Query 012237
Match_columns 467
No_of_seqs 189 out of 1337
Neff 8.6
Searched_HMMs 46136
Date Fri Mar 29 00:30:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012237.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012237hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1282 Serine carboxypeptidas 100.0 3E-104 6E-109 795.3 34.0 402 31-461 39-452 (454)
2 PF00450 Peptidase_S10: Serine 100.0 1.5E-97 3E-102 765.1 24.1 392 31-456 6-415 (415)
3 PTZ00472 serine carboxypeptida 100.0 1.1E-94 2.5E-99 743.8 36.8 393 27-459 38-461 (462)
4 PLN03016 sinapoylglucose-malat 100.0 2.8E-94 6.2E-99 731.8 33.3 384 32-458 33-432 (433)
5 PLN02209 serine carboxypeptida 100.0 4.9E-92 1.1E-96 715.3 37.0 383 32-458 35-436 (437)
6 KOG1283 Serine carboxypeptidas 100.0 1.7E-84 3.7E-89 601.3 18.5 411 35-455 2-412 (414)
7 PLN02213 sinapoylglucose-malat 100.0 4.6E-71 1E-75 545.6 25.1 314 107-458 1-318 (319)
8 COG2939 Carboxypeptidase C (ca 100.0 1.1E-68 2.3E-73 531.2 21.4 388 35-456 75-490 (498)
9 TIGR03611 RutD pyrimidine util 99.3 5.4E-11 1.2E-15 112.8 17.2 104 67-203 13-116 (257)
10 TIGR01250 pro_imino_pep_2 prol 99.3 3.5E-10 7.5E-15 108.9 19.9 128 37-203 3-132 (288)
11 PLN02824 hydrolase, alpha/beta 99.2 2.8E-09 6.2E-14 104.4 21.3 124 38-202 10-137 (294)
12 PHA02857 monoglyceride lipase; 99.1 7.1E-09 1.5E-13 100.4 18.5 126 43-203 7-133 (276)
13 PRK10673 acyl-CoA esterase; Pr 99.1 2.2E-09 4.7E-14 102.5 14.2 98 67-199 16-113 (255)
14 TIGR03056 bchO_mg_che_rel puta 99.1 7.5E-09 1.6E-13 99.7 17.3 105 67-204 28-132 (278)
15 PRK03204 haloalkane dehalogena 99.1 9.9E-09 2.2E-13 100.3 18.2 123 36-202 14-136 (286)
16 PRK00870 haloalkane dehalogena 99.0 2.2E-08 4.9E-13 98.5 20.2 132 29-200 12-148 (302)
17 PRK06489 hypothetical protein; 99.0 1.1E-07 2.4E-12 96.2 24.7 112 67-200 69-187 (360)
18 PLN02298 hydrolase, alpha/beta 99.0 9.9E-08 2.1E-12 95.1 23.4 135 37-203 33-170 (330)
19 TIGR03343 biphenyl_bphD 2-hydr 98.9 2.8E-07 6E-12 89.3 23.0 61 364-456 222-282 (282)
20 PLN02679 hydrolase, alpha/beta 98.9 1E-07 2.2E-12 96.3 19.9 102 68-201 89-190 (360)
21 PLN02385 hydrolase; alpha/beta 98.9 1.5E-07 3.3E-12 94.7 20.9 128 44-202 69-197 (349)
22 PRK10349 carboxylesterase BioH 98.9 2.4E-08 5.1E-13 95.7 14.3 94 68-200 14-107 (256)
23 PLN02578 hydrolase 98.9 2.5E-07 5.5E-12 93.3 22.2 100 68-201 87-186 (354)
24 PLN02894 hydrolase, alpha/beta 98.9 2.2E-07 4.8E-12 95.3 22.0 149 17-201 60-210 (402)
25 TIGR02240 PHA_depoly_arom poly 98.9 3.1E-08 6.7E-13 96.1 15.1 121 41-203 7-127 (276)
26 TIGR02427 protocat_pcaD 3-oxoa 98.9 7.9E-08 1.7E-12 90.1 16.4 99 67-199 13-111 (251)
27 PF12697 Abhydrolase_6: Alpha/ 98.9 5.8E-08 1.2E-12 89.4 15.0 103 70-204 1-103 (228)
28 PRK03592 haloalkane dehalogena 98.9 1.4E-08 2.9E-13 99.6 10.9 103 68-204 28-130 (295)
29 KOG4409 Predicted hydrolase/ac 98.9 1.6E-07 3.5E-12 90.9 17.9 135 34-204 63-197 (365)
30 PLN03084 alpha/beta hydrolase 98.9 2.8E-07 6.1E-12 93.5 20.4 105 67-202 127-232 (383)
31 PRK10749 lysophospholipase L2; 98.8 3.3E-07 7.1E-12 91.5 19.6 131 39-203 33-167 (330)
32 PLN02652 hydrolase; alpha/beta 98.8 8.8E-07 1.9E-11 90.4 22.1 127 45-203 119-246 (395)
33 TIGR01738 bioH putative pimelo 98.8 1.4E-07 2.9E-12 88.3 15.0 60 363-454 186-245 (245)
34 PRK11126 2-succinyl-6-hydroxy- 98.8 3.4E-07 7.5E-12 86.6 17.2 100 67-201 2-101 (242)
35 PLN03087 BODYGUARD 1 domain co 98.8 1.7E-06 3.7E-11 89.9 22.7 134 34-200 174-307 (481)
36 TIGR03695 menH_SHCHC 2-succiny 98.7 2.2E-07 4.7E-12 86.9 14.8 103 68-201 2-104 (251)
37 KOG4178 Soluble epoxide hydrol 98.6 2E-06 4.4E-11 83.0 17.3 134 36-206 22-157 (322)
38 PLN02980 2-oxoglutarate decarb 98.6 1.9E-06 4.2E-11 102.3 20.3 103 67-200 1371-1478(1655)
39 PRK07581 hypothetical protein; 98.6 6.8E-06 1.5E-10 82.3 21.3 59 365-455 275-334 (339)
40 PLN02965 Probable pheophorbida 98.5 2.5E-06 5.4E-11 81.7 15.6 99 70-201 6-106 (255)
41 PRK08775 homoserine O-acetyltr 98.5 8.6E-06 1.9E-10 81.8 18.0 62 365-457 277-339 (343)
42 PRK14875 acetoin dehydrogenase 98.5 5.1E-06 1.1E-10 83.9 16.5 101 67-201 131-231 (371)
43 COG1506 DAP2 Dipeptidyl aminop 98.4 2.4E-06 5.2E-11 92.4 13.8 115 45-176 374-491 (620)
44 TIGR01607 PST-A Plasmodium sub 98.4 6.4E-05 1.4E-09 75.1 21.9 144 46-203 7-186 (332)
45 KOG1454 Predicted hydrolase/ac 98.4 7.9E-06 1.7E-10 81.2 14.8 61 365-457 264-324 (326)
46 TIGR01249 pro_imino_pep_1 prol 98.4 1.9E-06 4E-11 85.1 10.0 125 38-203 6-131 (306)
47 PRK00175 metX homoserine O-ace 98.3 7E-05 1.5E-09 76.3 20.7 66 365-458 309-375 (379)
48 PLN02511 hydrolase 98.3 4.2E-05 9.2E-10 78.1 17.4 118 38-176 73-191 (388)
49 PRK05855 short chain dehydroge 98.1 0.00014 3.1E-09 77.9 18.0 100 46-175 12-111 (582)
50 PF00561 Abhydrolase_1: alpha/ 97.9 3.3E-05 7.2E-10 71.7 8.2 57 363-451 173-229 (230)
51 PF10340 DUF2424: Protein of u 97.9 4E-05 8.7E-10 76.3 9.1 134 48-205 105-238 (374)
52 TIGR01392 homoserO_Ac_trn homo 97.9 0.0029 6.3E-08 63.7 22.5 63 365-455 288-351 (351)
53 COG2267 PldB Lysophospholipase 97.8 0.00074 1.6E-08 66.3 16.5 134 36-204 9-144 (298)
54 PLN02872 triacylglycerol lipas 97.7 0.00074 1.6E-08 68.9 14.9 63 365-457 325-389 (395)
55 PRK10985 putative hydrolase; P 97.6 0.0097 2.1E-07 59.2 21.2 118 35-176 30-149 (324)
56 TIGR03101 hydr2_PEP hydrolase, 97.6 0.00038 8.2E-09 67.1 9.4 133 40-205 4-137 (266)
57 PRK06765 homoserine O-acetyltr 97.5 0.0048 1E-07 62.9 17.2 66 363-456 321-387 (389)
58 PLN02211 methyl indole-3-aceta 97.5 0.00033 7.1E-09 68.0 8.3 105 65-201 16-121 (273)
59 PF00326 Peptidase_S9: Prolyl 97.4 0.0011 2.3E-08 61.6 10.5 91 106-206 13-103 (213)
60 TIGR01840 esterase_phb esteras 97.4 0.00068 1.5E-08 63.1 8.2 28 367-394 170-197 (212)
61 PRK05077 frsA fermentation/res 97.3 0.001 2.2E-08 68.5 8.8 80 107-203 222-301 (414)
62 KOG2564 Predicted acetyltransf 97.0 0.0027 5.8E-08 60.1 7.8 106 64-197 71-177 (343)
63 KOG1455 Lysophospholipase [Lip 96.9 0.0072 1.6E-07 58.0 9.6 118 39-177 30-148 (313)
64 COG0596 MhpC Predicted hydrola 96.8 0.0037 8E-08 57.8 7.8 104 67-203 21-124 (282)
65 COG3509 LpqC Poly(3-hydroxybut 96.8 0.014 3.1E-07 55.8 11.2 162 4-202 7-179 (312)
66 KOG2382 Predicted alpha/beta h 96.8 0.028 6E-07 54.7 13.4 53 109-169 82-134 (315)
67 PRK10566 esterase; Provisional 96.8 0.0064 1.4E-07 57.6 9.0 95 67-177 27-126 (249)
68 TIGR02821 fghA_ester_D S-formy 96.7 0.012 2.6E-07 57.1 10.4 41 155-204 135-175 (275)
69 cd00707 Pancreat_lipase_like P 96.7 0.0023 4.9E-08 62.2 5.0 107 67-200 36-145 (275)
70 PLN02442 S-formylglutathione h 96.7 0.01 2.2E-07 57.9 9.5 56 137-204 125-180 (283)
71 TIGR03100 hydr1_PEP hydrolase, 96.5 0.0069 1.5E-07 58.7 7.4 108 68-203 27-135 (274)
72 KOG1515 Arylacetamide deacetyl 96.5 0.022 4.8E-07 56.6 10.7 142 40-203 65-208 (336)
73 TIGR03230 lipo_lipase lipoprot 96.3 0.014 3.1E-07 60.0 8.4 80 107-200 73-152 (442)
74 PRK13604 luxD acyl transferase 96.3 0.31 6.8E-06 47.7 17.2 129 41-203 14-142 (307)
75 TIGR00976 /NonD putative hydro 95.9 0.031 6.8E-07 59.8 9.0 132 43-205 3-135 (550)
76 PF00975 Thioesterase: Thioest 95.8 0.031 6.7E-07 52.2 7.5 101 69-201 2-103 (229)
77 PRK05371 x-prolyl-dipeptidyl a 95.6 0.21 4.6E-06 55.5 14.4 85 106-205 278-376 (767)
78 PF06500 DUF1100: Alpha/beta h 95.6 0.015 3.3E-07 58.8 4.7 81 106-203 217-297 (411)
79 PF08386 Abhydrolase_4: TAP-li 95.5 0.05 1.1E-06 44.4 6.8 64 366-461 35-98 (103)
80 PF10230 DUF2305: Uncharacteri 95.3 0.074 1.6E-06 51.4 8.3 116 67-202 2-122 (266)
81 KOG2100 Dipeptidyl aminopeptid 95.1 0.059 1.3E-06 59.6 7.8 146 36-204 498-646 (755)
82 KOG4391 Predicted alpha/beta h 95.0 0.099 2.1E-06 47.9 7.6 109 67-204 78-186 (300)
83 PLN00021 chlorophyllase 95.0 0.078 1.7E-06 52.4 7.6 111 67-203 52-167 (313)
84 TIGR01838 PHA_synth_I poly(R)- 94.8 1.1 2.3E-05 47.7 16.0 85 107-204 220-304 (532)
85 PRK10162 acetyl esterase; Prov 94.8 0.085 1.8E-06 52.3 7.4 44 157-203 153-196 (318)
86 PF12695 Abhydrolase_5: Alpha/ 94.6 0.072 1.6E-06 45.5 5.6 94 69-202 1-95 (145)
87 PRK11071 esterase YqiA; Provis 94.5 0.063 1.4E-06 49.0 5.3 54 365-455 136-189 (190)
88 PRK10115 protease 2; Provision 94.5 0.091 2E-06 57.8 7.3 137 45-207 425-564 (686)
89 PF10503 Esterase_phd: Esteras 93.9 0.22 4.8E-06 46.5 7.6 40 154-202 93-132 (220)
90 cd00312 Esterase_lipase Estera 93.3 0.27 5.8E-06 51.8 8.0 34 142-176 161-194 (493)
91 PF07519 Tannase: Tannase and 92.4 1.3 2.7E-05 46.6 11.3 88 355-461 343-431 (474)
92 COG0400 Predicted esterase [Ge 92.3 1.6 3.5E-05 40.4 10.6 98 116-223 58-158 (207)
93 PRK11460 putative hydrolase; P 92.2 0.53 1.2E-05 44.3 7.6 37 140-177 86-122 (232)
94 COG4099 Predicted peptidase [G 92.1 2.1 4.5E-05 41.4 11.1 113 46-180 171-291 (387)
95 PF02230 Abhydrolase_2: Phosph 92.1 0.1 2.2E-06 48.5 2.6 59 365-455 155-213 (216)
96 PLN02454 triacylglycerol lipas 91.1 0.62 1.3E-05 47.4 7.0 70 133-204 204-273 (414)
97 TIGR03502 lipase_Pla1_cef extr 90.8 0.85 1.8E-05 50.4 8.2 100 63-177 445-574 (792)
98 KOG1838 Alpha/beta hydrolase [ 90.1 1.6 3.4E-05 44.3 8.8 135 39-202 96-236 (409)
99 PRK11460 putative hydrolase; P 89.5 0.69 1.5E-05 43.6 5.5 62 365-454 148-209 (232)
100 PLN02211 methyl indole-3-aceta 88.3 1.2 2.6E-05 43.0 6.5 59 365-456 211-269 (273)
101 PRK10566 esterase; Provisional 86.6 1.2 2.5E-05 42.0 5.2 62 365-456 186-247 (249)
102 PF06057 VirJ: Bacterial virul 86.5 1.8 3.8E-05 39.3 5.9 58 132-197 45-102 (192)
103 COG0596 MhpC Predicted hydrola 86.1 2.2 4.7E-05 38.9 6.7 64 361-455 217-280 (282)
104 TIGR03100 hydr1_PEP hydrolase, 86.0 1.5 3.2E-05 42.4 5.6 71 360-455 202-273 (274)
105 TIGR01249 pro_imino_pep_1 prol 86.0 2.1 4.6E-05 41.9 6.9 28 365-392 248-275 (306)
106 PLN02571 triacylglycerol lipas 85.9 2.3 4.9E-05 43.4 7.0 70 134-204 203-277 (413)
107 PF12695 Abhydrolase_5: Alpha/ 85.9 1.8 3.8E-05 36.7 5.5 33 360-392 99-131 (145)
108 PF05728 UPF0227: Uncharacteri 84.7 1.9 4E-05 39.3 5.3 41 154-206 55-95 (187)
109 PF01764 Lipase_3: Lipase (cla 84.6 1.7 3.7E-05 36.9 4.8 63 136-203 45-107 (140)
110 PF03283 PAE: Pectinacetyleste 83.6 4.7 0.0001 40.7 8.1 127 68-203 51-198 (361)
111 cd00519 Lipase_3 Lipase (class 83.3 2.7 5.9E-05 39.2 6.0 63 134-203 107-169 (229)
112 PF11144 DUF2920: Protein of u 83.2 2.5 5.4E-05 42.8 5.9 62 135-205 160-222 (403)
113 KOG2281 Dipeptidyl aminopeptid 83.0 3.8 8.3E-05 43.6 7.2 129 47-207 623-767 (867)
114 PF02230 Abhydrolase_2: Phosph 82.7 2.2 4.7E-05 39.5 5.0 56 136-202 85-140 (216)
115 cd00741 Lipase Lipase. Lipase 82.6 2.5 5.4E-05 36.7 5.1 44 135-181 8-51 (153)
116 KOG3975 Uncharacterized conser 82.6 2.5 5.5E-05 39.8 5.2 110 65-197 27-142 (301)
117 PF11288 DUF3089: Protein of u 82.5 1.9 4.1E-05 39.8 4.4 40 135-176 74-113 (207)
118 PF03583 LIP: Secretory lipase 82.2 3.8 8.3E-05 40.0 6.7 69 365-461 219-289 (290)
119 PF05677 DUF818: Chlamydia CHL 81.7 4 8.6E-05 40.4 6.4 59 106-172 170-229 (365)
120 COG0400 Predicted esterase [Ge 81.4 3.9 8.4E-05 37.8 6.0 60 364-456 145-204 (207)
121 PF02129 Peptidase_S15: X-Pro 80.8 1.6 3.4E-05 42.1 3.5 85 106-206 56-140 (272)
122 PRK05077 frsA fermentation/res 80.2 3.9 8.5E-05 42.1 6.3 58 365-457 355-412 (414)
123 COG2272 PnbA Carboxylesterase 79.5 4.6 9.9E-05 41.9 6.3 33 142-175 165-197 (491)
124 PRK10439 enterobactin/ferric e 79.3 3.8 8.3E-05 42.1 5.9 35 158-201 288-322 (411)
125 PRK10252 entF enterobactin syn 78.9 5.7 0.00012 47.1 8.0 101 68-200 1069-1169(1296)
126 KOG2183 Prolylcarboxypeptidase 78.3 3.3 7.1E-05 41.9 4.7 67 107-175 111-184 (492)
127 TIGR01836 PHA_synth_III_C poly 78.2 4.7 0.0001 40.4 6.1 62 364-456 285-349 (350)
128 PF07859 Abhydrolase_3: alpha/ 77.7 2.5 5.4E-05 38.6 3.6 65 135-204 46-112 (211)
129 COG0657 Aes Esterase/lipase [L 77.5 10 0.00022 37.2 8.2 44 157-205 151-194 (312)
130 KOG4627 Kynurenine formamidase 76.9 3.1 6.6E-05 38.1 3.7 72 118-203 102-173 (270)
131 PF00151 Lipase: Lipase; Inte 76.8 1.4 3E-05 44.0 1.7 71 106-181 103-173 (331)
132 PF05577 Peptidase_S28: Serine 76.0 5.9 0.00013 41.0 6.3 91 107-207 59-153 (434)
133 PRK04940 hypothetical protein; 75.8 7.4 0.00016 35.1 5.9 37 158-206 60-96 (180)
134 PLN02324 triacylglycerol lipas 75.6 8.5 0.00018 39.3 6.9 71 133-204 191-267 (415)
135 PLN02753 triacylglycerol lipas 75.5 8 0.00017 40.6 6.8 73 133-205 285-362 (531)
136 PLN02719 triacylglycerol lipas 74.8 8.3 0.00018 40.3 6.7 73 133-205 271-348 (518)
137 KOG1552 Predicted alpha/beta h 73.1 5.2 0.00011 37.9 4.4 61 366-458 193-253 (258)
138 PLN02761 lipase class 3 family 72.9 10 0.00022 39.9 6.8 73 133-205 266-345 (527)
139 PF05990 DUF900: Alpha/beta hy 71.2 8.2 0.00018 36.4 5.4 68 134-204 72-139 (233)
140 COG3319 Thioesterase domains o 70.6 38 0.00082 32.5 9.7 87 68-180 1-87 (257)
141 smart00824 PKS_TE Thioesterase 70.3 13 0.00029 33.1 6.5 76 106-199 24-99 (212)
142 TIGR01836 PHA_synth_III_C poly 68.8 8.7 0.00019 38.4 5.3 78 107-203 94-172 (350)
143 PLN02934 triacylglycerol lipas 68.4 13 0.00028 39.0 6.4 39 139-180 305-343 (515)
144 PF08840 BAAT_C: BAAT / Acyl-C 68.2 8.3 0.00018 35.7 4.7 45 147-201 11-55 (213)
145 PF08237 PE-PPE: PE-PPE domain 67.3 17 0.00037 34.0 6.6 86 109-202 4-90 (225)
146 PF10081 Abhydrolase_9: Alpha/ 67.0 11 0.00023 36.4 5.1 36 134-169 85-120 (289)
147 PF12146 Hydrolase_4: Putative 66.9 14 0.00031 28.3 5.0 77 48-146 3-79 (79)
148 PF06342 DUF1057: Alpha/beta h 66.7 45 0.00098 32.3 9.2 93 354-454 201-296 (297)
149 KOG3724 Negative regulator of 66.4 58 0.0013 36.0 10.8 157 5-174 19-198 (973)
150 PRK11071 esterase YqiA; Provis 65.5 15 0.00032 33.3 5.7 76 68-178 2-81 (190)
151 PLN02733 phosphatidylcholine-s 65.2 12 0.00025 38.9 5.5 42 134-178 141-182 (440)
152 KOG1552 Predicted alpha/beta h 64.3 17 0.00038 34.5 5.9 106 67-205 60-166 (258)
153 COG0627 Predicted esterase [Ge 63.6 16 0.00035 36.2 5.8 125 65-205 52-190 (316)
154 PLN02408 phospholipase A1 63.5 20 0.00042 36.2 6.5 65 135-203 178-242 (365)
155 PRK14567 triosephosphate isome 61.9 13 0.00028 35.5 4.7 62 135-206 178-239 (253)
156 PF11187 DUF2974: Protein of u 61.6 20 0.00043 33.6 5.8 49 143-200 73-121 (224)
157 PLN02310 triacylglycerol lipas 61.5 23 0.00049 36.2 6.6 66 135-204 185-251 (405)
158 PLN00413 triacylglycerol lipas 61.0 15 0.00033 38.1 5.3 38 140-180 269-306 (479)
159 PRK14566 triosephosphate isome 59.4 14 0.0003 35.4 4.4 62 135-206 188-249 (260)
160 KOG3079 Uridylate kinase/adeny 58.3 6.1 0.00013 35.6 1.7 14 67-80 7-20 (195)
161 KOG1553 Predicted alpha/beta h 58.0 87 0.0019 31.3 9.5 96 67-197 243-340 (517)
162 PLN02802 triacylglycerol lipas 57.7 25 0.00055 36.8 6.3 65 136-204 309-373 (509)
163 PF05057 DUF676: Putative seri 56.5 21 0.00045 33.1 5.1 48 133-181 54-101 (217)
164 PLN02162 triacylglycerol lipas 54.9 27 0.00059 36.3 5.9 39 139-180 262-300 (475)
165 COG1647 Esterase/lipase [Gener 54.8 17 0.00036 33.9 4.0 61 365-455 181-242 (243)
166 COG3208 GrsT Predicted thioest 54.4 33 0.00071 32.4 5.9 63 107-179 33-95 (244)
167 KOG4569 Predicted lipase [Lipi 53.1 24 0.00052 35.3 5.2 60 139-203 155-214 (336)
168 COG0429 Predicted hydrolase of 52.7 30 0.00065 34.2 5.5 105 67-200 75-184 (345)
169 PF05436 MF_alpha_N: Mating fa 51.9 21 0.00045 27.8 3.5 45 3-47 2-48 (86)
170 PLN03037 lipase class 3 family 48.9 42 0.0009 35.4 6.2 46 136-181 295-341 (525)
171 PLN02429 triosephosphate isome 48.8 26 0.00057 34.5 4.6 61 136-206 239-300 (315)
172 COG2945 Predicted hydrolase of 48.1 21 0.00046 32.5 3.4 54 118-178 70-123 (210)
173 PRK07868 acyl-CoA synthetase; 47.4 31 0.00067 39.9 5.6 62 365-457 297-361 (994)
174 PLN02847 triacylglycerol lipas 45.2 29 0.00064 37.1 4.5 62 137-205 233-295 (633)
175 PF08840 BAAT_C: BAAT / Acyl-C 44.9 17 0.00037 33.6 2.5 54 365-443 115-169 (213)
176 PF06821 Ser_hydrolase: Serine 44.4 37 0.0008 30.2 4.5 27 366-392 115-141 (171)
177 COG4757 Predicted alpha/beta h 44.2 41 0.00089 31.7 4.7 67 106-176 56-123 (281)
178 PF06259 Abhydrolase_8: Alpha/ 44.0 32 0.00069 31.0 4.0 61 106-174 62-125 (177)
179 PLN02442 S-formylglutathione h 43.9 42 0.00091 32.4 5.2 49 363-439 215-264 (283)
180 PLN02561 triosephosphate isome 43.7 33 0.00072 32.8 4.3 59 136-204 180-239 (253)
181 KOG3043 Predicted hydrolase re 41.7 56 0.0012 30.6 5.2 35 358-392 157-191 (242)
182 KOG3411 40S ribosomal protein 40.7 15 0.00032 30.9 1.2 81 85-183 40-134 (143)
183 PF08538 DUF1749: Protein of u 38.5 1.7E+02 0.0036 28.8 8.3 71 132-206 81-152 (303)
184 COG1073 Hydrolases of the alph 38.4 71 0.0015 30.0 5.9 61 366-456 233-296 (299)
185 PF07819 PGAP1: PGAP1-like pro 38.3 1.1E+02 0.0024 28.5 6.9 64 135-204 60-126 (225)
186 cd00311 TIM Triosephosphate is 36.8 58 0.0013 30.9 4.8 60 136-206 176-236 (242)
187 PF01083 Cutinase: Cutinase; 36.3 68 0.0015 28.7 5.0 81 109-203 41-124 (179)
188 PF05448 AXE1: Acetyl xylan es 36.0 1.2E+02 0.0026 30.0 7.1 55 137-202 155-209 (320)
189 PF06309 Torsin: Torsin; Inte 35.9 30 0.00066 29.2 2.4 16 66-81 51-66 (127)
190 PRK00042 tpiA triosephosphate 35.0 66 0.0014 30.7 4.8 60 136-206 180-240 (250)
191 PF09292 Neil1-DNA_bind: Endon 34.6 24 0.00052 22.7 1.2 11 68-78 25-35 (39)
192 PF07389 DUF1500: Protein of u 34.4 32 0.00069 26.7 2.0 28 139-168 7-34 (100)
193 COG3571 Predicted hydrolase of 34.2 29 0.00062 30.7 2.0 26 154-179 85-110 (213)
194 PRK10259 hypothetical protein; 34.1 41 0.00089 26.3 2.7 44 1-45 1-44 (86)
195 PTZ00333 triosephosphate isome 33.3 59 0.0013 31.1 4.2 61 134-204 181-242 (255)
196 PRK14565 triosephosphate isome 32.7 59 0.0013 30.7 4.1 55 134-206 172-226 (237)
197 PF14020 DUF4236: Protein of u 32.6 21 0.00046 25.3 0.8 14 110-124 41-54 (55)
198 PF08060 NOSIC: NOSIC (NUC001) 32.1 46 0.00099 23.3 2.5 23 134-156 12-35 (53)
199 PF01738 DLH: Dienelactone hyd 31.9 1.9E+02 0.0042 26.2 7.4 30 363-392 143-172 (218)
200 PRK06762 hypothetical protein; 31.3 28 0.00062 30.4 1.6 14 68-81 2-15 (166)
201 PF12740 Chlorophyllase2: Chlo 31.2 1.2E+02 0.0027 29.0 6.0 63 133-201 62-130 (259)
202 KOG2551 Phospholipase/carboxyh 31.1 1.2E+02 0.0027 28.2 5.7 58 365-455 163-222 (230)
203 PF01738 DLH: Dienelactone hyd 31.0 47 0.001 30.4 3.1 43 134-177 75-117 (218)
204 PF02450 LCAT: Lecithin:choles 31.0 74 0.0016 32.4 4.8 40 136-179 101-140 (389)
205 COG3150 Predicted esterase [Ge 30.0 93 0.002 27.8 4.5 59 131-208 39-97 (191)
206 PF15253 STIL_N: SCL-interrupt 28.8 71 0.0015 32.6 4.0 41 29-75 193-235 (410)
207 KOG3101 Esterase D [General fu 28.7 22 0.00048 32.8 0.4 45 157-210 140-184 (283)
208 PF03403 PAF-AH_p_II: Platelet 28.3 35 0.00076 34.7 1.9 39 158-206 228-266 (379)
209 PF01583 APS_kinase: Adenylyls 27.8 35 0.00077 30.0 1.6 14 67-80 1-14 (156)
210 PF00756 Esterase: Putative es 27.6 29 0.00063 32.4 1.1 57 136-205 97-153 (251)
211 PRK14750 kdpF potassium-transp 27.3 61 0.0013 19.6 1.9 23 4-26 6-28 (29)
212 PRK07868 acyl-CoA synthetase; 26.9 2.3E+02 0.0051 32.8 8.5 105 67-202 67-177 (994)
213 COG5153 CVT17 Putative lipase 26.8 44 0.00095 32.3 2.1 29 145-173 263-291 (425)
214 KOG4540 Putative lipase essent 26.8 44 0.00095 32.3 2.1 29 145-173 263-291 (425)
215 COG3673 Uncharacterized conser 26.4 81 0.0018 31.2 3.8 66 107-177 65-141 (423)
216 PF06028 DUF915: Alpha/beta hy 25.3 1.5E+02 0.0033 28.3 5.5 64 133-202 81-144 (255)
217 PF12532 DUF3732: Protein of u 25.0 1E+02 0.0022 28.2 4.1 44 108-151 101-151 (193)
218 PF00121 TIM: Triosephosphate 24.8 29 0.00062 33.0 0.5 63 135-207 177-240 (244)
219 COG3208 GrsT Predicted thioest 24.8 1.4E+02 0.003 28.3 5.0 60 365-456 176-235 (244)
220 PF10503 Esterase_phd: Esteras 24.5 73 0.0016 29.7 3.1 28 365-392 169-196 (220)
221 TIGR01653 lactococcin_972 bact 24.3 55 0.0012 26.0 1.9 24 1-26 1-24 (92)
222 KOG3253 Predicted alpha/beta h 24.0 1.4E+02 0.003 32.2 5.2 34 359-392 298-331 (784)
223 COG0412 Dienelactone hydrolase 23.7 1.3E+02 0.0028 28.2 4.8 43 135-178 90-132 (236)
224 COG4425 Predicted membrane pro 23.4 1.1E+02 0.0023 31.8 4.1 36 134-169 373-408 (588)
225 PF03959 FSH1: Serine hydrolas 23.4 82 0.0018 28.9 3.2 48 365-444 161-208 (212)
226 KOG1516 Carboxylesterase and r 23.2 1.8E+02 0.0039 30.9 6.3 33 143-176 181-213 (545)
227 PF05049 IIGP: Interferon-indu 23.1 45 0.00098 33.8 1.5 52 67-120 34-97 (376)
228 COG2945 Predicted hydrolase of 22.9 71 0.0015 29.2 2.5 60 362-455 146-205 (210)
229 KOG2565 Predicted hydrolases o 22.6 1.9E+02 0.0042 29.3 5.6 130 48-204 135-266 (469)
230 PRK10115 protease 2; Provision 22.6 1.4E+02 0.0031 33.0 5.4 28 365-392 605-633 (686)
231 KOG3877 NADH:ubiquinone oxidor 22.4 81 0.0018 30.5 2.9 51 104-171 67-117 (393)
232 PRK13962 bifunctional phosphog 21.7 1.1E+02 0.0023 33.6 4.1 62 135-206 574-636 (645)
233 PF05414 DUF1717: Viral domain 21.7 57 0.0012 25.1 1.4 11 365-375 40-50 (101)
234 PLN02200 adenylate kinase fami 21.2 79 0.0017 29.7 2.7 20 62-81 37-56 (234)
235 TIGR01840 esterase_phb esteras 21.1 72 0.0016 29.1 2.4 110 66-201 12-129 (212)
236 PF11713 Peptidase_C80: Peptid 21.0 1.9E+02 0.0042 25.3 4.9 69 117-185 62-132 (157)
237 PRK15492 triosephosphate isome 20.3 1.5E+02 0.0032 28.5 4.3 60 136-206 189-249 (260)
238 cd03871 M14_CPB Peptidase M14 20.1 1.7E+02 0.0037 28.7 4.8 33 139-173 10-42 (300)
No 1
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=100.00 E-value=2.9e-104 Score=795.26 Aligned_cols=402 Identities=26% Similarity=0.450 Sum_probs=330.9
Q ss_pred CCCCCceeeeeEeCC--CceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhcccccccCCCccc-----CCCCCcc
Q 012237 31 NQDASEEWGYVEVRP--KAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTY-----LKPRNST 103 (467)
Q Consensus 31 ~~~~~~~sGyv~v~~--~~~lFywf~es~~~~~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~-----l~~n~~s 103 (467)
.+++++|||||+|++ +.+||||||||+ ++|+++ ||||||||||||||++ |+|+|+|||+++ |..|+||
T Consensus 39 ~~~f~~ysGYv~v~~~~~~~LFYwf~eS~---~~P~~d-PlvLWLnGGPGCSSl~-G~~~E~GPf~v~~~G~tL~~N~yS 113 (454)
T KOG1282|consen 39 PLPFKQYSGYVTVNESEGRQLFYWFFESE---NNPETD-PLVLWLNGGPGCSSLG-GLFEENGPFRVKYNGKTLYLNPYS 113 (454)
T ss_pred CCCcccccceEECCCCCCceEEEEEEEcc---CCCCCC-CEEEEeCCCCCccchh-hhhhhcCCeEEcCCCCcceeCCcc
Confidence 346899999999984 579999999996 578665 9999999999999995 999999999985 6779999
Q ss_pred hhccccceeecCCCccccccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHH
Q 012237 104 WLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAI 183 (467)
Q Consensus 104 W~~~anvlfiDqPvGtGFSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~ 183 (467)
|||.||||||||||||||||+++...+.++|+.+|+|+++||++||++||||++|||||+||||||||||+||++|++.|
T Consensus 114 Wnk~aNiLfLd~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N 193 (454)
T KOG1282|consen 114 WNKEANILFLDQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGN 193 (454)
T ss_pred ccccccEEEEecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhcc
Confidence 99999999999999999999998877778999999999999999999999999999999999999999999999999998
Q ss_pred HcC-cceeeeeeEeecCCCCCccchhcccccccccCCCCChhHHHHHHHHHHHHHHHhhcCCccchhhHHHHHHHHHH-h
Q 012237 184 EAG-KLKLKLGGVALGDSWISPEDFVFSWGPLLKDMSRLDTNGFAKSNQIAQKIKQQLEAGEFVGATDSWAQLESVIS-Q 261 (467)
Q Consensus 184 ~~~-~~~inLkGi~IGNg~i~p~~~~~~~~~~~~~~glid~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~-~ 261 (467)
+.. ...|||||++||||++|+..+..++.+|++.+|+|++..++.+++.|..+.... .........|..+...+. .
T Consensus 194 ~~~~~~~iNLkG~~IGNg~td~~~~~~~~~~~a~~h~liSde~~~~l~~~C~~~~~~~--~~~~~~~~~C~~~~~~~~~~ 271 (454)
T KOG1282|consen 194 KKCCKPNINLKGYAIGNGLTDPEIDYNGRIPFAWGHGLISDELYESLKRACDFSSDNY--ANVDPSNTKCNKAVEEFDSK 271 (454)
T ss_pred ccccCCcccceEEEecCcccCccccccchhhhhhhcccCCHHHHHHHHHHhccCcccc--cccCCchhHHHHHHHHHHHH
Confidence 764 578999999999999999999999999999999999877655444322221100 011112445766655555 6
Q ss_pred hCCCcccccccccCCCCCcccccccccccccchhhhhhhcccCCCCCCCCchhhhhccH-HHHHHhccCCCCc-cccccC
Q 012237 262 NSNAVDFYNFLLDSGMDPVSLTASTLAVGASMRKYSRYLSAHKSSTPDGDGDVGSLMNG-VIKKKLKIIPENI-TWGGQS 339 (467)
Q Consensus 262 ~~~~~n~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~p~~~~~v~~~lN~-~V~~aL~i~~~~~-~w~~cs 339 (467)
....++.|+++.+.|....... ..+.... ...+|......+|||+ +||+|||+..... +|+.||
T Consensus 272 ~~~~i~~y~i~~~~C~~~~~~~-------~~~~~~~-------~~~~c~~~~~~~ylN~~~VrkALh~~~~~~~~W~~Cn 337 (454)
T KOG1282|consen 272 TTGDIDNYYILTPDCYPTSYEL-------KKPTDCY-------GYDPCLSDYAEKYLNRPEVRKALHANKTSIGKWERCN 337 (454)
T ss_pred HhccCchhhhcchhhccccccc-------ccccccc-------ccCCchhhhHHHhcCCHHHHHHhCCCCCCCCcccccC
Confidence 6678888888877665311000 0000000 1234555455889999 6999999976655 799999
Q ss_pred hhHhhhhcCCCCCccHHHHHHHHhcC-ceEEEEeccCCcCCCchhHHHHHHHcCcccccccccCCCeeeEeCCCceeeeE
Q 012237 340 DSVFTELSGDFMRPRISEVDELLAKG-VNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGF 418 (467)
Q Consensus 340 ~~v~~~~~~D~~~~~~~~l~~LL~~~-irVLiy~Gd~D~i~n~~g~~~~i~~L~W~g~~~f~~~~~~pw~~~~~~~~~G~ 418 (467)
+.|...+. |...++++.+..++.++ +|||||+||.|++||+.||++|+++|+++...+| +||++++ +|++||
T Consensus 338 ~~v~~~~~-~~~~sm~p~~~~~~~~~~~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~-----~pW~~~~-~qvaG~ 410 (454)
T KOG1282|consen 338 DEVNYNYN-DDIKSMLPIHKKLIASGGYRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEW-----RPWYHKG-GQVAGY 410 (454)
T ss_pred hhhhcccc-cCccchHHHHHHHhhcCceEEEEEeCCcceeCcchhhHHHHHhccCccccCc-----cCCccCC-Cceeee
Confidence 99986643 44667778888888865 9999999999999999999999999997665554 8999843 689999
Q ss_pred EEEEcCEEEEEEcCCcccccCCCCcHHHHHHHHHHhcCCCccc
Q 012237 419 KKSYKNLHFYWILGAGHFQVPVDQPCIALNMLAAMTDSPASAS 461 (467)
Q Consensus 419 ~k~~~nltf~~V~~AGHm~vP~dqP~~a~~mi~~fl~~~~~~~ 461 (467)
+++|++|+|+||+||||| ||.|||++|++||++||+|.+.+.
T Consensus 411 ~~~Y~~ltf~tVrGaGH~-VP~~~p~~al~m~~~fl~g~~l~~ 452 (454)
T KOG1282|consen 411 TKTYGGLTFATVRGAGHM-VPYDKPESALIMFQRFLNGQPLPS 452 (454)
T ss_pred EEEecCEEEEEEeCCccc-CCCCCcHHHHHHHHHHHcCCCCCC
Confidence 999999999999999999 999999999999999999988765
No 2
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=100.00 E-value=1.5e-97 Score=765.13 Aligned_cols=392 Identities=34% Similarity=0.618 Sum_probs=306.9
Q ss_pred CCCCCceeeeeEeC--CCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhcccccccCCCccc------CCCCCc
Q 012237 31 NQDASEEWGYVEVR--PKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTY------LKPRNS 102 (467)
Q Consensus 31 ~~~~~~~sGyv~v~--~~~~lFywf~es~~~~~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~------l~~n~~ 102 (467)
++++++|||||+|+ .+++||||||||+ ++|++ +||||||||||||||| .|+|+|+|||+++ +..|++
T Consensus 6 ~~~~~~~sGyl~~~~~~~~~lfyw~~~s~---~~~~~-~Pl~~wlnGGPG~SS~-~g~f~e~GP~~~~~~~~~~l~~n~~ 80 (415)
T PF00450_consen 6 PVPFKQYSGYLPVNDNENAHLFYWFFESR---NDPED-DPLILWLNGGPGCSSM-WGLFGENGPFRINPDGPYTLEDNPY 80 (415)
T ss_dssp -SSSEEEEEEEEECTTTTEEEEEEEEE-S---SGGCS-S-EEEEEE-TTTB-TH-HHHHCTTSSEEEETTSTSEEEE-TT
T ss_pred CCCceEEEEEEecCCCCCcEEEEEEEEeC---CCCCC-ccEEEEecCCceeccc-cccccccCceEEeeccccccccccc
Confidence 47799999999998 5689999999985 46755 5999999999999999 6999999999987 467999
Q ss_pred chhccccceeecCCCccccccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHH
Q 012237 103 TWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKA 182 (467)
Q Consensus 103 sW~~~anvlfiDqPvGtGFSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~ 182 (467)
||+++||||||||||||||||+.+.+.++.+++++|+++++||++||.+||+|+++||||+||||||+|||.||.+|+++
T Consensus 81 sW~~~an~l~iD~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~ 160 (415)
T PF00450_consen 81 SWNKFANLLFIDQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQ 160 (415)
T ss_dssp -GGGTSEEEEE--STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHH
T ss_pred ccccccceEEEeecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhc
Confidence 99999999999999999999998776678899999999999999999999999999999999999999999999999998
Q ss_pred HHcC-cceeeeeeEeecCCCCCccchhcccccccccCCCCChhHHHHHHHHHHHHHHHhhcCCccchhhHHHHHHHHH--
Q 012237 183 IEAG-KLKLKLGGVALGDSWISPEDFVFSWGPLLKDMSRLDTNGFAKSNQIAQKIKQQLEAGEFVGATDSWAQLESVI-- 259 (467)
Q Consensus 183 ~~~~-~~~inLkGi~IGNg~i~p~~~~~~~~~~~~~~glid~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~-- 259 (467)
++++ ..+||||||+||||++||..+..++.++++.+|+|++..++.+++.++.+ . .+......|......+
T Consensus 161 ~~~~~~~~inLkGi~IGng~~dp~~~~~s~~~~~~~~gli~~~~~~~~~~~~~~~----~--~~~~~~~~c~~~~~~~~~ 234 (415)
T PF00450_consen 161 NKKGDQPKINLKGIAIGNGWIDPRIQYNSYADYAYYHGLIDDQQYDDLNKACEAC----P--QCQKAITECAAALDELSC 234 (415)
T ss_dssp TCC--STTSEEEEEEEESE-SBHHHHHHHHHHHHHHTTSS-HHHHHHHHHHHTTS----H--SSSCCHHHHHHHHHHHHH
T ss_pred cccccccccccccceecCccccccccceeecccccccCcccHHHHHHHHHHhhcc----c--cccchhhHHHHHHHhhhh
Confidence 7654 46899999999999999999999999999999999987766655433221 1 1222333444333322
Q ss_pred ----HhhCCCcccccccccCCCCCcccccccccccccchhhhhhhcccCCCCCCCCchhhhhccH-HHHHHhccC-CCCc
Q 012237 260 ----SQNSNAVDFYNFLLDSGMDPVSLTASTLAVGASMRKYSRYLSAHKSSTPDGDGDVGSLMNG-VIKKKLKII-PENI 333 (467)
Q Consensus 260 ----~~~~~~~n~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~p~~~~~v~~~lN~-~V~~aL~i~-~~~~ 333 (467)
....+++|+||++..|+..... .+... ....+.....+..|||+ +||++|||. +...
T Consensus 235 ~~~~~~~~~~~n~Ydi~~~~~~~~~~----------------~~~~~-~~~~~~~~~~~~~yln~~~Vr~aL~v~~~~~~ 297 (415)
T PF00450_consen 235 QYAISQCNGGINPYDIRQPCYNPSRS----------------SYDNS-PSNDPPDDDYLEAYLNRPDVREALHVPVDSNV 297 (415)
T ss_dssp HCHHHHHHTTSETTSTTSEETT-SHC----------------TTCCC-CTTTTTCHHHHHHHHTSHHHHHHTT-STTTSS
T ss_pred hcccccccCCcceeeeeccccccccc----------------ccccc-ccccccchhhHHHHhccHHHHHhhCCCcccCC
Confidence 2356799999999888531000 00000 00112233567889998 799999986 4567
Q ss_pred cccccChhH-hhhhcCCCCCccHHHHHHHHhcCceEEEEeccCCcCCCchhHHHHHHHcCcccccccccCCCeeeEeCCC
Q 012237 334 TWGGQSDSV-FTELSGDFMRPRISEVDELLAKGVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGND 412 (467)
Q Consensus 334 ~w~~cs~~v-~~~~~~D~~~~~~~~l~~LL~~~irVLiy~Gd~D~i~n~~g~~~~i~~L~W~g~~~f~~~~~~pw~~~~~ 412 (467)
+|..|+..| +..+..|.+.++...++.||++++|||||+||.|++||+.|+++|+++|+|+++++|+.++++ .+
T Consensus 298 ~w~~~~~~V~~~~~~~d~~~~~~~~l~~lL~~~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~-----~~ 372 (415)
T PF00450_consen 298 NWQSCNDAVNFNWLYDDFMPSSIPDLPELLDNGIRVLIYNGDLDLICNFLGTERWIDNLNWSGKDGFRQWPRK-----VN 372 (415)
T ss_dssp S--SB-HHHHHHCCTCCC-SBCHHHHHHHHHTT-EEEEEEETT-SSS-HHHHHHHHHCTECTEEEEEEEEEEE-----TT
T ss_pred cccccCcccccccccccccccchhhhhhhhhccceeEEeccCCCEEEEeccchhhhhccccCccccccccccc-----cc
Confidence 999999999 555677888999999999999999999999999999999999999999999999999876655 34
Q ss_pred ceeeeEEEEEcCEEEEEEcCCcccccCCCCcHHHHHHHHHHhcC
Q 012237 413 KITKGFKKSYKNLHFYWILGAGHFQVPVDQPCIALNMLAAMTDS 456 (467)
Q Consensus 413 ~~~~G~~k~~~nltf~~V~~AGHm~vP~dqP~~a~~mi~~fl~~ 456 (467)
++++||+|+++||||++|++|||| ||+|||+++++||++||+|
T Consensus 373 ~~~~G~~k~~~~ltf~~V~~AGHm-vP~dqP~~a~~m~~~fl~g 415 (415)
T PF00450_consen 373 GQVAGYVKQYGNLTFVTVRGAGHM-VPQDQPEAALQMFRRFLKG 415 (415)
T ss_dssp CSEEEEEEEETTEEEEEETT--SS-HHHHSHHHHHHHHHHHHCT
T ss_pred ccccceeEEeccEEEEEEcCCccc-ChhhCHHHHHHHHHHHhcC
Confidence 689999999999999999999999 9999999999999999987
No 3
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=100.00 E-value=1.1e-94 Score=743.82 Aligned_cols=393 Identities=25% Similarity=0.474 Sum_probs=338.2
Q ss_pred ccCCCCCCCceeeeeEeCC---CceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhcccccccCCCccc-----CC
Q 012237 27 ALNKNQDASEEWGYVEVRP---KAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTY-----LK 98 (467)
Q Consensus 27 ~~~~~~~~~~~sGyv~v~~---~~~lFywf~es~~~~~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~-----l~ 98 (467)
++.-.++++++||||+|++ +++||||||||+ ++|++ +||||||||||||||| .|+|+|+|||+++ +.
T Consensus 38 ~~~~~~~~~~~sGy~~v~~~~~~~~lFyw~~~s~---~~~~~-~Pl~lwlnGGPG~ss~-~G~f~E~GP~~i~~~~~~~~ 112 (462)
T PTZ00472 38 WAPCDPSVNQWSGYFDIPGNQTDKHYFYWAFGPR---NGNPE-APVLLWMTGGPGCSSM-FALLAENGPCLMNETTGDIY 112 (462)
T ss_pred ccccCCCCcceeEEEEeCCCCCCceEEEEEEEcC---CCCCC-CCEEEEECCCCcHHHH-HhhhccCCCeEEeCCCCcee
Confidence 3444456889999999964 579999999985 46755 5999999999999999 7999999999985 44
Q ss_pred CCCcchhccccceeecCCCccccccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHH
Q 012237 99 PRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLA 178 (467)
Q Consensus 99 ~n~~sW~~~anvlfiDqPvGtGFSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~ 178 (467)
.|++||++.+||||||||+||||||+... ....+++++|+|+++||+.||++||+++++|+||+||||||+|+|.+|.+
T Consensus 113 ~n~~sW~~~~~~l~iDqP~G~G~S~~~~~-~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~ 191 (462)
T PTZ00472 113 NNTYSWNNEAYVIYVDQPAGVGFSYADKA-DYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYR 191 (462)
T ss_pred ECCcccccccCeEEEeCCCCcCcccCCCC-CCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHH
Confidence 69999999999999999999999998754 45678899999999999999999999999999999999999999999999
Q ss_pred HHHHHHcC-cceeeeeeEeecCCCCCccchhccccccccc-------CCCCChhHHHHHHHHHHHHHHHhhcCCccc---
Q 012237 179 AVKAIEAG-KLKLKLGGVALGDSWISPEDFVFSWGPLLKD-------MSRLDTNGFAKSNQIAQKIKQQLEAGEFVG--- 247 (467)
Q Consensus 179 i~~~~~~~-~~~inLkGi~IGNg~i~p~~~~~~~~~~~~~-------~glid~~~~~~~~~~~~~~~~~~~~~~~~~--- 247 (467)
|+++|+++ .++||||||+|||||+||..|+.++.+|++. .++|++..++.+++..+.|++.++.|+...
T Consensus 192 i~~~n~~~~~~~inLkGi~IGNg~~dp~~q~~~~~~~a~~~~~~~~~~~li~~~~~~~~~~~~~~c~~~~~~c~~~~~~~ 271 (462)
T PTZ00472 192 INMGNKKGDGLYINLAGLAVGNGLTDPYTQYASYPRLAWDWCKEKLGAPCVSEEAYDEMSSMVPACQKKIKECNSNPDDA 271 (462)
T ss_pred HHhhccccCCceeeeEEEEEeccccChhhhcccHHHHhhhcccccCCCCccCHHHHHHHHHHHHHHHHHHHhccccCCCc
Confidence 99988765 4789999999999999999999999999985 589999999998888888988887775421
Q ss_pred ------hhhHHHHHHHHHHhhCCCcccccccccCCCCCcccccccccccccchhhhhhhcccCCCCCCCCchhhhhccH-
Q 012237 248 ------ATDSWAQLESVISQNSNAVDFYNFLLDSGMDPVSLTASTLAVGASMRKYSRYLSAHKSSTPDGDGDVGSLMNG- 320 (467)
Q Consensus 248 ------a~~~~~~~~~~~~~~~~~~n~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~p~~~~~v~~~lN~- 320 (467)
+...|..+...+. ..++|+||++..|.. +.+ + ....+..|||+
T Consensus 272 ~~~c~~a~~~c~~~~~~~~--~~g~n~Ydi~~~c~~-~~c--------------~-------------~~~~~~~yLN~~ 321 (462)
T PTZ00472 272 DSSCSVARALCNEYIAVYS--ATGLNNYDIRKPCIG-PLC--------------Y-------------NMDNTIAFMNRE 321 (462)
T ss_pred chHHHHHHHHHHHHHHHHH--hcCCChhheeccCCC-CCc--------------c-------------CHHHHHHHhCCH
Confidence 1223444333222 457899999877521 100 0 01246778888
Q ss_pred HHHHHhccCCCCccccccChhHhhhhcCCCCCccHHHHHHHHhcCceEEEEeccCCcCCCchhHHHHHHHcCcccccccc
Q 012237 321 VIKKKLKIIPENITWGGQSDSVFTELSGDFMRPRISEVDELLAKGVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFL 400 (467)
Q Consensus 321 ~V~~aL~i~~~~~~w~~cs~~v~~~~~~D~~~~~~~~l~~LL~~~irVLiy~Gd~D~i~n~~g~~~~i~~L~W~g~~~f~ 400 (467)
+||++||+. ..+|..|+..|+..+..|++.++.+.++.||++|+|||||+||.|++||+.|+++|+++|+|+++++|+
T Consensus 322 ~Vq~AL~v~--~~~w~~c~~~V~~~~~~D~~~~~~~~l~~LL~~gikVLiYnGd~D~icn~~Gt~~wi~~L~w~g~~~f~ 399 (462)
T PTZ00472 322 DVQSSLGVK--PATWQSCNMEVNLMFEMDWMKNFNYTVPGLLEDGVRVMIYAGDMDFICNWIGNKAWTLALQWPGNAEFN 399 (462)
T ss_pred HHHHHhCCC--CCCceeCCHHHHHHhhhccccchHHHHHHHHhcCceEEEEECCcCeecCcHhHHHHHHhCCCCCccchh
Confidence 699999985 358999999999999899999999999999999999999999999999999999999999999999999
Q ss_pred cCCCeeeEeCCCceeeeEEEEEc-----CEEEEEEcCCcccccCCCCcHHHHHHHHHHhcCCCc
Q 012237 401 STERTPLFCGNDKITKGFKKSYK-----NLHFYWILGAGHFQVPVDQPCIALNMLAAMTDSPAS 459 (467)
Q Consensus 401 ~~~~~pw~~~~~~~~~G~~k~~~-----nltf~~V~~AGHm~vP~dqP~~a~~mi~~fl~~~~~ 459 (467)
+++++||+.. +++++||+|+++ ||+|++|++|||| ||.|||+++++|+++|+++++.
T Consensus 400 ~a~~~~w~~~-~~~v~G~vk~~~~~~~~~l~~~~V~~AGH~-vp~d~P~~~~~~i~~fl~~~~~ 461 (462)
T PTZ00472 400 AAPDVPFSAV-DGRWAGLVRSAASNTSSGFSFVQVYNAGHM-VPMDQPAVALTMINRFLRNRPL 461 (462)
T ss_pred hcCccccEec-CCEeceEEEEEecccCCCeEEEEECCCCcc-ChhhHHHHHHHHHHHHHcCCCC
Confidence 9999999531 257899999999 9999999999999 9999999999999999999763
No 4
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=100.00 E-value=2.8e-94 Score=731.84 Aligned_cols=384 Identities=21% Similarity=0.352 Sum_probs=310.9
Q ss_pred CCCCceeeeeEeCC--CceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhcccccccCCCccc----------CCC
Q 012237 32 QDASEEWGYVEVRP--KAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTY----------LKP 99 (467)
Q Consensus 32 ~~~~~~sGyv~v~~--~~~lFywf~es~~~~~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~----------l~~ 99 (467)
.+++++|||++|++ +.++|||||||+ ++|++ +||||||||||||||| .|+|+|+|||+++ +..
