114 845.7 44.0 426 14-467 12-437 (437)
3 PLN03016 sinapoylglucose-malat 100.0 1E-108 2E-113 836.6 42.2 419 19-467 15-433 (433)
4 PF00450 Peptidase_S10: Serine 100.0 9E-103 2E-107 803.5 28.9 403 31-464 1-415 (415)
5 PTZ00472 serine carboxypeptida 100.0 5E-96 1E-100 753.3 37.9 388 35-467 41-461 (462)
6 PLN02213 sinapoylglucose-malat 100.0 1.2E-79 2.7E-84 606.2 30.8 319 119-467 1-319 (319)
7 COG2939 Carboxypeptidase C (ca 100.0 1.3E-69 2.8E-74 537.2 21.4 383 37-464 72-490 (498)
8 KOG1283 Serine carboxypeptidas 100.0 3.6E-70 7.9E-75 505.4 13.4 394 41-463 3-412 (414)
9 TIGR01250 pro_imino_pep_2 prol 99.1 2E-08 4.3E-13 96.6 20.9 129 42-216 3-132 (288)
10 PRK00870 haloalkane dehalogena 99.0 3.1E-08 6.7E-13 97.4 20.9 140 24-214 8-149 (302)
11 PHA02857 monoglyceride lipase; 99.0 5.2E-08 1.1E-12 94.4 21.8 124 53-217 10-134 (276)
12 TIGR03611 RutD pyrimidine util 99.0 6.8E-09 1.5E-13 98.3 14.3 116 57-217 2-117 (257)
13 PLN02824 hydrolase, alpha/beta 99.0 3.8E-08 8.2E-13 96.3 18.4 122 45-215 12-137 (294)
14 TIGR03056 bchO_mg_che_rel puta 99.0 4.2E-08 9.1E-13 94.5 18.4 123 45-217 10-132 (278)
15 PRK03204 haloalkane dehalogena 98.9 1.6E-07 3.5E-12 91.7 19.2 122 42-215 15-136 (286)
16 PLN02385 hydrolase; alpha/beta 98.9 2.2E-07 4.7E-12 93.5 19.5 126 53-216 71-198 (349)
17 PLN02298 hydrolase, alpha/beta 98.8 2.3E-07 5E-12 92.4 19.0 138 41-216 32-170 (330)
18 PRK10673 acyl-CoA esterase; Pr 98.8 1.4E-07 3E-12 89.9 15.0 104 65-213 11-114 (255)
19 TIGR03343 biphenyl_bphD 2-hydr 98.8 7.9E-07 1.7E-11 86.1 19.3 60 380-464 223-282 (282)
20 PRK03592 haloalkane dehalogena 98.7 1.3E-06 2.8E-11 85.5 20.5 120 45-217 11-130 (295)
21 PLN02679 hydrolase, alpha/beta 98.7 1.1E-06 2.3E-11 88.9 20.2 119 55-215 73-191 (360)
22 PLN03084 alpha/beta hydrolase 98.7 7E-07 1.5E-11 90.6 18.0 118 53-215 114-232 (383)
23 TIGR02240 PHA_depoly_arom poly 98.7 8.7E-07 1.9E-11 85.9 17.6 117 53-216 11-127 (276)
24 TIGR02427 protocat_pcaD 3-oxoa 98.6 3.2E-06 6.8E-11 79.1 17.4 59 380-463 193-251 (251)
25 KOG4178 Soluble epoxide hydrol 98.6 6.6E-06 1.4E-10 79.4 19.0 138 39-219 20-157 (322)
26 KOG4409 Predicted hydrolase/ac 98.6 1.7E-06 3.6E-11 83.9 14.7 132 43-218 67-198 (365)
27 PLN02652 hydrolase; alpha/beta 98.6 4.6E-06 1E-10 85.1 18.9 127 53-216 120-246 (395)
28 PLN02578 hydrolase 98.6 4.9E-06 1.1E-10 83.9 18.9 112 53-214 75-186 (354)
29 PRK14875 acetoin dehydrogenase 98.5 2.6E-06 5.7E-11 86.0 15.8 114 53-214 118-231 (371)
30 PRK10749 lysophospholipase L2; 98.5 1.9E-05 4.2E-10 78.7 21.5 125 53-216 40-167 (330)
31 PRK10349 carboxylesterase BioH 98.5 1.5E-06 3.2E-11 83.2 12.8 96 70-214 13-108 (256)
32 PLN02894 hydrolase, alpha/beta 98.4 6.2E-06 1.3E-10 84.6 15.8 119 55-215 93-211 (402)
33 TIGR01738 bioH putative pimelo 98.4 1.3E-05 2.8E-10 74.7 15.9 58 380-462 188-245 (245)
34 TIGR03695 menH_SHCHC 2-succiny 98.3 1E-05 2.2E-10 75.4 13.6 105 70-215 1-105 (251)
35 PLN03087 BODYGUARD 1 domain co 98.3 6E-05 1.3E-09 78.5 20.0 128 44-213 179-307 (481)
36 TIGR01607 PST-A Plasmodium sub 98.3 0.0001 2.2E-09 73.6 20.4 151 53-217 7-187 (332)
37 PRK08775 homoserine O-acetyltr 98.3 7.3E-06 1.6E-10 82.2 11.8 61 380-464 277-338 (343)
38 PLN02965 Probable pheophorbida 98.2 4.6E-05 1E-09 72.9 15.5 102 73-215 6-107 (255)
39 PRK07581 hypothetical protein; 98.1 0.00022 4.8E-09 71.3 17.8 59 380-463 275-334 (339)
40 PLN02980 2-oxoglutarate decarb 98.0 4.9E-05 1.1E-09 90.5 14.4 107 67-214 1368-1479(1655)
41 TIGR01249 pro_imino_pep_1 prol 98.0 2.6E-05 5.7E-10 76.8 10.3 126 43-216 6-131 (306)
42 COG1506 DAP2 Dipeptidyl aminop 98.0 5.3E-05 1.1E-09 82.0 11.5 132 53-217 375-509 (620)
43 PRK00175 metX homoserine O-ace 97.7 0.00084 1.8E-08 68.3 15.1 64 380-464 309-373 (379)
44 PF10340 DUF2424: Protein of u 97.7 0.00011 2.4E-09 73.1 8.1 132 56-219 106-239 (374)
45 PF12697 Abhydrolase_6: Alpha/ 97.7 8.7E-05 1.9E-09 68.0 7.1 104 73-218 1-104 (228)
46 PRK11126 2-succinyl-6-hydroxy- 97.7 0.00022 4.7E-09 67.2 9.6 100 70-214 2-101 (242)
47 PRK06489 hypothetical protein; 97.7 0.0004 8.6E-09 70.2 11.8 60 380-465 292-357 (360)
48 KOG1455 Lysophospholipase [Lip 97.5 0.018 3.9E-07 55.3 19.1 127 53-215 37-164 (313)
49 KOG1454 Predicted hydrolase/ac 97.4 0.0041 8.8E-08 61.8 14.2 60 380-464 264-323 (326)
50 PRK05077 frsA fermentation/res 97.3 0.0025 5.4E-08 65.6 11.7 120 55-216 180-301 (414)
51 PLN02872 triacylglycerol lipas 97.2 0.0047 1E-07 63.0 13.2 61 380-464 325-388 (395)
52 TIGR03101 hydr2_PEP hydrolase, 97.1 0.005 1.1E-07 59.3 11.1 125 53-218 9-137 (266)
53 PLN02211 methyl indole-3-aceta 97.0 0.0036 7.8E-08 60.6 8.9 107 68-215 16-122 (273)
54 TIGR01840 esterase_phb esteras 96.9 0.0036 7.8E-08 58.1 8.3 118 67-215 10-130 (212)
55 TIGR02821 fghA_ester_D S-formy 96.8 0.027 5.9E-07 54.5 13.4 42 167-218 135-176 (275)
56 PRK05855 short chain dehydroge 96.7 0.011 2.3E-07 63.4 10.8 97 53-184 12-108 (582)
57 PLN02511 hydrolase 96.6 0.029 6.4E-07 57.2 12.9 115 44-190 74-193 (388)
58 COG2267 PldB Lysophospholipase 96.5 0.034 7.3E-07 54.6 12.0 138 40-218 8-145 (298)
59 PLN02442 S-formylglutathione h 96.5 0.039 8.5E-07 53.7 12.2 57 149-218 125-181 (283)
60 COG0596 MhpC Predicted hydrola 96.4 0.025 5.4E-07 52.2 10.2 105 70-217 21-125 (282)
61 PRK10566 esterase; Provisional 96.4 0.018 3.9E-07 54.5 9.2 62 380-464 186-247 (249)
62 PF00561 Abhydrolase_1: alpha/ 96.0 0.012 2.7E-07 54.2 5.8 56 379-459 174-229 (230)
63 PRK10985 putative hydrolase; P 96.0 0.12 2.6E-06 51.2 13.0 46 380-450 255-300 (324)
64 TIGR03100 hydr1_PEP hydrolase, 95.9 0.1 2.2E-06 50.5 12.0 78 120-216 58-135 (274)
65 cd00707 Pancreat_lipase_like P 95.6 0.019 4.1E-07 55.7 5.4 82 118-214 65-146 (275)
66 PRK10115 protease 2; Provision 95.5 0.059 1.3E-06 59.1 9.4 130 52-219 425-563 (686)
67 KOG1515 Arylacetamide deacetyl 95.2 0.079 1.7E-06 52.6 8.2 131 53-218 71-210 (336)
68 TIGR00976 /NonD putative hydro 95.1 0.055 1.2E-06 57.9 7.4 129 53-218 6-135 (550)
69 PLN00021 chlorophyllase 95.0 0.47 1E-05 46.9 13.3 122 59-217 43-168 (313)
70 KOG4391 Predicted alpha/beta h 95.0 0.48 1E-05 43.5 11.9 123 53-217 64-186 (300)
71 KOG2564 Predicted acetyltransf 94.9 0.19 4.2E-06 47.8 9.3 107 67-212 71-179 (343)
72 TIGR03230 lipo_lipase lipoprot 94.8 0.094 2E-06 54.0 7.8 81 119-214 73-153 (442)
73 PF00326 Peptidase_S9: Prolyl 94.5 0.023 5E-07 52.5 2.5 90 119-219 14-103 (213)
74 PRK10162 acetyl esterase; Prov 94.5 0.13 2.8E-06 51.0 7.9 62 151-217 136-197 (318)
75 TIGR01392 homoserO_Ac_trn homo 94.4 0.086 1.9E-06 52.9 6.5 63 380-463 288-351 (351)
76 PF06500 DUF1100: Alpha/beta h 94.4 0.023 4.9E-07 57.5 2.0 80 120-217 219-298 (411)
77 PRK06765 homoserine O-acetyltr 94.0 0.13 2.9E-06 52.4 7.0 65 380-465 323-388 (389)
78 PRK11126 2-succinyl-6-hydroxy- 93.7 0.1 2.2E-06 48.9 5.1 54 380-464 188-241 (242)
79 KOG1838 Alpha/beta hydrolase [ 93.6 0.99 2.2E-05 45.7 12.0 120 56-215 107-236 (409)
80 TIGR01392 homoserO_Ac_trn homo 93.5 0.52 1.1E-05 47.2 10.2 127 53-215 15-162 (351)
81 PF12695 Abhydrolase_5: Alpha/ 93.5 0.17 3.7E-06 43.0 5.7 96 72-216 1-96 (145)
82 PF10230 DUF2305: Uncharacteri 93.3 0.71 1.5E-05 44.5 10.2 118 70-217 2-124 (266)
83 PF00975 Thioesterase: Thioest 92.9 0.4 8.6E-06 44.6 7.8 102 72-215 2-104 (229)
84 PF12697 Abhydrolase_6: Alpha/ 92.8 0.2 4.2E-06 45.4 5.4 51 380-455 176-226 (228)
85 KOG2100 Dipeptidyl aminopeptid 92.5 0.3 6.4E-06 54.2 7.1 144 42-218 499-647 (755)
86 PRK06489 hypothetical protein; 92.2 0.38 8.2E-06 48.5 7.1 141 38-214 38-188 (360)
87 PRK11071 esterase YqiA; Provis 92.0 0.53 1.2E-05 42.8 7.1 54 380-463 136-189 (190)
88 PRK11460 putative hydrolase; P 91.5 1.3 2.8E-05 41.7 9.4 37 153-190 87-123 (232)
89 PF08386 Abhydrolase_4: TAP-li 91.2 0.78 1.7E-05 37.3 6.6 60 380-464 34-93 (103)
90 cd00312 Esterase_lipase Estera 91.1 1.1 2.4E-05 47.1 9.5 37 151-188 158-194 (493)
91 PF10503 Esterase_phd: Esteras 91.1 0.97 2.1E-05 42.2 7.9 40 166-215 93-132 (220)
92 COG3509 LpqC Poly(3-hydroxybut 90.2 3.4 7.5E-05 39.9 10.7 129 53-215 44-179 (312)
93 PLN02454 triacylglycerol lipas 89.9 0.86 1.9E-05 46.3 6.8 69 146-217 205-273 (414)
94 PRK10566 esterase; Provisional 88.3 0.69 1.5E-05 43.5 4.8 111 56-190 13-127 (249)
95 PF00561 Abhydrolase_1: alpha/ 87.7 1.1 2.4E-05 40.9 5.7 74 121-214 2-78 (230)
96 PRK11460 putative hydrolase; P 87.3 0.81 1.8E-05 43.1 4.5 62 380-462 148-209 (232)
97 PF00326 Peptidase_S9: Prolyl 86.4 1.4 3.1E-05 40.5 5.6 63 379-462 143-206 (213)
98 PRK05855 short chain dehydroge 85.9 0.83 1.8E-05 48.8 4.3 59 380-464 233-291 (582)
99 PLN02511 hydrolase 85.7 0.96 2.1E-05 46.2 4.3 60 379-463 297-363 (388)
100 PF02230 Abhydrolase_2: Phosph 85.0 2.4 5.2E-05 39.2 6.4 59 148-218 85-143 (216)
101 PF01764 Lipase_3: Lipase (cla 84.2 2.2 4.7E-05 36.2 5.3 63 148-216 45-107 (140)
102 TIGR03100 hydr1_PEP hydrolase, 83.6 2.2 4.7E-05 41.1 5.6 71 375-463 202-273 (274)
103 cd00741 Lipase Lipase. Lipase 83.4 3.3 7.1E-05 35.9 6.2 60 148-215 9-68 (153)
104 PLN02571 triacylglycerol lipas 83.4 3.6 7.8E-05 42.0 7.1 70 147-217 204-277 (413)
105 PF05677 DUF818: Chlamydia CHL 82.4 2.9 6.3E-05 41.3 5.8 60 118-185 170-230 (365)
106 PRK05371 x-prolyl-dipeptidyl a 82.1 1.7 3.8E-05 48.3 4.7 87 119-217 279-375 (767)
107 PF03583 LIP: Secretory lipase 81.1 1.9 4.2E-05 42.1 4.2 65 380-466 219-286 (290)
108 KOG2382 Predicted alpha/beta h 80.9 1.3 2.8E-05 43.3 2.8 90 63-181 45-134 (315)
109 TIGR01836 PHA_synth_III_C poly 80.8 3 6.4E-05 41.8 5.6 61 380-464 286-349 (350)
110 PF11144 DUF2920: Protein of u 80.7 3.3 7.1E-05 42.0 5.6 60 149-218 162-222 (403)
111 PF06057 VirJ: Bacterial virul 80.6 3.5 7.6E-05 37.3 5.3 65 144-217 45-109 (192)
112 PLN02211 methyl indole-3-aceta 80.4 3.9 8.5E-05 39.4 6.1 59 380-464 211-269 (273)
113 COG0657 Aes Esterase/lipase [L 80.0 31 0.00068 33.7 12.5 85 120-219 111-195 (312)
114 cd00519 Lipase_3 Lipase (class 79.9 4.1 9E-05 38.0 5.9 61 148-216 109-169 (229)
115 TIGR03502 lipase_Pla1_cef extr 78.7 10 0.00022 42.1 9.2 99 69-190 448-575 (792)
116 COG0596 MhpC Predicted hydrola 78.5 6.1 0.00013 35.8 6.6 62 377-462 218-279 (282)
117 PF10081 Abhydrolase_9: Alpha/ 78.4 4.7 0.0001 38.8 5.6 63 121-183 33-122 (289)
118 PF11288 DUF3089: Protein of u 78.3 3.1 6.8E-05 38.3 4.3 45 149-195 76-120 (207)
119 PF02129 Peptidase_S15: X-Pro 77.9 1.8 4E-05 41.6 2.9 82 120-218 58-139 (272)
120 PRK10252 entF enterobactin syn 77.9 16 0.00034 43.5 11.2 103 70-214 1068-1170(1296)
121 PF02230 Abhydrolase_2: Phosph 77.9 2 4.4E-05 39.7 3.1 59 380-463 155-213 (216)
122 PF12695 Abhydrolase_5: Alpha/ 77.6 4.1 8.8E-05 34.3 4.7 44 378-445 102-145 (145)
123 TIGR01249 pro_imino_pep_1 prol 76.9 6 0.00013 38.7 6.3 43 380-447 248-290 (306)
124 PLN02753 triacylglycerol lipas 76.4 7.2 0.00016 40.9 6.8 73 145-217 285-361 (531)
125 COG0400 Predicted esterase [Ge 76.1 3.4 7.5E-05 38.1 4.0 60 379-464 145-204 (207)
126 PF07859 Abhydrolase_3: alpha/ 76.0 3.5 7.6E-05 37.6 4.1 63 148-217 47-112 (211)
127 PLN02719 triacylglycerol lipas 74.8 8.4 0.00018 40.3 6.7 70 147-216 273-346 (518)
128 COG2272 PnbA Carboxylesterase 74.4 25 0.00054 36.6 10.0 110 55-187 79-197 (491)
129 PF05728 UPF0227: Uncharacteri 73.7 4.5 9.7E-05 36.7 4.1 39 169-220 58-96 (187)
130 PF08237 PE-PPE: PE-PPE domain 73.1 13 0.00027 34.9 7.0 86 121-214 4-89 (225)
131 KOG2183 Prolylcarboxypeptidase 72.8 5.8 0.00013 40.1 4.8 67 119-188 111-185 (492)
132 PRK10439 enterobactin/ferric e 72.4 25 0.00054 36.2 9.6 36 170-215 288-323 (411)
133 KOG4627 Kynurenine formamidase 72.0 2.5 5.4E-05 38.6 2.0 73 130-217 102-174 (270)
134 PF05990 DUF900: Alpha/beta hy 71.9 6.6 0.00014 37.0 4.9 67 148-218 74-140 (233)
135 PRK13604 luxD acyl transferase 71.5 7.1 0.00015 38.3 5.1 45 380-447 202-246 (307)
136 PLN02733 phosphatidylcholine-s 71.0 8.5 0.00018 39.9 5.8 41 147-190 142-182 (440)
137 KOG3101 Esterase D [General fu 70.8 34 0.00073 31.7 8.8 143 55-219 27-180 (283)
138 smart00824 PKS_TE Thioesterase 69.9 21 0.00045 31.8 7.7 76 119-213 25-100 (212)
139 PF05577 Peptidase_S28: Serine 69.5 5.5 0.00012 41.2 4.2 67 145-221 88-154 (434)
140 PLN02761 lipase class 3 family 68.6 14 0.00031 38.7 6.8 71 147-217 268-344 (527)
141 PLN02324 triacylglycerol lipas 68.5 16 0.00034 37.4 6.9 47 147-194 193-239 (415)
142 PRK10985 putative hydrolase; P 68.0 11 0.00024 37.2 5.8 114 46-190 36-151 (324)
143 COG4099 Predicted peptidase [G 66.6 89 0.0019 30.6 11.0 120 50-193 168-292 (387)
144 COG4425 Predicted membrane pro 66.5 15 0.00032 37.7 6.1 36 147-182 374-409 (588)
145 COG2267 PldB Lysophospholipase 66.1 12 0.00026 36.7 5.6 65 378-465 226-294 (298)
146 PRK04940 hypothetical protein; 66.0 16 0.00034 32.9 5.8 37 170-219 60-96 (180)
147 COG0400 Predicted esterase [Ge 65.3 40 0.00086 31.1 8.5 79 146-235 76-157 (207)
148 TIGR01838 PHA_synth_I poly(R)- 64.5 8.3 0.00018 41.0 4.3 85 120-218 221-305 (532)
149 KOG1552 Predicted alpha/beta h 64.5 11 0.00023 35.9 4.5 107 68-217 58-165 (258)
150 KOG3975 Uncharacterized conser 63.5 46 0.001 31.6 8.4 39 145-188 90-128 (301)
151 PF06342 DUF1057: Alpha/beta h 63.2 77 0.0017 30.8 10.0 89 369-461 201-295 (297)
152 PRK14567 triosephosphate isome 61.5 20 0.00044 34.2 5.9 61 147-218 178-238 (253)
153 PRK14566 triosephosphate isome 61.3 22 0.00047 34.1 6.1 61 147-218 188-248 (260)
154 PF11187 DUF2974: Protein of u 58.8 22 0.00047 33.3 5.6 52 152-213 70-121 (224)
155 PLN02310 triacylglycerol lipas 58.1 23 0.0005 36.1 5.9 64 148-216 186-250 (405)
156 PRK06765 homoserine O-acetyltr 58.0 45 0.00098 34.0 8.2 126 53-214 40-195 (389)
157 PRK13604 luxD acyl transferase 57.7 94 0.002 30.6 10.0 123 53-217 19-143 (307)
158 TIGR01836 PHA_synth_III_C poly 57.6 21 0.00045 35.7 5.7 79 120-218 95-174 (350)
159 COG3319 Thioesterase domains o 57.6 97 0.0021 29.7 9.8 103 71-216 1-104 (257)
160 PF00151 Lipase: Lipase; Inte 56.7 3.6 7.7E-05 41.0 -0.1 71 118-193 103-173 (331)
161 COG2945 Predicted hydrolase of 56.4 12 0.00025 34.0 3.2 55 130-191 70-124 (210)
162 PF12146 Hydrolase_4: Putative 56.4 81 0.0018 24.0 7.5 78 54-158 2-79 (79)
163 KOG1552 Predicted alpha/beta h 55.9 37 0.00081 32.3 6.6 58 381-463 193-250 (258)
164 PLN00413 triacylglycerol lipas 55.4 15 0.00033 38.0 4.2 39 152-193 269-307 (479)
165 PRK05077 frsA fermentation/res 54.8 22 0.00047 36.7 5.3 58 380-465 355-412 (414)
166 PLN02408 phospholipase A1 54.4 19 0.00041 36.2 4.7 46 148-194 179-224 (365)
167 PF07519 Tannase: Tannase and 53.7 22 0.00048 37.3 5.3 80 372-464 345-426 (474)
168 PF00756 Esterase: Putative es 53.1 30 0.00065 32.3 5.7 56 149-218 98-153 (251)
169 PLN02802 triacylglycerol lipas 52.6 32 0.00069 36.1 6.0 64 148-216 309-372 (509)
170 PF07172 GRP: Glycine rich pro 51.7 9.9 0.00021 30.4 1.8 26 1-26 1-28 (95)
171 KOG2551 Phospholipase/carboxyh 51.6 34 0.00074 31.8 5.4 58 380-463 163-222 (230)
172 PF05057 DUF676: Putative seri 51.3 24 0.00051 32.8 4.5 50 145-195 54-103 (217)
173 PRK11071 esterase YqiA; Provis 50.3 25 0.00054 31.8 4.4 78 71-190 2-81 (190)
174 PF06259 Abhydrolase_8: Alpha/ 49.9 34 0.00073 30.8 5.1 67 118-190 62-129 (177)
175 PLN02847 triacylglycerol lipas 49.1 33 0.00071 36.7 5.5 61 150-218 234-295 (633)
176 PF05448 AXE1: Acetyl xylan es 48.6 71 0.0015 31.6 7.7 141 53-216 66-210 (320)
177 COG0627 Predicted esterase [Ge 48.2 30 0.00064 34.2 4.9 132 69-218 52-190 (316)
178 COG4757 Predicted alpha/beta h 47.5 46 0.001 31.3 5.6 66 120-189 58-124 (281)
179 PLN02934 triacylglycerol lipas 47.4 27 0.00059 36.6 4.6 40 151-193 305-344 (515)
180 PF08840 BAAT_C: BAAT / Acyl-C 46.7 22 0.00048 32.8 3.6 45 159-214 11-55 (213)
181 PLN02162 triacylglycerol lipas 45.4 27 0.00058 36.3 4.1 39 152-193 263-301 (475)
182 KOG3079 Uridylate kinase/adeny 45.2 11 0.00024 33.9 1.3 17 68-84 5-21 (195)
183 COG3208 GrsT Predicted thioest 44.1 37 0.00081 32.0 4.5 65 120-194 34-98 (244)
184 PF09292 Neil1-DNA_bind: Endon 43.9 14 0.0003 23.7 1.2 12 70-81 24-35 (39)
185 PLN03037 lipase class 3 family 42.6 52 0.0011 34.6 5.8 47 148-194 295-342 (525)
186 KOG2281 Dipeptidyl aminopeptid 42.5 93 0.002 33.7 7.5 113 68-219 640-766 (867)
187 COG0429 Predicted hydrolase of 42.1 47 0.001 32.9 5.1 121 52-214 59-185 (345)
188 PF03959 FSH1: Serine hydrolas 41.4 22 0.00048 32.7 2.7 49 380-453 161-209 (212)
189 KOG4569 Predicted lipase [Lipi 40.2 56 0.0012 32.6 5.5 59 151-215 155-213 (336)
190 PLN02429 triosephosphate isome 40.1 64 0.0014 31.8 5.7 60 148-218 239-299 (315)
191 PLN02442 S-formylglutathione h 40.0 41 0.00089 32.5 4.5 49 378-447 215-264 (283)
192 KOG2984 Predicted hydrolase [G 39.6 20 0.00044 32.8 2.0 102 53-190 30-134 (277)
193 TIGR01838 PHA_synth_I poly(R)- 39.4 1.5E+02 0.0032 31.7 8.7 48 380-452 415-462 (532)
194 PF08139 LPAM_1: Prokaryotic m 39.2 22 0.00048 20.8 1.4 13 2-14 8-20 (25)
195 PF00681 Plectin: Plectin repe 38.5 16 0.00034 24.6 0.9 33 212-244 11-43 (45)
196 KOG1553 Predicted alpha/beta h 37.6 78 0.0017 31.5 5.7 61 141-216 286-346 (517)
197 COG1073 Hydrolases of the alph 37.5 67 0.0014 30.2 5.5 62 381-465 233-297 (299)
198 PF15613 WHIM2: WSTF, HB1, Itc 37.3 66 0.0014 20.9 3.6 28 54-81 11-38 (38)
199 cd00311 TIM Triosephosphate is 37.3 96 0.0021 29.4 6.3 59 148-218 176-235 (242)
200 PF08840 BAAT_C: BAAT / Acyl-C 35.8 24 0.00052 32.6 2.0 48 380-446 115-163 (213)
201 PF07389 DUF1500: Protein of u 35.7 27 0.00059 27.0 1.9 34 152-193 8-41 (100)
202 PF03403 PAF-AH_p_II: Platelet 35.3 23 0.0005 36.0 1.9 38 171-219 229-266 (379)
203 PLN02561 triosephosphate isome 33.4 1E+02 0.0022 29.5 5.8 59 148-217 180-239 (253)
204 PF02450 LCAT: Lecithin:choles 32.7 39 0.00085 34.4 3.1 62 152-217 101-163 (389)
205 COG0221 Ppa Inorganic pyrophos 32.6 89 0.0019 27.9 4.9 66 109-174 24-148 (171)
206 PTZ00333 triosephosphate isome 31.5 1.1E+02 0.0024 29.2 5.7 60 147-217 182-242 (255)
207 PRK00042 tpiA triosephosphate 31.5 1.4E+02 0.003 28.5 6.4 59 148-218 180-239 (250)
208 COG0218 Predicted GTPase [Gene 31.4 64 0.0014 29.5 3.9 63 67-136 20-85 (200)
209 PF12740 Chlorophyllase2: Chlo 30.5 1.1E+02 0.0023 29.4 5.4 64 145-215 62-131 (259)
210 PF15253 STIL_N: SCL-interrupt 30.5 59 0.0013 33.1 3.8 36 40-78 199-235 (410)
211 PF06821 Ser_hydrolase: Serine 29.9 76 0.0017 28.2 4.1 54 381-460 115-171 (171)
212 PF03096 Ndr: Ndr family; Int 29.4 28 0.0006 33.7 1.3 90 117-228 53-143 (283)
213 PRK06762 hypothetical protein; 28.7 31 0.00067 30.1 1.4 21 71-91 2-24 (166)
214 PF03283 PAE: Pectinacetyleste 28.6 4.6E+02 0.01 26.4 9.9 154 54-216 35-198 (361)
215 PF04202 Mfp-3: Foot protein 3 28.4 80 0.0017 23.1 3.1 33 1-34 1-33 (71)
216 COG3571 Predicted hydrolase of 28.2 73 0.0016 28.2 3.5 28 166-193 85-112 (213)
217 PRK07868 acyl-CoA synthetase; 27.5 84 0.0018 36.4 5.0 60 380-464 297-360 (994)
218 COG3896 Chloramphenicol 3-O-ph 27.2 56 0.0012 28.8 2.6 27 70-96 22-52 (205)
219 COG3208 GrsT Predicted thioest 26.8 1.4E+02 0.003 28.3 5.3 59 380-463 176-234 (244)
220 PF01083 Cutinase: Cutinase; 26.6 1.3E+02 0.0029 26.8 5.2 83 122-217 42-125 (179)
221 cd00412 pyrophosphatase Inorga 26.6 2.3E+02 0.005 24.8 6.4 44 147-194 109-152 (155)
222 KOG3043 Predicted hydrolase re 26.4 1.1E+02 0.0025 28.5 4.6 72 380-463 164-238 (242)
223 PF06821 Ser_hydrolase: Serine 25.9 80 0.0017 28.0 3.6 52 155-216 41-92 (171)
224 PF07819 PGAP1: PGAP1-like pro 25.9 89 0.0019 29.1 4.0 94 70-184 4-99 (225)
225 COG2819 Predicted hydrolase of 25.7 5.6E+02 0.012 24.6 9.3 41 150-194 113-158 (264)
226 KOG2565 Predicted hydrolases o 25.6 3.9E+02 0.0085 27.2 8.4 133 52-218 132-267 (469)
227 PF07849 DUF1641: Protein of u 25.3 26 0.00055 23.3 0.2 16 331-346 17-32 (42)
228 PF01583 APS_kinase: Adenylyls 24.4 41 0.00088 29.6 1.3 14 70-83 1-14 (156)
229 PF04414 tRNA_deacylase: D-ami 23.9 1.7E+02 0.0036 27.2 5.3 48 144-194 104-152 (213)
230 PRK13962 bifunctional phosphog 23.7 1.5E+02 0.0032 32.4 5.6 61 147-218 574-635 (645)
231 KOG2682 NAD-dependent histone 23.4 39 0.00085 31.6 1.0 64 120-194 37-114 (314)
232 PF05049 IIGP: Interferon-indu 22.8 30 0.00065 35.0 0.2 63 68-132 32-97 (376)
233 KOG3724 Negative regulator of 22.0 1.2E+02 0.0026 33.7 4.4 94 73-186 92-198 (973)
234 COG0529 CysC Adenylylsulfate k 21.8 1E+02 0.0022 27.8 3.3 29 68-96 20-54 (197)
235 PRK14565 triosephosphate isome 21.6 1.8E+02 0.0039 27.5 5.1 53 147-218 173-225 (237)
236 PF14020 DUF4236: Protein of u 21.2 1.1E+02 0.0023 21.8 2.7 15 121-136 40-54 (55)
237 PF10929 DUF2811: Protein of u 21.2 79 0.0017 22.6 2.0 22 148-169 5-26 (57)
238 PF10609 ParA: ParA/MinD ATPas 21.0 60 0.0013 25.1 1.5 12 121-132 2-13 (81)
239 PLN02517 phosphatidylcholine-s 20.8 96 0.0021 33.4 3.4 40 151-190 193-233 (642)
240 PF10503 Esterase_phd: Esteras 20.6 85 0.0018 29.3 2.7 26 380-405 169-194 (220)
241 PF06309 Torsin: Torsin; Inte 20.4 80 0.0017 26.7 2.2 17 67-83 49-65 (127)
No 1
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=100.00 E-value=7.9e-119 Score=899.70 Aligned_cols=421 Identities=50% Similarity=0.872 Sum_probs=375.4
Q ss_pred hccCCCCccccCCCCCCCCCceeEeeeEEecCCCCceEEEEEEecCCCCCCCCEEEEECCCCchHHHhHHHHhhCceEEe
Q 012236 19 QLIDSRSTVKFLPGFQGPLSFELETGYVGVGESEDAQLFYYFVKSEKNPKEDPLLLWLTGGPGCSAFSALVYEIGPINFN 98 (467)
Q Consensus 19 ~~~~~~~~v~~lp~~~~~~~~~~~sGy~~~~~~~~~~lfy~f~es~~~~~~~p~~lwlnGGPG~Ss~~g~~~E~GP~~~~ 98 (467)
..++.+++|+.|||...++++++|||||+|+++.+++||||||||+++|+++||||||||||||||+.|+|.|+|||+++
T Consensus 22 ~~~~~~~~I~~LPG~~~~~~f~~ysGYv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~G~~~E~GPf~v~ 101 (454)
T KOG1282|consen 22 HHVDEADLIKSLPGQPGPLPFKQYSGYVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLGGLFEENGPFRVK 101 (454)
T ss_pred cccchhhhhhcCCCCCCCCCcccccceEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccchhhhhhhcCCeEEc
Confidence 35667889999999987899999999999998888999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCcceeCCCCcccCCceEEEecCCccccccccCCCCcccCchHHHHHHHHHHHHHHHHCCCCCCCCeEEEecc
Q 012236 99 ILEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGFSYVRTPLASQTGDFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDS 178 (467)
Q Consensus 99 ~~~~~~~~~~~~~n~~sW~~~an~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GES 178 (467)
.++ . +|..||||||+.||||||||||||||||+++..++.++|+.+|+|++.||++||++||||++|+|||+|||
T Consensus 102 ~~G---~--tL~~N~ySWnk~aNiLfLd~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GES 176 (454)
T KOG1282|consen 102 YNG---K--TLYLNPYSWNKEANILFLDQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGES 176 (454)
T ss_pred CCC---C--cceeCCccccccccEEEEecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEeccc
Confidence 643 2 59999999999999999999999999999988877789999999999999999999999999999999999
Q ss_pred CCccchHHHHHHHHhhcccCCCCceeeeEeEecCCccCcccccccccccccccCCCCHHHHHHHHHHhCC---CCcccCC
Q 012236 179 YSGITVPPLVQQISNENEEGIKPLINLQGYILGNPKTDKIVDKNSQIPFAHGMGLISNELYESLKITCGG---DYANIDP 255 (467)
Q Consensus 179 YgG~yvP~lA~~i~~~n~~~~~~~inLkGi~iGng~i~p~~q~~~~~~~~~~~gli~~~~~~~~~~~c~~---~~~~~~~ 255 (467)
|||||||.||++|+++|+....+.|||||++||||++|+..|..++.+|++.||+|+++.++.+++.|.. ++....+
T Consensus 177 YAG~YVP~La~~I~~~N~~~~~~~iNLkG~~IGNg~td~~~~~~~~~~~a~~h~liSde~~~~l~~~C~~~~~~~~~~~~ 256 (454)
T KOG1282|consen 177 YAGHYVPALAQEILKGNKKCCKPNINLKGYAIGNGLTDPEIDYNGRIPFAWGHGLISDELYESLKRACDFSSDNYANVDP 256 (454)
T ss_pred ccceehHHHHHHHHhccccccCCcccceEEEecCcccCccccccchhhhhhhcccCCHHHHHHHHHHhccCcccccccCC
Confidence 9999999999999999976556789999999999999999999999999999999999999999999987 4444445
Q ss_pred CchhHHHHHHHHH-HHhcCCCCCCCCCCCCCCCCCCCCCCCcccCCCcccccccccCCCCCCCCCCCcccccccchhccc
Q 012236 256 SNVDCLNDNQAFS-ELISGLDQNHILEPRCPFFSPKPRDSNGKRRSLNDNEKSQEFLDPEPALPSIGCRSFGYMLSQNWE 334 (467)
Q Consensus 256 ~~~~C~~~~~~~~-~~~~~~~~y~i~~~~C~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~yl 334 (467)
.+..|..+++.+. .+.++++.|+++.+.|....+.. .. ...+...++|... .. ++||
T Consensus 257 ~~~~C~~~~~~~~~~~~~~i~~y~i~~~~C~~~~~~~-------~~------------~~~~~~~~~c~~~--~~-~~yl 314 (454)
T KOG1282|consen 257 SNTKCNKAVEEFDSKTTGDIDNYYILTPDCYPTSYEL-------KK------------PTDCYGYDPCLSD--YA-EKYL 314 (454)
T ss_pred chhHHHHHHHHHHHHHhccCchhhhcchhhccccccc-------cc------------cccccccCCchhh--hH-HHhc
Confidence 5778999999887 77789999999988896511100 00 0113344677432 22 6799
Q ss_pred CcHHHHHHcCCCCCCCCCcccccCCc--cccccCCchHHHHHHhhhcC-CeEEEEcCCCccccCchhHHHHHHhcCCCCc
Q 012236 335 NDYNVRKALQIRQGSKGKWQRCNYDL--PYTQEIGSSFSFHVSLSTKG-YRSLIYSGDHDMVVPFLGTEAWIKSLNYSII 411 (467)
Q Consensus 335 N~~~Vk~aLhv~~~~~~~w~~cs~~v--~~~~d~~~~~~~~~~LL~~~-irVLiY~Gd~D~i~n~~Gt~~wi~~L~w~~~ 411 (467)
|+++||+||||+.....+|+.||+.+ .|..+..++++.+..++.++ +|||||+||.|++||+.||++|+++|+++..
T Consensus 315 N~~~VrkALh~~~~~~~~W~~Cn~~v~~~~~~~~~sm~p~~~~~~~~~~~rvliysGD~D~~~p~~gt~~~i~~L~~~~~ 394 (454)
T KOG1282|consen 315 NRPEVRKALHANKTSIGKWERCNDEVNYNYNDDIKSMLPIHKKLIASGGYRVLIYSGDHDLVVPFLGTQAWIKSLNLSIT 394 (454)
T ss_pred CCHHHHHHhCCCCCCCCcccccChhhhcccccCccchHHHHHHHhhcCceEEEEEeCCcceeCcchhhHHHHHhccCccc
Confidence 99999999999876322799999987 46778889999999998865 9999999999999999999999999999999
Q ss_pred cCccceeeC-CeeeeEEEEEecceEEEEEcCCcccccCCChHHHHHHHHHHHcCCCC
Q 012236 412 DDWRPWILH-SQVAGYTRTYSNRMTYATVKGGGHIAPEYRPAECYAMFQRWINHDPL 467 (467)
Q Consensus 412 ~~~~~w~~~-~~~aG~~k~~~~~Ltf~~V~~AGHmvP~DqP~~a~~m~~~fl~~~~l 467 (467)
.+|+||+++ +|++||+++|+ +|||+||+|||||||+|||++|++||++||+|++|
T Consensus 395 ~~~~pW~~~~~qvaG~~~~Y~-~ltf~tVrGaGH~VP~~~p~~al~m~~~fl~g~~l 450 (454)
T KOG1282|consen 395 DEWRPWYHKGGQVAGYTKTYG-GLTFATVRGAGHMVPYDKPESALIMFQRFLNGQPL 450 (454)
T ss_pred cCccCCccCCCceeeeEEEec-CEEEEEEeCCcccCCCCCcHHHHHHHHHHHcCCCC
Confidence 999999995 89999999996 59999999999999999999999999999999986
No 2
>PLN02209 serine carboxypeptidase
Probab=100.00 E-value=6.2e-110 Score=845.67 Aligned_cols=426 Identities=54% Similarity=1.024 Sum_probs=366.6
Q ss_pred HHHhhhccCCCCccccCCCCCCCCCceeEeeeEEecCCCCceEEEEEEecCCCCCCCCEEEEECCCCchHHHhHHHHhhC
Q 012236 14 LQLCMQLIDSRSTVKFLPGFQGPLSFELETGYVGVGESEDAQLFYYFVKSEKNPKEDPLLLWLTGGPGCSAFSALVYEIG 93 (467)
Q Consensus 14 ~~~~~~~~~~~~~v~~lp~~~~~~~~~~~sGy~~~~~~~~~~lfy~f~es~~~~~~~p~~lwlnGGPG~Ss~~g~~~E~G 93 (467)
++..+.++++.++|++|||+.++++++++|||++|+++.+++||||||||+++++++||||||||||||||+.|+|.|+|
T Consensus 12 ~~~~~~~~~~~~~v~~lpg~~~~~~~~~~sGy~~v~~~~~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~e~G 91 (437)
T PLN02209 12 LLVSSHHVRSGSIVKFLPGFKGPLPFELETGYIGIGEEENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCLSGLFFENG 91 (437)
T ss_pred HHHhcccCCccCeeecCCCCCCCCCeeEEEEEEEecCCCCeEEEEEEEecCCCCCCCCEEEEECCCCcHHHhhhHHHhcC
Confidence 45555667788899999999888999999999999877678999999999999999999999999999999999999999
Q ss_pred ceEEeccCCCCCCCcceeCCCCcccCCceEEEecCCccccccccCCCCcccCchHHHHHHHHHHHHHHHHCCCCCCCCeE
Q 012236 94 PINFNILEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGFSYVRTPLASQTGDFKQVHQVDQFLRKWLMDHPEFLSNPFY 173 (467)
Q Consensus 94 P~~~~~~~~~~~~~~~~~n~~sW~~~an~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fL~~F~~~fp~~~~~~~~ 173 (467)
||+++.++.+++..++++||||||+.|||||||||+||||||++..... .+++++|+++++||+.||++||+|+++|||
T Consensus 92 P~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~-~~~~~~a~~~~~fl~~f~~~~p~~~~~~~y 170 (437)
T PLN02209 92 PLALKNKVYNGSVPSLVSTTYSWTKTANIIFLDQPVGSGFSYSKTPIER-TSDTSEVKKIHEFLQKWLIKHPQFLSNPFY 170 (437)
T ss_pred CceeccCCCCCCcccceeCCCchhhcCcEEEecCCCCCCccCCCCCCCc-cCCHHHHHHHHHHHHHHHHhCccccCCCEE
Confidence 9999875433333469999999999999999999999999998765444 456677899999999999999999999999
Q ss_pred EEeccCCccchHHHHHHHHhhcccCCCCceeeeEeEecCCccCcccccccccccccccCCCCHHHHHHHHHHhCCCCccc
Q 012236 174 VGGDSYSGITVPPLVQQISNENEEGIKPLINLQGYILGNPKTDKIVDKNSQIPFAHGMGLISNELYESLKITCGGDYANI 253 (467)
Q Consensus 174 i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~iGng~i~p~~q~~~~~~~~~~~gli~~~~~~~~~~~c~~~~~~~ 253 (467)
|+||||||||||.||++|+++|++...++||||||+|||||+||..|..++.+|++.+|+|++++++.+++.|...+...
T Consensus 171 i~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~td~~~q~~~~~~y~~~~glI~~~~~~~~~~~c~~~~~~~ 250 (437)
T PLN02209 171 VVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNPITHIEFEQNFRIPYAHGMSLISDELYESLKRICKGNYFSV 250 (437)
T ss_pred EEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecCcccChhhhhhhHHHHHhccCCCCHHHHHHHHHhcccccccC
Confidence 99999999999999999999886555678999999999999999999999999999999999999999999997643322
Q ss_pred CCCchhHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCCCCcccCCCcccccccccCCCCCCCCCCCcccccccchhcc
Q 012236 254 DPSNVDCLNDNQAFSELISGLDQNHILEPRCPFFSPKPRDSNGKRRSLNDNEKSQEFLDPEPALPSIGCRSFGYMLSQNW 333 (467)
Q Consensus 254 ~~~~~~C~~~~~~~~~~~~~~~~y~i~~~~C~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~y 333 (467)
.+.+..|.++++....|.+.++.|+++...|... ..++ ....|..+....++.|
T Consensus 251 ~~~~~~C~~~i~~~~~~~~~~~~~~~~~~~c~~~------------~~~~--------------~~~~c~~~~~~~~~~y 304 (437)
T PLN02209 251 DPSNKKCLKLVEEYHKCTDNINSHHTLIANCDDS------------NTQH--------------ISPDCYYYPYHLVECW 304 (437)
T ss_pred CCChHHHHHHHHHHHHHhhcCCcccccccccccc------------cccc--------------CCCCcccccHHHHHHH
Confidence 3446789999988888888888887655556421 0000 0124533323346789
Q ss_pred cCcHHHHHHcCCCCCCCCCcccccCCccccccCCchHHHHHHhhhcCCeEEEEcCCCccccCchhHHHHHHhcCCCCccC
Q 012236 334 ENDYNVRKALQIRQGSKGKWQRCNYDLPYTQEIGSSFSFHVSLSTKGYRSLIYSGDHDMVVPFLGTEAWIKSLNYSIIDD 413 (467)
Q Consensus 334 lN~~~Vk~aLhv~~~~~~~w~~cs~~v~~~~d~~~~~~~~~~LL~~~irVLiY~Gd~D~i~n~~Gt~~wi~~L~w~~~~~ 413 (467)
||+++||+||||+......|..|+..+.+..|..++++.+..+|++++|||||+||.|++||+.||++|+++|+|+++++
T Consensus 305 lN~~~V~~aL~v~~~~~~~w~~~~~~~~~~~d~~~~~~~~~~~l~~girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~ 384 (437)
T PLN02209 305 ANNESVREALHVDKGSIGEWIRDHRGIPYKSDIRSSIPYHMNNSINGYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDD 384 (437)
T ss_pred hCCHHHHHHhCCCCCCCCCCccccchhhcccchhhhHHHHHHHHhcCceEEEEECCccccCCcHhHHHHHHhcCCccCCC
Confidence 99999999999985434579999977667777777777777777789999999999999999999999999999999999
Q ss_pred ccceeeCCeeeeEEEEEecceEEEEEcCCcccccCCChHHHHHHHHHHHcCCCC
Q 012236 414 WRPWILHSQVAGYTRTYSNRMTYATVKGGGHIAPEYRPAECYAMFQRWINHDPL 467 (467)
Q Consensus 414 ~~~w~~~~~~aG~~k~~~~~Ltf~~V~~AGHmvP~DqP~~a~~m~~~fl~~~~l 467 (467)
|++|+++++++||+|+|+++|||++|++|||||| |||++|++||++||.+++|
T Consensus 385 ~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp-~qP~~al~m~~~fi~~~~l 437 (437)
T PLN02209 385 WRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAE-YLPEESSIMFQRWISGQPL 437 (437)
T ss_pred eeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcC-cCHHHHHHHHHHHHcCCCC
Confidence 9999999999999999953599999999999998 6999999999999999986
No 3
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=100.00 E-value=1.1e-108 Score=836.55 Aligned_cols=419 Identities=56% Similarity=1.078 Sum_probs=363.5
Q ss_pred hccCCCCccccCCCCCCCCCceeEeeeEEecCCCCceEEEEEEecCCCCCCCCEEEEECCCCchHHHhHHHHhhCceEEe
Q 012236 19 QLIDSRSTVKFLPGFQGPLSFELETGYVGVGESEDAQLFYYFVKSEKNPKEDPLLLWLTGGPGCSAFSALVYEIGPINFN 98 (467)
Q Consensus 19 ~~~~~~~~v~~lp~~~~~~~~~~~sGy~~~~~~~~~~lfy~f~es~~~~~~~p~~lwlnGGPG~Ss~~g~~~E~GP~~~~ 98 (467)
.|++..+.|++|||+.++++++++|||++|+++.+.+||||||||+++++++|+||||||||||||+.|+|+|+|||+++
T Consensus 15 ~~~~~~~~v~~lpg~~~~~~~~~~sGy~~v~~~~~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~ 94 (433)
T PLN03016 15 HHVDSASIVKFLPGFEGPLPFELETGYIGIGEDENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCLGGIIFENGPVGLK 94 (433)
T ss_pred hcccccCeeecCcCCCCCCCeeEEEEEEEecCCCCeEEEEEEEecCCCcccCCEEEEEcCCCcHHHHHHHHHhcCCceee
Confidence 34456688999999977889999999999987667899999999999999999999999999999999999999999997
Q ss_pred ccCCCCCCCcceeCCCCcccCCceEEEecCCccccccccCCCCcccCchHHHHHHHHHHHHHHHHCCCCCCCCeEEEecc
Q 012236 99 ILEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGFSYVRTPLASQTGDFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDS 178 (467)
Q Consensus 99 ~~~~~~~~~~~~~n~~sW~~~an~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GES 178 (467)
.+..++..+++++||+||+++|||||||||+||||||++..... .+++++|+++++||++||++||+|+++||||+|||
T Consensus 95 ~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~-~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GES 173 (433)
T PLN03016 95 FEVFNGSAPSLFSTTYSWTKMANIIFLDQPVGSGFSYSKTPIDK-TGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDS 173 (433)
T ss_pred ccccCCCCCceeeCCCchhhcCcEEEecCCCCCCccCCCCCCCc-cCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccC
Confidence 53212222469999999999999999999999999998765544 45667779999999999999999999999999999
Q ss_pred CCccchHHHHHHHHhhcccCCCCceeeeEeEecCCccCcccccccccccccccCCCCHHHHHHHHHHhCCCCcccCCCch
Q 012236 179 YSGITVPPLVQQISNENEEGIKPLINLQGYILGNPKTDKIVDKNSQIPFAHGMGLISNELYESLKITCGGDYANIDPSNV 258 (467)
Q Consensus 179 YgG~yvP~lA~~i~~~n~~~~~~~inLkGi~iGng~i~p~~q~~~~~~~~~~~gli~~~~~~~~~~~c~~~~~~~~~~~~ 258 (467)
|||||||.+|++|+++|+....++||||||+||||+++|..|..++.+|+|.||||++++++.+++.|...+....+.+.
T Consensus 174 YaG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~t~~~~~~~~~~~y~~~~glI~~~~~~~i~~~c~~~~~~~~~~~~ 253 (433)
T PLN03016 174 YSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGNYYNVDPSNT 253 (433)
T ss_pred ccceehHHHHHHHHhhcccccCCcccceeeEecCCCcCchhhhhhHHHHHHhcCCCCHHHHHHHHHHhccccccCCCchH
Confidence 99999999999999988765567899999999999999999999999999999999999999999999865433334467
Q ss_pred hHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCCCCcccCCCcccccccccCCCCCCCCCCCcccccccchhcccCcHH
Q 012236 259 DCLNDNQAFSELISGLDQNHILEPRCPFFSPKPRDSNGKRRSLNDNEKSQEFLDPEPALPSIGCRSFGYMLSQNWENDYN 338 (467)
Q Consensus 259 ~C~~~~~~~~~~~~~~~~y~i~~~~C~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~ylN~~~ 338 (467)
.|..+++.+.++.+.+|.|+++.+.|.. . + . ..+.|..+....++.|||+++
T Consensus 254 ~C~~~~~~~~~~~~~~n~yni~~~~~~~---~------------~--------~-----~~~~c~~~~~~~~~~ylN~~~ 305 (433)
T PLN03016 254 QCLKLTEEYHKCTAKINIHHILTPDCDV---T------------N--------V-----TSPDCYYYPYHLIECWANDES 305 (433)
T ss_pred HHHHHHHHHHHHhcCCChhhccCCcccc---c------------c--------c-----CCCcccccchHHHHHHhCCHH
Confidence 8999999888899999999998665632 0 0 0 012464333334678999999
Q ss_pred HHHHcCCCCCCCCCcccccCCccccccCCchHHHHHHhhhcCCeEEEEcCCCccccCchhHHHHHHhcCCCCccCcccee
Q 012236 339 VRKALQIRQGSKGKWQRCNYDLPYTQEIGSSFSFHVSLSTKGYRSLIYSGDHDMVVPFLGTEAWIKSLNYSIIDDWRPWI 418 (467)
Q Consensus 339 Vk~aLhv~~~~~~~w~~cs~~v~~~~d~~~~~~~~~~LL~~~irVLiY~Gd~D~i~n~~Gt~~wi~~L~w~~~~~~~~w~ 418 (467)
||+||||+.....+|..|+..+.+..|..++++.+..++.+++|||||+||.|++||+.||++|+++|+|++.++|++|+
T Consensus 306 V~~aL~v~~~~~~~w~~cn~~v~~~~d~~~~~~~~~~~l~~~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~ 385 (433)
T PLN03016 306 VREALHIEKGSKGKWARCNRTIPYNHDIVSSIPYHMNNSISGYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWM 385 (433)
T ss_pred HHHHhCCCCCCCCCCccCCcccccccccchhhHHHHHHHhcCceEEEEECCccccCCcHhHHHHHHhCCCCCCCCccccc
Confidence 99999998532357999998887777776777777777778999999999999999999999999999999999999999
Q ss_pred eCCeeeeEEEEEecceEEEEEcCCcccccCCChHHHHHHHHHHHcCCCC
Q 012236 419 LHSQVAGYTRTYSNRMTYATVKGGGHIAPEYRPAECYAMFQRWINHDPL 467 (467)
Q Consensus 419 ~~~~~aG~~k~~~~~Ltf~~V~~AGHmvP~DqP~~a~~m~~~fl~~~~l 467 (467)
++++++||+|+|+++|||++|++|||||| |||++|++||++||++++|
T Consensus 386 ~~~~~~G~vk~y~n~ltfv~V~~AGHmVp-~qP~~al~m~~~Fi~~~~l 433 (433)
T PLN03016 386 INNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQRWISGQPL 433 (433)
T ss_pred CCCEeeeEEEEeCCceEEEEEcCCCCCCC-CCHHHHHHHHHHHHcCCCC
Confidence 99999999999965699999999999998 7999999999999999986
No 4
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=100.00 E-value=9.4e-103 Score=803.46 Aligned_cols=403 Identities=37% Similarity=0.657 Sum_probs=326.5
Q ss_pred CCCCCCCCceeEeeeEEecCCCCceEEEEEEecCCCCCCCCEEEEECCCCchHHHhHHHHhhCceEEeccCCCCCCCcce
Q 012236 31 PGFQGPLSFELETGYVGVGESEDAQLFYYFVKSEKNPKEDPLLLWLTGGPGCSAFSALVYEIGPINFNILEYNGSLPTLH 110 (467)
Q Consensus 31 p~~~~~~~~~~~sGy~~~~~~~~~~lfy~f~es~~~~~~~p~~lwlnGGPG~Ss~~g~~~E~GP~~~~~~~~~~~~~~~~ 110 (467)
||+..++++++|||||+|+++.+++||||||||+++++++|||||||||||||||.|+|.|+|||+++.++ + .+++
T Consensus 1 pg~~~~~~~~~~sGyl~~~~~~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~-~---~~l~ 76 (415)
T PF00450_consen 1 PGLDEPVPFKQYSGYLPVNDNENAHLFYWFFESRNDPEDDPLILWLNGGPGCSSMWGLFGENGPFRINPDG-P---YTLE 76 (415)
T ss_dssp TT-SS-SSSEEEEEEEEECTTTTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTS-T---SEEE
T ss_pred CCCCCCCCceEEEEEEecCCCCCcEEEEEEEEeCCCCCCccEEEEecCCceeccccccccccCceEEeecc-c---cccc
Confidence 78888899999999999997778999999999999999999999999999999999999999999999432 1 3699
Q ss_pred eCCCCcccCCceEEEecCCccccccccCCCCcccCchHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHH
Q 012236 111 LNPYSWTKEASILFVDSPVGTGFSYVRTPLASQTGDFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQ 190 (467)
Q Consensus 111 ~n~~sW~~~an~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~ 190 (467)
.||+|||++||||||||||||||||++....+.++++++|+++++||++||.+||+++++||||+||||||||||.+|.+
T Consensus 77 ~n~~sW~~~an~l~iD~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~ 156 (415)
T PF00450_consen 77 DNPYSWNKFANLLFIDQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASY 156 (415)
T ss_dssp E-TT-GGGTSEEEEE--STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHH
T ss_pred ccccccccccceEEEeecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHh
Confidence 99999999999999999999999999887767789999999999999999999999999999999999999999999999
Q ss_pred HHhhcccCCCCceeeeEeEecCCccCcccccccccccccccCCCCHHHHHHHHHHhCCCCcccCCCchhHHHHHHHHHH-
Q 012236 191 ISNENEEGIKPLINLQGYILGNPKTDKIVDKNSQIPFAHGMGLISNELYESLKITCGGDYANIDPSNVDCLNDNQAFSE- 269 (467)
Q Consensus 191 i~~~n~~~~~~~inLkGi~iGng~i~p~~q~~~~~~~~~~~gli~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~~~~- 269 (467)
|+++++.+..++||||||+|||||+||..|..++.+|+|.||+|+++.++.+.+.|.... ........|.+.++.+..
T Consensus 157 i~~~~~~~~~~~inLkGi~IGng~~dp~~~~~s~~~~~~~~gli~~~~~~~~~~~~~~~~-~~~~~~~~c~~~~~~~~~~ 235 (415)
T PF00450_consen 157 ILQQNKKGDQPKINLKGIAIGNGWIDPRIQYNSYADYAYYHGLIDDQQYDDLNKACEACP-QCQKAITECAAALDELSCQ 235 (415)
T ss_dssp HHHHTCC--STTSEEEEEEEESE-SBHHHHHHHHHHHHHHTTSS-HHHHHHHHHHHTTSH-SSSCCHHHHHHHHHHHHHH
T ss_pred hhhccccccccccccccceecCccccccccceeecccccccCcccHHHHHHHHHHhhccc-cccchhhHHHHHHHhhhhh
Confidence 999997665678999999999999999999999999999999999999999999996431 112345789988887765
Q ss_pred -----HhcCCCCCCCCCCCCCCCCCCCCCCCcccCCCcccccccccCCCCCCCCCCCcccccccchhcccCcHHHHHHcC
Q 012236 270 -----LISGLDQNHILEPRCPFFSPKPRDSNGKRRSLNDNEKSQEFLDPEPALPSIGCRSFGYMLSQNWENDYNVRKALQ 344 (467)
Q Consensus 270 -----~~~~~~~y~i~~~~C~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~ylN~~~Vk~aLh 344 (467)
+..++|.|+++.+.|.. .. .. ........| .....+..|||+++||+|||
T Consensus 236 ~~~~~~~~~~n~Ydi~~~~~~~-~~----------~~------------~~~~~~~~~--~~~~~~~~yln~~~Vr~aL~ 290 (415)
T PF00450_consen 236 YAISQCNGGINPYDIRQPCYNP-SR----------SS------------YDNSPSNDP--PDDDYLEAYLNRPDVREALH 290 (415)
T ss_dssp CHHHHHHTTSETTSTTSEETT--SH----------CT------------TCCCCTTTT--TCHHHHHHHHTSHHHHHHTT
T ss_pred cccccccCCcceeeeecccccc-cc----------cc------------ccccccccc--cchhhHHHHhccHHHHHhhC
Confidence 34689999999883321 00 00 000111223 22345678999999999999
Q ss_pred CCCCCCCCcccccCCcc---cccc-CCchHHHHHHhhhcCCeEEEEcCCCccccCchhHHHHHHhcCCCCccCccceee-
Q 012236 345 IRQGSKGKWQRCNYDLP---YTQE-IGSSFSFHVSLSTKGYRSLIYSGDHDMVVPFLGTEAWIKSLNYSIIDDWRPWIL- 419 (467)
Q Consensus 345 v~~~~~~~w~~cs~~v~---~~~d-~~~~~~~~~~LL~~~irVLiY~Gd~D~i~n~~Gt~~wi~~L~w~~~~~~~~w~~- 419 (467)
|+......|+.|+..+. ...| ..++.+.++.||++++|||||+||+|++||+.|+++|+++|+|+++++|++|..
