Query 012238
Match_columns 467
No_of_seqs 298 out of 2157
Neff 9.2
Searched_HMMs 46136
Date Fri Mar 29 00:31:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012238.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012238hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1448 TyrB Aspartate/tyrosin 100.0 5E-68 1.1E-72 496.3 38.3 395 59-463 2-396 (396)
2 KOG1411 Aspartate aminotransfe 100.0 1.6E-66 3.4E-71 475.3 29.8 409 49-466 18-426 (427)
3 PLN02397 aspartate transaminas 100.0 2.4E-61 5.3E-66 488.5 46.4 422 36-466 1-422 (423)
4 KOG1412 Aspartate aminotransfe 100.0 4.9E-61 1.1E-65 433.4 34.5 402 56-466 3-406 (410)
5 PTZ00376 aspartate aminotransf 100.0 3E-58 6.4E-63 464.6 43.0 399 58-465 4-403 (404)
6 PRK09257 aromatic amino acid a 100.0 7.8E-57 1.7E-61 453.5 43.4 393 59-463 2-396 (396)
7 COG0436 Aspartate/tyrosine/aro 100.0 1.6E-56 3.5E-61 445.6 37.7 345 83-466 28-392 (393)
8 PLN00175 aminotransferase fami 100.0 1.3E-49 2.7E-54 402.0 36.1 359 60-465 34-413 (413)
9 PRK07366 succinyldiaminopimela 100.0 6.6E-49 1.4E-53 395.1 35.5 342 81-462 28-387 (388)
10 KOG0257 Kynurenine aminotransf 100.0 7.6E-50 1.7E-54 377.7 25.8 363 61-460 11-414 (420)
11 PRK07681 aspartate aminotransf 100.0 2.1E-48 4.6E-53 392.6 35.6 339 82-462 31-385 (399)
12 PRK08636 aspartate aminotransf 100.0 3.2E-48 7E-53 391.6 36.6 348 81-466 31-401 (403)
13 PTZ00377 alanine aminotransfer 100.0 6.3E-48 1.4E-52 397.2 38.3 362 81-465 44-475 (481)
14 PRK08068 transaminase; Reviewe 100.0 5E-48 1.1E-52 388.7 35.5 340 82-462 31-386 (389)
15 PRK13355 bifunctional HTH-doma 100.0 1.5E-47 3.3E-52 397.5 39.9 376 58-466 119-515 (517)
16 PRK06855 aminotransferase; Val 100.0 1.2E-47 2.7E-52 389.9 38.1 354 82-465 31-429 (433)
17 PLN02187 rooty/superroot1 100.0 1.6E-47 3.5E-52 390.7 38.9 355 80-465 63-438 (462)
18 PRK06207 aspartate aminotransf 100.0 1.1E-47 2.4E-52 387.4 36.7 345 83-466 39-403 (405)
19 PLN00143 tyrosine/nicotianamin 100.0 1.3E-47 2.8E-52 387.3 37.2 364 73-465 22-404 (409)
20 PRK09147 succinyldiaminopimela 100.0 1.7E-47 3.7E-52 385.7 37.3 357 65-464 8-395 (396)
21 PLN00145 tyrosine/nicotianamin 100.0 5.9E-47 1.3E-51 384.0 39.9 355 82-465 51-424 (430)
22 PLN02656 tyrosine transaminase 100.0 3E-47 6.6E-52 384.9 37.6 351 80-466 28-404 (409)
23 PRK07682 hypothetical protein; 100.0 1.9E-47 4.1E-52 383.3 35.0 341 83-466 20-377 (378)
24 PRK06348 aspartate aminotransf 100.0 2E-47 4.3E-52 383.6 35.2 353 66-462 14-382 (384)
25 PRK09276 LL-diaminopimelate am 100.0 2.9E-47 6.4E-52 382.8 35.4 340 81-461 29-384 (385)
26 PRK09148 aminotransferase; Val 100.0 4.6E-47 1E-51 383.1 36.6 344 81-465 28-390 (405)
27 TIGR03540 DapC_direct LL-diami 100.0 3.9E-47 8.4E-52 381.7 35.8 340 81-461 27-382 (383)
28 PRK08960 hypothetical protein; 100.0 3.6E-47 7.7E-52 382.3 35.6 356 64-464 11-386 (387)
29 PLN02231 alanine transaminase 100.0 1.5E-46 3.2E-51 387.5 39.6 354 82-465 128-527 (534)
30 PRK06290 aspartate aminotransf 100.0 6.2E-47 1.3E-51 381.5 35.5 342 82-466 43-406 (410)
31 TIGR01264 tyr_amTase_E tyrosin 100.0 1.1E-46 2.4E-51 380.4 36.4 365 69-466 15-400 (401)
32 PRK06107 aspartate aminotransf 100.0 1.4E-46 3E-51 379.6 36.4 345 81-466 31-401 (402)
33 PRK05942 aspartate aminotransf 100.0 1.3E-46 2.9E-51 378.9 35.8 341 81-462 33-389 (394)
34 PLN02450 1-aminocyclopropane-1 100.0 1.6E-46 3.4E-51 384.0 36.6 347 84-466 39-431 (468)
35 PRK12414 putative aminotransfe 100.0 1.2E-46 2.6E-51 377.7 34.3 335 83-461 29-383 (384)
36 PRK07337 aminotransferase; Val 100.0 2.4E-46 5.2E-51 376.5 34.9 338 81-463 28-387 (388)
37 PRK05957 aspartate aminotransf 100.0 4.7E-46 1E-50 374.1 36.4 344 83-466 27-386 (389)
38 TIGR03538 DapC_gpp succinyldia 100.0 7.6E-46 1.7E-50 373.4 36.8 339 81-462 26-392 (393)
39 PRK06108 aspartate aminotransf 100.0 7.5E-46 1.6E-50 372.5 36.6 342 83-464 24-381 (382)
40 PTZ00433 tyrosine aminotransfe 100.0 9.1E-46 2E-50 374.6 37.4 350 81-466 31-409 (412)
41 PRK07309 aromatic amino acid a 100.0 9.6E-46 2.1E-50 372.1 37.2 342 83-466 30-389 (391)
42 PRK07324 transaminase; Validat 100.0 2.6E-46 5.6E-51 373.6 32.7 334 82-466 25-371 (373)
43 PLN02607 1-aminocyclopropane-1 100.0 9.7E-46 2.1E-50 375.4 36.6 351 79-465 42-437 (447)
44 PRK07683 aminotransferase A; V 100.0 8.6E-46 1.9E-50 371.9 35.6 339 83-465 28-383 (387)
45 PLN02376 1-aminocyclopropane-1 100.0 1.4E-45 3E-50 378.3 37.4 348 84-465 47-438 (496)
46 PRK08912 hypothetical protein; 100.0 1.1E-45 2.4E-50 371.5 35.3 340 83-465 26-386 (387)
47 PRK07590 L,L-diaminopimelate a 100.0 2.2E-45 4.7E-50 371.7 35.4 347 82-463 33-409 (409)
48 PRK05764 aspartate aminotransf 100.0 3.5E-45 7.6E-50 368.9 36.8 367 58-466 4-392 (393)
49 PRK09082 methionine aminotrans 100.0 1E-45 2.2E-50 371.4 32.4 336 83-461 30-385 (386)
50 PRK05839 hypothetical protein; 100.0 2.6E-45 5.6E-50 366.7 34.7 339 74-465 15-374 (374)
51 PRK08361 aspartate aminotransf 100.0 1.8E-45 3.9E-50 370.4 33.4 343 83-466 33-391 (391)
52 PRK08175 aminotransferase; Val 100.0 6.3E-45 1.4E-49 366.8 36.7 345 81-466 27-390 (395)
53 PRK08637 hypothetical protein; 100.0 1.6E-44 3.5E-49 362.8 39.0 361 84-467 4-388 (388)
54 PRK07777 aminotransferase; Val 100.0 1.2E-44 2.5E-49 364.1 36.3 353 66-463 10-384 (387)
55 KOG0259 Tyrosine aminotransfer 100.0 2.7E-44 5.8E-49 333.9 35.2 355 83-465 61-433 (447)
56 PRK07550 hypothetical protein; 100.0 1.6E-44 3.5E-49 363.0 36.4 356 67-462 11-384 (386)
57 TIGR01265 tyr_nico_aTase tyros 100.0 4.8E-44 1.1E-48 361.2 38.0 365 70-466 16-402 (403)
58 PLN02368 alanine transaminase 100.0 1.1E-44 2.3E-49 363.2 32.6 334 70-427 26-404 (407)
59 PRK08363 alanine aminotransfer 100.0 5.1E-44 1.1E-48 360.7 37.2 349 81-465 28-394 (398)
60 COG1167 ARO8 Transcriptional r 100.0 2.5E-44 5.5E-49 365.9 35.1 348 82-466 88-456 (459)
61 TIGR03537 DapC succinyldiamino 100.0 3.6E-44 7.8E-49 355.6 35.3 330 84-461 1-349 (350)
62 PRK09265 aminotransferase AlaT 100.0 8.4E-44 1.8E-48 359.7 38.2 353 81-466 31-402 (404)
63 PRK15481 transcriptional regul 100.0 1.4E-44 3E-49 368.3 31.9 330 83-464 85-430 (431)
64 PRK07568 aspartate aminotransf 100.0 1.1E-43 2.4E-48 358.5 36.4 341 83-466 30-393 (397)
65 PRK09275 aspartate aminotransf 100.0 2.1E-44 4.6E-49 366.5 30.7 347 84-466 101-518 (527)
66 PF00155 Aminotran_1_2: Aminot 100.0 3.5E-44 7.7E-49 357.9 28.4 344 84-459 2-363 (363)
67 PRK07865 N-succinyldiaminopime 100.0 2.9E-43 6.2E-48 351.1 33.2 345 58-460 3-363 (364)
68 TIGR03542 DAPAT_plant LL-diami 100.0 4.8E-43 1.1E-47 353.8 34.9 342 81-463 31-402 (402)
69 PRK02610 histidinol-phosphate 100.0 1.3E-42 2.8E-47 347.4 36.7 333 83-466 28-372 (374)
70 COG1168 MalY Bifunctional PLP- 100.0 2E-42 4.3E-47 324.2 34.9 347 81-466 23-387 (388)
71 PRK01533 histidinol-phosphate 100.0 6.7E-43 1.5E-47 347.5 31.6 324 82-465 28-355 (366)
72 TIGR03801 asp_4_decarbox aspar 100.0 2.6E-42 5.6E-47 350.8 31.4 348 84-466 95-517 (521)
73 TIGR03539 DapC_actino succinyl 100.0 4.7E-42 1E-46 341.3 31.9 332 70-459 9-356 (357)
74 PRK06836 aspartate aminotransf 100.0 1.9E-41 4.2E-46 341.2 36.2 340 83-466 33-392 (394)
75 PRK06358 threonine-phosphate d 100.0 2.7E-41 5.9E-46 335.2 35.9 335 70-463 7-353 (354)
76 PRK14809 histidinol-phosphate 100.0 2.4E-41 5.1E-46 336.5 35.5 330 70-465 18-357 (357)
77 PRK03317 histidinol-phosphate 100.0 2.1E-41 4.7E-46 338.1 34.4 329 84-464 27-363 (368)
78 PRK09440 avtA valine--pyruvate 100.0 5E-41 1.1E-45 341.0 34.9 345 82-466 29-412 (416)
79 PRK08056 threonine-phosphate d 100.0 1.7E-40 3.7E-45 329.9 35.4 338 66-464 4-354 (356)
80 PLN02672 methionine S-methyltr 100.0 9.9E-41 2.1E-45 358.5 35.7 344 81-464 695-1079(1082)
81 PLN03026 histidinol-phosphate 100.0 2.3E-40 4.9E-45 331.4 35.5 316 82-462 51-379 (380)
82 KOG0256 1-aminocyclopropane-1- 100.0 7.7E-41 1.7E-45 313.6 29.8 315 120-464 115-460 (471)
83 PRK09105 putative aminotransfe 100.0 1.8E-40 3.8E-45 330.8 33.7 317 83-464 43-369 (370)
84 PRK03158 histidinol-phosphate 100.0 1.6E-40 3.5E-45 330.9 33.3 319 83-462 29-358 (359)
85 PRK05166 histidinol-phosphate 100.0 2.7E-40 5.8E-45 330.4 34.5 324 82-463 35-369 (371)
86 PRK07392 threonine-phosphate d 100.0 5.1E-40 1.1E-44 327.1 35.1 321 83-464 22-358 (360)
87 PRK05387 histidinol-phosphate 100.0 2.9E-40 6.3E-45 328.4 32.5 316 83-464 24-352 (353)
88 PRK04870 histidinol-phosphate 100.0 3.5E-40 7.6E-45 328.0 33.0 320 83-463 26-356 (356)
89 COG0079 HisC Histidinol-phosph 100.0 5.6E-40 1.2E-44 321.3 33.8 319 84-465 23-354 (356)
90 PRK08153 histidinol-phosphate 100.0 7.3E-40 1.6E-44 326.8 33.5 322 82-466 31-366 (369)
91 PRK06225 aspartate aminotransf 100.0 8E-39 1.7E-43 321.0 35.8 332 83-467 28-378 (380)
92 PRK14808 histidinol-phosphate 100.0 6.7E-39 1.4E-43 315.4 33.0 309 83-461 19-333 (335)
93 PRK14807 histidinol-phosphate 100.0 1.4E-38 3E-43 315.6 34.9 319 83-463 22-350 (351)
94 PRK03967 histidinol-phosphate 100.0 8.9E-39 1.9E-43 315.0 33.1 310 83-465 18-334 (337)
95 PRK07908 hypothetical protein; 100.0 3.5E-38 7.5E-43 312.7 34.0 316 81-464 20-346 (349)
96 PRK06959 putative threonine-ph 100.0 4E-38 8.6E-43 310.2 32.1 320 66-466 8-334 (339)
97 PRK04781 histidinol-phosphate 100.0 3.2E-38 7E-43 314.2 31.8 296 120-463 54-361 (364)
98 PRK06425 histidinol-phosphate 100.0 2.7E-38 5.9E-43 311.0 30.8 285 120-463 35-331 (332)
99 PRK02731 histidinol-phosphate 100.0 7.9E-38 1.7E-42 312.5 34.5 323 81-464 30-365 (367)
100 PRK01688 histidinol-phosphate 100.0 2E-38 4.4E-43 314.2 29.2 311 84-460 29-351 (351)
101 PRK03321 putative aminotransfe 100.0 4.9E-38 1.1E-42 312.2 31.3 322 84-465 23-351 (352)
102 PRK05664 threonine-phosphate d 100.0 2.2E-37 4.8E-42 304.2 31.8 300 84-465 21-328 (330)
103 PRK04635 histidinol-phosphate 100.0 1.6E-37 3.6E-42 308.3 29.3 312 83-462 31-352 (354)
104 TIGR01141 hisC histidinol-phos 100.0 7.7E-37 1.7E-41 302.9 31.3 315 83-460 19-346 (346)
105 PRK00950 histidinol-phosphate 100.0 1.9E-36 4.1E-41 301.9 34.1 325 70-463 22-360 (361)
106 TIGR01140 L_thr_O3P_dcar L-thr 100.0 1.9E-36 4.1E-41 297.7 30.5 316 67-459 2-329 (330)
107 KOG0634 Aromatic amino acid am 100.0 4.4E-36 9.5E-41 284.0 29.9 321 119-465 93-466 (472)
108 PRK08354 putative aminotransfe 100.0 8.7E-36 1.9E-40 290.6 32.4 292 83-462 8-309 (311)
109 PRK13238 tnaA tryptophanase/L- 100.0 1.1E-31 2.3E-36 272.6 33.8 338 80-464 33-432 (460)
110 cd00609 AAT_like Aspartate ami 100.0 1.7E-31 3.7E-36 264.5 33.5 333 86-461 1-350 (350)
111 COG3977 Alanine-alpha-ketoisov 100.0 6.8E-31 1.5E-35 237.2 28.5 361 70-466 16-412 (417)
112 KOG0258 Alanine aminotransfera 100.0 1.4E-28 3.1E-33 229.6 29.7 322 118-464 105-468 (475)
113 cd00617 Tnase_like Tryptophana 100.0 1.5E-27 3.2E-32 239.1 30.9 342 81-465 9-408 (431)
114 PRK10534 L-threonine aldolase; 100.0 6.1E-28 1.3E-32 237.9 26.8 316 86-464 2-332 (333)
115 TIGR03576 pyridox_MJ0158 pyrid 100.0 1.6E-26 3.4E-31 227.4 31.8 293 103-464 35-346 (346)
116 TIGR01822 2am3keto_CoA 2-amino 100.0 4.8E-26 1E-30 229.7 34.3 325 82-466 37-390 (393)
117 PRK06939 2-amino-3-ketobutyrat 100.0 2.4E-26 5.3E-31 232.1 31.9 330 81-466 40-394 (397)
118 TIGR00858 bioF 8-amino-7-oxono 100.0 4E-26 8.7E-31 227.3 32.2 318 82-460 15-360 (360)
119 PLN02721 threonine aldolase 100.0 8.2E-26 1.8E-30 224.6 31.3 324 84-465 6-352 (353)
120 TIGR01825 gly_Cac_T_rel pyrido 100.0 1.8E-25 3.8E-30 224.9 33.7 330 82-466 32-382 (385)
121 PRK10874 cysteine sulfinate de 100.0 7.8E-26 1.7E-30 228.6 31.2 325 84-466 19-399 (401)
122 TIGR03392 FeS_syn_CsdA cystein 100.0 1.7E-25 3.7E-30 225.9 32.4 326 84-466 16-396 (398)
123 PLN02822 serine palmitoyltrans 100.0 7.2E-26 1.6E-30 232.0 29.3 326 82-466 108-478 (481)
124 TIGR00707 argD acetylornithine 100.0 1.3E-25 2.9E-30 225.3 30.4 332 82-463 26-379 (379)
125 KOG0633 Histidinol phosphate a 99.9 1.4E-26 2.9E-31 205.5 18.8 276 145-462 82-374 (375)
126 PRK02627 acetylornithine amino 99.9 2.2E-25 4.8E-30 225.0 30.0 336 82-466 38-395 (396)
127 PLN02483 serine palmitoyltrans 99.9 6.3E-25 1.4E-29 225.5 33.3 330 83-466 100-467 (489)
128 PRK13392 5-aminolevulinate syn 99.9 7.7E-25 1.7E-29 221.9 32.2 327 83-466 46-398 (410)
129 cd06502 TA_like Low-specificit 99.9 4.2E-25 9.1E-30 218.2 29.3 306 103-461 11-337 (338)
130 PRK05958 8-amino-7-oxononanoat 99.9 1.7E-24 3.7E-29 217.7 32.3 323 81-463 37-385 (385)
131 cd00378 SHMT Serine-glycine hy 99.9 6.6E-25 1.4E-29 222.0 28.7 328 83-465 19-385 (402)
132 PRK02948 cysteine desulfurase; 99.9 7.1E-25 1.5E-29 220.2 27.5 325 93-466 3-375 (381)
133 TIGR02539 SepCysS Sep-tRNA:Cys 99.9 2.2E-24 4.8E-29 215.4 30.4 311 103-466 21-369 (370)
134 PRK09295 bifunctional cysteine 99.9 3.1E-24 6.7E-29 217.2 31.1 335 84-464 23-403 (406)
135 cd06454 KBL_like KBL_like; thi 99.9 4.8E-24 1E-28 211.6 30.8 319 84-462 2-348 (349)
136 TIGR01979 sufS cysteine desulf 99.9 6.8E-24 1.5E-28 214.7 32.4 326 83-466 17-402 (403)
137 PF12897 Aminotran_MocR: Alani 99.9 3.7E-24 8E-29 201.9 26.4 314 120-464 62-414 (425)
138 PRK01278 argD acetylornithine 99.9 8.7E-24 1.9E-28 212.7 30.0 337 82-466 30-389 (389)
139 PRK03244 argD acetylornithine 99.9 1.2E-23 2.6E-28 212.4 30.0 328 82-466 42-395 (398)
140 PRK07049 methionine gamma-lyas 99.9 2.4E-23 5.1E-28 210.3 31.9 221 124-399 81-311 (427)
141 PLN02855 Bifunctional selenocy 99.9 1.6E-23 3.6E-28 213.1 29.9 326 84-466 32-419 (424)
142 TIGR03403 nifS_epsilon cystein 99.9 1E-23 2.2E-28 211.8 27.3 329 93-466 2-376 (382)
143 PLN02242 methionine gamma-lyas 99.9 1.5E-23 3.2E-28 211.0 28.1 217 124-400 74-298 (418)
144 cd06452 SepCysS Sep-tRNA:Cys-t 99.9 6.3E-23 1.4E-27 204.4 31.4 307 102-463 13-360 (361)
145 PRK13479 2-aminoethylphosphona 99.9 7E-23 1.5E-27 204.7 31.5 323 102-466 16-364 (368)
146 TIGR00713 hemL glutamate-1-sem 99.9 5.3E-23 1.1E-27 209.2 30.8 338 82-466 47-423 (423)
147 cd06451 AGAT_like Alanine-glyo 99.9 9.1E-23 2E-27 203.0 31.9 313 100-464 8-356 (356)
148 TIGR01976 am_tr_V_VC1184 cyste 99.9 6.7E-23 1.4E-27 207.0 30.1 322 85-459 18-397 (397)
149 TIGR03301 PhnW-AepZ 2-aminoeth 99.9 1.8E-22 3.9E-27 200.7 30.5 312 102-463 10-355 (355)
150 PRK07179 hypothetical protein; 99.9 5E-22 1.1E-26 201.1 33.5 323 81-466 52-399 (407)
151 cd00613 GDC-P Glycine cleavage 99.9 6.9E-23 1.5E-27 207.0 27.1 326 84-459 21-398 (398)
152 cd00610 OAT_like Acetyl ornith 99.9 9.9E-23 2.1E-27 206.9 28.0 336 82-463 35-413 (413)
153 PLN02409 serine--glyoxylate am 99.9 3.3E-22 7.1E-27 201.6 31.2 331 98-466 16-373 (401)
154 TIGR01821 5aminolev_synth 5-am 99.9 7.3E-22 1.6E-26 199.6 33.6 327 83-466 45-397 (402)
155 PRK09064 5-aminolevulinate syn 99.9 9.5E-22 2.1E-26 199.2 34.1 326 83-466 46-398 (407)
156 PRK02936 argD acetylornithine 99.9 5.6E-22 1.2E-26 198.8 31.9 334 82-463 28-377 (377)
157 PRK05093 argD bifunctional N-s 99.9 2.8E-22 6E-27 202.6 29.8 329 82-466 39-401 (403)
158 cd06453 SufS_like Cysteine des 99.9 2.8E-22 6E-27 200.8 29.4 314 93-459 2-373 (373)
159 PRK09331 Sep-tRNA:Cys-tRNA syn 99.9 2.2E-21 4.8E-26 194.9 33.1 324 84-466 19-382 (387)
160 PRK08247 cystathionine gamma-s 99.9 1.9E-21 4.2E-26 193.5 30.9 274 124-466 50-365 (366)
161 TIGR03402 FeS_nifS cysteine de 99.9 7E-22 1.5E-26 198.3 28.0 323 93-466 2-373 (379)
162 COG1104 NifS Cysteine sulfinat 99.9 5.7E-22 1.2E-26 190.5 25.9 328 92-466 3-378 (386)
163 TIGR02326 transamin_PhnW 2-ami 99.9 1.3E-21 2.9E-26 195.2 29.5 323 100-464 12-361 (363)
164 PRK06234 methionine gamma-lyas 99.9 2.4E-21 5.3E-26 194.7 31.5 166 124-328 62-234 (400)
165 PRK04073 rocD ornithine--oxo-a 99.9 4.3E-21 9.4E-26 193.4 32.0 326 82-463 39-395 (396)
166 PRK13393 5-aminolevulinate syn 99.9 1.6E-20 3.5E-25 190.0 34.9 327 83-466 45-397 (406)
167 PRK08088 4-aminobutyrate amino 99.9 3.3E-21 7.1E-26 195.8 29.3 342 82-466 40-424 (425)
168 COG0520 csdA Selenocysteine ly 99.9 1.5E-20 3.3E-25 187.3 33.1 331 95-464 27-404 (405)
169 TIGR01437 selA_rel uncharacter 99.9 7.8E-21 1.7E-25 188.8 31.0 310 84-463 9-363 (363)
170 PRK00011 glyA serine hydroxyme 99.9 4.1E-21 8.9E-26 195.1 29.2 323 83-465 25-389 (416)
171 PRK13520 L-tyrosine decarboxyl 99.9 8.5E-21 1.8E-25 189.9 30.9 318 102-465 32-371 (371)
172 PRK04260 acetylornithine amino 99.9 1.6E-20 3.6E-25 188.0 31.9 328 82-463 28-375 (375)
173 TIGR01977 am_tr_V_EF2568 cyste 99.9 1.5E-20 3.2E-25 188.5 31.2 320 102-461 12-375 (376)
174 TIGR02006 IscS cysteine desulf 99.9 2.6E-21 5.7E-26 195.4 25.8 322 93-466 6-378 (402)
175 cd06450 DOPA_deC_like DOPA dec 99.9 3.1E-21 6.6E-26 191.2 25.3 299 103-461 12-344 (345)
176 PRK12381 bifunctional succinyl 99.9 1.3E-20 2.8E-25 190.4 29.8 336 82-466 38-400 (406)
177 PRK08249 cystathionine gamma-s 99.9 1.6E-20 3.4E-25 188.3 29.6 215 124-399 62-280 (398)
178 TIGR03812 tyr_de_CO2_Arch tyro 99.9 2.4E-20 5.2E-25 186.8 30.7 314 103-461 33-372 (373)
179 PRK06460 hypothetical protein; 99.9 2E-20 4.2E-25 186.6 29.2 214 124-399 43-261 (376)
180 PLN03227 serine palmitoyltrans 99.9 4E-20 8.7E-25 185.5 31.1 328 86-466 1-383 (392)
181 PRK08133 O-succinylhomoserine 99.9 3.6E-20 7.7E-25 185.6 29.8 214 125-399 60-277 (390)
182 PRK07504 O-succinylhomoserine 99.9 2.9E-20 6.4E-25 186.6 29.1 214 124-396 63-280 (398)
183 PRK08045 cystathionine gamma-s 99.9 5.2E-20 1.1E-24 183.8 30.6 215 124-399 50-269 (386)
184 PRK00451 glycine dehydrogenase 99.9 2.2E-20 4.8E-25 191.4 28.7 324 84-463 69-446 (447)
185 PRK00854 rocD ornithine--oxo-a 99.9 2.1E-19 4.6E-24 181.6 33.9 328 82-464 40-400 (401)
186 TIGR02080 O_succ_thio_ly O-suc 99.9 5.8E-20 1.3E-24 183.3 29.2 219 120-396 46-266 (382)
187 PRK07582 cystathionine gamma-l 99.9 4.2E-20 9.1E-25 183.6 27.3 272 124-465 49-365 (366)
188 PRK14012 cysteine desulfurase; 99.9 6.7E-20 1.5E-24 185.4 27.4 320 92-466 5-380 (404)
189 COG0075 Serine-pyruvate aminot 99.9 3.4E-19 7.3E-24 172.9 30.9 325 98-466 12-364 (383)
190 PRK06767 methionine gamma-lyas 99.9 7.7E-20 1.7E-24 183.2 27.0 275 124-465 59-385 (386)
191 PRK08776 cystathionine gamma-s 99.9 1.8E-19 3.9E-24 180.9 29.3 213 124-396 58-275 (405)
192 TIGR01328 met_gam_lyase methio 99.9 3.1E-19 6.7E-24 178.8 29.4 167 124-328 57-227 (391)
193 PRK07811 cystathionine gamma-s 99.9 3.9E-19 8.6E-24 178.0 30.1 213 124-396 59-276 (388)
194 PRK07503 methionine gamma-lyas 99.9 3.4E-19 7.4E-24 179.2 29.5 214 124-396 63-281 (403)
195 TIGR03235 DNA_S_dndA cysteine 99.9 8.9E-20 1.9E-24 181.3 24.6 293 94-439 2-321 (353)
196 TIGR01325 O_suc_HS_sulf O-succ 99.9 5.2E-19 1.1E-23 176.8 29.5 216 124-400 52-271 (380)
197 PTZ00125 ornithine aminotransf 99.9 9.4E-19 2E-23 176.9 31.7 338 82-466 30-396 (400)
198 cd00614 CGS_like CGS_like: Cys 99.9 4.6E-19 1E-23 176.8 28.8 216 124-400 38-258 (369)
199 PLN00144 acetylornithine trans 99.9 8.5E-19 1.9E-23 175.3 30.7 336 82-466 14-381 (382)
200 PRK08861 cystathionine gamma-s 99.9 6.3E-19 1.4E-23 175.5 29.0 213 124-396 51-268 (388)
201 PRK07050 cystathionine beta-ly 99.9 1.1E-18 2.5E-23 174.8 30.5 213 124-396 63-280 (394)
202 PRK07810 O-succinylhomoserine 99.8 8.8E-19 1.9E-23 176.0 28.8 213 124-396 68-285 (403)
203 PRK08574 cystathionine gamma-s 99.8 1.3E-18 2.7E-23 173.9 29.4 213 124-396 51-267 (385)
204 PRK11658 UDP-4-amino-4-deoxy-L 99.8 3.3E-18 7.2E-23 171.2 32.1 188 103-328 13-202 (379)
205 PRK07269 cystathionine gamma-s 99.8 1.1E-18 2.3E-23 173.0 27.8 277 124-464 52-363 (364)
206 PRK00062 glutamate-1-semialdeh 99.8 2.8E-18 6E-23 174.2 30.2 334 82-466 49-425 (426)
207 TIGR03246 arg_catab_astC succi 99.8 3.7E-18 8E-23 172.0 30.4 329 82-466 34-396 (397)
208 PRK09028 cystathionine beta-ly 99.8 5E-18 1.1E-22 168.9 30.1 218 120-399 53-277 (394)
209 TIGR02379 ECA_wecE TDP-4-keto- 99.8 3.2E-18 6.9E-23 170.6 28.7 190 102-328 9-202 (376)
210 PRK05937 8-amino-7-oxononanoat 99.8 7.5E-18 1.6E-22 168.4 31.4 325 83-466 4-351 (370)
211 PLN02651 cysteine desulfurase 99.8 1.6E-18 3.5E-23 172.9 25.9 296 93-438 2-321 (364)
212 PRK07505 hypothetical protein; 99.8 5.6E-18 1.2E-22 171.2 30.0 323 82-465 45-399 (402)
213 PRK09792 4-aminobutyrate trans 99.8 1.2E-17 2.6E-22 169.0 32.4 342 82-465 39-421 (421)
214 TIGR00700 GABAtrnsam 4-aminobu 99.8 1.5E-17 3.2E-22 168.7 32.3 339 82-464 32-419 (420)
215 PLN02624 ornithine-delta-amino 99.8 2.4E-17 5.2E-22 169.0 33.9 333 82-465 74-444 (474)
216 TIGR01885 Orn_aminotrans ornit 99.8 2.9E-17 6.2E-22 166.0 33.3 331 82-464 36-401 (401)
217 PRK06918 4-aminobutyrate amino 99.8 1.9E-17 4.2E-22 169.2 32.3 343 82-466 53-444 (451)
218 PRK08064 cystathionine beta-ly 99.8 7.9E-18 1.7E-22 168.7 28.8 210 126-396 54-268 (390)
219 TIGR01326 OAH_OAS_sulfhy OAH/O 99.8 9.9E-18 2.1E-22 169.5 28.2 158 124-317 55-216 (418)
220 PRK06777 4-aminobutyrate amino 99.8 3.3E-17 7.1E-22 165.9 31.9 341 82-464 39-420 (421)
221 PRK07671 cystathionine beta-ly 99.8 2E-17 4.4E-22 164.9 29.7 212 124-396 48-264 (377)
222 PRK08248 O-acetylhomoserine am 99.8 2E-17 4.3E-22 167.2 29.6 157 125-317 63-223 (431)
223 PRK05939 hypothetical protein; 99.8 2.7E-17 5.8E-22 164.8 30.1 154 128-317 49-205 (397)
224 PF00266 Aminotran_5: Aminotra 99.8 1.6E-17 3.5E-22 166.2 27.7 321 94-455 3-371 (371)
225 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.8 3.4E-17 7.3E-22 163.8 29.4 188 103-328 10-201 (375)
226 PRK04366 glycine dehydrogenase 99.8 2.4E-17 5.2E-22 169.5 28.6 342 86-466 71-449 (481)
227 TIGR01329 cysta_beta_ly_E cyst 99.8 1.9E-17 4.2E-22 165.2 26.8 162 128-328 49-215 (378)
228 PLN02509 cystathionine beta-ly 99.8 3.5E-17 7.6E-22 165.7 28.7 221 120-399 125-349 (464)
229 PRK04612 argD acetylornithine 99.8 6.5E-17 1.4E-21 162.7 29.9 339 82-465 39-403 (408)
230 PRK06702 O-acetylhomoserine am 99.8 4.5E-17 9.8E-22 163.5 28.1 153 126-313 61-222 (432)
231 PRK06176 cystathionine gamma-s 99.8 5.5E-17 1.2E-21 161.8 28.2 165 126-328 50-218 (380)
232 PRK08360 4-aminobutyrate amino 99.8 1.3E-16 2.7E-21 162.2 31.3 342 82-466 40-427 (443)
233 PRK06084 O-acetylhomoserine am 99.8 7.4E-17 1.6E-21 162.9 29.2 157 125-317 57-217 (425)
234 PRK05968 hypothetical protein; 99.8 4.8E-17 1E-21 163.0 27.5 211 126-399 63-279 (389)
235 TIGR01324 cysta_beta_ly_B cyst 99.8 1.1E-16 2.3E-21 159.3 29.7 162 128-328 52-218 (377)
236 cd00615 Orn_deC_like Ornithine 99.8 7.1E-18 1.5E-22 163.0 19.8 172 122-317 55-231 (294)
237 TIGR03531 selenium_SpcS O-phos 99.8 1.1E-16 2.3E-21 160.5 27.6 228 128-399 107-344 (444)
238 PRK07495 4-aminobutyrate amino 99.8 7.2E-16 1.6E-20 156.0 30.9 340 82-467 39-423 (425)
239 PRK05967 cystathionine beta-ly 99.8 4.6E-16 1E-20 154.6 28.4 206 130-396 68-278 (395)
240 TIGR01814 kynureninase kynuren 99.8 4.2E-16 9.2E-21 157.7 28.8 335 83-463 26-405 (406)
241 COG0156 BioF 7-keto-8-aminopel 99.8 2.9E-15 6.2E-20 146.9 32.0 321 82-462 38-387 (388)
242 cd00616 AHBA_syn 3-amino-5-hyd 99.8 1.5E-15 3.3E-20 150.8 30.1 182 109-328 4-188 (352)
243 PLN02955 8-amino-7-oxononanoat 99.7 3E-15 6.4E-20 150.2 31.3 320 83-465 102-461 (476)
244 PRK08117 4-aminobutyrate amino 99.7 1.6E-15 3.5E-20 154.5 29.5 341 82-466 42-430 (433)
245 TIGR03588 PseC UDP-4-keto-6-de 99.7 2E-15 4.3E-20 151.6 29.7 192 103-328 9-205 (380)
246 PRK15407 lipopolysaccharide bi 99.7 2.4E-15 5.3E-20 152.5 30.4 167 128-328 65-241 (438)
247 KOG1549 Cysteine desulfurase N 99.7 1.8E-15 3.9E-20 146.4 26.2 202 81-317 40-254 (428)
248 PRK13034 serine hydroxymethylt 99.7 1.4E-14 3.1E-19 146.5 34.2 323 83-465 28-392 (416)
249 PRK05994 O-acetylhomoserine am 99.7 3.8E-15 8.3E-20 150.8 29.1 156 126-317 63-222 (427)
250 COG0399 WecE Predicted pyridox 99.7 1.8E-14 4E-19 140.2 31.1 191 103-328 14-204 (374)
251 COG2008 GLY1 Threonine aldolas 99.7 1E-14 2.2E-19 137.7 27.9 313 102-463 12-341 (342)
252 PRK06058 4-aminobutyrate amino 99.7 1.8E-14 3.9E-19 146.9 31.5 341 82-466 55-443 (443)
253 TIGR02407 ectoine_ectB diamino 99.7 1.2E-14 2.7E-19 146.8 29.8 341 82-465 34-412 (412)
254 PRK05964 adenosylmethionine--8 99.7 3.4E-14 7.3E-19 144.4 31.9 341 82-466 41-423 (423)
255 PTZ00094 serine hydroxymethylt 99.7 1.3E-14 2.9E-19 148.5 28.1 327 83-464 34-407 (452)
256 PRK09264 diaminobutyrate--2-ox 99.7 5.2E-14 1.1E-18 142.9 32.0 346 82-466 38-417 (425)
257 TIGR02618 tyr_phenol_ly tyrosi 99.7 2.8E-14 6.1E-19 141.4 28.8 318 104-465 50-426 (450)
258 PRK08134 O-acetylhomoserine am 99.7 3E-14 6.5E-19 144.1 29.5 156 126-317 64-223 (433)
259 cd01494 AAT_I Aspartate aminot 99.7 1.2E-15 2.5E-20 134.6 15.5 166 128-317 2-168 (170)
260 KOG1368 Threonine aldolase [Am 99.7 3.4E-14 7.4E-19 129.4 24.7 309 102-463 34-366 (384)
261 PF01053 Cys_Met_Meta_PP: Cys/ 99.7 4.6E-14 1E-18 140.0 28.0 215 125-399 54-274 (386)
262 PRK13580 serine hydroxymethylt 99.7 3E-14 6.5E-19 143.2 26.2 327 84-465 50-445 (493)
263 PRK07812 O-acetylhomoserine am 99.7 6E-14 1.3E-18 141.8 28.2 157 126-317 69-229 (436)
264 TIGR00709 dat 2,4-diaminobutyr 99.7 4.9E-13 1.1E-17 136.3 33.9 340 82-466 38-436 (442)
265 PRK08114 cystathionine beta-ly 99.7 1.1E-13 2.3E-18 137.6 27.8 211 125-396 61-278 (395)
266 COG0112 GlyA Glycine/serine hy 99.6 1.8E-13 3.9E-18 130.2 26.6 324 84-465 27-390 (413)
267 PRK02769 histidine decarboxyla 99.6 1.7E-13 3.7E-18 136.3 28.0 292 129-465 68-372 (380)
268 PLN02271 serine hydroxymethylt 99.6 4.3E-13 9.3E-18 135.4 30.7 340 84-464 149-539 (586)
269 cd00611 PSAT_like Phosphoserin 99.6 4.9E-14 1.1E-18 139.9 23.9 313 99-462 7-353 (355)
270 PRK08593 4-aminobutyrate amino 99.6 7.8E-13 1.7E-17 134.7 32.8 341 82-466 41-430 (445)
271 PF01041 DegT_DnrJ_EryC1: DegT 99.6 1E-13 2.3E-18 138.1 25.9 190 103-328 4-195 (363)
272 PRK13237 tyrosine phenol-lyase 99.6 2.9E-13 6.2E-18 134.6 28.5 303 120-465 72-433 (460)
273 COG4992 ArgD Ornithine/acetylo 99.6 8.5E-13 1.8E-17 127.3 30.7 337 81-466 40-399 (404)
274 PLN03226 serine hydroxymethylt 99.6 3.7E-13 7.9E-18 137.6 29.5 335 84-464 35-418 (475)
275 TIGR01788 Glu-decarb-GAD gluta 99.6 3.1E-13 6.8E-18 136.3 28.4 322 103-466 54-430 (431)
276 COG0001 HemL Glutamate-1-semia 99.6 4.4E-13 9.6E-18 130.6 28.2 327 83-466 53-429 (432)
277 PRK03715 argD acetylornithine 99.6 7.6E-13 1.6E-17 132.9 31.0 337 82-466 35-394 (395)
278 TIGR01364 serC_1 phosphoserine 99.6 2.6E-13 5.6E-18 133.9 27.0 312 103-465 4-348 (349)
279 PF04864 Alliinase_C: Allinase 99.6 9.1E-15 2E-19 137.0 15.1 286 128-462 45-362 (363)
280 COG0626 MetC Cystathionine bet 99.6 1E-12 2.2E-17 128.9 29.7 278 125-466 62-395 (396)
281 PRK05613 O-acetylhomoserine am 99.6 5.2E-13 1.1E-17 135.0 28.6 157 126-317 69-229 (437)
282 PLN02482 glutamate-1-semialdeh 99.6 1.4E-12 2.9E-17 133.3 31.8 338 82-466 98-474 (474)
283 PRK04311 selenocysteine syntha 99.6 8.6E-13 1.9E-17 133.9 30.1 342 84-464 80-463 (464)
284 PRK06541 hypothetical protein; 99.6 1.1E-12 2.3E-17 134.1 31.0 340 82-466 51-456 (460)
285 PRK05355 3-phosphoserine/phosp 99.6 3.6E-13 7.8E-18 133.6 26.8 318 98-465 10-358 (360)
286 KOG2862 Alanine-glyoxylate ami 99.6 1E-12 2.2E-17 120.6 27.2 314 102-465 28-382 (385)
287 PRK03080 phosphoserine aminotr 99.6 2.8E-13 6E-18 135.7 25.9 324 83-466 11-374 (378)
288 PRK06434 cystathionine gamma-l 99.6 7.2E-13 1.6E-17 131.8 28.4 212 125-399 63-278 (384)
289 PLN02724 Molybdenum cofactor s 99.6 2.7E-13 5.8E-18 147.7 25.6 344 92-464 36-487 (805)
290 PRK00615 glutamate-1-semialdeh 99.6 2E-12 4.3E-17 130.9 30.1 340 82-466 52-429 (433)
291 PRK05769 4-aminobutyrate amino 99.6 4.5E-12 9.6E-17 129.1 32.8 342 82-466 53-440 (441)
292 PRK12389 glutamate-1-semialdeh 99.6 7.2E-12 1.6E-16 127.3 32.8 336 82-466 52-428 (428)
293 PLN03032 serine decarboxylase; 99.6 2.3E-12 4.9E-17 127.4 27.4 286 128-461 68-372 (374)
294 KOG0053 Cystathionine beta-lya 99.6 1.9E-12 4.1E-17 125.4 25.9 187 125-360 76-266 (409)
295 TIGR01366 serC_3 phosphoserine 99.6 2.4E-12 5.2E-17 127.9 26.7 318 98-466 10-361 (361)
296 PF00464 SHMT: Serine hydroxym 99.5 9.4E-13 2E-17 129.6 22.6 321 84-459 21-399 (399)
297 PRK11522 putrescine--2-oxoglut 99.5 1.8E-11 3.8E-16 125.0 31.4 343 82-466 81-452 (459)
298 COG0160 GabT 4-aminobutyrate a 99.5 1.1E-11 2.5E-16 123.0 29.0 341 82-466 55-446 (447)
299 TIGR03372 putres_am_tran putre 99.5 4.9E-11 1.1E-15 120.9 32.6 333 82-463 74-442 (442)
300 PRK07046 aminotransferase; Val 99.5 4.9E-11 1.1E-15 121.6 32.0 331 82-466 74-451 (453)
301 TIGR00474 selA seryl-tRNA(sec) 99.5 1.5E-11 3.3E-16 124.5 27.5 214 84-328 75-307 (454)
302 PRK15029 arginine decarboxylas 99.5 6.5E-12 1.4E-16 133.0 25.7 183 122-322 201-402 (755)
303 PF01276 OKR_DC_1: Orn/Lys/Arg 99.5 3.3E-13 7.2E-18 133.3 14.9 181 124-323 64-257 (417)
304 COG1103 Archaea-specific pyrid 99.5 2.2E-11 4.8E-16 109.8 24.2 315 103-466 30-381 (382)
305 PF01212 Beta_elim_lyase: Beta 99.5 5.3E-13 1.2E-17 127.5 14.7 200 103-328 8-214 (290)
306 PRK07986 adenosylmethionine--8 99.5 4.7E-11 1E-15 120.9 28.9 341 82-465 42-423 (428)
307 PRK06173 adenosylmethionine--8 99.5 1.5E-10 3.3E-15 117.3 31.9 341 82-466 43-426 (429)
308 PRK06943 adenosylmethionine--8 99.5 1.6E-10 3.5E-15 117.9 32.2 340 82-466 53-447 (453)
309 PRK05639 4-aminobutyrate amino 99.5 2.3E-10 5E-15 116.8 33.3 338 82-466 52-444 (457)
310 COG2873 MET17 O-acetylhomoseri 99.5 2.5E-11 5.5E-16 114.5 23.7 166 125-326 61-230 (426)
311 PLN02414 glycine dehydrogenase 99.5 5.7E-11 1.2E-15 129.3 29.2 298 128-465 570-907 (993)
312 PRK06082 4-aminobutyrate amino 99.5 3.9E-10 8.5E-15 115.3 33.8 338 82-466 71-452 (459)
313 PRK06062 hypothetical protein; 99.4 1.7E-10 3.6E-15 117.8 30.7 339 82-466 52-446 (451)
314 TIGR00508 bioA adenosylmethion 99.4 2.3E-10 5E-15 116.1 31.5 340 82-465 44-426 (427)
315 PRK07482 hypothetical protein; 99.4 3.6E-10 7.7E-15 115.8 32.8 342 82-466 49-455 (461)
316 PRK05965 hypothetical protein; 99.4 3.9E-10 8.5E-15 115.4 32.7 344 82-466 45-448 (459)
317 PRK13360 omega amino acid--pyr 99.4 1.3E-10 2.8E-15 118.4 28.8 344 82-466 45-441 (442)
318 PRK07481 hypothetical protein; 99.4 4.3E-10 9.3E-15 114.9 32.6 344 82-466 41-446 (449)
319 PLN02760 4-aminobutyrate:pyruv 99.4 3.6E-10 7.9E-15 116.5 32.3 346 82-466 88-492 (504)
320 PRK07030 adenosylmethionine--8 99.4 3.9E-10 8.5E-15 115.4 32.1 343 82-466 46-447 (466)
321 PRK04013 argD acetylornithine/ 99.4 6.5E-11 1.4E-15 117.2 25.6 319 82-466 23-361 (364)
322 PRK15400 lysine decarboxylase 99.4 2E-11 4.4E-16 127.9 22.3 176 124-319 193-380 (714)
323 KOG1359 Glycine C-acetyltransf 99.4 6.4E-11 1.4E-15 108.0 22.2 316 83-465 67-412 (417)
324 PRK09221 beta alanine--pyruvat 99.4 5.1E-10 1.1E-14 114.1 31.6 343 82-466 48-444 (445)
325 PRK07678 aminotransferase; Val 99.4 6.4E-10 1.4E-14 113.7 31.8 343 82-467 46-451 (451)
326 PRK08742 adenosylmethionine--8 99.4 1.1E-09 2.4E-14 112.2 33.2 347 82-466 63-468 (472)
327 PRK06916 adenosylmethionine--8 99.4 8.9E-10 1.9E-14 112.8 32.5 345 82-466 55-456 (460)
328 PRK06105 aminotransferase; Pro 99.4 8E-10 1.7E-14 113.2 32.1 341 82-466 47-450 (460)
329 PRK06917 hypothetical protein; 99.4 6.9E-10 1.5E-14 113.2 31.2 338 82-466 30-438 (447)
330 PRK07036 hypothetical protein; 99.4 1.1E-09 2.3E-14 112.4 32.4 343 82-466 50-453 (466)
331 PRK05630 adenosylmethionine--8 99.4 9.9E-10 2.2E-14 111.2 31.8 334 82-465 39-420 (422)
332 PRK13578 ornithine decarboxyla 99.4 9E-11 2E-15 123.2 24.8 178 124-319 172-368 (720)
333 PLN02880 tyrosine decarboxylas 99.4 1.2E-09 2.6E-14 112.4 32.4 330 103-466 96-485 (490)
334 PRK12403 putative aminotransfe 99.4 1.5E-09 3.3E-14 111.1 32.6 344 82-466 53-453 (460)
335 PRK06209 glutamate-1-semialdeh 99.4 5.3E-10 1.1E-14 113.8 28.8 328 82-466 47-406 (431)
336 PLN02452 phosphoserine transam 99.4 4.8E-10 1E-14 110.9 27.3 326 83-465 6-363 (365)
337 PLN02263 serine decarboxylase 99.4 7.6E-10 1.6E-14 111.3 28.7 300 127-464 130-442 (470)
338 KOG1360 5-aminolevulinate synt 99.4 1.6E-09 3.4E-14 102.9 28.8 311 103-466 187-525 (570)
339 TIGR01365 serC_2 phosphoserine 99.4 5.7E-10 1.2E-14 110.4 27.4 265 157-465 64-373 (374)
340 PRK08297 L-lysine aminotransfe 99.4 1.3E-09 2.8E-14 111.1 30.8 340 82-466 44-442 (443)
341 PLN02590 probable tyrosine dec 99.4 2.6E-09 5.7E-14 110.2 32.6 338 103-466 144-533 (539)
342 PRK06938 diaminobutyrate--2-ox 99.3 5.5E-09 1.2E-13 107.0 34.1 340 82-466 62-461 (464)
343 PRK15399 lysine decarboxylase 99.3 3.5E-10 7.6E-15 118.7 25.6 178 124-321 193-382 (713)
344 PRK06149 hypothetical protein; 99.3 1.3E-09 2.9E-14 121.1 31.0 336 82-465 584-970 (972)
345 PRK07483 hypothetical protein; 99.3 3E-09 6.5E-14 108.4 30.6 340 82-466 29-438 (443)
346 PRK06148 hypothetical protein; 99.3 2.7E-09 5.9E-14 118.8 31.9 337 82-466 623-1011(1013)
347 PRK06931 diaminobutyrate--2-ox 99.3 9.9E-09 2.1E-13 105.1 33.6 341 82-466 57-455 (459)
348 PRK07480 putative aminotransfe 99.3 4.1E-09 8.9E-14 107.8 29.8 343 82-466 49-449 (456)
349 COG0076 GadB Glutamate decarbo 99.3 1.8E-09 4E-14 109.4 24.3 278 100-417 72-377 (460)
350 PRK12462 phosphoserine aminotr 99.2 1.1E-08 2.4E-13 100.3 26.8 323 85-465 5-362 (364)
351 COG1982 LdcC Arginine/lysine/o 99.2 4.4E-09 9.6E-14 106.3 23.4 172 125-320 69-246 (557)
352 TIGR03799 NOD_PanD_pyr putativ 99.2 3E-08 6.5E-13 102.5 30.1 203 110-328 110-354 (522)
353 TIGR00461 gcvP glycine dehydro 99.2 2.6E-08 5.7E-13 107.5 29.7 307 120-465 517-867 (939)
354 TIGR03251 LAT_fam L-lysine 6-t 99.2 5.3E-08 1.1E-12 99.2 29.9 336 82-461 37-430 (431)
355 TIGR00699 GABAtrns_euk 4-amino 99.2 6.8E-08 1.5E-12 98.4 30.1 337 82-463 57-464 (464)
356 KOG1357 Serine palmitoyltransf 99.2 2.2E-09 4.8E-14 103.7 17.6 326 84-463 137-500 (519)
357 COG0161 BioA Adenosylmethionin 99.1 5E-08 1.1E-12 96.8 27.3 343 82-465 43-443 (449)
358 TIGR02617 tnaA_trp_ase tryptop 99.1 3.8E-08 8.2E-13 97.3 25.5 319 103-465 56-441 (467)
359 PRK05367 glycine dehydrogenase 99.1 3.7E-08 8E-13 108.1 27.4 298 126-465 538-875 (954)
360 PRK12566 glycine dehydrogenase 99.1 5.1E-08 1.1E-12 104.8 27.3 171 120-309 530-709 (954)
361 KOG1401 Acetylornithine aminot 99.1 2.3E-07 5E-12 89.1 28.9 340 82-467 55-432 (433)
362 PF06838 Met_gamma_lyase: Meth 99.1 2.2E-08 4.8E-13 95.1 20.4 194 104-328 27-244 (403)
363 PF00202 Aminotran_3: Aminotra 99.0 4E-08 8.6E-13 96.9 19.0 245 82-364 15-290 (339)
364 PLN02994 1-aminocyclopropane-1 99.0 8.2E-10 1.8E-14 95.0 6.2 66 120-189 86-153 (153)
365 PF00282 Pyridoxal_deC: Pyrido 99.0 1.4E-07 2.9E-12 94.0 22.8 209 103-327 53-282 (373)
366 PRK05367 glycine dehydrogenase 99.0 2.9E-07 6.4E-12 101.1 26.8 314 86-460 79-437 (954)
367 KOG1404 Alanine-glyoxylate ami 98.9 8.1E-07 1.7E-11 84.9 24.5 333 82-459 49-432 (442)
368 PLN02974 adenosylmethionine-8- 98.9 3.3E-06 7.1E-11 91.4 31.6 344 84-463 366-816 (817)
369 PLN02414 glycine dehydrogenase 98.8 2.9E-06 6.4E-11 93.1 26.3 317 87-461 107-465 (993)
370 COG3033 TnaA Tryptophanase [Am 98.7 1.2E-05 2.7E-10 76.1 23.9 310 120-465 73-444 (471)
371 COG1921 SelA Selenocysteine sy 98.7 4.9E-06 1.1E-10 81.0 21.6 215 84-328 21-242 (395)
372 KOG2467 Glycine/serine hydroxy 98.6 1E-05 2.2E-10 76.7 22.1 342 84-464 41-425 (477)
373 TIGR03811 tyr_de_CO2_Ent tyros 98.6 5E-05 1.1E-09 79.7 29.7 166 103-275 96-326 (608)
374 PF05889 SLA_LP_auto_ag: Solub 98.6 7.2E-06 1.6E-10 79.8 21.0 261 176-464 100-389 (389)
375 COG4100 Cystathionine beta-lya 98.6 2.4E-06 5.3E-11 78.8 16.2 172 125-328 64-255 (416)
376 KOG1383 Glutamate decarboxylas 98.6 2E-05 4.4E-10 77.2 22.1 276 157-466 144-447 (491)
377 COG1003 GcvP Glycine cleavage 98.5 7.9E-05 1.7E-09 72.6 24.2 139 120-271 96-243 (496)
378 KOG1402 Ornithine aminotransfe 98.5 5.2E-05 1.1E-09 71.1 21.1 308 103-464 77-426 (427)
379 KOG1358 Serine palmitoyltransf 98.5 7.4E-06 1.6E-10 78.4 15.9 329 82-466 93-466 (467)
380 COG3844 Kynureninase [Amino ac 98.4 5.4E-05 1.2E-09 71.0 20.3 292 131-466 81-403 (407)
381 PF03841 SelA: L-seryl-tRNA se 98.2 2.3E-06 5.1E-11 82.5 6.8 200 100-328 16-232 (367)
382 TIGR00461 gcvP glycine dehydro 98.2 0.00041 8.8E-09 75.7 24.3 313 86-460 67-426 (939)
383 KOG1403 Predicted alanine-glyo 98.1 0.00023 4.9E-09 66.0 17.1 279 151-465 104-437 (452)
384 COG1932 SerC Phosphoserine ami 98.1 0.0011 2.4E-08 63.7 21.8 292 128-466 52-364 (365)
385 PF02347 GDC-P: Glycine cleava 98.0 0.0027 5.9E-08 63.5 23.9 318 84-459 66-429 (429)
386 COG0403 GcvP Glycine cleavage 97.7 0.036 7.8E-07 54.5 25.6 321 87-462 79-447 (450)
387 KOG0628 Aromatic-L-amino-acid/ 97.7 0.00086 1.9E-08 65.9 14.3 151 120-278 103-281 (511)
388 KOG0629 Glutamate decarboxylas 97.5 0.013 2.7E-07 57.4 18.3 87 182-273 202-294 (510)
389 KOG3843 Predicted serine hydro 97.4 0.0029 6.3E-08 57.8 12.2 181 194-400 120-301 (432)
390 KOG1405 4-aminobutyrate aminot 97.3 0.013 2.7E-07 56.0 15.3 212 215-466 254-484 (484)
391 PRK12566 glycine dehydrogenase 97.0 0.44 9.5E-06 52.6 25.8 147 84-266 80-241 (954)
392 PLN02672 methionine S-methyltr 96.5 0.061 1.3E-06 60.2 15.3 219 107-358 407-640 (1082)
393 KOG2790 Phosphoserine aminotra 94.9 1.4 3E-05 41.3 14.7 322 83-465 6-368 (370)
394 KOG2040 Glycine dehydrogenase 94.9 0.33 7.2E-06 50.3 11.6 142 120-271 569-719 (1001)
395 COG1648 CysG Siroheme synthase 88.6 19 0.00041 32.8 14.3 93 149-270 12-106 (210)
396 TIGR01470 cysG_Nterm siroheme 79.7 30 0.00065 31.3 11.2 94 149-270 9-103 (205)
397 KOG3846 L-kynurenine hydrolase 78.3 66 0.0014 30.9 24.0 156 103-271 80-253 (465)
398 cd06568 GH20_SpHex_like A subg 72.4 8.8 0.00019 37.6 6.1 69 191-266 24-92 (329)
399 cd02742 GH20_hexosaminidase Be 70.0 12 0.00025 36.3 6.3 68 191-266 22-89 (303)
400 PF05368 NmrA: NmrA-like famil 69.5 51 0.0011 30.1 10.3 92 159-267 7-99 (233)
401 COG2102 Predicted ATPases of P 68.1 69 0.0015 29.3 10.1 123 157-301 7-143 (223)
402 cd06562 GH20_HexA_HexB-like Be 66.7 12 0.00026 37.0 5.7 64 191-266 24-87 (348)
403 PF10087 DUF2325: Uncharacteri 64.5 64 0.0014 25.0 8.5 70 186-267 11-80 (97)
404 cd06570 GH20_chitobiase-like_1 64.0 14 0.00031 35.9 5.5 62 191-266 24-85 (311)
405 PF02662 FlpD: Methyl-viologen 61.9 21 0.00045 29.5 5.4 59 199-262 29-90 (124)
406 COG1105 FruK Fructose-1-phosph 60.8 1.4E+02 0.003 28.9 11.4 55 213-270 110-167 (310)
407 PF14258 DUF4350: Domain of un 60.7 28 0.00061 25.1 5.4 23 246-268 47-70 (70)
408 PRK05562 precorrin-2 dehydroge 59.0 1.5E+02 0.0032 27.3 11.6 93 150-270 26-119 (223)
409 TIGR03815 CpaE_hom_Actino heli 58.0 1.4E+02 0.0029 29.1 11.4 133 127-270 74-213 (322)
410 cd06569 GH20_Sm-chitobiase-lik 56.6 29 0.00064 35.6 6.5 76 191-266 28-114 (445)
411 cd06563 GH20_chitobiase-like T 55.3 31 0.00067 34.2 6.4 75 192-266 25-103 (357)
412 KOG2040 Glycine dehydrogenase 54.4 3.1E+02 0.0066 29.5 24.0 141 102-267 132-281 (1001)
413 COG0296 GlgB 1,4-alpha-glucan 53.7 21 0.00045 38.0 5.0 37 241-277 206-242 (628)
414 COG0816 Predicted endonuclease 51.5 41 0.00088 28.4 5.5 55 214-270 40-97 (141)
415 PF00728 Glyco_hydro_20: Glyco 51.3 15 0.00033 36.1 3.5 67 191-266 24-90 (351)
416 PF02310 B12-binding: B12 bind 50.8 48 0.001 26.6 5.9 67 191-270 21-89 (121)
417 PRK02261 methylaspartate mutas 50.6 89 0.0019 26.2 7.5 57 192-261 25-81 (137)
418 PLN02955 8-amino-7-oxononanoat 49.9 3.2E+02 0.0069 28.4 14.4 159 120-301 110-286 (476)
419 KOG2741 Dimeric dihydrodiol de 48.4 62 0.0013 31.6 6.8 76 185-274 59-134 (351)
420 cd02067 B12-binding B12 bindin 47.9 95 0.0021 24.9 7.2 59 191-262 20-78 (119)
421 TIGR02012 tigrfam_recA protein 47.8 1E+02 0.0022 30.1 8.3 21 426-446 271-291 (321)
422 cd02071 MM_CoA_mut_B12_BD meth 47.0 89 0.0019 25.4 6.9 57 192-261 21-77 (122)
423 PF01408 GFO_IDH_MocA: Oxidore 46.6 65 0.0014 25.7 6.1 21 247-267 98-118 (120)
424 KOG1465 Translation initiation 46.4 2.8E+02 0.006 26.7 10.5 107 149-272 162-274 (353)
425 PRK04302 triosephosphate isome 44.8 2.3E+02 0.0049 25.9 10.0 22 246-267 98-119 (223)
426 PRK09354 recA recombinase A; P 44.8 1.4E+02 0.003 29.6 8.8 58 149-206 59-117 (349)
427 smart00642 Aamy Alpha-amylase 44.5 33 0.00072 29.9 4.1 28 247-274 68-95 (166)
428 PF03652 UPF0081: Uncharacteri 43.5 96 0.0021 25.9 6.6 61 211-273 35-99 (135)
429 TIGR01501 MthylAspMutase methy 42.7 97 0.0021 25.9 6.4 60 191-263 22-81 (134)
430 PRK05678 succinyl-CoA syntheta 42.6 1.3E+02 0.0029 28.9 8.2 47 215-270 78-124 (291)
431 cd02072 Glm_B12_BD B12 binding 42.2 1E+02 0.0023 25.5 6.4 59 192-263 21-79 (128)
432 PF05687 DUF822: Plant protein 42.0 1.1E+02 0.0023 25.9 6.3 19 422-440 48-66 (150)
433 PRK10637 cysG siroheme synthas 41.6 4.1E+02 0.0089 27.3 16.3 95 148-270 11-106 (457)
434 KOG1209 1-Acyl dihydroxyaceton 41.5 1.5E+02 0.0033 27.1 7.6 86 149-241 7-92 (289)
435 COG0065 LeuC 3-isopropylmalate 41.2 43 0.00094 33.2 4.6 75 230-309 57-131 (423)
436 TIGR00290 MJ0570_dom MJ0570-re 41.0 2.7E+02 0.0059 25.5 9.6 123 157-301 7-142 (223)
437 PF13241 NAD_binding_7: Putati 40.6 1.1E+02 0.0023 24.1 6.2 84 149-267 7-90 (103)
438 PRK11889 flhF flagellar biosyn 40.2 4.2E+02 0.009 27.0 11.7 106 152-270 243-361 (436)
439 cd00983 recA RecA is a bacter 40.1 1.5E+02 0.0033 28.9 8.3 52 150-201 55-107 (325)
440 PF13460 NAD_binding_10: NADH( 39.8 1.3E+02 0.0029 25.9 7.4 87 158-263 4-90 (183)
441 PF04413 Glycos_transf_N: 3-De 39.7 2.7E+02 0.0058 24.6 10.1 98 151-268 22-124 (186)
442 PRK11865 pyruvate ferredoxin o 39.2 2.2E+02 0.0049 27.4 9.1 71 191-268 168-240 (299)
443 cd02070 corrinoid_protein_B12- 39.0 2.9E+02 0.0062 24.7 11.6 73 177-262 82-161 (201)
444 TIGR00289 conserved hypothetic 38.6 3.2E+02 0.0068 25.1 13.8 125 157-304 7-144 (222)
445 PRK09189 uroporphyrinogen-III 38.3 2.5E+02 0.0054 25.8 9.3 67 170-238 111-179 (240)
446 KOG1201 Hydroxysteroid 17-beta 38.3 3.7E+02 0.0081 25.9 11.8 104 146-257 35-144 (300)
447 TIGR00640 acid_CoA_mut_C methy 38.0 1.3E+02 0.0029 24.9 6.6 59 191-262 23-81 (132)
448 TIGR00064 ftsY signal recognit 37.7 3.5E+02 0.0077 25.6 10.3 40 230-270 156-201 (272)
449 COG1519 KdtA 3-deoxy-D-manno-o 37.6 4.5E+02 0.0098 26.6 11.8 123 129-270 28-154 (419)
450 TIGR03573 WbuX N-acetyl sugar 36.5 4.3E+02 0.0092 26.0 12.6 121 126-270 40-168 (343)
451 PRK05703 flhF flagellar biosyn 36.4 4E+02 0.0087 27.1 11.0 130 129-271 200-342 (424)
452 PRK04296 thymidine kinase; Pro 36.3 3E+02 0.0066 24.3 12.5 112 175-302 28-142 (190)
453 TIGR02026 BchE magnesium-proto 36.0 1.9E+02 0.0041 30.2 8.9 68 193-271 31-101 (497)
454 TIGR02370 pyl_corrinoid methyl 35.4 3.3E+02 0.0071 24.3 11.1 72 178-262 85-163 (197)
455 COG0156 BioF 7-keto-8-aminopel 35.1 4.8E+02 0.01 26.2 15.9 133 119-273 46-183 (388)
456 COG4221 Short-chain alcohol de 34.6 3.9E+02 0.0084 25.0 10.3 149 151-328 7-162 (246)
457 PLN03244 alpha-amylase; Provis 34.3 70 0.0015 35.1 5.2 42 236-277 428-469 (872)
458 TIGR02104 pulA_typeI pullulana 34.2 49 0.0011 35.5 4.3 36 237-275 220-255 (605)
459 TIGR02083 LEU2 3-isopropylmala 34.1 1.5E+02 0.0033 30.0 7.3 74 231-309 57-130 (419)
460 PRK06483 dihydromonapterin red 33.7 3.3E+02 0.0072 24.5 9.4 90 158-255 8-102 (236)
461 PRK05234 mgsA methylglyoxal sy 33.6 2.2E+02 0.0048 24.0 7.3 71 191-269 42-113 (142)
462 cd01422 MGS Methylglyoxal synt 33.5 2.5E+02 0.0054 22.6 7.4 67 193-267 39-106 (115)
463 cd06449 ACCD Aminocyclopropane 33.1 2.1E+02 0.0046 27.5 8.2 17 190-206 100-116 (307)
464 PRK06500 short chain dehydroge 33.1 3.4E+02 0.0074 24.5 9.4 48 158-206 12-59 (249)
465 COG2102 Predicted ATPases of P 33.0 2.1E+02 0.0045 26.2 7.3 71 190-266 104-177 (223)
466 PRK08265 short chain dehydroge 33.0 3.3E+02 0.0071 25.1 9.3 93 158-256 12-108 (261)
467 cd01078 NAD_bind_H4MPT_DH NADP 33.0 3E+02 0.0065 24.2 8.6 107 144-274 23-133 (194)
468 PRK04147 N-acetylneuraminate l 32.9 2.4E+02 0.0052 27.0 8.5 106 190-315 91-201 (293)
469 TIGR00683 nanA N-acetylneurami 32.9 2.8E+02 0.0061 26.5 8.9 28 239-269 135-164 (290)
470 cd01840 SGNH_hydrolase_yrhL_li 32.5 2.6E+02 0.0057 23.4 7.8 50 216-268 66-115 (150)
471 PRK14723 flhF flagellar biosyn 32.3 7.3E+02 0.016 27.5 12.6 132 128-272 161-306 (767)
472 KOG0622 Ornithine decarboxylas 32.0 3.9E+02 0.0084 27.0 9.4 81 176-266 122-210 (448)
473 TIGR02402 trehalose_TreZ malto 32.0 80 0.0017 33.4 5.3 31 245-275 156-186 (542)
474 PF04412 DUF521: Protein of un 31.8 1E+02 0.0022 31.0 5.8 44 213-262 269-316 (400)
475 COG1875 NYN ribonuclease and A 31.7 1.5E+02 0.0032 29.5 6.5 29 160-188 257-287 (436)
476 PF00128 Alpha-amylase: Alpha 31.1 38 0.00083 32.2 2.6 30 247-276 50-79 (316)
477 PF03786 UxuA: D-mannonate deh 30.6 93 0.002 30.7 5.1 51 215-267 13-63 (351)
478 cd06564 GH20_DspB_LnbB-like Gl 30.4 54 0.0012 32.1 3.5 26 241-266 74-99 (326)
479 PLN02970 serine racemase 30.4 2.1E+02 0.0045 28.0 7.7 53 151-206 77-129 (328)
480 KOG1467 Translation initiation 30.4 4.6E+02 0.01 27.1 9.8 108 147-271 357-471 (556)
481 COG0031 CysK Cysteine synthase 30.1 2.6E+02 0.0057 26.9 7.9 56 147-206 59-116 (300)
482 COG0157 NadC Nicotinate-nucleo 29.7 3.7E+02 0.0081 25.5 8.6 123 157-306 130-268 (280)
483 PF08672 APC2: Anaphase promot 29.5 46 0.00099 23.5 2.1 35 238-272 25-59 (60)
484 TIGR01019 sucCoAalpha succinyl 29.4 3.4E+02 0.0074 26.0 8.7 47 215-270 76-122 (286)
485 cd02069 methionine_synthase_B1 29.0 2.3E+02 0.0049 25.8 7.1 72 178-262 89-167 (213)
486 PRK11864 2-ketoisovalerate fer 28.9 3.9E+02 0.0084 25.8 8.9 70 191-267 164-235 (300)
487 TIGR01343 hacA_fam homoaconita 28.7 2.4E+02 0.0053 28.5 7.8 72 231-309 55-127 (412)
488 cd01585 AcnA_Bact Aconitase ca 28.5 3E+02 0.0065 27.6 8.3 71 232-310 30-100 (380)
489 PF02571 CbiJ: Precorrin-6x re 28.0 3.7E+02 0.008 25.1 8.5 95 151-266 2-97 (249)
490 PRK06988 putative formyltransf 28.0 3.2E+02 0.007 26.4 8.4 88 214-317 13-104 (312)
491 PF01008 IF-2B: Initiation fac 27.9 3.1E+02 0.0068 25.9 8.3 119 130-268 92-216 (282)
492 PRK06718 precorrin-2 dehydroge 27.8 4.5E+02 0.0097 23.6 10.3 38 148-190 9-46 (202)
493 PRK08057 cobalt-precorrin-6x r 27.8 5.1E+02 0.011 24.2 9.5 92 151-267 4-97 (248)
494 COG0505 CarA Carbamoylphosphat 27.7 1E+02 0.0023 30.2 4.8 57 177-244 179-236 (368)
495 PRK08638 threonine dehydratase 27.5 2.1E+02 0.0045 28.1 7.1 52 151-205 77-128 (333)
496 TIGR01761 thiaz-red thiazoliny 27.4 3.3E+02 0.0071 26.9 8.4 69 186-267 52-120 (343)
497 PRK12936 3-ketoacyl-(acyl-carr 27.3 4.6E+02 0.0099 23.5 9.2 95 151-254 8-107 (245)
498 TIGR00649 MG423 conserved hypo 27.2 5.7E+02 0.012 25.9 10.5 74 176-263 318-401 (422)
499 cd00758 MoCF_BD MoCF_BD: molyb 26.9 1.5E+02 0.0034 24.4 5.3 59 190-253 24-82 (133)
500 PLN02960 alpha-amylase 26.9 1E+02 0.0022 34.3 5.1 37 241-277 458-494 (897)
No 1
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=5e-68 Score=496.33 Aligned_cols=395 Identities=53% Similarity=0.915 Sum_probs=380.6
Q ss_pred ccCCCCCCCCcccchHHHhhcCCCCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHH
Q 012238 59 FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAEL 138 (467)
Q Consensus 59 ~~~~~~~~~~~i~~~~~~~~~~~~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~ 138 (467)
|++++..|+++|+++.+.+++++++++|||++|.|+|+.+.+++.+.|++|.+...+......|.|..|+++++++++++
T Consensus 2 F~~i~~~p~DpIlgL~e~f~~D~R~~KVNLgIGvY~de~Gk~pvl~aV~~Ae~~l~~~~~~k~Yl~i~G~~~f~~~~~~l 81 (396)
T COG1448 2 FEKIEAAPADPILGLKEAFKADPRPNKVNLGIGVYKDEDGKTPVLRAVKKAEKRLLEQEKTKNYLPIEGLPEFLEAVQKL 81 (396)
T ss_pred ccccccCCCCchhHHHHHHhcCCCcCeeeeeeeeeeCCCCCcchhHHHHHHHHHhhccccccccCCcCCcHHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999998777779999999999999999999
Q ss_pred HhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhh
Q 012238 139 LFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEG 218 (467)
Q Consensus 139 l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~ 218 (467)
+++.+...++++++..+||.|||||+.+++.+++...|..+|++++|+|++|..+++..|.++..||+++.++.++|++.
T Consensus 82 lFG~d~~~l~~~Rv~t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~If~~aGl~v~~Y~Yyd~~~~~~df~~ 161 (396)
T COG1448 82 LFGADSPALAEDRVATVQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHKAIFEAAGLEVETYPYYDAETKGLDFDG 161 (396)
T ss_pred hcCCCcHHHHhhhHhheecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHHHHHHhcCCceeeeeccccccccccHHH
Confidence 99988788889999999999999999999999999999889999999999999999999999999999988888999999
Q ss_pred HHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEE
Q 012238 219 MIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV 298 (467)
Q Consensus 219 l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~ 298 (467)
+.+.+++.+.+..++++.++|||||..++.++|.+|+++.++.+++.++|-+|++|..| ++.|...++.++.....+++
T Consensus 162 mla~L~~a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~G-leeDa~~lR~~a~~~~~~lv 240 (396)
T COG1448 162 MLADLKTAPEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADG-LEEDAYALRLFAEVGPELLV 240 (396)
T ss_pred HHHHHHhCCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccc-hHHHHHHHHHHHHhCCcEEE
Confidence 99999999999999999999999999999999999999999999999999999999988 88999999999998888999
Q ss_pred EecCccCcccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHH
Q 012238 299 AQSYSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEME 378 (467)
Q Consensus 299 ~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~ 378 (467)
..||||+||++|.|+|++.+|+.+++.+.+ +.+|++...+..|++||.++..+++.+|++++++.+|++++.
T Consensus 241 a~S~SKnfgLYgERVGa~~vva~~~~~a~~--------v~sqlk~~iR~~ySnPP~~Ga~vva~IL~~p~Lra~W~~El~ 312 (396)
T COG1448 241 ASSFSKNFGLYGERVGALSVVAEDAEEADR--------VLSQLKAIIRTNYSNPPAHGAAVVATILNNPELRAEWEQELE 312 (396)
T ss_pred EehhhhhhhhhhhccceeEEEeCCHHHHHH--------HHHHHHHHHHhccCCCchhhHHHHHHHhCCHHHHHHHHHHHH
Confidence 999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceEEecCCCHHHHHHHHHcccEEEeCCCeEEeccCChhhHHHHHHH
Q 012238 379 MMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADA 458 (467)
Q Consensus 379 ~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~~~g~f~~~~l~~~~~~~ll~~~gI~v~~ggRis~~~~~~~~i~~~~~~ 458 (467)
.|++|+.++|..|++.|+ ..+.+.+|+++..+.|||.+.|++++++.+|.+++||+++.+||||++++++.++++++++
T Consensus 313 ~Mr~Ri~~mR~~lv~~L~-~~~~~~~f~~i~~Q~GMFsy~Gls~~QV~rLree~~IY~v~sGRi~vaGl~~~ni~~va~a 391 (396)
T COG1448 313 EMRQRILEMRQALVDALK-ALGAPRNFDFIISQRGMFSYTGLSPEQVDRLREEFGIYLVASGRINVAGLNTSNIDYVAKA 391 (396)
T ss_pred HHHHHHHHHHHHHHHHHH-hhCCCcccchHhhcCceeecCCCCHHHHHHHHHhccEEEecCCeeeeccCChhhHHHHHHH
Confidence 999999999999999999 8877778999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHH
Q 012238 459 IIDSY 463 (467)
Q Consensus 459 l~~~l 463 (467)
|.+++
T Consensus 392 i~~v~ 396 (396)
T COG1448 392 IAAVL 396 (396)
T ss_pred HHhhC
Confidence 98763
No 2
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=100.00 E-value=1.6e-66 Score=475.31 Aligned_cols=409 Identities=59% Similarity=1.000 Sum_probs=393.5
Q ss_pred cchhhcccccccCCCCCCCCcccchHHHhhcCCCCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcch
Q 012238 49 SMVAAVNVSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGL 128 (467)
Q Consensus 49 ~~~~~~~~s~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~ 128 (467)
+++.....|++++|+++|||||+++.+++++|+++.+|||++|.|+|+++.|++.+.|++|.++.+....+.+|.|+.|+
T Consensus 18 a~~~~~~~s~~s~V~maPpDpILGVTeAfk~D~n~~KiNLgvGaYRdd~gKp~vL~~VrkAE~ql~~~~ldKEYlpI~Gl 97 (427)
T KOG1411|consen 18 AAASARASSWWSHVEMAPPDPILGVTEAFKKDPNPKKINLGVGAYRDDNGKPYVLPSVRKAEQQLASLSLDKEYLPITGL 97 (427)
T ss_pred hhhcccccchhhcCCCCCCCCcccHHHHHhcCCCcceeeecccceecCCCCeeeeHHHHHHHHHHhhhcccchhccccch
Confidence 34444445799999999999999999999999999999999999999999999999999999999887778999999999
Q ss_pred HHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeec
Q 012238 129 AAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYD 208 (467)
Q Consensus 129 ~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~ 208 (467)
++|.+..+++..+.....+..++|+.+|+.+||+|+.+.+.|++.+.++..|.+|+|+|.++.++++.+|+.+..|.+++
T Consensus 98 ~eF~k~sakLa~G~~s~~ik~~Ri~tvQ~lSGTGaLriga~Fl~~f~~~~~I~ip~PTWgNh~~if~~ag~~~~~yrYyd 177 (427)
T KOG1411|consen 98 AEFNKLSAKLALGDNSPVIKEKRIVTVQTLSGTGALRVGAEFLARFYPSRDIYIPDPTWGNHKNIFKDAGLPVKFYRYYD 177 (427)
T ss_pred HHHHHHHHHHhhcCCchhhhccceeEEEeccCcchhhHHHHHHHhhccccceeecCCcccccCccccccCcceeeeeecc
Confidence 99999999999999889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHH
Q 012238 209 PKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRL 288 (467)
Q Consensus 209 ~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~ 288 (467)
+.+.++|++.+.+.+.+.+++..++++.+.|||||+..+.|+|++|.++.++++.+.++|.+|++|..++.+.|+..++.
T Consensus 178 ~~t~gld~~g~ledl~~~p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~ 257 (427)
T KOG1411|consen 178 PKTRGLDFKGMLEDLGEAPEGSIILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRL 257 (427)
T ss_pred ccccccchHHHHHHHhcCCCCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhhcccccCCchhhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCeEEEEecCccCcccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChh
Q 012238 289 FATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPA 368 (467)
Q Consensus 289 ~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~ 368 (467)
|++.+.++++++||.|++|+.|.|+|.+.+||.+++...+ +.+|++.+.++++++||.++++++..+|++++
T Consensus 258 F~~~g~~~~laQSyAKNMGLYgERvGa~svvc~~ad~A~r--------V~SQlk~liRpmYSnPP~hGArIv~~Il~d~~ 329 (427)
T KOG1411|consen 258 FVEDGHEILLAQSYAKNMGLYGERVGALSVVCKDADEAKR--------VESQLKILIRPMYSNPPLHGARIVATILSDPD 329 (427)
T ss_pred HHHcCCceEeehhhhhhcchhhhccceeEEEecCHHHHHH--------HHHHHHHHhcccccCCCccchhhhhhccCChH
Confidence 9999999999999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceEEecCCCHHHHHHHHHcccEEEeCCCeEEeccCC
Q 012238 369 LFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKDGRISLAGLS 448 (467)
Q Consensus 369 ~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~~~g~f~~~~l~~~~~~~ll~~~gI~v~~ggRis~~~~~ 448 (467)
++.+|..++..+..|+..+|+.|.+.|+ ..|.+++|+++..+-|||+|.++++++++.|.++++|+++..||||+++++
T Consensus 330 l~~~W~~evk~MadRi~~mR~~L~d~L~-~~gs~~~W~hI~~QIGMF~fTgl~peQv~~l~ke~~iYmT~dGRiS~aG~s 408 (427)
T KOG1411|consen 330 LKNQWLGEVKGMADRIISMRQQLFDALE-KEGSPGNWSHITKQIGMFCFTGLNPEQVDWLTKEYHIYLTKDGRISMAGLS 408 (427)
T ss_pred HHHHHHHHHHHHHHhhhhhHHHHhHHhh-cCCCCccHHHHHHhhheeeecCCCHHHHHHHHhhheeeeccCceEeecccc
Confidence 9999999999999999999999999999 888888999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHhc
Q 012238 449 LAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 449 ~~~i~~~~~~l~~~l~~~ 466 (467)
..++.++.++|.++.+..
T Consensus 409 s~nV~yLa~aih~vtk~~ 426 (427)
T KOG1411|consen 409 SSNVPYLADAIHAVTKNT 426 (427)
T ss_pred ccCCcccchhhHhHhcCC
Confidence 999999999999887653
No 3
>PLN02397 aspartate transaminase
Probab=100.00 E-value=2.4e-61 Score=488.53 Aligned_cols=422 Identities=64% Similarity=1.064 Sum_probs=355.2
Q ss_pred ccccccccccCcccchhhcccccccCCCCCCCCcccchHHHhhcCCCCCcEEecCcccCCCCCCCCchHHHHHHHHHHHh
Q 012238 36 TAGFIKTKSFGRVSMVAAVNVSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLE 115 (467)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~ 115 (467)
+|||.+.+++++-+|+.+...|+|+++...+.++|..+.+.++.+..+.+|+|+.|.+.|+.++|.+.+.+.++...++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~l~~g~~p~~~~~p~~~~~~~~a~~~~~~ 80 (423)
T PLN02397 1 SNPFLKAKSRSRSSMAAAAASSRFEHVEPAPPDPILGVTEAFLADPSPVKLNLGVGAYRTEEGKPVVLNVVRKAEQRLLA 80 (423)
T ss_pred CCcccccccccccchhhhhhhhHHHcCCcCCCChHHHHHHHHhhCCCcceEecccceeeCCCCCcccchHHHHHHHHhhc
Confidence 47999999999999999888889999999999999999988887777789999999865766666666788888766654
Q ss_pred cCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHh
Q 012238 116 RGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN 195 (467)
Q Consensus 116 ~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~ 195 (467)
.+...+|+|..|.++||+++++++.+.++...++++|..+++.+|+++..++..++..+.|||+|++++|+|+.|..+++
T Consensus 81 ~~~~~~Y~~~~G~~~LR~aia~~~~~~~~~~~~~~~i~~~~i~~g~Ga~~l~~~~~~~~~pGd~Vlv~~P~y~~y~~~~~ 160 (423)
T PLN02397 81 GSRNKEYLPIEGLAEFNKLSAKLAYGADSPAIKENRVATVQCLSGTGSLRLGAEFLARFYPGSTIYIPNPTWGNHHNIFR 160 (423)
T ss_pred cCCCCCCCCcCCCHHHHHHHHHHHcCCCCchhhcCeeEeeecccchHHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHH
Confidence 44446899999999999999999877655555555665555677777776655566666799999999999999999999
Q ss_pred hCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCC
Q 012238 196 DARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFA 275 (467)
Q Consensus 196 ~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~ 275 (467)
..|++++.+++.+++++++|++.+++.+++..++++++++++||||||.+++.+++++|+++|++||++||+||+|.+|.