T Consensus 33 ~~~~~~sGy~~v~~~~~~~lfy~f~es~---~~~~~-~P~~lWlnGGPG~SS~-~g~~~e~GP~~~~~~~~~~~~~~l~~ 107 (433)
T PLN03016 33 LPFELETGYIGIGEDENVQFFYYFIKSE---NNPKE-DPLLIWLNGGPGCSCL-GGIIFENGPVGLKFEVFNGSAPSLFS 107 (433)
T ss_pred CCeeEEEEEEEecCCCCeEEEEEEEecC---CCccc-CCEEEEEcCCCcHHHH-HHHHHhcCCceeeccccCCCCCceee
Confidence 34789999999975 468999999985 46755 4999999999999999 6999999999863 456
Q ss_pred CCcchhccccceeecCCCccccccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHH
Q 012237 100 RNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAA 179 (467)
Q Consensus 100 n~~sW~~~anvlfiDqPvGtGFSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i 179 (467)
|++||++.|||||||||+||||||+++.... .+++++|+++++||++||++||+|+++||||+||||||||||.+|++|
T Consensus 108 n~~sW~~~anllfiDqPvGtGfSy~~~~~~~-~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i 186 (433)
T PLN03016 108 TTYSWTKMANIIFLDQPVGSGFSYSKTPIDK-TGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEI 186 (433)
T ss_pred CCCchhhcCcEEEecCCCCCCccCCCCCCCc-cCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHH
Confidence 9999999999999999999999998765443 456667799999999999999999999999999999999999999999
Q ss_pred HHHHHcC-cceeeeeeEeecCCCCCccchhcccccccccCCCCChhHHHHHHHHHHHHHHHhhcCCccchhhHHHHHHHH
Q 012237 180 VKAIEAG-KLKLKLGGVALGDSWISPEDFVFSWGPLLKDMSRLDTNGFAKSNQIAQKIKQQLEAGEFVGATDSWAQLESV 258 (467)
Q Consensus 180 ~~~~~~~-~~~inLkGi~IGNg~i~p~~~~~~~~~~~~~~glid~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 258 (467)
.+.|+++ +.+||||||+||||+++|..+..++.+|++.+|+|++++++.+++.++.+ .. ....+...|..+...
T Consensus 187 ~~~n~~~~~~~inLkGi~iGNg~t~~~~~~~~~~~y~~~~glI~~~~~~~i~~~c~~~---~~--~~~~~~~~C~~~~~~ 261 (433)
T PLN03016 187 SQGNYICCEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGN---YY--NVDPSNTQCLKLTEE 261 (433)
T ss_pred HhhcccccCCcccceeeEecCCCcCchhhhhhHHHHHHhcCCCCHHHHHHHHHHhccc---cc--cCCCchHHHHHHHHH
Confidence 9877543 56899999999999999999999999999999999998776655433221 11 111344567777666
Q ss_pred HHhhCCCcccccccccCCCCCcccccccccccccchhhhhhhcccCCCCCCCCchhhhhccH-HHHHHhccCCC-Ccccc
Q 012237 259 ISQNSNAVDFYNFLLDSGMDPVSLTASTLAVGASMRKYSRYLSAHKSSTPDGDGDVGSLMNG-VIKKKLKIIPE-NITWG 336 (467)
Q Consensus 259 ~~~~~~~~n~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~p~~~~~v~~~lN~-~V~~aL~i~~~-~~~w~ 336 (467)
+..+.+.+|.||++.++|. +...+ ...++. + ....+..|||+ +||++||+.+. ..+|.
T Consensus 262 ~~~~~~~~n~yni~~~~~~-~~~~~--------~~~c~~-~----------~~~~~~~ylN~~~V~~aL~v~~~~~~~w~ 321 (433)
T PLN03016 262 YHKCTAKINIHHILTPDCD-VTNVT--------SPDCYY-Y----------PYHLIECWANDESVREALHIEKGSKGKWA 321 (433)
T ss_pred HHHHhcCCChhhccCCccc-ccccC--------CCcccc-c----------chHHHHHHhCCHHHHHHhCCCCCCCCCCc
Confidence 6677788999999865442 11100 000000 0 01246789998 69999998754 46899
Q ss_pred ccChhHhhhhcCCCCCccHHHHHHHHhcCceEEEEeccCCcCCCchhHHHHHHHcCcccccccccCCCeeeEeCCCceee
Q 012237 337 GQSDSVFTELSGDFMRPRISEVDELLAKGVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITK 416 (467)
Q Consensus 337 ~cs~~v~~~~~~D~~~~~~~~l~~LL~~~irVLiy~Gd~D~i~n~~g~~~~i~~L~W~g~~~f~~~~~~pw~~~~~~~~~ 416 (467)
.||..|. +..|.+.+ .+.+..++.+|+|||||+||.|++||+.|+++|+++|+|++.++| +||+++ ++++
T Consensus 322 ~cn~~v~--~~~d~~~~-~~~~~~~l~~~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~-----~~w~~~--~~~~ 391 (433)
T PLN03016 322 RCNRTIP--YNHDIVSS-IPYHMNNSISGYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNW-----RPWMIN--NQIA 391 (433)
T ss_pred cCCcccc--cccccchh-hHHHHHHHhcCceEEEEECCccccCCcHhHHHHHHhCCCCCCCCc-----ccccCC--CEee
Confidence 9999886 44565543 334445556789999999999999999999999999999998765 689864 5799
Q ss_pred eEEEEEcC-EEEEEEcCCcccccCCCCcHHHHHHHHHHhcCCC
Q 012237 417 GFKKSYKN-LHFYWILGAGHFQVPVDQPCIALNMLAAMTDSPA 458 (467)
Q Consensus 417 G~~k~~~n-ltf~~V~~AGHm~vP~dqP~~a~~mi~~fl~~~~ 458 (467)
||+|+|+| |||++|++|||| || |||++|++||++||++.+
T Consensus 392 G~vk~y~n~ltfv~V~~AGHm-Vp-~qP~~al~m~~~Fi~~~~ 432 (433)
T PLN03016 392 GYTRAYSNKMTFATIKAGGHT-AE-YRPNETFIMFQRWISGQP 432 (433)
T ss_pred eEEEEeCCceEEEEEcCCCCC-CC-CCHHHHHHHHHHHHcCCC
Confidence 99999986 999999999999 98 799999999999999875
No 5
>PLN02209 serine carboxypeptidase
Probab=100.00 E-value=4.9e-92 Score=715.33 Aligned_cols=383 Identities=21% Similarity=0.344 Sum_probs=302.3
Q ss_pred CCCCceeeeeEeCC--CceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhcccccccCCCccc----------CCC
Q 012237 32 QDASEEWGYVEVRP--KAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTY----------LKP 99 (467)
Q Consensus 32 ~~~~~~sGyv~v~~--~~~lFywf~es~~~~~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~----------l~~ 99 (467)
.+++++|||++|++ ++++|||||||+ ++|++ +||+|||||||||||| .|+|.|+|||+++ +..
T Consensus 35 ~~~~~~sGy~~v~~~~~~~lf~~f~es~---~~~~~-~Pl~lWlnGGPG~SS~-~g~f~e~GP~~~~~~~~~~~~~~l~~ 109 (437)
T PLN02209 35 LPFELETGYIGIGEEENVQFFYYFIKSD---KNPQE-DPLIIWLNGGPGCSCL-SGLFFENGPLALKNKVYNGSVPSLVS 109 (437)
T ss_pred CCeeEEEEEEEecCCCCeEEEEEEEecC---CCCCC-CCEEEEECCCCcHHHh-hhHHHhcCCceeccCCCCCCccccee
Confidence 45789999999975 468999999985 46755 4999999999999999 7999999999974 346
Q ss_pred CCcchhccccceeecCCCccccccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHH
Q 012237 100 RNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAA 179 (467)
Q Consensus 100 n~~sW~~~anvlfiDqPvGtGFSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i 179 (467)
|++||++.|||||||||+||||||+.++... .+++++|+++++||++||++||+|+++||||+||||||||||.||.+|
T Consensus 110 n~~sW~~~anllfiDqPvGtGfSy~~~~~~~-~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i 188 (437)
T PLN02209 110 TTYSWTKTANIIFLDQPVGSGFSYSKTPIER-TSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEI 188 (437)
T ss_pred CCCchhhcCcEEEecCCCCCCccCCCCCCCc-cCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHH
Confidence 9999999999999999999999998765444 445667799999999999999999999999999999999999999999
Q ss_pred HHHHHc-CcceeeeeeEeecCCCCCccchhcccccccccCCCCChhHHHHHHHHHHHHHHHhhcCCccchhhHHHHHHHH
Q 012237 180 VKAIEA-GKLKLKLGGVALGDSWISPEDFVFSWGPLLKDMSRLDTNGFAKSNQIAQKIKQQLEAGEFVGATDSWAQLESV 258 (467)
Q Consensus 180 ~~~~~~-~~~~inLkGi~IGNg~i~p~~~~~~~~~~~~~~glid~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 258 (467)
.+.+++ .+.+||||||+||||++||..+..++.+|++.+|+|++++++.+++.+. .+... .......|..+...
T Consensus 189 ~~~~~~~~~~~inl~Gi~igng~td~~~q~~~~~~y~~~~glI~~~~~~~~~~~c~---~~~~~--~~~~~~~C~~~i~~ 263 (437)
T PLN02209 189 SKGNYICCNPPINLQGYVLGNPITHIEFEQNFRIPYAHGMSLISDELYESLKRICK---GNYFS--VDPSNKKCLKLVEE 263 (437)
T ss_pred HhhcccccCCceeeeeEEecCcccChhhhhhhHHHHHhccCCCCHHHHHHHHHhcc---ccccc--CCCChHHHHHHHHH
Confidence 987653 3568999999999999999999999999999999999887766554322 11100 11123345555444
Q ss_pred HHhhCCCcccccccccCCCCCcccccccccccccchhhhhhhcccCCCCCCC---CchhhhhccH-HHHHHhccCCCC-c
Q 012237 259 ISQNSNAVDFYNFLLDSGMDPVSLTASTLAVGASMRKYSRYLSAHKSSTPDG---DGDVGSLMNG-VIKKKLKIIPEN-I 333 (467)
Q Consensus 259 ~~~~~~~~n~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~p~~---~~~v~~~lN~-~V~~aL~i~~~~-~ 333 (467)
...+...++.|+++...|..... +.+. .+|. ...+..|||+ +||++||+.... .
T Consensus 264 ~~~~~~~~~~~~~~~~~c~~~~~-----------------~~~~----~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~~~ 322 (437)
T PLN02209 264 YHKCTDNINSHHTLIANCDDSNT-----------------QHIS----PDCYYYPYHLVECWANNESVREALHVDKGSIG 322 (437)
T ss_pred HHHHhhcCCcccccccccccccc-----------------ccCC----CCcccccHHHHHHHhCCHHHHHHhCCCCCCCC
Confidence 44455667777644332221100 0000 0111 1346789999 699999986332 3
Q ss_pred cccccChhHhhhhcCCCCCccHHHHHHHHhcCceEEEEeccCCcCCCchhHHHHHHHcCcccccccccCCCeeeEeCCCc
Q 012237 334 TWGGQSDSVFTELSGDFMRPRISEVDELLAKGVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDK 413 (467)
Q Consensus 334 ~w~~cs~~v~~~~~~D~~~~~~~~l~~LL~~~irVLiy~Gd~D~i~n~~g~~~~i~~L~W~g~~~f~~~~~~pw~~~~~~ 413 (467)
.|..|+..+. +..|.+.+....+ .+|.+|+|||||+||.|++||+.|+++|+++|+|++.+.| +||+++ +
T Consensus 323 ~w~~~~~~~~--~~~d~~~~~~~~~-~~l~~girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~-----~~w~~~--~ 392 (437)
T PLN02209 323 EWIRDHRGIP--YKSDIRSSIPYHM-NNSINGYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDW-----RPWMIK--G 392 (437)
T ss_pred CCccccchhh--cccchhhhHHHHH-HHHhcCceEEEEECCccccCCcHhHHHHHHhcCCccCCCe-----eeeEEC--C
Confidence 6999987553 4567665443344 4455789999999999999999999999999999998875 699974 5
Q ss_pred eeeeEEEEEcC-EEEEEEcCCcccccCCCCcHHHHHHHHHHhcCCC
Q 012237 414 ITKGFKKSYKN-LHFYWILGAGHFQVPVDQPCIALNMLAAMTDSPA 458 (467)
Q Consensus 414 ~~~G~~k~~~n-ltf~~V~~AGHm~vP~dqP~~a~~mi~~fl~~~~ 458 (467)
+++||+|+|+| |||++|+||||| || |||++|++||++||++.+
T Consensus 393 q~aG~vk~y~n~Ltfv~V~~AGHm-Vp-~qP~~al~m~~~fi~~~~ 436 (437)
T PLN02209 393 QIAGYTRTYSNKMTFATVKGGGHT-AE-YLPEESSIMFQRWISGQP 436 (437)
T ss_pred EeeeEEEEeCCceEEEEEcCCCCC-cC-cCHHHHHHHHHHHHcCCC
Confidence 79999999996 999999999999 98 799999999999999875
No 6
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.7e-84 Score=601.29 Aligned_cols=411 Identities=52% Similarity=0.922 Sum_probs=370.8
Q ss_pred CceeeeeEeCCCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhcccccccCCCcccCCCCCcchhccccceeec
Q 012237 35 SEEWGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVD 114 (467)
Q Consensus 35 ~~~sGyv~v~~~~~lFywf~es~~~~~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~l~~n~~sW~~~anvlfiD 114 (467)
++-|||++|+.++|+|||.|.+... -+..+||.|||+||||+||.++|+|.|+||...++++|+.+|-+.|+|||||
T Consensus 2 d~~wg~v~vr~~a~~F~wly~~~~~---~ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk~adllfvD 78 (414)
T KOG1283|consen 2 DEDWGYVDVRTGAHMFWWLYYATAN---VKSERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLKDADLLFVD 78 (414)
T ss_pred CccccceeeecCceEEEEEeeeccc---cccCCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhhhccEEEec
Confidence 5679999999999999999997642 2244699999999999999999999999999999999999999999999999
Q ss_pred CCCccccccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeee
Q 012237 115 NPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGG 194 (467)
Q Consensus 115 qPvGtGFSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkG 194 (467)
.|||+||||.+..+.++++.+++|.|+.+.|+.||..||+|+.+||||+-|||||+..+.+|..+.+.++.|+++.|+.|
T Consensus 79 nPVGaGfSyVdg~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~ 158 (414)
T KOG1283|consen 79 NPVGAGFSYVDGSSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIG 158 (414)
T ss_pred CCCcCceeeecCcccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeeccee
Confidence 99999999999888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCccchhcccccccccCCCCChhHHHHHHHHHHHHHHHhhcCCccchhhHHHHHHHHHHhhCCCccccccccc
Q 012237 195 VALGDSWISPEDFVFSWGPLLKDMSRLDTNGFAKSNQIAQKIKQQLEAGEFVGATDSWAQLESVISQNSNAVDFYNFLLD 274 (467)
Q Consensus 195 i~IGNg~i~p~~~~~~~~~~~~~~glid~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~n~y~i~~~ 274 (467)
+++|+.||+|.+...++++||++++++|+++++.+++.+++|+..++.+.+..|+..|...+..+..++..+|.||++.+
T Consensus 159 VaLGDSWISP~D~V~SWGP~L~~~S~LDD~GLds~ns~A~k~~~~v~~g~~~~AT~~Wg~~e~li~~~sn~VdfYNil~~ 238 (414)
T KOG1283|consen 159 VALGDSWISPEDFVFSWGPLLKHVSRLDDNGLDSSNSGAEKGKGGVDGGKWGGATGGWGGGENLISRESNGVDFYNILTK 238 (414)
T ss_pred EEccCcccChhHhhhcchHHHHhhhhhcccCccchhhhHHhhcccccCCccccccccccCcCcceeecccCcceeeeecc
Confidence 99999999999999999999999999999999999999999999999999999999888888889899999999999998
Q ss_pred CCCCCcccccccccccccchhhhhhhcccCCCCCCCCchhhhhccHHHHHHhccCCCCccccccChhHhhhhcCCCCCcc
Q 012237 275 SGMDPVSLTASTLAVGASMRKYSRYLSAHKSSTPDGDGDVGSLMNGVIKKKLKIIPENITWGGQSDSVFTELSGDFMRPR 354 (467)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~p~~~~~v~~~lN~~V~~aL~i~~~~~~w~~cs~~v~~~~~~D~~~~~ 354 (467)
...++...+.... .....+..++..-. ..+...+.+.++||..||++|+|+|+.+.|...+..|+..+..|+|.|+
T Consensus 239 t~~d~~~~ss~~~---~~~~~~~rrl~~~~-~~~~~~D~L~~lM~g~vrkkLgIip~~~~wGgqsg~vFt~lq~dFMKPv 314 (414)
T KOG1283|consen 239 TLGDQYSLSSRAA---MTPEEVMRRLLVRF-VGDEDRDKLSDLMNGPVRKKLGIIPGGVKWGGQSGDVFTKLQGDFMKPV 314 (414)
T ss_pred CCCcchhhhhhhh---cchHHHHHHHHhcc-CcchhHHHHHHHhcccccccccccCCCCcccCcCCchHHHhhhhhcccH
Confidence 8777665432211 11122333332110 1112235588999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCceEEEEeccCCcCCCchhHHHHHHHcCcccccccccCCCeeeEeCCCceeeeEEEEEcCEEEEEEcCCc
Q 012237 355 ISEVDELLAKGVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAG 434 (467)
Q Consensus 355 ~~~l~~LL~~~irVLiy~Gd~D~i~n~~g~~~~i~~L~W~g~~~f~~~~~~pw~~~~~~~~~G~~k~~~nltf~~V~~AG 434 (467)
...+.+||++|++|.||+|++|.||++.|+++|+..|.|+..+.|+..+|.-.+. +....||.|+|+||.|..|..||
T Consensus 315 i~~VdeLL~~Gv~V~VynG~lDlIc~T~G~~AWv~~l~w~~~p~f~~~~r~~~~~--s~~l~gy~ktyknl~f~wilrag 392 (414)
T KOG1283|consen 315 ISKVDELLNNGVNVTVYNGQLDLICATMGTEAWVEKLEWSAKPSFQVSPRVGITV--SRVLEGYEKTYKNLSFFWILRAG 392 (414)
T ss_pred HHHHHHHHhCCceEEEEecccchhhcccchhhhhhheecCCCCccccceeeeccc--eeecchhhhhhccceeEEeeccc
Confidence 9999999999999999999999999999999999999999999999998877765 45689999999999999999999
Q ss_pred ccccCCCCcHHHHHHHHHHhc
Q 012237 435 HFQVPVDQPCIALNMLAAMTD 455 (467)
Q Consensus 435 Hm~vP~dqP~~a~~mi~~fl~ 455 (467)
|| ||.|+|+.|.+|++.+.+
T Consensus 393 hm-vp~Dnp~~a~hmlr~vtk 412 (414)
T KOG1283|consen 393 HM-VPADNPAAASHMLRHVTK 412 (414)
T ss_pred Cc-ccCCCHHHHhhheeeccc
Confidence 99 999999999999987765
No 7
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=100.00 E-value=4.6e-71 Score=545.62 Aligned_cols=314 Identities=17% Similarity=0.264 Sum_probs=248.5
Q ss_pred cccceeecCCCccccccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHc-
Q 012237 107 KADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEA- 185 (467)
Q Consensus 107 ~anvlfiDqPvGtGFSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~- 185 (467)
.|||||||||+||||||++++... .+++++|+|++.||++||++||+|+++||||+||||||||||.||.+|++.+++
T Consensus 1 ~aNvLfiDqPvGvGfSy~~~~~~~-~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~ 79 (319)
T PLN02213 1 MANIIFLDQPVGSGFSYSKTPIDK-TGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYIC 79 (319)
T ss_pred CccEEEecCCCCCCCCCCCCCCCc-cccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccc
Confidence 489999999999999998765443 456666799999999999999999999999999999999999999999987754
Q ss_pred CcceeeeeeEeecCCCCCccchhcccccccccCCCCChhHHHHHHHHHHHHHHHhhcCCccchhhHHHHHHHHHHhhCCC
Q 012237 186 GKLKLKLGGVALGDSWISPEDFVFSWGPLLKDMSRLDTNGFAKSNQIAQKIKQQLEAGEFVGATDSWAQLESVISQNSNA 265 (467)
Q Consensus 186 ~~~~inLkGi~IGNg~i~p~~~~~~~~~~~~~~glid~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 265 (467)
++.+||||||+|||||++|..+..++.+|++.+|+|++.+++.+++.+..+ .. ....+...|.++...+..+.+.
T Consensus 80 ~~~~inLkGi~IGNg~t~~~~~~~~~~~~~~~~gli~~~~~~~~~~~c~~~---~~--~~~~~~~~c~~~~~~~~~~~~~ 154 (319)
T PLN02213 80 CEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGN---YY--NVDPSNTQCLKLTEEYHKCTAK 154 (319)
T ss_pred cCCceeeeEEEeCCCCCCccccchhHhhHHHhcCCCCHHHHHHHHHhcCCC---cc--CCCCCcHHHHHHHHHHHHHHhc
Confidence 356899999999999999999999999999999999998876654432211 10 0112345677766666667778
Q ss_pred cccccccccCCCCCcccccccccccccchhhhhhhcccCCCCCCCCchhhhhccH-HHHHHhccCCC-CccccccChhHh
Q 012237 266 VDFYNFLLDSGMDPVSLTASTLAVGASMRKYSRYLSAHKSSTPDGDGDVGSLMNG-VIKKKLKIIPE-NITWGGQSDSVF 343 (467)
Q Consensus 266 ~n~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~p~~~~~v~~~lN~-~V~~aL~i~~~-~~~w~~cs~~v~ 343 (467)
+|.||++.++|. +...+ ...++ +.....+..|||+ +||++||+.+. ..+|..||..|.
T Consensus 155 ~~~~~~~~~~~~-~~~~~--------~~~c~-----------~~~~~~~~~ylN~~~V~~aL~v~~~~~~~w~~c~~~v~ 214 (319)
T PLN02213 155 INIHHILTPDCD-VTNVT--------SPDCY-----------YYPYHLIECWANDESVREALHIEKGSKGKWARCNRTIP 214 (319)
T ss_pred CCHhhcccCccc-CccCC--------CCCcc-----------cchhHHHHHHhCCHHHHHHhCcCCCCCCCCccCCcccc
Confidence 899999855432 11000 00000 0001357889998 69999998653 468999999886
Q ss_pred hhhcCCCCCccHHHHHHHHhcCceEEEEeccCCcCCCchhHHHHHHHcCcccccccccCCCeeeEeCCCceeeeEEEEEc
Q 012237 344 TELSGDFMRPRISEVDELLAKGVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYK 423 (467)
Q Consensus 344 ~~~~~D~~~~~~~~l~~LL~~~irVLiy~Gd~D~i~n~~g~~~~i~~L~W~g~~~f~~~~~~pw~~~~~~~~~G~~k~~~ 423 (467)
+..|.+.+.. .+..+|.+|+|||||+||.|++||+.|+++|+++|+|+++++| +||+++ ++++||+|+|+
T Consensus 215 --~~~d~~~~~~-~~~~~l~~~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~-----~~w~~~--~~~~G~vk~y~ 284 (319)
T PLN02213 215 --YNHDIVSSIP-YHMNNSISGYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNW-----RPWMIN--NQIAGYTRAYS 284 (319)
T ss_pred --cccccccchH-HHHHHHhcCceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCC-----ccccCC--CEeeeEEEEec
Confidence 5567654333 3334555689999999999999999999999999999998764 699864 57999999998
Q ss_pred C-EEEEEEcCCcccccCCCCcHHHHHHHHHHhcCCC
Q 012237 424 N-LHFYWILGAGHFQVPVDQPCIALNMLAAMTDSPA 458 (467)
Q Consensus 424 n-ltf~~V~~AGHm~vP~dqP~~a~~mi~~fl~~~~ 458 (467)
| |||++|+||||| || +||+++++||++||++.+
T Consensus 285 ~~ltf~~V~~AGHm-V~-~qP~~al~m~~~fi~~~~ 318 (319)
T PLN02213 285 NKMTFATIKAGGHT-AE-YRPNETFIMFQRWISGQP 318 (319)
T ss_pred CcceEEEEcCCCCC-CC-cCHHHHHHHHHHHHcCCC
Confidence 6 999999999999 98 799999999999999875
No 8
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-68 Score=531.21 Aligned_cols=388 Identities=25% Similarity=0.437 Sum_probs=299.8
Q ss_pred CceeeeeEeCCCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhcccccccCCCcccCC------CCCcchhccc
Q 012237 35 SEEWGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLK------PRNSTWLKKA 108 (467)
Q Consensus 35 ~~~sGyv~v~~~~~lFywf~es~~~~~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~l~------~n~~sW~~~a 108 (467)
.+++||.++.. .+|||+||++ ++|.+ +|+||||||||||||+ .|+|+|+||.+++.. .||+||++++
T Consensus 75 ~~~~g~~d~ed--~~ffy~fe~~---ndp~~-rPvi~wlNGGPGcSS~-~g~l~elGP~rI~~~~~P~~~~NP~SW~~~a 147 (498)
T COG2939 75 RDYTGYPDAED--FFFFYTFESP---NDPAN-RPVIFWLNGGPGCSSV-TGLLGELGPKRIQSGTSPSYPDNPGSWLDFA 147 (498)
T ss_pred hhccCCcccce--eEEEEEecCC---CCCCC-CceEEEecCCCChHhh-hhhhhhcCCeeeeCCCCCCCCCCccccccCC
Confidence 45666644433 4999999984 46655 5999999999999999 799999999998643 3999999999
Q ss_pred cceeecCCCccccccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCC--CEEEEecccCcchHHHHHHHHHHHHHcC
Q 012237 109 DLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKS--PLFIVAESYGGKFAATLGLAAVKAIEAG 186 (467)
Q Consensus 109 nvlfiDqPvGtGFSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~--~~yi~GESYgG~yvP~lA~~i~~~~~~~ 186 (467)
||||||||+|||||++. +.....+.+.+.+|++.|++.||+.||++.+. |+||+||||||+|+|.||.+|++++..-
T Consensus 148 dLvFiDqPvGTGfS~a~-~~e~~~d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~ 226 (498)
T COG2939 148 DLVFIDQPVGTGFSRAL-GDEKKKDFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIAL 226 (498)
T ss_pred ceEEEecCcccCccccc-ccccccchhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhcccc
Confidence 99999999999999983 33467788999999999999999999999877 9999999999999999999999986444
Q ss_pred cceeeeeeEeecCC-CCCccchhcccccccccCCCCChh-HHHHHHHHHHHHH-----HHhhcCCccchhhHHHHHHHHH
Q 012237 187 KLKLKLGGVALGDS-WISPEDFVFSWGPLLKDMSRLDTN-GFAKSNQIAQKIK-----QQLEAGEFVGATDSWAQLESVI 259 (467)
Q Consensus 187 ~~~inLkGi~IGNg-~i~p~~~~~~~~~~~~~~glid~~-~~~~~~~~~~~~~-----~~~~~~~~~~a~~~~~~~~~~~ 259 (467)
+-.+||++++|||| +++|..++..|.++++..+..+.. .-++|+++.+.|+ ..++.+........|......+
T Consensus 227 ~~~~nlssvligng~~t~Pl~~~~~y~~~a~~~~~~~~~l~~e~~~~~~~~~~~d~~~~l~~g~~~~~~~~~c~~~~~~~ 306 (498)
T COG2939 227 NGNVNLSSVLIGNGLWTDPLTQYLTYEPIAAEKGPYDGVLSSEECTKAEKYCAGDYCLALMKGCYDSGSLQPCENASAYL 306 (498)
T ss_pred CCceEeeeeeecCCcccChhHHHHHhhhhHhhcCCCCCcCcHHHHHHHHHHhhhhhHhhhccCCCCchhhhHHHHHHHHH
Confidence 55789999999999 999999999999999865554431 1133444433333 2232232112223343322221
Q ss_pred H-------h--hCCCcccccccccCCCCCcccccccccccccchhhhhhhcccCCCCCCCCchhhhhccH-HHHHHhccC
Q 012237 260 S-------Q--NSNAVDFYNFLLDSGMDPVSLTASTLAVGASMRKYSRYLSAHKSSTPDGDGDVGSLMNG-VIKKKLKII 329 (467)
Q Consensus 260 ~-------~--~~~~~n~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~p~~~~~v~~~lN~-~V~~aL~i~ 329 (467)
. . ...+.|.|+++..|.. +.. ...+|.. ...+..++|. .+++.+.
T Consensus 307 ~~~~~~~~~r~~~~~~n~y~~r~~~~d-~g~----------~~~~y~~------------~~~~ld~~~~~~~~~~~~-- 361 (498)
T COG2939 307 TGLMREYVGRAGGRLLNVYDIREECRD-PGL----------GGSCYDT------------LSTSLDYFNFDPEQEVND-- 361 (498)
T ss_pred HhcchhhhccccccccccccchhhcCC-CCc----------ccccccc------------eeeccccccccchhcccc--
Confidence 1 1 1124788888776632 111 1112211 1233445553 4555443
Q ss_pred CCCccccccChhHhhhh---cCCCCCccHHHHHHHHhcCceEEEEeccCCcCCCchhHHHHHHHcCcccccccccCCCee
Q 012237 330 PENITWGGQSDSVFTEL---SGDFMRPRISEVDELLAKGVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTP 406 (467)
Q Consensus 330 ~~~~~w~~cs~~v~~~~---~~D~~~~~~~~l~~LL~~~irVLiy~Gd~D~i~n~~g~~~~i~~L~W~g~~~f~~~~~~p 406 (467)
|....|..|+..+...| .++++.+....+..++.+|+.+++|.||.|.+||+.|++.|..+|+|.+..+|..+...+
T Consensus 362 ~~~d~~~~c~t~a~~~f~~~~~~~~~~~~~~~~~~lv~~~~~~~~~gd~d~icn~~~~~a~~~~Lkw~~~~g~~d~~~~~ 441 (498)
T COG2939 362 PEVDNISGCTTDAMTDFLTFTGGWAKPSRYLVLNLLVNNVWILLYAGDKDFICNLRGNMALDPKLKWLGASGYFDASTPF 441 (498)
T ss_pred ccccchhccchHHHHhhhhhcCCcccccHHHHhhhhhcCCceeeeecCchhHhhhhhhcccCCcceEeeecchhhhcCCC
Confidence 33347999999998776 589999888889999999999999999999999999999999999999999999998888
Q ss_pred eEeCCCceeeeEEEEEcCEEEEEEcCCcccccCCCCcHHHHHHHHHHhcC
Q 012237 407 LFCGNDKITKGFKKSYKNLHFYWILGAGHFQVPVDQPCIALNMLAAMTDS 456 (467)
Q Consensus 407 w~~~~~~~~~G~~k~~~nltf~~V~~AGHm~vP~dqP~~a~~mi~~fl~~ 456 (467)
|......+..|-+++++|++|+.++.|||| ||.|+|+.+++|++.|+.+
T Consensus 442 ~~~~~t~e~~~~~~s~~n~~~~r~y~aGHM-vp~d~P~~~~~~~~~~~~~ 490 (498)
T COG2939 442 FWSRLTLEEMGGYKSYRNLTFLRIYEAGHM-VPYDRPESSLEMVNLWING 490 (498)
T ss_pred cccccchhhcccccccCCceEEEEecCcce-eecCChHHHHHHHHHHHhh
Confidence 876445567888899999999999999999 9999999999999999987
No 9
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.33 E-value=5.4e-11 Score=112.82 Aligned_cols=104 Identities=21% Similarity=0.229 Sum_probs=73.9
Q ss_pred CCEEEEEcCCCChhhhhcccccccCCCcccCCCCCcchhccccceeecCCCccccccccCCCCcccChHHHHHHHHHHHH
Q 012237 67 WPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLM 146 (467)
Q Consensus 67 ~PlilWlnGGPG~SS~~~g~f~E~GP~~~~l~~n~~sW~~~anvlfiDqPvGtGFSy~~~~~~~~~~~~~~a~d~~~fL~ 146 (467)
.|+||+++|.+|.+.++ ..+. .-+.+..+++-+|.| |.|.|..... ...+.++.++++.++++
T Consensus 13 ~~~iv~lhG~~~~~~~~-~~~~-------------~~l~~~~~vi~~D~~-G~G~S~~~~~--~~~~~~~~~~~~~~~i~ 75 (257)
T TIGR03611 13 APVVVLSSGLGGSGSYW-APQL-------------DVLTQRFHVVTYDHR-GTGRSPGELP--PGYSIAHMADDVLQLLD 75 (257)
T ss_pred CCEEEEEcCCCcchhHH-HHHH-------------HHHHhccEEEEEcCC-CCCCCCCCCc--ccCCHHHHHHHHHHHHH
Confidence 59999999998877663 2111 123456899999999 9999965322 23466777777777775
Q ss_pred HHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCCCCC
Q 012237 147 ELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWIS 203 (467)
Q Consensus 147 ~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg~i~ 203 (467)
.. ...+++|+|+|+||..+..+|.+..+ .++++++-+++..
T Consensus 76 ~~-------~~~~~~l~G~S~Gg~~a~~~a~~~~~---------~v~~~i~~~~~~~ 116 (257)
T TIGR03611 76 AL-------NIERFHFVGHALGGLIGLQLALRYPE---------RLLSLVLINAWSR 116 (257)
T ss_pred Hh-------CCCcEEEEEechhHHHHHHHHHHChH---------HhHHheeecCCCC
Confidence 32 34679999999999888888765322 4788888776654
No 10
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.28 E-value=3.5e-10 Score=108.88 Aligned_cols=128 Identities=22% Similarity=0.283 Sum_probs=82.0
Q ss_pred eeeeeEeCCCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhcccccccCCCcccCCCCCcchh--ccccceeec
Q 012237 37 EWGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWL--KKADLLFVD 114 (467)
Q Consensus 37 ~sGyv~v~~~~~lFywf~es~~~~~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~l~~n~~sW~--~~anvlfiD 114 (467)
.+++++++.. .+.|.-+. .+.+ .|.||+++||||+++.....+. ... +..+++-+|
T Consensus 3 ~~~~~~~~~~-~~~~~~~~------~~~~-~~~vl~~hG~~g~~~~~~~~~~--------------~~l~~~g~~vi~~d 60 (288)
T TIGR01250 3 IEGIITVDGG-YHLFTKTG------GEGE-KIKLLLLHGGPGMSHEYLENLR--------------ELLKEEGREVIMYD 60 (288)
T ss_pred ccceecCCCC-eEEEEecc------CCCC-CCeEEEEcCCCCccHHHHHHHH--------------HHHHhcCCEEEEEc
Confidence 4567777643 44443332 1212 3788999999999875322221 111 248899999
Q ss_pred CCCccccccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeee
Q 012237 115 NPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGG 194 (467)
Q Consensus 115 qPvGtGFSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkG 194 (467)
.| |.|.|..........+.++.++++..+++. +..++++|.|+|+||..+..+|.+- +..+++
T Consensus 61 ~~-G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~liG~S~Gg~ia~~~a~~~---------p~~v~~ 123 (288)
T TIGR01250 61 QL-GCGYSDQPDDSDELWTIDYFVDELEEVREK-------LGLDKFYLLGHSWGGMLAQEYALKY---------GQHLKG 123 (288)
T ss_pred CC-CCCCCCCCCcccccccHHHHHHHHHHHHHH-------cCCCcEEEEEeehHHHHHHHHHHhC---------ccccce
Confidence 99 999986432211124567777777665543 3345799999999998888877542 226889
Q ss_pred EeecCCCCC
Q 012237 195 VALGDSWIS 203 (467)
Q Consensus 195 i~IGNg~i~ 203 (467)
+++.++...
T Consensus 124 lvl~~~~~~ 132 (288)
T TIGR01250 124 LIISSMLDS 132 (288)
T ss_pred eeEeccccc
Confidence 998776553
No 11
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.19 E-value=2.8e-09 Score=104.36 Aligned_cols=124 Identities=15% Similarity=0.154 Sum_probs=84.8
Q ss_pred eeeeEeCCCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhcccccccCCCcccCCCCCcchhccccceeecCCC
Q 012237 38 WGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPV 117 (467)
Q Consensus 38 sGyv~v~~~~~lFywf~es~~~~~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~l~~n~~sW~~~anvlfiDqPv 117 (467)
+=|+++++ .+++|.- . +++ . |.||.|+|.++.|.++ ..+. -.+.+..+++.+|.|
T Consensus 10 ~~~~~~~~-~~i~y~~--~----G~~--~-~~vlllHG~~~~~~~w-~~~~-------------~~L~~~~~vi~~Dlp- 64 (294)
T PLN02824 10 TRTWRWKG-YNIRYQR--A----GTS--G-PALVLVHGFGGNADHW-RKNT-------------PVLAKSHRVYAIDLL- 64 (294)
T ss_pred CceEEEcC-eEEEEEE--c----CCC--C-CeEEEECCCCCChhHH-HHHH-------------HHHHhCCeEEEEcCC-
Confidence 34777754 3565422 1 222 2 7899999999988874 3222 134566799999999
Q ss_pred ccccccccCCC----CcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeee
Q 012237 118 GTGYSYVEDNS----SFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLG 193 (467)
Q Consensus 118 GtGFSy~~~~~----~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLk 193 (467)
|.|.|...+.. ....+.++.|+++.++|+.. ...+++|.|+|.||..+-.+|.+-.+ .++
T Consensus 65 G~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l-------~~~~~~lvGhS~Gg~va~~~a~~~p~---------~v~ 128 (294)
T PLN02824 65 GYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDV-------VGDPAFVICNSVGGVVGLQAAVDAPE---------LVR 128 (294)
T ss_pred CCCCCCCCccccccccccCCHHHHHHHHHHHHHHh-------cCCCeEEEEeCHHHHHHHHHHHhChh---------hee
Confidence 99999754321 12346678888888888744 34789999999999887777754322 589
Q ss_pred eEeecCCCC
Q 012237 194 GVALGDSWI 202 (467)
Q Consensus 194 Gi~IGNg~i 202 (467)
++++-|+..
T Consensus 129 ~lili~~~~ 137 (294)
T PLN02824 129 GVMLINISL 137 (294)
T ss_pred EEEEECCCc
Confidence 999977654
No 12
>PHA02857 monoglyceride lipase; Provisional
Probab=99.08 E-value=7.1e-09 Score=100.45 Aligned_cols=126 Identities=13% Similarity=0.145 Sum_probs=83.0
Q ss_pred eCCCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhcccccccCCCcccCCCCCcchhc-cccceeecCCCcccc
Q 012237 43 VRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLK-KADLLFVDNPVGTGY 121 (467)
Q Consensus 43 v~~~~~lFywf~es~~~~~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~l~~n~~sW~~-~anvlfiDqPvGtGF 121 (467)
-.++..|+|..|+.. .+| +|+||.++|.+++|.++ -.+ --.+.+ -.+++-+|.| |.|.
T Consensus 7 ~~~g~~l~~~~~~~~---~~~---~~~v~llHG~~~~~~~~-~~~-------------~~~l~~~g~~via~D~~-G~G~ 65 (276)
T PHA02857 7 NLDNDYIYCKYWKPI---TYP---KALVFISHGAGEHSGRY-EEL-------------AENISSLGILVFSHDHI-GHGR 65 (276)
T ss_pred cCCCCEEEEEeccCC---CCC---CEEEEEeCCCccccchH-HHH-------------HHHHHhCCCEEEEccCC-CCCC
Confidence 345568999888742 122 48999999997777663 211 123544 3789999999 9999
Q ss_pred ccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCCC
Q 012237 122 SYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSW 201 (467)
Q Consensus 122 Sy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg~ 201 (467)
|.... ....+-.+..+|+..++..+-+.+ ...+++|+|+|.||..+..+|.+- +-+++|+++.+|.
T Consensus 66 S~~~~--~~~~~~~~~~~d~~~~l~~~~~~~---~~~~~~lvG~S~GG~ia~~~a~~~---------p~~i~~lil~~p~ 131 (276)
T PHA02857 66 SNGEK--MMIDDFGVYVRDVVQHVVTIKSTY---PGVPVFLLGHSMGATISILAAYKN---------PNLFTAMILMSPL 131 (276)
T ss_pred CCCcc--CCcCCHHHHHHHHHHHHHHHHhhC---CCCCEEEEEcCchHHHHHHHHHhC---------ccccceEEEeccc
Confidence 96432 112344455677777776554433 357899999999997666665431 1258999998876
Q ss_pred CC
Q 012237 202 IS 203 (467)
Q Consensus 202 i~ 203 (467)
+.
T Consensus 132 ~~ 133 (276)
T PHA02857 132 VN 133 (276)
T ss_pred cc
Confidence 54
No 13
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.07 E-value=2.2e-09 Score=102.46 Aligned_cols=98 Identities=24% Similarity=0.225 Sum_probs=72.6
Q ss_pred CCEEEEEcCCCChhhhhcccccccCCCcccCCCCCcchhccccceeecCCCccccccccCCCCcccChHHHHHHHHHHHH
Q 012237 67 WPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLM 146 (467)
Q Consensus 67 ~PlilWlnGGPG~SS~~~g~f~E~GP~~~~l~~n~~sW~~~anvlfiDqPvGtGFSy~~~~~~~~~~~~~~a~d~~~fL~ 146 (467)
.|.||+++|.+|.+.++ ..+. -.+.+..+++.+|.| |.|.|.... ..+-++.++|+.++|.
T Consensus 16 ~~~iv~lhG~~~~~~~~-~~~~-------------~~l~~~~~vi~~D~~-G~G~s~~~~----~~~~~~~~~d~~~~l~ 76 (255)
T PRK10673 16 NSPIVLVHGLFGSLDNL-GVLA-------------RDLVNDHDIIQVDMR-NHGLSPRDP----VMNYPAMAQDLLDTLD 76 (255)
T ss_pred CCCEEEECCCCCchhHH-HHHH-------------HHHhhCCeEEEECCC-CCCCCCCCC----CCCHHHHHHHHHHHHH
Confidence 49999999999888763 3221 123456899999999 999886432 2466788889998887
Q ss_pred HHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecC
Q 012237 147 ELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGD 199 (467)
Q Consensus 147 ~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGN 199 (467)
.+ ...+++|.|+|.||..+..+|.+..+ .++++++.+
T Consensus 77 ~l-------~~~~~~lvGhS~Gg~va~~~a~~~~~---------~v~~lvli~ 113 (255)
T PRK10673 77 AL-------QIEKATFIGHSMGGKAVMALTALAPD---------RIDKLVAID 113 (255)
T ss_pred Hc-------CCCceEEEEECHHHHHHHHHHHhCHh---------hcceEEEEe
Confidence 53 34679999999999988888765322 588888865
No 14
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.06 E-value=7.5e-09 Score=99.73 Aligned_cols=105 Identities=21% Similarity=0.221 Sum_probs=72.8
Q ss_pred CCEEEEEcCCCChhhhhcccccccCCCcccCCCCCcchhccccceeecCCCccccccccCCCCcccChHHHHHHHHHHHH
Q 012237 67 WPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLM 146 (467)
Q Consensus 67 ~PlilWlnGGPG~SS~~~g~f~E~GP~~~~l~~n~~sW~~~anvlfiDqPvGtGFSy~~~~~~~~~~~~~~a~d~~~fL~ 146 (467)
.|.||+++|.+|.+..+ ..+. ....+..+++.+|.| |.|.|..... ...+-+..++++.++++
T Consensus 28 ~~~vv~~hG~~~~~~~~-~~~~-------------~~l~~~~~vi~~D~~-G~G~S~~~~~--~~~~~~~~~~~l~~~i~ 90 (278)
T TIGR03056 28 GPLLLLLHGTGASTHSW-RDLM-------------PPLARSFRVVAPDLP-GHGFTRAPFR--FRFTLPSMAEDLSALCA 90 (278)
T ss_pred CCeEEEEcCCCCCHHHH-HHHH-------------HHHhhCcEEEeecCC-CCCCCCCccc--cCCCHHHHHHHHHHHHH
Confidence 38999999998877653 2211 012334799999999 9999865332 13466777888877775
Q ss_pred HHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCCCCCc
Q 012237 147 ELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISP 204 (467)
Q Consensus 147 ~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg~i~p 204 (467)
. +..++++|+|+|+||..+..+|.+. +-.++++++.++..++
T Consensus 91 ~-------~~~~~~~lvG~S~Gg~~a~~~a~~~---------p~~v~~~v~~~~~~~~ 132 (278)
T TIGR03056 91 A-------EGLSPDGVIGHSAGAAIALRLALDG---------PVTPRMVVGINAALMP 132 (278)
T ss_pred H-------cCCCCceEEEECccHHHHHHHHHhC---------CcccceEEEEcCcccc
Confidence 3 2346899999999998777666432 2257899998886654
No 15
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.05 E-value=9.9e-09 Score=100.31 Aligned_cols=123 Identities=18% Similarity=0.241 Sum_probs=75.6
Q ss_pred ceeeeeEeCCCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhcccccccCCCcccCCCCCcchhccccceeecC
Q 012237 36 EEWGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDN 115 (467)
Q Consensus 36 ~~sGyv~v~~~~~lFywf~es~~~~~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~l~~n~~sW~~~anvlfiDq 115 (467)
..+.++++++ ..++|- +. + + .|.||.|+|.|..+.++ -.+ --.+.+..+++-+|.
T Consensus 14 ~~~~~~~~~~-~~i~y~--~~----G---~-~~~iv~lHG~~~~~~~~-~~~-------------~~~l~~~~~vi~~D~ 68 (286)
T PRK03204 14 FESRWFDSSR-GRIHYI--DE----G---T-GPPILLCHGNPTWSFLY-RDI-------------IVALRDRFRCVAPDY 68 (286)
T ss_pred ccceEEEcCC-cEEEEE--EC----C---C-CCEEEEECCCCccHHHH-HHH-------------HHHHhCCcEEEEECC
Confidence 3457888864 356542 21 1 1 26788899998554442 111 012345689999999
Q ss_pred CCccccccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeE
Q 012237 116 PVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGV 195 (467)
Q Consensus 116 PvGtGFSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi 195 (467)
| |.|.|.... ....+.++.++++..+++. +...+++|.|+|+||..+-.+|.+- +-.++++
T Consensus 69 ~-G~G~S~~~~--~~~~~~~~~~~~~~~~~~~-------~~~~~~~lvG~S~Gg~va~~~a~~~---------p~~v~~l 129 (286)
T PRK03204 69 L-GFGLSERPS--GFGYQIDEHARVIGEFVDH-------LGLDRYLSMGQDWGGPISMAVAVER---------ADRVRGV 129 (286)
T ss_pred C-CCCCCCCCC--ccccCHHHHHHHHHHHHHH-------hCCCCEEEEEECccHHHHHHHHHhC---------hhheeEE
Confidence 9 999985322 1223455666666555543 2346899999999996555544321 1268999
Q ss_pred eecCCCC
Q 012237 196 ALGDSWI 202 (467)
Q Consensus 196 ~IGNg~i 202 (467)
++.++..
T Consensus 130 vl~~~~~ 136 (286)
T PRK03204 130 VLGNTWF 136 (286)
T ss_pred EEECccc
Confidence 9977643
No 16
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.04 E-value=2.2e-08 Score=98.46 Aligned_cols=132 Identities=16% Similarity=0.154 Sum_probs=85.3
Q ss_pred CCCCCCCceeeeeEeCCC----ceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhcccccccCCCcccCCCCCcch
Q 012237 29 NKNQDASEEWGYVEVRPK----AHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTW 104 (467)
Q Consensus 29 ~~~~~~~~~sGyv~v~~~----~~lFywf~es~~~~~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~l~~n~~sW 104 (467)
..+++.+..-.|+.+++. .+++|.-. ++| + .|.||.++|.|+.+.++ ..+. | ..
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~i~y~~~------G~~-~-~~~lvliHG~~~~~~~w-~~~~---~----------~L 69 (302)
T PRK00870 12 ENLPDYPFAPHYVDVDDGDGGPLRMHYVDE------GPA-D-GPPVLLLHGEPSWSYLY-RKMI---P----------IL 69 (302)
T ss_pred cCCcCCCCCceeEeecCCCCceEEEEEEec------CCC-C-CCEEEEECCCCCchhhH-HHHH---H----------HH
Confidence 456666665579999752 35665432 344 2 37899999998777663 2211 0 12
Q ss_pred h-ccccceeecCCCccccccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHH
Q 012237 105 L-KKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAI 183 (467)
Q Consensus 105 ~-~~anvlfiDqPvGtGFSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~ 183 (467)
. +..+|+.+|.| |.|.|..... ....+.++.++++.++|+. +...+++|.|+|+||..+-.+|.+-.+
T Consensus 70 ~~~gy~vi~~Dl~-G~G~S~~~~~-~~~~~~~~~a~~l~~~l~~-------l~~~~v~lvGhS~Gg~ia~~~a~~~p~-- 138 (302)
T PRK00870 70 AAAGHRVIAPDLI-GFGRSDKPTR-REDYTYARHVEWMRSWFEQ-------LDLTDVTLVCQDWGGLIGLRLAAEHPD-- 138 (302)
T ss_pred HhCCCEEEEECCC-CCCCCCCCCC-cccCCHHHHHHHHHHHHHH-------cCCCCEEEEEEChHHHHHHHHHHhChh--
Confidence 2 24899999999 9999843211 1123556677776666652 334689999999999888777754222
Q ss_pred HcCcceeeeeeEeecCC
Q 012237 184 EAGKLKLKLGGVALGDS 200 (467)
Q Consensus 184 ~~~~~~inLkGi~IGNg 200 (467)
.++++++-++
T Consensus 139 -------~v~~lvl~~~ 148 (302)
T PRK00870 139 -------RFARLVVANT 148 (302)
T ss_pred -------heeEEEEeCC
Confidence 5888888654
No 17
>PRK06489 hypothetical protein; Provisional
Probab=99.02 E-value=1.1e-07 Score=96.16 Aligned_cols=112 Identities=21% Similarity=0.137 Sum_probs=65.5
Q ss_pred CCEEEEEcCCCChhhhhcc-cccccCCCcccC-CCCCcchhccccceeecCCCccccccccCCCC----cccChHHHHHH
Q 012237 67 WPIILWLQGGPGASGVGIG-NFEEVGPFDTYL-KPRNSTWLKKADLLFVDNPVGTGYSYVEDNSS----FVKNDVEAAND 140 (467)
Q Consensus 67 ~PlilWlnGGPG~SS~~~g-~f~E~GP~~~~l-~~n~~sW~~~anvlfiDqPvGtGFSy~~~~~~----~~~~~~~~a~d 140 (467)
.|.||.|+|++|.+..+.. .+.+ .+ .....--.+..+||.+|.| |.|.|....... ...+.++.+++
T Consensus 69 gpplvllHG~~~~~~~~~~~~~~~------~l~~~~~~l~~~~~~Via~Dl~-GhG~S~~p~~~~~~~~~~~~~~~~a~~ 141 (360)
T PRK06489 69 DNAVLVLHGTGGSGKSFLSPTFAG------ELFGPGQPLDASKYFIILPDGI-GHGKSSKPSDGLRAAFPRYDYDDMVEA 141 (360)
T ss_pred CCeEEEeCCCCCchhhhccchhHH------HhcCCCCcccccCCEEEEeCCC-CCCCCCCCCcCCCCCCCcccHHHHHHH
Confidence 3889999999987655210 0000 00 0000001356899999999 999996432110 02345666666
Q ss_pred HHHHHHHHHHhCcccCCCCE-EEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCC
Q 012237 141 LTTLLMELFNKNEILQKSPL-FIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDS 200 (467)
Q Consensus 141 ~~~fL~~f~~~fp~~~~~~~-yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg 200 (467)
+..++.+- +.-.++ +|.|+|+||..+-.+|.+-.+ .++++++-++
T Consensus 142 ~~~~l~~~------lgi~~~~~lvG~SmGG~vAl~~A~~~P~---------~V~~LVLi~s 187 (360)
T PRK06489 142 QYRLVTEG------LGVKHLRLILGTSMGGMHAWMWGEKYPD---------FMDALMPMAS 187 (360)
T ss_pred HHHHHHHh------cCCCceeEEEEECHHHHHHHHHHHhCch---------hhheeeeecc
Confidence 66654321 222456 489999999877777755332 5788887554
No 18
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.00 E-value=9.9e-08 Score=95.14 Aligned_cols=135 Identities=19% Similarity=0.197 Sum_probs=87.9
Q ss_pred eeeeeEeCCCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhcccccccCCCcccCCCCC--cchhc-cccceee
Q 012237 37 EWGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRN--STWLK-KADLLFV 113 (467)
Q Consensus 37 ~sGyv~v~~~~~lFywf~es~~~~~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~l~~n~--~sW~~-~anvlfi 113 (467)
..+++...++..++|+.+.-. .. ...+|+||+++|..+.++ +. + .. ..+++ -.+|+-+
T Consensus 33 ~~~~~~~~dg~~l~~~~~~~~---~~-~~~~~~VvllHG~~~~~~-~~--~------------~~~~~~L~~~Gy~V~~~ 93 (330)
T PLN02298 33 SKSFFTSPRGLSLFTRSWLPS---SS-SPPRALIFMVHGYGNDIS-WT--F------------QSTAIFLAQMGFACFAL 93 (330)
T ss_pred ccceEEcCCCCEEEEEEEecC---CC-CCCceEEEEEcCCCCCcc-ee--h------------hHHHHHHHhCCCEEEEe
Confidence 457777767778988766421 11 122489999999854332 11 0 11 12444 4899999
Q ss_pred cCCCccccccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeee
Q 012237 114 DNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLG 193 (467)
Q Consensus 114 DqPvGtGFSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLk 193 (467)
|+| |.|.|.... ....+.+..++|+..+++..-. ..++...+++|+|+|.||..+..++.+- +-.++
T Consensus 94 D~r-GhG~S~~~~--~~~~~~~~~~~D~~~~i~~l~~-~~~~~~~~i~l~GhSmGG~ia~~~a~~~---------p~~v~ 160 (330)
T PLN02298 94 DLE-GHGRSEGLR--AYVPNVDLVVEDCLSFFNSVKQ-REEFQGLPRFLYGESMGGAICLLIHLAN---------PEGFD 160 (330)
T ss_pred cCC-CCCCCCCcc--ccCCCHHHHHHHHHHHHHHHHh-cccCCCCCEEEEEecchhHHHHHHHhcC---------cccce
Confidence 999 999985321 2234667888999888875443 2233456899999999998776555321 11589
Q ss_pred eEeecCCCCC
Q 012237 194 GVALGDSWIS 203 (467)
Q Consensus 194 Gi~IGNg~i~ 203 (467)
|+++.+++..
T Consensus 161 ~lvl~~~~~~ 170 (330)
T PLN02298 161 GAVLVAPMCK 170 (330)
T ss_pred eEEEeccccc
Confidence 9999777654
No 19
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=98.93 E-value=2.8e-07 Score=89.33 Aligned_cols=61 Identities=8% Similarity=0.045 Sum_probs=51.6
Q ss_pred cCceEEEEeccCCcCCCchhHHHHHHHcCcccccccccCCCeeeEeCCCceeeeEEEEEcCEEEEEEcCCcccccCCCCc
Q 012237 364 KGVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFQVPVDQP 443 (467)
Q Consensus 364 ~~irVLiy~Gd~D~i~n~~g~~~~i~~L~W~g~~~f~~~~~~pw~~~~~~~~~G~~k~~~nltf~~V~~AGHm~vP~dqP 443 (467)
-.++||++.|..|.++|...++++.+.++ +..+++|.+|||+ ++.++|
T Consensus 222 i~~Pvlli~G~~D~~v~~~~~~~~~~~~~-------------------------------~~~~~~i~~agH~-~~~e~p 269 (282)
T TIGR03343 222 IKAKTLVTWGRDDRFVPLDHGLKLLWNMP-------------------------------DAQLHVFSRCGHW-AQWEHA 269 (282)
T ss_pred CCCCEEEEEccCCCcCCchhHHHHHHhCC-------------------------------CCEEEEeCCCCcC-CcccCH
Confidence 36899999999999999776666665554 4566789999999 999999
Q ss_pred HHHHHHHHHHhcC
Q 012237 444 CIALNMLAAMTDS 456 (467)
Q Consensus 444 ~~a~~mi~~fl~~ 456 (467)
+...++|..||+.