T Consensus 291 v~~~~~~~w~~~~~~V~~~~~~~d~~~~~~~~l~~lL~~~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~ 370 (415)
T PF00450_consen 291 VPVDSNVNWQSCNDAVNFNWLYDDFMPSSIPDLPELLDNGIRVLIYNGDLDLICNFLGTERWIDNLNWSGKDGFRQWPRK 370 (415)
T ss_dssp -STTTSSS--SB-HHHHHHCCTCCC-SBCHHHHHHHHHTT-EEEEEEETT-SSS-HHHHHHHHHCTECTEEEEEEEEEEE
T ss_pred CCcccCCcccccCcccccccccccccccchhhhhhhhhccceeEEeccCCCEEEEeccchhhhhccccCccccccccccc
Confidence 97322578999998762 2334 467889999999999999999999999999999999999999999999999987
Q ss_pred -CCeeeeEEEEEecceEEEEEcCCcccccCCChHHHHHHHHHHHcC
Q 012236 420 -HSQVAGYTRTYSNRMTYATVKGGGHIAPEYRPAECYAMFQRWINH 464 (467)
Q Consensus 420 -~~~~aG~~k~~~~~Ltf~~V~~AGHmvP~DqP~~a~~m~~~fl~~ 464 (467)
+++++||+|++ ++|||++|++||||||+|||++|++||++||+|
T Consensus 371 ~~~~~~G~~k~~-~~ltf~~V~~AGHmvP~dqP~~a~~m~~~fl~g 415 (415)
T PF00450_consen 371 VNGQVAGYVKQY-GNLTFVTVRGAGHMVPQDQPEAALQMFRRFLKG 415 (415)
T ss_dssp TTCSEEEEEEEE-TTEEEEEETT--SSHHHHSHHHHHHHHHHHHCT
T ss_pred ccccccceeEEe-ccEEEEEEcCCcccChhhCHHHHHHHHHHHhcC
Confidence 89999999999 579999999999999999999999999999986
No 5
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=100.00 E-value=5e-96 Score=753.31 Aligned_cols=388 Identities=28% Similarity=0.519 Sum_probs=327.2
Q ss_pred CCCCceeEeeeEEecC-CCCceEEEEEEecCCCCCCCCEEEEECCCCchHHHhHHHHhhCceEEeccCCCCCCCcceeCC
Q 012236 35 GPLSFELETGYVGVGE-SEDAQLFYYFVKSEKNPKEDPLLLWLTGGPGCSAFSALVYEIGPINFNILEYNGSLPTLHLNP 113 (467)
Q Consensus 35 ~~~~~~~~sGy~~~~~-~~~~~lfy~f~es~~~~~~~p~~lwlnGGPG~Ss~~g~~~E~GP~~~~~~~~~~~~~~~~~n~ 113 (467)
.+.++++|||||+|++ ..+.+||||||||+++++++|||||||||||||||.|+|.|+|||+++.++ .++++||
T Consensus 41 ~~~~~~~~sGy~~v~~~~~~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~-----~~~~~n~ 115 (462)
T PTZ00472 41 CDPSVNQWSGYFDIPGNQTDKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETT-----GDIYNNT 115 (462)
T ss_pred cCCCCcceeEEEEeCCCCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCC-----CceeECC
Confidence 5667889999999975 456899999999999999999999999999999999999999999999743 1499999
Q ss_pred CCcccCCceEEEecCCccccccccCCCCcccCchHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHh
Q 012236 114 YSWTKEASILFVDSPVGTGFSYVRTPLASQTGDFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISN 193 (467)
Q Consensus 114 ~sW~~~an~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~ 193 (467)
+||++.+||||||||+||||||++.. ++..+++++|+|+++||+.||++||+++++|+||+||||||+|+|.+|.+|++
T Consensus 116 ~sW~~~~~~l~iDqP~G~G~S~~~~~-~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~ 194 (462)
T PTZ00472 116 YSWNNEAYVIYVDQPAGVGFSYADKA-DYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINM 194 (462)
T ss_pred cccccccCeEEEeCCCCcCcccCCCC-CCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHh
Confidence 99999999999999999999998654 45678899999999999999999999999999999999999999999999999
Q ss_pred hcccCCCCceeeeEeEecCCccCcccccccccccccc-------cCCCCHHHHHHHHH---HhCCCCcc----cCCCchh
Q 012236 194 ENEEGIKPLINLQGYILGNPKTDKIVDKNSQIPFAHG-------MGLISNELYESLKI---TCGGDYAN----IDPSNVD 259 (467)
Q Consensus 194 ~n~~~~~~~inLkGi~iGng~i~p~~q~~~~~~~~~~-------~gli~~~~~~~~~~---~c~~~~~~----~~~~~~~ 259 (467)
+|+.+...+||||||+|||||+||..|..++.+|+|. +|+|++++++++.+ .|...... .......
T Consensus 195 ~n~~~~~~~inLkGi~IGNg~~dp~~q~~~~~~~a~~~~~~~~~~~li~~~~~~~~~~~~~~c~~~~~~c~~~~~~~~~~ 274 (462)
T PTZ00472 195 GNKKGDGLYINLAGLAVGNGLTDPYTQYASYPRLAWDWCKEKLGAPCVSEEAYDEMSSMVPACQKKIKECNSNPDDADSS 274 (462)
T ss_pred hccccCCceeeeEEEEEeccccChhhhcccHHHHhhhcccccCCCCccCHHHHHHHHHHHHHHHHHHHhccccCCCcchH
Confidence 9876666789999999999999999999999999995 58999999888865 34211000 0112334
Q ss_pred HHHHHHHHHHH-----hcCCCCCCCCCCCCCCCCCCCCCCCcccCCCcccccccccCCCCCCCCCCCcccccccchhccc
Q 012236 260 CLNDNQAFSEL-----ISGLDQNHILEPRCPFFSPKPRDSNGKRRSLNDNEKSQEFLDPEPALPSIGCRSFGYMLSQNWE 334 (467)
Q Consensus 260 C~~~~~~~~~~-----~~~~~~y~i~~~~C~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~yl 334 (467)
|..+...+.+. ..++|.|+++.+ |.. +.|.+ ...++.||
T Consensus 275 c~~a~~~c~~~~~~~~~~g~n~Ydi~~~-c~~---------------------------------~~c~~--~~~~~~yL 318 (462)
T PTZ00472 275 CSVARALCNEYIAVYSATGLNNYDIRKP-CIG---------------------------------PLCYN--MDNTIAFM 318 (462)
T ss_pred HHHHHHHHHHHHHHHHhcCCChhheecc-CCC---------------------------------CCccC--HHHHHHHh
Confidence 65443332221 245677777654 421 24532 23467899
Q ss_pred CcHHHHHHcCCCCCCCCCcccccCCc--cccccC-CchHHHHHHhhhcCCeEEEEcCCCccccCchhHHHHHHhcCCCCc
Q 012236 335 NDYNVRKALQIRQGSKGKWQRCNYDL--PYTQEI-GSSFSFHVSLSTKGYRSLIYSGDHDMVVPFLGTEAWIKSLNYSII 411 (467)
Q Consensus 335 N~~~Vk~aLhv~~~~~~~w~~cs~~v--~~~~d~-~~~~~~~~~LL~~~irVLiY~Gd~D~i~n~~Gt~~wi~~L~w~~~ 411 (467)
|+++||+||||+. .+|+.|+..+ .+..|. .++.+.++.||++++|||||+||.|++||+.|+++|+++|+|+++
T Consensus 319 N~~~Vq~AL~v~~---~~w~~c~~~V~~~~~~D~~~~~~~~l~~LL~~gikVLiYnGd~D~icn~~Gt~~wi~~L~w~g~ 395 (462)
T PTZ00472 319 NREDVQSSLGVKP---ATWQSCNMEVNLMFEMDWMKNFNYTVPGLLEDGVRVMIYAGDMDFICNWIGNKAWTLALQWPGN 395 (462)
T ss_pred CCHHHHHHhCCCC---CCceeCCHHHHHHhhhccccchHHHHHHHHhcCceEEEEECCcCeecCcHhHHHHHHhCCCCCc
Confidence 9999999999984 4799999876 355565 456788899999999999999999999999999999999999998
Q ss_pred cCc-----cce-eeCCeeeeEEEEEe----cceEEEEEcCCcccccCCChHHHHHHHHHHHcCCCC
Q 012236 412 DDW-----RPW-ILHSQVAGYTRTYS----NRMTYATVKGGGHIAPEYRPAECYAMFQRWINHDPL 467 (467)
Q Consensus 412 ~~~-----~~w-~~~~~~aG~~k~~~----~~Ltf~~V~~AGHmvP~DqP~~a~~m~~~fl~~~~l 467 (467)
++| ++| .++++++||+|+++ ++|+|++|++||||||+|||+++++|+++|+.+++|
T Consensus 396 ~~f~~a~~~~w~~~~~~v~G~vk~~~~~~~~~l~~~~V~~AGH~vp~d~P~~~~~~i~~fl~~~~~ 461 (462)
T PTZ00472 396 AEFNAAPDVPFSAVDGRWAGLVRSAASNTSSGFSFVQVYNAGHMVPMDQPAVALTMINRFLRNRPL 461 (462)
T ss_pred cchhhcCccccEecCCEeceEEEEEecccCCCeEEEEECCCCccChhhHHHHHHHHHHHHHcCCCC
Confidence 776 689 46899999999994 179999999999999999999999999999999875
No 6
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=100.00 E-value=1.2e-79 Score=606.19 Aligned_cols=319 Identities=54% Similarity=1.027 Sum_probs=274.1
Q ss_pred CCceEEEecCCccccccccCCCCcccCchHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccC
Q 012236 119 EASILFVDSPVGTGFSYVRTPLASQTGDFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEG 198 (467)
Q Consensus 119 ~an~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~ 198 (467)
.|||||||||+||||||+++...+ .+++++|+|++.||+.||++||+|+++||||+||||||||||.+|++|+++|+.+
T Consensus 1 ~aNvLfiDqPvGvGfSy~~~~~~~-~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~ 79 (319)
T PLN02213 1 MANIIFLDQPVGSGFSYSKTPIDK-TGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYIC 79 (319)
T ss_pred CccEEEecCCCCCCCCCCCCCCCc-cccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccc
Confidence 489999999999999998765544 4566677999999999999999999999999999999999999999999988765
Q ss_pred CCCceeeeEeEecCCccCcccccccccccccccCCCCHHHHHHHHHHhCCCCcccCCCchhHHHHHHHHHHHhcCCCCCC
Q 012236 199 IKPLINLQGYILGNPKTDKIVDKNSQIPFAHGMGLISNELYESLKITCGGDYANIDPSNVDCLNDNQAFSELISGLDQNH 278 (467)
Q Consensus 199 ~~~~inLkGi~iGng~i~p~~q~~~~~~~~~~~gli~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~y~ 278 (467)
..++||||||+|||||++|..|..++.+|+|.||+|++++++.+.+.|...+....+....|.++++.+..+.+.+|.|+
T Consensus 80 ~~~~inLkGi~IGNg~t~~~~~~~~~~~~~~~~gli~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~ 159 (319)
T PLN02213 80 CEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGNYYNVDPSNTQCLKLTEEYHKCTAKINIHH 159 (319)
T ss_pred cCCceeeeEEEeCCCCCCccccchhHhhHHHhcCCCCHHHHHHHHHhcCCCccCCCCCcHHHHHHHHHHHHHHhcCCHhh
Confidence 56789999999999999999999999999999999999999999999976543333445689999998888888999999
Q ss_pred CCCCCCCCCCCCCCCCCcccCCCcccccccccCCCCCCCCCCCcccccccchhcccCcHHHHHHcCCCCCCCCCcccccC
Q 012236 279 ILEPRCPFFSPKPRDSNGKRRSLNDNEKSQEFLDPEPALPSIGCRSFGYMLSQNWENDYNVRKALQIRQGSKGKWQRCNY 358 (467)
Q Consensus 279 i~~~~C~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~ylN~~~Vk~aLhv~~~~~~~w~~cs~ 358 (467)
++.+.|.. . + . ..+.|..+....++.|||+++||+||||+.....+|..|+.
T Consensus 160 ~~~~~~~~---~------------~--------~-----~~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~~~~w~~c~~ 211 (319)
T PLN02213 160 ILTPDCDV---T------------N--------V-----TSPDCYYYPYHLIECWANDESVREALHIEKGSKGKWARCNR 211 (319)
T ss_pred cccCcccC---c------------c--------C-----CCCCcccchhHHHHHHhCCHHHHHHhCcCCCCCCCCccCCc
Confidence 88654532 0 0 0 01245433233567899999999999998532257999999
Q ss_pred CccccccCCchHHHHHHhhhcCCeEEEEcCCCccccCchhHHHHHHhcCCCCccCccceeeCCeeeeEEEEEecceEEEE
Q 012236 359 DLPYTQEIGSSFSFHVSLSTKGYRSLIYSGDHDMVVPFLGTEAWIKSLNYSIIDDWRPWILHSQVAGYTRTYSNRMTYAT 438 (467)
Q Consensus 359 ~v~~~~d~~~~~~~~~~LL~~~irVLiY~Gd~D~i~n~~Gt~~wi~~L~w~~~~~~~~w~~~~~~aG~~k~~~~~Ltf~~ 438 (467)
.+.+..|..++++.+..+|.+++|||||+||.|++||+.|+++|+++|+|+++++|+||+++++++||+|+|+++|||++
T Consensus 212 ~v~~~~d~~~~~~~~~~~l~~~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~ 291 (319)
T PLN02213 212 TIPYNHDIVSSIPYHMNNSISGYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFAT 291 (319)
T ss_pred ccccccccccchHHHHHHHhcCceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEE
Confidence 88777777666777667777899999999999999999999999999999999999999999999999999964599999
Q ss_pred EcCCcccccCCChHHHHHHHHHHHcCCCC
Q 012236 439 VKGGGHIAPEYRPAECYAMFQRWINHDPL 467 (467)
Q Consensus 439 V~~AGHmvP~DqP~~a~~m~~~fl~~~~l 467 (467)
|++|||||| |||++|++||++||++++|
T Consensus 292 V~~AGHmV~-~qP~~al~m~~~fi~~~~~ 319 (319)
T PLN02213 292 IKAGGHTAE-YRPNETFIMFQRWISGQPL 319 (319)
T ss_pred EcCCCCCCC-cCHHHHHHHHHHHHcCCCC
Confidence 999999998 7999999999999999886
No 7
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=100.00 E-value=1.3e-69 Score=537.16 Aligned_cols=383 Identities=26% Similarity=0.443 Sum_probs=295.0
Q ss_pred CCceeEeeeEEecCCCCceEEEEEEecCCCCCCCCEEEEECCCCchHHHhHHHHhhCceEEeccCCCCCCCcceeCCCCc
Q 012236 37 LSFELETGYVGVGESEDAQLFYYFVKSEKNPKEDPLLLWLTGGPGCSAFSALVYEIGPINFNILEYNGSLPTLHLNPYSW 116 (467)
Q Consensus 37 ~~~~~~sGy~~~~~~~~~~lfy~f~es~~~~~~~p~~lwlnGGPG~Ss~~g~~~E~GP~~~~~~~~~~~~~~~~~n~~sW 116 (467)
.+.++++||.... ..+|||+||++++|+++|+||||||||||||+.|+|.|+||.+|+.+. + +.--.||+||
T Consensus 72 lpv~~~~g~~d~e----d~~ffy~fe~~ndp~~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~--~--P~~~~NP~SW 143 (498)
T COG2939 72 LPVRDYTGYPDAE----DFFFFYTFESPNDPANRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGT--S--PSYPDNPGSW 143 (498)
T ss_pred cchhhccCCcccc----eeEEEEEecCCCCCCCCceEEEecCCCChHhhhhhhhhcCCeeeeCCC--C--CCCCCCcccc
Confidence 3445555553221 238999999999999999999999999999999999999999999742 1 1111699999
Q ss_pred ccCCceEEEecCCccccccccCCCCcccCchHHHHHHHHHHHHHHHHCCCCCCC--CeEEEeccCCccchHHHHHHHHhh
Q 012236 117 TKEASILFVDSPVGTGFSYVRTPLASQTGDFKQVHQVDQFLRKWLMDHPEFLSN--PFYVGGDSYSGITVPPLVQQISNE 194 (467)
Q Consensus 117 ~~~an~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fL~~F~~~fp~~~~~--~~~i~GESYgG~yvP~lA~~i~~~ 194 (467)
++++||||||||+|||||++. ..+...+-..+.+|++.|++.||+.||++.+. |+||+||||||+|+|.||++|+++
T Consensus 144 ~~~adLvFiDqPvGTGfS~a~-~~e~~~d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~ 222 (498)
T COG2939 144 LDFADLVFIDQPVGTGFSRAL-GDEKKKDFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLED 222 (498)
T ss_pred ccCCceEEEecCcccCccccc-ccccccchhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHh
Confidence 999999999999999999973 23345677789999999999999999999988 999999999999999999999998
Q ss_pred cccCCCCceeeeEeEecCC-ccCccccccccccccccc----CCCCHHHHHHHHHHhCCCCccc-------CCCchhHHH
Q 012236 195 NEEGIKPLINLQGYILGNP-KTDKIVDKNSQIPFAHGM----GLISNELYESLKITCGGDYANI-------DPSNVDCLN 262 (467)
Q Consensus 195 n~~~~~~~inLkGi~iGng-~i~p~~q~~~~~~~~~~~----gli~~~~~~~~~~~c~~~~~~~-------~~~~~~C~~ 262 (467)
+.. .+-.+||++++|||| +|+|..|...|.+++... +..+.+..+++++.|.+++... ......|..
T Consensus 223 ~~~-~~~~~nlssvligng~~t~Pl~~~~~y~~~a~~~~~~~~~l~~e~~~~~~~~~~~d~~~~l~~g~~~~~~~~~c~~ 301 (498)
T COG2939 223 NIA-LNGNVNLSSVLIGNGLWTDPLTQYLTYEPIAAEKGPYDGVLSSEECTKAEKYCAGDYCLALMKGCYDSGSLQPCEN 301 (498)
T ss_pred ccc-cCCceEeeeeeecCCcccChhHHHHHhhhhHhhcCCCCCcCcHHHHHHHHHHhhhhhHhhhccCCCCchhhhHHHH
Confidence 622 233799999999999 999999999999998754 4566777888888886644210 111235776
Q ss_pred HHHHHHHHh------cC---CCCCCCCCCCCCCCCCCCCCCCcccCCCcccccccccCCCCCCCCCCCcccccccchhcc
Q 012236 263 DNQAFSELI------SG---LDQNHILEPRCPFFSPKPRDSNGKRRSLNDNEKSQEFLDPEPALPSIGCRSFGYMLSQNW 333 (467)
Q Consensus 263 ~~~~~~~~~------~~---~~~y~i~~~~C~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~y 333 (467)
+...+.... .+ .|+|++... |.. +.. .-.|+.. ...+.+|
T Consensus 302 ~~~~~~~~~~~~~~r~~~~~~n~y~~r~~-~~d--~g~---------------------------~~~~y~~-~~~~ld~ 350 (498)
T COG2939 302 ASAYLTGLMREYVGRAGGRLLNVYDIREE-CRD--PGL---------------------------GGSCYDT-LSTSLDY 350 (498)
T ss_pred HHHHHHhcchhhhccccccccccccchhh-cCC--CCc---------------------------ccccccc-eeecccc
Confidence 665543321 12 455555444 322 000 0123211 1234578
Q ss_pred cCcHHHHHHcCCCCCCCCCcccccCCc--cc---cccC-CchHHHHHHhhhcCCeEEEEcCCCccccCchhHHHHHHhcC
Q 012236 334 ENDYNVRKALQIRQGSKGKWQRCNYDL--PY---TQEI-GSSFSFHVSLSTKGYRSLIYSGDHDMVVPFLGTEAWIKSLN 407 (467)
Q Consensus 334 lN~~~Vk~aLhv~~~~~~~w~~cs~~v--~~---~~d~-~~~~~~~~~LL~~~irVLiY~Gd~D~i~n~~Gt~~wi~~L~ 407 (467)
+|...++++++... ..|..|+.++ .| ..+. ......+..++.+++.+++|.||.|.+||+.|+++|..+|+
T Consensus 351 ~~~~~~~~~~~~~~---d~~~~c~t~a~~~f~~~~~~~~~~~~~~~~~~lv~~~~~~~~~gd~d~icn~~~~~a~~~~Lk 427 (498)
T COG2939 351 FNFDPEQEVNDPEV---DNISGCTTDAMTDFLTFTGGWAKPSRYLVLNLLVNNVWILLYAGDKDFICNLRGNMALDPKLK 427 (498)
T ss_pred ccccchhccccccc---cchhccchHHHHhhhhhcCCcccccHHHHhhhhhcCCceeeeecCchhHhhhhhhcccCCcce
Confidence 88888888888664 4799999864 34 3333 34555667788899999999999999999999999999999
Q ss_pred CCCccCcc-----ceee--CCeeeeEEEEEecceEEEEEcCCcccccCCChHHHHHHHHHHHcC
Q 012236 408 YSIIDDWR-----PWIL--HSQVAGYTRTYSNRMTYATVKGGGHIAPEYRPAECYAMFQRWINH 464 (467)
Q Consensus 408 w~~~~~~~-----~w~~--~~~~aG~~k~~~~~Ltf~~V~~AGHmvP~DqP~~a~~m~~~fl~~ 464 (467)
|-++..|. +|.. ..+..|-.+++. +++|+.++.||||||+|+|+.+++|++.|+.+
T Consensus 428 w~~~~g~~d~~~~~~~~~~t~e~~~~~~s~~-n~~~~r~y~aGHMvp~d~P~~~~~~~~~~~~~ 490 (498)
T COG2939 428 WLGASGYFDASTPFFWSRLTLEEMGGYKSYR-NLTFLRIYEAGHMVPYDRPESSLEMVNLWING 490 (498)
T ss_pred EeeecchhhhcCCCcccccchhhcccccccC-CceEEEEecCcceeecCChHHHHHHHHHHHhh
Confidence 99988774 3443 456777778884 89999999999999999999999999999986
No 8
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.6e-70 Score=505.42 Aligned_cols=394 Identities=25% Similarity=0.406 Sum_probs=309.7
Q ss_pred eEeeeEEecCCCCceEEEEEEecCCCC-CCCCEEEEECCCCchHHH-hHHHHhhCceEEeccCCCCCCCcceeCCCCccc
Q 012236 41 LETGYVGVGESEDAQLFYYFVKSEKNP-KEDPLLLWLTGGPGCSAF-SALVYEIGPINFNILEYNGSLPTLHLNPYSWTK 118 (467)
Q Consensus 41 ~~sGy~~~~~~~~~~lfy~f~es~~~~-~~~p~~lwlnGGPG~Ss~-~g~~~E~GP~~~~~~~~~~~~~~~~~n~~sW~~ 118 (467)
.-+||+++.. ++++|||++.+..+- ..+|+.|||+||||+||. +|+|.|+||...+ +.+|+++|.+
T Consensus 3 ~~wg~v~vr~--~a~~F~wly~~~~~~ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~----------~~~r~~TWlk 70 (414)
T KOG1283|consen 3 EDWGYVDVRT--GAHMFWWLYYATANVKSERPLALWLQGGPGASSTGFGNFEELGPLDLD----------GSPRDWTWLK 70 (414)
T ss_pred ccccceeeec--CceEEEEEeeeccccccCCCeeEEecCCCCCCCcCccchhhcCCcccC----------CCcCCchhhh
Confidence 3589999975 799999999887544 789999999999999995 5999999999876 5779999999
Q ss_pred CCceEEEecCCccccccccCCCCcccCchHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccC
Q 012236 119 EASILFVDSPVGTGFSYVRTPLASQTGDFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEG 198 (467)
Q Consensus 119 ~an~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~ 198 (467)
.|||||||.|||+||||.+..+.|+++++|+|.|+.+.|+.||..+|||+.+||||+-|||||+..+.+|..+.+..+.+
T Consensus 71 ~adllfvDnPVGaGfSyVdg~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G 150 (414)
T KOG1283|consen 71 DADLLFVDNPVGAGFSYVDGSSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRG 150 (414)
T ss_pred hccEEEecCCCcCceeeecCcccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcC
Confidence 99999999999999999998888999999999999999999999999999999999999999999999999999888755
Q ss_pred CCCceeeeEeEecCCccCcccccccccccccccCCCCHHHHHHHHH---HhCCCCccc-CCCchhHH-HHHHHHHHHhcC
Q 012236 199 IKPLINLQGYILGNPKTDKIVDKNSQIPFAHGMGLISNELYESLKI---TCGGDYANI-DPSNVDCL-NDNQAFSELISG 273 (467)
Q Consensus 199 ~~~~inLkGi~iGng~i~p~~q~~~~~~~~~~~gli~~~~~~~~~~---~c~~~~~~~-~~~~~~C~-~~~~~~~~~~~~ 273 (467)
+.+.|+.||++|++||+|+.-..++.+|+++++++|+...++.+. .|.+....- -...+.|. .+-..+.+..++
T Consensus 151 -~i~~nf~~VaLGDSWISP~D~V~SWGP~L~~~S~LDD~GLds~ns~A~k~~~~v~~g~~~~AT~~Wg~~e~li~~~sn~ 229 (414)
T KOG1283|consen 151 -EIKLNFIGVALGDSWISPEDFVFSWGPLLKHVSRLDDNGLDSSNSGAEKGKGGVDGGKWGGATGGWGGGENLISRESNG 229 (414)
T ss_pred -ceeecceeEEccCcccChhHhhhcchHHHHhhhhhcccCccchhhhHHhhcccccCCccccccccccCcCcceeecccC
Confidence 468999999999999999988899999999999999988766653 332211000 00112232 223334456678
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCcccCCCcccc-cccccCCCCCCCCCCCcccccccchhcccCcHHHHHHcCCCCCCCCC
Q 012236 274 LDQNHILEPRCPFFSPKPRDSNGKRRSLNDNE-KSQEFLDPEPALPSIGCRSFGYMLSQNWENDYNVRKALQIRQGSKGK 352 (467)
Q Consensus 274 ~~~y~i~~~~C~~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~C~~~~~~~~~~ylN~~~Vk~aLhv~~~~~~~ 352 (467)
++.||++.+.-.. +...+ .+...... ..|+...+.. .....+.++++||- -||++|+|.+. -..
T Consensus 230 VdfYNil~~t~~d----~~~~s--s~~~~~~~~~~rrl~~~~~-------~~~~~D~L~~lM~g-~vrkkLgIip~-~~~ 294 (414)
T KOG1283|consen 230 VDFYNILTKTLGD----QYSLS--SRAAMTPEEVMRRLLVRFV-------GDEDRDKLSDLMNG-PVRKKLGIIPG-GVK 294 (414)
T ss_pred cceeeeeccCCCc----chhhh--hhhhcchHHHHHHHHhccC-------cchhHHHHHHHhcc-cccccccccCC-CCc
Confidence 9999998663321 11110 00000000 0000000000 00112346789995 59999999866 367
Q ss_pred cccccCCc--ccccc-CCchHHHHHHhhhcCCeEEEEcCCCccccCchhHHHHHHhcCCCCccCcc--cee---eCCeee
Q 012236 353 WQRCNYDL--PYTQE-IGSSFSFHVSLSTKGYRSLIYSGDHDMVVPFLGTEAWIKSLNYSIIDDWR--PWI---LHSQVA 424 (467)
Q Consensus 353 w~~cs~~v--~~~~d-~~~~~~~~~~LL~~~irVLiY~Gd~D~i~n~~Gt~~wi~~L~w~~~~~~~--~w~---~~~~~a 424 (467)
|...+.++ ....| +.+.++.+.+||++|++|.||||++|.||++.|+++|+.+|+|+..+.|+ +|+ ++-..+
T Consensus 295 wGgqsg~vFt~lq~dFMKPvi~~VdeLL~~Gv~V~VynG~lDlIc~T~G~~AWv~~l~w~~~p~f~~~~r~~~~~s~~l~ 374 (414)
T KOG1283|consen 295 WGGQSGDVFTKLQGDFMKPVISKVDELLNNGVNVTVYNGQLDLICATMGTEAWVEKLEWSAKPSFQVSPRVGITVSRVLE 374 (414)
T ss_pred ccCcCCchHHHhhhhhcccHHHHHHHHHhCCceEEEEecccchhhcccchhhhhhheecCCCCccccceeeeccceeecc
Confidence 98877764 23444 56888999999999999999999999999999999999999999999885 554 345678
Q ss_pred eEEEEEecceEEEEEcCCcccccCCChHHHHHHHHHHHc
Q 012236 425 GYTRTYSNRMTYATVKGGGHIAPEYRPAECYAMFQRWIN 463 (467)
Q Consensus 425 G~~k~~~~~Ltf~~V~~AGHmvP~DqP~~a~~m~~~fl~ 463 (467)
||.|+| +||.|.+|..||||||.|+|+.|.+|++.+.+
T Consensus 375 gy~kty-knl~f~wilraghmvp~Dnp~~a~hmlr~vtk 412 (414)
T KOG1283|consen 375 GYEKTY-KNLSFFWILRAGHMVPADNPAAASHMLRHVTK 412 (414)
T ss_pred hhhhhh-ccceeEEeecccCcccCCCHHHHhhheeeccc
Confidence 999999 57999999999999999999999999987653
No 9
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.07 E-value=2e-08 Score=96.56 Aligned_cols=129 Identities=21% Similarity=0.263 Sum_probs=80.9
Q ss_pred EeeeEEecCCCCceEEEEEEecCCCCCCCCEEEEECCCCchHHHh-HHHHhhCceEEeccCCCCCCCcceeCCCCcccCC
Q 012236 42 ETGYVGVGESEDAQLFYYFVKSEKNPKEDPLLLWLTGGPGCSAFS-ALVYEIGPINFNILEYNGSLPTLHLNPYSWTKEA 120 (467)
Q Consensus 42 ~sGy~~~~~~~~~~lfy~f~es~~~~~~~p~~lwlnGGPG~Ss~~-g~~~E~GP~~~~~~~~~~~~~~~~~n~~sW~~~a 120 (467)
.+++++++ +..+.|.-+. .+...|.||+++||||+++.. ..+.+. +. .+..
T Consensus 3 ~~~~~~~~---~~~~~~~~~~---~~~~~~~vl~~hG~~g~~~~~~~~~~~~----------------l~------~~g~ 54 (288)
T TIGR01250 3 IEGIITVD---GGYHLFTKTG---GEGEKIKLLLLHGGPGMSHEYLENLREL----------------LK------EEGR 54 (288)
T ss_pred ccceecCC---CCeEEEEecc---CCCCCCeEEEEcCCCCccHHHHHHHHHH----------------HH------hcCC
Confidence 34566654 3445554332 223358899999999998754 222211 11 1247
Q ss_pred ceEEEecCCccccccccCCCCcccCchHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCC
Q 012236 121 SILFVDSPVGTGFSYVRTPLASQTGDFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIK 200 (467)
Q Consensus 121 n~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~ 200 (467)
+++-+|.| |.|.|.......-..+.++.++++..++.. +..++++|.|+|+||..+..+|..-
T Consensus 55 ~vi~~d~~-G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~liG~S~Gg~ia~~~a~~~--------- 117 (288)
T TIGR01250 55 EVIMYDQL-GCGYSDQPDDSDELWTIDYFVDELEEVREK-------LGLDKFYLLGHSWGGMLAQEYALKY--------- 117 (288)
T ss_pred EEEEEcCC-CCCCCCCCCcccccccHHHHHHHHHHHHHH-------cCCCcEEEEEeehHHHHHHHHHHhC---------
Confidence 89999988 999886432211013455666766655543 2245699999999999998888642
Q ss_pred CceeeeEeEecCCccC
Q 012236 201 PLINLQGYILGNPKTD 216 (467)
Q Consensus 201 ~~inLkGi~iGng~i~ 216 (467)
+-.++++++.++...
T Consensus 118 -p~~v~~lvl~~~~~~ 132 (288)
T TIGR01250 118 -GQHLKGLIISSMLDS 132 (288)
T ss_pred -ccccceeeEeccccc
Confidence 124789988887654
No 10
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.03 E-value=3.1e-08 Score=97.43 Aligned_cols=140 Identities=19% Similarity=0.269 Sum_probs=88.4
Q ss_pred CCccccCCCCCCCCCceeEeeeEEecCCCC--ceEEEEEEecCCCCCCCCEEEEECCCCchHHHhHHHHhhCceEEeccC
Q 012236 24 RSTVKFLPGFQGPLSFELETGYVGVGESED--AQLFYYFVKSEKNPKEDPLLLWLTGGPGCSAFSALVYEIGPINFNILE 101 (467)
Q Consensus 24 ~~~v~~lp~~~~~~~~~~~sGy~~~~~~~~--~~lfy~f~es~~~~~~~p~~lwlnGGPG~Ss~~g~~~E~GP~~~~~~~ 101 (467)
+.++..||.++ + .-.|+.+....+ .+++|.-. .++ +.|.||.++|.|+.+..+..+. |.
T Consensus 8 ~~~~~~~~~~~----~--~~~~~~~~~~~~~~~~i~y~~~---G~~-~~~~lvliHG~~~~~~~w~~~~---~~------ 68 (302)
T PRK00870 8 DSRFENLPDYP----F--APHYVDVDDGDGGPLRMHYVDE---GPA-DGPPVLLLHGEPSWSYLYRKMI---PI------ 68 (302)
T ss_pred cccccCCcCCC----C--CceeEeecCCCCceEEEEEEec---CCC-CCCEEEEECCCCCchhhHHHHH---HH------
Confidence 34566777652 2 345788864223 35776632 223 4688999999998888875444 11
Q ss_pred CCCCCCcceeCCCCcccCCceEEEecCCccccccccCCCCcccCchHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCc
Q 012236 102 YNGSLPTLHLNPYSWTKEASILFVDSPVGTGFSYVRTPLASQTGDFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSG 181 (467)
Q Consensus 102 ~~~~~~~~~~n~~sW~~~an~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG 181 (467)
+. .+-.+++.+|.| |.|.|...... ...+.++.++++.++|.. +...+++|.|+|+||
T Consensus 69 -------L~------~~gy~vi~~Dl~-G~G~S~~~~~~-~~~~~~~~a~~l~~~l~~-------l~~~~v~lvGhS~Gg 126 (302)
T PRK00870 69 -------LA------AAGHRVIAPDLI-GFGRSDKPTRR-EDYTYARHVEWMRSWFEQ-------LDLTDVTLVCQDWGG 126 (302)
T ss_pred -------HH------hCCCEEEEECCC-CCCCCCCCCCc-ccCCHHHHHHHHHHHHHH-------cCCCCEEEEEEChHH
Confidence 11 123789999988 99988432211 112445566666665543 234589999999999
Q ss_pred cchHHHHHHHHhhcccCCCCceeeeEeEecCCc
Q 012236 182 ITVPPLVQQISNENEEGIKPLINLQGYILGNPK 214 (467)
Q Consensus 182 ~yvP~lA~~i~~~n~~~~~~~inLkGi~iGng~ 214 (467)
..+-.+|.+--+ .++++++.++.
T Consensus 127 ~ia~~~a~~~p~----------~v~~lvl~~~~ 149 (302)
T PRK00870 127 LIGLRLAAEHPD----------RFARLVVANTG 149 (302)
T ss_pred HHHHHHHHhChh----------heeEEEEeCCC
Confidence 988888864211 38888887764
No 11
>PHA02857 monoglyceride lipase; Provisional
Probab=99.02 E-value=5.2e-08 Score=94.37 Aligned_cols=124 Identities=15% Similarity=0.066 Sum_probs=83.0
Q ss_pred CceEEEEEEecCCCCCCCCEEEEECCCCchHHHhHHHHhhCceEEeccCCCCCCCcceeCCCCccc-CCceEEEecCCcc
Q 012236 53 DAQLFYYFVKSEKNPKEDPLLLWLTGGPGCSAFSALVYEIGPINFNILEYNGSLPTLHLNPYSWTK-EASILFVDSPVGT 131 (467)
Q Consensus 53 ~~~lfy~f~es~~~~~~~p~~lwlnGGPG~Ss~~g~~~E~GP~~~~~~~~~~~~~~~~~n~~sW~~-~an~l~iDqPvG~ 131 (467)
+.+|++.+++.. +..+|+||.++|..++|..+-.+.+. +.+ -..++-+|.| |.
T Consensus 10 g~~l~~~~~~~~--~~~~~~v~llHG~~~~~~~~~~~~~~-----------------------l~~~g~~via~D~~-G~ 63 (276)
T PHA02857 10 NDYIYCKYWKPI--TYPKALVFISHGAGEHSGRYEELAEN-----------------------ISSLGILVFSHDHI-GH 63 (276)
T ss_pred CCEEEEEeccCC--CCCCEEEEEeCCCccccchHHHHHHH-----------------------HHhCCCEEEEccCC-CC
Confidence 678999877764 24469999999998877766444311 122 3679999988 99
Q ss_pred ccccccCCCCcccCchHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEeEec
Q 012236 132 GFSYVRTPLASQTGDFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGYILG 211 (467)
Q Consensus 132 GfS~~~~~~~~~~~~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~iG 211 (467)
|.|..... ...+-....+|+.+++..+-+.++ ..+++|.|+|.||.-+..+|.+ .+ -+++|+++.
T Consensus 64 G~S~~~~~--~~~~~~~~~~d~~~~l~~~~~~~~---~~~~~lvG~S~GG~ia~~~a~~---~p-------~~i~~lil~ 128 (276)
T PHA02857 64 GRSNGEKM--MIDDFGVYVRDVVQHVVTIKSTYP---GVPVFLLGHSMGATISILAAYK---NP-------NLFTAMILM 128 (276)
T ss_pred CCCCCccC--CcCCHHHHHHHHHHHHHHHHhhCC---CCCEEEEEcCchHHHHHHHHHh---Cc-------cccceEEEe
Confidence 99854321 112333445667777765444443 5689999999999876666643 11 148999999
Q ss_pred CCccCc
Q 012236 212 NPKTDK 217 (467)
Q Consensus 212 ng~i~p 217 (467)
+|.+++
T Consensus 129 ~p~~~~ 134 (276)
T PHA02857 129 SPLVNA 134 (276)
T ss_pred cccccc
Confidence 987653
No 12
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.00 E-value=6.8e-09 Score=98.28 Aligned_cols=116 Identities=20% Similarity=0.219 Sum_probs=79.0
Q ss_pred EEEEEecCCCCCCCCEEEEECCCCchHHHhHHHHhhCceEEeccCCCCCCCcceeCCCCcccCCceEEEecCCccccccc
Q 012236 57 FYYFVKSEKNPKEDPLLLWLTGGPGCSAFSALVYEIGPINFNILEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGFSYV 136 (467)
Q Consensus 57 fy~f~es~~~~~~~p~~lwlnGGPG~Ss~~g~~~E~GP~~~~~~~~~~~~~~~~~n~~sW~~~an~l~iDqPvG~GfS~~ 136 (467)
+|..+.. ..++.|+||+++|.+|++..+..+.+. + .+..+++-+|.| |.|.|..
T Consensus 2 ~~~~~~~--~~~~~~~iv~lhG~~~~~~~~~~~~~~----------------l-------~~~~~vi~~D~~-G~G~S~~ 55 (257)
T TIGR03611 2 HYELHGP--PDADAPVVVLSSGLGGSGSYWAPQLDV----------------L-------TQRFHVVTYDHR-GTGRSPG 55 (257)
T ss_pred EEEEecC--CCCCCCEEEEEcCCCcchhHHHHHHHH----------------H-------HhccEEEEEcCC-CCCCCCC
Confidence 4555433 224579999999998888766433310 1 234799999988 9999864
Q ss_pred cCCCCcccCchHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEeEecCCccC
Q 012236 137 RTPLASQTGDFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGYILGNPKTD 216 (467)
Q Consensus 137 ~~~~~~~~~~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~iGng~i~ 216 (467)
..... .+.++.++++.+++... ...+++|+|+|+||..+..+|.+.-+ .++++++.+++..
T Consensus 56 ~~~~~--~~~~~~~~~~~~~i~~~-------~~~~~~l~G~S~Gg~~a~~~a~~~~~----------~v~~~i~~~~~~~ 116 (257)
T TIGR03611 56 ELPPG--YSIAHMADDVLQLLDAL-------NIERFHFVGHALGGLIGLQLALRYPE----------RLLSLVLINAWSR 116 (257)
T ss_pred CCccc--CCHHHHHHHHHHHHHHh-------CCCcEEEEEechhHHHHHHHHHHChH----------HhHHheeecCCCC
Confidence 33222 35566777777766532 23579999999999999988874322 3788888887765
Q ss_pred c
Q 012236 217 K 217 (467)
Q Consensus 217 p 217 (467)
+
T Consensus 117 ~ 117 (257)
T TIGR03611 117 P 117 (257)
T ss_pred C
Confidence 4
No 13
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=98.97 E-value=3.8e-08 Score=96.33 Aligned_cols=122 Identities=18% Similarity=0.151 Sum_probs=84.4
Q ss_pred eEEecCCCCceEEEEEEecCCCCCCCCEEEEECCCCchHHHhHHHHhhCceEEeccCCCCCCCcceeCCCCcccCCceEE
Q 012236 45 YVGVGESEDAQLFYYFVKSEKNPKEDPLLLWLTGGPGCSAFSALVYEIGPINFNILEYNGSLPTLHLNPYSWTKEASILF 124 (467)
Q Consensus 45 y~~~~~~~~~~lfy~f~es~~~~~~~p~~lwlnGGPG~Ss~~g~~~E~GP~~~~~~~~~~~~~~~~~n~~sW~~~an~l~ 124 (467)
|++++ +.+++|.-. .+ ..|.||+|+|.+++|.++..+.+. + .+..+++.
T Consensus 12 ~~~~~---~~~i~y~~~----G~-~~~~vlllHG~~~~~~~w~~~~~~----------------L-------~~~~~vi~ 60 (294)
T PLN02824 12 TWRWK---GYNIRYQRA----GT-SGPALVLVHGFGGNADHWRKNTPV----------------L-------AKSHRVYA 60 (294)
T ss_pred eEEEc---CeEEEEEEc----CC-CCCeEEEECCCCCChhHHHHHHHH----------------H-------HhCCeEEE
Confidence 56664 466776432 11 237899999999999988655521 2 23458999
Q ss_pred EecCCccccccccCCCC----cccCchHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCC
Q 012236 125 VDSPVGTGFSYVRTPLA----SQTGDFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIK 200 (467)
Q Consensus 125 iDqPvG~GfS~~~~~~~----~~~~~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~ 200 (467)
+|.| |.|.|....... ...+.++.|+++.++|... ...+++|.|+|.||..+-.+|.+--+
T Consensus 61 ~Dlp-G~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l-------~~~~~~lvGhS~Gg~va~~~a~~~p~------- 125 (294)
T PLN02824 61 IDLL-GYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDV-------VGDPAFVICNSVGGVVGLQAAVDAPE------- 125 (294)
T ss_pred EcCC-CCCCCCCCccccccccccCCHHHHHHHHHHHHHHh-------cCCCeEEEEeCHHHHHHHHHHHhChh-------
Confidence 9999 999986533211 1235567777777777643 23689999999999999888765322
Q ss_pred CceeeeEeEecCCcc
Q 012236 201 PLINLQGYILGNPKT 215 (467)
Q Consensus 201 ~~inLkGi~iGng~i 215 (467)
.++++++.|+..
T Consensus 126 ---~v~~lili~~~~ 137 (294)
T PLN02824 126 ---LVRGVMLINISL 137 (294)
T ss_pred ---heeEEEEECCCc
Confidence 489999998764
No 14
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=98.96 E-value=4.2e-08 Score=94.47 Aligned_cols=123 Identities=18% Similarity=0.090 Sum_probs=81.4
Q ss_pred eEEecCCCCceEEEEEEecCCCCCCCCEEEEECCCCchHHHhHHHHhhCceEEeccCCCCCCCcceeCCCCcccCCceEE
Q 012236 45 YVGVGESEDAQLFYYFVKSEKNPKEDPLLLWLTGGPGCSAFSALVYEIGPINFNILEYNGSLPTLHLNPYSWTKEASILF 124 (467)
Q Consensus 45 y~~~~~~~~~~lfy~f~es~~~~~~~p~~lwlnGGPG~Ss~~g~~~E~GP~~~~~~~~~~~~~~~~~n~~sW~~~an~l~ 124 (467)
|++++ +.+++|- + ..+.+.|+||+++|.+|.+..+..+.+. +. +..+++.
T Consensus 10 ~~~~~---~~~~~~~--~--~g~~~~~~vv~~hG~~~~~~~~~~~~~~----------------l~-------~~~~vi~ 59 (278)
T TIGR03056 10 RVTVG---PFHWHVQ--D--MGPTAGPLLLLLHGTGASTHSWRDLMPP----------------LA-------RSFRVVA 59 (278)
T ss_pred eeeEC---CEEEEEE--e--cCCCCCCeEEEEcCCCCCHHHHHHHHHH----------------Hh-------hCcEEEe
Confidence 44554 4555543 2 2334468999999999888776433311 21 2368999
Q ss_pred EecCCccccccccCCCCcccCchHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCcee
Q 012236 125 VDSPVGTGFSYVRTPLASQTGDFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLIN 204 (467)
Q Consensus 125 iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~in 204 (467)
+|.| |.|.|...... ..+.+..|+++.++++. +...+++|.|+|+||..+..+|.+. +-.
T Consensus 60 ~D~~-G~G~S~~~~~~--~~~~~~~~~~l~~~i~~-------~~~~~~~lvG~S~Gg~~a~~~a~~~----------p~~ 119 (278)
T TIGR03056 60 PDLP-GHGFTRAPFRF--RFTLPSMAEDLSALCAA-------EGLSPDGVIGHSAGAAIALRLALDG----------PVT 119 (278)
T ss_pred ecCC-CCCCCCCcccc--CCCHHHHHHHHHHHHHH-------cCCCCceEEEECccHHHHHHHHHhC----------Ccc
Confidence 9988 99988643321 23556777777777753 2235789999999998877777542 124
Q ss_pred eeEeEecCCccCc
Q 012236 205 LQGYILGNPKTDK 217 (467)
Q Consensus 205 LkGi~iGng~i~p 217 (467)
++++++.++..++
T Consensus 120 v~~~v~~~~~~~~ 132 (278)
T TIGR03056 120 PRMVVGINAALMP 132 (278)
T ss_pred cceEEEEcCcccc
Confidence 7899998887654
No 15
>PRK03204 haloalkane dehalogenase; Provisional
Probab=98.88 E-value=1.6e-07 Score=91.67 Aligned_cols=122 Identities=16% Similarity=0.196 Sum_probs=75.3
Q ss_pred EeeeEEecCCCCceEEEEEEecCCCCCCCCEEEEECCCCchHHHhHHHHhhCceEEeccCCCCCCCcceeCCCCcccCCc
Q 012236 42 ETGYVGVGESEDAQLFYYFVKSEKNPKEDPLLLWLTGGPGCSAFSALVYEIGPINFNILEYNGSLPTLHLNPYSWTKEAS 121 (467)
Q Consensus 42 ~sGy~~~~~~~~~~lfy~f~es~~~~~~~p~~lwlnGGPG~Ss~~g~~~E~GP~~~~~~~~~~~~~~~~~n~~sW~~~an 121 (467)
.+.+++++ +..++|-- .. +.|.||.|+|.|..+..+-.+. |. + .+..+
T Consensus 15 ~~~~~~~~---~~~i~y~~---~G---~~~~iv~lHG~~~~~~~~~~~~---~~-------------l-------~~~~~ 62 (286)
T PRK03204 15 ESRWFDSS---RGRIHYID---EG---TGPPILLCHGNPTWSFLYRDII---VA-------------L-------RDRFR 62 (286)
T ss_pred cceEEEcC---CcEEEEEE---CC---CCCEEEEECCCCccHHHHHHHH---HH-------------H-------hCCcE
Confidence 35577775 45676542 11 2478999999987666554333 10 1 23479
Q ss_pred eEEEecCCccccccccCCCCcccCchHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCC
Q 012236 122 ILFVDSPVGTGFSYVRTPLASQTGDFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKP 201 (467)
Q Consensus 122 ~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~ 201 (467)
++-+|.| |.|.|-... ....+.++.++++.++++. . ...+++|.|+|+||.-+-.+|.+ .
T Consensus 63 vi~~D~~-G~G~S~~~~--~~~~~~~~~~~~~~~~~~~----~---~~~~~~lvG~S~Gg~va~~~a~~---~------- 122 (286)
T PRK03204 63 CVAPDYL-GFGLSERPS--GFGYQIDEHARVIGEFVDH----L---GLDRYLSMGQDWGGPISMAVAVE---R------- 122 (286)
T ss_pred EEEECCC-CCCCCCCCC--ccccCHHHHHHHHHHHHHH----h---CCCCEEEEEECccHHHHHHHHHh---C-------
Confidence 9999988 888885322 1122344555555555543 2 23579999999999765555432 1
Q ss_pred ceeeeEeEecCCcc
Q 012236 202 LINLQGYILGNPKT 215 (467)
Q Consensus 202 ~inLkGi~iGng~i 215 (467)
.-.++++++.++..
T Consensus 123 p~~v~~lvl~~~~~ 136 (286)
T PRK03204 123 ADRVRGVVLGNTWF 136 (286)
T ss_pred hhheeEEEEECccc
Confidence 12589999887753
No 16
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=98.85 E-value=2.2e-07 Score=93.47 Aligned_cols=126 Identities=18% Similarity=0.175 Sum_probs=81.7
Q ss_pred CceEEEEEEecCCCCCCCCEEEEECCCCchHHHh-HHHHhhCceEEeccCCCCCCCcceeCCCCcc-cCCceEEEecCCc
Q 012236 53 DAQLFYYFVKSEKNPKEDPLLLWLTGGPGCSAFS-ALVYEIGPINFNILEYNGSLPTLHLNPYSWT-KEASILFVDSPVG 130 (467)
Q Consensus 53 ~~~lfy~f~es~~~~~~~p~~lwlnGGPG~Ss~~-g~~~E~GP~~~~~~~~~~~~~~~~~n~~sW~-~~an~l~iDqPvG 130 (467)
+..+|+..+...+ .+.+|+||+++|..+.++.. -.+. +. +. +-.+++-+|.| |
T Consensus 71 g~~l~~~~~~p~~-~~~~~~iv~lHG~~~~~~~~~~~~~---~~--------------------l~~~g~~v~~~D~~-G 125 (349)
T PLN02385 71 GVEIFSKSWLPEN-SRPKAAVCFCHGYGDTCTFFFEGIA---RK--------------------IASSGYGVFAMDYP-G 125 (349)
T ss_pred CCEEEEEEEecCC-CCCCeEEEEECCCCCccchHHHHHH---HH--------------------HHhCCCEEEEecCC-C
Confidence 6788886554322 23569999999987665432 1111 10 11 23689999999 9
Q ss_pred cccccccCCCCcccCchHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEeEe
Q 012236 131 TGFSYVRTPLASQTGDFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGYIL 210 (467)
Q Consensus 131 ~GfS~~~~~~~~~~~~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~i 210 (467)
.|.|-... .+..+-++.++|+.++++.. ...+++...+++|.|+|+||..+-.+|.+ .. -.++|+++
T Consensus 126 ~G~S~~~~--~~~~~~~~~~~dv~~~l~~l-~~~~~~~~~~~~LvGhSmGG~val~~a~~---~p-------~~v~glVL 192 (349)
T PLN02385 126 FGLSEGLH--GYIPSFDDLVDDVIEHYSKI-KGNPEFRGLPSFLFGQSMGGAVALKVHLK---QP-------NAWDGAIL 192 (349)
T ss_pred CCCCCCCC--CCcCCHHHHHHHHHHHHHHH-HhccccCCCCEEEEEeccchHHHHHHHHh---Cc-------chhhheeE
Confidence 99885432 22235567788888887653 33345556689999999999877666543 11 14799999
Q ss_pred cCCccC
Q 012236 211 GNPKTD 216 (467)
Q Consensus 211 Gng~i~ 216 (467)
.+|...
T Consensus 193 i~p~~~ 198 (349)
T PLN02385 193 VAPMCK 198 (349)
T ss_pred eccccc
Confidence 887653
No 17
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=98.84 E-value=2.3e-07 Score=92.44 Aligned_cols=138 Identities=14% Similarity=0.078 Sum_probs=85.5
Q ss_pred eEeeeEEecCCCCceEEEEEEecCCCCCCCCEEEEECCCCchHHHhHHHHhhCceEEeccCCCCCCCcceeCCCCccc-C
Q 012236 41 LETGYVGVGESEDAQLFYYFVKSEKNPKEDPLLLWLTGGPGCSAFSALVYEIGPINFNILEYNGSLPTLHLNPYSWTK-E 119 (467)
Q Consensus 41 ~~sGy~~~~~~~~~~lfy~f~es~~~~~~~p~~lwlnGGPG~Ss~~g~~~E~GP~~~~~~~~~~~~~~~~~n~~sW~~-~ 119 (467)
...+++...+ +..++|+.+.........|+||+++|..+.++ + .+.+. ...+.+ -
T Consensus 32 ~~~~~~~~~d--g~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~-~-~~~~~--------------------~~~L~~~G 87 (330)
T PLN02298 32 GSKSFFTSPR--GLSLFTRSWLPSSSSPPRALIFMVHGYGNDIS-W-TFQST--------------------AIFLAQMG 87 (330)
T ss_pred cccceEEcCC--CCEEEEEEEecCCCCCCceEEEEEcCCCCCcc-e-ehhHH--------------------HHHHHhCC
Confidence 3456666543 67898854432222234689999999954332 1 01100 001222 3
Q ss_pred CceEEEecCCccccccccCCCCcccCchHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCC
Q 012236 120 ASILFVDSPVGTGFSYVRTPLASQTGDFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGI 199 (467)
Q Consensus 120 an~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~ 199 (467)
.+++-+|+| |.|.|... .....+.+..++|+..+++..-. ..++...+++|.|+|.||..+-.+|.+ ..
T Consensus 88 y~V~~~D~r-GhG~S~~~--~~~~~~~~~~~~D~~~~i~~l~~-~~~~~~~~i~l~GhSmGG~ia~~~a~~---~p---- 156 (330)
T PLN02298 88 FACFALDLE-GHGRSEGL--RAYVPNVDLVVEDCLSFFNSVKQ-REEFQGLPRFLYGESMGGAICLLIHLA---NP---- 156 (330)
T ss_pred CEEEEecCC-CCCCCCCc--cccCCCHHHHHHHHHHHHHHHHh-cccCCCCCEEEEEecchhHHHHHHHhc---Cc----
Confidence 799999999 99988532 22223556778888888875433 223345589999999999877665542 11
Q ss_pred CCceeeeEeEecCCccC
Q 012236 200 KPLINLQGYILGNPKTD 216 (467)
Q Consensus 200 ~~~inLkGi~iGng~i~ 216 (467)
-.++|+++.+++..
T Consensus 157 ---~~v~~lvl~~~~~~ 170 (330)
T PLN02298 157 ---EGFDGAVLVAPMCK 170 (330)
T ss_pred ---ccceeEEEeccccc
Confidence 14899999988764
No 18
>PRK10673 acyl-CoA esterase; Provisional
Probab=98.79 E-value=1.4e-07 Score=89.88 Aligned_cols=104 Identities=15% Similarity=0.131 Sum_probs=75.8
Q ss_pred CCCCCCCEEEEECCCCchHHHhHHHHhhCceEEeccCCCCCCCcceeCCCCcccCCceEEEecCCccccccccCCCCccc
Q 012236 65 KNPKEDPLLLWLTGGPGCSAFSALVYEIGPINFNILEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGFSYVRTPLASQT 144 (467)
Q Consensus 65 ~~~~~~p~~lwlnGGPG~Ss~~g~~~E~GP~~~~~~~~~~~~~~~~~n~~sW~~~an~l~iDqPvG~GfS~~~~~~~~~~ 144 (467)
+++.+.|.||+++|.+|.+..+.-+.+. + .+..+++.+|+| |.|.|.... . .
T Consensus 11 ~~~~~~~~iv~lhG~~~~~~~~~~~~~~----------------l-------~~~~~vi~~D~~-G~G~s~~~~--~--~ 62 (255)
T PRK10673 11 QNPHNNSPIVLVHGLFGSLDNLGVLARD----------------L-------VNDHDIIQVDMR-NHGLSPRDP--V--M 62 (255)
T ss_pred CCCCCCCCEEEECCCCCchhHHHHHHHH----------------H-------hhCCeEEEECCC-CCCCCCCCC--C--C
Confidence 4556789999999999998776544321 1 234699999999 888886432 2 3
Q ss_pred CchHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEeEecCC
Q 012236 145 GDFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGYILGNP 213 (467)
Q Consensus 145 ~~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~iGng 213 (467)
+.++.++|+.++|..+ ...+++|.|+|.||..+..+|.+--+ .++++++.++
T Consensus 63 ~~~~~~~d~~~~l~~l-------~~~~~~lvGhS~Gg~va~~~a~~~~~----------~v~~lvli~~ 114 (255)
T PRK10673 63 NYPAMAQDLLDTLDAL-------QIEKATFIGHSMGGKAVMALTALAPD----------RIDKLVAIDI 114 (255)
T ss_pred CHHHHHHHHHHHHHHc-------CCCceEEEEECHHHHHHHHHHHhCHh----------hcceEEEEec
Confidence 5567888888888753 23579999999999999988865322 3788887763
No 19
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=98.75 E-value=7.9e-07 Score=86.09 Aligned_cols=60 Identities=13% Similarity=0.142 Sum_probs=50.1
Q ss_pred CCeEEEEcCCCccccCchhHHHHHHhcCCCCccCccceeeCCeeeeEEEEEecceEEEEEcCCcccccCCChHHHHHHHH
Q 012236 380 GYRSLIYSGDHDMVVPFLGTEAWIKSLNYSIIDDWRPWILHSQVAGYTRTYSNRMTYATVKGGGHIAPEYRPAECYAMFQ 459 (467)
Q Consensus 380 ~irVLiY~Gd~D~i~n~~Gt~~wi~~L~w~~~~~~~~w~~~~~~aG~~k~~~~~Ltf~~V~~AGHmvP~DqP~~a~~m~~ 459 (467)
.++||+..|..|.+++..-.+.+.+.+ .+..++.|.+|||+++.++|+...+++.
T Consensus 223 ~~Pvlli~G~~D~~v~~~~~~~~~~~~-------------------------~~~~~~~i~~agH~~~~e~p~~~~~~i~ 277 (282)
T TIGR03343 223 KAKTLVTWGRDDRFVPLDHGLKLLWNM-------------------------PDAQLHVFSRCGHWAQWEHADAFNRLVI 277 (282)
T ss_pred CCCEEEEEccCCCcCCchhHHHHHHhC-------------------------CCCEEEEeCCCCcCCcccCHHHHHHHHH
Confidence 689999999999999976666554442 2466788999999999999999999999
Q ss_pred HHHcC
Q 012236 460 RWINH 464 (467)
Q Consensus 460 ~fl~~ 464 (467)
+|+..
T Consensus 278 ~fl~~ 282 (282)
T TIGR03343 278 DFLRN 282 (282)
T ss_pred HHhhC
Confidence 99863
No 20
>PRK03592 haloalkane dehalogenase; Provisional
Probab=98.74 E-value=1.3e-06 Score=85.53 Aligned_cols=120 Identities=14% Similarity=0.095 Sum_probs=82.4
Q ss_pred eEEecCCCCceEEEEEEecCCCCCCCCEEEEECCCCchHHHhHHHHhhCceEEeccCCCCCCCcceeCCCCcccCCceEE
Q 012236 45 YVGVGESEDAQLFYYFVKSEKNPKEDPLLLWLTGGPGCSAFSALVYEIGPINFNILEYNGSLPTLHLNPYSWTKEASILF 124 (467)
Q Consensus 45 y~~~~~~~~~~lfy~f~es~~~~~~~p~~lwlnGGPG~Ss~~g~~~E~GP~~~~~~~~~~~~~~~~~n~~sW~~~an~l~ 124 (467)
+++++ +.+++|.-. . +.|.||+++|.|+.+..+-.+.+. + .+...++-
T Consensus 11 ~~~~~---g~~i~y~~~--G----~g~~vvllHG~~~~~~~w~~~~~~----------------L-------~~~~~via 58 (295)
T PRK03592 11 RVEVL---GSRMAYIET--G----EGDPIVFLHGNPTSSYLWRNIIPH----------------L-------AGLGRCLA 58 (295)
T ss_pred EEEEC---CEEEEEEEe--C----CCCEEEEECCCCCCHHHHHHHHHH----------------H-------hhCCEEEE
Confidence 35553 466777532 1 347899999999999888544411 1 22348999
Q ss_pred EecCCccccccccCCCCcccCchHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCcee
Q 012236 125 VDSPVGTGFSYVRTPLASQTGDFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLIN 204 (467)
Q Consensus 125 iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~in 204 (467)
+|.| |.|.|..... . .+.+..|+++..++... ...+++|.|+|.||..+-.+|.+--+ .
T Consensus 59 ~D~~-G~G~S~~~~~-~--~~~~~~a~dl~~ll~~l-------~~~~~~lvGhS~Gg~ia~~~a~~~p~----------~ 117 (295)
T PRK03592 59 PDLI-GMGASDKPDI-D--YTFADHARYLDAWFDAL-------GLDDVVLVGHDWGSALGFDWAARHPD----------R 117 (295)
T ss_pred EcCC-CCCCCCCCCC-C--CCHHHHHHHHHHHHHHh-------CCCCeEEEEECHHHHHHHHHHHhChh----------h
Confidence 9999 9999854321 2 35566777777777542 23689999999999888777765322 3
Q ss_pred eeEeEecCCccCc
Q 012236 205 LQGYILGNPKTDK 217 (467)
Q Consensus 205 LkGi~iGng~i~p 217 (467)
++++++.|+.+.|
T Consensus 118 v~~lil~~~~~~~ 130 (295)
T PRK03592 118 VRGIAFMEAIVRP 130 (295)
T ss_pred eeEEEEECCCCCC
Confidence 8999999986554
No 21
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=98.74 E-value=1.1e-06 Score=88.88 Aligned_cols=119 Identities=16% Similarity=0.117 Sum_probs=74.7
Q ss_pred eEEEEEEecCCCCCCCCEEEEECCCCchHHHhHHHHhhCceEEeccCCCCCCCcceeCCCCcccCCceEEEecCCccccc
Q 012236 55 QLFYYFVKSEKNPKEDPLLLWLTGGPGCSAFSALVYEIGPINFNILEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGFS 134 (467)
Q Consensus 55 ~lfy~f~es~~~~~~~p~~lwlnGGPG~Ss~~g~~~E~GP~~~~~~~~~~~~~~~~~n~~sW~~~an~l~iDqPvG~GfS 134 (467)
+++|.-..+.....+.|.||.|+|.++.+..+..+.+. + .+...++-+|.| |.|.|
T Consensus 73 ~i~Y~~~G~g~~~~~gp~lvllHG~~~~~~~w~~~~~~----------------L-------~~~~~via~Dl~-G~G~S 128 (360)
T PLN02679 73 SINYLVKGSPEVTSSGPPVLLVHGFGASIPHWRRNIGV----------------L-------AKNYTVYAIDLL-GFGAS 128 (360)
T ss_pred eEEEEEecCcccCCCCCeEEEECCCCCCHHHHHHHHHH----------------H-------hcCCEEEEECCC-CCCCC
Confidence 67765332211111347889999999988887544421 1 224689999999 88888
Q ss_pred cccCCCCcccCchHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEeEecCCc
Q 012236 135 YVRTPLASQTGDFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGYILGNPK 214 (467)
Q Consensus 135 ~~~~~~~~~~~~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~iGng~ 214 (467)
..... ...+.++.|+++.++|... ...+++|.|+|.||..+-.+|.. ... -.++|+++.|+.
T Consensus 129 ~~~~~--~~~~~~~~a~~l~~~l~~l-------~~~~~~lvGhS~Gg~ia~~~a~~--~~P-------~rV~~LVLi~~~ 190 (360)
T PLN02679 129 DKPPG--FSYTMETWAELILDFLEEV-------VQKPTVLIGNSVGSLACVIAASE--STR-------DLVRGLVLLNCA 190 (360)
T ss_pred CCCCC--ccccHHHHHHHHHHHHHHh-------cCCCeEEEEECHHHHHHHHHHHh--cCh-------hhcCEEEEECCc
Confidence 53222 1235566777777777642 23589999999999655444432 111 137899988865
Q ss_pred c
Q 012236 215 T 215 (467)
Q Consensus 215 i 215 (467)
.