T Consensus 161 ~~g~~~~~v~l~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~ 240 (423)
T PLN02397 161 DAGVPVRTYRYYDPKTRGLDFDGLLEDLKAAPDGSFVLLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQGFA 240 (423)
T ss_pred HcCCeEEEeecccCcCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccCCcc
Confidence 99999999998544568899999999887544578999999999999999999999999999999999999999999999
Q ss_pred CCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchH
Q 012238 276 SGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVH 355 (467)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 355 (467)
+++...+..++..+....+++|+++||||+|+++|||+||+++++++++.++. +.+++....+..+.+++.+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~G~RvG~~v~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~ 312 (423)
T PLN02397 241 SGDLDADAQSVRMFVEDGHEILVAQSYAKNMGLYGERVGALSVVCKSADVAVR--------VKSQLKLIARPMYSNPPIH 312 (423)
T ss_pred CCchhhhhHHHHHHHhcCCcEEEEEECcccCCCccccceEEEEEeCCHHHHHH--------HHHHHHHHHhcccCCCcHH
Confidence 85311123344444444567999999999999999999999644567777766 6655766666667778889
Q ss_pred HHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceEEecCCCHHHHHHHHHcccEE
Q 012238 356 GARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVY 435 (467)
Q Consensus 356 ~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~~~g~f~~~~l~~~~~~~ll~~~gI~ 435 (467)
.|.++..+|+++.+.+.|.+++++++++++++|+.+.+.|+ +++.+..|.+..|+||||+|++++.+++++|++++||+
T Consensus 313 ~q~~~~~~L~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~-~~~~~~~~~~~~p~gg~fl~~~l~~~~~~~Ll~~~~V~ 391 (423)
T PLN02397 313 GASIVATILGDPELFSEWTKELKGMADRIISMRQKLYDALE-ARGSPGDWSHITKQIGMFSFTGLNKEQVDRMTKEYHIY 391 (423)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCCCCCCcccCCceEEEecCCCHHHHHHHHHhCCEE
Confidence 99999999999887778877789999999999999999999 87754457778899999999999988999999999999
Q ss_pred EeCCCeEEeccCChhhHHHHHHHHHHHHHhc
Q 012238 436 MTKDGRISLAGLSLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 436 v~~ggRis~~~~~~~~i~~~~~~l~~~l~~~ 466 (467)
+.++|||++++.+++++++++++|++++++.
T Consensus 392 v~~~~Ri~~~~~~~~~i~~~~~~i~~~~~~~ 422 (423)
T PLN02397 392 MTRDGRISMAGLSSKNVPYLADAIHAVVTNA 422 (423)
T ss_pred ECCCCeEEEeeCCHHHHHHHHHHHHHHHhcc
Confidence 9999999999779999999999999998753
No 4
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=100.00 E-value=4.9e-61 Score=433.42 Aligned_cols=402 Identities=47% Similarity=0.836 Sum_probs=384.3
Q ss_pred cccccCCCCCCCCcccchHHHhhcCCCCCcEEecCcccCCCCCCCCchHHHHHHHHHHHh-cCCCCcCCCCcchHHHHHH
Q 012238 56 VSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLE-RGENKEYLPIEGLAAFNKV 134 (467)
Q Consensus 56 ~s~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~-~~~~~~Y~~~~G~~~lr~a 134 (467)
+|.|+.++.+++..++.+.+.+.++..|.++||++|.|+++++.|++.|.|+++...+.+ ....++|.|..|++.|+++
T Consensus 3 ~s~f~~I~~a~p~~vf~~~~~y~~d~~p~KvnL~igAYRtd~g~PWvLPvVk~~e~~i~~d~s~NHEYLpi~Gl~~F~~~ 82 (410)
T KOG1412|consen 3 MSFFANIPVAPPIEVFKLNASYGEDLDPVKVNLGIGAYRTDDGKPWVLPVVKKAEKKIANDQSLNHEYLPILGLPTFTKA 82 (410)
T ss_pred cchhcCCccCChHHHHhhHHHhcccCCcceeecccceEEcCCCCeeEehhhhhhhhhccCchhccchhccccCchhhhhh
Confidence 578999999999999999999999999999999999999999999999999999888774 3566899999999999999
Q ss_pred HHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCC-CeEEeeeecCCCCC
Q 012238 135 TAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARV-PWSEYRYYDPKTVG 213 (467)
Q Consensus 135 ia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~-~~~~v~~~~~~~~~ 213 (467)
.++.+.+.+...+++++++-||+.+||+|+.+++.+++.+.+..+|.+++|+|.++..+++..|. ++..+++.+.++-+
T Consensus 83 A~el~lg~~s~a~kE~Rv~~vQslsGTGAl~~~A~Fl~~~~~~~~VY~SnPTW~nH~~if~~aGf~tv~~Y~yWd~~~k~ 162 (410)
T KOG1412|consen 83 ATELLLGADSPAIKEDRVFGVQSLSGTGALRIAADFLATFYNKNTVYVSNPTWENHHAIFEKAGFTTVATYPYWDAENKC 162 (410)
T ss_pred hHHHhcCCCchhhhhccccceeeccccchhhhhHHHHHHhcccceeEecCCchhHHHHHHHHcCCceeeeeeeecCCCce
Confidence 99999999999999999999999999999999999999988888999999999999999999994 57788988888889
Q ss_pred CChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcC
Q 012238 214 LDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRG 293 (467)
Q Consensus 214 ~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~ 293 (467)
+|++.+...++.+|++..++++.+.|||||..++.|+|..|+++.++++++.++|-+|++|+.|+++.|.|.++.+++.+
T Consensus 163 ~d~e~~Lsdl~~APe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~g 242 (410)
T KOG1412|consen 163 VDLEGFLSDLESAPEGSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVEQG 242 (410)
T ss_pred ecHHHHHHHHhhCCCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehhhcccccCCccccHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEEEEecCccCcccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHH
Q 012238 294 MELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEW 373 (467)
Q Consensus 294 ~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~ 373 (467)
..++++.||+|++|++|.|+|.+.+|..++..+.. +.+||..+.+..+++||++++.++..+|+.++++++|
T Consensus 243 ~e~fv~QSFaKNfGlYneRvGnltvv~~n~a~i~~--------v~SQl~lviR~~~SNPPAyGArIV~kvL~tP~lre~W 314 (410)
T KOG1412|consen 243 FELFVCQSFAKNFGLYNERVGNLTVVVNNPAVIAG--------VKSQLTLVIRSNWSNPPAYGARIVHKVLSTPELREQW 314 (410)
T ss_pred CeEEEEhhhhhhcccccccccceEEEecChhHHHH--------HHHHHHHHHhhccCCCcchhhHHHHHHhcCHHHHHHH
Confidence 99999999999999999999999999999999888 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceEEecCCCHHHHHHHHHcccEEEeCCCeEEeccCChhhHH
Q 012238 374 KAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCE 453 (467)
Q Consensus 374 ~~~l~~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~~~g~f~~~~l~~~~~~~ll~~~gI~v~~ggRis~~~~~~~~i~ 453 (467)
...+..+..|++++|..|++.|. .++.||.|+.+..+.|||.|.|+++.+++.|.++|+|++.+.|||++++++..+++
T Consensus 315 ~~sik~MssRI~~MR~aLrd~L~-aL~TPGtWDHI~~QiGMFSyTGLtp~qV~~li~~h~vyLl~~GRInisGLN~~Nve 393 (410)
T KOG1412|consen 315 IQSIKTMSSRIKKMRTALRDHLV-ALKTPGTWDHITQQIGMFSYTGLTPAQVDHLIENHKVYLLSDGRINISGLNMKNVE 393 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-hcCCCCcHHHHHhhccceeecCCCHHHHHHHHHhceEEEecCCcEeeeccccccHH
Confidence 99999999999999999999999 99999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhc
Q 012238 454 YLADAIIDSYHNV 466 (467)
Q Consensus 454 ~~~~~l~~~l~~~ 466 (467)
++.++|.+++..+
T Consensus 394 yVAkAIde~Vr~~ 406 (410)
T KOG1412|consen 394 YVAKAIDETVRAI 406 (410)
T ss_pred HHHHHHHHHHHhh
Confidence 9999999998754
No 5
>PTZ00376 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3e-58 Score=464.65 Aligned_cols=399 Identities=56% Similarity=0.980 Sum_probs=327.7
Q ss_pred cccCCCCCCCCcccchHHHhhcCCCCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHH
Q 012238 58 RFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAE 137 (467)
Q Consensus 58 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~ 137 (467)
.++++...+++.+.++.+..+.+.++++|||++|.|.|..+...+.+.+.+++......+...+|.|..|.++||+++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~ 83 (404)
T PTZ00376 4 LFSQVPLGPPDPILGLAAAFKADPSPSKVNLGIGAYRDENGKPYVLESVRKAEKIIAEKNLDKEYLPIEGLQSFIEAAQK 83 (404)
T ss_pred hhhcCCcCCCChHHHHHHHHhhcCCcccEecccceeECCCCCEehhhHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHH
Confidence 46667777778888888877755556899999999744433333356677776655433334789999999999999999
Q ss_pred HHhCCCCcccccCceeeeecCCchhHHHHHHHHH-HHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCCh
Q 012238 138 LLFGADNSVLKEQRVATVQGLSGTGSLRLAAALI-ERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDF 216 (467)
Q Consensus 138 ~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l-~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~ 216 (467)
++.+..+..+++++|++.+|.|+++++.++.+++ ..+.|||+|++++|+|+.|...++..|++++.+|+.+++++++|+
T Consensus 84 ~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~l~~~~~~~~d~ 163 (404)
T PTZ00376 84 LLFGEASYALAEKRIATVQALSGTGALRLGFEFLKRFLPAGTTVYVSNPTWPNHVNIFKSAGLNVKEYRYYDPKTKGLDF 163 (404)
T ss_pred HhcCCCccccccCeEEEeeccCcchHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCceeeccccCcccCCcCH
Confidence 9877766677889998555899999999875444 345699999999999999999999999999999996555689999
Q ss_pred hhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeE
Q 012238 217 EGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMEL 296 (467)
Q Consensus 217 ~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (467)
+.+++.+++..++++++++++||||||.+++.+++++|+++|++||++||+||+|.++.+++.+.+..++..+....+++
T Consensus 164 ~~l~~~~~~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~v 243 (404)
T PTZ00376 164 DGMLEDLRTAPNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAERGVEF 243 (404)
T ss_pred HHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHhcCCcE
Confidence 99999997543457889999999999999999999999999999999999999999999853111222333444445689
Q ss_pred EEEecCccCcccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHH
Q 012238 297 LVAQSYSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAE 376 (467)
Q Consensus 297 i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~ 376 (467)
|+++||||.|++||||+||++++++++++++. +..++.+.....+.+++.+.|.++..+|.++.+.+.|.++
T Consensus 244 i~i~SfSK~~~~~GlRvG~~~~~~~~~~~~~~--------l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~ 315 (404)
T PTZ00376 244 LVAQSFSKNMGLYGERIGALHIVCANKEEAAN--------VLSQLKLIIRPMYSSPPIHGARIADRILSDPELRAEWLSE 315 (404)
T ss_pred EEEEeCCCcccccccccceEEEEeCCHHHHHH--------HHHHHHHHHhhhcCCCchHHHHHHHHHhCCHHHHHHHHHH
Confidence 99999999999999999999644588887776 5555665555556677888999999999988777777777
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceEEecCCCHHHHHHHHHcccEEEeCCCeEEeccCChhhHHHHH
Q 012238 377 MEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLA 456 (467)
Q Consensus 377 l~~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~~~g~f~~~~l~~~~~~~ll~~~gI~v~~ggRis~~~~~~~~i~~~~ 456 (467)
+++.+++++++|+.+.+.|+ +.+.+..|.+..|+||||+|++++.+++++|++++||++.|||||+++.++++++++++
T Consensus 316 ~~~~~~~~~~~r~~l~~~L~-~~~~~~~~~~~~p~gg~f~~~~~~~~~~~~L~~~~~v~v~p~~Ris~~~~~~~~~~~~~ 394 (404)
T PTZ00376 316 LKEMSGRIQNMRQLLYDELK-ALGSPGDWEHIINQIGMFSFTGLTKEQVERLIEKYHIYLLDNGRISVAGLTSKNVDYVA 394 (404)
T ss_pred HHHHHHHHHHHHHHHHHHHH-hcCCCCcccccccCceEEEecCCCHHHHHHHHHhCCEeecCCCeEEEeccCHHhHHHHH
Confidence 88899999999999999999 87655446777899999999999999999999999999999999999877899999999
Q ss_pred HHHHHHHHh
Q 012238 457 DAIIDSYHN 465 (467)
Q Consensus 457 ~~l~~~l~~ 465 (467)
++|++++..
T Consensus 395 ~~l~~~~~~ 403 (404)
T PTZ00376 395 EAIHDVVRN 403 (404)
T ss_pred HHHHHHHhc
Confidence 999999765
No 6
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=100.00 E-value=7.8e-57 Score=453.54 Aligned_cols=393 Identities=50% Similarity=0.870 Sum_probs=322.5
Q ss_pred ccCCCCCCCCcccchHHHhhcCCCCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHH
Q 012238 59 FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAEL 138 (467)
Q Consensus 59 ~~~~~~~~~~~i~~~~~~~~~~~~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~ 138 (467)
|+++...+++.+..+...++.+..+++|||++|.|.+++..++..+.+.+++.+.+..+....|.+..|.++||++++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~ 81 (396)
T PRK09257 2 FEHLEAAPADPILGLMEAFRADPRPDKVNLGVGVYKDEQGRTPVLRAVKKAEARLLETETTKNYLPIEGLAAYRQAVQEL 81 (396)
T ss_pred cccCCCCCCChHHHHHHHHhhCCCcCcEecceeeEECCCCCEeccHHHHHHHHHhcccccCCCcCCCCCCHHHHHHHHHH
Confidence 45666777778877777776554568999999987544333332478899988876544446899999999999999999
Q ss_pred HhCCCCcccccCce--eeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCCh
Q 012238 139 LFGADNSVLKEQRV--ATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDF 216 (467)
Q Consensus 139 l~~~~~~~~~~~~i--~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~ 216 (467)
+.+.++..+++++| ++ |+|+++|+.++.+++..+.|||+|++++|+|+.|..+++..|++++.+|+.+++++++|+
T Consensus 82 ~~~~~~~~~~~~~i~v~i--T~Ga~~al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~~d~ 159 (396)
T PRK09257 82 LFGADSPALAAGRVATVQ--TPGGTGALRVGADFLKRAFPDAKVWVSDPTWPNHRAIFEAAGLEVKTYPYYDAATKGLDF 159 (396)
T ss_pred hcCCCCcccccCeEEEEe--cCCccHHHHHHHHHHHHhCCCCeEEECCCCcccHHHHHHHcCCcEEEEeccccccCccCH
Confidence 98776666678887 66 999999999985555556899999999999999999999999999999985455689999
Q ss_pred hhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeE
Q 012238 217 EGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMEL 296 (467)
Q Consensus 217 ~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (467)
+.+++.+++.+.+++++++++||||||.+++.+++++|+++|++||++||+||+|.++.++. +.+..++..+....+++
T Consensus 160 ~~l~~~~~~~~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~-~~~~~~~~~~~~~~~~v 238 (396)
T PRK09257 160 DAMLADLSQAPAGDVVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGL-EEDAYGLRAFAAAGLEL 238 (396)
T ss_pred HHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccch-HHHHHHHHHHHhcCCcE
Confidence 99999987544557888889999999999999999999999999999999999999998641 11233444444445789
Q ss_pred EEEecCccCcccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHH
Q 012238 297 LVAQSYSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAE 376 (467)
Q Consensus 297 i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~ 376 (467)
|+++||||+|+++|||+||++++..+++.+.. +..+++...+..+.+++.+.|.++..+|.++.+.+.|.++
T Consensus 239 i~i~SfSK~~~~~GlRiG~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~ 310 (396)
T PRK09257 239 LVASSFSKNFGLYGERVGALSVVAEDAEEADR--------VLSQLKATIRTNYSNPPAHGAAIVATILNDPELRAEWEAE 310 (396)
T ss_pred EEEEEcCCcCccccccceeEEEEeCCHHHHHH--------HHHHHHHHhhhhcCCCcHHHHHHHHHHhCCHHHHHHHHHH
Confidence 99999999999999999999643445555554 4444655555556678889999999999998777778888
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceEEecCCCHHHHHHHHHcccEEEeCCCeEEeccCChhhHHHHH
Q 012238 377 MEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLA 456 (467)
Q Consensus 377 l~~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~~~g~f~~~~l~~~~~~~ll~~~gI~v~~ggRis~~~~~~~~i~~~~ 456 (467)
+++++++|+++|+.+.+.|+ +.+.++.+++..|+||||+|++++.+++.++++++||.+.|.|||+|++++++++++++
T Consensus 311 ~~~~r~~~~~rr~~l~~~L~-~~~~~~~~~~~~p~gg~~~w~~l~~~~~~~l~~~~~V~~~p~~ri~~~~~~~~~i~~~~ 389 (396)
T PRK09257 311 LEEMRERIKAMRQLLVEALK-AKGPSRDFDFIARQRGMFSYSGLTPEQVDRLREEFGVYAVGSGRINVAGLNESNIDYVA 389 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHH-hcCCCCCcccccccceEEEecCCCHHHHHHHHHcCCEEEcCCCeEEEeeCCHHHHHHHH
Confidence 99999999999999999999 77543346788899999999999888889999999999999999999988999999999
Q ss_pred HHHHHHH
Q 012238 457 DAIIDSY 463 (467)
Q Consensus 457 ~~l~~~l 463 (467)
++|++++
T Consensus 390 ~~i~~~~ 396 (396)
T PRK09257 390 EAIAAVL 396 (396)
T ss_pred HHHHhhC
Confidence 9998764
No 7
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.6e-56 Score=445.56 Aligned_cols=345 Identities=20% Similarity=0.244 Sum_probs=300.0
Q ss_pred CCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCc-eeeeecCCch
Q 012238 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQR-VATVQGLSGT 161 (467)
Q Consensus 83 ~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~-i~~~~t~ggt 161 (467)
.++|+|++|+| +++. |+.+++++.+.+..+.. .|+|..|+++||++|++++.+.+|..+++++ |++ |+|++
T Consensus 28 ~~vi~l~iG~P----d~~~-p~~i~~a~~~a~~~~~~-~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~eiiv--t~Ga~ 99 (393)
T COG0436 28 EDVIDLSIGEP----DFPT-PEHIIEAAIEALEEGGT-HYTPSAGIPELREAIAEKYKRRYGLDVDPEEEIIV--TAGAK 99 (393)
T ss_pred CCEEEeCCCCC----CCCC-CHHHHHHHHHHHhcccC-CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEE--eCCHH
Confidence 47999999999 6665 88899999998876533 7889999999999999999999998888876 999 99999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecC-CCCCCChhhHHHHHHcCCCCcEEEEeCCCCC
Q 012238 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDP-KTVGLDFEGMIADIKAAPGGSFILLHGCAHN 240 (467)
Q Consensus 162 ~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~-~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~N 240 (467)
+|+.++ +++.+.|||+|++++|+|+.|...++.+|++++.++++.+ ++|.+|++.+++.++ ++++++++++|||
T Consensus 100 ~al~~~--~~a~~~pGDeVlip~P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~---~ktk~i~ln~P~N 174 (393)
T COG0436 100 EALFLA--FLALLNPGDEVLIPDPGYPSYEAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAIT---PKTKAIILNSPNN 174 (393)
T ss_pred HHHHHH--HHHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcC---ccceEEEEeCCCC
Confidence 999998 6677889999999999999999999999999999998544 489999999999998 5899999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEec
Q 012238 241 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC 320 (467)
Q Consensus 241 PTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~ 320 (467)
|||.+++++++++|+++|++||++||+||+|.++.|++. ...++..+....+++|+++||||.|+|+|||+||++
T Consensus 175 PTGav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~--~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwRvG~~v--- 249 (393)
T COG0436 175 PTGAVYSKEELKAIVELAREHDIIIISDEIYEELVYDGA--EHPSILELAGARDRTITINSFSKTYGMTGWRIGWVV--- 249 (393)
T ss_pred CcCcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCC--CcCCHhhcCCCcceEEEEecccccccccccceeEee---
Confidence 999999999999999999999999999999999999752 233333333335789999999999999999999996
Q ss_pred CC-HHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 012238 321 SS-SDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD 399 (467)
Q Consensus 321 ~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~ 399 (467)
++ +++++. +.+++.....+++.+.|.++..+|++++. . ..++.+++.|+++|+.+.+.|. +.
T Consensus 250 ~~~~~l~~~------------~~~~~~~~~~~~~~~~Q~aa~~aL~~~~~-~---~~~~~~~~~~~~rrd~l~~~l~-~~ 312 (393)
T COG0436 250 GPPEELIAA------------LRKLKSYLTSCAPTPAQYAAIAALNGPQS-D---EVVEEMREEYRERRDLLVEALN-EI 312 (393)
T ss_pred cChHHHHHH------------HHHHHHhcccCCCHHHHHHHHHHhcCccc-h---HHHHHHHHHHHHHHHHHHHHHH-hc
Confidence 55 777777 76777777889999999999999997632 1 2366777999999999999999 77
Q ss_pred CCCCCccccc-CCcceEEecCC-----CHHHHHHHHHcccEEEeCC-------C----eEEeccCChhhHHHHHHHHHHH
Q 012238 400 KSGKDWSFIL-RQIGMFSFTGL-----NKAQSDNMTNKWHVYMTKD-------G----RISLAGLSLAKCEYLADAIIDS 462 (467)
Q Consensus 400 g~~~~~~~~~-~~~g~f~~~~l-----~~~~~~~ll~~~gI~v~~g-------g----Ris~~~~~~~~i~~~~~~l~~~ 462 (467)
+. |.+.. |+|+||+|+++ +.+++.+|++++||.++|| | |||++. +.+++++++++|.+.
T Consensus 313 ~g---~~~~~~p~Ga~Y~~~~i~~~~d~~~f~~~Ll~~~gV~v~PG~~Fg~~~g~~~vRis~~~-~~~~l~~a~~rl~~~ 388 (393)
T COG0436 313 GG---LSVVKPPEGAFYLFPKIPELLDSEEFAKKLLEEAGVAVVPGSGFGEPPGEGYVRLSLAT-SEETLEEALRRLARF 388 (393)
T ss_pred CC---eeeccCCCeeEEEEeecCCCCCHHHHHHHHHHhCCEEEecccccCCCCCCCeEEEEEec-CHHHHHHHHHHHHHH
Confidence 52 67777 88999999966 3578999999999999997 2 999998 679999999999999
Q ss_pred HHhc
Q 012238 463 YHNV 466 (467)
Q Consensus 463 l~~~ 466 (467)
++..
T Consensus 389 ~~~~ 392 (393)
T COG0436 389 LAEY 392 (393)
T ss_pred HHhc
Confidence 8764
No 8
>PLN00175 aminotransferase family protein; Provisional
Probab=100.00 E-value=1.3e-49 Score=402.04 Aligned_cols=359 Identities=16% Similarity=0.162 Sum_probs=294.9
Q ss_pred cCCCCCCCCcccchHHHhhcCCCCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHH
Q 012238 60 EGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELL 139 (467)
Q Consensus 60 ~~~~~~~~~~i~~~~~~~~~~~~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l 139 (467)
.++...+.+.+..+.+... .+++|||+.|.| +.++ ++.+.+++.+.+..+ ...|.+..|.++||+++++++
T Consensus 34 ~~~~~~~~~~~~~~~~~~~---~~~~i~l~~G~P----~~~~-~~~~~~~~~~~~~~~-~~~Y~~~~G~~~Lr~aia~~~ 104 (413)
T PLN00175 34 KRLEKFKTTIFTQMSSLAI---KHGAINLGQGFP----NFDG-PDFVKEAAIQAIRDG-KNQYARGFGVPELNSAIAERF 104 (413)
T ss_pred HHhhcCCCCHHHHHHHHhh---cCCeEecCCCCC----CCCC-CHHHHHHHHHHHhcC-CCCcCCCCCCHHHHHHHHHHH
Confidence 3444455555544444432 247999999999 4444 778899988887654 378999999999999999999
Q ss_pred hCCCCcccccC-ceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhh
Q 012238 140 FGADNSVLKEQ-RVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEG 218 (467)
Q Consensus 140 ~~~~~~~~~~~-~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~ 218 (467)
...++..++++ +|++ |+|+++++.++ +...+.|||+|++++|+|..|...++..|++++.++++++ ++.+|++.
T Consensus 105 ~~~~g~~~~~~~~I~v--t~G~~~al~~~--~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~-~~~~~~~~ 179 (413)
T PLN00175 105 KKDTGLVVDPEKEVTV--TSGCTEAIAAT--ILGLINPGDEVILFAPFYDSYEATLSMAGAKIKTVTLRPP-DFAVPEDE 179 (413)
T ss_pred HHHhCCCCCCCCCEEE--eCCHHHHHHHH--HHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEEECCcc-cCCCCHHH
Confidence 88778888887 7988 99999999987 4555789999999999999999999999999999998633 48899999
Q ss_pred HHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEE
Q 012238 219 MIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV 298 (467)
Q Consensus 219 l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~ 298 (467)
+++.+. ++++++++++||||||.+++.+++++|+++|++||++||+||+|.++.++. +..++..+....+++|+
T Consensus 180 l~~~~~---~~~k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~---~~~s~~~~~~~~~~vi~ 253 (413)
T PLN00175 180 LKAAFT---SKTRAILINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEG---DHISMASLPGMYERTVT 253 (413)
T ss_pred HHHhcC---cCceEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccCC---cccChhhCCCCcCcEEE
Confidence 999886 467889999999999999999999999999999999999999999998753 12233333333478999
Q ss_pred EecCccCcccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHH
Q 012238 299 AQSYSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEME 378 (467)
Q Consensus 299 ~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~ 378 (467)
++||||.|++||||+||++ +++++++. +.........+++.+.|.++..+|+++ +.+++
T Consensus 254 i~SfSK~~~~~G~RiG~~v---~~~~l~~~------------l~~~~~~~~~~~s~~~Q~a~~~~l~~~------~~~~~ 312 (413)
T PLN00175 254 MNSLGKTFSLTGWKIGWAI---APPHLTWG------------VRQAHSFLTFATATPMQWAAVAALRAP------ESYYE 312 (413)
T ss_pred EecchhhccCcchheeeeE---eCHHHHHH------------HHHHHhhccCCCCHHHHHHHHHHHhCC------HHHHH
Confidence 9999999999999999996 78888887 555555445678888999999999764 23477
Q ss_pred HHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceEEecCC------C-HHHHHHHHHcccEEEeCC---------C--
Q 012238 379 MMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL------N-KAQSDNMTNKWHVYMTKD---------G-- 440 (467)
Q Consensus 379 ~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~~~g~f~~~~l------~-~~~~~~ll~~~gI~v~~g---------g-- 440 (467)
+.++.|+++|+.+.+.|+ +.| +.+..|+||+|+|+++ + .++++++++++||.+.|| +
T Consensus 313 ~~~~~~~~~~~~l~~~L~-~~g----~~~~~p~g~~f~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~ 387 (413)
T PLN00175 313 ELKRDYSAKKDILVEGLK-EVG----FKVYPSSGTYFVMVDHTPFGFENDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKN 387 (413)
T ss_pred HHHHHHHHHHHHHHHHHH-HCC----CeecCCCeeEEEEEeccccCCCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCC
Confidence 889999999999999999 776 5677899999999854 2 356788888889999986 1
Q ss_pred --eEEeccCChhhHHHHHHHHHHHHHh
Q 012238 441 --RISLAGLSLAKCEYLADAIIDSYHN 465 (467)
Q Consensus 441 --Ris~~~~~~~~i~~~~~~l~~~l~~ 465 (467)
||+|+. +++++++++++|.+.+++
T Consensus 388 ~iRls~~~-~~e~l~~~~~rL~~~~~~ 413 (413)
T PLN00175 388 LVRFAFCK-DEETLRAAVERMKTKLKR 413 (413)
T ss_pred EEEEEEcC-CHHHHHHHHHHHHHHHhC
Confidence 999997 899999999999998763
No 9
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=100.00 E-value=6.6e-49 Score=395.09 Aligned_cols=342 Identities=14% Similarity=0.130 Sum_probs=273.8
Q ss_pred CCCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccC-ceeeeecCC
Q 012238 81 TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQ-RVATVQGLS 159 (467)
Q Consensus 81 ~~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~-~i~~~~t~g 159 (467)
.+.++|+|+.|++ ..++ ++.+.+++.+.+.......|.+..|.++||+++|+++...+|..++++ +|++ |+|
T Consensus 28 ~~~~~i~l~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~i--t~G 100 (388)
T PRK07366 28 AGKELIDLSLGSS----DLPA-PAHALEAIAQSLHDPSTHGYLLFHGTLDFREAAAQWYEQRFGLAVDPETEVLP--LIG 100 (388)
T ss_pred cCCCeEEeCCCCC----CCCC-CHHHHHHHHHHHhCcccCCCCCCCCCHHHHHHHHHHHHHhhCCcCCCcCeEEE--CCC
Confidence 3457999999987 4554 678888888877544447798899999999999999988778888898 6999 999
Q ss_pred chhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCC
Q 012238 160 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAH 239 (467)
Q Consensus 160 gt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~ 239 (467)
+++++.++ +...+.+||+|++++|+|+.|...++..|++++.+|+++++++.+|++.+++.+. .+++++++++||
T Consensus 101 s~~al~~~--~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~---~~~k~i~l~~p~ 175 (388)
T PRK07366 101 SQEGTAHL--PLAVLNPGDFALLLDPGYPSHAGGVYLAGGQIYPMPLRAENDFLPVFADIPTEVL---AQARLMVLSYPH 175 (388)
T ss_pred cHHHHHHH--HHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEECCCccCCCCCHHHHHHhhc---ccceEEEEeCCC
Confidence 99999997 4445779999999999999999999999999999999655567889999988775 467788999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEe
Q 012238 240 NPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVV 319 (467)
Q Consensus 240 NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v 319 (467)
||||.+++.+++++|+++|++||++||+||+|.++.+++.. ...++..+....+++|+++||||+||+||+|+||++
T Consensus 176 NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~-~~~~~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v-- 252 (388)
T PRK07366 176 NPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEV-EPPSILQADPEKSVSIEFFTLSKSYNMGGFRIGFAI-- 252 (388)
T ss_pred CCCCccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCC-CCCChhhCCCCcccEEEEeecccccCCcchhheehc--
Confidence 99999999999999999999999999999999999875321 112232222233578999999999999999999995
Q ss_pred cCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 012238 320 CSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD 399 (467)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~ 399 (467)
+++++++. +.+.......+.+...+.++...|.+. .+++++.++.++++|+.+.+.|+ ++
T Consensus 253 -~~~~li~~------------l~~~~~~~~~~~~~~~~~~a~~~l~~~------~~~l~~~~~~~~~~r~~l~~~L~-~~ 312 (388)
T PRK07366 253 -GNAQLIQA------------LRQVKAVVDFNQYRGILNGAIAALTGP------QATVQQTVQIFRQRRDAFINALH-QI 312 (388)
T ss_pred -CCHHHHHH------------HHHHHhhcccCCCHHHHHHHHHHHhCc------HHHHHHHHHHHHHHHHHHHHHHH-HC
Confidence 88888887 555544433344333333444444321 24478899999999999999998 77
Q ss_pred CCCCCcccccCCcceEEecCCC-------HHHHHHHHHcccEEEeCC--------C--eEEeccCChhhHHHHHHHHHHH
Q 012238 400 KSGKDWSFILRQIGMFSFTGLN-------KAQSDNMTNKWHVYMTKD--------G--RISLAGLSLAKCEYLADAIIDS 462 (467)
Q Consensus 400 g~~~~~~~~~~~~g~f~~~~l~-------~~~~~~ll~~~gI~v~~g--------g--Ris~~~~~~~~i~~~~~~l~~~ 462 (467)
| +.+..|++|+|+|+++. .++++++++++||.+.|| + ||+|+. +++++++++++|.+.
T Consensus 313 ~----~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~~~l~~~l~rl~~~ 387 (388)
T PRK07366 313 G----WPVPLPEATMYVWAKLPEPWQGNSVEFCTQLVAQTGVAASPGSGFGKSGEGYVRFALVH-DPDILEEAVERIAAF 387 (388)
T ss_pred C----CcccCCCeeEEEEEECCcccCCCHHHHHHHHHHhCCEEEeCchHhCcCCCCeEEEEecC-CHHHHHHHHHHHHHh
Confidence 6 56677899999999652 345677777789999997 1 999987 789999999999875
No 10
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=100.00 E-value=7.6e-50 Score=377.69 Aligned_cols=363 Identities=14% Similarity=0.095 Sum_probs=290.5
Q ss_pred CCCCCCCCcccchHHHhhcCCCCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHh
Q 012238 61 GVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLF 140 (467)
Q Consensus 61 ~~~~~~~~~i~~~~~~~~~~~~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~ 140 (467)
++....++...++.+...+...+.+ |++|.| ..|+ |+.+.+++.+++.....++|.+..|.++|++++++.+.
T Consensus 11 ~l~~~~~~vw~e~~~la~e~~~~~~--LgqGfp----~~~~-P~fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~s 83 (420)
T KOG0257|consen 11 NLSTSKPYVWTEINRLAAEHKVPNP--LGQGFP----DFPP-PKFVTEAAKNAAKEPSTNQYTRGYGLPQLRKALAKAYS 83 (420)
T ss_pred cccccCCcHHHHHHHHHHhcCCCCc--ccCCCC----CCCC-cHHHHHHHHHHhccchhccccccCCchHHHHHHHHHHH
Confidence 3333344444444444433332222 999998 5665 89999999999877656899999999999999999988
Q ss_pred CCCCccccc-CceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeee------cCCCCC
Q 012238 141 GADNSVLKE-QRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYY------DPKTVG 213 (467)
Q Consensus 141 ~~~~~~~~~-~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~------~~~~~~ 213 (467)
..+|....+ ++|+| |.|+.+++..+ ++..+.+||+|+|.+|.|..|...++.+|..++.++.. -..+|.
T Consensus 84 e~~~~~~~~~~eVlV--T~GA~~ai~~~--~~~l~~~GDeVii~eP~fd~Y~~~~~maG~tpv~v~~~~~~g~~~s~~~~ 159 (420)
T KOG0257|consen 84 EFYGGLLDPDDEVLV--TAGANEAISSA--LLGLLNPGDEVIVFEPFFDCYIPQVVMAGGTPVFVPLKPKEGNVSSSDWT 159 (420)
T ss_pred HHhccccCCcccEEE--ecCchHHHHHH--HHHHcCCCCEEEEecCcchhhhhHHhhcCCcceeeccccccccccCcccc
Confidence 866665555 46999 99999999977 67789999999999999999999999999999999886 345789
Q ss_pred CChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcC
Q 012238 214 LDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRG 293 (467)
Q Consensus 214 ~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~ 293 (467)
+|+++++.++. +++++|++|+||||||.++++++|++|+++|++||+++|+||+|..+.+++. +...+..+....
T Consensus 160 ~D~~~le~~~t---~kTk~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~~~lvisDevYe~~v~d~~--~h~r~aslPgm~ 234 (420)
T KOG0257|consen 160 LDPEELESKIT---EKTKAIILNTPHNPTGKVFSREELERIAELCKKHGLLVISDEVYEWLVYDGN--KHIRIASLPGMY 234 (420)
T ss_pred CChHHHHhhcc---CCccEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEhhHhHHHhhCCC--cceeeecCCchh
Confidence 99999999998 7899999999999999999999999999999999999999999999998742 223333344566
Q ss_pred CeEEEEecCccCcccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhh-HH-
Q 012238 294 MELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPAL-FD- 371 (467)
Q Consensus 294 ~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~-~~- 371 (467)
++++.++||||+||++|||+||++ +++.+... +..+........++..|.+.+.++..+.. .+
T Consensus 235 ertitvgS~gKtf~~TGWrlGW~i---gp~~L~~~------------~~~vh~~~~~~~~Tp~q~A~a~a~~~~~~~~~p 299 (420)
T KOG0257|consen 235 ERTITVGSFGKTFGVTGWRLGWAI---GPKHLYSA------------LFPVHQNFVFTCPTPIQEASAAAFALELACLQP 299 (420)
T ss_pred heEEEeccccceeeeeeeeeeeee---chHHhhhh------------HHHHhhccccccCcHHHHHHHHHHhhhhhccCC
Confidence 799999999999999999999996 78777766 66666655556666777777766654321 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceEEecCCC-----------------HHHHHHHHHcccE
Q 012238 372 EWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLN-----------------KAQSDNMTNKWHV 434 (467)
Q Consensus 372 ~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~~~g~f~~~~l~-----------------~~~~~~ll~~~gI 434 (467)
.-...+.++.+.|+++|+.|.+.|. ++| +++..|+|++|+|.+++ -.++.+++++.|+
T Consensus 300 ~~~y~~~~~~~~y~~krdil~k~L~-~lg----~~v~~p~gayyl~adfs~~~~~~~~~~~~~~~~d~~~~~wl~~~~Gv 374 (420)
T KOG0257|consen 300 GGSYFITELVKEYKEKRDILAKALE-ELG----LKVTGPEGAYYLWADFSLAKSWPFFEEILEKPDDFKFVRWLIKEGGV 374 (420)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHH-hcC----CccccCCCceEEEEeccccccCCcchhhccCCCceeeehhhhccCcE
Confidence 0002355699999999999999999 998 58999999999998653 1346789999999
Q ss_pred EEeCCC---------------eEEeccCChhhHHHHHHHHH
Q 012238 435 YMTKDG---------------RISLAGLSLAKCEYLADAII 460 (467)
Q Consensus 435 ~v~~gg---------------Ris~~~~~~~~i~~~~~~l~ 460 (467)
.+.|+. |++++. +.+.++.++++++
T Consensus 375 ~~IP~saF~s~~~~~~~~~~~r~~~~k-~~~~L~~a~e~l~ 414 (420)
T KOG0257|consen 375 VVIPPSAFGSREHIKVAERLVRFCFCK-ADETLRKAIERLK 414 (420)
T ss_pred EEeCchhcCCchhhHHHHHHHHHHHHh-hHHHHHHHHHHHh
Confidence 999871 777777 7788888888887
No 11
>PRK07681 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.1e-48 Score=392.56 Aligned_cols=339 Identities=18% Similarity=0.191 Sum_probs=278.8
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCccccc-CceeeeecCCc
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKE-QRVATVQGLSG 160 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~-~~i~~~~t~gg 160 (467)
++++|||+.|.| ..++ ++.+.+++.+.+.......|. ..|.++||+++|+++...+|..+++ ++|++ |+|+
T Consensus 31 ~~~~i~l~~g~p----~~~~-~~~~~~~~~~~~~~~~~~~y~-~~G~~~lr~aia~~~~~~~g~~~~~~~~I~i--t~G~ 102 (399)
T PRK07681 31 GHKMIDLSIGNP----DMPP-ADFVREEMVHTANQKESYGYT-LSGIQEFHEAVTEYYNNTHNVILNADKEVLL--LMGS 102 (399)
T ss_pred CCCeEEeCCCCC----CCCC-CHHHHHHHHHHHhccccCCCC-CCCcHHHHHHHHHHHHHHhCCCCCCCCeEEE--CCCc
Confidence 458999999987 4444 778888888876543335564 5899999999999998888888888 79999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCC
Q 012238 161 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN 240 (467)
Q Consensus 161 t~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~N 240 (467)
++++.++ +...+.+||+|++++|+|+.|...++..|++++.+|+++++++.+|++.+++.+. ++++++++++|||
T Consensus 103 ~~al~~~--~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~---~~~k~v~l~~P~N 177 (399)
T PRK07681 103 QDGLVHL--PMVYANPGDIILVPDPGYTAYETGIQMAGATSYYMPLKKENDFLPDLELIPEEIA---DKAKMMILNFPGN 177 (399)
T ss_pred HHHHHHH--HHHhCCCCCEEEECCCCccchHHHHHhcCCEEEEEecCCCCCCcCCHHHHHHhcc---ccceEEEEeCCCC
Confidence 9999997 4445779999999999999999999999999999999655567899999998886 4678999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEec
Q 012238 241 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC 320 (467)
Q Consensus 241 PTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~ 320 (467)
|||.+++.+++++|+++|+++|++||+||+|.++.+++. ...+...+....+++|+++||||.||+||+|+||++
T Consensus 178 PTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~--~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~~i--- 252 (399)
T PRK07681 178 PVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGN--KPISFLSVPGAKEVGVEINSLSKSYSLAGSRIGYMI--- 252 (399)
T ss_pred CcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCC--CCCChhhCCCCcccEEEEeecccccCCccceeEEEe---
Confidence 999999999999999999999999999999999987532 112222222233579999999999999999999996
Q ss_pred CCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 012238 321 SSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK 400 (467)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g 400 (467)
+++++++. +.........+++.+.|.++..+|.+.. +++++.++.++++++.+.+.|+ +.|
T Consensus 253 ~~~~l~~~------------~~~~~~~~~~~~s~~~q~~~~~~l~~~~------~~~~~~~~~~~~~~~~l~~~L~-~~g 313 (399)
T PRK07681 253 GNEEIVRA------------LTQFKSNTDYGVFLPIQKAACAALRNGA------AFCEKNRGIYQERRDTLVDGFR-TFG 313 (399)
T ss_pred cCHHHHHH------------HHHHHhhcccCCCHHHHHHHHHHHhCcH------HHHHHHHHHHHHHHHHHHHHHH-HCC
Confidence 78888887 5555544445678888999999987752 3466788899999999999999 776
Q ss_pred CCCCcccccCCcceEEecCC-----CHHHHHHHHHcccEEEeCC--------C--eEEeccCChhhHHHHHHHHHHH
Q 012238 401 SGKDWSFILRQIGMFSFTGL-----NKAQSDNMTNKWHVYMTKD--------G--RISLAGLSLAKCEYLADAIIDS 462 (467)
Q Consensus 401 ~~~~~~~~~~~~g~f~~~~l-----~~~~~~~ll~~~gI~v~~g--------g--Ris~~~~~~~~i~~~~~~l~~~ 462 (467)
+++..|.+|+|+|+.+ +.+++.++++++||.+.|| | ||+++. +++++++++++|+++
T Consensus 314 ----~~~~~p~~g~f~~~~l~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~-~~~~~~~~l~~l~~~ 385 (399)
T PRK07681 314 ----WNVDKPAGSMFVWAEIPKGWTSLSFAYALMDRANVVVTPGHAFGPHGEGFVRIALVQ-DEEVLQQAVENIRNS 385 (399)
T ss_pred ----CcccCCCeeeEEEEECCCCCCHHHHHHHHHHhCCEEEeCChhhCcCCCCeEEEEecC-CHHHHHHHHHHHHHh
Confidence 5677788999999865 2456778888789999997 2 999996 789999999999873
No 12
>PRK08636 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.2e-48 Score=391.59 Aligned_cols=348 Identities=14% Similarity=0.155 Sum_probs=276.3
Q ss_pred CCCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccC-ceeeeecCC
Q 012238 81 TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQ-RVATVQGLS 159 (467)
Q Consensus 81 ~~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~-~i~~~~t~g 159 (467)
.+++.++|+.|.| ..+. ++.+.+++.+.+.......|.+..|.++||+++|+++...++..++++ +|++ |+|
T Consensus 31 ~~~~~~~l~~g~p----~~~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~~ia~~l~~~~~~~~~~~~~I~i--t~G 103 (403)
T PRK08636 31 AGEDIIDFSMGNP----DGPT-PQHIIDKLCESAQKPKTHGYSVSKGIYKLRLAICNWYKRKYNVDLDPETEVVA--TMG 103 (403)
T ss_pred cCCCEEEcCCcCC----CCCC-CHHHHHHHHHHhcCCccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEE--CCC
Confidence 3457999999988 3333 455555555544333347899999999999999999987778888887 7999 999
Q ss_pred chhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhH----HHHHHcCCCCcEEEEe
Q 012238 160 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGM----IADIKAAPGGSFILLH 235 (467)
Q Consensus 160 gt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l----~~~l~~~~~~~~~i~i 235 (467)
+++++.++ +...+.|||+|++++|+|+.|...++..|++++.++++.++++++|++.+ ++.+++...+++++++
T Consensus 104 ~~~al~~~--~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~i~~ 181 (403)
T PRK08636 104 SKEGYVHL--VQAITNPGDVAIVPDPAYPIHSQAFILAGGNVHKMPLEYNEDFELDEDQFFENLEKALRESSPKPKYVVV 181 (403)
T ss_pred hHHHHHHH--HHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEeccccccCccChhhhhhHHHHHHhhccCCceEEEE
Confidence 99999998 44457799999999999999999999999999999985345688998865 4555443457889999
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccce
Q 012238 236 GCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGA 315 (467)
Q Consensus 236 ~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~ 315 (467)
++||||||.+++.+++++|+++|++||++||+||+|.++.+++. ...++..+....+++|+++||||+||+||+|+||
T Consensus 182 ~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~--~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~ 259 (403)
T PRK08636 182 NFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDGY--KTPSILEVEGAKDVAVESYTLSKSYNMAGWRVGF 259 (403)
T ss_pred eCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCC--CCCChhcCCCccccEEEEEecccccCCccceeee
Confidence 99999999999999999999999999999999999999987531 1223323322235678899999999999999999
Q ss_pred EEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 012238 316 MNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSL 395 (467)
Q Consensus 316 ~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l 395 (467)
++ +++++++. +.+.......+++...|.++..++++. .++++++++.++++++.+.+.|
T Consensus 260 iv---~~~~li~~------------~~~~~~~~~~~~~~~~q~~~~~~~~~~------~~~~~~~~~~~~~~~~~l~~~L 318 (403)
T PRK08636 260 VV---GNKKLVGA------------LKKIKSWLDYGMFTPIQVAATIALDGD------QSCVEEIRETYRKRRDVLIESF 318 (403)
T ss_pred ee---CCHHHHHH------------HHHHHHHhcccCChHHHHHHHHHHhCc------HHHHHHHHHHHHHHHHHHHHHH
Confidence 95 88888887 554443333455566777777666532 2347788999999999999999
Q ss_pred hhccCCCCCcccccCCcceEEecCCC--------HHHHHHHHHcccEEEeCC---C-------eEEeccCChhhHHHHHH
Q 012238 396 SAKDKSGKDWSFILRQIGMFSFTGLN--------KAQSDNMTNKWHVYMTKD---G-------RISLAGLSLAKCEYLAD 457 (467)
Q Consensus 396 ~~~~g~~~~~~~~~~~~g~f~~~~l~--------~~~~~~ll~~~gI~v~~g---g-------Ris~~~~~~~~i~~~~~ 457 (467)
+ +.+ +.+..|++|+|+|+.++ .+++.++++++||.+.|| | ||+|+. ++++++++++
T Consensus 319 ~-~~~----~~~~~p~~g~~~~~~l~~~~~~~~~~~l~~~ll~~~gV~v~pg~~f~~~~~~~iRi~~~~-~~~~l~~~~~ 392 (403)
T PRK08636 319 A-NAG----WELQKPRASMFVWAKIPEPARHLGSLEFSKQLLTEAKVAVSPGIGFGEYGDEYVRIALIE-NENRIRQAAR 392 (403)
T ss_pred H-HCC----CcccCCCcceEEEEECCCccCCCCHHHHHHHHHHhCCEEEecchhhCcCCCCeEEEEecC-CHHHHHHHHH
Confidence 9 765 56778999999999763 355677787789999998 1 999995 8999999999
Q ss_pred HHHHHHHhc
Q 012238 458 AIIDSYHNV 466 (467)
Q Consensus 458 ~l~~~l~~~ 466 (467)
+|+++++.+
T Consensus 393 rl~~~l~~~ 401 (403)
T PRK08636 393 NIKKFLKEL 401 (403)
T ss_pred HHHHHHHhh
Confidence 999998764
No 13
>PTZ00377 alanine aminotransferase; Provisional
Probab=100.00 E-value=6.3e-48 Score=397.16 Aligned_cols=362 Identities=18% Similarity=0.144 Sum_probs=282.4
Q ss_pred CCCCcEEecCcccCC---------------CCC---------CCCchHHHHHHHHHHHhc--CCCCcCCCCcchHHHHHH
Q 012238 81 TDEKKLNLGVGAYRT---------------EEL---------QPYVLDVVKKAENLMLER--GENKEYLPIEGLAAFNKV 134 (467)
Q Consensus 81 ~~~~~i~l~~G~~~d---------------~~~---------~p~~~~~v~~a~~~~~~~--~~~~~Y~~~~G~~~lr~a 134 (467)
++.++|+|++|+|-+ ... ....|..+.+++.+++.. .....|.+..|.++||++
T Consensus 44 ~~~~vi~~~~G~p~~~~~~~~~~~~~~~~~~~~p~~i~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~a 123 (481)
T PTZ00377 44 PFDSIVYCNIGNPQALGQKPLTFYRQVLSLVEYPFLLEDPSVSSLFPADVVARAKEYLNAIGGGTGAYTDSAGYPFVRKA 123 (481)
T ss_pred CcceeEEcCCCChhhcCCCCchHHHHHHHHccChhhhcCccccccCCHHHHHHHHHHHHhCCCcccCcCcccCCHHHHHH
Confidence 346899999999921 100 001244666666665533 123679999999999999
Q ss_pred HHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHh-CCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCC
Q 012238 135 TAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY-FPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVG 213 (467)
Q Consensus 135 ia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~-~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~ 213 (467)
+|+++...+|..+++++|++ |+|+++++.++ +...+ .|||.|++++|+|+.|...++..|++++.++++++++++
T Consensus 124 ia~~~~~~~g~~~~~~~I~i--t~Ga~~al~~~--~~~l~~~~gD~Vlv~~P~y~~y~~~~~~~g~~~v~v~~~~~~~~~ 199 (481)
T PTZ00377 124 VAAFIERRDGVPKDPSDIFL--TDGASSGIKLL--LQLLIGDPSDGVMIPIPQYPLYSAAITLLGGKQVPYYLDEEKGWS 199 (481)
T ss_pred HHHHHHHhcCCCCChhhEEE--cCCHHHHHHHH--HHHhccCCCCEEEECCCCchhHHHHHHHcCCEEEEEEeccccCCC
Confidence 99999888888899999999 99999999998 34446 599999999999999999999999999999997666789
Q ss_pred CChhhHHHHHHcC---CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHH
Q 012238 214 LDFEGMIADIKAA---PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFA 290 (467)
Q Consensus 214 ~d~~~l~~~l~~~---~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~ 290 (467)
+|++.+++.++.. ..+++++++++||||||.+++.+++++|+++|++||++||+||+|.++.|++. ....++..+.
T Consensus 200 ~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~~~~~-~~~~s~~~~~ 278 (481)
T PTZ00377 200 LDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYEKGIVLMADEVYQENIYDGE-KPFISFRKVL 278 (481)
T ss_pred CCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhHhhccCCC-CCcccHHHHH
Confidence 9999999998731 12678888889999999999999999999999999999999999999988421 1122222221
Q ss_pred ----hc---CCeEEEEecCccC-cccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHH
Q 012238 291 ----TR---GMELLVAQSYSKN-LGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVAN 362 (467)
Q Consensus 291 ----~~---~~~~i~~~S~SK~-~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 362 (467)
.. +.++|+++||||. +++||||+||++....++++++. +.+.... ..+++.++|.++..
T Consensus 279 ~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~p~~li~~------------l~~~~~~-~~~~~~~~Q~a~~~ 345 (481)
T PTZ00377 279 LELPAEYNTDVELVSFHSTSKGIIGECGRRGGYFELTNIPPEVREQ------------IYKLASI-NLCSNVVGQLMTGL 345 (481)
T ss_pred HhhcccccCCeEEEEEecCCcccccCCcCceEEEEEeCCCHHHHHH------------HHHHhhe-ecCCChHHHHHHHH
Confidence 11 2369999999997 69999999999621148888887 5555433 44578889999999
Q ss_pred HhCCh----hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceEEecCCC-----------------
Q 012238 363 VVGNP----ALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLN----------------- 421 (467)
Q Consensus 363 ~L~~~----~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~~~g~f~~~~l~----------------- 421 (467)
+|+++ ...+.|.+++++.++.++++|+.+.+.|+ ++. ++.+..|+||||+|+.+.
T Consensus 346 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~-~~~---g~~~~~p~gg~fl~~~~~l~~~~~~~~~~~~~~~~ 421 (481)
T PTZ00377 346 MCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDELN-KIE---GVSCQPVEGAMYAFPRIELPEKAIQEAKERGLAPD 421 (481)
T ss_pred HhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCC---CcEeecCCeeEEEEeeccCchhhHHHHHhcCCCcH
Confidence 98642 22234556677777789999999999998 762 268889999999996431
Q ss_pred HHHHHHHHHcccEEEeCCC-----------eEEeccCChhhHHHHHHHHHHHHHh
Q 012238 422 KAQSDNMTNKWHVYMTKDG-----------RISLAGLSLAKCEYLADAIIDSYHN 465 (467)
Q Consensus 422 ~~~~~~ll~~~gI~v~~gg-----------Ris~~~~~~~~i~~~~~~l~~~l~~ 465 (467)
.+++.++++++||.+.||. ||||+. +++++++++++|.+++++
T Consensus 422 ~~~~~~ll~~~gV~v~pG~~F~~~~~~~~~Rls~~~-~~e~l~~~l~rl~~~~~~ 475 (481)
T PTZ00377 422 VLYCLELLESTGIVVVPGSGFGQKPGTYHFRITILP-PEEQIEEMVKKIKEFHES 475 (481)
T ss_pred HHHHHHHHHHcCEEEeCCcccCCCCCCCEEEEEECC-CHHHHHHHHHHHHHHHHH
Confidence 2346678888899999972 999994 888999999999998865
No 14
>PRK08068 transaminase; Reviewed
Probab=100.00 E-value=5e-48 Score=388.74 Aligned_cols=340 Identities=15% Similarity=0.170 Sum_probs=275.3
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccC-ceeeeecCCc
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQ-RVATVQGLSG 160 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~-~i~~~~t~gg 160 (467)
++++|+|+.|.| ..+. ++.+.+++.+.+.......|.|..|.++||+++|+++...+|..++++ +|++ |+|+
T Consensus 31 ~~~~i~l~~~~p----~~~~-~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~g~~~~~~~~i~i--t~G~ 103 (389)
T PRK08068 31 GHDVINLGQGNP----DQPT-PEHIVEALQEAAENPANHKYSPFRGYPFLKEAAADFYKREYGVTLDPETEVAI--LFGG 103 (389)
T ss_pred CCCeEEecCCCC----CCCC-CHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEE--cCCc
Confidence 357899999987 4443 567888888877654447898899999999999999977777778888 7998 9999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCC
Q 012238 161 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN 240 (467)
Q Consensus 161 t~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~N 240 (467)
++++.++ +...+.+||+|++++|+|..|...++..|++++.+|++++.++.+|++.+++.+. .+++++++++|||
T Consensus 104 ~~~l~~~--~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~---~~~~~v~l~~P~N 178 (389)
T PRK08068 104 KAGLVEL--PQCLMNPGDTILVPDPGYPDYLSGVALARAQFETMPLIAENNFLPDYTKIPEEVA---EKAKLMYLNYPNN 178 (389)
T ss_pred HHHHHHH--HHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEeecccccCCCCCHHHHHHhcc---ccceEEEEECCCC
Confidence 9999987 4445679999999999999999999999999999999655567889999998886 4678999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEec
Q 012238 241 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC 320 (467)
Q Consensus 241 PTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~ 320 (467)
|||.+++.+++++|+++|+++|++||+||+|.++.+++. ...+.....+..+++++++||||.||+||+|+||++
T Consensus 179 PTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~--~~~s~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~--- 253 (389)
T PRK08068 179 PTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQ--KPVSFLQTPGAKDVGIELYTLSKTFNMAGWRVAFAV--- 253 (389)
T ss_pred CCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCC--CCcChhhCCCccCCEEEEecchhccCCccceeEeEe---
Confidence 999999999999999999999999999999999877531 111221222234578999999999999999999995
Q ss_pred CCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 012238 321 SSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK 400 (467)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g 400 (467)
+++++++. +.+.......+.+...|.++..++.+. .++++..+++++++|+.+.+.|+ ++|
T Consensus 254 ~~~~l~~~------------l~~~~~~~~~~~~~~~q~~~~~~l~~~------~~~~~~~~~~~~~~r~~~~~~L~-~~g 314 (389)
T PRK08068 254 GNESVIEA------------INLLQDHLFVSLFGAIQDAAIEALLSD------QSCVAELVARYESRRNAFISACR-EIG 314 (389)
T ss_pred cCHHHHHH------------HHHHHhhccCCCChHHHHHHHHHHhCc------HHHHHHHHHHHHHHHHHHHHHHH-HCC
Confidence 78888887 655555545566666677777777543 23467889999999999999999 876
Q ss_pred CCCCcccccCCcceEEecCC----C-HHHHHHHHHcccEEEeCC--------C--eEEeccCChhhHHHHHHHHHHH
Q 012238 401 SGKDWSFILRQIGMFSFTGL----N-KAQSDNMTNKWHVYMTKD--------G--RISLAGLSLAKCEYLADAIIDS 462 (467)
Q Consensus 401 ~~~~~~~~~~~~g~f~~~~l----~-~~~~~~ll~~~gI~v~~g--------g--Ris~~~~~~~~i~~~~~~l~~~ 462 (467)
+.+.+++||+|+|+.+ + .++.+++++++||.+.|| + ||+++. +++++..++++|.++
T Consensus 315 ----~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~-~~~~l~~al~~l~~~ 386 (389)
T PRK08068 315 ----WEVDAPKGSFFAWMPVPKGYTSEQFADLLLEKAHVAVAPGNGFGEHGEGYVRVGLLT-DEERLREAVERIGKL 386 (389)
T ss_pred ----CcccCCCeeEEEEEECCCCCCHHHHHHHHHHhCCEEEecchHhCccCCCeEEEEEcC-CHHHHHHHHHHHHHh
Confidence 5778889999999855 2 355677777689999986 1 999986 778888888888753
No 15
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=100.00 E-value=1.5e-47 Score=397.50 Aligned_cols=376 Identities=19% Similarity=0.168 Sum_probs=287.7
Q ss_pred cccCCCCCCCCcccchHHHhh--cCCCCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHH
Q 012238 58 RFEGVTMAPPDPILGVSEAFK--ADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVT 135 (467)
Q Consensus 58 ~~~~~~~~~~~~i~~~~~~~~--~~~~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~ai 135 (467)
.+.++...+.+.+..+.+..+ +..+.++|+|++|+| +..++++ ++.+.+++.+.+.. ...|++..|.++||+++
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~G~p-~~~~~~~-p~~~~~~~~~~~~~--~~~Y~~~~G~~~lReai 194 (517)
T PRK13355 119 KSHKLDNVLYDVRGPVVDEANRMEAAGTHILKLNIGNP-APFGFRT-PDEVVYDMAQQLTD--TEGYSDSKGLFSARKAI 194 (517)
T ss_pred hhHHhhccCccHHHHHHHHHHHHHHcCCCeEEecCcCC-CcCCCCC-CHHHHHHHHHHhhc--CCCCCCCcChHHHHHHH
Confidence 445555555554543433332 234568999999988 3334443 77788888776643 36799999999999999
Q ss_pred HHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCC
Q 012238 136 AELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLD 215 (467)
Q Consensus 136 a~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d 215 (467)
|+++...++..+++++|++ |+|+++++.++ +...+.+||+|++++|+|+.|...++..|++++.++++++.+|.+|
T Consensus 195 a~~~~~~~~~~~~~~~I~i--t~G~~eal~~~--~~~l~~~Gd~Vli~~P~y~~y~~~~~~~g~~~v~~~~~~~~~~~~d 270 (517)
T PRK13355 195 MQYAQLKGLPNVDVDDIYT--GNGVSELINLS--MSALLDDGDEVLIPSPDYPLWTACVNLAGGTAVHYRCDEQSEWYPD 270 (517)
T ss_pred HHHHHhcCCCCCChhHEEE--eCcHHHHHHHH--HHHhCCCCCEEEEcCCCCcCHHHHHHHCCCEEEEeecCcccCCCCC
Confidence 9998776666688999999 99999999998 4445789999999999999999999999999999998766678999
Q ss_pred hhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCe
Q 012238 216 FEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGME 295 (467)
Q Consensus 216 ~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~ 295 (467)
++.+++.+. +++++++++|||||||.+++.+++++|+++|++||++||+||+|.++.+++. ...++..+. ....
T Consensus 271 ~~~l~~~~~---~~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~--~~~s~~~~~-~~~~ 344 (517)
T PRK13355 271 IDDIRSKIT---SRTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGL--EHTSIASLA-PDLF 344 (517)
T ss_pred HHHHHHhcC---cCceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCC--CcccHHHhC-CCCe
Confidence 999999886 5788999999999999999999999999999999999999999999987642 222332321 2235
Q ss_pred EEEEecCccCcccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHH
Q 012238 296 LLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKA 375 (467)
Q Consensus 296 ~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~ 375 (467)
+++++||||.|+++|||+||+++ .+++++++. +...+..... ...+++.++|.++..+|.+.... .+
T Consensus 345 vi~~~S~SK~~~~~G~RiG~~i~-~~~~~~~~~--------~~~~l~~~~~-~~~~~~~~~q~a~~~aL~~~~~~---~~ 411 (517)
T PRK13355 345 CVTFSGLSKSHMIAGYRIGWMIL-SGNKRIAKD--------YIEGLNMLAN-MRLCSNVPAQSIVQTALGGHQSV---KD 411 (517)
T ss_pred EEEEecchhhccCcccceEEEEe-eCchhhHHH--------HHHHHHHHhc-CcCCcChHHHHHHHHHhcCCccH---HH
Confidence 78889999999999999999961 244554443 3333433322 23457788899999998753221 23
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceEEecCC---------CHHHHHHHHHcccEEEeCCC------
Q 012238 376 EMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL---------NKAQSDNMTNKWHVYMTKDG------ 440 (467)
Q Consensus 376 ~l~~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~~~g~f~~~~l---------~~~~~~~ll~~~gI~v~~gg------ 440 (467)
++... .++.++|+++.+.|+ +++ + +++..|+|+||+|+++ +.+++.++++++||.+.||.
T Consensus 412 ~~~~~-~~~~~~r~~l~~~L~-~~~--g-~~~~~p~g~fy~~~~l~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~ 486 (517)
T PRK13355 412 YLVPG-GRVYEQRELVYNALN-AIP--G-ISAVKPKAAFYIFPKIDVKKFNIHDDEQFALDLLHDKKVLIVQGTGFNWDK 486 (517)
T ss_pred HHHHH-HHHHHHHHHHHHHHh-cCC--C-cccCCCCeeeEEEeecCcccCCCCCHHHHHHHHHHhCCEEEeCcchhCCCC
Confidence 34444 344456899999998 762 1 6888999999999754 23567788888899999971
Q ss_pred ----eEEeccCChhhHHHHHHHHHHHHHhc
Q 012238 441 ----RISLAGLSLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 441 ----Ris~~~~~~~~i~~~~~~l~~~l~~~ 466 (467)
||+|+. ++++++.++++|.+.+...
T Consensus 487 ~~~~Ris~~~-~~~~l~~a~~rl~~~~~~~ 515 (517)
T PRK13355 487 PDHFRVVYLP-RLEDLEDAMDRLADFFSYY 515 (517)
T ss_pred cCEEEEEeCC-CHHHHHHHHHHHHHHHHHh
Confidence 999976 8899999999999998753
No 16
>PRK06855 aminotransferase; Validated
Probab=100.00 E-value=1.2e-47 Score=389.86 Aligned_cols=354 Identities=13% Similarity=0.099 Sum_probs=279.8
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCch
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (467)
+.++++|++|+| +..++++ |+.+.+++.+.+.......|.+..|.++||+++++++...+|..+++++|++ |+|++
T Consensus 31 g~~~~~~~~G~p-~~~~~~~-p~~~~~a~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~I~i--t~G~~ 106 (433)
T PRK06855 31 GVKITWENIGDP-IAKGEKI-PDWMKEIVAELVMDDKSYGYCPTKGVLETREFLAELNNKRGGAQITPDDIIF--FNGLG 106 (433)
T ss_pred cccccccccCCC-cccCCCC-CHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHhccCCCCCHhHEEE--cCcHH
Confidence 347899999988 3223444 7888888888775444478999999999999999999888888899999999 99999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHH-hhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCC
Q 012238 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIF-NDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN 240 (467)
Q Consensus 162 ~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~-~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~N 240 (467)
+++.++ +..+.|||.|++++|+|+.|.... ...|++++.+++++++++++|++.+++.++.. ++++++++++|||
T Consensus 107 ~al~~~---~~l~~~Gd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~-~~~~~i~l~~P~N 182 (433)
T PRK06855 107 DAIAKI---YGLLRREARVIGPSPAYSTHSSAEAAHAGYPPVTYRLDPENNWYPDLDDLENKVKYN-PSIAGILLINPDN 182 (433)
T ss_pred HHHHHH---HHhcCCCCeEEEeCCCCchHHHHHHHhcCCeEEEEecccccCCCCCHHHHHHHHhcC-CCceEEEEECCCC
Confidence 999987 245779999999999999987653 45688999999865567889999999998642 3567888899999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEec
Q 012238 241 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC 320 (467)
Q Consensus 241 PTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~ 320 (467)
|||.+++.+++++|+++|++||++||+||+|.++.+++. ...++..+.. ..++|+++||||.|++||||+||++ +
T Consensus 183 PTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~--~~~sl~~~~~-~~~~I~~~S~SK~~~~pGlRiG~ii--~ 257 (433)
T PRK06855 183 PTGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGK--KTVPLSEVIG-DVPGIALKGISKELPWPGSRCGWIE--V 257 (433)
T ss_pred CCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC--CCCCHHHHcC-cCCeEEEecCccccCCCcceEEEEE--E
Confidence 999999999999999999999999999999999987532 2223333322 2368999999999999999999996 3
Q ss_pred CC---HHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 012238 321 SS---SDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSA 397 (467)
Q Consensus 321 ~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~ 397 (467)
.+ .+.+.. +...+...... ..+++.+.|.++..+|.++.+ ++++++.++.|+++++.+.+.|+
T Consensus 258 p~~~~~~~~~~--------~~~~~~~~~~~-~~~~~~~~Q~a~~~~l~~~~~----~~~~~~~~~~~~~r~~~~~~~L~- 323 (433)
T PRK06855 258 YNADKDEVFKK--------YINSILNAKMI-EVCSTTLPQMAIPRIMSHPEY----KNYLKERNKRYEKRSNIAYEKLK- 323 (433)
T ss_pred eCCchhhHHHH--------HHHHHHHhhcc-ccCCChHHHHHHHHhhcCCcH----HHHHHHHHHHHHHHHHHHHHHHh-
Confidence 21 121122 22223333222 335678899999999987644 45578899999999999999998
Q ss_pred ccCCCCCcccccCCcceEEecCCC--------------------------------HHHHHHHHHcccEEEeCCC-----
Q 012238 398 KDKSGKDWSFILRQIGMFSFTGLN--------------------------------KAQSDNMTNKWHVYMTKDG----- 440 (467)
Q Consensus 398 ~~g~~~~~~~~~~~~g~f~~~~l~--------------------------------~~~~~~ll~~~gI~v~~gg----- 440 (467)
++. + +.+..|+||||+|+.+. .+++..+++++||.+.||.
T Consensus 324 ~~~--~-~~~~~p~gg~~~w~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~~~ 400 (433)
T PRK06855 324 DVP--G-LKVNRTNGAFYMTVVFEDGVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFCTE 400 (433)
T ss_pred cCC--C-eeccCCCeeEEEeeccccccccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCCCC
Confidence 752 2 67788999999998663 2345577778899999982
Q ss_pred ----eEEeccCChhhHHHHHHHHHHHHHh
Q 012238 441 ----RISLAGLSLAKCEYLADAIIDSYHN 465 (467)
Q Consensus 441 ----Ris~~~~~~~~i~~~~~~l~~~l~~ 465 (467)
||||+..+++++++++++|.+++++
T Consensus 401 ~~~~Rls~~~~~~~~i~~~~~~l~~~~~~ 429 (433)
T PRK06855 401 LNGFRVTLLERDEEKFEWIYQTLAEKIEE 429 (433)
T ss_pred CCceEEEECCCcHHHHHHHHHHHHHHHHH
Confidence 9999987899999999999999875
No 17
>PLN02187 rooty/superroot1
Probab=100.00 E-value=1.6e-47 Score=390.66 Aligned_cols=355 Identities=14% Similarity=0.121 Sum_probs=280.4
Q ss_pred CCCCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCC
Q 012238 80 DTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 159 (467)
Q Consensus 80 ~~~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g 159 (467)
...+++|+|++|+| |....+.+++.+.+++.+.+..+....|.|..|.++||+++|+++...++..+++++|++ |+|
T Consensus 63 ~~~~~vi~l~~Gdp-~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~aiA~~~~~~~~~~~~~~~I~i--t~G 139 (462)
T PLN02187 63 DVNKTILPLGHGDP-SVYPCFRTCIEAEDAVVDVLRSGKGNSYGPGAGILPARRAVADYMNRDLPHKLTPEDIFL--TAG 139 (462)
T ss_pred CCCCCeEECCCCCC-CCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCChHHHHHHHHHHHHHhcCCCCCcccEEE--eCC
Confidence 34568999999987 211112236788888888776554578999999999999999999877788889999999 999
Q ss_pred chhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCC
Q 012238 160 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAH 239 (467)
Q Consensus 160 gt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~ 239 (467)
+++++.++ +...+.|||+|++++|+|+.|...++..|++++.+++.+++++++|++.+++.++ .+++++++++||
T Consensus 140 ~~~al~~~--~~~l~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~~l~~~~~~~~d~~~l~~~~~---~~~~~v~i~nP~ 214 (462)
T PLN02187 140 CNQGIEIV--FESLARPNANILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIAD---ENTVAMVVINPN 214 (462)
T ss_pred HHHHHHHH--HHHhcCCCCEEEEeCCCCccHHHHHHHcCCEEEEEeCccccCCccCHHHHHHhcC---CCcEEEEEeCCC
Confidence 99999998 4445679999999999999999999999999999998655678999999998876 567899999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEe
Q 012238 240 NPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVV 319 (467)
Q Consensus 240 NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v 319 (467)
||||.+++.+++++|+++|++||++||+||+|.++.+++. ...++..+. ...++|+++||||.|++||||+||++
T Consensus 215 NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~--~~~s~~~~~-~~~~vi~l~SfSK~f~~pGlRiG~~v-- 289 (462)
T PLN02187 215 NPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDN--PFVSMGKFA-SIVPVLTLAGISKGWVVPGWKIGWIA-- 289 (462)
T ss_pred CCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccCCC--CceeHHHhc-cCCcEEEEecchhhcCCccceeEEEE--
Confidence 9999999999999999999999999999999999988642 222333332 22479999999999999999999996
Q ss_pred cCCHH-HHhhhhhhhHHHHHHHHHhhccCc--cCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 012238 320 CSSSD-LAARCCEVAVIQVKSQLKRLARPM--YSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLS 396 (467)
Q Consensus 320 ~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~ 396 (467)
+.+++ .++ +...+....... ..+++.+.|.++..+|.+.. .+++++.++.++++|+.+.+.|+
T Consensus 290 ~~~p~~~~~---------~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~-----~~~l~~~~~~l~~~r~~l~~~L~ 355 (462)
T PLN02187 290 LNDPEGVFE---------TTKVLQSIKQNLDVTPDPATIIQAALPAILEKAD-----KNFFAKKNKILKHNVDLVCDRLK 355 (462)
T ss_pred ecCchhHHH---------HHHHHHHHHHhccccCCCCHHHHHHHHHHHhcCc-----HHHHHHHHHHHHHHHHHHHHHHh
Confidence 33433 222 111144433332 22457889999999886421 24477889999999999999999
Q ss_pred hccCCCCCcccccCCcceEEecCC---------CH-HHHHHHHHcccEEEeCCC--------eEEeccCChhhHHHHHHH
Q 012238 397 AKDKSGKDWSFILRQIGMFSFTGL---------NK-AQSDNMTNKWHVYMTKDG--------RISLAGLSLAKCEYLADA 458 (467)
Q Consensus 397 ~~~g~~~~~~~~~~~~g~f~~~~l---------~~-~~~~~ll~~~gI~v~~gg--------Ris~~~~~~~~i~~~~~~ 458 (467)
+++. ...+..|++|+|+|+.+ +. +++.++++++||.+.||. ||+|+. ++++++.++++
T Consensus 356 -~~~~--~~~~~~P~gg~fl~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~iRis~~~-~~e~l~~al~r 431 (462)
T PLN02187 356 -DIPC--VVCPKKPESCTYLLTKLELSLMDNIKDDIDFCVKLAREENLVFLPGDALGLKNWMRITIGV-EAHMLEDALER 431 (462)
T ss_pred -hCCC--CcCCCCCCEeEEEEeecChhhCCCCCCHHHHHHHHHhhCCEEEECccccCCCCeEEEEeCC-CHHHHHHHHHH
Confidence 7642 11234688999999853 22 557788788899999982 999998 78999999999
Q ss_pred HHHHHHh
Q 012238 459 IIDSYHN 465 (467)
Q Consensus 459 l~~~l~~ 465 (467)
|.+++++
T Consensus 432 L~~~l~~ 438 (462)
T PLN02187 432 LKGFCTR 438 (462)
T ss_pred HHHHHHH
Confidence 9999865
No 18
>PRK06207 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-47 Score=387.37 Aligned_cols=345 Identities=17% Similarity=0.177 Sum_probs=278.9
Q ss_pred CCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCccccc-CceeeeecCCch
Q 012238 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKE-QRVATVQGLSGT 161 (467)
Q Consensus 83 ~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~-~~i~~~~t~ggt 161 (467)
.+.|+|+.|.+ ....+++.+.+++.+.+.......|.+..|.++||+++++++...+|..+++ ++|++ |+|++
T Consensus 39 ~~~i~l~~g~~----~~~~p~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~~I~i--t~Ga~ 112 (405)
T PRK06207 39 GRPVDFSHGDV----DAHEPTPGAFELFSAGVERGGVQAYTEYRGDADIRELLAARLAAFTGAPVDAADELII--TPGTQ 112 (405)
T ss_pred CCceecCCcCC----CCCCCCHHHHHHHHHHHhcCCCccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEE--eCCcH
Confidence 37899999988 2212367778887777654434679889999999999999998777777788 89999 99999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeee---cCCCCCCChhhHHHHHHcCCCCcEEEEeCCC
Q 012238 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYY---DPKTVGLDFEGMIADIKAAPGGSFILLHGCA 238 (467)
Q Consensus 162 ~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~---~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p 238 (467)
+++.++ +...+.+||+|++++|+|+.|...++..|++++.++++ .++++++|++.+++.++ .+++++++++|
T Consensus 113 ~al~~~--~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~---~~~k~v~l~~P 187 (405)
T PRK06207 113 GALFLA--VAATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYLSADKRAGLDLDQLEEAFK---AGVRVFLFSNP 187 (405)
T ss_pred HHHHHH--HHHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEeccccCcccCCCcCHHHHHHhhh---hcCeEEEECCC
Confidence 999997 44457799999999999999999999999999999875 23468899999999887 46778899999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEE
Q 012238 239 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNV 318 (467)
Q Consensus 239 ~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~ 318 (467)
|||||.+++.+++++|+++|++||++||+||+|.++.+++. ...++..+....+++++++||||.|++||+|+||++
T Consensus 188 ~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~--~~~~~~~~~~~~~~vi~i~SfSK~~~lpGlRiG~ii- 264 (405)
T PRK06207 188 NNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGT--SYTHLRALPIDPENVITIMGPSKTESLSGYRLGVAF- 264 (405)
T ss_pred CCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC--CCCchhcCCCCcCcEEEEecchhhccCcccceEEEE-
Confidence 99999999999999999999999999999999999987532 112222222234689999999999999999999995
Q ss_pred ecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 012238 319 VCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAK 398 (467)
Q Consensus 319 v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~ 398 (467)
++++++++ +.........+.+.+.|.++..+|+++. .++++..++++++|+.+.+.|+ .
T Consensus 265 --~~~~l~~~------------~~~~~~~~~~~~~~~~q~a~~~~l~~~~------~~~~~~~~~~~~~r~~l~~~L~-~ 323 (405)
T PRK06207 265 --GSPAIIDR------------MEKLQAIVSLRAAGYSQAVLRTWFSEPD------GWMKDRIARHQAIRDDLLRVLR-G 323 (405)
T ss_pred --cCHHHHHH------------HHHHHhHhccCCCHHHHHHHHHHHhCcH------HHHHHHHHHHHHHHHHHHHHHh-c
Confidence 78888887 6555555455677788999988887531 1244566677888999999998 7
Q ss_pred cCCCCCcccccCCcceEEecCCC------HHHHHHHHHcccEEEeCCC----------eEEeccCChhhHHHHHHHHHHH
Q 012238 399 DKSGKDWSFILRQIGMFSFTGLN------KAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEYLADAIIDS 462 (467)
Q Consensus 399 ~g~~~~~~~~~~~~g~f~~~~l~------~~~~~~ll~~~gI~v~~gg----------Ris~~~~~~~~i~~~~~~l~~~ 462 (467)
+. .+++..|++|+|+|+.+. .++.+.+++++||.+.||. ||||+. +++++++++++|.++
T Consensus 324 ~~---~~~~~~p~gg~fl~~~l~~~~~~~~~~~~~l~~~~gV~v~pG~~F~~~~~~~~Ris~~~-~~~~l~~al~rl~~~ 399 (405)
T PRK06207 324 VE---GVFVRAPQAGSYLFPRLPRLAVSLHDFVKILRLQAGVIVTPGTEFSPHTADSIRLNFSQ-DHAAAVAAAERIAQL 399 (405)
T ss_pred CC---CceecCCCeeEEEEEeCcccCCCHHHHHHHHHHhcCEEEeCchHhCCCCCCeEEEEecC-CHHHHHHHHHHHHHH
Confidence 62 167778999999998753 3456677767899999971 999998 789999999999999
Q ss_pred HHhc
Q 012238 463 YHNV 466 (467)
Q Consensus 463 l~~~ 466 (467)
++++
T Consensus 400 l~~~ 403 (405)
T PRK06207 400 IERY 403 (405)
T ss_pred HHHh
Confidence 8764
No 19
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=1.3e-47 Score=387.34 Aligned_cols=364 Identities=15% Similarity=0.141 Sum_probs=282.9
Q ss_pred hHHHhhcCCCCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCce
Q 012238 73 VSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRV 152 (467)
Q Consensus 73 ~~~~~~~~~~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i 152 (467)
+.+.+.++.++++|+|++|+|-....+++ ++.+.+++.+.+.......|.|..|.++||+++++++...+|..+++++|
T Consensus 22 ~~~~~~~~~~~~~i~l~~G~p~~~~~~~~-p~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~I 100 (409)
T PLN00143 22 LKENFNEDDHRLAISFGFGDPSCFECFRT-TNIAEDAIVEAVRSAKFNSYAPTGGILPARRAIADYLSNDLPYQLSPDDV 100 (409)
T ss_pred HHHhcccCCCCceeeCCCCCCCCCCCCCC-CHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCHhhE
Confidence 33445566778999999999811112554 88889998888765444679999999999999999998888888899999
Q ss_pred eeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEE
Q 012238 153 ATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFI 232 (467)
Q Consensus 153 ~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~ 232 (467)
++ |+|+++++.++ +...+.+||.|++++|+|+.|...++..|++++.+++.+++++.+|++.+++.++ .++++
T Consensus 101 ~i--t~G~~~al~~~--~~~l~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~---~~~~~ 173 (409)
T PLN00143 101 YL--TLGCKHAAEII--IKVLARPEANILLPRPGFPDVETYAIFHHLEIRHFDLLPEKGWEVDLDAVEAIAD---ENTIA 173 (409)
T ss_pred EE--ecChHHHHHHH--HHHHcCCCCEEEEcCCCCcCHHHHHHHcCCEEEEEeccCCCCCcCCHHHHHHhcc---cCCEE
Confidence 99 99999999998 4445679999999999999999999999999999998655678899999998876 56778
Q ss_pred EEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCc
Q 012238 233 LLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAER 312 (467)
Q Consensus 233 i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R 312 (467)
++++|||||||.+++.+++++|+++|++||++||+||+|.++.+++. ...++..+ ...+++|+++||||.|++||+|
T Consensus 174 ~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~--~~~~~~~~-~~~~~vi~~~SfSK~f~~pGlR 250 (409)
T PLN00143 174 MVIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSK--PFVPMGLF-ASIVPVITLGSISKRWMIPGWG 250 (409)
T ss_pred EEEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccCCC--CCcchhhh-cccCcEEEEccchhhcCCCccc
Confidence 88899999999999999999999999999999999999999988531 11222222 3445899999999999999999
Q ss_pred cceEEEecC-CHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHH
Q 012238 313 IGAMNVVCS-SSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKL 391 (467)
Q Consensus 313 iG~~~~v~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l 391 (467)
+||++ +. ++.+++. .++...+.+.... ...++.+.|.++..+|.+.. ...+++.+++++++++.+
T Consensus 251 vG~~v--~~~p~~~~~~------~~~~~~~~~~~~~-~~~~~~~~q~a~~~~l~~~~-----~~~~~~~~~~~~~~~~~~ 316 (409)
T PLN00143 251 LGWLV--TCDPSGLLQI------CEIADSIKKALNP-APFPPTFIQAAIPEILEKTT-----EDFFSKTINILRAALAFC 316 (409)
T ss_pred eEEEE--eeCchhhhhh------HHHHHHHHHHHhc-cCCCCchHHHHHHHHHhcCh-----HHHHHHHHHHHHHHHHHH
Confidence 99996 43 3333321 0012224333322 22346778899988886521 223667788888888989
Q ss_pred HHHhhhccCCCCCcccccCCcceEEecCCC----------HHHHHHHHHcccEEEeCCC--------eEEeccCChhhHH
Q 012238 392 FDSLSAKDKSGKDWSFILRQIGMFSFTGLN----------KAQSDNMTNKWHVYMTKDG--------RISLAGLSLAKCE 453 (467)
Q Consensus 392 ~~~l~~~~g~~~~~~~~~~~~g~f~~~~l~----------~~~~~~ll~~~gI~v~~gg--------Ris~~~~~~~~i~ 453 (467)
.+.|+ +++. ......|+||+|+|+.+. .+++.++++++||.+.||. ||+|+. ++++++
T Consensus 317 ~~~L~-~~~~--~~~~~~p~gg~f~w~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRi~~~~-~~~~l~ 392 (409)
T PLN00143 317 YDKLK-EIPC--IMCPQKAEGAFFALVKLNLLLLEDIEDDMEFCLKLAKEESLIILPGVTVGLKNWLRITFAV-EQSSLE 392 (409)
T ss_pred HHHHh-cCCC--CCCCCCCCeeEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEEcC-CHHHHH
Confidence 99998 7642 111246889999998763 2456677778899999982 999997 789999
Q ss_pred HHHHHHHHHHHh
Q 012238 454 YLADAIIDSYHN 465 (467)
Q Consensus 454 ~~~~~l~~~l~~ 465 (467)
+++++|.+++++
T Consensus 393 ~al~rl~~~l~~ 404 (409)
T PLN00143 393 DGLGRLKSFCGR 404 (409)
T ss_pred HHHHHHHHHHHH
Confidence 999999998865
No 20
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=100.00 E-value=1.7e-47 Score=385.73 Aligned_cols=357 Identities=17% Similarity=0.150 Sum_probs=283.8
Q ss_pred CCCCcccchHHHhh---cCCCCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhC
Q 012238 65 APPDPILGVSEAFK---ADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFG 141 (467)
Q Consensus 65 ~~~~~i~~~~~~~~---~~~~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~ 141 (467)
.+++.+..+.+.++ +..+.++|+|++|+| .+++ ++.+.+++.+.+.. ...|.+..|.++||+++|+++..