T Consensus 270 ~~~~~~i~~fl~~ 282 (282)
T TIGR03343 270 DAFNRLVIDFLRN 282 (282)
T ss_pred HHHHHHHHHHhhC
Confidence 9999999999863
No 20
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=98.92 E-value=1e-07 Score=96.34 Aligned_cols=102 Identities=17% Similarity=0.113 Sum_probs=69.0
Q ss_pred CEEEEEcCCCChhhhhcccccccCCCcccCCCCCcchhccccceeecCCCccccccccCCCCcccChHHHHHHHHHHHHH
Q 012237 68 PIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLME 147 (467)
Q Consensus 68 PlilWlnGGPG~SS~~~g~f~E~GP~~~~l~~n~~sW~~~anvlfiDqPvGtGFSy~~~~~~~~~~~~~~a~d~~~fL~~ 147 (467)
|.||.|+|.|+.+.++ ..+. -...+..+++-+|.| |.|.|..... ...+.++.++++.++|+.
T Consensus 89 p~lvllHG~~~~~~~w-~~~~-------------~~L~~~~~via~Dl~-G~G~S~~~~~--~~~~~~~~a~~l~~~l~~ 151 (360)
T PLN02679 89 PPVLLVHGFGASIPHW-RRNI-------------GVLAKNYTVYAIDLL-GFGASDKPPG--FSYTMETWAELILDFLEE 151 (360)
T ss_pred CeEEEECCCCCCHHHH-HHHH-------------HHHhcCCEEEEECCC-CCCCCCCCCC--ccccHHHHHHHHHHHHHH
Confidence 7789999999887774 2111 123446799999999 9999854321 234567778888877764
Q ss_pred HHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCCC
Q 012237 148 LFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSW 201 (467)
Q Consensus 148 f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg~ 201 (467)
. ...+++|.|+|+||..+-.+|..-. +-.++|+++-|+.
T Consensus 152 l-------~~~~~~lvGhS~Gg~ia~~~a~~~~--------P~rV~~LVLi~~~ 190 (360)
T PLN02679 152 V-------VQKPTVLIGNSVGSLACVIAASEST--------RDLVRGLVLLNCA 190 (360)
T ss_pred h-------cCCCeEEEEECHHHHHHHHHHHhcC--------hhhcCEEEEECCc
Confidence 2 3468999999999966555443210 1158899987754
No 21
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=98.91 E-value=1.5e-07 Score=94.68 Aligned_cols=128 Identities=15% Similarity=0.193 Sum_probs=82.3
Q ss_pred CCCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhcccccccCCCcccCCCCCcchhc-cccceeecCCCccccc
Q 012237 44 RPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLK-KADLLFVDNPVGTGYS 122 (467)
Q Consensus 44 ~~~~~lFywf~es~~~~~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~l~~n~~sW~~-~anvlfiDqPvGtGFS 122 (467)
.++..+|+..+.-+ ++ +.+|+||.++|..+.++...-.+ -..+.+ -.+|+-+|.| |.|.|
T Consensus 69 ~~g~~l~~~~~~p~---~~--~~~~~iv~lHG~~~~~~~~~~~~-------------~~~l~~~g~~v~~~D~~-G~G~S 129 (349)
T PLN02385 69 SRGVEIFSKSWLPE---NS--RPKAAVCFCHGYGDTCTFFFEGI-------------ARKIASSGYGVFAMDYP-GFGLS 129 (349)
T ss_pred CCCCEEEEEEEecC---CC--CCCeEEEEECCCCCccchHHHHH-------------HHHHHhCCCEEEEecCC-CCCCC
Confidence 34567888776521 11 22489999999866554311000 113444 4899999999 99999
Q ss_pred cccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCCCC
Q 012237 123 YVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWI 202 (467)
Q Consensus 123 y~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg~i 202 (467)
.... ....+-++.++|+.++++.. ...+++...+++|+|+|+||..+..+|.+- +-.++|+++-+|..
T Consensus 130 ~~~~--~~~~~~~~~~~dv~~~l~~l-~~~~~~~~~~~~LvGhSmGG~val~~a~~~---------p~~v~glVLi~p~~ 197 (349)
T PLN02385 130 EGLH--GYIPSFDDLVDDVIEHYSKI-KGNPEFRGLPSFLFGQSMGGAVALKVHLKQ---------PNAWDGAILVAPMC 197 (349)
T ss_pred CCCC--CCcCCHHHHHHHHHHHHHHH-HhccccCCCCEEEEEeccchHHHHHHHHhC---------cchhhheeEecccc
Confidence 6432 22346677788888887653 333455566899999999997766665431 11589999977654
No 22
>PRK10349 carboxylesterase BioH; Provisional
Probab=98.91 E-value=2.4e-08 Score=95.68 Aligned_cols=94 Identities=18% Similarity=0.134 Sum_probs=65.1
Q ss_pred CEEEEEcCCCChhhhhcccccccCCCcccCCCCCcchhccccceeecCCCccccccccCCCCcccChHHHHHHHHHHHHH
Q 012237 68 PIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLME 147 (467)
Q Consensus 68 PlilWlnGGPG~SS~~~g~f~E~GP~~~~l~~n~~sW~~~anvlfiDqPvGtGFSy~~~~~~~~~~~~~~a~d~~~fL~~ 147 (467)
|.||.|+|.++++..+ -.+ -..+.+..+++.+|.| |.|.|...+ ..+.++.++++.+
T Consensus 14 ~~ivllHG~~~~~~~w-~~~-------------~~~L~~~~~vi~~Dl~-G~G~S~~~~----~~~~~~~~~~l~~---- 70 (256)
T PRK10349 14 VHLVLLHGWGLNAEVW-RCI-------------DEELSSHFTLHLVDLP-GFGRSRGFG----ALSLADMAEAVLQ---- 70 (256)
T ss_pred CeEEEECCCCCChhHH-HHH-------------HHHHhcCCEEEEecCC-CCCCCCCCC----CCCHHHHHHHHHh----
Confidence 5699999988888774 111 1235577999999999 999996421 2345555655432
Q ss_pred HHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCC
Q 012237 148 LFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDS 200 (467)
Q Consensus 148 f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg 200 (467)
+...+++|.|+|+||..+..+|.+-.+ .++++++-|+
T Consensus 71 -------~~~~~~~lvGhS~Gg~ia~~~a~~~p~---------~v~~lili~~ 107 (256)
T PRK10349 71 -------QAPDKAIWLGWSLGGLVASQIALTHPE---------RVQALVTVAS 107 (256)
T ss_pred -------cCCCCeEEEEECHHHHHHHHHHHhChH---------hhheEEEecC
Confidence 123689999999999888777754222 5788888665
No 23
>PLN02578 hydrolase
Probab=98.91 E-value=2.5e-07 Score=93.27 Aligned_cols=100 Identities=21% Similarity=0.162 Sum_probs=68.3
Q ss_pred CEEEEEcCCCChhhhhcccccccCCCcccCCCCCcchhccccceeecCCCccccccccCCCCcccChHHHHHHHHHHHHH
Q 012237 68 PIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLME 147 (467)
Q Consensus 68 PlilWlnGGPG~SS~~~g~f~E~GP~~~~l~~n~~sW~~~anvlfiDqPvGtGFSy~~~~~~~~~~~~~~a~d~~~fL~~ 147 (467)
|-||.++|-++.+..+ .... -.+.+..+++.+|.| |.|.|.... ...+.+..++++.+|++.
T Consensus 87 ~~vvliHG~~~~~~~w-~~~~-------------~~l~~~~~v~~~D~~-G~G~S~~~~---~~~~~~~~a~~l~~~i~~ 148 (354)
T PLN02578 87 LPIVLIHGFGASAFHW-RYNI-------------PELAKKYKVYALDLL-GFGWSDKAL---IEYDAMVWRDQVADFVKE 148 (354)
T ss_pred CeEEEECCCCCCHHHH-HHHH-------------HHHhcCCEEEEECCC-CCCCCCCcc---cccCHHHHHHHHHHHHHH
Confidence 4468999876655442 1111 123456899999999 999885432 123566667788887775
Q ss_pred HHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCCC
Q 012237 148 LFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSW 201 (467)
Q Consensus 148 f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg~ 201 (467)
. ...+++|.|+|+||..+..+|.+-.+ .++++++.|+.
T Consensus 149 ~-------~~~~~~lvG~S~Gg~ia~~~A~~~p~---------~v~~lvLv~~~ 186 (354)
T PLN02578 149 V-------VKEPAVLVGNSLGGFTALSTAVGYPE---------LVAGVALLNSA 186 (354)
T ss_pred h-------ccCCeEEEEECHHHHHHHHHHHhChH---------hcceEEEECCC
Confidence 4 24789999999999877777765432 68999887653
No 24
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=98.90 E-value=2.2e-07 Score=95.26 Aligned_cols=149 Identities=14% Similarity=0.110 Sum_probs=88.4
Q ss_pred hhhcCcccccccCCCCCCCceeeeeEeCCC--ceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhcccccccCCCc
Q 012237 17 LLFNGGAAARALNKNQDASEEWGYVEVRPK--AHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFD 94 (467)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~sGyv~v~~~--~~lFywf~es~~~~~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~ 94 (467)
++...-.++.+.++..+.....+++.-.++ ..+....++. + .+.|.||.|+|.++.+..+. -
T Consensus 60 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~--~~~p~vvllHG~~~~~~~~~-~-------- 123 (402)
T PLN02894 60 LVKTPYVQEQVNIGSGPPGSKVRWFRSASNEPRFINTVTFDS-----K--EDAPTLVMVHGYGASQGFFF-R-------- 123 (402)
T ss_pred HhcccceeeeEeeCCCCCcccccceecccCcCCeEEEEEecC-----C--CCCCEEEEECCCCcchhHHH-H--------
Confidence 444444455566554444444555544332 2454444432 1 23499999999987665521 1
Q ss_pred ccCCCCCcchhccccceeecCCCccccccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHH
Q 012237 95 TYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAAT 174 (467)
Q Consensus 95 ~~l~~n~~sW~~~anvlfiDqPvGtGFSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~ 174 (467)
+-..+.+..+|+-+|.| |.|.|.... ....+.+++.+.+.+.+..|.+.. ...+++|.|+|+||..+-.
T Consensus 124 -----~~~~L~~~~~vi~~D~r-G~G~S~~~~--~~~~~~~~~~~~~~~~i~~~~~~l---~~~~~~lvGhS~GG~la~~ 192 (402)
T PLN02894 124 -----NFDALASRFRVIAIDQL-GWGGSSRPD--FTCKSTEETEAWFIDSFEEWRKAK---NLSNFILLGHSFGGYVAAK 192 (402)
T ss_pred -----HHHHHHhCCEEEEECCC-CCCCCCCCC--cccccHHHHHHHHHHHHHHHHHHc---CCCCeEEEEECHHHHHHHH
Confidence 11224456899999999 999884321 112233445555566666666532 3458999999999977776
Q ss_pred HHHHHHHHHHcCcceeeeeeEeecCCC
Q 012237 175 LGLAAVKAIEAGKLKLKLGGVALGDSW 201 (467)
Q Consensus 175 lA~~i~~~~~~~~~~inLkGi~IGNg~ 201 (467)
+|.+-. -.++++++.++.
T Consensus 193 ~a~~~p---------~~v~~lvl~~p~ 210 (402)
T PLN02894 193 YALKHP---------EHVQHLILVGPA 210 (402)
T ss_pred HHHhCc---------hhhcEEEEECCc
Confidence 665422 258888887664
No 25
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=98.90 E-value=3.1e-08 Score=96.10 Aligned_cols=121 Identities=14% Similarity=0.085 Sum_probs=78.0
Q ss_pred eEeCCCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhcccccccCCCcccCCCCCcchhccccceeecCCCccc
Q 012237 41 VEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTG 120 (467)
Q Consensus 41 v~v~~~~~lFywf~es~~~~~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~l~~n~~sW~~~anvlfiDqPvGtG 120 (467)
+++++ ..+.||..+. .+ . .|.||+++|-++.+..+ ..+.+ -..+..+++-+|.| |.|
T Consensus 7 ~~~~~-~~~~~~~~~~-----~~-~-~~plvllHG~~~~~~~w-~~~~~-------------~L~~~~~vi~~Dl~-G~G 63 (276)
T TIGR02240 7 IDLDG-QSIRTAVRPG-----KE-G-LTPLLIFNGIGANLELV-FPFIE-------------ALDPDLEVIAFDVP-GVG 63 (276)
T ss_pred eccCC-cEEEEEEecC-----CC-C-CCcEEEEeCCCcchHHH-HHHHH-------------HhccCceEEEECCC-CCC
Confidence 44433 4677777541 22 2 26789999876666653 21110 12346799999999 999
Q ss_pred cccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCC
Q 012237 121 YSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDS 200 (467)
Q Consensus 121 FSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg 200 (467)
.|-... ...+-+..++++.+++... .-.+++|.|+|+||..+-.+|.+-.+ .++++++.|+
T Consensus 64 ~S~~~~---~~~~~~~~~~~~~~~i~~l-------~~~~~~LvG~S~GG~va~~~a~~~p~---------~v~~lvl~~~ 124 (276)
T TIGR02240 64 GSSTPR---HPYRFPGLAKLAARMLDYL-------DYGQVNAIGVSWGGALAQQFAHDYPE---------RCKKLILAAT 124 (276)
T ss_pred CCCCCC---CcCcHHHHHHHHHHHHHHh-------CcCceEEEEECHHHHHHHHHHHHCHH---------HhhheEEecc
Confidence 995322 1235566667766666542 34689999999999877777654322 5899999877
Q ss_pred CCC
Q 012237 201 WIS 203 (467)
Q Consensus 201 ~i~ 203 (467)
...
T Consensus 125 ~~~ 127 (276)
T TIGR02240 125 AAG 127 (276)
T ss_pred CCc
Confidence 654
No 26
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=98.88 E-value=7.9e-08 Score=90.15 Aligned_cols=99 Identities=17% Similarity=0.174 Sum_probs=65.6
Q ss_pred CCEEEEEcCCCChhhhhcccccccCCCcccCCCCCcchhccccceeecCCCccccccccCCCCcccChHHHHHHHHHHHH
Q 012237 67 WPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLM 146 (467)
Q Consensus 67 ~PlilWlnGGPG~SS~~~g~f~E~GP~~~~l~~n~~sW~~~anvlfiDqPvGtGFSy~~~~~~~~~~~~~~a~d~~~fL~ 146 (467)
+|++|.++|-++.+.. ...+.| ...+..+++.+|.| |.|.|.... ...+.++.++++.++++
T Consensus 13 ~~~li~~hg~~~~~~~-~~~~~~-------------~l~~~~~v~~~d~~-G~G~s~~~~---~~~~~~~~~~~~~~~i~ 74 (251)
T TIGR02427 13 APVLVFINSLGTDLRM-WDPVLP-------------ALTPDFRVLRYDKR-GHGLSDAPE---GPYSIEDLADDVLALLD 74 (251)
T ss_pred CCeEEEEcCcccchhh-HHHHHH-------------HhhcccEEEEecCC-CCCCCCCCC---CCCCHHHHHHHHHHHHH
Confidence 4999999986555544 222211 12245799999999 999885322 23466777888877776
Q ss_pred HHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecC
Q 012237 147 ELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGD 199 (467)
Q Consensus 147 ~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGN 199 (467)
.+ ...+++|.|+|+||..+-.+|.+-.+ .++++++-+
T Consensus 75 ~~-------~~~~v~liG~S~Gg~~a~~~a~~~p~---------~v~~li~~~ 111 (251)
T TIGR02427 75 HL-------GIERAVFCGLSLGGLIAQGLAARRPD---------RVRALVLSN 111 (251)
T ss_pred Hh-------CCCceEEEEeCchHHHHHHHHHHCHH---------HhHHHhhcc
Confidence 33 34579999999999887777754222 366666644
No 27
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=98.87 E-value=5.8e-08 Score=89.41 Aligned_cols=103 Identities=22% Similarity=0.232 Sum_probs=72.9
Q ss_pred EEEEcCCCChhhhhcccccccCCCcccCCCCCcchhccccceeecCCCccccccccCCCCcccChHHHHHHHHHHHHHHH
Q 012237 70 ILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELF 149 (467)
Q Consensus 70 ilWlnGGPG~SS~~~g~f~E~GP~~~~l~~n~~sW~~~anvlfiDqPvGtGFSy~~~~~~~~~~~~~~a~d~~~fL~~f~ 149 (467)
||.++|++|.+..+ ..+. ..+.+..+++.+|.| |.|.|..... ....+-++.++++.++|+.
T Consensus 1 vv~~hG~~~~~~~~-~~~~-------------~~l~~~~~v~~~d~~-G~G~s~~~~~-~~~~~~~~~~~~l~~~l~~-- 62 (228)
T PF12697_consen 1 VVFLHGFGGSSESW-DPLA-------------EALARGYRVIAFDLP-GHGRSDPPPD-YSPYSIEDYAEDLAELLDA-- 62 (228)
T ss_dssp EEEE-STTTTGGGG-HHHH-------------HHHHTTSEEEEEECT-TSTTSSSHSS-GSGGSHHHHHHHHHHHHHH--
T ss_pred eEEECCCCCCHHHH-HHHH-------------HHHhCCCEEEEEecC-Cccccccccc-cCCcchhhhhhhhhhcccc--
Confidence 68999999888763 3222 122367899999999 9999975432 2245667778777777763
Q ss_pred HhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCCCCCc
Q 012237 150 NKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISP 204 (467)
Q Consensus 150 ~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg~i~p 204 (467)
+..++++|.|+|+||..+..++.+..+ .++|+++-++....
T Consensus 63 -----~~~~~~~lvG~S~Gg~~a~~~a~~~p~---------~v~~~vl~~~~~~~ 103 (228)
T PF12697_consen 63 -----LGIKKVILVGHSMGGMIALRLAARYPD---------RVKGLVLLSPPPPL 103 (228)
T ss_dssp -----TTTSSEEEEEETHHHHHHHHHHHHSGG---------GEEEEEEESESSSH
T ss_pred -----ccccccccccccccccccccccccccc---------ccccceeecccccc
Confidence 333799999999999888777754211 79999997776653
No 28
>PRK03592 haloalkane dehalogenase; Provisional
Probab=98.86 E-value=1.4e-08 Score=99.60 Aligned_cols=103 Identities=19% Similarity=0.211 Sum_probs=74.6
Q ss_pred CEEEEEcCCCChhhhhcccccccCCCcccCCCCCcchhccccceeecCCCccccccccCCCCcccChHHHHHHHHHHHHH
Q 012237 68 PIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLME 147 (467)
Q Consensus 68 PlilWlnGGPG~SS~~~g~f~E~GP~~~~l~~n~~sW~~~anvlfiDqPvGtGFSy~~~~~~~~~~~~~~a~d~~~fL~~ 147 (467)
|.||.++|.|+.+..+ -.+. -.+.+...++-+|.| |.|+|..... ..+.++.|+|+..+++.
T Consensus 28 ~~vvllHG~~~~~~~w-~~~~-------------~~L~~~~~via~D~~-G~G~S~~~~~---~~~~~~~a~dl~~ll~~ 89 (295)
T PRK03592 28 DPIVFLHGNPTSSYLW-RNII-------------PHLAGLGRCLAPDLI-GMGASDKPDI---DYTFADHARYLDAWFDA 89 (295)
T ss_pred CEEEEECCCCCCHHHH-HHHH-------------HHHhhCCEEEEEcCC-CCCCCCCCCC---CCCHHHHHHHHHHHHHH
Confidence 7899999999888774 2111 134555699999999 9999964322 23667778887777764
Q ss_pred HHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCCCCCc
Q 012237 148 LFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISP 204 (467)
Q Consensus 148 f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg~i~p 204 (467)
+...+++|.|+|.||..+-.+|.+..+ .++++++.|+...|
T Consensus 90 -------l~~~~~~lvGhS~Gg~ia~~~a~~~p~---------~v~~lil~~~~~~~ 130 (295)
T PRK03592 90 -------LGLDDVVLVGHDWGSALGFDWAARHPD---------RVRGIAFMEAIVRP 130 (295)
T ss_pred -------hCCCCeEEEEECHHHHHHHHHHHhChh---------heeEEEEECCCCCC
Confidence 334789999999999887777765432 58999998885544
No 29
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.86 E-value=1.6e-07 Score=90.85 Aligned_cols=135 Identities=16% Similarity=0.212 Sum_probs=85.8
Q ss_pred CCceeeeeEeCCCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhcccccccCCCcccCCCCCcchhccccceee
Q 012237 34 ASEEWGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFV 113 (467)
Q Consensus 34 ~~~~sGyv~v~~~~~lFywf~es~~~~~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~l~~n~~sW~~~anvlfi 113 (467)
.+-..=|+.+++....+ .++-.. .+ ++++-++.++|=-+.+++++- |=.+..+.-||-.|
T Consensus 63 v~~~~~~v~i~~~~~iw--~~~~~~---~~-~~~~plVliHGyGAg~g~f~~--------------Nf~~La~~~~vyai 122 (365)
T KOG4409|consen 63 VPYSKKYVRIPNGIEIW--TITVSN---ES-ANKTPLVLIHGYGAGLGLFFR--------------NFDDLAKIRNVYAI 122 (365)
T ss_pred CCcceeeeecCCCceeE--EEeecc---cc-cCCCcEEEEeccchhHHHHHH--------------hhhhhhhcCceEEe
Confidence 33344588887544443 333211 11 334556778974222222222 33466678999999
Q ss_pred cCCCccccccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeee
Q 012237 114 DNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLG 193 (467)
Q Consensus 114 DqPvGtGFSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLk 193 (467)
|+| |-|+|.... +..+.+.+-+.+++-+++|.... .-.+.+|.|+|+||......|.+-.+ .++
T Consensus 123 Dll-G~G~SSRP~---F~~d~~~~e~~fvesiE~WR~~~---~L~KmilvGHSfGGYLaa~YAlKyPe---------rV~ 186 (365)
T KOG4409|consen 123 DLL-GFGRSSRPK---FSIDPTTAEKEFVESIEQWRKKM---GLEKMILVGHSFGGYLAAKYALKYPE---------RVE 186 (365)
T ss_pred ccc-CCCCCCCCC---CCCCcccchHHHHHHHHHHHHHc---CCcceeEeeccchHHHHHHHHHhChH---------hhc
Confidence 999 999997542 23333444458899999999854 34689999999999777777765544 478
Q ss_pred eEeecCCCCCc
Q 012237 194 GVALGDSWISP 204 (467)
Q Consensus 194 Gi~IGNg~i~p 204 (467)
-++|-+||--|
T Consensus 187 kLiLvsP~Gf~ 197 (365)
T KOG4409|consen 187 KLILVSPWGFP 197 (365)
T ss_pred eEEEecccccc
Confidence 88996666544
No 30
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=98.85 E-value=2.8e-07 Score=93.50 Aligned_cols=105 Identities=19% Similarity=0.159 Sum_probs=72.1
Q ss_pred CCEEEEEcCCCChhhhhcccccccCCCcccCCCCCcchhccccceeecCCCccccccccCCC-CcccChHHHHHHHHHHH
Q 012237 67 WPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNS-SFVKNDVEAANDLTTLL 145 (467)
Q Consensus 67 ~PlilWlnGGPG~SS~~~g~f~E~GP~~~~l~~n~~sW~~~anvlfiDqPvGtGFSy~~~~~-~~~~~~~~~a~d~~~fL 145 (467)
.|.||.|+|.|+.+.++ -.+. -...+..+|+-+|.| |.|+|...... ....+.++.++++..++
T Consensus 127 ~~~ivllHG~~~~~~~w-~~~~-------------~~L~~~~~Via~Dlp-G~G~S~~p~~~~~~~ys~~~~a~~l~~~i 191 (383)
T PLN03084 127 NPPVLLIHGFPSQAYSY-RKVL-------------PVLSKNYHAIAFDWL-GFGFSDKPQPGYGFNYTLDEYVSSLESLI 191 (383)
T ss_pred CCeEEEECCCCCCHHHH-HHHH-------------HHHhcCCEEEEECCC-CCCCCCCCcccccccCCHHHHHHHHHHHH
Confidence 38999999999877663 2111 123456899999999 99999653221 12346777888888888
Q ss_pred HHHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCCCC
Q 012237 146 MELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWI 202 (467)
Q Consensus 146 ~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg~i 202 (467)
+.. ...+++|+|+|+||..+-.+|.+-.+ .++++++-|+..
T Consensus 192 ~~l-------~~~~~~LvG~s~GG~ia~~~a~~~P~---------~v~~lILi~~~~ 232 (383)
T PLN03084 192 DEL-------KSDKVSLVVQGYFSPPVVKYASAHPD---------KIKKLILLNPPL 232 (383)
T ss_pred HHh-------CCCCceEEEECHHHHHHHHHHHhChH---------hhcEEEEECCCC
Confidence 753 34589999999999665555543222 589999977643
No 31
>PRK10749 lysophospholipase L2; Provisional
Probab=98.82 E-value=3.3e-07 Score=91.50 Aligned_cols=131 Identities=12% Similarity=0.103 Sum_probs=83.8
Q ss_pred eeeEeCCCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhcccccccCCCcccCCCCCcchh-ccccceeecCCC
Q 012237 39 GYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWL-KKADLLFVDNPV 117 (467)
Q Consensus 39 Gyv~v~~~~~lFywf~es~~~~~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~l~~n~~sW~-~~anvlfiDqPv 117 (467)
+++...++..++|+.++. .++ +|+||.++|-.+.+.. +.-+. ..+. +-.+++-+|.|
T Consensus 33 ~~~~~~~g~~l~~~~~~~----~~~---~~~vll~HG~~~~~~~-y~~~~-------------~~l~~~g~~v~~~D~~- 90 (330)
T PRK10749 33 AEFTGVDDIPIRFVRFRA----PHH---DRVVVICPGRIESYVK-YAELA-------------YDLFHLGYDVLIIDHR- 90 (330)
T ss_pred eEEEcCCCCEEEEEEccC----CCC---CcEEEEECCccchHHH-HHHHH-------------HHHHHCCCeEEEEcCC-
Confidence 444444455788887752 122 3899999998655543 21110 0122 44799999999
Q ss_pred ccccccccCCC---CcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeee
Q 012237 118 GTGYSYVEDNS---SFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGG 194 (467)
Q Consensus 118 GtGFSy~~~~~---~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkG 194 (467)
|.|.|...... ....+-++.++|+..+++.....+ ...++++.|+|+||..+-.+|.+- +-.++|
T Consensus 91 G~G~S~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---~~~~~~l~GhSmGG~ia~~~a~~~---------p~~v~~ 158 (330)
T PRK10749 91 GQGRSGRLLDDPHRGHVERFNDYVDDLAAFWQQEIQPG---PYRKRYALAHSMGGAILTLFLQRH---------PGVFDA 158 (330)
T ss_pred CCCCCCCCCCCCCcCccccHHHHHHHHHHHHHHHHhcC---CCCCeEEEEEcHHHHHHHHHHHhC---------CCCcce
Confidence 99999532111 112356778888888887665533 347899999999997666655431 115799
Q ss_pred EeecCCCCC
Q 012237 195 VALGDSWIS 203 (467)
Q Consensus 195 i~IGNg~i~ 203 (467)
+++.+|...
T Consensus 159 lvl~~p~~~ 167 (330)
T PRK10749 159 IALCAPMFG 167 (330)
T ss_pred EEEECchhc
Confidence 999777643
No 32
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=98.80 E-value=8.8e-07 Score=90.41 Aligned_cols=127 Identities=18% Similarity=0.196 Sum_probs=84.4
Q ss_pred CCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhcccccccCCCcccCCCCCcchh-ccccceeecCCCcccccc
Q 012237 45 PKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWL-KKADLLFVDNPVGTGYSY 123 (467)
Q Consensus 45 ~~~~lFywf~es~~~~~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~l~~n~~sW~-~~anvlfiDqPvGtGFSy 123 (467)
++..+|++.+..+ .+ +.+|+||+++|.++.+.. +-.+. ..+. +-.+++-+|.| |.|.|-
T Consensus 119 ~~~~l~~~~~~p~----~~-~~~~~Vl~lHG~~~~~~~-~~~~a-------------~~L~~~Gy~V~~~D~r-GhG~S~ 178 (395)
T PLN02652 119 RRNALFCRSWAPA----AG-EMRGILIIIHGLNEHSGR-YLHFA-------------KQLTSCGFGVYAMDWI-GHGGSD 178 (395)
T ss_pred CCCEEEEEEecCC----CC-CCceEEEEECCchHHHHH-HHHHH-------------HHHHHCCCEEEEeCCC-CCCCCC
Confidence 3457888877642 11 224899999999876654 21111 1232 35789999999 999986
Q ss_pred ccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCCCCC
Q 012237 124 VEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWIS 203 (467)
Q Consensus 124 ~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg~i~ 203 (467)
... .+..+.+..++|+..+++..-..+| ..+++|+|+|+||..+..++.+ .+..-.++|+++.+|++.
T Consensus 179 ~~~--~~~~~~~~~~~Dl~~~l~~l~~~~~---~~~i~lvGhSmGG~ial~~a~~-------p~~~~~v~glVL~sP~l~ 246 (395)
T PLN02652 179 GLH--GYVPSLDYVVEDTEAFLEKIRSENP---GVPCFLFGHSTGGAVVLKAASY-------PSIEDKLEGIVLTSPALR 246 (395)
T ss_pred CCC--CCCcCHHHHHHHHHHHHHHHHHhCC---CCCEEEEEECHHHHHHHHHHhc-------cCcccccceEEEECcccc
Confidence 432 2344667778888888887766555 3589999999999776554421 111125899999777653
No 33
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=98.80 E-value=1.4e-07 Score=88.31 Aligned_cols=60 Identities=17% Similarity=0.081 Sum_probs=49.1
Q ss_pred hcCceEEEEeccCCcCCCchhHHHHHHHcCcccccccccCCCeeeEeCCCceeeeEEEEEcCEEEEEEcCCcccccCCCC
Q 012237 363 AKGVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFQVPVDQ 442 (467)
Q Consensus 363 ~~~irVLiy~Gd~D~i~n~~g~~~~i~~L~W~g~~~f~~~~~~pw~~~~~~~~~G~~k~~~nltf~~V~~AGHm~vP~dq 442 (467)
+-..+|||.+|..|.+++....+.+.+.+. +-++.++.++||+ ++.++
T Consensus 186 ~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~-------------------------------~~~~~~~~~~gH~-~~~e~ 233 (245)
T TIGR01738 186 NISVPFLRLYGYLDGLVPAKVVPYLDKLAP-------------------------------HSELYIFAKAAHA-PFLSH 233 (245)
T ss_pred cCCCCEEEEeecCCcccCHHHHHHHHHhCC-------------------------------CCeEEEeCCCCCC-ccccC
Confidence 336899999999999999777665554443 3345778999999 99999
Q ss_pred cHHHHHHHHHHh
Q 012237 443 PCIALNMLAAMT 454 (467)
Q Consensus 443 P~~a~~mi~~fl 454 (467)
|+...+.|.+||
T Consensus 234 p~~~~~~i~~fi 245 (245)
T TIGR01738 234 AEAFCALLVAFK 245 (245)
T ss_pred HHHHHHHHHhhC
Confidence 999999999986
No 34
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=98.78 E-value=3.4e-07 Score=86.56 Aligned_cols=100 Identities=21% Similarity=0.261 Sum_probs=69.2
Q ss_pred CCEEEEEcCCCChhhhhcccccccCCCcccCCCCCcchhccccceeecCCCccccccccCCCCcccChHHHHHHHHHHHH
Q 012237 67 WPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLM 146 (467)
Q Consensus 67 ~PlilWlnGGPG~SS~~~g~f~E~GP~~~~l~~n~~sW~~~anvlfiDqPvGtGFSy~~~~~~~~~~~~~~a~d~~~fL~ 146 (467)
.|.||.++|.||.+.++ -.+. ... +..+++.+|.| |.|.|.... ..+-++.++++.++|.
T Consensus 2 ~p~vvllHG~~~~~~~w-~~~~-----------~~l---~~~~vi~~D~~-G~G~S~~~~----~~~~~~~~~~l~~~l~ 61 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDW-QPVG-----------EAL---PDYPRLYIDLP-GHGGSAAIS----VDGFADVSRLLSQTLQ 61 (242)
T ss_pred CCEEEEECCCCCChHHH-HHHH-----------HHc---CCCCEEEecCC-CCCCCCCcc----ccCHHHHHHHHHHHHH
Confidence 38899999999988774 2221 111 34899999999 999995322 2356677777777776
Q ss_pred HHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCCC
Q 012237 147 ELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSW 201 (467)
Q Consensus 147 ~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg~ 201 (467)
. +...++++.|+|+||..+-.+|.+... -.++++++.++.
T Consensus 62 ~-------~~~~~~~lvG~S~Gg~va~~~a~~~~~--------~~v~~lvl~~~~ 101 (242)
T PRK11126 62 S-------YNILPYWLVGYSLGGRIAMYYACQGLA--------GGLCGLIVEGGN 101 (242)
T ss_pred H-------cCCCCeEEEEECHHHHHHHHHHHhCCc--------ccccEEEEeCCC
Confidence 3 345799999999999777777654211 028888886554
No 35
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=98.75 E-value=1.7e-06 Score=89.87 Aligned_cols=134 Identities=16% Similarity=0.117 Sum_probs=82.5
Q ss_pred CCceeeeeEeCCCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhcccccccCCCcccCCCCCcchhccccceee
Q 012237 34 ASEEWGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFV 113 (467)
Q Consensus 34 ~~~~sGyv~v~~~~~lFywf~es~~~~~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~l~~n~~sW~~~anvlfi 113 (467)
.+...-|++.++ ..+||+....+ ..+ . .|.||+|+|.+|.+.++...+. |. + ...+.+...++.+
T Consensus 174 ~~~~~~~~~~~~-~~l~~~~~gp~---~~~-~-k~~VVLlHG~~~s~~~W~~~~~---~~---L---~~~~~~~yrVia~ 238 (481)
T PLN03087 174 CKFCTSWLSSSN-ESLFVHVQQPK---DNK-A-KEDVLFIHGFISSSAFWTETLF---PN---F---SDAAKSTYRLFAV 238 (481)
T ss_pred cceeeeeEeeCC-eEEEEEEecCC---CCC-C-CCeEEEECCCCccHHHHHHHHH---HH---H---HHHhhCCCEEEEE
Confidence 344457888765 47888776532 112 1 3789999999988876421100 00 0 0024457899999
Q ss_pred cCCCccccccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeee
Q 012237 114 DNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLG 193 (467)
Q Consensus 114 DqPvGtGFSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLk 193 (467)
|.| |.|.|-.... ...+.++.++++. +.+.+ ++...+++|.|+|+||..+-.+|.+-.+ .++
T Consensus 239 Dl~-G~G~S~~p~~--~~ytl~~~a~~l~---~~ll~---~lg~~k~~LVGhSmGG~iAl~~A~~~Pe---------~V~ 300 (481)
T PLN03087 239 DLL-GFGRSPKPAD--SLYTLREHLEMIE---RSVLE---RYKVKSFHIVAHSLGCILALALAVKHPG---------AVK 300 (481)
T ss_pred CCC-CCCCCcCCCC--CcCCHHHHHHHHH---HHHHH---HcCCCCEEEEEECHHHHHHHHHHHhChH---------hcc
Confidence 999 9998853221 1234555555553 12333 2335689999999999888777765322 578
Q ss_pred eEeecCC
Q 012237 194 GVALGDS 200 (467)
Q Consensus 194 Gi~IGNg 200 (467)
++++.++
T Consensus 301 ~LVLi~~ 307 (481)
T PLN03087 301 SLTLLAP 307 (481)
T ss_pred EEEEECC
Confidence 8888665
No 36
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=98.75 E-value=2.2e-07 Score=86.87 Aligned_cols=103 Identities=27% Similarity=0.343 Sum_probs=66.5
Q ss_pred CEEEEEcCCCChhhhhcccccccCCCcccCCCCCcchhccccceeecCCCccccccccCCCCcccChHHHHHHHHHHHHH
Q 012237 68 PIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLME 147 (467)
Q Consensus 68 PlilWlnGGPG~SS~~~g~f~E~GP~~~~l~~n~~sW~~~anvlfiDqPvGtGFSy~~~~~~~~~~~~~~a~d~~~fL~~ 147 (467)
|.||.++|.+|.+..+ -.+. .. ..+..+++-+|.| |.|.|..... ....+.++.++++ +..
T Consensus 2 ~~vv~~hG~~~~~~~~-~~~~-----------~~--L~~~~~v~~~d~~-g~G~s~~~~~-~~~~~~~~~~~~~---~~~ 62 (251)
T TIGR03695 2 PVLVFLHGFLGSGADW-QALI-----------EL--LGPHFRCLAIDLP-GHGSSQSPDE-IERYDFEEAAQDI---LAT 62 (251)
T ss_pred CEEEEEcCCCCchhhH-HHHH-----------HH--hcccCeEEEEcCC-CCCCCCCCCc-cChhhHHHHHHHH---HHH
Confidence 8899999998877663 2111 11 1245799999999 9999854321 1233455556652 222
Q ss_pred HHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCCC
Q 012237 148 LFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSW 201 (467)
Q Consensus 148 f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg~ 201 (467)
+.+. +..++++|.|+|+||..+..+|.+.. -.++++++-++.
T Consensus 63 ~~~~---~~~~~~~l~G~S~Gg~ia~~~a~~~~---------~~v~~lil~~~~ 104 (251)
T TIGR03695 63 LLDQ---LGIEPFFLVGYSMGGRIALYYALQYP---------ERVQGLILESGS 104 (251)
T ss_pred HHHH---cCCCeEEEEEeccHHHHHHHHHHhCc---------hheeeeEEecCC
Confidence 2232 23578999999999988888776532 158888886654
No 37
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=98.63 E-value=2e-06 Score=83.00 Aligned_cols=134 Identities=20% Similarity=0.207 Sum_probs=87.0
Q ss_pred ceeeeeEeCCCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhcccccccCCCcccCCCCC-cchhcc-ccceee
Q 012237 36 EEWGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRN-STWLKK-ADLLFV 113 (467)
Q Consensus 36 ~~sGyv~v~~~~~lFywf~es~~~~~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~l~~n~-~sW~~~-anvlfi 113 (467)
...+|+++++ +++++.|. -++.. |+|+.|+|=|=.+=++- +. -..... ..++.+
T Consensus 22 ~~hk~~~~~g---I~~h~~e~-----g~~~g-P~illlHGfPe~wyswr---------------~q~~~la~~~~rviA~ 77 (322)
T KOG4178|consen 22 ISHKFVTYKG---IRLHYVEG-----GPGDG-PIVLLLHGFPESWYSWR---------------HQIPGLASRGYRVIAP 77 (322)
T ss_pred cceeeEEEcc---EEEEEEee-----cCCCC-CEEEEEccCCccchhhh---------------hhhhhhhhcceEEEec
Confidence 3457888864 88888884 23343 99999999885543320 00 011222 789999
Q ss_pred cCCCccccccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeee
Q 012237 114 DNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLG 193 (467)
Q Consensus 114 DqPvGtGFSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLk 193 (467)
|.+ |-|+|-+.... ...|.+..+.|+..+|. .+....+++.|++||+..+=.+|..-.+.. .+ -++++
T Consensus 78 Dlr-GyG~Sd~P~~~-~~Yt~~~l~~di~~lld-------~Lg~~k~~lvgHDwGaivaw~la~~~Perv-~~--lv~~n 145 (322)
T KOG4178|consen 78 DLR-GYGFSDAPPHI-SEYTIDELVGDIVALLD-------HLGLKKAFLVGHDWGAIVAWRLALFYPERV-DG--LVTLN 145 (322)
T ss_pred CCC-CCCCCCCCCCc-ceeeHHHHHHHHHHHHH-------HhccceeEEEeccchhHHHHHHHHhChhhc-ce--EEEec
Confidence 999 99999765331 24467778888887776 344678999999999987777776554422 11 22333
Q ss_pred eEeecCCCCCccc
Q 012237 194 GVALGDSWISPED 206 (467)
Q Consensus 194 Gi~IGNg~i~p~~ 206 (467)
+... |+..+|..
T Consensus 146 v~~~-~p~~~~~~ 157 (322)
T KOG4178|consen 146 VPFP-NPKLKPLD 157 (322)
T ss_pred CCCC-Ccccchhh
Confidence 3333 66666654
No 38
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=98.61 E-value=1.9e-06 Score=102.29 Aligned_cols=103 Identities=20% Similarity=0.236 Sum_probs=70.6
Q ss_pred CCEEEEEcCCCChhhhhcccccccCCCcccCCCCCcchhccccceeecCCCccccccccCC-----CCcccChHHHHHHH
Q 012237 67 WPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDN-----SSFVKNDVEAANDL 141 (467)
Q Consensus 67 ~PlilWlnGGPG~SS~~~g~f~E~GP~~~~l~~n~~sW~~~anvlfiDqPvGtGFSy~~~~-----~~~~~~~~~~a~d~ 141 (467)
.|.||+|||.+|.+..+. -+. ....+..+++.+|.| |.|.|..... .....+.+..++++
T Consensus 1371 ~~~vVllHG~~~s~~~w~-~~~-------------~~L~~~~rVi~~Dl~-G~G~S~~~~~~~~~~~~~~~si~~~a~~l 1435 (1655)
T PLN02980 1371 GSVVLFLHGFLGTGEDWI-PIM-------------KAISGSARCISIDLP-GHGGSKIQNHAKETQTEPTLSVELVADLL 1435 (1655)
T ss_pred CCeEEEECCCCCCHHHHH-HHH-------------HHHhCCCEEEEEcCC-CCCCCCCccccccccccccCCHHHHHHHH
Confidence 489999999999988742 111 122345799999999 9998864321 11234567777777
Q ss_pred HHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCC
Q 012237 142 TTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDS 200 (467)
Q Consensus 142 ~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg 200 (467)
..+++. +...+++|.|+|+||..+-.+|.+..+ .++++++-+|
T Consensus 1436 ~~ll~~-------l~~~~v~LvGhSmGG~iAl~~A~~~P~---------~V~~lVlis~ 1478 (1655)
T PLN02980 1436 YKLIEH-------ITPGKVTLVGYSMGARIALYMALRFSD---------KIEGAVIISG 1478 (1655)
T ss_pred HHHHHH-------hCCCCEEEEEECHHHHHHHHHHHhChH---------hhCEEEEECC
Confidence 777663 334689999999999877777654322 5778877554
No 39
>PRK07581 hypothetical protein; Validated
Probab=98.60 E-value=6.8e-06 Score=82.26 Aligned_cols=59 Identities=17% Similarity=0.094 Sum_probs=51.3
Q ss_pred CceEEEEeccCCcCCCchhHHHHHHHcCcccccccccCCCeeeEeCCCceeeeEEEEEcCEEEEEEcC-CcccccCCCCc
Q 012237 365 GVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILG-AGHFQVPVDQP 443 (467)
Q Consensus 365 ~irVLiy~Gd~D~i~n~~g~~~~i~~L~W~g~~~f~~~~~~pw~~~~~~~~~G~~k~~~nltf~~V~~-AGHm~vP~dqP 443 (467)
.++||++.|+.|.++|....+.+.+.+. +.++++|.+ +||+ ++.+||
T Consensus 275 ~~PtLvI~G~~D~~~p~~~~~~l~~~ip-------------------------------~a~l~~i~~~~GH~-~~~~~~ 322 (339)
T PRK07581 275 TAKTFVMPISTDLYFPPEDCEAEAALIP-------------------------------NAELRPIESIWGHL-AGFGQN 322 (339)
T ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHhCC-------------------------------CCeEEEeCCCCCcc-ccccCc
Confidence 6899999999999999888877766664 345577898 9999 999999
Q ss_pred HHHHHHHHHHhc
Q 012237 444 CIALNMLAAMTD 455 (467)
Q Consensus 444 ~~a~~mi~~fl~ 455 (467)
+....++++||+
T Consensus 323 ~~~~~~~~~~~~ 334 (339)
T PRK07581 323 PADIAFIDAALK 334 (339)
T ss_pred HHHHHHHHHHHH
Confidence 999999999986
No 40
>PLN02965 Probable pheophorbidase
Probab=98.54 E-value=2.5e-06 Score=81.75 Aligned_cols=99 Identities=17% Similarity=0.150 Sum_probs=67.0
Q ss_pred EEEEcCCCChhhhhcccccccCCCcccCCCCCcch-hccccceeecCCCccccccccCCCCcccChHHHHHHHHHHHHHH
Q 012237 70 ILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTW-LKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMEL 148 (467)
Q Consensus 70 ilWlnGGPG~SS~~~g~f~E~GP~~~~l~~n~~sW-~~~anvlfiDqPvGtGFSy~~~~~~~~~~~~~~a~d~~~fL~~f 148 (467)
||.++|.++.+.++-. .--.. .+...++-+|.| |.|.|-.... ...+.++.|+|+.+++..
T Consensus 6 vvllHG~~~~~~~w~~--------------~~~~L~~~~~~via~Dl~-G~G~S~~~~~--~~~~~~~~a~dl~~~l~~- 67 (255)
T PLN02965 6 FVFVHGASHGAWCWYK--------------LATLLDAAGFKSTCVDLT-GAGISLTDSN--TVSSSDQYNRPLFALLSD- 67 (255)
T ss_pred EEEECCCCCCcCcHHH--------------HHHHHhhCCceEEEecCC-cCCCCCCCcc--ccCCHHHHHHHHHHHHHh-
Confidence 8889998765544311 01123 234789999999 9999953321 234567778888877763
Q ss_pred HHhCcccCC-CCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCCC
Q 012237 149 FNKNEILQK-SPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSW 201 (467)
Q Consensus 149 ~~~fp~~~~-~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg~ 201 (467)
+.. ++++|.|+|+||..+..+|.+..+ .++++++-|+.
T Consensus 68 ------l~~~~~~~lvGhSmGG~ia~~~a~~~p~---------~v~~lvl~~~~ 106 (255)
T PLN02965 68 ------LPPDHKVILVGHSIGGGSVTEALCKFTD---------KISMAIYVAAA 106 (255)
T ss_pred ------cCCCCCEEEEecCcchHHHHHHHHhCch---------heeEEEEEccc
Confidence 322 599999999999888877764322 57888886664
No 41
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=98.47 E-value=8.6e-06 Score=81.76 Aligned_cols=62 Identities=15% Similarity=-0.000 Sum_probs=51.7
Q ss_pred CceEEEEeccCCcCCCchhHHHHHHHcCcccccccccCCCeeeEeCCCceeeeEEEEEcCEEEEEEcC-CcccccCCCCc
Q 012237 365 GVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILG-AGHFQVPVDQP 443 (467)
Q Consensus 365 ~irVLiy~Gd~D~i~n~~g~~~~i~~L~W~g~~~f~~~~~~pw~~~~~~~~~G~~k~~~nltf~~V~~-AGHm~vP~dqP 443 (467)
.+++||+.|+.|.++|....+...+.+. .+-.+++|.+ |||+ ++.++|
T Consensus 277 ~~PtLvi~G~~D~~~p~~~~~~~~~~i~------------------------------p~a~l~~i~~~aGH~-~~lE~P 325 (343)
T PRK08775 277 RVPTVVVAVEGDRLVPLADLVELAEGLG------------------------------PRGSLRVLRSPYGHD-AFLKET 325 (343)
T ss_pred CCCeEEEEeCCCEeeCHHHHHHHHHHcC------------------------------CCCeEEEEeCCccHH-HHhcCH
Confidence 5899999999999999887777777663 0234577874 9999 999999
Q ss_pred HHHHHHHHHHhcCC
Q 012237 444 CIALNMLAAMTDSP 457 (467)
Q Consensus 444 ~~a~~mi~~fl~~~ 457 (467)
++...++.+||...
T Consensus 326 e~~~~~l~~FL~~~ 339 (343)
T PRK08775 326 DRIDAILTTALRST 339 (343)
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999999754
No 42
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=98.47 E-value=5.1e-06 Score=83.92 Aligned_cols=101 Identities=19% Similarity=0.098 Sum_probs=67.9
Q ss_pred CCEEEEEcCCCChhhhhcccccccCCCcccCCCCCcchhccccceeecCCCccccccccCCCCcccChHHHHHHHHHHHH
Q 012237 67 WPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLM 146 (467)
Q Consensus 67 ~PlilWlnGGPG~SS~~~g~f~E~GP~~~~l~~n~~sW~~~anvlfiDqPvGtGFSy~~~~~~~~~~~~~~a~d~~~fL~ 146 (467)
.|.||+++|.+|.+..+ ..+.+ ...+..+++-+|.| |.|.|-... ...+.++.++++..+++
T Consensus 131 ~~~vl~~HG~~~~~~~~-~~~~~-------------~l~~~~~v~~~d~~-g~G~s~~~~---~~~~~~~~~~~~~~~~~ 192 (371)
T PRK14875 131 GTPVVLIHGFGGDLNNW-LFNHA-------------ALAAGRPVIALDLP-GHGASSKAV---GAGSLDELAAAVLAFLD 192 (371)
T ss_pred CCeEEEECCCCCccchH-HHHHH-------------HHhcCCEEEEEcCC-CCCCCCCCC---CCCCHHHHHHHHHHHHH
Confidence 38899999998887763 22221 12234789999999 999984321 13456666776666664
Q ss_pred HHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCCC
Q 012237 147 ELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSW 201 (467)
Q Consensus 147 ~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg~ 201 (467)
. +...+++|.|+|+||..+..+|.+-. -.++++++-++.
T Consensus 193 ~-------~~~~~~~lvG~S~Gg~~a~~~a~~~~---------~~v~~lv~~~~~ 231 (371)
T PRK14875 193 A-------LGIERAHLVGHSMGGAVALRLAARAP---------QRVASLTLIAPA 231 (371)
T ss_pred h-------cCCccEEEEeechHHHHHHHHHHhCc---------hheeEEEEECcC
Confidence 2 33468999999999998887775421 157787775543
No 43
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=98.44 E-value=2.4e-06 Score=92.45 Aligned_cols=115 Identities=23% Similarity=0.361 Sum_probs=72.5
Q ss_pred CCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhcccccccCCCcccCCCCCc-chhccccceeecCCCcccccc
Q 012237 45 PKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNS-TWLKKADLLFVDNPVGTGYSY 123 (467)
Q Consensus 45 ~~~~lFywf~es~~~~~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~l~~n~~-sW~~~anvlfiDqPvGtGFSy 123 (467)
++..+..|++.-.. .+|.++-|+|++++||| +++ .|. . ...+.. =+.+-+.||+++-.--+||+.
T Consensus 374 dG~~i~~~l~~P~~--~~~~k~yP~i~~~hGGP--~~~-~~~-------~--~~~~~q~~~~~G~~V~~~n~RGS~GyG~ 439 (620)
T COG1506 374 DGETIHGWLYKPPG--FDPRKKYPLIVYIHGGP--SAQ-VGY-------S--FNPEIQVLASAGYAVLAPNYRGSTGYGR 439 (620)
T ss_pred CCCEEEEEEecCCC--CCCCCCCCEEEEeCCCC--ccc-ccc-------c--cchhhHHHhcCCeEEEEeCCCCCCccHH
Confidence 35588888887432 35555569999999999 555 441 0 111222 245678899998553345432
Q ss_pred c--cCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHH
Q 012237 124 V--EDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLG 176 (467)
Q Consensus 124 ~--~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA 176 (467)
. .... -.--....+|+..+++ |+.+.|..-...+.|+|.||||...-.++
T Consensus 440 ~F~~~~~--~~~g~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~ 491 (620)
T COG1506 440 EFADAIR--GDWGGVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAA 491 (620)
T ss_pred HHHHhhh--hccCCccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHH
Confidence 2 1000 0011234577888888 88999988778999999999995544443
No 44
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=98.39 E-value=6.4e-05 Score=75.13 Aligned_cols=144 Identities=17% Similarity=0.170 Sum_probs=84.7
Q ss_pred CceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhcccccc----c----CCCcccCCCCCc---------ch-hcc
Q 012237 46 KAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEE----V----GPFDTYLKPRNS---------TW-LKK 107 (467)
Q Consensus 46 ~~~lFywf~es~~~~~~~~~~~PlilWlnGGPG~SS~~~g~f~E----~----GP~~~~l~~n~~---------sW-~~~ 107 (467)
+..++++.++. .+| +-+|+.++|=-+-+.. -|++ . +|+.+ ..+.| .. .+-
T Consensus 7 g~~l~~~~~~~----~~~---kg~v~i~HG~~eh~~~---~~~~~~~~~~~~~~~~~~--~~~ry~~y~~~~~~~l~~~G 74 (332)
T TIGR01607 7 GLLLKTYSWIV----KNA---IGIIVLIHGLKSHLRL---QFLKINAKIVNNDRAVLI--DTDNYYIYKDSWIENFNKNG 74 (332)
T ss_pred CCeEEEeeeec----cCC---eEEEEEECCCchhhhh---hhhhcCcccCCCCeeEEE--cCCcceEeeHHHHHHHHHCC
Confidence 34688877763 234 4799999985444431 1111 0 11111 11122 23 245
Q ss_pred ccceeecCCCccccccccCC-CCcccChHHHHHHHHHHHHHHHHh--------C--------cccC-CCCEEEEecccCc
Q 012237 108 ADLLFVDNPVGTGYSYVEDN-SSFVKNDVEAANDLTTLLMELFNK--------N--------EILQ-KSPLFIVAESYGG 169 (467)
Q Consensus 108 anvlfiDqPvGtGFSy~~~~-~~~~~~~~~~a~d~~~fL~~f~~~--------f--------p~~~-~~~~yi~GESYgG 169 (467)
.+|+-+|.| |.|.|..... .....+-++.++|+..+++..-+. + .++. +.|++|.|+|.||
T Consensus 75 ~~V~~~D~r-GHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg 153 (332)
T TIGR01607 75 YSVYGLDLQ-GHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGG 153 (332)
T ss_pred CcEEEeccc-ccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCcc
Confidence 889999999 9999975422 222346778889999988865431 0 0232 6799999999999
Q ss_pred chHHHHHHHHHHHHHcCcceeeeeeEeecCCCCC
Q 012237 170 KFAATLGLAAVKAIEAGKLKLKLGGVALGDSWIS 203 (467)
Q Consensus 170 ~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg~i~ 203 (467)
..+..++.+..+.. ...-...++|+++-.|.+.