T Consensus 191 ~ 191 (360)
T PLN02679 191 G 191 (360)
T ss_pred c
Confidence 3
No 22
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=98.71 E-value=7e-07 Score=90.57 Aligned_cols=118 Identities=19% Similarity=0.176 Sum_probs=76.9
Q ss_pred CceEEEEEEecCCCCCCCCEEEEECCCCchHHHhHHHHhhCceEEeccCCCCCCCcceeCCCCcccCCceEEEecCCccc
Q 012236 53 DAQLFYYFVKSEKNPKEDPLLLWLTGGPGCSAFSALVYEIGPINFNILEYNGSLPTLHLNPYSWTKEASILFVDSPVGTG 132 (467)
Q Consensus 53 ~~~lfy~f~es~~~~~~~p~~lwlnGGPG~Ss~~g~~~E~GP~~~~~~~~~~~~~~~~~n~~sW~~~an~l~iDqPvG~G 132 (467)
+-++||. +. .+.+.|.||.++|.|+.+..+-.+.+. + .+..+++-+|.| |.|
T Consensus 114 ~~~~~y~--~~--G~~~~~~ivllHG~~~~~~~w~~~~~~----------------L-------~~~~~Via~Dlp-G~G 165 (383)
T PLN03084 114 LFRWFCV--ES--GSNNNPPVLLIHGFPSQAYSYRKVLPV----------------L-------SKNYHAIAFDWL-GFG 165 (383)
T ss_pred ceEEEEE--ec--CCCCCCeEEEECCCCCCHHHHHHHHHH----------------H-------hcCCEEEEECCC-CCC
Confidence 4556654 22 234568999999999888776544311 1 224789999999 999
Q ss_pred cccccCCC-CcccCchHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEeEec
Q 012236 133 FSYVRTPL-ASQTGDFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGYILG 211 (467)
Q Consensus 133 fS~~~~~~-~~~~~~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~iG 211 (467)
.|...... ....+.++.++++.++|+.. ...+++|.|+|+||..+-.+|.+ . +-.++++++.
T Consensus 166 ~S~~p~~~~~~~ys~~~~a~~l~~~i~~l-------~~~~~~LvG~s~GG~ia~~~a~~----~------P~~v~~lILi 228 (383)
T PLN03084 166 FSDKPQPGYGFNYTLDEYVSSLESLIDEL-------KSDKVSLVVQGYFSPPVVKYASA----H------PDKIKKLILL 228 (383)
T ss_pred CCCCCcccccccCCHHHHHHHHHHHHHHh-------CCCCceEEEECHHHHHHHHHHHh----C------hHhhcEEEEE
Confidence 98643221 11235566777777777653 23479999999999654444432 1 1148999999
Q ss_pred CCcc
Q 012236 212 NPKT 215 (467)
Q Consensus 212 ng~i 215 (467)
|+..
T Consensus 229 ~~~~ 232 (383)
T PLN03084 229 NPPL 232 (383)
T ss_pred CCCC
Confidence 9754
No 23
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=98.70 E-value=8.7e-07 Score=85.90 Aligned_cols=117 Identities=14% Similarity=0.068 Sum_probs=78.8
Q ss_pred CceEEEEEEecCCCCCCCCEEEEECCCCchHHHhHHHHhhCceEEeccCCCCCCCcceeCCCCcccCCceEEEecCCccc
Q 012236 53 DAQLFYYFVKSEKNPKEDPLLLWLTGGPGCSAFSALVYEIGPINFNILEYNGSLPTLHLNPYSWTKEASILFVDSPVGTG 132 (467)
Q Consensus 53 ~~~lfy~f~es~~~~~~~p~~lwlnGGPG~Ss~~g~~~E~GP~~~~~~~~~~~~~~~~~n~~sW~~~an~l~iDqPvG~G 132 (467)
+..+.||..+. . ...|.||+++|-++.+..+..+.+- + .+..+++.+|.| |.|
T Consensus 11 ~~~~~~~~~~~--~-~~~~plvllHG~~~~~~~w~~~~~~----------------L-------~~~~~vi~~Dl~-G~G 63 (276)
T TIGR02240 11 GQSIRTAVRPG--K-EGLTPLLIFNGIGANLELVFPFIEA----------------L-------DPDLEVIAFDVP-GVG 63 (276)
T ss_pred CcEEEEEEecC--C-CCCCcEEEEeCCCcchHHHHHHHHH----------------h-------ccCceEEEECCC-CCC
Confidence 46788886542 2 2346789999987777766433310 1 234799999999 999
Q ss_pred cccccCCCCcccCchHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEeEecC
Q 012236 133 FSYVRTPLASQTGDFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGYILGN 212 (467)
Q Consensus 133 fS~~~~~~~~~~~~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~iGn 212 (467)
.|-... . ..+.+..++++.++|... .-.+++|.|+|+||..+-.+|.+--+ .++++++.|
T Consensus 64 ~S~~~~-~--~~~~~~~~~~~~~~i~~l-------~~~~~~LvG~S~GG~va~~~a~~~p~----------~v~~lvl~~ 123 (276)
T TIGR02240 64 GSSTPR-H--PYRFPGLAKLAARMLDYL-------DYGQVNAIGVSWGGALAQQFAHDYPE----------RCKKLILAA 123 (276)
T ss_pred CCCCCC-C--cCcHHHHHHHHHHHHHHh-------CcCceEEEEECHHHHHHHHHHHHCHH----------HhhheEEec
Confidence 885322 1 234456666666666542 23579999999999988877764222 389999999
Q ss_pred CccC
Q 012236 213 PKTD 216 (467)
Q Consensus 213 g~i~ 216 (467)
+...
T Consensus 124 ~~~~ 127 (276)
T TIGR02240 124 TAAG 127 (276)
T ss_pred cCCc
Confidence 8764
No 24
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=98.58 E-value=3.2e-06 Score=79.15 Aligned_cols=59 Identities=20% Similarity=0.317 Sum_probs=49.1
Q ss_pred CCeEEEEcCCCccccCchhHHHHHHhcCCCCccCccceeeCCeeeeEEEEEecceEEEEEcCCcccccCCChHHHHHHHH
Q 012236 380 GYRSLIYSGDHDMVVPFLGTEAWIKSLNYSIIDDWRPWILHSQVAGYTRTYSNRMTYATVKGGGHIAPEYRPAECYAMFQ 459 (467)
Q Consensus 380 ~irVLiY~Gd~D~i~n~~Gt~~wi~~L~w~~~~~~~~w~~~~~~aG~~k~~~~~Ltf~~V~~AGHmvP~DqP~~a~~m~~ 459 (467)
.++|++.+|+.|.+++....+.+.+.+ .+.++.++.++||+++.++|+...+.++
T Consensus 193 ~~Pvlii~g~~D~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~gH~~~~~~p~~~~~~i~ 247 (251)
T TIGR02427 193 AVPTLCIAGDQDGSTPPELVREIADLV-------------------------PGARFAEIRGAGHIPCVEQPEAFNAALR 247 (251)
T ss_pred CCCeEEEEeccCCcCChHHHHHHHHhC-------------------------CCceEEEECCCCCcccccChHHHHHHHH
Confidence 689999999999999987666554432 1356788899999999999999999999
Q ss_pred HHHc
Q 012236 460 RWIN 463 (467)
Q Consensus 460 ~fl~ 463 (467)
.|+.
T Consensus 248 ~fl~ 251 (251)
T TIGR02427 248 DFLR 251 (251)
T ss_pred HHhC
Confidence 9974
No 25
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=98.57 E-value=6.6e-06 Score=79.41 Aligned_cols=138 Identities=18% Similarity=0.204 Sum_probs=90.5
Q ss_pred ceeEeeeEEecCCCCceEEEEEEecCCCCCCCCEEEEECCCCchHHHhHHHHhhCceEEeccCCCCCCCcceeCCCCccc
Q 012236 39 FELETGYVGVGESEDAQLFYYFVKSEKNPKEDPLLLWLTGGPGCSAFSALVYEIGPINFNILEYNGSLPTLHLNPYSWTK 118 (467)
Q Consensus 39 ~~~~sGy~~~~~~~~~~lfy~f~es~~~~~~~p~~lwlnGGPG~Ss~~g~~~E~GP~~~~~~~~~~~~~~~~~n~~sW~~ 118 (467)
....-+|++++ + +++++.|. .+++.|+|+.|+|=|=.+=.+=.-.+ .+. ..
T Consensus 20 ~~~~hk~~~~~---g--I~~h~~e~--g~~~gP~illlHGfPe~wyswr~q~~----------------~la------~~ 70 (322)
T KOG4178|consen 20 SAISHKFVTYK---G--IRLHYVEG--GPGDGPIVLLLHGFPESWYSWRHQIP----------------GLA------SR 70 (322)
T ss_pred hhcceeeEEEc---c--EEEEEEee--cCCCCCEEEEEccCCccchhhhhhhh----------------hhh------hc
Confidence 44567788875 2 77887776 67889999999999987766521110 011 11
Q ss_pred CCceEEEecCCccccccccCCCCcccCchHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccC
Q 012236 119 EASILFVDSPVGTGFSYVRTPLASQTGDFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEG 198 (467)
Q Consensus 119 ~an~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~ 198 (467)
-..++.+|.. |.|+|-..... ...+-...+.|+..+|.. +.....++.|++||+.-+=.+|..--++.+
T Consensus 71 ~~rviA~Dlr-GyG~Sd~P~~~-~~Yt~~~l~~di~~lld~-------Lg~~k~~lvgHDwGaivaw~la~~~Perv~-- 139 (322)
T KOG4178|consen 71 GYRVIAPDLR-GYGFSDAPPHI-SEYTIDELVGDIVALLDH-------LGLKKAFLVGHDWGAIVAWRLALFYPERVD-- 139 (322)
T ss_pred ceEEEecCCC-CCCCCCCCCCc-ceeeHHHHHHHHHHHHHH-------hccceeEEEeccchhHHHHHHHHhChhhcc--
Confidence 1678999998 99988765431 123555677777777753 335689999999999988888876555332
Q ss_pred CCCceeeeEeEecCCccCccc
Q 012236 199 IKPLINLQGYILGNPKTDKIV 219 (467)
Q Consensus 199 ~~~~inLkGi~iGng~i~p~~ 219 (467)
-.+++++... ||..+|..
T Consensus 140 --~lv~~nv~~~-~p~~~~~~ 157 (322)
T KOG4178|consen 140 --GLVTLNVPFP-NPKLKPLD 157 (322)
T ss_pred --eEEEecCCCC-Ccccchhh
Confidence 1344444444 66666653
No 26
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.56 E-value=1.7e-06 Score=83.86 Aligned_cols=132 Identities=14% Similarity=0.176 Sum_probs=83.8
Q ss_pred eeeEEecCCCCceEEEEEEecCCCCCCCCEEEEECCCCchHHHhHHHHhhCceEEeccCCCCCCCcceeCCCCcccCCce
Q 012236 43 TGYVGVGESEDAQLFYYFVKSEKNPKEDPLLLWLTGGPGCSAFSALVYEIGPINFNILEYNGSLPTLHLNPYSWTKEASI 122 (467)
Q Consensus 43 sGy~~~~~~~~~~lfy~f~es~~~~~~~p~~lwlnGGPG~Ss~~g~~~E~GP~~~~~~~~~~~~~~~~~n~~sW~~~an~ 122 (467)
+=|+.+.. +... |.++-....++.+-++.++|= |++++. |. +|=.+..+.-||
T Consensus 67 ~~~v~i~~--~~~i--w~~~~~~~~~~~~plVliHGy-GAg~g~--f~--------------------~Nf~~La~~~~v 119 (365)
T KOG4409|consen 67 KKYVRIPN--GIEI--WTITVSNESANKTPLVLIHGY-GAGLGL--FF--------------------RNFDDLAKIRNV 119 (365)
T ss_pred eeeeecCC--Ccee--EEEeecccccCCCcEEEEecc-chhHHH--HH--------------------HhhhhhhhcCce
Confidence 44566642 2233 333333333566667778864 555433 22 122222447899
Q ss_pred EEEecCCccccccccCCCCcccCchHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCc
Q 012236 123 LFVDSPVGTGFSYVRTPLASQTGDFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPL 202 (467)
Q Consensus 123 l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~ 202 (467)
-.||+| |-|.|.-.. +..+-+.+-+.|.+-+.+|....- + .+.+|.|+|+||...-..|.+--+
T Consensus 120 yaiDll-G~G~SSRP~---F~~d~~~~e~~fvesiE~WR~~~~-L--~KmilvGHSfGGYLaa~YAlKyPe--------- 183 (365)
T KOG4409|consen 120 YAIDLL-GFGRSSRPK---FSIDPTTAEKEFVESIEQWRKKMG-L--EKMILVGHSFGGYLAAKYALKYPE--------- 183 (365)
T ss_pred EEeccc-CCCCCCCCC---CCCCcccchHHHHHHHHHHHHHcC-C--cceeEeeccchHHHHHHHHHhChH---------
Confidence 999999 888885433 333334444589999999988763 3 479999999999877666654333
Q ss_pred eeeeEeEecCCccCcc
Q 012236 203 INLQGYILGNPKTDKI 218 (467)
Q Consensus 203 inLkGi~iGng~i~p~ 218 (467)
.++-++|.+||--|+
T Consensus 184 -rV~kLiLvsP~Gf~~ 198 (365)
T KOG4409|consen 184 -RVEKLILVSPWGFPE 198 (365)
T ss_pred -hhceEEEeccccccc
Confidence 378899999998776
No 27
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=98.56 E-value=4.6e-06 Score=85.08 Aligned_cols=127 Identities=19% Similarity=0.120 Sum_probs=84.6
Q ss_pred CceEEEEEEecCCCCCCCCEEEEECCCCchHHHhHHHHhhCceEEeccCCCCCCCcceeCCCCcccCCceEEEecCCccc
Q 012236 53 DAQLFYYFVKSEKNPKEDPLLLWLTGGPGCSAFSALVYEIGPINFNILEYNGSLPTLHLNPYSWTKEASILFVDSPVGTG 132 (467)
Q Consensus 53 ~~~lfy~f~es~~~~~~~p~~lwlnGGPG~Ss~~g~~~E~GP~~~~~~~~~~~~~~~~~n~~sW~~~an~l~iDqPvG~G 132 (467)
+..+|++.+.... .+.+|+||+++|.++.+..+-.+.+. +. .+-.+++-+|.| |.|
T Consensus 120 ~~~l~~~~~~p~~-~~~~~~Vl~lHG~~~~~~~~~~~a~~----------------L~------~~Gy~V~~~D~r-GhG 175 (395)
T PLN02652 120 RNALFCRSWAPAA-GEMRGILIIIHGLNEHSGRYLHFAKQ----------------LT------SCGFGVYAMDWI-GHG 175 (395)
T ss_pred CCEEEEEEecCCC-CCCceEEEEECCchHHHHHHHHHHHH----------------HH------HCCCEEEEeCCC-CCC
Confidence 4678887776542 33468999999998776654333311 10 123589999988 888
Q ss_pred cccccCCCCcccCchHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEeEecC
Q 012236 133 FSYVRTPLASQTGDFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGYILGN 212 (467)
Q Consensus 133 fS~~~~~~~~~~~~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~iGn 212 (467)
.|-.. ..+..+.+..++|+..+++..-..+| ..+++|+|+|.||..+..+|. ..+ ..-.++|+++.+
T Consensus 176 ~S~~~--~~~~~~~~~~~~Dl~~~l~~l~~~~~---~~~i~lvGhSmGG~ial~~a~----~p~----~~~~v~glVL~s 242 (395)
T PLN02652 176 GSDGL--HGYVPSLDYVVEDTEAFLEKIRSENP---GVPCFLFGHSTGGAVVLKAAS----YPS----IEDKLEGIVLTS 242 (395)
T ss_pred CCCCC--CCCCcCHHHHHHHHHHHHHHHHHhCC---CCCEEEEEECHHHHHHHHHHh----ccC----cccccceEEEEC
Confidence 88543 22334556677888888887665565 358999999999987765543 111 012489999988
Q ss_pred CccC
Q 012236 213 PKTD 216 (467)
Q Consensus 213 g~i~ 216 (467)
|++.
T Consensus 243 P~l~ 246 (395)
T PLN02652 243 PALR 246 (395)
T ss_pred cccc
Confidence 8764
No 28
>PLN02578 hydrolase
Probab=98.56 E-value=4.9e-06 Score=83.88 Aligned_cols=112 Identities=19% Similarity=0.223 Sum_probs=74.3
Q ss_pred CceEEEEEEecCCCCCCCCEEEEECCCCchHHHhHHHHhhCceEEeccCCCCCCCcceeCCCCcccCCceEEEecCCccc
Q 012236 53 DAQLFYYFVKSEKNPKEDPLLLWLTGGPGCSAFSALVYEIGPINFNILEYNGSLPTLHLNPYSWTKEASILFVDSPVGTG 132 (467)
Q Consensus 53 ~~~lfy~f~es~~~~~~~p~~lwlnGGPG~Ss~~g~~~E~GP~~~~~~~~~~~~~~~~~n~~sW~~~an~l~iDqPvG~G 132 (467)
+.+++|.-.. +.|-||.++|-++.+..+.... |. + .+..+++.+|.| |.|
T Consensus 75 ~~~i~Y~~~g------~g~~vvliHG~~~~~~~w~~~~---~~-------------l-------~~~~~v~~~D~~-G~G 124 (354)
T PLN02578 75 GHKIHYVVQG------EGLPIVLIHGFGASAFHWRYNI---PE-------------L-------AKKYKVYALDLL-GFG 124 (354)
T ss_pred CEEEEEEEcC------CCCeEEEECCCCCCHHHHHHHH---HH-------------H-------hcCCEEEEECCC-CCC
Confidence 4677776322 2355789998877665553332 10 1 234789999999 888
Q ss_pred cccccCCCCcccCchHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEeEecC
Q 012236 133 FSYVRTPLASQTGDFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGYILGN 212 (467)
Q Consensus 133 fS~~~~~~~~~~~~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~iGn 212 (467)
.|-... . ..+.+..++++.+|++... ..+++|.|+|+||..+..+|.+--+ .++++++.|
T Consensus 125 ~S~~~~-~--~~~~~~~a~~l~~~i~~~~-------~~~~~lvG~S~Gg~ia~~~A~~~p~----------~v~~lvLv~ 184 (354)
T PLN02578 125 WSDKAL-I--EYDAMVWRDQVADFVKEVV-------KEPAVLVGNSLGGFTALSTAVGYPE----------LVAGVALLN 184 (354)
T ss_pred CCCCcc-c--ccCHHHHHHHHHHHHHHhc-------cCCeEEEEECHHHHHHHHHHHhChH----------hcceEEEEC
Confidence 875332 1 2244556777777776532 4689999999999988888875422 488999887
Q ss_pred Cc
Q 012236 213 PK 214 (467)
Q Consensus 213 g~ 214 (467)
+.
T Consensus 185 ~~ 186 (354)
T PLN02578 185 SA 186 (354)
T ss_pred CC
Confidence 64
No 29
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=98.52 E-value=2.6e-06 Score=85.98 Aligned_cols=114 Identities=16% Similarity=0.105 Sum_probs=74.3
Q ss_pred CceEEEEEEecCCCCCCCCEEEEECCCCchHHHhHHHHhhCceEEeccCCCCCCCcceeCCCCcccCCceEEEecCCccc
Q 012236 53 DAQLFYYFVKSEKNPKEDPLLLWLTGGPGCSAFSALVYEIGPINFNILEYNGSLPTLHLNPYSWTKEASILFVDSPVGTG 132 (467)
Q Consensus 53 ~~~lfy~f~es~~~~~~~p~~lwlnGGPG~Ss~~g~~~E~GP~~~~~~~~~~~~~~~~~n~~sW~~~an~l~iDqPvG~G 132 (467)
+..++|. +..+.+.|.||+++|.+|++..+..+.+. +. +..+++-+|.| |.|
T Consensus 118 ~~~i~~~----~~g~~~~~~vl~~HG~~~~~~~~~~~~~~----------------l~-------~~~~v~~~d~~-g~G 169 (371)
T PRK14875 118 GRTVRYL----RLGEGDGTPVVLIHGFGGDLNNWLFNHAA----------------LA-------AGRPVIALDLP-GHG 169 (371)
T ss_pred CcEEEEe----cccCCCCCeEEEECCCCCccchHHHHHHH----------------Hh-------cCCEEEEEcCC-CCC
Confidence 3456554 22234468899999999988877555421 11 12689999988 999
Q ss_pred cccccCCCCcccCchHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEeEecC
Q 012236 133 FSYVRTPLASQTGDFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGYILGN 212 (467)
Q Consensus 133 fS~~~~~~~~~~~~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~iGn 212 (467)
.|-.... ..+.++.++++..+++. +...+++|.|+|+||..+..+|.+-. -.++++++.+
T Consensus 170 ~s~~~~~---~~~~~~~~~~~~~~~~~-------~~~~~~~lvG~S~Gg~~a~~~a~~~~----------~~v~~lv~~~ 229 (371)
T PRK14875 170 ASSKAVG---AGSLDELAAAVLAFLDA-------LGIERAHLVGHSMGGAVALRLAARAP----------QRVASLTLIA 229 (371)
T ss_pred CCCCCCC---CCCHHHHHHHHHHHHHh-------cCCccEEEEeechHHHHHHHHHHhCc----------hheeEEEEEC
Confidence 8843211 23455666666555543 23357999999999999988886521 1377877776
Q ss_pred Cc
Q 012236 213 PK 214 (467)
Q Consensus 213 g~ 214 (467)
+.
T Consensus 230 ~~ 231 (371)
T PRK14875 230 PA 231 (371)
T ss_pred cC
Confidence 54
No 30
>PRK10749 lysophospholipase L2; Provisional
Probab=98.51 E-value=1.9e-05 Score=78.70 Aligned_cols=125 Identities=15% Similarity=0.098 Sum_probs=80.7
Q ss_pred CceEEEEEEecCCCCCCCCEEEEECCCCchHHHhHHHHhhCceEEeccCCCCCCCcceeCCCCcccCCceEEEecCCccc
Q 012236 53 DAQLFYYFVKSEKNPKEDPLLLWLTGGPGCSAFSALVYEIGPINFNILEYNGSLPTLHLNPYSWTKEASILFVDSPVGTG 132 (467)
Q Consensus 53 ~~~lfy~f~es~~~~~~~p~~lwlnGGPG~Ss~~g~~~E~GP~~~~~~~~~~~~~~~~~n~~sW~~~an~l~iDqPvG~G 132 (467)
+.+++|+.+... +.+|+||.++|-.+.+....-+. +... .+-.+++-+|.| |.|
T Consensus 40 g~~l~~~~~~~~---~~~~~vll~HG~~~~~~~y~~~~---~~l~-------------------~~g~~v~~~D~~-G~G 93 (330)
T PRK10749 40 DIPIRFVRFRAP---HHDRVVVICPGRIESYVKYAELA---YDLF-------------------HLGYDVLIIDHR-GQG 93 (330)
T ss_pred CCEEEEEEccCC---CCCcEEEEECCccchHHHHHHHH---HHHH-------------------HCCCeEEEEcCC-CCC
Confidence 567999876542 34689999999866554442222 1100 123689999988 999
Q ss_pred cccccCCC---CcccCchHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEeE
Q 012236 133 FSYVRTPL---ASQTGDFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGYI 209 (467)
Q Consensus 133 fS~~~~~~---~~~~~~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~ 209 (467)
.|...... ....+-+..++|+..+++.....++ ..++++.|+|.||..+-.+|.+ .. -.++|++
T Consensus 94 ~S~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~---~~~~~l~GhSmGG~ia~~~a~~---~p-------~~v~~lv 160 (330)
T PRK10749 94 RSGRLLDDPHRGHVERFNDYVDDLAAFWQQEIQPGP---YRKRYALAHSMGGAILTLFLQR---HP-------GVFDAIA 160 (330)
T ss_pred CCCCCCCCCCcCccccHHHHHHHHHHHHHHHHhcCC---CCCeEEEEEcHHHHHHHHHHHh---CC-------CCcceEE
Confidence 88532111 1112445677788888776554433 5689999999999877666653 11 1379999
Q ss_pred ecCCccC
Q 012236 210 LGNPKTD 216 (467)
Q Consensus 210 iGng~i~ 216 (467)
+.+|...
T Consensus 161 l~~p~~~ 167 (330)
T PRK10749 161 LCAPMFG 167 (330)
T ss_pred EECchhc
Confidence 9988754
No 31
>PRK10349 carboxylesterase BioH; Provisional
Probab=98.50 E-value=1.5e-06 Score=83.18 Aligned_cols=96 Identities=19% Similarity=0.076 Sum_probs=65.7
Q ss_pred CCEEEEECCCCchHHHhHHHHhhCceEEeccCCCCCCCcceeCCCCcccCCceEEEecCCccccccccCCCCcccCchHH
Q 012236 70 DPLLLWLTGGPGCSAFSALVYEIGPINFNILEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGFSYVRTPLASQTGDFKQ 149 (467)
Q Consensus 70 ~p~~lwlnGGPG~Ss~~g~~~E~GP~~~~~~~~~~~~~~~~~n~~sW~~~an~l~iDqPvG~GfS~~~~~~~~~~~~~~~ 149 (467)
.|.||.++|.++++..+-.+.+. + .+..+++.+|.| |.|.|.... . .+.++.
T Consensus 13 ~~~ivllHG~~~~~~~w~~~~~~----------------L-------~~~~~vi~~Dl~-G~G~S~~~~--~--~~~~~~ 64 (256)
T PRK10349 13 NVHLVLLHGWGLNAEVWRCIDEE----------------L-------SSHFTLHLVDLP-GFGRSRGFG--A--LSLADM 64 (256)
T ss_pred CCeEEEECCCCCChhHHHHHHHH----------------H-------hcCCEEEEecCC-CCCCCCCCC--C--CCHHHH
Confidence 35699999999888887543311 2 345899999999 999885321 1 244455
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEeEecCCc
Q 012236 150 VHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGYILGNPK 214 (467)
Q Consensus 150 a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~iGng~ 214 (467)
++++.+ +...++++.|+|+||.-+..+|.+-- -.++++++.|+.
T Consensus 65 ~~~l~~-----------~~~~~~~lvGhS~Gg~ia~~~a~~~p----------~~v~~lili~~~ 108 (256)
T PRK10349 65 AEAVLQ-----------QAPDKAIWLGWSLGGLVASQIALTHP----------ERVQALVTVASS 108 (256)
T ss_pred HHHHHh-----------cCCCCeEEEEECHHHHHHHHHHHhCh----------HhhheEEEecCc
Confidence 554432 12357999999999998888875321 247888887763
No 32
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=98.42 E-value=6.2e-06 Score=84.56 Aligned_cols=119 Identities=16% Similarity=0.177 Sum_probs=74.2
Q ss_pred eEEEEEEecCCCCCCCCEEEEECCCCchHHHhHHHHhhCceEEeccCCCCCCCcceeCCCCcccCCceEEEecCCccccc
Q 012236 55 QLFYYFVKSEKNPKEDPLLLWLTGGPGCSAFSALVYEIGPINFNILEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGFS 134 (467)
Q Consensus 55 ~lfy~f~es~~~~~~~p~~lwlnGGPG~Ss~~g~~~E~GP~~~~~~~~~~~~~~~~~n~~sW~~~an~l~iDqPvG~GfS 134 (467)
.+....++.+ .+.|.||.++|.++.+..+.-.. . .+ .+..+++-+|.| |.|-|
T Consensus 93 ~~~~~~~~~~---~~~p~vvllHG~~~~~~~~~~~~-------~---------~L-------~~~~~vi~~D~r-G~G~S 145 (402)
T PLN02894 93 FINTVTFDSK---EDAPTLVMVHGYGASQGFFFRNF-------D---------AL-------ASRFRVIAIDQL-GWGGS 145 (402)
T ss_pred eEEEEEecCC---CCCCEEEEECCCCcchhHHHHHH-------H---------HH-------HhCCEEEEECCC-CCCCC
Confidence 4555444422 45699999999988766553221 0 02 224689999999 88887
Q ss_pred cccCCCCcccCchHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEeEecCCc
Q 012236 135 YVRTPLASQTGDFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGYILGNPK 214 (467)
Q Consensus 135 ~~~~~~~~~~~~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~iGng~ 214 (467)
.... .. ..+.+++.+.+.+.+..|.+.. ...+++|.|+|+||..+-.+|.+- +-.++++++.++.
T Consensus 146 ~~~~-~~-~~~~~~~~~~~~~~i~~~~~~l---~~~~~~lvGhS~GG~la~~~a~~~----------p~~v~~lvl~~p~ 210 (402)
T PLN02894 146 SRPD-FT-CKSTEETEAWFIDSFEEWRKAK---NLSNFILLGHSFGGYVAAKYALKH----------PEHVQHLILVGPA 210 (402)
T ss_pred CCCC-cc-cccHHHHHHHHHHHHHHHHHHc---CCCCeEEEEECHHHHHHHHHHHhC----------chhhcEEEEECCc
Confidence 4321 11 1223344445566666665543 234899999999998877776542 1247888888876
Q ss_pred c
Q 012236 215 T 215 (467)
Q Consensus 215 i 215 (467)
.
T Consensus 211 ~ 211 (402)
T PLN02894 211 G 211 (402)
T ss_pred c
Confidence 4
No 33
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=98.39 E-value=1.3e-05 Score=74.73 Aligned_cols=58 Identities=14% Similarity=-0.030 Sum_probs=48.1
Q ss_pred CCeEEEEcCCCccccCchhHHHHHHhcCCCCccCccceeeCCeeeeEEEEEecceEEEEEcCCcccccCCChHHHHHHHH
Q 012236 380 GYRSLIYSGDHDMVVPFLGTEAWIKSLNYSIIDDWRPWILHSQVAGYTRTYSNRMTYATVKGGGHIAPEYRPAECYAMFQ 459 (467)
Q Consensus 380 ~irVLiY~Gd~D~i~n~~Gt~~wi~~L~w~~~~~~~~w~~~~~~aG~~k~~~~~Ltf~~V~~AGHmvP~DqP~~a~~m~~ 459 (467)
..+||+.+|..|.+++....+.+.+.+ .+-++..+.+|||+++.++|+...+.+.
T Consensus 188 ~~Pvlii~g~~D~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~gH~~~~e~p~~~~~~i~ 242 (245)
T TIGR01738 188 SVPFLRLYGYLDGLVPAKVVPYLDKLA-------------------------PHSELYIFAKAAHAPFLSHAEAFCALLV 242 (245)
T ss_pred CCCEEEEeecCCcccCHHHHHHHHHhC-------------------------CCCeEEEeCCCCCCccccCHHHHHHHHH
Confidence 589999999999999987766554332 1345678899999999999999999999
Q ss_pred HHH
Q 012236 460 RWI 462 (467)
Q Consensus 460 ~fl 462 (467)
.||
T Consensus 243 ~fi 245 (245)
T TIGR01738 243 AFK 245 (245)
T ss_pred hhC
Confidence 986
No 34
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=98.32 E-value=1e-05 Score=75.42 Aligned_cols=105 Identities=24% Similarity=0.260 Sum_probs=67.5
Q ss_pred CCEEEEECCCCchHHHhHHHHhhCceEEeccCCCCCCCcceeCCCCcccCCceEEEecCCccccccccCCCCcccCchHH
Q 012236 70 DPLLLWLTGGPGCSAFSALVYEIGPINFNILEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGFSYVRTPLASQTGDFKQ 149 (467)
Q Consensus 70 ~p~~lwlnGGPG~Ss~~g~~~E~GP~~~~~~~~~~~~~~~~~n~~sW~~~an~l~iDqPvG~GfS~~~~~~~~~~~~~~~ 149 (467)
.|+||.++|.+|.+..+-.+. +. +. +..+++-+|.| |.|.|..... ....+.++.
T Consensus 1 ~~~vv~~hG~~~~~~~~~~~~---~~-------------L~-------~~~~v~~~d~~-g~G~s~~~~~-~~~~~~~~~ 55 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADWQALI---EL-------------LG-------PHFRCLAIDLP-GHGSSQSPDE-IERYDFEEA 55 (251)
T ss_pred CCEEEEEcCCCCchhhHHHHH---HH-------------hc-------ccCeEEEEcCC-CCCCCCCCCc-cChhhHHHH
Confidence 378999999998888764332 11 21 23689999988 8888854221 112234445
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEeEecCCcc
Q 012236 150 VHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGYILGNPKT 215 (467)
Q Consensus 150 a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~iGng~i 215 (467)
++++ +..+.+.+ ..++++|.|+|+||..+..+|.+.- -.++++++.++..
T Consensus 56 ~~~~---~~~~~~~~---~~~~~~l~G~S~Gg~ia~~~a~~~~----------~~v~~lil~~~~~ 105 (251)
T TIGR03695 56 AQDI---LATLLDQL---GIEPFFLVGYSMGGRIALYYALQYP----------ERVQGLILESGSP 105 (251)
T ss_pred HHHH---HHHHHHHc---CCCeEEEEEeccHHHHHHHHHHhCc----------hheeeeEEecCCC
Confidence 5552 22333333 3568999999999998888887532 1478888877653
No 35
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=98.31 E-value=6e-05 Score=78.45 Aligned_cols=128 Identities=17% Similarity=0.160 Sum_probs=79.1
Q ss_pred eeEEecCCCCceEEEEEEecCCCCCCCCEEEEECCCCchHHHhHH-HHhhCceEEeccCCCCCCCcceeCCCCcccCCce
Q 012236 44 GYVGVGESEDAQLFYYFVKSEKNPKEDPLLLWLTGGPGCSAFSAL-VYEIGPINFNILEYNGSLPTLHLNPYSWTKEASI 122 (467)
Q Consensus 44 Gy~~~~~~~~~~lfy~f~es~~~~~~~p~~lwlnGGPG~Ss~~g~-~~E~GP~~~~~~~~~~~~~~~~~n~~sW~~~an~ 122 (467)
-|++.+ +..|||+....... ...|.||+++|.+|.+.++.. +.+ . +.. .+.+...+
T Consensus 179 ~~~~~~---~~~l~~~~~gp~~~-~~k~~VVLlHG~~~s~~~W~~~~~~---~-------------L~~---~~~~~yrV 235 (481)
T PLN03087 179 SWLSSS---NESLFVHVQQPKDN-KAKEDVLFIHGFISSSAFWTETLFP---N-------------FSD---AAKSTYRL 235 (481)
T ss_pred eeEeeC---CeEEEEEEecCCCC-CCCCeEEEECCCCccHHHHHHHHHH---H-------------HHH---HhhCCCEE
Confidence 455554 36788886654322 234789999999999887642 110 0 110 12345789
Q ss_pred EEEecCCccccccccCCCCcccCchHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCc
Q 012236 123 LFVDSPVGTGFSYVRTPLASQTGDFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPL 202 (467)
Q Consensus 123 l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~ 202 (467)
+.+|.| |.|-|-...... .+.++.++++. +.+.+.. ...+++|.|+|.||..+-.+|.+--+
T Consensus 236 ia~Dl~-G~G~S~~p~~~~--ytl~~~a~~l~---~~ll~~l---g~~k~~LVGhSmGG~iAl~~A~~~Pe--------- 297 (481)
T PLN03087 236 FAVDLL-GFGRSPKPADSL--YTLREHLEMIE---RSVLERY---KVKSFHIVAHSLGCILALALAVKHPG--------- 297 (481)
T ss_pred EEECCC-CCCCCcCCCCCc--CCHHHHHHHHH---HHHHHHc---CCCCEEEEEECHHHHHHHHHHHhChH---------
Confidence 999999 888874322111 24444454442 1333332 34589999999999998888865222
Q ss_pred eeeeEeEecCC
Q 012236 203 INLQGYILGNP 213 (467)
Q Consensus 203 inLkGi~iGng 213 (467)
.++++++.++
T Consensus 298 -~V~~LVLi~~ 307 (481)
T PLN03087 298 -AVKSLTLLAP 307 (481)
T ss_pred -hccEEEEECC
Confidence 3788888876
No 36
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=98.28 E-value=0.0001 Score=73.58 Aligned_cols=151 Identities=15% Similarity=0.061 Sum_probs=86.7
Q ss_pred CceEEEEEEecCCCCCCCCEEEEECCCCchHHHhHHHHh--------hCceEEeccCCCCCCCcceeC---CCCc-ccCC
Q 012236 53 DAQLFYYFVKSEKNPKEDPLLLWLTGGPGCSAFSALVYE--------IGPINFNILEYNGSLPTLHLN---PYSW-TKEA 120 (467)
Q Consensus 53 ~~~lfy~f~es~~~~~~~p~~lwlnGGPG~Ss~~g~~~E--------~GP~~~~~~~~~~~~~~~~~n---~~sW-~~~a 120 (467)
+..|+++.++.. ..+.+|+.++|==+-+ .. -|++ -+|+.|+.+.. ...+ -... .+-.
T Consensus 7 g~~l~~~~~~~~---~~kg~v~i~HG~~eh~-~~-~~~~~~~~~~~~~~~~~~~~~ry------~~y~~~~~~~l~~~G~ 75 (332)
T TIGR01607 7 GLLLKTYSWIVK---NAIGIIVLIHGLKSHL-RL-QFLKINAKIVNNDRAVLIDTDNY------YIYKDSWIENFNKNGY 75 (332)
T ss_pred CCeEEEeeeecc---CCeEEEEEECCCchhh-hh-hhhhcCcccCCCCeeEEEcCCcc------eEeeHHHHHHHHHCCC
Confidence 567888766543 2357999999853333 21 1221 12333322100 0001 0122 2347
Q ss_pred ceEEEecCCccccccccCC-CCcccCchHHHHHHHHHHHHHHHHC----------------CCCC-CCCeEEEeccCCcc
Q 012236 121 SILFVDSPVGTGFSYVRTP-LASQTGDFKQVHQVDQFLRKWLMDH----------------PEFL-SNPFYVGGDSYSGI 182 (467)
Q Consensus 121 n~l~iDqPvG~GfS~~~~~-~~~~~~~~~~a~~~~~fL~~F~~~f----------------p~~~-~~~~~i~GESYgG~ 182 (467)
+++-+|.| |.|.|.+... .....+-++.++|+..+++..-+.. .++. +.|+||.|+|.||.
T Consensus 76 ~V~~~D~r-GHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~ 154 (332)
T TIGR01607 76 SVYGLDLQ-GHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGN 154 (332)
T ss_pred cEEEeccc-ccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccH
Confidence 89999988 9999875432 1222355677888888887653310 0232 57999999999999
Q ss_pred chHHHHHHHHhhcccCCCCceeeeEeEecCCccCc
Q 012236 183 TVPPLVQQISNENEEGIKPLINLQGYILGNPKTDK 217 (467)
Q Consensus 183 yvP~lA~~i~~~n~~~~~~~inLkGi~iGng~i~p 217 (467)
.+..++...-+.... ..+..++|+++..|.+..
T Consensus 155 i~~~~~~~~~~~~~~--~~~~~i~g~i~~s~~~~i 187 (332)
T TIGR01607 155 IALRLLELLGKSNEN--NDKLNIKGCISLSGMISI 187 (332)
T ss_pred HHHHHHHHhcccccc--ccccccceEEEeccceEE
Confidence 887777654332110 012368999888887643
No 37
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=98.27 E-value=7.3e-06 Score=82.23 Aligned_cols=61 Identities=15% Similarity=0.148 Sum_probs=50.8
Q ss_pred CCeEEEEcCCCccccCchhHHHHHHhcCCCCccCccceeeCCeeeeEEEEEecceEEEEEcC-CcccccCCChHHHHHHH
Q 012236 380 GYRSLIYSGDHDMVVPFLGTEAWIKSLNYSIIDDWRPWILHSQVAGYTRTYSNRMTYATVKG-GGHIAPEYRPAECYAMF 458 (467)
Q Consensus 380 ~irVLiY~Gd~D~i~n~~Gt~~wi~~L~w~~~~~~~~w~~~~~~aG~~k~~~~~Ltf~~V~~-AGHmvP~DqP~~a~~m~ 458 (467)
.+++||..|+.|.+++....+...+.+. .+-.+++|.+ |||+++.++|++...++
T Consensus 277 ~~PtLvi~G~~D~~~p~~~~~~~~~~i~------------------------p~a~l~~i~~~aGH~~~lE~Pe~~~~~l 332 (343)
T PRK08775 277 RVPTVVVAVEGDRLVPLADLVELAEGLG------------------------PRGSLRVLRSPYGHDAFLKETDRIDAIL 332 (343)
T ss_pred CCCeEEEEeCCCEeeCHHHHHHHHHHcC------------------------CCCeEEEEeCCccHHHHhcCHHHHHHHH
Confidence 5899999999999999887776666542 1355678874 99999999999999999
Q ss_pred HHHHcC
Q 012236 459 QRWINH 464 (467)
Q Consensus 459 ~~fl~~ 464 (467)
.+||..
T Consensus 333 ~~FL~~ 338 (343)
T PRK08775 333 TTALRS 338 (343)
T ss_pred HHHHHh
Confidence 999975
No 38
>PLN02965 Probable pheophorbidase
Probab=98.21 E-value=4.6e-05 Score=72.87 Aligned_cols=102 Identities=14% Similarity=0.135 Sum_probs=67.0
Q ss_pred EEEECCCCchHHHhHHHHhhCceEEeccCCCCCCCcceeCCCCcccCCceEEEecCCccccccccCCCCcccCchHHHHH
Q 012236 73 LLWLTGGPGCSAFSALVYEIGPINFNILEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGFSYVRTPLASQTGDFKQVHQ 152 (467)
Q Consensus 73 ~lwlnGGPG~Ss~~g~~~E~GP~~~~~~~~~~~~~~~~~n~~sW~~~an~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~ 152 (467)
||.++|.++.+..+-...+. |. .+...++-+|.| |.|.|-..... ..+.++.|+|
T Consensus 6 vvllHG~~~~~~~w~~~~~~----------------L~------~~~~~via~Dl~-G~G~S~~~~~~--~~~~~~~a~d 60 (255)
T PLN02965 6 FVFVHGASHGAWCWYKLATL----------------LD------AAGFKSTCVDLT-GAGISLTDSNT--VSSSDQYNRP 60 (255)
T ss_pred EEEECCCCCCcCcHHHHHHH----------------Hh------hCCceEEEecCC-cCCCCCCCccc--cCCHHHHHHH
Confidence 88899998766655332210 11 223689999999 99988533221 2345667777
Q ss_pred HHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEeEecCCcc
Q 012236 153 VDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGYILGNPKT 215 (467)
Q Consensus 153 ~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~iGng~i 215 (467)
+.++|.. .. . .+++++.|+|+||..+..+|.+.-+ .++++++.|+..
T Consensus 61 l~~~l~~----l~-~-~~~~~lvGhSmGG~ia~~~a~~~p~----------~v~~lvl~~~~~ 107 (255)
T PLN02965 61 LFALLSD----LP-P-DHKVILVGHSIGGGSVTEALCKFTD----------KISMAIYVAAAM 107 (255)
T ss_pred HHHHHHh----cC-C-CCCEEEEecCcchHHHHHHHHhCch----------heeEEEEEcccc
Confidence 7777753 21 1 2589999999999888888864322 378888887743
No 39
>PRK07581 hypothetical protein; Validated
Probab=98.07 E-value=0.00022 Score=71.27 Aligned_cols=59 Identities=14% Similarity=0.113 Sum_probs=50.2
Q ss_pred CCeEEEEcCCCccccCchhHHHHHHhcCCCCccCccceeeCCeeeeEEEEEecceEEEEEcC-CcccccCCChHHHHHHH
Q 012236 380 GYRSLIYSGDHDMVVPFLGTEAWIKSLNYSIIDDWRPWILHSQVAGYTRTYSNRMTYATVKG-GGHIAPEYRPAECYAMF 458 (467)
Q Consensus 380 ~irVLiY~Gd~D~i~n~~Gt~~wi~~L~w~~~~~~~~w~~~~~~aG~~k~~~~~Ltf~~V~~-AGHmvP~DqP~~a~~m~ 458 (467)
.++||+..|+.|.+++....+.+.+.+. +.++++|.+ |||+++.+||+....++
T Consensus 275 ~~PtLvI~G~~D~~~p~~~~~~l~~~ip-------------------------~a~l~~i~~~~GH~~~~~~~~~~~~~~ 329 (339)
T PRK07581 275 TAKTFVMPISTDLYFPPEDCEAEAALIP-------------------------NAELRPIESIWGHLAGFGQNPADIAFI 329 (339)
T ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHhCC-------------------------CCeEEEeCCCCCccccccCcHHHHHHH
Confidence 6899999999999999887776655432 256688898 99999999999999999
Q ss_pred HHHHc
Q 012236 459 QRWIN 463 (467)
Q Consensus 459 ~~fl~ 463 (467)
++|+.
T Consensus 330 ~~~~~ 334 (339)
T PRK07581 330 DAALK 334 (339)
T ss_pred HHHHH
Confidence 99985
No 40
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=98.04 E-value=4.9e-05 Score=90.51 Aligned_cols=107 Identities=14% Similarity=0.168 Sum_probs=71.9
Q ss_pred CCCCCEEEEECCCCchHHHhHHHHhhCceEEeccCCCCCCCcceeCCCCcccCCceEEEecCCccccccccCC-----CC
Q 012236 67 PKEDPLLLWLTGGPGCSAFSALVYEIGPINFNILEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGFSYVRTP-----LA 141 (467)
Q Consensus 67 ~~~~p~~lwlnGGPG~Ss~~g~~~E~GP~~~~~~~~~~~~~~~~~n~~sW~~~an~l~iDqPvG~GfS~~~~~-----~~ 141 (467)
.++.|.||+|+|.+|++..+-.+.+ .+ .+..+++.+|.| |.|.|..... ..
T Consensus 1368 ~~~~~~vVllHG~~~s~~~w~~~~~----------------~L-------~~~~rVi~~Dl~-G~G~S~~~~~~~~~~~~ 1423 (1655)
T PLN02980 1368 NAEGSVVLFLHGFLGTGEDWIPIMK----------------AI-------SGSARCISIDLP-GHGGSKIQNHAKETQTE 1423 (1655)
T ss_pred CCCCCeEEEECCCCCCHHHHHHHHH----------------HH-------hCCCEEEEEcCC-CCCCCCCcccccccccc
Confidence 3456899999999999987644331 01 123689999998 8888864321 01
Q ss_pred cccCchHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEeEecCCc
Q 012236 142 SQTGDFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGYILGNPK 214 (467)
Q Consensus 142 ~~~~~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~iGng~ 214 (467)
...+.+..|+++.+++.. +...+++|.|+|+||..+-.+|.+--+ .++++++.+|.
T Consensus 1424 ~~~si~~~a~~l~~ll~~-------l~~~~v~LvGhSmGG~iAl~~A~~~P~----------~V~~lVlis~~ 1479 (1655)
T PLN02980 1424 PTLSVELVADLLYKLIEH-------ITPGKVTLVGYSMGARIALYMALRFSD----------KIEGAVIISGS 1479 (1655)
T ss_pred ccCCHHHHHHHHHHHHHH-------hCCCCEEEEEECHHHHHHHHHHHhChH----------hhCEEEEECCC
Confidence 123455667776666653 234589999999999988888764322 37788777653
No 41
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=98.04 E-value=2.6e-05 Score=76.83 Aligned_cols=126 Identities=20% Similarity=0.310 Sum_probs=78.8
Q ss_pred eeeEEecCCCCceEEEEEEecCCCCCCCCEEEEECCCCchHHHhHHHHhhCceEEeccCCCCCCCcceeCCCCcccCCce
Q 012236 43 TGYVGVGESEDAQLFYYFVKSEKNPKEDPLLLWLTGGPGCSAFSALVYEIGPINFNILEYNGSLPTLHLNPYSWTKEASI 122 (467)
Q Consensus 43 sGy~~~~~~~~~~lfy~f~es~~~~~~~p~~lwlnGGPG~Ss~~g~~~E~GP~~~~~~~~~~~~~~~~~n~~sW~~~an~ 122 (467)
.+|+.+.+ +.+++|+-. .++. .|.||+++||||.++...... . + . .+..++
T Consensus 6 ~~~~~~~~--~~~l~y~~~---g~~~-~~~lvllHG~~~~~~~~~~~~-----~------------~--~----~~~~~v 56 (306)
T TIGR01249 6 SGYLNVSD--NHQLYYEQS---GNPD-GKPVVFLHGGPGSGTDPGCRR-----F------------F--D----PETYRI 56 (306)
T ss_pred CCeEEcCC--CcEEEEEEC---cCCC-CCEEEEECCCCCCCCCHHHHh-----c------------c--C----ccCCEE
Confidence 57888864 677888642 1222 355788999999865321100 0 1 0 134789
Q ss_pred EEEecCCccccccccCCCCcccCchHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCc
Q 012236 123 LFVDSPVGTGFSYVRTPLASQTGDFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPL 202 (467)
Q Consensus 123 l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~ 202 (467)
+-+|+| |.|.|..... ....+..+.++++..++. .. ...++++.|+|+||..+-.+|.+--+
T Consensus 57 i~~D~~-G~G~S~~~~~-~~~~~~~~~~~dl~~l~~----~l---~~~~~~lvG~S~GG~ia~~~a~~~p~--------- 118 (306)
T TIGR01249 57 VLFDQR-GCGKSTPHAC-LEENTTWDLVADIEKLRE----KL---GIKNWLVFGGSWGSTLALAYAQTHPE--------- 118 (306)
T ss_pred EEECCC-CCCCCCCCCC-cccCCHHHHHHHHHHHHH----Hc---CCCCEEEEEECHHHHHHHHHHHHChH---------
Confidence 999988 9998864321 112233455566555443 32 23579999999999887777764322
Q ss_pred eeeeEeEecCCccC
Q 012236 203 INLQGYILGNPKTD 216 (467)
Q Consensus 203 inLkGi~iGng~i~ 216 (467)
.++++++.+..+.
T Consensus 119 -~v~~lvl~~~~~~ 131 (306)
T TIGR01249 119 -VVTGLVLRGIFLL 131 (306)
T ss_pred -hhhhheeeccccC
Confidence 3788888877664
No 42
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=97.96 E-value=5.3e-05 Score=82.02 Aligned_cols=132 Identities=17% Similarity=0.182 Sum_probs=79.7
Q ss_pred CceEEEEEEecCC-CC-CCCCEEEEECCCCchHHHhHHHHhhCceEEeccCCCCCCCcceeCCCC-cccCCceEEEecCC
Q 012236 53 DAQLFYYFVKSEK-NP-KEDPLLLWLTGGPGCSAFSALVYEIGPINFNILEYNGSLPTLHLNPYS-WTKEASILFVDSPV 129 (467)
Q Consensus 53 ~~~lfy~f~es~~-~~-~~~p~~lwlnGGPG~Ss~~g~~~E~GP~~~~~~~~~~~~~~~~~n~~s-W~~~an~l~iDqPv 129 (467)
+..+..|++.... ++ ++-|+|++++||| +++.+ +.+. .+... +.+-+.||+++---
T Consensus 375 G~~i~~~l~~P~~~~~~k~yP~i~~~hGGP--~~~~~-------~~~~------------~~~q~~~~~G~~V~~~n~RG 433 (620)
T COG1506 375 GETIHGWLYKPPGFDPRKKYPLIVYIHGGP--SAQVG-------YSFN------------PEIQVLASAGYAVLAPNYRG 433 (620)
T ss_pred CCEEEEEEecCCCCCCCCCCCEEEEeCCCC--ccccc-------cccc------------hhhHHHhcCCeEEEEeCCCC
Confidence 6689999887643 22 2359999999999 44443 0111 11111 23456888888443
Q ss_pred ccccccccCCCCcccCchHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEeE
Q 012236 130 GTGFSYVRTPLASQTGDFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGYI 209 (467)
Q Consensus 130 G~GfS~~~~~~~~~~~~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~ 209 (467)
-+||+..-.......--....+|+.+++. |+...|..-...+.|+|.||||...-.++.+- . -++..+
T Consensus 434 S~GyG~~F~~~~~~~~g~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~----------~-~f~a~~ 501 (620)
T COG1506 434 STGYGREFADAIRGDWGGVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAATKT----------P-RFKAAV 501 (620)
T ss_pred CCccHHHHHHhhhhccCCccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHhcC----------c-hhheEE
Confidence 44554321111100011234577888888 88899977778899999999997665555421 1 266666
Q ss_pred ecCCccCc
Q 012236 210 LGNPKTDK 217 (467)
Q Consensus 210 iGng~i~p 217 (467)
...|.++.
T Consensus 502 ~~~~~~~~ 509 (620)
T COG1506 502 AVAGGVDW 509 (620)
T ss_pred eccCcchh
Confidence 66655544
No 43
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=97.72 E-value=0.00084 Score=68.34 Aligned_cols=64 Identities=17% Similarity=0.183 Sum_probs=51.2
Q ss_pred CCeEEEEcCCCccccCchhHHHHHHhcCCCCccCccceeeCCeeeeEEEEEecceEEEEEc-CCcccccCCChHHHHHHH
Q 012236 380 GYRSLIYSGDHDMVVPFLGTEAWIKSLNYSIIDDWRPWILHSQVAGYTRTYSNRMTYATVK-GGGHIAPEYRPAECYAMF 458 (467)
Q Consensus 380 ~irVLiY~Gd~D~i~n~~Gt~~wi~~L~w~~~~~~~~w~~~~~~aG~~k~~~~~Ltf~~V~-~AGHmvP~DqP~~a~~m~ 458 (467)
.++|||..|+.|.+++....+...+.+. ..+...+++.|. ++||+.+.++|+...+.+
T Consensus 309 ~~PtLvI~G~~D~~~p~~~~~~la~~i~---------------------~a~~~~~l~~i~~~~GH~~~le~p~~~~~~L 367 (379)
T PRK00175 309 KARFLVVSFTSDWLFPPARSREIVDALL---------------------AAGADVSYAEIDSPYGHDAFLLDDPRYGRLV 367 (379)
T ss_pred CCCEEEEEECCccccCHHHHHHHHHHHH---------------------hcCCCeEEEEeCCCCCchhHhcCHHHHHHHH
Confidence 5899999999999999887765555432 011235778886 999999999999999999
Q ss_pred HHHHcC
Q 012236 459 QRWINH 464 (467)
Q Consensus 459 ~~fl~~ 464 (467)
.+|+.+
T Consensus 368 ~~FL~~ 373 (379)
T PRK00175 368 RAFLER 373 (379)
T ss_pred HHHHHh
Confidence 999975
No 44
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=97.71 E-value=0.00011 Score=73.09 Aligned_cols=132 Identities=23% Similarity=0.283 Sum_probs=82.6
Q ss_pred EEEEEEec--CCCCCCCCEEEEECCCCchHHHhHHHHhhCceEEeccCCCCCCCcceeCCCCcccCCceEEEecCCcccc
Q 012236 56 LFYYFVKS--EKNPKEDPLLLWLTGGPGCSAFSALVYEIGPINFNILEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGF 133 (467)
Q Consensus 56 lfy~f~es--~~~~~~~p~~lwlnGGPG~Ss~~g~~~E~GP~~~~~~~~~~~~~~~~~n~~sW~~~an~l~iDqPvG~Gf 133 (467)
-.||++++ +.+|++||+||+++|| |.+.+.=|+.+.. -.+-|..-+...+|.+|-..-.
T Consensus 106 ~s~Wlvk~P~~~~pk~DpVlIYlHGG-------GY~l~~~p~qi~~----------L~~i~~~l~~~SILvLDYsLt~-- 166 (374)
T PF10340_consen 106 QSYWLVKAPNRFKPKSDPVLIYLHGG-------GYFLGTTPSQIEF----------LLNIYKLLPEVSILVLDYSLTS-- 166 (374)
T ss_pred ceEEEEeCCcccCCCCCcEEEEEcCC-------eeEecCCHHHHHH----------HHHHHHHcCCCeEEEEeccccc--
Confidence 45899985 3468889999999999 5566665655431 1111222223499999965332
Q ss_pred ccccCCCCcccCchHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEeEecCC
Q 012236 134 SYVRTPLASQTGDFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGYILGNP 213 (467)
Q Consensus 134 S~~~~~~~~~~~~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~iGng 213 (467)
.......+++-. .++.+..+...+.. ...++.|+|+|=||+.+-.+..++.+.++. .. =|++++..|
T Consensus 167 -~~~~~~~yPtQL----~qlv~~Y~~Lv~~~---G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~----~~-Pk~~iLISP 233 (374)
T PF10340_consen 167 -SDEHGHKYPTQL----RQLVATYDYLVESE---GNKNIILMGDSAGGNLALSFLQYLKKPNKL----PY-PKSAILISP 233 (374)
T ss_pred -cccCCCcCchHH----HHHHHHHHHHHhcc---CCCeEEEEecCccHHHHHHHHHHHhhcCCC----CC-CceeEEECC
Confidence 000122233222 23334444444322 246899999999999999999998765531 12 278999999
Q ss_pred ccCccc
Q 012236 214 KTDKIV 219 (467)
Q Consensus 214 ~i~p~~ 219 (467)
|+++..
T Consensus 234 Wv~l~~ 239 (374)
T PF10340_consen 234 WVNLVP 239 (374)
T ss_pred CcCCcC
Confidence 999973
No 45
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=97.71 E-value=8.7e-05 Score=67.95 Aligned_cols=104 Identities=19% Similarity=0.211 Sum_probs=72.6
Q ss_pred EEEECCCCchHHHhHHHHhhCceEEeccCCCCCCCcceeCCCCcccCCceEEEecCCccccccccCCCCcccCchHHHHH
Q 012236 73 LLWLTGGPGCSAFSALVYEIGPINFNILEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGFSYVRTPLASQTGDFKQVHQ 152 (467)
Q Consensus 73 ~lwlnGGPG~Ss~~g~~~E~GP~~~~~~~~~~~~~~~~~n~~sW~~~an~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~ 152 (467)
||+++|.+|.+..+.-+.+. +. +..+++.+|.| |.|.|..... ....+.++.+++
T Consensus 1 vv~~hG~~~~~~~~~~~~~~----------------l~-------~~~~v~~~d~~-G~G~s~~~~~-~~~~~~~~~~~~ 55 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEA----------------LA-------RGYRVIAFDLP-GHGRSDPPPD-YSPYSIEDYAED 55 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHH----------------HH-------TTSEEEEEECT-TSTTSSSHSS-GSGGSHHHHHHH
T ss_pred eEEECCCCCCHHHHHHHHHH----------------Hh-------CCCEEEEEecC-Cccccccccc-cCCcchhhhhhh
Confidence 68999999998766544421 21 35689999999 9998875442 112345566666
Q ss_pred HHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEeEecCCccCcc
Q 012236 153 VDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGYILGNPKTDKI 218 (467)
Q Consensus 153 ~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~iGng~i~p~ 218 (467)
+.++|+. .. ..+++|.|+|+||..+-.+|.+.-+ .++|+++.++.....
T Consensus 56 l~~~l~~----~~---~~~~~lvG~S~Gg~~a~~~a~~~p~----------~v~~~vl~~~~~~~~ 104 (228)
T PF12697_consen 56 LAELLDA----LG---IKKVILVGHSMGGMIALRLAARYPD----------RVKGLVLLSPPPPLP 104 (228)
T ss_dssp HHHHHHH----TT---TSSEEEEEETHHHHHHHHHHHHSGG----------GEEEEEEESESSSHH
T ss_pred hhhcccc----cc---ccccccccccccccccccccccccc----------ccccceeeccccccc
Confidence 6666654 32 2689999999999999888865322 589999999888653
No 46
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=97.68 E-value=0.00022 Score=67.24 Aligned_cols=100 Identities=25% Similarity=0.244 Sum_probs=69.4
Q ss_pred CCEEEEECCCCchHHHhHHHHhhCceEEeccCCCCCCCcceeCCCCcccCCceEEEecCCccccccccCCCCcccCchHH
Q 012236 70 DPLLLWLTGGPGCSAFSALVYEIGPINFNILEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGFSYVRTPLASQTGDFKQ 149 (467)
Q Consensus 70 ~p~~lwlnGGPG~Ss~~g~~~E~GP~~~~~~~~~~~~~~~~~n~~sW~~~an~l~iDqPvG~GfS~~~~~~~~~~~~~~~ 149 (467)
.|.||+++|.||++..+-.+.+. + +..+++-+|.| |.|.|.... ..+-++.
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~~~----------------l--------~~~~vi~~D~~-G~G~S~~~~----~~~~~~~ 52 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVGEA----------------L--------PDYPRLYIDLP-GHGGSAAIS----VDGFADV 52 (242)
T ss_pred CCEEEEECCCCCChHHHHHHHHH----------------c--------CCCCEEEecCC-CCCCCCCcc----ccCHHHH
Confidence 58899999999998877544310 1 23799999988 888885322 1245566
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEeEecCCc
Q 012236 150 VHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGYILGNPK 214 (467)
Q Consensus 150 a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~iGng~ 214 (467)
|+++.++|.. +...++++.|+|+||..+-.+|.+.... .++++++.++.
T Consensus 53 ~~~l~~~l~~-------~~~~~~~lvG~S~Gg~va~~~a~~~~~~---------~v~~lvl~~~~ 101 (242)
T PRK11126 53 SRLLSQTLQS-------YNILPYWLVGYSLGGRIAMYYACQGLAG---------GLCGLIVEGGN 101 (242)
T ss_pred HHHHHHHHHH-------cCCCCeEEEEECHHHHHHHHHHHhCCcc---------cccEEEEeCCC
Confidence 6666666653 2346899999999998888887753110 27888887654
No 47
>PRK06489 hypothetical protein; Provisional
Probab=97.67 E-value=0.0004 Score=70.17 Aligned_cols=60 Identities=15% Similarity=0.070 Sum_probs=46.4
Q ss_pred CCeEEEEcCCCccccCchhH--HHHHHhcCCCCccCccceeeCCeeeeEEEEEecceEEEEEcCC----cccccCCChHH
Q 012236 380 GYRSLIYSGDHDMVVPFLGT--EAWIKSLNYSIIDDWRPWILHSQVAGYTRTYSNRMTYATVKGG----GHIAPEYRPAE 453 (467)
Q Consensus 380 ~irVLiY~Gd~D~i~n~~Gt--~~wi~~L~w~~~~~~~~w~~~~~~aG~~k~~~~~Ltf~~V~~A----GHmvP~DqP~~ 453 (467)
.++|||.+|+.|.+++.... +...+.+ .+-.+++|.+| ||++. ++|+.