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p----~~~~-~~~~~~~~~~~~~~--~~~Y~~~~G~~~lr~~ia~~~~~ 80 (396)
T PRK09147 8 LQPYPFEKLRALFAGVTPPADLPPISLSIGEP----KHPT-PAFIKDALAANLDG--LASYPTTAGLPALREAIAAWLER 80 (396)
T ss_pred CCcchHHHHHHHHHhhhhccCCCeEecCCCCC----CCCC-CHHHHHHHHHHhhh--hcCCCCCCCCHHHHHHHHHHHHH
Confidence 34445555555543 234568999999998 4444 77888888877642 47898899999999999999987
Q ss_pred CCCcc-cccC-ceeeeecCCchhHHHHHHHHHHHhCC---CCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCCh
Q 012238 142 ADNSV-LKEQ-RVATVQGLSGTGSLRLAAALIERYFP---GAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDF 216 (467)
Q Consensus 142 ~~~~~-~~~~-~i~~~~t~ggt~al~l~~~~l~~~~~---gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~ 216 (467)
.+|.. ++++ +|++ |+|+++++.++ +...+.| ||.|++++|+|..|..+++..|++++.+|+++++++++|+
T Consensus 81 ~~g~~~~~~~~~i~i--t~G~~~al~~~--~~~l~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~vp~~~~~~~~~d~ 156 (396)
T PRK09147 81 RYGLPALDPATQVLP--VNGSREALFAF--AQTVIDRDGPGPLVVCPNPFYQIYEGAALLAGAEPYFLNCDPANNFAPDF 156 (396)
T ss_pred HhCCCcCCccceEEE--CCChHHHHHHH--HHHHcCCCCCCCEEEEcCCCccchHHHHHhcCCEEEEeccCccccCccCH
Confidence 77877 7885 8999 99999999997 4445678 8999999999999999999999999999996556789999
Q ss_pred hhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHH----hc
Q 012238 217 EGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFA----TR 292 (467)
Q Consensus 217 ~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~----~~ 292 (467)
+.+++.+. .++++++++|||||||.+++.+++++|+++|++||++||+||+|.++.+++............ +.
T Consensus 157 ~~l~~~~~---~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (396)
T PRK09147 157 DAVPAEVW---ARTQLLFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDD 233 (396)
T ss_pred HHHHHHHh---hccEEEEEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCccc
Confidence 99998876 467888899999999999999999999999999999999999999998753111111111111 12
Q ss_pred CCeEEEEecCccCcccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHH
Q 012238 293 GMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDE 372 (467)
Q Consensus 293 ~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~ 372 (467)
.+++|+++||||.|+++|+|+||++ +++++++. +.+.......+++.+.|.++...+.+.
T Consensus 234 ~~~vi~~~S~SK~~~~~GlRiG~~~---~~~~l~~~------------~~~~~~~~~~~~~~~~q~a~~~~~~~~----- 293 (396)
T PRK09147 234 FKRLVVFHSLSKRSNVPGLRSGFVA---GDAALLKK------------FLLYRTYHGCAMPPAVQAASIAAWNDE----- 293 (396)
T ss_pred cccEEEEeccccccCCccceeeeec---CCHHHHHH------------HHHHhhhcccCCCHHHHHHHHHHhcch-----
Confidence 3689999999999999999999995 78888877 554444334467778888877776542
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceEEecCC---CHHHHHHHHHcccEEEeCC----------
Q 012238 373 WKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL---NKAQSDNMTNKWHVYMTKD---------- 439 (467)
Q Consensus 373 ~~~~l~~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~~~g~f~~~~l---~~~~~~~ll~~~gI~v~~g---------- 439 (467)
+++++.++.++++|+.+.+.|+ +. +.+..|++|+|+|+++ +.++++++++++||.+.||
T Consensus 294 --~~~~~~~~~~~~~~~~~~~~L~-~~-----~~~~~p~~g~f~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~ 365 (396)
T PRK09147 294 --AHVRENRALYREKFDAVTPILA-PV-----LDVQLPDAGFYLWAKVPGDDTEFARRLYADYNVTVLPGSYLAREAHGV 365 (396)
T ss_pred --hHHHHHHHHHHHHHHHHHHHHH-Hh-----cCCCCCCeeEEEEEECCCCHHHHHHHHHHhCCEEEeCCccccccccCC
Confidence 3477889999999999999998 64 3456789999999976 3456778887789999875
Q ss_pred ----C--eEEeccCChhhHHHHHHHHHHHHH
Q 012238 440 ----G--RISLAGLSLAKCEYLADAIIDSYH 464 (467)
Q Consensus 440 ----g--Ris~~~~~~~~i~~~~~~l~~~l~ 464 (467)
+ ||+|+. +++++++++++|+++++
T Consensus 366 ~~~~~~iRi~~~~-~~~~l~~~l~rl~~~~~ 395 (396)
T PRK09147 366 NPGAGRVRIALVA-PLAECVEAAERIVDFCR 395 (396)
T ss_pred CCCCCeEEEEecC-CHHHHHHHHHHHHHHhc
Confidence 1 999998 78899999999998764
No 21
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=5.9e-47 Score=384.04 Aligned_cols=355 Identities=16% Similarity=0.167 Sum_probs=283.2
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCch
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (467)
+.++|+|++|+|.-...+++ ++.+.+++.+.+..+....|.+..|.+++|+++++++...++..+++++|++ |+|++
T Consensus 51 ~~~~i~l~~G~P~~~~~~~~-~~~~~~a~~~al~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~v~i--t~G~~ 127 (430)
T PLN00145 51 PRPVLPLGHGDPSAFPCFRT-APEAEDAVAAALRSGKYNSYSTCVGLLPARRAIAEYLSRDLPYELSTDDIYL--TAGCA 127 (430)
T ss_pred CCCeeeCCCCCCCCCCCCCC-CHHHHHHHHHHHHcCcCCCCCCCccCHHHHHHHHHHHhhccCCCCChhhEEE--eCCHH
Confidence 45899999998821112333 7788999988876544468998999999999999999888888889999999 99999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCC
Q 012238 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 241 (467)
Q Consensus 162 ~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NP 241 (467)
++++++ +.....|||+|++++|+|+.|...+...|++++.+++.+++++.+|++.+++.++ ++++++++++||||
T Consensus 128 ~al~l~--~~~l~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~---~~~~~i~i~~P~NP 202 (430)
T PLN00145 128 QAIEII--MSVLAQPGANILLPRPGYPLYEARAVFSGLEVRHFDLLPERGWEVDLEGVEALAD---ENTVAMVIINPNNP 202 (430)
T ss_pred HHHHHH--HHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEeeCCcccCCcCCHHHHHHHhC---cCceEEEEeCCCCC
Confidence 999998 3334679999999999999999999999999999998656678999999998886 57789999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecC
Q 012238 242 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 321 (467)
Q Consensus 242 TG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~ 321 (467)
||.+++.+++++|+++|+++|++||+||+|.++.+++. ...++..+ ....++|+++||||.|++||||+||++. ..
T Consensus 203 tG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~--~~~~~~~~-~~~~~vi~~~S~SK~~~~pG~RlG~iv~-~~ 278 (430)
T PLN00145 203 CGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSK--PFVPMGVF-GEVAPVLTLGSISKRWVVPGWRLGWIAT-CD 278 (430)
T ss_pred CCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCCC--Cccchhhh-cccCcEEEEeccccccCCCCeeEEEEEE-ec
Confidence 99999999999999999999999999999999988641 22223222 3346899999999999999999999961 12
Q ss_pred CHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC
Q 012238 322 SSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKS 401 (467)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~ 401 (467)
++.+++. .++...++.... ...+++.+.|.++..+|.+.. .++++++++.++++|+.+.+.|+ +++
T Consensus 279 ~~~~~~~------~~~~~~~~~~~~-~~~~~~~~~Q~a~~~~l~~~~-----~~~~~~~~~~~~~~~~~~~~~L~-~~~- 344 (430)
T PLN00145 279 PNGILKE------TKVVDSIRNYLN-ISTDPATFVQGAIPQIIANTK-----EEFFTKTLGLLKETADICYEKIK-EIK- 344 (430)
T ss_pred chhhhhh------hHHHHHHHHHhc-ccCCCCHHHHHHHHHHHhcCH-----HHHHHHHHHHHHHHHHHHHHHHh-cCC-
Confidence 4444332 001222444332 344677889999988887521 24477889999999999999998 752
Q ss_pred CCCccc-ccCCcceEEecCCC----------HHHHHHHHHcccEEEeCC---C-----eEEeccCChhhHHHHHHHHHHH
Q 012238 402 GKDWSF-ILRQIGMFSFTGLN----------KAQSDNMTNKWHVYMTKD---G-----RISLAGLSLAKCEYLADAIIDS 462 (467)
Q Consensus 402 ~~~~~~-~~~~~g~f~~~~l~----------~~~~~~ll~~~gI~v~~g---g-----Ris~~~~~~~~i~~~~~~l~~~ 462 (467)
+ +.+ ..|+|++|+|++++ .+++.++++++||.+.|| | ||+|+. ++++++.++++|.+.
T Consensus 345 -g-~~~~~~P~ga~y~~v~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~lRis~~~-~~~~l~~al~rl~~~ 421 (430)
T PLN00145 345 -C-ITCPHKPEGSMFVMVKLDLSCLSGIKDDMDFCCKLAKEESVVVLPGSALGMKNWLRITFAI-DPPSLEDGLERLKSF 421 (430)
T ss_pred -C-CCCCcCCCeeeEEEeccChhhcCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeCC-CHHHHHHHHHHHHHH
Confidence 1 444 47999999998652 346778888889999998 2 999997 889999999999998
Q ss_pred HHh
Q 012238 463 YHN 465 (467)
Q Consensus 463 l~~ 465 (467)
+.+
T Consensus 422 ~~~ 424 (430)
T PLN00145 422 CLR 424 (430)
T ss_pred HHH
Confidence 865
No 22
>PLN02656 tyrosine transaminase
Probab=100.00 E-value=3e-47 Score=384.87 Aligned_cols=351 Identities=17% Similarity=0.136 Sum_probs=283.4
Q ss_pred CCCCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCC
Q 012238 80 DTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 159 (467)
Q Consensus 80 ~~~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g 159 (467)
..+.++|+|++|+|--...+++ ++.+++++.+.+.......|.|..|.+++|+++++++...+|..+++++|++ |+|
T Consensus 28 ~~~~~~i~l~~G~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~--t~G 104 (409)
T PLN02656 28 ENGKRVISLGMGDPTAYSCFHT-THVAQEAVVDALQSNKFNGYAPTVGLPQARRAIAEYLSRDLPYKLSLDDVFI--TSG 104 (409)
T ss_pred ccCCeeeecCCCCCCcCCCCCC-CHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCcccEEE--eCC
Confidence 3456899999999811111343 7889999988876554478999999999999999999887788888999999 999
Q ss_pred chhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCC
Q 012238 160 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAH 239 (467)
Q Consensus 160 gt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~ 239 (467)
+++++.++ +...+.+||+|++++|+|+.|...++..|++++.+++.+++++.+|++.+++.++ .+++++++++||
T Consensus 105 ~~~al~~~--~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~---~~~~~v~l~~P~ 179 (409)
T PLN02656 105 CTQAIDVA--LSMLARPGANILLPRPGFPIYELCAAFRHLEVRYVDLLPEKGWEVDLDAVEALAD---QNTVALVIINPG 179 (409)
T ss_pred hHHHHHHH--HHHHhCCCCeEEEeCCCCCcHHHHHHHcCCEEEEEeCCCcCCCCCCHHHHHHHhc---cCceEEEEECCC
Confidence 99999997 4445679999999999999999999999999999998655577899999998886 567888899999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEe
Q 012238 240 NPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVV 319 (467)
Q Consensus 240 NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v 319 (467)
||||.+++.+++++|+++|+++|++||+||+|.++.+++. ...++..+ +...++|+++||||.|++||+|+||++
T Consensus 180 NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~--~~~~~~~~-~~~~~vi~~~SfSK~f~~pGlRiG~~i-- 254 (409)
T PLN02656 180 NPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSN--PFVPMGVF-GSIVPVLTLGSLSKRWIVPGWRLGWFV-- 254 (409)
T ss_pred CCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCC--CcccHHHh-cccCcEEEEcccchhccCcceeEEEEE--
Confidence 9999999999999999999999999999999999988642 11222222 344689999999999999999999996
Q ss_pred cC-------CHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 012238 320 CS-------SSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLF 392 (467)
Q Consensus 320 ~~-------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~ 392 (467)
+. ++++++. +.+.... ..+++.+.|.++..+|++.. ..++++.+++++++|+.+.
T Consensus 255 ~~~~~~~~~~~~~~~~------------~~~~~~~-~~~~s~~~q~a~~~~l~~~~-----~~~~~~~~~~~~~~r~~~~ 316 (409)
T PLN02656 255 TTDPSGSFRDPKIVER------------IKKYFDI-LGGPATFIQAAVPTILEQTD-----ESFFKKTINILKQSSDICC 316 (409)
T ss_pred EeCcccccccHHHHHH------------HHHHHhh-hcCCCHHHHHHHHHHHhcCc-----HHHHHHHHHHHHHHHHHHH
Confidence 33 3466666 5444333 34577889999999987521 2346788889999999999
Q ss_pred HHhhhccCCCCCcc-cccCCcceEEecCCC---------H-HHHHHHHHcccEEEeCCC--------eEEeccCChhhHH
Q 012238 393 DSLSAKDKSGKDWS-FILRQIGMFSFTGLN---------K-AQSDNMTNKWHVYMTKDG--------RISLAGLSLAKCE 453 (467)
Q Consensus 393 ~~l~~~~g~~~~~~-~~~~~~g~f~~~~l~---------~-~~~~~ll~~~gI~v~~gg--------Ris~~~~~~~~i~ 453 (467)
+.|+ .++. +. ...|+||+|+|+.++ . +++.++++++||.+.||. ||+|+. ++++++
T Consensus 317 ~~L~-~~~~---~~~~~~p~gg~~~w~~l~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~fg~~~~iRi~~~~-~~e~l~ 391 (409)
T PLN02656 317 DRIK-EIPC---ITCPHKPEGSMAVMVKLNLSLLEDISDDIDFCFKLAREESVIILPGTAVGLKNWLRITFAA-DPSSLE 391 (409)
T ss_pred HHHh-hCCC---CcCCcCCCeEEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEecchhcCCCCeEEEEeCC-CHHHHH
Confidence 9998 7642 22 357899999998652 2 456677778899999982 999997 899999
Q ss_pred HHHHHHHHHHHhc
Q 012238 454 YLADAIIDSYHNV 466 (467)
Q Consensus 454 ~~~~~l~~~l~~~ 466 (467)
+++++|++++.+.
T Consensus 392 eal~rl~~~~~~~ 404 (409)
T PLN02656 392 EALGRIKSFYLRH 404 (409)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999988753
No 23
>PRK07682 hypothetical protein; Validated
Probab=100.00 E-value=1.9e-47 Score=383.32 Aligned_cols=341 Identities=16% Similarity=0.161 Sum_probs=281.5
Q ss_pred CCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccC-ceeeeecCCch
Q 012238 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQ-RVATVQGLSGT 161 (467)
Q Consensus 83 ~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~-~i~~~~t~ggt 161 (467)
++.|+|+.|.| ..++ ++.+.+++.+.+... ...|.+..|.+++|+++|+++...+|..++++ +|++ |+|++
T Consensus 20 ~~~i~l~~~~~----~~~~-~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~--t~G~~ 91 (378)
T PRK07682 20 EGVISLGVGEP----DFVT-PWNVREASIRSLEQG-YTSYTANAGLLELRQEIAKYLKKRFAVSYDPNDEIIV--TVGAS 91 (378)
T ss_pred CCeEEeCCCCC----CCCC-CHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEE--eCChH
Confidence 47899999998 4443 566788887776543 36798889999999999999987777777775 7999 99999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCC
Q 012238 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 241 (467)
Q Consensus 162 ~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NP 241 (467)
+++.++ +...+.|||+|++++|+|+.|...++..|.+++.++++.++++++|++.+++.+. ++++++++++||||
T Consensus 92 ~al~~~--~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~---~~~~~v~~~~p~NP 166 (378)
T PRK07682 92 QALDVA--MRAIINPGDEVLIVEPSFVSYAPLVTLAGGVPVPVATTLENEFKVQPAQIEAAIT---AKTKAILLCSPNNP 166 (378)
T ss_pred HHHHHH--HHHhCCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCCCCHHHHHhhcC---cccEEEEEECCCCC
Confidence 999997 4445779999999999999999999999999999988544568899999999886 46788888999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecC
Q 012238 242 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 321 (467)
Q Consensus 242 TG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~ 321 (467)
||.+++.+++++|+++|++||+++|+||+|.++.++. ...++..+.+..+++++++||||.|++||+|+||++ +
T Consensus 167 tG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~---~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~---~ 240 (378)
T PRK07682 167 TGAVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDE---AYTSFASIKGMRERTILISGFSKGFAMTGWRLGFIA---A 240 (378)
T ss_pred cCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCC---CCCChhhcccccCCEEEEecCcccccChhhhhhhhh---c
Confidence 9999999999999999999999999999999998863 112232333334689999999999999999999995 7
Q ss_pred CHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC
Q 012238 322 SSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKS 401 (467)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~ 401 (467)
++++++. +.........+++.+.|.++..+|++.. .++++.++.++++|+.+.+.|+ ++|
T Consensus 241 ~~~~i~~------------l~~~~~~~~~~~~~~~q~a~~~~l~~~~------~~~~~~~~~~~~~~~~~~~~L~-~~~- 300 (378)
T PRK07682 241 PVYFSEA------------MLKIHQYSMMCAPTMAQFAALEALRAGN------DDVIRMRDSYRKRRNFFVTSFN-EIG- 300 (378)
T ss_pred CHHHHHH------------HHHHHHhhccCCCHHHHHHHHHHHhCCh------HHHHHHHHHHHHHHHHHHHHHH-HCC-
Confidence 8888887 5444443445678889999998887642 2367888999999999999999 876
Q ss_pred CCCcccccCCcceEEecCC-----C-HHHHHHHHHcccEEEeCC--------C--eEEeccCChhhHHHHHHHHHHHHHh
Q 012238 402 GKDWSFILRQIGMFSFTGL-----N-KAQSDNMTNKWHVYMTKD--------G--RISLAGLSLAKCEYLADAIIDSYHN 465 (467)
Q Consensus 402 ~~~~~~~~~~~g~f~~~~l-----~-~~~~~~ll~~~gI~v~~g--------g--Ris~~~~~~~~i~~~~~~l~~~l~~ 465 (467)
+.+..|+||+|+|..+ + .++.+++++++||.+.|| + |||++. +++++++++++|++++++
T Consensus 301 ---~~~~~p~g~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~iRis~~~-~~~~l~~~l~~l~~~l~~ 376 (378)
T PRK07682 301 ---LTCHVPGGAFYAFPSISSTGLSSEEFAEQLLLEEKVAVVPGSVFGESGEGFIRCSYAT-SLEQLQEAMKRMKRFVEN 376 (378)
T ss_pred ---CccCCCCeeEEEEEeccCCCCCHHHHHHHHHHhCCEEEcCchhhCcCCCCeEEEEeCC-CHHHHHHHHHHHHHHHhh
Confidence 5677899999999743 3 345667777789999987 1 999998 789999999999999886
Q ss_pred c
Q 012238 466 V 466 (467)
Q Consensus 466 ~ 466 (467)
+
T Consensus 377 ~ 377 (378)
T PRK07682 377 K 377 (378)
T ss_pred c
Confidence 5
No 24
>PRK06348 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2e-47 Score=383.60 Aligned_cols=353 Identities=14% Similarity=0.156 Sum_probs=281.3
Q ss_pred CCCcccchHHHhhcCCCCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCc
Q 012238 66 PPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNS 145 (467)
Q Consensus 66 ~~~~i~~~~~~~~~~~~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~ 145 (467)
....+.++.+..+. .+++|||+.|.| ..++ ++.+.++........ ...|.+..|.++||+++++++...++.
T Consensus 14 ~~~~~~~~~~~~~~--~~~~i~l~~g~p----~~~~-~~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~~~~~~~~ 85 (384)
T PRK06348 14 EVNIMAEIATLAKK--FPDIIDLSLGDP----DLIT-DESIINAAFEDAKKG-HTRYTDSGGDVELIEEIIKYYSKNYDL 85 (384)
T ss_pred CccHHHHHHHHHHh--cCCcEEcCCCCC----CCCC-CHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHHHHHHhCC
Confidence 33344444444332 247899999988 4444 555655444433333 377999999999999999999877788
Q ss_pred ccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHc
Q 012238 146 VLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKA 225 (467)
Q Consensus 146 ~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~ 225 (467)
.+++++|++ |+|+++++.++ +...+.+||+|++++|+|..|...++..|++++.+++.+++++.+|++.+++.++
T Consensus 86 ~~~~~~i~i--t~G~~~al~~~--~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~- 160 (384)
T PRK06348 86 SFKRNEIMA--TVGACHGMYLA--LQSILDPGDEVIIHEPYFTPYKDQIEMVGGKPIILETYEEDGFQINVKKLEALIT- 160 (384)
T ss_pred CCChhhEEE--cCChHHHHHHH--HHHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEecCCcCcCCcCCHHHHHHhhC-
Confidence 888999999 99999999998 4445779999999999999999999999999999987655677899999999886
Q ss_pred CCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccC
Q 012238 226 APGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKN 305 (467)
Q Consensus 226 ~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 305 (467)
++++++++++||||||.+++.+++++|+++|+++|++||+||+|.++.++. ...++..+....+++|+++||||.
T Consensus 161 --~~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~---~~~~~~~~~~~~~~vi~~~SfSK~ 235 (384)
T PRK06348 161 --SKTKAIILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYE---DFVPMATLAGMPERTITFGSFSKD 235 (384)
T ss_pred --cCccEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCC---CccchhhcCCCcCcEEEEecchhc
Confidence 466788889999999999999999999999999999999999999998763 122232332235689999999999
Q ss_pred cccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHH
Q 012238 306 LGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIK 385 (467)
Q Consensus 306 ~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~ 385 (467)
+++||+|+||++ +++++++. +.........+++.+.|.++..+|.+. ++++++.++.++
T Consensus 236 ~~l~GlRiG~~v---~~~~~~~~------------~~~~~~~~~~~~~~~~q~~~~~~l~~~------~~~~~~~~~~~~ 294 (384)
T PRK06348 236 FAMTGWRIGYVI---APDYIIET------------AKIINEGICFSAPTISQRAAIYALKHR------DTIVPLIKEEFQ 294 (384)
T ss_pred cCCccccceeee---cCHHHHHH------------HHHHHHhccCCCCHHHHHHHHHHHhCc------HHHHHHHHHHHH
Confidence 999999999996 67877777 665555545567888999998888653 344678889999
Q ss_pred HHHHHHHHHhhhccCCCCCcccccCCcceEEecCC-----C-HHHHHHHHHcccEEEeCCC----------eEEeccCCh
Q 012238 386 NVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL-----N-KAQSDNMTNKWHVYMTKDG----------RISLAGLSL 449 (467)
Q Consensus 386 ~~r~~l~~~l~~~~g~~~~~~~~~~~~g~f~~~~l-----~-~~~~~~ll~~~gI~v~~gg----------Ris~~~~~~ 449 (467)
++++.+.+.|+ .++ + +.+..|+||||+|+.+ + .++++.+++++||.+.||. ||+++. ++
T Consensus 295 ~r~~~~~~~L~-~~~--~-~~~~~p~gg~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~ 369 (384)
T PRK06348 295 KRLEYAYKRIE-SIP--N-LSLHPPKGSIYAFINIKKTGLSSVEFCEKLLKEAHVLVIPGKAFGESGEGYIRLACTV-GI 369 (384)
T ss_pred HHHHHHHHHHh-cCC--C-ceeccCCeeEEEEEecccCCCCHHHHHHHHHHhCCEEEcCchhhccCCCCeEEEEecC-CH
Confidence 99999999998 753 1 5777899999999754 2 3456777777899999872 999986 88
Q ss_pred hhHHHHHHHHHHH
Q 012238 450 AKCEYLADAIIDS 462 (467)
Q Consensus 450 ~~i~~~~~~l~~~ 462 (467)
++++.++++|+++
T Consensus 370 ~~l~~al~~l~~~ 382 (384)
T PRK06348 370 EVLEEAFNRIEKM 382 (384)
T ss_pred HHHHHHHHHHHhh
Confidence 9999999998764
No 25
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=100.00 E-value=2.9e-47 Score=382.83 Aligned_cols=340 Identities=19% Similarity=0.166 Sum_probs=274.8
Q ss_pred CCCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccC-ceeeeecCC
Q 012238 81 TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQ-RVATVQGLS 159 (467)
Q Consensus 81 ~~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~-~i~~~~t~g 159 (467)
.++++|+|+.|.| ..++ ++.+.+++.+.+.......|.+..|.++||+++++++...+|..++++ +|++ |+|
T Consensus 29 ~~~~~i~l~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~ii~--t~G 101 (385)
T PRK09276 29 RGVDVISLGIGDP----DLPT-PDHIIEAMCKAVEDPENHQYPSYEGMLEFRKAVADWYKRRFGVELDPETEVIS--LIG 101 (385)
T ss_pred cCCCEEEecCCCC----CCCC-CHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEE--ccC
Confidence 3467999999987 4443 678888888877543346798889999999999999987777777776 5888 999
Q ss_pred chhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCC
Q 012238 160 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAH 239 (467)
Q Consensus 160 gt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~ 239 (467)
+++++.++ +...+.+||+|++++|+|+.|...++..|++++.++++++.++.+|++.+++.+. .+++++++++||
T Consensus 102 ~~~~i~~~--~~~~~~~gd~Vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~g~~~d~~~l~~~~~---~~~~~v~l~~p~ 176 (385)
T PRK09276 102 SKEGIAHI--PLAFVNPGDVVLVPDPGYPVYKIGTIFAGGEPYFMPLKEENGFLPDLDAIPEDVA---KKAKLMFINYPN 176 (385)
T ss_pred cHHHHHHH--HHHhCCCCCEEEEcCCCCcChHHHHHHcCCEEEEEecCCCCCCcCCHHHHHHhcc---ccceEEEEeCCC
Confidence 99999997 3344679999999999999999999999999999998655567789999988776 467889999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEe
Q 012238 240 NPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVV 319 (467)
Q Consensus 240 NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v 319 (467)
||||.+++.+++++|+++|++||++||+||+|.++.+++. ...++..+....+++|+++||||.||++|+|+||++
T Consensus 177 NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~--~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~i-- 252 (385)
T PRK09276 177 NPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGY--KPPSFLEVPGAKDVGIEFHSLSKTYNMTGWRIGFAV-- 252 (385)
T ss_pred CCCCCCCCHHHHHHHHHHHHHCCcEEEEecchhheecCCC--CCCChhccCCCcCCEEEEecchhhcCCcchhheeee--
Confidence 9999999999999999999999999999999999987531 122222222223578999999999999999999995
Q ss_pred cCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 012238 320 CSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD 399 (467)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~ 399 (467)
+++++++. +.+.......+++...|.++..+|.+. ..++++.+++++++|+.+.+.|+ +.
T Consensus 253 -~~~~l~~~------------~~~~~~~~~~~~~~~~q~~~~~~l~~~------~~~~~~~~~~~~~~~~~l~~~L~-~~ 312 (385)
T PRK09276 253 -GNADLIAG------------LGKVKSNVDSGVFQAIQEAGIAALNGP------QEVVEELRKIYQERRDILVEGLR-KL 312 (385)
T ss_pred -CCHHHHHH------------HHHHHhhccCCCCHHHHHHHHHHHcCc------HHHHHHHHHHHHHHHHHHHHHHH-hC
Confidence 78888887 555444444556677888888888652 34467888999999999999999 77
Q ss_pred CCCCCcccccCCcceEEecCCC-----HHHHHHHHHcccEEEeCC--------C--eEEeccCChhhHHHHHHHHHH
Q 012238 400 KSGKDWSFILRQIGMFSFTGLN-----KAQSDNMTNKWHVYMTKD--------G--RISLAGLSLAKCEYLADAIID 461 (467)
Q Consensus 400 g~~~~~~~~~~~~g~f~~~~l~-----~~~~~~ll~~~gI~v~~g--------g--Ris~~~~~~~~i~~~~~~l~~ 461 (467)
+ +.+..+++|+|+|+.+. .++++++++++||.+.|| + ||+|+. +++++..++++|.+
T Consensus 313 ~----~~~~~~~~~~~~~v~~~~~~~~~~l~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~~-~~~~l~~~l~~l~~ 384 (385)
T PRK09276 313 G----LEVEPPKATFYVWAPVPKGYTSAEFATLLLDKAGVVVTPGNGFGEYGEGYFRIALTV-PDERIEEAVERIKK 384 (385)
T ss_pred C----CcccCCCcceEEEEECCCCCCHHHHHHHHHHhCCEEECCchhhCCCCCCeEEEEeCC-CHHHHHHHHHHHhh
Confidence 6 56778889999998652 355778887789999997 2 999986 78888888888764
No 26
>PRK09148 aminotransferase; Validated
Probab=100.00 E-value=4.6e-47 Score=383.07 Aligned_cols=344 Identities=16% Similarity=0.159 Sum_probs=275.4
Q ss_pred CCCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccC-ceeeeecCC
Q 012238 81 TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQ-RVATVQGLS 159 (467)
Q Consensus 81 ~~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~-~i~~~~t~g 159 (467)
.++++|+|+.|.| ..++ ++.+.+++.+.+.......|.+..|.++||+++|+++...+|..++++ +|++ |+|
T Consensus 28 ~~~~~i~l~~~~p----~~~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~i--t~G 100 (405)
T PRK09148 28 AGADIIDLGMGNP----DLPT-PQHIVDKLCETAQDPRTHRYSASKGIPGLRRAQAAYYARRFGVKLNPDTQVVA--TLG 100 (405)
T ss_pred cCCCeEEcCCCCC----CCCC-CHHHHHHHHHHHcCcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEE--cCC
Confidence 3457899999987 4444 677788887776443347899999999999999999977667777887 8999 999
Q ss_pred chhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCC
Q 012238 160 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAH 239 (467)
Q Consensus 160 gt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~ 239 (467)
+++++.++ +...+.+||+|++++|+|+.|...++..|++++.++++++..+ ++.+++.++...++++++++++||
T Consensus 101 ~~~al~~~--~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~---~~~l~~~~~~~~~~~~~v~l~~P~ 175 (405)
T PRK09148 101 SKEGFANM--AQAITAPGDVILCPNPSYPIHAFGFIMAGGVIRSVPAEPDEEF---FPALERAVRHSIPKPIALIVNYPS 175 (405)
T ss_pred hHHHHHHH--HHHhcCCCCEEEEcCCCCcccHHHHHhcCCEEEEEeCCCCCCC---ccCHHHHHhhccccceEEEEeCCC
Confidence 99999998 3445679999999999999999999999999999998644333 344555554333577899999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEe
Q 012238 240 NPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVV 319 (467)
Q Consensus 240 NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v 319 (467)
||||.+++.+++++|+++|++||++||+||+|.++.++.. ...++..+....+++++++||||.|++||+|+||++
T Consensus 176 NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~--~~~s~~~~~~~~~~~i~~~SfSK~~~~pGlR~G~~v-- 251 (405)
T PRK09148 176 NPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGN--PPPSVLQVPGAKDVTVEFTSMSKTFSMAGWRMGFAV-- 251 (405)
T ss_pred CCCCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCC--CCCChhhCCCccCcEEEEeccccccCCcchheeeee--
Confidence 9999999999999999999999999999999999987531 112222221223468899999999999999999996
Q ss_pred cCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 012238 320 CSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD 399 (467)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~ 399 (467)
+++++++. +.+.......+++.+.|.++..+|++. .+++++.++.++++|+.+.+.|+ ++
T Consensus 252 -~~~~~i~~------------l~~~~~~~~~~~~~~~q~~~~~~L~~~------~~~~~~~~~~~~~~r~~l~~~L~-~~ 311 (405)
T PRK09148 252 -GNERLIAA------------LTRVKSYLDYGAFTPIQVAATAALNGP------QDCIAEMRELYKKRRDVLVESFG-RA 311 (405)
T ss_pred -CCHHHHHH------------HHHHHHHhccCCChHHHHHHHHHHhCc------HHHHHHHHHHHHHHHHHHHHHHH-Hc
Confidence 78888887 655555444566778899999888754 24477889999999999999999 77
Q ss_pred CCCCCcccccCCcceEEecCCC--------HHHHHHHHHcccEEEeCC--------C--eEEeccCChhhHHHHHHHHHH
Q 012238 400 KSGKDWSFILRQIGMFSFTGLN--------KAQSDNMTNKWHVYMTKD--------G--RISLAGLSLAKCEYLADAIID 461 (467)
Q Consensus 400 g~~~~~~~~~~~~g~f~~~~l~--------~~~~~~ll~~~gI~v~~g--------g--Ris~~~~~~~~i~~~~~~l~~ 461 (467)
+ +.+..|++|+|+|+.+. .++++.+++++||.+.|| + ||+++. +.+++++++++|.+
T Consensus 312 ~----~~~~~p~~g~f~~~~l~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ri~~~~-~~~~l~~al~~l~~ 386 (405)
T PRK09148 312 G----WDIPPPAASMFAWAPIPEAFRHLGSLEFSKLLVEKADVAVAPGVGFGEHGDGYVRIALVE-NEQRIRQAARNIKR 386 (405)
T ss_pred C----CccCCCCeeEEEEEECCCccCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecC-CHHHHHHHHHHHHH
Confidence 6 56677899999998652 355677787789999997 1 999985 88999999999998
Q ss_pred HHHh
Q 012238 462 SYHN 465 (467)
Q Consensus 462 ~l~~ 465 (467)
++++
T Consensus 387 ~l~~ 390 (405)
T PRK09148 387 FLSS 390 (405)
T ss_pred HHHH
Confidence 8764
No 27
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=100.00 E-value=3.9e-47 Score=381.70 Aligned_cols=340 Identities=19% Similarity=0.161 Sum_probs=275.6
Q ss_pred CCCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccC-ceeeeecCC
Q 012238 81 TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQ-RVATVQGLS 159 (467)
Q Consensus 81 ~~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~-~i~~~~t~g 159 (467)
.++++++|+.|.| ..++ ++.+.+++.+.+.......|.+..|.++||+++++++...+|..++++ +|++ |+|
T Consensus 27 ~~~~~~~l~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~vi~--t~G 99 (383)
T TIGR03540 27 EGVDVISLGIGDP----DLPT-PKHIVEALCKAAENPENHRYPSYEGMLAYRQAVADWYKRRFGVELDPETEVLS--LIG 99 (383)
T ss_pred cCCCeEEeCCCCC----CCCC-CHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCeEEE--CCC
Confidence 4568999999988 4444 778888888876543347898889999999999999987777777776 6888 999
Q ss_pred chhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCC
Q 012238 160 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAH 239 (467)
Q Consensus 160 gt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~ 239 (467)
+++++.++ +...+.+||+|++++|+|+.|...++..|++++.+|++++.++.+|++.+++.+. .+++++++++||
T Consensus 100 ~~~~l~~~--~~~~~~~gd~vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~g~~~d~~~l~~~~~---~~~~~v~i~~P~ 174 (383)
T TIGR03540 100 SKEGIAHI--PLAFVNPGDIVLVPDPGYPVYRIGTLFAGGEPYEMPLKEENGFLPDFDAIPEDIA---KKAKLMFINYPN 174 (383)
T ss_pred cHHHHHHH--HHHhCCCCCEEEEeCCCCcchHHHHHhcCCEEEEEecCcccCCccCHHHHHhhcc---ccceEEEEeCCC
Confidence 99999998 3444679999999999999999999999999999999655567789999998886 467899999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEe
Q 012238 240 NPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVV 319 (467)
Q Consensus 240 NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v 319 (467)
||||.+++.+++++|+++|++||++||+||+|.++.+++. ...++..+....+++|+++||||.||++|+|+||++
T Consensus 175 NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~--~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~i-- 250 (383)
T TIGR03540 175 NPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGY--KAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIGMAV-- 250 (383)
T ss_pred CCcCccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCC--CCcCcccCCCcccCEEEEEecccccCCccceeeEEe--
Confidence 9999999999999999999999999999999999887531 122222221123578999999999999999999995
Q ss_pred cCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 012238 320 CSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD 399 (467)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~ 399 (467)
+++++++. +.........+++...|.++..+|.+. .+++++.++.++++++.+.+.|+ +.
T Consensus 251 -~~~~l~~~------------~~~~~~~~~~~~~~~~q~~~~~~l~~~------~~~~~~~~~~~~~~~~~~~~~L~-~~ 310 (383)
T TIGR03540 251 -GNADLIAG------------LGKVKTNVDSGVFQAIQYAAIAALNGP------QDVVKEIRKIYQRRRDLLLEALK-KI 310 (383)
T ss_pred -CCHHHHHH------------HHHHHHhcccCCChHHHHHHHHHHhCC------HHHHHHHHHHHHHHHHHHHHHHH-hC
Confidence 78888887 544444444566777888888888764 23467788999999999999999 87
Q ss_pred CCCCCcccccCCcceEEecCCC-----HHHHHHHHHcccEEEeCC--------C--eEEeccCChhhHHHHHHHHHH
Q 012238 400 KSGKDWSFILRQIGMFSFTGLN-----KAQSDNMTNKWHVYMTKD--------G--RISLAGLSLAKCEYLADAIID 461 (467)
Q Consensus 400 g~~~~~~~~~~~~g~f~~~~l~-----~~~~~~ll~~~gI~v~~g--------g--Ris~~~~~~~~i~~~~~~l~~ 461 (467)
| +.+..+++|+|+|+.+. .++++++++++||.+.+| + ||+++. ++++++.++++|.+
T Consensus 311 ~----~~~~~~~~~~~~~~~l~~~~~~~~~~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~~-~~~~l~~~l~~l~~ 382 (383)
T TIGR03540 311 G----IDVEKPKATFYVWVPVPEGYTSAEFAARLLEETGVVVTPGVGFGEYGEGYIRISLTV-PDERLEEAVARIKK 382 (383)
T ss_pred C----CEecCCCcceEEEEECCCCCCHHHHHHHHHHHCCEEEecchhhCccCCCeEEEEecC-CHHHHHHHHHHHhh
Confidence 6 57778889999998652 455777777789999987 2 999986 77888888887764
No 28
>PRK08960 hypothetical protein; Provisional
Probab=100.00 E-value=3.6e-47 Score=382.27 Aligned_cols=356 Identities=17% Similarity=0.200 Sum_probs=288.1
Q ss_pred CCCCCcccchHHHhhc--CCCCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhC
Q 012238 64 MAPPDPILGVSEAFKA--DTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFG 141 (467)
Q Consensus 64 ~~~~~~i~~~~~~~~~--~~~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~ 141 (467)
...+..+.++.+...+ ..++++|+|+.|.| .+++ ++.+.+++.+.+... ...|.+..|.+++|+++|+++..
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~----~~~~-~~~v~~a~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~ 84 (387)
T PRK08960 11 DIEPFHVMALLARANELEAAGHDVIHLEIGEP----DFTT-AEPIVAAGQAALAAG-HTRYTAARGLPALREAIAGFYAQ 84 (387)
T ss_pred hCCchHHHHHHHHHHHHHhcCCCeEEeCCCCC----CCCC-CHHHHHHHHHHHhcC-CCccCCCCCCHHHHHHHHHHHHH
Confidence 3344555555544331 23457899999998 5554 788999998887643 36798999999999999999987
Q ss_pred CCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHH
Q 012238 142 ADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIA 221 (467)
Q Consensus 142 ~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~ 221 (467)
.+|..+++++|++ |+|+++++.++ +...+.|||+|++++|+|+.+...++..|++++.++++++.++.+|++.+++
T Consensus 85 ~~g~~~~~~~i~i--t~G~~~al~~~--~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~ 160 (387)
T PRK08960 85 RYGVDVDPERILV--TPGGSGALLLA--SSLLVDPGKHWLLADPGYPCNRHFLRLVEGAAQLVPVGPDSRYQLTPALVER 160 (387)
T ss_pred HhCCCCChhhEEE--ccCcHHHHHHH--HHHhcCCCCEEEEcCCCCcchHHHHHhcCCeEEEEecCcccCCCCCHHHHHH
Confidence 7788888999999 99999999998 3344679999999999999999999999999999998655567899999999
Q ss_pred HHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEec
Q 012238 222 DIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQS 301 (467)
Q Consensus 222 ~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S 301 (467)
.++ ++++++++++||||||.+++.+++++|+++|+++|++||+||+|.++.+++ ...++ ....+++++++|
T Consensus 161 ~~~---~~~~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~---~~~~~---~~~~~~vi~~~S 231 (387)
T PRK08960 161 HWN---ADTVGALVASPANPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGV---DAASV---LEVDDDAFVLNS 231 (387)
T ss_pred HhC---ccceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCC---CCCCh---hhccCCEEEEee
Confidence 887 567788899999999999999999999999999999999999999998753 11122 233468999999
Q ss_pred CccCcccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHH
Q 012238 302 YSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMA 381 (467)
Q Consensus 302 ~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~ 381 (467)
|||.||++|+|+||++ +++++++. +.........+++.+.|.++..+|.+. . .+++++.+
T Consensus 232 ~SK~~g~~GlRiG~~~---~~~~~~~~------------~~~~~~~~~~~~s~~~q~a~~~~l~~~-~----~~~l~~~~ 291 (387)
T PRK08960 232 FSKYFGMTGWRLGWLV---APPAAVPE------------LEKLAQNLYISASTPAQHAALACFEPE-T----LAILEARR 291 (387)
T ss_pred cccccCCcccEEEEEE---cCHHHHHH------------HHHHHhhhccCCCHHHHHHHHHHhhcC-c----HHHHHHHH
Confidence 9999999999999996 77888777 665555555677888999888888642 1 34577889
Q ss_pred HHHHHHHHHHHHHhhhccCCCCCccc-ccCCcceEEecCC-----C-HHHHHHHHHcccEEEeCC---------C--eEE
Q 012238 382 GRIKNVRQKLFDSLSAKDKSGKDWSF-ILRQIGMFSFTGL-----N-KAQSDNMTNKWHVYMTKD---------G--RIS 443 (467)
Q Consensus 382 ~~~~~~r~~l~~~l~~~~g~~~~~~~-~~~~~g~f~~~~l-----~-~~~~~~ll~~~gI~v~~g---------g--Ris 443 (467)
+.++++|+.+.+.|+ +.|+ .. ..|.+|+|+|+++ + .++++++++++||.+.|| + ||+
T Consensus 292 ~~~~~~~~~l~~~L~-~~~~----~~~~~p~g~~f~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~iRi~ 366 (387)
T PRK08960 292 AEFARRRDFLLPALR-ELGF----GIAVEPQGAFYLYADISAFGGDAFAFCRHFLETEHVAFTPGLDFGRHQAGQHVRFA 366 (387)
T ss_pred HHHHHHHHHHHHHHH-hcCC----cCCcCCCeeEEEEEeccccCCCHHHHHHHHHHhCCEEEcCchHhCCCCCCCeEEEE
Confidence 999999999999999 7763 33 4688999999864 2 345667787789999987 1 999
Q ss_pred eccCChhhHHHHHHHHHHHHH
Q 012238 444 LAGLSLAKCEYLADAIIDSYH 464 (467)
Q Consensus 444 ~~~~~~~~i~~~~~~l~~~l~ 464 (467)
++. +.++++.++++|.++++
T Consensus 367 ~~~-~~~~l~~al~~l~~~~~ 386 (387)
T PRK08960 367 YTQ-SLPRLQEAVERIARGLR 386 (387)
T ss_pred ecC-CHHHHHHHHHHHHHHHh
Confidence 998 77889999988888764
No 29
>PLN02231 alanine transaminase
Probab=100.00 E-value=1.5e-46 Score=387.48 Aligned_cols=354 Identities=16% Similarity=0.158 Sum_probs=276.8
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhc--C-CCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecC
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER--G-ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGL 158 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~--~-~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ 158 (467)
.++.|+|+.|.+ .+| .+.+.++. +.+.. + ....|.+..|.++||+++|+++...+|..+++++|++ |+
T Consensus 128 ~p~~i~~~~~~~----~fp--~~~i~~a~-~~l~~~~~~~~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~pe~I~i--T~ 198 (534)
T PLN02231 128 HPSLLDKSETHG----LFS--ADAIERAW-QILDQIPGRATGAYSHSQGIKGLRDAIAAGIEARDGFPADPNDIFL--TD 198 (534)
T ss_pred CCccCCCCCccc----cCC--HHHHHHHH-HHHHhcCCccccCcCCCCCcHHHHHHHHHHHHhccCCCCCcccEEE--eC
Confidence 368899986554 444 34444444 45432 2 3467999999999999999999888898999999999 99
Q ss_pred CchhHHHHHHHHHHHhC-CCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCC---CCcEEEE
Q 012238 159 SGTGSLRLAAALIERYF-PGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP---GGSFILL 234 (467)
Q Consensus 159 ggt~al~l~~~~l~~~~-~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~---~~~~~i~ 234 (467)
|+++++.++ +...+. +||.|+++.|+|+.|...++..|++++.++++++++|++|++.|++.+++.. .++++++
T Consensus 199 Ga~~ai~~~--~~~l~~~~gd~Vli~~P~Y~~y~~~~~~~g~~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~iv 276 (534)
T PLN02231 199 GASPAVHMM--MQLLIRSEKDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLEISELKKQLEDARSKGITVRALV 276 (534)
T ss_pred CHHHHHHHH--HHHhccCCCCEEEEeCCCChhHHHHHHHcCCEEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEE
Confidence 999999997 333353 7999999999999999999999999999999766678999999999987421 2578888
Q ss_pred eCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHh------cCCeEEEEecCccCc-c
Q 012238 235 HGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT------RGMELLVAQSYSKNL-G 307 (467)
Q Consensus 235 i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~------~~~~~i~~~S~SK~~-~ 307 (467)
++|||||||.+++.+++++|+++|++||++||+||+|+++.|++. ....++..+.. ...++++++||||.+ +
T Consensus 277 l~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~-~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g 355 (534)
T PLN02231 277 VINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQENVYVPD-KKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYG 355 (534)
T ss_pred EeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCC-CCcccHHHHHhhhccccCCceEEEEeccCccccc
Confidence 899999999999999999999999999999999999999998521 12223333321 123699999999975 8
Q ss_pred cCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCCh----hhHHHHHHHHHHHHHH
Q 012238 308 LYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNP----ALFDEWKAEMEMMAGR 383 (467)
Q Consensus 308 ~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~----~~~~~~~~~l~~~~~~ 383 (467)
+||+|+||+++...++++++. +.+... ...+++...|.++..+++.+ ..++.|.++.+.+++.
T Consensus 356 ~pGlRiGy~~~~~~~~~l~~~------------l~k~~~-~~~~s~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~ 422 (534)
T PLN02231 356 ECGKRGGYMEVTGFTSDVREQ------------IYKVAS-VNLCSNISGQILASLVMSPPKPGDESYESYMAEKDGILSS 422 (534)
T ss_pred CCccceEEEEEecCCHHHHHH------------HHHHHh-hhcCCChHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHH
Confidence 999999999632237778777 444433 23456677888888888653 2334445556778899
Q ss_pred HHHHHHHHHHHhhhccCCCCCcccccCCcceEEecCC--C--------------H-HHHHHHHHcccEEEeCC-------
Q 012238 384 IKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL--N--------------K-AQSDNMTNKWHVYMTKD------- 439 (467)
Q Consensus 384 ~~~~r~~l~~~l~~~~g~~~~~~~~~~~~g~f~~~~l--~--------------~-~~~~~ll~~~gI~v~~g------- 439 (467)
|+++++.+.+.|+ ++. ++.+.+|+||||+|.++ . . .++.++++++||.++||
T Consensus 423 ~~~r~~~l~~~L~-~~~---gi~~~~p~Ggfylw~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~~~ 498 (534)
T PLN02231 423 LARRAKTLEDALN-SLE---GVTCNKAEGAMYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQVP 498 (534)
T ss_pred HHHHHHHHHHHHh-cCC---CceecCCCeeeEEeccccCcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCcccCCCC
Confidence 9999999999998 762 26888999999999543 2 1 13567888889999998
Q ss_pred C----eEEeccCChhhHHHHHHHHHHHHHh
Q 012238 440 G----RISLAGLSLAKCEYLADAIIDSYHN 465 (467)
Q Consensus 440 g----Ris~~~~~~~~i~~~~~~l~~~l~~ 465 (467)
| |++|.. ++++++.++++|.+.+++
T Consensus 499 g~~~~Rit~~~-~~e~l~eal~RL~~~~~~ 527 (534)
T PLN02231 499 GTWHFRCTILP-QEDKIPAIVSRLTEFHKS 527 (534)
T ss_pred CCCeEEEEeCC-CHHHHHHHHHHHHHHHHH
Confidence 1 999976 889999999999988765
No 30
>PRK06290 aspartate aminotransferase; Provisional
Probab=100.00 E-value=6.2e-47 Score=381.55 Aligned_cols=342 Identities=15% Similarity=0.123 Sum_probs=278.5
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcc-cccC-ceeeeecCC
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSV-LKEQ-RVATVQGLS 159 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~-~~~~-~i~~~~t~g 159 (467)
+.++|+|++|+| ...+ ++.+.+++.+.+.......|+ ..|.++||+++|+++...+|.. ++++ +|++ |+|
T Consensus 43 ~~~~i~L~~g~p----~~~~-~~~~~~~l~~~~~~~~~~~Y~-~~G~~~lr~aia~~~~~~~g~~~~~~~~~I~i--t~G 114 (410)
T PRK06290 43 DMELIDMGVGEP----DEMA-DESVVEVLCEEAKKPENRGYA-DNGIQEFKEAAARYMEKVFGVKDIDPVTEVIH--SIG 114 (410)
T ss_pred CCCeEEcCCCCC----CCCC-CHHHHHHHHHHHhCCCCCCCC-CCCcHHHHHHHHHHHHHHcCCCcCCCcceEEE--ccC
Confidence 346899999998 4443 677888887765433335685 5899999999999998777877 8886 7999 999
Q ss_pred chhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCC
Q 012238 160 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAH 239 (467)
Q Consensus 160 gt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~ 239 (467)
+++++.++ +...+.+||.|+++.|+|+.|...++..|++++.++++++.++.+|++.+++.+. .+++++++++||
T Consensus 115 s~~al~~~--~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~---~~~k~i~l~nP~ 189 (410)
T PRK06290 115 SKPALAML--PSCFINPGDVTLMTVPGYPVTGTHTKYYGGEVYNLPLLEENNFLPDLDSIPKDIK---EKAKLLYLNYPN 189 (410)
T ss_pred HHHHHHHH--HHHhCCCCCEEEEeCCCCccHHHHHHHcCCEEEEEecCCCcCCcCCHHHHHHhhc---ccceEEEEECCC
Confidence 99999997 3444679999999999999999999999999999999755567889999998886 467899999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEe
Q 012238 240 NPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVV 319 (467)
Q Consensus 240 NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v 319 (467)
||||.+++.+++++|+++|++||++||+||+|.++.+++. ..+...+....+++|+++||||.||+||+|+||++
T Consensus 190 NPTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~---~~s~~~~~~~~~~~I~i~SfSK~~g~~GlRiG~ii-- 264 (410)
T PRK06290 190 NPTGAVATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGK---PLSFLSVPGAKEVGVEIHSLSKAYNMTGWRLAFVV-- 264 (410)
T ss_pred CCCCcCCCHHHHHHHHHHHHHcCeEEEEecchhhceeCCC---CcChhcCCCccccEEEEeechhhcCCchhheEeEE--
Confidence 9999999999999999999999999999999999987531 11222222233578999999999999999999996
Q ss_pred cCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 012238 320 CSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD 399 (467)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~ 399 (467)
+++++++. +.........+++.+.|.++..+|.++. .+++.+++++++++.+.+.|+ +.
T Consensus 265 -~~~~l~~~------------l~~~~~~~~~~~~~~~q~aa~~~l~~~~-------~~~~~~~~~~~~~~~l~~~L~-~~ 323 (410)
T PRK06290 265 -GNELIVKA------------FATVKDNNDSGQFIAIQKAGIYALDHPE-------ITEKIREKYSRRLDKLVKILN-EV 323 (410)
T ss_pred -eCHHHHHH------------HHHHHhccccCCcHHHHHHHHHHhhCcH-------HHHHHHHHHHHHHHHHHHHHH-hC
Confidence 78888887 6655555555677788999988887753 256788899999999999999 87
Q ss_pred CCCCCcccccCCcceEEecCCC------------HHHHHHHHHcccEEEeCCC------eEEeccC--ChhhHHHHHHHH
Q 012238 400 KSGKDWSFILRQIGMFSFTGLN------------KAQSDNMTNKWHVYMTKDG------RISLAGL--SLAKCEYLADAI 459 (467)
Q Consensus 400 g~~~~~~~~~~~~g~f~~~~l~------------~~~~~~ll~~~gI~v~~gg------Ris~~~~--~~~~i~~~~~~l 459 (467)
| +.+.+|+||||+|+.+. .+++++|+++.+|.+.||. ||+++.. ++++.++++++|
T Consensus 324 g----~~~~~p~g~f~l~v~lp~~~~~~~~~~~~~~~~~~Ll~~~~v~~~p~~~~~~~lRi~~~~~~~~~~~~~~~~~~l 399 (410)
T PRK06290 324 G----FKAEMPGGTFYLYVKAPKGTKSGIKFENAEEFSQYLIKEKLISTVPWDDAGHFLRFSVTFEAKDEEEEDRILEEI 399 (410)
T ss_pred C----CeecCCCeeeEEEEECCCccccCCCCCCHHHHHHHHHHhCCEEEECCccccCeEEEEEEcccccccchhHHHHHH
Confidence 6 57778999999997542 2557788887778888862 9999842 668999999999
Q ss_pred HHHHHhc
Q 012238 460 IDSYHNV 466 (467)
Q Consensus 460 ~~~l~~~ 466 (467)
.+.+.++
T Consensus 400 ~~~~~~~ 406 (410)
T PRK06290 400 KRRLSDV 406 (410)
T ss_pred HHHHhhc
Confidence 9998765
No 31
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=100.00 E-value=1.1e-46 Score=380.41 Aligned_cols=365 Identities=13% Similarity=0.165 Sum_probs=285.5
Q ss_pred cccchHHHhhcCC--CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcc
Q 012238 69 PILGVSEAFKADT--DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSV 146 (467)
Q Consensus 69 ~i~~~~~~~~~~~--~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~ 146 (467)
++.++.+.++.+. ++++|+|++|.|.++...++ ++.+.+++.+.+.......|.|..|.++||+++++++... +..
T Consensus 15 ~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~-~~~ 92 (401)
T TIGR01264 15 PIRAIVDNMKVKPNPEKPMIKLSIGDPTVFGNLPT-DPEVMQAMKDSLDSGKYNGYAPTVGALSAREAIASYYHNP-DGP 92 (401)
T ss_pred HHHHHHHHHHhhhhcCCCeeecCCCCCCCcCCCCC-CHHHHHHHHHHHhccCCCCCCCCCCCHHHHHHHHHHHhhc-CCC
Confidence 3555555555443 34779999999832223444 7888999888776544467999999999999999998764 556
Q ss_pred cccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcC
Q 012238 147 LKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA 226 (467)
Q Consensus 147 ~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~ 226 (467)
+++++|++ |+|+++++.++ +...+.+||+|++++|+|..|...++..|++++.++++.++++++|++.+++.++
T Consensus 93 ~~~~~i~~--t~G~~~al~~~--~~~l~~~gd~v~i~~P~y~~~~~~~~~~g~~v~~~~~~~~~~~~~d~~~l~~~~~-- 166 (401)
T TIGR01264 93 IEADDVVL--CSGCSHAIEMC--IAALANAGQNILVPRPGFPLYETLAESMGIEVKLYNLLPDKSWEIDLKQLESLID-- 166 (401)
T ss_pred CCHHHEEE--CcChHHHHHHH--HHHhCCCCCEEEEeCCCChhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHHhc--
Confidence 78899999 99999999998 3445679999999999999999999999999999988655578999999998886
Q ss_pred CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCc
Q 012238 227 PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL 306 (467)
Q Consensus 227 ~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~ 306 (467)
.+++++++++||||||.+++.+++++|+++|+++|++||+||+|.+|.+++. ...++..+. ...++|+++||||+|
T Consensus 167 -~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~--~~~~~~~~~-~~~~vi~~~SfSK~~ 242 (401)
T TIGR01264 167 -EKTAALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGA--TFEPLASLS-STVPILSCGGLAKRW 242 (401)
T ss_pred -cCceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCc--ccccHHHcC-CCCcEEEEccCcccC
Confidence 4567888999999999999999999999999999999999999999987531 222332332 223599999999999
Q ss_pred ccCCCccceEEEecCCH-HHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHH
Q 012238 307 GLYAERIGAMNVVCSSS-DLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIK 385 (467)
Q Consensus 307 ~~~G~RiG~~~~v~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~ 385 (467)
++||+|+||++ +.++ +.... +...++.... ...+++.+.|.++..+|.+. . ++++++.+++++
T Consensus 243 ~~~GlRiG~iv--~~~~~~~~~~--------~~~~~~~~~~-~~~~~~~~~q~a~~~~l~~~-~----~~~l~~~~~~~~ 306 (401)
T TIGR01264 243 LVPGWRLGWII--IHDRRGILRD--------IRDGLVKLSQ-RILGPCTIVQGALPSILLRT-P----QEYFDGTLSVLE 306 (401)
T ss_pred CCccceEEEEE--ecCcchhHHH--------HHHHHHHHhh-ccCCCCcHHHHHHHHHHHhC-c----HHHHHHHHHHHH
Confidence 99999999996 3332 22222 2222444433 23456778899998888652 1 244778899999
Q ss_pred HHHHHHHHHhhhccCCCCCcccccCCcceEEecCC----------CHHHHHHHHHcccEEEeCCC--------eEEeccC
Q 012238 386 NVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL----------NKAQSDNMTNKWHVYMTKDG--------RISLAGL 447 (467)
Q Consensus 386 ~~r~~l~~~l~~~~g~~~~~~~~~~~~g~f~~~~l----------~~~~~~~ll~~~gI~v~~gg--------Ris~~~~ 447 (467)
++|+.+.+.|+ .++ + +.+..|++|+|+|+++ +.++++++++++||.+.||+ ||+++.
T Consensus 307 ~~r~~l~~~L~-~~~--~-~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gI~v~pg~~f~~~~~iRis~~~- 381 (401)
T TIGR01264 307 SNAMLCYGALA-AVP--G-LRPVMPSGAMYMMVGIEMEHFPEFKNDVEFTERLVAEQSVFCLPGSCFEYPGFFRVVLTV- 381 (401)
T ss_pred HHHHHHHHHHH-hCC--C-CcccCCCeeeEEEEEecccccCCCCCHHHHHHHHHHhCCEEEeCchhcCCCCeEEEEEcC-
Confidence 99999999999 762 2 6777899999999974 23457778777899999872 999998
Q ss_pred ChhhHHHHHHHHHHHHHhc
Q 012238 448 SLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 448 ~~~~i~~~~~~l~~~l~~~ 466 (467)
++++++.++++|.+.++++
T Consensus 382 ~~~~l~~~l~rl~~~~~~~ 400 (401)
T TIGR01264 382 PVVMMEEACSRIQEFCERH 400 (401)
T ss_pred CHHHHHHHHHHHHHHHhcc
Confidence 7899999999999998875
No 32
>PRK06107 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.4e-46 Score=379.59 Aligned_cols=345 Identities=19% Similarity=0.202 Sum_probs=286.0
Q ss_pred CCCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCc
Q 012238 81 TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 160 (467)
Q Consensus 81 ~~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~gg 160 (467)
.++++++|+.|.| ..++ ++.+.+++.+.+.... ..|.+..|.++||+++++++....|..+++++|++ |+|+
T Consensus 31 ~~~~~i~l~~g~p----~~~~-~~~~~~~~~~~~~~~~-~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~--t~G~ 102 (402)
T PRK06107 31 AGRSIVDLTVGEP----DFDT-PDHIKQAAVAAIERGE-TKYTLVNGTPALRKAIIAKLERRNGLHYADNEITV--GGGA 102 (402)
T ss_pred ccCCEEEcCCCCC----CCCC-CHHHHHHHHHHHHcCC-CCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEE--eCCH
Confidence 3468999999998 4444 6778899888876543 67999999999999999999877788888999999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCC
Q 012238 161 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN 240 (467)
Q Consensus 161 t~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~N 240 (467)
++|+.++ +...+.+||+|++++|+|..|...+...|..++.+++++++++.+|++.+++.+. ++++++++++|||
T Consensus 103 ~~al~~~--~~~~~~~gd~vl~~~p~y~~y~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~---~~~~~v~l~~p~N 177 (402)
T PRK06107 103 KQAIFLA--LMATLEAGDEVIIPAPYWVSYPDMVLANDGTPVIVACPEEQGFKLTPEALEAAIT---PRTRWLILNAPSN 177 (402)
T ss_pred HHHHHHH--HHHhcCCCCEEEEecCCCcCHHHHHHHcCCEEEEecCCcccCCCCCHHHHHhhcC---cCceEEEEECCCC
Confidence 9999998 4445779999999999999999999999999888888545567899999999886 5677888899999
Q ss_pred CCCCCCCHHHHHHHHHHHHhc-CCeeEEeccCCCCCCCCCCCChhHHHHHHh-cCCeEEEEecCccCcccCCCccceEEE
Q 012238 241 PTGIDPTPEQWEKIADVIQEK-NHIPFFDVAYQGFASGSLDNDASSVRLFAT-RGMELLVAQSYSKNLGLYAERIGAMNV 318 (467)
Q Consensus 241 PTG~~~~~~~l~~l~~~~~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~S~SK~~~~~G~RiG~~~~ 318 (467)
|||.+++.+++++|+++|+++ ++++|+||+|.++.+++. ...++..+.. ..+++++++||||.|++||+|+||++
T Consensus 178 PtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~--~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~~- 254 (402)
T PRK06107 178 PTGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDE--PTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIGYAA- 254 (402)
T ss_pred CCCcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCC--CCCCHHHhCcCccCCEEEEeccchhhcCcccceeeee-
Confidence 999999999999999999998 999999999999887532 1222322211 24689999999999999999999996
Q ss_pred ecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 012238 319 VCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAK 398 (467)
Q Consensus 319 v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~ 398 (467)
+++++++. +.........+++.+.|.++..+|.++ ..++++.++.++++++.+.+.|+ +
T Consensus 255 --~~~~~~~~------------~~~~~~~~~~~~s~~~q~~~~~~l~~~------~~~~~~~~~~~~~~~~~~~~~L~-~ 313 (402)
T PRK06107 255 --GPADLIAA------------INKLQSQSSSCPSSISQAAAAAALNGD------QSFVTESVAVYKQRRDYALALLN-A 313 (402)
T ss_pred --cCHHHHHH------------HHHHHHhcccCCChHHHHHHHHHhcCC------hHHHHHHHHHHHHHHHHHHHHHh-c
Confidence 78888887 666555555678889999999998753 23477888999999999999998 7
Q ss_pred cCCCCCcccccCCcceEEecCC---------------C-HHHHHHHHHcccEEEeCC---C-----eEEeccCChhhHHH
Q 012238 399 DKSGKDWSFILRQIGMFSFTGL---------------N-KAQSDNMTNKWHVYMTKD---G-----RISLAGLSLAKCEY 454 (467)
Q Consensus 399 ~g~~~~~~~~~~~~g~f~~~~l---------------~-~~~~~~ll~~~gI~v~~g---g-----Ris~~~~~~~~i~~ 454 (467)
++ ++.+.+|++|||+|+.+ + .+++.++++++||.+.|| | ||+|+. +++++++
T Consensus 314 ~~---g~~~~~p~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~Fg~~~~iRis~~~-~~e~l~~ 389 (402)
T PRK06107 314 IP---GLSCLVPDGAFYLYVNCAGLIGKTTPEGKVLETDQDVVLYLLDSAGVAVVQGTAYGLSPYFRLSIAT-SLETLEE 389 (402)
T ss_pred CC---CCcccCCCcceEEeeecccccccccccccCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeCC-CHHHHHH
Confidence 62 16778899999999854 2 355778888889999998 2 999997 8999999
Q ss_pred HHHHHHHHHHhc
Q 012238 455 LADAIIDSYHNV 466 (467)
Q Consensus 455 ~~~~l~~~l~~~ 466 (467)
++++|.+.++++
T Consensus 390 ~l~~l~~~l~~~ 401 (402)
T PRK06107 390 ACARIERAVAAL 401 (402)
T ss_pred HHHHHHHHHHhc
Confidence 999999999875
No 33
>PRK05942 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.3e-46 Score=378.85 Aligned_cols=341 Identities=18% Similarity=0.181 Sum_probs=271.5
Q ss_pred CCCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccC-ceeeeecCC
Q 012238 81 TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQ-RVATVQGLS 159 (467)
Q Consensus 81 ~~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~-~i~~~~t~g 159 (467)
.++++|+|+.|.| ..++ ++.+.+++.+.+.......|++..|.++||+++++++...++..++++ +|++ |+|
T Consensus 33 ~g~~~i~l~~g~p----~~~~-p~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~v--t~G 105 (394)
T PRK05942 33 QGLDLIDLGMGNP----DGAA-PQPVIEAAIAALADPQNHGYPPFEGTASFRQAITDWYHRRYGVELDPDSEALP--LLG 105 (394)
T ss_pred cCCCeEEcCCCCC----CCCC-CHHHHHHHHHHHhCCCCccCCCCCCCHHHHHHHHHHHHHHHCCCcCCCCeEEE--ccC
Confidence 3457999999987 3333 555666655555433347899899999999999999987767777787 4888 999
Q ss_pred chhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCC
Q 012238 160 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAH 239 (467)
Q Consensus 160 gt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~ 239 (467)
+++++.++ +...+.+||+|++++|+|+.+...++..|++++.++++.++++.+|++.+++.+. ++++++++++||
T Consensus 106 ~~~al~~~--~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~---~~~k~i~l~~P~ 180 (394)
T PRK05942 106 SKEGLTHL--ALAYVNPGDVVLVPSPAYPAHFRGPLIAGAQIYPIILKPENDWLIDLSSIPEEVA---QQAKILYFNYPS 180 (394)
T ss_pred hHHHHHHH--HHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeecCCccCCccCHHHHHHhcc---ccceEEEEcCCC
Confidence 99999997 4445779999999999999999999999999999998655567899999999886 578899999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEe
Q 012238 240 NPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVV 319 (467)
Q Consensus 240 NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v 319 (467)
||||.+++.+++++|+++|+++|++||+||+|.++.+++. ...++..+....+.+|+++||||.||++|+|+||++
T Consensus 181 NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~--~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG~i~-- 256 (394)
T PRK05942 181 NPTTATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGY--QPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFVV-- 256 (394)
T ss_pred CCCCCcCCHHHHHHHHHHHHHcCeEEEEeccchhhccCCC--CCCChhhCCCccccEEEEecchhccCChhhheeeee--
Confidence 9999999999999999999999999999999999987532 112222222223467999999999999999999996
Q ss_pred cCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 012238 320 CSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD 399 (467)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~ 399 (467)
.++++++. ++........+++...|.++..+|+.. .+++++.+++++++++.+.+.|+ ..
T Consensus 257 -~~~~l~~~------------l~~~~~~~~~~~~~~~q~~~~~~l~~~------~~~~~~~~~~~~~~~~~~~~~L~-~~ 316 (394)
T PRK05942 257 -GNRHIIQG------------LRTLKTNLDYGIFSALQKAAETALQLP------DSYLQQVQERYRTRRDFLIQGLG-EL 316 (394)
T ss_pred -cCHHHHHH------------HHHHHhhcccCCCHHHHHHHHHHHhCc------HHHHHHHHHHHHHHHHHHHHHHH-HC
Confidence 78888887 555544434467778888888888642 34577888999999999999998 77
Q ss_pred CCCCCcccccCCcceEEecCC----C-HHHHHHHHHcccEEEeCC------C----eEEeccCChhhHHHHHHHHHHH
Q 012238 400 KSGKDWSFILRQIGMFSFTGL----N-KAQSDNMTNKWHVYMTKD------G----RISLAGLSLAKCEYLADAIIDS 462 (467)
Q Consensus 400 g~~~~~~~~~~~~g~f~~~~l----~-~~~~~~ll~~~gI~v~~g------g----Ris~~~~~~~~i~~~~~~l~~~ 462 (467)
| +.+..+++|+|+|+.+ + .+++.++++++||.+.|| + ||+++. +.+.+..++++|.++
T Consensus 317 ~----~~~~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~~-~~~~l~~~l~~l~~~ 389 (394)
T PRK05942 317 G----WNIPPTKATMYLWVPCPVGMGSTDFALNVLQKTGVVVTPGNAFGEGGEGYVRISLIA-DCDRLGEALDRLKQA 389 (394)
T ss_pred C----CeecCCCeeeEEEEECCCCCCHHHHHHHHHHHCCEEEeCChhhCcCCCCeEEEEecC-CHHHHHHHHHHHHHh
Confidence 6 5677889999999865 2 355667887889999886 1 999986 567777777777654
No 34
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=1.6e-46 Score=384.02 Aligned_cols=347 Identities=15% Similarity=0.184 Sum_probs=274.7
Q ss_pred CcEEecCcccCCCCCCCCchHHHHHHHHHHHhc-----------CCCCcCCCCcchHHHHHHHHHHHhCCCC--cccccC
Q 012238 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-----------GENKEYLPIEGLAAFNKVTAELLFGADN--SVLKEQ 150 (467)
Q Consensus 84 ~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~-----------~~~~~Y~~~~G~~~lr~aia~~l~~~~~--~~~~~~ 150 (467)
+.|+|+++++ ..+ .+.+.+.+....+. .....|.+..|.++||+++|+++....+ ..++++
T Consensus 39 g~i~L~~~En----~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~v~~~ 112 (468)
T PLN02450 39 GIIQMGLAEN----QLS--FDLIESWLAKNPDAAGLKRNGQSIFRELALFQDYHGLPAFKNALAEFMSEIRGNKVTFDPN 112 (468)
T ss_pred eeEEeehhHh----Hhh--HHHHHHHHHhCchhhhcccccccchhhhhcCCCCCChHHHHHHHHHHHHHhhCCCCCcChH
Confidence 7999999987 332 45566655543210 1124588888999999999999976555 346899
Q ss_pred ceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHh-hCCCCeEEeeeecCCCCCCChhhHHHHHHcC---
Q 012238 151 RVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-DARVPWSEYRYYDPKTVGLDFEGMIADIKAA--- 226 (467)
Q Consensus 151 ~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~-~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~--- 226 (467)
+|++ |+|+++++.++ +...+.|||.|++++|+|+.|...+. ..|++++.+++++++++.+|++.+++.+++.
T Consensus 113 ~Iii--t~Ga~~al~~l--~~~l~~pGd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~~~~~le~~~~~~~~~ 188 (468)
T PLN02450 113 KLVL--TAGATSANETL--MFCLAEPGDAFLLPTPYYPGFDRDLKWRTGVEIVPIHCSSSNGFQITESALEEAYQQAQKL 188 (468)
T ss_pred HeEE--ccChHHHHHHH--HHHhCCCCCEEEECCCCCCchHHHHhhcCCcEEEEEecCCccCCcCCHHHHHHHHHHHHhc
Confidence 9999 99999999997 44457799999999999999988888 5899999999865667888999999988642
Q ss_pred CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHh--------cCCeEEE
Q 012238 227 PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT--------RGMELLV 298 (467)
Q Consensus 227 ~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~--------~~~~~i~ 298 (467)
..++++++++|||||||.+++.+++++|+++|++||++||+||+|.++.+++. ...++..... ..+++++
T Consensus 189 ~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~~--~~~s~l~~~~~~~~~~~~~~~~vi~ 266 (468)
T PLN02450 189 NLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDSP--GFVSVMEVLKDRKLENTDVSNRVHI 266 (468)
T ss_pred CCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccccCCC--CcccHHHHhhhcccccCCCCCcEEE
Confidence 23678889999999999999999999999999999999999999999887542 1212222221 2468999
Q ss_pred EecCccCcccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHH
Q 012238 299 AQSYSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEME 378 (467)
Q Consensus 299 ~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~ 378 (467)
++||||.|+++|+|+||++ +.++.+++. +.+... +..++.+.|.++..+|+++.+.+. +++
T Consensus 267 l~S~SK~~~l~GlRiG~li--~~~~~l~~~------------~~~~~~--~~~~s~~~Q~a~~~~L~~~~~~~~---~l~ 327 (468)
T PLN02450 267 VYSLSKDLGLPGFRVGAIY--SNDEMVVSA------------ATKMSS--FGLVSSQTQYLLSALLSDKKFTKN---YLE 327 (468)
T ss_pred EEeccccCCCCCccEEEEE--ECCHHHHHH------------HHHHhh--cCCCCHHHHHHHHHHhCCchhHHH---HHH
Confidence 9999999999999999996 444545554 444322 334678899999999998765332 467
Q ss_pred HHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceEEecCCC-----------HHHHHHHHHcccEEEeCC--------
Q 012238 379 MMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLN-----------KAQSDNMTNKWHVYMTKD-------- 439 (467)
Q Consensus 379 ~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~~~g~f~~~~l~-----------~~~~~~ll~~~gI~v~~g-------- 439 (467)
+.+++++++|+.+.+.|+ ++| +.+.++++|+|+|+.+. .++++++++++||.+.||
T Consensus 328 ~~~~~l~~rr~~l~~~L~-~~g----i~~~~~~~g~flwi~l~~~~~~~~~~~~~~l~~~ll~~~gV~v~PG~~f~~~~~ 402 (468)
T PLN02450 328 ENQKRLKQRQKKLVSGLE-AAG----IKCLKSNAGLFCWVDMRHLLKSNTFEAEMELWKKIVYEVKLNISPGSSCHCTEP 402 (468)
T ss_pred HHHHHHHHHHHHHHHHHH-HcC----CcccCCCceEEEEEEchHhcCcCCchHHHHHHHHHHHhCCEEEeCccccCCCCC
Confidence 889999999999999999 876 57788999999998763 234667788789999998
Q ss_pred C--eEEeccCChhhHHHHHHHHHHHHHhc
Q 012238 440 G--RISLAGLSLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 440 g--Ris~~~~~~~~i~~~~~~l~~~l~~~ 466 (467)
| ||+|+..+++++++++++|++++++.