T Consensus 154 ~i~~~~~~~~~~~~-~~~~~~~i~g~i~~s~~~~ 186 (332)
T TIGR01607 154 NIALRLLELLGKSN-ENNDKLNIKGCISLSGMIS 186 (332)
T ss_pred HHHHHHHHHhcccc-ccccccccceEEEeccceE
Confidence 77666554432210 0001236899987666653
No 45
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.38 E-value=7.9e-06 Score=81.16 Aligned_cols=61 Identities=25% Similarity=0.278 Sum_probs=51.5
Q ss_pred CceEEEEeccCCcCCCchhHHHHHHHcCcccccccccCCCeeeEeCCCceeeeEEEEEcCEEEEEEcCCcccccCCCCcH
Q 012237 365 GVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFQVPVDQPC 444 (467)
Q Consensus 365 ~irVLiy~Gd~D~i~n~~g~~~~i~~L~W~g~~~f~~~~~~pw~~~~~~~~~G~~k~~~nltf~~V~~AGHm~vP~dqP~ 444 (467)
+.+|||..|+.|.++|....+...+++. |..+..|.+|||- +..++|+
T Consensus 264 ~~pvlii~G~~D~~~p~~~~~~~~~~~p-------------------------------n~~~~~I~~~gH~-~h~e~Pe 311 (326)
T KOG1454|consen 264 KCPVLIIWGDKDQIVPLELAEELKKKLP-------------------------------NAELVEIPGAGHL-PHLERPE 311 (326)
T ss_pred CCceEEEEcCcCCccCHHHHHHHHhhCC-------------------------------CceEEEeCCCCcc-cccCCHH
Confidence 3789999999999999775544444443 7888999999999 9999999
Q ss_pred HHHHHHHHHhcCC
Q 012237 445 IALNMLAAMTDSP 457 (467)
Q Consensus 445 ~a~~mi~~fl~~~ 457 (467)
+....|..|+.+.
T Consensus 312 ~~~~~i~~Fi~~~ 324 (326)
T KOG1454|consen 312 EVAALLRSFIARL 324 (326)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999999753
No 46
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=98.36 E-value=1.9e-06 Score=85.08 Aligned_cols=125 Identities=18% Similarity=0.303 Sum_probs=81.1
Q ss_pred eeeeEeCCCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhcccccccCCCcccCCCCCcchh-ccccceeecCC
Q 012237 38 WGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWL-KKADLLFVDNP 116 (467)
Q Consensus 38 sGyv~v~~~~~lFywf~es~~~~~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~l~~n~~sW~-~~anvlfiDqP 116 (467)
.+|+++.++..++|+-+. ++ +. |-||.++||||.++. .... ..|. +..+|+-+|.|
T Consensus 6 ~~~~~~~~~~~l~y~~~g------~~-~~-~~lvllHG~~~~~~~-~~~~--------------~~~~~~~~~vi~~D~~ 62 (306)
T TIGR01249 6 SGYLNVSDNHQLYYEQSG------NP-DG-KPVVFLHGGPGSGTD-PGCR--------------RFFDPETYRIVLFDQR 62 (306)
T ss_pred CCeEEcCCCcEEEEEECc------CC-CC-CEEEEECCCCCCCCC-HHHH--------------hccCccCCEEEEECCC
Confidence 479999877778875432 23 22 456889999987654 1110 0121 45799999999
Q ss_pred CccccccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEe
Q 012237 117 VGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVA 196 (467)
Q Consensus 117 vGtGFSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~ 196 (467)
|.|.|..... ....+.++.++++..+++. +...++++.|+||||..+..++.+-.+ .+++++
T Consensus 63 -G~G~S~~~~~-~~~~~~~~~~~dl~~l~~~-------l~~~~~~lvG~S~GG~ia~~~a~~~p~---------~v~~lv 124 (306)
T TIGR01249 63 -GCGKSTPHAC-LEENTTWDLVADIEKLREK-------LGIKNWLVFGGSWGSTLALAYAQTHPE---------VVTGLV 124 (306)
T ss_pred -CCCCCCCCCC-cccCCHHHHHHHHHHHHHH-------cCCCCEEEEEECHHHHHHHHHHHHChH---------hhhhhe
Confidence 9999974321 1233455667666555542 234679999999999877777654322 578888
Q ss_pred ecCCCCC
Q 012237 197 LGDSWIS 203 (467)
Q Consensus 197 IGNg~i~ 203 (467)
+-+..+.
T Consensus 125 l~~~~~~ 131 (306)
T TIGR01249 125 LRGIFLL 131 (306)
T ss_pred eeccccC
Confidence 8666553
No 47
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=98.32 E-value=7e-05 Score=76.27 Aligned_cols=66 Identities=12% Similarity=0.004 Sum_probs=53.6
Q ss_pred CceEEEEeccCCcCCCchhHHHHHHHcCcccccccccCCCeeeEeCCCceeeeEEEEEcCEEEEEEc-CCcccccCCCCc
Q 012237 365 GVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWIL-GAGHFQVPVDQP 443 (467)
Q Consensus 365 ~irVLiy~Gd~D~i~n~~g~~~~i~~L~W~g~~~f~~~~~~pw~~~~~~~~~G~~k~~~nltf~~V~-~AGHm~vP~dqP 443 (467)
.+++||..|+.|.++|....++..+.+.=. + .+.+++.|. ++||+ .+.++|
T Consensus 309 ~~PtLvI~G~~D~~~p~~~~~~la~~i~~a------------------~---------~~~~l~~i~~~~GH~-~~le~p 360 (379)
T PRK00175 309 KARFLVVSFTSDWLFPPARSREIVDALLAA------------------G---------ADVSYAEIDSPYGHD-AFLLDD 360 (379)
T ss_pred CCCEEEEEECCccccCHHHHHHHHHHHHhc------------------C---------CCeEEEEeCCCCCch-hHhcCH
Confidence 589999999999999988887777777500 0 024667785 99999 999999
Q ss_pred HHHHHHHHHHhcCCC
Q 012237 444 CIALNMLAAMTDSPA 458 (467)
Q Consensus 444 ~~a~~mi~~fl~~~~ 458 (467)
++..+.|.+||++..
T Consensus 361 ~~~~~~L~~FL~~~~ 375 (379)
T PRK00175 361 PRYGRLVRAFLERAA 375 (379)
T ss_pred HHHHHHHHHHHHhhh
Confidence 999999999998743
No 48
>PLN02511 hydrolase
Probab=98.26 E-value=4.2e-05 Score=78.08 Aligned_cols=118 Identities=14% Similarity=0.123 Sum_probs=72.4
Q ss_pred eeeeEeCCCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhh-hcccccccCCCcccCCCCCcchhccccceeecCC
Q 012237 38 WGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGV-GIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNP 116 (467)
Q Consensus 38 sGyv~v~~~~~lFywf~es~~~~~~~~~~~PlilWlnGGPG~SS~-~~g~f~E~GP~~~~l~~n~~sW~~~anvlfiDqP 116 (467)
.-++...++..+.+..+..... ..+ .++|+||.|+|..|+|.. +.--+ -.....+-.+++-+|.|
T Consensus 73 re~l~~~DG~~~~ldw~~~~~~-~~~-~~~p~vvllHG~~g~s~~~y~~~~------------~~~~~~~g~~vv~~d~r 138 (388)
T PLN02511 73 RECLRTPDGGAVALDWVSGDDR-ALP-ADAPVLILLPGLTGGSDDSYVRHM------------LLRARSKGWRVVVFNSR 138 (388)
T ss_pred EEEEECCCCCEEEEEecCcccc-cCC-CCCCEEEEECCCCCCCCCHHHHHH------------HHHHHHCCCEEEEEecC
Confidence 3567776666666544432111 112 345999999999998742 11000 01112456789999999
Q ss_pred CccccccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHH
Q 012237 117 VGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLG 176 (467)
Q Consensus 117 vGtGFSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA 176 (467)
|.|-|.......+ ....++|+.++++..-.++| +.++++.|+|.||..+-.++
T Consensus 139 -G~G~s~~~~~~~~---~~~~~~Dl~~~i~~l~~~~~---~~~~~lvG~SlGg~i~~~yl 191 (388)
T PLN02511 139 -GCADSPVTTPQFY---SASFTGDLRQVVDHVAGRYP---SANLYAAGWSLGANILVNYL 191 (388)
T ss_pred -CCCCCCCCCcCEE---cCCchHHHHHHHHHHHHHCC---CCCEEEEEechhHHHHHHHH
Confidence 9998864322211 23445677777776666555 46999999999997665544
No 49
>PRK05855 short chain dehydrogenase; Validated
Probab=98.09 E-value=0.00014 Score=77.91 Aligned_cols=100 Identities=14% Similarity=0.237 Sum_probs=66.3
Q ss_pred CceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhcccccccCCCcccCCCCCcchhccccceeecCCCcccccccc
Q 012237 46 KAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVE 125 (467)
Q Consensus 46 ~~~lFywf~es~~~~~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~l~~n~~sW~~~anvlfiDqPvGtGFSy~~ 125 (467)
+..+.|+-+. ++ + .|.||.++|.++.+..+ .-+.+ -+.+..+|+-+|.| |.|.|...
T Consensus 12 g~~l~~~~~g------~~-~-~~~ivllHG~~~~~~~w-~~~~~-------------~L~~~~~Vi~~D~~-G~G~S~~~ 68 (582)
T PRK05855 12 GVRLAVYEWG------DP-D-RPTVVLVHGYPDNHEVW-DGVAP-------------LLADRFRVVAYDVR-GAGRSSAP 68 (582)
T ss_pred CEEEEEEEcC------CC-C-CCeEEEEcCCCchHHHH-HHHHH-------------HhhcceEEEEecCC-CCCCCCCC
Confidence 4467665432 23 2 48999999998777653 22211 12345789999999 99999753
Q ss_pred CCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHH
Q 012237 126 DNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATL 175 (467)
Q Consensus 126 ~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~l 175 (467)
... ...+.++.++|+..+++..- ...|++|.|+|+||..+-.+
T Consensus 69 ~~~-~~~~~~~~a~dl~~~i~~l~------~~~~~~lvGhS~Gg~~a~~~ 111 (582)
T PRK05855 69 KRT-AAYTLARLADDFAAVIDAVS------PDRPVHLLAHDWGSIQGWEA 111 (582)
T ss_pred Ccc-cccCHHHHHHHHHHHHHHhC------CCCcEEEEecChHHHHHHHH
Confidence 221 23467888889988887531 13579999999999544333
No 50
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=97.93 E-value=3.3e-05 Score=71.71 Aligned_cols=57 Identities=19% Similarity=0.274 Sum_probs=48.1
Q ss_pred hcCceEEEEeccCCcCCCchhHHHHHHHcCcccccccccCCCeeeEeCCCceeeeEEEEEcCEEEEEEcCCcccccCCCC
Q 012237 363 AKGVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFQVPVDQ 442 (467)
Q Consensus 363 ~~~irVLiy~Gd~D~i~n~~g~~~~i~~L~W~g~~~f~~~~~~pw~~~~~~~~~G~~k~~~nltf~~V~~AGHm~vP~dq 442 (467)
+-.+++|+++|..|.++|....+...+.+. +..++++.++||. ...+.
T Consensus 173 ~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~-------------------------------~~~~~~~~~~GH~-~~~~~ 220 (230)
T PF00561_consen 173 NIKVPTLIIWGEDDPLVPPESSEQLAKLIP-------------------------------NSQLVLIEGSGHF-AFLEG 220 (230)
T ss_dssp TTTSEEEEEEETTCSSSHHHHHHHHHHHST-------------------------------TEEEEEETTCCST-HHHHS
T ss_pred ccCCCeEEEEeCCCCCCCHHHHHHHHHhcC-------------------------------CCEEEECCCCChH-HHhcC
Confidence 357999999999999999888877555554 4566889999999 99999
Q ss_pred cHHHHHHHH
Q 012237 443 PCIALNMLA 451 (467)
Q Consensus 443 P~~a~~mi~ 451 (467)
|+...++|.
T Consensus 221 ~~~~~~~i~ 229 (230)
T PF00561_consen 221 PDEFNEIII 229 (230)
T ss_dssp HHHHHHHHH
T ss_pred HHhhhhhhc
Confidence 999988875
No 51
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=97.93 E-value=4e-05 Score=76.27 Aligned_cols=134 Identities=21% Similarity=0.341 Sum_probs=80.7
Q ss_pred eEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhcccccccCCCcccCCCCCcchhccccceeecCCCccccccccCC
Q 012237 48 HMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDN 127 (467)
Q Consensus 48 ~lFywf~es~~~~~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~l~~n~~sW~~~anvlfiDqPvGtGFSy~~~~ 127 (467)
.-.||+++++.+ .+|++| |+||+++|| |.+.+.=|+.+..-.+-+..-+...+|.+|-..-. ....+
T Consensus 105 ~~s~Wlvk~P~~-~~pk~D-pVlIYlHGG--------GY~l~~~p~qi~~L~~i~~~l~~~SILvLDYsLt~---~~~~~ 171 (374)
T PF10340_consen 105 SQSYWLVKAPNR-FKPKSD-PVLIYLHGG--------GYFLGTTPSQIEFLLNIYKLLPEVSILVLDYSLTS---SDEHG 171 (374)
T ss_pred cceEEEEeCCcc-cCCCCC-cEEEEEcCC--------eeEecCCHHHHHHHHHHHHHcCCCeEEEEeccccc---cccCC
Confidence 567999996432 356555 999999999 56677777764311111222223489999966332 00012
Q ss_pred CCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCCCCCcc
Q 012237 128 SSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPE 205 (467)
Q Consensus 128 ~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg~i~p~ 205 (467)
..+++-..| +.+..+...+. -...++.|+|+|=||+.+-.+.+++.+.+ +...+ |++++-.||+.+.
T Consensus 172 ~~yPtQL~q----lv~~Y~~Lv~~---~G~~nI~LmGDSAGGnL~Ls~LqyL~~~~---~~~~P-k~~iLISPWv~l~ 238 (374)
T PF10340_consen 172 HKYPTQLRQ----LVATYDYLVES---EGNKNIILMGDSAGGNLALSFLQYLKKPN---KLPYP-KSAILISPWVNLV 238 (374)
T ss_pred CcCchHHHH----HHHHHHHHHhc---cCCCeEEEEecCccHHHHHHHHHHHhhcC---CCCCC-ceeEEECCCcCCc
Confidence 223322222 33333333321 23578999999999999999888865432 22222 6888889999986
No 52
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=97.91 E-value=0.0029 Score=63.66 Aligned_cols=63 Identities=10% Similarity=-0.013 Sum_probs=50.6
Q ss_pred CceEEEEeccCCcCCCchhHHHHHHHcCcccccccccCCCeeeEeCCCceeeeEEEEEcCEEEEEEc-CCcccccCCCCc
Q 012237 365 GVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWIL-GAGHFQVPVDQP 443 (467)
Q Consensus 365 ~irVLiy~Gd~D~i~n~~g~~~~i~~L~W~g~~~f~~~~~~pw~~~~~~~~~G~~k~~~nltf~~V~-~AGHm~vP~dqP 443 (467)
.+++|++.|+.|.++|....+...+.+.= . . -..+|+.|. +|||+ ++.++|
T Consensus 288 ~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~-----------------~-~---------~~v~~~~i~~~~GH~-~~le~p 339 (351)
T TIGR01392 288 KAPFLVVSITSDWLFPPAESRELAKALPA-----------------A-G---------LRVTYVEIESPYGHD-AFLVET 339 (351)
T ss_pred CCCEEEEEeCCccccCHHHHHHHHHHHhh-----------------c-C---------CceEEEEeCCCCCcc-hhhcCH
Confidence 68999999999999998888887777750 0 0 023455564 89999 999999
Q ss_pred HHHHHHHHHHhc
Q 012237 444 CIALNMLAAMTD 455 (467)
Q Consensus 444 ~~a~~mi~~fl~ 455 (467)
+...+.|.+||+
T Consensus 340 ~~~~~~l~~FL~ 351 (351)
T TIGR01392 340 DQVEELIRGFLR 351 (351)
T ss_pred HHHHHHHHHHhC
Confidence 999999999985
No 53
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=97.85 E-value=0.00074 Score=66.34 Aligned_cols=134 Identities=18% Similarity=0.272 Sum_probs=91.6
Q ss_pred ceeeeeEeCCCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhcccccccCCCcccCCCCCcch-hccccceeec
Q 012237 36 EEWGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTW-LKKADLLFVD 114 (467)
Q Consensus 36 ~~sGyv~v~~~~~lFywf~es~~~~~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~l~~n~~sW-~~~anvlfiD 114 (467)
...|+....++..++|+.++.. ++| +-+|++++|.=.++.- +--+. +-+ ..-..++=+|
T Consensus 9 ~~~~~~~~~d~~~~~~~~~~~~---~~~---~g~Vvl~HG~~Eh~~r-y~~la-------------~~l~~~G~~V~~~D 68 (298)
T COG2267 9 RTEGYFTGADGTRLRYRTWAAP---EPP---KGVVVLVHGLGEHSGR-YEELA-------------DDLAARGFDVYALD 68 (298)
T ss_pred cccceeecCCCceEEEEeecCC---CCC---CcEEEEecCchHHHHH-HHHHH-------------HHHHhCCCEEEEec
Confidence 3446666666779999999853 222 2799999998766654 32111 112 2456788899
Q ss_pred CCCcccccc-ccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeee
Q 012237 115 NPVGTGYSY-VEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLG 193 (467)
Q Consensus 115 qPvGtGFSy-~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLk 193 (467)
+| |.|.|. ... ..+.+-.+...|+-.|++..-..+| ..|++|+|+|.||-.+...+.... -+++
T Consensus 69 ~R-GhG~S~r~~r--g~~~~f~~~~~dl~~~~~~~~~~~~---~~p~~l~gHSmGg~Ia~~~~~~~~---------~~i~ 133 (298)
T COG2267 69 LR-GHGRSPRGQR--GHVDSFADYVDDLDAFVETIAEPDP---GLPVFLLGHSMGGLIALLYLARYP---------PRID 133 (298)
T ss_pred CC-CCCCCCCCCc--CCchhHHHHHHHHHHHHHHHhccCC---CCCeEEEEeCcHHHHHHHHHHhCC---------cccc
Confidence 99 999997 332 2344566777777777776655444 579999999999976666554322 3799
Q ss_pred eEeecCCCCCc
Q 012237 194 GVALGDSWISP 204 (467)
Q Consensus 194 Gi~IGNg~i~p 204 (467)
|+++-+|++.+
T Consensus 134 ~~vLssP~~~l 144 (298)
T COG2267 134 GLVLSSPALGL 144 (298)
T ss_pred EEEEECccccC
Confidence 99998887765
No 54
>PLN02872 triacylglycerol lipase
Probab=97.74 E-value=0.00074 Score=68.92 Aligned_cols=63 Identities=13% Similarity=0.135 Sum_probs=50.1
Q ss_pred CceEEEEeccCCcCCCchhHHHHHHHcCcccccccccCCCeeeEeCCCceeeeEEEEEcCEEEEEEcCCcccc--cCCCC
Q 012237 365 GVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFQ--VPVDQ 442 (467)
Q Consensus 365 ~irVLiy~Gd~D~i~n~~g~~~~i~~L~W~g~~~f~~~~~~pw~~~~~~~~~G~~k~~~nltf~~V~~AGHm~--vP~dq 442 (467)
.++|+|+.|..|.+++....+++.+.|.= ...+..+.++||+. ...+.
T Consensus 325 ~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~------------------------------~~~l~~l~~~gH~dfi~~~ea 374 (395)
T PLN02872 325 SLPLWMGYGGTDGLADVTDVEHTLAELPS------------------------------KPELLYLENYGHIDFLLSTSA 374 (395)
T ss_pred CccEEEEEcCCCCCCCHHHHHHHHHHCCC------------------------------ccEEEEcCCCCCHHHHhCcch
Confidence 58999999999999999999888888860 01235578999950 55699
Q ss_pred cHHHHHHHHHHhcCC
Q 012237 443 PCIALNMLAAMTDSP 457 (467)
Q Consensus 443 P~~a~~mi~~fl~~~ 457 (467)
|+..++-|-+|+++.
T Consensus 375 pe~V~~~Il~fL~~~ 389 (395)
T PLN02872 375 KEDVYNHMIQFFRSL 389 (395)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999998753
No 55
>PRK10985 putative hydrolase; Provisional
Probab=97.64 E-value=0.0097 Score=59.18 Aligned_cols=118 Identities=14% Similarity=0.102 Sum_probs=61.6
Q ss_pred CceeeeeEeCCCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhccc-ccccCCCcccCCCCCcchh-cccccee
Q 012237 35 SEEWGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGN-FEEVGPFDTYLKPRNSTWL-KKADLLF 112 (467)
Q Consensus 35 ~~~sGyv~v~~~~~lFywf~es~~~~~~~~~~~PlilWlnGGPG~SS~~~g~-f~E~GP~~~~l~~n~~sW~-~~anvlf 112 (467)
+.+.=.++..++..+.+++.+.. ..+ .++|+||.++|.+|.+...+.. +. . ... +-.+++-
T Consensus 30 ~~~~~~~~~~dg~~~~l~w~~~~---~~~-~~~p~vll~HG~~g~~~~~~~~~~~------------~-~l~~~G~~v~~ 92 (324)
T PRK10985 30 TPYWQRLELPDGDFVDLAWSEDP---AQA-RHKPRLVLFHGLEGSFNSPYAHGLL------------E-AAQKRGWLGVV 92 (324)
T ss_pred CcceeEEECCCCCEEEEecCCCC---ccC-CCCCEEEEeCCCCCCCcCHHHHHHH------------H-HHHHCCCEEEE
Confidence 33444566666656554444321 122 3359999999999875431100 00 0 011 2346778
Q ss_pred ecCCCccccccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHH
Q 012237 113 VDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLG 176 (467)
Q Consensus 113 iDqPvGtGFSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA 176 (467)
+|.+ |.|-|-......+... ..+|+..+++..-++++ ..+++++|+|.||..+-.++
T Consensus 93 ~d~r-G~g~~~~~~~~~~~~~---~~~D~~~~i~~l~~~~~---~~~~~~vG~S~GG~i~~~~~ 149 (324)
T PRK10985 93 MHFR-GCSGEPNRLHRIYHSG---ETEDARFFLRWLQREFG---HVPTAAVGYSLGGNMLACLL 149 (324)
T ss_pred EeCC-CCCCCccCCcceECCC---chHHHHHHHHHHHHhCC---CCCEEEEEecchHHHHHHHH
Confidence 8987 7764432211111111 13444444433333343 46899999999997554433
No 56
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=97.57 E-value=0.00038 Score=67.09 Aligned_cols=133 Identities=11% Similarity=0.058 Sum_probs=78.5
Q ss_pred eeEeCCCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhcccccccCCCcccCCCCCcchh-ccccceeecCCCc
Q 012237 40 YVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWL-KKADLLFVDNPVG 118 (467)
Q Consensus 40 yv~v~~~~~lFywf~es~~~~~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~l~~n~~sW~-~~anvlfiDqPvG 118 (467)
|++... .++|.|+++.. .+ +.+|+||.++|-.+-..-..-.+.. --..+. .-.+++-+|.| |
T Consensus 4 ~l~~~~-g~~~~~~~~p~----~~-~~~~~VlllHG~g~~~~~~~~~~~~----------la~~La~~Gy~Vl~~Dl~-G 66 (266)
T TIGR03101 4 FLDAPH-GFRFCLYHPPV----AV-GPRGVVIYLPPFAEEMNKSRRMVAL----------QARAFAAGGFGVLQIDLY-G 66 (266)
T ss_pred EecCCC-CcEEEEEecCC----CC-CCceEEEEECCCcccccchhHHHHH----------HHHHHHHCCCEEEEECCC-C
Confidence 344433 47899998742 12 1248999999853311000000000 001232 34799999999 9
Q ss_pred cccccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeec
Q 012237 119 TGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALG 198 (467)
Q Consensus 119 tGFSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IG 198 (467)
.|.|..... ..+.+...+|+..+++ |++.. ...+++|+|+|.||..+..+|.+. +-.++++++-
T Consensus 67 ~G~S~g~~~---~~~~~~~~~Dv~~ai~-~L~~~---~~~~v~LvG~SmGG~vAl~~A~~~---------p~~v~~lVL~ 130 (266)
T TIGR03101 67 CGDSAGDFA---AARWDVWKEDVAAAYR-WLIEQ---GHPPVTLWGLRLGALLALDAANPL---------AAKCNRLVLW 130 (266)
T ss_pred CCCCCCccc---cCCHHHHHHHHHHHHH-HHHhc---CCCCEEEEEECHHHHHHHHHHHhC---------ccccceEEEe
Confidence 999864322 1244455666655543 44432 146899999999998887776442 1257889997
Q ss_pred CCCCCcc
Q 012237 199 DSWISPE 205 (467)
Q Consensus 199 Ng~i~p~ 205 (467)
+|.++..
T Consensus 131 ~P~~~g~ 137 (266)
T TIGR03101 131 QPVVSGK 137 (266)
T ss_pred ccccchH
Confidence 7777643
No 57
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=97.52 E-value=0.0048 Score=62.93 Aligned_cols=66 Identities=15% Similarity=0.119 Sum_probs=53.5
Q ss_pred hcCceEEEEeccCCcCCCchhHHHHHHHcCcccccccccCCCeeeEeCCCceeeeEEEEEcCEEEEEEcC-CcccccCCC
Q 012237 363 AKGVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILG-AGHFQVPVD 441 (467)
Q Consensus 363 ~~~irVLiy~Gd~D~i~n~~g~~~~i~~L~W~g~~~f~~~~~~pw~~~~~~~~~G~~k~~~nltf~~V~~-AGHm~vP~d 441 (467)
.-..+||++.|+.|.++|....++..+.++=. + .+.++.+|.+ +||+ .+.+
T Consensus 321 ~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~------------------~---------~~a~l~~I~s~~GH~-~~le 372 (389)
T PRK06765 321 NIEANVLMIPCKQDLLQPPRYNYKMVDILQKQ------------------G---------KYAEVYEIESINGHM-AGVF 372 (389)
T ss_pred cCCCCEEEEEeCCCCCCCHHHHHHHHHHhhhc------------------C---------CCeEEEEECCCCCcc-hhhc
Confidence 33689999999999999987777766666400 0 1567788985 9999 9999
Q ss_pred CcHHHHHHHHHHhcC
Q 012237 442 QPCIALNMLAAMTDS 456 (467)
Q Consensus 442 qP~~a~~mi~~fl~~ 456 (467)
+|+.....|.+|++.
T Consensus 373 ~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 373 DIHLFEKKIYEFLNR 387 (389)
T ss_pred CHHHHHHHHHHHHcc
Confidence 999999999999976
No 58
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=97.51 E-value=0.00033 Score=67.99 Aligned_cols=105 Identities=15% Similarity=0.072 Sum_probs=67.2
Q ss_pred CCCCEEEEEcCCCChhhhhcccccccCCCcccCCCCCcchh-ccccceeecCCCccccccccCCCCcccChHHHHHHHHH
Q 012237 65 KPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWL-KKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTT 143 (467)
Q Consensus 65 ~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~l~~n~~sW~-~~anvlfiDqPvGtGFSy~~~~~~~~~~~~~~a~d~~~ 143 (467)
+++|.||+++|..+.++++ ..+. .... +..+++-+|.| |.|.|..... ...+.++.++++.+
T Consensus 16 ~~~p~vvliHG~~~~~~~w-~~~~-------------~~L~~~g~~vi~~dl~-g~G~s~~~~~--~~~~~~~~~~~l~~ 78 (273)
T PLN02211 16 RQPPHFVLIHGISGGSWCW-YKIR-------------CLMENSGYKVTCIDLK-SAGIDQSDAD--SVTTFDEYNKPLID 78 (273)
T ss_pred CCCCeEEEECCCCCCcCcH-HHHH-------------HHHHhCCCEEEEeccc-CCCCCCCCcc--cCCCHHHHHHHHHH
Confidence 3359999999987666653 1110 0111 24799999999 9998753221 12466666766666
Q ss_pred HHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCCC
Q 012237 144 LLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSW 201 (467)
Q Consensus 144 fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg~ 201 (467)
+++. .. ..++++|.|+||||..+-.++.+..+ .++++++-++.
T Consensus 79 ~i~~----l~--~~~~v~lvGhS~GG~v~~~~a~~~p~---------~v~~lv~~~~~ 121 (273)
T PLN02211 79 FLSS----LP--ENEKVILVGHSAGGLSVTQAIHRFPK---------KICLAVYVAAT 121 (273)
T ss_pred HHHh----cC--CCCCEEEEEECchHHHHHHHHHhChh---------heeEEEEeccc
Confidence 6653 21 14799999999999877776654322 57788885543
No 59
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=97.44 E-value=0.0011 Score=61.58 Aligned_cols=91 Identities=13% Similarity=0.109 Sum_probs=59.8
Q ss_pred ccccceeecCCCccccccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHc
Q 012237 106 KKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEA 185 (467)
Q Consensus 106 ~~anvlfiDqPvGtGFSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~ 185 (467)
+-..|+.+|.+.+.||+..-........-....+|+.++++..-++. ..-...+.|+|.||||+.+-.++.+-
T Consensus 13 ~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~-~iD~~ri~i~G~S~GG~~a~~~~~~~------ 85 (213)
T PF00326_consen 13 QGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQY-YIDPDRIGIMGHSYGGYLALLAATQH------ 85 (213)
T ss_dssp TT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTT-SEEEEEEEEEEETHHHHHHHHHHHHT------
T ss_pred CCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccc-cccceeEEEEcccccccccchhhccc------
Confidence 56789999999888877642111122234566778888887655543 45567899999999998777666421
Q ss_pred CcceeeeeeEeecCCCCCccc
Q 012237 186 GKLKLKLGGVALGDSWISPED 206 (467)
Q Consensus 186 ~~~~inLkGi~IGNg~i~p~~ 206 (467)
+-.++.++.++|.+|+..
T Consensus 86 ---~~~f~a~v~~~g~~d~~~ 103 (213)
T PF00326_consen 86 ---PDRFKAAVAGAGVSDLFS 103 (213)
T ss_dssp ---CCGSSEEEEESE-SSTTC
T ss_pred ---ceeeeeeeccceecchhc
Confidence 115789999999988643
No 60
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=97.36 E-value=0.00068 Score=63.06 Aligned_cols=28 Identities=11% Similarity=0.075 Sum_probs=24.5
Q ss_pred eEEEEeccCCcCCCchhHHHHHHHcCcc
Q 012237 367 NVTVYNGQLDVICSTKGTEAWIEKLKWD 394 (467)
Q Consensus 367 rVLiy~Gd~D~i~n~~g~~~~i~~L~W~ 394 (467)
+++|.+|..|.+||....+...+.|+.-
T Consensus 170 ~~~i~hG~~D~vVp~~~~~~~~~~l~~~ 197 (212)
T TIGR01840 170 IMSVVHGDADYTVLPGNADEIRDAMLKV 197 (212)
T ss_pred eEEEEEcCCCceeCcchHHHHHHHHHHh
Confidence 4789999999999999999999888744
No 61
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=97.26 E-value=0.001 Score=68.51 Aligned_cols=80 Identities=15% Similarity=0.216 Sum_probs=54.4
Q ss_pred cccceeecCCCccccccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcC
Q 012237 107 KADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAG 186 (467)
Q Consensus 107 ~anvlfiDqPvGtGFSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~ 186 (467)
-.+||-+|.| |+|.|.... ...+. ..+...+.+++...|.....++.|+|.|+||.+++.+|..-
T Consensus 222 Gy~vl~~D~p-G~G~s~~~~---~~~d~----~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~------- 286 (414)
T PRK05077 222 GIAMLTIDMP-SVGFSSKWK---LTQDS----SLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLE------- 286 (414)
T ss_pred CCEEEEECCC-CCCCCCCCC---ccccH----HHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhC-------
Confidence 3889999999 999985321 11111 11223445566667766678999999999999998887531
Q ss_pred cceeeeeeEeecCCCCC
Q 012237 187 KLKLKLGGVALGDSWIS 203 (467)
Q Consensus 187 ~~~inLkGi~IGNg~i~ 203 (467)
+-.++++++.+|.++
T Consensus 287 --p~ri~a~V~~~~~~~ 301 (414)
T PRK05077 287 --PPRLKAVACLGPVVH 301 (414)
T ss_pred --CcCceEEEEECCccc
Confidence 115889888776654
No 62
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=96.99 E-value=0.0027 Score=60.07 Aligned_cols=106 Identities=26% Similarity=0.445 Sum_probs=71.6
Q ss_pred CCCCCEEEEEcCCCChhhhhccccc-ccCCCcccCCCCCcchhccccceeecCCCccccccccCCCCcccChHHHHHHHH
Q 012237 64 SKPWPIILWLQGGPGASGVGIGNFE-EVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLT 142 (467)
Q Consensus 64 ~~~~PlilWlnGGPG~SS~~~g~f~-E~GP~~~~l~~n~~sW~~~anvlfiDqPvGtGFSy~~~~~~~~~~~~~~a~d~~ 142 (467)
++.-|+++.++|| |.|.|-++.|. |+ +.- -..-++-+|.- |.|-|..+++++ -+.+..++|+.
T Consensus 71 ~t~gpil~l~HG~-G~S~LSfA~~a~el---------~s~---~~~r~~a~DlR-gHGeTk~~~e~d--lS~eT~~KD~~ 134 (343)
T KOG2564|consen 71 ATEGPILLLLHGG-GSSALSFAIFASEL---------KSK---IRCRCLALDLR-GHGETKVENEDD--LSLETMSKDFG 134 (343)
T ss_pred CCCccEEEEeecC-cccchhHHHHHHHH---------Hhh---cceeEEEeecc-ccCccccCChhh--cCHHHHHHHHH
Confidence 3445999999988 67765333332 11 000 01123779977 999998876643 57889999999
Q ss_pred HHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEee
Q 012237 143 TLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVAL 197 (467)
Q Consensus 143 ~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~I 197 (467)
..++.+|..-| .++.|.|+|.||..+.+.|.. +.--+|-|+.+
T Consensus 135 ~~i~~~fge~~----~~iilVGHSmGGaIav~~a~~--------k~lpsl~Gl~v 177 (343)
T KOG2564|consen 135 AVIKELFGELP----PQIILVGHSMGGAIAVHTAAS--------KTLPSLAGLVV 177 (343)
T ss_pred HHHHHHhccCC----CceEEEeccccchhhhhhhhh--------hhchhhhceEE
Confidence 99999996444 379999999999776555431 11125788877
No 63
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=96.85 E-value=0.0072 Score=58.04 Aligned_cols=118 Identities=17% Similarity=0.189 Sum_probs=77.7
Q ss_pred eeeEeCCCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhcccccccCCCcccCCCCCcch-hccccceeecCCC
Q 012237 39 GYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTW-LKKADLLFVDNPV 117 (467)
Q Consensus 39 Gyv~v~~~~~lFywf~es~~~~~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~l~~n~~sW-~~~anvlfiDqPv 117 (467)
-|+.-..+..+|.-.+.-. +++ +.+-+|+.++|.-+-||-.+--+. -.. ..-.-+--+|++
T Consensus 30 ~~~~n~rG~~lft~~W~p~---~~~-~pr~lv~~~HG~g~~~s~~~~~~a-------------~~l~~~g~~v~a~D~~- 91 (313)
T KOG1455|consen 30 SFFTNPRGAKLFTQSWLPL---SGT-EPRGLVFLCHGYGEHSSWRYQSTA-------------KRLAKSGFAVYAIDYE- 91 (313)
T ss_pred eeEEcCCCCEeEEEecccC---CCC-CCceEEEEEcCCcccchhhHHHHH-------------HHHHhCCCeEEEeecc-
Confidence 3555555668887766532 122 335799999997666542121000 001 112346779999
Q ss_pred ccccccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHH
Q 012237 118 GTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGL 177 (467)
Q Consensus 118 GtGFSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~ 177 (467)
|.|.|-+. ..++.+-+.+.+|...|+..+- ..+++++.|.|++|||.||..+-.++.
T Consensus 92 GhG~SdGl--~~yi~~~d~~v~D~~~~~~~i~-~~~e~~~lp~FL~GeSMGGAV~Ll~~~ 148 (313)
T KOG1455|consen 92 GHGRSDGL--HAYVPSFDLVVDDVISFFDSIK-EREENKGLPRFLFGESMGGAVALLIAL 148 (313)
T ss_pred CCCcCCCC--cccCCcHHHHHHHHHHHHHHHh-hccccCCCCeeeeecCcchHHHHHHHh
Confidence 99999754 4678899999999988877654 356788899999999999955554443
No 64
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=96.85 E-value=0.0037 Score=57.84 Aligned_cols=104 Identities=27% Similarity=0.265 Sum_probs=63.4
Q ss_pred CCEEEEEcCCCChhhhhcccccccCCCcccCCCCCcchhccccceeecCCCccccccccCCCCcccChHHHHHHHHHHHH
Q 012237 67 WPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLM 146 (467)
Q Consensus 67 ~PlilWlnGGPG~SS~~~g~f~E~GP~~~~l~~n~~sW~~~anvlfiDqPvGtGFSy~~~~~~~~~~~~~~a~d~~~fL~ 146 (467)
.|.+++++|+|+++..+. ...+. +...... .+++.+|+| |.|.|. .. ..+....+.++..+++
T Consensus 21 ~~~i~~~hg~~~~~~~~~-~~~~~------~~~~~~~----~~~~~~d~~-g~g~s~-~~----~~~~~~~~~~~~~~~~ 83 (282)
T COG0596 21 GPPLVLLHGFPGSSSVWR-PVFKV------LPALAAR----YRVIAPDLR-GHGRSD-PA----GYSLSAYADDLAALLD 83 (282)
T ss_pred CCeEEEeCCCCCchhhhH-HHHHH------hhccccc----eEEEEeccc-CCCCCC-cc----cccHHHHHHHHHHHHH
Confidence 379999999999998742 20000 0001111 899999999 999996 11 1112222555554444
Q ss_pred HHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCCCCC
Q 012237 147 ELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWIS 203 (467)
Q Consensus 147 ~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg~i~ 203 (467)
.+...++++.|+|+||..+-.++.+..+ .++++++-++...
T Consensus 84 -------~~~~~~~~l~G~S~Gg~~~~~~~~~~p~---------~~~~~v~~~~~~~ 124 (282)
T COG0596 84 -------ALGLEKVVLVGHSMGGAVALALALRHPD---------RVRGLVLIGPAPP 124 (282)
T ss_pred -------HhCCCceEEEEecccHHHHHHHHHhcch---------hhheeeEecCCCC
Confidence 2223449999999998766666654322 5777777665554
No 65
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=96.81 E-value=0.014 Score=55.81 Aligned_cols=162 Identities=19% Similarity=0.257 Sum_probs=89.4
Q ss_pred hhHHHHHHHHHHhhhhcCcccccccCCCCCCCceeeeeEeCCCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhh
Q 012237 4 LCGFVATLLFLVSLLFNGGAAARALNKNQDASEEWGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVG 83 (467)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sGyv~v~~~~~lFywf~es~~~~~~~~~~~PlilWlnGGPG~SS~~ 83 (467)
++..+++|..|..+.+.|+.-++-.. +...-+-+.+++. ..-||+|.-. .-|+. +||||.|+|+-|..+-.
T Consensus 7 ~~R~~~~l~~la~~~~~~sg~~~~a~----~~~~~~s~~~~g~-~r~y~l~vP~---g~~~~-apLvv~LHG~~~sgag~ 77 (312)
T COG3509 7 LARLVLLLAVLAVAAAACSGHAALAR----FGSSVASFDVNGL-KRSYRLYVPP---GLPSG-APLVVVLHGSGGSGAGQ 77 (312)
T ss_pred hHHHHHHHHHHHHhhcccchhhhhhh----ccCCccccccCCC-ccceEEEcCC---CCCCC-CCEEEEEecCCCChHHh
Confidence 44446667777777777766555222 2233344555543 6667777632 34544 49999999987766542
Q ss_pred cccccccCCCcccCCCCCcchhcccc-----ceeecC------CCccccccccCCCCcccChHHHHHHHHHHHHHHHHhC
Q 012237 84 IGNFEEVGPFDTYLKPRNSTWLKKAD-----LLFVDN------PVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKN 152 (467)
Q Consensus 84 ~g~f~E~GP~~~~l~~n~~sW~~~an-----vlfiDq------PvGtGFSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~f 152 (467)
. +-..|++.|. |+|-|+ |-+.|-++...+ .....++++ .|.+.+.....+|
T Consensus 78 ~---------------~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p~~--~~~g~ddVg-flr~lva~l~~~~ 139 (312)
T COG3509 78 L---------------HGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFGPAD--RRRGVDDVG-FLRALVAKLVNEY 139 (312)
T ss_pred h---------------cccchhhhhcccCcEEECcCccccccCCCcccccCCccc--ccCCccHHH-HHHHHHHHHHHhc
Confidence 1 3345666554 455542 334454433221 122233332 2334444444433
Q ss_pred cccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCCCC
Q 012237 153 EILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWI 202 (467)
Q Consensus 153 p~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg~i 202 (467)
......+||+|=|=||..+-.++-.-.+ -+.++++-.|..
T Consensus 140 -gidp~RVyvtGlS~GG~Ma~~lac~~p~---------~faa~A~VAg~~ 179 (312)
T COG3509 140 -GIDPARVYVTGLSNGGRMANRLACEYPD---------IFAAIAPVAGLL 179 (312)
T ss_pred -CcCcceEEEEeeCcHHHHHHHHHhcCcc---------cccceeeeeccc
Confidence 2335689999999999877766644222 356666644444
No 66
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=96.80 E-value=0.028 Score=54.73 Aligned_cols=53 Identities=25% Similarity=0.269 Sum_probs=40.0
Q ss_pred cceeecCCCccccccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccCc
Q 012237 109 DLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGG 169 (467)
Q Consensus 109 nvlfiDqPvGtGFSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG 169 (467)
-+.-||.- -.|+|-.. .+.+-+..|+|+..|+..+-. .++..+..|.|+|.||
T Consensus 82 ~v~~vd~R-nHG~Sp~~----~~h~~~~ma~dv~~Fi~~v~~---~~~~~~~~l~GHsmGG 134 (315)
T KOG2382|consen 82 DVYAVDVR-NHGSSPKI----TVHNYEAMAEDVKLFIDGVGG---STRLDPVVLLGHSMGG 134 (315)
T ss_pred ceEEEecc-cCCCCccc----cccCHHHHHHHHHHHHHHccc---ccccCCceecccCcch
Confidence 56667766 77888533 355678889998888876643 3567899999999999
No 67
>PRK10566 esterase; Provisional
Probab=96.79 E-value=0.0064 Score=57.64 Aligned_cols=95 Identities=17% Similarity=0.229 Sum_probs=57.8
Q ss_pred CCEEEEEcCCCChhhhhcccccccCCCcccCCCCCcchhc-cccceeecCCCccccccccCCCCcc----cChHHHHHHH
Q 012237 67 WPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLK-KADLLFVDNPVGTGYSYVEDNSSFV----KNDVEAANDL 141 (467)
Q Consensus 67 ~PlilWlnGGPG~SS~~~g~f~E~GP~~~~l~~n~~sW~~-~anvlfiDqPvGtGFSy~~~~~~~~----~~~~~~a~d~ 141 (467)
.|+||.++|++|.... ...+ .-.+.+ -.+++.+|.| |.|-|+........ .......+++
T Consensus 27 ~p~vv~~HG~~~~~~~-~~~~-------------~~~l~~~G~~v~~~d~~-g~G~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (249)
T PRK10566 27 LPTVFFYHGFTSSKLV-YSYF-------------AVALAQAGFRVIMPDAP-MHGARFSGDEARRLNHFWQILLQNMQEF 91 (249)
T ss_pred CCEEEEeCCCCcccch-HHHH-------------HHHHHhCCCEEEEecCC-cccccCCCccccchhhHHHHHHHHHHHH
Confidence 4999999999887654 2111 123444 3789999999 88876532211100 0012334555
Q ss_pred HHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHH
Q 012237 142 TTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGL 177 (467)
Q Consensus 142 ~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~ 177 (467)
..++ .++...+.....+++|+|+|+||..+..++.
T Consensus 92 ~~~~-~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~ 126 (249)
T PRK10566 92 PTLR-AAIREEGWLLDDRLAVGGASMGGMTALGIMA 126 (249)
T ss_pred HHHH-HHHHhcCCcCccceeEEeecccHHHHHHHHH
Confidence 4444 3444444445678999999999988776654
No 68
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=96.72 E-value=0.012 Score=57.12 Aligned_cols=41 Identities=22% Similarity=0.250 Sum_probs=29.6
Q ss_pred cCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCCCCCc
Q 012237 155 LQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISP 204 (467)
Q Consensus 155 ~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg~i~p 204 (467)
....+++|+|.|+||..+-.++.+-.+ .+++++..+|+.++
T Consensus 135 ~~~~~~~~~G~S~GG~~a~~~a~~~p~---------~~~~~~~~~~~~~~ 175 (275)
T TIGR02821 135 LDGERQGITGHSMGGHGALVIALKNPD---------RFKSVSAFAPIVAP 175 (275)
T ss_pred CCCCceEEEEEChhHHHHHHHHHhCcc---------cceEEEEECCccCc
Confidence 345689999999999776666644211 46888888888765
No 69
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.68 E-value=0.0023 Score=62.20 Aligned_cols=107 Identities=21% Similarity=0.262 Sum_probs=65.6
Q ss_pred CCEEEEEcCCCChh-hhhcccccccCCCcccCCCCCcchh--ccccceeecCCCccccccccCCCCcccChHHHHHHHHH
Q 012237 67 WPIILWLQGGPGAS-GVGIGNFEEVGPFDTYLKPRNSTWL--KKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTT 143 (467)
Q Consensus 67 ~PlilWlnGGPG~S-S~~~g~f~E~GP~~~~l~~n~~sW~--~~anvlfiDqPvGtGFSy~~~~~~~~~~~~~~a~d~~~ 143 (467)
.|++|+++|-.|.. ..+.-.+ ...|. ...|++.||-+.+..-.|. ....+...+++++..
T Consensus 36 ~p~vilIHG~~~~~~~~~~~~l-------------~~~ll~~~~~nVi~vD~~~~~~~~y~----~a~~~~~~v~~~la~ 98 (275)
T cd00707 36 RPTRFIIHGWTSSGEESWISDL-------------RKAYLSRGDYNVIVVDWGRGANPNYP----QAVNNTRVVGAELAK 98 (275)
T ss_pred CCcEEEEcCCCCCCCCcHHHHH-------------HHHHHhcCCCEEEEEECccccccChH----HHHHhHHHHHHHHHH
Confidence 48999999977654 2211000 01122 4589999998844111111 112344566777777
Q ss_pred HHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCC
Q 012237 144 LLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDS 200 (467)
Q Consensus 144 fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg 200 (467)
+|+...+.. .....+++|.|+|.||+.+-.+|.+..+ +++.|+.-+|
T Consensus 99 ~l~~L~~~~-g~~~~~i~lIGhSlGa~vAg~~a~~~~~---------~v~~iv~LDP 145 (275)
T cd00707 99 FLDFLVDNT-GLSLENVHLIGHSLGAHVAGFAGKRLNG---------KLGRITGLDP 145 (275)
T ss_pred HHHHHHHhc-CCChHHEEEEEecHHHHHHHHHHHHhcC---------ccceeEEecC
Confidence 777665532 2334689999999999988888765422 5788888444
No 70
>PLN02442 S-formylglutathione hydrolase
Probab=96.66 E-value=0.01 Score=57.92 Aligned_cols=56 Identities=29% Similarity=0.322 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCCCCCc
Q 012237 137 AANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISP 204 (467)
Q Consensus 137 ~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg~i~p 204 (467)
..+++...+..++.. ....+++|+|.|+||+-+-.++.+-.+ .+++++..+|..+|
T Consensus 125 ~~~~l~~~i~~~~~~---~~~~~~~i~G~S~GG~~a~~~a~~~p~---------~~~~~~~~~~~~~~ 180 (283)
T PLN02442 125 VVKELPKLLSDNFDQ---LDTSRASIFGHSMGGHGALTIYLKNPD---------KYKSVSAFAPIANP 180 (283)
T ss_pred HHHHHHHHHHHHHHh---cCCCceEEEEEChhHHHHHHHHHhCch---------hEEEEEEECCccCc
Confidence 345555556665543 345679999999999766666543211 47888888888775
No 71
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=96.54 E-value=0.0069 Score=58.71 Aligned_cols=108 Identities=18% Similarity=0.165 Sum_probs=67.8
Q ss_pred CEEEEEcCCCChhhhhcccccccCCCcccCCCCCcchhc-cccceeecCCCccccccccCCCCcccChHHHHHHHHHHHH
Q 012237 68 PIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLK-KADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLM 146 (467)
Q Consensus 68 PlilWlnGGPG~SS~~~g~f~E~GP~~~~l~~n~~sW~~-~anvlfiDqPvGtGFSy~~~~~~~~~~~~~~a~d~~~fL~ 146 (467)
|-+|.++||++...-..-.+..+ --.+.+ -.+++-+|.| |.|.|.... .+-++..+|+..+++
T Consensus 27 ~~vv~i~gg~~~~~g~~~~~~~l----------a~~l~~~G~~v~~~Dl~-G~G~S~~~~-----~~~~~~~~d~~~~~~ 90 (274)
T TIGR03100 27 TGVLIVVGGPQYRVGSHRQFVLL----------ARRLAEAGFPVLRFDYR-GMGDSEGEN-----LGFEGIDADIAAAID 90 (274)
T ss_pred CeEEEEeCCccccCCchhHHHHH----------HHHHHHCCCEEEEeCCC-CCCCCCCCC-----CCHHHHHHHHHHHHH
Confidence 67788889986432100000000 012333 3799999999 999985321 244556777777777
Q ss_pred HHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCCCCC
Q 012237 147 ELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWIS 203 (467)
Q Consensus 147 ~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg~i~ 203 (467)
.+-+..|.+ .+++++|+|.||..+-.+|.. .-.++|+++-||++.
T Consensus 91 ~l~~~~~g~--~~i~l~G~S~Gg~~a~~~a~~----------~~~v~~lil~~p~~~ 135 (274)
T TIGR03100 91 AFREAAPHL--RRIVAWGLCDAASAALLYAPA----------DLRVAGLVLLNPWVR 135 (274)
T ss_pred HHHhhCCCC--CcEEEEEECHHHHHHHHHhhh----------CCCccEEEEECCccC
Confidence 655555543 469999999999655544421 016999999888753
No 72
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=96.49 E-value=0.022 Score=56.58 Aligned_cols=142 Identities=18% Similarity=0.244 Sum_probs=88.5
Q ss_pred eeEeCCCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhcccccccCCCcccCCCCCcchh-ccccceeecCCCc
Q 012237 40 YVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWL-KKADLLFVDNPVG 118 (467)
Q Consensus 40 yv~v~~~~~lFywf~es~~~~~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~l~~n~~sW~-~~anvlfiDqPvG 118 (467)
=|.+.+...++-+.|..+. ..+.+.+|++||++||--|-+.-. . | ...+-.++. +.+|.+-| .
T Consensus 65 dv~~~~~~~l~vRly~P~~--~~~~~~~p~lvyfHGGGf~~~S~~--~----~----~y~~~~~~~a~~~~~vvv----S 128 (336)
T KOG1515|consen 65 DVTIDPFTNLPVRLYRPTS--SSSETKLPVLVYFHGGGFCLGSAN--S----P----AYDSFCTRLAAELNCVVV----S 128 (336)
T ss_pred eeEecCCCCeEEEEEcCCC--CCcccCceEEEEEeCCccEeCCCC--C----c----hhHHHHHHHHHHcCeEEE----e
Confidence 3444555789999998642 223144599999999988876410 0 0 000112233 55555533 3
Q ss_pred cccccccCCCCcccChHHHHHHHHHHHHH-HHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEee
Q 012237 119 TGYSYVEDNSSFVKNDVEAANDLTTLLME-LFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVAL 197 (467)
Q Consensus 119 tGFSy~~~~~~~~~~~~~~a~d~~~fL~~-f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~I 197 (467)
++|=-+. ++.++..-++.-..+..++++ |....-++. .++|+|.|-||..+-.+|+++.+.- ..++.|+|+++
T Consensus 129 VdYRLAP-Eh~~Pa~y~D~~~Al~w~~~~~~~~~~~D~~--rv~l~GDSaGGNia~~va~r~~~~~---~~~~ki~g~il 202 (336)
T KOG1515|consen 129 VDYRLAP-EHPFPAAYDDGWAALKWVLKNSWLKLGADPS--RVFLAGDSAGGNIAHVVAQRAADEK---LSKPKIKGQIL 202 (336)
T ss_pred cCcccCC-CCCCCccchHHHHHHHHHHHhHHHHhCCCcc--cEEEEccCccHHHHHHHHHHHhhcc---CCCcceEEEEE
Confidence 3433332 344555566666656667776 887666653 3999999999999999998877531 34678999999
Q ss_pred cCCCCC
Q 012237 198 GDSWIS 203 (467)
Q Consensus 198 GNg~i~ 203 (467)
--|+..
T Consensus 203 i~P~~~ 208 (336)
T KOG1515|consen 203 IYPFFQ 208 (336)
T ss_pred EecccC
Confidence 555543
No 73
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=96.32 E-value=0.014 Score=60.00 Aligned_cols=80 Identities=13% Similarity=0.069 Sum_probs=52.8
Q ss_pred cccceeecCCCccccccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcC
Q 012237 107 KADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAG 186 (467)
Q Consensus 107 ~anvlfiDqPvGtGFSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~ 186 (467)
..|||-+|-| |-|-|.... ...+...+|.++.++++...+.. .+.-.+++|.|+|.|||.+-.++.+..
T Consensus 73 d~nVI~VDw~-g~g~s~y~~---a~~~t~~vg~~la~lI~~L~~~~-gl~l~~VhLIGHSLGAhIAg~ag~~~p------ 141 (442)
T TIGR03230 73 SANVIVVDWL-SRAQQHYPT---SAAYTKLVGKDVAKFVNWMQEEF-NYPWDNVHLLGYSLGAHVAGIAGSLTK------ 141 (442)
T ss_pred CCEEEEEECC-CcCCCCCcc---ccccHHHHHHHHHHHHHHHHHhh-CCCCCcEEEEEECHHHHHHHHHHHhCC------
Confidence 4799999999 555442111 12344677888888887554332 344578999999999998887765421
Q ss_pred cceeeeeeEeecCC
Q 012237 187 KLKLKLGGVALGDS 200 (467)
Q Consensus 187 ~~~inLkGi~IGNg 200 (467)
-.|.+|++-||
T Consensus 142 ---~rV~rItgLDP 152 (442)
T TIGR03230 142 ---HKVNRITGLDP 152 (442)
T ss_pred ---cceeEEEEEcC
Confidence 14667776554
No 74
>PRK13604 luxD acyl transferase; Provisional
Probab=96.30 E-value=0.31 Score=47.74 Aligned_cols=129 Identities=15% Similarity=0.067 Sum_probs=72.2
Q ss_pred eEeCCCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhcccccccCCCcccCCCCCcchhccccceeecCCCccc
Q 012237 41 VEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTG 120 (467)
Q Consensus 41 v~v~~~~~lFywf~es~~~~~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~l~~n~~sW~~~anvlfiDqPvGtG 120 (467)
+.++++..|.=|+.+.++ .++.+ .|+||..+| .|+....+- ..-.+=+.+-.|+|=.|.--|.|
T Consensus 14 ~~~~dG~~L~Gwl~~P~~--~~~~~-~~~vIi~HG-f~~~~~~~~------------~~A~~La~~G~~vLrfD~rg~~G 77 (307)
T PRK13604 14 ICLENGQSIRVWETLPKE--NSPKK-NNTILIASG-FARRMDHFA------------GLAEYLSSNGFHVIRYDSLHHVG 77 (307)
T ss_pred EEcCCCCEEEEEEEcCcc--cCCCC-CCEEEEeCC-CCCChHHHH------------HHHHHHHHCCCEEEEecCCCCCC
Confidence 344455567777766431 12323 388887774 444421110 11234567788999999875679
Q ss_pred cccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCC
Q 012237 121 YSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDS 200 (467)
Q Consensus 121 FSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg 200 (467)
-|-++-.. ...+. ...|+..++. |++.. ...++.|.|+|.||.-+...|. ..+++++++..|
T Consensus 78 eS~G~~~~-~t~s~--g~~Dl~aaid-~lk~~---~~~~I~LiG~SmGgava~~~A~-----------~~~v~~lI~~sp 139 (307)
T PRK13604 78 LSSGTIDE-FTMSI--GKNSLLTVVD-WLNTR---GINNLGLIAASLSARIAYEVIN-----------EIDLSFLITAVG 139 (307)
T ss_pred CCCCcccc-Ccccc--cHHHHHHHHH-HHHhc---CCCceEEEEECHHHHHHHHHhc-----------CCCCCEEEEcCC
Confidence 88543221 11111 2455533332 44332 1357999999999976533332 125888898777
Q ss_pred CCC
Q 012237 201 WIS 203 (467)
Q Consensus 201 ~i~ 203 (467)
+.+
T Consensus 140 ~~~ 142 (307)
T PRK13604 140 VVN 142 (307)
T ss_pred ccc
Confidence 765
No 75
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=95.89 E-value=0.031 Score=59.85 Aligned_cols=132 Identities=16% Similarity=0.117 Sum_probs=80.1
Q ss_pred eCCCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhcccccccCCCcccCCCCCcchh-ccccceeecCCCcccc
Q 012237 43 VRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWL-KKADLLFVDNPVGTGY 121 (467)
Q Consensus 43 v~~~~~lFywf~es~~~~~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~l~~n~~sW~-~~anvlfiDqPvGtGF 121 (467)
.+++..|+...|.-+ ++ +..|+||.++|-...+.. ...+ + .....-|. +-..++-+|.+ |+|.