T Consensus 292 ~~PvLvI~G~~D~~~p~~~~~~~~la~~i-------------------------p~a~l~~i~~a~~~~GH~~~-e~P~~ 345 (360)
T PRK06489 292 KAPVLAINSADDERNPPETGVMEAALKRV-------------------------KHGRLVLIPASPETRGHGTT-GSAKF 345 (360)
T ss_pred CCCEEEEecCCCcccChhhHHHHHHHHhC-------------------------cCCeEEEECCCCCCCCcccc-cCHHH
Confidence 68999999999999987644 2232221 13567889986 99985 89999
Q ss_pred HHHHHHHHHcCC
Q 012236 454 CYAMFQRWINHD 465 (467)
Q Consensus 454 a~~m~~~fl~~~ 465 (467)
..+.+.+|+..-
T Consensus 346 ~~~~i~~FL~~~ 357 (360)
T PRK06489 346 WKAYLAEFLAQV 357 (360)
T ss_pred HHHHHHHHHHhc
Confidence 999999999753
No 48
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=97.47 E-value=0.018 Score=55.31 Aligned_cols=127 Identities=18% Similarity=0.109 Sum_probs=85.4
Q ss_pred CceEEEEEEecCCCCCCCCEEEEECCCCchHHH-hHHHHhhCceEEeccCCCCCCCcceeCCCCcccCCceEEEecCCcc
Q 012236 53 DAQLFYYFVKSEKNPKEDPLLLWLTGGPGCSAF-SALVYEIGPINFNILEYNGSLPTLHLNPYSWTKEASILFVDSPVGT 131 (467)
Q Consensus 53 ~~~lfy~f~es~~~~~~~p~~lwlnGGPG~Ss~-~g~~~E~GP~~~~~~~~~~~~~~~~~n~~sW~~~an~l~iDqPvG~ 131 (467)
+..||.-.+....+++.+-+|+.++|.=+-||- +--+.. +++. .-.-+--+|+. |.
T Consensus 37 G~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~----~l~~------------------~g~~v~a~D~~-Gh 93 (313)
T KOG1455|consen 37 GAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAK----RLAK------------------SGFAVYAIDYE-GH 93 (313)
T ss_pred CCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHH----HHHh------------------CCCeEEEeecc-CC
Confidence 678998655555445677889999987665532 211110 0111 11236678988 99
Q ss_pred ccccccCCCCcccCchHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEeEec
Q 012236 132 GFSYVRTPLASQTGDFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGYILG 211 (467)
Q Consensus 132 GfS~~~~~~~~~~~~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~iG 211 (467)
|.|-+- ..+..+-+.+.+|...|+..+ ...+++++.|.|+.|||-||--+-.++.+ +. --..|+++.
T Consensus 94 G~SdGl--~~yi~~~d~~v~D~~~~~~~i-~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k--~p--------~~w~G~ilv 160 (313)
T KOG1455|consen 94 GRSDGL--HAYVPSFDLVVDDVISFFDSI-KEREENKGLPRFLFGESMGGAVALLIALK--DP--------NFWDGAILV 160 (313)
T ss_pred CcCCCC--cccCCcHHHHHHHHHHHHHHH-hhccccCCCCeeeeecCcchHHHHHHHhh--CC--------cccccceee
Confidence 999753 456778888889988888765 35677889999999999999776666654 21 136777776
Q ss_pred CCcc
Q 012236 212 NPKT 215 (467)
Q Consensus 212 ng~i 215 (467)
.|+.
T Consensus 161 aPmc 164 (313)
T KOG1455|consen 161 APMC 164 (313)
T ss_pred eccc
Confidence 6654
No 49
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.37 E-value=0.0041 Score=61.83 Aligned_cols=60 Identities=28% Similarity=0.429 Sum_probs=51.2
Q ss_pred CCeEEEEcCCCccccCchhHHHHHHhcCCCCccCccceeeCCeeeeEEEEEecceEEEEEcCCcccccCCChHHHHHHHH
Q 012236 380 GYRSLIYSGDHDMVVPFLGTEAWIKSLNYSIIDDWRPWILHSQVAGYTRTYSNRMTYATVKGGGHIAPEYRPAECYAMFQ 459 (467)
Q Consensus 380 ~irVLiY~Gd~D~i~n~~Gt~~wi~~L~w~~~~~~~~w~~~~~~aG~~k~~~~~Ltf~~V~~AGHmvP~DqP~~a~~m~~ 459 (467)
+.+|||..|+.|.+++....+...++ . .|..+..|.+|||.+..++|++....+.
T Consensus 264 ~~pvlii~G~~D~~~p~~~~~~~~~~------------------------~-pn~~~~~I~~~gH~~h~e~Pe~~~~~i~ 318 (326)
T KOG1454|consen 264 KCPVLIIWGDKDQIVPLELAEELKKK------------------------L-PNAELVEIPGAGHLPHLERPEEVAALLR 318 (326)
T ss_pred CCceEEEEcCcCCccCHHHHHHHHhh------------------------C-CCceEEEeCCCCcccccCCHHHHHHHHH
Confidence 47899999999999999855444333 2 3689999999999999999999999999
Q ss_pred HHHcC
Q 012236 460 RWINH 464 (467)
Q Consensus 460 ~fl~~ 464 (467)
.|+.+
T Consensus 319 ~Fi~~ 323 (326)
T KOG1454|consen 319 SFIAR 323 (326)
T ss_pred HHHHH
Confidence 99975
No 50
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=97.26 E-value=0.0025 Score=65.58 Aligned_cols=120 Identities=17% Similarity=0.141 Sum_probs=73.4
Q ss_pred eEEEEEEecCCCCCCCCEEEEECCCCchH--HHhHHHHhhCceEEeccCCCCCCCcceeCCCCcccCCceEEEecCCccc
Q 012236 55 QLFYYFVKSEKNPKEDPLLLWLTGGPGCS--AFSALVYEIGPINFNILEYNGSLPTLHLNPYSWTKEASILFVDSPVGTG 132 (467)
Q Consensus 55 ~lfy~f~es~~~~~~~p~~lwlnGGPG~S--s~~g~~~E~GP~~~~~~~~~~~~~~~~~n~~sW~~~an~l~iDqPvG~G 132 (467)
.|--|++... ..+..|+|| +.||.++. .++..+. +. +. .+=.++|-+|.| |+|
T Consensus 180 ~l~g~l~~P~-~~~~~P~Vl-i~gG~~~~~~~~~~~~~---~~-------------La------~~Gy~vl~~D~p-G~G 234 (414)
T PRK05077 180 PITGFLHLPK-GDGPFPTVL-VCGGLDSLQTDYYRLFR---DY-------------LA------PRGIAMLTIDMP-SVG 234 (414)
T ss_pred EEEEEEEECC-CCCCccEEE-EeCCcccchhhhHHHHH---HH-------------HH------hCCCEEEEECCC-CCC
Confidence 5666655443 235578887 56777753 2332221 10 10 112679999999 999
Q ss_pred cccccCCCCcccCchHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEeEecC
Q 012236 133 FSYVRTPLASQTGDFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGYILGN 212 (467)
Q Consensus 133 fS~~~~~~~~~~~~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~iGn 212 (467)
.|..... . .+ ...+...+.+++...|.....++.|+|.|+||.+++.+|..-. -.++++++.+
T Consensus 235 ~s~~~~~---~-~d---~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p----------~ri~a~V~~~ 297 (414)
T PRK05077 235 FSSKWKL---T-QD---SSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEP----------PRLKAVACLG 297 (414)
T ss_pred CCCCCCc---c-cc---HHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCC----------cCceEEEEEC
Confidence 9854211 1 11 1122234455666677666778999999999999998885421 1378988888
Q ss_pred CccC
Q 012236 213 PKTD 216 (467)
Q Consensus 213 g~i~ 216 (467)
|.++
T Consensus 298 ~~~~ 301 (414)
T PRK05077 298 PVVH 301 (414)
T ss_pred Cccc
Confidence 7764
No 51
>PLN02872 triacylglycerol lipase
Probab=97.23 E-value=0.0047 Score=63.04 Aligned_cols=61 Identities=13% Similarity=0.170 Sum_probs=48.6
Q ss_pred CCeEEEEcCCCccccCchhHHHHHHhcCCCCccCccceeeCCeeeeEEEEEecceEEEEEcCCccc---ccCCChHHHHH
Q 012236 380 GYRSLIYSGDHDMVVPFLGTEAWIKSLNYSIIDDWRPWILHSQVAGYTRTYSNRMTYATVKGGGHI---APEYRPAECYA 456 (467)
Q Consensus 380 ~irVLiY~Gd~D~i~n~~Gt~~wi~~L~w~~~~~~~~w~~~~~~aG~~k~~~~~Ltf~~V~~AGHm---vP~DqP~~a~~ 456 (467)
+++|+|+.|..|.+++....+++.+.+. +.-.+..+.++||+ ...+.|+..++
T Consensus 325 ~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp------------------------~~~~l~~l~~~gH~dfi~~~eape~V~~ 380 (395)
T PLN02872 325 SLPLWMGYGGTDGLADVTDVEHTLAELP------------------------SKPELLYLENYGHIDFLLSTSAKEDVYN 380 (395)
T ss_pred CccEEEEEcCCCCCCCHHHHHHHHHHCC------------------------CccEEEEcCCCCCHHHHhCcchHHHHHH
Confidence 5899999999999999998888887764 00134567899996 45589999999
Q ss_pred HHHHHHcC
Q 012236 457 MFQRWINH 464 (467)
Q Consensus 457 m~~~fl~~ 464 (467)
-+.+|+.+
T Consensus 381 ~Il~fL~~ 388 (395)
T PLN02872 381 HMIQFFRS 388 (395)
T ss_pred HHHHHHHH
Confidence 99888864
No 52
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=97.09 E-value=0.005 Score=59.32 Aligned_cols=125 Identities=14% Similarity=0.104 Sum_probs=77.1
Q ss_pred CceEEEEEEecCCCCCCCCEEEEECCCCc---hHH-HhHHHHhhCceEEeccCCCCCCCcceeCCCCcccCCceEEEecC
Q 012236 53 DAQLFYYFVKSEKNPKEDPLLLWLTGGPG---CSA-FSALVYEIGPINFNILEYNGSLPTLHLNPYSWTKEASILFVDSP 128 (467)
Q Consensus 53 ~~~lfy~f~es~~~~~~~p~~lwlnGGPG---~Ss-~~g~~~E~GP~~~~~~~~~~~~~~~~~n~~sW~~~an~l~iDqP 128 (467)
..++|.|+++.... ..+|+||.++|-.+ ++. ++..+. .. +. .+-.+++-+|.|
T Consensus 9 ~g~~~~~~~~p~~~-~~~~~VlllHG~g~~~~~~~~~~~~la---~~-------------La------~~Gy~Vl~~Dl~ 65 (266)
T TIGR03101 9 HGFRFCLYHPPVAV-GPRGVVIYLPPFAEEMNKSRRMVALQA---RA-------------FA------AGGFGVLQIDLY 65 (266)
T ss_pred CCcEEEEEecCCCC-CCceEEEEECCCcccccchhHHHHHHH---HH-------------HH------HCCCEEEEECCC
Confidence 46688888876532 33699999998543 111 211111 00 10 123689999999
Q ss_pred CccccccccCCCCcccCchHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEe
Q 012236 129 VGTGFSYVRTPLASQTGDFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGY 208 (467)
Q Consensus 129 vG~GfS~~~~~~~~~~~~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi 208 (467)
|.|.|.+.... .+.....+|+..++. +++... ..+++|.|+|.||..+..+|.+.- -.++++
T Consensus 66 -G~G~S~g~~~~---~~~~~~~~Dv~~ai~-~L~~~~---~~~v~LvG~SmGG~vAl~~A~~~p----------~~v~~l 127 (266)
T TIGR03101 66 -GCGDSAGDFAA---ARWDVWKEDVAAAYR-WLIEQG---HPPVTLWGLRLGALLALDAANPLA----------AKCNRL 127 (266)
T ss_pred -CCCCCCCcccc---CCHHHHHHHHHHHHH-HHHhcC---CCCEEEEEECHHHHHHHHHHHhCc----------cccceE
Confidence 99988643221 133344555554433 333322 358999999999999888775421 147889
Q ss_pred EecCCccCcc
Q 012236 209 ILGNPKTDKI 218 (467)
Q Consensus 209 ~iGng~i~p~ 218 (467)
++-+|.++..
T Consensus 128 VL~~P~~~g~ 137 (266)
T TIGR03101 128 VLWQPVVSGK 137 (266)
T ss_pred EEeccccchH
Confidence 9999888755
No 53
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=96.95 E-value=0.0036 Score=60.63 Aligned_cols=107 Identities=13% Similarity=0.139 Sum_probs=68.8
Q ss_pred CCCCEEEEECCCCchHHHhHHHHhhCceEEeccCCCCCCCcceeCCCCcccCCceEEEecCCccccccccCCCCcccCch
Q 012236 68 KEDPLLLWLTGGPGCSAFSALVYEIGPINFNILEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGFSYVRTPLASQTGDF 147 (467)
Q Consensus 68 ~~~p~~lwlnGGPG~Ss~~g~~~E~GP~~~~~~~~~~~~~~~~~n~~sW~~~an~l~iDqPvG~GfS~~~~~~~~~~~~~ 147 (467)
.+.|.||+++|..+.++.+..+.+. +.. +-.+++-+|.| |.|.|...... ..+.+
T Consensus 16 ~~~p~vvliHG~~~~~~~w~~~~~~----------------L~~------~g~~vi~~dl~-g~G~s~~~~~~--~~~~~ 70 (273)
T PLN02211 16 RQPPHFVLIHGISGGSWCWYKIRCL----------------MEN------SGYKVTCIDLK-SAGIDQSDADS--VTTFD 70 (273)
T ss_pred CCCCeEEEECCCCCCcCcHHHHHHH----------------HHh------CCCEEEEeccc-CCCCCCCCccc--CCCHH
Confidence 5679999999988777666433310 111 23689999999 88877432211 13555
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEeEecCCcc
Q 012236 148 KQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGYILGNPKT 215 (467)
Q Consensus 148 ~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~iGng~i 215 (467)
+.++++.++|+ ... ...+++|.|+||||..+-.++.+.-+ .++++++.++..
T Consensus 71 ~~~~~l~~~i~----~l~--~~~~v~lvGhS~GG~v~~~~a~~~p~----------~v~~lv~~~~~~ 122 (273)
T PLN02211 71 EYNKPLIDFLS----SLP--ENEKVILVGHSAGGLSVTQAIHRFPK----------KICLAVYVAATM 122 (273)
T ss_pred HHHHHHHHHHH----hcC--CCCCEEEEEECchHHHHHHHHHhChh----------heeEEEEecccc
Confidence 56666555554 322 14689999999999977777754211 377888876643
No 54
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=96.93 E-value=0.0036 Score=58.12 Aligned_cols=118 Identities=14% Similarity=0.054 Sum_probs=59.6
Q ss_pred CCCCCEEEEECCCCchHHHhHHHHhhCceEEeccCCCCCCCcceeCCCCcccCCceEEEecCCccccccccCC--CCcc-
Q 012236 67 PKEDPLLLWLTGGPGCSAFSALVYEIGPINFNILEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGFSYVRTP--LASQ- 143 (467)
Q Consensus 67 ~~~~p~~lwlnGGPG~Ss~~g~~~E~GP~~~~~~~~~~~~~~~~~n~~sW~~~an~l~iDqPvG~GfS~~~~~--~~~~- 143 (467)
.+..|+||+|+|+++.++....- .+ +.. +- + ..-..+|..|.| |.|.+...-. ....
T Consensus 10 ~~~~P~vv~lHG~~~~~~~~~~~--~~---~~~---------~a-~----~~g~~Vv~Pd~~-g~~~~~~~~~~~~~~~~ 69 (212)
T TIGR01840 10 TGPRALVLALHGCGQTASAYVID--WG---WKA---------AA-D----RYGFVLVAPEQT-SYNSSNNCWDWFFTHHR 69 (212)
T ss_pred CCCCCEEEEeCCCCCCHHHHhhh--cC---hHH---------HH-H----hCCeEEEecCCc-CccccCCCCCCCCcccc
Confidence 45689999999999876643210 00 000 00 0 122467777766 4332211000 0000
Q ss_pred cCchHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEeEecCCcc
Q 012236 144 TGDFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGYILGNPKT 215 (467)
Q Consensus 144 ~~~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~iGng~i 215 (467)
........++..++....+.++ ....+++|+|+|.||..+-.+|.+ ..+ .+.++++..|..
T Consensus 70 ~~~~~~~~~~~~~i~~~~~~~~-id~~~i~l~G~S~Gg~~a~~~a~~---~p~-------~~~~~~~~~g~~ 130 (212)
T TIGR01840 70 ARGTGEVESLHQLIDAVKANYS-IDPNRVYVTGLSAGGGMTAVLGCT---YPD-------VFAGGASNAGLP 130 (212)
T ss_pred CCCCccHHHHHHHHHHHHHhcC-cChhheEEEEECHHHHHHHHHHHh---Cch-------hheEEEeecCCc
Confidence 0001122334444444434443 444689999999999877666643 111 267776666653
No 55
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=96.77 E-value=0.027 Score=54.52 Aligned_cols=42 Identities=10% Similarity=0.022 Sum_probs=31.1
Q ss_pred CCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEeEecCCccCcc
Q 012236 167 FLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGYILGNPKTDKI 218 (467)
Q Consensus 167 ~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~iGng~i~p~ 218 (467)
....+++|+|.|.||..+-.+|.+--+ .+++++..+|+.++.
T Consensus 135 ~~~~~~~~~G~S~GG~~a~~~a~~~p~----------~~~~~~~~~~~~~~~ 176 (275)
T TIGR02821 135 LDGERQGITGHSMGGHGALVIALKNPD----------RFKSVSAFAPIVAPS 176 (275)
T ss_pred CCCCceEEEEEChhHHHHHHHHHhCcc----------cceEEEEECCccCcc
Confidence 445689999999999877777654211 368999889888763
No 56
>PRK05855 short chain dehydrogenase; Validated
Probab=96.68 E-value=0.011 Score=63.42 Aligned_cols=97 Identities=15% Similarity=0.161 Sum_probs=66.2
Q ss_pred CceEEEEEEecCCCCCCCCEEEEECCCCchHHHhHHHHhhCceEEeccCCCCCCCcceeCCCCcccCCceEEEecCCccc
Q 012236 53 DAQLFYYFVKSEKNPKEDPLLLWLTGGPGCSAFSALVYEIGPINFNILEYNGSLPTLHLNPYSWTKEASILFVDSPVGTG 132 (467)
Q Consensus 53 ~~~lfy~f~es~~~~~~~p~~lwlnGGPG~Ss~~g~~~E~GP~~~~~~~~~~~~~~~~~n~~sW~~~an~l~iDqPvG~G 132 (467)
+..+.|+-+. +.+.|.||.++|.++.+..+.-+.+. + .+..+++-+|.| |.|
T Consensus 12 g~~l~~~~~g----~~~~~~ivllHG~~~~~~~w~~~~~~----------------L-------~~~~~Vi~~D~~-G~G 63 (582)
T PRK05855 12 GVRLAVYEWG----DPDRPTVVLVHGYPDNHEVWDGVAPL----------------L-------ADRFRVVAYDVR-GAG 63 (582)
T ss_pred CEEEEEEEcC----CCCCCeEEEEcCCCchHHHHHHHHHH----------------h-------hcceEEEEecCC-CCC
Confidence 5678876442 23478999999999888776543321 2 123689999999 999
Q ss_pred cccccCCCCcccCchHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccch
Q 012236 133 FSYVRTPLASQTGDFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITV 184 (467)
Q Consensus 133 fS~~~~~~~~~~~~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yv 184 (467)
.|....... ..+.++.++|+..+++.. -+ .++++|.|+|+||..+
T Consensus 64 ~S~~~~~~~-~~~~~~~a~dl~~~i~~l---~~---~~~~~lvGhS~Gg~~a 108 (582)
T PRK05855 64 RSSAPKRTA-AYTLARLADDFAAVIDAV---SP---DRPVHLLAHDWGSIQG 108 (582)
T ss_pred CCCCCCccc-ccCHHHHHHHHHHHHHHh---CC---CCcEEEEecChHHHHH
Confidence 996433211 235667888888888753 11 3579999999999544
No 57
>PLN02511 hydrolase
Probab=96.62 E-value=0.029 Score=57.24 Aligned_cols=115 Identities=18% Similarity=0.199 Sum_probs=71.1
Q ss_pred eeEEecCCCCceEEEEEEec--CCCCCCCCEEEEECCCCchHHH-h--HHHHhhCceEEeccCCCCCCCcceeCCCCccc
Q 012236 44 GYVGVGESEDAQLFYYFVKS--EKNPKEDPLLLWLTGGPGCSAF-S--ALVYEIGPINFNILEYNGSLPTLHLNPYSWTK 118 (467)
Q Consensus 44 Gy~~~~~~~~~~lfy~f~es--~~~~~~~p~~lwlnGGPG~Ss~-~--g~~~E~GP~~~~~~~~~~~~~~~~~n~~sW~~ 118 (467)
-++...+ +..+.+.++.. ...+.+.|+||.|+|..|+|.. + .+..+ + . .+
T Consensus 74 e~l~~~D--G~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~-----------------~--~----~~ 128 (388)
T PLN02511 74 ECLRTPD--GGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHMLLR-----------------A--R----SK 128 (388)
T ss_pred EEEECCC--CCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHHHH-----------------H--H----HC
Confidence 4555543 45666633331 2234678999999999998742 1 11110 0 0 23
Q ss_pred CCceEEEecCCccccccccCCCCcccCchHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHH
Q 012236 119 EASILFVDSPVGTGFSYVRTPLASQTGDFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQ 190 (467)
Q Consensus 119 ~an~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~ 190 (467)
-.+++-+|.| |.|-|.......+ ....++|+.++++..-.++| +.++++.|+|.||..+-.++.+
T Consensus 129 g~~vv~~d~r-G~G~s~~~~~~~~---~~~~~~Dl~~~i~~l~~~~~---~~~~~lvG~SlGg~i~~~yl~~ 193 (388)
T PLN02511 129 GWRVVVFNSR-GCADSPVTTPQFY---SASFTGDLRQVVDHVAGRYP---SANLYAAGWSLGANILVNYLGE 193 (388)
T ss_pred CCEEEEEecC-CCCCCCCCCcCEE---cCCchHHHHHHHHHHHHHCC---CCCEEEEEechhHHHHHHHHHh
Confidence 4589999998 8887754322211 12345677777766656666 5689999999999886665543
No 58
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=96.50 E-value=0.034 Score=54.60 Aligned_cols=138 Identities=17% Similarity=0.214 Sum_probs=91.2
Q ss_pred eeEeeeEEecCCCCceEEEEEEecCCCCCCCCEEEEECCCCchHHHhHHHHhhCceEEeccCCCCCCCcceeCCCCcccC
Q 012236 40 ELETGYVGVGESEDAQLFYYFVKSEKNPKEDPLLLWLTGGPGCSAFSALVYEIGPINFNILEYNGSLPTLHLNPYSWTKE 119 (467)
Q Consensus 40 ~~~sGy~~~~~~~~~~lfy~f~es~~~~~~~p~~lwlnGGPG~Ss~~g~~~E~GP~~~~~~~~~~~~~~~~~n~~sW~~~ 119 (467)
....|+....+ +..++|+.+++.+++. .+|++++|.=..+.-+--+.+. +. .+=
T Consensus 8 ~~~~~~~~~~d--~~~~~~~~~~~~~~~~--g~Vvl~HG~~Eh~~ry~~la~~----------------l~------~~G 61 (298)
T COG2267 8 TRTEGYFTGAD--GTRLRYRTWAAPEPPK--GVVVLVHGLGEHSGRYEELADD----------------LA------ARG 61 (298)
T ss_pred ccccceeecCC--CceEEEEeecCCCCCC--cEEEEecCchHHHHHHHHHHHH----------------HH------hCC
Confidence 33455555443 6889999888765544 8999999986665544332210 11 122
Q ss_pred CceEEEecCCccccccccCCCCcccCchHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCC
Q 012236 120 ASILFVDSPVGTGFSYVRTPLASQTGDFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGI 199 (467)
Q Consensus 120 an~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~ 199 (467)
..++=+|+| |.|.|.- ...+...+-++.-.|+..|++..-...| ..|+||.|+|-||-.+...+..-.
T Consensus 62 ~~V~~~D~R-GhG~S~r-~~rg~~~~f~~~~~dl~~~~~~~~~~~~---~~p~~l~gHSmGg~Ia~~~~~~~~------- 129 (298)
T COG2267 62 FDVYALDLR-GHGRSPR-GQRGHVDSFADYVDDLDAFVETIAEPDP---GLPVFLLGHSMGGLIALLYLARYP------- 129 (298)
T ss_pred CEEEEecCC-CCCCCCC-CCcCCchhHHHHHHHHHHHHHHHhccCC---CCCeEEEEeCcHHHHHHHHHHhCC-------
Confidence 578889999 9999962 1222233334555566666665544444 679999999999987777665432
Q ss_pred CCceeeeEeEecCCccCcc
Q 012236 200 KPLINLQGYILGNPKTDKI 218 (467)
Q Consensus 200 ~~~inLkGi~iGng~i~p~ 218 (467)
-+++|+++-+|++...
T Consensus 130 ---~~i~~~vLssP~~~l~ 145 (298)
T COG2267 130 ---PRIDGLVLSSPALGLG 145 (298)
T ss_pred ---ccccEEEEECccccCC
Confidence 2589999999998875
No 59
>PLN02442 S-formylglutathione hydrolase
Probab=96.46 E-value=0.039 Score=53.73 Aligned_cols=57 Identities=12% Similarity=0.111 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEeEecCCccCcc
Q 012236 149 QVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGYILGNPKTDKI 218 (467)
Q Consensus 149 ~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~iGng~i~p~ 218 (467)
..+++...+..++.. +...+++|+|.|+||+-+-.+|.+- .+ .+++++..+|..++.
T Consensus 125 ~~~~l~~~i~~~~~~---~~~~~~~i~G~S~GG~~a~~~a~~~---p~-------~~~~~~~~~~~~~~~ 181 (283)
T PLN02442 125 VVKELPKLLSDNFDQ---LDTSRASIFGHSMGGHGALTIYLKN---PD-------KYKSVSAFAPIANPI 181 (283)
T ss_pred HHHHHHHHHHHHHHh---cCCCceEEEEEChhHHHHHHHHHhC---ch-------hEEEEEEECCccCcc
Confidence 344555566665543 3345799999999998776666531 11 378899999987754
No 60
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=96.42 E-value=0.025 Score=52.17 Aligned_cols=105 Identities=20% Similarity=0.246 Sum_probs=66.0
Q ss_pred CCEEEEECCCCchHHHhHHHHhhCceEEeccCCCCCCCcceeCCCCcccCCceEEEecCCccccccccCCCCcccCchHH
Q 012236 70 DPLLLWLTGGPGCSAFSALVYEIGPINFNILEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGFSYVRTPLASQTGDFKQ 149 (467)
Q Consensus 70 ~p~~lwlnGGPG~Ss~~g~~~E~GP~~~~~~~~~~~~~~~~~n~~sW~~~an~l~iDqPvG~GfS~~~~~~~~~~~~~~~ 149 (467)
.|.+++++|+|+++.......+..+ .... + .+++.+|+| |.|.|. .. . ......
T Consensus 21 ~~~i~~~hg~~~~~~~~~~~~~~~~----------------~~~~---~-~~~~~~d~~-g~g~s~-~~--~--~~~~~~ 74 (282)
T COG0596 21 GPPLVLLHGFPGSSSVWRPVFKVLP----------------ALAA---R-YRVIAPDLR-GHGRSD-PA--G--YSLSAY 74 (282)
T ss_pred CCeEEEeCCCCCchhhhHHHHHHhh----------------cccc---c-eEEEEeccc-CCCCCC-cc--c--ccHHHH
Confidence 6699999999999988765211110 0111 1 899999999 999996 11 0 111122
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEeEecCCccCc
Q 012236 150 VHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGYILGNPKTDK 217 (467)
Q Consensus 150 a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~iGng~i~p 217 (467)
++++..++. ... ..++++.|+|+||..+-.+|.+..+ .++++++.++...+
T Consensus 75 ~~~~~~~~~----~~~---~~~~~l~G~S~Gg~~~~~~~~~~p~----------~~~~~v~~~~~~~~ 125 (282)
T COG0596 75 ADDLAALLD----ALG---LEKVVLVGHSMGGAVALALALRHPD----------RVRGLVLIGPAPPP 125 (282)
T ss_pred HHHHHHHHH----HhC---CCceEEEEecccHHHHHHHHHhcch----------hhheeeEecCCCCc
Confidence 444444444 322 2349999999998777666655433 46777777766553
No 61
>PRK10566 esterase; Provisional
Probab=96.40 E-value=0.018 Score=54.50 Aligned_cols=62 Identities=19% Similarity=0.170 Sum_probs=47.0
Q ss_pred CCeEEEEcCCCccccCchhHHHHHHhcCCCCccCccceeeCCeeeeEEEEEecceEEEEEcCCcccccCCChHHHHHHHH
Q 012236 380 GYRSLIYSGDHDMVVPFLGTEAWIKSLNYSIIDDWRPWILHSQVAGYTRTYSNRMTYATVKGGGHIAPEYRPAECYAMFQ 459 (467)
Q Consensus 380 ~irVLiY~Gd~D~i~n~~Gt~~wi~~L~w~~~~~~~~w~~~~~~aG~~k~~~~~Ltf~~V~~AGHmvP~DqP~~a~~m~~ 459 (467)
..++|+.+|..|.+++...++++.+.++=.+. +.+++++++.++||... | .+++-+.
T Consensus 186 ~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~-------------------~~~~~~~~~~~~~H~~~---~-~~~~~~~ 242 (249)
T PRK10566 186 DRPLLLWHGLADDVVPAAESLRLQQALRERGL-------------------DKNLTCLWEPGVRHRIT---P-EALDAGV 242 (249)
T ss_pred CCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCC-------------------CcceEEEecCCCCCccC---H-HHHHHHH
Confidence 46999999999999999988888777642111 12488999999999974 3 4567777
Q ss_pred HHHcC
Q 012236 460 RWINH 464 (467)
Q Consensus 460 ~fl~~ 464 (467)
+||..
T Consensus 243 ~fl~~ 247 (249)
T PRK10566 243 AFFRQ 247 (249)
T ss_pred HHHHh
Confidence 77764
No 62
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=96.01 E-value=0.012 Score=54.22 Aligned_cols=56 Identities=25% Similarity=0.301 Sum_probs=46.9
Q ss_pred cCCeEEEEcCCCccccCchhHHHHHHhcCCCCccCccceeeCCeeeeEEEEEecceEEEEEcCCcccccCCChHHHHHHH
Q 012236 379 KGYRSLIYSGDHDMVVPFLGTEAWIKSLNYSIIDDWRPWILHSQVAGYTRTYSNRMTYATVKGGGHIAPEYRPAECYAMF 458 (467)
Q Consensus 379 ~~irVLiY~Gd~D~i~n~~Gt~~wi~~L~w~~~~~~~~w~~~~~~aG~~k~~~~~Ltf~~V~~AGHmvP~DqP~~a~~m~ 458 (467)
-.+++|+.+|..|.+++....+...+.+. +-.++.+.++||....+.|+..-+++
T Consensus 174 i~~p~l~i~~~~D~~~p~~~~~~~~~~~~-------------------------~~~~~~~~~~GH~~~~~~~~~~~~~i 228 (230)
T PF00561_consen 174 IKVPTLIIWGEDDPLVPPESSEQLAKLIP-------------------------NSQLVLIEGSGHFAFLEGPDEFNEII 228 (230)
T ss_dssp TTSEEEEEEETTCSSSHHHHHHHHHHHST-------------------------TEEEEEETTCCSTHHHHSHHHHHHHH
T ss_pred cCCCeEEEEeCCCCCCCHHHHHHHHHhcC-------------------------CCEEEECCCCChHHHhcCHHhhhhhh
Confidence 47999999999999999988877544422 36678999999999999999988887
Q ss_pred H
Q 012236 459 Q 459 (467)
Q Consensus 459 ~ 459 (467)
.
T Consensus 229 ~ 229 (230)
T PF00561_consen 229 I 229 (230)
T ss_dssp H
T ss_pred c
Confidence 5
No 63
>PRK10985 putative hydrolase; Provisional
Probab=95.97 E-value=0.12 Score=51.25 Aligned_cols=46 Identities=20% Similarity=0.153 Sum_probs=34.6
Q ss_pred CCeEEEEcCCCccccCchhHHHHHHhcCCCCccCccceeeCCeeeeEEEEEecceEEEEEcCCcccccCCC
Q 012236 380 GYRSLIYSGDHDMVVPFLGTEAWIKSLNYSIIDDWRPWILHSQVAGYTRTYSNRMTYATVKGGGHIAPEYR 450 (467)
Q Consensus 380 ~irVLiY~Gd~D~i~n~~Gt~~wi~~L~w~~~~~~~~w~~~~~~aG~~k~~~~~Ltf~~V~~AGHmvP~Dq 450 (467)
.+++|+.+|+.|.+++....+.. .++ . .+.+++.+.++||+.+.+.
T Consensus 255 ~~P~lii~g~~D~~~~~~~~~~~-~~~-----------------------~-~~~~~~~~~~~GH~~~~~g 300 (324)
T PRK10985 255 RKPTLIIHAKDDPFMTHEVIPKP-ESL-----------------------P-PNVEYQLTEHGGHVGFVGG 300 (324)
T ss_pred CCCEEEEecCCCCCCChhhChHH-HHh-----------------------C-CCeEEEECCCCCceeeCCC
Confidence 68999999999999986654432 111 1 2578889999999988764
No 64
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=95.95 E-value=0.1 Score=50.55 Aligned_cols=78 Identities=15% Similarity=0.112 Sum_probs=54.5
Q ss_pred CceEEEecCCccccccccCCCCcccCchHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCC
Q 012236 120 ASILFVDSPVGTGFSYVRTPLASQTGDFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGI 199 (467)
Q Consensus 120 an~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~ 199 (467)
.+++-+|.| |.|-|.... .+.++..+|+.++++.+-+..|.+ .++++.|+|.||..+-.+|.. .
T Consensus 58 ~~v~~~Dl~-G~G~S~~~~-----~~~~~~~~d~~~~~~~l~~~~~g~--~~i~l~G~S~Gg~~a~~~a~~----~---- 121 (274)
T TIGR03100 58 FPVLRFDYR-GMGDSEGEN-----LGFEGIDADIAAAIDAFREAAPHL--RRIVAWGLCDAASAALLYAPA----D---- 121 (274)
T ss_pred CEEEEeCCC-CCCCCCCCC-----CCHHHHHHHHHHHHHHHHhhCCCC--CcEEEEEECHHHHHHHHHhhh----C----
Confidence 689999998 988875431 133456677777777665555544 369999999999765555421 1
Q ss_pred CCceeeeEeEecCCccC
Q 012236 200 KPLINLQGYILGNPKTD 216 (467)
Q Consensus 200 ~~~inLkGi~iGng~i~ 216 (467)
-.++|+++.||++.
T Consensus 122 ---~~v~~lil~~p~~~ 135 (274)
T TIGR03100 122 ---LRVAGLVLLNPWVR 135 (274)
T ss_pred ---CCccEEEEECCccC
Confidence 14899999999864
No 65
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=95.62 E-value=0.019 Score=55.74 Aligned_cols=82 Identities=12% Similarity=0.081 Sum_probs=52.8
Q ss_pred cCCceEEEecCCccccccccCCCCcccCchHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhccc
Q 012236 118 KEASILFVDSPVGTGFSYVRTPLASQTGDFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEE 197 (467)
Q Consensus 118 ~~an~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~ 197 (467)
...|++.||-+-+ +...-. .-..+...+++++..+|+...+.. .+...+++|.|+|.||+.+-.+|.+.-+
T Consensus 65 ~~~nVi~vD~~~~---~~~~y~-~a~~~~~~v~~~la~~l~~L~~~~-g~~~~~i~lIGhSlGa~vAg~~a~~~~~---- 135 (275)
T cd00707 65 GDYNVIVVDWGRG---ANPNYP-QAVNNTRVVGAELAKFLDFLVDNT-GLSLENVHLIGHSLGAHVAGFAGKRLNG---- 135 (275)
T ss_pred CCCEEEEEECccc---cccChH-HHHHhHHHHHHHHHHHHHHHHHhc-CCChHHEEEEEecHHHHHHHHHHHHhcC----
Confidence 3479999998733 211100 001234456777777777665543 2334589999999999999888876522
Q ss_pred CCCCceeeeEeEecCCc
Q 012236 198 GIKPLINLQGYILGNPK 214 (467)
Q Consensus 198 ~~~~~inLkGi~iGng~ 214 (467)
+++.|+..+|.
T Consensus 136 ------~v~~iv~LDPa 146 (275)
T cd00707 136 ------KLGRITGLDPA 146 (275)
T ss_pred ------ccceeEEecCC
Confidence 37788877765
No 66
>PRK10115 protease 2; Provisional
Probab=95.52 E-value=0.059 Score=59.14 Aligned_cols=130 Identities=15% Similarity=0.086 Sum_probs=72.1
Q ss_pred CCceEEEEEEecCC--CCCCCCEEEEECCCCchHHHh------HHHHhhCceEEeccCCCCCCCcceeCCCCcccCCceE
Q 012236 52 EDAQLFYYFVKSEK--NPKEDPLLLWLTGGPGCSAFS------ALVYEIGPINFNILEYNGSLPTLHLNPYSWTKEASIL 123 (467)
Q Consensus 52 ~~~~lfy~f~es~~--~~~~~p~~lwlnGGPG~Ss~~------g~~~E~GP~~~~~~~~~~~~~~~~~n~~sW~~~an~l 123 (467)
.+..+-.|++-.+. .....|+||+.+||||.|... ..|.+-|=..
T Consensus 425 DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v--------------------------- 477 (686)
T PRK10115 425 DGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVY--------------------------- 477 (686)
T ss_pred CCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEE---------------------------
Confidence 35667766554221 234569999999999998432 3344333322
Q ss_pred EEecCCcc-ccccccCCCCcccCchHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCc
Q 012236 124 FVDSPVGT-GFSYVRTPLASQTGDFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPL 202 (467)
Q Consensus 124 ~iDqPvG~-GfS~~~~~~~~~~~~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~ 202 (467)
.+=.+-|- ||...-...+.-..-...-+|+.+......+. .--....+.|.|-||||..+-.++. +..+
T Consensus 478 ~~~n~RGs~g~G~~w~~~g~~~~k~~~~~D~~a~~~~Lv~~-g~~d~~rl~i~G~S~GG~l~~~~~~---~~Pd------ 547 (686)
T PRK10115 478 AIVHVRGGGELGQQWYEDGKFLKKKNTFNDYLDACDALLKL-GYGSPSLCYGMGGSAGGMLMGVAIN---QRPE------ 547 (686)
T ss_pred EEEEcCCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHc-CCCChHHeEEEEECHHHHHHHHHHh---cChh------
Confidence 22223332 33321100000001113445666666544433 3233467999999999985544442 2222
Q ss_pred eeeeEeEecCCccCccc
Q 012236 203 INLQGYILGNPKTDKIV 219 (467)
Q Consensus 203 inLkGi~iGng~i~p~~ 219 (467)
-++.++.+.|++|...
T Consensus 548 -lf~A~v~~vp~~D~~~ 563 (686)
T PRK10115 548 -LFHGVIAQVPFVDVVT 563 (686)
T ss_pred -heeEEEecCCchhHhh
Confidence 4899999999999863
No 67
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=95.17 E-value=0.079 Score=52.62 Aligned_cols=131 Identities=16% Similarity=0.226 Sum_probs=83.3
Q ss_pred CceEEEEEEecCCC-C-CCCCEEEEECCCCchHHHh------HHHHhhCceEEeccCCCCCCCcceeCCCCcccCCceEE
Q 012236 53 DAQLFYYFVKSEKN-P-KEDPLLLWLTGGPGCSAFS------ALVYEIGPINFNILEYNGSLPTLHLNPYSWTKEASILF 124 (467)
Q Consensus 53 ~~~lfy~f~es~~~-~-~~~p~~lwlnGGPG~Ss~~------g~~~E~GP~~~~~~~~~~~~~~~~~n~~sW~~~an~l~ 124 (467)
...++.+.|..... + +.+|++||++||=-|-+.. .++.++ -+.+|.+-
T Consensus 71 ~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~------------------------a~~~~~vv 126 (336)
T KOG1515|consen 71 FTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANSPAYDSFCTRL------------------------AAELNCVV 126 (336)
T ss_pred CCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCCCchhHHHHHHH------------------------HHHcCeEE
Confidence 57799998876543 3 5899999999996554321 111111 13445553
Q ss_pred EecCCccccccccCCCCcccCchHHHHHHHHHHHH-HHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCce
Q 012236 125 VDSPVGTGFSYVRTPLASQTGDFKQVHQVDQFLRK-WLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLI 203 (467)
Q Consensus 125 iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fL~~-F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~i 203 (467)
| .++|=-+. ...++..-++.=+.+..++++ |....-... .++|+|.|=||-.+-.+|.++.+.. ..++
T Consensus 127 v----SVdYRLAP-Eh~~Pa~y~D~~~Al~w~~~~~~~~~~~D~~--rv~l~GDSaGGNia~~va~r~~~~~----~~~~ 195 (336)
T KOG1515|consen 127 V----SVDYRLAP-EHPFPAAYDDGWAALKWVLKNSWLKLGADPS--RVFLAGDSAGGNIAHVVAQRAADEK----LSKP 195 (336)
T ss_pred E----ecCcccCC-CCCCCccchHHHHHHHHHHHhHHHHhCCCcc--cEEEEccCccHHHHHHHHHHHhhcc----CCCc
Confidence 3 44555443 233443333333344455554 665544332 3999999999999999999998853 1257
Q ss_pred eeeEeEecCCccCcc
Q 012236 204 NLQGYILGNPKTDKI 218 (467)
Q Consensus 204 nLkGi~iGng~i~p~ 218 (467)
.|+|+++--|+....
T Consensus 196 ki~g~ili~P~~~~~ 210 (336)
T KOG1515|consen 196 KIKGQILIYPFFQGT 210 (336)
T ss_pred ceEEEEEEecccCCC
Confidence 899999998887654
No 68
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=95.09 E-value=0.055 Score=57.93 Aligned_cols=129 Identities=16% Similarity=0.134 Sum_probs=76.9
Q ss_pred CceEEEEEEecCCCCCCCCEEEEECCCCchHHHhHHHHhhCceEEeccCCCCCCCcceeCCCCcc-cCCceEEEecCCcc
Q 012236 53 DAQLFYYFVKSEKNPKEDPLLLWLTGGPGCSAFSALVYEIGPINFNILEYNGSLPTLHLNPYSWT-KEASILFVDSPVGT 131 (467)
Q Consensus 53 ~~~lfy~f~es~~~~~~~p~~lwlnGGPG~Ss~~g~~~E~GP~~~~~~~~~~~~~~~~~n~~sW~-~~an~l~iDqPvG~ 131 (467)
+.+|+..++..+. .+..|+||.++|--..+.... +. . . ....-|. +-..++-+|.+ |.
T Consensus 6 G~~L~~~~~~P~~-~~~~P~Il~~~gyg~~~~~~~-----~~---~----------~-~~~~~l~~~Gy~vv~~D~R-G~ 64 (550)
T TIGR00976 6 GTRLAIDVYRPAG-GGPVPVILSRTPYGKDAGLRW-----GL---D----------K-TEPAWFVAQGYAVVIQDTR-GR 64 (550)
T ss_pred CCEEEEEEEecCC-CCCCCEEEEecCCCCchhhcc-----cc---c----------c-ccHHHHHhCCcEEEEEecc-cc
Confidence 5678876664432 346799999986543222100 00 0 0 0001122 24689999977 99
Q ss_pred ccccccCCCCcccCchHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEeEec
Q 012236 132 GFSYVRTPLASQTGDFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGYILG 211 (467)
Q Consensus 132 GfS~~~~~~~~~~~~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~iG 211 (467)
|.|-+.... .+ .+.++|+.+++. |+.+.| +.+.++.++|.||||...-.+|.. .. -.|++|+..
T Consensus 65 g~S~g~~~~---~~-~~~~~D~~~~i~-~l~~q~-~~~~~v~~~G~S~GG~~a~~~a~~---~~-------~~l~aiv~~ 128 (550)
T TIGR00976 65 GASEGEFDL---LG-SDEAADGYDLVD-WIAKQP-WCDGNVGMLGVSYLAVTQLLAAVL---QP-------PALRAIAPQ 128 (550)
T ss_pred ccCCCceEe---cC-cccchHHHHHHH-HHHhCC-CCCCcEEEEEeChHHHHHHHHhcc---CC-------CceeEEeec
Confidence 999754221 11 345666666665 555555 334689999999999765555532 11 258999998
Q ss_pred CCccCcc
Q 012236 212 NPKTDKI 218 (467)
Q Consensus 212 ng~i~p~ 218 (467)
+++.|..
T Consensus 129 ~~~~d~~ 135 (550)
T TIGR00976 129 EGVWDLY 135 (550)
T ss_pred Ccccchh
Confidence 8887643
No 69
>PLN00021 chlorophyllase
Probab=95.04 E-value=0.47 Score=46.87 Aligned_cols=122 Identities=18% Similarity=0.129 Sum_probs=69.8
Q ss_pred EEEecCCCCCCCCEEEEECCCCchHHHhHHHHhhCceEEeccCCCCCCCcceeCCCCcccCCceEEEecCCccccccccC
Q 012236 59 YFVKSEKNPKEDPLLLWLTGGPGCSAFSALVYEIGPINFNILEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGFSYVRT 138 (467)
Q Consensus 59 ~f~es~~~~~~~p~~lwlnGGPG~Ss~~g~~~E~GP~~~~~~~~~~~~~~~~~n~~sW~~~an~l~iDqPvG~GfS~~~~ 138 (467)
.+.++. ..+.|+|||++|+.+.+..+..+.+. +. +| -..++.+|.+ |++....
T Consensus 43 v~~P~~--~g~~PvVv~lHG~~~~~~~y~~l~~~----------------La----s~--G~~VvapD~~---g~~~~~~ 95 (313)
T PLN00021 43 VATPSE--AGTYPVLLFLHGYLLYNSFYSQLLQH----------------IA----SH--GFIVVAPQLY---TLAGPDG 95 (313)
T ss_pred EEeCCC--CCCCCEEEEECCCCCCcccHHHHHHH----------------HH----hC--CCEEEEecCC---CcCCCCc
Confidence 444432 35689999999997765544322211 10 11 1355666655 2322111
Q ss_pred CCCcccCchHHHHHHHHHHHHHHHH-CC---CCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEeEecCCc
Q 012236 139 PLASQTGDFKQVHQVDQFLRKWLMD-HP---EFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGYILGNPK 214 (467)
Q Consensus 139 ~~~~~~~~~~~a~~~~~fL~~F~~~-fp---~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~iGng~ 214 (467)
..+.+.+.++..++.+.++. .| +....+++|+|+|.||+.+-.+|.+..+.. ....+++++..+++
T Consensus 96 -----~~~i~d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~-----~~~~v~ali~ldPv 165 (313)
T PLN00021 96 -----TDEIKDAAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVS-----LPLKFSALIGLDPV 165 (313)
T ss_pred -----hhhHHHHHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccc-----cccceeeEEeeccc
Confidence 12223456666777654432 12 233357999999999998888886543321 12458899888887
Q ss_pred cCc
Q 012236 215 TDK 217 (467)
Q Consensus 215 i~p 217 (467)
...
T Consensus 166 ~g~ 168 (313)
T PLN00021 166 DGT 168 (313)
T ss_pred ccc
Confidence 543
No 70
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=95.03 E-value=0.48 Score=43.50 Aligned_cols=123 Identities=20% Similarity=0.197 Sum_probs=82.5
Q ss_pred CceEEEEEEecCCCCCCCCEEEEECCCCchHHHhHHHHhhCceEEeccCCCCCCCcceeCCCCcccCCceEEEecCCccc
Q 012236 53 DAQLFYYFVKSEKNPKEDPLLLWLTGGPGCSAFSALVYEIGPINFNILEYNGSLPTLHLNPYSWTKEASILFVDSPVGTG 132 (467)
Q Consensus 53 ~~~lfy~f~es~~~~~~~p~~lwlnGGPG~Ss~~g~~~E~GP~~~~~~~~~~~~~~~~~n~~sW~~~an~l~iDqPvG~G 132 (467)
.-.|.=|...+++ ++|++|.++|--|- .|.+. ..... .. =+-..||+-||-- |.|
T Consensus 64 ~vtL~a~~~~~E~---S~pTlLyfh~NAGN---mGhr~------~i~~~-------fy-----~~l~mnv~ivsYR-GYG 118 (300)
T KOG4391|consen 64 KVTLDAYLMLSES---SRPTLLYFHANAGN---MGHRL------PIARV-------FY-----VNLKMNVLIVSYR-GYG 118 (300)
T ss_pred ceeEeeeeecccC---CCceEEEEccCCCc---ccchh------hHHHH-------HH-----HHcCceEEEEEee-ccc
Confidence 3456666555443 78999999977653 12222 11000 00 0345799999966 999
Q ss_pred cccccCCCCcccCchHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEeEecC
Q 012236 133 FSYVRTPLASQTGDFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGYILGN 212 (467)
Q Consensus 133 fS~~~~~~~~~~~~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~iGn 212 (467)
-|.+.....--..|.+++- .++...|.+.+.+++++|.|-||--+-++|++-.+ .+.++++-|
T Consensus 119 ~S~GspsE~GL~lDs~avl-------dyl~t~~~~dktkivlfGrSlGGAvai~lask~~~----------ri~~~ivEN 181 (300)
T KOG4391|consen 119 KSEGSPSEEGLKLDSEAVL-------DYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSD----------RISAIIVEN 181 (300)
T ss_pred cCCCCccccceeccHHHHH-------HHHhcCccCCcceEEEEecccCCeeEEEeeccchh----------heeeeeeec
Confidence 9988765422234444432 34467888999999999999999999988876443 489999999
Q ss_pred CccCc
Q 012236 213 PKTDK 217 (467)
Q Consensus 213 g~i~p 217 (467)
-+++-
T Consensus 182 TF~SI 186 (300)
T KOG4391|consen 182 TFLSI 186 (300)
T ss_pred hhccc
Confidence 98874
No 71
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=94.87 E-value=0.19 Score=47.79 Aligned_cols=107 Identities=23% Similarity=0.313 Sum_probs=72.7
Q ss_pred CCCCCEEEEECCCCchHHHh-HHHH-hhCceEEeccCCCCCCCcceeCCCCcccCCceEEEecCCccccccccCCCCccc
Q 012236 67 PKEDPLLLWLTGGPGCSAFS-ALVY-EIGPINFNILEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGFSYVRTPLASQT 144 (467)
Q Consensus 67 ~~~~p~~lwlnGGPG~Ss~~-g~~~-E~GP~~~~~~~~~~~~~~~~~n~~sW~~~an~l~iDqPvG~GfS~~~~~~~~~~ 144 (467)
.+.-|+++.++|| |.|.|. +.|. |+ .. .-..-++-+| --|.|=+..++..+ -
T Consensus 71 ~t~gpil~l~HG~-G~S~LSfA~~a~el-----------------~s-----~~~~r~~a~D-lRgHGeTk~~~e~d--l 124 (343)
T KOG2564|consen 71 ATEGPILLLLHGG-GSSALSFAIFASEL-----------------KS-----KIRCRCLALD-LRGHGETKVENEDD--L 124 (343)
T ss_pred CCCccEEEEeecC-cccchhHHHHHHHH-----------------Hh-----hcceeEEEee-ccccCccccCChhh--c
Confidence 4567999999998 777764 4443 11 10 0112237789 45999888776655 3
Q ss_pred CchHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEeEecC
Q 012236 145 GDFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGYILGN 212 (467)
Q Consensus 145 ~~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~iGn 212 (467)
+.+..++|+...++++|..-| -+++|.|+|-||-...+.|.. + .--+|-|+.+.+
T Consensus 125 S~eT~~KD~~~~i~~~fge~~----~~iilVGHSmGGaIav~~a~~----k-----~lpsl~Gl~viD 179 (343)
T KOG2564|consen 125 SLETMSKDFGAVIKELFGELP----PQIILVGHSMGGAIAVHTAAS----K-----TLPSLAGLVVID 179 (343)
T ss_pred CHHHHHHHHHHHHHHHhccCC----CceEEEeccccchhhhhhhhh----h-----hchhhhceEEEE
Confidence 677899999999998885443 269999999999887666542 1 122477777654
No 72
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=94.80 E-value=0.094 Score=54.02 Aligned_cols=81 Identities=11% Similarity=0.003 Sum_probs=52.2
Q ss_pred CCceEEEecCCccccccccCCCCcccCchHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccC
Q 012236 119 EASILFVDSPVGTGFSYVRTPLASQTGDFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEG 198 (467)
Q Consensus 119 ~an~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~ 198 (467)
..|+|-||-| |-|-|. -... ..+...+|+++.++|+...+.. .+.-.+++|.|+|.|||-+-.+|.+.-
T Consensus 73 d~nVI~VDw~-g~g~s~--y~~a-~~~t~~vg~~la~lI~~L~~~~-gl~l~~VhLIGHSLGAhIAg~ag~~~p------ 141 (442)
T TIGR03230 73 SANVIVVDWL-SRAQQH--YPTS-AAYTKLVGKDVAKFVNWMQEEF-NYPWDNVHLLGYSLGAHVAGIAGSLTK------ 141 (442)
T ss_pred CCEEEEEECC-CcCCCC--Cccc-cccHHHHHHHHHHHHHHHHHhh-CCCCCcEEEEEECHHHHHHHHHHHhCC------
Confidence 4799999998 444331 1111 1233567777777776554333 244568999999999998887775321
Q ss_pred CCCceeeeEeEecCCc
Q 012236 199 IKPLINLQGYILGNPK 214 (467)
Q Consensus 199 ~~~~inLkGi~iGng~ 214 (467)
-.+.+|.+.||.
T Consensus 142 ----~rV~rItgLDPA 153 (442)
T TIGR03230 142 ----HKVNRITGLDPA 153 (442)
T ss_pred ----cceeEEEEEcCC
Confidence 136778877773
No 73
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=94.54 E-value=0.023 Score=52.53 Aligned_cols=90 Identities=12% Similarity=0.061 Sum_probs=60.0
Q ss_pred CCceEEEecCCccccccccCCCCcccCchHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccC
Q 012236 119 EASILFVDSPVGTGFSYVRTPLASQTGDFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEG 198 (467)
Q Consensus 119 ~an~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~ 198 (467)
=..++.+|..-+.||+..-........-....+|+.++++...+.. ......+.|+|.||||+.+-.++.+ ..
T Consensus 14 Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~-~iD~~ri~i~G~S~GG~~a~~~~~~---~~--- 86 (213)
T PF00326_consen 14 GYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQY-YIDPDRIGIMGHSYGGYLALLAATQ---HP--- 86 (213)
T ss_dssp T-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTT-SEEEEEEEEEEETHHHHHHHHHHHH---TC---
T ss_pred CEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccc-cccceeEEEEcccccccccchhhcc---cc---
Confidence 3578999999777777642221111223456778888887765554 4455689999999999998877762 21
Q ss_pred CCCceeeeEeEecCCccCccc
Q 012236 199 IKPLINLQGYILGNPKTDKIV 219 (467)
Q Consensus 199 ~~~~inLkGi~iGng~i~p~~ 219 (467)
-.++.++.++|.+|+..
T Consensus 87 ----~~f~a~v~~~g~~d~~~ 103 (213)
T PF00326_consen 87 ----DRFKAAVAGAGVSDLFS 103 (213)
T ss_dssp ----CGSSEEEEESE-SSTTC
T ss_pred ----eeeeeeeccceecchhc
Confidence 13789999999998764
No 74
>PRK10162 acetyl esterase; Provisional
Probab=94.51 E-value=0.13 Score=50.95 Aligned_cols=62 Identities=11% Similarity=0.003 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEeEecCCccCc
Q 012236 151 HQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGYILGNPKTDK 217 (467)
Q Consensus 151 ~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~iGng~i~p 217 (467)
.+.++++.+.-+.+- ....+++|+|+|.||+.+-.++.+..+... ....++|+++..|+++.
T Consensus 136 ~~a~~~l~~~~~~~~-~d~~~i~l~G~SaGG~la~~~a~~~~~~~~----~~~~~~~~vl~~p~~~~ 197 (318)
T PRK10162 136 VAVCCYFHQHAEDYG-INMSRIGFAGDSAGAMLALASALWLRDKQI----DCGKVAGVLLWYGLYGL 197 (318)
T ss_pred HHHHHHHHHhHHHhC-CChhHEEEEEECHHHHHHHHHHHHHHhcCC----CccChhheEEECCccCC
Confidence 344555554444332 234579999999999999999877655321 12357888888888764
No 75
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=94.41 E-value=0.086 Score=52.94 Aligned_cols=63 Identities=19% Similarity=0.195 Sum_probs=50.0
Q ss_pred CCeEEEEcCCCccccCchhHHHHHHhcCCCCccCccceeeCCeeeeEEEEEecceEEEEEc-CCcccccCCChHHHHHHH
Q 012236 380 GYRSLIYSGDHDMVVPFLGTEAWIKSLNYSIIDDWRPWILHSQVAGYTRTYSNRMTYATVK-GGGHIAPEYRPAECYAMF 458 (467)
Q Consensus 380 ~irVLiY~Gd~D~i~n~~Gt~~wi~~L~w~~~~~~~~w~~~~~~aG~~k~~~~~Ltf~~V~-~AGHmvP~DqP~~a~~m~ 458 (467)
.++||+..|+.|.+++....+...+.+. ...-..+|+.|. +|||+++.++|+...+.+
T Consensus 288 ~~P~Lvi~G~~D~~~p~~~~~~~a~~i~---------------------~~~~~v~~~~i~~~~GH~~~le~p~~~~~~l 346 (351)
T TIGR01392 288 KAPFLVVSITSDWLFPPAESRELAKALP---------------------AAGLRVTYVEIESPYGHDAFLVETDQVEELI 346 (351)
T ss_pred CCCEEEEEeCCccccCHHHHHHHHHHHh---------------------hcCCceEEEEeCCCCCcchhhcCHHHHHHHH
Confidence 6899999999999999988777665543 011114566675 899999999999999999
Q ss_pred HHHHc
Q 012236 459 QRWIN 463 (467)
Q Consensus 459 ~~fl~ 463 (467)
.+|++
T Consensus 347 ~~FL~ 351 (351)
T TIGR01392 347 RGFLR 351 (351)
T ss_pred HHHhC
Confidence 99984
No 76
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=94.35 E-value=0.023 Score=57.55 Aligned_cols=80 Identities=19% Similarity=0.187 Sum_probs=52.3
Q ss_pred CceEEEecCCccccccccCCCCcccCchHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCC
Q 012236 120 ASILFVDSPVGTGFSYVRTPLASQTGDFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGI 199 (467)
Q Consensus 120 an~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~ 199 (467)
-+||=||-| |||+|.... +. . ..+.++..+..++..-|+.-...+.++|-|+||.|++.+|.. +.+
T Consensus 219 iA~LtvDmP-G~G~s~~~~---l~-~---D~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~l--e~~---- 284 (411)
T PF06500_consen 219 IAMLTVDMP-GQGESPKWP---LT-Q---DSSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAAL--EDP---- 284 (411)
T ss_dssp -EEEEE--T-TSGGGTTT----S--S----CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHH--TTT----
T ss_pred CEEEEEccC-CCcccccCC---CC-c---CHHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHh--ccc----
Confidence 479999999 999985322 11 1 123366667777788899888899999999999999999853 111
Q ss_pred CCceeeeEeEecCCccCc
Q 012236 200 KPLINLQGYILGNPKTDK 217 (467)
Q Consensus 200 ~~~inLkGi~iGng~i~p 217 (467)
.||+++.-.|.++-
T Consensus 285 ----RlkavV~~Ga~vh~ 298 (411)
T PF06500_consen 285 ----RLKAVVALGAPVHH 298 (411)
T ss_dssp ----T-SEEEEES---SC
T ss_pred ----ceeeEeeeCchHhh
Confidence 38887766665543
No 77
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=94.04 E-value=0.13 Score=52.37 Aligned_cols=65 Identities=12% Similarity=0.143 Sum_probs=52.4
Q ss_pred CCeEEEEcCCCccccCchhHHHHHHhcCCCCccCccceeeCCeeeeEEEEEecceEEEEEcC-CcccccCCChHHHHHHH
Q 012236 380 GYRSLIYSGDHDMVVPFLGTEAWIKSLNYSIIDDWRPWILHSQVAGYTRTYSNRMTYATVKG-GGHIAPEYRPAECYAMF 458 (467)
Q Consensus 380 ~irVLiY~Gd~D~i~n~~Gt~~wi~~L~w~~~~~~~~w~~~~~~aG~~k~~~~~Ltf~~V~~-AGHmvP~DqP~~a~~m~ 458 (467)
..+|||..|+.|.+++..-.+...+.+. ..+.+.++..|.+ +||+.+.++|+...+.+
T Consensus 323 ~~PtLvI~G~~D~l~p~~~~~~la~~lp---------------------~~~~~a~l~~I~s~~GH~~~le~p~~~~~~I 381 (389)
T PRK06765 323 EANVLMIPCKQDLLQPPRYNYKMVDILQ---------------------KQGKYAEVYEIESINGHMAGVFDIHLFEKKI 381 (389)
T ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHHhh---------------------hcCCCeEEEEECCCCCcchhhcCHHHHHHHH
Confidence 6899999999999999877666555432 0112477889985 99999999999999999
Q ss_pred HHHHcCC
Q 012236 459 QRWINHD 465 (467)
Q Consensus 459 ~~fl~~~ 465 (467)
.+|+..+
T Consensus 382 ~~FL~~~ 388 (389)
T PRK06765 382 YEFLNRK 388 (389)
T ss_pred HHHHccc
Confidence 9999753
No 78
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=93.68 E-value=0.1 Score=48.86 Aligned_cols=54 Identities=15% Similarity=0.210 Sum_probs=42.9
Q ss_pred CCeEEEEcCCCccccCchhHHHHHHhcCCCCccCccceeeCCeeeeEEEEEecceEEEEEcCCcccccCCChHHHHHHHH
Q 012236 380 GYRSLIYSGDHDMVVPFLGTEAWIKSLNYSIIDDWRPWILHSQVAGYTRTYSNRMTYATVKGGGHIAPEYRPAECYAMFQ 459 (467)
Q Consensus 380 ~irVLiY~Gd~D~i~n~~Gt~~wi~~L~w~~~~~~~~w~~~~~~aG~~k~~~~~Ltf~~V~~AGHmvP~DqP~~a~~m~~ 459 (467)
.++|++..|+.|.++.. ...+ . +.+++.|.+|||+++.++|++..+.|.