T Consensus 403 g~~Rl~f~~~~~~~l~~~l~ri~~~l~~~ 431 (468)
T PLN02450 403 GWFRVCFANMSEETLDLAMKRLKSFVESD 431 (468)
T ss_pred CEEEEEecCCCHHHHHHHHHHHHHHHHhc
Confidence 2 99999767899999999999998753
No 35
>PRK12414 putative aminotransferase; Provisional
Probab=100.00 E-value=1.2e-46 Score=377.70 Aligned_cols=335 Identities=15% Similarity=0.188 Sum_probs=274.5
Q ss_pred CCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCccccc-CceeeeecCCch
Q 012238 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKE-QRVATVQGLSGT 161 (467)
Q Consensus 83 ~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~-~~i~~~~t~ggt 161 (467)
+++|+|+.|.| ..++ ++.+.+++.+.+... ...|.|..|.++||+++++++...+|..+++ ++|++ |+|++
T Consensus 29 ~~~i~l~~g~p----~~~~-~~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~i--t~g~~ 100 (384)
T PRK12414 29 HDALNLSQGAP----NFAP-DPALVEGVARAMRDG-HNQYAPMAGIAALREALAEKTERLYGARYDPASEVTV--IASAS 100 (384)
T ss_pred CCeEEcCCCCC----CCCC-CHHHHHHHHHHHHhC-CCCcCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEE--ECChH
Confidence 47899999998 4544 788888888876544 3789999999999999999987766766665 58999 99999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCC
Q 012238 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 241 (467)
Q Consensus 162 ~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NP 241 (467)
+++.++ +...+.+||+|+++.|+|..|...++..|++++.++++ ++++.+|++.+++.++ ++++++++++||||
T Consensus 101 ~al~~~--~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~-~~~~~~d~~~l~~~l~---~~~~~v~i~~p~NP 174 (384)
T PRK12414 101 EGLYAA--ISALVHPGDEVIYFEPSFDSYAPIVRLQGATPVAIKLS-PEDFRVNWDEVAAAIT---PRTRMIIVNTPHNP 174 (384)
T ss_pred HHHHHH--HHHhcCCCCEEEEeCCCccchHHHHHHcCCEEEEEecC-ccccccCHHHHHhhcC---cccEEEEEcCCCCC
Confidence 999987 44457899999999999999999999999999999985 3457899999999886 46788899999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecC
Q 012238 242 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 321 (467)
Q Consensus 242 TG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~ 321 (467)
||.+++.+++++|+++|++||++||+||+|.++.+++. ...++..+....+++|+++||||.||+||+|+||++ +
T Consensus 175 TG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~--~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRiG~~v---~ 249 (384)
T PRK12414 175 SATVFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGA--RHHSMARHRELAERSVIVSSFGKSYHVTGWRVGYCL---A 249 (384)
T ss_pred CCcCCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCC--CccCcccCcCccCcEEEEecccccccCccceEEEEe---c
Confidence 99999999999999999999999999999999887632 111222222224589999999999999999999996 7
Q ss_pred CHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC
Q 012238 322 SSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKS 401 (467)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~ 401 (467)
++++++. +.+.......+++.+.|.++..+|.++.. ..+.++.|+++|+.+.+.|+ +.|
T Consensus 250 ~~~l~~~------------l~~~~~~~~~~~s~~~q~a~~~~l~~~~~-------~~~~~~~~~~~r~~l~~~L~-~~g- 308 (384)
T PRK12414 250 PAELMDE------------IRKVHQFMVFSADTPMQHAFAEALAEPAS-------YLGLGAFYQRKRDLLARELA-GSR- 308 (384)
T ss_pred CHHHHHH------------HHHHHhheecCCCcHHHHHHHHHhcCChH-------HHHHHHHHHHHHHHHHHHHH-hCC-
Confidence 7888877 65555444556778899999999987532 22467788999999999999 776
Q ss_pred CCCcccccCCcceEEecCC-------CHHHHHHHHHcccEEEeCC----------C--eEEeccCChhhHHHHHHHHHH
Q 012238 402 GKDWSFILRQIGMFSFTGL-------NKAQSDNMTNKWHVYMTKD----------G--RISLAGLSLAKCEYLADAIID 461 (467)
Q Consensus 402 ~~~~~~~~~~~g~f~~~~l-------~~~~~~~ll~~~gI~v~~g----------g--Ris~~~~~~~~i~~~~~~l~~ 461 (467)
+.+.++.||||+|+.+ +.+++.++++++||.+.|| + ||+|+. +++++++++++|.+
T Consensus 309 ---~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRis~~~-~~~~~~~~~~rl~~ 383 (384)
T PRK12414 309 ---FELLPSEGSFFMLARFRHFSDESDSDFVLRLIRDARVATIPLSAFYTDGTDTGLIRLSFSK-DDATLVEGARRLCS 383 (384)
T ss_pred ---CeecCCCcceEEEEcccccCCCCHHHHHHHHHHhCCEEEecchhhcCCCCCCCEEEEEecC-CHHHHHHHHHHHhh
Confidence 5778899999999743 3456777887889999996 1 999998 78999999988864
No 36
>PRK07337 aminotransferase; Validated
Probab=100.00 E-value=2.4e-46 Score=376.52 Aligned_cols=338 Identities=17% Similarity=0.221 Sum_probs=277.6
Q ss_pred CCCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCc
Q 012238 81 TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 160 (467)
Q Consensus 81 ~~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~gg 160 (467)
.++++++|+.|.| ..++ ++.+.+++.+.+... ...|.+..|.++||+++|+++...+|..+++++|++ |+|+
T Consensus 28 ~~~~~i~l~~~~~----~~~~-~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~--t~G~ 99 (388)
T PRK07337 28 AGRDIIHMGIGEP----DFTA-PEPVVEAAARALRRG-VTQYTSALGLAPLREAIAAWYARRFGLDVAPERIVV--TAGA 99 (388)
T ss_pred cCCCEEEeCCcCC----CCCC-CHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHHHHHhCCCCChHhEEE--ecCc
Confidence 4568999999988 4443 677888888877544 367988899999999999999877787788999999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCC
Q 012238 161 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN 240 (467)
Q Consensus 161 t~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~N 240 (467)
+++++++ +...+.+||+|++++|+|+.+...++..|++++.++++++.++++|++.+++.+. ++++++++++|||
T Consensus 100 ~~al~~~--~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~v~l~~p~N 174 (388)
T PRK07337 100 SAALLLA--CLALVERGDEVLMPDPSYPCNRHFVAAAEGRPVLVPSGPAERFQLTAADVEAAWG---ERTRGVLLASPSN 174 (388)
T ss_pred HHHHHHH--HHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCcCCHHHHHhhcC---ccceEEEEECCCC
Confidence 9999997 3445679999999999999999999999999999998655578899999999886 5778888999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEec
Q 012238 241 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC 320 (467)
Q Consensus 241 PTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~ 320 (467)
|||.+++.+++++|+++|+++++++|+||+|.++.+++. ..+ .....+++++++||||.||++|+|+||++
T Consensus 175 PtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~---~~~---~~~~~~~vi~~~S~SK~~~~~G~RiG~~~--- 245 (388)
T PRK07337 175 PTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAA---PVS---ALSLGDDVITINSFSKYFNMTGWRLGWLV--- 245 (388)
T ss_pred CCCcCcCHHHHHHHHHHHHHCCCEEEEeccccccccCCC---CcC---hhhccCCEEEEEechhhcCCchhheeeee---
Confidence 999999999999999999999999999999999887531 111 12335689999999999999999999996
Q ss_pred CCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 012238 321 SSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK 400 (467)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g 400 (467)
.++++++. +.........+++.+.|.++..++.+..+ +.+++.++.++++|+.+.+.|+ +.+
T Consensus 246 ~~~~l~~~------------l~~~~~~~~~~~s~~~q~~~~~~l~~~~~-----~~~~~~~~~~~~~r~~~~~~L~-~~~ 307 (388)
T PRK07337 246 VPEALVGT------------FEKLAQNLFICASALAQHAALACFEPDTL-----AIYERRRAEFKRRRDFIVPALE-SLG 307 (388)
T ss_pred cCHHHHHH------------HHHHHHHhccCCChHHHHHHHHHhccCch-----HHHHHHHHHHHHHHHHHHHHHH-hcC
Confidence 77777777 65555544556788889998888865432 2246678899999999999999 776
Q ss_pred CCCCccc-ccCCcceEEecCCC----------HHHHHHHHHcccEEEeCC---------C--eEEeccCChhhHHHHHHH
Q 012238 401 SGKDWSF-ILRQIGMFSFTGLN----------KAQSDNMTNKWHVYMTKD---------G--RISLAGLSLAKCEYLADA 458 (467)
Q Consensus 401 ~~~~~~~-~~~~~g~f~~~~l~----------~~~~~~ll~~~gI~v~~g---------g--Ris~~~~~~~~i~~~~~~ 458 (467)
. .+ ..|++|+|+|+++. .+++.++++++||.+.|| | ||+|+. ++++++.++++
T Consensus 308 ~----~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~Ri~~~~-~~~~l~~~l~r 382 (388)
T PRK07337 308 F----KVPVMPDGAFYVYADCRGVAHPAAGDSAALTQAMLHDAGVVLVPGRDFGPHAPRDYIRLSYAT-SMSRLEEAVAR 382 (388)
T ss_pred C----ccccCCCeeEEEEEecccccCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCCEEEEEecC-CHHHHHHHHHH
Confidence 3 33 46789999998652 245677788889999886 1 999998 78999999999
Q ss_pred HHHHH
Q 012238 459 IIDSY 463 (467)
Q Consensus 459 l~~~l 463 (467)
|.+++
T Consensus 383 l~~~l 387 (388)
T PRK07337 383 LGKLF 387 (388)
T ss_pred HHHHh
Confidence 98764
No 37
>PRK05957 aspartate aminotransferase; Provisional
Probab=100.00 E-value=4.7e-46 Score=374.11 Aligned_cols=344 Identities=18% Similarity=0.213 Sum_probs=279.8
Q ss_pred CCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccc-cCceeeeecCCch
Q 012238 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLK-EQRVATVQGLSGT 161 (467)
Q Consensus 83 ~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~-~~~i~~~~t~ggt 161 (467)
+++++|+.|.+ ..++ ++.+.+++.+.+.......|.+..|.+++|+++++++....|..++ +++|++ |+|++
T Consensus 27 ~~~~~l~~g~~----~~~~-~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~--t~G~~ 99 (389)
T PRK05957 27 PGTISLGQGVV----SYPP-PPEAIEALNNFLANPENHKYQAVQGIPPLLEAITQKLQQDNGIELNNEQAIVV--TAGSN 99 (389)
T ss_pred CCeEEccCCCC----CCCC-CHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEE--eCChH
Confidence 47899999998 4444 7888999988765443467999999999999999999777777666 678998 99999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCC
Q 012238 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 241 (467)
Q Consensus 162 ~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NP 241 (467)
+++.++ +...+.+||+|++++|+|..+...++..|++++.++. +.++++|++.+++.++ ++++++++++||||
T Consensus 100 ~~l~~~--~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~---~~~klv~~~~p~NP 172 (389)
T PRK05957 100 MAFMNA--ILAITDPGDEIILNTPYYFNHEMAITMAGCQPILVPT--DDNYQLQPEAIEQAIT---PKTRAIVTISPNNP 172 (389)
T ss_pred HHHHHH--HHHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEeec--CCCCCcCHHHHHHhcC---cCceEEEEeCCCCC
Confidence 999887 3444679999999999999999999999999999988 3467899999999886 56788889999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecC
Q 012238 242 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 321 (467)
Q Consensus 242 TG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~ 321 (467)
||.+++.+++++|+++|+++|+++|+||+|.++.++... ..+...+.+...++|+++||||.||++|+|+||++ .
T Consensus 173 tG~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~--~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~---~ 247 (389)
T PRK05957 173 TGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVK--HFSPGSIPGSGNHTISLYSLSKAYGFASWRIGYMV---I 247 (389)
T ss_pred CCcCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCC--ccChhhCCCccCcEEEEecchhhccCccceeEEEe---c
Confidence 999999999999999999999999999999999876321 11222223444689999999999999999999996 6
Q ss_pred CHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC
Q 012238 322 SSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKS 401 (467)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~ 401 (467)
+++++++ +.........+++.+.|.++..+|.++. .++++.+++++++|+.+.+.|+ +++
T Consensus 248 ~~~~~~~------------~~~~~~~~~~~~~~~~q~~~~~~l~~~~------~~~~~~~~~~~~~r~~l~~~L~-~~~- 307 (389)
T PRK05957 248 PIHLLEA------------IKKIQDTILICPPVVSQYAALGALQVGK------SYCQQHLPEIAQVRQILLKSLG-QLQ- 307 (389)
T ss_pred CHHHHHH------------HHHHHhhcccCCCcHHHHHHHHHHhCCh------HHHHHHHHHHHHHHHHHHHHHH-hcC-
Confidence 7788887 6555555555778889999888887642 2245566778999999999998 763
Q ss_pred CCCcccccCCcceEEecCC----C-HHHHHHHHHcccEEEeCC--------C--eEEeccCChhhHHHHHHHHHHHHHhc
Q 012238 402 GKDWSFILRQIGMFSFTGL----N-KAQSDNMTNKWHVYMTKD--------G--RISLAGLSLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 402 ~~~~~~~~~~~g~f~~~~l----~-~~~~~~ll~~~gI~v~~g--------g--Ris~~~~~~~~i~~~~~~l~~~l~~~ 466 (467)
+.+.+.++++|+|+|+.+ + .++++++++++||.+.|| + ||||+..+++++++++++|.+.++++
T Consensus 308 -~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~l~~~~~~l~~~~~~~ 386 (389)
T PRK05957 308 -DRCTLHPANGAFYCFLKVNTDLNDFELVKQLIREYRVAVIPGTTFGMKNGCYLRIAYGALQKATAKEGIERLVQGLKTI 386 (389)
T ss_pred -CCccccCCCeeEEEEEeCCCCCChHHHHHHHHHHCCEEEccchhhCCCCCCEEEEEEecCCHHHHHHHHHHHHHHHHhh
Confidence 213667889999999864 2 366788887789999997 1 99998778899999999999988764
No 38
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=7.6e-46 Score=373.36 Aligned_cols=339 Identities=16% Similarity=0.127 Sum_probs=271.9
Q ss_pred CCCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcc--cccC-ceeeeec
Q 012238 81 TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSV--LKEQ-RVATVQG 157 (467)
Q Consensus 81 ~~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~--~~~~-~i~~~~t 157 (467)
.+.+.|+|+.|+| ..++ ++.+.+++.+.+.. ...|.+..|.++||+++|+++...++.. ++++ +|++ |
T Consensus 26 ~~~~~i~l~~~~p----~~~~-~~~~~~a~~~~~~~--~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~i--t 96 (393)
T TIGR03538 26 ASKPPIALSIGEP----KHPT-PAFVLEALRENLHG--LSTYPTTKGLPELRQAIARWLERRFDLPTGVDPERHVLP--V 96 (393)
T ss_pred cCCCeEEecCCCC----CCCC-CHHHHHHHHHHhhc--cCCCCCCCCCHHHHHHHHHHHHHhhCCcccCCCCceEEE--C
Confidence 4568999999998 4444 78899998887642 4789999999999999999998776665 6775 7988 9
Q ss_pred CCchhHHHHHHHHHHHhCCCCE--EEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEe
Q 012238 158 LSGTGSLRLAAALIERYFPGAK--VLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLH 235 (467)
Q Consensus 158 ~ggt~al~l~~~~l~~~~~gd~--Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i 235 (467)
+|+++++.++ +...+.|||+ |++++|+|..|...++..|++++.+++++++++.+|++++++.+. .+++++++
T Consensus 97 ~Ga~~al~~~--~~~l~~~gd~~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~---~~~k~i~l 171 (393)
T TIGR03538 97 NGTREALFAF--AQAVINPGQAPLVVMPNPFYQIYEGAALLAGAEPYFLNCTAENGFLPDFDAVPESVW---RRCQLLFV 171 (393)
T ss_pred CCcHHHHHHH--HHHHcCCCCcceEEecCCCCcchHHHHHhcCCeEEEeeccccCCCCCCHHHHHHHHh---hcceEEEE
Confidence 9999999997 3445679986 999999999999999999999999999655567899999998886 46778888
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHh----cCCeEEEEecCccCcccCCC
Q 012238 236 GCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT----RGMELLVAQSYSKNLGLYAE 311 (467)
Q Consensus 236 ~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~----~~~~~i~~~S~SK~~~~~G~ 311 (467)
++||||||.+++.+++++|+++|++||++||+||+|.++.+++..........+.. ..+++|+++||||.|+++|+
T Consensus 172 ~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~~~Gl 251 (393)
T TIGR03538 172 CSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSNLPGL 251 (393)
T ss_pred eCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEecchhhcCCccc
Confidence 99999999999999999999999999999999999999987521011111111111 24689999999999999999
Q ss_pred ccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHH
Q 012238 312 RIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKL 391 (467)
Q Consensus 312 RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l 391 (467)
|+||++ +++++++. +.+.......+++.+.|.++...+.+. +++++.++.++++++.+
T Consensus 252 RvG~~i---~~~~l~~~------------~~~~~~~~~~~~~~~~q~~~~~~l~~~-------~~~~~~~~~~~~~~~~~ 309 (393)
T TIGR03538 252 RSGFVA---GDAEILKA------------FLRYRTYHGCAMPIPTQLASIAAWNDE-------QHVRENRALYREKFAAV 309 (393)
T ss_pred ceEEEe---cCHHHHHH------------HHHHHHhhccCcCHHHHHHHHHHhcCh-------HHHHHHHHHHHHHHHHH
Confidence 999996 78888877 555444334466778888877777543 34778889999999999
Q ss_pred HHHhhhccCCCCCcccccCCcceEEecCCC---HHHHHHHHHcccEEEeCC--------------C--eEEeccCChhhH
Q 012238 392 FDSLSAKDKSGKDWSFILRQIGMFSFTGLN---KAQSDNMTNKWHVYMTKD--------------G--RISLAGLSLAKC 452 (467)
Q Consensus 392 ~~~l~~~~g~~~~~~~~~~~~g~f~~~~l~---~~~~~~ll~~~gI~v~~g--------------g--Ris~~~~~~~~i 452 (467)
.+.|+ .. +.+..|++|+|+|+.+. .++++++++++||.+.|| + ||||+. +++++
T Consensus 310 ~~~L~-~~-----~~~~~p~gg~f~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris~~~-~~~~l 382 (393)
T TIGR03538 310 LEILG-QV-----LDLELPDAGFYLWPKVPGDDEAFARALYEEENVTVLPGRFLAREAEGVNPGEGRVRIALVA-PLEEC 382 (393)
T ss_pred HHHHH-hh-----CcccCCCeeEEEEEECCCCHHHHHHHHHHHCCEEEeCCccccccccCCCCCCCEEEEEecC-CHHHH
Confidence 99998 64 23567899999999863 455677777789999665 1 999988 78999
Q ss_pred HHHHHHHHHH
Q 012238 453 EYLADAIIDS 462 (467)
Q Consensus 453 ~~~~~~l~~~ 462 (467)
+.++++|.+.
T Consensus 383 ~~~l~~l~~~ 392 (393)
T TIGR03538 383 VEAAERIRSF 392 (393)
T ss_pred HHHHHHHHHh
Confidence 9999999874
No 39
>PRK06108 aspartate aminotransferase; Provisional
Probab=100.00 E-value=7.5e-46 Score=372.48 Aligned_cols=342 Identities=19% Similarity=0.188 Sum_probs=281.5
Q ss_pred CCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchh
Q 012238 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (467)
Q Consensus 83 ~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (467)
+++|+|+.|+| ..++ ++.+.+++.+.+.... ..|.+..|.+++|+++++++...+|..+++++|++ |+|+++
T Consensus 24 ~~~i~l~~g~~----~~~~-~~~~~~~~~~~~~~~~-~~Y~~~~G~~~lr~~la~~~~~~~~~~~~~~~i~~--t~g~~~ 95 (382)
T PRK06108 24 EGVLPLWFGES----DLPT-PDFIRDAAAAALADGE-TFYTHNLGIPELREALARYVSRLHGVATPPERIAV--TSSGVQ 95 (382)
T ss_pred CCeEEecCCCC----CCCC-CHHHHHHHHHHHhcCC-CCCCCCCCCHHHHHHHHHHHHHHhCCCcCcceEEE--eCChHH
Confidence 47899999998 4554 7889999888876543 56988999999999999999877777788999999 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecC-CCCCCChhhHHHHHHcCCCCcEEEEeCCCCCC
Q 012238 163 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDP-KTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 241 (467)
Q Consensus 163 al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~-~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NP 241 (467)
++.++ +...+.+||+|++++|+|..|...++..|++++.+|++++ .++.+|++.+++.++ ++++++++++||||
T Consensus 96 al~~~--~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~---~~~~~i~l~~p~NP 170 (382)
T PRK06108 96 ALMLA--AQALVGPGDEVVAVTPLWPNLVAAPKILGARVVCVPLDFGGGGWTLDLDRLLAAIT---PRTRALFINSPNNP 170 (382)
T ss_pred HHHHH--HHHhcCCCCEEEEeCCCccchHHHHHHCCCEEEEeeCCCCCCCccCCHHHHHHhcC---ccceEEEEECCCCC
Confidence 99997 3444679999999999999999999999999999998642 356799999999886 46788889999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecC
Q 012238 242 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 321 (467)
Q Consensus 242 TG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~ 321 (467)
||.+++.+++++|+++|+++|+++|+||+|.++.++. .....+...+.+..+++++++||||.||++|+|+||++ +
T Consensus 171 tG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~-~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~---~ 246 (382)
T PRK06108 171 TGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAP-GGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGWLV---A 246 (382)
T ss_pred CCcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCC-CCCCCCHhhcCCCcCCEEEEeechhhccCcccceeeee---C
Confidence 9999999999999999999999999999999998751 11222222333345689999999999999999999996 7
Q ss_pred CHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC
Q 012238 322 SSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKS 401 (467)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~ 401 (467)
++++++. +.........+++.+.|.++..+|.+. .+++++.+++++++++.+.+.|+ ++.
T Consensus 247 ~~~~~~~------------~~~~~~~~~~~~~~~~q~a~~~~l~~~------~~~~~~~~~~~~~~~~~l~~~L~-~~~- 306 (382)
T PRK06108 247 PPALGQV------------LEKLIEYNTSCVAQFVQRAAVAALDEG------EDFVAELVARLRRSRDHLVDALR-ALP- 306 (382)
T ss_pred CHHHHHH------------HHHHHHhcccCCChHHHHHHHHHHhCC------hHHHHHHHHHHHHHHHHHHHHHH-hCC-
Confidence 7888877 444443345567888898988888764 23467788899999999999998 762
Q ss_pred CCCcccccCCcceEEecCCC-----HHHHHHHHHcccEEEeCC--------C--eEEeccCChhhHHHHHHHHHHHHH
Q 012238 402 GKDWSFILRQIGMFSFTGLN-----KAQSDNMTNKWHVYMTKD--------G--RISLAGLSLAKCEYLADAIIDSYH 464 (467)
Q Consensus 402 ~~~~~~~~~~~g~f~~~~l~-----~~~~~~ll~~~gI~v~~g--------g--Ris~~~~~~~~i~~~~~~l~~~l~ 464 (467)
++++..|++|+|+|+.+. .++++++++++||.+.|| + |||++. +++++++++++|+++++
T Consensus 307 --~~~~~~p~~g~~~~~~l~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ris~~~-~~~~l~~~l~~l~~~l~ 381 (382)
T PRK06108 307 --GVEVAKPDGAMYAFFRIPGVTDSLALAKRLVDEAGLGLAPGTAFGPGGEGFLRWCFAR-DPARLDEAVERLRRFLA 381 (382)
T ss_pred --CCcccCCCeeEEEEEeCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC-CHHHHHHHHHHHHHHHh
Confidence 167788899999998652 356777888889999886 1 999998 89999999999999875
No 40
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=100.00 E-value=9.1e-46 Score=374.63 Aligned_cols=350 Identities=15% Similarity=0.161 Sum_probs=279.5
Q ss_pred CCCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCC------CcccccCceee
Q 012238 81 TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGAD------NSVLKEQRVAT 154 (467)
Q Consensus 81 ~~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~------~~~~~~~~i~~ 154 (467)
.++++|+|+.|.|..+....+ ++.+.+++.+.+.......|++..|.++||+++|+++...+ +..+++++|++
T Consensus 31 ~~~~~i~l~~g~p~~~~~~~p-~~~~~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~~~i~i 109 (412)
T PTZ00433 31 SPKSIIKLSVGDPTLDGNLLT-PAIQTKALVEAVDSQECNGYPPTVGSPEAREAVATYWRNSFVHKESLKSTIKKDNVVL 109 (412)
T ss_pred CCCCeeecCCcCCCCcCCCCC-CHHHHHHHHHHhhcCCCCCCCCCCCcHHHHHHHHHHHHhhccccccccCCCChhhEEE
Confidence 556899999999821111223 78899999887765434789888999999999999987543 45678999999
Q ss_pred eecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEE
Q 012238 155 VQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILL 234 (467)
Q Consensus 155 ~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~ 234 (467)
|+|+++++.++ +...+.+||+|+++.|+|..|...++..|++++.+++++++++++|++.+++.++ .++++++
T Consensus 110 --t~G~~~al~~~--~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~---~~~~~i~ 182 (412)
T PTZ00433 110 --CSGVSHAILMA--LTALCDEGDNILVPAPGFPHYETVCKAYGIEMRFYNCRPEKDWEADLDEIRRLVD---DRTKALI 182 (412)
T ss_pred --eCChHHHHHHH--HHHhcCCCCEEEEccCCcccHHHHHHHcCCEEEEEecCccccCcCCHHHHHHHhc---cCceEEE
Confidence 99999999998 4445679999999999999999999999999999998655678999999998886 4678888
Q ss_pred eCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccc
Q 012238 235 HGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIG 314 (467)
Q Consensus 235 i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG 314 (467)
+++||||||.+++.+++++|+++|+++|++||+||+|.++.+++. ...++..+ ....++|+++||||.||+||+|+|
T Consensus 183 ~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~--~~~~~~~~-~~~~~~i~~~SfSK~~~~pGlRlG 259 (412)
T PTZ00433 183 MTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGA--TFTSVADF-DTTVPRVILGGTAKNLVVPGWRLG 259 (412)
T ss_pred EeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccccCCC--Cccchhhc-cCCCceEEEccchhhcCCCCeeEE
Confidence 999999999999999999999999999999999999999987531 22223233 222368999999999999999999
Q ss_pred eEEEecC-C----HHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHH
Q 012238 315 AMNVVCS-S----SDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQ 389 (467)
Q Consensus 315 ~~~~v~~-~----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~ 389 (467)
|++ +. + +++++. ++..... ..+++.+.|.++..+|.+. . ..++++.++.++++|+
T Consensus 260 ~~i--~~~p~~~~~~~~~~------------~~~~~~~-~~~~~~~~q~a~~~~l~~~-~----~~~~~~~~~~~~~~r~ 319 (412)
T PTZ00433 260 WLL--LVDPHGNGGDFLDG------------MKRLGML-VCGPCSVVQAALGEALLNT-P----QEHLEQIVAKLEEGAM 319 (412)
T ss_pred EEE--EeCCcccHHHHHHH------------HHHHhhc-cCCCChHHHHHHHHHHhcC-c----HHHHHHHHHHHHHHHH
Confidence 996 32 2 344444 5554332 3467888999998888753 1 3447788899999999
Q ss_pred HHHHHhhhccCCCCCcccccCCcceEEecCCC----------HHHHHHHHHcccEEEeCCC--------eEEeccCChhh
Q 012238 390 KLFDSLSAKDKSGKDWSFILRQIGMFSFTGLN----------KAQSDNMTNKWHVYMTKDG--------RISLAGLSLAK 451 (467)
Q Consensus 390 ~l~~~l~~~~g~~~~~~~~~~~~g~f~~~~l~----------~~~~~~ll~~~gI~v~~gg--------Ris~~~~~~~~ 451 (467)
.+.+.|+ +.. .+.+..|++|+|+|+.++ .++++.+++++||.+.||. ||+|+. .+++
T Consensus 320 ~l~~~L~-~~~---~~~~~~p~gg~f~~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRis~~~-~~e~ 394 (412)
T PTZ00433 320 VLYNHIG-ECI---GLSPTMPRGSMFLMSRLDLEKFRDIKSDVEFYEKLLEEENVQVLPGEIFHMPGFTRLTISR-PVEV 394 (412)
T ss_pred HHHHHHh-cCC---CCcccCCCeeEEEEEEechhhcCCCCCHHHHHHHHHHhcCEEEeCccccCCCCeEEEEecC-CHHH
Confidence 9999998 642 156778999999997542 3567788877899999972 999997 6889
Q ss_pred HHHHHHHHHHHHHhc
Q 012238 452 CEYLADAIIDSYHNV 466 (467)
Q Consensus 452 i~~~~~~l~~~l~~~ 466 (467)
+++++++|.+++++.
T Consensus 395 l~~al~~l~~~~~~~ 409 (412)
T PTZ00433 395 LREAVERIKAFCERH 409 (412)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999998754
No 41
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=100.00 E-value=9.6e-46 Score=372.10 Aligned_cols=342 Identities=17% Similarity=0.182 Sum_probs=278.5
Q ss_pred CCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCccccc-CceeeeecCCch
Q 012238 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKE-QRVATVQGLSGT 161 (467)
Q Consensus 83 ~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~-~~i~~~~t~ggt 161 (467)
++.|+|+.|.| ..++ ++.+.+++.+.+.... ..|.+..|.++||+++++++...++..+++ ++|++ |+|++
T Consensus 30 ~~~i~l~~~~~----~~~~-~~~~~~~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~i--t~G~~ 101 (391)
T PRK07309 30 PGILKLTLGEP----DFTT-PDHVKEAAKRAIDANQ-SHYTGMAGLLELRQAAADFVKEKYNLDYAPENEILV--TIGAT 101 (391)
T ss_pred CCeEEcCCCCC----CCCC-CHHHHHHHHHHHhcCC-CCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEE--eCChH
Confidence 57999999998 3433 6778888888765433 569899999999999999998777776664 68998 99999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCC
Q 012238 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 241 (467)
Q Consensus 162 ~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NP 241 (467)
++++++ +...+.+||+|++++|+|..|..+++..|++++.++.+ +.++.+|++.+++.+++.+++++++++++||||
T Consensus 102 ~al~~~--~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~-~~~~~~d~~~l~~~~~~~~~~~~~i~l~~P~NP 178 (391)
T PRK07309 102 EALSAS--LTAILEPGDKVLLPAPAYPGYEPIVNLVGAEIVEIDTT-ENDFVLTPEMLEKAILEQGDKLKAVILNYPANP 178 (391)
T ss_pred HHHHHH--HHHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEEecC-CcCCcCCHHHHHHHhhccCCCeEEEEEECCCCC
Confidence 999998 44456799999999999999999999999999999874 445789999999998754446788999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecC
Q 012238 242 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 321 (467)
Q Consensus 242 TG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~ 321 (467)
||.+++.+++++|+++|++||+++|+||+|.++.+++. ...++..+ ..+++++++||||.||+||+|+||++ +
T Consensus 179 tG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~--~~~~~~~~--~~~~~i~~~S~SK~~g~~GlRvG~~v---~ 251 (391)
T PRK07309 179 TGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGE--PHVSIAEY--LPDQTILINGLSKSHAMTGWRIGLIF---A 251 (391)
T ss_pred CCcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCCC--CCCCHHHh--ccCCEEEEecChhhccCccceeEEEE---e
Confidence 99999999999999999999999999999999987431 22222222 23689999999999999999999996 7
Q ss_pred CHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC
Q 012238 322 SSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKS 401 (467)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~ 401 (467)
++++++. +.........+++.+.|.++..+|.+... .....+++++++|+.+.+.|+ +.+
T Consensus 252 ~~~~~~~------------~~~~~~~~~~~~~~~~q~~~~~~l~~~~~------~~~~~~~~~~~~~~~~~~~l~-~~~- 311 (391)
T PRK07309 252 PAEFTAQ------------LIKSHQYLVTAATTMAQFAAVEALTNGKD------DALPMKKEYIKRRDYIIEKMT-DLG- 311 (391)
T ss_pred CHHHHHH------------HHHHHhhcccCCChHHHHHHHHHHhCChh------HHHHHHHHHHHHHHHHHHHHH-HCC-
Confidence 7888887 54443333446777889999888876522 134677888999999999998 776
Q ss_pred CCCcccccCCcceEEecCCC-------HHHHHHHHHcccEEEeCCC----------eEEeccCChhhHHHHHHHHHHHHH
Q 012238 402 GKDWSFILRQIGMFSFTGLN-------KAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEYLADAIIDSYH 464 (467)
Q Consensus 402 ~~~~~~~~~~~g~f~~~~l~-------~~~~~~ll~~~gI~v~~gg----------Ris~~~~~~~~i~~~~~~l~~~l~ 464 (467)
+.+..|++|+|+|+.+. .++++++++++||.+.||. ||+++. +.++++.++++|+++++
T Consensus 312 ---~~~~~p~gg~~~~~~l~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~~~l~~~i~~l~~~~~ 387 (391)
T PRK07309 312 ---FKIIKPDGAFYIFAKIPAGYNQDSFKFLQDFARKKAVAFIPGAAFGPYGEGYVRLSYAA-SMETIKEAMKRLKEYME 387 (391)
T ss_pred ---CeecCCCeeEEEEEECCCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC-CHHHHHHHHHHHHHHHH
Confidence 57788999999997542 3456677777899999872 999997 78899999999999987
Q ss_pred hc
Q 012238 465 NV 466 (467)
Q Consensus 465 ~~ 466 (467)
++
T Consensus 388 ~~ 389 (391)
T PRK07309 388 EH 389 (391)
T ss_pred hh
Confidence 64
No 42
>PRK07324 transaminase; Validated
Probab=100.00 E-value=2.6e-46 Score=373.57 Aligned_cols=334 Identities=16% Similarity=0.131 Sum_probs=275.3
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCch
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (467)
+.++++|++|+| .++. ++.+ +++.+.+.... ..|++..|.++||+++|+++.+ +++++|++ |+|++
T Consensus 25 ~~~~~~~~~~e~----~~~~-~~~~-~~~~~~~~~~~-~~Y~~~~G~~~lr~~ia~~~~~-----~~~~~vi~--t~G~~ 90 (373)
T PRK07324 25 ESCIDSLTLEEL----LALA-GKNP-EAFYQELGQKK-LTYGWIEGSPEFKEAVASLYQN-----VKPENILQ--TNGAT 90 (373)
T ss_pred cCCCCCCcHHHH----Hhcc-Ccch-HHHHHHHhcCC-ccCCCCCCCHHHHHHHHHHhcC-----CChhhEEE--cCChH
Confidence 458999999998 3333 4455 66666665543 7899999999999999999753 34789999 99999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCC
Q 012238 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 241 (467)
Q Consensus 162 ~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NP 241 (467)
+++.++ +...+.+||+|+++.|+|..+...++..|++++.+|++++.++.+|++.+++.+. ++++++++++||||
T Consensus 91 ~al~~~--~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~---~~~kli~i~~p~NP 165 (373)
T PRK07324 91 GANFLV--LYALVEPGDHVISVYPTYQQLYDIPESLGAEVDYWQLKEENGWLPDLDELRRLVR---PNTKLICINNANNP 165 (373)
T ss_pred HHHHHH--HHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHhCC---CCCcEEEEeCCCCC
Confidence 999998 4445779999999999999999999999999999999755667899999988876 56789999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecC
Q 012238 242 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 321 (467)
Q Consensus 242 TG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~ 321 (467)
||.+++.+++++|+++|++||++||+||+|.++.++. ...+ +.+..+++|+++||||.||++|+|+||++ +
T Consensus 166 tG~~~~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~---~~~s---~~~~~~~~I~~~s~SK~~~~~G~RiG~i~---~ 236 (373)
T PRK07324 166 TGALMDRAYLEEIVEIARSVDAYVLSDEVYRPLDEDG---STPS---IADLYEKGISTNSMSKTYSLPGIRVGWIA---A 236 (373)
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCC---CCCC---hhhccCCEEEEecchhhcCCccceeEEEe---c
Confidence 9999999999999999999999999999999998753 1222 22334678999999999999999999996 6
Q ss_pred CHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC
Q 012238 322 SSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKS 401 (467)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~ 401 (467)
+++++++ +++.......+++.+.|.++..+|++. ++.++++++.++++++.+.+.|+ +.+
T Consensus 237 ~~~li~~------------~~~~~~~~~~~~~~~~q~~a~~~l~~~------~~~l~~~~~~~~~~~~~l~~~l~-~~~- 296 (373)
T PRK07324 237 NEEVIDI------------LRKYRDYTMICAGVFDDMLASLALEHR------DAILERNRKIVRTNLAILDEWVA-KEP- 296 (373)
T ss_pred CHHHHHH------------HHHHhCcEEecCChHHHHHHHHHHcCH------HHHHHHHHHHHHHHHHHHHHHHh-cCC-
Confidence 8888887 666665555677788888888888653 34577888999999999999998 653
Q ss_pred CCCcccccCCcceEEecCC-----CHHHHHHHHHcccEEEeCCC--------eEEeccCChhhHHHHHHHHHHHHHhc
Q 012238 402 GKDWSFILRQIGMFSFTGL-----NKAQSDNMTNKWHVYMTKDG--------RISLAGLSLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 402 ~~~~~~~~~~~g~f~~~~l-----~~~~~~~ll~~~gI~v~~gg--------Ris~~~~~~~~i~~~~~~l~~~l~~~ 466 (467)
.+.+..|++|+|.|+.+ +.++++++++++||.+.||. ||||+. +++.+++++++|.+++++.
T Consensus 297 --~~~~~~p~gg~~~~i~~~~~~~~~~~~~~ll~~~gv~v~pg~~F~~~~~iRis~~~-~~~~l~~~l~rl~~~l~~~ 371 (373)
T PRK07324 297 --RVSYVKPKAVSTSFVKLDVDMPSEDFCLKLLKETGVLLVPGNRFDLEGHVRIGYCC-DTETLKKGLKKLSEFLREF 371 (373)
T ss_pred --CceEECCCceEEEEEEeCCCCCHHHHHHHHHHhcCEEEECccccCCCCeEEEEecC-CHHHHHHHHHHHHHHHHhc
Confidence 25677888888766633 34678888888899999982 999998 7899999999999998764
No 43
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=9.7e-46 Score=375.39 Aligned_cols=351 Identities=16% Similarity=0.209 Sum_probs=279.3
Q ss_pred cCCCC-CcEEecCcccCCCCCCCCchHHHHHHHHHHHh-----------cCCCCcCCCCcchHHHHHHHHHHHhCCCC--
Q 012238 79 ADTDE-KKLNLGVGAYRTEELQPYVLDVVKKAENLMLE-----------RGENKEYLPIEGLAAFNKVTAELLFGADN-- 144 (467)
Q Consensus 79 ~~~~~-~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~-----------~~~~~~Y~~~~G~~~lr~aia~~l~~~~~-- 144 (467)
...+| ++|||++.++ .. ..+.+.+.+++..+ ......|.+..|.++||+++|+++....+
T Consensus 42 ~~~np~g~i~l~~aeN----~l--~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~~~~ 115 (447)
T PLN02607 42 ESHNPSGVIQMGLAEN----QV--SFDLLEEYLKQHPEASSWGGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGK 115 (447)
T ss_pred cccCCCceEEEechhh----hh--hHHHHHHHHHhCchhhccccccccccchhhccCCCcchHHHHHHHHHHHHHhcCCC
Confidence 33455 5999999876 22 35666666655432 01123477889999999999999987655
Q ss_pred cccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHh-hCCCCeEEeeeecCCCCCCChhhHHHHH
Q 012238 145 SVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-DARVPWSEYRYYDPKTVGLDFEGMIADI 223 (467)
Q Consensus 145 ~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~-~~G~~~~~v~~~~~~~~~~d~~~l~~~l 223 (467)
..+++++|++ |+|++++++++ +...+.|||.|+++.|+|+.|...++ ..|+++++++++.++++.+|++.+++++
T Consensus 116 ~~v~p~~Ivi--t~G~t~al~~l--~~~l~~pGD~Vlv~~P~Y~~f~~~~~~~~g~~vv~v~~~~~~~f~~~~~~le~a~ 191 (447)
T PLN02607 116 ARFDPDRIVL--TAGATAANELL--TFILADPGDALLVPTPYYPGFDRDLRWRTGVKIVPIHCDSSNNFQVTPQALEAAY 191 (447)
T ss_pred CCcCHHHeEE--cCChHHHHHHH--HHHhCCCCCEEEEcCCCCcchHHHHHhcCCcEEEEEeCCCCCCCcCCHHHHHHHH
Confidence 3588999999 99999999997 34456799999999999999988887 5899999999865567789999999998
Q ss_pred HcC---CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHh------cCC
Q 012238 224 KAA---PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT------RGM 294 (467)
Q Consensus 224 ~~~---~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~------~~~ 294 (467)
++. ..++++++++|||||||.+++++++++|+++|++||++||+||+|.++.+++. +..++..+.. ..+
T Consensus 192 ~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~~--~f~S~~s~~~~~~~~~~~~ 269 (447)
T PLN02607 192 QEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSAS--EFVSVAEIVEARGYKGVAE 269 (447)
T ss_pred HHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccCCC--CcccHHHHHhhcCCCCCcC
Confidence 742 24678899999999999999999999999999999999999999999887642 2223333321 146
Q ss_pred eEEEEecCccCcccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHH
Q 012238 295 ELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWK 374 (467)
Q Consensus 295 ~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~ 374 (467)
+++++.||||.||++|+|+||++ +.++++++. ++.... +..++.+.|.++..+|+++++.+
T Consensus 270 ~v~vi~s~SK~fg~~GlRvG~iv--s~n~~l~~~------------~~~~~~--~~~~s~~~q~~~~~~L~d~~~~~--- 330 (447)
T PLN02607 270 RVHIVYSLSKDLGLPGFRVGTIY--SYNDKVVTT------------ARRMSS--FTLVSSQTQHLLASMLSDEEFTE--- 330 (447)
T ss_pred cEEEEEcchhcCCCCcceEEEEE--EcCHHHHHH------------HHHHhh--cCCCCHHHHHHHHHHhCCchhHH---
Confidence 89999999999999999999996 446666665 443322 33567889999999999876643
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceEEecCCCH-----------HHHHHHHHcccEEEeCC----
Q 012238 375 AEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNK-----------AQSDNMTNKWHVYMTKD---- 439 (467)
Q Consensus 375 ~~l~~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~~~g~f~~~~l~~-----------~~~~~ll~~~gI~v~~g---- 439 (467)
+++.+.+++++++++.+.+.|+ +.| +.+..+++|+|+|+++.. ++++++++++||.+.||
T Consensus 331 ~~l~~~r~~l~~~~~~~~~~L~-~~g----i~~~~~~ag~fvw~~L~~~~~~~~~~~e~~l~~~ll~~~gV~v~pG~~f~ 405 (447)
T PLN02607 331 NYIRTNRERLRKRYEMIVQGLR-RAG----IECLKGNAGLFCWMNLSPLLETPTREGELALWDSILREVKLNISPGSSCH 405 (447)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-hCC----CCcccCCeeEEEEEEchHhhcCCCchhHHHHHHHHHHhCCEEEcCccccC
Confidence 3477889999999999999999 877 467789999999997631 23567887789999998
Q ss_pred ----C--eEEeccCChhhHHHHHHHHHHHHHh
Q 012238 440 ----G--RISLAGLSLAKCEYLADAIIDSYHN 465 (467)
Q Consensus 440 ----g--Ris~~~~~~~~i~~~~~~l~~~l~~ 465 (467)
| ||+|+..+++++++++++|.+++++
T Consensus 406 ~~~~g~fRi~fa~~~~~~l~~gl~Ri~~~l~~ 437 (447)
T PLN02607 406 CSEPGWFRVCFANMSEDTLEVALKRIHRFMDR 437 (447)
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHHHHHHHHH
Confidence 2 9999987889999999999999864
No 44
>PRK07683 aminotransferase A; Validated
Probab=100.00 E-value=8.6e-46 Score=371.93 Aligned_cols=339 Identities=16% Similarity=0.184 Sum_probs=278.7
Q ss_pred CCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccC-ceeeeecCCch
Q 012238 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQ-RVATVQGLSGT 161 (467)
Q Consensus 83 ~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~-~i~~~~t~ggt 161 (467)
++.|+|+.|.| ..++ ++.+.+++.+.+... ...|.+..|.++||+++++++...+|..++++ +|++ |+|++
T Consensus 28 ~~~i~l~~~~p----~~~~-~~~~~~a~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~~I~~--t~G~~ 99 (387)
T PRK07683 28 DNLISLTIGQP----DFPT-PSHVKEAAKRAITEN-YTSYTHNAGLLELRKAACNFVKDKYDLHYSPESEIIV--TIGAS 99 (387)
T ss_pred CCeEEecCCCC----CCCC-CHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEE--eCChH
Confidence 57899999987 4443 678889998887654 37898899999999999999987777778888 9999 99999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCC
Q 012238 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 241 (467)
Q Consensus 162 ~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NP 241 (467)
+++.++ +...+.+||+|++++|+|..|...++..|++++.++.+ ++++.+|.+.+++.+. ++++++++++||||
T Consensus 100 ~al~~~--~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~l~~~~~---~~~~~i~i~~p~NP 173 (387)
T PRK07683 100 EAIDIA--FRTILEPGTEVILPAPIYPGYEPIIRLCGAKPVFIDTR-STGFRLTAEALENAIT---EKTRCVVLPYPSNP 173 (387)
T ss_pred HHHHHH--HHHhCCCCCEEEEcCCCccchHHHHHHcCCEEEEeecC-cccCCCCHHHHHHhcC---cCceEEEEeCCCCC
Confidence 999997 33446799999999999999999999999999999885 4567788899999886 46778899999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecC
Q 012238 242 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 321 (467)
Q Consensus 242 TG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~ 321 (467)
||.+++.+++++|+++|+++|++||+||+|+++.+++. ..++..+.+..+++++++||||.||+||+|+||++ +
T Consensus 174 tG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~---~~~~~~~~~~~~~vi~~~s~SK~~~~pGlRiG~i~---~ 247 (387)
T PRK07683 174 TGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQP---HTSIAHFPEMREKTIVINGLSKSHSMTGWRIGFLF---A 247 (387)
T ss_pred CCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCCC---cCChhhccCCcCCeEEEeeccccccCccceeEEEE---c
Confidence 99999999999999999999999999999999987531 22333332334689999999999999999999996 7
Q ss_pred CHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC
Q 012238 322 SSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKS 401 (467)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~ 401 (467)
+++++++ +.........+++.+.|.++..+|.++. .++++.+++++++++.+.+.|. +.+
T Consensus 248 ~~~l~~~------------~~~~~~~~~~~~~~~~q~~~~~~l~~~~------~~~~~~~~~~~~~~~~~~~~l~-~~~- 307 (387)
T PRK07683 248 PSYLAKH------------ILKVHQYNVTCASSISQYAALEALTAGK------DDAKMMRHQYKKRRDYVYNRLI-SMG- 307 (387)
T ss_pred CHHHHHH------------HHHHHHhccCCCChHHHHHHHHHHhCCh------HHHHHHHHHHHHHHHHHHHHHH-HcC-
Confidence 8888887 4444333344567788889988887652 2366788899999999999998 765
Q ss_pred CCCcccccCCcceEEecCC-----C-HHHHHHHHHcccEEEeCCC----------eEEeccCChhhHHHHHHHHHHHHHh
Q 012238 402 GKDWSFILRQIGMFSFTGL-----N-KAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEYLADAIIDSYHN 465 (467)
Q Consensus 402 ~~~~~~~~~~~g~f~~~~l-----~-~~~~~~ll~~~gI~v~~gg----------Ris~~~~~~~~i~~~~~~l~~~l~~ 465 (467)
+.+..+++|+|+|..+ + .+++.++++++||.+.||. ||+++. ++++++.++++|.+++++
T Consensus 308 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~Ri~~~~-~~~~~~~al~~l~~~l~~ 383 (387)
T PRK07683 308 ---LDVEKPTGAFYLFPSIGHFTMSSFDFALDLVEEAGLAVVPGSAFSEYGEGYVRLSYAY-SIETLKEGLDRLEAFLQQ 383 (387)
T ss_pred ---CcccCCCeeEEEEEecccCCCCHHHHHHHHHHhCCEEEcCchhhCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHHh
Confidence 5777899999999743 2 3456677888899999971 999998 889999999999998763
No 45
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=1.4e-45 Score=378.29 Aligned_cols=348 Identities=16% Similarity=0.170 Sum_probs=272.0
Q ss_pred CcEEecCcccCCCCCC--CCchHHHHHHHHHHH--h-----cCCCCcCCCCcchHHHHHHHHHHHhCCCC--cccccCce
Q 012238 84 KKLNLGVGAYRTEELQ--PYVLDVVKKAENLML--E-----RGENKEYLPIEGLAAFNKVTAELLFGADN--SVLKEQRV 152 (467)
Q Consensus 84 ~~i~l~~G~~~d~~~~--p~~~~~v~~a~~~~~--~-----~~~~~~Y~~~~G~~~lr~aia~~l~~~~~--~~~~~~~i 152 (467)
++|+|+..++ .. +.+.+.+++.....+ . -.....|.+..|.++||+++|+++....| ..+++++|
T Consensus 47 g~i~l~~aEN----~l~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~g~~v~v~pe~I 122 (496)
T PLN02376 47 GIIQMGLAEN----QLCLDLIKDWVKENPEASICTLEGIHQFSDIANFQDYHGLKKFRQAIAHFMGKARGGKVTFDPERV 122 (496)
T ss_pred ceEEeecchh----hhhHHHHHHHHHhCchhhccccccccccchhhccCCCCCcHHHHHHHHHHHHHHhCCCCcCChhhE
Confidence 6999998865 32 222344444332211 0 01124588889999999999999987666 56889999
Q ss_pred eeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHh-hCCCCeEEeeeecCCCCCCChhhHHHHHHcC---CC
Q 012238 153 ATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-DARVPWSEYRYYDPKTVGLDFEGMIADIKAA---PG 228 (467)
Q Consensus 153 ~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~-~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~---~~ 228 (467)
++ |+|+++++.++ +...+.|||.|++++|+|+.|...++ ..|++++.++++.++++++|++.++++++.. ..
T Consensus 123 vi--t~Ga~~al~~l--~~~l~~pGD~Vlv~~P~Y~~~~~~~~~~~G~~vv~v~~~~~~~~~~~~~~le~a~~~a~~~~~ 198 (496)
T PLN02376 123 VM--SGGATGANETI--MFCLADPGDVFLIPSPYYAAFDRDLRWRTGVEIIPVPCSSSDNFKLTVDAADWAYKKAQESNK 198 (496)
T ss_pred EE--ccchHHHHHHH--HHHhCCCCCEEEECCCCccchHHHHHhhCCCEEEEEeCCCCccCcCCHHHHHHHHHHHHhcCC
Confidence 99 99999999998 44457899999999999999999887 5899999999965567899999998775431 24
Q ss_pred CcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhc-------CCeEEEEec
Q 012238 229 GSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR-------GMELLVAQS 301 (467)
Q Consensus 229 ~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~-------~~~~i~~~S 301 (467)
++++++++|||||||.+++.+++++|+++|++||++||+||+|.++.|++. +..++..+... .+++++++|
T Consensus 199 ~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~~--~~~si~~l~~~~~~~~~~~~~v~vv~S 276 (496)
T PLN02376 199 KVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGG--DFVSVAEVVNDVDISEVNVDLIHIVYS 276 (496)
T ss_pred CeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccCCC--CcccHHHhhccccccccCCCeEEEEEe
Confidence 678888999999999999999999999999999999999999999987642 22344344321 135778999
Q ss_pred CccCcccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHH
Q 012238 302 YSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMA 381 (467)
Q Consensus 302 ~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~ 381 (467)
|||.||+||+|+||++ +.++.+.+. ++.... ...++.+.|.++..+|+++.+. ++++++.+
T Consensus 277 ~SK~~glpGlRvG~li--~~~~~l~~~------------~~~~~~--~~~vs~~~Q~a~~~~L~d~~~~---~~~l~~~r 337 (496)
T PLN02376 277 LSKDMGLPGFRVGIVY--SFNDSVVSC------------ARKMSS--FGLVSSQTQLMLASMLSDDQFV---DNFLMESS 337 (496)
T ss_pred ccccCCCCcceEEEEE--ECCHHHHHH------------HHHHhh--cCCCCHHHHHHHHHHhCChhHH---HHHHHHHH
Confidence 9999999999999996 445655554 333322 3357888999999999887543 34578889
Q ss_pred HHHHHHHHHHHHHhhhccCCCCCcccccCCcceEEecCCC------------HHHHHHHHHcccEEEeCC--------C-
Q 012238 382 GRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLN------------KAQSDNMTNKWHVYMTKD--------G- 440 (467)
Q Consensus 382 ~~~~~~r~~l~~~l~~~~g~~~~~~~~~~~~g~f~~~~l~------------~~~~~~ll~~~gI~v~~g--------g- 440 (467)
++++++++.+.+.|+ +.| +.+..+++|+|+|+++. .++++.++++.||.+.|| |
T Consensus 338 ~~l~~r~~~l~~~L~-~~g----i~~~~~~aG~flwi~l~~~~~~~~~~~~e~~l~~~ll~~~gV~v~pGs~F~~~~~g~ 412 (496)
T PLN02376 338 RRLGIRHKVFTTGIK-KAD----IACLTSNAGLFAWMDLRHLLRDRNSFESEIELWHIIIDKVKLNVSPGSSFRCTEPGW 412 (496)
T ss_pred HHHHHHHHHHHHHHH-HCC----CcccCCCceEEEEEEchhhhccCCchhHHHHHHHHHHHcCCEEEeCccccCCCCCCE
Confidence 999999999999999 776 57788999999999762 234667777789999998 2
Q ss_pred -eEEeccCChhhHHHHHHHHHHHHHh
Q 012238 441 -RISLAGLSLAKCEYLADAIIDSYHN 465 (467)
Q Consensus 441 -Ris~~~~~~~~i~~~~~~l~~~l~~ 465 (467)
||+|+.+++++++.++++|++++.+
T Consensus 413 ~Ri~fa~~~~~~l~~al~rl~~~l~~ 438 (496)
T PLN02376 413 FRICFANMDDDTLHVALGRIQDFVSK 438 (496)
T ss_pred EEEEeeCCCHHHHHHHHHHHHHHHHH
Confidence 9999977889999999999998853
No 46
>PRK08912 hypothetical protein; Provisional
Probab=100.00 E-value=1.1e-45 Score=371.52 Aligned_cols=340 Identities=18% Similarity=0.169 Sum_probs=273.4
Q ss_pred CCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccC-ceeeeecCCch
Q 012238 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQ-RVATVQGLSGT 161 (467)
Q Consensus 83 ~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~-~i~~~~t~ggt 161 (467)
+++|+|+.|.| ..+. ++.+.+++.+.+... ...|.+..|.++||+++++++...+|..++++ +|++ |+|++
T Consensus 26 ~~~i~l~~g~p----~~~~-p~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~i~~--t~G~~ 97 (387)
T PRK08912 26 HGAINLGQGFP----DDPG-PEDVRRAAADALLDG-SNQYPPMMGLPELRQAVAAHYARFQGLDLDPETEVMV--TSGAT 97 (387)
T ss_pred CCeEEccCCCC----CCCC-CHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcccEEE--eCCcH
Confidence 47899999998 3343 556777776665444 37799999999999999999887777778888 9999 99999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCC
Q 012238 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 241 (467)
Q Consensus 162 ~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NP 241 (467)
+++.++ +...+.+||+|++++|+|+.|...++..|++++.++++ ++++++|++.+++.+. ++++++++++||||
T Consensus 98 ~al~~~--~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~l~~~~~---~~~~~v~l~~p~NP 171 (387)
T PRK08912 98 EALAAA--LLALVEPGDEVVLFQPLYDAYLPLIRRAGGVPRLVRLE-PPHWRLPRAALAAAFS---PRTKAVLLNNPLNP 171 (387)
T ss_pred HHHHHH--HHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecC-cccCcCCHHHHHHHhC---ccceEEEEeCCCCC
Confidence 999887 44456799999999999999999999999999999984 3467899999999886 46778888999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecC
Q 012238 242 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 321 (467)
Q Consensus 242 TG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~ 321 (467)
||.+++.+++++|+++|++||++||+||+|.++.+++. ...++..+....+++++++||||.||++|+|+||++ +
T Consensus 172 tG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~--~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~---~ 246 (387)
T PRK08912 172 AGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGR--RHIPLMTLPGMRERTVKIGSAGKIFSLTGWKVGFVC---A 246 (387)
T ss_pred cCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCC--CCcChhhCCCccCceEEEeechhhccCcCceeEEEe---c
Confidence 99999999999999999999999999999999887531 112222222224689999999999999999999996 7
Q ss_pred CHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC
Q 012238 322 SSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKS 401 (467)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~ 401 (467)
++++++. +.........+.+...|.++...|... .+++++.+++++++++.+.+.|+ ..|
T Consensus 247 ~~~~~~~------------l~~~~~~~~~~~~~~~q~~~~~~l~~~------~~~~~~~~~~~~~~~~~l~~~L~-~~g- 306 (387)
T PRK08912 247 APPLLRV------------LAKAHQFLTFTTPPNLQAAVAYGLGKP------DDYFEGMRADLARSRDRLAAGLR-RIG- 306 (387)
T ss_pred CHHHHHH------------HHHHHhhccccCChHHHHHHHHHHhCC------HHHHHHHHHHHHHHHHHHHHHHH-hCC-
Confidence 7888877 554444333445555677776666432 23356788999999999999999 776
Q ss_pred CCCcccccCCcceEEecCCC-------H-HHHHHHHHcccEEEeCC----------C--eEEeccCChhhHHHHHHHHHH
Q 012238 402 GKDWSFILRQIGMFSFTGLN-------K-AQSDNMTNKWHVYMTKD----------G--RISLAGLSLAKCEYLADAIID 461 (467)
Q Consensus 402 ~~~~~~~~~~~g~f~~~~l~-------~-~~~~~ll~~~gI~v~~g----------g--Ris~~~~~~~~i~~~~~~l~~ 461 (467)
+.+.++++|||+|+.+. . ++++++++++||.+.|| + ||+|+. ++++++.++++|.+
T Consensus 307 ---~~~~~~~g~~~l~~~l~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~iRl~~~~-~~~~l~~~l~rl~~ 382 (387)
T PRK08912 307 ---FPVLPSQGTYFLTVDLAPLGLAEDDVAFCRRLVEEAGVAAIPVSAFYEEDPVTSVVRFCFAK-RDATLDEAVERLAA 382 (387)
T ss_pred ---CcccCCCcceEEEecccccCCCCCHHHHHHHHHhcCCEEEecchhhCCCCCCCCEEEEEEeC-CHHHHHHHHHHHHH
Confidence 57778899999998552 2 45777777789999986 1 999998 78999999999999
Q ss_pred HHHh
Q 012238 462 SYHN 465 (467)
Q Consensus 462 ~l~~ 465 (467)
++++
T Consensus 383 ~l~~ 386 (387)
T PRK08912 383 ARRR 386 (387)
T ss_pred HHhc
Confidence 8764
No 47
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=100.00 E-value=2.2e-45 Score=371.72 Aligned_cols=347 Identities=16% Similarity=0.148 Sum_probs=265.8
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhc----CCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeec
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER----GENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQG 157 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~----~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t 157 (467)
++++++|+.|++ ..++ ++.+.+++.+.+.. .....|.|..|.++||+++|+++...+|..+++++|++ |
T Consensus 33 ~~~~i~l~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~i--t 105 (409)
T PRK07590 33 EAKIIRLGIGDV----TQPL-PPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARGCDISADEIFI--S 105 (409)
T ss_pred CCceEEecCcCC----CCCC-CHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHHhcCCcCChhhEEE--C
Confidence 457999999988 4444 67788888877643 13368999999999999999998877888899999999 9
Q ss_pred CCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCC-----------eEEeeeecCCCCCCChhhHHHHHHcC
Q 012238 158 LSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVP-----------WSEYRYYDPKTVGLDFEGMIADIKAA 226 (467)
Q Consensus 158 ~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~-----------~~~v~~~~~~~~~~d~~~l~~~l~~~ 226 (467)
+|+++++.++ +..+.|||+|++++|+|+.|...++..|.+ ++.+++++++++.+|++.
T Consensus 106 ~Ga~~al~~l---~~~~~~gd~V~v~~P~Y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~-------- 174 (409)
T PRK07590 106 DGAKCDTGNI---LDIFGPDNTIAVTDPVYPVYVDTNVMAGRTGEANEDGRYSGIVYLPCTAENNFVPELPE-------- 174 (409)
T ss_pred CCHHHHHHHH---HHhcCCCCEEEEeCCCCcchHHHHHHcCCcccccccccccceeEeecccccCCcccCcc--------
Confidence 9999999985 445679999999999999999999999997 888988544445454321
Q ss_pred CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCc
Q 012238 227 PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL 306 (467)
Q Consensus 227 ~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~ 306 (467)
.+++++++++||||||.+++.+++++|+++|++||++||+||+|.++.++.. ...++..+....+++|+++||||+|
T Consensus 175 -~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~--~~~~~~~~~~~~~~vi~~~SfSK~~ 251 (409)
T PRK07590 175 -EKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPS--LPHSIYEIEGARECAIEFRSFSKTA 251 (409)
T ss_pred -cCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCC--CCcchhhCCCcccceEEEecCcccc
Confidence 4667888899999999999999999999999999999999999999987531 1122322212234799999999999
Q ss_pred ccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHH
Q 012238 307 GLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKN 386 (467)
Q Consensus 307 ~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~ 386 (467)
|+||+|+||++ +++++++.........+...+.......+.+++.+.|.++..++.+.. .+++++.++.+++
T Consensus 252 ~~pGlRiG~~i---~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~-----~~~~~~~~~~~~~ 323 (409)
T PRK07590 252 GFTGTRCAYTV---VPKELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYSPEG-----KAQIKELIDYYME 323 (409)
T ss_pred CCcCceeEEEE---cCHHHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhcCCc-----HHHHHHHHHHHHH
Confidence 99999999996 777777620000000000111222222234578889999888887532 2347788999999
Q ss_pred HHHHHHHHhhhccCCCCCcccccCCcceEEecCC----C-HHHHHHHHHcccEEEeCCC----------eEEeccCChhh
Q 012238 387 VRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL----N-KAQSDNMTNKWHVYMTKDG----------RISLAGLSLAK 451 (467)
Q Consensus 387 ~r~~l~~~l~~~~g~~~~~~~~~~~~g~f~~~~l----~-~~~~~~ll~~~gI~v~~gg----------Ris~~~~~~~~ 451 (467)
+|+.+.+.|+ ..+ +.+..+.+|+|+|+.+ + .+++.++++++||.+.||. ||+++. ++++
T Consensus 324 ~r~~l~~~L~-~~~----~~~~~~~g~~f~wi~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~~~ 397 (409)
T PRK07590 324 NAKIIREGLE-SAG----FEVYGGVNAPYIWVKTPDGMSSWDFFDKLLQEANVVGTPGSGFGPSGEGYFRLSAFG-SREN 397 (409)
T ss_pred HHHHHHHHHH-hcC----CceecCCcceEEEEECCCCCCHHHHHHHHHHHCCEEEeChhHhCCCCCCEEEEEccC-CHHH
Confidence 9999999999 775 5677788999999865 2 4567778877899999871 999866 7899
Q ss_pred HHHHHHHHHHHH
Q 012238 452 CEYLADAIIDSY 463 (467)
Q Consensus 452 i~~~~~~l~~~l 463 (467)
++.++++|.+++
T Consensus 398 l~~~l~rl~~~~ 409 (409)
T PRK07590 398 VLEAMERIKKAL 409 (409)
T ss_pred HHHHHHHHHhhC
Confidence 999999998753
No 48
>PRK05764 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.5e-45 Score=368.91 Aligned_cols=367 Identities=20% Similarity=0.225 Sum_probs=296.3
Q ss_pred cccCCCCCCCCcccchHHHhhc--CCCCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHH
Q 012238 58 RFEGVTMAPPDPILGVSEAFKA--DTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVT 135 (467)
Q Consensus 58 ~~~~~~~~~~~~i~~~~~~~~~--~~~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~ai 135 (467)
+++++...+++++.++.+..++ ...+++++|+.|.| ..++ ++.+.+++.+.+.... ..|.+..|.++||+++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~-~~~~~~~~~~~~~~~~-~~Y~~~~g~~~lr~~i 77 (393)
T PRK05764 4 LSKRVSRVTPSATLAVTAKAKELKAQGRDVISLGAGEP----DFDT-PEHIKEAAIEALDDGK-TKYTPAAGIPELREAI 77 (393)
T ss_pred hhhhhhhcCchHHHHHHHHHHHHHhccCCEEEeCCCCC----CCCC-CHHHHHHHHHHHhcCC-CCcCCCCChHHHHHHH
Confidence 4566666677776554444331 23357999999998 4444 6788898888775543 5699999999999999
Q ss_pred HHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCC
Q 012238 136 AELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLD 215 (467)
Q Consensus 136 a~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d 215 (467)
++++...+|..+++++|++ |+|+++++.++ +...+.+||+|++++|+|..|..+++..|++++.++++++.++.+|
T Consensus 78 a~~~~~~~~~~~~~~~i~~--~~g~~~a~~~~--~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d 153 (393)
T PRK05764 78 AAKLKRDNGLDYDPSQVIV--TTGAKQALYNA--FMALLDPGDEVIIPAPYWVSYPEMVKLAGGVPVFVPTGEENGFKLT 153 (393)
T ss_pred HHHHHHHhCCCCCHHHEEE--eCCcHHHHHHH--HHHhcCCCCEEEecCCCCcchHHHHHHcCCEEEEEecCcccCCcCC
Confidence 9999777677777899999 99999999987 4445779999999999999999999999999999998655567899
Q ss_pred hhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHH-HhcCC
Q 012238 216 FEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF-ATRGM 294 (467)
Q Consensus 216 ~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~-~~~~~ 294 (467)
++.+++.++ ++++++++++||||||.+++.+++++|+++|++||+++|+||+|.++.+++. ...++..+ .+..+
T Consensus 154 ~~~l~~~l~---~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~--~~~~~~~~~~~~~~ 228 (393)
T PRK05764 154 VEQLEAAIT---PKTKALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGA--EFTSIASLSPELRD 228 (393)
T ss_pred HHHHHHhhC---ccceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCC--CcccHHHcCCCCcC
Confidence 999999886 4677888999999999999999999999999999999999999999887531 11223233 23346
Q ss_pred eEEEEecCccCcccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHH
Q 012238 295 ELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWK 374 (467)
Q Consensus 295 ~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~ 374 (467)
++++++||||.++++|+|+||++ +++++++. +.........+++.+.|.++..+|++. .
T Consensus 229 ~~i~~~s~SK~~~~~G~RiG~i~---~~~~~~~~------------~~~~~~~~~~~~~~~~q~~~~~~l~~~------~ 287 (393)
T PRK05764 229 RTITVNGFSKAYAMTGWRLGYAA---GPKELIKA------------MSKLQSHSTSNPTSIAQYAAVAALNGP------Q 287 (393)
T ss_pred CEEEEecCcccccCccceeEEEe---cCHHHHHH------------HHHHHhhcccCCChHHHHHHHHHHcCC------h
Confidence 89999999999999999999995 78888887 655555556678888898888888631 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcc-CCCCCcccccCCcceEEecCCC----------HHHHHHHHHcccEEEeCCC---
Q 012238 375 AEMEMMAGRIKNVRQKLFDSLSAKD-KSGKDWSFILRQIGMFSFTGLN----------KAQSDNMTNKWHVYMTKDG--- 440 (467)
Q Consensus 375 ~~l~~~~~~~~~~r~~l~~~l~~~~-g~~~~~~~~~~~~g~f~~~~l~----------~~~~~~ll~~~gI~v~~gg--- 440 (467)
+++++.++.++++++.+.+.|+ ++ | +.+..|+||+|+|+.+. .++.+.+++++||.+.+|.
T Consensus 288 ~~~~~~~~~~~~~~~~l~~~L~-~~~g----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~ 362 (393)
T PRK05764 288 DEVEEMRQAFEERRDLMVDGLN-EIPG----LECPKPEGAFYVFPNVSKLLGKSITDSLEFAEALLEEAGVAVVPGIAFG 362 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-hCCC----CcccCCCcceEEEEecccccccccCCHHHHHHHHHHhCCEEEccccccC
Confidence 3466788889999999999998 76 4 57778899999997542 4556778887899999872
Q ss_pred -----eEEeccCChhhHHHHHHHHHHHHHhc
Q 012238 441 -----RISLAGLSLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 441 -----Ris~~~~~~~~i~~~~~~l~~~l~~~ 466 (467)
||+++. +++++++++++|.++++++
T Consensus 363 ~~~~vRis~~~-~~~~~~~~i~~l~~~~~~~ 392 (393)
T PRK05764 363 APGYVRLSYAT-SLEDLEEGLERIERFLESL 392 (393)
T ss_pred CCCEEEEEecC-CHHHHHHHHHHHHHHHHhh
Confidence 999998 8999999999999998765
No 49
>PRK09082 methionine aminotransferase; Validated
Probab=100.00 E-value=1e-45 Score=371.42 Aligned_cols=336 Identities=14% Similarity=0.164 Sum_probs=275.4
Q ss_pred CCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccC-ceeeeecCCch
Q 012238 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQ-RVATVQGLSGT 161 (467)
Q Consensus 83 ~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~-~i~~~~t~ggt 161 (467)
.++|+|+.|.+ ..+. ++.+.+++.+.+.... ..|.+..|.+++|+++++++...++..++++ +|++ |+|++
T Consensus 30 ~~~i~l~~g~~----~~~~-~~~~~~~~~~~~~~~~-~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~~~~i~~--t~G~~ 101 (386)
T PRK09082 30 HGAINLSQGFP----DFDG-PPYLVEALAYAMAAGH-NQYPPMTGVAALREAIAAKTARLYGRQYDADSEITV--TAGAT 101 (386)
T ss_pred CCEEEecCCCC----CCCC-CHHHHHHHHHHHHcCC-CCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEE--eCCHH
Confidence 47899999988 4443 6778888888775443 6798899999999999999877667666665 7988 99999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCC
Q 012238 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 241 (467)
Q Consensus 162 ~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NP 241 (467)
+++.++ +...+.+||+|++++|+|..|...++..|++++.++.+ ++++.+|++.+++.++ ++++++++++||||
T Consensus 102 ~al~~~--~~~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~~~~~-~~~~~~d~~~l~~~~~---~~~~~v~l~~p~NP 175 (386)
T PRK09082 102 EALFAA--ILALVRPGDEVIVFDPSYDSYAPAIELAGGRAVRVALQ-PPDFRVDWQRFAAAIS---PRTRLIILNTPHNP 175 (386)
T ss_pred HHHHHH--HHHHcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecC-cccccCCHHHHHHhcC---ccceEEEEeCCCCC
Confidence 999997 44456799999999999999999999999999999985 3468899999999886 46778889999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecC
Q 012238 242 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 321 (467)
Q Consensus 242 TG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~ 321 (467)
||.+++.+++++|+++|++||+++|+||+|.++.+++. ...++..+....+++++++||||.||++|+|+||++ +
T Consensus 176 tG~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~--~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~iv---~ 250 (386)
T PRK09082 176 SGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGA--GHASVLRHPELRERAFVVSSFGKTYHVTGWKVGYCV---A 250 (386)
T ss_pred CCcCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCC--CCCChhhCcCccCcEEEEeechhhccchhhhhhhhh---C
Confidence 99999999999999999999999999999999987531 112222222334689999999999999999999995 7
Q ss_pred CHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC
Q 012238 322 SSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKS 401 (467)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~ 401 (467)
++++++. +++.......+++.+.|.++..++.+. .+++++.++.++++++.+.+.|+ +.+
T Consensus 251 ~~~l~~~------------~~~~~~~~~~~~~~~~q~~~~~~l~~~------~~~~~~~~~~~~~~~~~~~~~L~-~~~- 310 (386)
T PRK09082 251 PAALSAE------------FRKVHQYNTFTVNTPAQLALADYLRAE------PEHYLELPAFYQAKRDRFRAALA-NSR- 310 (386)
T ss_pred CHHHHHH------------HHHHHhhhcCCCChHHHHHHHHHHhCC------hHHHHHHHHHHHHHHHHHHHHHH-hCC-
Confidence 8888887 665554445567888999888888632 23466788999999999999999 765
Q ss_pred CCCcccccCCcceEEecCC------C-HHHHHHHHHcccEEEeCCC------------eEEeccCChhhHHHHHHHHHH
Q 012238 402 GKDWSFILRQIGMFSFTGL------N-KAQSDNMTNKWHVYMTKDG------------RISLAGLSLAKCEYLADAIID 461 (467)
Q Consensus 402 ~~~~~~~~~~~g~f~~~~l------~-~~~~~~ll~~~gI~v~~gg------------Ris~~~~~~~~i~~~~~~l~~ 461 (467)
+.+.+++||+|+|+.+ + .++++++++++||.+.||. ||+|+. +++++++++++|++
T Consensus 311 ---~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~v~pg~~f~~~~~~~~~~Ri~~~~-~~~~l~~~~~rl~~ 385 (386)
T PRK09082 311 ---FKLLPCEGTYFQLVDYSAISDLDDVEFCQWLTREHGVAAIPLSVFYADPFPHRLVRLCFAK-QEETLDAAAERLCQ 385 (386)
T ss_pred ---CcccCCCeeEEEEEeccccCCCCHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCEEEEEecC-CHHHHHHHHHHHhh
Confidence 5778899999999753 2 3456777788899998871 999998 88999999998875
No 50
>PRK05839 hypothetical protein; Provisional
Probab=100.00 E-value=2.6e-45 Score=366.67 Aligned_cols=339 Identities=12% Similarity=0.085 Sum_probs=265.0
Q ss_pred HHHhhcCCCCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCcee
Q 012238 74 SEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVA 153 (467)
Q Consensus 74 ~~~~~~~~~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~ 153 (467)
...++...+.++|+|+.|.| .+++ ++.+.+++.+.... ...|.+..|.++||+++|+++...+|..+++++|+
T Consensus 15 ~~~~~~~~~~~~i~l~~~~p----~~~~-~~~~~~a~~~~~~~--~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~~~~I~ 87 (374)
T PRK05839 15 LKEITPNKEYKGLDLTIGEP----QFET-PKFIQDALKNNAHL--LNKYPKSAGEESLREAQRGFFKRRFKIELKENELI 87 (374)
T ss_pred HHHhhhcCCCCeEEcCCCCC----CCCC-CHHHHHHHHHHhhc--cCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEE
Confidence 33343333448999999998 4444 68888888776532 47798899999999999999988778888899999
Q ss_pred eeecCCchhHHHHHHHHHHHh--CCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcE
Q 012238 154 TVQGLSGTGSLRLAAALIERY--FPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSF 231 (467)
Q Consensus 154 ~~~t~ggt~al~l~~~~l~~~--~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~ 231 (467)
+ |+|+++++.++. ...+ .+||.|++++|+|+.|...++..|++++.+++++++++.+|++.. .+ .+++
T Consensus 88 i--t~G~~~al~~~~--~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~~--~~----~~~k 157 (374)
T PRK05839 88 P--TFGTREVLFNFP--QFVLFDKQNPTIAYPNPFYQIYEGAAIASRAKVLLMPLTKENDFTPSLNEK--EL----QEVD 157 (374)
T ss_pred E--ecCcHHHHHHHH--HHHhcCCCCCEEEECCCCchhhHHHHHhcCCEEEEeecccccCCcCCcchh--hh----cccc
Confidence 9 999999998862 2233 378999999999999999999999999999986455566665443 22 3467
Q ss_pred EEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHH-----hcCCeEEEEecCccCc
Q 012238 232 ILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFA-----TRGMELLVAQSYSKNL 306 (467)
Q Consensus 232 ~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~-----~~~~~~i~~~S~SK~~ 306 (467)
+++++|||||||.+++.+++++|+++|+++|++||+||+|.++.++. ...++.... ...+++|+++||||.|
T Consensus 158 ~v~i~nP~NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~---~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~ 234 (374)
T PRK05839 158 LVILNSPNNPTGRTLSLEELIEWVKLALKHDFILINDECYSEIYENT---PPPSLLEASILVGNESFKNVLVINSISKRS 234 (374)
T ss_pred EEEEeCCCCCcCcccCHHHHHHHHHHHHHcCCEEEeccchhhcccCC---CCCCHhhhhcccCccccCcEEEEecccccc
Confidence 88889999999999999999999999999999999999999986542 111221111 1236899999999999
Q ss_pred ccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHH
Q 012238 307 GLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKN 386 (467)
Q Consensus 307 ~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~ 386 (467)
++||+|+||++ ++++++++ +.........+.+...|.++..++.+. +++++.++++++
T Consensus 235 ~~~GlRiG~ii---~~~~~~~~------------~~~~~~~~~~~~~~~~q~~~~~~l~~~-------~~~~~~~~~~~~ 292 (374)
T PRK05839 235 SAPGLRSGFIA---GDASILKK------------YKAYRTYLGCASPLPLQKAAAVAWLDD-------EHAEFFRNIYAK 292 (374)
T ss_pred CCccceeEEEe---cCHHHHHH------------HHHHHhhcCCCCChHHHHHHHHHhccc-------hHHHHHHHHHHH
Confidence 99999999996 67888877 555544334467777888887777653 235677888888
Q ss_pred HHHHHHHHhhhccCCCCCcccccCCcceEEecCC--CHHHHHHHHHcccEEEeCC----------C--eEEeccCChhhH
Q 012238 387 VRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL--NKAQSDNMTNKWHVYMTKD----------G--RISLAGLSLAKC 452 (467)
Q Consensus 387 ~r~~l~~~l~~~~g~~~~~~~~~~~~g~f~~~~l--~~~~~~~ll~~~gI~v~~g----------g--Ris~~~~~~~~i 452 (467)
+|+.+.+.|. +. .|++|+|+|+++ +.++++++++++||.+.|| + |||++. +++++
T Consensus 293 ~~~~~~~~l~--------~~--~p~gg~fi~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~~~iRis~~~-~~~~~ 361 (374)
T PRK05839 293 NLKLAREILG--------IT--IPPATFYVWLPVDNDEEFTKKLYQNEGIKVLPGSFLGRNGIGKGYVRIALVY-DTPKL 361 (374)
T ss_pred HHHHHHHhcC--------CC--CCCeeEEEEEeCCChHHHHHHHHHHCCEEEeCchhhCCCCCCCCeEEEEecC-CHHHH
Confidence 8888776553 22 678999999987 3566778777789999986 2 999987 78999
Q ss_pred HHHHHHHHHHHHh
Q 012238 453 EYLADAIIDSYHN 465 (467)
Q Consensus 453 ~~~~~~l~~~l~~ 465 (467)
+.++++|.+++++
T Consensus 362 ~~~l~~l~~~l~~ 374 (374)
T PRK05839 362 EKALEIIKTYLEN 374 (374)
T ss_pred HHHHHHHHHHhhC
Confidence 9999999998753
No 51
>PRK08361 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.8e-45 Score=370.44 Aligned_cols=343 Identities=16% Similarity=0.162 Sum_probs=281.6
Q ss_pred CCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchh
Q 012238 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (467)
Q Consensus 83 ~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (467)
+++|+|+.|.| ..++ ++.+.+++.+.+.... ..|.|..|.++||+++|+++...+|..+++++|++ |+|+++
T Consensus 33 ~~~i~l~~~~~----~~~~-~~~~~~~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~--t~G~~~ 104 (391)
T PRK08361 33 ENVISLGIGEP----DFDT-PKNIKEAAKRALDEGW-THYTPNAGIPELREAIAEYYKKFYGVDVDVDNVIV--TAGAYE 104 (391)
T ss_pred cCeEEcCCCCC----CCCC-CHHHHHHHHHHHhcCC-CCCCCCCCcHHHHHHHHHHHHHHhCCCCCcccEEE--eCChHH
Confidence 47899999988 4544 6888888888776543 67988999999999999998766677788999999 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCC
Q 012238 163 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT 242 (467)
Q Consensus 163 al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPT 242 (467)
++.++ +...+.+||+|++++|+|..+...++..|++++.++++++.++.+|++.+++.++ .+++++++++|||||
T Consensus 105 al~~~--~~~l~~~g~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~---~~~~~v~i~~p~NPt 179 (391)
T PRK08361 105 ATYLA--FESLLEEGDEVIIPDPAFVCYVEDAKIAEAKPIRIPLREENEFQPDPDELLELIT---KRTRMIVINYPNNPT 179 (391)
T ss_pred HHHHH--HHHhcCCCCEEEEcCCCCcccHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhcc---cccEEEEEeCCCCCC
Confidence 99987 3445679999999999999999999999999999999655567899999999887 467788899999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecCC
Q 012238 243 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 322 (467)
Q Consensus 243 G~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~ 322 (467)
|.+++.+++++|+++|++++++||+||+|.++.+++. ...+...+ ..+++++++||||.||++|+|+||++ .+
T Consensus 180 G~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~--~~~~~~~~--~~~~~i~~~s~SK~~~~~GlRiG~~~---~~ 252 (391)
T PRK08361 180 GATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGA--KHYPMIKY--APDNTILANSFSKTFAMTGWRLGFVI---AP 252 (391)
T ss_pred CcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCC--CCCCHhhc--CCCCEEEEecCchhcCCcHhhhhhhc---cC
Confidence 9999999999999999999999999999999976431 11122111 23589999999999999999999996 67
Q ss_pred HHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC
Q 012238 323 SDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSG 402 (467)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~~ 402 (467)
+++++. +.........+++.+.|.++..+|.++.. .+++++.+++++++++.+.+.|+ +++
T Consensus 253 ~~~~~~------------~~~~~~~~~~~~~~~~q~~~~~~l~~~~~----~~~~~~~~~~~~~~~~~~~~~L~-~~~-- 313 (391)
T PRK08361 253 EQVIKD------------MIKLHAYIIGNVASFVQIAGIEALRSKES----WKAVEEMRKEYNERRKLVLKRLK-EMP-- 313 (391)
T ss_pred HHHHHH------------HHHHHhhhccCCChHHHHHHHHHhcCCcc----cHHHHHHHHHHHHHHHHHHHHHH-hCC--
Confidence 777776 54444434456788889999889987543 23577899999999999999998 763
Q ss_pred CCcccccCCcceEEecCC-----C-HHHHHHHHHcccEEEeCCC----------eEEeccCChhhHHHHHHHHHHHHHhc
Q 012238 403 KDWSFILRQIGMFSFTGL-----N-KAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 403 ~~~~~~~~~~g~f~~~~l-----~-~~~~~~ll~~~gI~v~~gg----------Ris~~~~~~~~i~~~~~~l~~~l~~~ 466 (467)
+ +.+..|++|+|+|+.+ + .++.+.+++++||.+.||. ||+++. ++++++.++++|+++++++
T Consensus 314 ~-~~~~~p~g~~~~~~~l~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~~~l~~al~~l~~~l~~~ 391 (391)
T PRK08361 314 H-IKVFEPKGAFYVFANIDETGMSSEDFAEWLLEKARVVVIPGTAFGKAGEGYIRISYAT-SKEKLIEAMERMEKALEEL 391 (391)
T ss_pred C-CeecCCCEEEEEEEECCCCCCCHHHHHHHHHHhCCEEEcCchhhCCCCCCEEEEEecC-CHHHHHHHHHHHHHHHhcC
Confidence 1 6778899999999744 2 3456677777899999871 999997 7889999999999988753
No 52
>PRK08175 aminotransferase; Validated
Probab=100.00 E-value=6.3e-45 Score=366.81 Aligned_cols=345 Identities=14% Similarity=0.160 Sum_probs=274.9
Q ss_pred CCCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccC-ceeeeecCC
Q 012238 81 TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQ-RVATVQGLS 159 (467)
Q Consensus 81 ~~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~-~i~~~~t~g 159 (467)
.++++++|+.|.| ..+. ++.+.+++.+.+.......|.+..|.++||+++++++...+|..++++ +|++ |+|
T Consensus 27 ~~~~~i~l~~g~p----~~~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~--t~G 99 (395)
T PRK08175 27 RGEDIIDFSMGNP----DGPT-PPHIVEKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVDIDPESEAIV--TIG 99 (395)
T ss_pred cCCCeEEcCCCCC----CCCC-CHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEE--ccC
Confidence 3468999999987 3333 555666666655444457899999999999999999987778878887 7999 999
Q ss_pred chhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCC
Q 012238 160 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAH 239 (467)
Q Consensus 160 gt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~ 239 (467)
+++++.++ +...+.|||+|++++|+|+.+...++..|++++.++++++. .+++.+++.++...++++++++++||
T Consensus 100 ~~~~l~~~--~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~---~~~~~l~~~l~~~~~~~~~v~i~~p~ 174 (395)
T PRK08175 100 SKEGLAHL--MLATLDHGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEGV---DFFNELERAIRESYPKPKMMILGFPS 174 (395)
T ss_pred cHHHHHHH--HHHhCCCCCEEEEcCCCCcchHHHHHHcCCeEEEEecccCC---CcHHHHHHHHhhccCCceEEEEeCCC
Confidence 99999987 44457799999999999999999999999999999985332 34788888887543467888999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEe
Q 012238 240 NPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVV 319 (467)
Q Consensus 240 NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v 319 (467)
||||.+++.+++++|+++|++||++||+||+|.++.+++. ...++..+....+.+++++||||.||+||+|+||++
T Consensus 175 NPtG~~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~--~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~~-- 250 (395)
T PRK08175 175 NPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGW--KAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMV-- 250 (395)
T ss_pred CCCCCCCCHHHHHHHHHHHHHcCcEEEEecchHhhccCCC--CCcchhcCCCcccCEEEEeeccccccCcchhheeee--
Confidence 9999999999999999999999999999999999887531 112222221223578899999999999999999995
Q ss_pred cCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 012238 320 CSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD 399 (467)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~ 399 (467)
+++++++. +.+.......+++...|.++..+|.+. .++++..++.++++++.+.+.|+ ..
T Consensus 251 -~~~~l~~~------------~~~~~~~~~~~~~~~~q~~~~~~l~~~------~~~~~~~~~~~~~~~~~~~~~L~-~~ 310 (395)
T PRK08175 251 -GNPELVSA------------LARIKSYHDYGTFTPLQVAAIAALEGD------QQCVRDIAEQYKRRRDVLVKGLH-EA 310 (395)
T ss_pred -CCHHHHHH------------HHHHHhhcccCCCcHHHHHHHHHHhCc------HHHHHHHHHHHHHHHHHHHHHHH-Hc
Confidence 78888887 655554444456666788888777653 34577889999999999999999 77
Q ss_pred CCCCCcccccCCcceEEecCCC--------HHHHHHHHHcccEEEeCC---C-------eEEeccCChhhHHHHHHHHHH
Q 012238 400 KSGKDWSFILRQIGMFSFTGLN--------KAQSDNMTNKWHVYMTKD---G-------RISLAGLSLAKCEYLADAIID 461 (467)
Q Consensus 400 g~~~~~~~~~~~~g~f~~~~l~--------~~~~~~ll~~~gI~v~~g---g-------Ris~~~~~~~~i~~~~~~l~~ 461 (467)
+ +.+..+.+|+|+|+.+. .++++++++++||.+.|| | ||+++. +++.+++++++|.+
T Consensus 311 ~----~~~~~p~~g~~i~i~l~~~~~~~~~~~~~~~l~~~~gv~v~p~~~f~~~~~~~lRis~~~-~~~~~~~al~~l~~ 385 (395)
T PRK08175 311 G----WMVEMPKASMYVWAKIPEPYAAMGSLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFALIE-NRDRIRQAIRGIKA 385 (395)
T ss_pred C----CcccCCCEEEEEEEECCcccCCCCHHHHHHHHHHhCCEEEeCchhhCcCCCCeEEEEeCC-CHHHHHHHHHHHHH
Confidence 6 56777889999998652 345667787789999997 1 999985 78999999999999
Q ss_pred HHHhc
Q 012238 462 SYHNV 466 (467)
Q Consensus 462 ~l~~~ 466 (467)
++++.