T Consensus 3 ~~DG~~L~~~~~~P~----~~-~~~P~Il~~~gyg~~~~~-~~~~-~--------~~~~~~l~~~Gy~vv~~D~R-G~g~ 66 (550)
T TIGR00976 3 MRDGTRLAIDVYRPA----GG-GPVPVILSRTPYGKDAGL-RWGL-D--------KTEPAWFVAQGYAVVIQDTR-GRGA 66 (550)
T ss_pred CCCCCEEEEEEEecC----CC-CCCCEEEEecCCCCchhh-cccc-c--------cccHHHHHhCCcEEEEEecc-cccc
Confidence 345567887766421 22 235999999975443221 0000 0 00111233 46889999988 9999
Q ss_pred ccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCCC
Q 012237 122 SYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSW 201 (467)
Q Consensus 122 Sy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg~ 201 (467)
|.+... ..+ ...++|+..+++ |+.+.|. -+.++.++|.||||..+-.+|.. .+-.|++++.-+++
T Consensus 67 S~g~~~---~~~-~~~~~D~~~~i~-~l~~q~~-~~~~v~~~G~S~GG~~a~~~a~~---------~~~~l~aiv~~~~~ 131 (550)
T TIGR00976 67 SEGEFD---LLG-SDEAADGYDLVD-WIAKQPW-CDGNVGMLGVSYLAVTQLLAAVL---------QPPALRAIAPQEGV 131 (550)
T ss_pred CCCceE---ecC-cccchHHHHHHH-HHHhCCC-CCCcEEEEEeChHHHHHHHHhcc---------CCCceeEEeecCcc
Confidence 975421 111 456677777765 6666553 34689999999999765555532 01269999998887
Q ss_pred CCcc
Q 012237 202 ISPE 205 (467)
Q Consensus 202 i~p~ 205 (467)
.|..
T Consensus 132 ~d~~ 135 (550)
T TIGR00976 132 WDLY 135 (550)
T ss_pred cchh
Confidence 7643
No 76
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=95.78 E-value=0.031 Score=52.18 Aligned_cols=101 Identities=17% Similarity=0.180 Sum_probs=66.3
Q ss_pred EEEEEcCCCChhhhhcccccccCCCcccCCCCCcchhc-cccceeecCCCccccccccCCCCcccChHHHHHHHHHHHHH
Q 012237 69 IILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLK-KADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLME 147 (467)
Q Consensus 69 lilWlnGGPG~SS~~~g~f~E~GP~~~~l~~n~~sW~~-~anvlfiDqPvGtGFSy~~~~~~~~~~~~~~a~d~~~fL~~ 147 (467)
.|+++.+|=|.++....+.. ...+ ..++..|+.| |-+ .......+-++.|+...+.++
T Consensus 2 ~lf~~p~~gG~~~~y~~la~--------------~l~~~~~~v~~i~~~-~~~-----~~~~~~~si~~la~~y~~~I~- 60 (229)
T PF00975_consen 2 PLFCFPPAGGSASSYRPLAR--------------ALPDDVIGVYGIEYP-GRG-----DDEPPPDSIEELASRYAEAIR- 60 (229)
T ss_dssp EEEEESSTTCSGGGGHHHHH--------------HHTTTEEEEEEECST-TSC-----TTSHEESSHHHHHHHHHHHHH-
T ss_pred eEEEEcCCccCHHHHHHHHH--------------hCCCCeEEEEEEecC-CCC-----CCCCCCCCHHHHHHHHHHHhh-
Confidence 57899999886665211111 1222 4778999988 655 123346688888987766665
Q ss_pred HHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCCC
Q 012237 148 LFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSW 201 (467)
Q Consensus 148 f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg~ 201 (467)
...|+ -|++|+|.|+||..+=.+|.++.+. | .....+++-|+.
T Consensus 61 --~~~~~---gp~~L~G~S~Gg~lA~E~A~~Le~~---G---~~v~~l~liD~~ 103 (229)
T PF00975_consen 61 --ARQPE---GPYVLAGWSFGGILAFEMARQLEEA---G---EEVSRLILIDSP 103 (229)
T ss_dssp --HHTSS---SSEEEEEETHHHHHHHHHHHHHHHT---T----SESEEEEESCS
T ss_pred --hhCCC---CCeeehccCccHHHHHHHHHHHHHh---h---hccCceEEecCC
Confidence 33333 3999999999997777777666442 2 257888886654
No 77
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=95.65 E-value=0.21 Score=55.48 Aligned_cols=85 Identities=13% Similarity=0.106 Sum_probs=54.5
Q ss_pred ccccceeecCCCccccccccCCCCcccChHHHHHHHHHHHHHHHHhCc--------------ccCCCCEEEEecccCcch
Q 012237 106 KKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNE--------------ILQKSPLFIVAESYGGKF 171 (467)
Q Consensus 106 ~~anvlfiDqPvGtGFSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp--------------~~~~~~~yi~GESYgG~y 171 (467)
.-++++++|.+ |+|-|.+... . -..+-.+|..+.+. |+.... .+-+-++-++|.||+|..
T Consensus 278 rGYaVV~~D~R-Gtg~SeG~~~---~-~~~~E~~D~~~vIe-Wl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G~~ 351 (767)
T PRK05371 278 RGFAVVYVSGI-GTRGSDGCPT---T-GDYQEIESMKAVID-WLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLGTL 351 (767)
T ss_pred CCeEEEEEcCC-CCCCCCCcCc---c-CCHHHHHHHHHHHH-HHhhCCccccccccccccccCCCCCeeEEEEEcHHHHH
Confidence 46889999977 9999976522 1 11233344444443 555321 123568999999999977
Q ss_pred HHHHHHHHHHHHHcCcceeeeeeEeecCCCCCcc
Q 012237 172 AATLGLAAVKAIEAGKLKLKLGGVALGDSWISPE 205 (467)
Q Consensus 172 vP~lA~~i~~~~~~~~~~inLkGi~IGNg~i~p~ 205 (467)
.-.+|..- .-.||.|+...|+.+..
T Consensus 352 ~~~aAa~~---------pp~LkAIVp~a~is~~y 376 (767)
T PRK05371 352 PNAVATTG---------VEGLETIIPEAAISSWY 376 (767)
T ss_pred HHHHHhhC---------CCcceEEEeeCCCCcHH
Confidence 66665431 12699999887777653
No 78
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=95.58 E-value=0.015 Score=58.85 Aligned_cols=81 Identities=19% Similarity=0.256 Sum_probs=53.3
Q ss_pred ccccceeecCCCccccccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHc
Q 012237 106 KKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEA 185 (467)
Q Consensus 106 ~~anvlfiDqPvGtGFSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~ 185 (467)
.-.+||=||-| |||+|.... ...+ .+.++..+-+|+..-|+.-...+.++|-|+||.|++.+|.. + .
T Consensus 217 rGiA~LtvDmP-G~G~s~~~~---l~~D----~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~l--e---~ 283 (411)
T PF06500_consen 217 RGIAMLTVDMP-GQGESPKWP---LTQD----SSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAAL--E---D 283 (411)
T ss_dssp CT-EEEEE--T-TSGGGTTT----S-S-----CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHH--T---T
T ss_pred CCCEEEEEccC-CCcccccCC---CCcC----HHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHh--c---c
Confidence 44579999999 999995321 1111 23466777788888999888899999999999999988842 1 1
Q ss_pred CcceeeeeeEeecCCCCC
Q 012237 186 GKLKLKLGGVALGDSWIS 203 (467)
Q Consensus 186 ~~~~inLkGi~IGNg~i~ 203 (467)
-.||+++.-.|.++
T Consensus 284 ----~RlkavV~~Ga~vh 297 (411)
T PF06500_consen 284 ----PRLKAVVALGAPVH 297 (411)
T ss_dssp ----TT-SEEEEES---S
T ss_pred ----cceeeEeeeCchHh
Confidence 16899777555554
No 79
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=95.53 E-value=0.05 Score=44.36 Aligned_cols=64 Identities=17% Similarity=0.134 Sum_probs=53.0
Q ss_pred ceEEEEeccCCcCCCchhHHHHHHHcCcccccccccCCCeeeEeCCCceeeeEEEEEcCEEEEEEcCCcccccCCCCcHH
Q 012237 366 VNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFQVPVDQPCI 445 (467)
Q Consensus 366 irVLiy~Gd~D~i~n~~g~~~~i~~L~W~g~~~f~~~~~~pw~~~~~~~~~G~~k~~~nltf~~V~~AGHm~vP~dqP~~ 445 (467)
.+||+.+|..|-++|+.++++..+.|. +-..+++.++||- +-...-.-
T Consensus 35 ~piL~l~~~~Dp~TP~~~a~~~~~~l~-------------------------------~s~lvt~~g~gHg-~~~~~s~C 82 (103)
T PF08386_consen 35 PPILVLGGTHDPVTPYEGARAMAARLP-------------------------------GSRLVTVDGAGHG-VYAGGSPC 82 (103)
T ss_pred CCEEEEecCcCCCCcHHHHHHHHHHCC-------------------------------CceEEEEeccCcc-eecCCChH
Confidence 899999999999999999999999987 2245889999999 87544456
Q ss_pred HHHHHHHHhcCCCccc
Q 012237 446 ALNMLAAMTDSPASAS 461 (467)
Q Consensus 446 a~~mi~~fl~~~~~~~ 461 (467)
+.+++++||.....|.
T Consensus 83 ~~~~v~~yl~~G~lP~ 98 (103)
T PF08386_consen 83 VDKAVDDYLLDGTLPA 98 (103)
T ss_pred HHHHHHHHHHcCCCCC
Confidence 7889999988665554
No 80
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=95.28 E-value=0.074 Score=51.35 Aligned_cols=116 Identities=20% Similarity=0.305 Sum_probs=73.5
Q ss_pred CCEEEEEcCCCChhhhhcccccccCCCcccCCCCCcchhccccceeecCCCccccccccCC-----CCcccChHHHHHHH
Q 012237 67 WPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDN-----SSFVKNDVEAANDL 141 (467)
Q Consensus 67 ~PlilWlnGGPG~SS~~~g~f~E~GP~~~~l~~n~~sW~~~anvlfiDqPvGtGFSy~~~~-----~~~~~~~~~~a~d~ 141 (467)
+++++|+-|-||.-.- +--|.+. +..+ .+....++=+... |||..... +....+.++..+.-
T Consensus 2 ~~li~~IPGNPGlv~f-Y~~Fl~~------L~~~---l~~~~~i~~ish~---Gh~~~~~~~~~~~~~~~~sL~~QI~hk 68 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEF-YEEFLSA------LYEK---LNPQFEILGISHA---GHSTSPSNSKFSPNGRLFSLQDQIEHK 68 (266)
T ss_pred cEEEEEECCCCChHHH-HHHHHHH------HHHh---CCCCCeeEEecCC---CCcCCcccccccCCCCccCHHHHHHHH
Confidence 4899999999999986 5443211 1111 0344445544433 55544332 23456788888889
Q ss_pred HHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCCCC
Q 012237 142 TTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWI 202 (467)
Q Consensus 142 ~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg~i 202 (467)
.+||+++....+ ..+.+++|.|+|-|. +++.+|+++.. ....+++++++-=|.+
T Consensus 69 ~~~i~~~~~~~~-~~~~~liLiGHSIGa----yi~levl~r~~--~~~~~V~~~~lLfPTi 122 (266)
T PF10230_consen 69 IDFIKELIPQKN-KPNVKLILIGHSIGA----YIALEVLKRLP--DLKFRVKKVILLFPTI 122 (266)
T ss_pred HHHHHHHhhhhc-CCCCcEEEEeCcHHH----HHHHHHHHhcc--ccCCceeEEEEeCCcc
Confidence 999999988654 246899999999999 56666666543 2234677666633333
No 81
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=95.10 E-value=0.059 Score=59.64 Aligned_cols=146 Identities=23% Similarity=0.290 Sum_probs=77.4
Q ss_pred ceeeeeEeCCCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhcccccccCCCcccCCCCCcchhc-cccceeec
Q 012237 36 EEWGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLK-KADLLFVD 114 (467)
Q Consensus 36 ~~sGyv~v~~~~~lFywf~es~~~~~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~l~~n~~sW~~-~anvlfiD 114 (467)
.+.+-+.+ ++....+++.-.+. -++.++-||+++..||||.-+. .+.|. +..+.+.+.+ -+=++-||
T Consensus 498 ~~~~~i~~-~~~~~~~~~~lP~~--~~~~~kyPllv~~yGGP~sq~v-~~~~~--------~~~~~~~~s~~g~~v~~vd 565 (755)
T KOG2100|consen 498 VEFGKIEI-DGITANAILILPPN--FDPSKKYPLLVVVYGGPGSQSV-TSKFS--------VDWNEVVVSSRGFAVLQVD 565 (755)
T ss_pred ceeEEEEe-ccEEEEEEEecCCC--CCCCCCCCEEEEecCCCCccee-eeeEE--------ecHHHHhhccCCeEEEEEc
Confidence 34455555 33466677765432 3555667999999999993332 22221 1113333321 24467788
Q ss_pred CCCccccccccCCCCccc--ChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeee
Q 012237 115 NPVGTGYSYVEDNSSFVK--NDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKL 192 (467)
Q Consensus 115 qPvGtGFSy~~~~~~~~~--~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inL 192 (467)
+.|+|+.--.-...... .+.+ .+|.....+.+.+.+ -.-...+.|+|-|||| .++..++..- .+. -+
T Consensus 566 -~RGs~~~G~~~~~~~~~~lG~~e-v~D~~~~~~~~~~~~-~iD~~ri~i~GwSyGG----y~t~~~l~~~-~~~---~f 634 (755)
T KOG2100|consen 566 -GRGSGGYGWDFRSALPRNLGDVE-VKDQIEAVKKVLKLP-FIDRSRVAIWGWSYGG----YLTLKLLESD-PGD---VF 634 (755)
T ss_pred -CCCcCCcchhHHHHhhhhcCCcc-hHHHHHHHHHHHhcc-cccHHHeEEeccChHH----HHHHHHhhhC-cCc---eE
Confidence 66888653221000111 1112 344445555555544 3335679999999999 5555555431 111 35
Q ss_pred eeEeecCCCCCc
Q 012237 193 GGVALGDSWISP 204 (467)
Q Consensus 193 kGi~IGNg~i~p 204 (467)
|--+.-+|.+|.
T Consensus 635 kcgvavaPVtd~ 646 (755)
T KOG2100|consen 635 KCGVAVAPVTDW 646 (755)
T ss_pred EEEEEecceeee
Confidence 543555666664
No 82
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=95.04 E-value=0.099 Score=47.87 Aligned_cols=109 Identities=21% Similarity=0.300 Sum_probs=73.9
Q ss_pred CCEEEEEcCCCChhhhhcccccccCCCcccCCCCCcchhccccceeecCCCccccccccCCCCcccChHHHHHHHHHHHH
Q 012237 67 WPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLM 146 (467)
Q Consensus 67 ~PlilWlnGGPG~SS~~~g~f~E~GP~~~~l~~n~~sW~~~anvlfiDqPvGtGFSy~~~~~~~~~~~~~~a~d~~~fL~ 146 (467)
+|.+|+++|.-|- | |-+.-+ .+-.=-+-..||+-+|-. |-|-|.+...+.--..|.+++-
T Consensus 78 ~pTlLyfh~NAGN--m--Ghr~~i--------~~~fy~~l~mnv~ivsYR-GYG~S~GspsE~GL~lDs~avl------- 137 (300)
T KOG4391|consen 78 RPTLLYFHANAGN--M--GHRLPI--------ARVFYVNLKMNVLIVSYR-GYGKSEGSPSEEGLKLDSEAVL------- 137 (300)
T ss_pred CceEEEEccCCCc--c--cchhhH--------HHHHHHHcCceEEEEEee-ccccCCCCccccceeccHHHHH-------
Confidence 4999999987553 2 332210 011112346788999977 9999987643322334444443
Q ss_pred HHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCCCCCc
Q 012237 147 ELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISP 204 (467)
Q Consensus 147 ~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg~i~p 204 (467)
..+..+|...++++.++|.|-||.-+-.+|.+-.+ .+.++|+-|-+++-
T Consensus 138 dyl~t~~~~dktkivlfGrSlGGAvai~lask~~~---------ri~~~ivENTF~SI 186 (300)
T KOG4391|consen 138 DYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSD---------RISAIIVENTFLSI 186 (300)
T ss_pred HHHhcCccCCcceEEEEecccCCeeEEEeeccchh---------heeeeeeechhccc
Confidence 35567888889999999999999888877765332 68999999988874
No 83
>PLN00021 chlorophyllase
Probab=94.98 E-value=0.078 Score=52.44 Aligned_cols=111 Identities=17% Similarity=0.120 Sum_probs=63.3
Q ss_pred CCEEEEEcCCCChhhhhcccccccCCCcccCCCCCcchhc-cccceeecCCCccccccccCCCCcccChHHHHHHHHHHH
Q 012237 67 WPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLK-KADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLL 145 (467)
Q Consensus 67 ~PlilWlnGGPG~SS~~~g~f~E~GP~~~~l~~n~~sW~~-~anvlfiDqPvGtGFSy~~~~~~~~~~~~~~a~d~~~fL 145 (467)
.|+||+++|+.+.+.. +.-+. + .+.+ -..++.+|.+ | ++... . ..+.+.+.++..++
T Consensus 52 ~PvVv~lHG~~~~~~~-y~~l~------------~-~Las~G~~VvapD~~-g--~~~~~----~-~~~i~d~~~~~~~l 109 (313)
T PLN00021 52 YPVLLFLHGYLLYNSF-YSQLL------------Q-HIASHGFIVVAPQLY-T--LAGPD----G-TDEIKDAAAVINWL 109 (313)
T ss_pred CCEEEEECCCCCCccc-HHHHH------------H-HHHhCCCEEEEecCC-C--cCCCC----c-hhhHHHHHHHHHHH
Confidence 5999999999766544 21111 0 1122 2567888877 4 33211 1 12223355566666
Q ss_pred HHHHHh-Cc---ccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCCCCC
Q 012237 146 MELFNK-NE---ILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWIS 203 (467)
Q Consensus 146 ~~f~~~-fp---~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg~i~ 203 (467)
.+-++. -| +....+++|+|+|.||..+-.+|.+..+. .....+++++.-+++..
T Consensus 110 ~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~----~~~~~v~ali~ldPv~g 167 (313)
T PLN00021 110 SSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAV----SLPLKFSALIGLDPVDG 167 (313)
T ss_pred HhhhhhhcccccccChhheEEEEECcchHHHHHHHhhcccc----ccccceeeEEeeccccc
Confidence 654432 11 22346799999999998877777543221 12246888887676543
No 84
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=94.85 E-value=1.1 Score=47.73 Aligned_cols=85 Identities=9% Similarity=0.024 Sum_probs=50.2
Q ss_pred cccceeecCCCccccccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcC
Q 012237 107 KADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAG 186 (467)
Q Consensus 107 ~anvlfiDqPvGtGFSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~ 186 (467)
-..++-||-+ |.|.|.... .-++-+.+.+.+++..+.+.. ...++++.|.|.||..+......+... +
T Consensus 220 Gf~V~~iDwr-gpg~s~~~~-----~~ddY~~~~i~~al~~v~~~~---g~~kv~lvG~cmGGtl~a~ala~~aa~---~ 287 (532)
T TIGR01838 220 GHTVFVISWR-NPDASQADK-----TFDDYIRDGVIAALEVVEAIT---GEKQVNCVGYCIGGTLLSTALAYLAAR---G 287 (532)
T ss_pred CcEEEEEECC-CCCcccccC-----ChhhhHHHHHHHHHHHHHHhc---CCCCeEEEEECcCcHHHHHHHHHHHHh---C
Confidence 3568888977 888774321 112233344666666655432 357899999999998765422222211 1
Q ss_pred cceeeeeeEeecCCCCCc
Q 012237 187 KLKLKLGGVALGDSWISP 204 (467)
Q Consensus 187 ~~~inLkGi~IGNg~i~p 204 (467)
..-.++++++-+..+|.
T Consensus 288 -~~~rv~slvll~t~~Df 304 (532)
T TIGR01838 288 -DDKRIKSATFFTTLLDF 304 (532)
T ss_pred -CCCccceEEEEecCcCC
Confidence 01157888877766664
No 85
>PRK10162 acetyl esterase; Provisional
Probab=94.80 E-value=0.085 Score=52.33 Aligned_cols=44 Identities=20% Similarity=0.030 Sum_probs=31.3
Q ss_pred CCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCCCCC
Q 012237 157 KSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWIS 203 (467)
Q Consensus 157 ~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg~i~ 203 (467)
..++.|+|+|.||+.+-.++....+. +.....++|+++-.|+++
T Consensus 153 ~~~i~l~G~SaGG~la~~~a~~~~~~---~~~~~~~~~~vl~~p~~~ 196 (318)
T PRK10162 153 MSRIGFAGDSAGAMLALASALWLRDK---QIDCGKVAGVLLWYGLYG 196 (318)
T ss_pred hhHEEEEEECHHHHHHHHHHHHHHhc---CCCccChhheEEECCccC
Confidence 46899999999999888887665332 211235788888777665
No 86
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=94.59 E-value=0.072 Score=45.46 Aligned_cols=94 Identities=18% Similarity=0.262 Sum_probs=59.7
Q ss_pred EEEEEcCCCChhhhhcccccccCCCcccCCCCCcchhc-cccceeecCCCccccccccCCCCcccChHHHHHHHHHHHHH
Q 012237 69 IILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLK-KADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLME 147 (467)
Q Consensus 69 lilWlnGGPG~SS~~~g~f~E~GP~~~~l~~n~~sW~~-~anvlfiDqPvGtGFSy~~~~~~~~~~~~~~a~d~~~fL~~ 147 (467)
+||+++|+.|.+.. +..+. ..+.+ -.+++.+|.| |.|.|.. ...++++++.+.
T Consensus 1 ~vv~~HG~~~~~~~-~~~~~-------------~~l~~~G~~v~~~~~~-~~~~~~~----------~~~~~~~~~~~~- 54 (145)
T PF12695_consen 1 VVVLLHGWGGSRRD-YQPLA-------------EALAEQGYAVVAFDYP-GHGDSDG----------ADAVERVLADIR- 54 (145)
T ss_dssp EEEEECTTTTTTHH-HHHHH-------------HHHHHTTEEEEEESCT-TSTTSHH----------SHHHHHHHHHHH-
T ss_pred CEEEECCCCCCHHH-HHHHH-------------HHHHHCCCEEEEEecC-CCCccch----------hHHHHHHHHHHH-
Confidence 58999999886655 32221 13333 3788999988 7776621 113333333332
Q ss_pred HHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCCCC
Q 012237 148 LFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWI 202 (467)
Q Consensus 148 f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg~i 202 (467)
..++ ..++++|+|.|.||..+..++.+- -.+++++.-+|+.
T Consensus 55 --~~~~--~~~~i~l~G~S~Gg~~a~~~~~~~----------~~v~~~v~~~~~~ 95 (145)
T PF12695_consen 55 --AGYP--DPDRIILIGHSMGGAIAANLAARN----------PRVKAVVLLSPYP 95 (145)
T ss_dssp --HHHC--TCCEEEEEEETHHHHHHHHHHHHS----------TTESEEEEESESS
T ss_pred --hhcC--CCCcEEEEEEccCcHHHHHHhhhc----------cceeEEEEecCcc
Confidence 3233 357999999999998877777531 2688998877753
No 87
>PRK11071 esterase YqiA; Provisional
Probab=94.54 E-value=0.063 Score=48.99 Aligned_cols=54 Identities=9% Similarity=-0.069 Sum_probs=43.2
Q ss_pred CceEEEEeccCCcCCCchhHHHHHHHcCcccccccccCCCeeeEeCCCceeeeEEEEEcCEEEEEEcCCcccccCCCCcH
Q 012237 365 GVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFQVPVDQPC 444 (467)
Q Consensus 365 ~irVLiy~Gd~D~i~n~~g~~~~i~~L~W~g~~~f~~~~~~pw~~~~~~~~~G~~k~~~nltf~~V~~AGHm~vP~dqP~ 444 (467)
..+|+|..|..|-++|+..+.+..++. ..+++.||+|. ....+
T Consensus 136 ~~~v~iihg~~De~V~~~~a~~~~~~~----------------------------------~~~~~~ggdH~---f~~~~ 178 (190)
T PRK11071 136 PDLIWLLQQTGDEVLDYRQAVAYYAAC----------------------------------RQTVEEGGNHA---FVGFE 178 (190)
T ss_pred hhhEEEEEeCCCCcCCHHHHHHHHHhc----------------------------------ceEEECCCCcc---hhhHH
Confidence 468999999999999998887766632 12467999999 46668
Q ss_pred HHHHHHHHHhc
Q 012237 445 IALNMLAAMTD 455 (467)
Q Consensus 445 ~a~~mi~~fl~ 455 (467)
..+..+..|++
T Consensus 179 ~~~~~i~~fl~ 189 (190)
T PRK11071 179 RYFNQIVDFLG 189 (190)
T ss_pred HhHHHHHHHhc
Confidence 99999999975
No 88
>PRK10115 protease 2; Provisional
Probab=94.48 E-value=0.091 Score=57.75 Aligned_cols=137 Identities=14% Similarity=-0.005 Sum_probs=72.3
Q ss_pred CCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhcccccccCCCcccCCCCCcchhccccceeecCCC-cccccc
Q 012237 45 PKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPV-GTGYSY 123 (467)
Q Consensus 45 ~~~~lFywf~es~~~~~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~l~~n~~sW~~~anvlfiDqPv-GtGFSy 123 (467)
++..+-.|++..+.. ... ...|+||+.+||||.+.. -++.. .-.+|...-=++.+=.+- |+||-.
T Consensus 425 DG~~Ip~~l~~~~~~-~~~-~~~P~ll~~hGg~~~~~~-p~f~~-----------~~~~l~~rG~~v~~~n~RGs~g~G~ 490 (686)
T PRK10115 425 DGVEVPVSLVYHRKH-FRK-GHNPLLVYGYGSYGASID-ADFSF-----------SRLSLLDRGFVYAIVHVRGGGELGQ 490 (686)
T ss_pred CCCEEEEEEEEECCC-CCC-CCCCEEEEEECCCCCCCC-CCccH-----------HHHHHHHCCcEEEEEEcCCCCccCH
Confidence 344555555542211 112 234999999999999964 22111 112344433333333333 334332
Q ss_pred c--cCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCCC
Q 012237 124 V--EDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSW 201 (467)
Q Consensus 124 ~--~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg~ 201 (467)
. ..+.. ..-...-+|+..+.+.... ..--....+.|.|-||||..+-..+..- +=.++.++.+.|+
T Consensus 491 ~w~~~g~~--~~k~~~~~D~~a~~~~Lv~-~g~~d~~rl~i~G~S~GG~l~~~~~~~~---------Pdlf~A~v~~vp~ 558 (686)
T PRK10115 491 QWYEDGKF--LKKKNTFNDYLDACDALLK-LGYGSPSLCYGMGGSAGGMLMGVAINQR---------PELFHGVIAQVPF 558 (686)
T ss_pred HHHHhhhh--hcCCCcHHHHHHHHHHHHH-cCCCChHHeEEEEECHHHHHHHHHHhcC---------hhheeEEEecCCc
Confidence 1 11110 0111335566666654433 3333357899999999997555443221 1158999999999
Q ss_pred CCccch
Q 012237 202 ISPEDF 207 (467)
Q Consensus 202 i~p~~~ 207 (467)
+|....
T Consensus 559 ~D~~~~ 564 (686)
T PRK10115 559 VDVVTT 564 (686)
T ss_pred hhHhhh
Confidence 997543
No 89
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=93.95 E-value=0.22 Score=46.53 Aligned_cols=40 Identities=23% Similarity=0.238 Sum_probs=28.8
Q ss_pred ccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCCCC
Q 012237 154 ILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWI 202 (467)
Q Consensus 154 ~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg~i 202 (467)
..-.+.+|++|.|=||.....++....+ -+.++++-.|..
T Consensus 93 ~iD~~RVyv~G~S~Gg~ma~~la~~~pd---------~faa~a~~sG~~ 132 (220)
T PF10503_consen 93 NIDPSRVYVTGLSNGGMMANVLACAYPD---------LFAAVAVVSGVP 132 (220)
T ss_pred ccCCCceeeEEECHHHHHHHHHHHhCCc---------cceEEEeecccc
Confidence 4556799999999999777777654332 577777755543
No 90
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=93.31 E-value=0.27 Score=51.82 Aligned_cols=34 Identities=18% Similarity=0.091 Sum_probs=23.0
Q ss_pred HHHHHHHHHhCcccCCCCEEEEecccCcchHHHHH
Q 012237 142 TTLLMELFNKNEILQKSPLFIVAESYGGKFAATLG 176 (467)
Q Consensus 142 ~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA 176 (467)
++++++-...|. -..+++.|+|+|.||+.+-.++
T Consensus 161 l~wv~~~i~~fg-gd~~~v~~~G~SaG~~~~~~~~ 194 (493)
T cd00312 161 LKWVQDNIAAFG-GDPDSVTIFGESAGGASVSLLL 194 (493)
T ss_pred HHHHHHHHHHhC-CCcceEEEEeecHHHHHhhhHh
Confidence 455555555453 2356899999999998665544
No 91
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=92.42 E-value=1.3 Score=46.58 Aligned_cols=88 Identities=19% Similarity=0.284 Sum_probs=61.8
Q ss_pred HHHHHHHHhcCceEEEEeccCCcCCCchhHHHHHHHcCcccccccccCCCeeeEeCCCceeeeEEEEEcCEEEEEEcCCc
Q 012237 355 ISEVDELLAKGVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAG 434 (467)
Q Consensus 355 ~~~l~~LL~~~irVLiy~Gd~D~i~n~~g~~~~i~~L~W~g~~~f~~~~~~pw~~~~~~~~~G~~k~~~nltf~~V~~AG 434 (467)
-+.|....++|=|+|+|+|..|.+++..++.++-+++.=..... ..++..| +-|..|+|.|
T Consensus 343 ~pDLsaF~~~GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~-------------~~~v~dF------~RlF~vPGm~ 403 (474)
T PF07519_consen 343 DPDLSAFRARGGKLILYHGWADPLIPPQGTIDYYERVVARMGGA-------------LADVDDF------YRLFMVPGMG 403 (474)
T ss_pred CcCHHHHHhcCCeEEEEecCCCCccCCCcHHHHHHHHHHhcccc-------------cccccce------eEEEecCCCc
Confidence 34566777889999999999999999999999998876110000 0012222 4467899999
Q ss_pred ccc-cCCCCcHHHHHHHHHHhcCCCccc
Q 012237 435 HFQ-VPVDQPCIALNMLAAMTDSPASAS 461 (467)
Q Consensus 435 Hm~-vP~dqP~~a~~mi~~fl~~~~~~~ 461 (467)
|-- -|-..|-.++.-|.+|+.+---|+
T Consensus 404 HC~gG~g~~~~d~l~aL~~WVE~G~AP~ 431 (474)
T PF07519_consen 404 HCGGGPGPDPFDALTALVDWVENGKAPE 431 (474)
T ss_pred ccCCCCCCCCCCHHHHHHHHHhCCCCCC
Confidence 982 233466689999999998754443
No 92
>COG0400 Predicted esterase [General function prediction only]
Probab=92.31 E-value=1.6 Score=40.37 Aligned_cols=98 Identities=18% Similarity=0.155 Sum_probs=60.6
Q ss_pred CCccccccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeE
Q 012237 116 PVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGV 195 (467)
Q Consensus 116 PvGtGFSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi 195 (467)
+....|+..+.......+.+..+..+.+||....+.+. ...+++++.|-|=|+.++..+..+. +-.++|+
T Consensus 58 g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~~~g-i~~~~ii~~GfSqGA~ial~~~l~~---------~~~~~~a 127 (207)
T COG0400 58 GGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAEEYG-IDSSRIILIGFSQGANIALSLGLTL---------PGLFAGA 127 (207)
T ss_pred CcccceeecCCCccchhhHHHHHHHHHHHHHHHHHHhC-CChhheEEEecChHHHHHHHHHHhC---------chhhccc
Confidence 33445665544433334455667778888888887653 3357899999999998777666442 2268888
Q ss_pred eecCCCCCccch---hcccccccccCCCCCh
Q 012237 196 ALGDSWISPEDF---VFSWGPLLKDMSRLDT 223 (467)
Q Consensus 196 ~IGNg~i~p~~~---~~~~~~~~~~~glid~ 223 (467)
++=.|..-+... ...-.+.+..+|.-|+
T Consensus 128 il~~g~~~~~~~~~~~~~~~pill~hG~~Dp 158 (207)
T COG0400 128 ILFSGMLPLEPELLPDLAGTPILLSHGTEDP 158 (207)
T ss_pred hhcCCcCCCCCccccccCCCeEEEeccCcCC
Confidence 887777654421 1233445555555443
No 93
>PRK11460 putative hydrolase; Provisional
Probab=92.16 E-value=0.53 Score=44.31 Aligned_cols=37 Identities=11% Similarity=-0.032 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHH
Q 012237 140 DLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGL 177 (467)
Q Consensus 140 d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~ 177 (467)
.+.++++.+..+. ....++++|+|.|.||..+-.++.
T Consensus 86 ~l~~~i~~~~~~~-~~~~~~i~l~GfS~Gg~~al~~a~ 122 (232)
T PRK11460 86 TFIETVRYWQQQS-GVGASATALIGFSQGAIMALEAVK 122 (232)
T ss_pred HHHHHHHHHHHhc-CCChhhEEEEEECHHHHHHHHHHH
Confidence 3444444433322 334568999999999987766554
No 94
>COG4099 Predicted peptidase [General function prediction only]
Probab=92.13 E-value=2.1 Score=41.42 Aligned_cols=113 Identities=23% Similarity=0.368 Sum_probs=60.9
Q ss_pred CceEEEEEEEcCCCCCCCCCCC-CEEEEEcCCCChhhh-------hcccccccCCCcccCCCCCcchhccccceeecCCC
Q 012237 46 KAHMFWWLYKSPYRIENPSKPW-PIILWLQGGPGASGV-------GIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPV 117 (467)
Q Consensus 46 ~~~lFywf~es~~~~~~~~~~~-PlilWlnGGPG~SS~-------~~g~f~E~GP~~~~l~~n~~sW~~~anvlfiDqPv 117 (467)
+.+|=|-+|.-+ +-+|.++. ||+|||||+--.++- +.|..-+.||-.- .||=.|=
T Consensus 171 gneLkYrly~Pk--dy~pdkky~PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pedq---------------cfVlAPQ 233 (387)
T COG4099 171 GNELKYRLYTPK--DYAPDKKYYPLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPEDQ---------------CFVLAPQ 233 (387)
T ss_pred CceeeEEEeccc--ccCCCCccccEEEEEecCCCCCchhhhhhhcCccceeeecccCc---------------eEEEccc
Confidence 468888888643 23566666 999999996432221 1355555555210 3333341
Q ss_pred ccccccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHHH
Q 012237 118 GTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAV 180 (467)
Q Consensus 118 GtGFSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~ 180 (467)
++-.-+++. ...+..-......+.+=+..++..-.+.+|+.|-|-||.-.=+++.+..
T Consensus 234 ---y~~if~d~e--~~t~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfP 291 (387)
T COG4099 234 ---YNPIFADSE--EKTLLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFP 291 (387)
T ss_pred ---ccccccccc--cccchhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCc
Confidence 121101100 0111222223344444445566777889999999999976666665443
No 95
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=92.09 E-value=0.1 Score=48.48 Aligned_cols=59 Identities=22% Similarity=0.204 Sum_probs=41.1
Q ss_pred CceEEEEeccCCcCCCchhHHHHHHHcCcccccccccCCCeeeEeCCCceeeeEEEEEcCEEEEEEcCCcccccCCCCcH
Q 012237 365 GVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFQVPVDQPC 444 (467)
Q Consensus 365 ~irVLiy~Gd~D~i~n~~g~~~~i~~L~W~g~~~f~~~~~~pw~~~~~~~~~G~~k~~~nltf~~V~~AGHm~vP~dqP~ 444 (467)
+.+|++.+|+.|.++|....+...+.|+= .+ .+++|.+..|.||- ++ .
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~~------------------~~---------~~v~~~~~~g~gH~-i~----~ 202 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLKA------------------AG---------ANVEFHEYPGGGHE-IS----P 202 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHHC------------------TT----------GEEEEEETT-SSS-------H
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHHh------------------cC---------CCEEEEEcCCCCCC-CC----H
Confidence 47899999999999999888888777761 00 15788888999999 64 4
Q ss_pred HHHHHHHHHhc
Q 012237 445 IALNMLAAMTD 455 (467)
Q Consensus 445 ~a~~mi~~fl~ 455 (467)
+.+..+.+||+
T Consensus 203 ~~~~~~~~~l~ 213 (216)
T PF02230_consen 203 EELRDLREFLE 213 (216)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 66666777765
No 96
>PLN02454 triacylglycerol lipase
Probab=91.07 E-value=0.62 Score=47.39 Aligned_cols=70 Identities=13% Similarity=0.233 Sum_probs=52.0
Q ss_pred ChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCCCCCc
Q 012237 133 NDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISP 204 (467)
Q Consensus 133 ~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg~i~p 204 (467)
+...+.+++...+++..+++|+.+ ..++|+|||.||-.+-..|..|.+.... ...+++..+..|.|-+..
T Consensus 204 ~~~S~r~qvl~~V~~l~~~Yp~~~-~sI~vTGHSLGGALAtLaA~di~~~g~~-~~~~~V~~~TFGsPRVGN 273 (414)
T PLN02454 204 TKLSARSQLLAKIKELLERYKDEK-LSIVLTGHSLGASLATLAAFDIVENGVS-GADIPVTAIVFGSPQVGN 273 (414)
T ss_pred hhHHHHHHHHHHHHHHHHhCCCCC-ceEEEEecCHHHHHHHHHHHHHHHhccc-ccCCceEEEEeCCCcccC
Confidence 345788899999999999888763 3699999999998887777777543110 123467778888888864
No 97
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=90.76 E-value=0.85 Score=50.41 Aligned_cols=100 Identities=19% Similarity=0.328 Sum_probs=62.2
Q ss_pred CCCCCCEEEEEcCCCChhhhhcccccccCCCcccCCCCCcchh-ccccceeecCCCcccccccc-C--------CCC--c
Q 012237 63 PSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWL-KKADLLFVDNPVGTGYSYVE-D--------NSS--F 130 (467)
Q Consensus 63 ~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~l~~n~~sW~-~~anvlfiDqPvGtGFSy~~-~--------~~~--~ 130 (467)
|....|+||++||=.|....+..+. ..+. +-..++-+|.| |.|-|... + .+. +
T Consensus 445 p~~g~P~VVllHG~~g~~~~~~~lA--------------~~La~~Gy~VIaiDlp-GHG~S~~~~~~~~~~a~~~~~~~y 509 (792)
T TIGR03502 445 PTDGWPVVIYQHGITGAKENALAFA--------------GTLAAAGVATIAIDHP-LHGARSFDANASGVNATNANVLAY 509 (792)
T ss_pred CCCCCcEEEEeCCCCCCHHHHHHHH--------------HHHHhCCcEEEEeCCC-CCCccccccccccccccccCccce
Confidence 3334589999999777666532111 1122 23568899999 99988322 1 111 1
Q ss_pred ---------ccChHHHHHHHHHHHHHHH------H---hCcccCCCCEEEEecccCcchHHHHHH
Q 012237 131 ---------VKNDVEAANDLTTLLMELF------N---KNEILQKSPLFIVAESYGGKFAATLGL 177 (467)
Q Consensus 131 ---------~~~~~~~a~d~~~fL~~f~------~---~fp~~~~~~~yi~GESYgG~yvP~lA~ 177 (467)
-.+-.+...|++......= . .+..+...++++.|+|.||.....++.
T Consensus 510 ~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~ 574 (792)
T TIGR03502 510 MNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIA 574 (792)
T ss_pred eccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHH
Confidence 1255777788776555432 1 123355689999999999988888774
No 98
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=90.12 E-value=1.6 Score=44.35 Aligned_cols=135 Identities=20% Similarity=0.290 Sum_probs=75.6
Q ss_pred eeeEeCCCce-EEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhh-----cccccccCCCcccCCCCCcchhcccccee
Q 012237 39 GYVEVRPKAH-MFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVG-----IGNFEEVGPFDTYLKPRNSTWLKKADLLF 112 (467)
Q Consensus 39 Gyv~v~~~~~-lFywf~es~~~~~~~~~~~PlilWlnGGPG~SS~~-----~g~f~E~GP~~~~l~~n~~sW~~~anvlf 112 (467)
=+|...+++. ..=|+-....+..+...++|++|.|.|=+|.|.-- .....+.| ++ ++=
T Consensus 96 eii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G-~r---------------~VV 159 (409)
T KOG1838|consen 96 EIIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKG-YR---------------VVV 159 (409)
T ss_pred EEEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCC-cE---------------EEE
Confidence 4666655543 34455432211111123459999999999888642 12223344 22 111
Q ss_pred ecCCCccccccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeee
Q 012237 113 VDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKL 192 (467)
Q Consensus 113 iDqPvGtGFSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inL 192 (467)
+ .+.|.|-|-.+++.-+..... +|+-++++.--.+||+ ++++.+|.|+||..+ .+++-+. |+..-=.
T Consensus 160 f-N~RG~~g~~LtTpr~f~ag~t---~Dl~~~v~~i~~~~P~---a~l~avG~S~Gg~iL---~nYLGE~---g~~~~l~ 226 (409)
T KOG1838|consen 160 F-NHRGLGGSKLTTPRLFTAGWT---EDLREVVNHIKKRYPQ---APLFAVGFSMGGNIL---TNYLGEE---GDNTPLI 226 (409)
T ss_pred E-CCCCCCCCccCCCceeecCCH---HHHHHHHHHHHHhCCC---CceEEEEecchHHHH---HHHhhhc---cCCCCce
Confidence 1 255888887766544433332 3454555555567885 799999999999743 3444432 3222235
Q ss_pred eeEeecCCCC
Q 012237 193 GGVALGDSWI 202 (467)
Q Consensus 193 kGi~IGNg~i 202 (467)
.|++|=|||-
T Consensus 227 ~a~~v~~Pwd 236 (409)
T KOG1838|consen 227 AAVAVCNPWD 236 (409)
T ss_pred eEEEEeccch
Confidence 6778867664
No 99
>PRK11460 putative hydrolase; Provisional
Probab=89.45 E-value=0.69 Score=43.57 Aligned_cols=62 Identities=18% Similarity=0.133 Sum_probs=46.8
Q ss_pred CceEEEEeccCCcCCCchhHHHHHHHcCcccccccccCCCeeeEeCCCceeeeEEEEEcCEEEEEEcCCcccccCCCCcH
Q 012237 365 GVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFQVPVDQPC 444 (467)
Q Consensus 365 ~irVLiy~Gd~D~i~n~~g~~~~i~~L~W~g~~~f~~~~~~pw~~~~~~~~~G~~k~~~nltf~~V~~AGHm~vP~dqP~ 444 (467)
+.+|++.+|..|.++|...+++..+.|+=. | .+.++.++.++||. ++.+.-+
T Consensus 148 ~~pvli~hG~~D~vvp~~~~~~~~~~L~~~----------------------g-----~~~~~~~~~~~gH~-i~~~~~~ 199 (232)
T PRK11460 148 ATTIHLIHGGEDPVIDVAHAVAAQEALISL----------------------G-----GDVTLDIVEDLGHA-IDPRLMQ 199 (232)
T ss_pred CCcEEEEecCCCCccCHHHHHHHHHHHHHC----------------------C-----CCeEEEEECCCCCC-CCHHHHH
Confidence 589999999999999999998888888610 0 14677888999999 8755555
Q ss_pred HHHHHHHHHh
Q 012237 445 IALNMLAAMT 454 (467)
Q Consensus 445 ~a~~mi~~fl 454 (467)
.+.+.|.+++
T Consensus 200 ~~~~~l~~~l 209 (232)
T PRK11460 200 FALDRLRYTV 209 (232)
T ss_pred HHHHHHHHHc
Confidence 5555555554
No 100
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=88.28 E-value=1.2 Score=42.98 Aligned_cols=59 Identities=17% Similarity=0.188 Sum_probs=47.6
Q ss_pred CceEEEEeccCCcCCCchhHHHHHHHcCcccccccccCCCeeeEeCCCceeeeEEEEEcCEEEEEEcCCcccccCCCCcH
Q 012237 365 GVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFQVPVDQPC 444 (467)
Q Consensus 365 ~irVLiy~Gd~D~i~n~~g~~~~i~~L~W~g~~~f~~~~~~pw~~~~~~~~~G~~k~~~nltf~~V~~AGHm~vP~dqP~ 444 (467)
.++++++.|..|.++|..-.+++.+.+. .-..+++ .+||+ ....+|+
T Consensus 211 ~vP~l~I~g~~D~~ip~~~~~~m~~~~~-------------------------------~~~~~~l-~~gH~-p~ls~P~ 257 (273)
T PLN02211 211 KVPRVYIKTLHDHVVKPEQQEAMIKRWP-------------------------------PSQVYEL-ESDHS-PFFSTPF 257 (273)
T ss_pred ccceEEEEeCCCCCCCHHHHHHHHHhCC-------------------------------ccEEEEE-CCCCC-ccccCHH
Confidence 5799999999999999887777776664 0123556 59999 9999999
Q ss_pred HHHHHHHHHhcC
Q 012237 445 IALNMLAAMTDS 456 (467)
Q Consensus 445 ~a~~mi~~fl~~ 456 (467)
...++|..+.+.
T Consensus 258 ~~~~~i~~~a~~ 269 (273)
T PLN02211 258 LLFGLLIKAAAS 269 (273)
T ss_pred HHHHHHHHHHHH
Confidence 999999987654
No 101
>PRK10566 esterase; Provisional
Probab=86.60 E-value=1.2 Score=42.02 Aligned_cols=62 Identities=24% Similarity=0.329 Sum_probs=46.8
Q ss_pred CceEEEEeccCCcCCCchhHHHHHHHcCcccccccccCCCeeeEeCCCceeeeEEEEEcCEEEEEEcCCcccccCCCCcH
Q 012237 365 GVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFQVPVDQPC 444 (467)
Q Consensus 365 ~irVLiy~Gd~D~i~n~~g~~~~i~~L~W~g~~~f~~~~~~pw~~~~~~~~~G~~k~~~nltf~~V~~AGHm~vP~dqP~ 444 (467)
..+||+.+|..|.++|...++++.+.++=.+. ..++++.++.|+||. .. |
T Consensus 186 ~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~-------------------------~~~~~~~~~~~~~H~-~~---~- 235 (249)
T PRK10566 186 DRPLLLWHGLADDVVPAAESLRLQQALRERGL-------------------------DKNLTCLWEPGVRHR-IT---P- 235 (249)
T ss_pred CCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCC-------------------------CcceEEEecCCCCCc-cC---H-
Confidence 46999999999999999999888887861110 015788899999999 74 3
Q ss_pred HHHHHHHHHhcC
Q 012237 445 IALNMLAAMTDS 456 (467)
Q Consensus 445 ~a~~mi~~fl~~ 456 (467)
..++-+.+||++
T Consensus 236 ~~~~~~~~fl~~ 247 (249)
T PRK10566 236 EALDAGVAFFRQ 247 (249)
T ss_pred HHHHHHHHHHHh
Confidence 456677777763
No 102
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=86.53 E-value=1.8 Score=39.29 Aligned_cols=58 Identities=16% Similarity=0.240 Sum_probs=49.4
Q ss_pred cChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEee
Q 012237 132 KNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVAL 197 (467)
Q Consensus 132 ~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~I 197 (467)
.+-+++|.|+-+.++.+.+ +++.+.+.|.|-|+|.-.+|.+..++....++ .++++++
T Consensus 45 rtP~~~a~Dl~~~i~~y~~---~w~~~~vvLiGYSFGADvlP~~~nrLp~~~r~-----~v~~v~L 102 (192)
T PF06057_consen 45 RTPEQTAADLARIIRHYRA---RWGRKRVVLIGYSFGADVLPFIYNRLPAALRA-----RVAQVVL 102 (192)
T ss_pred CCHHHHHHHHHHHHHHHHH---HhCCceEEEEeecCCchhHHHHHhhCCHHHHh-----heeEEEE
Confidence 4678999999999998888 55678999999999999999999988776544 6888887
No 103
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=86.15 E-value=2.2 Score=38.89 Aligned_cols=64 Identities=22% Similarity=0.258 Sum_probs=44.8
Q ss_pred HHhcCceEEEEeccCCcCCCchhHHHHHHHcCcccccccccCCCeeeEeCCCceeeeEEEEEcCEEEEEEcCCcccccCC
Q 012237 361 LLAKGVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFQVPV 440 (467)
Q Consensus 361 LL~~~irVLiy~Gd~D~i~n~~g~~~~i~~L~W~g~~~f~~~~~~pw~~~~~~~~~G~~k~~~nltf~~V~~AGHm~vP~ 440 (467)
+.....++|+..|+.|.+.+....+.+...+.. ...++++.++||+ ...
T Consensus 217 ~~~~~~P~l~i~g~~d~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~gH~-~~~ 265 (282)
T COG0596 217 LARITVPTLIIHGEDDPVVPAELARRLAAALPN------------------------------DARLVVIPGAGHF-PHL 265 (282)
T ss_pred hccCCCCeEEEecCCCCcCCHHHHHHHHhhCCC------------------------------CceEEEeCCCCCc-chh
Confidence 334469999999999966654443333333331 2456789999999 999
Q ss_pred CCcHHHHHHHHHHhc
Q 012237 441 DQPCIALNMLAAMTD 455 (467)
Q Consensus 441 dqP~~a~~mi~~fl~ 455 (467)
++|+...+.+..|+.
T Consensus 266 ~~p~~~~~~i~~~~~ 280 (282)
T COG0596 266 EAPEAFAAALLAFLE 280 (282)
T ss_pred hcHHHHHHHHHHHHh
Confidence 999977776666543
No 104
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=86.03 E-value=1.5 Score=42.41 Aligned_cols=71 Identities=11% Similarity=-0.051 Sum_probs=47.0
Q ss_pred HHHhcCceEEEEeccCCcCCCchhHHHHHHHcCcccccccccCCCeeeEeCCCceeeeEEEEEcCEEEEEEcCCccccc-
Q 012237 360 ELLAKGVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFQV- 438 (467)
Q Consensus 360 ~LL~~~irVLiy~Gd~D~i~n~~g~~~~i~~L~W~g~~~f~~~~~~pw~~~~~~~~~G~~k~~~nltf~~V~~AGHm~v- 438 (467)
.|...+.++|+..|+.|... ..+.+.+.-. ..|+.. + ...+.+++++.+|||. +
T Consensus 202 ~l~~~~~P~ll~~g~~D~~~-----~~~~~~~~~~--~~~~~~----l-------------~~~~v~~~~~~~~~H~-l~ 256 (274)
T TIGR03100 202 GLERFQGPVLFILSGNDLTA-----QEFADSVLGE--PAWRGA----L-------------EDPGIERVEIDGADHT-FS 256 (274)
T ss_pred HHHhcCCcEEEEEcCcchhH-----HHHHHHhccC--hhhHHH----h-------------hcCCeEEEecCCCCcc-cc
Confidence 34345799999999999863 3444332210 111000 0 0136788999999999 8
Q ss_pred CCCCcHHHHHHHHHHhc
Q 012237 439 PVDQPCIALNMLAAMTD 455 (467)
Q Consensus 439 P~dqP~~a~~mi~~fl~ 455 (467)
..+.|+...+.|.+||.
T Consensus 257 ~e~~~~~v~~~i~~wL~ 273 (274)
T TIGR03100 257 DRVWREWVAARTTEWLR 273 (274)
T ss_pred cHHHHHHHHHHHHHHHh
Confidence 66677999999999985
No 105
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=86.03 E-value=2.1 Score=41.91 Aligned_cols=28 Identities=14% Similarity=0.334 Sum_probs=23.6
Q ss_pred CceEEEEeccCCcCCCchhHHHHHHHcC
Q 012237 365 GVNVTVYNGQLDVICSTKGTEAWIEKLK 392 (467)
Q Consensus 365 ~irVLiy~Gd~D~i~n~~g~~~~i~~L~ 392 (467)
.+++||.+|+.|.+||...++.+.+.++
T Consensus 248 ~~P~lii~g~~D~~~p~~~~~~~~~~~~ 275 (306)
T TIGR01249 248 NIPTYIVHGRYDLCCPLQSAWALHKAFP 275 (306)
T ss_pred CCCeEEEecCCCCCCCHHHHHHHHHhCC
Confidence 4899999999999999887777766654
No 106
>PLN02571 triacylglycerol lipase
Probab=85.88 E-value=2.3 Score=43.41 Aligned_cols=70 Identities=11% Similarity=0.109 Sum_probs=50.2
Q ss_pred hHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHH--HHc---CcceeeeeeEeecCCCCCc
Q 012237 134 DVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKA--IEA---GKLKLKLGGVALGDSWISP 204 (467)
Q Consensus 134 ~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~--~~~---~~~~inLkGi~IGNg~i~p 204 (467)
...+.+++...|+.+.+++|.. ..+++|+|+|.||-.+-..|..|... +.. .+..+++..+..|.|-+..