T Consensus 188 ~~P~lii~G~~D~~~~~-----~~~~------------------------~--~~~~~~i~~~gH~~~~e~p~~~~~~i~ 236 (242)
T PRK11126 188 TFPFYYLCGERDSKFQA-----LAQQ------------------------L--ALPLHVIPNAGHNAHRENPAAFAASLA 236 (242)
T ss_pred CCCeEEEEeCCcchHHH-----HHHH------------------------h--cCeEEEeCCCCCchhhhChHHHHHHHH
Confidence 68999999999975421 0000 1 367788999999999999999999999
Q ss_pred HHHcC
Q 012236 460 RWINH 464 (467)
Q Consensus 460 ~fl~~ 464 (467)
.|+..
T Consensus 237 ~fl~~ 241 (242)
T PRK11126 237 QILRL 241 (242)
T ss_pred HHHhh
Confidence 99864
No 79
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=93.60 E-value=0.99 Score=45.67 Aligned_cols=120 Identities=19% Similarity=0.227 Sum_probs=75.2
Q ss_pred EEEEEEecCC----CCCCCCEEEEECCCCchHHHh------HHHHhhCceEEeccCCCCCCCcceeCCCCcccCCceEEE
Q 012236 56 LFYYFVKSEK----NPKEDPLLLWLTGGPGCSAFS------ALVYEIGPINFNILEYNGSLPTLHLNPYSWTKEASILFV 125 (467)
Q Consensus 56 lfy~f~es~~----~~~~~p~~lwlnGGPG~Ss~~------g~~~E~GP~~~~~~~~~~~~~~~~~n~~sW~~~an~l~i 125 (467)
..=|+..... +..++|+||.+.|=.|.|... ....+.| ++.. |
T Consensus 107 ~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G-~r~V--------------------------V 159 (409)
T KOG1838|consen 107 TLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKG-YRVV--------------------------V 159 (409)
T ss_pred EEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCC-cEEE--------------------------E
Confidence 3336654432 246789999999999998754 3444555 3221 1
Q ss_pred ecCCccccccccCCCCcccCchHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCceee
Q 012236 126 DSPVGTGFSYVRTPLASQTGDFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINL 205 (467)
Q Consensus 126 DqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inL 205 (467)
=.+-|.|-|-.+++.-+.....+. +-++++---++|| ..++|.+|.|+||..+ ..++-+..+ +.+ =.
T Consensus 160 fN~RG~~g~~LtTpr~f~ag~t~D---l~~~v~~i~~~~P---~a~l~avG~S~Gg~iL---~nYLGE~g~---~~~-l~ 226 (409)
T KOG1838|consen 160 FNHRGLGGSKLTTPRLFTAGWTED---LREVVNHIKKRYP---QAPLFAVGFSMGGNIL---TNYLGEEGD---NTP-LI 226 (409)
T ss_pred ECCCCCCCCccCCCceeecCCHHH---HHHHHHHHHHhCC---CCceEEEEecchHHHH---HHHhhhccC---CCC-ce
Confidence 126798888877766555444333 4334433335888 5799999999999865 344444332 222 26
Q ss_pred eEeEecCCcc
Q 012236 206 QGYILGNPKT 215 (467)
Q Consensus 206 kGi~iGng~i 215 (467)
.|++|-|||=
T Consensus 227 ~a~~v~~Pwd 236 (409)
T KOG1838|consen 227 AAVAVCNPWD 236 (409)
T ss_pred eEEEEeccch
Confidence 8899999983
No 80
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=93.51 E-value=0.52 Score=47.25 Aligned_cols=127 Identities=13% Similarity=0.073 Sum_probs=72.5
Q ss_pred CceEEEEEEecCCCCCCCCEEEEECCCCchHHHhH--------HHHhh-CceEEeccCCCCCCCcceeCCCCcccCCceE
Q 012236 53 DAQLFYYFVKSEKNPKEDPLLLWLTGGPGCSAFSA--------LVYEI-GPINFNILEYNGSLPTLHLNPYSWTKEASIL 123 (467)
Q Consensus 53 ~~~lfy~f~es~~~~~~~p~~lwlnGGPG~Ss~~g--------~~~E~-GP~~~~~~~~~~~~~~~~~n~~sW~~~an~l 123 (467)
+.+++|.-+... +....|.||.++|=.|.+.... .+... ||- ..--.+...||
T Consensus 15 ~~~~~y~~~g~~-~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~-----------------~~l~~~~~~vi 76 (351)
T TIGR01392 15 DVRVAYETYGTL-NAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPG-----------------RAIDTDRYFVV 76 (351)
T ss_pred CceEEEEecccc-CCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCC-----------------CCcCCCceEEE
Confidence 567888755431 1234589999999888664321 11110 110 00012446899
Q ss_pred EEecCCc--cccccccC--CCC-------cccCchHHHHHHHHHHHHHHHHCCCCCCCC-eEEEeccCCccchHHHHHHH
Q 012236 124 FVDSPVG--TGFSYVRT--PLA-------SQTGDFKQVHQVDQFLRKWLMDHPEFLSNP-FYVGGDSYSGITVPPLVQQI 191 (467)
Q Consensus 124 ~iDqPvG--~GfS~~~~--~~~-------~~~~~~~~a~~~~~fL~~F~~~fp~~~~~~-~~i~GESYgG~yvP~lA~~i 191 (467)
-+|.| | .|-|-.++ ..+ ...+.++.++++.++++. . .-.+ ++|.|+|.||..+-.+|.+-
T Consensus 77 ~~D~~-G~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----l---~~~~~~~l~G~S~Gg~ia~~~a~~~ 148 (351)
T TIGR01392 77 CSNVL-GGCYGSTGPSSINPGGRPYGSDFPLITIRDDVKAQKLLLDH----L---GIEQIAAVVGGSMGGMQALEWAIDY 148 (351)
T ss_pred EecCC-CCCCCCCCCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHH----c---CCCCceEEEEECHHHHHHHHHHHHC
Confidence 99998 7 44332111 000 012445556666655543 2 2234 99999999998888887653
Q ss_pred HhhcccCCCCceeeeEeEecCCcc
Q 012236 192 SNENEEGIKPLINLQGYILGNPKT 215 (467)
Q Consensus 192 ~~~n~~~~~~~inLkGi~iGng~i 215 (467)
-+ .++++++.++..
T Consensus 149 p~----------~v~~lvl~~~~~ 162 (351)
T TIGR01392 149 PE----------RVRAIVVLATSA 162 (351)
T ss_pred hH----------hhheEEEEccCC
Confidence 22 378888888654
No 81
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=93.47 E-value=0.17 Score=43.03 Aligned_cols=96 Identities=21% Similarity=0.226 Sum_probs=61.5
Q ss_pred EEEEECCCCchHHHhHHHHhhCceEEeccCCCCCCCcceeCCCCcccCCceEEEecCCccccccccCCCCcccCchHHHH
Q 012236 72 LLLWLTGGPGCSAFSALVYEIGPINFNILEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGFSYVRTPLASQTGDFKQVH 151 (467)
Q Consensus 72 ~~lwlnGGPG~Ss~~g~~~E~GP~~~~~~~~~~~~~~~~~n~~sW~~~an~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~ 151 (467)
+||+++|+-|.+..+..+.+ .+. .+-.+++.+|.| |.|-+.. ...++
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~----~l~------------------~~G~~v~~~~~~-~~~~~~~----------~~~~~ 47 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAE----ALA------------------EQGYAVVAFDYP-GHGDSDG----------ADAVE 47 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHH----HHH------------------HTTEEEEEESCT-TSTTSHH----------SHHHH
T ss_pred CEEEECCCCCCHHHHHHHHH----HHH------------------HCCCEEEEEecC-CCCccch----------hHHHH
Confidence 68999999887776544443 111 113567888887 6665511 12334
Q ss_pred HHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEeEecCCccC
Q 012236 152 QVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGYILGNPKTD 216 (467)
Q Consensus 152 ~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~iGng~i~ 216 (467)
++++.+. ...+ ..++++|+|.|.||..+..++.+- -.++++++-+|+.+
T Consensus 48 ~~~~~~~---~~~~--~~~~i~l~G~S~Gg~~a~~~~~~~-----------~~v~~~v~~~~~~~ 96 (145)
T PF12695_consen 48 RVLADIR---AGYP--DPDRIILIGHSMGGAIAANLAARN-----------PRVKAVVLLSPYPD 96 (145)
T ss_dssp HHHHHHH---HHHC--TCCEEEEEEETHHHHHHHHHHHHS-----------TTESEEEEESESSG
T ss_pred HHHHHHH---hhcC--CCCcEEEEEEccCcHHHHHHhhhc-----------cceeEEEEecCccc
Confidence 4444433 3333 356899999999999888877632 14889999888644
No 82
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=93.30 E-value=0.71 Score=44.49 Aligned_cols=118 Identities=15% Similarity=0.205 Sum_probs=77.1
Q ss_pred CCEEEEECCCCchHHHhHHHHhhCceEEeccCCCCCCCcceeCCCCcccCCceEEEecCCccccccccCC-----CCccc
Q 012236 70 DPLLLWLTGGPGCSAFSALVYEIGPINFNILEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGFSYVRTP-----LASQT 144 (467)
Q Consensus 70 ~p~~lwlnGGPG~Ss~~g~~~E~GP~~~~~~~~~~~~~~~~~n~~sW~~~an~l~iDqPvG~GfS~~~~~-----~~~~~ 144 (467)
+++++|+-|=||.-..+--|.+. +..+- +....++=|... |+|..... +.-..
T Consensus 2 ~~li~~IPGNPGlv~fY~~Fl~~----------------L~~~l---~~~~~i~~ish~---Gh~~~~~~~~~~~~~~~~ 59 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFYEEFLSA----------------LYEKL---NPQFEILGISHA---GHSTSPSNSKFSPNGRLF 59 (266)
T ss_pred cEEEEEECCCCChHHHHHHHHHH----------------HHHhC---CCCCeeEEecCC---CCcCCcccccccCCCCcc
Confidence 58999999999999987655521 22111 345566666644 66654433 22235
Q ss_pred CchHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEeEecCCccCc
Q 012236 145 GDFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGYILGNPKTDK 217 (467)
Q Consensus 145 ~~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~iGng~i~p 217 (467)
+.++.-+.-.+||+++....+ -.+.+++|.|+|=|...+-.+.+++. ....+++++++.=|.+.-
T Consensus 60 sL~~QI~hk~~~i~~~~~~~~-~~~~~liLiGHSIGayi~levl~r~~-------~~~~~V~~~~lLfPTi~~ 124 (266)
T PF10230_consen 60 SLQDQIEHKIDFIKELIPQKN-KPNVKLILIGHSIGAYIALEVLKRLP-------DLKFRVKKVILLFPTIED 124 (266)
T ss_pred CHHHHHHHHHHHHHHHhhhhc-CCCCcEEEEeCcHHHHHHHHHHHhcc-------ccCCceeEEEEeCCcccc
Confidence 778888889999999887654 23678999999999865555544443 123567777766666543
No 83
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=92.94 E-value=0.4 Score=44.55 Aligned_cols=102 Identities=16% Similarity=0.252 Sum_probs=69.9
Q ss_pred EEEEECCCCchHHHhHHHHh-hCceEEeccCCCCCCCcceeCCCCcccCCceEEEecCCccccccccCCCCcccCchHHH
Q 012236 72 LLLWLTGGPGCSAFSALVYE-IGPINFNILEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGFSYVRTPLASQTGDFKQV 150 (467)
Q Consensus 72 ~~lwlnGGPG~Ss~~g~~~E-~GP~~~~~~~~~~~~~~~~~n~~sW~~~an~l~iDqPvG~GfS~~~~~~~~~~~~~~~a 150 (467)
.|+++.+|=|+++.+--+.. +++ . ..++..|+.| |-+ .......+-++.|
T Consensus 2 ~lf~~p~~gG~~~~y~~la~~l~~----------------------~-~~~v~~i~~~-~~~-----~~~~~~~si~~la 52 (229)
T PF00975_consen 2 PLFCFPPAGGSASSYRPLARALPD----------------------D-VIGVYGIEYP-GRG-----DDEPPPDSIEELA 52 (229)
T ss_dssp EEEEESSTTCSGGGGHHHHHHHTT----------------------T-EEEEEEECST-TSC-----TTSHEESSHHHHH
T ss_pred eEEEEcCCccCHHHHHHHHHhCCC----------------------C-eEEEEEEecC-CCC-----CCCCCCCCHHHHH
Confidence 57788888776666533331 111 0 3568889988 444 1122345778888
Q ss_pred HHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEeEecCCcc
Q 012236 151 HQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGYILGNPKT 215 (467)
Q Consensus 151 ~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~iGng~i 215 (467)
+...+.|+. ..|+ -|++|+|.|+||..+=.+|.++.++. .....|++.|+..
T Consensus 53 ~~y~~~I~~---~~~~---gp~~L~G~S~Gg~lA~E~A~~Le~~G-------~~v~~l~liD~~~ 104 (229)
T PF00975_consen 53 SRYAEAIRA---RQPE---GPYVLAGWSFGGILAFEMARQLEEAG-------EEVSRLILIDSPP 104 (229)
T ss_dssp HHHHHHHHH---HTSS---SSEEEEEETHHHHHHHHHHHHHHHTT--------SESEEEEESCSS
T ss_pred HHHHHHhhh---hCCC---CCeeehccCccHHHHHHHHHHHHHhh-------hccCceEEecCCC
Confidence 887777764 4552 39999999999999999999887764 3578899888653
No 84
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=92.77 E-value=0.2 Score=45.38 Aligned_cols=51 Identities=24% Similarity=0.334 Sum_probs=40.2
Q ss_pred CCeEEEEcCCCccccCchhHHHHHHhcCCCCccCccceeeCCeeeeEEEEEecceEEEEEcCCcccccCCChHHHH
Q 012236 380 GYRSLIYSGDHDMVVPFLGTEAWIKSLNYSIIDDWRPWILHSQVAGYTRTYSNRMTYATVKGGGHIAPEYRPAECY 455 (467)
Q Consensus 380 ~irVLiY~Gd~D~i~n~~Gt~~wi~~L~w~~~~~~~~w~~~~~~aG~~k~~~~~Ltf~~V~~AGHmvP~DqP~~a~ 455 (467)
+++|++..|+.|.+++..-.+.+.+.+ .+..++++.++||+++.++|++..
T Consensus 176 ~~pvl~i~g~~D~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~gH~~~~~~p~~~~ 226 (228)
T PF12697_consen 176 KVPVLVIHGEDDPIVPPESAEELADKL-------------------------PNAELVVIPGAGHFLFLEQPDEVA 226 (228)
T ss_dssp SSEEEEEEETTSSSSHHHHHHHHHHHS-------------------------TTEEEEEETTSSSTHHHHSHHHHH
T ss_pred CCCeEEeecCCCCCCCHHHHHHHHHHC-------------------------CCCEEEEECCCCCccHHHCHHHHh
Confidence 799999999999999954444444332 236778999999999999998754
No 85
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=92.47 E-value=0.3 Score=54.17 Aligned_cols=144 Identities=20% Similarity=0.188 Sum_probs=79.0
Q ss_pred EeeeEEecCCCCceEEEEEEecCC--CCCCCCEEEEECCCCchHHHhHHHHhhCceEEeccCCCCCCCcceeCCCCcccC
Q 012236 42 ETGYVGVGESEDAQLFYYFVKSEK--NPKEDPLLLWLTGGPGCSAFSALVYEIGPINFNILEYNGSLPTLHLNPYSWTKE 119 (467)
Q Consensus 42 ~sGy~~~~~~~~~~lfy~f~es~~--~~~~~p~~lwlnGGPG~Ss~~g~~~E~GP~~~~~~~~~~~~~~~~~n~~sW~~~ 119 (467)
..+-+.++ +-..++++.-.++ +.++-|++++..||||+-+..+.| .+..|++.+...
T Consensus 499 ~~~~i~~~---~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~------------------~~~~~~~~~s~~ 557 (755)
T KOG2100|consen 499 EFGKIEID---GITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKF------------------SVDWNEVVVSSR 557 (755)
T ss_pred eeEEEEec---cEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeE------------------EecHHHHhhccC
Confidence 34444442 4566677765542 335679999999999933332111 122333333333
Q ss_pred -CceEEEecCCccccccccCCCCcc--cCchHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcc
Q 012236 120 -ASILFVDSPVGTGFSYVRTPLASQ--TGDFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENE 196 (467)
Q Consensus 120 -an~l~iDqPvG~GfS~~~~~~~~~--~~~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~ 196 (467)
+=++.|| +.|+|+.-..-..... -.+. ..+|.....+.+.+.+ ..-...+.|+|-||||.. +.+++...+
T Consensus 558 g~~v~~vd-~RGs~~~G~~~~~~~~~~lG~~-ev~D~~~~~~~~~~~~-~iD~~ri~i~GwSyGGy~----t~~~l~~~~ 630 (755)
T KOG2100|consen 558 GFAVLQVD-GRGSGGYGWDFRSALPRNLGDV-EVKDQIEAVKKVLKLP-FIDRSRVAIWGWSYGGYL----TLKLLESDP 630 (755)
T ss_pred CeEEEEEc-CCCcCCcchhHHHHhhhhcCCc-chHHHHHHHHHHHhcc-cccHHHeEEeccChHHHH----HHHHhhhCc
Confidence 4577888 7788865322111111 1222 2345556666665554 333456999999999954 444444331
Q ss_pred cCCCCceeeeEeEecCCccCcc
Q 012236 197 EGIKPLINLQGYILGNPKTDKI 218 (467)
Q Consensus 197 ~~~~~~inLkGi~iGng~i~p~ 218 (467)
.--+|--+..+|++|-.
T Consensus 631 -----~~~fkcgvavaPVtd~~ 647 (755)
T KOG2100|consen 631 -----GDVFKCGVAVAPVTDWL 647 (755)
T ss_pred -----CceEEEEEEecceeeee
Confidence 11355556677777654
No 86
>PRK06489 hypothetical protein; Provisional
Probab=92.22 E-value=0.38 Score=48.46 Aligned_cols=141 Identities=13% Similarity=0.085 Sum_probs=77.2
Q ss_pred CceeEeeeEEecCCCCceEEEEEEecCC---CCCCCCEEEEECCCCchHHHhH--HHHhhCceEEeccCCCCCCCcceeC
Q 012236 38 SFELETGYVGVGESEDAQLFYYFVKSEK---NPKEDPLLLWLTGGPGCSAFSA--LVYEIGPINFNILEYNGSLPTLHLN 112 (467)
Q Consensus 38 ~~~~~sGy~~~~~~~~~~lfy~f~es~~---~~~~~p~~lwlnGGPG~Ss~~g--~~~E~GP~~~~~~~~~~~~~~~~~n 112 (467)
++...+|. .++ +.+++|.-+.... ++++.|.||.++|++|.+..+- .+. +..+.. .
T Consensus 38 ~~~~~~~~-~~~---g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~~~~~~~~---~~l~~~------------~ 98 (360)
T PRK06489 38 DFTFHSGE-TLP---ELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKSFLSPTFA---GELFGP------------G 98 (360)
T ss_pred ceeccCCC-CcC---CceEEEEecCCCCcccccCCCCeEEEeCCCCCchhhhccchhH---HHhcCC------------C
Confidence 34445564 222 4677776442110 1223688999999998776541 111 000000 0
Q ss_pred CCCcccCCceEEEecCCccccccccCCCC---c-ccCchHHHHHHHHHHHHHHHHCCCCCCCCe-EEEeccCCccchHHH
Q 012236 113 PYSWTKEASILFVDSPVGTGFSYVRTPLA---S-QTGDFKQVHQVDQFLRKWLMDHPEFLSNPF-YVGGDSYSGITVPPL 187 (467)
Q Consensus 113 ~~sW~~~an~l~iDqPvG~GfS~~~~~~~---~-~~~~~~~a~~~~~fL~~F~~~fp~~~~~~~-~i~GESYgG~yvP~l 187 (467)
..--.+..++|.+|.| |.|.|....... . ..+.++.++++.+++.+ . +.-.++ +|.|+|.||..+-.+
T Consensus 99 ~~l~~~~~~Via~Dl~-GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~~---~---lgi~~~~~lvG~SmGG~vAl~~ 171 (360)
T PRK06489 99 QPLDASKYFIILPDGI-GHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVTE---G---LGVKHLRLILGTSMGGMHAWMW 171 (360)
T ss_pred CcccccCCEEEEeCCC-CCCCCCCCCcCCCCCCCcccHHHHHHHHHHHHHH---h---cCCCceeEEEEECHHHHHHHHH
Confidence 0001245799999999 999885322110 0 12344555555554432 1 222356 489999999888888
Q ss_pred HHHHHhhcccCCCCceeeeEeEecCCc
Q 012236 188 VQQISNENEEGIKPLINLQGYILGNPK 214 (467)
Q Consensus 188 A~~i~~~n~~~~~~~inLkGi~iGng~ 214 (467)
|.+--+ .++++++.++.
T Consensus 172 A~~~P~----------~V~~LVLi~s~ 188 (360)
T PRK06489 172 GEKYPD----------FMDALMPMASQ 188 (360)
T ss_pred HHhCch----------hhheeeeeccC
Confidence 765322 37788876654
No 87
>PRK11071 esterase YqiA; Provisional
Probab=92.01 E-value=0.53 Score=42.84 Aligned_cols=54 Identities=11% Similarity=0.145 Sum_probs=42.3
Q ss_pred CCeEEEEcCCCccccCchhHHHHHHhcCCCCccCccceeeCCeeeeEEEEEecceEEEEEcCCcccccCCChHHHHHHHH
Q 012236 380 GYRSLIYSGDHDMVVPFLGTEAWIKSLNYSIIDDWRPWILHSQVAGYTRTYSNRMTYATVKGGGHIAPEYRPAECYAMFQ 459 (467)
Q Consensus 380 ~irVLiY~Gd~D~i~n~~Gt~~wi~~L~w~~~~~~~~w~~~~~~aG~~k~~~~~Ltf~~V~~AGHmvP~DqP~~a~~m~~ 459 (467)
..+|+|.+|+.|-++|+.-..+..++ .....+.||+|.- ...+..++.+.
T Consensus 136 ~~~v~iihg~~De~V~~~~a~~~~~~----------------------------~~~~~~~ggdH~f--~~~~~~~~~i~ 185 (190)
T PRK11071 136 PDLIWLLQQTGDEVLDYRQAVAYYAA----------------------------CRQTVEEGGNHAF--VGFERYFNQIV 185 (190)
T ss_pred hhhEEEEEeCCCCcCCHHHHHHHHHh----------------------------cceEEECCCCcch--hhHHHhHHHHH
Confidence 46899999999999999987765432 2335779999998 44488999999
Q ss_pred HHHc
Q 012236 460 RWIN 463 (467)
Q Consensus 460 ~fl~ 463 (467)
.|++
T Consensus 186 ~fl~ 189 (190)
T PRK11071 186 DFLG 189 (190)
T ss_pred HHhc
Confidence 9875
No 88
>PRK11460 putative hydrolase; Provisional
Probab=91.54 E-value=1.3 Score=41.69 Aligned_cols=37 Identities=16% Similarity=0.095 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHH
Q 012236 153 VDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQ 190 (467)
Q Consensus 153 ~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~ 190 (467)
+.++++.+.+.. .....+++|.|.|.||..+-.++.+
T Consensus 87 l~~~i~~~~~~~-~~~~~~i~l~GfS~Gg~~al~~a~~ 123 (232)
T PRK11460 87 FIETVRYWQQQS-GVGASATALIGFSQGAIMALEAVKA 123 (232)
T ss_pred HHHHHHHHHHhc-CCChhhEEEEEECHHHHHHHHHHHh
Confidence 444444433332 3445689999999999998776643
No 89
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=91.23 E-value=0.78 Score=37.27 Aligned_cols=60 Identities=23% Similarity=0.285 Sum_probs=48.7
Q ss_pred CCeEEEEcCCCccccCchhHHHHHHhcCCCCccCccceeeCCeeeeEEEEEecceEEEEEcCCcccccCCChHHHHHHHH
Q 012236 380 GYRSLIYSGDHDMVVPFLGTEAWIKSLNYSIIDDWRPWILHSQVAGYTRTYSNRMTYATVKGGGHIAPEYRPAECYAMFQ 459 (467)
Q Consensus 380 ~irVLiY~Gd~D~i~n~~Gt~~wi~~L~w~~~~~~~~w~~~~~~aG~~k~~~~~Ltf~~V~~AGHmvP~DqP~~a~~m~~ 459 (467)
..+||+.++..|.+.|+.+.++..+.|. +-..+++.++||-+-...-.-+.++++
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~-------------------------~s~lvt~~g~gHg~~~~~s~C~~~~v~ 88 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLP-------------------------GSRLVTVDGAGHGVYAGGSPCVDKAVD 88 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCC-------------------------CceEEEEeccCcceecCCChHHHHHHH
Confidence 3899999999999999999998888754 235699999999998544456678888
Q ss_pred HHHcC
Q 012236 460 RWINH 464 (467)
Q Consensus 460 ~fl~~ 464 (467)
+||..
T Consensus 89 ~yl~~ 93 (103)
T PF08386_consen 89 DYLLD 93 (103)
T ss_pred HHHHc
Confidence 88764
No 90
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=91.13 E-value=1.1 Score=47.09 Aligned_cols=37 Identities=14% Similarity=0.135 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHH
Q 012236 151 HQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLV 188 (467)
Q Consensus 151 ~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA 188 (467)
...++|+++-...|. -..+++.|+|||.||+.+-.++
T Consensus 158 ~~al~wv~~~i~~fg-gd~~~v~~~G~SaG~~~~~~~~ 194 (493)
T cd00312 158 RLALKWVQDNIAAFG-GDPDSVTIFGESAGGASVSLLL 194 (493)
T ss_pred HHHHHHHHHHHHHhC-CCcceEEEEeecHHHHHhhhHh
Confidence 345677777777775 3446899999999998664443
No 91
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=91.12 E-value=0.97 Score=42.19 Aligned_cols=40 Identities=15% Similarity=0.129 Sum_probs=30.5
Q ss_pred CCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEeEecCCcc
Q 012236 166 EFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGYILGNPKT 215 (467)
Q Consensus 166 ~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~iGng~i 215 (467)
..-.+.+|++|.|=||.+.-.++..--+ -+.++++..|..
T Consensus 93 ~iD~~RVyv~G~S~Gg~ma~~la~~~pd----------~faa~a~~sG~~ 132 (220)
T PF10503_consen 93 NIDPSRVYVTGLSNGGMMANVLACAYPD----------LFAAVAVVSGVP 132 (220)
T ss_pred ccCCCceeeEEECHHHHHHHHHHHhCCc----------cceEEEeecccc
Confidence 4666789999999999888877765333 377888877764
No 92
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=90.16 E-value=3.4 Score=39.90 Aligned_cols=129 Identities=16% Similarity=0.095 Sum_probs=71.1
Q ss_pred CceEEEEEEecCCCCCCCCEEEEECCCCchHHHhH-------HHHhhCceEEeccCCCCCCCcceeCCCCcccCCceEEE
Q 012236 53 DAQLFYYFVKSEKNPKEDPLLLWLTGGPGCSAFSA-------LVYEIGPINFNILEYNGSLPTLHLNPYSWTKEASILFV 125 (467)
Q Consensus 53 ~~~lfy~f~es~~~~~~~p~~lwlnGGPG~Ss~~g-------~~~E~GP~~~~~~~~~~~~~~~~~n~~sW~~~an~l~i 125 (467)
+.+.-||++.....++..||||-|+|+=|.....- +..+.|=..+-++ .-+-+||
T Consensus 44 g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPd----------g~~~~wn-------- 105 (312)
T COG3509 44 GLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPD----------GYDRAWN-------- 105 (312)
T ss_pred CCccceEEEcCCCCCCCCCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcC----------ccccccC--------
Confidence 46778998877777788899999999977665431 1112221111111 1223333
Q ss_pred ecCCccccccccCCCCcccCchHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCceee
Q 012236 126 DSPVGTGFSYVRTPLASQTGDFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINL 205 (467)
Q Consensus 126 DqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inL 205 (467)
|-+.|-+++..+. ....+++ ..+.+.......+|- .....+||+|-|=||.++-.++..--+ -+
T Consensus 106 --~~~~~~~~~p~~~--~~g~ddV-gflr~lva~l~~~~g-idp~RVyvtGlS~GG~Ma~~lac~~p~----------~f 169 (312)
T COG3509 106 --ANGCGNWFGPADR--RRGVDDV-GFLRALVAKLVNEYG-IDPARVYVTGLSNGGRMANRLACEYPD----------IF 169 (312)
T ss_pred --CCcccccCCcccc--cCCccHH-HHHHHHHHHHHHhcC-cCcceEEEEeeCcHHHHHHHHHhcCcc----------cc
Confidence 3355555433221 1122222 222222222223332 344579999999999988777754222 26
Q ss_pred eEeEecCCcc
Q 012236 206 QGYILGNPKT 215 (467)
Q Consensus 206 kGi~iGng~i 215 (467)
.+|++..|..
T Consensus 170 aa~A~VAg~~ 179 (312)
T COG3509 170 AAIAPVAGLL 179 (312)
T ss_pred cceeeeeccc
Confidence 7777777766
No 93
>PLN02454 triacylglycerol lipase
Probab=89.90 E-value=0.86 Score=46.33 Aligned_cols=69 Identities=12% Similarity=0.122 Sum_probs=52.3
Q ss_pred chHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEeEecCCccCc
Q 012236 146 DFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGYILGNPKTDK 217 (467)
Q Consensus 146 ~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~iGng~i~p 217 (467)
...+.+++...+++..+.+|..+ ..++|+|||-||-.+-..|..|...... ...+++..+..|.|-+..
T Consensus 205 ~~S~r~qvl~~V~~l~~~Yp~~~-~sI~vTGHSLGGALAtLaA~di~~~g~~--~~~~~V~~~TFGsPRVGN 273 (414)
T PLN02454 205 KLSARSQLLAKIKELLERYKDEK-LSIVLTGHSLGASLATLAAFDIVENGVS--GADIPVTAIVFGSPQVGN 273 (414)
T ss_pred hHHHHHHHHHHHHHHHHhCCCCC-ceEEEEecCHHHHHHHHHHHHHHHhccc--ccCCceEEEEeCCCcccC
Confidence 34677899999999999998753 3699999999999999998888764311 123457778888877654
No 94
>PRK10566 esterase; Provisional
Probab=88.33 E-value=0.69 Score=43.53 Aligned_cols=111 Identities=12% Similarity=0.156 Sum_probs=62.8
Q ss_pred EEEEEEecCCCCCCCCEEEEECCCCchHHHhHHHHhhCceEEeccCCCCCCCcceeCCCCcccCCceEEEecCCcccccc
Q 012236 56 LFYYFVKSEKNPKEDPLLLWLTGGPGCSAFSALVYEIGPINFNILEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGFSY 135 (467)
Q Consensus 56 lfy~f~es~~~~~~~p~~lwlnGGPG~Ss~~g~~~E~GP~~~~~~~~~~~~~~~~~n~~sW~~~an~l~iDqPvG~GfS~ 135 (467)
.++-++++....+..|+||.++|++|.......+.. .+. .+-.+++.+|.| |.|-|+
T Consensus 13 ~~~~~~p~~~~~~~~p~vv~~HG~~~~~~~~~~~~~----------------~l~------~~G~~v~~~d~~-g~G~~~ 69 (249)
T PRK10566 13 EVLHAFPAGQRDTPLPTVFFYHGFTSSKLVYSYFAV----------------ALA------QAGFRVIMPDAP-MHGARF 69 (249)
T ss_pred ceEEEcCCCCCCCCCCEEEEeCCCCcccchHHHHHH----------------HHH------hCCCEEEEecCC-cccccC
Confidence 344444543333457999999999887654322210 011 112578999988 777554
Q ss_pred ccCCCCccc----CchHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHH
Q 012236 136 VRTPLASQT----GDFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQ 190 (467)
Q Consensus 136 ~~~~~~~~~----~~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~ 190 (467)
......... ...+..+++..++ .++...+.....+++|+|+|+||..+-.++.+
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~ 127 (249)
T PRK10566 70 SGDEARRLNHFWQILLQNMQEFPTLR-AAIREEGWLLDDRLAVGGASMGGMTALGIMAR 127 (249)
T ss_pred CCccccchhhHHHHHHHHHHHHHHHH-HHHHhcCCcCccceeEEeecccHHHHHHHHHh
Confidence 321110000 0012344454444 33344444456789999999999999877654
No 95
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=87.73 E-value=1.1 Score=40.87 Aligned_cols=74 Identities=15% Similarity=0.152 Sum_probs=51.0
Q ss_pred ceEEEecCCccccccc---cCCCCcccCchHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhccc
Q 012236 121 SILFVDSPVGTGFSYV---RTPLASQTGDFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEE 197 (467)
Q Consensus 121 n~l~iDqPvG~GfS~~---~~~~~~~~~~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~ 197 (467)
+++-+|+| |.|+|.. ... ..-..+++.+.+..+.+..+ ..++++.|+|+||..+-..|..--+
T Consensus 2 ~vi~~d~r-G~g~S~~~~~~~~------~~~~~~~~~~~~~~~~~~l~---~~~~~~vG~S~Gg~~~~~~a~~~p~---- 67 (230)
T PF00561_consen 2 DVILFDLR-GFGYSSPHWDPDF------PDYTTDDLAADLEALREALG---IKKINLVGHSMGGMLALEYAAQYPE---- 67 (230)
T ss_dssp EEEEEECT-TSTTSSSCCGSGS------CTHCHHHHHHHHHHHHHHHT---TSSEEEEEETHHHHHHHHHHHHSGG----
T ss_pred EEEEEeCC-CCCCCCCCccCCc------ccccHHHHHHHHHHHHHHhC---CCCeEEEEECCChHHHHHHHHHCch----
Confidence 57889988 9999974 222 22334445555555555554 3459999999999888777754322
Q ss_pred CCCCceeeeEeEecCCc
Q 012236 198 GIKPLINLQGYILGNPK 214 (467)
Q Consensus 198 ~~~~~inLkGi~iGng~ 214 (467)
.++++++.++.
T Consensus 68 ------~v~~lvl~~~~ 78 (230)
T PF00561_consen 68 ------RVKKLVLISPP 78 (230)
T ss_dssp ------GEEEEEEESES
T ss_pred ------hhcCcEEEeee
Confidence 58999888876
No 96
>PRK11460 putative hydrolase; Provisional
Probab=87.30 E-value=0.81 Score=43.05 Aligned_cols=62 Identities=15% Similarity=0.054 Sum_probs=46.6
Q ss_pred CCeEEEEcCCCccccCchhHHHHHHhcCCCCccCccceeeCCeeeeEEEEEecceEEEEEcCCcccccCCChHHHHHHHH
Q 012236 380 GYRSLIYSGDHDMVVPFLGTEAWIKSLNYSIIDDWRPWILHSQVAGYTRTYSNRMTYATVKGGGHIAPEYRPAECYAMFQ 459 (467)
Q Consensus 380 ~irVLiY~Gd~D~i~n~~Gt~~wi~~L~w~~~~~~~~w~~~~~~aG~~k~~~~~Ltf~~V~~AGHmvP~DqP~~a~~m~~ 459 (467)
+.+|++.+|..|.+++..-.++..+.|+= .+...++.++.++||.+..+.-+.+.+-++
T Consensus 148 ~~pvli~hG~~D~vvp~~~~~~~~~~L~~---------------------~g~~~~~~~~~~~gH~i~~~~~~~~~~~l~ 206 (232)
T PRK11460 148 ATTIHLIHGGEDPVIDVAHAVAAQEALIS---------------------LGGDVTLDIVEDLGHAIDPRLMQFALDRLR 206 (232)
T ss_pred CCcEEEEecCCCCccCHHHHHHHHHHHHH---------------------CCCCeEEEEECCCCCCCCHHHHHHHHHHHH
Confidence 57999999999999999988887777641 112477888899999997655555555555
Q ss_pred HHH
Q 012236 460 RWI 462 (467)
Q Consensus 460 ~fl 462 (467)
+++
T Consensus 207 ~~l 209 (232)
T PRK11460 207 YTV 209 (232)
T ss_pred HHc
Confidence 554
No 97
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=86.40 E-value=1.4 Score=40.47 Aligned_cols=63 Identities=17% Similarity=0.179 Sum_probs=45.1
Q ss_pred cCCeEEEEcCCCccccCchhHHHHHHhcCCCCccCccceeeCCeeeeEEEEEecceEEEEEcCCcccccCCCh-HHHHHH
Q 012236 379 KGYRSLIYSGDHDMVVPFLGTEAWIKSLNYSIIDDWRPWILHSQVAGYTRTYSNRMTYATVKGGGHIAPEYRP-AECYAM 457 (467)
Q Consensus 379 ~~irVLiY~Gd~D~i~n~~Gt~~wi~~L~w~~~~~~~~w~~~~~~aG~~k~~~~~Ltf~~V~~AGHmvP~DqP-~~a~~m 457 (467)
...+|||.+|+.|.+|+...++++.+.|.-. +....++++.++||-...++. ....+.
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~---------------------g~~~~~~~~p~~gH~~~~~~~~~~~~~~ 201 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQSLRLYNALRKA---------------------GKPVELLIFPGEGHGFGNPENRRDWYER 201 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHHHHHHHHHHHHT---------------------TSSEEEEEETT-SSSTTSHHHHHHHHHH
T ss_pred CCCCEEEEccCCCCccCHHHHHHHHHHHHhc---------------------CCCEEEEEcCcCCCCCCCchhHHHHHHH
Confidence 4689999999999999999999999888622 124888999999995543322 234444
Q ss_pred HHHHH
Q 012236 458 FQRWI 462 (467)
Q Consensus 458 ~~~fl 462 (467)
+.+|+
T Consensus 202 ~~~f~ 206 (213)
T PF00326_consen 202 ILDFF 206 (213)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44454
No 98
>PRK05855 short chain dehydrogenase; Validated
Probab=85.93 E-value=0.83 Score=48.83 Aligned_cols=59 Identities=14% Similarity=0.076 Sum_probs=44.3
Q ss_pred CCeEEEEcCCCccccCchhHHHHHHhcCCCCccCccceeeCCeeeeEEEEEecceEEEEEcCCcccccCCChHHHHHHHH
Q 012236 380 GYRSLIYSGDHDMVVPFLGTEAWIKSLNYSIIDDWRPWILHSQVAGYTRTYSNRMTYATVKGGGHIAPEYRPAECYAMFQ 459 (467)
Q Consensus 380 ~irVLiY~Gd~D~i~n~~Gt~~wi~~L~w~~~~~~~~w~~~~~~aG~~k~~~~~Ltf~~V~~AGHmvP~DqP~~a~~m~~ 459 (467)
.+++||.+|+.|.+++....+.+.+. . .+..++++ .+||+++.++|++..+.+.
T Consensus 233 ~~P~lii~G~~D~~v~~~~~~~~~~~------------------------~-~~~~~~~~-~~gH~~~~e~p~~~~~~i~ 286 (582)
T PRK05855 233 DVPVQLIVPTGDPYVRPALYDDLSRW------------------------V-PRLWRREI-KAGHWLPMSHPQVLAAAVA 286 (582)
T ss_pred cCceEEEEeCCCcccCHHHhcccccc------------------------C-CcceEEEc-cCCCcchhhChhHHHHHHH
Confidence 58999999999999996644322111 1 12444555 5899999999999999999
Q ss_pred HHHcC
Q 012236 460 RWINH 464 (467)
Q Consensus 460 ~fl~~ 464 (467)
+|+..
T Consensus 287 ~fl~~ 291 (582)
T PRK05855 287 EFVDA 291 (582)
T ss_pred HHHHh
Confidence 99864
No 99
>PLN02511 hydrolase
Probab=85.68 E-value=0.96 Score=46.16 Aligned_cols=60 Identities=17% Similarity=0.190 Sum_probs=43.9
Q ss_pred cCCeEEEEcCCCccccCchhHH-HHHHhcCCCCccCccceeeCCeeeeEEEEEecceEEEEEcCCcccccCCChHH----
Q 012236 379 KGYRSLIYSGDHDMVVPFLGTE-AWIKSLNYSIIDDWRPWILHSQVAGYTRTYSNRMTYATVKGGGHIAPEYRPAE---- 453 (467)
Q Consensus 379 ~~irVLiY~Gd~D~i~n~~Gt~-~wi~~L~w~~~~~~~~w~~~~~~aG~~k~~~~~Ltf~~V~~AGHmvP~DqP~~---- 453 (467)
-.+++||.+|+.|.+++..... ..++ .. .+..++++.++||+...++|+.
T Consensus 297 I~vPtLiI~g~dDpi~p~~~~~~~~~~------------------------~~-p~~~l~~~~~gGH~~~~E~p~~~~~~ 351 (388)
T PLN02511 297 VRVPLLCIQAANDPIAPARGIPREDIK------------------------AN-PNCLLIVTPSGGHLGWVAGPEAPFGA 351 (388)
T ss_pred CCCCeEEEEcCCCCcCCcccCcHhHHh------------------------cC-CCEEEEECCCcceeccccCCCCCCCC
Confidence 3689999999999999875331 1111 12 3588899999999999999864
Q ss_pred --HHHHHHHHHc
Q 012236 454 --CYAMFQRWIN 463 (467)
Q Consensus 454 --a~~m~~~fl~ 463 (467)
+.+.+.+|+.
T Consensus 352 ~w~~~~i~~Fl~ 363 (388)
T PLN02511 352 PWTDPVVMEFLE 363 (388)
T ss_pred ccHHHHHHHHHH
Confidence 3566767764
No 100
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=84.98 E-value=2.4 Score=39.20 Aligned_cols=59 Identities=12% Similarity=0.085 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEeEecCCccCcc
Q 012236 148 KQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGYILGNPKTDKI 218 (467)
Q Consensus 148 ~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~iGng~i~p~ 218 (467)
+.++.+.+++....+.. ...++++|.|-|=||...-.++.+- +-.+.|++.-+|++-+.
T Consensus 85 ~s~~~l~~li~~~~~~~--i~~~ri~l~GFSQGa~~al~~~l~~----------p~~~~gvv~lsG~~~~~ 143 (216)
T PF02230_consen 85 ESAERLDELIDEEVAYG--IDPSRIFLGGFSQGAAMALYLALRY----------PEPLAGVVALSGYLPPE 143 (216)
T ss_dssp HHHHHHHHHHHHHHHTT----GGGEEEEEETHHHHHHHHHHHCT----------SSTSSEEEEES---TTG
T ss_pred HHHHHHHHHHHHHHHcC--CChhheehhhhhhHHHHHHHHHHHc----------CcCcCEEEEeecccccc
Confidence 34444555555444332 4567899999999998888777432 12589999999987554
No 101
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=84.22 E-value=2.2 Score=36.22 Aligned_cols=63 Identities=16% Similarity=0.304 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEeEecCCccC
Q 012236 148 KQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGYILGNPKTD 216 (467)
Q Consensus 148 ~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~iGng~i~ 216 (467)
...+.+.+.|++..+.+| +.++.|+|+|-||-.+-.+|..+.+.... ...+++-+..|.|-+.
T Consensus 45 ~~~~~~~~~l~~~~~~~~---~~~i~itGHSLGGalA~l~a~~l~~~~~~---~~~~~~~~~fg~P~~~ 107 (140)
T PF01764_consen 45 SLYDQILDALKELVEKYP---DYSIVITGHSLGGALASLAAADLASHGPS---SSSNVKCYTFGAPRVG 107 (140)
T ss_dssp HHHHHHHHHHHHHHHHST---TSEEEEEEETHHHHHHHHHHHHHHHCTTT---STTTEEEEEES-S--B
T ss_pred HHHHHHHHHHHHHHhccc---CccchhhccchHHHHHHHHHHhhhhcccc---cccceeeeecCCcccc
Confidence 455677788888778887 46899999999999999999999886532 1356788888877663
No 102
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=83.60 E-value=2.2 Score=41.15 Aligned_cols=71 Identities=14% Similarity=0.183 Sum_probs=46.3
Q ss_pred HhhhcCCeEEEEcCCCccccCchhHHHHHHhcCCCCccCccceeeCCeeeeEEEEEecceEEEEEcCCcccc-cCCChHH
Q 012236 375 SLSTKGYRSLIYSGDHDMVVPFLGTEAWIKSLNYSIIDDWRPWILHSQVAGYTRTYSNRMTYATVKGGGHIA-PEYRPAE 453 (467)
Q Consensus 375 ~LL~~~irVLiY~Gd~D~i~n~~Gt~~wi~~L~w~~~~~~~~w~~~~~~aG~~k~~~~~Ltf~~V~~AGHmv-P~DqP~~ 453 (467)
.|..-++++|+..|+.|... ..+.+.+... ..|+. . . .. .+.+++++.+|||.+ ..+.+++
T Consensus 202 ~l~~~~~P~ll~~g~~D~~~-----~~~~~~~~~~--~~~~~------~---l-~~-~~v~~~~~~~~~H~l~~e~~~~~ 263 (274)
T TIGR03100 202 GLERFQGPVLFILSGNDLTA-----QEFADSVLGE--PAWRG------A---L-ED-PGIERVEIDGADHTFSDRVWREW 263 (274)
T ss_pred HHHhcCCcEEEEEcCcchhH-----HHHHHHhccC--hhhHH------H---h-hc-CCeEEEecCCCCcccccHHHHHH
Confidence 34344799999999999873 2333321110 00100 0 0 12 358899999999999 5666699
Q ss_pred HHHHHHHHHc
Q 012236 454 CYAMFQRWIN 463 (467)
Q Consensus 454 a~~m~~~fl~ 463 (467)
..+.+.+||.
T Consensus 264 v~~~i~~wL~ 273 (274)
T TIGR03100 264 VAARTTEWLR 273 (274)
T ss_pred HHHHHHHHHh
Confidence 9999999985
No 103
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=83.43 E-value=3.3 Score=35.94 Aligned_cols=60 Identities=18% Similarity=0.187 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEeEecCCcc
Q 012236 148 KQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGYILGNPKT 215 (467)
Q Consensus 148 ~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~iGng~i 215 (467)
.+++++...+++....+| ..+++|+|+|-||..+-.+|..+..+.. .-..+-+..|.|-+
T Consensus 9 ~~~~~i~~~~~~~~~~~p---~~~i~v~GHSlGg~lA~l~a~~~~~~~~-----~~~~~~~~fg~p~~ 68 (153)
T cd00741 9 SLANLVLPLLKSALAQYP---DYKIHVTGHSLGGALAGLAGLDLRGRGL-----GRLVRVYTFGPPRV 68 (153)
T ss_pred HHHHHHHHHHHHHHHHCC---CCeEEEEEcCHHHHHHHHHHHHHHhccC-----CCceEEEEeCCCcc
Confidence 445555566666655566 5689999999999999999988866421 12345555565544
No 104
>PLN02571 triacylglycerol lipase
Probab=83.36 E-value=3.6 Score=41.97 Aligned_cols=70 Identities=9% Similarity=0.063 Sum_probs=50.1
Q ss_pred hHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhccc----CCCCceeeeEeEecCCccCc
Q 012236 147 FKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEE----GIKPLINLQGYILGNPKTDK 217 (467)
Q Consensus 147 ~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~----~~~~~inLkGi~iGng~i~p 217 (467)
..+.++++..++.+.+.+|.. ..+++|+|||-||-.+-..|..|....-. .....+++..+..|.|-+..
T Consensus 204 ~Sar~qvl~eV~~L~~~y~~e-~~sI~VTGHSLGGALAtLaA~dl~~~g~n~~~~~~~~~~~V~v~TFGsPRVGN 277 (413)
T PLN02571 204 TSARDQVLNEVGRLVEKYKDE-EISITICGHSLGAALATLNAVDIVANGFNRSKSRPNKSCPVTAFVFASPRVGD 277 (413)
T ss_pred hhHHHHHHHHHHHHHHhcCcc-cccEEEeccchHHHHHHHHHHHHHHhcccccccccccCcceEEEEeCCCCccC
Confidence 356678999999999988864 34799999999999999888888653210 01123456777777776653
No 105
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=82.40 E-value=2.9 Score=41.30 Aligned_cols=60 Identities=22% Similarity=0.190 Sum_probs=39.2
Q ss_pred cCCceEEEecCCccccccccCCCCcccCchHHHHHHHHHHHHHHHH-CCCCCCCCeEEEeccCCccchH
Q 012236 118 KEASILFVDSPVGTGFSYVRTPLASQTGDFKQVHQVDQFLRKWLMD-HPEFLSNPFYVGGDSYSGITVP 185 (467)
Q Consensus 118 ~~an~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fL~~F~~~-fp~~~~~~~~i~GESYgG~yvP 185 (467)
..+|++..--| |||+|.+... .++..++ ++++.+++.. ...-+.+.+.+.|+|-||--..
T Consensus 170 ~~aNvl~fNYp-GVg~S~G~~s------~~dLv~~-~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa 230 (365)
T PF05677_consen 170 LGANVLVFNYP-GVGSSTGPPS------RKDLVKD-YQACVRYLRDEEQGPKAKNIILYGHSLGGGVQA 230 (365)
T ss_pred cCCcEEEECCC-ccccCCCCCC------HHHHHHH-HHHHHHHHHhcccCCChheEEEeeccccHHHHH
Confidence 45899999988 9999977542 1333333 2344444443 3234557899999999996543
No 106
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=82.12 E-value=1.7 Score=48.35 Aligned_cols=87 Identities=14% Similarity=0.103 Sum_probs=55.3
Q ss_pred CCceEEEecCCccccccccCCCCcccCchHHHHHHHHHHHHH----HH------HCCCCCCCCeEEEeccCCccchHHHH
Q 012236 119 EASILFVDSPVGTGFSYVRTPLASQTGDFKQVHQVDQFLRKW----LM------DHPEFLSNPFYVGGDSYSGITVPPLV 188 (467)
Q Consensus 119 ~an~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fL~~F----~~------~fp~~~~~~~~i~GESYgG~yvP~lA 188 (467)
=..++++|.. |+|-|-+.... ....+.+.+.+..++|..- .+ .-..+.+-.+-++|.||+|...-.+|
T Consensus 279 GYaVV~~D~R-Gtg~SeG~~~~-~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G~~~~~aA 356 (767)
T PRK05371 279 GFAVVYVSGI-GTRGSDGCPTT-GDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLGTLPNAVA 356 (767)
T ss_pred CeEEEEEcCC-CCCCCCCcCcc-CCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHHHHHHHHH
Confidence 4699999965 99999875322 1123334444555555431 11 01123356899999999998887776
Q ss_pred HHHHhhcccCCCCceeeeEeEecCCccCc
Q 012236 189 QQISNENEEGIKPLINLQGYILGNPKTDK 217 (467)
Q Consensus 189 ~~i~~~n~~~~~~~inLkGi~iGng~i~p 217 (467)
..-. -.||.|+-..|+.+.
T Consensus 357 a~~p----------p~LkAIVp~a~is~~ 375 (767)
T PRK05371 357 TTGV----------EGLETIIPEAAISSW 375 (767)
T ss_pred hhCC----------CcceEEEeeCCCCcH
Confidence 5321 259999988888764
No 107
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=81.09 E-value=1.9 Score=42.08 Aligned_cols=65 Identities=28% Similarity=0.424 Sum_probs=48.3
Q ss_pred CCeEEEEcCCCccccCchhHHHHHHhcCCCCccCccceeeCCeeeeEEEEEe-cceEEEEEcCCccccc--CCChHHHHH
Q 012236 380 GYRSLIYSGDHDMVVPFLGTEAWIKSLNYSIIDDWRPWILHSQVAGYTRTYS-NRMTYATVKGGGHIAP--EYRPAECYA 456 (467)
Q Consensus 380 ~irVLiY~Gd~D~i~n~~Gt~~wi~~L~w~~~~~~~~w~~~~~~aG~~k~~~-~~Ltf~~V~~AGHmvP--~DqP~~a~~ 456 (467)
+.+|+||+|..|-++|+..+.+.++++-= .+ .+.+|.++.+++|+.. ...|.+. .
T Consensus 219 ~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~---------------------~G~a~V~~~~~~~~~H~~~~~~~~~~a~-~ 276 (290)
T PF03583_consen 219 TVPVLIYQGTADEVVPPADTDALVAKWCA---------------------AGGADVEYVRYPGGGHLGAAFASAPDAL-A 276 (290)
T ss_pred CCCEEEEecCCCCCCChHHHHHHHHHHHH---------------------cCCCCEEEEecCCCChhhhhhcCcHHHH-H
Confidence 58999999999999999999998887431 12 3589999999999964 5666554 4
Q ss_pred HHHHHHcCCC
Q 012236 457 MFQRWINHDP 466 (467)
Q Consensus 457 m~~~fl~~~~ 466 (467)
-|+.=+.|+|
T Consensus 277 Wl~~rf~G~~ 286 (290)
T PF03583_consen 277 WLDDRFAGKP 286 (290)
T ss_pred HHHHHHCCCC
Confidence 4444444544
No 108
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=80.92 E-value=1.3 Score=43.34 Aligned_cols=90 Identities=22% Similarity=0.132 Sum_probs=57.4
Q ss_pred cCCCCCCCCEEEEECCCCchHHHhHHHHhhCceEEeccCCCCCCCcceeCCCCcccCCceEEEecCCccccccccCCCCc
Q 012236 63 SEKNPKEDPLLLWLTGGPGCSAFSALVYEIGPINFNILEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGFSYVRTPLAS 142 (467)
Q Consensus 63 s~~~~~~~p~~lwlnGGPG~Ss~~g~~~E~GP~~~~~~~~~~~~~~~~~n~~sW~~~an~l~iDqPvG~GfS~~~~~~~~ 142 (467)
+..+....|-++-++|==|+--.+.-+. .+-.. + +. +.+.=||.= -.|.|--...
T Consensus 45 ~~~~~~~~Pp~i~lHGl~GS~~Nw~sv~------k~Ls~-~-----l~---------~~v~~vd~R-nHG~Sp~~~~--- 99 (315)
T KOG2382|consen 45 SSENLERAPPAIILHGLLGSKENWRSVA------KNLSR-K-----LG---------RDVYAVDVR-NHGSSPKITV--- 99 (315)
T ss_pred cccccCCCCceEEecccccCCCCHHHHH------HHhcc-c-----cc---------CceEEEecc-cCCCCccccc---
Confidence 4456678899999998666543333222 01000 0 11 167778855 7888854332
Q ss_pred ccCchHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCc
Q 012236 143 QTGDFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSG 181 (467)
Q Consensus 143 ~~~~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG 181 (467)
.+-...|+|+..||..+-. .++..+..|.|+|.||
T Consensus 100 -h~~~~ma~dv~~Fi~~v~~---~~~~~~~~l~GHsmGG 134 (315)
T KOG2382|consen 100 -HNYEAMAEDVKLFIDGVGG---STRLDPVVLLGHSMGG 134 (315)
T ss_pred -cCHHHHHHHHHHHHHHccc---ccccCCceecccCcch
Confidence 4557788888888876532 2456789999999999
No 109
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=80.80 E-value=3 Score=41.79 Aligned_cols=61 Identities=20% Similarity=0.231 Sum_probs=45.8
Q ss_pred CCeEEEEcCCCccccCchhHHHHHHhcCCCCccCccceeeCCeeeeEEEEEecceEEEEEcCCcccccCCCh---HHHHH
Q 012236 380 GYRSLIYSGDHDMVVPFLGTEAWIKSLNYSIIDDWRPWILHSQVAGYTRTYSNRMTYATVKGGGHIAPEYRP---AECYA 456 (467)
Q Consensus 380 ~irVLiY~Gd~D~i~n~~Gt~~wi~~L~w~~~~~~~~w~~~~~~aG~~k~~~~~Ltf~~V~~AGHmvP~DqP---~~a~~ 456 (467)
.++||+.+|..|.+++....+.+.+.+.- ...++.++ .+||+.+.+.+ +.+..
T Consensus 286 ~~Pvliv~G~~D~i~~~~~~~~~~~~~~~-----------------------~~~~~~~~-~~gH~~~~~~~~~~~~v~~ 341 (350)
T TIGR01836 286 KMPILNIYAERDHLVPPDASKALNDLVSS-----------------------EDYTELSF-PGGHIGIYVSGKAQKEVPP 341 (350)
T ss_pred CCCeEEEecCCCCcCCHHHHHHHHHHcCC-----------------------CCeEEEEc-CCCCEEEEECchhHhhhhH
Confidence 68999999999999999988877776540 12344444 58999988866 66777
Q ss_pred HHHHHHcC
Q 012236 457 MFQRWINH 464 (467)
Q Consensus 457 m~~~fl~~ 464 (467)
-+.+||..
T Consensus 342 ~i~~wl~~ 349 (350)
T TIGR01836 342 AIGKWLQA 349 (350)
T ss_pred HHHHHHHh
Confidence 77788754
No 110
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=80.69 E-value=3.3 Score=41.97 Aligned_cols=60 Identities=18% Similarity=0.055 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHHHHCCCCCC-CCeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEeEecCCccCcc
Q 012236 149 QVHQVDQFLRKWLMDHPEFLS-NPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGYILGNPKTDKI 218 (467)
Q Consensus 149 ~a~~~~~fL~~F~~~fp~~~~-~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~iGng~i~p~ 218 (467)
+|.|...+|..-...||.... .|..+.|.|||| |+..++.+|.= -.+.||+=-.+|+-|.
T Consensus 162 qAiD~INAl~~l~k~~~~~~~~lp~I~~G~s~G~-yla~l~~k~aP---------~~~~~~iDns~~~~p~ 222 (403)
T PF11144_consen 162 QAIDIINALLDLKKIFPKNGGGLPKIYIGSSHGG-YLAHLCAKIAP---------WLFDGVIDNSSYALPP 222 (403)
T ss_pred HHHHHHHHHHHHHHhhhcccCCCcEEEEecCcHH-HHHHHHHhhCc---------cceeEEEecCccccch
Confidence 688899999988889999885 799999999988 44555555522 2477777667777664
No 111
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=80.64 E-value=3.5 Score=37.35 Aligned_cols=65 Identities=11% Similarity=0.170 Sum_probs=52.5
Q ss_pred cCchHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEeEecCCccCc
Q 012236 144 TGDFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGYILGNPKTDK 217 (467)
Q Consensus 144 ~~~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~iGng~i~p 217 (467)
.+.+|+|.|+-+.++.+.++.. .+.+.|.|-|+|.=-+|.+..++-..-+ =.+++|++..+-...
T Consensus 45 rtP~~~a~Dl~~~i~~y~~~w~---~~~vvLiGYSFGADvlP~~~nrLp~~~r------~~v~~v~Ll~p~~~~ 109 (192)
T PF06057_consen 45 RTPEQTAADLARIIRHYRARWG---RKRVVLIGYSFGADVLPFIYNRLPAALR------ARVAQVVLLSPSTTA 109 (192)
T ss_pred CCHHHHHHHHHHHHHHHHHHhC---CceEEEEeecCCchhHHHHHhhCCHHHH------hheeEEEEeccCCcc
Confidence 4678999999999998887654 7789999999999999999998877543 357888877765443
No 112
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=80.45 E-value=3.9 Score=39.36 Aligned_cols=59 Identities=17% Similarity=0.049 Sum_probs=47.3
Q ss_pred CCeEEEEcCCCccccCchhHHHHHHhcCCCCccCccceeeCCeeeeEEEEEecceEEEEEcCCcccccCCChHHHHHHHH
Q 012236 380 GYRSLIYSGDHDMVVPFLGTEAWIKSLNYSIIDDWRPWILHSQVAGYTRTYSNRMTYATVKGGGHIAPEYRPAECYAMFQ 459 (467)
Q Consensus 380 ~irVLiY~Gd~D~i~n~~Gt~~wi~~L~w~~~~~~~~w~~~~~~aG~~k~~~~~Ltf~~V~~AGHmvP~DqP~~a~~m~~ 459 (467)
.+++++..|..|.++|..-.+.+++.+. +-..+++ .+||+.+..+|+..-++|.
T Consensus 211 ~vP~l~I~g~~D~~ip~~~~~~m~~~~~-------------------------~~~~~~l-~~gH~p~ls~P~~~~~~i~ 264 (273)
T PLN02211 211 KVPRVYIKTLHDHVVKPEQQEAMIKRWP-------------------------PSQVYEL-ESDHSPFFSTPFLLFGLLI 264 (273)
T ss_pred ccceEEEEeCCCCCCCHHHHHHHHHhCC-------------------------ccEEEEE-CCCCCccccCHHHHHHHHH
Confidence 5899999999999999987777665532 1244666 5999999999999999998
Q ss_pred HHHcC
Q 012236 460 RWINH 464 (467)
Q Consensus 460 ~fl~~ 464 (467)
+....
T Consensus 265 ~~a~~ 269 (273)
T PLN02211 265 KAAAS 269 (273)
T ss_pred HHHHH
Confidence 87653
No 113
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=80.04 E-value=31 Score=33.66 Aligned_cols=85 Identities=18% Similarity=0.130 Sum_probs=53.6
Q ss_pred CceEEEecCCccccccccCCCCcccCchHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCC
Q 012236 120 ASILFVDSPVGTGFSYVRTPLASQTGDFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGI 199 (467)
Q Consensus 120 an~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~ 199 (467)
+-++-||-+..-...| +...+ .+.+.+.++.+=-..+. ...+.+.|+|+|=||+.+-.+|....+..