T Consensus 386 ~l~~~ 390 (395)
T PRK08175 386 MFRAD 390 (395)
T ss_pred HHHhc
Confidence 98753
No 53
>PRK08637 hypothetical protein; Provisional
Probab=100.00 E-value=1.6e-44 Score=362.82 Aligned_cols=361 Identities=20% Similarity=0.256 Sum_probs=275.7
Q ss_pred CcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccc---cCceeeeecCCc
Q 012238 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLK---EQRVATVQGLSG 160 (467)
Q Consensus 84 ~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~---~~~i~~~~t~gg 160 (467)
+++|.++|.+.++ +.|++.+.++++..+... .....|.+..|.++||+++++++...++ .+. .++|++ |+|+
T Consensus 4 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~Y~~~~G~~~lr~~ia~~~~~~~~-~~~~~~~~~I~i--t~G~ 78 (388)
T PRK08637 4 TKYNATIGMATEK-GGPMYLSSLQDLLNDLTP-DEIFPYAPPQGIPELRDLWQEKMLRENP-SLSGKKMSLPIV--TNAL 78 (388)
T ss_pred cceecceeeEecC-CCcchHHHHHHHHHhhcc-ccccCCCCCCCCHHHHHHHHHHHhccCc-cccccccceeeE--ccch
Confidence 6899999999554 445557777777666432 3358899999999999999999876543 222 257888 9999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHh-hCCCCeEEeeeecCCCCCCChhhHHHHHHc-CCCCcEEEEeCCC
Q 012238 161 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-DARVPWSEYRYYDPKTVGLDFEGMIADIKA-APGGSFILLHGCA 238 (467)
Q Consensus 161 t~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~-~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~-~~~~~~~i~i~~p 238 (467)
++++.++ +...+.|||+|++++|+|+.|...+. ..|++++.+|+.+ +++++|++.+++.++. .++.+.++++++|
T Consensus 79 ~~al~~~--~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~g~~vv~v~~~~-~~~~~d~~~l~~~~~~~~~~~~~~~~~~~P 155 (388)
T PRK08637 79 THGLSLV--ADLFVDQGDTVLLPDHNWGNYKLTFNTRRGAEIVTYPIFD-EDGGFDTDALKEALQAAYNKGKVIVILNFP 155 (388)
T ss_pred HHHHHHH--HHHhcCCCCEEEEcCCCCccHHHHHHHhcCCEEEEecccC-CCCcCCHHHHHHHHHhhccCCCEEEEEeCC
Confidence 9999997 33346799999999999999998764 6899999999842 3457999999998862 1245678889999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHh-----cCCeeEEeccCCCCCCCCCCCChhHH-HHHHhcCCeE--EEEecCccCcccCC
Q 012238 239 HNPTGIDPTPEQWEKIADVIQE-----KNHIPFFDVAYQGFASGSLDNDASSV-RLFATRGMEL--LVAQSYSKNLGLYA 310 (467)
Q Consensus 239 ~NPTG~~~~~~~l~~l~~~~~~-----~~~~li~Deay~~~~~~~~~~~~~~~-~~~~~~~~~~--i~~~S~SK~~~~~G 310 (467)
|||||.+++.+++++|+++|++ |+++||+||+|.++.+++. ...++ ..+.+..+++ ++++||||.+++||
T Consensus 156 ~NPTG~~~s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~~l~~~~~--~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pG 233 (388)
T PRK08637 156 NNPTGYTPTEKEATAIVEAIKELADAGTKVVAVVDDAYFGLFYEDS--YKESLFAALANLHSNILAVKLDGATKEEFVWG 233 (388)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEecccchhcccCCc--cchhhHHHhhcccccceEEEeccccccCCCcc
Confidence 9999999999999999999875 8999999999999987642 11121 2233344564 45579999999999
Q ss_pred CccceEEEec---CCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHH
Q 012238 311 ERIGAMNVVC---SSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNV 387 (467)
Q Consensus 311 ~RiG~~~~v~---~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~ 387 (467)
+|+||+++.. +++++++. +...+.........+++.+.|.++..+|+++.+ .+++++.+..++++
T Consensus 234 lRlG~~~~~~~~~~~~~l~~~--------~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~----~~~~~~~~~~~~~r 301 (388)
T PRK08637 234 FRVGFITFGTKAGSSQTVKEA--------LEKKVKGLIRSNISNGPHPSQSAVLRALNSPEF----DKEKQEKFQILKER 301 (388)
T ss_pred cceEEEEEccccCCcHHHHHH--------HHHHHHHHhhcccCCCCcHHHHHHHHHhCCHHH----HHHHHHHHHHHHHH
Confidence 9999996211 34677776 333222222223457888999999999987644 55567788889999
Q ss_pred HHHHHHHhhhccCCCCCcccccCCcceEEecCCC----HHHHHHHHHcccEEEeCCC----eEEeccCChhhHHHHHHHH
Q 012238 388 RQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLN----KAQSDNMTNKWHVYMTKDG----RISLAGLSLAKCEYLADAI 459 (467)
Q Consensus 388 r~~l~~~l~~~~g~~~~~~~~~~~~g~f~~~~l~----~~~~~~ll~~~gI~v~~gg----Ris~~~~~~~~i~~~~~~l 459 (467)
++.+.+.|+ ..+.+..|.+.++++|+|+|+.+. .++++++++++||.+.+.+ ||+++..++++++.++++|
T Consensus 302 ~~~~~~~l~-~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~l~~~l~~~~gv~~~~~~~~~iRi~~~~~~~~~i~~~~~~l 380 (388)
T PRK08637 302 YEKTKEVLY-DGKYDDAWQAYPFNSGYFMCLKLKGVDAEELRVHLLEKYGIGTIALNETDLRIAFSCVEEEDIPELFDSI 380 (388)
T ss_pred HHHHHHHHH-hhCCCCCcccccccceEEEEecCChHHHHHHHHHHhhhcceEEEeccCCceEEEeecCCHHHHHHHHHHH
Confidence 999999997 654333478888999999998764 3456777777899887643 9999988899999999999
Q ss_pred HHHHHhcC
Q 012238 460 IDSYHNVS 467 (467)
Q Consensus 460 ~~~l~~~~ 467 (467)
.+++++++
T Consensus 381 ~~~~~~~~ 388 (388)
T PRK08637 381 YKAIKDLR 388 (388)
T ss_pred HHHHHhcC
Confidence 99998763
No 54
>PRK07777 aminotransferase; Validated
Probab=100.00 E-value=1.2e-44 Score=364.12 Aligned_cols=353 Identities=14% Similarity=0.120 Sum_probs=278.5
Q ss_pred CCCcccchHHHhhcCCCCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCc
Q 012238 66 PPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNS 145 (467)
Q Consensus 66 ~~~~i~~~~~~~~~~~~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~ 145 (467)
+...+.++..... .+++|||++|.| ..+. ++.+.+++.+.+.... ..|.+..|.++||+++++++...+|.
T Consensus 10 ~~~~~~~~~~~~~---~~~~i~l~~g~p----~~~~-~~~~~~~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~~~~~~g~ 80 (387)
T PRK07777 10 GTTIFAEMSALAV---RTGAVNLGQGFP----DEDG-PPEMLEAAQEAIAGGV-NQYPPGPGIPELRAAIAAQRRRRYGL 80 (387)
T ss_pred CccHHHHHHHHHh---hCCeEEccCCCC----CCCC-CHHHHHHHHHHHhcCC-CCCCCCCCCHHHHHHHHHHHHHHhCC
Confidence 4444444444443 247899999998 3333 4456777777665443 67988899999999999998777777
Q ss_pred ccccC-ceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecC-CCCCCChhhHHHHH
Q 012238 146 VLKEQ-RVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDP-KTVGLDFEGMIADI 223 (467)
Q Consensus 146 ~~~~~-~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~-~~~~~d~~~l~~~l 223 (467)
.++++ +|++ |+|+++++.++ +...+.+||+|+++.|+|..|..+++..|++++.++++++ .++.+|++.+++.+
T Consensus 81 ~~~~~~~i~~--t~G~~~al~~~--~~~~~~~gd~vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~~ 156 (387)
T PRK07777 81 EYDPDTEVLV--TVGATEAIAAA--VLGLVEPGDEVLLIEPYYDSYAAVIAMAGAHRVPVPLVPDGRGFALDLDALRAAV 156 (387)
T ss_pred CCCCCCcEEE--eCCcHHHHHHH--HHHhcCCCCEEEEeCCCchhhHHHHHHCCCEEEEeecCCccCCCcCCHHHHHHhc
Confidence 77776 7998 99999999987 4455679999999999999999999999999999998654 36789999999988
Q ss_pred HcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCc
Q 012238 224 KAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYS 303 (467)
Q Consensus 224 ~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~S 303 (467)
. ++++++++++||||||.+++.+++++|+++|+++++++|+||+|.++.+++. ...++..+....+++++++|||
T Consensus 157 ~---~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~--~~~~~~~~~~~~~~~i~~~S~S 231 (387)
T PRK07777 157 T---PRTRALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGA--RHLPLATLPGMRERTVTISSAA 231 (387)
T ss_pred C---cccEEEEEcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCC--CcccHhhCCCCcCcEEEEeech
Confidence 6 4677888999999999999999999999999999999999999999987531 1222322222245899999999
Q ss_pred cCcccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHH
Q 012238 304 KNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGR 383 (467)
Q Consensus 304 K~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~ 383 (467)
|.||+||+|+||++ +++++++. +.........+.+...|.++..++.+. .++++..++.
T Consensus 232 K~~g~~GlRiG~~~---~~~~l~~~------------~~~~~~~~~~~~~~~~q~~~~~~l~~~------~~~~~~~~~~ 290 (387)
T PRK07777 232 KTFNVTGWKIGWAC---GPAPLIAA------------VRAAKQYLTYVGGAPFQPAVAHALDHE------DAWVAALRDS 290 (387)
T ss_pred hhccCcCceeEEEe---cCHHHHHH------------HHHHHhhcccCCCCHHHHHHHHHHhCC------cHHHHHHHHH
Confidence 99999999999995 77888777 554444333345666777777777653 2336678899
Q ss_pred HHHHHHHHHHHhhhccCCCCCcccccCCcceEEecCC------C-HHHHHHHHHcccEEEeCC-----------C--eEE
Q 012238 384 IKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL------N-KAQSDNMTNKWHVYMTKD-----------G--RIS 443 (467)
Q Consensus 384 ~~~~r~~l~~~l~~~~g~~~~~~~~~~~~g~f~~~~l------~-~~~~~~ll~~~gI~v~~g-----------g--Ris 443 (467)
++++++.+.+.|+ +.+ +++.+++++||+|+.+ + .++++++++++||.+.|| + ||+
T Consensus 291 ~~~~~~~l~~~L~-~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~~Ri~ 365 (387)
T PRK07777 291 LQAKRDRLAAGLA-EAG----FEVHDSAGTYFLCADPRPLGYDDGTEFCRALPERVGVAAIPMSVFYDPADAWNHLVRFA 365 (387)
T ss_pred HHHHHHHHHHHHH-hCC----CCccCCCcceEEEecccccCCCCHHHHHHHHHHhCCEEEeCchHhCCCCcCCCCeEEEE
Confidence 9999999999999 776 5778889999999753 2 456778877789999886 1 999
Q ss_pred eccCChhhHHHHHHHHHHHH
Q 012238 444 LAGLSLAKCEYLADAIIDSY 463 (467)
Q Consensus 444 ~~~~~~~~i~~~~~~l~~~l 463 (467)
|+. +++++++++++|.+..
T Consensus 366 ~~~-~~~~l~~~l~~l~~~~ 384 (387)
T PRK07777 366 FCK-RDDTLDEAIRRLRALR 384 (387)
T ss_pred ecC-CHHHHHHHHHHHHHHh
Confidence 998 7899999999998865
No 55
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.7e-44 Score=333.94 Aligned_cols=355 Identities=15% Similarity=0.119 Sum_probs=293.6
Q ss_pred CCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchh
Q 012238 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (467)
Q Consensus 83 ~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (467)
+.+|.|+.|+|.-..-++. .+...+|+.+.+..+...+|.|..|++..|+++|+++++.-...++++.|++ |.|.++
T Consensus 61 k~iipl~~GDPsv~~~~~t-s~~a~~Av~~al~Sgk~N~Yaps~G~~~AR~AVAeYl~~~l~~kl~a~DV~l--tsGC~q 137 (447)
T KOG0259|consen 61 KPILPLGHGDPSVYPCFRT-SQEAEQAVVDALRSGKGNGYAPSVGILPARRAVAEYLNRDLPNKLTADDVVL--TSGCSQ 137 (447)
T ss_pred ceeccCCCCCCCccccccC-CHHHHHHHHHHHhcCCCCCcCCccccHHHHHHHHHHhhcCCCCccCcCceEE--eccchH
Confidence 3789999999844434443 7888899999888777799999999999999999999888777888999999 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCC
Q 012238 163 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT 242 (467)
Q Consensus 163 al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPT 242 (467)
|++++ +.++..||..|++|.|+|+.|...+...|.++.+|++.++++|.+|++.++..+. ++|++++++||+||+
T Consensus 138 AIe~~--i~~LA~p~aNILlPrPGfp~Y~~~a~~~~lEVR~ydlLPe~~weIDL~~veal~D---ENT~AivviNP~NPc 212 (447)
T KOG0259|consen 138 AIELA--ISSLANPGANILLPRPGFPLYDTRAIYSGLEVRYYDLLPEKDWEIDLDGVEALAD---ENTVAIVVINPNNPC 212 (447)
T ss_pred HHHHH--HHHhcCCCCceecCCCCCchHHHhhhhcCceeEeecccCcccceechHHHHHhhc---cCeeEEEEeCCCCCC
Confidence 99998 4555679999999999999999999999999999999989999999999999988 789999999999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecCC
Q 012238 243 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 322 (467)
Q Consensus 243 G~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~ 322 (467)
|.+|+.+.+++|++.|++++++||.||+|.++.|++. ...+...|. .--.++.++|.||-|-.||||+||++ ..+
T Consensus 213 GnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~--pfvpmg~fs-siVPVitlggisKrW~VPGWRlGWi~--~hD 287 (447)
T KOG0259|consen 213 GNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDK--PFVPMGKFS-SIVPVITLGGISKRWIVPGWRLGWIA--LHD 287 (447)
T ss_pred cccccHHHHHHHHHHHHHhCCeEEehhhcceeecCCC--Cccchhhcc-ccCceEeecccccccccCCceeeeEE--Eec
Confidence 9999999999999999999999999999999999862 333333332 22479999999999999999999997 344
Q ss_pred HHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC
Q 012238 323 SDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSG 402 (467)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~~ 402 (467)
+.-+-+ .+++...+++... ...+++++.|.++-.+|.... +++.......++.+.+..++.|+ +..
T Consensus 288 ~~gvf~-----~~~~~q~~~~~~~-~~~~p~TiiQ~AlP~IL~kTp-----~efF~k~~~~lk~na~l~y~~Lk-~IP-- 353 (447)
T KOG0259|consen 288 PRGVFR-----DTKVVQGIKNFLD-IIPGPATIIQGALPDILEKTP-----EEFFDKKLSFLKSNADLCYSRLK-DIP-- 353 (447)
T ss_pred cccccc-----chHHHHHHHHHHh-ccCCccHhHHHHhHHHHHhCh-----HHHHHHHHHHHHhhHHHHHHHHh-cCC--
Confidence 322111 0112122444333 256788999999998887431 34577888999999999999999 653
Q ss_pred CCcccccCCcceEEecCC----------CHHHHHHHHHcccEEEeCCC--------eEEeccCChhhHHHHHHHHHHHHH
Q 012238 403 KDWSFILRQIGMFSFTGL----------NKAQSDNMTNKWHVYMTKDG--------RISLAGLSLAKCEYLADAIIDSYH 464 (467)
Q Consensus 403 ~~~~~~~~~~g~f~~~~l----------~~~~~~~ll~~~gI~v~~gg--------Ris~~~~~~~~i~~~~~~l~~~l~ 464 (467)
+-.....|+|.+|+|+++ +.+|+.+|.++..+.+.||. ||+++. ..+.+++++++|++...
T Consensus 354 ~l~cp~kPeg~mylmv~l~~s~~~~~~dD~dFc~kL~~Eesv~~LPG~af~~~nw~Ri~i~~-~~~~leea~~Rik~Fc~ 432 (447)
T KOG0259|consen 354 CLTCPVKPEGCMYLMVKLNLSLFPDIEDDVDFCQKLAREESVICLPGQAFGLKNWLRIVITV-EEEMLEEAFSRIKEFCD 432 (447)
T ss_pred CcccCcCCCcceEEEeccchhhhccccccHHHHHHHhhhcceEEeccccccCCCeEEEEEcc-ChHHHHHHHHHHHHHHH
Confidence 322367899999999875 45789999999999999992 999998 78999999999999865
Q ss_pred h
Q 012238 465 N 465 (467)
Q Consensus 465 ~ 465 (467)
+
T Consensus 433 R 433 (447)
T KOG0259|consen 433 R 433 (447)
T ss_pred h
Confidence 4
No 56
>PRK07550 hypothetical protein; Provisional
Probab=100.00 E-value=1.6e-44 Score=363.01 Aligned_cols=356 Identities=17% Similarity=0.163 Sum_probs=280.7
Q ss_pred CCcccchHHHhhc--CCCCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCC
Q 012238 67 PDPILGVSEAFKA--DTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADN 144 (467)
Q Consensus 67 ~~~i~~~~~~~~~--~~~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~ 144 (467)
+..+.++.+.++. +.+.+.|+|+.|.| ..++ ++.+.+++.+.+.......|.+..|.++||+++++++...+|
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~i~l~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g 85 (386)
T PRK07550 11 PPPIPEVRAWLAGYDGADGPLIDLSQAVP----GYPP-PPELLRALAEAAADPAAHLYGPVEGLPELREAYAAHYSRLYG 85 (386)
T ss_pred ChHHHHHHHHHHHHhhcCCCeEEeCCCCC----CCCC-CHHHHHHHHHHHhCcCCcCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 3345455444431 24457999999998 3443 678888888876444446798899999999999999987778
Q ss_pred cccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHH
Q 012238 145 SVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIK 224 (467)
Q Consensus 145 ~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~ 224 (467)
..+++++|++ |+|+++++.++ +...+.+||+|++++|+|..+..+++..|++++.++++++.++.+|++.+++.++
T Consensus 86 ~~~~~~~i~~--t~G~~~al~~~--~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~~~ 161 (386)
T PRK07550 86 AAISPEQVHI--TSGCNQAFWAA--MVTLAGAGDEVILPLPWYFNHKMWLDMLGIRPVYLPCDEGPGLLPDPAAAEALIT 161 (386)
T ss_pred CCCCcceEEE--ecCcHHHHHHH--HHHhcCCCCEEEEcCCCCcchHHHHHhcCCEEEEEecCCCcCCCCCHHHHHHHhc
Confidence 8888999999 99999999987 3334679999999999999999999999999999999655567789999999887
Q ss_pred cCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCcc
Q 012238 225 AAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSK 304 (467)
Q Consensus 225 ~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK 304 (467)
.+++++++++||||||.+++.+++++|+++|+++|++||+||+|.++.++.. ...+.....+.++++++++||||
T Consensus 162 ---~~~~~v~~~~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~--~~~~~~~~~~~~~~~i~~~S~SK 236 (386)
T PRK07550 162 ---PRTRAIALVTPNNPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGGG--APHDLFADPDWDDTLVHLYSFSK 236 (386)
T ss_pred ---ccCcEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCC--CCcchhhCCCccccEEEEecchh
Confidence 4566777889999999999999999999999999999999999999875421 11111111123468999999999
Q ss_pred CcccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q 012238 305 NLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRI 384 (467)
Q Consensus 305 ~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~ 384 (467)
.+|++|+|+||++ .++++++. +.........+++.+.|.++..+|++. .+++++.++.+
T Consensus 237 ~~g~~G~RiG~i~---~~~~~~~~------------~~~~~~~~~~~~s~~~q~~~~~~l~~~------~~~~~~~~~~~ 295 (386)
T PRK07550 237 SYALTGHRVGAVV---ASPARIAE------------IEKFMDTVAICAPRIGQIAVAWGLPNL------ADWRAGNRAEI 295 (386)
T ss_pred hccCcccceEeee---cCHHHHHH------------HHHHHhhcccCCCcHHHHHHHHHhccH------HHHHHHHHHHH
Confidence 9999999999996 67777776 555555555677888999998888652 34466788899
Q ss_pred HHHHHHHHHHhhhccCCCCCcccccCCcceEEecCC-----C-HHHHHHHHHcccEEEeCCC----------eEEeccCC
Q 012238 385 KNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL-----N-KAQSDNMTNKWHVYMTKDG----------RISLAGLS 448 (467)
Q Consensus 385 ~~~r~~l~~~l~~~~g~~~~~~~~~~~~g~f~~~~l-----~-~~~~~~ll~~~gI~v~~gg----------Ris~~~~~ 448 (467)
+++++.+.+.|. ... .+.+ .+.+|+|+|+.+ + .++++++++++||.+.||. ||+++..+
T Consensus 296 ~~~~~~l~~~L~-~~~---~~~~-~~~g~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~ 370 (386)
T PRK07550 296 ARRRDAFRAVFA-RLP---GWEL-LASGAYFAYVRHPFPDRPSREVARRLAKEAGILCLPGTMFGPGQEGYLRLAFANAD 370 (386)
T ss_pred HHHHHHHHHHHH-hCC---Ccee-CCCceEEEEecCCCCCCCHHHHHHHHHHhcCEEEeCchhhCCCCCCEEEEEeecCC
Confidence 999999999998 652 1443 466899999744 2 3556777777899999961 99999778
Q ss_pred hhhHHHHHHHHHHH
Q 012238 449 LAKCEYLADAIIDS 462 (467)
Q Consensus 449 ~~~i~~~~~~l~~~ 462 (467)
+++++.++++|.+.
T Consensus 371 ~~~~~~~~~~l~~~ 384 (386)
T PRK07550 371 VAGIGELVERLRAF 384 (386)
T ss_pred HHHHHHHHHHHHhh
Confidence 89999999999764
No 57
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=100.00 E-value=4.8e-44 Score=361.17 Aligned_cols=365 Identities=16% Similarity=0.132 Sum_probs=283.8
Q ss_pred ccchHHHhhcC--CCCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCccc
Q 012238 70 ILGVSEAFKAD--TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVL 147 (467)
Q Consensus 70 i~~~~~~~~~~--~~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~ 147 (467)
|.++.+.+++. .+.++|+|+.|.|......++ ++.+.+++.+.+.......|.+..|.+++|+++++++....+..+
T Consensus 16 ~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~-~~~~~~~~~~~l~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~ 94 (403)
T TIGR01265 16 IRAIVDNLKVKPNPEKPIIPLSHGDPSVFGNLRT-DPEAEEAVKDALRSGKFNGYAPSVGALAAREAVAEYLSSDLPGKL 94 (403)
T ss_pred HHHHHHHHHHHHhcCCCeEEeCCCCCCccCCCCC-CHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHhhcCCCC
Confidence 44455555433 346899999999821112333 788999998887654446798999999999999999987667777
Q ss_pred ccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCC
Q 012238 148 KEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP 227 (467)
Q Consensus 148 ~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~ 227 (467)
++++|++ |+|+++++.++ +...+.+||+|++++|+|..|...++..|++++.+++.+++++++|++.+++.+.
T Consensus 95 ~~~~ii~--t~G~t~al~~~--~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~--- 167 (403)
T TIGR01265 95 TADDVVL--TSGCSQAIEIC--IEALANPGANILVPRPGFPLYDTRAAFSGLEVRLYDLLPEKDWEIDLDGLEALAD--- 167 (403)
T ss_pred CHHHEEE--ecChHHHHHHH--HHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEecCCcccCCccCHHHHHHHhC---
Confidence 8899999 99999999998 3334579999999999999999999999999999988545567899999999886
Q ss_pred CCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcc
Q 012238 228 GGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG 307 (467)
Q Consensus 228 ~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 307 (467)
++++++++++||||||.+++.+++++|+++|+++|++||+||+|.++.+++. ...++..+ ....++|+++||||.|+
T Consensus 168 ~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~--~~~~~~~~-~~~~~vi~~~S~SK~~~ 244 (403)
T TIGR01265 168 EKTVAIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDA--PFIPMASF-ASIVPVLSLGGISKRWV 244 (403)
T ss_pred cCccEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCC--Cccchhhh-ccCCcEEEEeecccccC
Confidence 4677888899999999999999999999999999999999999999987631 22233233 23347999999999999
Q ss_pred cCCCccceEEEecCCH-H-HHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHH
Q 012238 308 LYAERIGAMNVVCSSS-D-LAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIK 385 (467)
Q Consensus 308 ~~G~RiG~~~~v~~~~-~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~ 385 (467)
+||+|+||++ +.++ + +.+. +...++.... ...+++.+.|.++..+|.+.. ..++++.+++++
T Consensus 245 ~pGlRiG~~v--~~~~~~~~~~~--------~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~~~-----~~~~~~~~~~~~ 308 (403)
T TIGR01265 245 VPGWRLGWII--IHDPHGIFRDT--------VLQGLKNLLQ-RILGPATIVQGALPDILENTP-----QEFFDGKISVLK 308 (403)
T ss_pred CCcceEEEEE--EeCchhhhHHH--------HHHHHHHHhh-hhcCCChHHHHHHHHHHHhCh-----HHHHHHHHHHHH
Confidence 9999999996 3322 2 2221 2222444432 234678889999988886421 345778889999
Q ss_pred HHHHHHHHHhhhccCCCCCcccccCCcceEEecCCC----------HHHHHHHHHcccEEEeCCC--------eEEeccC
Q 012238 386 NVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLN----------KAQSDNMTNKWHVYMTKDG--------RISLAGL 447 (467)
Q Consensus 386 ~~r~~l~~~l~~~~g~~~~~~~~~~~~g~f~~~~l~----------~~~~~~ll~~~gI~v~~gg--------Ris~~~~ 447 (467)
++|+.+.+.|+ .++ + +.+..|.+|+|+|+.++ .++++++++++||.+.||. ||+|+.
T Consensus 309 ~~~~~l~~~L~-~~~--~-~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~iRis~~~- 383 (403)
T TIGR01265 309 SNAELCYEELK-DIP--G-LVCPKPEGAMYLMVKLELELFPEIKDDVDFCEKLVREESVICLPGSAFGLPNWVRITITV- 383 (403)
T ss_pred HHHHHHHHHHh-cCC--C-ceecCCCceeEEEEeccccccCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEecC-
Confidence 99999999998 762 1 56667899999998652 3456777777899999982 999997
Q ss_pred ChhhHHHHHHHHHHHHHhc
Q 012238 448 SLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 448 ~~~~i~~~~~~l~~~l~~~ 466 (467)
+++++++++++|.+++++.
T Consensus 384 ~~~~l~~~l~~l~~~~~~~ 402 (403)
T TIGR01265 384 PESMLEEACSRIKEFCERH 402 (403)
T ss_pred CHHHHHHHHHHHHHHHHhc
Confidence 7889999999999988753
No 58
>PLN02368 alanine transaminase
Probab=100.00 E-value=1.1e-44 Score=363.17 Aligned_cols=334 Identities=16% Similarity=0.154 Sum_probs=256.5
Q ss_pred ccchHHHhhcCCCCCcEEecCcccCCCC-----CC----------------C-----CchHHHHHHHHHHHh-cCCCCcC
Q 012238 70 ILGVSEAFKADTDEKKLNLGVGAYRTEE-----LQ----------------P-----YVLDVVKKAENLMLE-RGENKEY 122 (467)
Q Consensus 70 i~~~~~~~~~~~~~~~i~l~~G~~~d~~-----~~----------------p-----~~~~~v~~a~~~~~~-~~~~~~Y 122 (467)
+...++++++ .+.++|+|++|+| |.. ++ | .+++.+.++...... .+....|
T Consensus 26 ~~~~a~~~~~-~g~~vi~l~iG~P-d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~~~i~~a~~~l~~~~~~~~~Y 103 (407)
T PLN02368 26 LYLRASELQK-EGKKIIFTNVGNP-HALGQKPLTFPRQVVALCQAPFLLDDPNVGLLFPADAIARAKHYLSLTSGGLGAY 103 (407)
T ss_pred HHHHHHHHHH-HhhhhhcccCCCh-hHcCCCCchHHHHHHHHhcCchhcCCccccccCCHHHHHHHHHHHhcCCCCCCCC
Confidence 3334444433 3458999999998 210 01 1 136667777655332 2234689
Q ss_pred CCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHh-CCCCEEEEcCCCCcchHHHHhhCCCCe
Q 012238 123 LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY-FPGAKVLISSPTWGNHKNIFNDARVPW 201 (467)
Q Consensus 123 ~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~-~~gd~Vlv~~P~y~~~~~~~~~~G~~~ 201 (467)
++..|.++||+++|+++.+.+|..+++++|++ |+|+++++.++ +...+ .|||.|++++|+|+.|...++..|+++
T Consensus 104 ~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~i--t~Ga~~al~~~--~~~l~~~pGd~Vli~~P~Y~~y~~~~~~~g~~~ 179 (407)
T PLN02368 104 SDSRGLPGVRKEVAEFIERRDGYPSDPELIFL--TDGASKGVMQI--LNAVIRGEKDGVLVPVPQYPLYSATISLLGGTL 179 (407)
T ss_pred CCCCCCHHHHHHHHHHHHHhcCCCCChhhEEE--cccHHHHHHHH--HHHHcCCCCCEEEEeCCCCccHHHHHHHcCCEE
Confidence 99999999999999999887788888999999 99999999987 34445 589999999999999999999999999
Q ss_pred EEeeeecCCCCCCChhhHHHHHHcC---CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCC
Q 012238 202 SEYRYYDPKTVGLDFEGMIADIKAA---PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGS 278 (467)
Q Consensus 202 ~~v~~~~~~~~~~d~~~l~~~l~~~---~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~ 278 (467)
+.++++++++|++|++.+++.++.. ..++++++++|||||||.+++.+++++|+++|++||++||+||+|.++.|++
T Consensus 180 v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~DE~Y~~l~y~~ 259 (407)
T PLN02368 180 VPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGDEVYQQNIYQD 259 (407)
T ss_pred EEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccccccccCC
Confidence 9999976667899999999998731 1267889999999999999999999999999999999999999999999863
Q ss_pred CCCChhHHHHHH-h------cCCeEEEEecCccCc-ccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccC
Q 012238 279 LDNDASSVRLFA-T------RGMELLVAQSYSKNL-GLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYS 350 (467)
Q Consensus 279 ~~~~~~~~~~~~-~------~~~~~i~~~S~SK~~-~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 350 (467)
. ....++..+. + ..+++|+++||||.| ++||||+||++...+++++++. +.+.... ..
T Consensus 260 ~-~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~~li~~------------~~~~~~~-~~ 325 (407)
T PLN02368 260 E-RPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVEE------------IYKVASI-AL 325 (407)
T ss_pred C-CCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCHHHHHH------------HHHHhcc-cC
Confidence 1 1122332321 1 234899999999998 8999999999611157778777 5554332 44
Q ss_pred CCchHHHHHHHHHhCChh----hHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceEEecC--CCHHH
Q 012238 351 NPPVHGARIVANVVGNPA----LFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTG--LNKAQ 424 (467)
Q Consensus 351 ~~~~~~~~~~~~~L~~~~----~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~~~g~f~~~~--l~~~~ 424 (467)
+++.++|.++..+|++++ ..+.|.++++++++.|+++|+.+.+.|+ ++. ++.+..|+|+||+|++ +..+.
T Consensus 326 ~~~~~~Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~-~~~---g~~~~~P~Gafy~~~~i~lp~~~ 401 (407)
T PLN02368 326 SPNVSGQIFMGLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFN-SCK---NVVCNFTEGAMYSFPQIKLPPKA 401 (407)
T ss_pred CCCcHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCC---CeEeCCCCeeeEeccCCCCCHHH
Confidence 688899999999997542 1123445567789999999999999999 762 1678889999999975 45555
Q ss_pred HHH
Q 012238 425 SDN 427 (467)
Q Consensus 425 ~~~ 427 (467)
+++
T Consensus 402 ~~~ 404 (407)
T PLN02368 402 IEA 404 (407)
T ss_pred HHH
Confidence 543
No 59
>PRK08363 alanine aminotransferase; Validated
Probab=100.00 E-value=5.1e-44 Score=360.67 Aligned_cols=349 Identities=17% Similarity=0.165 Sum_probs=278.2
Q ss_pred CCCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCc
Q 012238 81 TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 160 (467)
Q Consensus 81 ~~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~gg 160 (467)
.+.++|+|+.|.|.. ..+++ ++.+.+++.+.+... ...|.+..|.++||+++++++...+|..+++++|++ |+|+
T Consensus 28 ~~~~~i~l~~g~p~~-~~~~p-~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~i--t~G~ 102 (398)
T PRK08363 28 KGIKVIRLNIGDPVK-FDFQP-PEHMKEAYCRAIKEG-HNYYGPSEGLPELREAIVKREKRKNGVDITPDDVRV--TAAV 102 (398)
T ss_pred cCCCeEEEeCCCCCc-CCCCC-CHHHHHHHHHHHHcC-CCCCCCCCCcHHHHHHHHHHHHHhcCCCCChhhEEE--eCCH
Confidence 345899999999821 12333 788889988877544 367988999999999999999887788888999999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCC
Q 012238 161 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN 240 (467)
Q Consensus 161 t~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~N 240 (467)
++++.++ +...+.+||+|++++|+|..|...++..|++++.++..+++++.+|++.+++.+. ++++++++++|||
T Consensus 103 ~~al~~~--~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~---~~~~~v~l~~p~N 177 (398)
T PRK08363 103 TEALQLI--FGALLDPGDEILIPGPSYPPYTGLVKFYGGVPVEYRTIEEEGWQPDIDDIRKKIT---EKTKAIAVINPNN 177 (398)
T ss_pred HHHHHHH--HHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeccccccCCcCCHHHHHhhCC---cceEEEEEECCCC
Confidence 9999998 4445779999999999999999999999999888843334567799999998886 4678888899999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEec
Q 012238 241 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC 320 (467)
Q Consensus 241 PTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~ 320 (467)
|||.+++.+++++|+++|+++|++||+||+|.++.+++ ...++..+ ....++++++||||.|++||+|+||++ +
T Consensus 178 PtG~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~---~~~~~~~~-~~~~~vi~~~SfSK~~~~~GlRiG~~~--~ 251 (398)
T PRK08363 178 PTGALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEG---KHVSPGSL-TKDVPVIVMNGLSKVYFATGWRLGYIY--F 251 (398)
T ss_pred CCCcCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCC---cccCHHHc-CcCCcEEEEecchhccCCccceEEEEE--E
Confidence 99999999999999999999999999999999987753 11222222 234579999999999999999999996 3
Q ss_pred -CCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 012238 321 -SSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD 399 (467)
Q Consensus 321 -~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~ 399 (467)
+++++++. +...+...... ..+++.+.|.++..+|.+. .+++++.+++++++++.+.+.|+ ++
T Consensus 252 ~~~~~~~~~--------l~~~~~~~~~~-~~~~s~~~q~~~~~~l~~~------~~~l~~~~~~~~~~~~~l~~~L~-~~ 315 (398)
T PRK08363 252 VDPEGKLAE--------VREAIDKLARI-RLCPNTPAQFAAIAGLTGP------MDYLEEYMKKLKERRDYIYKRLN-EI 315 (398)
T ss_pred eCcHHHHHH--------HHHHHHHHhcc-cccCChHHHHHHHHHHhCC------hHHHHHHHHHHHHHHHHHHHHHh-cC
Confidence 46677766 44444333222 2357778888888888642 23467788999999999999998 76
Q ss_pred CCCCCcccccCCcceEEecCC-------CHHHHHHHHHcccEEEeCCC----------eEEeccCChhhHHHHHHHHHHH
Q 012238 400 KSGKDWSFILRQIGMFSFTGL-------NKAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEYLADAIIDS 462 (467)
Q Consensus 400 g~~~~~~~~~~~~g~f~~~~l-------~~~~~~~ll~~~gI~v~~gg----------Ris~~~~~~~~i~~~~~~l~~~ 462 (467)
+ + +.+..|+||||+|+.+ +.+++.++++++||.+.||. |||++. +++++++++++|+++
T Consensus 316 ~--~-~~~~~p~g~~~~~~~l~~~~~~~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~~-~~~~l~~~l~~l~~~ 391 (398)
T PRK08363 316 P--G-ISTTKPQGAFYIFPRIEEGPWKDDKEFVLDVLHEAHVLFVHGSGFGEYGAGHFRLVFLP-PVEILEEAMDRFEEF 391 (398)
T ss_pred C--C-CEecCCCeEEEEEEEeccCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecC-CHHHHHHHHHHHHHH
Confidence 3 2 6777899999999633 24556777778899999972 999986 789999999999998
Q ss_pred HHh
Q 012238 463 YHN 465 (467)
Q Consensus 463 l~~ 465 (467)
+++
T Consensus 392 ~~~ 394 (398)
T PRK08363 392 MRE 394 (398)
T ss_pred HHH
Confidence 865
No 60
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=100.00 E-value=2.5e-44 Score=365.89 Aligned_cols=348 Identities=16% Similarity=0.189 Sum_probs=287.9
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhc--CC-CCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecC
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER--GE-NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGL 158 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~--~~-~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ 158 (467)
.+.+++|+.|.+ +...+| ...+.+++...+.. .. ...|.+..|.++||+++++++....|..+++++|++ |+
T Consensus 88 ~~~~i~f~~g~p-~~~~fp--~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~Iii--T~ 162 (459)
T COG1167 88 DPSVIDFAGGLP-DPSLFP--LEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPEQIVI--TS 162 (459)
T ss_pred CCceecCCCCCC-CcccCC--HHHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCcCeEEE--eC
Confidence 368999999987 332222 56777777776632 12 367888899999999999999877899999999999 99
Q ss_pred CchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCC
Q 012238 159 SGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCA 238 (467)
Q Consensus 159 ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p 238 (467)
|+++|+.++. ...+.|||+|++++|+|.....+++.+|++++.||++ ..|+|++.+++.++.. ....++++++.
T Consensus 163 G~q~al~l~~--~~l~~pGd~v~vE~PtY~~~~~~~~~~g~~~~~vp~d---~~G~~~e~le~~~~~~-~~k~~y~~P~~ 236 (459)
T COG1167 163 GAQQALDLLL--RLLLDPGDTVLVEDPTYPGALQALEALGARVIPVPVD---EDGIDPEALEEALAQW-KPKAVYVTPTF 236 (459)
T ss_pred CHHHHHHHHH--HHhCCCCCEEEEcCCCcHHHHHHHHHcCCcEEecCCC---CCCCCHHHHHHHHhhc-CCcEEEECCCC
Confidence 9999999973 3346699999999999999999999999999999995 3479999999999864 35578888999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEE
Q 012238 239 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNV 318 (467)
Q Consensus 239 ~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~ 318 (467)
|||||.+++.++.++|+++|++||++||+||+|.+|.++.. ...++.. .+..++||+++||||++. ||+|+||++
T Consensus 237 qNPtG~tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~--p~~~l~~-ld~~~rViy~gSFSK~l~-PglRlG~vv- 311 (459)
T COG1167 237 QNPTGVTMSLERRKALLALAEKYDVLIIEDDYYGELRYDGP--PPPPLKA-LDAPGRVIYLGSFSKTLA-PGLRLGYVV- 311 (459)
T ss_pred CCCCCCccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCC--CCCChHh-hCCCCCEEEEeeehhhcc-cccceeeee-
Confidence 99999999999999999999999999999999999998742 2222322 244679999999999997 999999996
Q ss_pred ecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 012238 319 VCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAK 398 (467)
Q Consensus 319 v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~ 398 (467)
+++++++. +..........++.+.|.+++..+.++.+ .++++.+++.|+++|+.+.+.|+ +
T Consensus 312 --~p~~~~~~------------~~~~k~~~~~~~s~~~Q~~la~~l~~G~~----~~hl~~lR~~y~~rr~~l~~~L~-~ 372 (459)
T COG1167 312 --APPELIEK------------LLRLKQAADLGPSSLSQAALAAFLLSGHY----DRHLRRLRREYARRRDALLEALA-E 372 (459)
T ss_pred --CCHHHHHH------------HHHHHHHhcCCCChHHHHHHHHHHHcCCH----HHHHHHHHHHHHHHHHHHHHHHH-H
Confidence 88888888 66655666778899999999988886544 67799999999999999999999 6
Q ss_pred cCCCCCcccccCCcceEEecCC----CH-HHHHHHHHcccEEEeC-CC------------eEEeccCChhhHHHHHHHHH
Q 012238 399 DKSGKDWSFILRQIGMFSFTGL----NK-AQSDNMTNKWHVYMTK-DG------------RISLAGLSLAKCEYLADAII 460 (467)
Q Consensus 399 ~g~~~~~~~~~~~~g~f~~~~l----~~-~~~~~ll~~~gI~v~~-gg------------Ris~~~~~~~~i~~~~~~l~ 460 (467)
.. ++...+..|.+|+|+|+.+ +. ++++.+++ +||.+.+ |- ||+|+..+++++++++++|.
T Consensus 373 ~~-~~~~~~~~p~gG~flwl~l~~~~~~~~l~~~a~~-~gv~i~~~g~~f~~~~~~~~~~Rl~~s~~~~e~i~~gi~~l~ 450 (459)
T COG1167 373 YL-PELATWTRPEGGLFLWLELPEGIDARELLAAALE-KGVVVTPLGSAFSADGDPRNGLRLSFSSPSEEEIEEGIKRLA 450 (459)
T ss_pred hC-CCCeeeecCCceEEEEEEcCCCCCHHHHHHHHHH-CCCEEEcCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHH
Confidence 63 2346788999999999965 33 45666665 5998888 41 99999988999999999999
Q ss_pred HHHHhc
Q 012238 461 DSYHNV 466 (467)
Q Consensus 461 ~~l~~~ 466 (467)
+++++.
T Consensus 451 ~~~~~~ 456 (459)
T COG1167 451 ALLREA 456 (459)
T ss_pred HHHHHH
Confidence 998753
No 61
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=100.00 E-value=3.6e-44 Score=355.63 Aligned_cols=330 Identities=15% Similarity=0.137 Sum_probs=267.7
Q ss_pred CcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccC-ceeeeecCCchh
Q 012238 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQ-RVATVQGLSGTG 162 (467)
Q Consensus 84 ~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~-~i~~~~t~ggt~ 162 (467)
++++|+.|.| ..++ ++.+.+++.+.... ...|.+..|.++||+++++++...+|..++++ +|++ |+|+++
T Consensus 1 ~~~~~~~g~p----~~~~-~~~~~~~~~~~~~~--~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~Iii--t~Gs~~ 71 (350)
T TIGR03537 1 RLFDFGTGDP----KEPT-PPFIRKALIDAVPE--VSQYPSALGTKALREAISGWFERRFGVKLDPDAQVLP--SAGSKE 71 (350)
T ss_pred CeEeccCCCC----CCCC-CHHHHHHHHHHHhc--cCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEE--cCChHH
Confidence 3689999988 4444 77888888887542 47798889999999999999987778888887 8999 999999
Q ss_pred HHHHHHHHHHHhCCC---CEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCC
Q 012238 163 SLRLAAALIERYFPG---AKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAH 239 (467)
Q Consensus 163 al~l~~~~l~~~~~g---d~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~ 239 (467)
+++++ +...+.+| |+|+++.|+|..|...++..|++++.+++++++++.+|++.+++++. ++++++++++||
T Consensus 72 ai~~~--~~~~~~~g~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~---~~~~~i~i~~p~ 146 (350)
T TIGR03537 72 AIFHF--PLVFIDPEEDRRRVIFGTPGYPVYERGALFAGGEPTAVKLKKEDGFLLRLEKVEKSIL---EETKIVWINYPH 146 (350)
T ss_pred HHHHH--HHHHcCCCCCCceEEEcCCCCcchHHHHHhcCCEEEEcccCcccCCccCHHHHHHhhh---hccEEEEEeCCC
Confidence 99997 44456676 69999999999999999999999999998645567799999999887 467889999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEe
Q 012238 240 NPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVV 319 (467)
Q Consensus 240 NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v 319 (467)
||||.+++.+++++|+++|+++|++||+||+|.++.++.. ..++..+ ..+++++++||||.+|++|+|+||++
T Consensus 147 NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~---~~~~~~~--~~~~~i~~~s~SK~~g~~GlRiG~~~-- 219 (350)
T TIGR03537 147 NPTGATAPRSYLKETIAMCREHGIILCSDECYTEIYFGEP---PHSALEV--GIENVLAFHSLSKRSGMTGYRSGFVA-- 219 (350)
T ss_pred CCcCcccCHHHHHHHHHHHHHcCcEEEEeccccccccCCC---CCchhhc--CcCCEEEEeecccccCCccccceeee--
Confidence 9999999999999999999999999999999998876531 1112111 24689999999999999999999995
Q ss_pred cCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 012238 320 CSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD 399 (467)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~ 399 (467)
+++++++. +.........+.+.+.|.++...+.+. +++++.+++++++++.+.+.|+ ..
T Consensus 220 -~~~~~~~~------------~~~~~~~~~~~~~~~~q~~~~~~l~~~-------~~~~~~r~~l~~~~~~~~~~l~-~~ 278 (350)
T TIGR03537 220 -GDEKLISF------------LRKLRANFGVASPDFVQAAAKAAWSDD-------NHVLERRKIFKRKRDLFIEFFN-KV 278 (350)
T ss_pred -cCHHHHHH------------HHHHHHhhccCCCHHHHHHHHHHhCCc-------HHHHHHHHHHHHHHHHHHHHHH-HC
Confidence 78887777 555444444566667777776776643 2356778899999999999998 77
Q ss_pred CCCCCcccccCCcceEEecCC----C-HHHHHHHHHcccEEEeCC--------C--eEEeccCChhhHHHHHHHHHH
Q 012238 400 KSGKDWSFILRQIGMFSFTGL----N-KAQSDNMTNKWHVYMTKD--------G--RISLAGLSLAKCEYLADAIID 461 (467)
Q Consensus 400 g~~~~~~~~~~~~g~f~~~~l----~-~~~~~~ll~~~gI~v~~g--------g--Ris~~~~~~~~i~~~~~~l~~ 461 (467)
| +++.++++|+|+|+.+ + .++++.+++ +||.+.|| + ||+++. +++++++++++|++
T Consensus 279 g----~~~~~~~g~~~~~~~~~~~~~~~~l~~~L~~-~gv~v~~g~~f~~~~~~~~Ri~~~~-~~~~~~~~l~~~~~ 349 (350)
T TIGR03537 279 G----LEYLYPDATFYLWVKVPSGIDAKDYALRLLE-NGIVVAPGENFGSGEEGYVRVALVP-TLEECEEALRLWER 349 (350)
T ss_pred C----CcccCCCeEEEEEEECCCCCCHHHHHHHHHH-CCEEEcCchhhCCCCCCEEEEEecC-CHHHHHHHHHHHhc
Confidence 6 5777889999999854 2 345666665 69999986 1 999985 78999999988865
No 62
>PRK09265 aminotransferase AlaT; Validated
Probab=100.00 E-value=8.4e-44 Score=359.68 Aligned_cols=353 Identities=16% Similarity=0.128 Sum_probs=270.5
Q ss_pred CCCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCc
Q 012238 81 TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 160 (467)
Q Consensus 81 ~~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~gg 160 (467)
.++++|+|+.|.| +.-+.++ ++.+.+++.+.+.. ...|++..|.++||+++|+++.......+++++|++ |+|+
T Consensus 31 ~~~~~i~l~~g~p-~~~~~~~-~~~i~~~~~~~~~~--~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~~--t~G~ 104 (404)
T PRK09265 31 EGHKILKLNIGNP-APFGFEA-PDEILRDVIRNLPT--AQGYSDSKGLFSARKAIMQYYQQKGIPDVDVDDIYI--GNGV 104 (404)
T ss_pred cCCCeEEecCCCC-CcCCCCC-CHHHHHHHHHHhhc--CCCCCCCCCcHHHHHHHHHHHhccCCCCCCcccEEE--eCCh
Confidence 4468999999987 2212333 66777777665543 367999999999999999998765444678999999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCC
Q 012238 161 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN 240 (467)
Q Consensus 161 t~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~N 240 (467)
++++.++ +...+.+||+|++++|+|..|...++..|++++.++++.+.++.+|++.+++.+. .+++++++++|||
T Consensus 105 ~~~l~~~--~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~---~~~~~v~l~~P~N 179 (404)
T PRK09265 105 SELIVMA--MQALLNNGDEVLVPAPDYPLWTAAVSLSGGKPVHYLCDEEAGWFPDLDDIRSKIT---PRTKAIVIINPNN 179 (404)
T ss_pred HHHHHHH--HHHhCCCCCEEEEeCCCCcChHHHHHHcCCEEEEEecccccCCCCCHHHHHHhcc---ccceEEEEECCCC
Confidence 9999987 3445679999999999999999999999999999887544567899999999886 5678888999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEec
Q 012238 241 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC 320 (467)
Q Consensus 241 PTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~ 320 (467)
|||.+++.+++++|+++|+++|++||+||+|.++.++.. ...++..+ ....++++++||||.|++||+|+||++. .
T Consensus 180 PtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~--~~~~~~~~-~~~~~vi~~~S~SK~~~~pGlRiG~~v~-~ 255 (404)
T PRK09265 180 PTGAVYSKELLEEIVEIARQHNLIIFADEIYDKILYDGA--VHISIASL-APDLLCVTFNGLSKAYRVAGFRVGWMVL-S 255 (404)
T ss_pred CCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCCC--CcCCHHHc-CCCceEEEEecchhhccCcccceEEEEE-e
Confidence 999999999999999999999999999999999987531 12222222 2234789999999999999999999961 2
Q ss_pred CCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 012238 321 SSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK 400 (467)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g 400 (467)
++++..+. +...+... .....+++.++|.++..+|.+.+.. .+ +.+.+++++++|+.+.+.|+ +++
T Consensus 256 ~~~~~~~~--------~~~~~~~~-~~~~~~~~~~~q~~~~~~l~~~~~~---~~-~~~~~~~~~~~r~~~~~~L~-~~~ 321 (404)
T PRK09265 256 GPKKHAKG--------YIEGLDML-ASMRLCANVPAQHAIQTALGGYQSI---NE-LILPGGRLYEQRDRAWELLN-AIP 321 (404)
T ss_pred CchHHHHH--------HHHHHHHH-hccccCCCcHHHHHHHHHhcCchhH---HH-HHHHHHHHHHHHHHHHHHHh-cCC
Confidence 45544433 33224332 2234467788899999888754321 12 22223567778999999998 762
Q ss_pred CCCCcccccCCcceEEecCCC---------HHHHHHHHHcccEEEeCCC----------eEEeccCChhhHHHHHHHHHH
Q 012238 401 SGKDWSFILRQIGMFSFTGLN---------KAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEYLADAIID 461 (467)
Q Consensus 401 ~~~~~~~~~~~~g~f~~~~l~---------~~~~~~ll~~~gI~v~~gg----------Ris~~~~~~~~i~~~~~~l~~ 461 (467)
+ +.+..|++|+|+|+.++ .+++.++++++||.+.||. ||+++. ++++++.++++|.+
T Consensus 322 --~-~~~~~p~~g~~l~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~pg~~F~~~~~~~~Ri~~~~-~~e~l~~~l~rl~~ 397 (404)
T PRK09265 322 --G-VSCVKPKGALYAFPKLDPKVYPIHDDEQFVLDLLLQEKVLLVQGTGFNWPEPDHFRIVTLP-RVDDLEEAIGRIGR 397 (404)
T ss_pred --C-CcccCCCcceEEEEEecccccCCCCHHHHHHHHHHhCCEEEECchhhCCCCCCeEEEEeCC-CHHHHHHHHHHHHH
Confidence 2 67788999999997542 3457777778899999871 999975 88999999999999
Q ss_pred HHHhc
Q 012238 462 SYHNV 466 (467)
Q Consensus 462 ~l~~~ 466 (467)
+++..
T Consensus 398 ~l~~~ 402 (404)
T PRK09265 398 FLSGY 402 (404)
T ss_pred HHHHh
Confidence 88753
No 63
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=100.00 E-value=1.4e-44 Score=368.34 Aligned_cols=330 Identities=17% Similarity=0.139 Sum_probs=265.6
Q ss_pred CCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchh
Q 012238 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (467)
Q Consensus 83 ~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (467)
..+++|+.|.| ..++ +|.+.+++.+.... ...|++..|.++||+++++++....+ .+++|++ |+|+++
T Consensus 85 ~~~i~L~~g~p----~~~~-~p~~~~~~~~~~~~--~~~Y~~~~g~~~lr~~ia~~~~~~~~---~~~~Iii--t~G~~~ 152 (431)
T PRK15481 85 TPLHDLAGGNP----DPQR-LPDLSRYFARLSRT--PRLYGDAPVSPELHAWAARWLRDDCP---VAFEIDL--TSGAID 152 (431)
T ss_pred chhhhhhcCCC----ChhH-hHHHHHHHHHhhhh--hhhcCCcCCCHHHHHHHHHHHhhccC---CcCeEEE--ecCcHH
Confidence 36899999987 3333 45577777765432 35798899999999999999764322 2468999 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeC-CCCCC
Q 012238 163 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHG-CAHNP 241 (467)
Q Consensus 163 al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~-~p~NP 241 (467)
++.++ +...+.|||.|++++|+|+.|...++..|++++.+|+++ .++|++.+++.++. ++++++++ |||||
T Consensus 153 al~~~--~~~l~~pgd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~---~g~~~~~l~~~~~~---~~k~i~~~p~p~NP 224 (431)
T PRK15481 153 AIERL--LCAHLLPGDSVAVEDPCFLSSINMLRYAGFSASPVSVDA---EGMQPEKLERALAQ---GARAVILTPRAHNP 224 (431)
T ss_pred HHHHH--HHHhCCCCCEEEEeCCCcHHHHHHHHHcCCeEEeeccCC---CCCCHHHHHHHHhc---CCCEEEECCCCCCC
Confidence 99997 444577999999999999999999999999999999842 25899999998873 45555555 99999
Q ss_pred CCCCCCHHHHHHHHHHHHhc-CCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEec
Q 012238 242 TGIDPTPEQWEKIADVIQEK-NHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC 320 (467)
Q Consensus 242 TG~~~~~~~l~~l~~~~~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~ 320 (467)
||.+++.+++++|+++|+++ +++||+||+|.+|.++.. ...+ ....+++++++||||+|+ ||+|+||++
T Consensus 225 TG~~~s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~---~~~~---~~~~~~vi~~~SfSK~~~-~GlRiG~~i--- 294 (431)
T PRK15481 225 TGCSLSARRAAALRNLLARYPQVLVIIDDHFALLSSSPY---HSVI---PQTTQRWALIRSVSKALG-PDLRLAFVA--- 294 (431)
T ss_pred CCccCCHHHHHHHHHHHHhcCCceEEecCchhhhccCCC---CCCC---cCCCCCEEEEeeeccccC-CCceeEEEe---
Confidence 99999999999999999999 999999999999976421 1111 113468999999999999 999999996
Q ss_pred CCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 012238 321 SSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK 400 (467)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g 400 (467)
+++++++. +.........+++.+.|.++..+|+++.+ .+++++.++.++++|+.+.+.|+ +.+
T Consensus 295 ~~~~~~~~------------~~~~~~~~~~~~s~~~q~a~~~~l~~~~~----~~~l~~~~~~~~~~r~~~~~~L~-~~~ 357 (431)
T PRK15481 295 SDSATSAR------------LRLRLNSGTQWVSHLLQDLVYACLTDPEY----QARLAQARLFYAQRRQKLARALQ-QYG 357 (431)
T ss_pred CCHHHHHH------------HHHHHhccccCCCHHHHHHHHHHHhCccH----HHHHHHHHHHHHHHHHHHHHHHH-HcC
Confidence 78888887 54443333446788999999999988654 45588899999999999999999 776
Q ss_pred CCCCcccccCCcceEEecCCC---HHHHHHHHHcccEEEeCC---------C--eEEeccCChhhHHHHHHHHHHHHH
Q 012238 401 SGKDWSFILRQIGMFSFTGLN---KAQSDNMTNKWHVYMTKD---------G--RISLAGLSLAKCEYLADAIIDSYH 464 (467)
Q Consensus 401 ~~~~~~~~~~~~g~f~~~~l~---~~~~~~ll~~~gI~v~~g---------g--Ris~~~~~~~~i~~~~~~l~~~l~ 464 (467)
+.+..|++|+|+|+.+. .++++.++ ++||.+.|| + ||||+..+++++++++++|.+++.
T Consensus 358 ----~~~~~p~gg~f~~~~l~~~~~~~~~~l~-~~gV~v~pg~~f~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~~~ 430 (431)
T PRK15481 358 ----IAIPSPGDGLNLWLPLDTDSQATALTLA-KSGWLVREGEAFGVSAPSHGLRITLSTLNDAEINRLAADLHQALN 430 (431)
T ss_pred ----CccccCCCeEEEEEECCCCHHHHHHHHH-HCCcEEecCCccccCCCCCeEEEEcCCCChHHHHHHHHHHHHHhc
Confidence 56668999999999773 34555655 579999996 1 999998888999999999999875
No 64
>PRK07568 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-43 Score=358.51 Aligned_cols=341 Identities=17% Similarity=0.177 Sum_probs=272.4
Q ss_pred CCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchh
Q 012238 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (467)
Q Consensus 83 ~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (467)
.++|+|+.|.+ ..+. ++.+.+++.+... ....|.+..|.+++|+++++++. .++..+++++|++ |+|+++
T Consensus 30 ~~~i~l~~~~~----~~~~-~~~~~~a~~~~~~--~~~~Y~~~~g~~~lr~~ia~~~~-~~~~~~~~~~i~~--t~G~~~ 99 (397)
T PRK07568 30 IKVYHLNIGQP----DIKT-PEVFFEAIKNYDE--EVLAYSHSQGIPELREAFAKYYK-KWGIDVEPDEILI--TNGGSE 99 (397)
T ss_pred CCEEEecCCCC----CCCC-CHHHHHHHHHHhc--CCcCcCCCCCCHHHHHHHHHHHH-HhCCCCCcceEEE--cCChHH
Confidence 46999999987 4444 6788888877643 24679999999999999999987 4577778899999 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCC-CChhhHHHHHHcCCCCcEEEEeCCCCCC
Q 012238 163 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVG-LDFEGMIADIKAAPGGSFILLHGCAHNP 241 (467)
Q Consensus 163 al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~-~d~~~l~~~l~~~~~~~~~i~i~~p~NP 241 (467)
++.++ +...+.+||+|++++|+|..|...++..|++++.++++++.++. .|++.+++.++ ++++++++++||||
T Consensus 100 al~~~--~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~g~~~~~~~~l~~~~~---~~~~~v~i~~p~NP 174 (397)
T PRK07568 100 AILFA--MMAICDPGDEILVPEPFYANYNGFATSAGVKIVPVTTKIEEGFHLPSKEEIEKLIT---PKTKAILISNPGNP 174 (397)
T ss_pred HHHHH--HHHhcCCCCEEEEecCCCccHHHHHHHcCCEEEEeecCcccCCCCCCHHHHHHhcC---ccceEEEEECCCCC
Confidence 99997 33346799999999999999999999999999999985333444 36788888876 56778889999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecC
Q 012238 242 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 321 (467)
Q Consensus 242 TG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~ 321 (467)
||.+++.+++++|+++|+++|++||+||+|.++.+++. ...++..+....+++++++||||.|+++|+|+||++ +.
T Consensus 175 tG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~--~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~~~--~~ 250 (397)
T PRK07568 175 TGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGL--KYTSALSLEGLEDRVIIIDSVSKRYSACGARIGCLI--SK 250 (397)
T ss_pred CCccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCC--CccChhhcCCCcCCEEEEecchhhccCCCcceEEEe--cC
Confidence 99999999999999999999999999999999987531 122332332235689999999999999999999995 45
Q ss_pred CHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC
Q 012238 322 SSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKS 401 (467)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~ 401 (467)
++++++. +.+.... ..+++.+.|.++..+|++. +.++++.++.++++++.+.+.|+ +++
T Consensus 251 ~~~~~~~------------~~~~~~~-~~~~s~~~q~~~~~~l~~~------~~~~~~~~~~~~~~~~~l~~~L~-~~~- 309 (397)
T PRK07568 251 NKELIAA------------AMKLCQA-RLSPPTLEQIGAAALLDTP------ESYFDEVREEYKKRRDILYEELN-KIP- 309 (397)
T ss_pred CHHHHHH------------HHHHhhc-cCCCCcHHHHHHHHHhhCC------HHHHHHHHHHHHHHHHHHHHHHh-cCC-
Confidence 6777776 3333222 3467788999999888754 23467888999999999999998 763
Q ss_pred CCCcccccCCcceEEecCCC----HHHHHHHHHc-----ccEEEeCC-----------C--eEEeccCChhhHHHHHHHH
Q 012238 402 GKDWSFILRQIGMFSFTGLN----KAQSDNMTNK-----WHVYMTKD-----------G--RISLAGLSLAKCEYLADAI 459 (467)
Q Consensus 402 ~~~~~~~~~~~g~f~~~~l~----~~~~~~ll~~-----~gI~v~~g-----------g--Ris~~~~~~~~i~~~~~~l 459 (467)
.+.+..|+||+|+|+.+. .++.++++++ +||.+.|| + ||+|+. ++++++.++++|
T Consensus 310 --~~~~~~p~g~~~~~~~l~~~~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~~~iRls~~~-~~~~~~~~~~~l 386 (397)
T PRK07568 310 --GVVCEKPKGAFYIIAKLPVDDAEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIAYVL-NEEDLKRAMEIL 386 (397)
T ss_pred --CceecCCCcceEEEEecCCCCHHHHHHHHHhhcccccceEEEeCchHhcCCCCCCCCeEEEEEeC-CHHHHHHHHHHH
Confidence 156778899999998762 3556677654 69999885 1 999986 789999999999
Q ss_pred HHHHHhc
Q 012238 460 IDSYHNV 466 (467)
Q Consensus 460 ~~~l~~~ 466 (467)
.+++++.
T Consensus 387 ~~~l~~~ 393 (397)
T PRK07568 387 KEALEKY 393 (397)
T ss_pred HHHHHHh
Confidence 9988764
No 65
>PRK09275 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.1e-44 Score=366.46 Aligned_cols=347 Identities=14% Similarity=0.105 Sum_probs=257.4
Q ss_pred CcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCC-CCccc-c--cCceeeeecCC
Q 012238 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGA-DNSVL-K--EQRVATVQGLS 159 (467)
Q Consensus 84 ~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~-~~~~~-~--~~~i~~~~t~g 159 (467)
++|||++|+| ++++ ++.+.++...+. + ..|++..|.+++|+++++++... .+... . +++|++ |+|
T Consensus 101 ~~i~l~~g~p----~~~~-~~~v~e~~~~~~--~--~~Y~~~~g~~~lreaia~~~~~~~~~~~~~~~~~~~I~v--T~G 169 (527)
T PRK09275 101 DAVSYVRDQL----GFDA-DEFVYELVDGII--G--DNYPVPDRMLKHTEKIVKDYLRQEMCGGRPPKGEFDLFA--VEG 169 (527)
T ss_pred HHHhhcCCCC----CCCC-CHHHHHHHHHHh--c--CCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEE--eCC
Confidence 6799999999 7766 777888555442 2 24999999999999999965443 22221 2 348998 999
Q ss_pred chhHHHHHHHHH---HHhCCCCEEEEcCCCCcchHHHHhhCCCCeE--EeeeecCCCCCCChhhHHHHHHcCCCCcEEEE
Q 012238 160 GTGSLRLAAALI---ERYFPGAKVLISSPTWGNHKNIFNDARVPWS--EYRYYDPKTVGLDFEGMIADIKAAPGGSFILL 234 (467)
Q Consensus 160 gt~al~l~~~~l---~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~--~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~ 234 (467)
+++++..+.+.+ ..+.|||+|++++|+|+.|..+++..|+.++ .++.+++++|.+|++.+++.++ +++++++
T Consensus 170 a~~al~~~~~aL~~~~ll~pGD~Vlv~~P~y~~Y~~~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~---~~tkai~ 246 (527)
T PRK09275 170 GTAAMCYIFDSLKENGLLKAGDKIALMTPIFTPYLEIPELPRYDLEVVHINADEENEWQYPDSELEKLRD---PSIKALF 246 (527)
T ss_pred HHHHHHHHHHHHhhhhcCCCCCEEEEeCCChHHHHHHHHHcCCCeEEEEeecCcccCCCCCHHHHHhhcC---CCCCEEE
Confidence 999999873322 1467999999999999999999888765554 4544445578999999998776 6788999
Q ss_pred eCCCCCCCCCCCCHHHHHHHHHHHHh--cCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCc
Q 012238 235 HGCAHNPTGIDPTPEQWEKIADVIQE--KNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAER 312 (467)
Q Consensus 235 i~~p~NPTG~~~~~~~l~~l~~~~~~--~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R 312 (467)
++|||||||.+++.+++++|+++|++ +|++||+||+|.+|.+. ..++... ..+++|+++||||.|+++|||
T Consensus 247 l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~-----~~s~~~~--~~~~~I~v~SfSK~f~mtG~R 319 (527)
T PRK09275 247 LVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVDD-----FRSLFAV--LPYNTILVYSFSKYFGATGWR 319 (527)
T ss_pred EeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhccc-----ccCHHHh--CCCCEEEEeehhhhccCcHhH
Confidence 99999999999999999999999965 49999999999998752 1122111 336899999999999999999
Q ss_pred cceEEEecCCHH-HHhh----h----------------hhhhHHHHHHH----HHhhccCccCCCchHHHHHH-----HH
Q 012238 313 IGAMNVVCSSSD-LAAR----C----------------CEVAVIQVKSQ----LKRLARPMYSNPPVHGARIV-----AN 362 (467)
Q Consensus 313 iG~~~~v~~~~~-~~~~----~----------------~~~~~~~~~~~----l~~~~~~~~~~~~~~~~~~~-----~~ 362 (467)
+||++ ++++ +.++ - -++.-.++.++ .+++......+++...|.++ ..
T Consensus 320 lG~i~---~~~~~v~~~~i~~l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~~~~t~~~s~p~Q~a~al~~~~a 396 (527)
T PRK09275 320 LGVIA---LHEDNVFDKLIAKLPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFA 396 (527)
T ss_pred Hhhhh---cCchhHHHHHHHhccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHH
Confidence 99995 5543 2222 0 00000011111 24555555667777777752 23
Q ss_pred HhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceEEecCCC---------------------
Q 012238 363 VVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLN--------------------- 421 (467)
Q Consensus 363 ~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~~~g~f~~~~l~--------------------- 421 (467)
+|... .++++++++.++++|+.+.+.|. . + +...+|+|+||+|+++.
T Consensus 397 ll~~~------~~~~~~~~~~~~~Rr~~l~~~Lg-~-~----~~~~~p~g~fY~~~di~~~~~~~~g~~f~~~l~~~~~~ 464 (527)
T PRK09275 397 LLDEE------DAYKKAMKDIIRRRYKALYEGLG-L-P----EPEDPNNAAYYTLIDLEEWAEKNYGKEFADYLKKNYSP 464 (527)
T ss_pred HHhCc------hHHHHHHHHHHHHHHHHHHHHcC-C-C----CcCCCCCeeEEEEEEhHHhhhhccCchhhhhhhccCCH
Confidence 34432 23467889999999999988774 2 2 34457899999998642
Q ss_pred HHHHHHHHHcccEEEeCCC---------eEEeccCChhhHHHHHHHHHHHHHhc
Q 012238 422 KAQSDNMTNKWHVYMTKDG---------RISLAGLSLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 422 ~~~~~~ll~~~gI~v~~gg---------Ris~~~~~~~~i~~~~~~l~~~l~~~ 466 (467)
.+++.+|++++||.+.||. |||++..+++++..+.++|++++.++
T Consensus 465 ~~f~~~Ll~e~gV~v~PG~~Fg~~~~~vRis~a~~~~~~~~~~~~rl~~~l~~y 518 (527)
T PRK09275 465 VDLLFRLAEETGVVLLPGGGFGGPEWSVRVSLANLNEEDYAKIGKAIRKLLDEY 518 (527)
T ss_pred HHHHHHHHhcCCEEEeCchhhCCCCCeEEEEEecCCHHHHHHHHHHHHHHHHHH
Confidence 2457799999999999982 99999878899999999999998753
No 66
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=100.00 E-value=3.5e-44 Score=357.90 Aligned_cols=344 Identities=21% Similarity=0.247 Sum_probs=279.4
Q ss_pred CcEEecCcccCCCCCCCCchHHHHHHHHH-HHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccC-ceeeeecCCch
Q 012238 84 KKLNLGVGAYRTEELQPYVLDVVKKAENL-MLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQ-RVATVQGLSGT 161 (467)
Q Consensus 84 ~~i~l~~G~~~d~~~~p~~~~~v~~a~~~-~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~-~i~~~~t~ggt 161 (467)
++|||+.|.+......++ ++.+.++..+ .........|++..|.++||+++|+++++.++..++++ +|++ ++|++
T Consensus 2 ~~I~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~--~~G~~ 78 (363)
T PF00155_consen 2 DVINLGSNAPLLLSQNPP-PPAAIKAAIRGAATSSSFLGYPPPQGYPELREAIADFLGRRYGVPVDPEANILV--TSGAQ 78 (363)
T ss_dssp TEEESSSSSTSSTTSSHH-HHHHHHHHHHHHHHHTGCTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEE--ESHHH
T ss_pred CEEEEECCCCCCcccccc-hHHHHHHHHHHhhcccccccCCCchhhHHHHHHHHHHhhhccCcccccceEEEE--ecccc
Confidence 689999999955434433 5666666654 33334458999999999999999999986778888888 9988 88888
Q ss_pred hHHHHHHHHHHH-hCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCC---CcEEEEeCC
Q 012238 162 GSLRLAAALIER-YFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPG---GSFILLHGC 237 (467)
Q Consensus 162 ~al~l~~~~l~~-~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~---~~~~i~i~~ 237 (467)
+++.++. ... ..+||+|+++.|+|+.|...++..|++++.++++.++++.+|++.+++.+++.+. +++++++++
T Consensus 79 ~~~~~~~--~~~~~~~~~~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~ 156 (363)
T PF00155_consen 79 AALFLLL--RLLKINPGDTVLVPDPCYPSYIEAARLLGAEVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICN 156 (363)
T ss_dssp HHHHHHH--HHHHSSTTSEEEEEESSSTHHHHHHHHTTSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEES
T ss_pred cchhhhh--hcccccccccceecCCccccccccccccCceeeeccccccccccccccccccccccccccccccceeeecc
Confidence 8888862 223 4599999999999999999999999999999987677889999999999986321 467999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEE
Q 012238 238 AHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMN 317 (467)
Q Consensus 238 p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~ 317 (467)
||||||.+++.+++++|+++|++||++||+||+|.++.++.. +..+.....+...++++++||||.||++|+|+||++
T Consensus 157 p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~--~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRvG~i~ 234 (363)
T PF00155_consen 157 PNNPTGSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGDP--DFGPIRSLLDEDDNVIVVGSLSKSFGLPGLRVGYIV 234 (363)
T ss_dssp SBTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSS--HTHHHHGHHTTTSTEEEEEESTTTTTSGGGTEEEEE
T ss_pred cccccccccccccccchhhhhcccccceeeeeceeccccCCC--ccCcccccccccccceeeeecccccccccccccccc
Confidence 999999999999999999999999999999999999998742 333333445556679999999999999999999996
Q ss_pred EecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 012238 318 VVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSA 397 (467)
Q Consensus 318 ~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~ 397 (467)
.++++++. ++........ +.+.|.++..++.+.... .+++++.+++++++++.+.+.|+
T Consensus 235 ---~~~~~~~~------------l~~~~~~~~~--~~~~~~~~~~~l~~~~~~---~~~~~~~~~~l~~~~~~l~~~L~- 293 (363)
T PF00155_consen 235 ---APPELIER------------LRRFQRSGLS--SSPMQAAAAAALSDPELV---EKWLEELRERLRENRDLLREALE- 293 (363)
T ss_dssp ---EEHHHHHH------------HHHHHHHTTS--SHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred ---chhhhhhh------------hhhccccccc--cchhhHHHHHhhhccccc---ccccccchhhHHHHHHHHHHHHH-
Confidence 57777777 6655554333 777888888888766432 23588999999999999999998
Q ss_pred ccCCCCCcccccCCcceEEecCCCH----HHHHHHHHcccEEEeCCC--------eEEeccCChhhHHHHHHHH
Q 012238 398 KDKSGKDWSFILRQIGMFSFTGLNK----AQSDNMTNKWHVYMTKDG--------RISLAGLSLAKCEYLADAI 459 (467)
Q Consensus 398 ~~g~~~~~~~~~~~~g~f~~~~l~~----~~~~~ll~~~gI~v~~gg--------Ris~~~~~~~~i~~~~~~l 459 (467)
+.+ +.+..+++|+|+|..++. +++++|++++||.+.||. ||+++..+++++++++++|
T Consensus 294 ~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gi~v~pg~~~~~~~~iRi~~a~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 294 EIG----ITVLPPEAGFFLWVRLDPNDAEELAQELLEEYGILVRPGSYFGVPGYIRISLASHSEEDLEEALERL 363 (363)
T ss_dssp HTT----SEEEHHSBSSEEEEEESHHHHHHHHHHHHHHHTEEEEEGGGGTSTTEEEEEGGCSCHHHHHHHHHHH
T ss_pred Hhh----hheeeccCccEEEEEcccchHHHHHHHHHHhCCEEEEecCCCCCCCEEEEEeccCCHHHHHHHHhhC
Confidence 776 688888899999997643 567888887799999972 9999666999999999886
No 67
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=100.00 E-value=2.9e-43 Score=351.14 Aligned_cols=345 Identities=14% Similarity=0.119 Sum_probs=264.8
Q ss_pred cccCCCCCCCCcccchHHHhhcCCCCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHH
Q 012238 58 RFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAE 137 (467)
Q Consensus 58 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~ 137 (467)
++++++..+...+.+....... ...++|+|+.|.| ..+. ++.+.+++.+.... ..|.+..|.+++|+++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~l~~~~p----~~~~-~~~~~~~~~~~~~~---~~Y~~~~G~~~lr~~ia~ 73 (364)
T PRK07865 3 VSARLPDFPWDTLAPAKATAAA-HPDGIVDLSVGTP----VDPV-PPVIQEALAAAADA---PGYPTTAGTPELREAIVG 73 (364)
T ss_pred ccccCCCccHHHHHHHHHHHHh-cCCCEEEcCCCCC----CCCC-CHHHHHHHHHHHhh---CCCCCccCCHHHHHHHHH
Confidence 4456666666656554444433 3347899999987 3333 67788888765432 579888999999999999
Q ss_pred HHhCCCCcc-cccCceeeeecCCchhHHHHHHHHHHH-hCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCC
Q 012238 138 LLFGADNSV-LKEQRVATVQGLSGTGSLRLAAALIER-YFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLD 215 (467)
Q Consensus 138 ~l~~~~~~~-~~~~~i~~~~t~ggt~al~l~~~~l~~-~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d 215 (467)
++...+|.. +++++|++ |+|+++++.++. ... +.+||.|++++|+|+.|...++..|++++.++.
T Consensus 74 ~l~~~~~~~~~~~~~I~i--t~G~~~~i~~~~--~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~--------- 140 (364)
T PRK07865 74 WLARRRGVTGLDPAAVLP--VIGSKELVAWLP--TLLGLGPGDVVVIPELAYPTYEVGARLAGATVVRADS--------- 140 (364)
T ss_pred HHHHHcCCCCCCcccEEE--ccChHHHHHHHH--HHHcCCCCCEEEECCCCcccHHHHHHhcCCEEEecCC---------
Confidence 998877776 88999999 999999999863 333 479999999999999999999999999887742
Q ss_pred hhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHH--hcC
Q 012238 216 FEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFA--TRG 293 (467)
Q Consensus 216 ~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~--~~~ 293 (467)
++.+.. .+++++++++||||||.+++.+++++|+++|+++|++||+||+|.++.+++. ......... ...
T Consensus 141 ~~~l~~------~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~--~~~~~~~~~~~~~~ 212 (364)
T PRK07865 141 LTELGP------QRPALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWDAE--PVSILDPRVCGGDH 212 (364)
T ss_pred hhhCCc------ccceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhhhccCCC--CCccccccccCCcc
Confidence 222211 4567888899999999999999999999999999999999999999887531 111110000 123
Q ss_pred CeEEEEecCccCcccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHH
Q 012238 294 MELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEW 373 (467)
Q Consensus 294 ~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~ 373 (467)
+++++++||||.|++||+|+||++ +++++++. +.........+++.+.|.++..+|.+.
T Consensus 213 ~~~i~~~S~SK~~~~~GlRiG~i~---~~~~~~~~------------~~~~~~~~~~~~~~~~q~~~~~~l~~~------ 271 (364)
T PRK07865 213 TGLLAVHSLSKQSNLAGYRAGFVA---GDPALVAE------------LLEVRKHAGMMVPAPVQAAMVAALGDD------ 271 (364)
T ss_pred ceEEEEeechhccCCCceeeEEEe---cCHHHHHH------------HHHHHHhcCCCcCHHHHHHHHHHhCCH------
Confidence 589999999999999999999995 78888887 554444444567788899988888763
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceEEecCC--CHHHHHHHHHcccEEEeCCC----------e
Q 012238 374 KAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL--NKAQSDNMTNKWHVYMTKDG----------R 441 (467)
Q Consensus 374 ~~~l~~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~~~g~f~~~~l--~~~~~~~ll~~~gI~v~~gg----------R 441 (467)
+++++.++.++++++.+.+.|+ +.| +.+..+++|+|+|+.+ +...+.+.++++||.+.||. |
T Consensus 272 -~~~~~~~~~~~~~~~~l~~~L~-~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~pg~~f~~~~~~~iR 345 (364)
T PRK07865 272 -AHVREQRERYARRRAVLRPALE-AAG----FRVDHSEAGLYLWATRGEDCWDTVAWLAERGILVAPGDFYGPAGAQHVR 345 (364)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHH-HcC----CcccCCCccEEEEEeCCCCHHHHHHHHHHCCEEEeCccccCcCCCCEEE
Confidence 2356778899999999999999 776 5677889999999865 33333444556799998861 9
Q ss_pred EEeccCChhhHHHHHHHHH
Q 012238 442 ISLAGLSLAKCEYLADAII 460 (467)
Q Consensus 442 is~~~~~~~~i~~~~~~l~ 460 (467)
|+++. +++++++++++|+
T Consensus 346 i~~~~-~~~~~~~~~~~l~ 363 (364)
T PRK07865 346 VALTA-TDERIAAAVERLA 363 (364)
T ss_pred EEecC-CHHHHHHHHHHhh
Confidence 99987 7899999998875
No 68
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=100.00 E-value=4.8e-43 Score=353.77 Aligned_cols=342 Identities=16% Similarity=0.125 Sum_probs=258.1
Q ss_pred CCCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcC----CCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeee
Q 012238 81 TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG----ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQ 156 (467)
Q Consensus 81 ~~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~----~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~ 156 (467)
+++++|+|+.|++ ..++ ++.+.+++.+.+... ....|.|..|.++||+++|+++... + +++++|++
T Consensus 31 ~~~~~i~l~~~~~----~~~~-~~~v~~~~~~~~~~~~~~~~~~~Y~p~~g~~~lr~aia~~~~~~-~--~~~d~I~i-- 100 (402)
T TIGR03542 31 PSADIIRLGIGDT----TQPL-PASVIEAFHNAVDELASEETFRGYGPEQGYPFLREAIAENDYRG-R--IDPEEIFI-- 100 (402)
T ss_pred CCCCeEEcCCCCC----CCCC-CHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHhc-C--CCHHHEEE--
Confidence 4568999999987 4444 777888887776431 2356989999999999999986432 1 66899999
Q ss_pred cCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCC-----------CeEEeeeecCCCCCCChhhHHHHHHc
Q 012238 157 GLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARV-----------PWSEYRYYDPKTVGLDFEGMIADIKA 225 (467)
Q Consensus 157 t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~-----------~~~~v~~~~~~~~~~d~~~l~~~l~~ 225 (467)
|+|+++++.++ ...+.+||+|++++|+|..|...++..|+ +++.++++++.++.+|++. .
T Consensus 101 t~Ga~~al~~l---~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~------~ 171 (402)
T TIGR03542 101 SDGAKCDVFRL---QSLFGSDNTVAVQDPVYPAYVDSNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDLPE------E 171 (402)
T ss_pred CCCcHHHHHHH---HHhcCCCCEEEEeCCCCcchHHHHHHcCCccccccccccceEEEeecchhhCCCCCccc------c
Confidence 99999999985 34567999999999999999999999999 8888888544444444321 1
Q ss_pred CCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccC
Q 012238 226 APGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKN 305 (467)
Q Consensus 226 ~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 305 (467)
.+++++++++||||||.+++.+++++|+++|+++|++||+||+|.+|.+++. ...++..+....+++|+++||||.