T Consensus 203 k~Sar~qvl~eV~~L~~~y~~e-~~sI~VTGHSLGGALAtLaA~dl~~~g~n~~~~~~~~~~~V~v~TFGsPRVGN 277 (413)
T PLN02571 203 KTSARDQVLNEVGRLVEKYKDE-EISITICGHSLGAALATLNAVDIVANGFNRSKSRPNKSCPVTAFVFASPRVGD 277 (413)
T ss_pred hhhHHHHHHHHHHHHHHhcCcc-cccEEEeccchHHHHHHHHHHHHHHhcccccccccccCcceEEEEeCCCCccC
Confidence 3467788899999999988765 35799999999998888777777542 110 1123456777888877764
No 107
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=85.87 E-value=1.8 Score=36.65 Aligned_cols=33 Identities=18% Similarity=0.240 Sum_probs=27.0
Q ss_pred HHHhcCceEEEEeccCCcCCCchhHHHHHHHcC
Q 012237 360 ELLAKGVNVTVYNGQLDVICSTKGTEAWIEKLK 392 (467)
Q Consensus 360 ~LL~~~irVLiy~Gd~D~i~n~~g~~~~i~~L~ 392 (467)
.+-...++|++..|+.|.+++....+++.+.++
T Consensus 99 ~~~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~ 131 (145)
T PF12695_consen 99 DLAKIRIPVLFIHGENDPLVPPEQVRRLYEALP 131 (145)
T ss_dssp HHTTTTSEEEEEEETT-SSSHHHHHHHHHHHHC
T ss_pred hhhccCCcEEEEEECCCCcCCHHHHHHHHHHcC
Confidence 444557899999999999999888888888876
No 108
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=84.72 E-value=1.9 Score=39.26 Aligned_cols=41 Identities=22% Similarity=0.311 Sum_probs=31.2
Q ss_pred ccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCCCCCccc
Q 012237 154 ILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPED 206 (467)
Q Consensus 154 ~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg~i~p~~ 206 (467)
+.....+.|.|-|-||.|+-.+|.+. +++. ++.||.+.|..
T Consensus 55 ~~~~~~~~liGSSlGG~~A~~La~~~-----------~~~a-vLiNPav~p~~ 95 (187)
T PF05728_consen 55 ELKPENVVLIGSSLGGFYATYLAERY-----------GLPA-VLINPAVRPYE 95 (187)
T ss_pred hCCCCCeEEEEEChHHHHHHHHHHHh-----------CCCE-EEEcCCCCHHH
Confidence 33445699999999999999888653 5666 55599998854
No 109
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=84.60 E-value=1.7 Score=36.91 Aligned_cols=63 Identities=16% Similarity=0.189 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCCCCC
Q 012237 136 EAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWIS 203 (467)
Q Consensus 136 ~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg~i~ 203 (467)
...+.+.+.|++..+++| ...+.|+|+|-||-.+..++..+.+... ....+++-+.-|.|-+.
T Consensus 45 ~~~~~~~~~l~~~~~~~~---~~~i~itGHSLGGalA~l~a~~l~~~~~--~~~~~~~~~~fg~P~~~ 107 (140)
T PF01764_consen 45 SLYDQILDALKELVEKYP---DYSIVITGHSLGGALASLAAADLASHGP--SSSSNVKCYTFGAPRVG 107 (140)
T ss_dssp HHHHHHHHHHHHHHHHST---TSEEEEEEETHHHHHHHHHHHHHHHCTT--TSTTTEEEEEES-S--B
T ss_pred HHHHHHHHHHHHHHhccc---CccchhhccchHHHHHHHHHHhhhhccc--ccccceeeeecCCcccc
Confidence 455567777788777776 4689999999999988888887765321 11346777777776663
No 110
>PF03283 PAE: Pectinacetylesterase
Probab=83.63 E-value=4.7 Score=40.70 Aligned_cols=127 Identities=13% Similarity=0.073 Sum_probs=66.6
Q ss_pred CEEEEEcCCCChhhhhc---ccccccCCCc-----c--------cCCCCCcchhccccceeecCCCccccccccCCCCcc
Q 012237 68 PIILWLQGGPGASGVGI---GNFEEVGPFD-----T--------YLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFV 131 (467)
Q Consensus 68 PlilWlnGGPG~SS~~~---g~f~E~GP~~-----~--------~l~~n~~sW~~~anvlfiDqPvGtGFSy~~~~~~~~ 131 (467)
-+||.|.||--|.+... -...++|-.. + +...||.-|+ .|++||=-=.|.-|+- +.....
T Consensus 51 ~~li~leGGG~C~~~~tC~~r~~t~~gss~~~~~~~~~~Gils~~~~~Np~f~~--wN~V~vpYC~Gd~~~G--~~~~~~ 126 (361)
T PF03283_consen 51 KWLIFLEGGGWCWDAETCAQRSSTNLGSSKNWPKTFAFSGILSNDPAENPDFYN--WNHVFVPYCDGDSHSG--DVEPVD 126 (361)
T ss_pred eEEEEeccchhcCChhHHhhhccCccccccchhhhccccccccCCcccCCcccc--ccEEEEEecCCccccC--cccccc
Confidence 79999999999987421 1122333322 1 1223553332 5677774333444443 111111
Q ss_pred cC---h-HHHHHHHHHHHHHHHHh-CcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCCCCC
Q 012237 132 KN---D-VEAANDLTTLLMELFNK-NEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWIS 203 (467)
Q Consensus 132 ~~---~-~~~a~d~~~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg~i~ 203 (467)
.. . -.-...+-.+|...... +++ ...+.|+|.|=||.=+..-+.++.+.... ...++++.=..-++|
T Consensus 127 ~~~~~l~frG~~i~~avl~~l~~~gl~~--a~~vlltG~SAGG~g~~~~~d~~~~~lp~---~~~v~~~~DsG~f~d 198 (361)
T PF03283_consen 127 YGGTTLYFRGYRILRAVLDDLLSNGLPN--AKQVLLTGCSAGGLGAILHADYVRDRLPS---SVKVKCLSDSGFFLD 198 (361)
T ss_pred cCCceeEeecHHHHHHHHHHHHHhcCcc--cceEEEeccChHHHHHHHHHHHHHHHhcc---CceEEEecccccccc
Confidence 11 1 11233333445545554 554 46899999999998777777777665432 234555544333333
No 111
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=83.31 E-value=2.7 Score=39.24 Aligned_cols=63 Identities=14% Similarity=0.113 Sum_probs=43.6
Q ss_pred hHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCCCCC
Q 012237 134 DVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWIS 203 (467)
Q Consensus 134 ~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg~i~ 203 (467)
-..+.+++...++...+++|. .+++++|+|-||-.+-.+|..+.+.. ...+++.+..|.|-+.
T Consensus 107 ~~~~~~~~~~~~~~~~~~~p~---~~i~vtGHSLGGaiA~l~a~~l~~~~----~~~~i~~~tFg~P~vg 169 (229)
T cd00519 107 YKSLYNQVLPELKSALKQYPD---YKIIVTGHSLGGALASLLALDLRLRG----PGSDVTVYTFGQPRVG 169 (229)
T ss_pred HHHHHHHHHHHHHHHHhhCCC---ceEEEEccCHHHHHHHHHHHHHHhhC----CCCceEEEEeCCCCCC
Confidence 334445556666666666664 58999999999988888777765432 1236788888887764
No 112
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=83.16 E-value=2.5 Score=42.82 Aligned_cols=62 Identities=23% Similarity=0.252 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHHHHHhCcccCC-CCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCCCCCcc
Q 012237 135 VEAANDLTTLLMELFNKNEILQK-SPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPE 205 (467)
Q Consensus 135 ~~~a~d~~~fL~~f~~~fp~~~~-~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg~i~p~ 205 (467)
--.|-|+..+|..-...||.... .|+.+.|.|||| |+..|+.+|. +-.+.||+=-.+|+-|.
T Consensus 160 IMqAiD~INAl~~l~k~~~~~~~~lp~I~~G~s~G~-yla~l~~k~a--------P~~~~~~iDns~~~~p~ 222 (403)
T PF11144_consen 160 IMQAIDIINALLDLKKIFPKNGGGLPKIYIGSSHGG-YLAHLCAKIA--------PWLFDGVIDNSSYALPP 222 (403)
T ss_pred HHHHHHHHHHHHHHHHhhhcccCCCcEEEEecCcHH-HHHHHHHhhC--------ccceeEEEecCccccch
Confidence 45789999999999999999985 799999999999 4444444442 33566776666676654
No 113
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=83.02 E-value=3.8 Score=43.62 Aligned_cols=129 Identities=17% Similarity=0.214 Sum_probs=70.4
Q ss_pred ceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhcccccccCCCcccCCCCCcchhccc----------cceeecCC
Q 012237 47 AHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKA----------DLLFVDNP 116 (467)
Q Consensus 47 ~~lFywf~es~~~~~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~l~~n~~sW~~~a----------nvlfiDqP 116 (467)
+-+.|-..-.+.. -+|-+..|++|.+-||||.--. .|.++|.+.. =|++||.-
T Consensus 623 g~~lYgmiyKPhn-~~pgkkYptvl~VYGGP~VQlV----------------nnsfkgi~ylR~~~LaslGy~Vv~IDnR 685 (867)
T KOG2281|consen 623 GLTLYGMIYKPHN-FQPGKKYPTVLNVYGGPGVQLV----------------NNSFKGIQYLRFCRLASLGYVVVFIDNR 685 (867)
T ss_pred CcEEEEEEEcccc-CCCCCCCceEEEEcCCCceEEe----------------eccccceehhhhhhhhhcceEEEEEcCC
Confidence 3555555554432 4566667999999999986533 3778887643 35889966
Q ss_pred Cccc---ccc--cc-CCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCccee
Q 012237 117 VGTG---YSY--VE-DNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKL 190 (467)
Q Consensus 117 vGtG---FSy--~~-~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~i 190 (467)
|+- .=+ .- ..=..+.-+++ ++-||-.-++.--..-..+-|-|-||||....+. |.+. +-
T Consensus 686 -GS~hRGlkFE~~ik~kmGqVE~eDQ-----Veglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~---L~~~------P~ 750 (867)
T KOG2281|consen 686 -GSAHRGLKFESHIKKKMGQVEVEDQ-----VEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMG---LAQY------PN 750 (867)
T ss_pred -CccccchhhHHHHhhccCeeeehhh-----HHHHHHHHHhcCcccchheeEeccccccHHHHHH---hhcC------cc
Confidence 542 111 00 00011222222 2334333333211123568999999999543332 1111 11
Q ss_pred eeeeEeecCCCCCccch
Q 012237 191 KLGGVALGDSWISPEDF 207 (467)
Q Consensus 191 nLkGi~IGNg~i~p~~~ 207 (467)
-++-.|-|.|.++....
T Consensus 751 IfrvAIAGapVT~W~~Y 767 (867)
T KOG2281|consen 751 IFRVAIAGAPVTDWRLY 767 (867)
T ss_pred eeeEEeccCcceeeeee
Confidence 36777788888887543
No 114
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=82.67 E-value=2.2 Score=39.54 Aligned_cols=56 Identities=27% Similarity=0.306 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCCCC
Q 012237 136 EAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWI 202 (467)
Q Consensus 136 ~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg~i 202 (467)
+.++.+.+++....+.. ...++++|.|-|=||..+-.++.+. +-.+.|++.-+|++
T Consensus 85 ~s~~~l~~li~~~~~~~--i~~~ri~l~GFSQGa~~al~~~l~~---------p~~~~gvv~lsG~~ 140 (216)
T PF02230_consen 85 ESAERLDELIDEEVAYG--IDPSRIFLGGFSQGAAMALYLALRY---------PEPLAGVVALSGYL 140 (216)
T ss_dssp HHHHHHHHHHHHHHHTT----GGGEEEEEETHHHHHHHHHHHCT---------SSTSSEEEEES---
T ss_pred HHHHHHHHHHHHHHHcC--CChhheehhhhhhHHHHHHHHHHHc---------CcCcCEEEEeeccc
Confidence 34444455555444322 4567899999999997666665421 12677887755544
No 115
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=82.60 E-value=2.5 Score=36.74 Aligned_cols=44 Identities=23% Similarity=0.233 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHHHH
Q 012237 135 VEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVK 181 (467)
Q Consensus 135 ~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~ 181 (467)
..+.+++...+++....+|. .+++|+|+|.||..+-.+|..+.+
T Consensus 8 ~~~~~~i~~~~~~~~~~~p~---~~i~v~GHSlGg~lA~l~a~~~~~ 51 (153)
T cd00741 8 RSLANLVLPLLKSALAQYPD---YKIHVTGHSLGGALAGLAGLDLRG 51 (153)
T ss_pred HHHHHHHHHHHHHHHHHCCC---CeEEEEEcCHHHHHHHHHHHHHHh
Confidence 34555566666666655564 689999999999988888877654
No 116
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=82.57 E-value=2.5 Score=39.80 Aligned_cols=110 Identities=22% Similarity=0.365 Sum_probs=56.5
Q ss_pred CCCCEEEEEcCCCChhhhhcccccccCCCc-ccCCCCCcchh--ccccceeecCCCccccccccCCC---CcccChHHHH
Q 012237 65 KPWPIILWLQGGPGASGVGIGNFEEVGPFD-TYLKPRNSTWL--KKADLLFVDNPVGTGYSYVEDNS---SFVKNDVEAA 138 (467)
Q Consensus 65 ~~~PlilWlnGGPG~SS~~~g~f~E~GP~~-~~l~~n~~sW~--~~anvlfiDqPvGtGFSy~~~~~---~~~~~~~~~a 138 (467)
+++|+++|+-|-||-++. + .|.|=-. .++..+---|+ -..|. +-| -|-.++.+ ..--+.++..
T Consensus 27 ~~~~li~~IpGNPG~~gF-Y---~~F~~~L~~~l~~r~~~wtIsh~~H~---~~P----~sl~~~~s~~~~eifsL~~QV 95 (301)
T KOG3975|consen 27 EDKPLIVWIPGNPGLLGF-Y---TEFARHLHLNLIDRLPVWTISHAGHA---LMP----ASLREDHSHTNEEIFSLQDQV 95 (301)
T ss_pred CCceEEEEecCCCCchhH-H---HHHHHHHHHhcccccceeEEeccccc---cCC----cccccccccccccccchhhHH
Confidence 456999999999998865 3 3332211 11211111333 11221 223 11111111 1122445555
Q ss_pred HHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEee
Q 012237 139 NDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVAL 197 (467)
Q Consensus 139 ~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~I 197 (467)
+.=.+|++++. | +++++||.|+|-|.. +..+|+..++ ...+++-..+
T Consensus 96 ~HKlaFik~~~---P--k~~ki~iiGHSiGaY----m~Lqil~~~k---~~~~vqKa~~ 142 (301)
T KOG3975|consen 96 DHKLAFIKEYV---P--KDRKIYIIGHSIGAY----MVLQILPSIK---LVFSVQKAVL 142 (301)
T ss_pred HHHHHHHHHhC---C--CCCEEEEEecchhHH----HHHHHhhhcc---cccceEEEEE
Confidence 66667887664 2 478999999999984 4445554432 2335544444
No 117
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=82.53 E-value=1.9 Score=39.76 Aligned_cols=40 Identities=15% Similarity=0.108 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHH
Q 012237 135 VEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLG 176 (467)
Q Consensus 135 ~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA 176 (467)
+-+=.|+..+++.|+.++++ +|||+|+|+|=|+..+-.|-
T Consensus 74 ~~ay~DV~~AF~~yL~~~n~--GRPfILaGHSQGs~~l~~LL 113 (207)
T PF11288_consen 74 DLAYSDVRAAFDYYLANYNN--GRPFILAGHSQGSMHLLRLL 113 (207)
T ss_pred HhhHHHHHHHHHHHHHhcCC--CCCEEEEEeChHHHHHHHHH
Confidence 34456788889999998876 89999999999996555443
No 118
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=82.15 E-value=3.8 Score=40.02 Aligned_cols=69 Identities=25% Similarity=0.360 Sum_probs=50.7
Q ss_pred CceEEEEeccCCcCCCchhHHHHHHHcCcccccccccCCCeeeEeCCCceeeeEEEEEcCEEEEEEcCCcccccC--CCC
Q 012237 365 GVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFQVP--VDQ 442 (467)
Q Consensus 365 ~irVLiy~Gd~D~i~n~~g~~~~i~~L~W~g~~~f~~~~~~pw~~~~~~~~~G~~k~~~nltf~~V~~AGHm~vP--~dq 442 (467)
..+|+||+|..|-++|+..+...++++-=.| . .+++|.++.+++|+ .. ...
T Consensus 219 ~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G----------------~----------a~V~~~~~~~~~H~-~~~~~~~ 271 (290)
T PF03583_consen 219 TVPVLIYQGTADEVVPPADTDALVAKWCAAG----------------G----------ADVEYVRYPGGGHL-GAAFASA 271 (290)
T ss_pred CCCEEEEecCCCCCCChHHHHHHHHHHHHcC----------------C----------CCEEEEecCCCChh-hhhhcCc
Confidence 5899999999999999999999998875111 0 16888999999999 65 456
Q ss_pred cHHHHHHHHHHhcCCCccc
Q 012237 443 PCIALNMLAAMTDSPASAS 461 (467)
Q Consensus 443 P~~a~~mi~~fl~~~~~~~ 461 (467)
|. ++.-|++=++|++-.+
T Consensus 272 ~~-a~~Wl~~rf~G~~~~~ 289 (290)
T PF03583_consen 272 PD-ALAWLDDRFAGKPATS 289 (290)
T ss_pred HH-HHHHHHHHHCCCCCCC
Confidence 64 4455555566665443
No 119
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=81.65 E-value=4 Score=40.41 Aligned_cols=59 Identities=19% Similarity=0.271 Sum_probs=39.7
Q ss_pred ccccceeecCCCccccccccCCCCcccChHHHHHHHHHHHHHHHHhCc-ccCCCCEEEEecccCcchH
Q 012237 106 KKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNE-ILQKSPLFIVAESYGGKFA 172 (467)
Q Consensus 106 ~~anvlfiDqPvGtGFSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp-~~~~~~~yi~GESYgG~yv 172 (467)
..+|+|..--| |||+|.+.. +.++.+.+ ++++-++++.++ .-+.+.+.+.|.|-||-..
T Consensus 170 ~~aNvl~fNYp-GVg~S~G~~------s~~dLv~~-~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vq 229 (365)
T PF05677_consen 170 LGANVLVFNYP-GVGSSTGPP------SRKDLVKD-YQACVRYLRDEEQGPKAKNIILYGHSLGGGVQ 229 (365)
T ss_pred cCCcEEEECCC-ccccCCCCC------CHHHHHHH-HHHHHHHHHhcccCCChheEEEeeccccHHHH
Confidence 46899999999 999996532 23444443 344445555433 3456899999999999543
No 120
>COG0400 Predicted esterase [General function prediction only]
Probab=81.37 E-value=3.9 Score=37.84 Aligned_cols=60 Identities=22% Similarity=0.297 Sum_probs=44.3
Q ss_pred cCceEEEEeccCCcCCCchhHHHHHHHcCcccccccccCCCeeeEeCCCceeeeEEEEEcCEEEEEEcCCcccccCCCCc
Q 012237 364 KGVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFQVPVDQP 443 (467)
Q Consensus 364 ~~irVLiy~Gd~D~i~n~~g~~~~i~~L~W~g~~~f~~~~~~pw~~~~~~~~~G~~k~~~nltf~~V~~AGHm~vP~dqP 443 (467)
++.||++.+|..|.+||..-+++..+.|.=.|. +..+.++. .||. ++
T Consensus 145 ~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~---------------------------~v~~~~~~-~GH~-i~---- 191 (207)
T COG0400 145 AGTPILLSHGTEDPVVPLALAEALAEYLTASGA---------------------------DVEVRWHE-GGHE-IP---- 191 (207)
T ss_pred CCCeEEEeccCcCCccCHHHHHHHHHHHHHcCC---------------------------CEEEEEec-CCCc-CC----
Confidence 479999999999999999999998888862221 34445565 9999 54
Q ss_pred HHHHHHHHHHhcC
Q 012237 444 CIALNMLAAMTDS 456 (467)
Q Consensus 444 ~~a~~mi~~fl~~ 456 (467)
.+.++.+++|+.+
T Consensus 192 ~e~~~~~~~wl~~ 204 (207)
T COG0400 192 PEELEAARSWLAN 204 (207)
T ss_pred HHHHHHHHHHHHh
Confidence 4556666667654
No 121
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=80.83 E-value=1.6 Score=42.11 Aligned_cols=85 Identities=18% Similarity=0.115 Sum_probs=56.5
Q ss_pred ccccceeecCCCccccccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHc
Q 012237 106 KKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEA 185 (467)
Q Consensus 106 ~~anvlfiDqPvGtGFSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~ 185 (467)
+=+.+|.+|.. |+|-|.+.-. ....+-++|.++.+ +|....|-- +-++-++|-||+|......|..-
T Consensus 56 ~GY~vV~~D~R-G~g~S~G~~~----~~~~~e~~D~~d~I-~W~~~Qpws-~G~VGm~G~SY~G~~q~~~A~~~------ 122 (272)
T PF02129_consen 56 RGYAVVVQDVR-GTGGSEGEFD----PMSPNEAQDGYDTI-EWIAAQPWS-NGKVGMYGISYGGFTQWAAAARR------ 122 (272)
T ss_dssp TT-EEEEEE-T-TSTTS-S-B-----TTSHHHHHHHHHHH-HHHHHCTTE-EEEEEEEEETHHHHHHHHHHTTT------
T ss_pred CCCEEEEECCc-ccccCCCccc----cCChhHHHHHHHHH-HHHHhCCCC-CCeEEeeccCHHHHHHHHHHhcC------
Confidence 45778999966 9999986532 11455566676666 477777654 44799999999998888777521
Q ss_pred CcceeeeeeEeecCCCCCccc
Q 012237 186 GKLKLKLGGVALGDSWISPED 206 (467)
Q Consensus 186 ~~~~inLkGi~IGNg~i~p~~ 206 (467)
.-.||.|+..-+..|...
T Consensus 123 ---~p~LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 123 ---PPHLKAIVPQSGWSDLYR 140 (272)
T ss_dssp ----TTEEEEEEESE-SBTCC
T ss_pred ---CCCceEEEecccCCcccc
Confidence 226999999877777543
No 122
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=80.21 E-value=3.9 Score=42.14 Aligned_cols=58 Identities=7% Similarity=-0.126 Sum_probs=45.5
Q ss_pred CceEEEEeccCCcCCCchhHHHHHHHcCcccccccccCCCeeeEeCCCceeeeEEEEEcCEEEEEEcCCcccccCCCCcH
Q 012237 365 GVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFQVPVDQPC 444 (467)
Q Consensus 365 ~irVLiy~Gd~D~i~n~~g~~~~i~~L~W~g~~~f~~~~~~pw~~~~~~~~~G~~k~~~nltf~~V~~AGHm~vP~dqP~ 444 (467)
.++||+.+|..|.++|....+.+.+... +..++.+.++ |+ .++|+
T Consensus 355 ~~PvLiI~G~~D~ivP~~~a~~l~~~~~-------------------------------~~~l~~i~~~-~~---~e~~~ 399 (414)
T PRK05077 355 PTPMLSGYWKNDPFSPEEDSRLIASSSA-------------------------------DGKLLEIPFK-PV---YRNFD 399 (414)
T ss_pred CCcEEEEecCCCCCCCHHHHHHHHHhCC-------------------------------CCeEEEccCC-Cc---cCCHH
Confidence 4799999999999999998886655443 2234667776 77 56999
Q ss_pred HHHHHHHHHhcCC
Q 012237 445 IALNMLAAMTDSP 457 (467)
Q Consensus 445 ~a~~mi~~fl~~~ 457 (467)
.++..+.+||+..
T Consensus 400 ~~~~~i~~wL~~~ 412 (414)
T PRK05077 400 KALQEISDWLEDR 412 (414)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998753
No 123
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=79.47 E-value=4.6 Score=41.88 Aligned_cols=33 Identities=15% Similarity=0.010 Sum_probs=23.2
Q ss_pred HHHHHHHHHhCcccCCCCEEEEecccCcchHHHH
Q 012237 142 TTLLMELFNKNEILQKSPLFIVAESYGGKFAATL 175 (467)
Q Consensus 142 ~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~l 175 (467)
++++++..+.|-.= ..++-|+|||=|+.-|-.+
T Consensus 165 LkWV~~NIe~FGGD-p~NVTl~GeSAGa~si~~L 197 (491)
T COG2272 165 LKWVRDNIEAFGGD-PQNVTLFGESAGAASILTL 197 (491)
T ss_pred HHHHHHHHHHhCCC-ccceEEeeccchHHHHHHh
Confidence 36666776666442 3579999999999766554
No 124
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=79.26 E-value=3.8 Score=42.15 Aligned_cols=35 Identities=23% Similarity=0.283 Sum_probs=23.9
Q ss_pred CCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCCC
Q 012237 158 SPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSW 201 (467)
Q Consensus 158 ~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg~ 201 (467)
....|+|.|+||.-+-.++.+-.+ .+.+++.-.|.
T Consensus 288 ~~~~IaG~S~GGl~AL~~al~~Pd---------~Fg~v~s~Sgs 322 (411)
T PRK10439 288 DRTVVAGQSFGGLAALYAGLHWPE---------RFGCVLSQSGS 322 (411)
T ss_pred cceEEEEEChHHHHHHHHHHhCcc---------cccEEEEeccc
Confidence 468999999999777766654222 46666665553
No 125
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=78.87 E-value=5.7 Score=47.14 Aligned_cols=101 Identities=14% Similarity=0.149 Sum_probs=64.7
Q ss_pred CEEEEEcCCCChhhhhcccccccCCCcccCCCCCcchhccccceeecCCCccccccccCCCCcccChHHHHHHHHHHHHH
Q 012237 68 PIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLME 147 (467)
Q Consensus 68 PlilWlnGGPG~SS~~~g~f~E~GP~~~~l~~n~~sW~~~anvlfiDqPvGtGFSy~~~~~~~~~~~~~~a~d~~~fL~~ 147 (467)
|-++.++|++|.+..+ ..+.+ .......++-+|.| |.|-+. ....+.++.|.++.+.++.
T Consensus 1069 ~~l~~lh~~~g~~~~~-~~l~~-------------~l~~~~~v~~~~~~-g~~~~~-----~~~~~l~~la~~~~~~i~~ 1128 (1296)
T PRK10252 1069 PTLFCFHPASGFAWQF-SVLSR-------------YLDPQWSIYGIQSP-RPDGPM-----QTATSLDEVCEAHLATLLE 1128 (1296)
T ss_pred CCeEEecCCCCchHHH-HHHHH-------------hcCCCCcEEEEECC-CCCCCC-----CCCCCHHHHHHHHHHHHHh
Confidence 5678899988877663 22210 11234677888988 776431 1245778888888777764
Q ss_pred HHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCC
Q 012237 148 LFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDS 200 (467)
Q Consensus 148 f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg 200 (467)
. .| ..|++|.|.|+||..+-.+|.++.+. + ..+..+++-++
T Consensus 1129 ~---~~---~~p~~l~G~S~Gg~vA~e~A~~l~~~---~---~~v~~l~l~~~ 1169 (1296)
T PRK10252 1129 Q---QP---HGPYHLLGYSLGGTLAQGIAARLRAR---G---EEVAFLGLLDT 1169 (1296)
T ss_pred h---CC---CCCEEEEEechhhHHHHHHHHHHHHc---C---CceeEEEEecC
Confidence 2 22 35899999999998777777665432 1 24556665444
No 126
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=78.29 E-value=3.3 Score=41.86 Aligned_cols=67 Identities=30% Similarity=0.446 Sum_probs=44.5
Q ss_pred cccceeec-------CCCccccccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHH
Q 012237 107 KADLLFVD-------NPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATL 175 (467)
Q Consensus 107 ~anvlfiD-------qPvGtGFSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~l 175 (467)
.|-|+|+| +|.|.- ||.+..+--.-|.+|+-.|+.+.|+ ++++...=+..|+..+|-||||....-+
T Consensus 111 ~AllVFaEHRyYGeS~PFG~~-s~k~~~hlgyLtseQALADfA~ll~-~lK~~~~a~~~pvIafGGSYGGMLaAWf 184 (492)
T KOG2183|consen 111 KALLVFAEHRYYGESLPFGSQ-SYKDARHLGYLTSEQALADFAELLT-FLKRDLSAEASPVIAFGGSYGGMLAAWF 184 (492)
T ss_pred CceEEEeehhccccCCCCcch-hccChhhhccccHHHHHHHHHHHHH-HHhhccccccCcEEEecCchhhHHHHHH
Confidence 45667776 577766 6654333333467888888876665 5555444457899999999999544443
No 127
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=78.24 E-value=4.7 Score=40.38 Aligned_cols=62 Identities=6% Similarity=-0.029 Sum_probs=45.9
Q ss_pred cCceEEEEeccCCcCCCchhHHHHHHHcCcccccccccCCCeeeEeCCCceeeeEEEEEcCEEEEEEcCCcccccCCCCc
Q 012237 364 KGVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFQVPVDQP 443 (467)
Q Consensus 364 ~~irVLiy~Gd~D~i~n~~g~~~~i~~L~W~g~~~f~~~~~~pw~~~~~~~~~G~~k~~~nltf~~V~~AGHm~vP~dqP 443 (467)
-..+||++.|+.|.++|....+.+.+.+.= .+.++.++ .+||+ .+.+.|
T Consensus 285 i~~Pvliv~G~~D~i~~~~~~~~~~~~~~~-----------------------------~~~~~~~~-~~gH~-~~~~~~ 333 (350)
T TIGR01836 285 IKMPILNIYAERDHLVPPDASKALNDLVSS-----------------------------EDYTELSF-PGGHI-GIYVSG 333 (350)
T ss_pred CCCCeEEEecCCCCcCCHHHHHHHHHHcCC-----------------------------CCeEEEEc-CCCCE-EEEECc
Confidence 368999999999999999988888887750 02233333 58999 888766
Q ss_pred ---HHHHHHHHHHhcC
Q 012237 444 ---CIALNMLAAMTDS 456 (467)
Q Consensus 444 ---~~a~~mi~~fl~~ 456 (467)
+.+..-+.+|+..
T Consensus 334 ~~~~~v~~~i~~wl~~ 349 (350)
T TIGR01836 334 KAQKEVPPAIGKWLQA 349 (350)
T ss_pred hhHhhhhHHHHHHHHh
Confidence 5667777788753
No 128
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=77.67 E-value=2.5 Score=38.61 Aligned_cols=65 Identities=23% Similarity=0.332 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHHHHHhC--cccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCCCCCc
Q 012237 135 VEAANDLTTLLMELFNKN--EILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISP 204 (467)
Q Consensus 135 ~~~a~d~~~fL~~f~~~f--p~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg~i~p 204 (467)
.+..+|..++++-..+.- -++...+++|+|+|=||+.+..++..+.+. +. ..++++++-.|++|.
T Consensus 46 p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SAGg~la~~~~~~~~~~---~~--~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 46 PAALEDVKAAYRWLLKNADKLGIDPERIVLIGDSAGGHLALSLALRARDR---GL--PKPKGIILISPWTDL 112 (211)
T ss_dssp THHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHT---TT--CHESEEEEESCHSST
T ss_pred cccccccccceeeeccccccccccccceEEeecccccchhhhhhhhhhhh---cc--cchhhhhcccccccc
Confidence 355566666665444320 124467999999999999999999766542 11 238999998887654
No 129
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=77.54 E-value=10 Score=37.16 Aligned_cols=44 Identities=25% Similarity=0.262 Sum_probs=33.5
Q ss_pred CCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCCCCCcc
Q 012237 157 KSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPE 205 (467)
Q Consensus 157 ~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg~i~p~ 205 (467)
.+++.|+|+|=||+.+..++...-+. + ....++.++.-|++|..
T Consensus 151 p~~i~v~GdSAGG~La~~~a~~~~~~---~--~~~p~~~~li~P~~d~~ 194 (312)
T COG0657 151 PSRIAVAGDSAGGHLALALALAARDR---G--LPLPAAQVLISPLLDLT 194 (312)
T ss_pred ccceEEEecCcccHHHHHHHHHHHhc---C--CCCceEEEEEecccCCc
Confidence 57899999999999999888776542 1 23577788877887754
No 130
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=76.94 E-value=3.1 Score=38.14 Aligned_cols=72 Identities=17% Similarity=0.124 Sum_probs=48.8
Q ss_pred ccccccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEee
Q 012237 118 GTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVAL 197 (467)
Q Consensus 118 GtGFSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~I 197 (467)
-|||-+++. +.+.+++..++..+++=-|+.+|.- +.+-+.|+|-|.|.+.....++-. -.+.|+++
T Consensus 102 svgY~l~~q----~htL~qt~~~~~~gv~filk~~~n~--k~l~~gGHSaGAHLa~qav~R~r~--------prI~gl~l 167 (270)
T KOG4627|consen 102 SVGYNLCPQ----VHTLEQTMTQFTHGVNFILKYTENT--KVLTFGGHSAGAHLAAQAVMRQRS--------PRIWGLIL 167 (270)
T ss_pred EeccCcCcc----cccHHHHHHHHHHHHHHHHHhcccc--eeEEEcccchHHHHHHHHHHHhcC--------chHHHHHH
Confidence 456666543 4578888888999998777777764 359999999999876655554321 14667776
Q ss_pred cCCCCC
Q 012237 198 GDSWIS 203 (467)
Q Consensus 198 GNg~i~ 203 (467)
-.|+-+
T Consensus 168 ~~GvY~ 173 (270)
T KOG4627|consen 168 LCGVYD 173 (270)
T ss_pred HhhHhh
Confidence 555543
No 131
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=76.78 E-value=1.4 Score=44.01 Aligned_cols=71 Identities=20% Similarity=0.229 Sum_probs=48.5
Q ss_pred ccccceeecCCCccccccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHHHH
Q 012237 106 KKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVK 181 (467)
Q Consensus 106 ~~anvlfiDqPvGtGFSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~ 181 (467)
...|||.||--.|..-.|.. .+.+...+++.+-.||+.....+ .+...++||.|+|.|+|.+=..++++..
T Consensus 103 ~d~NVI~VDWs~~a~~~Y~~----a~~n~~~vg~~la~~l~~L~~~~-g~~~~~ihlIGhSLGAHvaG~aG~~~~~ 173 (331)
T PF00151_consen 103 GDYNVIVVDWSRGASNNYPQ----AVANTRLVGRQLAKFLSFLINNF-GVPPENIHLIGHSLGAHVAGFAGKYLKG 173 (331)
T ss_dssp S-EEEEEEE-HHHHSS-HHH----HHHHHHHHHHHHHHHHHHHHHHH----GGGEEEEEETCHHHHHHHHHHHTTT
T ss_pred CCceEEEEcchhhccccccc----hhhhHHHHHHHHHHHHHHHHhhc-CCChhHEEEEeeccchhhhhhhhhhccC
Confidence 36899999987666554432 24566778888888888776432 3335789999999999988888776543
No 132
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=76.03 E-value=5.9 Score=41.01 Aligned_cols=91 Identities=19% Similarity=0.138 Sum_probs=52.0
Q ss_pred cccceeecCCCcccccccc----CCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHH
Q 012237 107 KADLLFVDNPVGTGYSYVE----DNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKA 182 (467)
Q Consensus 107 ~anvlfiDqPvGtGFSy~~----~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~ 182 (467)
.|-||++|.- =-|-|... .++--.-|.+++-.|+..|++.+-.++....+.|+.++|-||||..+.-+-.+-.+
T Consensus 59 ~a~~v~lEHR-yYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~- 136 (434)
T PF05577_consen 59 GALVVALEHR-YYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPH- 136 (434)
T ss_dssp TEEEEEE--T-TSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TT-
T ss_pred CCcEEEeehh-hhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCC-
Confidence 4556777755 45555421 11222357899999999999988877766678899999999999544433322111
Q ss_pred HHcCcceeeeeeEeecCCCCCccch
Q 012237 183 IEAGKLKLKLGGVALGDSWISPEDF 207 (467)
Q Consensus 183 ~~~~~~~inLkGi~IGNg~i~p~~~ 207 (467)
-+.|.+--.+-+.....
T Consensus 137 --------~~~ga~ASSapv~a~~d 153 (434)
T PF05577_consen 137 --------LFDGAWASSAPVQAKVD 153 (434)
T ss_dssp --------T-SEEEEET--CCHCCT
T ss_pred --------eeEEEEeccceeeeecc
Confidence 35566665666655433
No 133
>PRK04940 hypothetical protein; Provisional
Probab=75.81 E-value=7.4 Score=35.06 Aligned_cols=37 Identities=22% Similarity=0.423 Sum_probs=30.7
Q ss_pred CCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCCCCCccc
Q 012237 158 SPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPED 206 (467)
Q Consensus 158 ~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg~i~p~~ 206 (467)
.++.|.|-|-||.|+-.+|.+- .++.|.| ||.+.|..
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~-----------g~~aVLi-NPAv~P~~ 96 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLC-----------GIRQVIF-NPNLFPEE 96 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHH-----------CCCEEEE-CCCCChHH
Confidence 4799999999999999888653 6777776 99999864
No 134
>PLN02324 triacylglycerol lipase
Probab=75.61 E-value=8.5 Score=39.32 Aligned_cols=71 Identities=14% Similarity=0.140 Sum_probs=47.9
Q ss_pred ChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHc------CcceeeeeeEeecCCCCCc
Q 012237 133 NDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEA------GKLKLKLGGVALGDSWISP 204 (467)
Q Consensus 133 ~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~------~~~~inLkGi~IGNg~i~p 204 (467)
+...+.+++..-|+.+.+.+|.. ...++|+|||-||-.+-..|..|.+.... ....+++.-+.-|.|-+..
T Consensus 191 ~k~SareqVl~eV~~L~~~Yp~e-~~sItvTGHSLGGALAtLaA~dl~~~~~n~~~~~~~~~~~~V~v~TFGsPRVGN 267 (415)
T PLN02324 191 DTTSAQEQVQGELKRLLELYKNE-EISITFTGHSLGAVMSVLSAADLVYGKKNKINISLQKKQVPITVFAFGSPRIGD 267 (415)
T ss_pred chhHHHHHHHHHHHHHHHHCCCC-CceEEEecCcHHHHHHHHHHHHHHHhcccccccccccCCCceEEEEecCCCcCC
Confidence 34567888889999999888753 34799999999998888777777652110 0123345555566666543
No 135
>PLN02753 triacylglycerol lipase
Probab=75.49 E-value=8 Score=40.59 Aligned_cols=73 Identities=11% Similarity=0.100 Sum_probs=51.3
Q ss_pred ChHHHHHHHHHHHHHHHHhCcc--cCCCCEEEEecccCcchHHHHHHHHHHHH--H-cCcceeeeeeEeecCCCCCcc
Q 012237 133 NDVEAANDLTTLLMELFNKNEI--LQKSPLFIVAESYGGKFAATLGLAAVKAI--E-AGKLKLKLGGVALGDSWISPE 205 (467)
Q Consensus 133 ~~~~~a~d~~~fL~~f~~~fp~--~~~~~~yi~GESYgG~yvP~lA~~i~~~~--~-~~~~~inLkGi~IGNg~i~p~ 205 (467)
+...+.+++...++...+.+|. .....++|+|+|-||-.+-..|..|.+.. + .....+++.-+..|.|-+...
T Consensus 285 ~k~S~reQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~Dla~~g~n~~~~~~~~pV~vyTFGsPRVGN~ 362 (531)
T PLN02753 285 AKFSAREQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYDIAEMGLNRSKKGKVIPVTVLTYGGPRVGNV 362 (531)
T ss_pred chhhHHHHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHHHHHhcccccccCccCceEEEEeCCCCccCH
Confidence 4567888999999999988764 23468999999999988888887776421 1 111234566677777777643
No 136
>PLN02719 triacylglycerol lipase
Probab=74.78 E-value=8.3 Score=40.34 Aligned_cols=73 Identities=11% Similarity=0.130 Sum_probs=51.0
Q ss_pred ChHHHHHHHHHHHHHHHHhCccc--CCCCEEEEecccCcchHHHHHHHHHHHH--Hc-CcceeeeeeEeecCCCCCcc
Q 012237 133 NDVEAANDLTTLLMELFNKNEIL--QKSPLFIVAESYGGKFAATLGLAAVKAI--EA-GKLKLKLGGVALGDSWISPE 205 (467)
Q Consensus 133 ~~~~~a~d~~~fL~~f~~~fp~~--~~~~~yi~GESYgG~yvP~lA~~i~~~~--~~-~~~~inLkGi~IGNg~i~p~ 205 (467)
+...+.+++...++...+.+|+. ....++|+|+|-||-.+-..|..|.+.. +. ....+++.-+..|.|-+...
T Consensus 271 ~k~SaReQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~Dl~~~gln~~~~~~~~pVtvyTFGsPRVGN~ 348 (518)
T PLN02719 271 SKFSAREQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYDVAEMGLNRTRKGKVIPVTAFTYGGPRVGNI 348 (518)
T ss_pred cchhHHHHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHHHHHhcccccccccccceEEEEecCCCccCH
Confidence 34567888999999999988865 2457999999999988888887776531 10 11123455677777777543
No 137
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=73.07 E-value=5.2 Score=37.92 Aligned_cols=61 Identities=23% Similarity=0.239 Sum_probs=45.6
Q ss_pred ceEEEEeccCCcCCCchhHHHHHHHcCcccccccccCCCeeeEeCCCceeeeEEEEEcCEEEEEEcCCcccccCCCCcHH
Q 012237 366 VNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFQVPVDQPCI 445 (467)
Q Consensus 366 irVLiy~Gd~D~i~n~~g~~~~i~~L~W~g~~~f~~~~~~pw~~~~~~~~~G~~k~~~nltf~~V~~AGHm~vP~dqP~~ 445 (467)
.+|||++|..|-++|+....+.....+= .....+|+||||- -..--| .
T Consensus 193 ~PVLiiHgtdDevv~~sHg~~Lye~~k~------------------------------~~epl~v~g~gH~-~~~~~~-~ 240 (258)
T KOG1552|consen 193 CPVLIIHGTDDEVVDFSHGKALYERCKE------------------------------KVEPLWVKGAGHN-DIELYP-E 240 (258)
T ss_pred CCEEEEecccCceecccccHHHHHhccc------------------------------cCCCcEEecCCCc-ccccCH-H
Confidence 4999999999999998877666655541 1233679999999 766655 6
Q ss_pred HHHHHHHHhcCCC
Q 012237 446 ALNMLAAMTDSPA 458 (467)
Q Consensus 446 a~~mi~~fl~~~~ 458 (467)
-.+.+++|++...
T Consensus 241 yi~~l~~f~~~~~ 253 (258)
T KOG1552|consen 241 YIEHLRRFISSVL 253 (258)
T ss_pred HHHHHHHHHHHhc
Confidence 6778888887654
No 138
>PLN02761 lipase class 3 family protein
Probab=72.89 E-value=10 Score=39.86 Aligned_cols=73 Identities=8% Similarity=0.091 Sum_probs=50.0
Q ss_pred ChHHHHHHHHHHHHHHHHhCccc-C--CCCEEEEecccCcchHHHHHHHHHHHHH----cCcceeeeeeEeecCCCCCcc
Q 012237 133 NDVEAANDLTTLLMELFNKNEIL-Q--KSPLFIVAESYGGKFAATLGLAAVKAIE----AGKLKLKLGGVALGDSWISPE 205 (467)
Q Consensus 133 ~~~~~a~d~~~fL~~f~~~fp~~-~--~~~~yi~GESYgG~yvP~lA~~i~~~~~----~~~~~inLkGi~IGNg~i~p~ 205 (467)
+...+.+++...++...+.+|.. + ...++|+|+|.||-.+-..|..|....- .....+++.-+..|.|-+...
T Consensus 266 ~k~SaR~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~DIa~~gln~~~~~~~~~PVtv~TFGsPRVGN~ 345 (527)
T PLN02761 266 SSFSAREQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYDIAELNLNHVPENNYKIPITVFSFSGPRVGNL 345 (527)
T ss_pred cchhHHHHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHHHHHhccccccccccCCceEEEEcCCCCcCCH
Confidence 34567888999999998888532 1 3469999999999888777777754211 112344566777777777643
No 139
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=71.20 E-value=8.2 Score=36.38 Aligned_cols=68 Identities=18% Similarity=0.130 Sum_probs=42.2
Q ss_pred hHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCCCCCc
Q 012237 134 DVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISP 204 (467)
Q Consensus 134 ~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg~i~p 204 (467)
....+..|.+||+...+.. ..++++|.++|.|++-+-..-..+.......+..-.|..|++-+|-++.
T Consensus 72 a~~s~~~l~~~L~~L~~~~---~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~ 139 (233)
T PF05990_consen 72 ARFSGPALARFLRDLARAP---GIKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDN 139 (233)
T ss_pred HHHHHHHHHHHHHHHHhcc---CCceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCH
Confidence 3445555666665554421 3579999999999987766555544332110122378888887777764
No 140
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=70.57 E-value=38 Score=32.45 Aligned_cols=87 Identities=15% Similarity=0.158 Sum_probs=52.9
Q ss_pred CEEEEEcCCCChhhhhcccccccCCCcccCCCCCcchhccccceeecCCCccccccccCCCCcccChHHHHHHHHHHHHH
Q 012237 68 PIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLME 147 (467)
Q Consensus 68 PlilWlnGGPG~SS~~~g~f~E~GP~~~~l~~n~~sW~~~anvlfiDqPvGtGFSy~~~~~~~~~~~~~~a~d~~~fL~~ 147 (467)
|.++|++++=|.-..+..|-.+++| ..-++-++.| |-|.- .....+.++.+..-...|+
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~--------------~~~v~~l~a~-g~~~~-----~~~~~~l~~~a~~yv~~Ir- 59 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGP--------------LLPVYGLQAP-GYGAG-----EQPFASLDDMAAAYVAAIR- 59 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhcc--------------CceeeccccC-ccccc-----ccccCCHHHHHHHHHHHHH-
Confidence 5678888876664332222233333 2335667777 54421 1224567777775555554
Q ss_pred HHHhCcccCCCCEEEEecccCcchHHHHHHHHH
Q 012237 148 LFNKNEILQKSPLFIVAESYGGKFAATLGLAAV 180 (467)
Q Consensus 148 f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~ 180 (467)
+..|+ =|.+|.|-|+||.-+=.+|.++.
T Consensus 60 --~~QP~---GPy~L~G~S~GG~vA~evA~qL~ 87 (257)
T COG3319 60 --RVQPE---GPYVLLGWSLGGAVAFEVAAQLE 87 (257)
T ss_pred --HhCCC---CCEEEEeeccccHHHHHHHHHHH
Confidence 56776 39999999999976666666554
No 141
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=70.30 E-value=13 Score=33.10 Aligned_cols=76 Identities=18% Similarity=0.237 Sum_probs=46.9
Q ss_pred ccccceeecCCCccccccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHc
Q 012237 106 KKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEA 185 (467)
Q Consensus 106 ~~anvlfiDqPvGtGFSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~ 185 (467)
...+++-+|.| |.|.+.. ...+.+..++.....++. ..+ ..++.++|+|+||..+-.++.++.+.
T Consensus 24 ~~~~v~~~~~~-g~~~~~~-----~~~~~~~~~~~~~~~l~~---~~~---~~~~~l~g~s~Gg~~a~~~a~~l~~~--- 88 (212)
T smart00824 24 GRRDVSALPLP-GFGPGEP-----LPASADALVEAQAEAVLR---AAG---GRPFVLVGHSSGGLLAHAVAARLEAR--- 88 (212)
T ss_pred CCccEEEecCC-CCCCCCC-----CCCCHHHHHHHHHHHHHH---hcC---CCCeEEEEECHHHHHHHHHHHHHHhC---
Confidence 34678889988 6665422 223445555555544442 222 46899999999998887777765432
Q ss_pred CcceeeeeeEeecC
Q 012237 186 GKLKLKLGGVALGD 199 (467)
Q Consensus 186 ~~~~inLkGi~IGN 199 (467)
+ ..++++++.+
T Consensus 89 ~---~~~~~l~~~~ 99 (212)
T smart00824 89 G---IPPAAVVLLD 99 (212)
T ss_pred C---CCCcEEEEEc
Confidence 2 1356666543
No 142
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=68.77 E-value=8.7 Score=38.41 Aligned_cols=78 Identities=8% Similarity=0.016 Sum_probs=47.0
Q ss_pred cccceeecCCCccccccccCCCCcccChHHHH-HHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHc
Q 012237 107 KADLLFVDNPVGTGYSYVEDNSSFVKNDVEAA-NDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEA 185 (467)
Q Consensus 107 ~anvlfiDqPvGtGFSy~~~~~~~~~~~~~~a-~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~ 185 (467)
-.+++-+|-. |-|.|.. ..+.++.+ .++-.+++...+..+ ..++++.|+|+||..+..++....+
T Consensus 94 G~~V~~~D~~-g~g~s~~------~~~~~d~~~~~~~~~v~~l~~~~~---~~~i~lvGhS~GG~i~~~~~~~~~~---- 159 (350)
T TIGR01836 94 GQDVYLIDWG-YPDRADR------YLTLDDYINGYIDKCVDYICRTSK---LDQISLLGICQGGTFSLCYAALYPD---- 159 (350)
T ss_pred CCeEEEEeCC-CCCHHHh------cCCHHHHHHHHHHHHHHHHHHHhC---CCcccEEEECHHHHHHHHHHHhCch----
Confidence 3578888865 6565531 11333333 345555555555443 4689999999999876655533111
Q ss_pred CcceeeeeeEeecCCCCC
Q 012237 186 GKLKLKLGGVALGDSWIS 203 (467)
Q Consensus 186 ~~~~inLkGi~IGNg~i~ 203 (467)
.++++++-++.++
T Consensus 160 -----~v~~lv~~~~p~~ 172 (350)
T TIGR01836 160 -----KIKNLVTMVTPVD 172 (350)
T ss_pred -----heeeEEEeccccc
Confidence 4788887666665
No 143
>PLN02934 triacylglycerol lipase
Probab=68.36 E-value=13 Score=38.97 Aligned_cols=39 Identities=18% Similarity=0.281 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHHH
Q 012237 139 NDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAV 180 (467)
Q Consensus 139 ~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~ 180 (467)
.++...|+++.+.+|++ +++++|+|-||-.+-..|..+.
T Consensus 305 ~~v~~~lk~ll~~~p~~---kIvVTGHSLGGALAtLaA~~L~ 343 (515)
T PLN02934 305 YAVRSKLKSLLKEHKNA---KFVVTGHSLGGALAILFPTVLV 343 (515)
T ss_pred HHHHHHHHHHHHHCCCC---eEEEeccccHHHHHHHHHHHHH
Confidence 34677788888888864 7999999999987777765554
No 144
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=68.19 E-value=8.3 Score=35.73 Aligned_cols=45 Identities=13% Similarity=0.121 Sum_probs=33.6
Q ss_pred HHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCCC
Q 012237 147 ELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSW 201 (467)
Q Consensus 147 ~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg~ 201 (467)
+|+..+|+-...++-|.|-|.||-.+..+|.+.. .++.++.-+|.
T Consensus 11 ~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~----------~i~avVa~~ps 55 (213)
T PF08840_consen 11 DWLKSHPEVDPDKIGIIGISKGAELALLLASRFP----------QISAVVAISPS 55 (213)
T ss_dssp HHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS----------SEEEEEEES--
T ss_pred HHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC----------CccEEEEeCCc
Confidence 5888999998899999999999988888887642 57777775543
No 145
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=67.26 E-value=17 Score=34.03 Aligned_cols=86 Identities=15% Similarity=0.146 Sum_probs=53.8
Q ss_pred cceeecCCCccccccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcc
Q 012237 109 DLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKL 188 (467)
Q Consensus 109 nvlfiDqPvGtGFSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~ 188 (467)
+...|+-|.+.+-=..-..-.+..+..+.++.+...++.+.. ..+++.|+|.|-|+.-+-....++.+. +..
T Consensus 4 ~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~-----~~~~vvV~GySQGA~Va~~~~~~l~~~---~~~ 75 (225)
T PF08237_consen 4 NVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIA-----AGGPVVVFGYSQGAVVASNVLRRLAAD---GDP 75 (225)
T ss_pred ceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhcc-----CCCCEEEEEECHHHHHHHHHHHHHHhc---CCC
Confidence 344566665433211111112455677778888888887665 478999999999996655555555432 211
Q ss_pred -eeeeeeEeecCCCC
Q 012237 189 -KLKLGGVALGDSWI 202 (467)
Q Consensus 189 -~inLkGi~IGNg~i 202 (467)
.-+++-+.+||+.-
T Consensus 76 ~~~~l~fVl~gnP~r 90 (225)
T PF08237_consen 76 PPDDLSFVLIGNPRR 90 (225)
T ss_pred CcCceEEEEecCCCC
Confidence 13789999999854
No 146
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=66.95 E-value=11 Score=36.44 Aligned_cols=36 Identities=22% Similarity=0.266 Sum_probs=30.3
Q ss_pred hHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccCc
Q 012237 134 DVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGG 169 (467)
Q Consensus 134 ~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG 169 (467)
-.++++.|.+.+..-...-|+=+.-++|++|||-|.
T Consensus 85 a~~a~~aL~~aV~~~~~~lP~~~RPkL~l~GeSLGa 120 (289)
T PF10081_consen 85 AREAARALFEAVYARWSTLPEDRRPKLYLYGESLGA 120 (289)
T ss_pred HHHHHHHHHHHHHHHHHhCCcccCCeEEEeccCccc
Confidence 467888899999998888888665669999999885
No 147
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=66.86 E-value=14 Score=28.27 Aligned_cols=77 Identities=19% Similarity=0.323 Sum_probs=48.9
Q ss_pred eEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhcccccccCCCcccCCCCCcchhccccceeecCCCccccccccCC
Q 012237 48 HMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDN 127 (467)
Q Consensus 48 ~lFywf~es~~~~~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~l~~n~~sW~~~anvlfiDqPvGtGFSy~~~~ 127 (467)
.||+..+..+ ++ .+.+|+.++|--..|.- +.-| .... + .+-.+|+-+|++ |.|.|....