T Consensus 111 ~~vv~vdYrlaPe~~~-------p~~~~-d~~~a~~~l~~~~~~~g-~dp~~i~v~GdSAGG~La~~~a~~~~~~~---- 177 (312)
T COG0657 111 AVVVSVDYRLAPEHPF-------PAALE-DAYAAYRWLRANAAELG-IDPSRIAVAGDSAGGHLALALALAARDRG---- 177 (312)
T ss_pred CEEEecCCCCCCCCCC-------CchHH-HHHHHHHHHHhhhHhhC-CCccceEEEecCcccHHHHHHHHHHHhcC----
Confidence 4466666554433332 22222 23444444443222221 33568999999999999999999887752
Q ss_pred CCceeeeEeEecCCccCccc
Q 012236 200 KPLINLQGYILGNPKTDKIV 219 (467)
Q Consensus 200 ~~~inLkGi~iGng~i~p~~ 219 (467)
....++.++.-|++|...
T Consensus 178 --~~~p~~~~li~P~~d~~~ 195 (312)
T COG0657 178 --LPLPAAQVLISPLLDLTS 195 (312)
T ss_pred --CCCceEEEEEecccCCcc
Confidence 235789999999999875
No 114
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=79.94 E-value=4.1 Score=37.99 Aligned_cols=61 Identities=23% Similarity=0.301 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEeEecCCccC
Q 012236 148 KQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGYILGNPKTD 216 (467)
Q Consensus 148 ~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~iGng~i~ 216 (467)
.+.+++...+++..+++| +.+++++|+|-||-.+-.+|..+.+.. ...+++.+..|.|-+.
T Consensus 109 ~~~~~~~~~~~~~~~~~p---~~~i~vtGHSLGGaiA~l~a~~l~~~~-----~~~~i~~~tFg~P~vg 169 (229)
T cd00519 109 SLYNQVLPELKSALKQYP---DYKIIVTGHSLGGALASLLALDLRLRG-----PGSDVTVYTFGQPRVG 169 (229)
T ss_pred HHHHHHHHHHHHHHhhCC---CceEEEEccCHHHHHHHHHHHHHHhhC-----CCCceEEEEeCCCCCC
Confidence 344445566666666666 568999999999999988888877643 1345888888887764
No 115
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=78.71 E-value=10 Score=42.12 Aligned_cols=99 Identities=12% Similarity=0.077 Sum_probs=58.6
Q ss_pred CCCEEEEECCCCchHHHhHHHHhhCceEEeccCCCCCCCcceeCCCCcccCCceEEEecCCcccccccc---------CC
Q 012236 69 EDPLLLWLTGGPGCSAFSALVYEIGPINFNILEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGFSYVR---------TP 139 (467)
Q Consensus 69 ~~p~~lwlnGGPG~Ss~~g~~~E~GP~~~~~~~~~~~~~~~~~n~~sW~~~an~l~iDqPvG~GfS~~~---------~~ 139 (467)
..|+||+++|=.|....+-.+.+. +. .+-..++-+|.| |.|-|... ..
T Consensus 448 g~P~VVllHG~~g~~~~~~~lA~~----------------La------~~Gy~VIaiDlp-GHG~S~~~~~~~~~~a~~~ 504 (792)
T TIGR03502 448 GWPVVIYQHGITGAKENALAFAGT----------------LA------AAGVATIAIDHP-LHGARSFDANASGVNATNA 504 (792)
T ss_pred CCcEEEEeCCCCCCHHHHHHHHHH----------------HH------hCCcEEEEeCCC-CCCcccccccccccccccc
Confidence 358999999988877655322211 10 011346666766 66666221 11
Q ss_pred C--Cc---------ccCchHHHHHHHHHHHHHH------H---HCCCCCCCCeEEEeccCCccchHHHHHH
Q 012236 140 L--AS---------QTGDFKQVHQVDQFLRKWL------M---DHPEFLSNPFYVGGDSYSGITVPPLVQQ 190 (467)
Q Consensus 140 ~--~~---------~~~~~~~a~~~~~fL~~F~------~---~fp~~~~~~~~i~GESYgG~yvP~lA~~ 190 (467)
+ .| ..+..|...|+.......= . .+..+...++++.|||-||.....++..
T Consensus 505 ~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 505 NVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred CccceeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 1 01 1245777777776555432 1 1233556799999999999999888853
No 116
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=78.47 E-value=6.1 Score=35.84 Aligned_cols=62 Identities=21% Similarity=0.271 Sum_probs=43.7
Q ss_pred hhcCCeEEEEcCCCccccCchhHHHHHHhcCCCCccCccceeeCCeeeeEEEEEecceEEEEEcCCcccccCCChHHHHH
Q 012236 377 STKGYRSLIYSGDHDMVVPFLGTEAWIKSLNYSIIDDWRPWILHSQVAGYTRTYSNRMTYATVKGGGHIAPEYRPAECYA 456 (467)
Q Consensus 377 L~~~irVLiY~Gd~D~i~n~~Gt~~wi~~L~w~~~~~~~~w~~~~~~aG~~k~~~~~Ltf~~V~~AGHmvP~DqP~~a~~ 456 (467)
.....++++..|+.|.+.+....+.+.+.+.. ...++++.++||+...++|+...+
T Consensus 218 ~~~~~P~l~i~g~~d~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~gH~~~~~~p~~~~~ 273 (282)
T COG0596 218 ARITVPTLIIHGEDDPVVPAELARRLAAALPN------------------------DARLVVIPGAGHFPHLEAPEAFAA 273 (282)
T ss_pred ccCCCCeEEEecCCCCcCCHHHHHHHHhhCCC------------------------CceEEEeCCCCCcchhhcHHHHHH
Confidence 34469999999999955555433333332210 266788999999999999997777
Q ss_pred HHHHHH
Q 012236 457 MFQRWI 462 (467)
Q Consensus 457 m~~~fl 462 (467)
.+..|+
T Consensus 274 ~i~~~~ 279 (282)
T COG0596 274 ALLAFL 279 (282)
T ss_pred HHHHHH
Confidence 777644
No 117
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=78.39 E-value=4.7 Score=38.79 Aligned_cols=63 Identities=22% Similarity=0.312 Sum_probs=44.0
Q ss_pred ceEEEecCCccc------------------------cccccCCCCcc---cCchHHHHHHHHHHHHHHHHCCCCCCCCeE
Q 012236 121 SILFVDSPVGTG------------------------FSYVRTPLASQ---TGDFKQVHQVDQFLRKWLMDHPEFLSNPFY 173 (467)
Q Consensus 121 n~l~iDqPvG~G------------------------fS~~~~~~~~~---~~~~~~a~~~~~fL~~F~~~fp~~~~~~~~ 173 (467)
.+|-|-.|+|+| |||-.+--.+. ..-.++|..+++.+..-....|+=..-++|
T Consensus 33 ~~lvV~~pTGtGWVdp~a~~a~E~l~~GD~A~va~QYSylPSw~sfl~dr~~a~~a~~aL~~aV~~~~~~lP~~~RPkL~ 112 (289)
T PF10081_consen 33 KVLVVATPTGTGWVDPWAVDALEYLYGGDVAIVAMQYSYLPSWLSFLVDRDAAREAARALFEAVYARWSTLPEDRRPKLY 112 (289)
T ss_pred ceEEEEcCCCCCccCHHHHhHHHHHhCCCeEEEEeccccccchHHHhcccchHHHHHHHHHHHHHHHHHhCCcccCCeEE
Confidence 357777899999 55543222221 123567888899998888889887666699
Q ss_pred EEeccCCccc
Q 012236 174 VGGDSYSGIT 183 (467)
Q Consensus 174 i~GESYgG~y 183 (467)
++|||-|..=
T Consensus 113 l~GeSLGa~g 122 (289)
T PF10081_consen 113 LYGESLGAYG 122 (289)
T ss_pred EeccCccccc
Confidence 9999987543
No 118
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=78.33 E-value=3.1 Score=38.28 Aligned_cols=45 Identities=16% Similarity=0.287 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhc
Q 012236 149 QVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNEN 195 (467)
Q Consensus 149 ~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n 195 (467)
+-.|+.++...|++.+++ +|||.|+|+|=|+..+-.|-++.++.+
T Consensus 76 ay~DV~~AF~~yL~~~n~--GRPfILaGHSQGs~~l~~LL~e~~~~~ 120 (207)
T PF11288_consen 76 AYSDVRAAFDYYLANYNN--GRPFILAGHSQGSMHLLRLLKEEIAGD 120 (207)
T ss_pred hHHHHHHHHHHHHHhcCC--CCCEEEEEeChHHHHHHHHHHHHhcCc
Confidence 445778888888888764 799999999999998877777665543
No 119
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=77.89 E-value=1.8 Score=41.62 Aligned_cols=82 Identities=17% Similarity=0.159 Sum_probs=52.3
Q ss_pred CceEEEecCCccccccccCCCCcccCchHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCC
Q 012236 120 ASILFVDSPVGTGFSYVRTPLASQTGDFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGI 199 (467)
Q Consensus 120 an~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~ 199 (467)
..+|.+| .-|+|-|.+.-... ..+.++|.++.+ +|+..-| .-+-.+-++|-||+|......|..-
T Consensus 58 Y~vV~~D-~RG~g~S~G~~~~~----~~~e~~D~~d~I-~W~~~Qp-ws~G~VGm~G~SY~G~~q~~~A~~~-------- 122 (272)
T PF02129_consen 58 YAVVVQD-VRGTGGSEGEFDPM----SPNEAQDGYDTI-EWIAAQP-WSNGKVGMYGISYGGFTQWAAAARR-------- 122 (272)
T ss_dssp -EEEEEE--TTSTTS-S-B-TT----SHHHHHHHHHHH-HHHHHCT-TEEEEEEEEEETHHHHHHHHHHTTT--------
T ss_pred CEEEEEC-CcccccCCCccccC----ChhHHHHHHHHH-HHHHhCC-CCCCeEEeeccCHHHHHHHHHHhcC--------
Confidence 4688889 55999998765321 234445554444 3555555 4444799999999999988887621
Q ss_pred CCceeeeEeEecCCccCcc
Q 012236 200 KPLINLQGYILGNPKTDKI 218 (467)
Q Consensus 200 ~~~inLkGi~iGng~i~p~ 218 (467)
.-.||.|+..-+..|..
T Consensus 123 --~p~LkAi~p~~~~~d~~ 139 (272)
T PF02129_consen 123 --PPHLKAIVPQSGWSDLY 139 (272)
T ss_dssp ---TTEEEEEEESE-SBTC
T ss_pred --CCCceEEEecccCCccc
Confidence 12499999988887764
No 120
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=77.86 E-value=16 Score=43.47 Aligned_cols=103 Identities=16% Similarity=0.104 Sum_probs=68.5
Q ss_pred CCEEEEECCCCchHHHhHHHHhhCceEEeccCCCCCCCcceeCCCCcccCCceEEEecCCccccccccCCCCcccCchHH
Q 012236 70 DPLLLWLTGGPGCSAFSALVYEIGPINFNILEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGFSYVRTPLASQTGDFKQ 149 (467)
Q Consensus 70 ~p~~lwlnGGPG~Ss~~g~~~E~GP~~~~~~~~~~~~~~~~~n~~sW~~~an~l~iDqPvG~GfS~~~~~~~~~~~~~~~ 149 (467)
.|-++.++|+.|.+..+..+.+. + .....++-+|.| |.|-+ .. ...+.++.
T Consensus 1068 ~~~l~~lh~~~g~~~~~~~l~~~----------------l-------~~~~~v~~~~~~-g~~~~--~~---~~~~l~~l 1118 (1296)
T PRK10252 1068 GPTLFCFHPASGFAWQFSVLSRY----------------L-------DPQWSIYGIQSP-RPDGP--MQ---TATSLDEV 1118 (1296)
T ss_pred CCCeEEecCCCCchHHHHHHHHh----------------c-------CCCCcEEEEECC-CCCCC--CC---CCCCHHHH
Confidence 36688899999988776444421 1 123567788988 55533 11 12466788
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEeEecCCc
Q 012236 150 VHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGYILGNPK 214 (467)
Q Consensus 150 a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~iGng~ 214 (467)
|+++.+.++.. .| ..+++|.|+|+||.-+-.+|.++.++. ..+..+++-+++
T Consensus 1119 a~~~~~~i~~~---~~---~~p~~l~G~S~Gg~vA~e~A~~l~~~~-------~~v~~l~l~~~~ 1170 (1296)
T PRK10252 1119 CEAHLATLLEQ---QP---HGPYHLLGYSLGGTLAQGIAARLRARG-------EEVAFLGLLDTW 1170 (1296)
T ss_pred HHHHHHHHHhh---CC---CCCEEEEEechhhHHHHHHHHHHHHcC-------CceeEEEEecCC
Confidence 88887777642 23 358999999999999999988775542 245666665553
No 121
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=77.86 E-value=2 Score=39.67 Aligned_cols=59 Identities=27% Similarity=0.362 Sum_probs=39.5
Q ss_pred CCeEEEEcCCCccccCchhHHHHHHhcCCCCccCccceeeCCeeeeEEEEEecceEEEEEcCCcccccCCChHHHHHHHH
Q 012236 380 GYRSLIYSGDHDMVVPFLGTEAWIKSLNYSIIDDWRPWILHSQVAGYTRTYSNRMTYATVKGGGHIAPEYRPAECYAMFQ 459 (467)
Q Consensus 380 ~irVLiY~Gd~D~i~n~~Gt~~wi~~L~w~~~~~~~~w~~~~~~aG~~k~~~~~Ltf~~V~~AGHmvP~DqP~~a~~m~~ 459 (467)
+.+|++.+|+.|.++|....+...+.|+= .+.+++|.+..+.||-++ .+.+..+.
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~~---------------------~~~~v~~~~~~g~gH~i~----~~~~~~~~ 209 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLKA---------------------AGANVEFHEYPGGGHEIS----PEELRDLR 209 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHHC---------------------TT-GEEEEEETT-SSS------HHHHHHHH
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHHh---------------------cCCCEEEEEcCCCCCCCC----HHHHHHHH
Confidence 58999999999999999877666555430 112588899999999996 45566677
Q ss_pred HHHc
Q 012236 460 RWIN 463 (467)
Q Consensus 460 ~fl~ 463 (467)
+||.
T Consensus 210 ~~l~ 213 (216)
T PF02230_consen 210 EFLE 213 (216)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 7764
No 122
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=77.59 E-value=4.1 Score=34.30 Aligned_cols=44 Identities=20% Similarity=0.295 Sum_probs=33.6
Q ss_pred hcCCeEEEEcCCCccccCchhHHHHHHhcCCCCccCccceeeCCeeeeEEEEEecceEEEEEcCCccc
Q 012236 378 TKGYRSLIYSGDHDMVVPFLGTEAWIKSLNYSIIDDWRPWILHSQVAGYTRTYSNRMTYATVKGGGHI 445 (467)
Q Consensus 378 ~~~irVLiY~Gd~D~i~n~~Gt~~wi~~L~w~~~~~~~~w~~~~~~aG~~k~~~~~Ltf~~V~~AGHm 445 (467)
...++|++..|..|.+++....+++.++++ ..-.++.|.+|+|+
T Consensus 102 ~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~------------------------~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 102 KIRIPVLFIHGENDPLVPPEQVRRLYEALP------------------------GPKELYIIPGAGHF 145 (145)
T ss_dssp TTTSEEEEEEETT-SSSHHHHHHHHHHHHC------------------------SSEEEEEETTS-TT
T ss_pred ccCCcEEEEEECCCCcCCHHHHHHHHHHcC------------------------CCcEEEEeCCCcCc
Confidence 456899999999999999888888777755 12455889999995
No 123
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=76.87 E-value=6 Score=38.67 Aligned_cols=43 Identities=21% Similarity=0.269 Sum_probs=33.9
Q ss_pred CCeEEEEcCCCccccCchhHHHHHHhcCCCCccCccceeeCCeeeeEEEEEecceEEEEEcCCccccc
Q 012236 380 GYRSLIYSGDHDMVVPFLGTEAWIKSLNYSIIDDWRPWILHSQVAGYTRTYSNRMTYATVKGGGHIAP 447 (467)
Q Consensus 380 ~irVLiY~Gd~D~i~n~~Gt~~wi~~L~w~~~~~~~~w~~~~~~aG~~k~~~~~Ltf~~V~~AGHmvP 447 (467)
.+++||.+|+.|.+|+....+.+.+.+. +-.++++.++||+..
T Consensus 248 ~~P~lii~g~~D~~~p~~~~~~~~~~~~-------------------------~~~~~~~~~~gH~~~ 290 (306)
T TIGR01249 248 NIPTYIVHGRYDLCCPLQSAWALHKAFP-------------------------EAELKVTNNAGHSAF 290 (306)
T ss_pred CCCeEEEecCCCCCCCHHHHHHHHHhCC-------------------------CCEEEEECCCCCCCC
Confidence 5899999999999999987666655422 355678899999974
No 124
>PLN02753 triacylglycerol lipase
Probab=76.43 E-value=7.2 Score=40.86 Aligned_cols=73 Identities=15% Similarity=0.173 Sum_probs=50.6
Q ss_pred CchHHHHHHHHHHHHHHHHCCC--CCCCCeEEEeccCCccchHHHHHHHHhhcc--cCCCCceeeeEeEecCCccCc
Q 012236 145 GDFKQVHQVDQFLRKWLMDHPE--FLSNPFYVGGDSYSGITVPPLVQQISNENE--EGIKPLINLQGYILGNPKTDK 217 (467)
Q Consensus 145 ~~~~~a~~~~~fL~~F~~~fp~--~~~~~~~i~GESYgG~yvP~lA~~i~~~n~--~~~~~~inLkGi~iGng~i~p 217 (467)
+...+.+++.+.+++..+.+|. .....++|+|+|-||-.+--.|..|....- ......+++.-+..|.|-+..
T Consensus 285 ~k~S~reQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~Dla~~g~n~~~~~~~~pV~vyTFGsPRVGN 361 (531)
T PLN02753 285 AKFSAREQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYDIAEMGLNRSKKGKVIPVTVLTYGGPRVGN 361 (531)
T ss_pred chhhHHHHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHHHHHhcccccccCccCceEEEEeCCCCccC
Confidence 3456788899999999988863 234579999999999999999988865321 111123455666666665543
No 125
>COG0400 Predicted esterase [General function prediction only]
Probab=76.15 E-value=3.4 Score=38.13 Aligned_cols=60 Identities=27% Similarity=0.335 Sum_probs=42.6
Q ss_pred cCCeEEEEcCCCccccCchhHHHHHHhcCCCCccCccceeeCCeeeeEEEEEecceEEEEEcCCcccccCCChHHHHHHH
Q 012236 379 KGYRSLIYSGDHDMVVPFLGTEAWIKSLNYSIIDDWRPWILHSQVAGYTRTYSNRMTYATVKGGGHIAPEYRPAECYAMF 458 (467)
Q Consensus 379 ~~irVLiY~Gd~D~i~n~~Gt~~wi~~L~w~~~~~~~~w~~~~~~aG~~k~~~~~Ltf~~V~~AGHmvP~DqP~~a~~m~ 458 (467)
++.+|++.+|..|.+|+..-+++..+.|.=.+ .+..+.++. .||.++.+-= +-+
T Consensus 145 ~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g---------------------~~v~~~~~~-~GH~i~~e~~----~~~ 198 (207)
T COG0400 145 AGTPILLSHGTEDPVVPLALAEALAEYLTASG---------------------ADVEVRWHE-GGHEIPPEEL----EAA 198 (207)
T ss_pred CCCeEEEeccCcCCccCHHHHHHHHHHHHHcC---------------------CCEEEEEec-CCCcCCHHHH----HHH
Confidence 36899999999999999998888777654221 235556666 9999976544 444
Q ss_pred HHHHcC
Q 012236 459 QRWINH 464 (467)
Q Consensus 459 ~~fl~~ 464 (467)
++|+.+
T Consensus 199 ~~wl~~ 204 (207)
T COG0400 199 RSWLAN 204 (207)
T ss_pred HHHHHh
Confidence 556654
No 126
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=76.01 E-value=3.5 Score=37.58 Aligned_cols=63 Identities=22% Similarity=0.183 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHHHHH---CCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEeEecCCccCc
Q 012236 148 KQVHQVDQFLRKWLMD---HPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGYILGNPKTDK 217 (467)
Q Consensus 148 ~~a~~~~~fL~~F~~~---fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~iGng~i~p 217 (467)
+..+|..++++-..+. + ++...+++|+|+|=||+.+-.++..+.+... ..++++++..|++|.
T Consensus 47 ~~~~D~~~a~~~l~~~~~~~-~~d~~~i~l~G~SAGg~la~~~~~~~~~~~~------~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 47 AALEDVKAAYRWLLKNADKL-GIDPERIVLIGDSAGGHLALSLALRARDRGL------PKPKGIILISPWTDL 112 (211)
T ss_dssp HHHHHHHHHHHHHHHTHHHH-TEEEEEEEEEEETHHHHHHHHHHHHHHHTTT------CHESEEEEESCHSST
T ss_pred ccccccccceeeeccccccc-cccccceEEeecccccchhhhhhhhhhhhcc------cchhhhhcccccccc
Confidence 3344444444433332 2 1345689999999999999999988877531 248999999998876
No 127
>PLN02719 triacylglycerol lipase
Probab=74.83 E-value=8.4 Score=40.28 Aligned_cols=70 Identities=14% Similarity=0.163 Sum_probs=48.8
Q ss_pred hHHHHHHHHHHHHHHHHCCCC--CCCCeEEEeccCCccchHHHHHHHHhhccc--CCCCceeeeEeEecCCccC
Q 012236 147 FKQVHQVDQFLRKWLMDHPEF--LSNPFYVGGDSYSGITVPPLVQQISNENEE--GIKPLINLQGYILGNPKTD 216 (467)
Q Consensus 147 ~~~a~~~~~fL~~F~~~fp~~--~~~~~~i~GESYgG~yvP~lA~~i~~~n~~--~~~~~inLkGi~iGng~i~ 216 (467)
..+.+++...+++..+.+|.. ....+.|+|+|-||-.+--.|..|.+..-. .....+++.-+..|.|-|.
T Consensus 273 ~SaReQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~Dl~~~gln~~~~~~~~pVtvyTFGsPRVG 346 (518)
T PLN02719 273 FSAREQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYDVAEMGLNRTRKGKVIPVTAFTYGGPRVG 346 (518)
T ss_pred hhHHHHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHHHHHhcccccccccccceEEEEecCCCcc
Confidence 456778999999999999865 235799999999999999999888764210 1111234555666666554
No 128
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=74.40 E-value=25 Score=36.57 Aligned_cols=110 Identities=14% Similarity=0.203 Sum_probs=60.0
Q ss_pred eEEEEEEecCCCCCCCCEEEEECCCC---chHHH----hHHHHhhCceEEeccCCCCCCCcceeCCCCcccCCceEEEec
Q 012236 55 QLFYYFVKSEKNPKEDPLLLWLTGGP---GCSAF----SALVYEIGPINFNILEYNGSLPTLHLNPYSWTKEASILFVDS 127 (467)
Q Consensus 55 ~lfy~f~es~~~~~~~p~~lwlnGGP---G~Ss~----~g~~~E~GP~~~~~~~~~~~~~~~~~n~~sW~~~an~l~iDq 127 (467)
.||-=.+.-..+.+..||++|++||= |.+|. ...|.+.|=+.+..-+ ...+... |+|-
T Consensus 79 CL~LNIwaP~~~a~~~PVmV~IHGG~y~~Gs~s~~~ydgs~La~~g~vVvVSvN-------YRLG~lG--------fL~~ 143 (491)
T COG2272 79 CLYLNIWAPEVPAEKLPVMVYIHGGGYIMGSGSEPLYDGSALAARGDVVVVSVN-------YRLGALG--------FLDL 143 (491)
T ss_pred ceeEEeeccCCCCCCCcEEEEEeccccccCCCcccccChHHHHhcCCEEEEEeC-------cccccce--------eeeh
Confidence 46663222224566789999999995 55555 2566677755443211 2223333 4553
Q ss_pred CCccc--cccccCCCCcccCchHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHH
Q 012236 128 PVGTG--FSYVRTPLASQTGDFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPL 187 (467)
Q Consensus 128 PvG~G--fS~~~~~~~~~~~~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~l 187 (467)
+ ..+ .++.++ .+ -. ++++ -+++.++.++.|-.= ...+=|+|||=|++-|-.+
T Consensus 144 ~-~~~~~~~~~~n-~G--l~-Dqil--ALkWV~~NIe~FGGD-p~NVTl~GeSAGa~si~~L 197 (491)
T COG2272 144 S-SLDTEDAFASN-LG--LL-DQIL--ALKWVRDNIEAFGGD-PQNVTLFGESAGAASILTL 197 (491)
T ss_pred h-hcccccccccc-cc--HH-HHHH--HHHHHHHHHHHhCCC-ccceEEeeccchHHHHHHh
Confidence 4 111 111111 00 01 1221 357888888888533 2479999999988765443
No 129
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=73.69 E-value=4.5 Score=36.74 Aligned_cols=39 Identities=21% Similarity=0.229 Sum_probs=31.0
Q ss_pred CCCeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEeEecCCccCcccc
Q 012236 169 SNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGYILGNPKTDKIVD 220 (467)
Q Consensus 169 ~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~iGng~i~p~~q 220 (467)
...+.|.|-|-||.|+-.+|.+. +++. ++.||.+.|...
T Consensus 58 ~~~~~liGSSlGG~~A~~La~~~------------~~~a-vLiNPav~p~~~ 96 (187)
T PF05728_consen 58 PENVVLIGSSLGGFYATYLAERY------------GLPA-VLINPAVRPYEL 96 (187)
T ss_pred CCCeEEEEEChHHHHHHHHHHHh------------CCCE-EEEcCCCCHHHH
Confidence 34599999999999999998754 3566 677999998643
No 130
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=73.10 E-value=13 Score=34.91 Aligned_cols=86 Identities=16% Similarity=0.198 Sum_probs=58.4
Q ss_pred ceEEEecCCccccccccCCCCcccCchHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCC
Q 012236 121 SILFVDSPVGTGFSYVRTPLASQTGDFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIK 200 (467)
Q Consensus 121 n~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~ 200 (467)
+...|+-|.+.+-=.+-....+..+..+.++.+.+.+..+.. ..+++.|+|.|-|+.-+-....++.+.....
T Consensus 4 ~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~-----~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~-- 76 (225)
T PF08237_consen 4 NVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIA-----AGGPVVVFGYSQGAVVASNVLRRLAADGDPP-- 76 (225)
T ss_pred ceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhcc-----CCCCEEEEEECHHHHHHHHHHHHHHhcCCCC--
Confidence 456677776443311111112345667788888888887655 4789999999999988888888887743211
Q ss_pred CceeeeEeEecCCc
Q 012236 201 PLINLQGYILGNPK 214 (467)
Q Consensus 201 ~~inLkGi~iGng~ 214 (467)
.-+++.|.+||+-
T Consensus 77 -~~~l~fVl~gnP~ 89 (225)
T PF08237_consen 77 -PDDLSFVLIGNPR 89 (225)
T ss_pred -cCceEEEEecCCC
Confidence 1368999999985
No 131
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=72.76 E-value=5.8 Score=40.10 Aligned_cols=67 Identities=19% Similarity=0.284 Sum_probs=41.0
Q ss_pred CCceEEEe-------cCCccccccccCCC-CcccCchHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHH
Q 012236 119 EASILFVD-------SPVGTGFSYVRTPL-ASQTGDFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLV 188 (467)
Q Consensus 119 ~an~l~iD-------qPvG~GfS~~~~~~-~~~~~~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA 188 (467)
.|-|||+| +|.|.- ||.+... +|- +.+|+=.|+-. |..++++..-=+..|+..+|-||||+...-+-
T Consensus 111 ~AllVFaEHRyYGeS~PFG~~-s~k~~~hlgyL-tseQALADfA~-ll~~lK~~~~a~~~pvIafGGSYGGMLaAWfR 185 (492)
T KOG2183|consen 111 KALLVFAEHRYYGESLPFGSQ-SYKDARHLGYL-TSEQALADFAE-LLTFLKRDLSAEASPVIAFGGSYGGMLAAWFR 185 (492)
T ss_pred CceEEEeehhccccCCCCcch-hccChhhhccc-cHHHHHHHHHH-HHHHHhhccccccCcEEEecCchhhHHHHHHH
Confidence 35677776 687777 5544321 343 33455555544 44455655444567999999999997664443
No 132
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=72.37 E-value=25 Score=36.20 Aligned_cols=36 Identities=11% Similarity=0.109 Sum_probs=25.8
Q ss_pred CCeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEeEecCCcc
Q 012236 170 NPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGYILGNPKT 215 (467)
Q Consensus 170 ~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~iGng~i 215 (467)
....|+|.|+||.-.-++|-+-.+ .+.+++..+|-+
T Consensus 288 ~~~~IaG~S~GGl~AL~~al~~Pd----------~Fg~v~s~Sgs~ 323 (411)
T PRK10439 288 DRTVVAGQSFGGLAALYAGLHWPE----------RFGCVLSQSGSF 323 (411)
T ss_pred cceEEEEEChHHHHHHHHHHhCcc----------cccEEEEeccce
Confidence 358999999999888877754222 367777777643
No 133
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=72.03 E-value=2.5 Score=38.63 Aligned_cols=73 Identities=15% Similarity=0.048 Sum_probs=52.4
Q ss_pred ccccccccCCCCcccCchHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEeE
Q 012236 130 GTGFSYVRTPLASQTGDFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGYI 209 (467)
Q Consensus 130 G~GfS~~~~~~~~~~~~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~ 209 (467)
-|||-+.+.. ++.++.-.++.++++--++.+|.-+ .+-+.|+|=|.|.+-.+..++.+ -.+.|++
T Consensus 102 svgY~l~~q~----htL~qt~~~~~~gv~filk~~~n~k--~l~~gGHSaGAHLa~qav~R~r~---------prI~gl~ 166 (270)
T KOG4627|consen 102 SVGYNLCPQV----HTLEQTMTQFTHGVNFILKYTENTK--VLTFGGHSAGAHLAAQAVMRQRS---------PRIWGLI 166 (270)
T ss_pred EeccCcCccc----ccHHHHHHHHHHHHHHHHHhcccce--eEEEcccchHHHHHHHHHHHhcC---------chHHHHH
Confidence 4566655432 5778888899999887777887533 49999999999887777766432 1378888
Q ss_pred ecCCccCc
Q 012236 210 LGNPKTDK 217 (467)
Q Consensus 210 iGng~i~p 217 (467)
+-.|+-+-
T Consensus 167 l~~GvY~l 174 (270)
T KOG4627|consen 167 LLCGVYDL 174 (270)
T ss_pred HHhhHhhH
Confidence 88887654
No 134
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=71.87 E-value=6.6 Score=36.99 Aligned_cols=67 Identities=16% Similarity=0.145 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEeEecCCccCcc
Q 012236 148 KQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGYILGNPKTDKI 218 (467)
Q Consensus 148 ~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~iGng~i~p~ 218 (467)
..+..|.+||+...+.. ...+++|.+||-|++-+-..-..+...... ....-+|..|++.+|-+|.+
T Consensus 74 ~s~~~l~~~L~~L~~~~---~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~-~~~~~~~~~viL~ApDid~d 140 (233)
T PF05990_consen 74 FSGPALARFLRDLARAP---GIKRIHILAHSMGNRVLLEALRQLASEGER-PDVKARFDNVILAAPDIDND 140 (233)
T ss_pred HHHHHHHHHHHHHHhcc---CCceEEEEEeCchHHHHHHHHHHHHhcccc-hhhHhhhheEEEECCCCCHH
Confidence 44556666666554432 256899999999999988877777665431 01123789999999998875
No 135
>PRK13604 luxD acyl transferase; Provisional
Probab=71.46 E-value=7.1 Score=38.33 Aligned_cols=45 Identities=11% Similarity=0.125 Sum_probs=37.5
Q ss_pred CCeEEEEcCCCccccCchhHHHHHHhcCCCCccCccceeeCCeeeeEEEEEecceEEEEEcCCccccc
Q 012236 380 GYRSLIYSGDHDMVVPFLGTEAWIKSLNYSIIDDWRPWILHSQVAGYTRTYSNRMTYATVKGGGHIAP 447 (467)
Q Consensus 380 ~irVLiY~Gd~D~i~n~~Gt~~wi~~L~w~~~~~~~~w~~~~~~aG~~k~~~~~Ltf~~V~~AGHmvP 447 (467)
+.+||+++|+.|.+|+..+.+.+.++++ . ..-.++.+.||+|...
T Consensus 202 ~~PvLiIHG~~D~lVp~~~s~~l~e~~~----------------------s-~~kkl~~i~Ga~H~l~ 246 (307)
T PRK13604 202 DIPFIAFTANNDSWVKQSEVIDLLDSIR----------------------S-EQCKLYSLIGSSHDLG 246 (307)
T ss_pred CCCEEEEEcCCCCccCHHHHHHHHHHhc----------------------c-CCcEEEEeCCCccccC
Confidence 4899999999999999999998887743 1 2467789999999864
No 136
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=70.97 E-value=8.5 Score=39.94 Aligned_cols=41 Identities=10% Similarity=0.071 Sum_probs=31.8
Q ss_pred hHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHH
Q 012236 147 FKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQ 190 (467)
Q Consensus 147 ~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~ 190 (467)
++..+++.+.+.+.++..+ .++++|.|+|.||..+-.++..
T Consensus 142 ~~~~~~Lk~lIe~~~~~~g---~~kV~LVGHSMGGlva~~fl~~ 182 (440)
T PLN02733 142 PETMDGLKKKLETVYKASG---GKKVNIISHSMGGLLVKCFMSL 182 (440)
T ss_pred HHHHHHHHHHHHHHHHHcC---CCCEEEEEECHhHHHHHHHHHH
Confidence 4556778888888777654 5799999999999888776653
No 137
>KOG3101 consensus Esterase D [General function prediction only]
Probab=70.80 E-value=34 Score=31.65 Aligned_cols=143 Identities=16% Similarity=0.140 Sum_probs=71.0
Q ss_pred eEEE-EEEec-CCCCCCCCEEEEECCCCchHHH--------hHHHHhhCceEEeccCCCCCCCcceeCCCCcccCCceEE
Q 012236 55 QLFY-YFVKS-EKNPKEDPLLLWLTGGPGCSAF--------SALVYEIGPINFNILEYNGSLPTLHLNPYSWTKEASILF 124 (467)
Q Consensus 55 ~lfy-~f~es-~~~~~~~p~~lwlnGGPG~Ss~--------~g~~~E~GP~~~~~~~~~~~~~~~~~n~~sW~~~an~l~ 124 (467)
.|=| .|++. ..+.+.-|+++||.|= -|.-. --.-.++|=..+.+|.+.-+ -.+.-.+.||
T Consensus 27 ~Mtf~vylPp~a~~~k~~P~lf~LSGL-TCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG-~~v~g~~esw-------- 96 (283)
T KOG3101|consen 27 SMTFGVYLPPDAPRGKRCPVLFYLSGL-TCTHENFIEKSGFQQQASKHGLAVVAPDTSPRG-VEVAGDDESW-------- 96 (283)
T ss_pred ceEEEEecCCCcccCCcCceEEEecCC-cccchhhHhhhhHHHhHhhcCeEEECCCCCCCc-cccCCCcccc--------
Confidence 4555 55553 2334457999999863 34321 11223466666666532111 1233345577
Q ss_pred EecCCccccccccCCCCcccCchHHHHHHHHHHHHHHH-HCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCce
Q 012236 125 VDSPVGTGFSYVRTPLASQTGDFKQVHQVDQFLRKWLM-DHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLI 203 (467)
Q Consensus 125 iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fL~~F~~-~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~i 203 (467)
|==.|.||=-..+..... ..-..-+.+.+=|-+-+. .+-.+-..+.-|+|+|.|||=+-.++-+ | .-
T Consensus 97 -DFG~GAGFYvnAt~epw~-~~yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lk----n------~~ 164 (283)
T KOG3101|consen 97 -DFGQGAGFYVNATQEPWA-KHYRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLK----N------PS 164 (283)
T ss_pred -cccCCceeEEecccchHh-hhhhHHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEc----C------cc
Confidence 334566663222211111 111122222222222222 2212333468999999999966554422 2 11
Q ss_pred eeeEeEecCCccCccc
Q 012236 204 NLQGYILGNPKTDKIV 219 (467)
Q Consensus 204 nLkGi~iGng~i~p~~ 219 (467)
..|+|..-.|.++|..
T Consensus 165 kykSvSAFAPI~NP~~ 180 (283)
T KOG3101|consen 165 KYKSVSAFAPICNPIN 180 (283)
T ss_pred cccceeccccccCccc
Confidence 4788888888888864
No 138
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=69.85 E-value=21 Score=31.79 Aligned_cols=76 Identities=13% Similarity=0.152 Sum_probs=48.2
Q ss_pred CCceEEEecCCccccccccCCCCcccCchHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccC
Q 012236 119 EASILFVDSPVGTGFSYVRTPLASQTGDFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEG 198 (467)
Q Consensus 119 ~an~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~ 198 (467)
...++-+|.| |.|.+.. ...+.+..++.....++. ..+ ..++.++|+|+||..+-.+|.++.+...
T Consensus 25 ~~~v~~~~~~-g~~~~~~-----~~~~~~~~~~~~~~~l~~---~~~---~~~~~l~g~s~Gg~~a~~~a~~l~~~~~-- 90 (212)
T smart00824 25 RRDVSALPLP-GFGPGEP-----LPASADALVEAQAEAVLR---AAG---GRPFVLVGHSSGGLLAHAVAARLEARGI-- 90 (212)
T ss_pred CccEEEecCC-CCCCCCC-----CCCCHHHHHHHHHHHHHH---hcC---CCCeEEEEECHHHHHHHHHHHHHHhCCC--
Confidence 3578889977 5554321 122444555555554442 333 4689999999999999999988765421
Q ss_pred CCCceeeeEeEecCC
Q 012236 199 IKPLINLQGYILGNP 213 (467)
Q Consensus 199 ~~~~inLkGi~iGng 213 (467)
.++++++.++
T Consensus 91 -----~~~~l~~~~~ 100 (212)
T smart00824 91 -----PPAAVVLLDT 100 (212)
T ss_pred -----CCcEEEEEcc
Confidence 3566665554
No 139
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=69.45 E-value=5.5 Score=41.22 Aligned_cols=67 Identities=16% Similarity=0.158 Sum_probs=44.8
Q ss_pred CchHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEeEecCCccCccccc
Q 012236 145 GDFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGYILGNPKTDKIVDK 221 (467)
Q Consensus 145 ~~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~iGng~i~p~~q~ 221 (467)
+.+|+-+|+..|++.+-..+....+.|+.++|=||||..+.-+..+--+ -+.|..--.|-+....+.
T Consensus 88 t~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~----------~~~ga~ASSapv~a~~df 154 (434)
T PF05577_consen 88 TSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPH----------LFDGAWASSAPVQAKVDF 154 (434)
T ss_dssp SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TT----------T-SEEEEET--CCHCCTT
T ss_pred CHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCC----------eeEEEEeccceeeeeccc
Confidence 5678999999999998777766677899999999999776665544322 156666666666655443
No 140
>PLN02761 lipase class 3 family protein
Probab=68.64 E-value=14 Score=38.73 Aligned_cols=71 Identities=14% Similarity=0.062 Sum_probs=48.7
Q ss_pred hHHHHHHHHHHHHHHHHCCCC-C--CCCeEEEeccCCccchHHHHHHHHhhccc---CCCCceeeeEeEecCCccCc
Q 012236 147 FKQVHQVDQFLRKWLMDHPEF-L--SNPFYVGGDSYSGITVPPLVQQISNENEE---GIKPLINLQGYILGNPKTDK 217 (467)
Q Consensus 147 ~~~a~~~~~fL~~F~~~fp~~-~--~~~~~i~GESYgG~yvP~lA~~i~~~n~~---~~~~~inLkGi~iGng~i~p 217 (467)
..+.+++...++...+.+|.. + .-.++|+|+|-||-.+--.|..|...+-. .....+++.-+..|.|=|..
T Consensus 268 ~SaR~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~DIa~~gln~~~~~~~~~PVtv~TFGsPRVGN 344 (527)
T PLN02761 268 FSAREQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYDIAELNLNHVPENNYKIPITVFSFSGPRVGN 344 (527)
T ss_pred hhHHHHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHHHHHhccccccccccCCceEEEEcCCCCcCC
Confidence 356778999999998888642 1 23599999999999999888888653211 01223456666666665543
No 141
>PLN02324 triacylglycerol lipase
Probab=68.53 E-value=16 Score=37.41 Aligned_cols=47 Identities=13% Similarity=0.012 Sum_probs=38.7
Q ss_pred hHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhh
Q 012236 147 FKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNE 194 (467)
Q Consensus 147 ~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~ 194 (467)
..+.+++..-|+++.+.+|.. ...+.|+|||-||-.+--.|..|...
T Consensus 193 ~SareqVl~eV~~L~~~Yp~e-~~sItvTGHSLGGALAtLaA~dl~~~ 239 (415)
T PLN02324 193 TSAQEQVQGELKRLLELYKNE-EISITFTGHSLGAVMSVLSAADLVYG 239 (415)
T ss_pred hHHHHHHHHHHHHHHHHCCCC-CceEEEecCcHHHHHHHHHHHHHHHh
Confidence 457778899999999888843 24799999999999999888888763
No 142
>PRK10985 putative hydrolase; Provisional
Probab=68.02 E-value=11 Score=37.22 Aligned_cols=114 Identities=15% Similarity=0.114 Sum_probs=58.3
Q ss_pred EEecCCCCceEEEEEEecCCCCCCCCEEEEECCCCchHHH-hH-HHHhhCceEEeccCCCCCCCcceeCCCCcccCCceE
Q 012236 46 VGVGESEDAQLFYYFVKSEKNPKEDPLLLWLTGGPGCSAF-SA-LVYEIGPINFNILEYNGSLPTLHLNPYSWTKEASIL 123 (467)
Q Consensus 46 ~~~~~~~~~~lfy~f~es~~~~~~~p~~lwlnGGPG~Ss~-~g-~~~E~GP~~~~~~~~~~~~~~~~~n~~sW~~~an~l 123 (467)
++..+ +..+.+++.+....+.++|+||.++|.+|++.. .. .+.+ . +. .+-.+++
T Consensus 36 ~~~~d--g~~~~l~w~~~~~~~~~~p~vll~HG~~g~~~~~~~~~~~~---~-------------l~------~~G~~v~ 91 (324)
T PRK10985 36 LELPD--GDFVDLAWSEDPAQARHKPRLVLFHGLEGSFNSPYAHGLLE---A-------------AQ------KRGWLGV 91 (324)
T ss_pred EECCC--CCEEEEecCCCCccCCCCCEEEEeCCCCCCCcCHHHHHHHH---H-------------HH------HCCCEEE
Confidence 44443 455554444333334568999999999997542 11 0110 0 11 0113566
Q ss_pred EEecCCccccccccCCCCcccCchHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHH
Q 012236 124 FVDSPVGTGFSYVRTPLASQTGDFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQ 190 (467)
Q Consensus 124 ~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~ 190 (467)
-+|.+ |.|=|-......+.... .+|+..+++..-+.++ ..++++.|+|.||..+-..+.+
T Consensus 92 ~~d~r-G~g~~~~~~~~~~~~~~---~~D~~~~i~~l~~~~~---~~~~~~vG~S~GG~i~~~~~~~ 151 (324)
T PRK10985 92 VMHFR-GCSGEPNRLHRIYHSGE---TEDARFFLRWLQREFG---HVPTAAVGYSLGGNMLACLLAK 151 (324)
T ss_pred EEeCC-CCCCCccCCcceECCCc---hHHHHHHHHHHHHhCC---CCCEEEEEecchHHHHHHHHHh
Confidence 67876 65533221111121112 2344444433223444 4689999999999875554443
No 143
>COG4099 Predicted peptidase [General function prediction only]
Probab=66.60 E-value=89 Score=30.59 Aligned_cols=120 Identities=21% Similarity=0.224 Sum_probs=61.6
Q ss_pred CCCCceEEEEEEecC-CCC--CCCCEEEEECCCCchHHH-h-HHHHhhCceEEeccCCCCCCCcceeCCCCcccCCceEE
Q 012236 50 ESEDAQLFYYFVKSE-KNP--KEDPLLLWLTGGPGCSAF-S-ALVYEIGPINFNILEYNGSLPTLHLNPYSWTKEASILF 124 (467)
Q Consensus 50 ~~~~~~lfy~f~es~-~~~--~~~p~~lwlnGGPG~Ss~-~-g~~~E~GP~~~~~~~~~~~~~~~~~n~~sW~~~an~l~ 124 (467)
++.+..|=|-||..+ -+| +.-||||||+|+=-.++- . -+..-.|-..+.. .-.=.|
T Consensus 168 ~~tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~~~l~sg~gaiawa~-------------------pedqcf 228 (387)
T COG4099 168 ESTGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDNDKVLSSGIGAIAWAG-------------------PEDQCF 228 (387)
T ss_pred cccCceeeEEEecccccCCCCccccEEEEEecCCCCCchhhhhhhcCccceeeec-------------------ccCceE
Confidence 346778999877653 222 334999999997433332 1 2222233322221 111144
Q ss_pred EecCCccccccccCCCCcccCchHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHh
Q 012236 125 VDSPVGTGFSYVRTPLASQTGDFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISN 193 (467)
Q Consensus 125 iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~ 193 (467)
|=.|= |+-.-.+.+- .++ .-=......+.+-+...+..-.+.+|++|-|=||.-.=+++.+.-+
T Consensus 229 VlAPQ---y~~if~d~e~-~t~-~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPd 292 (387)
T COG4099 229 VLAPQ---YNPIFADSEE-KTL-LYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPD 292 (387)
T ss_pred EEccc---cccccccccc-ccc-hhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCch
Confidence 44452 3321111110 011 0111123344433445666777899999999999887777765444
No 144
>COG4425 Predicted membrane protein [Function unknown]
Probab=66.48 E-value=15 Score=37.67 Aligned_cols=36 Identities=11% Similarity=0.217 Sum_probs=30.7
Q ss_pred hHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCcc
Q 012236 147 FKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGI 182 (467)
Q Consensus 147 ~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~ 182 (467)
.++|+.+++..-.....-|+=..-++|+.|||-|..
T Consensus 374 ~~aa~aLf~aVy~yw~qLP~~sRPKLylhG~SLGa~ 409 (588)
T COG4425 374 ADAARALFEAVYGYWTQLPKSSRPKLYLHGESLGAM 409 (588)
T ss_pred hhHHHHHHHHHHHHHHhCCcCCCCceEEeccccccc
Confidence 578888999998888999987777799999998754
No 145
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=66.08 E-value=12 Score=36.66 Aligned_cols=65 Identities=15% Similarity=0.206 Sum_probs=52.5
Q ss_pred hcCCeEEEEcCCCccccC-chhHHHHHHhcCCCCccCccceeeCCeeeeEEEEEecceEEEEEcCCcccccCCCh---HH
Q 012236 378 TKGYRSLIYSGDHDMVVP-FLGTEAWIKSLNYSIIDDWRPWILHSQVAGYTRTYSNRMTYATVKGGGHIAPEYRP---AE 453 (467)
Q Consensus 378 ~~~irVLiY~Gd~D~i~n-~~Gt~~wi~~L~w~~~~~~~~w~~~~~~aG~~k~~~~~Ltf~~V~~AGHmvP~DqP---~~ 453 (467)
...++|||.+|..|.++. ..+..++.++++ . .+.+++.+.||-|.+-.+.+ +.
T Consensus 226 ~~~~PvLll~g~~D~vv~~~~~~~~~~~~~~----------------------~-~~~~~~~~~g~~He~~~E~~~~r~~ 282 (298)
T COG2267 226 AIALPVLLLQGGDDRVVDNVEGLARFFERAG----------------------S-PDKELKVIPGAYHELLNEPDRAREE 282 (298)
T ss_pred cccCCEEEEecCCCccccCcHHHHHHHHhcC----------------------C-CCceEEecCCcchhhhcCcchHHHH
Confidence 347999999999999999 588888887765 1 23677899999999987765 57
Q ss_pred HHHHHHHHHcCC
Q 012236 454 CYAMFQRWINHD 465 (467)
Q Consensus 454 a~~m~~~fl~~~ 465 (467)
+++-+..|+...
T Consensus 283 ~~~~~~~~l~~~ 294 (298)
T COG2267 283 VLKDILAWLAEA 294 (298)
T ss_pred HHHHHHHHHHhh
Confidence 888888888654
No 146
>PRK04940 hypothetical protein; Provisional
Probab=66.04 E-value=16 Score=32.91 Aligned_cols=37 Identities=11% Similarity=-0.011 Sum_probs=30.1
Q ss_pred CCeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEeEecCCccCccc
Q 012236 170 NPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGYILGNPKTDKIV 219 (467)
Q Consensus 170 ~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~iGng~i~p~~ 219 (467)
.++.|.|-|-||.|+-.+|.+- .++.| |.||.+.|..
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~------------g~~aV-LiNPAv~P~~ 96 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLC------------GIRQV-IFNPNLFPEE 96 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHH------------CCCEE-EECCCCChHH
Confidence 4799999999999999999752 46665 5699999964
No 147
>COG0400 Predicted esterase [General function prediction only]
Probab=65.30 E-value=40 Score=31.14 Aligned_cols=79 Identities=14% Similarity=-0.011 Sum_probs=52.6
Q ss_pred chHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEeEecCCccCcccc---cc
Q 012236 146 DFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGYILGNPKTDKIVD---KN 222 (467)
Q Consensus 146 ~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~iGng~i~p~~q---~~ 222 (467)
....++.+.+||....+.+. ...+++++.|-|=|+.++-++.-+- +-.++|+++-.|..-+..+ ..
T Consensus 76 l~~~~~~~~~~l~~~~~~~g-i~~~~ii~~GfSqGA~ial~~~l~~----------~~~~~~ail~~g~~~~~~~~~~~~ 144 (207)
T COG0400 76 LDLETEKLAEFLEELAEEYG-IDSSRIILIGFSQGANIALSLGLTL----------PGLFAGAILFSGMLPLEPELLPDL 144 (207)
T ss_pred HHHHHHHHHHHHHHHHHHhC-CChhheEEEecChHHHHHHHHHHhC----------chhhccchhcCCcCCCCCcccccc
Confidence 34555667788888777764 4467899999999998877666432 1258888888888765532 23
Q ss_pred cccccccccCCCC
Q 012236 223 SQIPFAHGMGLIS 235 (467)
Q Consensus 223 ~~~~~~~~~gli~ 235 (467)
.-.+.+..||--|
T Consensus 145 ~~~pill~hG~~D 157 (207)
T COG0400 145 AGTPILLSHGTED 157 (207)
T ss_pred CCCeEEEeccCcC
Confidence 3445555666433
No 148
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=64.53 E-value=8.3 Score=41.03 Aligned_cols=85 Identities=8% Similarity=-0.076 Sum_probs=50.3
Q ss_pred CceEEEecCCccccccccCCCCcccCchHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCC
Q 012236 120 ASILFVDSPVGTGFSYVRTPLASQTGDFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGI 199 (467)
Q Consensus 120 an~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~ 199 (467)
..++-||-+ |.|.|..... -++-+.+.+.++|..+.+.. ...++++.|.|-||..+-..+........
T Consensus 221 f~V~~iDwr-gpg~s~~~~~-----~ddY~~~~i~~al~~v~~~~---g~~kv~lvG~cmGGtl~a~ala~~aa~~~--- 288 (532)
T TIGR01838 221 HTVFVISWR-NPDASQADKT-----FDDYIRDGVIAALEVVEAIT---GEKQVNCVGYCIGGTLLSTALAYLAARGD--- 288 (532)
T ss_pred cEEEEEECC-CCCcccccCC-----hhhhHHHHHHHHHHHHHHhc---CCCCeEEEEECcCcHHHHHHHHHHHHhCC---
Confidence 467778865 7776643211 11233344666666655443 35689999999999987653322222110
Q ss_pred CCceeeeEeEecCCccCcc
Q 012236 200 KPLINLQGYILGNPKTDKI 218 (467)
Q Consensus 200 ~~~inLkGi~iGng~i~p~ 218 (467)
.-.++++++.+..+|..
T Consensus 289 --~~rv~slvll~t~~Df~ 305 (532)
T TIGR01838 289 --DKRIKSATFFTTLLDFS 305 (532)
T ss_pred --CCccceEEEEecCcCCC
Confidence 01378888888777754
No 149
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=64.53 E-value=11 Score=35.85 Aligned_cols=107 Identities=19% Similarity=0.235 Sum_probs=67.1
Q ss_pred CCCCEEEEECCCCchH-HHhHHHHhhCceEEeccCCCCCCCcceeCCCCcccCCceEEEecCCccccccccCCCCcccCc
Q 012236 68 KEDPLLLWLTGGPGCS-AFSALVYEIGPINFNILEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGFSYVRTPLASQTGD 146 (467)
Q Consensus 68 ~~~p~~lwlnGGPG~S-s~~g~~~E~GP~~~~~~~~~~~~~~~~~n~~sW~~~an~l~iDqPvG~GfS~~~~~~~~~~~~ 146 (467)
...+.+|+.+|=-.-= -|.-+|.|.+= .=..|+.=.|-- |.|.|.++... .+.
T Consensus 58 ~~~~~lly~hGNa~Dlgq~~~~~~~l~~----------------------~ln~nv~~~DYS-GyG~S~G~psE---~n~ 111 (258)
T KOG1552|consen 58 AAHPTLLYSHGNAADLGQMVELFKELSI----------------------FLNCNVVSYDYS-GYGRSSGKPSE---RNL 111 (258)
T ss_pred ccceEEEEcCCcccchHHHHHHHHHHhh----------------------cccceEEEEecc-cccccCCCccc---ccc
Confidence 3459999998761111 33444443322 224567777866 99999887543 244
Q ss_pred hHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEeEecCCccCc
Q 012236 147 FKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGYILGNPKTDK 217 (467)
Q Consensus 147 ~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~iGng~i~p 217 (467)
-+..+..+++|++ ++- +..++.|.|.|-|-.=--.+|.+ ..+.|+++-+|+++-
T Consensus 112 y~Di~avye~Lr~---~~g--~~~~Iil~G~SiGt~~tv~Lasr------------~~~~alVL~SPf~S~ 165 (258)
T KOG1552|consen 112 YADIKAVYEWLRN---RYG--SPERIILYGQSIGTVPTVDLASR------------YPLAAVVLHSPFTSG 165 (258)
T ss_pred hhhHHHHHHHHHh---hcC--CCceEEEEEecCCchhhhhHhhc------------CCcceEEEeccchhh
Confidence 4455667788875 331 35689999999986543333322 128999998888764
No 150
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=63.49 E-value=46 Score=31.62 Aligned_cols=39 Identities=21% Similarity=0.364 Sum_probs=26.6
Q ss_pred CchHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHH
Q 012236 145 GDFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLV 188 (467)
Q Consensus 145 ~~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA 188 (467)
+.++.-+.=.+|++++. | +++++||.|+|=|..++-.+-
T Consensus 90 sL~~QV~HKlaFik~~~---P--k~~ki~iiGHSiGaYm~Lqil 128 (301)
T KOG3975|consen 90 SLQDQVDHKLAFIKEYV---P--KDRKIYIIGHSIGAYMVLQIL 128 (301)
T ss_pred chhhHHHHHHHHHHHhC---C--CCCEEEEEecchhHHHHHHHh
Confidence 44555566667777654 3 478999999999876554443
No 151
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=63.22 E-value=77 Score=30.76 Aligned_cols=89 Identities=11% Similarity=0.147 Sum_probs=51.9
Q ss_pred hHHHHHHhhhcCCeEEEEcCCCccccCchhHHHHHHhcCCCCccCcccee--eCC---eee-eEEEEEecceEEEEEcCC
Q 012236 369 SFSFHVSLSTKGYRSLIYSGDHDMVVPFLGTEAWIKSLNYSIIDDWRPWI--LHS---QVA-GYTRTYSNRMTYATVKGG 442 (467)
Q Consensus 369 ~~~~~~~LL~~~irVLiY~Gd~D~i~n~~Gt~~wi~~L~w~~~~~~~~w~--~~~---~~a-G~~k~~~~~Ltf~~V~~A 442 (467)
-.+.+..+-++.+||||-.|-.|.++--.=.++.+... ++.+.|.--. .+. ++. -+. + ++.-.-|.+.+-
T Consensus 201 q~~~I~~ln~~~ikvli~ygg~DhLIEeeI~~E~a~~f--~~l~Hf~~~~~~seee~~kI~~~f~-~-~~~~~sv~f~~d 276 (297)
T PF06342_consen 201 QKEYIDKLNKKPIKVLIAYGGKDHLIEEEISFEFAMKF--KGLDHFNIEKEISEEEKPKILKSFA-S-GQKGASVFFAKD 276 (297)
T ss_pred HHHHHHHhccCCCcEEEEEcCcchhhHHHHHHHHHHHh--CCccceeeecCCChhHHHHHHHHHh-c-CCceeEEEEecC
Confidence 45667777788899999999999988766555554433 3322221100 000 010 010 0 122444778899
Q ss_pred cccccCCChHHHHHHHHHH
Q 012236 443 GHIAPEYRPAECYAMFQRW 461 (467)
Q Consensus 443 GHmvP~DqP~~a~~m~~~f 461 (467)
||...-.||+-.-+.+...
T Consensus 277 gHf~qK~~A~lIA~~i~~m 295 (297)
T PF06342_consen 277 GHFQQKFRADLIAEAIKKM 295 (297)
T ss_pred ChHHhHHHHHHHHHHHHHh
Confidence 9999999987655555443
No 152
>PRK14567 triosephosphate isomerase; Provisional
Probab=61.49 E-value=20 Score=34.16 Aligned_cols=61 Identities=20% Similarity=0.335 Sum_probs=45.7
Q ss_pred hHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEeEecCCccCcc
Q 012236 147 FKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGYILGNPKTDKI 218 (467)
Q Consensus 147 ~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~iGng~i~p~ 218 (467)
.+.++++..++++++..+-+-....+-|. |||---|.=+..|++.. ++.|++||.+-+++.
T Consensus 178 ~e~i~~~~~~IR~~l~~~~~~~a~~v~Il---YGGSV~~~N~~~l~~~~--------diDG~LVGgasL~~~ 238 (253)
T PRK14567 178 LEQIQETHQFIRSLLAKVDERLAKNIKIV---YGGSLKAENAKDILSLP--------DVDGGLIGGASLKAA 238 (253)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccceEE---EcCcCCHHHHHHHHcCC--------CCCEEEeehhhhcHH
Confidence 46778899999999876421111223333 89999999999998864 589999999999875
No 153
>PRK14566 triosephosphate isomerase; Provisional
Probab=61.32 E-value=22 Score=34.09 Aligned_cols=61 Identities=20% Similarity=0.407 Sum_probs=45.8
Q ss_pred hHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEeEecCCccCcc
Q 012236 147 FKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGYILGNPKTDKI 218 (467)
Q Consensus 147 ~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~iGng~i~p~ 218 (467)
.+.|++++.||++++...-......+=|. |||.--|.-+..|++.. ++.|++||..-+++.
T Consensus 188 ~e~a~~v~~~IR~~l~~~~~~~a~~~rIl---YGGSV~~~N~~~l~~~~--------dIDG~LVGgASL~~~ 248 (260)
T PRK14566 188 PEQAQEVHAFIRKRLSEVSPFIGENIRIL---YGGSVTPSNAADLFAQP--------DVDGGLIGGASLNST 248 (260)
T ss_pred HHHHHHHHHHHHHHHHhcCccccccceEE---ecCCCCHhHHHHHhcCC--------CCCeEEechHhcCHH
Confidence 35678899999999865411111223333 99999999999998865 589999999999885
No 154
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=58.77 E-value=22 Score=33.32 Aligned_cols=52 Identities=17% Similarity=0.146 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEeEecCC
Q 012236 152 QVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGYILGNP 213 (467)
Q Consensus 152 ~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~iGng 213 (467)
.-.+++++..+.+++ +++|+|||=||..+-+.|..+-+..+ -.++.+..-||
T Consensus 70 ~A~~yl~~~~~~~~~----~i~v~GHSkGGnLA~yaa~~~~~~~~------~rI~~vy~fDg 121 (224)
T PF11187_consen 70 SALAYLKKIAKKYPG----KIYVTGHSKGGNLAQYAAANCDDEIQ------DRISKVYSFDG 121 (224)
T ss_pred HHHHHHHHHHHhCCC----CEEEEEechhhHHHHHHHHHccHHHh------hheeEEEEeeC
Confidence 344667766666663 69999999999999999988654322 13556655554
No 155
>PLN02310 triacylglycerol lipase
Probab=58.06 E-value=23 Score=36.15 Aligned_cols=64 Identities=16% Similarity=0.088 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHHHHHHCCCC-CCCCeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEeEecCCccC
Q 012236 148 KQVHQVDQFLRKWLMDHPEF-LSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGYILGNPKTD 216 (467)
Q Consensus 148 ~~a~~~~~fL~~F~~~fp~~-~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~iGng~i~ 216 (467)
.+.+++.+.+++..+.+++- ....+.|+|||-||-.+--.|..|.... +.+++.-+..|.|-+.