T Consensus 172 --~~~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~--~~~~~~~~~~~~~~vi~~~SfSK~ 247 (402)
T TIGR03542 172 --PKIDIIYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPS--LPHSIFEIPGAKECAIEFRSFSKT 247 (402)
T ss_pred --CCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCC--CCcchhhCCCCcccEEEEecCccc
Confidence 4567888899999999999999999999999999999999999999987531 112222221223578999999999
Q ss_pred cccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHH
Q 012238 306 LGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIK 385 (467)
Q Consensus 306 ~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~ 385 (467)
||+||+|+||++ ++++++... ...+...+.......+.+++.+.|.++..++.+..+ +.+.+.++.++
T Consensus 248 ~g~pGlRiG~~i---~~~~l~~~~----~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~-----~~~~~~~~~~~ 315 (402)
T TIGR03542 248 AGFTGVRLGWTV---VPKELTYAD----GHSVIQDWERRQCTKFNGASYPVQRAAEAAYAGEGL-----QPILEAISYYM 315 (402)
T ss_pred cCCCCcceEEEE---ecHHHhhcc----hhhHHHHHHHHhhhcccCCCHHHHHHHHHHHcCcch-----hHHHHHHHHHH
Confidence 999999999996 666665110 000111122222222445778889888888876533 22455678899
Q ss_pred HHHHHHHHHhhhccCCCCCcccccCCcceEEecCC----C-HHHHHHHHHcccEEEeCCC----------eEEeccCChh
Q 012238 386 NVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL----N-KAQSDNMTNKWHVYMTKDG----------RISLAGLSLA 450 (467)
Q Consensus 386 ~~r~~l~~~l~~~~g~~~~~~~~~~~~g~f~~~~l----~-~~~~~~ll~~~gI~v~~gg----------Ris~~~~~~~ 450 (467)
++|+.+.+.|+ +.+ +++..+.+|+|+|+.+ + .++++++++++||.+.||. ||+++. +++
T Consensus 316 ~~~~~~~~~L~-~~~----~~~~~~~~~~f~~v~l~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~-~~~ 389 (402)
T TIGR03542 316 ENARILRKALE-AAG----FKVYGGEHAPYLWVKTPEGISSWDFFDFLLYQYHVVGTPGSGFGPSGEGFVRFSAFG-KRE 389 (402)
T ss_pred HHHHHHHHHHH-hcC----ceecCCCceeEEEEECCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC-CHH
Confidence 99999999998 765 5667778899999865 2 3567788877899999971 999877 889
Q ss_pred hHHHHHHHHHHHH
Q 012238 451 KCEYLADAIIDSY 463 (467)
Q Consensus 451 ~i~~~~~~l~~~l 463 (467)
+++.++++|++++
T Consensus 390 ~l~~~l~~l~~~~ 402 (402)
T TIGR03542 390 NIVEACERIKEAL 402 (402)
T ss_pred HHHHHHHHHHhhC
Confidence 9999999998763
No 69
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.3e-42 Score=347.39 Aligned_cols=333 Identities=16% Similarity=0.223 Sum_probs=258.5
Q ss_pred CCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCC-CCcCCCCcchHHHHHHHHHHHhCCC--CcccccCceeeeecCC
Q 012238 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-NKEYLPIEGLAAFNKVTAELLFGAD--NSVLKEQRVATVQGLS 159 (467)
Q Consensus 83 ~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~-~~~Y~~~~G~~~lr~aia~~l~~~~--~~~~~~~~i~~~~t~g 159 (467)
+..++|+.|+| .+++ ++.+.+++.+.+..+. ...| |..|.++||+++|+++...+ +..+++++|++ |+|
T Consensus 28 ~~~~~l~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~Y-~~~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~i--t~G 99 (374)
T PRK02610 28 IQLDRLDTNEF----PYDL-PPDLKQKLAWLYQQGIESNRY-PDGGHEALKQAIAEYVNESAAGSSQITPANISV--GNG 99 (374)
T ss_pred cceeEecCCCC----CCCC-CHHHHHHHHHHHhhcccccCC-CCCchHHHHHHHHHHhCccccccCCCCHHHEEE--cCC
Confidence 35899999988 5554 7889999988765432 2568 56799999999999987665 46688999999 999
Q ss_pred chhHHHHHHHHHHHhCCCC-EEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcC-CCCcEEEEeCC
Q 012238 160 GTGSLRLAAALIERYFPGA-KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA-PGGSFILLHGC 237 (467)
Q Consensus 160 gt~al~l~~~~l~~~~~gd-~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~-~~~~~~i~i~~ 237 (467)
+++++.++ +...+.+|| +|++++|+|..|...++..|++++.++++ ++++++|++.+++.+++. ..+++++++++
T Consensus 100 a~~al~~~--~~~~~~~g~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~-~~~~~~d~~~l~~~~~~~~~~~~k~i~l~~ 176 (374)
T PRK02610 100 SDELIRSL--LIATCLGGEGSILVAEPTFSMYGILAQTLGIPVVRVGRD-PETFEIDLAAAQSAIEQTQNPPVRVVFVVH 176 (374)
T ss_pred hHHHHHHH--HHHHcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEecCC-cccCCCCHHHHHHHHHhhcCCCceEEEEeC
Confidence 99999876 444566786 89999999999999999999999999974 446899999999988631 13678888899
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEE
Q 012238 238 AHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMN 317 (467)
Q Consensus 238 p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~ 317 (467)
||||||.+++.+++++|+++| +|++||+||+|.+|.+. . .+..+ ...+++|+++||||.||+||+|+||++
T Consensus 177 P~NPTG~~~s~~~l~~l~~~~--~~~~iI~De~Y~~~~~~----~--~~~~~-~~~~~~ivi~SfSK~~g~~GlRiG~~v 247 (374)
T PRK02610 177 PNSPTGNPLTAAELEWLRSLP--EDILVVIDEAYFEFSQT----T--LVGEL-AQHPNWVILRTFSKAFRLAAHRVGYAI 247 (374)
T ss_pred CCCCCCCCCCHHHHHHHHhcc--CCcEEEEeccccccCcc----c--hHHHH-hcCCCEEEEEecchhccCcccceeeee
Confidence 999999999999999999876 49999999999998642 1 12122 334678999999999999999999996
Q ss_pred EecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 012238 318 VVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSA 397 (467)
Q Consensus 318 ~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~ 397 (467)
+++++++. +.+... ..+.+.+.|.++..+|++. +.+++.+++.++ .|+.+.+.|+
T Consensus 248 ---~~~~l~~~------------l~~~~~--~~~~~~~~q~a~~~~l~~~------~~~~~~~~~~~~-~r~~l~~~L~- 302 (374)
T PRK02610 248 ---GHPELIAV------------LEKVRL--PYNLPSFSQLAAQLALEHR------QELLAAIPEILQ-ERDRLYQALQ- 302 (374)
T ss_pred ---cCHHHHHH------------HHHhcC--CCCCCHHHHHHHHHHhcCH------HHHHHHHHHHHH-HHHHHHHHHH-
Confidence 78888887 555543 2356788999998888764 222344444444 4777888888
Q ss_pred ccCCCCCcccccCCcceEEecCC----CHHHHHHHHHcccEEEeCCC---eEEeccCChhhHHHHHHHHHHHHHhc
Q 012238 398 KDKSGKDWSFILRQIGMFSFTGL----NKAQSDNMTNKWHVYMTKDG---RISLAGLSLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 398 ~~g~~~~~~~~~~~~g~f~~~~l----~~~~~~~ll~~~gI~v~~gg---Ris~~~~~~~~i~~~~~~l~~~l~~~ 466 (467)
.++ + +.+ .|++|+|+|+.+ +.+.+.+.++++||.+.++. ||+++. .+++++++++|+++++++
T Consensus 303 ~~~--~-~~~-~p~~g~f~~~~l~~~~~~~~~~~~l~~~gi~v~~~~~~lRls~~~--~~~~~~~l~~l~~~l~~~ 372 (374)
T PRK02610 303 ELP--Q-LRV-WPSAANFLYLRLSQDAALAALHQALKAQGTLVRHTGGGLRITIGT--PEENQRTLERLQAALTQL 372 (374)
T ss_pred hCC--C-cEe-CCCcceEEEEeCCCCCCHHHHHHHHHHCCEEEEeCCCeEEEeCCC--HHHHHHHHHHHHHHHhhc
Confidence 763 1 454 477889999865 33444444556799998753 999986 467899999999998765
No 70
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=100.00 E-value=2e-42 Score=324.25 Aligned_cols=347 Identities=16% Similarity=0.131 Sum_probs=291.5
Q ss_pred CCCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCc
Q 012238 81 TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 160 (467)
Q Consensus 81 ~~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~gg 160 (467)
++++++.|.+.+. +++. +|.|.+|+++.++.+. .+|+ .+.+++-+++++|...+++..++++.|++ +.|.
T Consensus 23 g~~DvlPmWVADM----Df~~-pp~i~~Al~~rvdhGv-fGY~--~~~~~~~~ai~~w~~~r~~~~i~~e~i~~--~p~V 92 (388)
T COG1168 23 GNEDVLPMWVADM----DFPT-PPEIIEALRERVDHGV-FGYP--YGSDELYAAIAHWFKQRHQWEIKPEWIVF--VPGV 92 (388)
T ss_pred CCCCcceeeeecc----cCCC-CHHHHHHHHHHHhcCC-CCCC--CCCHHHHHHHHHHHHHhcCCCCCcceEEE--cCcc
Confidence 3468999999988 7775 8999999999998775 8884 67889999999999999999999999999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeec-CCCCCCChhhHHHHHHcCCCCcEEEEeCCCC
Q 012238 161 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYD-PKTVGLDFEGMIADIKAAPGGSFILLHGCAH 239 (467)
Q Consensus 161 t~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~-~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~ 239 (467)
..++.++ +.....|||.|++..|.|+++.+.++..|.+++..|+.. +..+.+|++.|++.+.+ ++.+++++||||
T Consensus 93 Vpgi~~~--I~~~T~~gd~Vvi~tPvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~--~~vkl~iLCnPH 168 (388)
T COG1168 93 VPGISLA--IRALTKPGDGVVIQTPVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVD--ERVKLFILCNPH 168 (388)
T ss_pred hHhHHHH--HHHhCcCCCeeEecCCCchHHHHHHhhcCcEEEeccccccCCcEEecHHHHHHHHhc--CCccEEEEeCCC
Confidence 9999997 444456999999999999999999999999999999863 44567899999999985 566899999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHH-hcCCeEEEEecCccCcccCCCccceEEE
Q 012238 240 NPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFA-TRGMELLVAQSYSKNLGLYAERIGAMNV 318 (467)
Q Consensus 240 NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~S~SK~~~~~G~RiG~~~~ 318 (467)
||||.+++.++|++|.++|++||+.||+||+++++.+.+. ...+...+. ...++.+.+.|-||+|+++|+.+++++
T Consensus 169 NP~Grvwt~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~--~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~I- 245 (388)
T COG1168 169 NPTGRVWTKEELRKIAELCLRHGVRVISDEIHADLVLGGH--KHIPFASLSERFADNSITLTSASKTFNLAGLKCAYII- 245 (388)
T ss_pred CCCCccccHHHHHHHHHHHHHcCCEEEeecccccccccCC--CccchhhcChhhhcceEEEeeccccccchhhhheeEE-
Confidence 9999999999999999999999999999999999998752 222221111 224789999999999999999999997
Q ss_pred ecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 012238 319 VCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAK 398 (467)
Q Consensus 319 v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~ 398 (467)
..++++.++ +.+++++ ....+++.++..+...+.+++ ...+++..+.++.+++++.+.+. +
T Consensus 246 -i~n~~lr~~--------~~~~l~~---~~~~~~n~lg~~A~~aAY~~G------~~WLd~L~~yl~~N~~~~~~~l~-~ 306 (388)
T COG1168 246 -ISNRELRAK--------FLKRLKR---NGLHGPSALGIIATEAAYNQG------EPWLDELLEYLKDNRDYVADFLN-K 306 (388)
T ss_pred -ecCHHHHHH--------HHHHHHH---hcCCCCchHHHHHHHHHHHhc------hHHHHHHHHHHHHHHHHHHHHHH-h
Confidence 588887666 5554543 345578888888888777766 33478899999999999999998 4
Q ss_pred cCCCCCcccccCCcceEEecCC-----CH-HHHHHHHHcccEEEeCC--------C--eEEeccCChhhHHHHHHHHHHH
Q 012238 399 DKSGKDWSFILRQIGMFSFTGL-----NK-AQSDNMTNKWHVYMTKD--------G--RISLAGLSLAKCEYLADAIIDS 462 (467)
Q Consensus 399 ~g~~~~~~~~~~~~g~f~~~~l-----~~-~~~~~ll~~~gI~v~~g--------g--Ris~~~~~~~~i~~~~~~l~~~ 462 (467)
. +|+ +++..|+|.+.+|+++ +. +..+.++++.+|.+.+| | |+++++ +.+-+++++++|+.+
T Consensus 307 ~-~P~-v~v~~p~gTYL~WLD~r~l~l~d~~l~~~ll~~akVal~~G~~FG~~g~gf~RlN~ac-pr~~L~eal~ri~~a 383 (388)
T COG1168 307 H-LPG-VKVTEPQGTYLAWLDCRELGLDDSELAEFLLEEAKVALSPGSTFGEEGSGFVRLNFAC-PRAILEEALERLKRA 383 (388)
T ss_pred h-CCC-cEEecCCCceeeeeeccccCCChHHHHHHHHHhhcEeccCCCccCcCCCceEEEecCC-CHHHHHHHHHHHHHH
Confidence 4 233 7899999998899854 54 56778889999999998 2 999999 899999999999999
Q ss_pred HHhc
Q 012238 463 YHNV 466 (467)
Q Consensus 463 l~~~ 466 (467)
+++.
T Consensus 384 l~~~ 387 (388)
T COG1168 384 LKKR 387 (388)
T ss_pred Hhcc
Confidence 8875
No 71
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=6.7e-43 Score=347.48 Aligned_cols=324 Identities=15% Similarity=0.150 Sum_probs=256.6
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCch
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (467)
..++|+|+.|++ .+++ ++.+++++.+.+.. ...| |..|.++||+++++++. +++++|++ |+|++
T Consensus 28 ~~~~i~l~~nen----~~~~-~~~v~~a~~~~~~~--~~~Y-p~~g~~~Lr~aia~~~~------~~~~~I~v--t~Gs~ 91 (366)
T PRK01533 28 DHSFVKLASNEN----PFGC-SPRVLDELQKSWLD--HALY-PDGGATTLRQTIANKLH------VKMEQVLC--GSGLD 91 (366)
T ss_pred CCceEEeCCCCC----CCCC-CHHHHHHHHHHHHh--cCcC-CCCCHHHHHHHHHHHhC------CCcceEEE--CCCHH
Confidence 357899999987 5655 77888888876543 1345 77899999999999973 34889999 99999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCC
Q 012238 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 241 (467)
Q Consensus 162 ~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NP 241 (467)
+++.++ +...+.+||+|+++.|+|+.|...++..|++++.++++ ++++|++.+++.++ ++++++++++||||
T Consensus 92 e~i~~~--~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~---~~~~d~~~l~~~~~---~~~~~v~i~~P~NP 163 (366)
T PRK01533 92 EVIQII--SRAVLKAGDNIVTAGATFPQYRHHAIIEGCEVKEVALN---NGVYDLDEISSVVD---NDTKIVWICNPNNP 163 (366)
T ss_pred HHHHHH--HHHhcCCCCEEEEcCCcHHHHHHHHHHcCCEEEEeecC---CCCcCHHHHHHHhC---cCCcEEEEeCCCCC
Confidence 999997 34446799999999999999999999999999999983 34699999999886 46778889999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecC
Q 012238 242 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 321 (467)
Q Consensus 242 TG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~ 321 (467)
||.+++.+++++|+++|++++ ++|+||+|.+|.++. +..+.....+..+++|+++||||.||+||+|+||++ +
T Consensus 164 TG~~~~~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~~---~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i---~ 236 (366)
T PRK01533 164 TGTYVNDRKLTQFIEGISENT-LIVIDEAYYEYVTAK---DFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAV---G 236 (366)
T ss_pred CCCCcCHHHHHHHHHhCCCCC-EEEEEccHHHhhccc---cCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHh---C
Confidence 999999999999999998776 577799999887642 111122233455789999999999999999999995 7
Q ss_pred CHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC
Q 012238 322 SSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKS 401 (467)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~ 401 (467)
++++++. +.+... ..+++.++|.++..+|++..+ ++..++.++++|+++.+.++ .+|
T Consensus 237 ~~~~~~~------------l~~~~~--~~~~~~~~q~aa~~~l~~~~~-------~~~~~~~~~~~r~~~~~~l~-~~g- 293 (366)
T PRK01533 237 HEELIEK------------LNVVRL--PFNVSSLAQKAATIAFGDDEF-------IEEIVRVNTEGLRQYESFCK-ENE- 293 (366)
T ss_pred CHHHHHH------------HHHhcC--CCCcCHHHHHHHHHHhCCHHH-------HHHHHHHHHHHHHHHHHHHH-hCC-
Confidence 8888887 655543 346888999999999976533 34556677777888888888 776
Q ss_pred CCCcccccCCcceEEecCC-CHHHHHHHHHcccEEEeCCC---eEEeccCChhhHHHHHHHHHHHHHh
Q 012238 402 GKDWSFILRQIGMFSFTGL-NKAQSDNMTNKWHVYMTKDG---RISLAGLSLAKCEYLADAIIDSYHN 465 (467)
Q Consensus 402 ~~~~~~~~~~~g~f~~~~l-~~~~~~~ll~~~gI~v~~gg---Ris~~~~~~~~i~~~~~~l~~~l~~ 465 (467)
+.+.++++ .|+|+.+ +.+.+.+.+.++||.+++.. ||+++. .+++++++++|+++++.
T Consensus 294 ---~~~~~~~~-nf~~~~~~~~~~~~~~l~~~GI~Vr~~~~~iRis~~~--~~~~~~l~~al~~~~~~ 355 (366)
T PRK01533 294 ---IPFYQSQT-NFIFLPVENGGEIYEACAHAGFIIRPFPNGVRITVGT--REQNEGVISVLQQHFEN 355 (366)
T ss_pred ---CccCCCcC-cEEEEeCCCHHHHHHHHHHCCcEEccCCCceEEeCCC--HHHHHHHHHHHHHHHHh
Confidence 46667764 5788876 33334444445799998864 999985 68999999999998764
No 72
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=100.00 E-value=2.6e-42 Score=350.77 Aligned_cols=348 Identities=12% Similarity=0.070 Sum_probs=247.8
Q ss_pred CcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHH-HHhCCCCcc-cccC--ceeeeecCC
Q 012238 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAE-LLFGADNSV-LKEQ--RVATVQGLS 159 (467)
Q Consensus 84 ~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~-~l~~~~~~~-~~~~--~i~~~~t~g 159 (467)
++|+|++|+| ++++ ++.+.+ +.+.+.. ..|+++.|..++|+++++ ++....+.. ..++ +|++ |.|
T Consensus 95 ~~i~l~~g~p----~~~~-~~~~~~-~~~~~~~---~~Y~~p~g~~~~~e~iv~~y~~~~~~~~~~~~~~~~V~i--t~G 163 (521)
T TIGR03801 95 DIISYVIDQL----GFDP-DAFLYE-MCDGIIG---DNYPVPDRMLPHSEKIVHQYLIQEMCGNKPPPGEFDLFA--VEG 163 (521)
T ss_pred HHHhhcCCCC----CCCC-CHHHHH-HHHHhhc---CCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEE--eCC
Confidence 6799999999 6664 555544 4443322 258767777777777775 544433322 2333 8988 999
Q ss_pred chhHHHHHHHHHH---HhCCCCEEEEcCCCCcchHHHHhhC--CCCeEEeeeecCCC-----CCCChhhHHHHHHcCCCC
Q 012238 160 GTGSLRLAAALIE---RYFPGAKVLISSPTWGNHKNIFNDA--RVPWSEYRYYDPKT-----VGLDFEGMIADIKAAPGG 229 (467)
Q Consensus 160 gt~al~l~~~~l~---~~~~gd~Vlv~~P~y~~~~~~~~~~--G~~~~~v~~~~~~~-----~~~d~~~l~~~l~~~~~~ 229 (467)
+++++..+...+. .+.|||+|+++.|+|+.|..+++.. |++++.++.+++.+ |.+|++.+++.++ ++
T Consensus 164 at~al~~~~~~l~~~~ll~pGD~Vlv~~P~y~~y~~~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~---~~ 240 (521)
T TIGR03801 164 GTAAMCYIFDSLKANELLKKGDKIALMTPIFTPYLEIPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKLRD---PS 240 (521)
T ss_pred HHHHHHHHHHHHhHhhcCCCCCEEEEeCCCcHHHHHHHHHhcCCcEEEEeecccccccccccCCCCHHHHHHhcC---CC
Confidence 9999998733221 4679999999999999999998775 66777777753333 8899999988765 67
Q ss_pred cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhc--CCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcc
Q 012238 230 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEK--NHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG 307 (467)
Q Consensus 230 ~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~--~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 307 (467)
+++++++|||||||.+++.+++++|+++|++| |++||+||+|.+|.+. ..++... ..+++|+++||||.||
T Consensus 241 ~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~-----~~sl~~~--~~~~vI~v~SfSK~fg 313 (521)
T TIGR03801 241 IKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVDD-----FRSLFAE--LPYNTIGVYSFSKYFG 313 (521)
T ss_pred CcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhccc-----ccchhhh--CCCCEEEEEcchhhcc
Confidence 88999999999999999999999999999986 9999999999998752 1122121 2358999999999999
Q ss_pred cCCCccceEEEecCCHHHHhh--------------------hhhhhHHH----HHHHHHhhccCccCCCchHHHH--H--
Q 012238 308 LYAERIGAMNVVCSSSDLAAR--------------------CCEVAVIQ----VKSQLKRLARPMYSNPPVHGAR--I-- 359 (467)
Q Consensus 308 ~~G~RiG~~~~v~~~~~~~~~--------------------~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~--~-- 359 (467)
++|||+||++ ..++.+.++ ..+|.-.+ +....+++....+.+.+...|. +
T Consensus 314 ~~G~RlG~i~--~~~~~v~d~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~~~~g~s~p~Q~q~al~ 391 (521)
T TIGR03801 314 ATGWRLGTIA--LHKDNIFDKLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALF 391 (521)
T ss_pred Cchhhhhhhh--cCchHHHHHHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHhccCCCCcHHHHHHHHH
Confidence 9999999996 333322211 00000001 1111233344444555555554 3
Q ss_pred -HHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceEEecCCC-----------------
Q 012238 360 -VANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLN----------------- 421 (467)
Q Consensus 360 -~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~~~g~f~~~~l~----------------- 421 (467)
+..+|... ...++++++.++++++.+.+.|. . . +...+++|+||+|+++.
T Consensus 392 a~~all~~~------~~y~~~~~~~~~~R~~~l~~~Lg-~-~----~~~~~~~g~~Y~~~di~~~~~~~~~~~f~~~l~~ 459 (521)
T TIGR03801 392 SLFALMDKE------NAYKAETKDICRRREKLLFRGLG-L-P----LQEDPNDVAYYTLIDLEEWAEKNYGEEFSSYLKK 459 (521)
T ss_pred HHHHHhccc------hhHHHHHHHHHHHHHHHHHHhcC-C-C----CcCCCCCeEEEEEeehHHHHHHhcchHHHHHHhc
Confidence 33444432 23467888999999999988774 1 1 33457899999998652
Q ss_pred ----HHHHHHHHHcccEEEeCCC---------eEEeccCChhhHHHHHHHHHHHHHhc
Q 012238 422 ----KAQSDNMTNKWHVYMTKDG---------RISLAGLSLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 422 ----~~~~~~ll~~~gI~v~~gg---------Ris~~~~~~~~i~~~~~~l~~~l~~~ 466 (467)
.+++.+|++++||.+.||. |||++.+++++++++.++|+++++++
T Consensus 460 ~~~~~~~~~~L~~e~gV~v~PG~~Fg~~~~~vRisla~l~~~~~~~~~~rl~~~~~~~ 517 (521)
T TIGR03801 460 NYSPVDVLFRLAEETGIVLLPGGGFGGPEWSVRVSLANLNEYDYAEIGRAIRKILDEY 517 (521)
T ss_pred cCCHHHHHHHHHHhCCEEEeCchhcCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Confidence 2457789999999999982 99999878999999999999998653
No 73
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=4.7e-42 Score=341.25 Aligned_cols=332 Identities=14% Similarity=0.122 Sum_probs=256.3
Q ss_pred ccchHHHhhcCCCCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcc-cc
Q 012238 70 ILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSV-LK 148 (467)
Q Consensus 70 i~~~~~~~~~~~~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~-~~ 148 (467)
+.+...+.+. ..+++|||+.|.| ..++ ++.+.+++.+... ...|.+..|.++||+++++++...++.. ++
T Consensus 9 ~~~~~~~~~~-~~~~~i~l~~~~p----~~~~-~~~~~~~~~~~~~---~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~ 79 (357)
T TIGR03539 9 LAPYKAKAAS-HPDGIVDLSVGTP----VDPV-PPLIRAALAAAAD---APGYPQTWGTPELREAIVDWLERRRGVPGLD 79 (357)
T ss_pred HHHHHHHhhh-CCCCeEEccCCCC----CCCC-CHHHHHHHHHHHh---hCCCCcccCCHHHHHHHHHHHHHhcCCCCCC
Confidence 3344444432 3357899999987 3443 6778888877643 3679889999999999999998877876 88
Q ss_pred cCceeeeecCCchhHHHHHHHHHHH-hCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCC
Q 012238 149 EQRVATVQGLSGTGSLRLAAALIER-YFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP 227 (467)
Q Consensus 149 ~~~i~~~~t~ggt~al~l~~~~l~~-~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~ 227 (467)
+++|++ |+|+++++.++ +... +.+||.|++++|+|+.|...++..|++++.++ |++.+ ..
T Consensus 80 ~~~I~i--t~G~~~~i~~~--~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~---------~~~~l----~~-- 140 (357)
T TIGR03539 80 PTAVLP--VIGTKELVAWL--PTLLGLGPGDTVVIPELAYPTYEVGALLAGATPVAAD---------DPTEL----DP-- 140 (357)
T ss_pred cCeEEE--ccChHHHHHHH--HHHHcCCCCCEEEECCCCcHHHHHHHHhcCCEEeccC---------Chhhc----Cc--
Confidence 999999 99999999986 3333 46999999999999999999999999887763 22222 21
Q ss_pred CCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHH--HhcCCeEEEEecCccC
Q 012238 228 GGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF--ATRGMELLVAQSYSKN 305 (467)
Q Consensus 228 ~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~S~SK~ 305 (467)
.+++++++++||||||.+++.+++++|+++|+++|++||+||+|.++.+++. ....+... ....+++++++||||.
T Consensus 141 ~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~--~~~~~~~~~~~~~~~~vi~~~S~SK~ 218 (357)
T TIGR03539 141 VGPDLIWLNSPGNPTGRVLSVDELRAIVAWARERGAVVASDECYLELGWEGR--PVSILDPRVCGGDHTGLLAVHSLSKR 218 (357)
T ss_pred cCccEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCeEEEEecchhhhccCCC--CccceecccCCCccccEEEEeccccc
Confidence 4667888899999999999999999999999999999999999998887531 11111000 0123579999999999
Q ss_pred cccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHH
Q 012238 306 LGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIK 385 (467)
Q Consensus 306 ~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~ 385 (467)
|+++|+|+||++ +++++++. +.+.......+++.+.|.++..+|.+. .+++..++.++
T Consensus 219 ~~~~G~R~G~~i---~~~~~~~~------------~~~~~~~~~~~~~~~~q~~~~~~l~~~-------~~~~~~~~~~~ 276 (357)
T TIGR03539 219 SNLAGYRAGFVA---GDPALVAE------------LLTVRKHAGLMVPAPVQAAMVAALGDD-------GHVAEQKARYA 276 (357)
T ss_pred cCCCceeEEEEe---cCHHHHHH------------HHHHHhhcccCCCHHHHHHHHHHcCCH-------HHHHHHHHHHH
Confidence 999999999995 78888877 555444444567888899888888753 23567788999
Q ss_pred HHHHHHHHHhhhccCCCCCcccccCCcceEEecCC--CHHHHHHHHHcccEEEeCCC----------eEEeccCChhhHH
Q 012238 386 NVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL--NKAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCE 453 (467)
Q Consensus 386 ~~r~~l~~~l~~~~g~~~~~~~~~~~~g~f~~~~l--~~~~~~~ll~~~gI~v~~gg----------Ris~~~~~~~~i~ 453 (467)
++++.+.+.|+ +.| +.+.+|++|+|+|+.+ +...+.+.++++||.+.||. |||++. ++++++
T Consensus 277 ~~~~~~~~~L~-~~g----~~~~~p~~~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~~i~ 350 (357)
T TIGR03539 277 ARRAQLKPALE-KAG----FRIDHSEAGLYLWATRGEDAWDTVDRLAELGILVAPGDFYGPAGSQHVRVALTA-TDERIA 350 (357)
T ss_pred HHHHHHHHHHH-HcC----CCCcCCCccEEEEEECCCCHHHHHHHHHhCCEEECCccccCCCCCCeEEEEecC-CHHHHH
Confidence 99999999998 776 5677889999999865 33334444556799999961 999998 788888
Q ss_pred HHHHHH
Q 012238 454 YLADAI 459 (467)
Q Consensus 454 ~~~~~l 459 (467)
+++++|
T Consensus 351 ~~~~~l 356 (357)
T TIGR03539 351 AAVARL 356 (357)
T ss_pred HHHHhh
Confidence 888776
No 74
>PRK06836 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.9e-41 Score=341.23 Aligned_cols=340 Identities=19% Similarity=0.225 Sum_probs=268.7
Q ss_pred CCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcC--CCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCc
Q 012238 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG--ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 160 (467)
Q Consensus 83 ~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~--~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~gg 160 (467)
++++||+.|.| ..++ ++.+.+++.+..... ....|.+..|.+++|+++++++...++..+++++|++ |+|+
T Consensus 33 ~~~~~l~~g~p----~~~~-~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~--t~G~ 105 (394)
T PRK06836 33 DNVFDFSLGNP----SVPP-PAAVKEALRELAEEEDPGLHGYMPNAGYPEVREAIAESLNRRFGTPLTADHIVM--TCGA 105 (394)
T ss_pred CCeEEecCcCC----CCCC-CHHHHHHHHHHHhcCCcCcccCCCCCCCHHHHHHHHHHHHHHhCCCCCcCcEEE--eCCh
Confidence 46899999976 4443 788888888776432 2367988999999999999999877777888999999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCC
Q 012238 161 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN 240 (467)
Q Consensus 161 t~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~N 240 (467)
++++.++ +...+.+||.|++++|+|..|..+++..|++++.++++ ++++++|++.+++.++ ++++++++++|||
T Consensus 106 ~~al~~~--~~~l~~~gd~Vli~~p~~~~~~~~~~~~g~~v~~v~~~-~~~~~~d~~~l~~~~~---~~~~~v~~~~p~N 179 (394)
T PRK06836 106 AGALNVA--LKAILNPGDEVIVFAPYFVEYRFYVDNHGGKLVVVPTD-TDTFQPDLDALEAAIT---PKTKAVIINSPNN 179 (394)
T ss_pred HHHHHHH--HHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEEecC-CccCcCCHHHHHhhcC---cCceEEEEeCCCC
Confidence 9999987 34446799999999999999999999999999999985 3457899999999996 5678888999999
Q ss_pred CCCCCCCHHHHHHHHHHHHh------cCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccc
Q 012238 241 PTGIDPTPEQWEKIADVIQE------KNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIG 314 (467)
Q Consensus 241 PTG~~~~~~~l~~l~~~~~~------~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG 314 (467)
|||.+++.+++++|+++|++ ||++||+||+|.++.+++. .... +....+++++++||||.|++||+|+|
T Consensus 180 PtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~--~~~~---~~~~~~~~i~~~S~SK~~~~pGlRiG 254 (394)
T PRK06836 180 PTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGA--EVPY---IFKYYDNSIVVYSFSKSLSLPGERIG 254 (394)
T ss_pred CCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCC--CCCC---hHHccCcEEEEecchhhccCcceeeE
Confidence 99999999999999999999 8999999999999987531 1111 12334689999999999999999999
Q ss_pred eEEEecCCHHHHhhhhhhhHHHHHHHHHhhccC-ccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 012238 315 AMNVVCSSSDLAARCCEVAVIQVKSQLKRLARP-MYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFD 393 (467)
Q Consensus 315 ~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~ 393 (467)
|++ .+++..+. ..+...+....+. ...+++.+.|.++..++.+.. .++.++++|+.+.+
T Consensus 255 ~~~---~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~-----------~~~~~~~~r~~l~~ 314 (394)
T PRK06836 255 YIA---VNPEMEDA------DDLVAALVFANRILGFVNAPALMQRVVAKCLDATV-----------DVSIYKRNRDLLYD 314 (394)
T ss_pred EEe---cCHHHhhh------HHHHHHHHHHhhccccccCCHHHHHHHHHHhCChH-----------HHHHHHHHHHHHHH
Confidence 996 55554321 0012222222222 134677788999888887641 24567888999999
Q ss_pred HhhhccCCCCCcccccCCcceEEecCC---CHHHHHHHHHcccEEEeCC------C--eEEeccCChhhHHHHHHHHHHH
Q 012238 394 SLSAKDKSGKDWSFILRQIGMFSFTGL---NKAQSDNMTNKWHVYMTKD------G--RISLAGLSLAKCEYLADAIIDS 462 (467)
Q Consensus 394 ~l~~~~g~~~~~~~~~~~~g~f~~~~l---~~~~~~~ll~~~gI~v~~g------g--Ris~~~~~~~~i~~~~~~l~~~ 462 (467)
.|+ +.| +.+..+++|+|+|+.+ +...+.+.++++||.+.|| | ||+++. +++++++++++|+++
T Consensus 315 ~L~-~~g----~~~~~~~gg~~~~~~~~~~~~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~~~~-~~~~~~~~i~~l~~~ 388 (394)
T PRK06836 315 GLT-ELG----FECVKPQGAFYLFPKSPEEDDVAFCEKAKKHNLLLVPGSGFGCPGYFRLSYCV-DTETIERSLPAFEKL 388 (394)
T ss_pred HHH-hCC----CEeecCCceEEEEEeCCCCCHHHHHHHHHhCCEEEECchhcCCCCeEEEEecC-CHHHHHHHHHHHHHH
Confidence 998 776 5778889999999854 3333334455679999998 2 999985 899999999999999
Q ss_pred HHhc
Q 012238 463 YHNV 466 (467)
Q Consensus 463 l~~~ 466 (467)
++++
T Consensus 389 l~~~ 392 (394)
T PRK06836 389 AKEY 392 (394)
T ss_pred HHHh
Confidence 8764
No 75
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=2.7e-41 Score=335.18 Aligned_cols=335 Identities=17% Similarity=0.174 Sum_probs=258.3
Q ss_pred ccchHHHhhcCCCCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCccccc
Q 012238 70 ILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKE 149 (467)
Q Consensus 70 i~~~~~~~~~~~~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~ 149 (467)
+.++.++... ..++++||+.|.+ ..++ ++.+.+++.+.+.. ...| |..+.++||+++|+++. +++
T Consensus 7 ~~~~~~~~~~-~~~~~~~l~~~~~----~~~~-p~~~~~a~~~~~~~--~~~Y-~~~~~~~lr~~ia~~~~------~~~ 71 (354)
T PRK06358 7 INEIAREKGL-TKNMILDFSANIN----PLGV-PESLKQAITENLDK--LVEY-PDPDYLELRKRIASFEQ------LDL 71 (354)
T ss_pred HHHHHHHhCC-CccceEEecCCCC----CCCC-CHHHHHHHHHHHHh--hhcC-CCccHHHHHHHHHHHhC------CCh
Confidence 3344444432 2235899999876 3333 67888888887643 3668 55678999999999973 358
Q ss_pred CceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCC
Q 012238 150 QRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGG 229 (467)
Q Consensus 150 ~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 229 (467)
++|++ |+|+++++.++. ..+.+ ++|++++|+|+.|...++..|++++.++++++.++.+| +.+++.+. .+
T Consensus 72 ~~i~i--t~Ga~~~l~~~~---~~~~~-~~v~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d-~~~~~~~~---~~ 141 (354)
T PRK06358 72 ENVIL--GNGATELIFNIV---KVTKP-KKVLILAPTFAEYERALKAFDAEIEYAELTEETNFAAN-EIVLEEIK---EE 141 (354)
T ss_pred hhEEE--CCCHHHHHHHHH---HHhCC-CcEEEecCChHHHHHHHHHcCCeeEEEeCccccCCCcc-HHHHHhhc---cC
Confidence 99999 999999999973 33444 68999999999999999999999999998655567888 66666664 45
Q ss_pred cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccC
Q 012238 230 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY 309 (467)
Q Consensus 230 ~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~ 309 (467)
++++++++||||||.+++.+++++|+++|+++|++||+||+|.+|.+++ ...+.....+..+++|+++||||.||+|
T Consensus 142 ~~~v~~~~P~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~---~~~~~~~~~~~~~~vi~~~S~SK~~gl~ 218 (354)
T PRK06358 142 IDLVFLCNPNNPTGQLISKEEMKKILDKCEKRNIYLIIDEAFMDFLEEN---ETISMINYLENFKNLIIIRAFTKFFAIP 218 (354)
T ss_pred CCEEEEeCCCCCCCCccCHHHHHHHHHHHHhcCCEEEEeCcccccCCCc---cchhHHHhccCCCCEEEEEechhhccCc
Confidence 6788889999999999999999999999999999999999999998753 1122222334457999999999999999
Q ss_pred CCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHH
Q 012238 310 AERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQ 389 (467)
Q Consensus 310 G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~ 389 (467)
|+|+||++ ++++.+++. +..... ..+++.+.|.++..+|++. +++++.++.++++|+
T Consensus 219 G~RiG~lv--~~~~~~~~~------------~~~~~~--~~~~~~~~q~~~~~~l~~~-------~~~~~~~~~~~~~r~ 275 (354)
T PRK06358 219 GLRLGYGL--TSNKNLAEK------------LLQMRE--PWSINTFADLAGQTLLDDK-------EYIKKTIQWIKEEKD 275 (354)
T ss_pred chhheeee--cCCHHHHHH------------HHHhCC--CCcchHHHHHHHHHHhccH-------HHHHHHHHHHHHHHH
Confidence 99999995 446777776 555443 3456788899998888754 235678888899999
Q ss_pred HHHHHhhhccCCCCCcccccCCcceEEecCC--CHHHHHHHHHcccEEEeCCC----------eEEeccCChhhHHHHHH
Q 012238 390 KLFDSLSAKDKSGKDWSFILRQIGMFSFTGL--NKAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEYLAD 457 (467)
Q Consensus 390 ~l~~~l~~~~g~~~~~~~~~~~~g~f~~~~l--~~~~~~~ll~~~gI~v~~gg----------Ris~~~~~~~~i~~~~~ 457 (467)
.+.+.|+ +++ + +.+.+++|+ |+|+.+ ..++.+++++ +||.+.+|. ||+++. +++.+++++
T Consensus 276 ~l~~~L~-~~~--~-~~~~~~~g~-f~~~~~~~~~~~~~~l~~-~gI~v~~~~~f~~~~~~~iRls~~~--~~~~~~l~~ 347 (354)
T PRK06358 276 FLYNGLS-EFK--G-IKVYKPSVN-FIFFKLEKPIDLRKELLK-KGILIRSCSNYRGLDENYYRVAVKS--REDNKKLLK 347 (354)
T ss_pred HHHHHHh-cCC--C-cEEcCCcce-EEEEEcCchHHHHHHHHH-CCeEEEECCCCCCCCCCEEEEEeCC--HHHHHHHHH
Confidence 9999998 762 2 566777665 788876 3455666665 699999971 999885 689999999
Q ss_pred HHHHHH
Q 012238 458 AIIDSY 463 (467)
Q Consensus 458 ~l~~~l 463 (467)
+|++++
T Consensus 348 ~l~~~~ 353 (354)
T PRK06358 348 ALEVIL 353 (354)
T ss_pred HHHHHh
Confidence 998765
No 76
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.4e-41 Score=336.46 Aligned_cols=330 Identities=18% Similarity=0.204 Sum_probs=255.5
Q ss_pred ccchHHHhhcCCCCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCccccc
Q 012238 70 ILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKE 149 (467)
Q Consensus 70 i~~~~~~~~~~~~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~ 149 (467)
+.+.+..+.. .+.++|+|++|++ .+++ ++.+.+++.+.+.. ...| |..|.++||+++|+++. +++
T Consensus 18 ~~~~~~~~~~-~~~~~i~l~~~~~----~~~~-~~~~~~~~~~~~~~--~~~Y-~~~~~~~lr~~ia~~~~------~~~ 82 (357)
T PRK14809 18 IEEVARELGL-DPDDLVKLSSNEN----PHGP-SPAAVEAIREAAER--VHSY-PKASHADLTAALADRWD------VSP 82 (357)
T ss_pred HHHHHHHhCC-CccceeEecCCCC----CCCC-CHHHHHHHHHHHhh--hhcC-CCCCHHHHHHHHHHHhC------CCc
Confidence 3344444432 2357999999987 4444 66778888777643 3678 45789999999999973 348
Q ss_pred CceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCC
Q 012238 150 QRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGG 229 (467)
Q Consensus 150 ~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 229 (467)
++|++ |+|++++++++ +...+.|||.|++++|+|..|...++..|+.++.++++.++++.+|.+.+++... +
T Consensus 83 ~~I~i--t~G~~~al~~~--~~~~~~~gd~V~v~~P~y~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~----~ 154 (357)
T PRK14809 83 EQVWL--ANGGDGALDYL--ARAMLDPGDTVLVPDPGFAYYGMSARYHHGEVREYPVSKADDFEQTADTVLDAYD----G 154 (357)
T ss_pred ceEEE--CCCHHHHHHHH--HHHhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEEecccCcCCCcCHHHHHHhhc----C
Confidence 89999 99999999997 3444679999999999999999989999999999998654567778877766542 4
Q ss_pred cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccC
Q 012238 230 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY 309 (467)
Q Consensus 230 ~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~ 309 (467)
++++++++||||||.+++.+++++|+++|++ +++||+||+|.++.++. ..+ ...+..+++++++||||.|++|
T Consensus 155 ~k~i~l~~p~NPTG~~~s~~~~~~l~~~~~~-~~~iI~De~y~~~~~~~-----~~~-~~~~~~~~vi~~~SfSK~~~~~ 227 (357)
T PRK14809 155 ERIVYLTSPHNPTGSEIPLDEVEALAERTDE-ETLVVVDEAYGEFAERP-----SAV-ALVEERDDVAVLRTFSKAYGLA 227 (357)
T ss_pred CcEEEEeCCCCCCCcCCCHHHHHHHHHhCcc-CcEEEEechhhhccCCc-----hhH-HHHhhCCCEEEEecchhHhcCc
Confidence 5688889999999999999999999999875 78999999999987531 122 2234557899999999999999
Q ss_pred CCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHH
Q 012238 310 AERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQ 389 (467)
Q Consensus 310 G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~ 389 (467)
|+|+||++ +++++++. +.+... ..+++.++|.++..+|.+. +++++.++.++++|+
T Consensus 228 GlRiG~~~---~~~~~~~~------------~~~~~~--~~~~~~~~~~~a~~~l~~~-------~~~~~~~~~~~~~r~ 283 (357)
T PRK14809 228 GLRLGYAV---VPEEWADA------------YARVNT--PFAASELACRAGLAALDDD-------EHVERTVETARWARE 283 (357)
T ss_pred chhheeee---cCHHHHHH------------HHHhCC--CCCCCHHHHHHHHHHhCCH-------HHHHHHHHHHHHHHH
Confidence 99999996 78888887 555443 3456778888888888753 235677788888999
Q ss_pred HHHHHhhhccCCCCCcccccCCcceEEecCC-C-HHHHHHHHHcccEEEeCCC--------eEEeccCChhhHHHHHHHH
Q 012238 390 KLFDSLSAKDKSGKDWSFILRQIGMFSFTGL-N-KAQSDNMTNKWHVYMTKDG--------RISLAGLSLAKCEYLADAI 459 (467)
Q Consensus 390 ~l~~~l~~~~g~~~~~~~~~~~~g~f~~~~l-~-~~~~~~ll~~~gI~v~~gg--------Ris~~~~~~~~i~~~~~~l 459 (467)
.+.+.|. ... .+.+|+|+|+.+ + .++.+. ++++||.+.+|. ||+++. ++++++++++|
T Consensus 284 ~l~~~L~-~~~--------~~~~g~f~~~~~~~~~~~~~~-l~~~gv~v~~g~~f~~~~~iRls~~~--~~~~~~~l~~L 351 (357)
T PRK14809 284 YIREELD-APT--------WESAGNFVLAEVGDASAVAEA-AQERGVIVRDCTSFGLPECIRITCGT--REETERAVEVL 351 (357)
T ss_pred HHHHHhc-Ccc--------CCCCCCEEEEECCCHHHHHHH-HHHCCEEEEECccCCCCCeEEEecCC--HHHHHHHHHHH
Confidence 9999887 432 146788999876 3 344555 556799999982 999874 68999999999
Q ss_pred HHHHHh
Q 012238 460 IDSYHN 465 (467)
Q Consensus 460 ~~~l~~ 465 (467)
++++++
T Consensus 352 ~~~l~~ 357 (357)
T PRK14809 352 NEVLAD 357 (357)
T ss_pred HHHhcC
Confidence 998753
No 77
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.1e-41 Score=338.15 Aligned_cols=329 Identities=16% Similarity=0.159 Sum_probs=259.7
Q ss_pred CcEEecCcccCCCCCCCCchHHHHHHHHHHHhc--CCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCch
Q 012238 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLER--GENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (467)
Q Consensus 84 ~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~--~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (467)
..|+|+.|++ .+++ ++.+++++.+.+.. .....| |..|.++||+++|+++...+|..+++++|++ |+|++
T Consensus 27 ~~i~l~~~~~----~~~~-~~~~~~al~~~l~~~~~~~~~Y-~~~g~~~lr~aia~~~~~~~~~~~~~~~I~i--t~G~~ 98 (368)
T PRK03317 27 VPVRLNTNEN----PYPP-SPALVADIAEAVAEAAAGLNRY-PDRDAVALRADLAAYLTAQTGVGLTVENVWA--ANGSN 98 (368)
T ss_pred ceeEecCCCC----CCCC-CHHHHHHHHHHHhhhhhhhccC-CCCchHHHHHHHHHHhhhhccCCCChhhEEE--CCCHH
Confidence 5699999987 5554 78889988887642 123567 5679999999999999888888888999999 99999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCC
Q 012238 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 241 (467)
Q Consensus 162 ~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NP 241 (467)
+++.++ +...+.+||.|+++.|+|..|...++..|.+++.++. ++++++|++.+++.+++ .+++++++++||||
T Consensus 99 ~~l~~~--~~~~~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~--~~~~~~d~~~l~~~~~~--~~~~~i~l~~p~NP 172 (368)
T PRK03317 99 EILQQL--LQAFGGPGRTALGFVPSYSMHPIIARGTHTEWVEGPR--AADFTLDVDAAVAAIAE--HRPDVVFLTSPNNP 172 (368)
T ss_pred HHHHHH--HHHhcCCCCEEEEeCCChHHHHHHHHhcCCeeEEccc--CCCCCCCHHHHHHHHhc--cCCCEEEEeCCCCC
Confidence 999997 4445679999999999999999999999999888876 34678999999999874 35567888999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecC
Q 012238 242 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 321 (467)
Q Consensus 242 TG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~ 321 (467)
||.+++.+++++|++.| +++||+||+|.+|.+++ .. +...+.+..+++++++||||.||++|+|+||++ +
T Consensus 173 tG~~~~~~~l~~l~~~~---~~~lI~DE~y~~~~~~~---~~-~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~~---~ 242 (368)
T PRK03317 173 TGTALPLDDVEAILDAA---PGIVVVDEAYAEFRRSG---TP-SALTLLPEYPRLVVSRTMSKAFAFAGGRLGYLA---A 242 (368)
T ss_pred CCCCCCHHHHHHHHHHC---CceEEEeCCchhhcccC---Cc-CHHHHHHhCCCEEEEEechhhhccchhhhhhhh---C
Confidence 99999999999997766 79999999999987642 11 122333444689999999999999999999995 7
Q ss_pred CHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC
Q 012238 322 SSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKS 401 (467)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~ 401 (467)
++++++. +..... ..+++.+.|.++..+|++.. .+.+.+++++++|+.+.+.|+ ..|
T Consensus 243 ~~~~~~~------------l~~~~~--~~~~s~~~~~a~~~~l~~~~-------~~~~~~~~~~~~~~~l~~~L~-~~g- 299 (368)
T PRK03317 243 APAVVDA------------LRLVRL--PYHLSAVTQAAARAALRHAD-------ELLASVAALRAERDRVVAWLR-ELG- 299 (368)
T ss_pred CHHHHHH------------HHhcCC--CCCCCHHHHHHHHHHhhCHH-------HHHHHHHHHHHHHHHHHHHHH-HCC-
Confidence 8888887 554443 33577888888888887531 123445667888999999998 776
Q ss_pred CCCcccccCCcceEEecCC-CHHHHHHHHHcccEEEeCCC-----eEEeccCChhhHHHHHHHHHHHHH
Q 012238 402 GKDWSFILRQIGMFSFTGL-NKAQSDNMTNKWHVYMTKDG-----RISLAGLSLAKCEYLADAIIDSYH 464 (467)
Q Consensus 402 ~~~~~~~~~~~g~f~~~~l-~~~~~~~ll~~~gI~v~~gg-----Ris~~~~~~~~i~~~~~~l~~~l~ 464 (467)
+.+..++++|++|..+ +.+.+.+.+.++||.+.+.| ||+++ +.+++++++++|+++++
T Consensus 300 ---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~iRi~~~--~~~~~~~~~~~l~~~~~ 363 (368)
T PRK03317 300 ---LRVAPSDANFVLFGRFADRHAVWQGLLDRGVLIRDVGIPGWLRVTIG--TPEENDAFLAALAEVLA 363 (368)
T ss_pred ---CEeCCCCCcEEEEeccCCHHHHHHHHHHCCEEEEeCCCCCeEEEecC--CHHHHHHHHHHHHHHHH
Confidence 5677888998888654 33333444445799998864 99987 46789999999999875
No 78
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=100.00 E-value=5e-41 Score=340.99 Aligned_cols=345 Identities=16% Similarity=0.104 Sum_probs=256.3
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcC----CCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeec
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG----ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQG 157 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~----~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t 157 (467)
++++|+|+.|.|. ..|++.+.+.+++.+.+... ....|++..|.++||+++|+++...+|..+++++|++ |
T Consensus 29 ~~~~i~l~~g~p~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~~~I~i--t 103 (416)
T PRK09440 29 TPGAIMLGGGNPA---HIPEMEDYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWNISPQNIAL--T 103 (416)
T ss_pred CCCceeccCCCCC---ccCCHHHHHHHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEE--c
Confidence 3578999999881 23333467777777766432 2257999999999999999999877788889999999 9
Q ss_pred CCchhHHHHHHHHHHHhC-----CCCEEEE-cCCCCcchHHHHhhCC----CCeEEeeeecC-CCCCCChhhHHHHHHcC
Q 012238 158 LSGTGSLRLAAALIERYF-----PGAKVLI-SSPTWGNHKNIFNDAR----VPWSEYRYYDP-KTVGLDFEGMIADIKAA 226 (467)
Q Consensus 158 ~ggt~al~l~~~~l~~~~-----~gd~Vlv-~~P~y~~~~~~~~~~G----~~~~~v~~~~~-~~~~~d~~~l~~~l~~~ 226 (467)
+|+++++.++.+. .+. +||.|++ ++|+|+.|...++..| ..+..+++.++ ..+++|++.++ +.
T Consensus 104 ~Ga~~al~~~~~~--l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~-- 177 (416)
T PRK09440 104 NGSQSAFFYLFNL--FAGRRADGSLKKILFPLAPEYIGYADAGLEEDLFVSYRPNIELLPEGQFKYHVDFEHLH--ID-- 177 (416)
T ss_pred cChHHHHHHHHHH--HhccccCCCCCeEEEecCCCchhhHHHhhccCceeecccccccccccccccCCCHHHcc--cC--
Confidence 9999999997433 342 6899999 6999999988665433 22223333222 14679998886 22
Q ss_pred CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCc
Q 012238 227 PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL 306 (467)
Q Consensus 227 ~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~ 306 (467)
.+++++++++||||||.+++.+++++|+++|+++|++||+||+|..+... . ..... .....+++|+++||||.
T Consensus 178 -~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~-~--~~~~~--~~~~~~~vI~~~SfSK~- 250 (416)
T PRK09440 178 -EDTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPG-I--IFSEA--TPLWNPNIILCMSLSKL- 250 (416)
T ss_pred -CCceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCCC-c--chhhc--CccccCCeEEEeccccc-
Confidence 56789999999999999999999999999999999999999999764321 0 00000 00114689999999996
Q ss_pred ccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHH-HHHHHHH
Q 012238 307 GLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEME-MMAGRIK 385 (467)
Q Consensus 307 ~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~-~~~~~~~ 385 (467)
++||+|+||++ +++++++. +.........+++.+.|.++..+|.++++. +++. ..++.|+
T Consensus 251 ~~pGlRiG~~i---~~~~l~~~------------~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~----~~~~~~~~~~~~ 311 (416)
T PRK09440 251 GLPGVRCGIVI---ADEEIIEA------------LSNMNGIISLAPGRLGPAIAAEMIESGDLL----RLSETVIRPFYR 311 (416)
T ss_pred CCCcceEEEEe---CCHHHHHH------------HHHHHHHhccCCCcHHHHHHHHHhccchHH----HHHHHHHHHHHH
Confidence 89999999996 78888887 555554445578889999999999887653 3333 3577788
Q ss_pred HHHHHHHHHhhhcc-CCCCCcccccCCcceEEecCC-----CHHHHHHHHHcccEEEeCC---------------C--eE
Q 012238 386 NVRQKLFDSLSAKD-KSGKDWSFILRQIGMFSFTGL-----NKAQSDNMTNKWHVYMTKD---------------G--RI 442 (467)
Q Consensus 386 ~~r~~l~~~l~~~~-g~~~~~~~~~~~~g~f~~~~l-----~~~~~~~ll~~~gI~v~~g---------------g--Ri 442 (467)
++++.+.+.|. +. +. ..+.+..|+||+|+|+.+ +.+.+.+.++++||.+.|| + ||
T Consensus 312 ~r~~~~~~~L~-~~l~~-~~~~~~~p~gg~fiw~~~~~~~~~~~~~~~~l~~~gV~v~pg~~F~~~~~~~~~~~~~~iRi 389 (416)
T PRK09440 312 QKVQLAIALLR-RYLPD-EPCLIHKPEGAIFLWLWFKDLPITTEELYQRLKARGVLVVPGHYFFPGLDEDWPHAHQCIRM 389 (416)
T ss_pred HHHHHHHHHHH-Hhccc-CCeEEecCCCceEEEEECCCCCCCHHHHHHHHHHCCEEEechHhhCCCCccccCCcCceEEE
Confidence 88888888887 43 10 124566889999999854 3333333445679999874 1 99
Q ss_pred EeccCChhhHHHHHHHHHHHHHhc
Q 012238 443 SLAGLSLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 443 s~~~~~~~~i~~~~~~l~~~l~~~ 466 (467)
||+. +++++++++++|++++++.
T Consensus 390 s~~~-~~~~l~~~i~~l~~~~~~~ 412 (416)
T PRK09440 390 NYVQ-DDEEIEKGIAILAEEVEKA 412 (416)
T ss_pred EecC-CHHHHHHHHHHHHHHHHHH
Confidence 9987 7899999999999998753
No 79
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=1.7e-40 Score=329.93 Aligned_cols=338 Identities=14% Similarity=0.141 Sum_probs=256.1
Q ss_pred CCCcccchHHHhhcCCCCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCc
Q 012238 66 PPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNS 145 (467)
Q Consensus 66 ~~~~i~~~~~~~~~~~~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~ 145 (467)
++..+...+.+++. ...++|+|+.|++ ..++ ++.+++++.+.+.. ...| |..+.+++|+++|+++.
T Consensus 4 ~~~~~~~~~~~~~~-~~~~~i~l~~~~~----~~~~-p~~~~~a~~~~~~~--~~~y-~~~~~~~lr~~ia~~~~----- 69 (356)
T PRK08056 4 HGGNIREAATVLGI-SPDQLLDFSANIN----PLGM-PVSLKRAIIDNLDC--AERY-PDVEYRHLHQALARHHQ----- 69 (356)
T ss_pred CCccHHHHHHHhCC-ChhhEEEeccccC----CCCC-CHHHHHHHHHHHHh--cccC-cCccHHHHHHHHHHHhC-----
Confidence 34445455555543 2347899999987 5554 78888988876643 2467 44579999999999963
Q ss_pred ccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHc
Q 012238 146 VLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKA 225 (467)
Q Consensus 146 ~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~ 225 (467)
+++++|++ |+|+++++.++. ..+.+|+ |++++|+|..|...++..|++++.+|+++++++.+| +.+++.+.
T Consensus 70 -~~~~~i~i--t~Ga~~~l~~~~---~~l~~g~-viv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~-~~~~~~~~- 140 (356)
T PRK08056 70 -VPASWILA--GNGETESIFAVV---SGLKPRR-AMIVTPGFAEYRRALQQVGCEIRRYSLREADGWQLT-DAILEALT- 140 (356)
T ss_pred -cChhhEEE--CCCHHHHHHHHH---HHhCCCC-EEEeCCCcHHHHHHHHHcCCeEEEEecccccCCCcc-HHHHHhcc-
Confidence 34889999 999999999873 2346775 788899999999999999999999998655556666 34555554
Q ss_pred CCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccC
Q 012238 226 APGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKN 305 (467)
Q Consensus 226 ~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 305 (467)
++++++++++||||||.+++.+++++|+++|+++|++||+||+|.+|.++. ...+. .....+++++++||||.
T Consensus 141 --~~~k~v~l~~p~NPTG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~----~~~~~-~~~~~~~~i~~~S~SK~ 213 (356)
T PRK08056 141 --PDLDCLFLCTPNNPTGLLPERQLLQAIAERCKSLNIALILDEAFIDFIPDE----TGFIP-QLADNPHLWVLRSLTKF 213 (356)
T ss_pred --CCCCEEEEeCCcCCCCCCCCHHHHHHHHHHHHhcCCEEEEecchhccCCcc----hHHHH-HhccCCCEEEEEechhh
Confidence 567788899999999999999999999999999999999999999997642 11121 22345689999999999
Q ss_pred cccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHH
Q 012238 306 LGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIK 385 (467)
Q Consensus 306 ~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~ 385 (467)
|+++|+|+||++ +.++++++. +++... ..+++.++|.++..+|++..+ +++++++++
T Consensus 214 ~~~~G~RiG~~v--~~~~~~~~~------------l~~~~~--~~~~~~~~~~~a~~~l~~~~~-------~~~~~~~~~ 270 (356)
T PRK08056 214 YAIPGLRLGYLV--NSDDAAVAR------------MRRQQM--PWSINAFAALAGEVILQDRAY-------QQATWQWLA 270 (356)
T ss_pred ccCcchhheeee--cCCHHHHHH------------HHHhCC--CCchhHHHHHHHHHHhCCHHH-------HHHHHHHHH
Confidence 999999999995 446666666 554332 345667788888888865432 467788899
Q ss_pred HHHHHHHHHhhhccCCCCCcccccCCcceEEecCC--C-HHHHHHHHHcccEEEeCCC----------eEEeccCChhhH
Q 012238 386 NVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL--N-KAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKC 452 (467)
Q Consensus 386 ~~r~~l~~~l~~~~g~~~~~~~~~~~~g~f~~~~l--~-~~~~~~ll~~~gI~v~~gg----------Ris~~~~~~~~i 452 (467)
++|+.+.+.|+ +++. +.+.++ +|+|+|+.+ + .++++.+++ +||.+.+|. ||+++. +++.
T Consensus 271 ~~r~~l~~~L~-~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~l~~-~gI~v~~~~~f~~~~~~~iRis~~~--~~~~ 342 (356)
T PRK08056 271 EEGARFYQALC-ALPL---LTVWPG-RANYLFLRCERPDIDLQRALLT-QRILIRSCANYPGLDSRYYRVAIRS--AAEN 342 (356)
T ss_pred HHHHHHHHHHh-cCCC---cEEcCC-CCcEEEEEcCCChHHHHHHHHH-CCeEEEECCCCCCCCCCEEEEEEcC--HHHH
Confidence 99999999998 7631 455555 577888865 2 345666665 699998861 999984 6889
Q ss_pred HHHHHHHHHHHH
Q 012238 453 EYLADAIIDSYH 464 (467)
Q Consensus 453 ~~~~~~l~~~l~ 464 (467)
+.++++|+++++
T Consensus 343 ~~l~~~l~~~~~ 354 (356)
T PRK08056 343 ERLLAALRNVLT 354 (356)
T ss_pred HHHHHHHHHHHc
Confidence 999999988764
No 80
>PLN02672 methionine S-methyltransferase
Probab=100.00 E-value=9.9e-41 Score=358.49 Aligned_cols=344 Identities=11% Similarity=0.085 Sum_probs=264.7
Q ss_pred CCCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCccccc-CceeeeecCC
Q 012238 81 TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKE-QRVATVQGLS 159 (467)
Q Consensus 81 ~~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~-~~i~~~~t~g 159 (467)
.++++|+|++|++ .+++ ++.+++++.+.+... .| ..|.+++|+++++++...+|...++ ++|++ ++|
T Consensus 695 ~g~~vI~LsinE~----d~pp-Pp~V~eAi~eal~~~---~~--s~g~pdlr~aLa~~la~~~Gv~~d~~e~IIv--t~G 762 (1082)
T PLN02672 695 QESSLIHMDVDES----FLPV-PSAVKASIFESFVRQ---NI--SESETDPRPSILQFIKSNYGFPTDSCTEFVY--GDT 762 (1082)
T ss_pred CCCCEEEEeCCCC----CCCC-CHHHHHHHHHHHhhc---CC--CCCChHHHHHHHHHHHHHhCcCCCCCCEEEE--eCC
Confidence 3468999999988 5665 888999998876432 12 3456788999999998878887765 58888 999
Q ss_pred chhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCC
Q 012238 160 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAH 239 (467)
Q Consensus 160 gt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~ 239 (467)
+++++.++ +...+.|||.|+++.|+|+.|...++..|++++.+|+++++++.+|++.+++.+++ .++..+++++||
T Consensus 763 s~elL~ll--l~aLl~pGD~VLVp~PtY~~Y~~~a~~~Ga~vv~Vpl~~e~gf~lD~d~Le~al~~--~~~~~I~L~nPn 838 (1082)
T PLN02672 763 SLALFNKL--VLCCVQEGGTLCFPAGSNGTYVSAAKFLKANFRRIPTKSSDGFKLTAKTLASTLET--VKKPWVYISGPT 838 (1082)
T ss_pred HHHHHHHH--HHHHcCCCCEEEEeCCChHHHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhcc--CCCCEEEEECcC
Confidence 99999886 45557799999999999999999999999999999996556789999999999863 233467788997
Q ss_pred -CCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHH---hc---CCeEEEEecCccCcccCCCc
Q 012238 240 -NPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFA---TR---GMELLVAQSYSKNLGLYAER 312 (467)
Q Consensus 240 -NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~---~~---~~~~i~~~S~SK~~~~~G~R 312 (467)
||||.+++.+++++|+++|++||++||+||+|.++.|++.....+++.... +. ..++++++||||.|+++|||
T Consensus 839 hNPTG~v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpGLR 918 (1082)
T PLN02672 839 INPTGLLYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELLSGGHE 918 (1082)
T ss_pred CCCcCccCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhccHHHH
Confidence 999999999999999999999999999999999998853211111121111 11 23799999999999999999
Q ss_pred cceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHH---hCChhhHHHHHHHHHHHHHHHHHHHH
Q 012238 313 IGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANV---VGNPALFDEWKAEMEMMAGRIKNVRQ 389 (467)
Q Consensus 313 iG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~---L~~~~~~~~~~~~l~~~~~~~~~~r~ 389 (467)
+||++ +.++++++. +..... ...+....|.++..+ +.+. ...|.+++.+.++.++++|+
T Consensus 919 IGylI--ap~~eLi~~------------l~~~~~--~s~~~~~~q~Aaaaalall~~~--~~~~~~~l~e~r~~Lk~rRd 980 (1082)
T PLN02672 919 FGFLA--LNDSVLIDA------------FHSAPG--LSRPHSTLKYTIKKLLGLKNQK--SSDLLDGVAEQKKILKSRAE 980 (1082)
T ss_pred heeEE--eCCHHHHHH------------HHHhhh--hcCCCcHHHHHHHHHHHHHhcc--CcHHHHHHHHHHHHHHHHHH
Confidence 99996 445667777 443322 112222233333332 2210 12356678899999999999
Q ss_pred HHHHHhhhccCCCCCcccccCCcceEEecCC---------------------C-HHHHHHHHHcccEEEeCC---C----
Q 012238 390 KLFDSLSAKDKSGKDWSFILRQIGMFSFTGL---------------------N-KAQSDNMTNKWHVYMTKD---G---- 440 (467)
Q Consensus 390 ~l~~~l~~~~g~~~~~~~~~~~~g~f~~~~l---------------------~-~~~~~~ll~~~gI~v~~g---g---- 440 (467)
++.+.|+ +.| |.+.+|+||||+|+.+ + .+++++++++.||.+.|| |
T Consensus 981 ~L~e~L~-~~G----i~v~~PeGGFfLwl~l~~~l~~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~FG~~g~ 1055 (1082)
T PLN02672 981 RLKETLE-ACG----WDVLEPQGGISMVAKPSAYLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSWTGIPGY 1055 (1082)
T ss_pred HHHHHHH-HCC----CeEecCCcEEEEEEEccccccccccccccccccccCCCHHHHHHHHHHcCCEEEecCcccCCCCe
Confidence 9999999 876 6788999999999842 2 345778888889999997 2
Q ss_pred -eEEeccCChhhHHHHHHHHHHHHH
Q 012238 441 -RISLAGLSLAKCEYLADAIIDSYH 464 (467)
Q Consensus 441 -Ris~~~~~~~~i~~~~~~l~~~l~ 464 (467)
||+|+. +++++++++++|++..+
T Consensus 1056 ~RIsfa~-~~e~LeeALerL~kf~~ 1079 (1082)
T PLN02672 1056 CRFSFAL-EDSEFDRALKAIARFKE 1079 (1082)
T ss_pred EEEEecC-CHHHHHHHHHHHHHHHH
Confidence 999998 88899999999998765
No 81
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.3e-40 Score=331.36 Aligned_cols=316 Identities=19% Similarity=0.192 Sum_probs=247.8
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCch
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (467)
..++|+|+.|++ ..++ ++.+.+++.... ....| |..+.++||+++++++. +++++|++ |+|++
T Consensus 51 ~~~~i~l~~n~~----p~~~-~~~v~~a~~~~~---~~~~Y-p~~~~~~lr~~ia~~~~------~~~~~I~~--t~Ga~ 113 (380)
T PLN03026 51 PEDIVKLDANEN----PYGP-PPEVLEALGNMK---FPYVY-PDPESRRLRAALAEDSG------LESENILV--GCGAD 113 (380)
T ss_pred ccceEEccCCCC----CCCC-CHHHHHHHHhhH---hhccC-CCCCHHHHHHHHHHHhC------cChhhEEE--cCCHH
Confidence 358999999986 4444 566888776531 12446 55678999999999974 34789999 99999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCC
Q 012238 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 241 (467)
Q Consensus 162 ~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NP 241 (467)
+++.++ +...+.+||+|++++|+|..|...++..|++++.++.+ +++++|++.+++.+.. .+++++++++||||
T Consensus 114 ~~i~~~--~~~~~~~gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~~~--~~~~~v~l~~P~NP 187 (380)
T PLN03026 114 ELIDLL--MRCVLDPGDKIIDCPPTFGMYVFDAAVNGAEVIKVPRT--PDFSLDVPRIVEAVET--HKPKLLFLTSPNNP 187 (380)
T ss_pred HHHHHH--HHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeecC--CCCCcCHHHHHHHHhc--cCCcEEEEeCCCCC
Confidence 999997 34446799999999999999999999999999999883 4578999999998842 56789999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecC
Q 012238 242 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 321 (467)
Q Consensus 242 TG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~ 321 (467)
||.+++.+++++|++.+ ++||+||+|.+|.+.. . .. ...+..+++++++||||.||++|+|+||++ +
T Consensus 188 TG~~~~~~~l~~l~~~~----~~vi~DeaY~~~~~~~---~--~~-~~~~~~~~viv~~SfSK~~glaGlRiGy~~---~ 254 (380)
T PLN03026 188 DGSIISDDDLLKILELP----ILVVLDEAYIEFSTQE---S--RM-KWVKKYDNLIVLRTFSKRAGLAGLRVGYGA---F 254 (380)
T ss_pred CCCCCCHHHHHHHHhcC----CEEEEECcchhhcCCc---c--hH-HHHHhCCCEEEEecchHhhcCccccceeee---c
Confidence 99999999999997643 8999999999987542 1 12 223456789999999999999999999995 7
Q ss_pred CHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC
Q 012238 322 SSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKS 401 (467)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~ 401 (467)
++++++. +.+...+ .+.+.++|.++..+|.+.+ ++++.++.++++|+++.+.|+ .++.
T Consensus 255 ~~~~i~~------------l~~~~~~--~~~~~~~q~aa~~aL~~~~-------~~~~~~~~~~~~r~~l~~~L~-~~~~ 312 (380)
T PLN03026 255 PLSIIEY------------LWRAKQP--YNVSVAAEVAACAALSNPK-------YLEDVKNALVEERERLFGLLK-EVPF 312 (380)
T ss_pred CHHHHHH------------HHHhcCC--CCCCHHHHHHHHHHhhCHH-------HHHHHHHHHHHHHHHHHHHHH-HCCC
Confidence 8888877 6655543 3577788889888887642 256778889999999999999 7752
Q ss_pred CCCcccccCCcceEEecCCC-----HHHHHHHHHcccEEEeCC------C--eEEeccCChhhHHHHHHHHHHH
Q 012238 402 GKDWSFILRQIGMFSFTGLN-----KAQSDNMTNKWHVYMTKD------G--RISLAGLSLAKCEYLADAIIDS 462 (467)
Q Consensus 402 ~~~~~~~~~~~g~f~~~~l~-----~~~~~~ll~~~gI~v~~g------g--Ris~~~~~~~~i~~~~~~l~~~ 462 (467)
+. ..+.+++|+|+.+. .++.+.++ ++||.++++ + |||++. ++++++++++|+++
T Consensus 313 ---~~-~~p~~~~f~~~~~~~~~~~~~~~~~l~-~~gI~v~~~~~~~~~~~lRis~~~--~~~~~~l~~al~~~ 379 (380)
T PLN03026 313 ---LE-PYPSDANFILCRVTSGRDAKKLKEDLA-KMGVMVRHYNSKELKGYIRVSVGK--PEHTDALMEALKQL 379 (380)
T ss_pred ---Ce-ECCCCCeEEEEECCCCCCHHHHHHHHH-HCCeEEEECCCCCCCCEEEEecCC--HHHHHHHHHHHHHh
Confidence 23 35667889888552 34455666 579999886 2 999984 57888888888764
No 82
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=7.7e-41 Score=313.61 Aligned_cols=315 Identities=16% Similarity=0.212 Sum_probs=268.6
Q ss_pred CcCCCCcchHHHHHHHHHHHhCCCC--cccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHh-h
Q 012238 120 KEYLPIEGLAAFNKVTAELLFGADN--SVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-D 196 (467)
Q Consensus 120 ~~Y~~~~G~~~lr~aia~~l~~~~~--~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~-~ 196 (467)
..|.+..|++++|+++|+++....| ..++|+++++ ++|+|.+.+.++.+ +..|||.-+||.|+|+++..-++ .
T Consensus 115 a~fqdy~Gl~~frqa~A~Fm~~~r~~~v~fdP~~~Vv--~~G~T~ane~l~fc--LadpgdafLvPtPyY~gfdrdl~~r 190 (471)
T KOG0256|consen 115 AMFQDYHGLPSFRQAVAEFMERARGNRVKFDPERVVV--TNGATSANETLMFC--LADPGDAFLVPTPYYPGFDRDLRWR 190 (471)
T ss_pred hhcccccCchHHHHHHHHHHHHHhCCCCccCccceEE--ecccchhhHHHHHH--hcCCCceeeecCCCCCcccccceec
Confidence 4577889999999999999865433 5678999999 99999999997433 46699999999999999987776 6
Q ss_pred CCCCeEEeeeecCCCCCCChhhHHHHHHcC---CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCC
Q 012238 197 ARVPWSEYRYYDPKTVGLDFEGMIADIKAA---PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQG 273 (467)
Q Consensus 197 ~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~---~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~ 273 (467)
.|+++++|.+...+++.++.+.+|++++++ ..+.+-++++||+||-|++++++++..+++++.++|+++|+||+|.+
T Consensus 191 Tgveivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~ 270 (471)
T KOG0256|consen 191 TGVEIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYAG 270 (471)
T ss_pred cCceEEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhcc
Confidence 899999999988889999999999999764 45778899999999999999999999999999999999999999999
Q ss_pred CCCCCCCCChhHHHHHHh----cCCeEEEEecCccCcccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCcc
Q 012238 274 FASGSLDNDASSVRLFAT----RGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMY 349 (467)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~----~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 349 (467)
.+|+.. ...++..... ..+++.++.|+||.+|+||+|+|.++ +.+++++.. ..++.. +
T Consensus 271 sVF~~~--~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviY--S~ne~Vvsa------------A~kmss--f 332 (471)
T KOG0256|consen 271 SVFDKS--EFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIY--SNNEDVVSA------------ATKMSS--F 332 (471)
T ss_pred cccCcc--CceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEE--ecChHHHHH------------HHHHhh--c
Confidence 999853 3334444433 23689999999999999999999998 778887776 544433 5
Q ss_pred CCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceEEecCC-------C-
Q 012238 350 SNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL-------N- 421 (467)
Q Consensus 350 ~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~~~g~f~~~~l-------~- 421 (467)
..++...|..++..|+|..+.+.| +++..+|++.+..++.+.|+ ++|+ .+.+.++|+|+|+++ +
T Consensus 333 ~~vSs~tQ~~la~LLSD~~f~~~y---l~en~~Rl~~rh~~~~~gLk-~lgI----~cl~s~AGlF~wvDlr~lL~s~tf 404 (471)
T KOG0256|consen 333 GLVSSQTQYLLASLLSDEEFTREY---LRENNKRLRIRHRYIVEGLK-ALGI----PCLKSNAGLFCWVDLRKLLTSLTF 404 (471)
T ss_pred cCCcHHHHHHHHHHhchHHHHHHH---HHHHHHHHHHHHHHHHhhHH-hcCC----ceeecCCeeEEEEEhHHhcCcCCh
Confidence 678889999999999998776544 78999999999999999999 9995 788999999999975 1
Q ss_pred -H--HHHHHHHHcccEEEeCC--------C--eEEeccCChhhHHHHHHHHHHHHH
Q 012238 422 -K--AQSDNMTNKWHVYMTKD--------G--RISLAGLSLAKCEYLADAIIDSYH 464 (467)
Q Consensus 422 -~--~~~~~ll~~~gI~v~~g--------g--Ris~~~~~~~~i~~~~~~l~~~l~ 464 (467)
. +++++++++-++.+.|| | |++|+++.++.++-++++|+..+.