T Consensus 3 ~L~~~~w~p~----~~--~k~~v~i~HG~~eh~~r-y~~~---a~~L-----~----~~G~~V~~~D~r-GhG~S~g~r- 61 (79)
T PF12146_consen 3 KLFYRRWKPE----NP--PKAVVVIVHGFGEHSGR-YAHL---AEFL-----A----EQGYAVFAYDHR-GHGRSEGKR- 61 (79)
T ss_pred EEEEEEecCC----CC--CCEEEEEeCCcHHHHHH-HHHH---HHHH-----H----hCCCEEEEECCC-cCCCCCCcc-
Confidence 5777777632 22 25899999987444443 3222 1110 1 134568889999 999997543
Q ss_pred CCcccChHHHHHHHHHHHH
Q 012237 128 SSFVKNDVEAANDLTTLLM 146 (467)
Q Consensus 128 ~~~~~~~~~~a~d~~~fL~ 146 (467)
....+-++..+|+..|++
T Consensus 62 -g~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 62 -GHIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred -cccCCHHHHHHHHHHHhC
Confidence 346677888888887764
No 148
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=66.68 E-value=45 Score=32.31 Aligned_cols=93 Identities=16% Similarity=0.125 Sum_probs=53.6
Q ss_pred cHHHHHHHHhcCceEEEEeccCCcCCCchhHHHHHHHcCcccccccccCCCeeeEeCCCce---eeeEEEEEcCEEEEEE
Q 012237 354 RISEVDELLAKGVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKI---TKGFKKSYKNLHFYWI 430 (467)
Q Consensus 354 ~~~~l~~LL~~~irVLiy~Gd~D~i~n~~g~~~~i~~L~W~g~~~f~~~~~~pw~~~~~~~---~~G~~k~~~nltf~~V 430 (467)
..+.|+.|-++.+||||..|-.|.++--.=..+.+... .+.+.|.-... ..+++ +.=-..+...-.-|.|
T Consensus 201 q~~~I~~ln~~~ikvli~ygg~DhLIEeeI~~E~a~~f--~~l~Hf~~~~~-----~seee~~kI~~~f~~~~~~~sv~f 273 (297)
T PF06342_consen 201 QKEYIDKLNKKPIKVLIAYGGKDHLIEEEISFEFAMKF--KGLDHFNIEKE-----ISEEEKPKILKSFASGQKGASVFF 273 (297)
T ss_pred HHHHHHHhccCCCcEEEEEcCcchhhHHHHHHHHHHHh--CCccceeeecC-----CChhHHHHHHHHHhcCCceeEEEE
Confidence 35667777788899999999999998544444444433 34444422110 00000 0000011123445778
Q ss_pred cCCcccccCCCCcHHHHHHHHHHh
Q 012237 431 LGAGHFQVPVDQPCIALNMLAAMT 454 (467)
Q Consensus 431 ~~AGHm~vP~dqP~~a~~mi~~fl 454 (467)
.+-||. .--.||+-.-+.+.+.+
T Consensus 274 ~~dgHf-~qK~~A~lIA~~i~~mf 296 (297)
T PF06342_consen 274 AKDGHF-QQKFRADLIAEAIKKMF 296 (297)
T ss_pred ecCChH-HhHHHHHHHHHHHHHhh
Confidence 899999 88888877666665543
No 149
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=66.36 E-value=58 Score=36.03 Aligned_cols=157 Identities=17% Similarity=0.216 Sum_probs=82.8
Q ss_pred hHHHHHHHHHHhhhhcCcccccccCCCCCCCceeeeeEeCCC-----ceEEEEEE-E-cCC--CCCCCCCCCCEEEEEcC
Q 012237 5 CGFVATLLFLVSLLFNGGAAARALNKNQDASEEWGYVEVRPK-----AHMFWWLY-K-SPY--RIENPSKPWPIILWLQG 75 (467)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sGyv~v~~~-----~~lFywf~-e-s~~--~~~~~~~~~PlilWlnG 75 (467)
+.+++.++.++++..--++.+..|..+.=.+.|.-+++++.. .++-++.| | |+. +...+... --||++-|
T Consensus 19 ~liia~ll~l~ll~~f~g~~en~CsmtYMypsy~r~i~i~~r~t~~a~kY~LYLY~Egs~~~e~~~lelsG-IPVLFIPG 97 (973)
T KOG3724|consen 19 ALIIAVLLGLGLLLHFLGHQENGCSMTYMYPSYYRFIEIPERLTPQADKYSLYLYREGSRWWERSTLELSG-IPVLFIPG 97 (973)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCceeEEEeccceeecCCcccccCCCCceEEEEecccccccccccccCCC-ceEEEecC
Confidence 344566666666666666777666655555555555666531 24444444 3 211 11222233 23678888
Q ss_pred CCCh-------hhhhcccccccCCCccc-CCCCCcchhccccceeecCCCccccccccCCCCcccChHHHHHHHHHHHHH
Q 012237 76 GPGA-------SGVGIGNFEEVGPFDTY-LKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLME 147 (467)
Q Consensus 76 GPG~-------SS~~~g~f~E~GP~~~~-l~~n~~sW~~~anvlfiDqPvGtGFSy~~~~~~~~~~~~~~a~d~~~fL~~ 147 (467)
--|. .|. ..+-...||++-. -+.|+++. ++. =+|= .==||- -.-.+..+.++.+.++++.
T Consensus 98 NAGSyKQvRSiAS~-a~n~y~~~~~e~t~~~d~~~~~-DFF---aVDF--nEe~tA-----m~G~~l~dQtEYV~dAIk~ 165 (973)
T KOG3724|consen 98 NAGSYKQVRSIASV-AQNAYQGGPFEKTEDRDNPFSF-DFF---AVDF--NEEFTA-----MHGHILLDQTEYVNDAIKY 165 (973)
T ss_pred CCCchHHHHHHHHH-HhhhhcCCchhhhhcccCcccc-ceE---EEcc--cchhhh-----hccHhHHHHHHHHHHHHHH
Confidence 7774 222 2455678888743 23455554 111 1110 000110 0122456667777777665
Q ss_pred HHH---hCcccC---CCCEEEEecccCcchHHH
Q 012237 148 LFN---KNEILQ---KSPLFIVAESYGGKFAAT 174 (467)
Q Consensus 148 f~~---~fp~~~---~~~~yi~GESYgG~yvP~ 174 (467)
-++ .-+||+ ...+.|.|+||||.-+-.
T Consensus 166 ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra 198 (973)
T KOG3724|consen 166 ILSLYRGEREYASPLPHSVILVGHSMGGIVARA 198 (973)
T ss_pred HHHHhhcccccCCCCCceEEEEeccchhHHHHH
Confidence 554 345565 556999999999965443
No 150
>PRK11071 esterase YqiA; Provisional
Probab=65.47 E-value=15 Score=33.32 Aligned_cols=76 Identities=22% Similarity=0.296 Sum_probs=47.8
Q ss_pred CEEEEEcCCCChhhhhcc-cccccCCCcccCCCCCcchhc---cccceeecCCCccccccccCCCCcccChHHHHHHHHH
Q 012237 68 PIILWLQGGPGASGVGIG-NFEEVGPFDTYLKPRNSTWLK---KADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTT 143 (467)
Q Consensus 68 PlilWlnGGPG~SS~~~g-~f~E~GP~~~~l~~n~~sW~~---~anvlfiDqPvGtGFSy~~~~~~~~~~~~~~a~d~~~ 143 (467)
|.||+|+|-+|++..+-. .+. .-+.+ ..+++.+|.| |.| ++.++
T Consensus 2 p~illlHGf~ss~~~~~~~~~~-------------~~l~~~~~~~~v~~~dl~-g~~--------------~~~~~---- 49 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLK-------------NWLAQHHPDIEMIVPQLP-PYP--------------ADAAE---- 49 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHH-------------HHHHHhCCCCeEEeCCCC-CCH--------------HHHHH----
Confidence 789999998887765311 010 00111 3567889988 432 23444
Q ss_pred HHHHHHHhCcccCCCCEEEEecccCcchHHHHHHH
Q 012237 144 LLMELFNKNEILQKSPLFIVAESYGGKFAATLGLA 178 (467)
Q Consensus 144 fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~ 178 (467)
++.++.+. +..++++|.|.|.||.++-.+|.+
T Consensus 50 ~l~~l~~~---~~~~~~~lvG~S~Gg~~a~~~a~~ 81 (190)
T PRK11071 50 LLESLVLE---HGGDPLGLVGSSLGGYYATWLSQC 81 (190)
T ss_pred HHHHHHHH---cCCCCeEEEEECHHHHHHHHHHHH
Confidence 44455543 334689999999999888877754
No 151
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=65.21 E-value=12 Score=38.93 Aligned_cols=42 Identities=17% Similarity=0.213 Sum_probs=32.1
Q ss_pred hHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHH
Q 012237 134 DVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLA 178 (467)
Q Consensus 134 ~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~ 178 (467)
.++..+++.+.++..++..+ .+++.|.|+|.||..+-.++..
T Consensus 141 ~~~~~~~Lk~lIe~~~~~~g---~~kV~LVGHSMGGlva~~fl~~ 182 (440)
T PLN02733 141 LPETMDGLKKKLETVYKASG---GKKVNIISHSMGGLLVKCFMSL 182 (440)
T ss_pred HHHHHHHHHHHHHHHHHHcC---CCCEEEEEECHhHHHHHHHHHH
Confidence 35566778888888887543 5799999999999777766643
No 152
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=64.31 E-value=17 Score=34.48 Aligned_cols=106 Identities=17% Similarity=0.231 Sum_probs=63.4
Q ss_pred CCEEEEEcCCCChh-hhhcccccccCCCcccCCCCCcchhccccceeecCCCccccccccCCCCcccChHHHHHHHHHHH
Q 012237 67 WPIILWLQGGPGAS-GVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLL 145 (467)
Q Consensus 67 ~PlilWlnGGPG~S-S~~~g~f~E~GP~~~~l~~n~~sW~~~anvlfiDqPvGtGFSy~~~~~~~~~~~~~~a~d~~~fL 145 (467)
.+.+|+.+|--.-= -| ..+|.| .|=.=..|+.=.|-- |-|.|.++..+. +.-+-.+..|++|
T Consensus 60 ~~~lly~hGNa~Dlgq~-~~~~~~------------l~~~ln~nv~~~DYS-GyG~S~G~psE~---n~y~Di~avye~L 122 (258)
T KOG1552|consen 60 HPTLLYSHGNAADLGQM-VELFKE------------LSIFLNCNVVSYDYS-GYGRSSGKPSER---NLYADIKAVYEWL 122 (258)
T ss_pred ceEEEEcCCcccchHHH-HHHHHH------------HhhcccceEEEEecc-cccccCCCcccc---cchhhHHHHHHHH
Confidence 49999999871100 11 222322 222234566667766 999998764432 3333344456666
Q ss_pred HHHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCCCCCcc
Q 012237 146 MELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPE 205 (467)
Q Consensus 146 ~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg~i~p~ 205 (467)
++=+. +..++.|+|.|-|-.=.-.+|.+ . .+.|+++-+|+++-.
T Consensus 123 r~~~g-----~~~~Iil~G~SiGt~~tv~Lasr---------~--~~~alVL~SPf~S~~ 166 (258)
T KOG1552|consen 123 RNRYG-----SPERIILYGQSIGTVPTVDLASR---------Y--PLAAVVLHSPFTSGM 166 (258)
T ss_pred HhhcC-----CCceEEEEEecCCchhhhhHhhc---------C--CcceEEEeccchhhh
Confidence 64221 45799999999996432233322 2 399999988888743
No 153
>COG0627 Predicted esterase [General function prediction only]
Probab=63.55 E-value=16 Score=36.16 Aligned_cols=125 Identities=19% Similarity=0.164 Sum_probs=67.2
Q ss_pred CCCCEEEEEcCCCChhhhhcccccccCCCccc--------CCCCCcchhccccceeecCCCccccccccCCCCcccChHH
Q 012237 65 KPWPIILWLQGGPGASGVGIGNFEEVGPFDTY--------LKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVE 136 (467)
Q Consensus 65 ~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~--------l~~n~~sW~~~anvlfiDqPvGtGFSy~~~~~~~~~~~~~ 136 (467)
++-|+ +|+.+|..|.. =.+.+.++.+-. ..+.-.-+....++-=|+ |+|.|.|+-.+.........
T Consensus 52 ~~ipV-~~~l~G~t~~~---~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~-p~G~~~sfY~d~~~~~~~~~- 125 (316)
T COG0627 52 RDIPV-LYLLSGLTCNE---PNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVM-PLGGGASFYSDWTQPPWASG- 125 (316)
T ss_pred CCCCE-EEEeCCCCCCC---CceEeccchhhhhhhcCeEEecCCCCcccCCCCccccc-cCCCccceecccccCccccC-
Confidence 34355 55555778874 234555555421 111122244444444445 68999987543221111111
Q ss_pred HHHHHHHHHH-----HHHHhCcccCC-CCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCCCCCcc
Q 012237 137 AANDLTTLLM-----ELFNKNEILQK-SPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPE 205 (467)
Q Consensus 137 ~a~d~~~fL~-----~f~~~fp~~~~-~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg~i~p~ 205 (467)
..+.+.||. .|.+.||--.. ..-.|+|.|.||+=+-.+|.+-.+ .++.++-=.|+++|.
T Consensus 126 -~~q~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd---------~f~~~sS~Sg~~~~s 190 (316)
T COG0627 126 -PYQWETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPD---------RFKSASSFSGILSPS 190 (316)
T ss_pred -ccchhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcc---------hhceecccccccccc
Confidence 244444443 45555663321 368899999999988888766332 356666656666664
No 154
>PLN02408 phospholipase A1
Probab=63.46 E-value=20 Score=36.19 Aligned_cols=65 Identities=11% Similarity=0.109 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCCCCC
Q 012237 135 VEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWIS 203 (467)
Q Consensus 135 ~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg~i~ 203 (467)
..+.+++.+-++.+.+.+|+. ...++|+|+|.||-.+-..|..|.+... .. ..+.-+..|.|-+.
T Consensus 178 ~s~r~qVl~eI~~ll~~y~~~-~~sI~vTGHSLGGALAtLaA~dl~~~~~--~~-~~V~v~tFGsPRVG 242 (365)
T PLN02408 178 PSLQEMVREEIARLLQSYGDE-PLSLTITGHSLGAALATLTAYDIKTTFK--RA-PMVTVISFGGPRVG 242 (365)
T ss_pred hhHHHHHHHHHHHHHHhcCCC-CceEEEeccchHHHHHHHHHHHHHHhcC--CC-CceEEEEcCCCCcc
Confidence 366778888889988888864 3469999999999888777777654211 10 12445556666554
No 155
>PRK14567 triosephosphate isomerase; Provisional
Probab=61.87 E-value=13 Score=35.45 Aligned_cols=62 Identities=18% Similarity=0.289 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCCCCCccc
Q 012237 135 VEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPED 206 (467)
Q Consensus 135 ~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg~i~p~~ 206 (467)
.+.+++++.++++++..+-+-....+=|. |||.--|.=+..|++. -++.|+.||.+.++|..
T Consensus 178 ~e~i~~~~~~IR~~l~~~~~~~a~~v~Il---YGGSV~~~N~~~l~~~-------~diDG~LVGgasL~~~~ 239 (253)
T PRK14567 178 LEQIQETHQFIRSLLAKVDERLAKNIKIV---YGGSLKAENAKDILSL-------PDVDGGLIGGASLKAAE 239 (253)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccceEE---EcCcCCHHHHHHHHcC-------CCCCEEEeehhhhcHHH
Confidence 45677789999999876422112234444 9999999988888753 26999999999998754
No 156
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=61.64 E-value=20 Score=33.61 Aligned_cols=49 Identities=18% Similarity=0.242 Sum_probs=32.4
Q ss_pred HHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCC
Q 012237 143 TLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDS 200 (467)
Q Consensus 143 ~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg 200 (467)
++|+.....+++ +++|+|||=||..+-+.|..+.+..+. .++.+..-||
T Consensus 73 ~yl~~~~~~~~~----~i~v~GHSkGGnLA~yaa~~~~~~~~~-----rI~~vy~fDg 121 (224)
T PF11187_consen 73 AYLKKIAKKYPG----KIYVTGHSKGGNLAQYAAANCDDEIQD-----RISKVYSFDG 121 (224)
T ss_pred HHHHHHHHhCCC----CEEEEEechhhHHHHHHHHHccHHHhh-----heeEEEEeeC
Confidence 566666665554 699999999998888777665443221 4555555443
No 157
>PLN02310 triacylglycerol lipase
Probab=61.46 E-value=23 Score=36.24 Aligned_cols=66 Identities=17% Similarity=0.198 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHHHHHhCccc-CCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCCCCCc
Q 012237 135 VEAANDLTTLLMELFNKNEIL-QKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISP 204 (467)
Q Consensus 135 ~~~a~d~~~fL~~f~~~fp~~-~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg~i~p 204 (467)
..+.+++...++.....+++- ....+.|+|+|-||-.+-..|..|... ...+++.-+..|.|-+..
T Consensus 185 ~sa~~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~dl~~~----~~~~~v~vyTFGsPRVGN 251 (405)
T PLN02310 185 LSASEQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYEAATT----IPDLFVSVISFGAPRVGN 251 (405)
T ss_pred chHHHHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHHHHHh----CcCcceeEEEecCCCccc
Confidence 356667777777777766531 235799999999998776666555431 123345566666666653
No 158
>PLN00413 triacylglycerol lipase
Probab=60.98 E-value=15 Score=38.07 Aligned_cols=38 Identities=24% Similarity=0.423 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHHH
Q 012237 140 DLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAV 180 (467)
Q Consensus 140 d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~ 180 (467)
++...|++.++.+|+ .+++|+|||.||..+-..|..+.
T Consensus 269 ~i~~~Lk~ll~~~p~---~kliVTGHSLGGALAtLaA~~L~ 306 (479)
T PLN00413 269 TILRHLKEIFDQNPT---SKFILSGHSLGGALAILFTAVLI 306 (479)
T ss_pred HHHHHHHHHHHHCCC---CeEEEEecCHHHHHHHHHHHHHH
Confidence 566778888887775 47999999999988887776554
No 159
>PRK14566 triosephosphate isomerase; Provisional
Probab=59.36 E-value=14 Score=35.40 Aligned_cols=62 Identities=13% Similarity=0.265 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCCCCCccc
Q 012237 135 VEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPED 206 (467)
Q Consensus 135 ~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg~i~p~~ 206 (467)
.+-+++++.|+++++...-+.....+=|. |||.--|.-+..|... -++.|+.||..-++|..
T Consensus 188 ~e~a~~v~~~IR~~l~~~~~~~a~~~rIl---YGGSV~~~N~~~l~~~-------~dIDG~LVGgASL~~~~ 249 (260)
T PRK14566 188 PEQAQEVHAFIRKRLSEVSPFIGENIRIL---YGGSVTPSNAADLFAQ-------PDVDGGLIGGASLNSTE 249 (260)
T ss_pred HHHHHHHHHHHHHHHHhcCccccccceEE---ecCCCCHhHHHHHhcC-------CCCCeEEechHhcCHHH
Confidence 34467799999999874421112234444 9999999999888753 27999999999998753
No 160
>KOG3079 consensus Uridylate kinase/adenylate kinase [Nucleotide transport and metabolism]
Probab=58.35 E-value=6.1 Score=35.58 Aligned_cols=14 Identities=43% Similarity=0.976 Sum_probs=12.5
Q ss_pred CCEEEEEcCCCChh
Q 012237 67 WPIILWLQGGPGAS 80 (467)
Q Consensus 67 ~PlilWlnGGPG~S 80 (467)
.|-|||+=|||||-
T Consensus 7 ~~~IifVlGGPGsg 20 (195)
T KOG3079|consen 7 KPPIIFVLGGPGSG 20 (195)
T ss_pred CCCEEEEEcCCCCC
Confidence 48999999999986
No 161
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=57.99 E-value=87 Score=31.26 Aligned_cols=96 Identities=22% Similarity=0.321 Sum_probs=64.8
Q ss_pred CCEEEEEcCCCChhhhhcccccccCCCcc--cCCCCCcchhccccceeecCCCccccccccCCCCcccChHHHHHHHHHH
Q 012237 67 WPIILWLQGGPGASGVGIGNFEEVGPFDT--YLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTL 144 (467)
Q Consensus 67 ~PlilWlnGGPG~SS~~~g~f~E~GP~~~--~l~~n~~sW~~~anvlfiDqPvGtGFSy~~~~~~~~~~~~~~a~d~~~f 144 (467)
+-|||..-|--| |.|+|=... .+...--.|| .| |-+=|. +..++.++..+++-+.+|
T Consensus 243 q~LvIC~EGNAG--------FYEvG~m~tP~~lgYsvLGwN---------hP-GFagST---G~P~p~n~~nA~DaVvQf 301 (517)
T KOG1553|consen 243 QDLVICFEGNAG--------FYEVGVMNTPAQLGYSVLGWN---------HP-GFAGST---GLPYPVNTLNAADAVVQF 301 (517)
T ss_pred ceEEEEecCCcc--------ceEeeeecChHHhCceeeccC---------CC-CccccC---CCCCcccchHHHHHHHHH
Confidence 479999887643 566664331 2333344566 46 555454 335677888888777666
Q ss_pred HHHHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEee
Q 012237 145 LMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVAL 197 (467)
Q Consensus 145 L~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~I 197 (467)
-.+=+ .|+..++.|.|-|-||.-+...|+- .-++|++++
T Consensus 302 AI~~L----gf~~edIilygWSIGGF~~~waAs~----------YPdVkavvL 340 (517)
T KOG1553|consen 302 AIQVL----GFRQEDIILYGWSIGGFPVAWAASN----------YPDVKAVVL 340 (517)
T ss_pred HHHHc----CCCccceEEEEeecCCchHHHHhhc----------CCCceEEEe
Confidence 65544 5777899999999999988877753 237999988
No 162
>PLN02802 triacylglycerol lipase
Probab=57.72 E-value=25 Score=36.80 Aligned_cols=65 Identities=9% Similarity=0.121 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCCCCCc
Q 012237 136 EAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISP 204 (467)
Q Consensus 136 ~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg~i~p 204 (467)
.+.+++.+-++.+.+++|.. ...++|+|+|.||-.+-..|..|.... ...+.+.-+..|.|-+..
T Consensus 309 S~reqVl~eV~~Ll~~Y~~e-~~sI~VTGHSLGGALAtLaA~dL~~~~---~~~~pV~vyTFGsPRVGN 373 (509)
T PLN02802 309 SLSESVVGEVRRLMEKYKGE-ELSITVTGHSLGAALALLVADELATCV---PAAPPVAVFSFGGPRVGN 373 (509)
T ss_pred hHHHHHHHHHHHHHHhCCCC-cceEEEeccchHHHHHHHHHHHHHHhC---CCCCceEEEEcCCCCccc
Confidence 56778888888888877643 247999999999988777777665421 111244556666666653
No 163
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=56.47 E-value=21 Score=33.12 Aligned_cols=48 Identities=15% Similarity=0.040 Sum_probs=34.6
Q ss_pred ChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHHHH
Q 012237 133 NDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVK 181 (467)
Q Consensus 133 ~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~ 181 (467)
+-+..++.+.+.|.+..+..+.- .+++.+.|+|.||.++=.....+.+
T Consensus 54 gI~~~g~rL~~eI~~~~~~~~~~-~~~IsfIgHSLGGli~r~al~~~~~ 101 (217)
T PF05057_consen 54 GIDVCGERLAEEILEHIKDYESK-IRKISFIGHSLGGLIARYALGLLHD 101 (217)
T ss_pred hhHHHHHHHHHHHHHhccccccc-cccceEEEecccHHHHHHHHHHhhh
Confidence 45567888888888887765543 4799999999999887654444433
No 164
>PLN02162 triacylglycerol lipase
Probab=54.86 E-value=27 Score=36.25 Aligned_cols=39 Identities=18% Similarity=0.286 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHHH
Q 012237 139 NDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAV 180 (467)
Q Consensus 139 ~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~ 180 (467)
..+.+.|+.++.++|. .+++++|||-||-.+-..|..+.
T Consensus 262 ~~I~~~L~~lL~k~p~---~kliVTGHSLGGALAtLaAa~L~ 300 (475)
T PLN02162 262 YTIRQMLRDKLARNKN---LKYILTGHSLGGALAALFPAILA 300 (475)
T ss_pred HHHHHHHHHHHHhCCC---ceEEEEecChHHHHHHHHHHHHH
Confidence 3455667777777775 47999999999987776665544
No 165
>COG1647 Esterase/lipase [General function prediction only]
Probab=54.80 E-value=17 Score=33.86 Aligned_cols=61 Identities=18% Similarity=0.342 Sum_probs=45.8
Q ss_pred CceEEEEeccCCcCCCchhHHHHHHHcCcccccccccCCCeeeEeCCCceeeeEEEEEcCEEEEEEcCCcccccCCCC-c
Q 012237 365 GVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFQVPVDQ-P 443 (467)
Q Consensus 365 ~irVLiy~Gd~D~i~n~~g~~~~i~~L~W~g~~~f~~~~~~pw~~~~~~~~~G~~k~~~nltf~~V~~AGHm~vP~dq-P 443 (467)
-.+++|..|..|-++|..+++...+.+.-. +. .+.+..++||- ...|. .
T Consensus 181 ~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~-----------------~K------------eL~~~e~SgHV-It~D~Er 230 (243)
T COG1647 181 YSPTLVVQGRQDEMVPAESANFIYDHVESD-----------------DK------------ELKWLEGSGHV-ITLDKER 230 (243)
T ss_pred ccchhheecccCCCCCHHHHHHHHHhccCC-----------------cc------------eeEEEccCCce-eecchhH
Confidence 479999999999999999999888888621 11 12456799999 88774 4
Q ss_pred HHHHHHHHHHhc
Q 012237 444 CIALNMLAAMTD 455 (467)
Q Consensus 444 ~~a~~mi~~fl~ 455 (467)
+...+-+-+||+
T Consensus 231 d~v~e~V~~FL~ 242 (243)
T COG1647 231 DQVEEDVITFLE 242 (243)
T ss_pred HHHHHHHHHHhh
Confidence 456667777775
No 166
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=54.37 E-value=33 Score=32.41 Aligned_cols=63 Identities=22% Similarity=0.346 Sum_probs=44.6
Q ss_pred cccceeecCCCccccccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHH
Q 012237 107 KADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAA 179 (467)
Q Consensus 107 ~anvlfiDqPvGtGFSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i 179 (467)
..-++=|+-| |-|-=+. ....++.++.|..+...|+. -+..+|+-++|+|+||..+=.+|.++
T Consensus 33 ~iel~avqlP-GR~~r~~---ep~~~di~~Lad~la~el~~------~~~d~P~alfGHSmGa~lAfEvArrl 95 (244)
T COG3208 33 DIELLAVQLP-GRGDRFG---EPLLTDIESLADELANELLP------PLLDAPFALFGHSMGAMLAFEVARRL 95 (244)
T ss_pred hhheeeecCC-CcccccC---CcccccHHHHHHHHHHHhcc------ccCCCCeeecccchhHHHHHHHHHHH
Confidence 4567888888 7664332 23566777888877776653 24578999999999997666666554
No 167
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=53.12 E-value=24 Score=35.27 Aligned_cols=60 Identities=18% Similarity=0.232 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCCCCC
Q 012237 139 NDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWIS 203 (467)
Q Consensus 139 ~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg~i~ 203 (467)
..+.+-++.....+| +..++++|+|-||.++...|..|...... ...+++=+--|-|-+.
T Consensus 155 ~~~~~~~~~L~~~~~---~~~i~vTGHSLGgAlA~laa~~i~~~~~~--~~~~v~v~tFG~PRvG 214 (336)
T KOG4569|consen 155 SGLDAELRRLIELYP---NYSIWVTGHSLGGALASLAALDLVKNGLK--TSSPVKVYTFGQPRVG 214 (336)
T ss_pred HHHHHHHHHHHHhcC---CcEEEEecCChHHHHHHHHHHHHHHcCCC--CCCceEEEEecCCCcc
Confidence 334455555566666 56899999999999999999988763211 2345566666666654
No 168
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=52.66 E-value=30 Score=34.22 Aligned_cols=105 Identities=19% Similarity=0.254 Sum_probs=56.2
Q ss_pred CCEEEEEcCCCChhhhhc-----ccccccCCCcccCCCCCcchhccccceeecCCCccccccccCCCCcccChHHHHHHH
Q 012237 67 WPIILWLQGGPGASGVGI-----GNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDL 141 (467)
Q Consensus 67 ~PlilWlnGGPG~SS~~~-----g~f~E~GP~~~~l~~n~~sW~~~anvlfiDqPvGtGFSy~~~~~~~~~~~~~~a~d~ 141 (467)
.|++|-++|=-|.|..-+ ..+.+-| | .++-++-- |.|-+-.....-+...+. +|+
T Consensus 75 ~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg------------~----~~Vv~~~R-gcs~~~n~~p~~yh~G~t---~D~ 134 (345)
T COG0429 75 KPLVVLFHGLEGSSNSPYARGLMRALSRRG------------W----LVVVFHFR-GCSGEANTSPRLYHSGET---EDI 134 (345)
T ss_pred CceEEEEeccCCCCcCHHHHHHHHHHHhcC------------C----eEEEEecc-cccCCcccCcceecccch---hHH
Confidence 499999999666654311 1112222 2 23334433 555443322222222222 566
Q ss_pred HHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCC
Q 012237 142 TTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDS 200 (467)
Q Consensus 142 ~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg 200 (467)
..||...-..+| .++||.+|-|.||. ++|..+.++ ..+.+ ...++++-+|
T Consensus 135 ~~~l~~l~~~~~---~r~~~avG~SLGgn---mLa~ylgee--g~d~~-~~aa~~vs~P 184 (345)
T COG0429 135 RFFLDWLKARFP---PRPLYAVGFSLGGN---MLANYLGEE--GDDLP-LDAAVAVSAP 184 (345)
T ss_pred HHHHHHHHHhCC---CCceEEEEecccHH---HHHHHHHhh--ccCcc-cceeeeeeCH
Confidence 666665555566 48999999999996 455555542 12222 3556666444
No 169
>PF05436 MF_alpha_N: Mating factor alpha precursor N-terminus; InterPro: IPR008675 This entry contains the N-terminal regions of the Saccharomyces mating factor alpha precursor protein. All proteins in this family contain one or more copies of IPR006742 from INTERPRO further toward their C terminus.; GO: 0007618 mating, 0005576 extracellular region
Probab=51.88 E-value=21 Score=27.82 Aligned_cols=45 Identities=11% Similarity=0.201 Sum_probs=23.2
Q ss_pred chhHHHHHHHHHHhhhhcCcccccccCCCCCCCcee--eeeEeCCCc
Q 012237 3 KLCGFVATLLFLVSLLFNGGAAARALNKNQDASEEW--GYVEVRPKA 47 (467)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s--Gyv~v~~~~ 47 (467)
||..+++..+++...+.+.......-......++++ ||+|.++..
T Consensus 2 Kf~siLsa~ala~~s~~a~~~~~~~~~~~~~iP~EAiiGyLDl~~d~ 48 (86)
T PF05436_consen 2 KFSSILSAAALASSSVAAAPVQTTTDDESANIPAEAIIGYLDLGGDN 48 (86)
T ss_pred chHHHHHHHHHHHHHhhcCCcccccccccccCCHHHHhceeccCCCC
Confidence 455555555544444333322222223333566666 999997653
No 170
>PLN03037 lipase class 3 family protein; Provisional
Probab=48.91 E-value=42 Score=35.38 Aligned_cols=46 Identities=22% Similarity=0.218 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHHHhCccc-CCCCEEEEecccCcchHHHHHHHHHH
Q 012237 136 EAANDLTTLLMELFNKNEIL-QKSPLFIVAESYGGKFAATLGLAAVK 181 (467)
Q Consensus 136 ~~a~d~~~fL~~f~~~fp~~-~~~~~yi~GESYgG~yvP~lA~~i~~ 181 (467)
.+.+++..-++...+.+++. ....++|+|+|.||-.+-..|..|..
T Consensus 295 SareQVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~DIa~ 341 (525)
T PLN03037 295 SASEQVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYEAAR 341 (525)
T ss_pred hhHHHHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHHHHH
Confidence 45566777777777777642 24579999999999877766666554
No 171
>PLN02429 triosephosphate isomerase
Probab=48.84 E-value=26 Score=34.47 Aligned_cols=61 Identities=16% Similarity=0.229 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHHHHh-CcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCCCCCccc
Q 012237 136 EAANDLTTLLMELFNK-NEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPED 206 (467)
Q Consensus 136 ~~a~d~~~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg~i~p~~ 206 (467)
+-++.+..++++|+.. +.+-....+-|. |||---|.-+.++... .++.|+.||.+.+++..
T Consensus 239 e~~~~v~~~IR~~l~~~~~~~va~~irIL---YGGSV~~~N~~el~~~-------~diDG~LVGgASL~~~~ 300 (315)
T PLN02429 239 QQAQEVHVAVRGWLKKNVSEEVASKTRII---YGGSVNGGNSAELAKE-------EDIDGFLVGGASLKGPE 300 (315)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhccCceEE---EcCccCHHHHHHHhcC-------CCCCEEEeecceecHHH
Confidence 4466688999998864 332222344554 9999999888777642 37999999999998743
No 172
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=48.13 E-value=21 Score=32.49 Aligned_cols=54 Identities=20% Similarity=0.273 Sum_probs=32.9
Q ss_pred ccccccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHH
Q 012237 118 GTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLA 178 (467)
Q Consensus 118 GtGFSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~ 178 (467)
|||-|.++-++.. .+.+-|....++|+ .+||+- ..++|+|-|+|+..+-.+|.+
T Consensus 70 gVG~S~G~fD~Gi--GE~~Da~aaldW~~---~~hp~s--~~~~l~GfSFGa~Ia~~la~r 123 (210)
T COG2945 70 GVGRSQGEFDNGI--GELEDAAAALDWLQ---ARHPDS--ASCWLAGFSFGAYIAMQLAMR 123 (210)
T ss_pred ccccccCcccCCc--chHHHHHHHHHHHH---hhCCCc--hhhhhcccchHHHHHHHHHHh
Confidence 9999988744332 23222332333333 468874 347999999999655555554
No 173
>PRK07868 acyl-CoA synthetase; Validated
Probab=47.37 E-value=31 Score=39.92 Aligned_cols=62 Identities=18% Similarity=0.149 Sum_probs=46.8
Q ss_pred CceEEEEeccCCcCCCchhHHHHHHHcCcccccccccCCCeeeEeCCCceeeeEEEEEcCEEE-EEEcCCcccc--cCCC
Q 012237 365 GVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHF-YWILGAGHFQ--VPVD 441 (467)
Q Consensus 365 ~irVLiy~Gd~D~i~n~~g~~~~i~~L~W~g~~~f~~~~~~pw~~~~~~~~~G~~k~~~nltf-~~V~~AGHm~--vP~d 441 (467)
..++|++.|..|.++|....+.+.+.+. +..+ ..+.++|||. |-.-
T Consensus 297 ~~P~L~i~G~~D~ivp~~~~~~l~~~i~-------------------------------~a~~~~~~~~~GH~g~~~g~~ 345 (994)
T PRK07868 297 TCPVLAFVGEVDDIGQPASVRGIRRAAP-------------------------------NAEVYESLIRAGHFGLVVGSR 345 (994)
T ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHhCC-------------------------------CCeEEEEeCCCCCEeeeechh
Confidence 5899999999999999998888877665 1122 3467899982 3345
Q ss_pred CcHHHHHHHHHHhcCC
Q 012237 442 QPCIALNMLAAMTDSP 457 (467)
Q Consensus 442 qP~~a~~mi~~fl~~~ 457 (467)
-|+.....+.+||+..
T Consensus 346 a~~~~wp~i~~wl~~~ 361 (994)
T PRK07868 346 AAQQTWPTVADWVKWL 361 (994)
T ss_pred hhhhhChHHHHHHHHh
Confidence 6777788899999853
No 174
>PLN02847 triacylglycerol lipase
Probab=45.25 E-value=29 Score=37.09 Aligned_cols=62 Identities=21% Similarity=0.156 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecC-CCCCcc
Q 012237 137 AANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGD-SWISPE 205 (467)
Q Consensus 137 ~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGN-g~i~p~ 205 (467)
+.+.+...|++-+..||+| ++.|+|||.||-.+..++..+ ... ...-+++.+..|- |++++.
T Consensus 233 I~~~i~~~L~kal~~~PdY---kLVITGHSLGGGVAALLAilL-Re~---~~fssi~CyAFgPp~cvS~e 295 (633)
T PLN02847 233 IAKLSTPCLLKALDEYPDF---KIKIVGHSLGGGTAALLTYIL-REQ---KEFSSTTCVTFAPAACMTWD 295 (633)
T ss_pred HHHHHHHHHHHHHHHCCCC---eEEEeccChHHHHHHHHHHHH-hcC---CCCCCceEEEecCchhcCHH
Confidence 3444444556666678876 799999999998777776544 321 1123566777764 445543
No 175
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=44.88 E-value=17 Score=33.62 Aligned_cols=54 Identities=28% Similarity=0.343 Sum_probs=29.8
Q ss_pred CceEEEEeccCCcCCCchh-HHHHHHHcCcccccccccCCCeeeEeCCCceeeeEEEEEcCEEEEEEcCCcccccCCCCc
Q 012237 365 GVNVTVYNGQLDVICSTKG-TEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFQVPVDQP 443 (467)
Q Consensus 365 ~irVLiy~Gd~D~i~n~~g-~~~~i~~L~W~g~~~f~~~~~~pw~~~~~~~~~G~~k~~~nltf~~V~~AGHm~vP~dqP 443 (467)
+-+||+.+|..|.+-|..- .+..++.|+=.+. - .+++.+...+|||+.-|-+.|
T Consensus 115 ~~piLli~g~dD~~WpS~~~a~~i~~rL~~~~~----------------------~---~~~~~l~Y~~aGH~i~~Py~P 169 (213)
T PF08840_consen 115 KGPILLISGEDDQIWPSSEMAEQIEERLKAAGF----------------------P---HNVEHLSYPGAGHLIEPPYFP 169 (213)
T ss_dssp -SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT------------------------------EEEEETTB-S---STT--
T ss_pred CCCEEEEEeCCCCccchHHHHHHHHHHHHHhCC----------------------C---CcceEEEcCCCCceecCCCCC
Confidence 5799999999999998664 4556677762111 0 157778889999994233344
No 176
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=44.44 E-value=37 Score=30.25 Aligned_cols=27 Identities=11% Similarity=0.081 Sum_probs=22.9
Q ss_pred ceEEEEeccCCcCCCchhHHHHHHHcC
Q 012237 366 VNVTVYNGQLDVICSTKGTEAWIEKLK 392 (467)
Q Consensus 366 irVLiy~Gd~D~i~n~~g~~~~i~~L~ 392 (467)
++.+++.++.|..||+.-++++.+.++
T Consensus 115 ~~~~viaS~nDp~vp~~~a~~~A~~l~ 141 (171)
T PF06821_consen 115 FPSIVIASDNDPYVPFERAQRLAQRLG 141 (171)
T ss_dssp CCEEEEEETTBSSS-HHHHHHHHHHHT
T ss_pred CCeEEEEcCCCCccCHHHHHHHHHHcC
Confidence 455899999999999999999998886
No 177
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=44.16 E-value=41 Score=31.67 Aligned_cols=67 Identities=27% Similarity=0.254 Sum_probs=41.4
Q ss_pred ccccceeecCCCccccccccCCCCcccC-hHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHH
Q 012237 106 KKADLLFVDNPVGTGYSYVEDNSSFVKN-DVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLG 176 (467)
Q Consensus 106 ~~anvlfiDqPvGtGFSy~~~~~~~~~~-~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA 176 (467)
.-..||-.|-- |.|-|.....+..... .+=+-.||-..|..-=+.-| ..|.|..|+||||+-+=.++
T Consensus 56 ~Gf~Vlt~dyR-G~g~S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~~~---~~P~y~vgHS~GGqa~gL~~ 123 (281)
T COG4757 56 AGFEVLTFDYR-GIGQSRPASLSGSQWRYLDWARLDFPAALAALKKALP---GHPLYFVGHSFGGQALGLLG 123 (281)
T ss_pred cCceEEEEecc-cccCCCccccccCccchhhhhhcchHHHHHHHHhhCC---CCceEEeeccccceeecccc
Confidence 34578888877 9998875533222222 23344555555544333334 58999999999998655444
No 178
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=44.01 E-value=32 Score=30.95 Aligned_cols=61 Identities=16% Similarity=0.109 Sum_probs=38.7
Q ss_pred ccccceeecCCCc--cccccccCCCCcccChHHHHHHHHHHHHHHHHhC-cccCCCCEEEEecccCcchHHH
Q 012237 106 KKADLLFVDNPVG--TGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKN-EILQKSPLFIVAESYGGKFAAT 174 (467)
Q Consensus 106 ~~anvlfiDqPvG--tGFSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~f-p~~~~~~~yi~GESYgG~yvP~ 174 (467)
+.|-|.|++-... ...+-.. ..--+..|.+|..|++.+=..+ | ...+-+.|+|||..-+-.
T Consensus 62 ~vAvV~WlgYdaP~~~~~~a~~-----~~~A~~ga~~L~~f~~gl~a~~~~---~~~~tv~GHSYGS~v~G~ 125 (177)
T PF06259_consen 62 SVAVVAWLGYDAPAGGLPDAAS-----PGYARAGAPRLARFLDGLRATHGP---DAHLTVVGHSYGSTVVGL 125 (177)
T ss_pred CeEEEEEcCCCCCCCccccccC-----chHHHHHHHHHHHHHHHhhhhcCC---CCCEEEEEecchhHHHHH
Confidence 6777888755444 2222111 1223567778888888776555 3 357999999999965544
No 179
>PLN02442 S-formylglutathione hydrolase
Probab=43.95 E-value=42 Score=32.43 Aligned_cols=49 Identities=16% Similarity=0.124 Sum_probs=36.3
Q ss_pred hcCceEEEEeccCCcCCCch-hHHHHHHHcCcccccccccCCCeeeEeCCCceeeeEEEEEcCEEEEEEcCCcccccC
Q 012237 363 AKGVNVTVYNGQLDVICSTK-GTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFQVP 439 (467)
Q Consensus 363 ~~~irVLiy~Gd~D~i~n~~-g~~~~i~~L~W~g~~~f~~~~~~pw~~~~~~~~~G~~k~~~nltf~~V~~AGHm~vP 439 (467)
..+.+||+.+|+.|.+|+.. .++.+.+.++= .| .+.++.+..|++|- ..
T Consensus 215 ~~~~pvli~~G~~D~~v~~~~~s~~~~~~l~~----------------------~g-----~~~~~~~~pg~~H~-~~ 264 (283)
T PLN02442 215 DVSATILIDQGEADKFLKEQLLPENFEEACKE----------------------AG-----APVTLRLQPGYDHS-YF 264 (283)
T ss_pred ccCCCEEEEECCCCccccccccHHHHHHHHHH----------------------cC-----CCeEEEEeCCCCcc-HH
Confidence 34689999999999999874 46666666650 01 14678889999999 66
No 180
>PLN02561 triosephosphate isomerase
Probab=43.67 E-value=33 Score=32.76 Aligned_cols=59 Identities=17% Similarity=0.253 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHHHHh-CcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCCCCCc
Q 012237 136 EAANDLTTLLMELFNK-NEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISP 204 (467)
Q Consensus 136 ~~a~d~~~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg~i~p 204 (467)
+-++++..++++++.+ |..-....+-|. |||.--|.-+.++... .++.|+.||.+-+++
T Consensus 180 ~~~~~v~~~Ir~~l~~~~~~~~a~~i~IL---YGGSV~~~N~~~l~~~-------~~iDG~LVG~ASL~~ 239 (253)
T PLN02561 180 AQAQEVHDELRKWLHKNVSPEVAATTRII---YGGSVTGANCKELAAQ-------PDVDGFLVGGASLKP 239 (253)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccceEE---EeCCcCHHHHHHHhcC-------CCCCeEEEehHhhHH
Confidence 4456688889988753 433223445555 9999999988877642 379999999999986
No 181
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=41.72 E-value=56 Score=30.57 Aligned_cols=35 Identities=26% Similarity=0.344 Sum_probs=29.5
Q ss_pred HHHHHhcCceEEEEeccCCcCCCchhHHHHHHHcC
Q 012237 358 VDELLAKGVNVTVYNGQLDVICSTKGTEAWIEKLK 392 (467)
Q Consensus 358 l~~LL~~~irVLiy~Gd~D~i~n~~g~~~~i~~L~ 392 (467)
++.+-+-..+||+..|+.|-+||.....+|-+.++
T Consensus 157 ~~D~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk 191 (242)
T KOG3043|consen 157 SADIANVKAPILFLFAELDEDVPPKDVKAWEEKLK 191 (242)
T ss_pred hhHHhcCCCCEEEEeecccccCCHHHHHHHHHHHh
Confidence 34444446899999999999999999999998887
No 182
>KOG3411 consensus 40S ribosomal protein S19 [Translation, ribosomal structure and biogenesis]
Probab=40.69 E-value=15 Score=30.86 Aligned_cols=81 Identities=22% Similarity=0.381 Sum_probs=52.4
Q ss_pred ccccccCCCcccCCCCCcchhccccc---eeecCCCcccccc---cc------CCCCcccChHHHHHHHHHHHHH--HHH
Q 012237 85 GNFEEVGPFDTYLKPRNSTWLKKADL---LFVDNPVGTGYSY---VE------DNSSFVKNDVEAANDLTTLLME--LFN 150 (467)
Q Consensus 85 g~f~E~GP~~~~l~~n~~sW~~~anv---lfiDqPvGtGFSy---~~------~~~~~~~~~~~~a~d~~~fL~~--f~~ 150 (467)
|-+-|.-|+. -+|-.+..|.+ ||+-.|+|+|+=. +. -++-+..+...+++..++.|+. |.+
T Consensus 40 g~~kElAP~D-----~dWfytRaASiaRhiylR~~~gvg~~~KiYGg~krrGvrPsh~~~as~~i~rkvlQ~Le~~~~ve 114 (143)
T KOG3411|consen 40 GKGKELAPYD-----PDWYYTRAASIARHIYLRGPVGVGALTKIYGGSKRRGVRPSHFCDASGGIARKVLQALEKMGIVE 114 (143)
T ss_pred ccCcccCCCC-----ccHHHHHHHHHHHHHHhccccchhHHHHHhcccccCCCCChhhhccccHHHHHHHHHHHhCCcee
Confidence 4555666644 23555666666 8999999999632 11 1234566778899988888876 677
Q ss_pred hCcccCCCCEEEEecccCcchHHHHHHHHHHHH
Q 012237 151 KNEILQKSPLFIVAESYGGKFAATLGLAAVKAI 183 (467)
Q Consensus 151 ~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~ 183 (467)
+||+ ||+.+..-.++.++++
T Consensus 115 ~hp~-------------gGR~lt~~GqrdldrI 134 (143)
T KOG3411|consen 115 KHPK-------------GGRRLTEQGQRDLDRI 134 (143)
T ss_pred eCCC-------------CcceeCcccchhHHHH
Confidence 7886 5555555555555543
No 183
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=38.46 E-value=1.7e+02 Score=28.78 Aligned_cols=71 Identities=10% Similarity=0.055 Sum_probs=38.6
Q ss_pred cChHHHHHHHHHHHHHHHHhCcc-cCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCCCCCccc
Q 012237 132 KNDVEAANDLTTLLMELFNKNEI-LQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPED 206 (467)
Q Consensus 132 ~~~~~~a~d~~~fL~~f~~~fp~-~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg~i~p~~ 206 (467)
.+.++-++|+-..++.+-..... +...++.|+|+|=|..=+-.+..+ .+. ....-.++|+|+-.|.-|...
T Consensus 81 ~SL~~D~~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~---~~~-~~~~~~VdG~ILQApVSDREa 152 (303)
T PF08538_consen 81 SSLDRDVEEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSS---PNP-SPSRPPVDGAILQAPVSDREA 152 (303)
T ss_dssp --HHHHHHHHHHHHHHHHHHS------S-EEEEEECCHHHHHHHHHHH----TT----CCCEEEEEEEEE---TTS
T ss_pred chhhhHHHHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhc---cCc-cccccceEEEEEeCCCCChhH
Confidence 35666677777777655554322 346789999999998655544332 211 011347999999888777643
No 184
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=38.43 E-value=71 Score=30.01 Aligned_cols=61 Identities=23% Similarity=0.348 Sum_probs=44.2
Q ss_pred ceEEEEeccCCcCCCchhHHHHHHHcCcccccccccCCCeeeEeCCCceeeeEEEEEcCEEEEEEcCCcccccCCCCcH-
Q 012237 366 VNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFQVPVDQPC- 444 (467)
Q Consensus 366 irVLiy~Gd~D~i~n~~g~~~~i~~L~W~g~~~f~~~~~~pw~~~~~~~~~G~~k~~~nltf~~V~~AGHm~vP~dqP~- 444 (467)
.++|+.+|..|.++|....+.......= ......++.+++|. .+.+.+.
T Consensus 233 ~P~l~~~G~~D~~vp~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~H~-~~~~~~~~ 282 (299)
T COG1073 233 RPVLLVHGERDEVVPLRDAEDLYEAARE-----------------------------RPKKLLFVPGGGHI-DLYDNPPA 282 (299)
T ss_pred cceEEEecCCCcccchhhhHHHHhhhcc-----------------------------CCceEEEecCCccc-cccCccHH
Confidence 7999999999999997777666655540 02445678888999 8876665
Q ss_pred --HHHHHHHHHhcC
Q 012237 445 --IALNMLAAMTDS 456 (467)
Q Consensus 445 --~a~~mi~~fl~~ 456 (467)
.++.-+.+|+..
T Consensus 283 ~~~~~~~~~~f~~~ 296 (299)
T COG1073 283 VEQALDKLAEFLER 296 (299)
T ss_pred HHHHHHHHHHHHHH
Confidence 566666666654
No 185
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=38.27 E-value=1.1e+02 Score=28.48 Aligned_cols=64 Identities=14% Similarity=0.121 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHHHHhC--cccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEe-ecCCCCCc
Q 012237 135 VEAANDLTTLLMELFNKN--EILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVA-LGDSWISP 204 (467)
Q Consensus 135 ~~~a~d~~~fL~~f~~~f--p~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~-IGNg~i~p 204 (467)
.+.++.+.+.++...+.+ ..-..+++.|.|+|.||. +|+.++.... ...-++++|+ +|.|...|
T Consensus 60 ~~q~~~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGl----var~~l~~~~--~~~~~v~~iitl~tPh~g~ 126 (225)
T PF07819_consen 60 QRQAEFLAEAIKYILELYKSNRPPPRSVILVGHSMGGL----VARSALSLPN--YDPDSVKTIITLGTPHRGS 126 (225)
T ss_pred HHHHHHHHHHHHHHHHhhhhccCCCCceEEEEEchhhH----HHHHHHhccc--cccccEEEEEEEcCCCCCc
Confidence 344555666666665544 122468999999999994 3433332111 1112456554 55565544
No 186
>cd00311 TIM Triosephosphate isomerase (TIM) is a glycolytic enzyme that catalyzes the interconversion of dihydroxyacetone phosphate and D-glyceraldehyde-3-phosphate. The reaction is very efficient and requires neither cofactors nor metal ions. TIM, usually homodimeric, but in some organisms tetrameric, is ubiqitous and conserved in function across eukaryotes, bacteria and archaea.
Probab=36.81 E-value=58 Score=30.88 Aligned_cols=60 Identities=18% Similarity=0.338 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHHHHh-CcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCCCCCccc
Q 012237 136 EAANDLTTLLMELFNK-NEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPED 206 (467)
Q Consensus 136 ~~a~d~~~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg~i~p~~ 206 (467)
+-+.+.+.++++++.. +.+ ....+-|. |||---|.=+..+.+. -++.|+.+|.+.+++..
T Consensus 176 ~~~~ev~~~ir~~l~~~~~~-~~~~~~Il---YGGSV~~~N~~~l~~~-------~~vDG~LVG~Asl~~~~ 236 (242)
T cd00311 176 EQAQEVHAFIRKLLAELYGE-VAEKVRIL---YGGSVNPENAAELLAQ-------PDIDGVLVGGASLKAES 236 (242)
T ss_pred HHHHHHHHHHHHHHHHhccc-ccCceeEE---ECCCCCHHHHHHHhcC-------CCCCEEEeehHhhCHHH
Confidence 4456688999998864 433 33445555 9999999877777652 16999999999998643
No 187
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=36.33 E-value=68 Score=28.74 Aligned_cols=81 Identities=15% Similarity=0.164 Sum_probs=50.5
Q ss_pred cceeecCCCccccccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHH--HHHHHHcC
Q 012237 109 DLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLA--AVKAIEAG 186 (467)
Q Consensus 109 nvlfiDqPvGtGFSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~--i~~~~~~~ 186 (467)
++--|+-|+..+.. .+..+..+.+.++...++++..+-|+ .+|.|+|-|=|+.-+-..... +...
T Consensus 41 ~~~~V~YpA~~~~~------~y~~S~~~G~~~~~~~i~~~~~~CP~---~kivl~GYSQGA~V~~~~~~~~~l~~~---- 107 (179)
T PF01083_consen 41 AVQGVEYPASLGPN------SYGDSVAAGVANLVRLIEEYAARCPN---TKIVLAGYSQGAMVVGDALSGDGLPPD---- 107 (179)
T ss_dssp EEEE--S---SCGG------SCHHHHHHHHHHHHHHHHHHHHHSTT---SEEEEEEETHHHHHHHHHHHHTTSSHH----
T ss_pred EEEecCCCCCCCcc------cccccHHHHHHHHHHHHHHHHHhCCC---CCEEEEecccccHHHHHHHHhccCChh----
Confidence 34446677766652 23456778888899999999998885 699999999999766555444 1111
Q ss_pred cceeeeee-EeecCCCCC
Q 012237 187 KLKLKLGG-VALGDSWIS 203 (467)
Q Consensus 187 ~~~inLkG-i~IGNg~i~ 203 (467)
..-++.+ +.+|||.-.
T Consensus 108 -~~~~I~avvlfGdP~~~ 124 (179)
T PF01083_consen 108 -VADRIAAVVLFGDPRRG 124 (179)
T ss_dssp -HHHHEEEEEEES-TTTB
T ss_pred -hhhhEEEEEEecCCccc
Confidence 1125666 477888764
No 188
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=36.03 E-value=1.2e+02 Score=30.04 Aligned_cols=55 Identities=11% Similarity=0.128 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCCCC
Q 012237 137 AANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWI 202 (467)
Q Consensus 137 ~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg~i 202 (467)
+..|.+.++. |+...|+.-.+.+.++|+|-||...-.+|.. .. .++.++...|++
T Consensus 155 ~~~D~~ravd-~l~slpevD~~rI~v~G~SqGG~lal~~aaL-----d~-----rv~~~~~~vP~l 209 (320)
T PF05448_consen 155 VYLDAVRAVD-FLRSLPEVDGKRIGVTGGSQGGGLALAAAAL-----DP-----RVKAAAADVPFL 209 (320)
T ss_dssp HHHHHHHHHH-HHHTSTTEEEEEEEEEEETHHHHHHHHHHHH-----SS-----T-SEEEEESESS
T ss_pred HHHHHHHHHH-HHHhCCCcCcceEEEEeecCchHHHHHHHHh-----Cc-----cccEEEecCCCc
Confidence 3455555553 6778899988999999999999766655532 11 477777755554
No 189
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=35.86 E-value=30 Score=29.20 Aligned_cols=16 Identities=25% Similarity=0.463 Sum_probs=12.9
Q ss_pred CCCEEEEEcCCCChhh
Q 012237 66 PWPIILWLQGGPGASG 81 (467)
Q Consensus 66 ~~PlilWlnGGPG~SS 81 (467)
++||||=|+|.||+.=
T Consensus 51 ~KpLVlSfHG~tGtGK 66 (127)
T PF06309_consen 51 RKPLVLSFHGWTGTGK 66 (127)
T ss_pred CCCEEEEeecCCCCcH
Confidence 3599999999888753
No 190
>PRK00042 tpiA triosephosphate isomerase; Provisional
Probab=35.04 E-value=66 Score=30.67 Aligned_cols=60 Identities=17% Similarity=0.323 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHHHHh-CcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCCCCCccc
Q 012237 136 EAANDLTTLLMELFNK-NEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPED 206 (467)
Q Consensus 136 ~~a~d~~~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg~i~p~~ 206 (467)
+-+++++.|+++++.. +. -....+-|. |||---|.-+.++... .++.|+.+|.+.+++..