T Consensus 186 sa~~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~dl~~~~-----~~~~v~vyTFGsPRVG 250 (405)
T PLN02310 186 SASEQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYEAATTI-----PDLFVSVISFGAPRVG 250 (405)
T ss_pred hHHHHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHHHHHhC-----cCcceeEEEecCCCcc
Confidence 45667788888877776532 2347999999999999988887765422 1234555666666554
No 156
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=58.02 E-value=45 Score=34.01 Aligned_cols=126 Identities=13% Similarity=0.017 Sum_probs=70.3
Q ss_pred CceEEEEEEecCCCCCCCCEEEEECCCCchHHHhHHHH-----------hhCceEEeccCCCCCCCcceeCCCCcccCCc
Q 012236 53 DAQLFYYFVKSEKNPKEDPLLLWLTGGPGCSAFSALVY-----------EIGPINFNILEYNGSLPTLHLNPYSWTKEAS 121 (467)
Q Consensus 53 ~~~lfy~f~es~~~~~~~p~~lwlnGGPG~Ss~~g~~~-----------E~GP~~~~~~~~~~~~~~~~~n~~sW~~~an 121 (467)
+.++-|--+-.- +++.+++||-.++==|.|-..|... -+||=+. +- ++..=
T Consensus 40 ~~~~~Y~t~G~l-n~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~-----------lD------t~~yf 101 (389)
T PRK06765 40 DVQMGYETYGTL-NRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKA-----------ID------TNKYF 101 (389)
T ss_pred CceEEEEecccc-CCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCC-----------cC------CCceE
Confidence 367888766543 4566788887776555443322111 1344221 11 33455
Q ss_pred eEEEecCCcccccccc-----------CCC------Ccc-cCchHHHHHHHHHHHHHHHHCCCCCCCCeE-EEeccCCcc
Q 012236 122 ILFVDSPVGTGFSYVR-----------TPL------ASQ-TGDFKQVHQVDQFLRKWLMDHPEFLSNPFY-VGGDSYSGI 182 (467)
Q Consensus 122 ~l~iDqPvG~GfS~~~-----------~~~------~~~-~~~~~~a~~~~~fL~~F~~~fp~~~~~~~~-i~GESYgG~ 182 (467)
||-+|.+ |-|+|... ... +++ .+..+.++++.++|+. . .-.+++ |.|.|.||.
T Consensus 102 vi~~n~l-G~~~~~~p~~g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~----l---gi~~~~~vvG~SmGG~ 173 (389)
T PRK06765 102 VISTDTL-CNVQVKDPNVITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKS----L---GIARLHAVMGPSMGGM 173 (389)
T ss_pred EEEeccc-CCCcCCCCCCCCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHH----c---CCCCceEEEEECHHHH
Confidence 6667766 55554210 000 122 3445555555555543 2 234565 999999999
Q ss_pred chHHHHHHHHhhcccCCCCceeeeEeEecCCc
Q 012236 183 TVPPLVQQISNENEEGIKPLINLQGYILGNPK 214 (467)
Q Consensus 183 yvP~lA~~i~~~n~~~~~~~inLkGi~iGng~ 214 (467)
-+-.+|.+--+ .++++++.++.
T Consensus 174 ial~~a~~~P~----------~v~~lv~ia~~ 195 (389)
T PRK06765 174 QAQEWAVHYPH----------MVERMIGVIGN 195 (389)
T ss_pred HHHHHHHHChH----------hhheEEEEecC
Confidence 98888876444 36777777654
No 157
>PRK13604 luxD acyl transferase; Provisional
Probab=57.68 E-value=94 Score=30.59 Aligned_cols=123 Identities=14% Similarity=0.057 Sum_probs=68.8
Q ss_pred CceEEEEEEecC-CCCCCCCEEEEECCCCchHHHhHHHHhhCceEEeccCCCCCCCcceeCCCCcccCCceEEEecCCcc
Q 012236 53 DAQLFYYFVKSE-KNPKEDPLLLWLTGGPGCSAFSALVYEIGPINFNILEYNGSLPTLHLNPYSWTKEASILFVDSPVGT 131 (467)
Q Consensus 53 ~~~lfy~f~es~-~~~~~~p~~lwlnGGPG~Ss~~g~~~E~GP~~~~~~~~~~~~~~~~~n~~sW~~~an~l~iDqPvG~ 131 (467)
+..|.=|+.+.+ ++++..|+||..+ |.|+.... +... -.+=+.+=.++|-.|.=-|.
T Consensus 19 G~~L~Gwl~~P~~~~~~~~~~vIi~H-Gf~~~~~~--~~~~-------------------A~~La~~G~~vLrfD~rg~~ 76 (307)
T PRK13604 19 GQSIRVWETLPKENSPKKNNTILIAS-GFARRMDH--FAGL-------------------AEYLSSNGFHVIRYDSLHHV 76 (307)
T ss_pred CCEEEEEEEcCcccCCCCCCEEEEeC-CCCCChHH--HHHH-------------------HHHHHHCCCEEEEecCCCCC
Confidence 678888888775 3455667777755 56665321 1100 11112333577888855345
Q ss_pred ccccccCCCCcccCc-hHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEeEe
Q 012236 132 GFSYVRTPLASQTGD-FKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGYIL 210 (467)
Q Consensus 132 GfS~~~~~~~~~~~~-~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~i 210 (467)
|=|-++-. +...+. .+.+....+|+++ .. ..+++|.|+|-||.-+...|. ..+++++++
T Consensus 77 GeS~G~~~-~~t~s~g~~Dl~aaid~lk~----~~---~~~I~LiG~SmGgava~~~A~------------~~~v~~lI~ 136 (307)
T PRK13604 77 GLSSGTID-EFTMSIGKNSLLTVVDWLNT----RG---INNLGLIAASLSARIAYEVIN------------EIDLSFLIT 136 (307)
T ss_pred CCCCCccc-cCcccccHHHHHHHHHHHHh----cC---CCceEEEEECHHHHHHHHHhc------------CCCCCEEEE
Confidence 77744321 111111 1222223444443 21 347999999999987533332 124899999
Q ss_pred cCCccCc
Q 012236 211 GNPKTDK 217 (467)
Q Consensus 211 Gng~i~p 217 (467)
..|+.+-
T Consensus 137 ~sp~~~l 143 (307)
T PRK13604 137 AVGVVNL 143 (307)
T ss_pred cCCcccH
Confidence 9999883
No 158
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=57.61 E-value=21 Score=35.67 Aligned_cols=79 Identities=6% Similarity=-0.107 Sum_probs=45.8
Q ss_pred CceEEEecCCccccccccCCCCcccCchHHH-HHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccC
Q 012236 120 ASILFVDSPVGTGFSYVRTPLASQTGDFKQV-HQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEG 198 (467)
Q Consensus 120 an~l~iDqPvG~GfS~~~~~~~~~~~~~~~a-~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~ 198 (467)
.+++-+|-. |-|.|... .+.++.+ +++-+++....+..+ ..++++.|+|.||..+-.++..- .
T Consensus 95 ~~V~~~D~~-g~g~s~~~------~~~~d~~~~~~~~~v~~l~~~~~---~~~i~lvGhS~GG~i~~~~~~~~---~--- 158 (350)
T TIGR01836 95 QDVYLIDWG-YPDRADRY------LTLDDYINGYIDKCVDYICRTSK---LDQISLLGICQGGTFSLCYAALY---P--- 158 (350)
T ss_pred CeEEEEeCC-CCCHHHhc------CCHHHHHHHHHHHHHHHHHHHhC---CCcccEEEECHHHHHHHHHHHhC---c---
Confidence 467777754 44544211 1222333 335455555444544 46899999999998766555321 1
Q ss_pred CCCceeeeEeEecCCccCcc
Q 012236 199 IKPLINLQGYILGNPKTDKI 218 (467)
Q Consensus 199 ~~~~inLkGi~iGng~i~p~ 218 (467)
-.++++++.++.++..
T Consensus 159 ----~~v~~lv~~~~p~~~~ 174 (350)
T TIGR01836 159 ----DKIKNLVTMVTPVDFE 174 (350)
T ss_pred ----hheeeEEEeccccccC
Confidence 1378888888777643
No 159
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=57.56 E-value=97 Score=29.66 Aligned_cols=103 Identities=18% Similarity=0.210 Sum_probs=67.5
Q ss_pred CEEEEECCCCchHHHh-HHHHhhCceEEeccCCCCCCCcceeCCCCcccCCceEEEecCCccccccccCCCCcccCchHH
Q 012236 71 PLLLWLTGGPGCSAFS-ALVYEIGPINFNILEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGFSYVRTPLASQTGDFKQ 149 (467)
Q Consensus 71 p~~lwlnGGPG~Ss~~-g~~~E~GP~~~~~~~~~~~~~~~~~n~~sW~~~an~l~iDqPvG~GfS~~~~~~~~~~~~~~~ 149 (467)
|.+++++++=|.-..+ .|-.+.+|- .-++-++.| |.|. ... ...+.++.
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~~------------------------~~v~~l~a~-g~~~--~~~---~~~~l~~~ 50 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGPL------------------------LPVYGLQAP-GYGA--GEQ---PFASLDDM 50 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhccC------------------------ceeeccccC-cccc--ccc---ccCCHHHH
Confidence 5678888777664433 344444442 234556667 3332 111 12466788
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEeEecCCccC
Q 012236 150 VHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGYILGNPKTD 216 (467)
Q Consensus 150 a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~iGng~i~ 216 (467)
|+.-.+.|+ +.-|+ -|.+|.|-|+||.-+=.+|.++..+-. -..-++|.|....
T Consensus 51 a~~yv~~Ir---~~QP~---GPy~L~G~S~GG~vA~evA~qL~~~G~-------~Va~L~llD~~~~ 104 (257)
T COG3319 51 AAAYVAAIR---RVQPE---GPYVLLGWSLGGAVAFEVAAQLEAQGE-------EVAFLGLLDAVPP 104 (257)
T ss_pred HHHHHHHHH---HhCCC---CCEEEEeeccccHHHHHHHHHHHhCCC-------eEEEEEEeccCCC
Confidence 887777776 46774 399999999999999999999988642 2566666666554
No 160
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=56.66 E-value=3.6 Score=41.03 Aligned_cols=71 Identities=13% Similarity=0.112 Sum_probs=46.4
Q ss_pred cCCceEEEecCCccccccccCCCCcccCchHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHh
Q 012236 118 KEASILFVDSPVGTGFSYVRTPLASQTGDFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISN 193 (467)
Q Consensus 118 ~~an~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~ 193 (467)
.-.|||.||=-.+..-.|.. ...+...+++.+-.||+.....+ .+...++||.|+|-|+|-+=.+++++-.
T Consensus 103 ~d~NVI~VDWs~~a~~~Y~~----a~~n~~~vg~~la~~l~~L~~~~-g~~~~~ihlIGhSLGAHvaG~aG~~~~~ 173 (331)
T PF00151_consen 103 GDYNVIVVDWSRGASNNYPQ----AVANTRLVGRQLAKFLSFLINNF-GVPPENIHLIGHSLGAHVAGFAGKYLKG 173 (331)
T ss_dssp S-EEEEEEE-HHHHSS-HHH----HHHHHHHHHHHHHHHHHHHHHHH----GGGEEEEEETCHHHHHHHHHHHTTT
T ss_pred CCceEEEEcchhhccccccc----hhhhHHHHHHHHHHHHHHHHhhc-CCChhHEEEEeeccchhhhhhhhhhccC
Confidence 35799999965444333321 12345667887888887776432 1334689999999999999888887766
No 161
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=56.44 E-value=12 Score=34.04 Aligned_cols=55 Identities=18% Similarity=0.282 Sum_probs=40.9
Q ss_pred ccccccccCCCCcccCchHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHH
Q 012236 130 GTGFSYVRTPLASQTGDFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQI 191 (467)
Q Consensus 130 G~GfS~~~~~~~~~~~~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i 191 (467)
|||-|.++-+++ ..+.+.|....+++| .++|+-+ .+.++|-|+|+.-+-.+|.+.
T Consensus 70 gVG~S~G~fD~G--iGE~~Da~aaldW~~---~~hp~s~--~~~l~GfSFGa~Ia~~la~r~ 124 (210)
T COG2945 70 GVGRSQGEFDNG--IGELEDAAAALDWLQ---ARHPDSA--SCWLAGFSFGAYIAMQLAMRR 124 (210)
T ss_pred ccccccCcccCC--cchHHHHHHHHHHHH---hhCCCch--hhhhcccchHHHHHHHHHHhc
Confidence 999999876655 366666777778887 4788643 379999999997666666654
No 162
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=56.39 E-value=81 Score=23.99 Aligned_cols=78 Identities=18% Similarity=0.187 Sum_probs=48.0
Q ss_pred ceEEEEEEecCCCCCCCCEEEEECCCCchHHHhHHHHhhCceEEeccCCCCCCCcceeCCCCcccCCceEEEecCCcccc
Q 012236 54 AQLFYYFVKSEKNPKEDPLLLWLTGGPGCSAFSALVYEIGPINFNILEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGF 133 (467)
Q Consensus 54 ~~lfy~f~es~~~~~~~p~~lwlnGGPG~Ss~~g~~~E~GP~~~~~~~~~~~~~~~~~n~~sW~~~an~l~iDqPvG~Gf 133 (467)
.+||+..++.++. .+.+|+.++|--..|.- +.|..... + .+-.+++-.|+. |.|.
T Consensus 2 ~~L~~~~w~p~~~--~k~~v~i~HG~~eh~~r---y~~~a~~L-~------------------~~G~~V~~~D~r-GhG~ 56 (79)
T PF12146_consen 2 TKLFYRRWKPENP--PKAVVVIVHGFGEHSGR---YAHLAEFL-A------------------EQGYAVFAYDHR-GHGR 56 (79)
T ss_pred cEEEEEEecCCCC--CCEEEEEeCCcHHHHHH---HHHHHHHH-H------------------hCCCEEEEECCC-cCCC
Confidence 4688866554432 57899999987444443 34333222 1 122468889988 9999
Q ss_pred ccccCCCCcccCchHHHHHHHHHHH
Q 012236 134 SYVRTPLASQTGDFKQVHQVDQFLR 158 (467)
Q Consensus 134 S~~~~~~~~~~~~~~~a~~~~~fL~ 158 (467)
|-+.. ....+-++.-+|+..|++
T Consensus 57 S~g~r--g~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 57 SEGKR--GHIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred CCCcc--cccCCHHHHHHHHHHHhC
Confidence 97532 234566677777777763
No 163
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=55.94 E-value=37 Score=32.26 Aligned_cols=58 Identities=29% Similarity=0.386 Sum_probs=42.1
Q ss_pred CeEEEEcCCCccccCchhHHHHHHhcCCCCccCccceeeCCeeeeEEEEEecceEEEEEcCCcccccCCChHHHHHHHHH
Q 012236 381 YRSLIYSGDHDMVVPFLGTEAWIKSLNYSIIDDWRPWILHSQVAGYTRTYSNRMTYATVKGGGHIAPEYRPAECYAMFQR 460 (467)
Q Consensus 381 irVLiY~Gd~D~i~n~~Gt~~wi~~L~w~~~~~~~~w~~~~~~aG~~k~~~~~Ltf~~V~~AGHmvP~DqP~~a~~m~~~ 460 (467)
.+|||++|..|-++|+.-..+.-...+ +..-..+|+||||--..--|+ -++.+++
T Consensus 193 ~PVLiiHgtdDevv~~sHg~~Lye~~k------------------------~~~epl~v~g~gH~~~~~~~~-yi~~l~~ 247 (258)
T KOG1552|consen 193 CPVLIIHGTDDEVVDFSHGKALYERCK------------------------EKVEPLWVKGAGHNDIELYPE-YIEHLRR 247 (258)
T ss_pred CCEEEEecccCceecccccHHHHHhcc------------------------ccCCCcEEecCCCcccccCHH-HHHHHHH
Confidence 499999999999999886655433311 225568999999998776664 4566666
Q ss_pred HHc
Q 012236 461 WIN 463 (467)
Q Consensus 461 fl~ 463 (467)
|++
T Consensus 248 f~~ 250 (258)
T KOG1552|consen 248 FIS 250 (258)
T ss_pred HHH
Confidence 764
No 164
>PLN00413 triacylglycerol lipase
Probab=55.38 E-value=15 Score=38.04 Aligned_cols=39 Identities=15% Similarity=0.278 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHh
Q 012236 152 QVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISN 193 (467)
Q Consensus 152 ~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~ 193 (467)
++...|+++++.+|+ .+++|+|||-||..+-..|..+..
T Consensus 269 ~i~~~Lk~ll~~~p~---~kliVTGHSLGGALAtLaA~~L~~ 307 (479)
T PLN00413 269 TILRHLKEIFDQNPT---SKFILSGHSLGGALAILFTAVLIM 307 (479)
T ss_pred HHHHHHHHHHHHCCC---CeEEEEecCHHHHHHHHHHHHHHh
Confidence 567788888888884 479999999999999888876653
No 165
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=54.84 E-value=22 Score=36.66 Aligned_cols=58 Identities=9% Similarity=-0.044 Sum_probs=44.3
Q ss_pred CCeEEEEcCCCccccCchhHHHHHHhcCCCCccCccceeeCCeeeeEEEEEecceEEEEEcCCcccccCCChHHHHHHHH
Q 012236 380 GYRSLIYSGDHDMVVPFLGTEAWIKSLNYSIIDDWRPWILHSQVAGYTRTYSNRMTYATVKGGGHIAPEYRPAECYAMFQ 459 (467)
Q Consensus 380 ~irVLiY~Gd~D~i~n~~Gt~~wi~~L~w~~~~~~~~w~~~~~~aG~~k~~~~~Ltf~~V~~AGHmvP~DqP~~a~~m~~ 459 (467)
.++||+.+|..|.++|....+.+.+.. .+..++.+.++ |+ +++|+.+++.+.
T Consensus 355 ~~PvLiI~G~~D~ivP~~~a~~l~~~~-------------------------~~~~l~~i~~~-~~--~e~~~~~~~~i~ 406 (414)
T PRK05077 355 PTPMLSGYWKNDPFSPEEDSRLIASSS-------------------------ADGKLLEIPFK-PV--YRNFDKALQEIS 406 (414)
T ss_pred CCcEEEEecCCCCCCCHHHHHHHHHhC-------------------------CCCeEEEccCC-Cc--cCCHHHHHHHHH
Confidence 579999999999999999888664431 12445667776 33 359999999999
Q ss_pred HHHcCC
Q 012236 460 RWINHD 465 (467)
Q Consensus 460 ~fl~~~ 465 (467)
+||..+
T Consensus 407 ~wL~~~ 412 (414)
T PRK05077 407 DWLEDR 412 (414)
T ss_pred HHHHHH
Confidence 999754
No 166
>PLN02408 phospholipase A1
Probab=54.42 E-value=19 Score=36.23 Aligned_cols=46 Identities=11% Similarity=0.062 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhh
Q 012236 148 KQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNE 194 (467)
Q Consensus 148 ~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~ 194 (467)
.+.+++.+-++++.+.+|.. ...++|+|+|-||-.+-..|..|...
T Consensus 179 s~r~qVl~eI~~ll~~y~~~-~~sI~vTGHSLGGALAtLaA~dl~~~ 224 (365)
T PLN02408 179 SLQEMVREEIARLLQSYGDE-PLSLTITGHSLGAALATLTAYDIKTT 224 (365)
T ss_pred hHHHHHHHHHHHHHHhcCCC-CceEEEeccchHHHHHHHHHHHHHHh
Confidence 56678888899999988864 34699999999999999888888653
No 167
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=53.71 E-value=22 Score=37.30 Aligned_cols=80 Identities=18% Similarity=0.328 Sum_probs=55.7
Q ss_pred HHHHhhhcCCeEEEEcCCCccccCchhHHHHHHhcCCCCccCccceeeCCeeeeEEEEEecceEEEEEcCCcccc--cCC
Q 012236 372 FHVSLSTKGYRSLIYSGDHDMVVPFLGTEAWIKSLNYSIIDDWRPWILHSQVAGYTRTYSNRMTYATVKGGGHIA--PEY 449 (467)
Q Consensus 372 ~~~~LL~~~irVLiY~Gd~D~i~n~~Gt~~wi~~L~w~~~~~~~~w~~~~~~aG~~k~~~~~Ltf~~V~~AGHmv--P~D 449 (467)
.+....++|=|+|+|+|..|.+++..+|..+-+++.=.-. ++ .--+..+ +-|..|.|.||-. |-.
T Consensus 345 DLsaF~~~GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g---------~~-~~~v~dF---~RlF~vPGm~HC~gG~g~ 411 (474)
T PF07519_consen 345 DLSAFRARGGKLILYHGWADPLIPPQGTIDYYERVVARMG---------GA-LADVDDF---YRLFMVPGMGHCGGGPGP 411 (474)
T ss_pred CHHHHHhcCCeEEEEecCCCCccCCCcHHHHHHHHHHhcc---------cc-cccccce---eEEEecCCCcccCCCCCC
Confidence 3445556899999999999999999999998877631100 00 0001222 5568999999985 445
Q ss_pred ChHHHHHHHHHHHcC
Q 012236 450 RPAECYAMFQRWINH 464 (467)
Q Consensus 450 qP~~a~~m~~~fl~~ 464 (467)
.|-.+|.-+.+|+.+
T Consensus 412 ~~~d~l~aL~~WVE~ 426 (474)
T PF07519_consen 412 DPFDALTALVDWVEN 426 (474)
T ss_pred CCCCHHHHHHHHHhC
Confidence 666788888888764
No 168
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=53.09 E-value=30 Score=32.33 Aligned_cols=56 Identities=11% Similarity=0.036 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEeEecCCccCcc
Q 012236 149 QVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGYILGNPKTDKI 218 (467)
Q Consensus 149 ~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~iGng~i~p~ 218 (467)
+.+++..+|++ .|+-...+ .+|+|.|.||.-+-.+|.+-.+ -+.+++.-+|.+++.
T Consensus 98 l~~el~p~i~~---~~~~~~~~-~~i~G~S~GG~~Al~~~l~~Pd----------~F~~~~~~S~~~~~~ 153 (251)
T PF00756_consen 98 LTEELIPYIEA---NYRTDPDR-RAIAGHSMGGYGALYLALRHPD----------LFGAVIAFSGALDPS 153 (251)
T ss_dssp HHTHHHHHHHH---HSSEEECC-EEEEEETHHHHHHHHHHHHSTT----------TESEEEEESEESETT
T ss_pred hhccchhHHHH---hcccccce-eEEeccCCCcHHHHHHHHhCcc----------ccccccccCcccccc
Confidence 34444444443 34433333 9999999999988888765322 388898888887765
No 169
>PLN02802 triacylglycerol lipase
Probab=52.57 E-value=32 Score=36.08 Aligned_cols=64 Identities=11% Similarity=0.096 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEeEecCCccC
Q 012236 148 KQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGYILGNPKTD 216 (467)
Q Consensus 148 ~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~iGng~i~ 216 (467)
.+.+++.+-++++.+.+|.- ...++|+|||-||-.+-..|..|...... .+.+.-+..|.|-+.
T Consensus 309 S~reqVl~eV~~Ll~~Y~~e-~~sI~VTGHSLGGALAtLaA~dL~~~~~~----~~pV~vyTFGsPRVG 372 (509)
T PLN02802 309 SLSESVVGEVRRLMEKYKGE-ELSITVTGHSLGAALALLVADELATCVPA----APPVAVFSFGGPRVG 372 (509)
T ss_pred hHHHHHHHHHHHHHHhCCCC-cceEEEeccchHHHHHHHHHHHHHHhCCC----CCceEEEEcCCCCcc
Confidence 46678888889888888743 24799999999999999888888664321 123444555555443
No 170
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=51.67 E-value=9.9 Score=30.37 Aligned_cols=26 Identities=35% Similarity=0.330 Sum_probs=13.5
Q ss_pred ChhhHHHHHHHH--HHHHhhhccCCCCc
Q 012236 1 MAKLCFSLLLLW--QLQLCMQLIDSRST 26 (467)
Q Consensus 1 ~~~~~~~~~~~~--~~~~~~~~~~~~~~ 26 (467)
|.+..+++|+|+ ++|+.++.+++|++
T Consensus 1 MaSK~~llL~l~LA~lLlisSevaa~~~ 28 (95)
T PF07172_consen 1 MASKAFLLLGLLLAALLLISSEVAAREL 28 (95)
T ss_pred CchhHHHHHHHHHHHHHHHHhhhhhHHh
Confidence 777766555433 34444455554443
No 171
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=51.61 E-value=34 Score=31.78 Aligned_cols=58 Identities=24% Similarity=0.373 Sum_probs=41.7
Q ss_pred CCeEEEEcCCCccccCchhHHHHHHhcCCCCccCccceeeCCeeeeEEEEEecceEEEEEcCCcccccCCCh--HHHHHH
Q 012236 380 GYRSLIYSGDHDMVVPFLGTEAWIKSLNYSIIDDWRPWILHSQVAGYTRTYSNRMTYATVKGGGHIAPEYRP--AECYAM 457 (467)
Q Consensus 380 ~irVLiY~Gd~D~i~n~~Gt~~wi~~L~w~~~~~~~~w~~~~~~aG~~k~~~~~Ltf~~V~~AGHmvP~DqP--~~a~~m 457 (467)
.++-|-+.|+.|.+++..-.+..++. +.+. .+...-+||+||.-.| +...+.
T Consensus 163 ~~PSLHi~G~~D~iv~~~~s~~L~~~------------------------~~~a--~vl~HpggH~VP~~~~~~~~i~~f 216 (230)
T KOG2551|consen 163 STPSLHIFGETDTIVPSERSEQLAES------------------------FKDA--TVLEHPGGHIVPNKAKYKEKIADF 216 (230)
T ss_pred CCCeeEEecccceeecchHHHHHHHh------------------------cCCC--eEEecCCCccCCCchHHHHHHHHH
Confidence 47889999999999999977766655 2222 4777889999997765 444555
Q ss_pred HHHHHc
Q 012236 458 FQRWIN 463 (467)
Q Consensus 458 ~~~fl~ 463 (467)
|+.++.
T Consensus 217 i~~~~~ 222 (230)
T KOG2551|consen 217 IQSFLQ 222 (230)
T ss_pred HHHHHH
Confidence 555543
No 172
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=51.28 E-value=24 Score=32.75 Aligned_cols=50 Identities=10% Similarity=0.026 Sum_probs=38.0
Q ss_pred CchHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhc
Q 012236 145 GDFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNEN 195 (467)
Q Consensus 145 ~~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n 195 (467)
+.+..|+.+.+.|.+..+..+.- .+++-+.|+|-||.++-+....+.+.+
T Consensus 54 gI~~~g~rL~~eI~~~~~~~~~~-~~~IsfIgHSLGGli~r~al~~~~~~~ 103 (217)
T PF05057_consen 54 GIDVCGERLAEEILEHIKDYESK-IRKISFIGHSLGGLIARYALGLLHDKP 103 (217)
T ss_pred hhHHHHHHHHHHHHHhccccccc-cccceEEEecccHHHHHHHHHHhhhcc
Confidence 34567788888888877766533 468999999999999987777666654
No 173
>PRK11071 esterase YqiA; Provisional
Probab=50.26 E-value=25 Score=31.78 Aligned_cols=78 Identities=19% Similarity=0.297 Sum_probs=48.3
Q ss_pred CEEEEECCCCchHHHhH--HHHhhCceEEeccCCCCCCCcceeCCCCcccCCceEEEecCCccccccccCCCCcccCchH
Q 012236 71 PLLLWLTGGPGCSAFSA--LVYEIGPINFNILEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGFSYVRTPLASQTGDFK 148 (467)
Q Consensus 71 p~~lwlnGGPG~Ss~~g--~~~E~GP~~~~~~~~~~~~~~~~~n~~sW~~~an~l~iDqPvG~GfS~~~~~~~~~~~~~~ 148 (467)
|.||+|+|-+|++..+- .+.+. +..+ ....+++.+|.| |+. ++
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~----------------l~~~----~~~~~v~~~dl~---g~~------------~~ 46 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNW----------------LAQH----HPDIEMIVPQLP---PYP------------AD 46 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHH----------------HHHh----CCCCeEEeCCCC---CCH------------HH
Confidence 68999999988877653 12111 0000 002356888888 331 23
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHH
Q 012236 149 QVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQ 190 (467)
Q Consensus 149 ~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~ 190 (467)
.++ ++.++.+... .++++|.|.|.||.++-.+|.+
T Consensus 47 ~~~----~l~~l~~~~~---~~~~~lvG~S~Gg~~a~~~a~~ 81 (190)
T PRK11071 47 AAE----LLESLVLEHG---GDPLGLVGSSLGGYYATWLSQC 81 (190)
T ss_pred HHH----HHHHHHHHcC---CCCeEEEEECHHHHHHHHHHHH
Confidence 444 4444444432 4589999999999999988875
No 174
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=49.90 E-value=34 Score=30.77 Aligned_cols=67 Identities=19% Similarity=0.151 Sum_probs=40.8
Q ss_pred cCCceEEEecCCccccccccCCCCcccCchHHHHHHHHHHHHHHHHC-CCCCCCCeEEEeccCCccchHHHHHH
Q 012236 118 KEASILFVDSPVGTGFSYVRTPLASQTGDFKQVHQVDQFLRKWLMDH-PEFLSNPFYVGGDSYSGITVPPLVQQ 190 (467)
Q Consensus 118 ~~an~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fL~~F~~~f-p~~~~~~~~i~GESYgG~yvP~lA~~ 190 (467)
+.|-|.|++....-+....--... --+..|.+|-.|+..+=... | .-.+-+.|+|||..-+=.-+..
T Consensus 62 ~vAvV~WlgYdaP~~~~~~a~~~~---~A~~ga~~L~~f~~gl~a~~~~---~~~~tv~GHSYGS~v~G~A~~~ 129 (177)
T PF06259_consen 62 SVAVVAWLGYDAPAGGLPDAASPG---YARAGAPRLARFLDGLRATHGP---DAHLTVVGHSYGSTVVGLAAQQ 129 (177)
T ss_pred CeEEEEEcCCCCCCCccccccCch---HHHHHHHHHHHHHHHhhhhcCC---CCCEEEEEecchhHHHHHHhhh
Confidence 778899986655522111111111 12466777888887765555 3 3469999999998766555544
No 175
>PLN02847 triacylglycerol lipase
Probab=49.10 E-value=33 Score=36.73 Aligned_cols=61 Identities=18% Similarity=0.139 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEeEecCC-ccCcc
Q 012236 150 VHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGYILGNP-KTDKI 218 (467)
Q Consensus 150 a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~iGng-~i~p~ 218 (467)
.+.+...|++-+..+|.| ++.|+|||.||--+--++..+.+... .-+++.++.|-| +++..
T Consensus 234 ~~~i~~~L~kal~~~PdY---kLVITGHSLGGGVAALLAilLRe~~~-----fssi~CyAFgPp~cvS~e 295 (633)
T PLN02847 234 AKLSTPCLLKALDEYPDF---KIKIVGHSLGGGTAALLTYILREQKE-----FSSTTCVTFAPAACMTWD 295 (633)
T ss_pred HHHHHHHHHHHHHHCCCC---eEEEeccChHHHHHHHHHHHHhcCCC-----CCCceEEEecCchhcCHH
Confidence 333444555556678865 79999999999988877665533221 235667777753 44443
No 176
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=48.60 E-value=71 Score=31.63 Aligned_cols=141 Identities=11% Similarity=0.011 Sum_probs=69.9
Q ss_pred CceEEEEEEecCCCCCCCCEEEEECCCCchHHHh---HHHHhhCceEEeccCCCCCCCcceeCCCCcccCCceEEEecCC
Q 012236 53 DAQLFYYFVKSEKNPKEDPLLLWLTGGPGCSAFS---ALVYEIGPINFNILEYNGSLPTLHLNPYSWTKEASILFVDSPV 129 (467)
Q Consensus 53 ~~~lfy~f~es~~~~~~~p~~lwlnGGPG~Ss~~---g~~~E~GP~~~~~~~~~~~~~~~~~n~~sW~~~an~l~iDqPv 129 (467)
+..++=|+..-+......|.||-++|..|.+... ..+...|=..+..+- -|- .......... ..+.
T Consensus 66 g~~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~~~~~~~~~a~~G~~vl~~d~-rGq-g~~~~d~~~~---------~~~~ 134 (320)
T PF05448_consen 66 GSRVYGWLYRPKNAKGKLPAVVQFHGYGGRSGDPFDLLPWAAAGYAVLAMDV-RGQ-GGRSPDYRGS---------SGGT 134 (320)
T ss_dssp GEEEEEEEEEES-SSSSEEEEEEE--TT--GGGHHHHHHHHHTT-EEEEE---TTT-SSSS-B-SSB---------SSS-
T ss_pred CCEEEEEEEecCCCCCCcCEEEEecCCCCCCCCcccccccccCCeEEEEecC-CCC-CCCCCCcccc---------CCCC
Confidence 5667778776654557789999999998875432 345566655544321 110 0001111111 1122
Q ss_pred ccccccccCCCCcccC-chHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEe
Q 012236 130 GTGFSYVRTPLASQTG-DFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGY 208 (467)
Q Consensus 130 G~GfS~~~~~~~~~~~-~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi 208 (467)
.-|+-.-...+...+. -..+..|.+..+ .|+...|+.-.+.+.++|+|-||-..-.+|. +-. .++.+
T Consensus 135 ~~g~~~~g~~~~~e~~yyr~~~~D~~rav-d~l~slpevD~~rI~v~G~SqGG~lal~~aa-Ld~----------rv~~~ 202 (320)
T PF05448_consen 135 LKGHITRGIDDNPEDYYYRRVYLDAVRAV-DFLRSLPEVDGKRIGVTGGSQGGGLALAAAA-LDP----------RVKAA 202 (320)
T ss_dssp SSSSTTTTTTS-TTT-HHHHHHHHHHHHH-HHHHTSTTEEEEEEEEEEETHHHHHHHHHHH-HSS----------T-SEE
T ss_pred CccHHhcCccCchHHHHHHHHHHHHHHHH-HHHHhCCCcCcceEEEEeecCchHHHHHHHH-hCc----------cccEE
Confidence 2233221100000000 012223333333 3567789998889999999999988777765 322 27888
Q ss_pred EecCCccC
Q 012236 209 ILGNPKTD 216 (467)
Q Consensus 209 ~iGng~i~ 216 (467)
+...|+..
T Consensus 203 ~~~vP~l~ 210 (320)
T PF05448_consen 203 AADVPFLC 210 (320)
T ss_dssp EEESESSS
T ss_pred EecCCCcc
Confidence 88877664
No 177
>COG0627 Predicted esterase [General function prediction only]
Probab=48.23 E-value=30 Score=34.24 Aligned_cols=132 Identities=18% Similarity=0.165 Sum_probs=73.7
Q ss_pred CCCEEEEECCCCchHHHhHHHHhhCceEEeccCCCCCCCcceeC-CCCcccCCceEEEecCCccccccccCCCCcccCch
Q 012236 69 EDPLLLWLTGGPGCSAFSALVYEIGPINFNILEYNGSLPTLHLN-PYSWTKEASILFVDSPVGTGFSYVRTPLASQTGDF 147 (467)
Q Consensus 69 ~~p~~lwlnGGPG~Ss~~g~~~E~GP~~~~~~~~~~~~~~~~~n-~~sW~~~an~l~iDqPvG~GfS~~~~~~~~~~~~~ 147 (467)
.+--|+|+.+|..|.. -++.+.++.+=..+. .+ -.++-+ -.-+....++--|+ |+|.|.|+-.+...-.....
T Consensus 52 ~~ipV~~~l~G~t~~~--~~~~~~~g~~~~a~~-~g--~~~~~p~t~~~~~~~~~~vv~-p~G~~~sfY~d~~~~~~~~~ 125 (316)
T COG0627 52 RDIPVLYLLSGLTCNE--PNVYLLDGLRRQADE-SG--WAVVTPDTSPRGAGVNISVVM-PLGGGASFYSDWTQPPWASG 125 (316)
T ss_pred CCCCEEEEeCCCCCCC--CceEeccchhhhhhh-cC--eEEecCCCCcccCCCCccccc-cCCCccceecccccCccccC
Confidence 4455666677888885 233334444322211 00 112222 33355566666666 79999998544321111111
Q ss_pred HHHHHHHHHHH-----HHHHHCCCCCC-CCeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEeEecCCccCcc
Q 012236 148 KQVHQVDQFLR-----KWLMDHPEFLS-NPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGYILGNPKTDKI 218 (467)
Q Consensus 148 ~~a~~~~~fL~-----~F~~~fp~~~~-~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~iGng~i~p~ 218 (467)
.-+++.||. .+.+.||--.+ ..-.|+|.|-||+=+-.+|.+-.+ .++.++=-.|+++|.
T Consensus 126 --~~q~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd----------~f~~~sS~Sg~~~~s 190 (316)
T COG0627 126 --PYQWETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPD----------RFKSASSFSGILSPS 190 (316)
T ss_pred --ccchhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcc----------hhceecccccccccc
Confidence 234555554 34445663321 268999999999988888875432 267777777777775
No 178
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=47.50 E-value=46 Score=31.30 Aligned_cols=66 Identities=24% Similarity=0.211 Sum_probs=40.3
Q ss_pred CceEEEecCCccccccccCCCCcccCch-HHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHH
Q 012236 120 ASILFVDSPVGTGFSYVRTPLASQTGDF-KQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQ 189 (467)
Q Consensus 120 an~l~iDqPvG~GfS~~~~~~~~~~~~~-~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~ 189 (467)
..+|-.|.= |.|=|...........-. =+..||-..|..-=+.-| .+|+|..|+||||+-+=-++.
T Consensus 58 f~Vlt~dyR-G~g~S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~~~---~~P~y~vgHS~GGqa~gL~~~ 124 (281)
T COG4757 58 FEVLTFDYR-GIGQSRPASLSGSQWRYLDWARLDFPAALAALKKALP---GHPLYFVGHSFGGQALGLLGQ 124 (281)
T ss_pred ceEEEEecc-cccCCCccccccCccchhhhhhcchHHHHHHHHhhCC---CCceEEeeccccceeeccccc
Confidence 467777755 888777554443322222 233455555554333445 679999999999997655543
No 179
>PLN02934 triacylglycerol lipase
Probab=47.43 E-value=27 Score=36.61 Aligned_cols=40 Identities=23% Similarity=0.247 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHh
Q 012236 151 HQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISN 193 (467)
Q Consensus 151 ~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~ 193 (467)
.++...|+++.+.+|. .+++++|||-||-.+-..|..+..
T Consensus 305 ~~v~~~lk~ll~~~p~---~kIvVTGHSLGGALAtLaA~~L~l 344 (515)
T PLN02934 305 YAVRSKLKSLLKEHKN---AKFVVTGHSLGGALAILFPTVLVL 344 (515)
T ss_pred HHHHHHHHHHHHHCCC---CeEEEeccccHHHHHHHHHHHHHH
Confidence 3577888888888885 479999999999998888876654
No 180
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=46.70 E-value=22 Score=32.83 Aligned_cols=45 Identities=20% Similarity=0.300 Sum_probs=34.5
Q ss_pred HHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEeEecCCc
Q 012236 159 KWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGYILGNPK 214 (467)
Q Consensus 159 ~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~iGng~ 214 (467)
+|++.+|+...+.+-|.|-|.||-.+-.+|.+.- .++.|+..+|-
T Consensus 11 ~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-----------~i~avVa~~ps 55 (213)
T PF08840_consen 11 DWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-----------QISAVVAISPS 55 (213)
T ss_dssp HHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-----------SEEEEEEES--
T ss_pred HHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-----------CccEEEEeCCc
Confidence 5677899988889999999999999999998753 37778776664
No 181
>PLN02162 triacylglycerol lipase
Probab=45.43 E-value=27 Score=36.26 Aligned_cols=39 Identities=18% Similarity=0.260 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHh
Q 012236 152 QVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISN 193 (467)
Q Consensus 152 ~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~ 193 (467)
.+.+.|++++.++|. .+++++|||-||-.+--.|..+..
T Consensus 263 ~I~~~L~~lL~k~p~---~kliVTGHSLGGALAtLaAa~L~~ 301 (475)
T PLN02162 263 TIRQMLRDKLARNKN---LKYILTGHSLGGALAALFPAILAI 301 (475)
T ss_pred HHHHHHHHHHHhCCC---ceEEEEecChHHHHHHHHHHHHHH
Confidence 455667777777774 479999999999988877766544
No 182
>KOG3079 consensus Uridylate kinase/adenylate kinase [Nucleotide transport and metabolism]
Probab=45.21 E-value=11 Score=33.90 Aligned_cols=17 Identities=29% Similarity=0.855 Sum_probs=13.9
Q ss_pred CCCCEEEEECCCCchHH
Q 012236 68 KEDPLLLWLTGGPGCSA 84 (467)
Q Consensus 68 ~~~p~~lwlnGGPG~Ss 84 (467)
.+.|-|||.=|||||-=
T Consensus 5 ~~~~~IifVlGGPGsgK 21 (195)
T KOG3079|consen 5 LDKPPIIFVLGGPGSGK 21 (195)
T ss_pred ccCCCEEEEEcCCCCCc
Confidence 35688999999999853
No 183
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=44.07 E-value=37 Score=32.02 Aligned_cols=65 Identities=18% Similarity=0.236 Sum_probs=46.4
Q ss_pred CceEEEecCCccccccccCCCCcccCchHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhh
Q 012236 120 ASILFVDSPVGTGFSYVRTPLASQTGDFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNE 194 (467)
Q Consensus 120 an~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~ 194 (467)
.-++=|+-| |-|==+.. ...++.++.|+.+...|+- -+..+|+-++|+|+||..+=.+|.++-+.
T Consensus 34 iel~avqlP-GR~~r~~e---p~~~di~~Lad~la~el~~------~~~d~P~alfGHSmGa~lAfEvArrl~~~ 98 (244)
T COG3208 34 IELLAVQLP-GRGDRFGE---PLLTDIESLADELANELLP------PLLDAPFALFGHSMGAMLAFEVARRLERA 98 (244)
T ss_pred hheeeecCC-CcccccCC---cccccHHHHHHHHHHHhcc------ccCCCCeeecccchhHHHHHHHHHHHHHc
Confidence 457888888 66633222 2346667777777666642 25578999999999999999999887664
No 184
>PF09292 Neil1-DNA_bind: Endonuclease VIII-like 1, DNA bind; InterPro: IPR015371 This domain is predominantly found in Endonuclease VIII-like 1 proteins and adopts a glucocorticoid receptor-like fold. Structural analysis reveals a zincless finger motif that is required for glycosylase activity []. ; PDB: 1TDH_A.
Probab=43.92 E-value=14 Score=23.70 Aligned_cols=12 Identities=33% Similarity=1.027 Sum_probs=6.5
Q ss_pred CCEEEEECCCCc
Q 012236 70 DPLLLWLTGGPG 81 (467)
Q Consensus 70 ~p~~lwlnGGPG 81 (467)
.--+||++|-||
T Consensus 24 ~gRTiWFqGdPG 35 (39)
T PF09292_consen 24 NGRTIWFQGDPG 35 (39)
T ss_dssp TS-EEEESS---
T ss_pred CCCEEEeeCCCC
Confidence 455899999998
No 185
>PLN03037 lipase class 3 family protein; Provisional
Probab=42.64 E-value=52 Score=34.64 Aligned_cols=47 Identities=11% Similarity=0.044 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHHHHHCCCC-CCCCeEEEeccCCccchHHHHHHHHhh
Q 012236 148 KQVHQVDQFLRKWLMDHPEF-LSNPFYVGGDSYSGITVPPLVQQISNE 194 (467)
Q Consensus 148 ~~a~~~~~fL~~F~~~fp~~-~~~~~~i~GESYgG~yvP~lA~~i~~~ 194 (467)
.+.+++.+-+++..+.+++. ....++|+|+|-||-.+--.|..|...
T Consensus 295 SareQVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~DIa~~ 342 (525)
T PLN03037 295 SASEQVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYEAARS 342 (525)
T ss_pred hhHHHHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHHHHHh
Confidence 34567777788887777743 245799999999999998888777653
No 186
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=42.52 E-value=93 Score=33.66 Aligned_cols=113 Identities=24% Similarity=0.319 Sum_probs=63.7
Q ss_pred CCCCEEEEECCCCchHHHhHHHHhhCceEEeccCCCCCCCcceeCCCCcccCC----------ceEEEecCCccc---cc
Q 012236 68 KEDPLLLWLTGGPGCSAFSALVYEIGPINFNILEYNGSLPTLHLNPYSWTKEA----------SILFVDSPVGTG---FS 134 (467)
Q Consensus 68 ~~~p~~lwlnGGPG~Ss~~g~~~E~GP~~~~~~~~~~~~~~~~~n~~sW~~~a----------n~l~iDqPvG~G---fS 134 (467)
+.-|+++..-||||. .++.|.++|.+.- =|++||.- |+- --
T Consensus 640 kkYptvl~VYGGP~V-------------------------QlVnnsfkgi~ylR~~~LaslGy~Vv~IDnR-GS~hRGlk 693 (867)
T KOG2281|consen 640 KKYPTVLNVYGGPGV-------------------------QLVNNSFKGIQYLRFCRLASLGYVVVFIDNR-GSAHRGLK 693 (867)
T ss_pred CCCceEEEEcCCCce-------------------------EEeeccccceehhhhhhhhhcceEEEEEcCC-Cccccchh
Confidence 458999999999983 1566777777652 36889944 321 00
Q ss_pred cccCCCCcccCchHHHHHHHHHHHHHHHHCCCCCC-CCeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEeEecCC
Q 012236 135 YVRTPLASQTGDFKQVHQVDQFLRKWLMDHPEFLS-NPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGYILGNP 213 (467)
Q Consensus 135 ~~~~~~~~~~~~~~~a~~~~~fL~~F~~~fp~~~~-~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~iGng 213 (467)
+-..- .......+ ++|=.+-||-.-++.- |.. ..+-|-|-||||...-.. |.+.. .| ++-.+-|.|
T Consensus 694 FE~~i-k~kmGqVE-~eDQVeglq~Laeq~g-fidmdrV~vhGWSYGGYLSlm~---L~~~P------~I-frvAIAGap 760 (867)
T KOG2281|consen 694 FESHI-KKKMGQVE-VEDQVEGLQMLAEQTG-FIDMDRVGVHGWSYGGYLSLMG---LAQYP------NI-FRVAIAGAP 760 (867)
T ss_pred hHHHH-hhccCeee-ehhhHHHHHHHHHhcC-cccchheeEeccccccHHHHHH---hhcCc------ce-eeEEeccCc
Confidence 00000 00011111 2223355554444432 322 358999999999765432 22322 23 677788999
Q ss_pred ccCccc
Q 012236 214 KTDKIV 219 (467)
Q Consensus 214 ~i~p~~ 219 (467)
+++...
T Consensus 761 VT~W~~ 766 (867)
T KOG2281|consen 761 VTDWRL 766 (867)
T ss_pred ceeeee
Confidence 988864
No 187
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=42.07 E-value=47 Score=32.88 Aligned_cols=121 Identities=17% Similarity=0.182 Sum_probs=66.0
Q ss_pred CCceEEEEEEecCCCCCCCCEEEEECCCCchHHH------hHHHHhhCceEEeccCCCCCCCcceeCCCCcccCCceEEE
Q 012236 52 EDAQLFYYFVKSEKNPKEDPLLLWLTGGPGCSAF------SALVYEIGPINFNILEYNGSLPTLHLNPYSWTKEASILFV 125 (467)
Q Consensus 52 ~~~~lfy~f~es~~~~~~~p~~lwlnGGPG~Ss~------~g~~~E~GP~~~~~~~~~~~~~~~~~n~~sW~~~an~l~i 125 (467)
.+--.+.|.-. ......|+||-++|==|.|.. ...+.+-| | .++-.
T Consensus 59 g~~~~ldw~~~--p~~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg-~-------------------------~~Vv~ 110 (345)
T COG0429 59 GGFIDLDWSED--PRAAKKPLVVLFHGLEGSSNSPYARGLMRALSRRG-W-------------------------LVVVF 110 (345)
T ss_pred CCEEEEeeccC--ccccCCceEEEEeccCCCCcCHHHHHHHHHHHhcC-C-------------------------eEEEE
Confidence 44567777543 123455999999987776643 23334344 2 22333
Q ss_pred ecCCccccccccCCCCcccCchHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCceee
Q 012236 126 DSPVGTGFSYVRTPLASQTGDFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINL 205 (467)
Q Consensus 126 DqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inL 205 (467)
+ --|.|.+-.....-|...+. +|+..||...-.++| .+++|.+|-|.||.. +|..+.++.+ +.. ..
T Consensus 111 ~-~Rgcs~~~n~~p~~yh~G~t---~D~~~~l~~l~~~~~---~r~~~avG~SLGgnm---La~ylgeeg~---d~~-~~ 176 (345)
T COG0429 111 H-FRGCSGEANTSPRLYHSGET---EDIRFFLDWLKARFP---PRPLYAVGFSLGGNM---LANYLGEEGD---DLP-LD 176 (345)
T ss_pred e-cccccCCcccCcceecccch---hHHHHHHHHHHHhCC---CCceEEEEecccHHH---HHHHHHhhcc---Ccc-cc
Confidence 3 33555444333333332333 344444444334676 689999999999953 4445544332 222 36
Q ss_pred eEeEecCCc
Q 012236 206 QGYILGNPK 214 (467)
Q Consensus 206 kGi~iGng~ 214 (467)
.++++-+|+
T Consensus 177 aa~~vs~P~ 185 (345)
T COG0429 177 AAVAVSAPF 185 (345)
T ss_pred eeeeeeCHH
Confidence 777777765
No 188
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=41.44 E-value=22 Score=32.74 Aligned_cols=49 Identities=24% Similarity=0.335 Sum_probs=31.6
Q ss_pred CCeEEEEcCCCccccCchhHHHHHHhcCCCCccCccceeeCCeeeeEEEEEecceEEEEEcCCcccccCCChHH
Q 012236 380 GYRSLIYSGDHDMVVPFLGTEAWIKSLNYSIIDDWRPWILHSQVAGYTRTYSNRMTYATVKGGGHIAPEYRPAE 453 (467)
Q Consensus 380 ~irVLiY~Gd~D~i~n~~Gt~~wi~~L~w~~~~~~~~w~~~~~~aG~~k~~~~~Ltf~~V~~AGHmvP~DqP~~ 453 (467)
.+++|-..|..|.+++...++...+. +.+. +-+.....||.||...+..
T Consensus 161 ~iPtlHv~G~~D~~~~~~~s~~L~~~------------------------~~~~-~~v~~h~gGH~vP~~~~~~ 209 (212)
T PF03959_consen 161 SIPTLHVIGENDPVVPPERSEALAEM------------------------FDPD-ARVIEHDGGHHVPRKKEDV 209 (212)
T ss_dssp --EEEEEEETT-SSS-HHHHHHHHHH------------------------HHHH-EEEEEESSSSS----HHHH
T ss_pred CCCeEEEEeCCCCCcchHHHHHHHHh------------------------ccCC-cEEEEECCCCcCcCChhhc
Confidence 58999999999999998777766655 2233 6688889999999887653
No 189
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=40.17 E-value=56 Score=32.60 Aligned_cols=59 Identities=19% Similarity=0.320 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEeEecCCcc
Q 012236 151 HQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGYILGNPKT 215 (467)
Q Consensus 151 ~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~iGng~i 215 (467)
.++.+-++.....+| +..++++|+|-||-++.-.|..|...... ...+++=+--|-|-+
T Consensus 155 ~~~~~~~~~L~~~~~---~~~i~vTGHSLGgAlA~laa~~i~~~~~~---~~~~v~v~tFG~PRv 213 (336)
T KOG4569|consen 155 SGLDAELRRLIELYP---NYSIWVTGHSLGGALASLAALDLVKNGLK---TSSPVKVYTFGQPRV 213 (336)
T ss_pred HHHHHHHHHHHHhcC---CcEEEEecCChHHHHHHHHHHHHHHcCCC---CCCceEEEEecCCCc
Confidence 345556666667777 55899999999999999999999886532 123444454554443
No 190
>PLN02429 triosephosphate isomerase
Probab=40.07 E-value=64 Score=31.80 Aligned_cols=60 Identities=18% Similarity=0.364 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHHHHH-CCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEeEecCCccCcc
Q 012236 148 KQVHQVDQFLRKWLMD-HPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGYILGNPKTDKI 218 (467)
Q Consensus 148 ~~a~~~~~fL~~F~~~-fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~iGng~i~p~ 218 (467)
+.++.+.+++++++.. +.+-....+-|. |||---|.-+..|.... ++.|+.||.+.+++.
T Consensus 239 e~~~~v~~~IR~~l~~~~~~~va~~irIL---YGGSV~~~N~~el~~~~--------diDG~LVGgASL~~~ 299 (315)
T PLN02429 239 QQAQEVHVAVRGWLKKNVSEEVASKTRII---YGGSVNGGNSAELAKEE--------DIDGFLVGGASLKGP 299 (315)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhccCceEE---EcCccCHHHHHHHhcCC--------CCCEEEeecceecHH
Confidence 5677789999998864 422212233333 89999999999998754 589999999999875
No 191
>PLN02442 S-formylglutathione hydrolase
Probab=40.05 E-value=41 Score=32.48 Aligned_cols=49 Identities=16% Similarity=0.037 Sum_probs=35.4
Q ss_pred hcCCeEEEEcCCCccccCch-hHHHHHHhcCCCCccCccceeeCCeeeeEEEEEecceEEEEEcCCccccc
Q 012236 378 TKGYRSLIYSGDHDMVVPFL-GTEAWIKSLNYSIIDDWRPWILHSQVAGYTRTYSNRMTYATVKGGGHIAP 447 (467)
Q Consensus 378 ~~~irVLiY~Gd~D~i~n~~-Gt~~wi~~L~w~~~~~~~~w~~~~~~aG~~k~~~~~Ltf~~V~~AGHmvP 447 (467)
..+.+|+|.+|+.|.+|+.. .++.+.+.++ . .+...++....+++|-..
T Consensus 215 ~~~~pvli~~G~~D~~v~~~~~s~~~~~~l~---------------~------~g~~~~~~~~pg~~H~~~ 264 (283)
T PLN02442 215 DVSATILIDQGEADKFLKEQLLPENFEEACK---------------E------AGAPVTLRLQPGYDHSYF 264 (283)
T ss_pred ccCCCEEEEECCCCccccccccHHHHHHHHH---------------H------cCCCeEEEEeCCCCccHH
Confidence 34689999999999999974 4566655543 1 112478888999999755
No 192
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=39.57 E-value=20 Score=32.83 Aligned_cols=102 Identities=23% Similarity=0.205 Sum_probs=63.4
Q ss_pred CceEEEEEEecCCCCCCCCEEEEECCCCchHHHhHHHHhhCceEEeccCCCCCCCcceeCCCCcccCCceEEEecCCccc
Q 012236 53 DAQLFYYFVKSEKNPKEDPLLLWLTGGPGCSAFSALVYEIGPINFNILEYNGSLPTLHLNPYSWTKEASILFVDSPVGTG 132 (467)
Q Consensus 53 ~~~lfy~f~es~~~~~~~p~~lwlnGGPG~Ss~~g~~~E~GP~~~~~~~~~~~~~~~~~n~~sW~~~an~l~iDqPvG~G 132 (467)
+..|.|.-+-+ -+--||.+-|--||+-.+ -+|-..+- ++ -....++-+|.| |.|
T Consensus 30 g~ql~y~~~G~-----G~~~iLlipGalGs~~tD-----f~pql~~l------------~k---~l~~TivawDPp-GYG 83 (277)
T KOG2984|consen 30 GTQLGYCKYGH-----GPNYILLIPGALGSYKTD-----FPPQLLSL------------FK---PLQVTIVAWDPP-GYG 83 (277)
T ss_pred CceeeeeecCC-----CCceeEeccccccccccc-----CCHHHHhc------------CC---CCceEEEEECCC-CCC
Confidence 57788863322 234678888888887653 22221111 10 112678999955 888
Q ss_pred cccccCCC---CcccCchHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHH
Q 012236 133 FSYVRTPL---ASQTGDFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQ 190 (467)
Q Consensus 133 fS~~~~~~---~~~~~~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~ 190 (467)
-|...... .+...|.+.|-|+.+.|+ -.+|-|.|-|=||.-.-..|.+
T Consensus 84 ~SrPP~Rkf~~~ff~~Da~~avdLM~aLk----------~~~fsvlGWSdGgiTalivAak 134 (277)
T KOG2984|consen 84 TSRPPERKFEVQFFMKDAEYAVDLMEALK----------LEPFSVLGWSDGGITALIVAAK 134 (277)
T ss_pred CCCCCcccchHHHHHHhHHHHHHHHHHhC----------CCCeeEeeecCCCeEEEEeecc
Confidence 88754321 123456667777776663 3479999999999987777654
No 193
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=39.38 E-value=1.5e+02 Score=31.73 Aligned_cols=48 Identities=19% Similarity=0.180 Sum_probs=37.1
Q ss_pred CCeEEEEcCCCccccCchhHHHHHHhcCCCCccCccceeeCCeeeeEEEEEecceEEEEEcCCcccccCCChH
Q 012236 380 GYRSLIYSGDHDMVVPFLGTEAWIKSLNYSIIDDWRPWILHSQVAGYTRTYSNRMTYATVKGGGHIAPEYRPA 452 (467)
Q Consensus 380 ~irVLiY~Gd~D~i~n~~Gt~~wi~~L~w~~~~~~~~w~~~~~~aG~~k~~~~~Ltf~~V~~AGHmvP~DqP~ 452 (467)
.+++|+..|..|.++++..++...+.+. +-...++.++||+++.++|.
T Consensus 415 ~vPvLvV~G~~D~IvP~~sa~~l~~~i~-------------------------~~~~~vL~~sGHi~~ienPp 462 (532)
T TIGR01838 415 KVPVYIIATREDHIAPWQSAYRGAALLG-------------------------GPKTFVLGESGHIAGVVNPP 462 (532)
T ss_pred CCCEEEEeeCCCCcCCHHHHHHHHHHCC-------------------------CCEEEEECCCCCchHhhCCC
Confidence 5899999999999999998887765533 12224678999998888774
No 194
>PF08139 LPAM_1: Prokaryotic membrane lipoprotein lipid attachment site; InterPro: IPR012640 In prokaryotes, membrane lipoproteins are synthesized with a precursor signal peptide, which is cleaved by a specific lipoprotein signal peptidase (signal peptidase II). The peptidase recognises a conserved sequence and cuts upstream of a cysteine residue to which a glyceride-fatty acid lipid is attached [,]. This lipid attachment site is found in homologues of the VirB proteins of type IV secretion systems (T4SS). Conjugal transfer across the cell envelope of Gram-negative bacteria is mediated by a supramolecular structure termed mating pair formation (Mpf) complex. Collectively, secretion pathways ancestrally related to bacterial conjugation systems are now known as T4SS. T4SS are involved in the delivery of effector molecules to eukaryotic target cells; each of these systems exports distinct DNA or protein substrates to effect a myriad of changes in host cell physiology during infection [].
Probab=39.16 E-value=22 Score=20.82 Aligned_cols=13 Identities=46% Similarity=0.741 Sum_probs=7.3
Q ss_pred hhhHHHHHHHHHH
Q 012236 2 AKLCFSLLLLWQL 14 (467)
Q Consensus 2 ~~~~~~~~~~~~~ 14 (467)
+|+++.+++++.+
T Consensus 8 Kkil~~l~a~~~L 20 (25)
T PF08139_consen 8 KKILFPLLALFML 20 (25)
T ss_pred HHHHHHHHHHHHH
Confidence 6666666554433
No 195
>PF00681 Plectin: Plectin repeat; InterPro: IPR001101 Plectin may have a role in cross-linking intermediate filaments, in inter-linking intermediate filaments with microtubules and microfilaments and in anchoring intermediate filaments to the plasma and nuclear membranes. Plectin is recruited into hemidesmosomes, multiprotein complexes that facilitate adhesion of epithelia to the basement membrane, thereby providing linkage between the intracellular keratin filaments to the laminins of the extracellular matrix. Plectin binds to hemidesmosomes through association of its actin-binding domain with the first pair of fibronectin type III repeats and a small part of the connecting segment of the integrin-beta4 subunit, the latter (integrin-alpha6,beta4) acting as a receptor for the extracellular matrix component laminin-5. The plectin repeat is also seen in the cell adhesion junction plaque proteins, desmoplakin, envoplakin, and bullous pemphigoid antigen. The domains in plakins show considerable sequence homology. The N terminus consists of a plakin domain containing a number of subdomains with high alpha-helical content, while the central coiled-coil domain is composed of heptad repeats involved in the dimerisation of plakin, and the C terminus contains one or more homologous repeat sequences referred to plectin repeats []. This entry represents the plectin repeats found in the C terminus of plakin proteins.; GO: 0005856 cytoskeleton; PDB: 1LM7_A 1LM5_A.
Probab=38.45 E-value=16 Score=24.61 Aligned_cols=33 Identities=18% Similarity=0.099 Sum_probs=23.6
Q ss_pred CCccCcccccccccccccccCCCCHHHHHHHHH
Q 012236 212 NPKTDKIVDKNSQIPFAHGMGLISNELYESLKI 244 (467)
Q Consensus 212 ng~i~p~~q~~~~~~~~~~~gli~~~~~~~~~~ 244 (467)
.|.+||..-..--.+=|++.|+||++....+.+
T Consensus 11 gGiidp~tg~~lsv~~A~~~glId~~~~~~L~e 43 (45)
T PF00681_consen 11 GGIIDPETGERLSVEEAIQRGLIDSDTAQKLLE 43 (45)
T ss_dssp TSEEETTTTEEEEHHHHHHTTSS-HHHHHHHHH
T ss_pred eeEEeCCCCeEEcHHHHHHCCCcCHHHHHHHHc
Confidence 377888865554556688999999998777653
No 196
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=37.61 E-value=78 Score=31.55 Aligned_cols=61 Identities=18% Similarity=0.186 Sum_probs=43.9
Q ss_pred CcccCchHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEeEecCCccC
Q 012236 141 ASQTGDFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGYILGNPKTD 216 (467)
Q Consensus 141 ~~~~~~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~iGng~i~ 216 (467)
.++.++..+++.+.+|-.+-+ .|+..++.|.|-|-||.-+...|+. .-++|++++-.-+=|
T Consensus 286 P~p~n~~nA~DaVvQfAI~~L----gf~~edIilygWSIGGF~~~waAs~-----------YPdVkavvLDAtFDD 346 (517)
T KOG1553|consen 286 PYPVNTLNAADAVVQFAIQVL----GFRQEDIILYGWSIGGFPVAWAASN-----------YPDVKAVVLDATFDD 346 (517)
T ss_pred CCcccchHHHHHHHHHHHHHc----CCCccceEEEEeecCCchHHHHhhc-----------CCCceEEEeecchhh
Confidence 356777777777777665432 3557799999999999988888853 456899987655433
No 197
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=37.53 E-value=67 Score=30.21 Aligned_cols=62 Identities=23% Similarity=0.384 Sum_probs=46.7
Q ss_pred CeEEEEcCCCccccCchhHHHHHHhcCCCCccCccceeeCCeeeeEEEEEecceEEEEEcCCcccccCCChH---HHHHH
Q 012236 381 YRSLIYSGDHDMVVPFLGTEAWIKSLNYSIIDDWRPWILHSQVAGYTRTYSNRMTYATVKGGGHIAPEYRPA---ECYAM 457 (467)
Q Consensus 381 irVLiY~Gd~D~i~n~~Gt~~wi~~L~w~~~~~~~~w~~~~~~aG~~k~~~~~Ltf~~V~~AGHmvP~DqP~---~a~~m 457 (467)
.++|+.+|..|.+++....+....... +.....+.+.+++|....+.+. .++.-
T Consensus 233 ~P~l~~~G~~D~~vp~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~ 289 (299)
T COG1073 233 RPVLLVHGERDEVVPLRDAEDLYEAAR-----------------------ERPKKLLFVPGGGHIDLYDNPPAVEQALDK 289 (299)
T ss_pred cceEEEecCCCcccchhhhHHHHhhhc-----------------------cCCceEEEecCCccccccCccHHHHHHHHH
Confidence 799999999999999887766654422 1146778899999999987666 57777
Q ss_pred HHHHHcCC
Q 012236 458 FQRWINHD 465 (467)
Q Consensus 458 ~~~fl~~~ 465 (467)
+.+|+...