T Consensus 405 e~El~Lw~~i~~~vklnlSpG~s~~C~EpGWFRvcFAn~~~~t~~~am~Ri~~~~~ 460 (471)
T KOG0256|consen 405 EGELELWERILDNVKLNLSPGSSCHCHEPGWFRVCFANMSEETLEVAMRRLKQFLD 460 (471)
T ss_pred HHHHHHHHHHHHhhccccCCCCcceecCCCeEEEEeccCCHHHHHHHHHHHHHHHH
Confidence 2 45788888789999999 4 999999888888889999998875
No 83
>PRK09105 putative aminotransferase; Provisional
Probab=100.00 E-value=1.8e-40 Score=330.82 Aligned_cols=317 Identities=18% Similarity=0.187 Sum_probs=250.2
Q ss_pred CCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchh
Q 012238 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (467)
Q Consensus 83 ~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (467)
++.|+|+.|++ ..++ ++.+.+++.+.+.. ...|++ .+.++||+++++++. +++++|++ |+|+++
T Consensus 43 ~~~i~l~~~~~----~~~~-~~~~~~a~~~~~~~--~~~Y~~-~~~~~Lr~aia~~~~------v~~e~I~i--t~Gs~~ 106 (370)
T PRK09105 43 EGAVFLNANEC----PLGP-SPAARDAAARSAAL--SGRYDL-ELEDDLRTLFAAQEG------LPADHVMA--YAGSSE 106 (370)
T ss_pred CCcEEecCCCC----CCCC-CHHHHHHHHHHHHH--hcCCCC-chHHHHHHHHHHHhC------cChhhEEE--cCChHH
Confidence 57899999987 5554 77888888877643 245854 459999999999863 34889999 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCC
Q 012238 163 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT 242 (467)
Q Consensus 163 al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPT 242 (467)
++.++ +...+.+||+|++++|+|+.|...++..|++++.++++ .++.+|++.+++. . +++++++++||||||
T Consensus 107 ai~~~--~~~l~~~gd~Vli~~P~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~-~---~~~~~v~l~nP~NPT 178 (370)
T PRK09105 107 PLNYA--VLAFTSPTAGLVTADPTYEAGWRAADAQGAPVAKVPLR--ADGAHDVKAMLAA-D---PNAGLIYICNPNNPT 178 (370)
T ss_pred HHHHH--HHHHcCCCCEEEEeCCChHHHHHHHHHcCCeEEEecCC--CCCCCCHHHHHhc-C---CCCCEEEEeCCCCCC
Confidence 99998 44456799999999999999999999999999999984 3577999998775 2 457788899999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecCC
Q 012238 243 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 322 (467)
Q Consensus 243 G~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~ 322 (467)
|.+++.++++++++.++ +++++|+||+|.+|... . +...+.+..+++++++||||.||++|+|+||++ ++
T Consensus 179 G~~~~~~~l~~l~~~~~-~~~~lIvDEaY~~f~~~-----~-s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v---~~ 248 (370)
T PRK09105 179 GTVTPRADIEWLLANKP-AGSVLLVDEAYIHFSDA-----P-SVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAA---AR 248 (370)
T ss_pred CcCcCHHHHHHHHHhCC-CCcEEEEECchHHhccC-----c-chHHHHhhCCCEEEEecccHhhcCCccceeeee---cC
Confidence 99999999999998754 59999999999877532 1 222344456799999999999999999999996 78
Q ss_pred HHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC
Q 012238 323 SDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSG 402 (467)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~~ 402 (467)
+++++. +... ...+++...|.++..+|.++. ++++.+++++++|+.+.+.|+ ++|
T Consensus 249 ~~~i~~------------l~~~---~~~~~~~~~~~aa~~~L~~~~-------~~~~~~~~~~~~r~~l~~~L~-~~g-- 303 (370)
T PRK09105 249 PDLLAK------------LARF---GHNPLPVPAAAAGLASLRDPK-------LVPQRRAENAAVREDTIAWLK-KKG-- 303 (370)
T ss_pred HHHHHH------------HHhc---CCCCcCHHHHHHHHHHHhCHH-------HHHHHHHHHHHHHHHHHHHHH-HCC--
Confidence 888877 5544 234577778888888887642 356777889999999999999 776
Q ss_pred CCcccccCCcceEEecCC--CH-HHHHHHHHcccEEEeCC-----C--eEEeccCChhhHHHHHHHHHHHHH
Q 012238 403 KDWSFILRQIGMFSFTGL--NK-AQSDNMTNKWHVYMTKD-----G--RISLAGLSLAKCEYLADAIIDSYH 464 (467)
Q Consensus 403 ~~~~~~~~~~g~f~~~~l--~~-~~~~~ll~~~gI~v~~g-----g--Ris~~~~~~~~i~~~~~~l~~~l~ 464 (467)
+.+.+++++||+ +++ +. ++.+.|++ +||.+..+ + ||+++. ++++++++++|+++++
T Consensus 304 --~~~~~~~~~f~~-~~~~~~~~~l~~~L~~-~gI~v~~~~~~~~~~~Ris~~~--~~~~~~l~~al~~~~~ 369 (370)
T PRK09105 304 --YKCTPSQANCFM-VDVKRPAKAVADAMAK-QGVFIGRSWPIWPNWVRVTVGS--EEEMAAFRSAFAKVMR 369 (370)
T ss_pred --CCcCCCCCcEEE-EeCCCCHHHHHHHHHH-CCcEEecCCCCCCCeEEEEcCC--HHHHHHHHHHHHHHhh
Confidence 567788888775 543 43 55667766 49998421 2 999985 6789999999988764
No 84
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.6e-40 Score=330.91 Aligned_cols=319 Identities=16% Similarity=0.171 Sum_probs=253.8
Q ss_pred CCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchh
Q 012238 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (467)
Q Consensus 83 ~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (467)
+++|+|+.|.+ ...+ ++.+.+++.+.+.. ..|.|..|.+++|+++|+++. +++++|++ |+|+++
T Consensus 29 ~~~i~l~~n~~----~~~~-~~~v~~a~~~~~~~---~~~~p~~g~~~lr~~ia~~~~------~~~~~i~~--t~G~~~ 92 (359)
T PRK03158 29 EKIVKLASNEN----PYGP-SPKVKEAIAAHLDE---LALYPDGYAPELRTKVAKHLG------VDEEQLLF--GAGLDE 92 (359)
T ss_pred CceEEecCCCC----CCCC-CHHHHHHHHHHHHH---hhcCCCCcHHHHHHHHHHHhC------CCHHHEEE--CCCHHH
Confidence 37899999987 3433 67788888877643 456688899999999999973 23789999 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCC
Q 012238 163 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT 242 (467)
Q Consensus 163 al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPT 242 (467)
++.++ +...+.+||+|++++|+|+.|...++..|++++.+|++ ++++|++.+++.++ ++++++++++|||||
T Consensus 93 ~l~~~--~~~~~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~---~~~~d~~~l~~~~~---~~~~~v~i~~p~NPt 164 (359)
T PRK03158 93 VIQMI--SRALLNPGTNTVMAEPTFSQYRHNAIIEGAEVREVPLK---DGGHDLEAMLKAID---EQTKIVWICNPNNPT 164 (359)
T ss_pred HHHHH--HHHHhCCCCEEEEcCCCHHHHHHHHHHcCCeEEEEecC---CCCcCHHHHHHhcC---CCCCEEEEeCCCCCC
Confidence 99987 33346799999999999999999999999999999984 46799999988876 467788889999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecCC
Q 012238 243 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 322 (467)
Q Consensus 243 G~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~ 322 (467)
|.+++.+++.++++.|+ +|++||+||+|.++.+++. ....+ ...+..+++++++||||.||++|+|+||++ ++
T Consensus 165 G~~~~~~~l~~~~~~~~-~~~~ii~De~y~~~~~~~~--~~~~~-~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v---~~ 237 (359)
T PRK03158 165 GTYVNHEELLSFLESVP-SHVLVVLDEAYYEYVTAED--YPDTL-PLLEKYENLIVLRTFSKAYGLAALRVGYGI---AS 237 (359)
T ss_pred CCCCCHHHHHHHHHhCC-CCcEEEEECchHhhcCCcc--cccHH-HHHHhcCCEEEEEechHhhcCcchhhehhc---CC
Confidence 99999999999988774 6999999999999886531 11122 233455789999999999999999999995 78
Q ss_pred HHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC
Q 012238 323 SDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSG 402 (467)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~~ 402 (467)
+++++. +...... .+++.++|.++..+|++..+ +++.++.++++++.+.+.|+ +.|
T Consensus 238 ~~~~~~------------~~~~~~~--~~~~~~~q~~~~~~l~~~~~-------~~~~~~~~~~~~~~~~~~l~-~~~-- 293 (359)
T PRK03158 238 EELIEK------------LNIARPP--FNTTRIAQYAAIAALEDQAF-------LKECVEKNAEGLEQYYAFCK-EYG-- 293 (359)
T ss_pred HHHHHH------------HHHhcCC--CCCCHHHHHHHHHHhcCHHH-------HHHHHHHHHHHHHHHHHHHH-HCC--
Confidence 888887 5555432 46788899999999976532 44666778888999999998 765
Q ss_pred CCcccccCCcceEEecCC--C-HHHHHHHHHcccEEEeCC---C-----eEEeccCChhhHHHHHHHHHHH
Q 012238 403 KDWSFILRQIGMFSFTGL--N-KAQSDNMTNKWHVYMTKD---G-----RISLAGLSLAKCEYLADAIIDS 462 (467)
Q Consensus 403 ~~~~~~~~~~g~f~~~~l--~-~~~~~~ll~~~gI~v~~g---g-----Ris~~~~~~~~i~~~~~~l~~~ 462 (467)
+.+.++ +|+|+|+.+ + .++++.+++ +||.+.|| | ||+++ +++++++++++|+++
T Consensus 294 --~~~~~~-~g~~i~~~~~~~~~~~~~~l~~-~gv~v~~g~~f~~~~~iRi~~~--~~~~~~~l~~al~~~ 358 (359)
T PRK03158 294 --LFYYPS-QTNFIFVDTGRDANELFEALLK-KGYIVRSGAALGFPTGVRITIG--LKEQNDKIIELLKEL 358 (359)
T ss_pred --CeeCCC-cCcEEEEECCCCHHHHHHHHHH-CCeEEeeCCCCCCCCeEEEecC--CHHHHHHHHHHHHHh
Confidence 455544 567999865 3 345666665 69999997 2 99998 468999999999875
No 85
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.7e-40 Score=330.39 Aligned_cols=324 Identities=18% Similarity=0.196 Sum_probs=252.5
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCch
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (467)
.+++|+|+.|.+ ...+ ++.+.+++.+.... ...|++..|. +||+++++++.- ++++|++ |+|++
T Consensus 35 ~~~~i~l~~~~~----~~~~-~~~~~~al~~~~~~--~~~Y~~~~g~-~lr~~ia~~~~~------~~~~i~~--t~G~~ 98 (371)
T PRK05166 35 VPRIAKLGSNEN----PLGP-SPAVRRAFADIAEL--LRLYPDPQGR-ALREAIAARTGV------PADRIIL--GNGSE 98 (371)
T ss_pred CcceEEcCCCCC----CCCC-CHHHHHHHHHHHHH--hhcCCCCcHH-HHHHHHHHHhCc------CHHHEEE--cCCHH
Confidence 457999999987 3333 67788888775433 3679888884 899999999632 3789999 99999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCC
Q 012238 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 241 (467)
Q Consensus 162 ~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NP 241 (467)
+++.++ +...+.+||.|+++.|+|+.+...++..|++++.++++ .++++|++.+++.++ ++++++++++||||
T Consensus 99 ~~l~~~--~~~~~~~gd~vli~~P~y~~~~~~~~~~g~~~~~v~~~--~~~~~~~~~l~~~~~---~~~~~v~l~~p~NP 171 (371)
T PRK05166 99 DLIAVI--CRAVLRPGDRVVTLYPSFPLHEDYPTMMGARVERVTVT--PDLGFDLDALCAAVA---RAPRMLMFSNPSNP 171 (371)
T ss_pred HHHHHH--HHHhcCCCCEEEEcCCChHHHHHHHHHcCCeEEEeecC--CCCCCCHHHHHHhhh---cCCCEEEEeCCCCC
Confidence 999987 33346799999999999999999999999999999984 357899999999887 45678888999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecC
Q 012238 242 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 321 (467)
Q Consensus 242 TG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~ 321 (467)
||.+++.+++++|+++|++ +++||+||+|.++.++.. .......+.+..+++|+++||||.||++|+|+||++ ++
T Consensus 172 tG~~~~~~~~~~l~~~~~~-~~~ii~De~y~~~~~~~~--~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i--~~ 246 (371)
T PRK05166 172 VGSWLTADQLARVLDATPP-ETLIVVDEAYAEYAAGDD--YPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGL--VS 246 (371)
T ss_pred CCCCCCHHHHHHHHHhCCC-CcEEEEECcHHHhcCCcC--cccHHHHHhhcCCCEEEEeechHhhhcchhheeeee--cC
Confidence 9999999999999999874 889999999999986421 111222222345689999999999999999999985 46
Q ss_pred CHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC
Q 012238 322 SSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKS 401 (467)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~ 401 (467)
++++++. +.+... ..+++.+.|.++..+|.+.+ ++++.++.++++|+.+.+.|+ ..|
T Consensus 247 ~~~l~~~------------~~~~~~--~~~~~~~~q~~~~~~l~~~~-------~~~~~~~~~~~~r~~l~~~L~-~~g- 303 (371)
T PRK05166 247 DPELVGL------------LDRVRT--PFNVNGAAQAAALAALDDEE-------HLAKGVALALAERERLKKELA-EMG- 303 (371)
T ss_pred CHHHHHH------------HHHhcc--CCCCCHHHHHHHHHHhcCHH-------HHHHHHHHHHHHHHHHHHHHH-HCc-
Confidence 7887776 544433 34578888888888887542 256677888899999999999 776
Q ss_pred CCCcccccCCcceEEecCC--C-HHHHHHHHHcccEEEeCCC--------eEEeccCChhhHHHHHHHHHHHH
Q 012238 402 GKDWSFILRQIGMFSFTGL--N-KAQSDNMTNKWHVYMTKDG--------RISLAGLSLAKCEYLADAIIDSY 463 (467)
Q Consensus 402 ~~~~~~~~~~~g~f~~~~l--~-~~~~~~ll~~~gI~v~~gg--------Ris~~~~~~~~i~~~~~~l~~~l 463 (467)
+.+ .+.+|+|+|+++ + .++.+.+++ +||.+.||. ||+++. .++.+++.++|++++
T Consensus 304 ---~~~-~p~~g~fl~~~~~~~~~~l~~~l~~-~gi~v~p~~~~~~~~~iRi~~~~--~~~~~~l~~~l~~i~ 369 (371)
T PRK05166 304 ---YRI-APSRANFLFFDARRPASAVAEALLR-QGVIVKPWKQPGFETFIRVSIGS--PEENDHFVAALDKVL 369 (371)
T ss_pred ---Cee-CCCcCCEEEEeCCCCHHHHHHHHHH-CCeEEecCCCCCCCCeEEEEcCC--HHHHHHHHHHHHHHh
Confidence 454 455678999865 3 345666665 599999872 999995 567888888887764
No 86
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=100.00 E-value=5.1e-40 Score=327.14 Aligned_cols=321 Identities=14% Similarity=0.101 Sum_probs=242.5
Q ss_pred CCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchh
Q 012238 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (467)
Q Consensus 83 ~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (467)
.++|+|+.|++ ..++ ++.+.+++.+.+.. ...|++. +.++||+++|+++. +++++|++ |+|+++
T Consensus 22 ~~~i~l~~~~n----~~~~-~~~~~~a~~~~~~~--~~~Y~~~-~~~~Lr~aia~~~~------v~~~~I~i--t~G~~~ 85 (360)
T PRK07392 22 DAILDFSASIN----PLGP-PESVIAAIQSALSA--LRHYPDP-DYRELRLALAQHHQ------LPPEWILP--GNGAAE 85 (360)
T ss_pred ccEEEeCCcCC----CCCC-CHHHHHHHHHHHHH--hhcCCCc-CHHHHHHHHHHHhC------cChhhEEE--CCCHHH
Confidence 37899999876 4554 77888888876653 3678654 57899999999972 45889999 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCC---CCChhhHHHHHHcCCCCcEEEEeCCCC
Q 012238 163 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTV---GLDFEGMIADIKAAPGGSFILLHGCAH 239 (467)
Q Consensus 163 al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~---~~d~~~l~~~l~~~~~~~~~i~i~~p~ 239 (467)
++.++ +..+.+||+|++++|+|..|...++..|++++.++++++.++ ..|++.+++.. .++++++++|||
T Consensus 86 ~i~~~---~~~l~~g~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~nP~ 158 (360)
T PRK07392 86 LLTWA---GRELAQLRAVYLITPAFGDYRRALRAFGATVKELPLPLDQPSPGLTLRLQTLPPQL----TPNDGLLLNNPH 158 (360)
T ss_pred HHHHH---HHHhCCCCeEEEECCCcHHHHHHHHHcCCeEEEEecccccCCcccccCHHHHHHhc----cCCCEEEEeCCC
Confidence 99987 334568899999999999999999999999999998644333 24555554432 356789999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEe
Q 012238 240 NPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVV 319 (467)
Q Consensus 240 NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v 319 (467)
||||.+++.+++.++ ++++++ +|+||+|.+|.++.. ..+.....+..+++|+++||||.|++||+|+||++
T Consensus 159 NPTG~~~~~~~l~~l---~~~~~~-~IiDE~y~~~~~~~~---~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v-- 229 (360)
T PRK07392 159 NPTGKLWSREAILPL---LEQFAL-VVVDEAFMDFLPPDA---EQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAI-- 229 (360)
T ss_pred CCCCCCcCHHHHHHH---HHHCCE-EEEECchhhhccCcc---ccchHHHhhcCCCEEEEEechhhhcCCchheeeee--
Confidence 999999998866655 667775 666999999987531 11222233455789999999999999999999996
Q ss_pred cCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 012238 320 CSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD 399 (467)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~ 399 (467)
+++++++. +..... ..+++.+.|.++..+|++..+ .+..++.++++|+.+.+.|+ .+
T Consensus 230 -~~~~~~~~------------~~~~~~--~~~~s~~~q~~~~~~l~~~~~-------~~~~~~~~~~~r~~l~~~L~-~~ 286 (360)
T PRK07392 230 -AHPDRLQR------------WQQWRD--PWPVNGLAAAAAIAALADRDF-------QQQTWAWLPPAREALFQGLA-SL 286 (360)
T ss_pred -CCHHHHHH------------HHhhCC--CCCCCHHHHHHHHHHhccHHH-------HHHHHHHHHHHHHHHHHHHH-hC
Confidence 67777776 554432 346788899999999987543 33455678889999999998 76
Q ss_pred CCCCCcccccCCcceEEecCCC---HHHHHHHHHcccEEEeCCC----------eEEeccCChhhHHHHHHHHHHHHH
Q 012238 400 KSGKDWSFILRQIGMFSFTGLN---KAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEYLADAIIDSYH 464 (467)
Q Consensus 400 g~~~~~~~~~~~~g~f~~~~l~---~~~~~~ll~~~gI~v~~gg----------Ris~~~~~~~~i~~~~~~l~~~l~ 464 (467)
+ + +.+. +.+++|+|+++. .++.+++++++||.+.||. ||+++. .++.+++.++|++++.
T Consensus 287 ~--~-~~~~-~~~~~fl~~~~~~~~~~l~~~ll~~~gv~v~pg~~f~~~~~~~iRi~~~~--~~~~~~l~~al~~~~~ 358 (360)
T PRK07392 287 P--G-LTPL-PSAANFLLVQSQGSALQLQEKLLQQHRILIRDCLSFPELGDRYFRVAVRT--EAENQRLLEALAAILA 358 (360)
T ss_pred C--C-cEEC-CCCCCEEEEEcCCCHHHHHHHHHhhCCEEEEeCCCCCCCCCCEEEEEeCC--HHHHHHHHHHHHHHhh
Confidence 3 1 4544 477889998652 3456677777899999881 999986 3556777777777654
No 87
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.9e-40 Score=328.36 Aligned_cols=316 Identities=18% Similarity=0.213 Sum_probs=247.1
Q ss_pred CCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchh
Q 012238 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (467)
Q Consensus 83 ~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (467)
.++|+|+.|++ .+++ ++.+.+++.+.+.... ..| |..|.++||+++|+++. +++++|++ |+|+++
T Consensus 24 ~~~i~l~~~~~----~~~~-~~~~~~a~~~~~~~~~-~~y-~~~~~~~lr~aia~~~~------~~~~~I~i--t~G~~~ 88 (353)
T PRK05387 24 AKLIKLNTNEN----PYPP-SPKVLEAIRAALGDDL-RLY-PDPNADALRQAIAAYYG------LDPEQVFV--GNGSDE 88 (353)
T ss_pred cceeeccCCCC----CCCC-CHHHHHHHHHHhhhhh-hcC-CCCcHHHHHHHHHHHhC------CCHHHEEE--cCCHHH
Confidence 47899999987 4554 7788999888765433 678 45577999999999974 34889999 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCC
Q 012238 163 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT 242 (467)
Q Consensus 163 al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPT 242 (467)
++.++ +...+.+||+|++++|+|+.|...++..|++++.++++ +++++|++.+++ .++++++++|||||
T Consensus 89 al~~~--~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~-------~~~~v~~~~P~NPt 157 (353)
T PRK05387 89 VLAHA--FLAFFNHDRPLLFPDITYSFYPVYAGLYGIPYEEIPLD--DDFSIDVEDYLR-------PNGGIIFPNPNAPT 157 (353)
T ss_pred HHHHH--HHHhcCCCCEEEEeCCCHHHHHHHHHHcCCEEEEeecC--CCCCCCHHHHHh-------cCCEEEEeCCCCCC
Confidence 99998 44457799999999999999999999999999999984 357899998863 23467889999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecCC
Q 012238 243 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 322 (467)
Q Consensus 243 G~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~ 322 (467)
|.+++.+++++|++.++ ++++|+||+|.+|... . .. .+.+..+++++++||||.|+++|+|+||++ ++
T Consensus 158 G~~~~~~~~~~l~~~~~--~~~livDe~y~~~~~~----~--~~-~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~---~~ 225 (353)
T PRK05387 158 GIALPLAEIERILAANP--DSVVVIDEAYVDFGGE----S--AI-PLIDRYPNLLVVQTFSKSRSLAGLRVGFAI---GH 225 (353)
T ss_pred CCCCCHHHHHHHHHhCC--CcEEEEeCcccccCCc----c--hH-HHHhhCCCEEEEEehhHhhcchhhhceeee---cC
Confidence 99999999999987643 8999999999876421 1 11 233445789999999999999999999995 78
Q ss_pred HHHHhhhhhhhHHHHHHHHHhhccCc-cCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC
Q 012238 323 SDLAARCCEVAVIQVKSQLKRLARPM-YSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKS 401 (467)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~ 401 (467)
+++++. ++...... ..+++.+.|.++..+|.+.++ +++.+++++++|+.+.+.|+ ++|
T Consensus 226 ~~~~~~------------l~~~~~~~~~~~~~~~~q~~~~~~l~~~~~-------~~~~~~~~~~~~~~l~~~L~-~~g- 284 (353)
T PRK05387 226 PELIEA------------LNRVKNSFNSYPLDRLAQAGAIAAIEDEAY-------FEETRAKVIATRERLVEELE-ALG- 284 (353)
T ss_pred HHHHHH------------HHHhhccCCCCCcCHHHHHHHHHHhcCHHH-------HHHHHHHHHHHHHHHHHHHH-HCC-
Confidence 888877 55544332 235677888888888875432 45677888999999999999 776
Q ss_pred CCCcccccCCcceEEecCC---CH-HHHHHHHHcccEEEeCCC--------eEEeccCChhhHHHHHHHHHHHHH
Q 012238 402 GKDWSFILRQIGMFSFTGL---NK-AQSDNMTNKWHVYMTKDG--------RISLAGLSLAKCEYLADAIIDSYH 464 (467)
Q Consensus 402 ~~~~~~~~~~~g~f~~~~l---~~-~~~~~ll~~~gI~v~~gg--------Ris~~~~~~~~i~~~~~~l~~~l~ 464 (467)
+.+. +.+++|+|+.+ +. ++.+.+. ++||.+...+ ||+++ +++++++++++|++++.
T Consensus 285 ---~~~~-~~~~~~~~~~~~~~~~~~~~~~l~-~~gi~v~~~~~~~~~~~iRis~~--~~~~~~~~~~~L~~~~~ 352 (353)
T PRK05387 285 ---FEVL-PSKANFVFARHPSHDAAELAAKLR-ERGIIVRHFNKPRIDQFLRITIG--TDEEMEALVDALKEILA 352 (353)
T ss_pred ---CeEC-CCcCcEEEEECCCCCHHHHHHHHH-HCCEEEEECCCCCCCCeEEEEeC--CHHHHHHHHHHHHHHhh
Confidence 4544 45677888865 33 4455654 5699985541 99998 46899999999999875
No 88
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3.5e-40 Score=327.99 Aligned_cols=320 Identities=18% Similarity=0.145 Sum_probs=251.7
Q ss_pred CCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchh
Q 012238 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (467)
Q Consensus 83 ~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (467)
+++|+|+.|++ .+++ ++.+++++.+.+.......|.+ .|.++||+++|+++.... .++|++ |+|+++
T Consensus 26 ~~~i~l~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~Y~~-~~~~~lr~~ia~~~~~~~-----~~~I~~--t~G~~~ 92 (356)
T PRK04870 26 TGMVKLDAMEN----PYRL-PAELRAELGERLAEVALNRYPD-PRAAALKAALRAAMGVPA-----GADVLL--GNGSDE 92 (356)
T ss_pred CCceeCcCCCC----CCCC-CHHHHHHHHHHhhccccccCCC-CCHHHHHHHHHHHhCcCC-----CCcEEE--cCCHHH
Confidence 47999999987 5555 8889999988775433467855 788999999999974321 248888 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCC
Q 012238 163 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT 242 (467)
Q Consensus 163 al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPT 242 (467)
++.++ +...+.+||+|++++|+|..|...++..|++++.++++ +++++|++.+++.+.. .+++++++++|||||
T Consensus 93 ~i~~~--~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~--~~~~~d~~~l~~~~~~--~~~~~v~l~~p~NPt 166 (356)
T PRK04870 93 LIQLL--ALACAKPGATVLAPEPGFVMYRMSAKLAGLEFVGVPLT--ADFTLDLPAMLAAIAE--HRPALVFLAYPNNPT 166 (356)
T ss_pred HHHHH--HHHhcCCCCEEEECCCCHHHHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhc--CCCCEEEEcCCCCCC
Confidence 99997 33346799999999999999999999999999999984 3578999999999864 467788889999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecCC
Q 012238 243 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 322 (467)
Q Consensus 243 G~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~ 322 (467)
|.+++.+++++|+++| ++++|+||+|.+|.+.. + . ......+++++++|||| +++||+|+||++ ++
T Consensus 167 G~~~~~~~~~~i~~~~---~~~ii~De~y~~~~~~~-----~-~-~~~~~~~~vi~~~S~SK-~~~~GlRiG~~i---~~ 232 (356)
T PRK04870 167 GNLFDDADVERIIEAA---PGLVVVDEAYQPFAGDS-----W-L-PRLARFPNLLVMRTVSK-LGLAGLRLGYLA---GH 232 (356)
T ss_pred CCCCCHHHHHHHHHHC---CCEEEEECCchhhcCcc-----h-H-HHHhhCCCEEEEecchh-hhhHHHhhhhhh---CC
Confidence 9999999999999988 77899999999886431 1 1 12244568999999999 899999999995 78
Q ss_pred HHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC
Q 012238 323 SDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSG 402 (467)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~~ 402 (467)
+++++. +..... ..+++.++|.++..++++.+ .+++.+++++++|+.+.+.|+ +++
T Consensus 233 ~~~i~~------------~~~~~~--~~~~~~~~q~~a~~~l~~~~-------~~~~~~~~~~~~~~~l~~~L~-~~~-- 288 (356)
T PRK04870 233 PAWIAE------------LDKVRP--PYNVNVLTQATALFALEHVD-------VLDAQAAQLRAERTRLAAALA-ALP-- 288 (356)
T ss_pred HHHHHH------------HHHccC--CCcCCHHHHHHHHHHHhCHH-------HHHHHHHHHHHHHHHHHHHHH-hCC--
Confidence 888777 555442 23577788888877776532 256777888899999999998 762
Q ss_pred CCcccccCCcceEEecCCC-HHHHHHHHHcccEEEeCCC----------eEEeccCChhhHHHHHHHHHHHH
Q 012238 403 KDWSFILRQIGMFSFTGLN-KAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEYLADAIIDSY 463 (467)
Q Consensus 403 ~~~~~~~~~~g~f~~~~l~-~~~~~~ll~~~gI~v~~gg----------Ris~~~~~~~~i~~~~~~l~~~l 463 (467)
+ +.+. +.+|+|+|+.++ .+.+.+.++++||.+.++. ||+++. .+++++++++|++++
T Consensus 289 ~-~~~~-~~~~~~~~~~~~~~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRis~~~--~~~~~~l~~al~~~~ 356 (356)
T PRK04870 289 G-VTVF-PSAANFILVRVPDAAAVFDGLKTRGVLVKNLSGMHPLLANCLRVTVGT--PEENAQFLAALKAAL 356 (356)
T ss_pred C-cEEC-CCCCeEEEEECCCHHHHHHHHHHCCEEEEECCCCCCCCCCeEEEeCCC--HHHHHHHHHHHHHhC
Confidence 2 4544 456678888763 4444555667899998861 999985 688999999998763
No 89
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=100.00 E-value=5.6e-40 Score=321.32 Aligned_cols=319 Identities=19% Similarity=0.246 Sum_probs=261.0
Q ss_pred CcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhH
Q 012238 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 163 (467)
Q Consensus 84 ~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a 163 (467)
++++|+..++ ..++ ++.+++++.+.+.. .+.| |.....++++++++++.. .++++|++ ++|+++.
T Consensus 23 ~~i~LssNen----P~gp-~~~~~~~~~~~~~~--~~rY-Pd~~~~~l~~a~a~~~~~-----~~~~~V~~--gnGsde~ 87 (356)
T COG0079 23 GIIKLSSNEN----PYGP-PPKVIEAIRAALDK--LNRY-PDPDYRELRAALAEYYGV-----VDPENVLV--GNGSDEL 87 (356)
T ss_pred cceeecCCCC----CCCC-CHHHHHHHHHHHHh--hccC-CCCcHHHHHHHHHHHhCC-----CCcceEEE--cCChHHH
Confidence 6899998765 5554 68888888887653 3678 666899999999999753 23789998 9999999
Q ss_pred HHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCC
Q 012238 164 LRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTG 243 (467)
Q Consensus 164 l~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG 243 (467)
+.++ +...+.+||+|+++.|+|..|...++..|++++.++..+ +.+|++.+.+.+. ++++++++||||||||
T Consensus 88 i~~l--~~~~~~~gd~vl~~~Ptf~~Y~~~a~~~g~~~~~v~~~~---~~~d~~~~~~~~~---~~~~lv~i~nPNNPTG 159 (356)
T COG0079 88 IELL--VRAFVEPGDTVLIPEPTFSMYEIAAQLAGAEVVKVPLKE---FRLDLDAILAAIR---DKTKLVFLCNPNNPTG 159 (356)
T ss_pred HHHH--HHHhhcCCCEEEEcCCChHHHHHHHHhcCCeEEEecccc---cccCHHHHHHhhh---cCCCEEEEeCCCCCCC
Confidence 9998 444577999999999999999999999999999999843 8899999999998 4678999999999999
Q ss_pred CCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecCCH
Q 012238 244 IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSS 323 (467)
Q Consensus 244 ~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~ 323 (467)
..++.++++++++.+.+ +.+||+||+|.+|... ..+ .+....+++++++||||.||++|+|+||++ +++
T Consensus 160 ~~~~~~~l~~l~~~~~~-~~~vVvDEAY~eF~~~------~~~-~l~~~~~nlivlRTfSKa~gLAGlRlGy~i---a~~ 228 (356)
T COG0079 160 TLLPREELRALLEALPE-GGLVVIDEAYIEFSPE------SSL-ELLKYPPNLIVLRTFSKAFGLAGLRVGYAI---ANP 228 (356)
T ss_pred CCCCHHHHHHHHHhCCC-CcEEEEeCchhhcCCc------hhh-hhccCCCCEEEEEecHHhhhcchhceeecc---CCH
Confidence 99999999999999988 9999999999999851 122 233355679999999999999999999985 999
Q ss_pred HHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCC
Q 012238 324 DLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGK 403 (467)
Q Consensus 324 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~~~ 403 (467)
++++. +.+...++ +.+.+++.++..+|.+. +++++.++++++.|+++.+.|+ .+|+
T Consensus 229 ~~i~~------------l~~vr~p~--~v~~~a~~aa~aal~~~-------~~~~~~~~~~~~~r~rl~~~l~-~~~~-- 284 (356)
T COG0079 229 ELIAA------------LNKVRPPF--NVSSPALAAAIAALRDA-------DYLEESVERIREERERLYAALK-ALGL-- 284 (356)
T ss_pred HHHHH------------HHHhcCCC--CCCHHHHHHHHHHcccH-------HHHHHHHHHHHHHHHHHHHHHH-hCCC--
Confidence 99998 87777653 56777888888888876 3377899999999999999999 8763
Q ss_pred CcccccCCcceEEecCCC---H-HHHHHHHHcccEEEeCCC---------eEEeccCChhhHHHHHHHHHHHHHh
Q 012238 404 DWSFILRQIGMFSFTGLN---K-AQSDNMTNKWHVYMTKDG---------RISLAGLSLAKCEYLADAIIDSYHN 465 (467)
Q Consensus 404 ~~~~~~~~~g~f~~~~l~---~-~~~~~ll~~~gI~v~~gg---------Ris~~~~~~~~i~~~~~~l~~~l~~ 465 (467)
..+.+++ +.|+++... . ++.+.|++ +||.++.++ ||++++ +++.++++++|.++++.
T Consensus 285 -~~v~pS~-aNFvlv~~~~~~~~~l~~~L~~-~giivR~~~~~~~~~~~lRitvgt--~een~~ll~AL~~~~~~ 354 (356)
T COG0079 285 -FGVFPSQ-ANFVLVRVPDAEAAALAEALLK-KGILVRDCSSVGLLPGYLRITVGT--PEENDRLLAALREVLKG 354 (356)
T ss_pred -CeecCCC-CcEEEEECCCccHHHHHHHHHH-CCEEEEeCCCCCCCCCeEEEEeCC--HHHHHHHHHHHHHHHhc
Confidence 2255555 557777653 2 34555555 599998871 999985 56779999999998865
No 90
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=7.3e-40 Score=326.76 Aligned_cols=322 Identities=13% Similarity=0.121 Sum_probs=253.3
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCch
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (467)
....|+|+.|++ +.++ ++.+.+++.+.... ...|++. +.++||+++|+++. +++++|++ |+|++
T Consensus 31 ~~~~~~l~~~~~----~~~~-~~~~~~a~~~~~~~--~~~Y~~~-~~~~Lr~~ia~~~~------~~~~~I~i--t~G~~ 94 (369)
T PRK08153 31 RPFRARIGANES----GFGP-SPSVIAAMREAAAE--IWKYGDP-ENHDLRHALAAHHG------VAPENIMV--GEGID 94 (369)
T ss_pred CcceeEecCCCC----CCCC-CHHHHHHHHHHHHH--hhcCCCC-ccHHHHHHHHHHhC------CCHHHEEE--cCCHH
Confidence 335679999987 6665 77888888776542 2568655 58999999999973 34789999 99999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCC
Q 012238 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 241 (467)
Q Consensus 162 ~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NP 241 (467)
+++.++ +...+.|||.|++++|+|+.|...++..|++++.+|+++ .++|++.+++.+.. .+++++++++||||
T Consensus 95 ~~l~~~--~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~vp~~~---~~~~~~~l~~~~~~--~~~~~i~l~~P~NP 167 (369)
T PRK08153 95 GLLGLI--VRLYVEPGDPVVTSLGAYPTFNYHVAGFGGRLVTVPYRD---DREDLDALLDAARR--ENAPLVYLANPDNP 167 (369)
T ss_pred HHHHHH--HHHhcCCCCEEEECCCcchHHHHHHHHcCCeEEEeeCCC---CCCCHHHHHHHhcc--cCCcEEEEeCCCCC
Confidence 999997 333467999999999999999999999999999999842 25899988877653 46678888999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecC
Q 012238 242 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 321 (467)
Q Consensus 242 TG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~ 321 (467)
||.+++.+++++|++.|+ +|++||+||+|.++.+++ ... .+....+++++++||||.||+||+|+||++ +
T Consensus 168 tG~~~~~~~l~~l~~~~~-~~~~lI~DE~y~~~~~~~---~~~---~~~~~~~~~i~~~SfSK~~g~~GlRiG~~v---~ 237 (369)
T PRK08153 168 MGSWHPAADIVAFIEALP-ETTLLVLDEAYCETAPAG---AAP---PIDTDDPNVIRMRTFSKAYGLAGARVGYAI---G 237 (369)
T ss_pred CCCCCCHHHHHHHHHhCC-CCcEEEEeCchhhhcCcc---cch---hhhhcCCCEEEEecchHhccCcchheeeee---c
Confidence 999999999999999887 499999999999988642 111 222335689999999999999999999996 7
Q ss_pred CHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC
Q 012238 322 SSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKS 401 (467)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~ 401 (467)
++++++. +.+.... .+++.+.|.++..+|.++. .+++.++.++++|+.+.+.|+ +.|
T Consensus 238 ~~~~~~~------------l~~~~~~--~~~s~~~q~~~~~~l~~~~-------~~~~~~~~~~~~r~~~~~~L~-~~g- 294 (369)
T PRK08153 238 APGTIKA------------FDKVRNH--FGMNRIAQAAALAALKDQA-------YLAEVVGKIAAARDRIAAIAR-ANG- 294 (369)
T ss_pred CHHHHHH------------HHHhhcC--CCCCHHHHHHHHHHhcCHH-------HHHHHHHHHHHHHHHHHHHHH-HCC-
Confidence 8888887 5555443 3578889999999997542 255678888999999999998 876
Q ss_pred CCCcccccCCcceEEecCCC------HHHHHHHHHcccEEEe-CC-----C--eEEeccCChhhHHHHHHHHHHHHHhc
Q 012238 402 GKDWSFILRQIGMFSFTGLN------KAQSDNMTNKWHVYMT-KD-----G--RISLAGLSLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 402 ~~~~~~~~~~~g~f~~~~l~------~~~~~~ll~~~gI~v~-~g-----g--Ris~~~~~~~~i~~~~~~l~~~l~~~ 466 (467)
+... |.+++|+|+++. .++.+++++ +||.+. |+ + ||+++ +++++++++++|++++..+
T Consensus 295 ---~~~~-p~~~~f~~~~~~~~~~~a~~l~~~l~~-~Gi~v~~p~~~~~~~~iRis~~--~~~~~~~~~~al~~~~~~~ 366 (369)
T PRK08153 295 ---LTPL-PSATNFVAIDCGRDGAFARAVLDGLIA-RDIFVRMPGVAPLDRCIRVSCG--PDEELDLFAEALPEALEAA 366 (369)
T ss_pred ---CccC-CCcCcEEEEECCCCcccHHHHHHHHHH-CCeEEeeCCCCCCCCeEEEecC--CHHHHHHHHHHHHHHHHHh
Confidence 3433 567889998652 233445554 699995 43 2 99998 4789999999999998654
No 91
>PRK06225 aspartate aminotransferase; Provisional
Probab=100.00 E-value=8e-39 Score=320.98 Aligned_cols=332 Identities=15% Similarity=0.182 Sum_probs=257.1
Q ss_pred CCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchh
Q 012238 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (467)
Q Consensus 83 ~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (467)
.+.|+|+.|.+ ..++ ++.+.+++.+.+.......|.+..|.+++|+++++++.. ++++|++ |+|+++
T Consensus 28 ~~~i~l~~~~~----~~~~-~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~------~~~~v~~--~~g~t~ 94 (380)
T PRK06225 28 KEMIWMGQNTN----HLGP-HEEVREAMIRCIEEGEYCKYPPPEGFPELRELILKDLGL------DDDEALI--TAGATE 94 (380)
T ss_pred CCeEEccCCCC----CCCC-CHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHhcCC------CCCcEEE--eCCHHH
Confidence 47999999876 4444 788999998888654446788888999999999999742 3779999 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeec-CCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCC
Q 012238 163 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYD-PKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 241 (467)
Q Consensus 163 al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~-~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NP 241 (467)
+++++ +...+.+||+|++++|+|..+...++..|++++.+++++ +.++.+|++.+++.+. ++++++++++||||
T Consensus 95 al~~~--~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~---~~~~~v~l~~p~Np 169 (380)
T PRK06225 95 SLYLV--MRAFLSPGDNAVTPDPGYLIIDNFASRFGAEVIEVPIYSEECNYKLTPELVKENMD---ENTRLIYLIDPLNP 169 (380)
T ss_pred HHHHH--HHHhcCCCCEEEEcCCCCcchHHHHHHhCceEEeeccccccCCccCCHHHHHhhcC---CCceEEEEeCCCCC
Confidence 99998 333467999999999999999999999999999998743 3357899999999886 56778888899999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecC
Q 012238 242 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 321 (467)
Q Consensus 242 TG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~ 321 (467)
||.+++.+++++|+++|+++|+++|+||+|.+|..+. . ....+ ..++++++.||||.+|++|+|+||++ .
T Consensus 170 tG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~----~-~~~~~--~~~~~i~~~s~SK~~g~~G~RiG~i~---~ 239 (380)
T PRK06225 170 LGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFAREH----T-LAAEY--APEHTVTSYSFSKIFGMAGLRIGAVV---A 239 (380)
T ss_pred CCcCCCHHHHHHHHHHHHHCCcEEEEehhHHHHhccC----C-chhhc--CCCCEEEEeechhhcCCccceeEEEe---c
Confidence 9999999999999999999999999999998876432 1 11111 23678999999999999999999996 6
Q ss_pred CHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-C
Q 012238 322 SSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD-K 400 (467)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~-g 400 (467)
++++++. +...... ..+.+.++|.++...|... .++++..++.++++++.+.+.|+ ++ +
T Consensus 240 ~~~l~~~------------~~~~~~~-~~~~~~~~~~~a~~~l~~~------~~~~~~~~~~~~~~~~~l~~~L~-~~~~ 299 (380)
T PRK06225 240 TPDLIEV------------VKSIVIN-DLGTNVIAQEAAIAGLKVK------DEWIDRIRRTTFKNQKLIKEAVD-EIEG 299 (380)
T ss_pred CHHHHHH------------HHHHHhc-ccCCCHHHHHHHHHHHhcc------hHHHHHHHHHHHHHHHHHHHHHH-hCcC
Confidence 7888777 4443322 3456777888877777542 12245666777777888888888 64 3
Q ss_pred CCCCcccccCCcceEEecCC-----CH-HHHHHHHHcccEEEeCC-------C----eEEeccCChhhHHHHHHHHHHHH
Q 012238 401 SGKDWSFILRQIGMFSFTGL-----NK-AQSDNMTNKWHVYMTKD-------G----RISLAGLSLAKCEYLADAIIDSY 463 (467)
Q Consensus 401 ~~~~~~~~~~~~g~f~~~~l-----~~-~~~~~ll~~~gI~v~~g-------g----Ris~~~~~~~~i~~~~~~l~~~l 463 (467)
. .+.. .+.+|+|+|+.+ +. ++.+++. ++||.+.+| | |++++. +++++++++++|++++
T Consensus 300 ~--~~~~-~~~~g~~~~~~~~~~~~~~~~l~~~l~-~~gi~v~~g~~~~~~~~~~~iR~s~~~-~~e~l~~~~~~l~~~~ 374 (380)
T PRK06225 300 V--FLPV-YPSHGNMMVIDISEAGIDPEDLVEYLL-ERKIFVRQGTYTSKRFGDRYIRVSFSI-PREQVEVFCEEFPDVV 374 (380)
T ss_pred C--cccc-CCCCCeEEEEEcccccCCHHHHHHHHH-HCCEEEcCCcccCcCCCCceEEEEeCC-CHHHHHHHHHHHHHHH
Confidence 1 1222 345566777643 33 3455555 569999886 2 999987 7899999999999999
Q ss_pred HhcC
Q 012238 464 HNVS 467 (467)
Q Consensus 464 ~~~~ 467 (467)
++++
T Consensus 375 ~~~~ 378 (380)
T PRK06225 375 ETLR 378 (380)
T ss_pred HHhh
Confidence 8753
No 92
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=6.7e-39 Score=315.36 Aligned_cols=309 Identities=15% Similarity=0.127 Sum_probs=235.3
Q ss_pred CCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchh
Q 012238 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (467)
Q Consensus 83 ~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (467)
.++|+|+.|++ .+++ ++.+.+++.+.+..+....| |..|.++||+++++++... + +++++|++ |+|+++
T Consensus 19 ~~~i~l~~~~~----~~~~-p~~~~~~~~~~~~~~~~~~Y-~~~~~~~Lr~aia~~~~~~-~--~~~~~i~i--t~Ga~~ 87 (335)
T PRK14808 19 RDRTYLALNEN----PFPF-PEDLVDEVFRRLNSDTLRIY-YDSPDEELIEKILSYLDTD-F--LSKNNVSV--GNGADE 87 (335)
T ss_pred CceeEecCCCC----CCCC-CHHHHHHHHHHhhhhhhhcC-CCCChHHHHHHHHHHhCCC-C--CCcceEEE--cCCHHH
Confidence 48999999987 5655 78888888877654332446 4458999999999998654 2 56899999 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCC
Q 012238 163 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT 242 (467)
Q Consensus 163 al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPT 242 (467)
++.++. ..+ |.|++++|+|+.|...++..|++++.+|+++ ++.++... + .++++++++||||||
T Consensus 88 ~i~~~~---~~~---d~v~v~~P~y~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~----~----~~~~~i~i~nP~NPT 151 (335)
T PRK14808 88 IIYVMM---LMF---DRSVFFPPTYSCYRIFAKAVGAKFLEVPLTK--DLRIPEVN----V----GEGDVVFIPNPNNPT 151 (335)
T ss_pred HHHHHH---HHh---CcEEECCCCHHHHHHHHHHcCCeEEEecCCC--cCCCChhH----c----cCCCEEEEeCCCCCC
Confidence 999973 333 7899999999999999999999999999843 34344221 2 235688899999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecCC
Q 012238 243 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 322 (467)
Q Consensus 243 G~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~ 322 (467)
|.+++.+++++|+ +++++||+||+|.+|... ... ......+++++++||||+|+++|+|+||++ ++
T Consensus 152 G~~~s~~~l~~l~----~~~~~ii~DE~Y~~f~~~----~~~---~~~~~~~~vi~~~S~SK~~~l~GlRvG~~v---~~ 217 (335)
T PRK14808 152 GHVFEREEIERIL----KTGAFVALDEAYYEFHGE----SYV---DLLKKYENLAVIRTFSKAFSLAAQRIGYVV---SS 217 (335)
T ss_pred CCCcCHHHHHHHH----hcCCEEEEECchhhhcCC----chH---HHHHhCCCEEEEEechhhccCcccceEEEE---eC
Confidence 9999999998885 479999999999998521 111 223445689999999999999999999996 77
Q ss_pred HHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC
Q 012238 323 SDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSG 402 (467)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~~ 402 (467)
+++++. +.+... ..+.+.++|.++..++++.+ ...+..+.++++|+.+.+.|+ ++|
T Consensus 218 ~~~~~~------------l~~~~~--~~~~~~~~q~a~~~~l~~~~-------~~~~~~~~~~~~r~~l~~~L~-~~g-- 273 (335)
T PRK14808 218 EKFIDA------------YNRVRL--PFNVSYVSQMFAKVALDHRE-------IFEERTKFIVEERERMKSALR-EMG-- 273 (335)
T ss_pred HHHHHH------------HHHhcC--CCCCCHHHHHHHHHHHhCHH-------HHHHHHHHHHHHHHHHHHHHH-HCC--
Confidence 888887 655443 24567788888888876532 244566677788899999998 776
Q ss_pred CCcccccCCcceEEecCC---CHHHHHHHHHcccEEEeCCC---eEEeccCChhhHHHHHHHHHH
Q 012238 403 KDWSFILRQIGMFSFTGL---NKAQSDNMTNKWHVYMTKDG---RISLAGLSLAKCEYLADAIID 461 (467)
Q Consensus 403 ~~~~~~~~~~g~f~~~~l---~~~~~~~ll~~~gI~v~~gg---Ris~~~~~~~~i~~~~~~l~~ 461 (467)
+++.+++|+ |+|+.+ +.+.+.+.+.++||.++... ||+++. .+++++++++|++
T Consensus 274 --~~~~~~~g~-f~~~~l~~~~~~~~~~~l~~~Gi~V~~~~~~~Risi~~--~~~~~~~~~~l~~ 333 (335)
T PRK14808 274 --YRITDSRGN-FVFIFMEKEEKERLLEHLRAKNIAVRSFREGVRITIGK--REENDMILKELEV 333 (335)
T ss_pred --CEECCCCCe-EEEEeCCCccHHHHHHHHHHCCeEEEECCCCeEEecCC--HHHHHHHHHHHHh
Confidence 566677655 667654 33444445556799998753 999885 5889999999875
No 93
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.4e-38 Score=315.65 Aligned_cols=319 Identities=17% Similarity=0.147 Sum_probs=244.3
Q ss_pred CCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchh
Q 012238 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (467)
Q Consensus 83 ~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (467)
+..++|+.|++ ..++ ++.+.+++.+.+.......|.+ .+.+++|+++|+++. +++++|++ |+|+++
T Consensus 22 ~~~~~l~~~~~----~~~~-p~~~~~a~~~~~~~~~~~~y~~-~~~~~lr~~ia~~~~------~~~~~i~i--t~G~~~ 87 (351)
T PRK14807 22 PYKYKMDANET----PFEL-PEEVIKNIQEIVKSSQVNIYPD-PTAEKLREELARYCS------VVPTNIFV--GNGSDE 87 (351)
T ss_pred CceeEccCCCC----CCCC-CHHHHHHHHHHhhcCcccCCCC-ccHHHHHHHHHHHhC------CCcccEEE--ecCHHH
Confidence 35699999987 5554 7888888888765433466854 457999999999963 23789999 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCC
Q 012238 163 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT 242 (467)
Q Consensus 163 al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPT 242 (467)
++.++ +...+.+||+|+++.|+|..|...++..|++++.++++ +++++|++.+++.++. .+++++++++|||||
T Consensus 88 ~l~~~--~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~~~--~~~k~v~l~~p~NPt 161 (351)
T PRK14807 88 IIHLI--MLAFINKGDVVIYPHPSFAMYSVYSKIAGAVEIPVKLK--EDYTYDVGSFIKVIEK--YQPKLVFLCNPNNPT 161 (351)
T ss_pred HHHHH--HHHhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEeecC--CCCCCCHHHHHHHhhc--cCCCEEEEeCCCCCC
Confidence 99987 33446799999999999999999999999999999984 3578999999999873 367788889999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecCC
Q 012238 243 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 322 (467)
Q Consensus 243 G~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~ 322 (467)
|.+++.+++.+++ ++++.++|+||+|.++. +. ... ...+..+++|+++||||.||+||+|+||++ ++
T Consensus 162 G~~~~~~~l~~l~---~~~~~~~ivDe~y~~~~-~~---~~~---~~~~~~~~vi~~~S~SK~~~~~GlRiG~~v---~~ 228 (351)
T PRK14807 162 GSVIEREDIIKII---EKSRGIVVVDEAYFEFY-GN---TIV---DVINEFENLIVLRTLSKAFGLAGLRVGYAV---AN 228 (351)
T ss_pred CCCCCHHHHHHHH---HhCCCEEEEeCcchhhc-cc---chH---HHhhhCCCEEEEecchHhcccchhceeeee---cC
Confidence 9999999887774 45677899999998874 31 111 223445789999999999999999999996 78
Q ss_pred HHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC
Q 012238 323 SDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSG 402 (467)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~~ 402 (467)
+++++. +...... .+.+.+.|.++..+|.++. +++..+.++++|+.+.+.|+ ++.
T Consensus 229 ~~~~~~------------~~~~~~~--~~~~~~~q~~~~~~l~~~~--------~~~~~~~~~~~r~~l~~~l~-~~~-- 283 (351)
T PRK14807 229 ENILKY------------LNLVKSP--YNINSLSQVIALKVLRTGV--------LKERVNYILNERERLIKELS-KIP-- 283 (351)
T ss_pred HHHHHH------------HHHccCC--CCcCHHHHHHHHHHHhHHH--------HHHHHHHHHHHHHHHHHHHH-hCC--
Confidence 888887 5554433 3467788999988886531 33455567788888999998 652
Q ss_pred CCcccccCCcceEEecCC-CHHHHHHHHHcccEEEeCC-------C--eEEeccCChhhHHHHHHHHHHHH
Q 012238 403 KDWSFILRQIGMFSFTGL-NKAQSDNMTNKWHVYMTKD-------G--RISLAGLSLAKCEYLADAIIDSY 463 (467)
Q Consensus 403 ~~~~~~~~~~g~f~~~~l-~~~~~~~ll~~~gI~v~~g-------g--Ris~~~~~~~~i~~~~~~l~~~l 463 (467)
+ +.+.+ .+|+|+|+.+ +.+.+.+.+.++||.+.++ + ||+++. .++.++++++|++++
T Consensus 284 g-~~~~~-~~~~~~~i~~~~~~~~~~~l~~~gV~v~~~~~~~~~~~~iRis~~~--~~~~~~l~~~l~~~~ 350 (351)
T PRK14807 284 G-IKVYP-SKTNFILVKFKDADYVYQGLLERGILVRDFSKVEGLEGALRITVSS--CEANDYLINGLKELL 350 (351)
T ss_pred C-cEECc-CCccEEEEEcCCHHHHHHHHHHCCEEEEECCCCCCCCCeEEEEcCC--HHHHHHHHHHHHHhh
Confidence 2 56554 4567889876 3444444444569999764 1 999985 578899999998764
No 94
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=8.9e-39 Score=315.02 Aligned_cols=310 Identities=17% Similarity=0.199 Sum_probs=239.5
Q ss_pred CCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchh
Q 012238 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (467)
Q Consensus 83 ~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (467)
.+.|+|+.|++ .+++ ++.+.+++.+.+.......| |..|.+++|+++++++. +++++|++ |+|+++
T Consensus 18 ~~~i~l~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~Y-~~~g~~~lr~~ia~~~~------~~~~~I~~--t~G~~~ 83 (337)
T PRK03967 18 NYRIWLDKNEN----PFDL-PEELKEEIFEELKRVPFNRY-PHITSDPLREAIAEFYG------LDAENIAV--GNGSDE 83 (337)
T ss_pred CceEEecCCCC----CCCC-CHHHHHHHHHHhhcCccccC-CCCCHHHHHHHHHHHhC------cCcceEEE--cCCHHH
Confidence 36799999987 4443 67788888877643223668 56799999999999974 44889999 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCC
Q 012238 163 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT 242 (467)
Q Consensus 163 al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPT 242 (467)
++.++ +..+ +||+|+++.|+|..|...++..|++++.++++ +++++|++.+++.+ .+++++++++|||||
T Consensus 84 ~l~~~---~~~~-~gd~V~v~~P~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~----~~~~~v~~~~P~NPt 153 (337)
T PRK03967 84 LISYL---VKLF-EGKHIVITPPTFGMYSFYAKLNGIPVIDVPLK--EDFTIDGERIAEKA----KNASAVFICSPNNPT 153 (337)
T ss_pred HHHHH---HHHh-CCCeEEEeCCChHHHHHHHHHcCCeEEEeecC--CCCCcCHHHHHHhc----cCCCEEEEeCCCCCC
Confidence 99886 3333 79999999999999999999999999999984 35789999998764 345677789999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecCC
Q 012238 243 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 322 (467)
Q Consensus 243 G~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~ 322 (467)
|.+++.+++.+++ ++++++|+||+|.+|... . ...+....+++|+++||||+|++||+|+||++ ++
T Consensus 154 G~~~~~~~l~~i~----~~~~~ii~De~y~~~~~~----~---~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~iv---~~ 219 (337)
T PRK03967 154 GNLQPEEEILKVL----ETGKPVVLDEAYAEFSGK----S---LIGLIDEYPNLILLRTFSKAFGLAGIRAGYAI---AN 219 (337)
T ss_pred CCCCCHHHHHHHH----hcCCEEEEECchhhhccc----c---hHHHHhhCCCEEEEecchHhhcchhhhheeee---cC
Confidence 9999998777764 379999999999988632 1 11233445789999999999999999999996 77
Q ss_pred HHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC
Q 012238 323 SDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSG 402 (467)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~~ 402 (467)
+++++. +.+.... .+++.++|.++..+|++.++ +.+..+.+.++|+.+.+.|. +..
T Consensus 220 ~~~i~~------------~~~~~~~--~~~~~~~q~~~~~~l~~~~~-------~~~~~~~~~~~r~~l~~~L~-~~~-- 275 (337)
T PRK03967 220 EEIIDA------------LYRIKPP--FSLNILTMKIVRLALDHYDL-------IEERIDYIIKERERVRRELG-EYA-- 275 (337)
T ss_pred HHHHHH------------HHhhcCC--CCCCHHHHHHHHHHHhCHHH-------HHHHHHHHHHHHHHHHHHhc-cCc--
Confidence 888877 6655443 35678899999988876432 33444555677888888887 532
Q ss_pred CCcccccCCcceEEecCCCHHHHHHHHHcccEEEeCCC-------eEEeccCChhhHHHHHHHHHHHHHh
Q 012238 403 KDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKDG-------RISLAGLSLAKCEYLADAIIDSYHN 465 (467)
Q Consensus 403 ~~~~~~~~~~g~f~~~~l~~~~~~~ll~~~gI~v~~gg-------Ris~~~~~~~~i~~~~~~l~~~l~~ 465 (467)
.+.+++|+|+.++ +.+.+++ +||.+++++ ||+++. .++.++++++|+++...
T Consensus 276 ------~~~~~~~~~~~~~--~~~~l~~-~gi~v~~~~~~~~~~~Ri~~~~--~~~~~~l~~~l~~~~~~ 334 (337)
T PRK03967 276 ------YPSDANFLLLKLD--AYDYLLE-NGIVVRKLSGRLEGHIRVTVGK--REENDEFIKALKEIKEG 334 (337)
T ss_pred ------CCCCCcEEEEhHH--HHHHHHH-CCEEEEeCCCCCCCeEEEecCC--HHHHHHHHHHHHHHHHh
Confidence 3567899998763 5566665 599997652 999985 57788888888887654
No 95
>PRK07908 hypothetical protein; Provisional
Probab=100.00 E-value=3.5e-38 Score=312.75 Aligned_cols=316 Identities=16% Similarity=0.133 Sum_probs=244.3
Q ss_pred CCCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCc
Q 012238 81 TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 160 (467)
Q Consensus 81 ~~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~gg 160 (467)
..++.+||+.|++ ..++ ++.+++++.+.+.. ...|.+..|.+++|+++++++. +++++|++ |+|+
T Consensus 20 ~~~~~~~l~~~~~----~~~~-~~~~~~~~~~~~~~--~~~Y~~~~g~~~lr~aia~~~~------~~~~~I~i--t~Ga 84 (349)
T PRK07908 20 AGPGLLDFAVNVR----HDTP-PEWLRERLAARLGD--LAAYPSTEDERRARAAVAARHG------RTPDEVLL--LAGA 84 (349)
T ss_pred CCCCeEEecCCCC----CCCC-CHHHHHHHHHHhhH--hhcCCCccchHHHHHHHHHHhC------cChhhEEE--CCCH
Confidence 3468999999986 4443 78889988887643 3679778899999999999963 34889999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCC
Q 012238 161 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN 240 (467)
Q Consensus 161 t~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~N 240 (467)
++++.++ +. +.+ +.++++.|+|..+...++..|++++.+++++ ++++|++.+ + .++++++++||||
T Consensus 85 ~~al~~~---~~-l~~-~~viv~~P~y~~~~~~~~~~G~~i~~v~~~~--~~~~d~~~l----~---~~~~~i~l~np~N 150 (349)
T PRK07908 85 AEGFALL---AR-LRP-RRAAVVHPSFTEPEAALRAAGIPVHRVVLDP--PFRLDPAAV----P---DDADLVVIGNPTN 150 (349)
T ss_pred HHHHHHH---Hh-cCC-CeEEEeCCCChHHHHHHHHcCCEEEeeccCc--ccCcChhHh----c---cCCCEEEEcCCCC
Confidence 9999987 23 556 5677889999999999999999999999853 377888744 2 3566888899999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEec
Q 012238 241 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC 320 (467)
Q Consensus 241 PTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~ 320 (467)
|||.+++.+++.++ |+ ++.++|+||+|.++..+. ..++.. ...+++++++||||.|+++|+|+||++
T Consensus 151 PTG~~~~~~~l~~l---~~-~~~~iIvDe~y~~~~~~~----~~~l~~--~~~~~~i~i~S~SK~~~l~GlRiG~~~--- 217 (349)
T PRK07908 151 PTSVLHPAEQLLAL---RR-PGRILVVDEAFADAVPGE----PESLAG--DDLPGVLVLRSLTKTWSLAGLRVGYAL--- 217 (349)
T ss_pred CCCCCcCHHHHHHH---Hh-cCCEEEEECcchhhccCC----cccccc--ccCCCEEEEeecccccCCccceeeeee---
Confidence 99999999866655 55 578899999999886432 112211 123579999999999999999999996
Q ss_pred CCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 012238 321 SSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK 400 (467)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g 400 (467)
+++++++. +...... .+.+...+.++..++.+.. .+++++.+++++++|+.+.+.|+ +++
T Consensus 218 ~~~~~~~~------------~~~~~~~--~~~~~~~~~a~~~~~~~~~-----~~~~~~~~~~~~~~r~~l~~~L~-~~~ 277 (349)
T PRK07908 218 GAPDVLAR------------LTRGRAH--WPVGTLQLEAIAACCAPRA-----VAEAAADAARLAADRAEMVAGLR-AVG 277 (349)
T ss_pred cCHHHHHH------------HHhcCCC--CCccHHHHHHHHHHhcccc-----hHHHHHHHHHHHHHHHHHHHHHH-hCC
Confidence 77888877 5554433 2344556666666665322 23467788999999999999998 765
Q ss_pred CCCCcccccCCcceEEecCCC-HHHHHHHHHcccEEEeCCC----------eEEeccCChhhHHHHHHHHHHHHH
Q 012238 401 SGKDWSFILRQIGMFSFTGLN-KAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEYLADAIIDSYH 464 (467)
Q Consensus 401 ~~~~~~~~~~~~g~f~~~~l~-~~~~~~ll~~~gI~v~~gg----------Ris~~~~~~~~i~~~~~~l~~~l~ 464 (467)
+++..|.+|+|+|+.++ .+++.++++++||.+.+|. |||++ +++++++++++|++++.
T Consensus 278 ----~~~~~p~~g~~~~~~~~~~~~~~~~l~~~gI~v~~g~~f~~~~~~~vRis~~--~~~~~~~l~~al~~~~~ 346 (349)
T PRK07908 278 ----ARVVDPAAAPFVLVRVPDAELLRKRLRERGIAVRRGDTFPGLDPDYLRLAVR--PRAEVPVLVQALAEILK 346 (349)
T ss_pred ----cEeccCCCceEEEEECCcHHHHHHHHHhCCEEEEECCCCCCCCCCeEEEEeC--CCccHHHHHHHHHHHHh
Confidence 57777788999999774 4556666677899998861 99996 56899999999998764
No 96
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=4e-38 Score=310.20 Aligned_cols=320 Identities=15% Similarity=0.129 Sum_probs=235.4
Q ss_pred CCCcccchHHHhhcCCCCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCc
Q 012238 66 PPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNS 145 (467)
Q Consensus 66 ~~~~i~~~~~~~~~~~~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~ 145 (467)
++..+..+...++.. ..++|+|+..++ ..+++++.+.. .. ...| |... .+||+++|+++.-.
T Consensus 8 hg~~~~~~~~~~~~~-~~~~i~ls~Nen----p~~~~~~~~~~---~~-----~~~Y-p~~~-~~L~~~ia~~~~~~--- 69 (339)
T PRK06959 8 HGGNLHEAARRYGIP-YDAWLDLSTGIN----PHGYPVPPVPA---DA-----WRRL-PEDD-DGLAACAARYYGAP--- 69 (339)
T ss_pred CCchHHHHHHHcCCC-hhhhceeccCCC----CCCCCCCCCCH---HH-----HHhC-CCch-HHHHHHHHHHhCCC---
Confidence 444444444443322 136899998775 33321122211 11 1347 4444 89999999996442
Q ss_pred ccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHc
Q 012238 146 VLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKA 225 (467)
Q Consensus 146 ~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~ 225 (467)
++++|++ |+|+++++.++ ...+.+|| |+++.|+|+.|...++..|++++.++.++ +.+ .
T Consensus 70 --~~~~I~i--~~Gs~e~i~~l---~~~~~~g~-v~v~~P~y~~y~~~~~~~g~~~~~v~~~~--------~~~----~- 128 (339)
T PRK06959 70 --DAAHVLP--VAGSQAAIRAL---PALLPRGR-VGIAPLAYSEYAPAFARHGHRVVPLDEAA--------DTL----P- 128 (339)
T ss_pred --CcccEEE--CcCHHHHHHHH---HHhcCCCe-EEEcCCCcHHHHHHHHHCCCEEEeecccc--------hhc----c-
Confidence 2579999 99999999875 33456776 89999999999999999999999887631 112 1
Q ss_pred CCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccC
Q 012238 226 APGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKN 305 (467)
Q Consensus 226 ~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 305 (467)
...+++++||||||||.+++.+++++|++.|++++.++|+||+|.+|.+. .++..+. ..+++++++||||.
T Consensus 129 --~~~~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~------~s~~~~~-~~~~vi~l~SfSK~ 199 (339)
T PRK06959 129 --AALTHLIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFADTLPA------ASLAAHT-DRPGLVVLRSVGKF 199 (339)
T ss_pred --ccCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCccCCCc------ccchhcc-CCCCEEEEecChhh
Confidence 23347888999999999999999999999999999999999999998642 1222222 34679999999999
Q ss_pred cccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHH
Q 012238 306 LGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIK 385 (467)
Q Consensus 306 ~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~ 385 (467)
||+||+|+||++ +++++++. +.+.... .+.+.++|.++..+|+++++ .++.++.++
T Consensus 200 ~gl~GlRiGy~v---~~~~li~~------------l~~~~~~--~~vs~~~q~a~~~~L~~~~~-------~~~~~~~~~ 255 (339)
T PRK06959 200 FGLAGVRAGFVL---AAPALLAA------------LRDALGA--WTVSGPARHAVRAAFADAAW-------QAAMRERLA 255 (339)
T ss_pred cCCcchheEEEe---cCHHHHHH------------HHHhcCC--CCCcHHHHHHHHHHhCcHHH-------HHHHHHHHH
Confidence 999999999996 78888887 6665543 34677889999999987543 456789999
Q ss_pred HHHHHHHHHhhhccCCCCCcccccCCcceEEecCC-CH-HHHHHHHHcccEEEeCCC-----eEEeccCChhhHHHHHHH
Q 012238 386 NVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL-NK-AQSDNMTNKWHVYMTKDG-----RISLAGLSLAKCEYLADA 458 (467)
Q Consensus 386 ~~r~~l~~~l~~~~g~~~~~~~~~~~~g~f~~~~l-~~-~~~~~ll~~~gI~v~~gg-----Ris~~~~~~~~i~~~~~~ 458 (467)
++|+.+.+.|+ ++| +++. .+++|+|+++ +. ++.+.++ ++||.++..+ ||+++. +.+++++++++
T Consensus 256 ~~r~~l~~~L~-~~g----~~~~--~~~~f~~~~~~~~~~l~~~l~-~~GI~vr~~~~~~~lRisi~~-~~~e~~~l~~a 326 (339)
T PRK06959 256 ADGARLAALLR-AHG----FAVH--ATPLFSWTDDPRAAALHAALA-RRGIWTRYFAPPPSVRFGLPA-DEAEWQRLEDA 326 (339)
T ss_pred HHHHHHHHHHH-HCC----CCcc--CcceEEEEeCCCHHHHHHHHH-hCCeEEEECCCCCeEEEECCC-CHHHHHHHHHH
Confidence 99999999999 876 3443 3578999876 33 4455555 5699998753 999965 66899999999
Q ss_pred HHHHHHhc
Q 012238 459 IIDSYHNV 466 (467)
Q Consensus 459 l~~~l~~~ 466 (467)
|+++++.+
T Consensus 327 l~~~~~~~ 334 (339)
T PRK06959 327 LAECVPTL 334 (339)
T ss_pred HHHHHHHH
Confidence 99887654
No 97
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3.2e-38 Score=314.17 Aligned_cols=296 Identities=20% Similarity=0.239 Sum_probs=231.5
Q ss_pred CcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCC-CEEEEcCCCCcchHHHHhhCC
Q 012238 120 KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPG-AKVLISSPTWGNHKNIFNDAR 198 (467)
Q Consensus 120 ~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~g-d~Vlv~~P~y~~~~~~~~~~G 198 (467)
..|+ ..+.++||+++|+++. +++++|++ |+|+++++.++ +...+.+| |+|++++|+|..|...++..|
T Consensus 54 ~~Y~-~~~~~~lr~~ia~~~~------~~~~~I~~--t~G~~~~l~~~--~~~~~~~g~~~vlv~~p~y~~~~~~~~~~g 122 (364)
T PRK04781 54 RRYP-DPQPPGLRSALAALYG------CAPEQLLI--GRGSDEAIDLL--VRALCVPGRDAVLVTPPVFGMYAVCARLQN 122 (364)
T ss_pred ccCC-CCCHHHHHHHHHHHhC------cChHHEEE--eCCHHHHHHHH--HHHhcCCCCCeEEEcCCChHHHHHHHHHcC
Confidence 5674 4457999999999973 34889999 99999999997 33345688 799999999999999999999
Q ss_pred CCeEEeeeec-CCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCC
Q 012238 199 VPWSEYRYYD-PKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASG 277 (467)
Q Consensus 199 ~~~~~v~~~~-~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~ 277 (467)
++++.+|+++ ++++.+|++.+++.+.. ++++++++++||||||.+++.+++++|++.|+ ++++||+||+|.+|.+.
T Consensus 123 ~~~~~v~~~~~~~~~~~d~~~l~~~~~~--~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~-~~~~iI~Deay~~f~~~ 199 (364)
T PRK04781 123 APLVEVPLVDGADGFHADVPAIVAAALA--SNAKLVFLCSPSNPAGSAIALDQIERALQALQ-GKALVVVDEAYGEFSDV 199 (364)
T ss_pred CEEEEEecCCCccCCCcCHHHHHHHHhc--cCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCC-CCcEEEEeCcchhhcCC
Confidence 9999999843 34566899988766543 56788888999999999999999999999885 47899999999999753
Q ss_pred CCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHH
Q 012238 278 SLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGA 357 (467)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 357 (467)
. +...+.+..+++++++||||+||+||+|+||++ +++++++. +.+.... .+.+.+.|
T Consensus 200 ~------~~~~~~~~~~~vi~~~SfSK~~gl~GlRvGy~v---~~~~l~~~------------l~~~~~~--~~~~~~~~ 256 (364)
T PRK04781 200 P------SAVGLLARYDNLAVLRTLSKAHALAAARIGSLI---ANAELIAV------------LRRCQAP--YPVPTPCA 256 (364)
T ss_pred c------chHHHHhhCCCEEEEecChhhcccccceeeeee---CCHHHHHH------------HHhccCC--CCCCHHHH
Confidence 1 112333556789999999999999999999996 88888887 6666543 35677788
Q ss_pred HHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceEEecCC-CHHHHHHHHHcccEEE
Q 012238 358 RIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL-NKAQSDNMTNKWHVYM 436 (467)
Q Consensus 358 ~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~~~g~f~~~~l-~~~~~~~ll~~~gI~v 436 (467)
.++..+|.++.+ . ...+..+.++++|+.+.+.|+ .++ + +....|.+|+|+|+.+ +.+.+.+.++++||.+
T Consensus 257 ~~a~~~l~~~~~----~-~~~~~~~~~~~~r~~l~~~L~-~~~--~-~~~~~p~~g~f~~~~~~~~~~~~~~l~~~gI~v 327 (364)
T PRK04781 257 ALAEQALSAPAL----A-VTARRVAEVRAERERLHAALA-QLP--G-VRRVYPSQGNFLLVRFDDAEAAFQALLAAGVVV 327 (364)
T ss_pred HHHHHHHhcccH----H-HHHHHHHHHHHHHHHHHHHHH-hCC--C-CCeECCCCCcEEEEEcCCHHHHHHHHHHCCeEE
Confidence 888888877532 1 233455578899999999998 763 1 4334567789999976 3444444555679999
Q ss_pred eCCC---------eEEeccCChhhHHHHHHHHHHHH
Q 012238 437 TKDG---------RISLAGLSLAKCEYLADAIIDSY 463 (467)
Q Consensus 437 ~~gg---------Ris~~~~~~~~i~~~~~~l~~~l 463 (467)
.+|. ||+++. ++++++++++|+++.
T Consensus 328 ~~~~~~~~~~~~~Ris~~~--~~~~~~l~~al~~~~ 361 (364)
T PRK04781 328 RDQRAAPRLSDALRITLGT--PEQNDRVLAALQRTQ 361 (364)
T ss_pred eeCCCCCCCCCeEEEeCCC--HHHHHHHHHHHHHHH
Confidence 8861 999985 688999999998764
No 98
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=2.7e-38 Score=311.03 Aligned_cols=285 Identities=14% Similarity=0.112 Sum_probs=217.2
Q ss_pred CcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCC
Q 012238 120 KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARV 199 (467)
Q Consensus 120 ~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~ 199 (467)
..| |..-..+||+++|+++... +++|++ |+|+++++.++. ..+.+| .|++++|+|+.|...++..|+
T Consensus 35 ~~Y-p~~~~~~lr~~ia~~~~~~------~~~I~i--t~Gs~~~l~~~~---~~~~~~-~vv~~~P~y~~y~~~~~~~G~ 101 (332)
T PRK06425 35 SIY-PEISYTDIEDQIKIYTQGL------KIKVLI--GPGLTHFIYRLL---SYINVG-NIIIVEPNFNEYKGYAFTHGI 101 (332)
T ss_pred ccC-cCcCHHHHHHHHHHHhCCC------cceEEE--CCCHHHHHHHHH---HHhCCC-cEEEeCCChHHHHHHHHHcCC
Confidence 457 6666889999999996543 788999 999999999973 345676 577779999999999999999
Q ss_pred CeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCC
Q 012238 200 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 279 (467)
Q Consensus 200 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~ 279 (467)
+++.+|+++ +++|.+.++ . .+++++++||||||||.+++.+++++|+++|+++|++||+||+|.+|.++.
T Consensus 102 ~v~~vp~~~---~~~~~~~l~----~--~~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~~- 171 (332)
T PRK06425 102 RISALPFNL---INNNPEILN----N--YNFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFVPNR- 171 (332)
T ss_pred eEEEEeCCc---ccCcHHHHh----h--cCCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchhcccccc-
Confidence 999999842 345654443 2 356688889999999999999999999999999999999999999998642
Q ss_pred CCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHH
Q 012238 280 DNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARI 359 (467)
Q Consensus 280 ~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 359 (467)
..+...+....+++|+++||||.|++||+|+||++ +++++++. +.+...+. ..+...+
T Consensus 172 ---~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiGy~v---~~~~li~~------------l~~~~~~~--~~~~~~~-- 229 (332)
T PRK06425 172 ---AEEDVLLNRSYGNVIIGRSLTKILGIPSLRIGYIA---TDDYNMKI------------SRKITEPW--SVCDPAI-- 229 (332)
T ss_pred ---chhHHHHhccCCCEEEEeecHHhcCCchhhheeee---cCHHHHHH------------HHHcCCCC--ccCHHHH--
Confidence 11233344445789999999999999999999996 78888887 55543332 2222222
Q ss_pred HHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceEEecCC-C-HHHHHHHHHcccEEEe
Q 012238 360 VANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL-N-KAQSDNMTNKWHVYMT 437 (467)
Q Consensus 360 ~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~~~g~f~~~~l-~-~~~~~~ll~~~gI~v~ 437 (467)
.++.... +..++++.++.++++|+.+.+.|+ ++| +.+..+.+|+|+|+.+ + .++.+.+++ +||.+.
T Consensus 230 --~~l~~~~----~~~~~~~~~~~~~~~r~~l~~~L~-~~g----~~~~~~~~g~f~~~~~~~~~~~~~~l~~-~gi~v~ 297 (332)
T PRK06425 230 --DFIRSID----LDYVAKHSLDIMENERSYLINNLE-AMG----FRAAGDPSANFITFMIPDAHDFYSYLLK-NGILVR 297 (332)
T ss_pred --HHHHHhh----hHHHHHHHHHHHHHHHHHHHHHHH-HCC----CEECCCCCceEEEEEcCCHHHHHHHHHH-CCeEEE
Confidence 2222211 133456788999999999999999 876 4555444567888865 3 455666665 699998
Q ss_pred CC--------C--eEEeccCChhhHHHHHHHHHHHH
Q 012238 438 KD--------G--RISLAGLSLAKCEYLADAIIDSY 463 (467)
Q Consensus 438 ~g--------g--Ris~~~~~~~~i~~~~~~l~~~l 463 (467)
+| + ||+++. ++++++++++|++++
T Consensus 298 ~~~~f~~~~~~~iRis~~~--~~~~~~l~~al~~~~ 331 (332)
T PRK06425 298 LLDDYECLGEQYIRIAIRR--RSFNIKLVNALRNFL 331 (332)
T ss_pred ECCCCCCCCCCEEEEEeCC--HHHHHHHHHHHHHHh
Confidence 86 1 999985 589999999999875
No 99
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=7.9e-38 Score=312.53 Aligned_cols=323 Identities=15% Similarity=0.137 Sum_probs=251.8
Q ss_pred CCCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCc
Q 012238 81 TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 160 (467)
Q Consensus 81 ~~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~gg 160 (467)
...++|+|+.|.+ ...+ ++.+.+++.+.... ...|++. +..++|+++|+++.. ++++|++ |+|+
T Consensus 30 ~~~~~i~l~~~~~----~~~~-~~~~~~a~~~~~~~--~~~y~~~-~~~~lr~~ia~~~~~------~~~~i~~--t~G~ 93 (367)
T PRK02731 30 GIADIIKLASNEN----PLGP-SPKAIEAIRAAADE--LHRYPDG-SGFELKAALAEKFGV------DPERIIL--GNGS 93 (367)
T ss_pred CCCceEEecCCCC----CCCC-CHHHHHHHHHHHHh--hcCCCCC-cHHHHHHHHHHHhCc------CHHHEEE--cCCH
Confidence 3457999999976 2333 66788888877643 3678554 457999999999732 3789999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCC
Q 012238 161 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN 240 (467)
Q Consensus 161 t~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~N 240 (467)
++++.++ +...+.+||+|+++.|+|..|...++..|++++.++.+ ++++|++.+++.++ ++++++++++|||
T Consensus 94 ~~~l~~~--~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~---~~~~~~~~l~~~~~---~~~~~v~l~~p~n 165 (367)
T PRK02731 94 DEILELL--ARAYLGPGDEVIYSEHGFAVYPIAAQAVGAKPVEVPAK---DYGHDLDAMLAAVT---PRTRLVFIANPNN 165 (367)
T ss_pred HHHHHHH--HHHhcCCCCEEEEecCCHHHHHHHHHHcCCeEEEeccc---CCCCCHHHHHHHhC---CCCcEEEEeCCCC
Confidence 9999887 33346799999999999999998889999999998872 46799999999886 4677888899999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEec
Q 012238 241 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC 320 (467)
Q Consensus 241 PTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~ 320 (467)
|||.+++.+++++|++.++ +|+++|+||+|.++.+++. ...++ ...+..+++++++||||.||++|+|+||++
T Consensus 166 ptG~~~~~~~l~~l~~~~~-~~~~li~De~y~~~~~~~~--~~~~~-~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~--- 238 (367)
T PRK02731 166 PTGTYLPAEEVERFLAGVP-PDVLVVLDEAYAEYVRRKD--YEDGL-ELVAKFPNVVVTRTFSKAYGLAGLRVGYGI--- 238 (367)
T ss_pred CCCcCCCHHHHHHHHHhCC-CCcEEEEECcHHHhccCcC--cccHH-HHHhhcCCEEEEeeehHhhcCcccceeeee---
Confidence 9999999999999998875 6999999999998887532 12223 233455789999999999999999999996
Q ss_pred CCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 012238 321 SSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK 400 (467)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g 400 (467)
+++++++. +...... .+.+.++|.++..+|++.. .+++.++.++++++.+.+.|+ +.|
T Consensus 239 ~~~~~~~~------------l~~~~~~--~~~~~~~~~~a~~~l~~~~-------~~~~~~~~~~~~~~~l~~~L~-~~g 296 (367)
T PRK02731 239 APPEIIDA------------LNRVRQP--FNVNSLALAAAVAALDDDA-------FVEKSRALNAEGMAWLTEFLA-ELG 296 (367)
T ss_pred CCHHHHHH------------HHHccCC--CCCCHHHHHHHHHHhCCHH-------HHHHHHHHHHHHHHHHHHHHH-HCC
Confidence 77888777 5554433 3456788889888887542 256778888899999999998 776
Q ss_pred CCCCcccccCCcceEEecCC----CH-HHHHHHHHcccEEEeCC------C--eEEeccCChhhHHHHHHHHHHHHH
Q 012238 401 SGKDWSFILRQIGMFSFTGL----NK-AQSDNMTNKWHVYMTKD------G--RISLAGLSLAKCEYLADAIIDSYH 464 (467)
Q Consensus 401 ~~~~~~~~~~~~g~f~~~~l----~~-~~~~~ll~~~gI~v~~g------g--Ris~~~~~~~~i~~~~~~l~~~l~ 464 (467)
+.+.+ .+|+|+|+.+ +. ++.+.+. ++||.+.++ + ||+++ +.+++++++++|+++++
T Consensus 297 ----~~~~~-~~g~~~~i~~~~~~~~~~~~~~L~-~~gI~v~~~~~~~~~~~iRis~~--~~~e~~~l~~aL~~~~~ 365 (367)
T PRK02731 297 ----LEYIP-SVGNFILVDFDDGKDAAEAYQALL-KRGVIVRPVAGYGLPNALRITIG--TEEENRRFLAALKEFLA 365 (367)
T ss_pred ----CccCC-CCceEEEEECCCCCCHHHHHHHHH-HCCEEEEeCCCCCCCCeEEEecC--CHHHHHHHHHHHHHHHh
Confidence 45554 4567888865 33 4455555 569999986 2 99997 46889999999998875
No 100
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2e-38 Score=314.20 Aligned_cols=311 Identities=18% Similarity=0.204 Sum_probs=237.8
Q ss_pred CcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhH
Q 012238 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 163 (467)
Q Consensus 84 ~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a 163 (467)
..|+|+.+++ .+++ ++.+ .......| |.....+++++++++++ +++++|++ |+|++++
T Consensus 29 ~~~~l~~Nen----p~~~-~~~~--------~~~~~~~Y-p~~~~~~l~~~~a~~~g------~~~~~I~~--~~Gs~e~ 86 (351)
T PRK01688 29 GDVWLNANEY----PTAV-EFQL--------TQQTLNRY-PECQPKAVIENYAAYAG------VKPEQVLV--SRGADEG 86 (351)
T ss_pred CceEecCCCC----CCCC-Chhh--------cccccccC-CCCChHHHHHHHHHHhC------CCHHHEEE--cCCHHHH
Confidence 4699998765 4443 3332 11123567 55556899999999953 24889999 9999999
Q ss_pred HHHHHHHHHHhCCC-CEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCC
Q 012238 164 LRLAAALIERYFPG-AKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT 242 (467)
Q Consensus 164 l~l~~~~l~~~~~g-d~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPT 242 (467)
+.++ +...+.+| |+|+++.|+|..|...++..|++++.++++ +++++|++.+++.+. ++++++++||||||
T Consensus 87 i~~~--~~~~~~~g~~~vli~~P~y~~y~~~~~~~G~~~~~v~~~--~~~~~d~~~l~~~~~----~~~lv~l~nPnNPT 158 (351)
T PRK01688 87 IELL--IRAFCEPGKDAILYCPPTYGMYSVSAETIGVEIRTVPTL--DNWQLDLPAIADNLD----GVKVVYVCSPNNPT 158 (351)
T ss_pred HHHH--HHHhcCCCCCEEEEcCCCHHHHHHHHHHcCCEEEEeecC--CCCCCCHHHHHHhcc----CCcEEEEeCCCCCC
Confidence 9998 33345687 899999999999999999999999999984 358899999988763 56788899999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecCC
Q 012238 243 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 322 (467)
Q Consensus 243 G~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~ 322 (467)
|.+++.+++++|++.|++ +.+||+||+|.+|... . +...+....+++++++||||.||++|+|+||++ ++
T Consensus 159 G~~~~~~~l~~l~~~~~~-~~~vivDEay~~f~~~---~---s~~~~~~~~~n~iv~rSfSK~~glaGlRiGy~i---~~ 228 (351)
T PRK01688 159 GNLINPQDLRTLLELTRG-KAIVVADEAYIEFCPQ---A---SLAGWLAEYPHLVILRTLSKAFALAGLRCGFTL---AN 228 (351)
T ss_pred CCCCCHHHHHHHHHhCCC-CcEEEEECchhhcCCC---C---ChHHHHhhCCCEEEEecchHhhcCHHHHHhHHh---CC
Confidence 999999999999999876 6889999999998732 1 122334556799999999999999999999995 78
Q ss_pred HHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC
Q 012238 323 SDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSG 402 (467)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~~ 402 (467)
+++++. +.+...+ .+++.+.|.++..+|.+.. .+.+++.++.++++|+++.+.|+ .++.
T Consensus 229 ~~~i~~------------l~~~~~~--~~v~~~~~~~a~~~L~~~~-----~~~~~~~~~~~~~~r~~l~~~L~-~~~~- 287 (351)
T PRK01688 229 EEVINL------------LLKVIAP--YPLSTPVADIAAQALSPQG-----IAAMRERVAEINANRQWLIAALK-EIPC- 287 (351)
T ss_pred HHHHHH------------HHhccCC--CCCCHHHHHHHHHHHhcch-----HHHHHHHHHHHHHHHHHHHHHHH-hCCC-
Confidence 888887 6655443 3466677778877887532 12356777888899999999998 7741
Q ss_pred CCcccccCCcceEEecCCC--HHHHHHHHHcccEEEeCC----C-----eEEeccCChhhHHHHHHHHH
Q 012238 403 KDWSFILRQIGMFSFTGLN--KAQSDNMTNKWHVYMTKD----G-----RISLAGLSLAKCEYLADAII 460 (467)
Q Consensus 403 ~~~~~~~~~~g~f~~~~l~--~~~~~~ll~~~gI~v~~g----g-----Ris~~~~~~~~i~~~~~~l~ 460 (467)
+....|.+++|+|+.+. .++.+.|+ ++||.++++ | |||++. ++++++++++|+
T Consensus 288 --~~~~~ps~~nfi~~~~~~~~~l~~~L~-~~gi~vr~~~~~~~~~~~iRis~~~--~~e~~~l~~al~ 351 (351)
T PRK01688 288 --VEQVFDSETNYILARFTASSAVFKSLW-DQGIILRDQNKQPGLSNCLRITIGT--REECQRVIDALR 351 (351)
T ss_pred --CCeECCCCCcEEEEEcCCHHHHHHHHH-HCCeEEEECCCcCCCCCeEEEeCCC--HHHHHHHHHhhC
Confidence 44344566779988763 34455666 469999864 2 999984 689999988873
No 101
>PRK03321 putative aminotransferase; Provisional
Probab=100.00 E-value=4.9e-38 Score=312.20 Aligned_cols=322 Identities=16% Similarity=0.162 Sum_probs=248.4
Q ss_pred CcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhH
Q 012238 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 163 (467)
Q Consensus 84 ~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a 163 (467)
++|+|+.|.+ ..++ ++.+.+++.+.+.. ...| |..|.+++|+++|+++. +++++|++ |+|++++
T Consensus 23 ~~i~l~~~~~----~~~~-~~~~~~a~~~~~~~--~~~y-~~~g~~~lr~~ia~~~~------~~~~~I~~--~~G~~~~ 86 (352)
T PRK03321 23 GAIKLSSNET----PFGP-LPSVRAAIARAAAG--VNRY-PDMGAVELRAALAEHLG------VPPEHVAV--GCGSVAL 86 (352)
T ss_pred cceeccCCCC----CCCC-CHHHHHHHHHHHHh--cCcC-CCCcHHHHHHHHHHHhC------cCHHHEEE--CCCHHHH
Confidence 6899999987 4444 66889988877643 2557 56899999999999975 33789999 9999999
Q ss_pred HHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCC
Q 012238 164 LRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTG 243 (467)
Q Consensus 164 l~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG 243 (467)
+.++ +...+.+||+|+++.|+|..|...++..|++++.+++++ ++++|++.+++.++ .+++++++++||||||
T Consensus 87 l~~~--~~~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~l~~~~~---~~~~~v~l~~p~NPtG 159 (352)
T PRK03321 87 CQQL--VQATAGPGDEVIFAWRSFEAYPILVQVAGATPVQVPLTP--DHTHDLDAMAAAIT---DRTRLIFVCNPNNPTG 159 (352)
T ss_pred HHHH--HHHhcCCCCEEEeCCCCHHHHHHHHHHcCCEEEEccCCC--CCCCCHHHHHHhhc---cCCCEEEEeCCCCCcC
Confidence 9887 333467999999999999999999999999999999842 36799999999886 4667888899999999
Q ss_pred CCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecCCH
Q 012238 244 IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSS 323 (467)
Q Consensus 244 ~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~ 323 (467)
.+++.+++.++++.+ ++|++||+||+|.++.+++. ...++ ......+++++++||||.||+||+|+||++ +++
T Consensus 160 ~~~~~~~l~~l~~~~-~~~~~ii~De~y~~~~~~~~--~~~~~-~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v---~~~ 232 (352)
T PRK03321 160 TVVTPAELARFLDAV-PADVLVVLDEAYVEYVRDDD--VPDGL-ELVRDHPNVVVLRTFSKAYGLAGLRVGYAV---GHP 232 (352)
T ss_pred CCcCHHHHHHHHHhC-CCCeEEEEechHHHhccCcC--CCcHH-HHHhhCCCEEEEecchHHhhhHHHhhhhhc---CCH
Confidence 999999999998865 47999999999999987531 11222 223445789999999999999999999996 778
Q ss_pred HHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCC
Q 012238 324 DLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGK 403 (467)
Q Consensus 324 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~~~ 403 (467)
++++. +.+... ..+.+.++|.++..+|...+ . ..+..+++.++|+.+.+.|+ +.|
T Consensus 233 ~~~~~------------~~~~~~--~~~~s~~~q~~a~~~l~~~~---~----~~~~~~~~~~~r~~~~~~L~-~~~--- 287 (352)
T PRK03321 233 EVIAA------------LRKVAV--PFSVNSLAQAAAIASLAAED---E----LLERVDAVVAERDRVRAALR-AAG--- 287 (352)
T ss_pred HHHHH------------HHHhcC--CCCCCHHHHHHHHHHhcCHH---H----HHHHHHHHHHHHHHHHHHHH-HCC---
Confidence 88887 554432 34677888888877776421 1 22333445566778889998 766
Q ss_pred CcccccCCcceEEecCC--CH-HHHHHHHHcccEEEeCCC----eEEeccCChhhHHHHHHHHHHHHHh
Q 012238 404 DWSFILRQIGMFSFTGL--NK-AQSDNMTNKWHVYMTKDG----RISLAGLSLAKCEYLADAIIDSYHN 465 (467)
Q Consensus 404 ~~~~~~~~~g~f~~~~l--~~-~~~~~ll~~~gI~v~~gg----Ris~~~~~~~~i~~~~~~l~~~l~~ 465 (467)
+.+.+ .+|+|+|+.+ +. ++.+.+ +++||.+.+.+ ||+++ ..+++++++++|++++..