T Consensus 180 ~~~~~v~~~Ir~~l~~~~~-~~~~~~~Il---YGGSV~~~N~~~l~~~-------~~vDG~LVG~Asl~~~~ 240 (250)
T PRK00042 180 EQAQEVHAFIRAVLAELYG-EVAEKVRIL---YGGSVKPDNAAELMAQ-------PDIDGALVGGASLKAED 240 (250)
T ss_pred HHHHHHHHHHHHHHHHhcc-cccCCceEE---EcCCCCHHHHHHHhcC-------CCCCEEEEeeeeechHH
Confidence 4566788999998863 32 123344444 9999999888777642 37999999999998754
No 191
>PF09292 Neil1-DNA_bind: Endonuclease VIII-like 1, DNA bind; InterPro: IPR015371 This domain is predominantly found in Endonuclease VIII-like 1 proteins and adopts a glucocorticoid receptor-like fold. Structural analysis reveals a zincless finger motif that is required for glycosylase activity []. ; PDB: 1TDH_A.
Probab=34.57 E-value=24 Score=22.72 Aligned_cols=11 Identities=45% Similarity=1.150 Sum_probs=6.0
Q ss_pred CEEEEEcCCCC
Q 012237 68 PIILWLQGGPG 78 (467)
Q Consensus 68 PlilWlnGGPG 78 (467)
--+||++|-||
T Consensus 25 gRTiWFqGdPG 35 (39)
T PF09292_consen 25 GRTIWFQGDPG 35 (39)
T ss_dssp S-EEEESS---
T ss_pred CCEEEeeCCCC
Confidence 45799999887
No 192
>PF07389 DUF1500: Protein of unknown function (DUF1500); InterPro: IPR009974 This family consists of several Orthopoxvirus specific proteins, which include Vaccinia virus, B6 protein, they are around 100 residues in length. The function of this family is unknown.
Probab=34.44 E-value=32 Score=26.72 Aligned_cols=28 Identities=7% Similarity=0.150 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHhCcccCCCCEEEEecccC
Q 012237 139 NDLTTLLMELFNKNEILQKSPLFIVAESYG 168 (467)
Q Consensus 139 ~d~~~fL~~f~~~fp~~~~~~~yi~GESYg 168 (467)
-|+|++.+.|+-+| |-.+.|.+.|+||+
T Consensus 7 vdIYDAvRaflLr~--Y~~KrfIV~g~S~~ 34 (100)
T PF07389_consen 7 VDIYDAVRAFLLRH--YYDKRFIVYGRSNA 34 (100)
T ss_pred hhHHHHHHHHHHHH--HccceEEEecchHH
Confidence 46888888888765 44788999999985
No 193
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=34.25 E-value=29 Score=30.71 Aligned_cols=26 Identities=31% Similarity=0.436 Sum_probs=21.4
Q ss_pred ccCCCCEEEEecccCcchHHHHHHHH
Q 012237 154 ILQKSPLFIVAESYGGKFAATLGLAA 179 (467)
Q Consensus 154 ~~~~~~~yi~GESYgG~yvP~lA~~i 179 (467)
....-|+.|.|.||||+...++|.++
T Consensus 85 ~l~~gpLi~GGkSmGGR~aSmvade~ 110 (213)
T COG3571 85 GLAEGPLIIGGKSMGGRVASMVADEL 110 (213)
T ss_pred cccCCceeeccccccchHHHHHHHhh
Confidence 44456999999999999888888664
No 194
>PRK10259 hypothetical protein; Provisional
Probab=34.09 E-value=41 Score=26.34 Aligned_cols=44 Identities=16% Similarity=0.067 Sum_probs=28.6
Q ss_pred CcchhHHHHHHHHHHhhhhcCcccccccCCCCCCCceeeeeEeCC
Q 012237 1 MEKLCGFVATLLFLVSLLFNGGAAARALNKNQDASEEWGYVEVRP 45 (467)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sGyv~v~~ 45 (467)
|++.+-+++.|++....... .+|+.+.......-+.-|.|.|..
T Consensus 1 Mk~ik~~~aa~~ls~~Sf~a-~AA~~i~~~q~~~l~kiG~VSvsg 44 (86)
T PRK10259 1 MKTINTVVAAMALSTLSFGV-FAAEPVTASQAQNMNKIGVVSADG 44 (86)
T ss_pred CchHHHHHHHHHHHHhhhhh-cchhhhChHHhcCCCcceEEEEec
Confidence 78888777777766664333 344555544455667779999863
No 195
>PTZ00333 triosephosphate isomerase; Provisional
Probab=33.31 E-value=59 Score=31.12 Aligned_cols=61 Identities=16% Similarity=0.284 Sum_probs=43.5
Q ss_pred hHHHHHHHHHHHHHHHHh-CcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCCCCCc
Q 012237 134 DVEAANDLTTLLMELFNK-NEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISP 204 (467)
Q Consensus 134 ~~~~a~d~~~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg~i~p 204 (467)
+.+.+++++.++++++.. +.......+-|. |||.--|.-+..+... .++.|+.||.+.+++
T Consensus 181 ~~e~i~~~~~~IR~~l~~~~~~~~~~~~~IL---YGGSV~~~N~~~l~~~-------~~vDG~LvG~asl~~ 242 (255)
T PTZ00333 181 TPEQAQEVHAFIRKWLAEKVGADVAEATRII---YGGSVNEKNCKELIKQ-------PDIDGFLVGGASLKP 242 (255)
T ss_pred CHHHHHHHHHHHHHHHHHhhcccccccceEE---EcCCCCHHHHHHHhcC-------CCCCEEEEehHhhhh
Confidence 345677788999998863 332223344454 9999999988877642 279999999988874
No 196
>PRK14565 triosephosphate isomerase; Provisional
Probab=32.74 E-value=59 Score=30.71 Aligned_cols=55 Identities=18% Similarity=0.230 Sum_probs=40.2
Q ss_pred hHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCCCCCccc
Q 012237 134 DVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPED 206 (467)
Q Consensus 134 ~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg~i~p~~ 206 (467)
+.+.+++.+.+++++. ..+-|. |||.--|.-+..+.+. -++.|+.||.+.+++..
T Consensus 172 ~~e~i~~~~~~Ir~~~--------~~~~Il---YGGSV~~~N~~~l~~~-------~~iDG~LvG~asl~~~~ 226 (237)
T PRK14565 172 SNDAIAEAFEIIRSYD--------SKSHII---YGGSVNQENIRDLKSI-------NQLSGVLVGSASLDVDS 226 (237)
T ss_pred CHHHHHHHHHHHHHhC--------CCceEE---EcCccCHhhHHHHhcC-------CCCCEEEEechhhcHHH
Confidence 3355677888888762 233333 9999999988887652 27999999999998754
No 197
>PF14020 DUF4236: Protein of unknown function (DUF4236)
Probab=32.65 E-value=21 Score=25.34 Aligned_cols=14 Identities=50% Similarity=0.627 Sum_probs=11.1
Q ss_pred ceeecCCCccccccc
Q 012237 110 LLFVDNPVGTGYSYV 124 (467)
Q Consensus 110 vlfiDqPvGtGFSy~ 124 (467)
-+-++-| |+|+||.
T Consensus 41 ~~t~~iP-GtGlsyr 54 (55)
T PF14020_consen 41 RTTVGIP-GTGLSYR 54 (55)
T ss_pred EEEEEcC-CCccEEe
Confidence 4667888 9999984
No 198
>PF08060 NOSIC: NOSIC (NUC001) domain; InterPro: IPR012976 This is the central domain in Nop56/SIK1-like proteins [].; PDB: 3PLA_K 3ICX_B 3ID6_A 3ID5_E 3NVM_A 3NMU_B 2NNW_C 3NVI_A 3NVK_A 2OZB_E ....
Probab=32.14 E-value=46 Score=23.34 Aligned_cols=23 Identities=22% Similarity=0.083 Sum_probs=17.9
Q ss_pred hHHHHHHHHHHHHHHHH-hCcccC
Q 012237 134 DVEAANDLTTLLMELFN-KNEILQ 156 (467)
Q Consensus 134 ~~~~a~d~~~fL~~f~~-~fp~~~ 156 (467)
.+.....++.+++.||+ +|||+.
T Consensus 12 id~ei~~~~~~lre~Y~~~FPEL~ 35 (53)
T PF08060_consen 12 IDKEINLLHMRLREWYSWHFPELE 35 (53)
T ss_dssp HHHHHHHHHHHHHHHHTTTSTTHH
T ss_pred HHHHHHHHHHHHHHHHHccchhHH
Confidence 34455668999999997 699974
No 199
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=31.89 E-value=1.9e+02 Score=26.25 Aligned_cols=30 Identities=27% Similarity=0.224 Sum_probs=22.2
Q ss_pred hcCceEEEEeccCCcCCCchhHHHHHHHcC
Q 012237 363 AKGVNVTVYNGQLDVICSTKGTEAWIEKLK 392 (467)
Q Consensus 363 ~~~irVLiy~Gd~D~i~n~~g~~~~i~~L~ 392 (467)
+...+||+..|..|..++....+...+.|+
T Consensus 143 ~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~ 172 (218)
T PF01738_consen 143 KIKAPVLILFGENDPFFPPEEVEALEEALK 172 (218)
T ss_dssp G--S-EEEEEETT-TTS-HHHHHHHHHHHH
T ss_pred ccCCCEeecCccCCCCCChHHHHHHHHHHH
Confidence 336899999999999999998888888885
No 200
>PRK06762 hypothetical protein; Provisional
Probab=31.31 E-value=28 Score=30.36 Aligned_cols=14 Identities=14% Similarity=0.525 Sum_probs=12.0
Q ss_pred CEEEEEcCCCChhh
Q 012237 68 PIILWLQGGPGASG 81 (467)
Q Consensus 68 PlilWlnGGPG~SS 81 (467)
|.+||+.|.|||.=
T Consensus 2 ~~li~i~G~~GsGK 15 (166)
T PRK06762 2 TTLIIIRGNSGSGK 15 (166)
T ss_pred CeEEEEECCCCCCH
Confidence 78999999998853
No 201
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=31.21 E-value=1.2e+02 Score=29.00 Aligned_cols=63 Identities=25% Similarity=0.341 Sum_probs=37.8
Q ss_pred ChHHHHHHHHHHHHHHHH-hC-----cccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCCC
Q 012237 133 NDVEAANDLTTLLMELFN-KN-----EILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSW 201 (467)
Q Consensus 133 ~~~~~a~d~~~fL~~f~~-~f-----p~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg~ 201 (467)
.+.+.+.++.++|.+=+. .. |++ ..+.|+|||=||+-+-.++.. +.+....+++++++.-+|.
T Consensus 62 ~~~~~~~~vi~Wl~~~L~~~l~~~v~~D~--s~l~l~GHSrGGk~Af~~al~----~~~~~~~~~~~ali~lDPV 130 (259)
T PF12740_consen 62 DEVASAAEVIDWLAKGLESKLPLGVKPDF--SKLALAGHSRGGKVAFAMALG----NASSSLDLRFSALILLDPV 130 (259)
T ss_pred hhHHHHHHHHHHHHhcchhhccccccccc--cceEEeeeCCCCHHHHHHHhh----hcccccccceeEEEEeccc
Confidence 445556666666655222 12 343 469999999999855544433 2222345689999995444
No 202
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=31.12 E-value=1.2e+02 Score=28.22 Aligned_cols=58 Identities=17% Similarity=0.221 Sum_probs=41.9
Q ss_pred CceEEEEeccCCcCCCchhHHHHHHHcCcccccccccCCCeeeEeCCCceeeeEEEEEcCEEEEEEcCCcccccCCCCcH
Q 012237 365 GVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFQVPVDQPC 444 (467)
Q Consensus 365 ~irVLiy~Gd~D~i~n~~g~~~~i~~L~W~g~~~f~~~~~~pw~~~~~~~~~G~~k~~~nltf~~V~~AGHm~vP~dqP~ 444 (467)
.++.|-+.|+.|.+++..-++..++..+ + . .+...-.||+ ||.-.|.
T Consensus 163 ~~PSLHi~G~~D~iv~~~~s~~L~~~~~--------------------~----------a--~vl~HpggH~-VP~~~~~ 209 (230)
T KOG2551|consen 163 STPSLHIFGETDTIVPSERSEQLAESFK--------------------D----------A--TVLEHPGGHI-VPNKAKY 209 (230)
T ss_pred CCCeeEEecccceeecchHHHHHHHhcC--------------------C----------C--eEEecCCCcc-CCCchHH
Confidence 4788999999999999887777777655 0 1 3667889999 9987652
Q ss_pred --HHHHHHHHHhc
Q 012237 445 --IALNMLAAMTD 455 (467)
Q Consensus 445 --~a~~mi~~fl~ 455 (467)
...+.|+.++.
T Consensus 210 ~~~i~~fi~~~~~ 222 (230)
T KOG2551|consen 210 KEKIADFIQSFLQ 222 (230)
T ss_pred HHHHHHHHHHHHH
Confidence 34455555544
No 203
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=30.96 E-value=47 Score=30.41 Aligned_cols=43 Identities=21% Similarity=0.325 Sum_probs=30.7
Q ss_pred hHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHH
Q 012237 134 DVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGL 177 (467)
Q Consensus 134 ~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~ 177 (467)
.+.+.+++..++ .++...|+....++-++|.|+||+++-.+|.
T Consensus 75 ~~~~~~~~~aa~-~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~ 117 (218)
T PF01738_consen 75 PEQVAADLQAAV-DYLRAQPEVDPGKIGVVGFCWGGKLALLLAA 117 (218)
T ss_dssp HHHHHHHHHHHH-HHHHCTTTCEEEEEEEEEETHHHHHHHHHHC
T ss_pred HHHHHHHHHHHH-HHHHhccccCCCcEEEEEEecchHHhhhhhh
Confidence 345556664444 4667777666789999999999988776664
No 204
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=30.96 E-value=74 Score=32.43 Aligned_cols=40 Identities=23% Similarity=0.249 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHH
Q 012237 136 EAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAA 179 (467)
Q Consensus 136 ~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i 179 (467)
+....+-..++.-+. ..++++.|.|||+||.++-.+-+..
T Consensus 101 ~~~~~lk~~ie~~~~----~~~~kv~li~HSmGgl~~~~fl~~~ 140 (389)
T PF02450_consen 101 EYFTKLKQLIEEAYK----KNGKKVVLIAHSMGGLVARYFLQWM 140 (389)
T ss_pred HHHHHHHHHHHHHHH----hcCCcEEEEEeCCCchHHHHHHHhc
Confidence 444444444444443 2378999999999998777766554
No 205
>COG3150 Predicted esterase [General function prediction only]
Probab=30.04 E-value=93 Score=27.80 Aligned_cols=59 Identities=22% Similarity=0.373 Sum_probs=41.2
Q ss_pred ccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCCCCCccchh
Q 012237 131 VKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPEDFV 208 (467)
Q Consensus 131 ~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg~i~p~~~~ 208 (467)
...-.++++.+-..++ ++..+..-|.|-|-||.|+--|+.+ .-|+.+++ ||-+-|...+
T Consensus 39 ~h~p~~a~~ele~~i~-------~~~~~~p~ivGssLGGY~At~l~~~-----------~Girav~~-NPav~P~e~l 97 (191)
T COG3150 39 PHDPQQALKELEKAVQ-------ELGDESPLIVGSSLGGYYATWLGFL-----------CGIRAVVF-NPAVRPYELL 97 (191)
T ss_pred CCCHHHHHHHHHHHHH-------HcCCCCceEEeecchHHHHHHHHHH-----------hCChhhhc-CCCcCchhhh
Confidence 4456677777777776 5666778999999999877766643 24555544 8888776543
No 206
>PF15253 STIL_N: SCL-interrupting locus protein N-terminus
Probab=28.76 E-value=71 Score=32.61 Aligned_cols=41 Identities=20% Similarity=0.578 Sum_probs=29.5
Q ss_pred CCCCCCCceeeeeEeCCCceEEEEEEEcCCCCCCCCC-CCCEE-EEEcC
Q 012237 29 NKNQDASEEWGYVEVRPKAHMFWWLYKSPYRIENPSK-PWPII-LWLQG 75 (467)
Q Consensus 29 ~~~~~~~~~sGyv~v~~~~~lFywf~es~~~~~~~~~-~~Pli-lWlnG 75 (467)
+....+...+||++.+...++.. .-|+ ||+. ..||| +||.|
T Consensus 193 ~~~~~~~~k~GfLTmDqtRkl~l-Lles-----Dpk~~slPLVGiWlsG 235 (410)
T PF15253_consen 193 LSQVQGTYKSGFLTMDQTRKLLL-LLES-----DPKASSLPLVGIWLSG 235 (410)
T ss_pred ccccccccccceeeEccccceEE-Eecc-----CCCccCCCceeeEecC
Confidence 44556777889999999888887 6664 4433 23776 89986
No 207
>KOG3101 consensus Esterase D [General function prediction only]
Probab=28.67 E-value=22 Score=32.84 Aligned_cols=45 Identities=22% Similarity=0.144 Sum_probs=29.4
Q ss_pred CCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCCCCCccchhcc
Q 012237 157 KSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPEDFVFS 210 (467)
Q Consensus 157 ~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg~i~p~~~~~~ 210 (467)
-.+.-|+|+|.|||=+-.++.+= .-..|++.--.|..+|...-.+
T Consensus 140 ~~k~~IfGHSMGGhGAl~~~Lkn---------~~kykSvSAFAPI~NP~~cpWG 184 (283)
T KOG3101|consen 140 PLKVGIFGHSMGGHGALTIYLKN---------PSKYKSVSAFAPICNPINCPWG 184 (283)
T ss_pred chhcceeccccCCCceEEEEEcC---------cccccceeccccccCcccCcch
Confidence 34589999999998655544321 1146777777777777655433
No 208
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=28.27 E-value=35 Score=34.71 Aligned_cols=39 Identities=23% Similarity=0.321 Sum_probs=22.2
Q ss_pred CCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCCCCCccc
Q 012237 158 SPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPED 206 (467)
Q Consensus 158 ~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg~i~p~~ 206 (467)
..+.++|+||||--+-..+. +. ..++..++-|||+-|..
T Consensus 228 ~~i~~~GHSFGGATa~~~l~---~d-------~r~~~~I~LD~W~~Pl~ 266 (379)
T PF03403_consen 228 SRIGLAGHSFGGATALQALR---QD-------TRFKAGILLDPWMFPLG 266 (379)
T ss_dssp EEEEEEEETHHHHHHHHHHH---H--------TT--EEEEES---TTS-
T ss_pred hheeeeecCchHHHHHHHHh---hc-------cCcceEEEeCCcccCCC
Confidence 45999999999954443222 11 25788888899998753
No 209
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=27.83 E-value=35 Score=29.96 Aligned_cols=14 Identities=29% Similarity=0.731 Sum_probs=10.2
Q ss_pred CCEEEEEcCCCChh
Q 012237 67 WPIILWLQGGPGAS 80 (467)
Q Consensus 67 ~PlilWlnGGPG~S 80 (467)
+|.+|||+|=||+.
T Consensus 1 ~g~vIwltGlsGsG 14 (156)
T PF01583_consen 1 KGFVIWLTGLSGSG 14 (156)
T ss_dssp S-EEEEEESSTTSS
T ss_pred CCEEEEEECCCCCC
Confidence 38999999977654
No 210
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=27.58 E-value=29 Score=32.43 Aligned_cols=57 Identities=19% Similarity=0.157 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCCCCCcc
Q 012237 136 EAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPE 205 (467)
Q Consensus 136 ~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg~i~p~ 205 (467)
-..+++..+++.-| +-...+ ..|+|.|.||.-+-.++.+-.+ -+.+++.-+|.+++.
T Consensus 97 ~l~~el~p~i~~~~---~~~~~~-~~i~G~S~GG~~Al~~~l~~Pd---------~F~~~~~~S~~~~~~ 153 (251)
T PF00756_consen 97 FLTEELIPYIEANY---RTDPDR-RAIAGHSMGGYGALYLALRHPD---------LFGAVIAFSGALDPS 153 (251)
T ss_dssp HHHTHHHHHHHHHS---SEEECC-EEEEEETHHHHHHHHHHHHSTT---------TESEEEEESEESETT
T ss_pred ehhccchhHHHHhc---ccccce-eEEeccCCCcHHHHHHHHhCcc---------ccccccccCcccccc
Confidence 34444555554433 333233 8999999999777776654322 478888877766654
No 211
>PRK14750 kdpF potassium-transporting ATPase subunit F; Provisional
Probab=27.28 E-value=61 Score=19.56 Aligned_cols=23 Identities=30% Similarity=0.433 Sum_probs=18.2
Q ss_pred hhHHHHHHHHHHhhhhcCccccc
Q 012237 4 LCGFVATLLFLVSLLFNGGAAAR 26 (467)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~ 26 (467)
.||.++++++++-|+.+-.+|++
T Consensus 6 i~g~llv~lLl~YLvYAL~naE~ 28 (29)
T PRK14750 6 VCGALLVLLLLGYLVYALFNAED 28 (29)
T ss_pred HHHHHHHHHHHHHHHHHHcCccc
Confidence 57888888888888887777764
No 212
>PRK07868 acyl-CoA synthetase; Validated
Probab=26.90 E-value=2.3e+02 Score=32.82 Aligned_cols=105 Identities=13% Similarity=0.094 Sum_probs=54.2
Q ss_pred CCEEEEEcCCCChhhhhcccccccCCCcccCCCC-Ccc---hh-c-cccceeecCCCccccccccCCCCcccChHHHHHH
Q 012237 67 WPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPR-NST---WL-K-KADLLFVDNPVGTGYSYVEDNSSFVKNDVEAAND 140 (467)
Q Consensus 67 ~PlilWlnGGPG~SS~~~g~f~E~GP~~~~l~~n-~~s---W~-~-~anvlfiDqPvGtGFSy~~~~~~~~~~~~~~a~d 140 (467)
.|.||.++|-+..+.++ +.. +.| |- + -..++=+| -|.|-..+. ....+..+....
T Consensus 67 ~~plllvhg~~~~~~~~--------------d~~~~~s~v~~L~~~g~~v~~~d----~G~~~~~~~-~~~~~l~~~i~~ 127 (994)
T PRK07868 67 GPPVLMVHPMMMSADMW--------------DVTRDDGAVGILHRAGLDPWVID----FGSPDKVEG-GMERNLADHVVA 127 (994)
T ss_pred CCcEEEECCCCCCccce--------------ecCCcccHHHHHHHCCCEEEEEc----CCCCChhHc-CccCCHHHHHHH
Confidence 48899999987666552 111 111 11 2 24677777 244432111 111233333334
Q ss_pred HHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCCCC
Q 012237 141 LTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWI 202 (467)
Q Consensus 141 ~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg~i 202 (467)
+.++|..-- +....+++|.|.|.||..+-.+|..- . .-.++++++-+.-+
T Consensus 128 l~~~l~~v~----~~~~~~v~lvG~s~GG~~a~~~aa~~-----~---~~~v~~lvl~~~~~ 177 (994)
T PRK07868 128 LSEAIDTVK----DVTGRDVHLVGYSQGGMFCYQAAAYR-----R---SKDIASIVTFGSPV 177 (994)
T ss_pred HHHHHHHHH----HhhCCceEEEEEChhHHHHHHHHHhc-----C---CCccceEEEEeccc
Confidence 444443211 12235899999999998776665421 0 11467776644433
No 213
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=26.82 E-value=44 Score=32.31 Aligned_cols=29 Identities=24% Similarity=0.345 Sum_probs=19.3
Q ss_pred HHHHHHhCcccCCCCEEEEecccCcchHH
Q 012237 145 LMELFNKNEILQKSPLFIVAESYGGKFAA 173 (467)
Q Consensus 145 L~~f~~~fp~~~~~~~yi~GESYgG~yvP 173 (467)
|.-|...-..|....++++|+|-||..+.
T Consensus 263 ldI~~~v~~~Ypda~iwlTGHSLGGa~As 291 (425)
T COG5153 263 LDILGAVRRIYPDARIWLTGHSLGGAIAS 291 (425)
T ss_pred HHHHHHHHHhCCCceEEEeccccchHHHH
Confidence 33344333455568899999999995443
No 214
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=26.82 E-value=44 Score=32.31 Aligned_cols=29 Identities=24% Similarity=0.345 Sum_probs=19.3
Q ss_pred HHHHHHhCcccCCCCEEEEecccCcchHH
Q 012237 145 LMELFNKNEILQKSPLFIVAESYGGKFAA 173 (467)
Q Consensus 145 L~~f~~~fp~~~~~~~yi~GESYgG~yvP 173 (467)
|.-|...-..|....++++|+|-||..+.
T Consensus 263 ldI~~~v~~~Ypda~iwlTGHSLGGa~As 291 (425)
T KOG4540|consen 263 LDILGAVRRIYPDARIWLTGHSLGGAIAS 291 (425)
T ss_pred HHHHHHHHHhCCCceEEEeccccchHHHH
Confidence 33344333455568899999999995443
No 215
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=26.35 E-value=81 Score=31.15 Aligned_cols=66 Identities=21% Similarity=0.286 Sum_probs=43.2
Q ss_pred cccceeecCCCccc-ccccc----------CCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHH
Q 012237 107 KADLLFVDNPVGTG-YSYVE----------DNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATL 175 (467)
Q Consensus 107 ~anvlfiDqPvGtG-FSy~~----------~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~l 175 (467)
..-|+|-|+=|||| |--.- -+.-+..+.++-.+.-|.||...|+ -+-.+|++|.|=|...+-.+
T Consensus 65 ~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI~~AYrFL~~~ye-----pGD~Iy~FGFSRGAf~aRVl 139 (423)
T COG3673 65 VTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNIREAYRFLIFNYE-----PGDEIYAFGFSRGAFSARVL 139 (423)
T ss_pred ceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHhcC-----CCCeEEEeeccchhHHHHHH
Confidence 45689999999987 22111 1112334556666777888876553 25689999999987666555
Q ss_pred HH
Q 012237 176 GL 177 (467)
Q Consensus 176 A~ 177 (467)
|-
T Consensus 140 ag 141 (423)
T COG3673 140 AG 141 (423)
T ss_pred HH
Confidence 53
No 216
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=25.25 E-value=1.5e+02 Score=28.31 Aligned_cols=64 Identities=17% Similarity=0.017 Sum_probs=34.5
Q ss_pred ChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCCCC
Q 012237 133 NDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWI 202 (467)
Q Consensus 133 ~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg~i 202 (467)
+....|+-+...|+..-+ +|.=+.+-+.|+|+||.-+- .++.+.-.....+-==|=|.||.|+-
T Consensus 81 ~~~~qa~wl~~vl~~L~~---~Y~~~~~N~VGHSmGg~~~~---~yl~~~~~~~~~P~l~K~V~Ia~pfn 144 (255)
T PF06028_consen 81 NYKKQAKWLKKVLKYLKK---KYHFKKFNLVGHSMGGLSWT---YYLENYGNDKNLPKLNKLVTIAGPFN 144 (255)
T ss_dssp HHHHHHHHHHHHHHHHHH---CC--SEEEEEEETHHHHHHH---HHHHHCTTGTTS-EEEEEEEES--TT
T ss_pred CHHHHHHHHHHHHHHHHH---hcCCCEEeEEEECccHHHHH---HHHHHhccCCCCcccceEEEeccccC
Confidence 455667767777766555 55557899999999996443 33333211222221224566665554
No 217
>PF12532 DUF3732: Protein of unknown function (DUF3732); InterPro: IPR022205 This domain family is found in bacteria and eukaryotes, and is typically between 180 and 198 amino acids in length. There is a conserved DQP sequence motif.
Probab=25.01 E-value=1e+02 Score=28.15 Aligned_cols=44 Identities=18% Similarity=0.443 Sum_probs=29.4
Q ss_pred ccceeecCCCccccccccC-----CCCc--ccChHHHHHHHHHHHHHHHHh
Q 012237 108 ADLLFVDNPVGTGYSYVED-----NSSF--VKNDVEAANDLTTLLMELFNK 151 (467)
Q Consensus 108 anvlfiDqPvGtGFSy~~~-----~~~~--~~~~~~~a~d~~~fL~~f~~~ 151 (467)
-+.|+||||.-|=|.-... .... ..+|..+.+.+..+|..|..+
T Consensus 101 P~fL~lDQPSQvYfp~~~~~~~~~~~~~~~~d~D~~aV~~~F~~L~~~~~~ 151 (193)
T PF12532_consen 101 PSFLFLDQPSQVYFPSRDKSEDFDEEELRERDEDIAAVRKMFSLLADFIKE 151 (193)
T ss_pred CCeeeecCCCcCcCCCcccccccchhhccccchHHHHHHHHHHHHHHHHHH
Confidence 3899999999888776111 1111 335566777788888888764
No 218
>PF00121 TIM: Triosephosphate isomerase; InterPro: IPR000652 Triosephosphate isomerase (5.3.1.1 from EC) (TIM) [] is the glycolytic enzyme that catalyses the reversible interconversion of glyceraldehyde 3-phosphate and dihydroxyacetone phosphate. TIM plays an important role in several metabolic pathways and is essential for efficient energy production. It is present in eukaryotes as well as in prokaryotes. TIM is a dimer of identical subunits, each of which is made up of about 250 amino-acid residues. A glutamic acid residue is involved in the catalytic mechanism [, ]. The tertiary structure of TIM has eight beta/alpha motifs folded into a barrel structure. The TIM barrel fold occurs ubiquitously and is found in numerous other enzymes that can be involved in energy metabolism, macromolecule metabolism, or small molecule metabolism []. The sequence around the active site residue is perfectly conserved in all known TIM's. Deficiencies in TIM are associated with haemolytic anaemia coupled with a progressive, severe neurological disorder [].; GO: 0004807 triose-phosphate isomerase activity, 0008152 metabolic process; PDB: 2YPI_A 1YPI_A 1NEY_B 1NF0_B 1I45_A 7TIM_A 3YPI_B 2H6R_H 2Y63_A 1N55_A ....
Probab=24.80 E-value=29 Score=33.00 Aligned_cols=63 Identities=17% Similarity=0.334 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHHHHHh-CcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCCCCCccch
Q 012237 135 VEAANDLTTLLMELFNK-NEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPEDF 207 (467)
Q Consensus 135 ~~~a~d~~~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg~i~p~~~ 207 (467)
.+-++.++.++++++.. |.+-..+.+-|. |||.--|.=+..+... .++.|+.||.+.+++..+
T Consensus 177 ~~~~~~~~~~Ir~~l~~~~~~~~~~~~~IL---YGGSV~~~N~~~l~~~-------~~iDG~LVG~asl~~~~F 240 (244)
T PF00121_consen 177 PEQIQEVHAFIREILAELYGEEVANNIRIL---YGGSVNPENAAELLSQ-------PDIDGVLVGGASLKAESF 240 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHHHHSEEE---EESSESTTTHHHHHTS-------TT-SEEEESGGGGSTHHH
T ss_pred HHHHHHHHHHHHHHHHHhccccccCceeEE---ECCcCCcccHHHHhcC-------CCCCEEEEchhhhcccch
Confidence 35566788999998753 322223344444 8998888877766542 279999999999987543
No 219
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=24.79 E-value=1.4e+02 Score=28.28 Aligned_cols=60 Identities=22% Similarity=0.313 Sum_probs=44.4
Q ss_pred CceEEEEeccCCcCCCchhHHHHHHHcCcccccccccCCCeeeEeCCCceeeeEEEEEcCEEEEEEcCCcccccCCCCcH
Q 012237 365 GVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFQVPVDQPC 444 (467)
Q Consensus 365 ~irVLiy~Gd~D~i~n~~g~~~~i~~L~W~g~~~f~~~~~~pw~~~~~~~~~G~~k~~~nltf~~V~~AGHm~vP~dqP~ 444 (467)
..+|.++.|+.|..|...-...|-+..+ . .++ ..+...||| -+..|.+
T Consensus 176 ~~pi~~~~G~~D~~vs~~~~~~W~~~t~------------~------------------~f~-l~~fdGgHF-fl~~~~~ 223 (244)
T COG3208 176 ACPIHAFGGEKDHEVSRDELGAWREHTK------------G------------------DFT-LRVFDGGHF-FLNQQRE 223 (244)
T ss_pred CcceEEeccCcchhccHHHHHHHHHhhc------------C------------------Cce-EEEecCcce-ehhhhHH
Confidence 4789999999999997665555544332 1 122 335677999 9999999
Q ss_pred HHHHHHHHHhcC
Q 012237 445 IALNMLAAMTDS 456 (467)
Q Consensus 445 ~a~~mi~~fl~~ 456 (467)
.....|.+.+.-
T Consensus 224 ~v~~~i~~~l~~ 235 (244)
T COG3208 224 EVLARLEQHLAH 235 (244)
T ss_pred HHHHHHHHHhhh
Confidence 999988888754
No 220
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=24.53 E-value=73 Score=29.74 Aligned_cols=28 Identities=14% Similarity=0.338 Sum_probs=23.4
Q ss_pred CceEEEEeccCCcCCCchhHHHHHHHcC
Q 012237 365 GVNVTVYNGQLDVICSTKGTEAWIEKLK 392 (467)
Q Consensus 365 ~irVLiy~Gd~D~i~n~~g~~~~i~~L~ 392 (467)
+++++|++|+.|..|+....++.++++.
T Consensus 169 ~~P~~v~hG~~D~tV~~~n~~~~~~q~~ 196 (220)
T PF10503_consen 169 GYPRIVFHGTADTTVNPQNADQLVAQWL 196 (220)
T ss_pred CCCEEEEecCCCCccCcchHHHHHHHHH
Confidence 5789999999999999888877776543
No 221
>TIGR01653 lactococcin_972 bacteriocin, lactococcin 972 family. This model represents bacteriocins related to lactococcin 972. Members tend to be found in association with a seven transmembrane putative immunity protein.
Probab=24.27 E-value=55 Score=25.99 Aligned_cols=24 Identities=42% Similarity=0.414 Sum_probs=16.8
Q ss_pred CcchhHHHHHHHHHHhhhhcCccccc
Q 012237 1 MEKLCGFVATLLFLVSLLFNGGAAAR 26 (467)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 26 (467)
||+.+ |++|+.++||..-.+.|.+
T Consensus 1 mkkk~--~~~~~~~~il~~~~g~a~~ 24 (92)
T TIGR01653 1 MKKKV--VASLVSTTILATLGGLAAQ 24 (92)
T ss_pred Cchhh--HHHHHHHHHHhhhhhhhee
Confidence 78877 7777777777766555555
No 222
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=24.01 E-value=1.4e+02 Score=32.21 Aligned_cols=34 Identities=29% Similarity=0.363 Sum_probs=30.2
Q ss_pred HHHHhcCceEEEEeccCCcCCCchhHHHHHHHcC
Q 012237 359 DELLAKGVNVTVYNGQLDVICSTKGTEAWIEKLK 392 (467)
Q Consensus 359 ~~LL~~~irVLiy~Gd~D~i~n~~g~~~~i~~L~ 392 (467)
+.||+-+.+||+..|..|..|.-..-|..-++|.
T Consensus 298 E~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMq 331 (784)
T KOG3253|consen 298 EALLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQ 331 (784)
T ss_pred hhhHhcCCceEEEecCCcccCCHHHHHHHHHHhh
Confidence 4688889999999999999999888888888776
No 223
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=23.75 E-value=1.3e+02 Score=28.24 Aligned_cols=43 Identities=16% Similarity=0.249 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHH
Q 012237 135 VEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLA 178 (467)
Q Consensus 135 ~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~ 178 (467)
.++..|+..++ .|+...|+-....+.++|-|+||+.+-..|.+
T Consensus 90 ~~~~~d~~a~~-~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~ 132 (236)
T COG0412 90 AEVLADIDAAL-DYLARQPQVDPKRIGVVGFCMGGGLALLAATR 132 (236)
T ss_pred HHHHHHHHHHH-HHHHhCCCCCCceEEEEEEcccHHHHHHhhcc
Confidence 56677776655 57777776667789999999999887777654
No 224
>COG4425 Predicted membrane protein [Function unknown]
Probab=23.39 E-value=1.1e+02 Score=31.77 Aligned_cols=36 Identities=19% Similarity=0.306 Sum_probs=31.5
Q ss_pred hHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccCc
Q 012237 134 DVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGG 169 (467)
Q Consensus 134 ~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG 169 (467)
-.++|+-+.+++-.....-|+=..-++|+.|||-|.
T Consensus 373 g~~aa~aLf~aVy~yw~qLP~~sRPKLylhG~SLGa 408 (588)
T COG4425 373 GADAARALFEAVYGYWTQLPKSSRPKLYLHGESLGA 408 (588)
T ss_pred chhHHHHHHHHHHHHHHhCCcCCCCceEEecccccc
Confidence 468899999999999999998777789999999985
No 225
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=23.35 E-value=82 Score=28.94 Aligned_cols=48 Identities=19% Similarity=0.170 Sum_probs=30.3
Q ss_pred CceEEEEeccCCcCCCchhHHHHHHHcCcccccccccCCCeeeEeCCCceeeeEEEEEcCEEEEEEcCCcccccCCCCcH
Q 012237 365 GVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFQVPVDQPC 444 (467)
Q Consensus 365 ~irVLiy~Gd~D~i~n~~g~~~~i~~L~W~g~~~f~~~~~~pw~~~~~~~~~G~~k~~~nltf~~V~~AGHm~vP~dqP~ 444 (467)
.+++|-+.|..|.+++...++...+...= . .-+.....||. ||...+.
T Consensus 161 ~iPtlHv~G~~D~~~~~~~s~~L~~~~~~------------------------------~-~~v~~h~gGH~-vP~~~~~ 208 (212)
T PF03959_consen 161 SIPTLHVIGENDPVVPPERSEALAEMFDP------------------------------D-ARVIEHDGGHH-VPRKKED 208 (212)
T ss_dssp --EEEEEEETT-SSS-HHHHHHHHHHHHH------------------------------H-EEEEEESSSSS-----HHH
T ss_pred CCCeEEEEeCCCCCcchHHHHHHHHhccC------------------------------C-cEEEEECCCCc-CcCChhh
Confidence 58999999999999997777777766550 1 23567799999 9988764
No 226
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=23.17 E-value=1.8e+02 Score=30.93 Aligned_cols=33 Identities=9% Similarity=0.009 Sum_probs=22.8
Q ss_pred HHHHHHHHhCcccCCCCEEEEecccCcchHHHHH
Q 012237 143 TLLMELFNKNEILQKSPLFIVAESYGGKFAATLG 176 (467)
Q Consensus 143 ~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA 176 (467)
+++++....|-. -.+++-|+|+|.||..|-.+.
T Consensus 181 ~wv~~~I~~FGG-dp~~vTl~G~saGa~~v~~l~ 213 (545)
T KOG1516|consen 181 RWVKDNIPSFGG-DPKNVTLFGHSAGAASVSLLT 213 (545)
T ss_pred HHHHHHHHhcCC-CCCeEEEEeechhHHHHHHHh
Confidence 555555555542 246799999999998876654
No 227
>PF05049 IIGP: Interferon-inducible GTPase (IIGP); InterPro: IPR007743 Interferon-inducible GTPase (IIGP) is thought to play a role in in intracellular defence. IIGP is predominantly associated with the Golgi apparatus and also localizes to the endoplasmic reticulum and exerts a distinct role in IFN-induced intracellular membrane trafficking or processing [].; GO: 0005525 GTP binding, 0016817 hydrolase activity, acting on acid anhydrides, 0016020 membrane; PDB: 1TPZ_A 1TQD_A 1TQ6_A 1TQ2_B 1TQ4_A.
Probab=23.10 E-value=45 Score=33.80 Aligned_cols=52 Identities=27% Similarity=0.423 Sum_probs=31.8
Q ss_pred CCEEEEEcCCCCh--hhhhcccccccCCCc----------ccCCCCCcchhccccceeecCCCccc
Q 012237 67 WPIILWLQGGPGA--SGVGIGNFEEVGPFD----------TYLKPRNSTWLKKADLLFVDNPVGTG 120 (467)
Q Consensus 67 ~PlilWlnGGPG~--SS~~~g~f~E~GP~~----------~~l~~n~~sW~~~anvlfiDqPvGtG 120 (467)
.|+=|=+.|-+|+ ||+ +-.|-.+|+=. ....+.+|.--++-||.++|-| |+|
T Consensus 34 ~~l~IaV~G~sGsGKSSf-INalrGl~~~d~~aA~tGv~etT~~~~~Y~~p~~pnv~lWDlP-G~g 97 (376)
T PF05049_consen 34 APLNIAVTGESGSGKSSF-INALRGLGHEDEGAAPTGVVETTMEPTPYPHPKFPNVTLWDLP-GIG 97 (376)
T ss_dssp --EEEEEEESTTSSHHHH-HHHHTT--TTSTTS--SSSHSCCTS-EEEE-SS-TTEEEEEE---GG
T ss_pred CceEEEEECCCCCCHHHH-HHHHhCCCCCCcCcCCCCCCcCCCCCeeCCCCCCCCCeEEeCC-CCC
Confidence 3888888896555 887 66666666542 2345567887899999999999 888
No 228
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=22.93 E-value=71 Score=29.20 Aligned_cols=60 Identities=20% Similarity=0.247 Sum_probs=39.9
Q ss_pred HhcCceEEEEeccCCcCCCchhHHHHHHHcCcccccccccCCCeeeEeCCCceeeeEEEEEcCEEEEEEcCCcccccCCC
Q 012237 362 LAKGVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFQVPVD 441 (467)
Q Consensus 362 L~~~irVLiy~Gd~D~i~n~~g~~~~i~~L~W~g~~~f~~~~~~pw~~~~~~~~~G~~k~~~nltf~~V~~AGHm~vP~d 441 (467)
..--..++|.+|+.|-++ .+...|+|... ..++.+++.+|.|+ -- .
T Consensus 146 ~P~P~~~lvi~g~~Ddvv------~l~~~l~~~~~--------------------------~~~~~i~i~~a~HF-F~-g 191 (210)
T COG2945 146 APCPSPGLVIQGDADDVV------DLVAVLKWQES--------------------------IKITVITIPGADHF-FH-G 191 (210)
T ss_pred cCCCCCceeEecChhhhh------cHHHHHHhhcC--------------------------CCCceEEecCCCce-ec-c
Confidence 333578999999999544 56666776422 14667899999999 43 3
Q ss_pred CcHHHHHHHHHHhc
Q 012237 442 QPCIALNMLAAMTD 455 (467)
Q Consensus 442 qP~~a~~mi~~fl~ 455 (467)
+=....+.+..|+.
T Consensus 192 Kl~~l~~~i~~~l~ 205 (210)
T COG2945 192 KLIELRDTIADFLE 205 (210)
T ss_pred cHHHHHHHHHHHhh
Confidence 44455566666663
No 229
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=22.61 E-value=1.9e+02 Score=29.31 Aligned_cols=130 Identities=21% Similarity=0.322 Sum_probs=69.8
Q ss_pred eEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhcccccccCCCcccCCCCCcchh--ccccceeecCCCcccccccc
Q 012237 48 HMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWL--KKADLLFVDNPVGTGYSYVE 125 (467)
Q Consensus 48 ~lFywf~es~~~~~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~l~~n~~sW~--~~anvlfiDqPvGtGFSy~~ 125 (467)
+++|....-.+ ...+++-.|| |-++|=||.== =|..+=|...+ ++.|+=. -..+||----| |-|||-..
T Consensus 135 ~iHFlhvk~p~-~k~~k~v~Pl-Ll~HGwPGsv~----EFykfIPlLT~--p~~hg~~~d~~FEVI~PSlP-GygwSd~~ 205 (469)
T KOG2565|consen 135 KIHFLHVKPPQ-KKKKKKVKPL-LLLHGWPGSVR----EFYKFIPLLTD--PKRHGNESDYAFEVIAPSLP-GYGWSDAP 205 (469)
T ss_pred eEEEEEecCCc-cccCCcccce-EEecCCCchHH----HHHhhhhhhcC--ccccCCccceeEEEeccCCC-CcccCcCC
Confidence 45554443221 1223344465 56899998542 23333343322 2223322 23456655666 99999765
Q ss_pred CCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCCCCCc
Q 012237 126 DNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISP 204 (467)
Q Consensus 126 ~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg~i~p 204 (467)
+... -+..++|+=+...+- ++.-++|||=|--||-....-+|+...+ |+.|+=+-+..+.|
T Consensus 206 sk~G--Fn~~a~ArvmrkLMl-------RLg~nkffiqGgDwGSiI~snlasLyPe---------nV~GlHlnm~~~~s 266 (469)
T KOG2565|consen 206 SKTG--FNAAATARVMRKLML-------RLGYNKFFIQGGDWGSIIGSNLASLYPE---------NVLGLHLNMCFVNS 266 (469)
T ss_pred ccCC--ccHHHHHHHHHHHHH-------HhCcceeEeecCchHHHHHHHHHhhcch---------hhhHhhhcccccCC
Confidence 4432 356666664443332 3445789997666666555555554333 67777776666554
No 230
>PRK10115 protease 2; Provisional
Probab=22.59 E-value=1.4e+02 Score=32.97 Aligned_cols=28 Identities=21% Similarity=0.321 Sum_probs=25.6
Q ss_pred Cce-EEEEeccCCcCCCchhHHHHHHHcC
Q 012237 365 GVN-VTVYNGQLDVICSTKGTEAWIEKLK 392 (467)
Q Consensus 365 ~ir-VLiy~Gd~D~i~n~~g~~~~i~~L~ 392 (467)
.++ +||.+|..|..||...+++|+..|+
T Consensus 605 ~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr 633 (686)
T PRK10115 605 AYPHLLVTTGLHDSQVQYWEPAKWVAKLR 633 (686)
T ss_pred CCCceeEEecCCCCCcCchHHHHHHHHHH
Confidence 578 6788999999999999999999997
No 231
>KOG3877 consensus NADH:ubiquinone oxidoreductase, NDUFA10/42kDa subunit [Energy production and conversion]
Probab=22.35 E-value=81 Score=30.51 Aligned_cols=51 Identities=20% Similarity=0.464 Sum_probs=35.9
Q ss_pred hhccccceeecCCCccccccccCCCCcccChHHHHHHHHHHHHHHHHhCcccCCCCEEEEecccCcch
Q 012237 104 WLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKF 171 (467)
Q Consensus 104 W~~~anvlfiDqPvGtGFSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~y 171 (467)
.++.+-||-||-|+|+|-|.- ..+.|+++ =|..||+++--.+|+ .|||+-.
T Consensus 67 f~enSkvI~VeGnI~sGK~kl---------AKelAe~L------gf~hfP~~~~d~iyv--dsyg~D~ 117 (393)
T KOG3877|consen 67 FHENSKVIVVEGNIGSGKTKL---------AKELAEQL------GFVHFPEFRMDDIYV--DSYGNDL 117 (393)
T ss_pred hcccceEEEEeCCcccCchhH---------HHHHHHHh------CCcccccccccceee--cccCccc
Confidence 456678999999999997731 22344432 256899998777777 6999843
No 232
>PRK13962 bifunctional phosphoglycerate kinase/triosephosphate isomerase; Provisional
Probab=21.72 E-value=1.1e+02 Score=33.55 Aligned_cols=62 Identities=15% Similarity=0.267 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHHHHHHh-CcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCCCCCccc
Q 012237 135 VEAANDLTTLLMELFNK-NEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPED 206 (467)
Q Consensus 135 ~~~a~d~~~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg~i~p~~ 206 (467)
.+.+++.+.++++++.. +-.-....+=|. |||.--|.-+..|... -++.|+.||...+++..
T Consensus 574 ~e~aqevh~~IR~~l~~~~~~~~a~~~rIl---YGGSV~~~N~~~l~~~-------~diDG~LVGgASL~~~~ 636 (645)
T PRK13962 574 PEQAQEVHAFIRKLVAELYGEEAARKVRIL---YGGSVKSENAAGLFNQ-------PDIDGGLVGGASLKAQE 636 (645)
T ss_pred HHHHHHHHHHHHHHHHHHhChhhhccceEE---ecCCCCHhHHHHHhcC-------CCCCeEEeehHhcCHHH
Confidence 45667789999999863 322212233343 9999999999888653 27999999999998754
No 233
>PF05414 DUF1717: Viral domain of unknown function (DUF1717); InterPro: IPR008745 The domain is found towards the N terminus of the polyprotein of Apple stem grooving virus (strain P-209) (ASGV), Citrus tatter leaf virus and from Apple stem grooving virus (strain Korea) (ASGV) (Pear black necrotic leaf spot virus). Its function is unknown [, ].
Probab=21.67 E-value=57 Score=25.11 Aligned_cols=11 Identities=36% Similarity=0.721 Sum_probs=10.0
Q ss_pred CceEEEEeccC
Q 012237 365 GVNVTVYNGQL 375 (467)
Q Consensus 365 ~irVLiy~Gd~ 375 (467)
|+||+||.||.
T Consensus 40 gyrVhiyyGdS 50 (101)
T PF05414_consen 40 GYRVHIYYGDS 50 (101)
T ss_pred ccEEEEEecce
Confidence 89999999974
No 234
>PLN02200 adenylate kinase family protein
Probab=21.19 E-value=79 Score=29.71 Aligned_cols=20 Identities=30% Similarity=0.690 Sum_probs=14.9
Q ss_pred CCCCCCCEEEEEcCCCChhh
Q 012237 62 NPSKPWPIILWLQGGPGASG 81 (467)
Q Consensus 62 ~~~~~~PlilWlnGGPG~SS 81 (467)
.|....|.+|++.|.||+.=
T Consensus 37 ~~~~~~~~ii~I~G~PGSGK 56 (234)
T PLN02200 37 SSKEKTPFITFVLGGPGSGK 56 (234)
T ss_pred CccCCCCEEEEEECCCCCCH
Confidence 34344599999999999853
No 235
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=21.10 E-value=72 Score=29.09 Aligned_cols=110 Identities=15% Similarity=0.174 Sum_probs=58.8
Q ss_pred CCCEEEEEcCCCChhhhhcccccccCCCcccCCCCCcchhc-----cccceeecCCCccccccccCC---CCcccChHHH
Q 012237 66 PWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLK-----KADLLFVDNPVGTGYSYVEDN---SSFVKNDVEA 137 (467)
Q Consensus 66 ~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~l~~n~~sW~~-----~anvlfiDqPvGtGFSy~~~~---~~~~~~~~~~ 137 (467)
..|+||+|+|+++.++. +. ..+.|.+ -+.||..|.| |.|.+...-. ..........
T Consensus 12 ~~P~vv~lHG~~~~~~~-~~--------------~~~~~~~~a~~~g~~Vv~Pd~~-g~~~~~~~~~~~~~~~~~~~~~~ 75 (212)
T TIGR01840 12 PRALVLALHGCGQTASA-YV--------------IDWGWKAAADRYGFVLVAPEQT-SYNSSNNCWDWFFTHHRARGTGE 75 (212)
T ss_pred CCCEEEEeCCCCCCHHH-Hh--------------hhcChHHHHHhCCeEEEecCCc-CccccCCCCCCCCccccCCCCcc
Confidence 46999999999987664 21 0112332 3578888987 5443221000 0000000112
Q ss_pred HHHHHHHHHHHHHhCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCCC
Q 012237 138 ANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSW 201 (467)
Q Consensus 138 a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg~ 201 (467)
..++.++++...++++ ....+++|+|+|.||..+-.++.+-.+ .+.++++..|.
T Consensus 76 ~~~~~~~i~~~~~~~~-id~~~i~l~G~S~Gg~~a~~~a~~~p~---------~~~~~~~~~g~ 129 (212)
T TIGR01840 76 VESLHQLIDAVKANYS-IDPNRVYVTGLSAGGGMTAVLGCTYPD---------VFAGGASNAGL 129 (212)
T ss_pred HHHHHHHHHHHHHhcC-cChhheEEEEECHHHHHHHHHHHhCch---------hheEEEeecCC
Confidence 3334444444444432 334689999999999776666543111 36677665544
No 236
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=21.01 E-value=1.9e+02 Score=25.31 Aligned_cols=69 Identities=20% Similarity=0.214 Sum_probs=37.4
Q ss_pred CccccccccCCCCcccChHHHHHHHHHHHHHHHHhCcc-cCCCCEEEEecccCcc-hHHHHHHHHHHHHHc
Q 012237 117 VGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEI-LQKSPLFIVAESYGGK-FAATLGLAAVKAIEA 185 (467)
Q Consensus 117 vGtGFSy~~~~~~~~~~~~~~a~d~~~fL~~f~~~fp~-~~~~~~yi~GESYgG~-yvP~lA~~i~~~~~~ 185 (467)
||.|-...+.....-.+-++.|..+..|-+.|-+.++. -....+-|.|.|-+.. --+.||..+.....+
T Consensus 62 VGHG~~~~~~~~l~g~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~~~~~~fa~~f~~~L~~ 132 (157)
T PF11713_consen 62 VGHGRDEFNNQTLAGYSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADNNKQESFALQFAQALKK 132 (157)
T ss_dssp E--EESSTSSSEETTEEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-TTGGGSHHHHHHHHHHH
T ss_pred EEeCCCcCCCceeCCCCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCCcccccHHHHHHHHHHh
Confidence 47775522222122334556666665555666665422 2345799999999987 667777777665543
No 237
>PRK15492 triosephosphate isomerase; Provisional
Probab=20.29 E-value=1.5e+02 Score=28.53 Aligned_cols=60 Identities=13% Similarity=0.174 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHHHH-hCcccCCCCEEEEecccCcchHHHHHHHHHHHHHcCcceeeeeeEeecCCCCCccc
Q 012237 136 EAANDLTTLLMELFN-KNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPED 206 (467)
Q Consensus 136 ~~a~d~~~fL~~f~~-~fp~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~IGNg~i~p~~ 206 (467)
+.+++..+++++++. .+-+- ...+-|. |||---|.-+..|... -++.|+.||..-++|..
T Consensus 189 e~~~~~~~~Ir~~l~~~~~~~-~~~irIL---YGGSV~~~N~~~l~~~-------~diDG~LvG~aSl~~~~ 249 (260)
T PRK15492 189 DYADEKHAVIKQCLIELFGDA-GDDIPVF---YGGSVNAENANELFGQ-------PHIDGLFIGRSAWDADK 249 (260)
T ss_pred HHHHHHHHHHHHHHHHHhccc-cCceeEE---EcCccCHHHHHHHhcC-------CCCCEEEeehhhcCHHH
Confidence 444668899999865 34322 3345555 9999999998888653 27999999999998754
No 238
>cd03871 M14_CPB Peptidase M14 Carboxypeptidase B (CPB) belongs to the carboxypeptidase A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Carboxypeptidase B (CPB) enzymes only cleave the basic residues lysine or arginine. A/B subfamily enzymes are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The procarboxypeptidase B (PCPB) is produced by the exocrine pancreas and stored as stable zymogen in the pancreatic granules until secretion into the digestive tract occurs. PCPB has been reported to be a good serum marker for the diagnosis of acute pancreatitis and graft rejection in pancreas transplant recipients.
Probab=20.10 E-value=1.7e+02 Score=28.73 Aligned_cols=33 Identities=9% Similarity=0.107 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHhCcccCCCCEEEEecccCcchHH
Q 012237 139 NDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAA 173 (467)
Q Consensus 139 ~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP 173 (467)
+++.++|+++-+.||++. .++..|.||-|+-++
T Consensus 10 ~ei~~~l~~la~~~p~~v--~~~~IG~S~eGR~i~ 42 (300)
T cd03871 10 ETIEAWTEQVASENPDLI--SRSQIGTTFEGRPIY 42 (300)
T ss_pred HHHHHHHHHHHHHCCCce--EEEEeeeCCCCCeeE
Confidence 457789999999999874 688889999997444
Done!