T Consensus 290 ~~~f~~~~ 297 (299)
T COG1073 290 LAEFLERH 297 (299)
T ss_pred HHHHHHHh
Confidence 77777543
No 198
>PF15613 WHIM2: WSTF, HB1, Itc1p, MBD9 motif 2
Probab=37.33 E-value=66 Score=20.94 Aligned_cols=28 Identities=18% Similarity=0.332 Sum_probs=15.7
Q ss_pred ceEEEEEEecCCCCCCCCEEEEECCCCc
Q 012236 54 AQLFYYFVKSEKNPKEDPLLLWLTGGPG 81 (467)
Q Consensus 54 ~~lfy~f~es~~~~~~~p~~lwlnGGPG 81 (467)
.+-+|||-.+........--+|+.+||+
T Consensus 11 ~NrYwwf~~s~~~~~~~~~~~~v~~~~~ 38 (38)
T PF15613_consen 11 GNRYWWFSSSSSNSQYYNGGRFVEQGPD 38 (38)
T ss_pred CceEEEEecccccCCCCCceEEEEeCCC
Confidence 4567777455444344445556666664
No 199
>cd00311 TIM Triosephosphate isomerase (TIM) is a glycolytic enzyme that catalyzes the interconversion of dihydroxyacetone phosphate and D-glyceraldehyde-3-phosphate. The reaction is very efficient and requires neither cofactors nor metal ions. TIM, usually homodimeric, but in some organisms tetrameric, is ubiqitous and conserved in function across eukaryotes, bacteria and archaea.
Probab=37.29 E-value=96 Score=29.37 Aligned_cols=59 Identities=20% Similarity=0.401 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHHHHH-CCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEeEecCCccCcc
Q 012236 148 KQVHQVDQFLRKWLMD-HPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGYILGNPKTDKI 218 (467)
Q Consensus 148 ~~a~~~~~fL~~F~~~-fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~iGng~i~p~ 218 (467)
+.+.+...++++++.. +.+ ....+-|. |||---|.=+..+++.. ++.|+.||.+.+++.
T Consensus 176 ~~~~ev~~~ir~~l~~~~~~-~~~~~~Il---YGGSV~~~N~~~l~~~~--------~vDG~LVG~Asl~~~ 235 (242)
T cd00311 176 EQAQEVHAFIRKLLAELYGE-VAEKVRIL---YGGSVNPENAAELLAQP--------DIDGVLVGGASLKAE 235 (242)
T ss_pred HHHHHHHHHHHHHHHHhccc-ccCceeEE---ECCCCCHHHHHHHhcCC--------CCCEEEeehHhhCHH
Confidence 4567788999998864 433 22334333 99999999999998854 589999999998864
No 200
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=35.78 E-value=24 Score=32.62 Aligned_cols=48 Identities=21% Similarity=0.235 Sum_probs=28.0
Q ss_pred CCeEEEEcCCCccccCchhH-HHHHHhcCCCCccCccceeeCCeeeeEEEEEecceEEEEEcCCcccc
Q 012236 380 GYRSLIYSGDHDMVVPFLGT-EAWIKSLNYSIIDDWRPWILHSQVAGYTRTYSNRMTYATVKGGGHIA 446 (467)
Q Consensus 380 ~irVLiY~Gd~D~i~n~~Gt-~~wi~~L~w~~~~~~~~w~~~~~~aG~~k~~~~~Ltf~~V~~AGHmv 446 (467)
+-+||+.+|..|.+-|..-- +..++.|+=.+. .+ +++.+...+|||+.
T Consensus 115 ~~piLli~g~dD~~WpS~~~a~~i~~rL~~~~~-----------------~~--~~~~l~Y~~aGH~i 163 (213)
T PF08840_consen 115 KGPILLISGEDDQIWPSSEMAEQIEERLKAAGF-----------------PH--NVEHLSYPGAGHLI 163 (213)
T ss_dssp -SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT------------------------EEEEETTB-S--
T ss_pred CCCEEEEEeCCCCccchHHHHHHHHHHHHHhCC-----------------CC--cceEEEcCCCCcee
Confidence 57999999999999887654 445555542221 12 48889999999996
No 201
>PF07389 DUF1500: Protein of unknown function (DUF1500); InterPro: IPR009974 This family consists of several Orthopoxvirus specific proteins, which include Vaccinia virus, B6 protein, they are around 100 residues in length. The function of this family is unknown.
Probab=35.66 E-value=27 Score=27.03 Aligned_cols=34 Identities=24% Similarity=0.486 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHh
Q 012236 152 QVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISN 193 (467)
Q Consensus 152 ~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~ 193 (467)
++|.+.+.|+.++ |-.+.|.+.|+|| .|-+.|.+
T Consensus 8 dIYDAvRaflLr~--Y~~KrfIV~g~S~------~IlhNIyr 41 (100)
T PF07389_consen 8 DIYDAVRAFLLRH--YYDKRFIVYGRSN------AILHNIYR 41 (100)
T ss_pred hHHHHHHHHHHHH--HccceEEEecchH------HHHHHHHH
Confidence 4778888887765 5577899999999 46666655
No 202
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=35.27 E-value=23 Score=36.00 Aligned_cols=38 Identities=21% Similarity=0.207 Sum_probs=23.6
Q ss_pred CeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEeEecCCccCccc
Q 012236 171 PFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGYILGNPKTDKIV 219 (467)
Q Consensus 171 ~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~iGng~i~p~~ 219 (467)
.+.++|+||||--+-..+.+- ..++..++.|||+-|..
T Consensus 229 ~i~~~GHSFGGATa~~~l~~d-----------~r~~~~I~LD~W~~Pl~ 266 (379)
T PF03403_consen 229 RIGLAGHSFGGATALQALRQD-----------TRFKAGILLDPWMFPLG 266 (379)
T ss_dssp EEEEEEETHHHHHHHHHHHH------------TT--EEEEES---TTS-
T ss_pred heeeeecCchHHHHHHHHhhc-----------cCcceEEEeCCcccCCC
Confidence 589999999997666444332 14788899999998863
No 203
>PLN02561 triosephosphate isomerase
Probab=33.40 E-value=1e+02 Score=29.47 Aligned_cols=59 Identities=19% Similarity=0.398 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHHHHHH-CCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEeEecCCccCc
Q 012236 148 KQVHQVDQFLRKWLMD-HPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGYILGNPKTDK 217 (467)
Q Consensus 148 ~~a~~~~~fL~~F~~~-fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~iGng~i~p 217 (467)
+.++++.+++++++.. |..-....+-|. |||---|.-+..|.... ++.|++||.+-+++
T Consensus 180 ~~~~~v~~~Ir~~l~~~~~~~~a~~i~IL---YGGSV~~~N~~~l~~~~--------~iDG~LVG~ASL~~ 239 (253)
T PLN02561 180 AQAQEVHDELRKWLHKNVSPEVAATTRII---YGGSVTGANCKELAAQP--------DVDGFLVGGASLKP 239 (253)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccceEE---EeCCcCHHHHHHHhcCC--------CCCeEEEehHhhHH
Confidence 5677788999988753 432222233333 89999999999998754 69999999999987
No 204
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=32.67 E-value=39 Score=34.43 Aligned_cols=62 Identities=13% Similarity=0.139 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhc-ccCCCCceeeeEeEecCCccCc
Q 012236 152 QVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNEN-EEGIKPLINLQGYILGNPKTDK 217 (467)
Q Consensus 152 ~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n-~~~~~~~inLkGi~iGng~i~p 217 (467)
+++.-|++.++.--+..++++.|.|||.||-++-++-....+.. + +..|. +=|.||-|+...
T Consensus 101 ~~~~~lk~~ie~~~~~~~~kv~li~HSmGgl~~~~fl~~~~~~~W~---~~~i~-~~i~i~~p~~Gs 163 (389)
T PF02450_consen 101 EYFTKLKQLIEEAYKKNGKKVVLIAHSMGGLVARYFLQWMPQEEWK---DKYIK-RFISIGTPFGGS 163 (389)
T ss_pred HHHHHHHHHHHHHHHhcCCcEEEEEeCCCchHHHHHHHhccchhhH---Hhhhh-EEEEeCCCCCCC
Confidence 34445555554322233789999999999999988777664331 0 11232 556667766643
No 205
>COG0221 Ppa Inorganic pyrophosphatase [Energy production and conversion]
Probab=32.62 E-value=89 Score=27.90 Aligned_cols=66 Identities=14% Similarity=0.064 Sum_probs=48.8
Q ss_pred ceeCCCCcccCCceEEEecCCccccccccCCCCcccC-------------------------------------------
Q 012236 109 LHLNPYSWTKEASILFVDSPVGTGFSYVRTPLASQTG------------------------------------------- 145 (467)
Q Consensus 109 ~~~n~~sW~~~an~l~iDqPvG~GfS~~~~~~~~~~~------------------------------------------- 145 (467)
-+.+.|-+.+.+..+.||++..+++.|.-+-.-++.|
T Consensus 24 ~s~~KyE~dk~~~~~~vdR~l~~~~~YP~NYGfiP~Tl~~DGDPlDvlVi~~~p~~pG~vi~~r~iG~l~m~D~~e~D~K 103 (171)
T COG0221 24 GSNIKYEVDKETGRLLVDRPLKTPMGYPVNYGFIPNTLSDDGDPLDVLVIGEEPLAPGCVIQARPIGVLKMIDEGEKDDK 103 (171)
T ss_pred CCccceEEeeecCceeeeecCCCCCcCCccccccCCcccCCCCceEEEEEcCcCCCceeEEEEEEEEEEEEeeCCCcceE
Confidence 4458899999999999999999998885433222111
Q ss_pred ----------------chHHHHHHHHHHHHHHHHCCCCCCCCeEE
Q 012236 146 ----------------DFKQVHQVDQFLRKWLMDHPEFLSNPFYV 174 (467)
Q Consensus 146 ----------------~~~~a~~~~~fL~~F~~~fp~~~~~~~~i 174 (467)
..++.+.+.+-++.||+.|+.+....+..
T Consensus 104 viav~~~dp~~~~i~di~d~~~~~~~~i~~ffe~yK~le~~k~~~ 148 (171)
T COG0221 104 VIAVPKLDPRYEHIKDISDLPEHLLDEIQHFFETYKDLEKGKWVK 148 (171)
T ss_pred EEEecCCCcchhhccchhHHHHHHHHHHHHHHHHHHhcCCCcEEE
Confidence 14577888899999999999988743333
No 206
>PTZ00333 triosephosphate isomerase; Provisional
Probab=31.48 E-value=1.1e+02 Score=29.24 Aligned_cols=60 Identities=18% Similarity=0.423 Sum_probs=44.2
Q ss_pred hHHHHHHHHHHHHHHHH-CCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEeEecCCccCc
Q 012236 147 FKQVHQVDQFLRKWLMD-HPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGYILGNPKTDK 217 (467)
Q Consensus 147 ~~~a~~~~~fL~~F~~~-fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~iGng~i~p 217 (467)
.+.+++++.++++++.. |........-|. |||---|.-+..|.... ++.|++||.+.+++
T Consensus 182 ~e~i~~~~~~IR~~l~~~~~~~~~~~~~IL---YGGSV~~~N~~~l~~~~--------~vDG~LvG~asl~~ 242 (255)
T PTZ00333 182 PEQAQEVHAFIRKWLAEKVGADVAEATRII---YGGSVNEKNCKELIKQP--------DIDGFLVGGASLKP 242 (255)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccceEE---EcCCCCHHHHHHHhcCC--------CCCEEEEehHhhhh
Confidence 46778899999998753 432222233333 89999999999998754 58999999998874
No 207
>PRK00042 tpiA triosephosphate isomerase; Provisional
Probab=31.48 E-value=1.4e+02 Score=28.47 Aligned_cols=59 Identities=19% Similarity=0.360 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHHHHH-CCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEeEecCCccCcc
Q 012236 148 KQVHQVDQFLRKWLMD-HPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGYILGNPKTDKI 218 (467)
Q Consensus 148 ~~a~~~~~fL~~F~~~-fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~iGng~i~p~ 218 (467)
+.++++.+|+++++.. |.+- ...+-|. |||---|.-+..+.... ++.|+.||.+.+++.
T Consensus 180 ~~~~~v~~~Ir~~l~~~~~~~-~~~~~Il---YGGSV~~~N~~~l~~~~--------~vDG~LVG~Asl~~~ 239 (250)
T PRK00042 180 EQAQEVHAFIRAVLAELYGEV-AEKVRIL---YGGSVKPDNAAELMAQP--------DIDGALVGGASLKAE 239 (250)
T ss_pred HHHHHHHHHHHHHHHHhcccc-cCCceEE---EcCCCCHHHHHHHhcCC--------CCCEEEEeeeeechH
Confidence 5677888999988753 3311 2233333 99999999999998854 589999999998775
No 208
>COG0218 Predicted GTPase [General function prediction only]
Probab=31.36 E-value=64 Score=29.51 Aligned_cols=63 Identities=24% Similarity=0.328 Sum_probs=36.1
Q ss_pred CCCCCEEEEECCCC--chHHHhHHHHh-hCceEEeccCCCCCCCcceeCCCCcccCCceEEEecCCccccccc
Q 012236 67 PKEDPLLLWLTGGP--GCSAFSALVYE-IGPINFNILEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGFSYV 136 (467)
Q Consensus 67 ~~~~p~~lwlnGGP--G~Ss~~g~~~E-~GP~~~~~~~~~~~~~~~~~n~~sW~~~an~l~iDqPvG~GfS~~ 136 (467)
|.++..=|-|-|.- |=||++-.+.- -+=-+... ..| -|-..|-+.|.+. +.+||-| |.||..+
T Consensus 20 P~~~~~EIaF~GRSNVGKSSlIN~l~~~k~LArtSk--tPG--rTq~iNff~~~~~--~~lVDlP-GYGyAkv 85 (200)
T COG0218 20 PEDDLPEIAFAGRSNVGKSSLINALTNQKNLARTSK--TPG--RTQLINFFEVDDE--LRLVDLP-GYGYAKV 85 (200)
T ss_pred CCCCCcEEEEEccCcccHHHHHHHHhCCcceeecCC--CCC--ccceeEEEEecCc--EEEEeCC-CcccccC
Confidence 34443334444544 89998865552 21112211 012 2577788888877 8899999 6666543
No 209
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=30.54 E-value=1.1e+02 Score=29.35 Aligned_cols=64 Identities=19% Similarity=0.249 Sum_probs=39.2
Q ss_pred CchHHHHHHHHHHHHHHH-HCC-----CCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEeEecCCcc
Q 012236 145 GDFKQVHQVDQFLRKWLM-DHP-----EFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGYILGNPKT 215 (467)
Q Consensus 145 ~~~~~a~~~~~fL~~F~~-~fp-----~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~iGng~i 215 (467)
.+.+.+.++.+||.+=++ ..| .+ ..+.|+|||=||+-+-.+|... .+ ....+++++++..+|+=
T Consensus 62 ~~~~~~~~vi~Wl~~~L~~~l~~~v~~D~--s~l~l~GHSrGGk~Af~~al~~--~~---~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 62 DEVASAAEVIDWLAKGLESKLPLGVKPDF--SKLALAGHSRGGKVAFAMALGN--AS---SSLDLRFSALILLDPVD 131 (259)
T ss_pred hhHHHHHHHHHHHHhcchhhccccccccc--cceEEeeeCCCCHHHHHHHhhh--cc---cccccceeEEEEecccc
Confidence 455667777777665222 222 22 2599999999999444433322 11 12246799999888875
No 210
>PF15253 STIL_N: SCL-interrupting locus protein N-terminus
Probab=30.52 E-value=59 Score=33.14 Aligned_cols=36 Identities=22% Similarity=0.690 Sum_probs=28.1
Q ss_pred eeEeeeEEecCCCCceEEEEEEecCCCCCCCCEE-EEECC
Q 012236 40 ELETGYVGVGESEDAQLFYYFVKSEKNPKEDPLL-LWLTG 78 (467)
Q Consensus 40 ~~~sGy~~~~~~~~~~lfy~f~es~~~~~~~p~~-lwlnG 78 (467)
....|||+.+. .+++.. ..|+.....+-||| +||.|
T Consensus 199 ~~k~GfLTmDq--tRkl~l-LlesDpk~~slPLVGiWlsG 235 (410)
T PF15253_consen 199 TYKSGFLTMDQ--TRKLLL-LLESDPKASSLPLVGIWLSG 235 (410)
T ss_pred ccccceeeEcc--ccceEE-EeccCCCccCCCceeeEecC
Confidence 35799999986 577877 77877666777876 89986
No 211
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=29.92 E-value=76 Score=28.18 Aligned_cols=54 Identities=26% Similarity=0.443 Sum_probs=37.1
Q ss_pred CeEEEEcCCCccccCchhHHHHHHhcCCCCccCccceeeCCeeeeEEEEEecceEEEEEcCCcccccCC---ChHHHHHH
Q 012236 381 YRSLIYSGDHDMVVPFLGTEAWIKSLNYSIIDDWRPWILHSQVAGYTRTYSNRMTYATVKGGGHIAPEY---RPAECYAM 457 (467)
Q Consensus 381 irVLiY~Gd~D~i~n~~Gt~~wi~~L~w~~~~~~~~w~~~~~~aG~~k~~~~~Ltf~~V~~AGHmvP~D---qP~~a~~m 457 (467)
++.+++.++.|..|++.-++.+.+.++ ..++.+.++||+-..+ +=.+.+++
T Consensus 115 ~~~~viaS~nDp~vp~~~a~~~A~~l~--------------------------a~~~~~~~~GHf~~~~G~~~~p~~~~~ 168 (171)
T PF06821_consen 115 FPSIVIASDNDPYVPFERAQRLAQRLG--------------------------AELIILGGGGHFNAASGFGPWPEGLDL 168 (171)
T ss_dssp CCEEEEEETTBSSS-HHHHHHHHHHHT---------------------------EEEEETS-TTSSGGGTHSS-HHHHHH
T ss_pred CCeEEEEcCCCCccCHHHHHHHHHHcC--------------------------CCeEECCCCCCcccccCCCchHHHHHH
Confidence 455899999999999999988888754 5578899999997654 22344555
Q ss_pred HHH
Q 012236 458 FQR 460 (467)
Q Consensus 458 ~~~ 460 (467)
++|
T Consensus 169 l~~ 171 (171)
T PF06821_consen 169 LQR 171 (171)
T ss_dssp HH-
T ss_pred hcC
Confidence 543
No 212
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=29.42 E-value=28 Score=33.75 Aligned_cols=90 Identities=14% Similarity=0.169 Sum_probs=48.5
Q ss_pred ccCCceEEEecCCccccccccCCCCc-ccCchHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhc
Q 012236 117 TKEASILFVDSPVGTGFSYVRTPLAS-QTGDFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNEN 195 (467)
Q Consensus 117 ~~~an~l~iDqPvG~GfS~~~~~~~~-~~~~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n 195 (467)
.++.-++=||-| |-..--.+-+.+| .-+.++.|+++-..|..| .+ +.+.-.|+-=|+.-...+|-. ..
T Consensus 53 ~~~f~i~Hi~aP-Gqe~ga~~~p~~y~yPsmd~LAe~l~~Vl~~f-----~l--k~vIg~GvGAGAnIL~rfAl~---~p 121 (283)
T PF03096_consen 53 LQNFCIYHIDAP-GQEEGAATLPEGYQYPSMDQLAEMLPEVLDHF-----GL--KSVIGFGVGAGANILARFALK---HP 121 (283)
T ss_dssp HTTSEEEEEE-T-TTSTT-----TT-----HHHHHCTHHHHHHHH-----T-----EEEEEETHHHHHHHHHHHH---SG
T ss_pred hhceEEEEEeCC-CCCCCcccccccccccCHHHHHHHHHHHHHhC-----Cc--cEEEEEeeccchhhhhhcccc---Cc
Confidence 456778889977 6655433333332 247789999988888765 22 358888887666655666632 22
Q ss_pred ccCCCCceeeeEeEecCCccCcccccccccccc
Q 012236 196 EEGIKPLINLQGYILGNPKTDKIVDKNSQIPFA 228 (467)
Q Consensus 196 ~~~~~~~inLkGi~iGng~i~p~~q~~~~~~~~ 228 (467)
+ .+-|+++.|+.... .++.+++
T Consensus 122 ~-------~V~GLiLvn~~~~~----~gw~Ew~ 143 (283)
T PF03096_consen 122 E-------RVLGLILVNPTCTA----AGWMEWF 143 (283)
T ss_dssp G-------GEEEEEEES---S-------HHHHH
T ss_pred c-------ceeEEEEEecCCCC----ccHHHHH
Confidence 1 38899988876543 3455443
No 213
>PRK06762 hypothetical protein; Provisional
Probab=28.74 E-value=31 Score=30.09 Aligned_cols=21 Identities=19% Similarity=0.420 Sum_probs=15.2
Q ss_pred CEEEEECCCCch--HHHhHHHHh
Q 012236 71 PLLLWLTGGPGC--SAFSALVYE 91 (467)
Q Consensus 71 p~~lwlnGGPG~--Ss~~g~~~E 91 (467)
|.+||+.|.||| |.+...+.|
T Consensus 2 ~~li~i~G~~GsGKST~A~~L~~ 24 (166)
T PRK06762 2 TTLIIIRGNSGSGKTTIAKQLQE 24 (166)
T ss_pred CeEEEEECCCCCCHHHHHHHHHH
Confidence 789999999987 445454543
No 214
>PF03283 PAE: Pectinacetylesterase
Probab=28.56 E-value=4.6e+02 Score=26.44 Aligned_cols=154 Identities=16% Similarity=0.165 Sum_probs=77.7
Q ss_pred ceEEEEEEecCCCCCCCCEEEEECCCCchHHHhH----HHHhhCceEEeccC--CCCC-CCcceeCCCCcccCCceEEEe
Q 012236 54 AQLFYYFVKSEKNPKEDPLLLWLTGGPGCSAFSA----LVYEIGPINFNILE--YNGS-LPTLHLNPYSWTKEASILFVD 126 (467)
Q Consensus 54 ~~lfy~f~es~~~~~~~p~~lwlnGGPG~Ss~~g----~~~E~GP~~~~~~~--~~~~-~~~~~~n~~sW~~~an~l~iD 126 (467)
+.-.|++-+. .....+-+||.|+||=-|.+..- ...+.|-..--+.. ..|- ...-..||.=|+ .|++||=
T Consensus 35 S~~~yy~~~g-~g~~s~~~li~leGGG~C~~~~tC~~r~~t~~gss~~~~~~~~~~Gils~~~~~Np~f~~--wN~V~vp 111 (361)
T PF03283_consen 35 SPPGYYFRPG-SGSGSNKWLIFLEGGGWCWDAETCAQRSSTNLGSSKNWPKTFAFSGILSNDPAENPDFYN--WNHVFVP 111 (361)
T ss_pred CCCcEEEccC-CCCCCceEEEEeccchhcCChhHHhhhccCccccccchhhhccccccccCCcccCCcccc--ccEEEEE
Confidence 4444555444 23456799999999988888542 22344433211100 0110 011344663222 6788885
Q ss_pred cCCccccccccCCCCcc-cCch-HHHHHHHHHHHHHHHH-CCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCce
Q 012236 127 SPVGTGFSYVRTPLASQ-TGDF-KQVHQVDQFLRKWLMD-HPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLI 203 (467)
Q Consensus 127 qPvG~GfS~~~~~~~~~-~~~~-~~a~~~~~fL~~F~~~-fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~i 203 (467)
-=.|.-|+-........ .+.- .-+..+.+.|...... +++ ...+.|+|-|=||.=+..-+.+|.+.-.. ..
T Consensus 112 YC~Gd~~~G~~~~~~~~~~~l~frG~~i~~avl~~l~~~gl~~--a~~vlltG~SAGG~g~~~~~d~~~~~lp~----~~ 185 (361)
T PF03283_consen 112 YCDGDSHSGDVEPVDYGGTTLYFRGYRILRAVLDDLLSNGLPN--AKQVLLTGCSAGGLGAILHADYVRDRLPS----SV 185 (361)
T ss_pred ecCCccccCcccccccCCceeEeecHHHHHHHHHHHHHhcCcc--cceEEEeccChHHHHHHHHHHHHHHHhcc----Cc
Confidence 44454444311101000 0000 1123344445545555 543 34799999999998888878777664321 24
Q ss_pred eeeEeEecCCccC
Q 012236 204 NLQGYILGNPKTD 216 (467)
Q Consensus 204 nLkGi~iGng~i~ 216 (467)
+++++.=..-++|
T Consensus 186 ~v~~~~DsG~f~d 198 (361)
T PF03283_consen 186 KVKCLSDSGFFLD 198 (361)
T ss_pred eEEEecccccccc
Confidence 5566554433444
No 215
>PF04202 Mfp-3: Foot protein 3; InterPro: IPR007328 Mytilus foot protein-3 (Mfp-3) is a highly polymorphic protein family located in the byssal adhesive plaques of blue mussels.
Probab=28.40 E-value=80 Score=23.15 Aligned_cols=33 Identities=21% Similarity=0.430 Sum_probs=13.7
Q ss_pred ChhhHHHHHHHHHHHHhhhccCCCCccccCCCCC
Q 012236 1 MAKLCFSLLLLWQLQLCMQLIDSRSTVKFLPGFQ 34 (467)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~lp~~~ 34 (467)
|..+++.+|+.+ +|+.+.+++++.---.-|++.
T Consensus 1 mnn~Si~VLlaL-vLIg~fAVqSdag~~y~p~y~ 33 (71)
T PF04202_consen 1 MNNLSIAVLLAL-VLIGSFAVQSDAGYYYYPGYN 33 (71)
T ss_pred CCchhHHHHHHH-HHHhhheeeecCccccCCCCC
Confidence 555555444322 222233333333333456663
No 216
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=28.16 E-value=73 Score=28.22 Aligned_cols=28 Identities=18% Similarity=0.456 Sum_probs=23.7
Q ss_pred CCCCCCeEEEeccCCccchHHHHHHHHh
Q 012236 166 EFLSNPFYVGGDSYSGITVPPLVQQISN 193 (467)
Q Consensus 166 ~~~~~~~~i~GESYgG~yvP~lA~~i~~ 193 (467)
.+..-|+.|-|.||||+..-.+|..+..
T Consensus 85 ~l~~gpLi~GGkSmGGR~aSmvade~~A 112 (213)
T COG3571 85 GLAEGPLIIGGKSMGGRVASMVADELQA 112 (213)
T ss_pred cccCCceeeccccccchHHHHHHHhhcC
Confidence 4556699999999999999999987754
No 217
>PRK07868 acyl-CoA synthetase; Validated
Probab=27.52 E-value=84 Score=36.41 Aligned_cols=60 Identities=10% Similarity=0.207 Sum_probs=44.2
Q ss_pred CCeEEEEcCCCccccCchhHHHHHHhcCCCCccCccceeeCCeeeeEEEEEecceEE-EEEcCCccccc---CCChHHHH
Q 012236 380 GYRSLIYSGDHDMVVPFLGTEAWIKSLNYSIIDDWRPWILHSQVAGYTRTYSNRMTY-ATVKGGGHIAP---EYRPAECY 455 (467)
Q Consensus 380 ~irVLiY~Gd~D~i~n~~Gt~~wi~~L~w~~~~~~~~w~~~~~~aG~~k~~~~~Ltf-~~V~~AGHmvP---~DqP~~a~ 455 (467)
..++|+..|..|.+++....+.+.+.+. +..+ ..+.++|||.+ ---|+...
T Consensus 297 ~~P~L~i~G~~D~ivp~~~~~~l~~~i~-------------------------~a~~~~~~~~~GH~g~~~g~~a~~~~w 351 (994)
T PRK07868 297 TCPVLAFVGEVDDIGQPASVRGIRRAAP-------------------------NAEVYESLIRAGHFGLVVGSRAAQQTW 351 (994)
T ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHhCC-------------------------CCeEEEEeCCCCCEeeeechhhhhhhC
Confidence 5899999999999999998887765532 2333 45689999944 44666667
Q ss_pred HHHHHHHcC
Q 012236 456 AMFQRWINH 464 (467)
Q Consensus 456 ~m~~~fl~~ 464 (467)
..+.+||..
T Consensus 352 p~i~~wl~~ 360 (994)
T PRK07868 352 PTVADWVKW 360 (994)
T ss_pred hHHHHHHHH
Confidence 778888763
No 218
>COG3896 Chloramphenicol 3-O-phosphotransferase [Defense mechanisms]
Probab=27.24 E-value=56 Score=28.83 Aligned_cols=27 Identities=22% Similarity=0.426 Sum_probs=21.6
Q ss_pred CCEEEEECCCC--chHHHhHHHHhh--CceE
Q 012236 70 DPLLLWLTGGP--GCSAFSALVYEI--GPIN 96 (467)
Q Consensus 70 ~p~~lwlnGGP--G~Ss~~g~~~E~--GP~~ 96 (467)
.--|+.||||| |-||+.-.|+|+ ||+.
T Consensus 22 ~griVlLNG~~saGKSSiA~A~Q~~~a~pwm 52 (205)
T COG3896 22 EGRIVLLNGGSSAGKSSIALAFQDLAAEPWM 52 (205)
T ss_pred CceEEEecCCCccchhHHHHHHHHHhhcchh
Confidence 34578899999 889999999984 6764
No 219
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=26.85 E-value=1.4e+02 Score=28.30 Aligned_cols=59 Identities=20% Similarity=0.281 Sum_probs=45.1
Q ss_pred CCeEEEEcCCCccccCchhHHHHHHhcCCCCccCccceeeCCeeeeEEEEEecceEEEEEcCCcccccCCChHHHHHHHH
Q 012236 380 GYRSLIYSGDHDMVVPFLGTEAWIKSLNYSIIDDWRPWILHSQVAGYTRTYSNRMTYATVKGGGHIAPEYRPAECYAMFQ 459 (467)
Q Consensus 380 ~irVLiY~Gd~D~i~n~~Gt~~wi~~L~w~~~~~~~~w~~~~~~aG~~k~~~~~Ltf~~V~~AGHmvP~DqP~~a~~m~~ 459 (467)
..+|.++.|+.|.+|...--..|-+..+ +.++ +.+...|||-+.+|.+..+..+.
T Consensus 176 ~~pi~~~~G~~D~~vs~~~~~~W~~~t~------------------------~~f~-l~~fdGgHFfl~~~~~~v~~~i~ 230 (244)
T COG3208 176 ACPIHAFGGEKDHEVSRDELGAWREHTK------------------------GDFT-LRVFDGGHFFLNQQREEVLARLE 230 (244)
T ss_pred CcceEEeccCcchhccHHHHHHHHHhhc------------------------CCce-EEEecCcceehhhhHHHHHHHHH
Confidence 5899999999999999886665643311 1244 45566799999999999999988
Q ss_pred HHHc
Q 012236 460 RWIN 463 (467)
Q Consensus 460 ~fl~ 463 (467)
+.+.
T Consensus 231 ~~l~ 234 (244)
T COG3208 231 QHLA 234 (244)
T ss_pred HHhh
Confidence 8874
No 220
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=26.64 E-value=1.3e+02 Score=26.82 Aligned_cols=83 Identities=12% Similarity=0.189 Sum_probs=51.0
Q ss_pred eEEEecCCccccccccCCCCcccCchHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCC
Q 012236 122 ILFVDSPVGTGFSYVRTPLASQTGDFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKP 201 (467)
Q Consensus 122 ~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~ 201 (467)
+--|+-|+..+.. .|..+..+.++++...|+++..+-| +.++.|+|-|=|+.-+-.++.. .......
T Consensus 42 ~~~V~YpA~~~~~------~y~~S~~~G~~~~~~~i~~~~~~CP---~~kivl~GYSQGA~V~~~~~~~----~~l~~~~ 108 (179)
T PF01083_consen 42 VQGVEYPASLGPN------SYGDSVAAGVANLVRLIEEYAARCP---NTKIVLAGYSQGAMVVGDALSG----DGLPPDV 108 (179)
T ss_dssp EEE--S---SCGG------SCHHHHHHHHHHHHHHHHHHHHHST---TSEEEEEEETHHHHHHHHHHHH----TTSSHHH
T ss_pred EEecCCCCCCCcc------cccccHHHHHHHHHHHHHHHHHhCC---CCCEEEEecccccHHHHHHHHh----ccCChhh
Confidence 3346677776662 1234556778889999999999988 5689999999999877666655 1000011
Q ss_pred ceeeeE-eEecCCccCc
Q 012236 202 LINLQG-YILGNPKTDK 217 (467)
Q Consensus 202 ~inLkG-i~iGng~i~p 217 (467)
.=++.+ +.+|||.-.+
T Consensus 109 ~~~I~avvlfGdP~~~~ 125 (179)
T PF01083_consen 109 ADRIAAVVLFGDPRRGA 125 (179)
T ss_dssp HHHEEEEEEES-TTTBT
T ss_pred hhhEEEEEEecCCcccC
Confidence 224666 5788887644
No 221
>cd00412 pyrophosphatase Inorganic pyrophosphatase. These enzymes hydrolyze inorganic pyrophosphate (PPi) to two molecules of orthophosphates (Pi). The reaction requires bivalent cations. The enzymes in general exist as homooligomers.
Probab=26.59 E-value=2.3e+02 Score=24.85 Aligned_cols=44 Identities=7% Similarity=-0.036 Sum_probs=31.5
Q ss_pred hHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhh
Q 012236 147 FKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNE 194 (467)
Q Consensus 147 ~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~ 194 (467)
.+....+.+-++.||+.+..+.+.+..-. +|-.-+.-|.+++++
T Consensus 109 ~Dl~~~~l~~I~~fF~~YK~le~~k~~~~----~g~~~~~~A~~~I~~ 152 (155)
T cd00412 109 SDVPPHLLDEIKHFFEHYKDLEGKKEVKV----AGWKDKEEALKIIKE 152 (155)
T ss_pred HHCCHHHHHHHHHHHHHhcccCCCCceEE----CcCcCHHHHHHHHHH
Confidence 34567788999999999988886443222 377777888877764
No 222
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=26.37 E-value=1.1e+02 Score=28.52 Aligned_cols=72 Identities=24% Similarity=0.328 Sum_probs=47.6
Q ss_pred CCeEEEEcCCCccccCchhHHHHHHhcCCCCccCccceeeCCeeeeEEEEEecceEEEEEc-CCcccccCCCh--HHHHH
Q 012236 380 GYRSLIYSGDHDMVVPFLGTEAWIKSLNYSIIDDWRPWILHSQVAGYTRTYSNRMTYATVK-GGGHIAPEYRP--AECYA 456 (467)
Q Consensus 380 ~irVLiY~Gd~D~i~n~~Gt~~wi~~L~w~~~~~~~~w~~~~~~aG~~k~~~~~Ltf~~V~-~AGHmvP~DqP--~~a~~ 456 (467)
..+||+..|+.|-+|+.....+|-++++=..+ +.-+++.|+ +.+.-.+. .+==.-|.|++ ++|++
T Consensus 164 k~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~-----------~~~~v~~f~-g~~HGf~~~r~~~~~Ped~~~~eea~~ 231 (242)
T KOG3043|consen 164 KAPILFLFAELDEDVPPKDVKAWEEKLKENPA-----------VGSQVKTFS-GVGHGFVARRANISSPEDKKAAEEAYQ 231 (242)
T ss_pred CCCEEEEeecccccCCHHHHHHHHHHHhcCcc-----------cceeEEEcC-CccchhhhhccCCCChhHHHHHHHHHH
Confidence 58999999999999999999999888762211 122455553 23322221 23233577766 67888
Q ss_pred HHHHHHc
Q 012236 457 MFQRWIN 463 (467)
Q Consensus 457 m~~~fl~ 463 (467)
.+..|++
T Consensus 232 ~~~~Wf~ 238 (242)
T KOG3043|consen 232 RFISWFK 238 (242)
T ss_pred HHHHHHH
Confidence 8888875
No 223
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=25.95 E-value=80 Score=28.05 Aligned_cols=52 Identities=12% Similarity=0.134 Sum_probs=33.2
Q ss_pred HHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEeEecCCccC
Q 012236 155 QFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGYILGNPKTD 216 (467)
Q Consensus 155 ~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~iGng~i~ 216 (467)
++++.+=+..... ..+.+|.|+|.|..-+-..+. .+. .-+++|+++..|+-.
T Consensus 41 ~W~~~l~~~i~~~-~~~~ilVaHSLGc~~~l~~l~--~~~-------~~~v~g~lLVAp~~~ 92 (171)
T PF06821_consen 41 EWVQALDQAIDAI-DEPTILVAHSLGCLTALRWLA--EQS-------QKKVAGALLVAPFDP 92 (171)
T ss_dssp HHHHHHHHCCHC--TTTEEEEEETHHHHHHHHHHH--HTC-------CSSEEEEEEES--SC
T ss_pred HHHHHHHHHHhhc-CCCeEEEEeCHHHHHHHHHHh--hcc-------cccccEEEEEcCCCc
Confidence 3444433344433 558999999999987777765 222 347999999999943
No 224
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=25.86 E-value=89 Score=29.12 Aligned_cols=94 Identities=12% Similarity=-0.001 Sum_probs=49.1
Q ss_pred CCEEEEECCCCchHHHhHHHHhhCceEEeccCCCCCCCcceeCCCCcccCCceEEEecCCccccccccCCCCcccCchHH
Q 012236 70 DPLLLWLTGGPGCSAFSALVYEIGPINFNILEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGFSYVRTPLASQTGDFKQ 149 (467)
Q Consensus 70 ~p~~lwlnGGPG~Ss~~g~~~E~GP~~~~~~~~~~~~~~~~~n~~sW~~~an~l~iDqPvG~GfS~~~~~~~~~~~~~~~ 149 (467)
...||++.|--|+....-.+...- .+. . ....+....++.-+|-.-- +|.... ....+.
T Consensus 4 g~pVlFIhG~~Gs~~q~rsl~~~~---~~~---------~--~~~~~~~~~d~ft~df~~~--~s~~~g-----~~l~~q 62 (225)
T PF07819_consen 4 GIPVLFIHGNAGSYKQVRSLASEL---QRK---------A--LLNDNSSHFDFFTVDFNEE--LSAFHG-----RTLQRQ 62 (225)
T ss_pred CCEEEEECcCCCCHhHHHHHHHHH---hhh---------h--hhccCccceeEEEeccCcc--cccccc-----ccHHHH
Confidence 467899999888877543222111 000 0 0111223356666664311 111111 122345
Q ss_pred HHHHHHHHHHHHHHC--CCCCCCCeEEEeccCCccch
Q 012236 150 VHQVDQFLRKWLMDH--PEFLSNPFYVGGDSYSGITV 184 (467)
Q Consensus 150 a~~~~~fL~~F~~~f--p~~~~~~~~i~GESYgG~yv 184 (467)
++.+.+.++...+.+ ..-..+++.|.|+|.||.-+
T Consensus 63 ~~~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlva 99 (225)
T PF07819_consen 63 AEFLAEAIKYILELYKSNRPPPRSVILVGHSMGGLVA 99 (225)
T ss_pred HHHHHHHHHHHHHhhhhccCCCCceEEEEEchhhHHH
Confidence 555666666665554 22246789999999999633
No 225
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=25.68 E-value=5.6e+02 Score=24.60 Aligned_cols=41 Identities=17% Similarity=0.124 Sum_probs=25.6
Q ss_pred HHHHHHHHHH----HHHH-CCCCCCCCeEEEeccCCccchHHHHHHHHhh
Q 012236 150 VHQVDQFLRK----WLMD-HPEFLSNPFYVGGDSYSGITVPPLVQQISNE 194 (467)
Q Consensus 150 a~~~~~fL~~----F~~~-fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~ 194 (467)
|+.+.+||.+ |.+. ++ ....+-.|+|+||||-.+-. .+++.
T Consensus 113 ~~~f~~fL~~~lkP~Ie~~y~-~~~~~~~i~GhSlGGLfvl~---aLL~~ 158 (264)
T COG2819 113 GDAFREFLTEQLKPFIEARYR-TNSERTAIIGHSLGGLFVLF---ALLTY 158 (264)
T ss_pred hHHHHHHHHHhhHHHHhcccc-cCcccceeeeecchhHHHHH---HHhcC
Confidence 4446666654 4443 43 23345999999999988754 44554
No 226
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=25.61 E-value=3.9e+02 Score=27.16 Aligned_cols=133 Identities=20% Similarity=0.282 Sum_probs=73.2
Q ss_pred CCceEEEEEEe-cCC-CCCC-CCEEEEECCCCchHHHhHHHHhhCceEEeccCCCCCCCcceeCCCCcccCCceEEEecC
Q 012236 52 EDAQLFYYFVK-SEK-NPKE-DPLLLWLTGGPGCSAFSALVYEIGPINFNILEYNGSLPTLHLNPYSWTKEASILFVDSP 128 (467)
Q Consensus 52 ~~~~lfy~f~e-s~~-~~~~-~p~~lwlnGGPG~Ss~~g~~~E~GP~~~~~~~~~~~~~~~~~n~~sW~~~an~l~iDqP 128 (467)
+|-+++|--.. ++. ..++ .| +|.++|=||+=-.+-=|. |..-++..- | ..++| ...||----|
T Consensus 132 eGL~iHFlhvk~p~~k~~k~v~P-lLl~HGwPGsv~EFykfI---PlLT~p~~h-g-----~~~d~----~FEVI~PSlP 197 (469)
T KOG2565|consen 132 EGLKIHFLHVKPPQKKKKKKVKP-LLLLHGWPGSVREFYKFI---PLLTDPKRH-G-----NESDY----AFEVIAPSLP 197 (469)
T ss_pred cceeEEEEEecCCccccCCcccc-eEEecCCCchHHHHHhhh---hhhcCcccc-C-----Cccce----eEEEeccCCC
Confidence 45678886543 221 1222 35 456899999765543332 554443100 0 01111 2355555546
Q ss_pred CccccccccCCCCcccCchHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEe
Q 012236 129 VGTGFSYVRTPLASQTGDFKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGY 208 (467)
Q Consensus 129 vG~GfS~~~~~~~~~~~~~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi 208 (467)
|.|||...+..++ +..++|.-|...|.+ +.-++|||=|--||-...--+|+.. +-|+.|+
T Consensus 198 -GygwSd~~sk~GF--n~~a~ArvmrkLMlR-------Lg~nkffiqGgDwGSiI~snlasLy----------PenV~Gl 257 (469)
T KOG2565|consen 198 -GYGWSDAPSKTGF--NAAATARVMRKLMLR-------LGYNKFFIQGGDWGSIIGSNLASLY----------PENVLGL 257 (469)
T ss_pred -CcccCcCCccCCc--cHHHHHHHHHHHHHH-------hCcceeEeecCchHHHHHHHHHhhc----------chhhhHh
Confidence 9999988776654 555666655555532 3356899987555544444444322 2367787
Q ss_pred EecCCccCcc
Q 012236 209 ILGNPKTDKI 218 (467)
Q Consensus 209 ~iGng~i~p~ 218 (467)
=+.+..+.|.
T Consensus 258 Hlnm~~~~s~ 267 (469)
T KOG2565|consen 258 HLNMCFVNSP 267 (469)
T ss_pred hhcccccCCc
Confidence 7777777664
No 227
>PF07849 DUF1641: Protein of unknown function (DUF1641); InterPro: IPR012440 Archaeal and bacterial hypothetical proteins are found in this family, with the region in question being approximately 40 residues long.
Probab=25.31 E-value=26 Score=23.33 Aligned_cols=16 Identities=19% Similarity=0.133 Sum_probs=13.2
Q ss_pred hcccCcHHHHHHcCCC
Q 012236 331 QNWENDYNVRKALQIR 346 (467)
Q Consensus 331 ~~ylN~~~Vk~aLhv~ 346 (467)
-.-|++||||++|++-
T Consensus 17 ~~~l~DpdvqrgL~~l 32 (42)
T PF07849_consen 17 LRALRDPDVQRGLGFL 32 (42)
T ss_pred HHHHcCHHHHHHHHHH
Confidence 3568999999999863
No 228
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=24.38 E-value=41 Score=29.55 Aligned_cols=14 Identities=36% Similarity=0.854 Sum_probs=11.0
Q ss_pred CCEEEEECCCCchH
Q 012236 70 DPLLLWLTGGPGCS 83 (467)
Q Consensus 70 ~p~~lwlnGGPG~S 83 (467)
+|.||||.|=||+-
T Consensus 1 ~g~vIwltGlsGsG 14 (156)
T PF01583_consen 1 KGFVIWLTGLSGSG 14 (156)
T ss_dssp S-EEEEEESSTTSS
T ss_pred CCEEEEEECCCCCC
Confidence 48999999999863
No 229
>PF04414 tRNA_deacylase: D-aminoacyl-tRNA deacylase; InterPro: IPR007508 D-aminoacyl-tRNA deacylases hydrolyse the ester bond between the polynucleotide and the D-amino acid, thereby preventing the accumulation of such mis-acylated and metabolically inactive tRNA molecules. Several aminoacyl-tRNA synthetases have the ability to transfer the D-isomer of their amino acid onto their cognate tRNA. ; GO: 0016788 hydrolase activity, acting on ester bonds; PDB: 1YQE_A 2GFQ_B.
Probab=23.86 E-value=1.7e+02 Score=27.17 Aligned_cols=48 Identities=13% Similarity=-0.002 Sum_probs=33.9
Q ss_pred cCchHHHHHHHHHHHHHHHHCCCCC-CCCeEEEeccCCccchHHHHHHHHhh
Q 012236 144 TGDFKQVHQVDQFLRKWLMDHPEFL-SNPFYVGGDSYSGITVPPLVQQISNE 194 (467)
Q Consensus 144 ~~~~~~a~~~~~fL~~F~~~fp~~~-~~~~~i~GESYgG~yvP~lA~~i~~~ 194 (467)
.++..+++-+-+.+.+.+..-++-. ..++.-+| ||||.|.+...+++.
T Consensus 104 W~d~~a~~~vA~avl~~~~~~~~~~~~~~~ig~G---G~HYapr~t~~~l~~ 152 (213)
T PF04414_consen 104 WNDPDAAEAVARAVLEVLESDEKAECCPVAIGFG---GGHYAPRFTKLALET 152 (213)
T ss_dssp HT-HHHHHHHHHHHHHHHHHTTCSTT-EEEEEE----S-TT-HHHHHHHHHC
T ss_pred hCChHHHHHHHHHHHHHhcccccccccceeEEec---CcccchhhhhhhhcC
Confidence 5778888888899988887765432 25677778 999999999888874
No 230
>PRK13962 bifunctional phosphoglycerate kinase/triosephosphate isomerase; Provisional
Probab=23.66 E-value=1.5e+02 Score=32.43 Aligned_cols=61 Identities=18% Similarity=0.270 Sum_probs=45.4
Q ss_pred hHHHHHHHHHHHHHHHH-CCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEeEecCCccCcc
Q 012236 147 FKQVHQVDQFLRKWLMD-HPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGYILGNPKTDKI 218 (467)
Q Consensus 147 ~~~a~~~~~fL~~F~~~-fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~iGng~i~p~ 218 (467)
.+.|++++.|+++++.. |-.-....+=|- |||.--|.-+..|+... ++.|+.||..-+++.
T Consensus 574 ~e~aqevh~~IR~~l~~~~~~~~a~~~rIl---YGGSV~~~N~~~l~~~~--------diDG~LVGgASL~~~ 635 (645)
T PRK13962 574 PEQAQEVHAFIRKLVAELYGEEAARKVRIL---YGGSVKSENAAGLFNQP--------DIDGGLVGGASLKAQ 635 (645)
T ss_pred HHHHHHHHHHHHHHHHHHhChhhhccceEE---ecCCCCHhHHHHHhcCC--------CCCeEEeehHhcCHH
Confidence 46778899999998853 321111122222 99999999999998865 589999999998875
No 231
>KOG2682 consensus NAD-dependent histone deacetylases and class I sirtuins (SIR2 family) [Chromatin structure and dynamics; Transcription]
Probab=23.38 E-value=39 Score=31.58 Aligned_cols=64 Identities=17% Similarity=0.346 Sum_probs=39.9
Q ss_pred CceEEEecCCccccccccCCCCcccCchHHHHHHHHHHH-------------HHHHHCCCCCCCCeE-EEeccCCccchH
Q 012236 120 ASILFVDSPVGTGFSYVRTPLASQTGDFKQVHQVDQFLR-------------KWLMDHPEFLSNPFY-VGGDSYSGITVP 185 (467)
Q Consensus 120 an~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fL~-------------~F~~~fp~~~~~~~~-i~GESYgG~yvP 185 (467)
.-+++. ||.|-|.+..-.++...... +|.-|| .||++.| +||| ++-|=|-|.|-|
T Consensus 37 ~rVi~m---VGAGISTsaGIPDFRSP~tG----lY~NLqr~~LPYpEAiFel~yF~~nP----~PF~tLAkELyPgnfkP 105 (314)
T KOG2682|consen 37 RRVIVM---VGAGISTSAGIPDFRSPGTG----LYDNLQRYHLPYPEAIFELSYFKKNP----EPFFTLAKELYPGNFKP 105 (314)
T ss_pred ceEEEE---ecCccccccCCCCCCCCCch----hhhhHHHhcCCChhhhhccHHhhcCC----chHHHHHHHhCCCCcCc
Confidence 344543 69999976544444221111 333333 4555555 3655 788999999999
Q ss_pred HHHHHHHhh
Q 012236 186 PLVQQISNE 194 (467)
Q Consensus 186 ~lA~~i~~~ 194 (467)
.+.+++++-
T Consensus 106 t~~HYflrL 114 (314)
T KOG2682|consen 106 TITHYFLRL 114 (314)
T ss_pred hhHHHHHHH
Confidence 999988773
No 232
>PF05049 IIGP: Interferon-inducible GTPase (IIGP); InterPro: IPR007743 Interferon-inducible GTPase (IIGP) is thought to play a role in in intracellular defence. IIGP is predominantly associated with the Golgi apparatus and also localizes to the endoplasmic reticulum and exerts a distinct role in IFN-induced intracellular membrane trafficking or processing [].; GO: 0005525 GTP binding, 0016817 hydrolase activity, acting on acid anhydrides, 0016020 membrane; PDB: 1TPZ_A 1TQD_A 1TQ6_A 1TQ2_B 1TQ4_A.
Probab=22.78 E-value=30 Score=35.04 Aligned_cols=63 Identities=27% Similarity=0.414 Sum_probs=34.6
Q ss_pred CCCCEEEEECCCCc--hHHHhHHHHhhCceEEeccCCCCC-CCcceeCCCCcccCCceEEEecCCccc
Q 012236 68 KEDPLLLWLTGGPG--CSAFSALVYEIGPINFNILEYNGS-LPTLHLNPYSWTKEASILFVDSPVGTG 132 (467)
Q Consensus 68 ~~~p~~lwlnGGPG--~Ss~~g~~~E~GP~~~~~~~~~~~-~~~~~~n~~sW~~~an~l~iDqPvG~G 132 (467)
++.|+=|=+.|-+| -||++-.+-.+|+=.-.... .|. ..+.++.+|.=-++-|+.+.|-| |+|
T Consensus 32 ~~~~l~IaV~G~sGsGKSSfINalrGl~~~d~~aA~-tGv~etT~~~~~Y~~p~~pnv~lWDlP-G~g 97 (376)
T PF05049_consen 32 DNAPLNIAVTGESGSGKSSFINALRGLGHEDEGAAP-TGVVETTMEPTPYPHPKFPNVTLWDLP-GIG 97 (376)
T ss_dssp HH--EEEEEEESTTSSHHHHHHHHTT--TTSTTS---SSSHSCCTS-EEEE-SS-TTEEEEEE---GG
T ss_pred hcCceEEEEECCCCCCHHHHHHHHhCCCCCCcCcCC-CCCCcCCCCCeeCCCCCCCCCeEEeCC-CCC
Confidence 34677788888775 59998777777662111000 111 12466777777888999999999 777
No 233
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=21.96 E-value=1.2e+02 Score=33.72 Aligned_cols=94 Identities=21% Similarity=0.347 Sum_probs=55.1
Q ss_pred EEEECCCCchH-------HHhHHHHhhCceEEeccCCCCCCCcceeCCCCcccCCceEEEecCCccccccccCCCCcccC
Q 012236 73 LLWLTGGPGCS-------AFSALVYEIGPINFNILEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGFSYVRTPLASQTG 145 (467)
Q Consensus 73 ~lwlnGGPG~S-------s~~g~~~E~GP~~~~~~~~~~~~~~~~~n~~sW~~~an~l~iDqPvG~GfS~~~~~~~~~~~ 145 (467)
||++-|--|+- |...+-.-.||++=.. -..||++. +-.-||= .=-||--. -.+
T Consensus 92 VLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~---------~~d~~~~~----DFFaVDF--nEe~tAm~-----G~~ 151 (973)
T KOG3724|consen 92 VLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTE---------DRDNPFSF----DFFAVDF--NEEFTAMH-----GHI 151 (973)
T ss_pred EEEecCCCCchHHHHHHHHHHhhhhcCCchhhhh---------cccCcccc----ceEEEcc--cchhhhhc-----cHh
Confidence 57787777753 3345566789987332 23466665 3333331 11111110 135
Q ss_pred chHHHHHHHHHHHHHHH---HCCCCC---CCCeEEEeccCCccchHH
Q 012236 146 DFKQVHQVDQFLRKWLM---DHPEFL---SNPFYVGGDSYSGITVPP 186 (467)
Q Consensus 146 ~~~~a~~~~~fL~~F~~---~fp~~~---~~~~~i~GESYgG~yvP~ 186 (467)
..+.++.+.++++.-.. .-+|++ ...+.|.|+|+||.-+-.
T Consensus 152 l~dQtEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra 198 (973)
T KOG3724|consen 152 LLDQTEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARA 198 (973)
T ss_pred HHHHHHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHH
Confidence 56778888777765544 446676 556999999999975533
No 234
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=21.78 E-value=1e+02 Score=27.82 Aligned_cols=29 Identities=21% Similarity=0.430 Sum_probs=18.7
Q ss_pred CCCCEEEEECCCCch--HHHhH----HHHhhCceE
Q 012236 68 KEDPLLLWLTGGPGC--SAFSA----LVYEIGPIN 96 (467)
Q Consensus 68 ~~~p~~lwlnGGPG~--Ss~~g----~~~E~GP~~ 96 (467)
.+.|.||||.|=+|+ |.+.. .+.+.|=-.
T Consensus 20 ~~~~~viW~TGLSGsGKSTiA~ale~~L~~~G~~~ 54 (197)
T COG0529 20 GQKGAVIWFTGLSGSGKSTIANALEEKLFAKGYHV 54 (197)
T ss_pred CCCCeEEEeecCCCCCHHHHHHHHHHHHHHcCCeE
Confidence 467999999996654 55443 344566543
No 235
>PRK14565 triosephosphate isomerase; Provisional
Probab=21.63 E-value=1.8e+02 Score=27.46 Aligned_cols=53 Identities=15% Similarity=0.249 Sum_probs=41.1
Q ss_pred hHHHHHHHHHHHHHHHHCCCCCCCCeEEEeccCCccchHHHHHHHHhhcccCCCCceeeeEeEecCCccCcc
Q 012236 147 FKQVHQVDQFLRKWLMDHPEFLSNPFYVGGDSYSGITVPPLVQQISNENEEGIKPLINLQGYILGNPKTDKI 218 (467)
Q Consensus 147 ~~~a~~~~~fL~~F~~~fp~~~~~~~~i~GESYgG~yvP~lA~~i~~~n~~~~~~~inLkGi~iGng~i~p~ 218 (467)
.+.+++..++++++. ...-|. |||.--|.-+..+.+.. ++.|++||.+.+++.
T Consensus 173 ~e~i~~~~~~Ir~~~--------~~~~Il---YGGSV~~~N~~~l~~~~--------~iDG~LvG~asl~~~ 225 (237)
T PRK14565 173 NDAIAEAFEIIRSYD--------SKSHII---YGGSVNQENIRDLKSIN--------QLSGVLVGSASLDVD 225 (237)
T ss_pred HHHHHHHHHHHHHhC--------CCceEE---EcCccCHhhHHHHhcCC--------CCCEEEEechhhcHH
Confidence 456788889998862 122222 99999999999998843 589999999999875
No 236
>PF14020 DUF4236: Protein of unknown function (DUF4236)
Probab=21.20 E-value=1.1e+02 Score=21.77 Aligned_cols=15 Identities=47% Similarity=0.643 Sum_probs=11.9
Q ss_pred ceEEEecCCccccccc
Q 012236 121 SILFVDSPVGTGFSYV 136 (467)
Q Consensus 121 n~l~iDqPvG~GfS~~ 136 (467)
-.+-++-| |+|+||.
T Consensus 40 ~~~t~~iP-GtGlsyr 54 (55)
T PF14020_consen 40 RRTTVGIP-GTGLSYR 54 (55)
T ss_pred cEEEEEcC-CCccEEe
Confidence 44778888 9999984
No 237
>PF10929 DUF2811: Protein of unknown function (DUF2811); InterPro: IPR021231 This is a bacterial family of uncharacterised proteins.
Probab=21.18 E-value=79 Score=22.59 Aligned_cols=22 Identities=14% Similarity=0.397 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHHHHHCCCCCC
Q 012236 148 KQVHQVDQFLRKWLMDHPEFLS 169 (467)
Q Consensus 148 ~~a~~~~~fL~~F~~~fp~~~~ 169 (467)
++-+++++.|++|++.+|.+-.
T Consensus 5 eiPe~L~~~m~~fie~hP~WDQ 26 (57)
T PF10929_consen 5 EIPEDLHQAMKDFIETHPNWDQ 26 (57)
T ss_pred cccHHHHHHHHHHHHcCCCchH
Confidence 4567899999999999998865
No 238
>PF10609 ParA: ParA/MinD ATPase like; InterPro: IPR019591 This entry represents ATPases involved in plasmid partitioning []. It also contains cytosolic Fe-S cluster assembling factors, NBP35 and CFD1 which are required for biogenesis and export of both ribosomal subunits probably through assembling the ISCs in RLI1, a protein which performs rRNA processing and ribosome export [, , ].; PDB: 2PH1_A 3KB1_B.
Probab=21.04 E-value=60 Score=25.07 Aligned_cols=12 Identities=50% Similarity=0.888 Sum_probs=8.3
Q ss_pred ceEEEecCCccc
Q 012236 121 SILFVDSPVGTG 132 (467)
Q Consensus 121 n~l~iDqPvG~G 132 (467)
+.|.||-|.|||
T Consensus 2 D~LiiD~PPGTg 13 (81)
T PF10609_consen 2 DYLIIDLPPGTG 13 (81)
T ss_dssp CEEEEE--SCSS
T ss_pred CEEEEeCCCCCC
Confidence 468899999998
No 239
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=20.84 E-value=96 Score=33.42 Aligned_cols=40 Identities=10% Similarity=-0.119 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHCCCCC-CCCeEEEeccCCccchHHHHHH
Q 012236 151 HQVDQFLRKWLMDHPEFL-SNPFYVGGDSYSGITVPPLVQQ 190 (467)
Q Consensus 151 ~~~~~fL~~F~~~fp~~~-~~~~~i~GESYgG~yvP~lA~~ 190 (467)
++.+.-|++.++..=+.. ++++.|.|||+||.++-+|-..
T Consensus 193 d~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~w 233 (642)
T PLN02517 193 DQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMKW 233 (642)
T ss_pred hHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHHh
Confidence 444455666555432233 5799999999999888877654
No 240
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=20.58 E-value=85 Score=29.26 Aligned_cols=26 Identities=19% Similarity=0.473 Sum_probs=21.2
Q ss_pred CCeEEEEcCCCccccCchhHHHHHHh
Q 012236 380 GYRSLIYSGDHDMVVPFLGTEAWIKS 405 (467)
Q Consensus 380 ~irVLiY~Gd~D~i~n~~Gt~~wi~~ 405 (467)
+++++|++|+.|..|+....++.++.
T Consensus 169 ~~P~~v~hG~~D~tV~~~n~~~~~~q 194 (220)
T PF10503_consen 169 GYPRIVFHGTADTTVNPQNADQLVAQ 194 (220)
T ss_pred CCCEEEEecCCCCccCcchHHHHHHH
Confidence 56899999999999998876665544
No 241
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=20.40 E-value=80 Score=26.68 Aligned_cols=17 Identities=29% Similarity=0.479 Sum_probs=14.4
Q ss_pred CCCCCEEEEECCCCchH
Q 012236 67 PKEDPLLLWLTGGPGCS 83 (467)
Q Consensus 67 ~~~~p~~lwlnGGPG~S 83 (467)
..++||||=|+|.||+.
T Consensus 49 ~p~KpLVlSfHG~tGtG 65 (127)
T PF06309_consen 49 NPRKPLVLSFHGWTGTG 65 (127)
T ss_pred CCCCCEEEEeecCCCCc
Confidence 45679999999999974
Done!