T Consensus 288 -~~~~~-~~g~~i~i~l~~~~~~~~~~l-~~~gI~v~~~~~~~iRi~~~--~~~~~~~~~~al~~~~~~ 351 (352)
T PRK03321 288 -WTVPP-SQANFVWLPLGERTADFAAAA-AEAGVVVRPFAGEGVRVTIG--APEENDAFLRAARAWRAG 351 (352)
T ss_pred -CccCC-CCCCEEEEeCCCCHHHHHHHH-HHCCEEEEccCCCcEEEeeC--CHHHHHHHHHHHHHHhcc
Confidence 45444 4578899865 23 345554 56799999864 99987 468999999999998754
No 102
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=100.00 E-value=2.2e-37 Score=304.20 Aligned_cols=300 Identities=15% Similarity=0.161 Sum_probs=225.9
Q ss_pred CcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhH
Q 012238 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 163 (467)
Q Consensus 84 ~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a 163 (467)
++|+|+.+++ ..++.++.+.+ ..+ ..| |. +..+||+++++++. +++|++ |+|++++
T Consensus 21 ~~i~l~~ne~----p~~~~~~~~~~---~~~-----~~y-p~-~~~~Lr~~ia~~~~--------~~~I~i--t~Gs~~a 76 (330)
T PRK05664 21 DWLDLSTGIA----PWPWPVPAIPA---DAW-----ARL-PE-TDDGLEAAARAYYG--------APQLLP--VAGSQAA 76 (330)
T ss_pred HheeecCCcC----CCCCCCcccCH---HHH-----HhC-CC-ChHHHHHHHHHHhC--------CCCEEE--CcCHHHH
Confidence 6799999865 22221222221 111 236 32 34899999999963 368999 9999999
Q ss_pred HHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCC
Q 012238 164 LRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTG 243 (467)
Q Consensus 164 l~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG 243 (467)
+.++ + .+.+||+|++++|+|+.|...++..|++++.+|++ .+++.++ +++++++++||||||
T Consensus 77 l~~~--~--~~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~v~~~----------~~~~~~~----~~~~v~l~nP~NPTG 138 (330)
T PRK05664 77 IQAL--P--RLRAPGRVGVLSPCYAEHAHAWRRAGHQVRELDEA----------EVEAALD----SLDVLVVVNPNNPTG 138 (330)
T ss_pred HHHH--H--HccCCCEEEEcCCChHHHHHHHHHcCCeEEEechh----------hHhhhhc----CCCEEEEeCCcCCCC
Confidence 9986 2 35799999999999999999999999999998762 3444443 345778899999999
Q ss_pred CCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecCCH
Q 012238 244 IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSS 323 (467)
Q Consensus 244 ~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~ 323 (467)
.+++.+++++|+++|+++|++||+||+|.++... .++..+ ...+++++++||||.||+||+|+||++ +++
T Consensus 139 ~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~~~~------~s~~~~-~~~~~vi~~~SfSK~~gl~GlRiG~~v---~~~ 208 (330)
T PRK05664 139 RRFDPARLLAWHARLAARGGWLVVDEAFMDNTPQ------HSLAAC-AHRPGLIVLRSFGKFFGLAGARLGFVL---AEP 208 (330)
T ss_pred CccCHHHHHHHHHHHHhcCCEEEEECCcccCCCc------cccccc-ccCCCEEEEeeccccccCCCcceEEEE---eCH
Confidence 9999999999999999999999999999877521 122222 234689999999999999999999996 788
Q ss_pred HHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCC
Q 012238 324 DLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGK 403 (467)
Q Consensus 324 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~~~ 403 (467)
++++. +...... .+.+...|.++..+|.+..+ .+..++.++++|+.+.+.|+ ++|+
T Consensus 209 ~l~~~------------~~~~~~~--~~~~~~~~~~~~~~L~~~~~-------~~~~~~~~~~~r~~l~~~L~-~~~~-- 264 (330)
T PRK05664 209 ALLRA------------LAELLGP--WTVSGPTRWLAQAALADTPW-------QRRQRERLLAASQRLAALLR-RHGL-- 264 (330)
T ss_pred HHHHH------------HHHhcCC--CCCCHHHHHHHHHHHhChHH-------HHHHHHHHHHHHHHHHHHHH-HCCC--
Confidence 88887 6555443 24567788888888876432 45678889999999999999 7762
Q ss_pred CcccccCCcc--eEEecCC-CHHHHHHHHHcccEEEeCCC-----eEEeccCChhhHHHHHHHHHHHHHh
Q 012238 404 DWSFILRQIG--MFSFTGL-NKAQSDNMTNKWHVYMTKDG-----RISLAGLSLAKCEYLADAIIDSYHN 465 (467)
Q Consensus 404 ~~~~~~~~~g--~f~~~~l-~~~~~~~ll~~~gI~v~~gg-----Ris~~~~~~~~i~~~~~~l~~~l~~ 465 (467)
. +.+| +|+|+.. +.+.+.+.+.++||.+...+ ||+++. +.++++++.++|+++.++
T Consensus 265 --~---~~~~~~~f~~~~~~~~~~~~~~l~~~gi~v~~f~~~~~iRis~~~-~~~~~~~l~~al~~~~~~ 328 (330)
T PRK05664 265 --T---PAGGCALFQWVRTEDAAALHEFLARRGILTRLFEQPASLRFGLPA-DEADWARLDQALLAYRKE 328 (330)
T ss_pred --c---ccCCcceEEEEecCCHHHHHHHHHHCCeEEEECCCCCeEEEECCC-CHHHHHHHHHHHHHHHhh
Confidence 2 3344 7888865 44444444556799997643 999996 567899999999887654
No 103
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.6e-37 Score=308.32 Aligned_cols=312 Identities=16% Similarity=0.143 Sum_probs=236.9
Q ss_pred CCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchh
Q 012238 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (467)
Q Consensus 83 ~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (467)
.+.|+|+.+++ ..++ ++.+ . .. . ...|+ ..+.++||+++|+++. +++++|++ |+|+++
T Consensus 31 ~~~~~l~~ne~----~~~~-~~~~-----~-~~-~-~~~Yp-~~~~~~Lr~aia~~~~------~~~~~I~i--t~Gs~~ 88 (354)
T PRK04635 31 RGDIWINANES----PFNN-EYKL-----D-LA-R-LNRYP-ECQPPELINAYSAYAG------VAPEQILT--SRGADE 88 (354)
T ss_pred CCcEEeeCCCC----CCCC-Chhh-----h-hH-H-hccCC-CCCHHHHHHHHHHHhC------cCHHHEEE--eCCHHH
Confidence 35699998876 4443 3322 1 11 1 26684 4568999999999863 34889999 999999
Q ss_pred HHHHHHHHHHHhCCC-CEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCC
Q 012238 163 SLRLAAALIERYFPG-AKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 241 (467)
Q Consensus 163 al~l~~~~l~~~~~g-d~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NP 241 (467)
++.++ +...+.+| |+|+++.|+|..|...++..|++++.+|++ .++.+|++.+++ + +++++++++|||||
T Consensus 89 ~i~~~--~~~~~~~g~d~vlv~~P~y~~y~~~~~~~g~~v~~v~~~--~~~~~~~~~l~~-~----~~~~li~i~nP~NP 159 (354)
T PRK04635 89 AIELL--IRAFCEPGQDSIACFGPTYGMYAISAETFNVGVKALPLT--ADYQLPLDYIEQ-L----DGAKLVFICNPNNP 159 (354)
T ss_pred HHHHH--HHHhcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEEecC--CCCCCCHHHHHh-c----cCCCEEEEeCCCCC
Confidence 99998 33345688 899999999999999999999999999984 357789988863 2 36778899999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecC
Q 012238 242 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 321 (467)
Q Consensus 242 TG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~ 321 (467)
||.+++.+++++|++.|+ +++||+||+|.+|... . +...+....+++++++||||.||++|+|+||++ +
T Consensus 160 TG~~~~~~~l~~l~~~~~--~~~vivDeay~~~~~~---~---s~~~~~~~~~~~iv~~S~SK~~~l~GlRlG~~i---~ 228 (354)
T PRK04635 160 TGTVIDRADIEQLIEMTP--DAIVVVDEAYIEFCPE---Y---SVADLLASYPNLVVLRTLSKAFALAGARCGFTL---A 228 (354)
T ss_pred CCccCCHHHHHHHHHhCC--CcEEEEeCchHhhccC---c---chHHHHhhCCCEEEEechHHHhhhhHHHHhhhh---C
Confidence 999999999999998876 4999999999988632 1 222333455789999999999999999999995 7
Q ss_pred CHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC
Q 012238 322 SSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKS 401 (467)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~ 401 (467)
++++++. +...... .+.+...|.++..+|.+... +.+++.++.++++|+.+.+.|+ +++.
T Consensus 229 ~~~~~~~------------l~~~~~~--~~~~~~~~~~a~~~l~~~~~-----~~~~~~~~~~~~~r~~l~~~L~-~~~~ 288 (354)
T PRK04635 229 NEELIEI------------LMRVIAP--YPVPLPVSEIATQALSEAGL-----ARMKFQVLDLNAQGARLQAALS-MYGG 288 (354)
T ss_pred CHHHHHH------------HHhhcCC--CCCCHHHHHHHHHHHhcccH-----HHHHHHHHHHHHHHHHHHHHHH-hCCC
Confidence 8888877 5544332 34566677788777765432 2356677888999999999999 7652
Q ss_pred CCCcccccCCcceEEecCC-CHHHHHHHHHcccEEEeCC------C--eEEeccCChhhHHHHHHHHHHH
Q 012238 402 GKDWSFILRQIGMFSFTGL-NKAQSDNMTNKWHVYMTKD------G--RISLAGLSLAKCEYLADAIIDS 462 (467)
Q Consensus 402 ~~~~~~~~~~~g~f~~~~l-~~~~~~~ll~~~gI~v~~g------g--Ris~~~~~~~~i~~~~~~l~~~ 462 (467)
+.+.+++ |.|+|+.+ +.+.+.++++++||.++.+ + |||++. .+++++++++|++-
T Consensus 289 ---~~~~~~~-g~f~~~~~~~~~~~~~~l~~~gv~v~~~~~~~~~~~lRis~~~--~e~~~~l~~al~~~ 352 (354)
T PRK04635 289 ---AKVLEGN-GNYVLAKFDDVDAVFKALWDAGIVARAYKDPRLANCIRFSFSN--RAETDKLIGLIRNQ 352 (354)
T ss_pred ---ceECCCC-CcEEEEECCCHHHHHHHHHHCCEEEEECCCCCCCCeEEEEeCC--HHHHHHHHHHHHHh
Confidence 4566665 56888766 4444555666789998754 2 999984 68999999998764
No 104
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=100.00 E-value=7.7e-37 Score=302.95 Aligned_cols=315 Identities=16% Similarity=0.196 Sum_probs=246.7
Q ss_pred CCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchh
Q 012238 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (467)
Q Consensus 83 ~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (467)
.++|||++|.+ +.++ ++.+.+++.+.... ...|.+..+ +++|+++|+++. +++++|++ |+|+++
T Consensus 19 ~~~i~l~~~~~----~~~~-~~~~~~a~~~~~~~--~~~y~~~~~-~~lr~~ia~~~~------~~~~~i~~--~~G~~~ 82 (346)
T TIGR01141 19 KEVIKLNSNEN----PFGP-PPKAKEALRAEADK--LHRYPDPDP-AELKQALADYYG------VDPEQILL--GNGSDE 82 (346)
T ss_pred CceEEccCCCC----CCCC-CHHHHHHHHHhHHH--hhcCCCCCH-HHHHHHHHHHhC------cChHHEEE--cCCHHH
Confidence 47999999987 5554 77788988887642 267866555 899999999975 23789999 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCC
Q 012238 163 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT 242 (467)
Q Consensus 163 al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPT 242 (467)
++..+ +...+.+||+|++++|+|+.|...++..|++++.+++++ ++.+|++.+++.+. ++++++++++|+|||
T Consensus 83 ~l~~~--~~~l~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~~--~~~~d~~~l~~~~~---~~~~~v~l~~p~Npt 155 (346)
T TIGR01141 83 IIELL--IRAFLEPGDAVLVPPPTYSMYEISAKIHGAEVVKVPLDE--DGQLDLEDILVAID---DKPKLVFLCSPNNPT 155 (346)
T ss_pred HHHHH--HHHhcCCCCEEEEcCCCHHHHHHHHHHcCCeEEEeccCC--CCCCCHHHHHHhcC---CCCCEEEEeCCCCCC
Confidence 99887 344467999999999999999989999999999999843 36799999999765 567788889999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecCC
Q 012238 243 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 322 (467)
Q Consensus 243 G~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~ 322 (467)
|.+++.+++.++++.++ +|+++|+|++|.++..+. . .. ......+++++++|+||.+|++|+|+||++ .+
T Consensus 156 G~~~~~~~~~~l~~~~~-~~~~ii~D~~y~~~~~~~---~--~~-~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~---~~ 225 (346)
T TIGR01141 156 GNLLSRSDIEAVLERTP-EDALVVVDEAYGEFSGEP---S--TL-PLLAEYPNLIVLRTLSKAFGLAGLRIGYAI---AN 225 (346)
T ss_pred CCCCCHHHHHHHHHhCC-CCcEEEEECchhhhcCCc---c--HH-HHHhhCCCEEEEehhhHhhhchhhhceeee---cC
Confidence 99999999999988887 799999999999776431 1 12 222334578999999999999999999995 67
Q ss_pred HHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-CC
Q 012238 323 SDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD-KS 401 (467)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~-g~ 401 (467)
+++++. ++..... .+.+.++|.++..++++.. ++++.+++++++++.+.+.|+ ++ |
T Consensus 226 ~~~~~~------------~~~~~~~--~~~~~~~~~~~~~~l~~~~-------~~~~~~~~~~~~~~~l~~~L~-~~~g- 282 (346)
T TIGR01141 226 AEIIDA------------LNKVRAP--FNLSRLAQAAAIAALRDDD-------FIEKTVEEINAERERLYDGLK-KLPG- 282 (346)
T ss_pred HHHHHH------------HHhccCC--CCCCHHHHHHHHHHhCCHH-------HHHHHHHHHHHHHHHHHHHHH-hcCC-
Confidence 777776 6554433 3456778888888887642 256788889999999999998 76 4
Q ss_pred CCCcccccCCcceEEecCCC---HHHHHHHHHcccEEEeCC-------C--eEEeccCChhhHHHHHHHHH
Q 012238 402 GKDWSFILRQIGMFSFTGLN---KAQSDNMTNKWHVYMTKD-------G--RISLAGLSLAKCEYLADAII 460 (467)
Q Consensus 402 ~~~~~~~~~~~g~f~~~~l~---~~~~~~ll~~~gI~v~~g-------g--Ris~~~~~~~~i~~~~~~l~ 460 (467)
+++. +.+|+|+|+.+. .++.+.|. ++||.+.+| + |||++ +++++++++++|+
T Consensus 283 ---~~~~-~~~g~~~~~~~~~~~~~~~~~L~-~~gI~v~~g~~f~~~~~~iRls~~--~~~~i~~~~~~l~ 346 (346)
T TIGR01141 283 ---LEVY-PSDANFVLIRFPRDADALFEALL-EKGIIVRDLNSYPGLPNCLRITVG--TREENDRFLAALR 346 (346)
T ss_pred ---CEEC-CCcCCEEEEecCCCHHHHHHHHH-HCCeEEEeCCCcCCCCCeEEEecC--CHHHHHHHHHHhC
Confidence 5544 445778888653 34455555 569999886 2 99987 5789999888763
No 105
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=1.9e-36 Score=301.92 Aligned_cols=325 Identities=17% Similarity=0.188 Sum_probs=240.6
Q ss_pred ccchHHHhhcCCCCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCccccc
Q 012238 70 ILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKE 149 (467)
Q Consensus 70 i~~~~~~~~~~~~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~ 149 (467)
+....+++..+ ..++|+|+.|++ ..++ ++.+++++.+.+.. ...|++. ..+++|+++|+++.. ++
T Consensus 22 ~~~~~~~~~~~-~~~~i~l~~~~~----~~~~-~~~~~~~~~~~~~~--~~~y~~~-~~~~lr~~ia~~~~~------~~ 86 (361)
T PRK00950 22 KEEIAREYGID-PESIIKLGSNEN----PLGP-SPKAVEAIEKELSK--IHRYPEP-DAPELREALSKYTGV------PV 86 (361)
T ss_pred HHHHHHHhCCC-ccceEEccCCCC----CCCC-CHHHHHHHHHHHHh--hcCCCCC-CHHHHHHHHHHHhCC------CH
Confidence 33344444422 237999999976 4443 67778887776543 2567554 459999999999742 36
Q ss_pred CceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCC
Q 012238 150 QRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGG 229 (467)
Q Consensus 150 ~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 229 (467)
++|++ .++|+++++.++ +...+.+||+|+++.|+|+.|...++..|++++.++. +.++++|++.+++.+. .+
T Consensus 87 ~~i~~-~~~Ga~~~i~~~--~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~l~~~~~---~~ 158 (361)
T PRK00950 87 ENIIV-GGDGMDEVIDTL--MRTFIDPGDEVIIPTPTFSYYEISAKAHGAKPVYAKR--EEDFSLDVDSVLNAIT---EK 158 (361)
T ss_pred HHEEE-eCCCHHHHHHHH--HHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeec--CCCCCcCHHHHHHHhc---cC
Confidence 77766 136778888886 3334569999999999999999999999999999985 4467899999999886 46
Q ss_pred cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccC
Q 012238 230 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY 309 (467)
Q Consensus 230 ~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~ 309 (467)
++++++++||||||.+++.+++.+| |+++|+++|+||+|.++... + ...+....+++++++||||.+|+|
T Consensus 159 ~~~v~~~~p~nptG~~~~~~~l~~l---~~~~~~~li~De~y~~~~~~----~---~~~~~~~~~~vi~~~S~SK~~g~~ 228 (361)
T PRK00950 159 TKVIFLCTPNNPTGNLIPEEDIRKI---LESTDALVFVDEAYVEFAEY----D---YTPLALEYDNLIIGRTFSKVFGLA 228 (361)
T ss_pred CCEEEEeCCCCCCCCCcCHHHHHHH---HHHCCcEEEEECchhhhCcc----c---hHHHHHhcCCEEEEEeehHhhcCc
Confidence 6788889999999999999977766 66789999999999887621 1 122334456899999999999999
Q ss_pred CCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHH
Q 012238 310 AERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQ 389 (467)
Q Consensus 310 G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~ 389 (467)
|+|+||++ .++++++. +.+..... +.+.+.|.++..+|.+.+ .+++.+++++++|+
T Consensus 229 GlRiG~~~---~~~~~~~~------------~~~~~~~~--~~~~~~~~~a~~~l~~~~-------~~~~~~~~~~~~r~ 284 (361)
T PRK00950 229 GLRIGYGF---VPEWLIDY------------YMRAKTPF--SLTRLSQAAAIAALSDKE-------YIEKSIEHGIKSRE 284 (361)
T ss_pred hhhcchhc---CCHHHHHH------------HHHhcCCC--CCCHHHHHHHHHHhcCHH-------HHHHHHHHHHHHHH
Confidence 99999995 78888777 55554432 356778888888887542 24566777888888
Q ss_pred HHHHHhhhccCCCCCcccccCCcceEEecCC---C-HHHHHHHHHcccEEEeCC------C----eEEeccCChhhHHHH
Q 012238 390 KLFDSLSAKDKSGKDWSFILRQIGMFSFTGL---N-KAQSDNMTNKWHVYMTKD------G----RISLAGLSLAKCEYL 455 (467)
Q Consensus 390 ~l~~~l~~~~g~~~~~~~~~~~~g~f~~~~l---~-~~~~~~ll~~~gI~v~~g------g----Ris~~~~~~~~i~~~ 455 (467)
.+.+.|. +.. .+.+++|+|+.+ + .++++.+.+ +||.+.+| + |||++ +.++++++
T Consensus 285 ~l~~~l~--------~~~-~~~~~~~i~~~~~~~~~~~~~~~l~~-~gv~v~~~~~f~~~~~~~lRis~~--~~~~~~~l 352 (361)
T PRK00950 285 YLYNELP--------FKV-YPSEANFVLVDVTPMTAKEFCEELLK-RGVIVRDCTSFRGLGDYYIRVSIG--TFEENERF 352 (361)
T ss_pred HHHhhcC--------eeE-CCCcceEEEEECCCCCHHHHHHHHHH-CCEEEeeCCccCCCCCCeEEEECC--CHHHHHHH
Confidence 8877664 233 345678888854 3 344666655 69999875 1 99998 46799999
Q ss_pred HHHHHHHH
Q 012238 456 ADAIIDSY 463 (467)
Q Consensus 456 ~~~l~~~l 463 (467)
+++|++++
T Consensus 353 ~~~L~~il 360 (361)
T PRK00950 353 LEILKEIV 360 (361)
T ss_pred HHHHHHHh
Confidence 99999876
No 106
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=100.00 E-value=1.9e-36 Score=297.70 Aligned_cols=316 Identities=18% Similarity=0.189 Sum_probs=239.7
Q ss_pred CCcccchHHHhhcCCCCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcc
Q 012238 67 PDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSV 146 (467)
Q Consensus 67 ~~~i~~~~~~~~~~~~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~ 146 (467)
+.+|..+..++. .+++++++|+.|.+ ..++ + +.+.. . .. ...|++..+ +++|+++++++.
T Consensus 2 ~~~~~~~~~~~~-~~~~~~~~~~~~~~----~~~~--~-~~~~~---~-~~-~~~y~~~~~-~~lr~~la~~~~------ 61 (330)
T TIGR01140 2 GGNLRRAAARYG-IPPEDWLDFSTGIN----PLGP--P-VPPIP---A-SA-WARYPDPEY-DELRAAAAAYYG------ 61 (330)
T ss_pred CccHHHHHHHcC-CChhheeEccccCC----CCCC--C-hhhcc---h-HH-HhhCCCccH-HHHHHHHHHHhC------
Confidence 456666777665 34568999999986 3332 2 22211 1 11 266765555 999999999974
Q ss_pred cccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcC
Q 012238 147 LKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA 226 (467)
Q Consensus 147 ~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~ 226 (467)
+++++|++ |+|+++++.++ ...+.+| +|++++|+|..|...++..|++++.++ |++.+++.++
T Consensus 62 ~~~~~i~~--t~G~~~~i~~~---~~~l~~g-~vl~~~p~y~~~~~~~~~~g~~~~~~~---------d~~~l~~~~~-- 124 (330)
T TIGR01140 62 LPAASVLP--VNGAQEAIYLL---PRLLAPG-RVLVLAPTYSEYARAWRAAGHEVVELP---------DLDRLPAALE-- 124 (330)
T ss_pred CChhhEEE--CCCHHHHHHHH---HHHhCCC-eEEEeCCCcHHHHHHHHHcCCEEEEeC---------CHHHHHhhcc--
Confidence 23789999 99999999996 3345677 799999999999999999999988875 7888888874
Q ss_pred CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCc
Q 012238 227 PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL 306 (467)
Q Consensus 227 ~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~ 306 (467)
+++++++++||||||.+++.+++++|+++|+++|++||+||+|.++.+. . ++..+.+..+++++++||||.+
T Consensus 125 --~~~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~---~---~~~~~~~~~~~~i~~~S~SK~~ 196 (330)
T TIGR01140 125 --ELDVLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDFTPD---A---SLAPQAARFPGLVVLRSLTKFF 196 (330)
T ss_pred --cCCEEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECcccccCCc---c---chhhHhccCCCEEEEEecchhh
Confidence 2447778999999999999999999999999999999999999988753 1 2222233457899999999999
Q ss_pred ccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHH
Q 012238 307 GLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKN 386 (467)
Q Consensus 307 ~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~ 386 (467)
|++|+|+||++ .++++++. +...... .+++.++|.++..++++..+ .+..++++++
T Consensus 197 g~~G~R~G~i~---~~~~~~~~------------l~~~~~~--~~~s~~~q~~~~~~l~~~~~-------~~~~~~~~~~ 252 (330)
T TIGR01140 197 GLAGLRLGFVV---AHPALLAR------------LREALGP--WTVNGPARAAGRAALADTAW-------QAATRARLAA 252 (330)
T ss_pred cCchhhhhhee---CCHHHHHH------------HHhcCCC--CCchHHHHHHHHHHHhchHH-------HHHHHHHHHH
Confidence 99999999996 77777777 5544332 34567788898888876533 3456788999
Q ss_pred HHHHHHHHhhhccCCCCCcccccCCcceEEecCC--CHHHHHHHHHcccEEEeCCC----------eEEeccCChhhHHH
Q 012238 387 VRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL--NKAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEY 454 (467)
Q Consensus 387 ~r~~l~~~l~~~~g~~~~~~~~~~~~g~f~~~~l--~~~~~~~ll~~~gI~v~~gg----------Ris~~~~~~~~i~~ 454 (467)
+++.+.+.|+ +++. ++. .+.+|+|+|+.+ +.++.+++++ +||.+.||. ||++++ ..++ ++
T Consensus 253 ~~~~l~~~L~-~~~~---~~~-~~~~~~f~~~~~~~~~~l~~~l~~-~gi~v~pg~~f~~~~~~~iRi~~~~-~~~~-~~ 324 (330)
T TIGR01140 253 ERARLAALLA-RLGG---LEV-VGGTALFLLVRTPDAAALHEALAR-RGILIRDFDNFPGLDPRYLRFALPT-DEEN-DR 324 (330)
T ss_pred HHHHHHHHHH-hCCC---ceE-CCCCCeEEEEEcCCHHHHHHHHHH-CCEEEEECCCCCCCCCCEEEEEecC-HHHH-HH
Confidence 9999999999 7762 343 355789999876 3455667766 699999971 999987 4444 77
Q ss_pred HHHHH
Q 012238 455 LADAI 459 (467)
Q Consensus 455 ~~~~l 459 (467)
++++|
T Consensus 325 ~~~~l 329 (330)
T TIGR01140 325 LEEAL 329 (330)
T ss_pred HHHhh
Confidence 77765
No 107
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=100.00 E-value=4.4e-36 Score=284.02 Aligned_cols=321 Identities=17% Similarity=0.137 Sum_probs=256.9
Q ss_pred CCcCCCCcchHHHHHHHHHHHh-CCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhC
Q 012238 119 NKEYLPIEGLAAFNKVTAELLF-GADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDA 197 (467)
Q Consensus 119 ~~~Y~~~~G~~~lr~aia~~l~-~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~ 197 (467)
..+|++..|.++|+.-+.++.. ....+....=.|++ |+|.|.+++.+ +...+.+||.|+|..++|+.....++..
T Consensus 93 alQYg~s~G~peLl~fik~h~~~~ih~p~~~~wdiii--t~G~t~~l~~~--l~~~~N~gd~vlie~~ty~~AL~s~~a~ 168 (472)
T KOG0634|consen 93 ALQYGQSSGIPELLLFIKDHNRPTIHAPPYKNWDIII--TNGNTDGLFKV--LRTLINRGDHVLIEEYTYPSALQSMEAL 168 (472)
T ss_pred hhccccccCcHHHHHHHHHhccccccCCCCCCceEEE--ecCCchHHHHH--HHHhhcCCCceEEecccchHHHHhcccc
Confidence 4789999999999999999743 22223333337888 99999999998 4446889999999999999999999999
Q ss_pred CCCeEEeeeecCCCCCCChhhHHHHHHcC-------CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEecc
Q 012238 198 RVPWSEYRYYDPKTVGLDFEGMIADIKAA-------PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVA 270 (467)
Q Consensus 198 G~~~~~v~~~~~~~~~~d~~~l~~~l~~~-------~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Dea 270 (467)
|+++++|+++ ..++++|.|++.+... +...+++.|++.|||||..++.+..++|.++|++|+++||+||.
T Consensus 169 gv~~ipv~md---~~Gi~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdp 245 (472)
T KOG0634|consen 169 GVKIIPVKMD---QDGIDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDP 245 (472)
T ss_pred CceEEecccc---CCCCCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCc
Confidence 9999999884 3579999999988763 23568999999999999999999999999999999999999999
Q ss_pred CCCCCCCCC------CCChhHHHHHH----------hcCCeEEEEecCccCcccCCCccceEEEecCCHHHHhhhhhhhH
Q 012238 271 YQGFASGSL------DNDASSVRLFA----------TRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARCCEVAV 334 (467)
Q Consensus 271 y~~~~~~~~------~~~~~~~~~~~----------~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~ 334 (467)
|.-+.++.. +....+.+.+. +...+||-..||||.++ ||+|+||+. +++.++++
T Consensus 246 Yy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiia-PGlRlG~it---~~~~~l~r------ 315 (472)
T KOG0634|consen 246 YYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIA-PGLRLGWIT---GNSLFLKR------ 315 (472)
T ss_pred cceeeccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhhhc-CcceeEEee---cCHHHHHH------
Confidence 988877621 11112212222 22359999999999998 999999994 88888887
Q ss_pred HHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCC-cccccCCcc
Q 012238 335 IQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKD-WSFILRQIG 413 (467)
Q Consensus 335 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~~~~-~~~~~~~~g 413 (467)
.-......+.+++.+.|.++.+.|....- +-|.+.+.+.+..|..+|+.+..+|. +. +|.. +++.+|.+|
T Consensus 316 ------il~~ae~~t~~pSg~sq~iv~a~l~~wgq-eG~~~wi~~l~~~Yt~Rrn~~l~Al~-ky-lp~~~~~~~~P~aG 386 (472)
T KOG0634|consen 316 ------ILDLAEVATSGPSGFSQGIVYAMLKRWGQ-EGFLRWIQHLRSSYTERRNALLSALD-KY-LPKSVCEYHPPKAG 386 (472)
T ss_pred ------HhhhcceeecCcccccHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH-Hh-CCCCeeEEecCCcc
Confidence 55555556778999999999888765432 33556688999999999999999998 43 2333 678899999
Q ss_pred eEEecCCC-------------HHHHHHHHHcccEEEeCCC---------------eEEeccCChhhHHHHHHHHHHHHHh
Q 012238 414 MFSFTGLN-------------KAQSDNMTNKWHVYMTKDG---------------RISLAGLSLAKCEYLADAIIDSYHN 465 (467)
Q Consensus 414 ~f~~~~l~-------------~~~~~~ll~~~gI~v~~gg---------------Ris~~~~~~~~i~~~~~~l~~~l~~ 465 (467)
+|+|+.++ .+.+...+.++||.+.+|. |++|+..+.++++++++++..++++
T Consensus 387 mFiwv~i~~~~~~~~~~i~q~~e~i~~~~vk~gV~~v~G~~F~v~p~~s~~kiffRls~a~a~~e~l~~g~~rf~~~ike 466 (472)
T KOG0634|consen 387 MFIWVEIPYINFDTKKSINQIEEIIFIKAVKNGVKLVCGSWFMVDPESSWSKIFFRLSIAFAEPEKLDEGIERFGSVIKE 466 (472)
T ss_pred eEEEEEecccccccccchHHHHHHHHHHHHHCCeEEecCceeEEcCccCCCcceEEEEeecCCHHHHHHHHHHHHHHHHH
Confidence 99998663 2345666667899999982 9999988889999999999998875
No 108
>PRK08354 putative aminotransferase; Provisional
Probab=100.00 E-value=8.7e-36 Score=290.58 Aligned_cols=292 Identities=13% Similarity=0.181 Sum_probs=213.2
Q ss_pred CCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchh
Q 012238 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (467)
Q Consensus 83 ~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (467)
.++|+|+.|++ ..+ |+.+.+++.+.... ...|+. ...+|+++++++. ++|++ |+|+++
T Consensus 8 ~~~i~l~~~~n----p~~--p~~~~~a~~~~~~~--~~~yp~---~~~l~~~ia~~~~---------~~I~v--t~G~~~ 65 (311)
T PRK08354 8 EGLIDFSASVN----PYP--PEWLDEMFERAKEI--SGRYTY---YEWLEEEFSKLFG---------EPIVI--TAGITE 65 (311)
T ss_pred cceeEecCCCC----CCC--CHHHHHHHHHHHHH--hhcCCC---hHHHHHHHHHHHC---------CCEEE--CCCHHH
Confidence 37899999865 333 56788888776543 246743 4679999999963 37888 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCC
Q 012238 163 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT 242 (467)
Q Consensus 163 al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPT 242 (467)
++.++ +..+.+||+|++++|+|+.|..+++..|++++.+ .+|++.+++.++ +++++++++|||||
T Consensus 66 al~~~---~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~~--------~~d~~~l~~~~~----~~~~vi~~~P~NPT 130 (311)
T PRK08354 66 ALYLI---GILALRDRKVIIPRHTYGEYERVARFFAARIIKG--------PNDPEKLEELVE----RNSVVFFCNPNNPD 130 (311)
T ss_pred HHHHH---HHhhCCCCeEEEeCCCcHHHHHHHHHcCCEEeec--------CCCHHHHHHhhc----CCCEEEEecCCCCC
Confidence 99986 2344599999999999999999999999998764 257888888775 34578889999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecCC
Q 012238 243 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 322 (467)
Q Consensus 243 G~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~ 322 (467)
|.+++.+++++|+++|+++|+++|+||+|.+|.++. .. . ..+++++++||||+|++||+|+||++ +
T Consensus 131 G~~~~~~~l~~l~~~a~~~~~~li~De~y~~f~~~~---~~--~-----~~~~vi~~~S~SK~~~l~GlRiG~~v---~- 196 (311)
T PRK08354 131 GKFYNFKELKPLLDAVEDRNALLILDEAFIDFVKKP---ES--P-----EGENIIKLRTFTKSYGLPGIRVGYVK---G- 196 (311)
T ss_pred CCccCHHHHHHHHHHhhhcCcEEEEeCcchhccccc---cc--c-----CCCcEEEEeccHhhcCCccceeeeee---e-
Confidence 999999999999999999999999999999998753 11 1 14689999999999999999999996 3
Q ss_pred HHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC
Q 012238 323 SDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSG 402 (467)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~~ 402 (467)
.++. ++...... ..+...+.++..++.+ .+ +++.+.++.+++.++.+.+.+
T Consensus 197 --~~~~------------l~~~~~~~--~~~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~~~~~~l~~~l------- 247 (311)
T PRK08354 197 --FEEA------------FRSVRMPW--SIGSTGYAFLEFLIED-DF-----EHLRKTMPLIWREKERFEKAL------- 247 (311)
T ss_pred --hHHH------------HHHcCCCc--cCCHHHHHHHHHHHHh-HH-----HHHHHHHHHHHHHHHHHHHhc-------
Confidence 3444 44443332 3344556666655553 21 223444555555555443322
Q ss_pred CCcccccCCcceEEecCC-C-HHHHHHHHHcccEEEeCCC--------eEEeccCChhhHHHHHHHHHHH
Q 012238 403 KDWSFILRQIGMFSFTGL-N-KAQSDNMTNKWHVYMTKDG--------RISLAGLSLAKCEYLADAIIDS 462 (467)
Q Consensus 403 ~~~~~~~~~~g~f~~~~l-~-~~~~~~ll~~~gI~v~~gg--------Ris~~~~~~~~i~~~~~~l~~~ 462 (467)
..+++++||++ ++ + .++++.+ .++||.+.||. ||+++. +++.++++++|+++
T Consensus 248 ----~~~~~~~~~~~-~~~~~~~~~~~l-~~~gv~v~~g~~f~~~~~iRi~~~~--~~~~~~l~~al~~~ 309 (311)
T PRK08354 248 ----YVKSDANFFIK-DVGDAEKFVEFL-KRNGILVRDCTSFGLPGYIRFSVRD--REENEKLIRALREW 309 (311)
T ss_pred ----CCCCCCcEEEE-ECCCHHHHHHHH-HHCCeEEEecccCCCCCeEEEEeCC--HHHHHHHHHHHHHh
Confidence 13567776664 44 3 3445555 55699999982 999985 46778888888765
No 109
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=100.00 E-value=1.1e-31 Score=272.61 Aligned_cols=338 Identities=11% Similarity=0.066 Sum_probs=243.4
Q ss_pred CCCCCcEEecCcccC-CCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecC
Q 012238 80 DTDEKKLNLGVGAYR-TEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGL 158 (467)
Q Consensus 80 ~~~~~~i~l~~G~~~-d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ 158 (467)
+.+.++|+|++|+|. |-.. |.....+.++..+++..+. ..|.+..|.++||+++++++.. +++++ |.
T Consensus 33 ~~g~~~~~L~~g~p~~D~~t-ds~t~a~~~a~~~a~~~g~-~~Y~~~~g~~~Lreaia~~~~~--------~~vv~--t~ 100 (460)
T PRK13238 33 EAGYNPFLLKSEDVFIDLLT-DSGTGAMSDRQWAAMMRGD-EAYAGSRSYYRLEDAVKDIFGY--------PYTIP--TH 100 (460)
T ss_pred HcCCCEEeCCCCCCCCCCCC-CCCchhhhHHHHHHHHhCC-cccCCCCCHHHHHHHHHHHhCC--------CcEEE--CC
Confidence 345689999999983 2211 1112256777777665554 7899999999999999999743 36777 99
Q ss_pred CchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecC------CCC--CCChhhHHHHHHcCC-CC
Q 012238 159 SGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDP------KTV--GLDFEGMIADIKAAP-GG 229 (467)
Q Consensus 159 ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~------~~~--~~d~~~l~~~l~~~~-~~ 229 (467)
||++|+.++ +...+.||| |++++|.|..|...++..|++++.+++++. +.| .+|++.|++.+++.. ++
T Consensus 101 ggt~A~~~~--~~all~pGD-Vii~~p~~~~~~~~i~~~G~~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i~~~~~~~ 177 (460)
T PRK13238 101 QGRAAEQIL--FPVLIKKGD-VVPSNYHFDTTRAHIELNGATAVDLVIDEALDTGSRHPFKGNFDLEKLEALIEEVGAEN 177 (460)
T ss_pred CHHHHHHHH--HHHhCCCCC-EEccCCcccchHHHHHHcCCEEEEEeccccccccccccccCCcCHHHHHHHHhhcCCCc
Confidence 999999998 555688999 999999999999999999999999998531 233 499999999997532 46
Q ss_pred cEEEEeCCCCCCCC-CCCCHHHHHHHHHHHHhcCCeeEEeccCC--CCCCCCC---CCChhHHHHHHhcCCeEEEEecCc
Q 012238 230 SFILLHGCAHNPTG-IDPTPEQWEKIADVIQEKNHIPFFDVAYQ--GFASGSL---DNDASSVRLFATRGMELLVAQSYS 303 (467)
Q Consensus 230 ~~~i~i~~p~NPTG-~~~~~~~l~~l~~~~~~~~~~li~Deay~--~~~~~~~---~~~~~~~~~~~~~~~~~i~~~S~S 303 (467)
++++++++|||||| .+++.+++++|.++|++||++||+|+++. ...+... .....++..+ +..++|++
T Consensus 178 tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i------~~~~~s~~ 251 (460)
T PRK13238 178 VPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEI------AREMFSYA 251 (460)
T ss_pred eeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHH------hhhhcccC
Confidence 89999999999997 99999999999999999999999999652 2222110 0111122122 34457888
Q ss_pred cCcccCCCccc-----eEEEecCCHHHHhhhhhhhHHHHHHHHHhhc----cC-ccCCCchHHHHHHHHHhCChhhHHHH
Q 012238 304 KNLGLYAERIG-----AMNVVCSSSDLAARCCEVAVIQVKSQLKRLA----RP-MYSNPPVHGARIVANVVGNPALFDEW 373 (467)
Q Consensus 304 K~~~~~G~RiG-----~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~----~~-~~~~~~~~~~~~~~~~L~~~~~~~~~ 373 (467)
|.+.+.|||+| +++ ++.++++++. ++... .. .+.+.+...|.+++..|.+ ...+.|
T Consensus 252 D~~~~Sg~K~g~~~~GG~i-~~~d~~l~~~------------~~~~~~~~~g~~t~~g~~~~~~~Ala~~l~e-~~~~~~ 317 (460)
T PRK13238 252 DGLTMSAKKDAMVNIGGLL-CFRDEDLFTE------------CRTLCILYEGFPTYGGLAGRDMEALAVGLYE-GMDEDY 317 (460)
T ss_pred cEEEEecccCCCCcceeEE-EcChHHHHHH------------hhhcccccCCcccccCcHHHHHHHHHhhHHH-hhChHH
Confidence 88888888874 443 2344677766 54442 11 2334444456666655542 111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceEEecCC-------------CHHHHHHHHHcccEEEeCCC
Q 012238 374 KAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL-------------NKAQSDNMTNKWHVYMTKDG 440 (467)
Q Consensus 374 ~~~l~~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~~~g~f~~~~l-------------~~~~~~~ll~~~gI~v~~gg 440 (467)
++.+ .+++++|.+.|. +.| +.+..|.||+|+|++. +.+++.+|+++.||.+.|+|
T Consensus 318 ---~~~~----~~~~~~l~~~L~-~~G----~~~~~p~Gg~~v~~d~~~~~~~~~~~~~~~~~~a~~L~~e~GV~~~~~~ 385 (460)
T PRK13238 318 ---LAYR----IGQVEYLGEGLE-EAG----VPIQTPAGGHAVFVDAGKFLPHIPAEQFPAQALACELYLEAGIRGVEIG 385 (460)
T ss_pred ---HHHH----HHHHHHHHHHHH-HCC----CCeEccCCceEEEEEchhcCCCCCCCCCchHHHHHHHHHHcCeeeeccc
Confidence 2222 235799999998 877 5788899999999853 24578899999999998862
Q ss_pred ---------------------eEEecc--CChhhHHHHHHHHHHHHH
Q 012238 441 ---------------------RISLAG--LSLAKCEYLADAIIDSYH 464 (467)
Q Consensus 441 ---------------------Ris~~~--~~~~~i~~~~~~l~~~l~ 464 (467)
|+++.. .+.+++++++++|+++.+
T Consensus 386 ~f~~~~~~~~~~~~~~~~~~~Rla~~rr~~~~~~~~~~~~~l~~~~~ 432 (460)
T PRK13238 386 SLLLGRDPKTGEQLPAPAELLRLAIPRRVYTQSHMDYVAEALKAVKE 432 (460)
T ss_pred ceecccCCCCccccCCccceEEEecccccCCHHHHHHHHHHHHHHHH
Confidence 888864 478999999999998865
No 110
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=100.00 E-value=1.7e-31 Score=264.54 Aligned_cols=333 Identities=20% Similarity=0.226 Sum_probs=251.2
Q ss_pred EEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHH
Q 012238 86 LNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLR 165 (467)
Q Consensus 86 i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~ 165 (467)
|||+.|.+ .+.. .+.+..++...........|.+..|..++++.+++++....+....++++++ ++|+++++.
T Consensus 1 ~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~--~~~~t~a~~ 73 (350)
T cd00609 1 IDLSIGEP----DFPP-PPEVLEALAAAALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPPEEIVV--TNGAQEALS 73 (350)
T ss_pred CCCCCCCC----CCCC-CHHHHHHHHHHhhccCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcceEEE--ecCcHHHHH
Confidence 57888877 3333 4444444433222223467888999999999999999876655555678888 999999999
Q ss_pred HHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCCh--hhHHHHHHcCCCCcEEEEeCCCCCCCC
Q 012238 166 LAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDF--EGMIADIKAAPGGSFILLHGCAHNPTG 243 (467)
Q Consensus 166 l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~--~~l~~~l~~~~~~~~~i~i~~p~NPTG 243 (467)
.+ +.....+||+|+++.|+|..+...++..|.+++.++..+ .+..+. +.++.... ++++++++++++||||
T Consensus 74 ~~--~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~~~---~~~~~v~i~~~~~~tG 146 (350)
T cd00609 74 LL--LRALLNPGDEVLVPDPTYPGYEAAARLAGAEVVPVPLDE--EGGFLLDLELLEAAKT---PKTKLLYLNNPNNPTG 146 (350)
T ss_pred HH--HHHhCCCCCEEEEcCCCchhHHHHHHHCCCEEEEEeccc--ccCCccCHHHHHhhcC---ccceEEEEECCCCCCC
Confidence 87 333456899999999999999999999999999999853 333443 44444333 5677888888999999
Q ss_pred CCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecCCH
Q 012238 244 IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSS 323 (467)
Q Consensus 244 ~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~ 323 (467)
.+++.+++++|+++|+++|+++|+|++|.++.+...... ..........+++++|++|.++.+|.|+||++ .++
T Consensus 147 ~~~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~~~~~~---~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~---~~~ 220 (350)
T cd00609 147 AVLSEEELEELAELAKKHGILIISDEAYAELVYDGEPPP---ALALLDAYERVIVLRSFSKTFGLPGLRIGYLI---APP 220 (350)
T ss_pred cccCHHHHHHHHHHHHhCCeEEEEecchhhceeCCcccc---cccCcCccCcEEEEeecccccCCcccceEEEe---cCH
Confidence 999999999999999999999999999998876532111 00112334578999999999999999999996 455
Q ss_pred -HHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC
Q 012238 324 -DLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSG 402 (467)
Q Consensus 324 -~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~~ 402 (467)
++.+. ++......+.+++...+.++..+|.... +.+++.+++++++++.+.+.|+ +.+.
T Consensus 221 ~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~------~~~~~~~~~~~~~~~~l~~~L~-~~~~- 280 (350)
T cd00609 221 EELLER------------LKKLLPYTTSGPSTLSQAAAAAALDDGE------EHLEELRERYRRRRDALLEALK-ELGP- 280 (350)
T ss_pred HHHHHH------------HHHHHHhcccCCChHHHHHHHHHHhCcH------HHHHHHHHHHHHHHHHHHHHHH-hcCC-
Confidence 67776 5544444456778888888887777542 3367788889999999999999 7763
Q ss_pred CCcccccCCcceEEecCCC----HHHHHHHHHcccEEEeCC------C----eEEeccCChhhHHHHHHHHHH
Q 012238 403 KDWSFILRQIGMFSFTGLN----KAQSDNMTNKWHVYMTKD------G----RISLAGLSLAKCEYLADAIID 461 (467)
Q Consensus 403 ~~~~~~~~~~g~f~~~~l~----~~~~~~ll~~~gI~v~~g------g----Ris~~~~~~~~i~~~~~~l~~ 461 (467)
+....+.+|+|+|+.+. .+.+.++++++||.+.++ + ||+++.. ++++++++++|++
T Consensus 281 --~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~gi~i~~~~~~~~~~~~~iRi~~~~~-~~~i~~~~~al~~ 350 (350)
T cd00609 281 --LVVVKPSGGFFLWLDLPEGDDEEFLERLLLEAGVVVRPGSAFGEGGEGFVRLSFATP-EEELEEALERLAE 350 (350)
T ss_pred --ccccCCCccEEEEEecCCCChHHHHHHHHHhCCEEEecccccccCCCCeEEEEeeCC-HHHHHHHHHHhhC
Confidence 22245677889988653 456778888889999886 3 9999985 8999999998863
No 111
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=6.8e-31 Score=237.21 Aligned_cols=361 Identities=17% Similarity=0.142 Sum_probs=258.6
Q ss_pred ccchHHHhhcC-CCCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcC----CCCcCCCCcchHHHHHHHHHHHhCCCC
Q 012238 70 ILGVSEAFKAD-TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG----ENKEYLPIEGLAAFNKVTAELLFGADN 144 (467)
Q Consensus 70 i~~~~~~~~~~-~~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~----~~~~Y~~~~G~~~lr~aia~~l~~~~~ 144 (467)
|.+++++++.. ..++.|.|+-|.| ...|.+.+-..+...+++..+ ...+|..++|...|.+++++.+.+.+|
T Consensus 16 i~~lMdDl~d~Lrt~g~imLggGNP---a~iPem~~~f~~~~aemla~~~~~e~~cnY~~pQG~~~li~ala~~l~~~yg 92 (417)
T COG3977 16 ITQLMDDLNDGLRTPGAIMLGGGNP---ARIPEMDDYFQDLLAEMLASGKATEALCNYDGPQGKAVLIDALAKMLRREYG 92 (417)
T ss_pred HHHHHHHHHhhccCCCceeeCCCCc---ccChhHHHHHHHHHHHHHhcchHHHHHhcCCCCcchhHHHHHHHHHHHHHhC
Confidence 55666666522 3457999999987 123333344444445554332 236799999999999999999999999
Q ss_pred cccccCceeeeecCCchhHHHHHHHHHHHhC-CCC--EEEEc-CCCCcchHHHHhhCCCCeEE---eeeecCC--CCCCC
Q 012238 145 SVLKEQRVATVQGLSGTGSLRLAAALIERYF-PGA--KVLIS-SPTWGNHKNIFNDARVPWSE---YRYYDPK--TVGLD 215 (467)
Q Consensus 145 ~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~-~gd--~Vlv~-~P~y~~~~~~~~~~G~~~~~---v~~~~~~--~~~~d 215 (467)
+.++++||.+ |+|++.+++-++.+++... .|+ +|+.| .|.|.+|..+.-.-..=|.. ++..+.. .+.+|
T Consensus 93 wnit~~NIal--TnGSQs~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~l~~d~fVs~kP~iel~~~g~FKY~vD 170 (417)
T COG3977 93 WNITAQNIAL--TNGSQSAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGLEEDLFVSAKPNIELLPAGQFKYHVD 170 (417)
T ss_pred CCCccceeee--cCCccchHHHHHHHhcCccCCCcceeEeeccChhhccccccccCccceeeccCCcccccccceeeccC
Confidence 9999999999 9999999998755554333 454 56665 59998887653211110110 1121122 34567
Q ss_pred hhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCe
Q 012238 216 FEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGME 295 (467)
Q Consensus 216 ~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~ 295 (467)
++.+.- . +.+-+++++-|.||||.+++.+|+.+|..++++||+.+|+|.+|.---.+-.-.|..+ -..++
T Consensus 171 F~~l~i--~---e~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~PFP~iifsd~~~-----~w~~N 240 (417)
T COG3977 171 FEHLHI--G---ESTGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVPFPGIIFSDATP-----LWNEN 240 (417)
T ss_pred HHHccc--c---cccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCCCCCceecccccc-----cCCCC
Confidence 777643 2 5677888899999999999999999999999999999999999863322111011111 24579
Q ss_pred EEEEecCccCcccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHH
Q 012238 296 LLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKA 375 (467)
Q Consensus 296 ~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~ 375 (467)
++.+.|+|| +|+||.|+|-++ ++++++.. +..........+..+++++++.+++.+++.+.-+
T Consensus 241 iilC~SLSK-~GLPG~R~GIiI---ane~viqa------------itnmn~iisLap~~~G~Aia~~mie~gdl~rlse- 303 (417)
T COG3977 241 IILCMSLSK-LGLPGSRCGIII---ANEKVIQA------------ITNMNGIISLAPGRMGPAIAAEMIESGDLLRLSE- 303 (417)
T ss_pred EEEEeehhh-cCCCCcceeEEE---ccHHHHHH------------HHhccceeeecCCCccHHHHHHHhhcchHHHHHH-
Confidence 999999999 689999999996 88988887 6666555556788889999999999887754321
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceEEec-----CCCHHHHHHHHHcccEEEeCCC----------
Q 012238 376 EMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFT-----GLNKAQSDNMTNKWHVYMTKDG---------- 440 (467)
Q Consensus 376 ~l~~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~~~g~f~~~-----~l~~~~~~~ll~~~gI~v~~gg---------- 440 (467)
.-++..|+++.+...+.|+..++- ..|..++|+|..|+|+ .++.+.+-+.|++.||.++||.
T Consensus 304 --qVIrPFY~~~~q~~~~~l~~~lp~-~~~~iHkpEGAIFlWLWf~dLPItt~~LYq~LKa~Gvl~VPG~~FFpGl~~ew 380 (417)
T COG3977 304 --QVIRPFYRNRVQTTIAILRRYLPE-YRCLIHKPEGAIFLWLWFKDLPITTEELYQRLKARGVLMVPGHYFFPGLDKEW 380 (417)
T ss_pred --HhhhHHHHHHHHHHHHHHHHhcCc-cceeeecCCcceeehhhhccCCCCHHHHHHHHHhCeEEEecccccCCCCCCCC
Confidence 345667777777777777633332 2377889999999886 3355555555666799999992
Q ss_pred -------eEEeccCChhhHHHHHHHHHHHHHhc
Q 012238 441 -------RISLAGLSLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 441 -------Ris~~~~~~~~i~~~~~~l~~~l~~~ 466 (467)
|+|+.. +++.++..+++|.+.+++.
T Consensus 381 pH~hqC~Rmn~~~-~~~~ie~Gva~lae~ve~~ 412 (417)
T COG3977 381 PHTHQCMRMNYVP-EPEKIEKGVAILAEEVERA 412 (417)
T ss_pred CCccceEEEecCC-CHHHHHHHHHHHHHHHHHH
Confidence 999998 8899999999999888753
No 112
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=99.97 E-value=1.4e-28 Score=229.55 Aligned_cols=322 Identities=18% Similarity=0.162 Sum_probs=249.0
Q ss_pred CCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhC
Q 012238 118 ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDA 197 (467)
Q Consensus 118 ~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~ 197 (467)
..-.|....|++-+|+.+|+++.+++|.+.+|++|++ |.|++.|+..+..++ .-.+.+.|++|-|.|+-|...+..+
T Consensus 105 s~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p~dI~L--T~GAS~ai~~il~l~-~~~~~~GvliPiPQYPLYsAti~l~ 181 (475)
T KOG0258|consen 105 SLGAYSDSQGVPGVRKHVAEFIERRDGIPADPEDIFL--TTGASPAIRSILSLL-IAGKKTGVLIPIPQYPLYSATISLL 181 (475)
T ss_pred cccccccccCChhHHHHHHHHHHhccCCCCCHHHeee--cCCCcHHHHHHHHHH-hcCCCCceEeecCCCchhHHHHHHh
Confidence 4467999999999999999999999998899999999 999999999974333 1127789999999999999999999
Q ss_pred CCCeEEeeeecCCCCCCChhhHHHHHHcC--CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCC
Q 012238 198 RVPWSEYRYYDPKTVGLDFEGMIADIKAA--PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFA 275 (467)
Q Consensus 198 G~~~~~v~~~~~~~~~~d~~~l~~~l~~~--~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~ 275 (467)
|...+.|-++++.+|.+|.++|++.++++ .-+.+++++.||.||||.+++++.+++|+.+|.+++++++.||+|++-.
T Consensus 182 ~~~~v~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~~~~l~llaDEVYQ~Nv 261 (475)
T KOG0258|consen 182 GGTQVPYYLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVLSEENIEGIICFAAEEGLVLLADEVYQDNV 261 (475)
T ss_pred CCcccceeeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccchhhcHHHHHHHHHHHHHcCeEEechHHHHhhc
Confidence 99999999988899999999999998764 3466788889999999999999999999999999999999999999998
Q ss_pred CCCCCCChhHHHHHH-hcC------CeEEEEecCccCc-ccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccC
Q 012238 276 SGSLDNDASSVRLFA-TRG------MELLVAQSYSKNL-GLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARP 347 (467)
Q Consensus 276 ~~~~~~~~~~~~~~~-~~~------~~~i~~~S~SK~~-~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 347 (467)
|.+ +...++.+..+ +.+ ..++.++|.||.+ |=.|.|-||+-++.-+++..+. +.++...
T Consensus 262 y~~-~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~~prv~~q------------i~Kl~si 328 (475)
T KOG0258|consen 262 YTT-GSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLNRDPRVKQQ------------IKKLASI 328 (475)
T ss_pred cCC-CcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeecccCChhHHHH------------HHHHHhh
Confidence 863 12333433322 221 2577888999977 4489999999754445554443 4444332
Q ss_pred ccCCCchHHHHHHHHHhCCh----hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceEEecCC---
Q 012238 348 MYSNPPVHGARIVANVVGNP----ALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL--- 420 (467)
Q Consensus 348 ~~~~~~~~~~~~~~~~L~~~----~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~~~g~f~~~~l--- 420 (467)
..+++..+|..+-...+.+ .-++.|..+.+.+.+.++++...+.+.+. ++. ++.+.+++|.||+|..+
T Consensus 329 -~lc~~V~GQ~~vdl~VnPP~Pgd~Sy~~~~~Ekd~il~~l~~ra~l~~~~~n-s~~---gi~cn~~qGAMY~fP~i~lP 403 (475)
T KOG0258|consen 329 -KLCPQVSGQKLVDLVVNPPKPGDPSYDLFSSEKDGILSSLRSRAKLTEDAFN-SLE---GISCNPVQGAMYLFPQISLP 403 (475)
T ss_pred -hhcCCccchhhhceecCCCCCCCcchhhhhhhhHhHHHHHHHHhHHHHHHHh-hcC---ceeeccCccceeecccccCC
Confidence 3345555666665555422 23455677778888999999999999998 764 26889999999999743
Q ss_pred -------------CHHH-HHHHHHcccEEEeCC-------C----eEEeccCChhhHHHHHHHHHHHHH
Q 012238 421 -------------NKAQ-SDNMTNKWHVYMTKD-------G----RISLAGLSLAKCEYLADAIIDSYH 464 (467)
Q Consensus 421 -------------~~~~-~~~ll~~~gI~v~~g-------g----Ris~~~~~~~~i~~~~~~l~~~l~ 464 (467)
..+| +.+||+..||.++|| | |.+|-. .. + ..++.+++.-+
T Consensus 404 ~kaie~A~~~~~~PD~FYc~~LLe~tGIcvVPGSGFGQ~~GtyH~R~TiLp--~~-~-~~i~~~~~fH~ 468 (475)
T KOG0258|consen 404 PKAIEAAKALGIAPDEFYCLKLLEATGICVVPGSGFGQKEGTYHFRTTILP--PG-L-EIIEKFKKFHA 468 (475)
T ss_pred HHHHHHHHHhCCCCcHHHHHHHHHhcCeEEecCCCCCCCCceeEEEEeecC--ch-h-HHHHHHHHHHH
Confidence 2345 789999999999999 2 777654 22 3 55566555433
No 113
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.96 E-value=1.5e-27 Score=239.09 Aligned_cols=342 Identities=12% Similarity=0.095 Sum_probs=233.7
Q ss_pred CCCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCc
Q 012238 81 TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 160 (467)
Q Consensus 81 ~~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~gg 160 (467)
.+-+++.|..|+++-.-..+.....+.++....+..+. ..|.+..|.++|++++++++.. +++++ |+||
T Consensus 9 ~g~n~~~l~~~~v~iDlltds~t~ams~~~~~a~~~gd-~~Y~~~~g~~~Leeaia~~~g~--------~~vv~--t~~G 77 (431)
T cd00617 9 AGYNVFLLRSEDVYIDLLTDSGTGAMSDYQWAAMMLGD-EAYAGSKSFYDLEDAVQDLFGF--------KHIIP--THQG 77 (431)
T ss_pred cCCCEEeCCCCCcCCCCCCCCCcHHHHHHHHHHHHhCC-CccCCCCCHHHHHHHHHHHHCC--------CeEEE--cCCH
Confidence 44578999999873211111111344444444444443 5699999999999999999744 36777 9999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCC--------CCCCChhhHHHHHHcC-CCCcE
Q 012238 161 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPK--------TVGLDFEGMIADIKAA-PGGSF 231 (467)
Q Consensus 161 t~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~--------~~~~d~~~l~~~l~~~-~~~~~ 231 (467)
++|+.++ +...+.|||.| +++|+|..+...+...|++++.++++++. .+.+|++.+++.+++. ..+++
T Consensus 78 t~Al~la--~~al~~pGD~V-~~~~~f~~~~~~i~~~Ga~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~~~~~ 154 (431)
T cd00617 78 RGAENIL--FSILLKPGRTV-PSNMHFDTTRGHIEANGAVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGAENIP 154 (431)
T ss_pred HHHHHHH--HHHhCCCCCEE-ccCCcccchHHHHHhCCCEeEEEecccccccccccCCCCCcCHHHHHHHhCcccCCCcc
Confidence 9999998 55568899987 69999999999999999999999986432 3459999999999853 23478
Q ss_pred EEEeCCCCCCC-CCCCCHHHHHHHHHHHHhcCCeeEEeccCCC--CCCC---CCCCChhHHHHHHhcCCeEEEEecCccC
Q 012238 232 ILLHGCAHNPT-GIDPTPEQWEKIADVIQEKNHIPFFDVAYQG--FASG---SLDNDASSVRLFATRGMELLVAQSYSKN 305 (467)
Q Consensus 232 ~i~i~~p~NPT-G~~~~~~~l~~l~~~~~~~~~~li~Deay~~--~~~~---~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 305 (467)
++++++||||+ |..++.+++++|.++|++||++||+|++... ..+- .......++.. .++.++|++|.
T Consensus 155 ~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si~e------i~~e~~s~sd~ 228 (431)
T cd00617 155 YIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSIAE------IAREMFSYADG 228 (431)
T ss_pred EEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCHHH------HHHHhhccCCE
Confidence 89999999998 9999999999999999999999999999321 1110 00011112221 23457788888
Q ss_pred cccCCCc------cceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCc-cCCCchHHHHHHHHHhCChhhHHHHHHHHH
Q 012238 306 LGLYAER------IGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPM-YSNPPVHGARIVANVVGNPALFDEWKAEME 378 (467)
Q Consensus 306 ~~~~G~R------iG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~ 378 (467)
+.+.|+| .||++ +.+++++++ ++.......... +.+.+.....+++..|.+.. + .+
T Consensus 229 ~~mS~~K~~~~~~GG~i~--~~d~~l~~~--------~~~~~~~~~~~~~~gG~~~r~~~A~A~gL~e~~------~-~~ 291 (431)
T cd00617 229 CTMSAKKDGLVNIGGFLA--LRDDELYEE--------ARQRVVLYEGFVTYGGMAGRDMEALAQGLREAV------E-ED 291 (431)
T ss_pred EEEEeecCCCCccceEEE--eCcHHHHHH--------HHHhccccCCccccccccHHHHHHHHHHHHhcc------c-HH
Confidence 8888888 45774 455568777 332110111111 12222222233332443210 0 12
Q ss_pred HHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceEEecCC-------------CHHHHHHHHHcccEEEeCC------
Q 012238 379 MMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL-------------NKAQSDNMTNKWHVYMTKD------ 439 (467)
Q Consensus 379 ~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~~~g~f~~~~l-------------~~~~~~~ll~~~gI~v~~g------ 439 (467)
...++++ +|++|.+.|+ +.| |.+..|.||+|+|++. +.+++.+|+++.||.+..-
T Consensus 292 ~l~~~~~-~r~~l~~~L~-~~G----~~v~~P~Ggh~v~~d~~~~~~~~~~~~~~~~~la~~L~~e~gV~~~~~g~~~~~ 365 (431)
T cd00617 292 YLRHRVE-QVRYLGDRLD-EAG----VPIVEPAGGHAVFIDAREFLPHIPQEQFPAQALAAELYLEAGVRAVELGIFSAG 365 (431)
T ss_pred HHHHHHH-HHHHHHHHHH-HCC----CCccCCCcceEEEEEhHHhcCCCCcccCcHHHHHHHHHHHcCeeEEeecceecc
Confidence 2333443 5688999999 888 5778899999999853 2355778999999987541
Q ss_pred -----C----------eEEecc--CChhhHHHHHHHHHHHHHh
Q 012238 440 -----G----------RISLAG--LSLAKCEYLADAIIDSYHN 465 (467)
Q Consensus 440 -----g----------Ris~~~--~~~~~i~~~~~~l~~~l~~ 465 (467)
| ||++.. .+.+++++++++|.+++++
T Consensus 366 ~~~~~~~~~~~~~~~~rl~~prr~~t~~~~~~~~~~~~~~~~~ 408 (431)
T cd00617 366 RDPNTGENKYPELELVRLAIPRRVYTQDHMDYVAAAVIALYER 408 (431)
T ss_pred cCCCCCcccCCccceeEEeccccccCHHHHHHHHHHHHHHHhh
Confidence 1 888753 4789999999999998864
No 114
>PRK10534 L-threonine aldolase; Provisional
Probab=99.96 E-value=6.1e-28 Score=237.95 Aligned_cols=316 Identities=13% Similarity=0.032 Sum_probs=210.9
Q ss_pred EEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHH
Q 012238 86 LNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLR 165 (467)
Q Consensus 86 i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~ 165 (467)
|||+..+. |.++|.+++++.+... + ...|+|..+..+|+++++++++.. .+++ +.||++++.
T Consensus 2 ~~~~~~~~------~~p~~~~~~a~~~~~~-~-~~~Y~~~~~~~~L~~~la~~~g~~--------~~~v--~~~g~~a~~ 63 (333)
T PRK10534 2 IDLRSDTV------TRPSRAMLEAMMAAPV-G-DDVYGDDPTVNALQDYAAELSGKE--------AALF--LPTGTQANL 63 (333)
T ss_pred cccccccC------CCCCHHHHHHHHhccC-C-CcccCCCHHHHHHHHHHHHHhCCC--------eEEE--eCchHHHHH
Confidence 56665432 3347899999877543 3 367888889999999999995432 3345 688888877
Q ss_pred HHHHHHHHhCCCCEEEEcCCCCcc-hHHH-HhhCC-CCeEEeeeecCCCCCCChhhHHHHHHcCC---CCcEEEEeCCCC
Q 012238 166 LAAALIERYFPGAKVLISSPTWGN-HKNI-FNDAR-VPWSEYRYYDPKTVGLDFEGMIADIKAAP---GGSFILLHGCAH 239 (467)
Q Consensus 166 l~~~~l~~~~~gd~Vlv~~P~y~~-~~~~-~~~~G-~~~~~v~~~~~~~~~~d~~~l~~~l~~~~---~~~~~i~i~~p~ 239 (467)
++ ++..+.+||+|+++.|+|.. |... ....| ++++.++. +.++.+|++.+++++.+.. .++++++++||+
T Consensus 64 ~~--l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~ 139 (333)
T PRK10534 64 VA--LLSHCERGEEYIVGQAAHNYLYEAGGAAVLGSIQPQPIDA--AADGTLPLDKVAAKIKPDDIHFARTRLLSLENTH 139 (333)
T ss_pred HH--HHHhcCCCCeeEEechhhhhHhcCCchHHhcCceEEeecC--CCCCCCCHHHHHHhhcccCcCcccceEEEEecCC
Confidence 76 44557799999999888753 4221 23333 57777776 3467899999999886310 157788888655
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccce-EEE
Q 012238 240 NPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGA-MNV 318 (467)
Q Consensus 240 NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~-~~~ 318 (467)
||.+++.+++++|+++|+++++++++||+|.......... ....+....+.++ .||||.|+++ +|| +
T Consensus 140 --~G~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~---~~~~~~~~~~~~~--~s~SK~~~~~---~G~~~-- 207 (333)
T PRK10534 140 --NGKVLPREYLKQAWEFTRERNLALHVDGARIFNAVVAYGC---ELKEITQYCDSFT--ICLSKGLGTP---VGSLL-- 207 (333)
T ss_pred --CCeecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCC---CHHHHHhcCCEEE--EEeEcCCCCc---ccceE--
Confidence 6999999999999999999999999999976221100001 1112222223333 4899998864 785 5
Q ss_pred ecCCHHHHhhhhhhhHHHHHHHHHhhccCccC--CCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 012238 319 VCSSSDLAARCCEVAVIQVKSQLKRLARPMYS--NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLS 396 (467)
Q Consensus 319 v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~ 396 (467)
++++++++. +++....... +.+...+.++...|.+ ..+..++.++.|+++.+.|+
T Consensus 208 -~~~~~~i~~------------~~~~~~~~~~~~~~~~~~~a~~~~~l~~----------~~~~~~~~~~~r~~l~~~L~ 264 (333)
T PRK10534 208 -VGNRDYIKR------------ARRWRKMTGGGMRQAGILAAAGLYALKH----------NVARLQEDHDNAAWLAEQLR 264 (333)
T ss_pred -EcCHHHHHH------------HHHHHHHhCCchhhHHHHHHHHHHHHHh----------hHHHHHHHHHHHHHHHHHHH
Confidence 488998887 5444433221 2223444444444421 11222234456789999999
Q ss_pred hccCCCCCcccccCCcceEEecCCC---HHHHHHHHHcccEEEeCCC--eEEec-cCChhhHHHHHHHHHHHHH
Q 012238 397 AKDKSGKDWSFILRQIGMFSFTGLN---KAQSDNMTNKWHVYMTKDG--RISLA-GLSLAKCEYLADAIIDSYH 464 (467)
Q Consensus 397 ~~~g~~~~~~~~~~~~g~f~~~~l~---~~~~~~ll~~~gI~v~~gg--Ris~~-~~~~~~i~~~~~~l~~~l~ 464 (467)
++| +++.++ .++|+|+.+. .+.+.++++++||.+.++. |++.. ..+++++++++++|++.+.
T Consensus 265 -~~g----~~~~~~-~~nfv~~~~~~~~~~~~~~~l~~~gi~v~~~~~~rl~~~~r~t~e~~~~~~~~l~~~~~ 332 (333)
T PRK10534 265 -EAG----ADVMRQ-DTNMLFVRVGEEQAAALGEYMRERNVLINASPIVRLVTHLDVSREQLAEVVAHWRAFLA 332 (333)
T ss_pred -hCC----CccCCC-CceEEEEECCchhHHHHHHHHHHcCeeecCCceEEEEEEeCCCHHHHHHHHHHHHHHhc
Confidence 877 466666 4778888653 3455667777899999986 88653 3488999999999997764
No 115
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.96 E-value=1.6e-26 Score=227.39 Aligned_cols=293 Identities=15% Similarity=0.140 Sum_probs=210.2
Q ss_pred hHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEE
Q 012238 103 LDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLI 182 (467)
Q Consensus 103 ~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv 182 (467)
.|.++++..+.++.- . ++..-..+|++.+|++++.. ++++++ ++||++++..+ +...+.|||+|++
T Consensus 35 ~~~~~~~~~~~~~~~--~--g~~~~~~~Le~~lA~~~g~~------~e~ilv--~~gg~~a~~~~--~~al~~~gd~Vli 100 (346)
T TIGR03576 35 GFKIDEEDLELLETY--V--GPAIFEEKVQELGREHLGGP------EEKILV--FNRTSSAILAT--ILALEPPGRKVVH 100 (346)
T ss_pred ChhHHHHHHHHHHHh--c--CCHHHHHHHHHHHHHHcCCC------cceEEE--ECCHHHHHHHH--HHHhCCCCCEEEE
Confidence 566777766665431 1 23345678888888886432 689998 99999999997 5556779999997
Q ss_pred c---CCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHH
Q 012238 183 S---SPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQ 259 (467)
Q Consensus 183 ~---~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~ 259 (467)
+ .|+|..|...++..|++++.+ .|++.++. . ++++++++ +++||+|.+++.+++++|+++|+
T Consensus 101 ~~~d~p~~~s~~~~~~l~ga~~~~~---------~~l~~l~~-~----~~~~lIii-tg~s~~G~v~~~~~L~~i~~la~ 165 (346)
T TIGR03576 101 YLPEKPAHPSIPRSCKLAGAEYFES---------DELSELKK-I----DGTSLVVI-TGSTMDLKVVSEEDLKRVIKQAK 165 (346)
T ss_pred CCCCCCCchhHHHHHHHcCCEEecc---------CCHHHHhh-C----cCceEEEE-ECCCCCCcccCHHHHHHHHHHHH
Confidence 5 478888988999999875322 23444322 1 34566666 45799999999999999999999
Q ss_pred hcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecCCHHHHhhhhhhhHHHHHH
Q 012238 260 EKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKS 339 (467)
Q Consensus 260 ~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~ 339 (467)
++|+++|+||+|..+..+..... +. ...+.+ +++.|||| +++|+|+||++ +++++++.
T Consensus 166 ~~~~~livDEAy~~~~~~~~~~~--~~---~~~~~d-ivv~s~SK--alaG~r~G~v~---~~~~li~~----------- 223 (346)
T TIGR03576 166 SKEAIVLVDDASGARVRRLYGQP--PA---LDLGAD-LVVTSTDK--LMDGPRGGLLA---GRKELVDK----------- 223 (346)
T ss_pred HcCCEEEEECCccccccccCCCC--CH---HHcCCc-EEEeccch--hccccceEEEE---eCHHHHHH-----------
Confidence 99999999999987654311111 11 122233 66789999 67899999995 88888887
Q ss_pred HHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceEEecC
Q 012238 340 QLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTG 419 (467)
Q Consensus 340 ~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~~~g~f~~~~ 419 (467)
+.+..+++..+.+...|.++..+|+... .+..++.++++++.+.+.+. .++ +.++.++ |+|++
T Consensus 224 -l~~~~~~~~~s~~~~~~~aa~~aL~~~~--------~~~~~~~l~~r~~~~~~~l~-~~~------~~~~~~~-f~~~~ 286 (346)
T TIGR03576 224 -IKSVGEQFGLEAQAPLLAAVVRALEEFE--------LSRIRDAFKRKEEVYLRLFD-KLN------VERTPTG-FVIKG 286 (346)
T ss_pred -HHHhhcCcccCccHHHHHHHHHHHhhcc--------HHHHHHHHHHHHHHHHHHHH-hCC------CCcCCCe-EEEEe
Confidence 7666665444456667778877775421 23567788888888887776 543 3344555 78886
Q ss_pred CC----HHHHHHHHHcccEEEeCC-------C--eEEeccCChh---hHHHHHHHHHHHHH
Q 012238 420 LN----KAQSDNMTNKWHVYMTKD-------G--RISLAGLSLA---KCEYLADAIIDSYH 464 (467)
Q Consensus 420 l~----~~~~~~ll~~~gI~v~~g-------g--Ris~~~~~~~---~i~~~~~~l~~~l~ 464 (467)
++ .+++.++++++||.++|+ | |||++. .++ ++++++++|++.++
T Consensus 287 ~~~~~~~~~~~~ll~~~gV~v~~~~~f~~~~~~vRis~~~-~~~~~~~~~~~~~al~~~~~ 346 (346)
T TIGR03576 287 VEEEKLIEIGLDLLRNYGIITITAVGMPGASKTLRFDLAA-KDAERIGDDYLVEAVKDSLK 346 (346)
T ss_pred CCCCCHHHHHHHHHHhCCEEEeCCcccCCCCCeEEEEEec-ChHHhcCHHHHHHHHHhccC
Confidence 63 367889999899999995 2 999997 444 79999999988653
No 116
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.96 E-value=4.8e-26 Score=229.66 Aligned_cols=325 Identities=11% Similarity=0.099 Sum_probs=221.3
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCc---ch----HHHHHHHHHHHhCCCCcccccCceee
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIE---GL----AAFNKVTAELLFGADNSVLKEQRVAT 154 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~---G~----~~lr~aia~~l~~~~~~~~~~~~i~~ 154 (467)
+.++|||+.|+|. +++. +|.++++..+.+.... ..|.+.. |. .++++++|+++.. +++++
T Consensus 37 g~~~i~~~~~~~l---g~~~-~~~v~~~~~~~~~~~~-~~~~~s~~~~G~~~~~~~le~~ia~~~g~--------~~~ii 103 (393)
T TIGR01822 37 GREVLNFCANNYL---GLSS-HPDLIQAAKDALDEHG-FGMSSVRFICGTQDIHKELEAKIAAFLGT--------EDTIL 103 (393)
T ss_pred CceEEEeeCCCcc---ccCC-CHHHHHHHHHHHHHhC-CCCCCcCcccCChHHHHHHHHHHHHHhCC--------CcEEE
Confidence 4579999999874 4443 6678888777775421 3555544 65 8899999999754 35666
Q ss_pred eecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcC---CCCcE
Q 012238 155 VQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA---PGGSF 231 (467)
Q Consensus 155 ~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~---~~~~~ 231 (467)
+.||++|+..+ +...+.+||.|+++.|+|+.+...++..+.+.+.++ .+|++.+++.+++. ..+++
T Consensus 104 --~~~~~~a~~~~--~~~l~~~gd~vi~~~~~~~s~~~~~~~~~~~~~~~~-------~~d~~~l~~~i~~~~~~~~~~~ 172 (393)
T TIGR01822 104 --YASCFDANGGL--FETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYA-------NNDMADLEAQLKEARAAGARHR 172 (393)
T ss_pred --ECchHHHHHHH--HHHhCCCCCEEEEeccccHHHHHHHHhcCCceEEeC-------CCCHHHHHHHHHhhhhcCCCce
Confidence 68899999987 444577999999999999999998888887765442 37999999998752 12778
Q ss_pred EEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhc-CCeEEEEecCccCcccCC
Q 012238 232 ILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR-GMELLVAQSYSKNLGLYA 310 (467)
Q Consensus 232 ~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~S~SK~~~~~G 310 (467)
++++++++||||.+.+ +++|+++|++||+++|+||+|.....+. ........... .+.+++++|+||.+ +|
T Consensus 173 ~v~~~~v~~~tG~~~~---l~~i~~la~~~~~~li~De~~~~g~~~~---~~~~~~~~~~~~~~~di~~~s~sK~l--~g 244 (393)
T TIGR01822 173 LIATDGVFSMDGVIAP---LDEICDLADKYDALVMVDECHATGFLGP---TGRGSHELCGVMGRVDIITGTLGKAL--GG 244 (393)
T ss_pred EEEEeCCccCCCCcCC---HHHHHHHHHHcCCEEEEECCccccCcCC---CCCchHHhcCCCCCCeEEEEEChHHh--hC
Confidence 8898989999999877 4577778999999999999985222221 11111112121 23568899999986 47
Q ss_pred CccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCc-cCC-CchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHH
Q 012238 311 ERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPM-YSN-PPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVR 388 (467)
Q Consensus 311 ~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~-~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r 388 (467)
+|+||++ +++++++. +....... ..+ .+...+.++..+|.. .+..+++++++++++
T Consensus 245 ~r~G~~~---~~~~~~~~------------l~~~~~~~~~~~~~~~~~~~a~~~al~~-------~~~~~~~~~~~~~~~ 302 (393)
T TIGR01822 245 ASGGFTT---ARKEVVEL------------LRQRSRPYLFSNSLPPAVVGASIKVLEM-------LEASNELRDRLWANT 302 (393)
T ss_pred CCcEEEE---eCHHHHHH------------HHHhCccceecCCCCHHHHHHHHHHHHH-------HhcCHHHHHHHHHHH
Confidence 8999985 78888877 44332222 222 233333333333321 122456788899999
Q ss_pred HHHHHHhhhccCCCCCcccccCCcceEEec--C-C-CHHHHHHHHHcccEEEeC-------CC----eEEeccC-ChhhH
Q 012238 389 QKLFDSLSAKDKSGKDWSFILRQIGMFSFT--G-L-NKAQSDNMTNKWHVYMTK-------DG----RISLAGL-SLAKC 452 (467)
Q Consensus 389 ~~l~~~l~~~~g~~~~~~~~~~~~g~f~~~--~-l-~~~~~~~ll~~~gI~v~~-------gg----Ris~~~~-~~~~i 452 (467)
+++.+.|+ +.| +.+..+.+.++.+. + . ..++.+.|+++ ||.+.. .+ ||+++.. +++++
T Consensus 303 ~~l~~~L~-~~g----~~~~~~~~~~~~i~~~~~~~~~~l~~~L~~~-gI~v~~~~~~~~~~~~~~iRis~~~~~t~edi 376 (393)
T TIGR01822 303 RYFRERME-AAG----FDIKPADHPIIPVMLYDAVLAQRFARRLLEE-GIYVTGFFYPVVPKGQARIRVQISAAHTEEQL 376 (393)
T ss_pred HHHHHHHH-HcC----CCCCCCCCCEEEEEeCCHHHHHHHHHHHHHC-CeeEeeeCCCCCCCCCceEEEEECCCCCHHHH
Confidence 99999998 776 34444445544322 1 1 23456666665 998862 12 7776543 68999
Q ss_pred HHHHHHHHHHHHhc
Q 012238 453 EYLADAIIDSYHNV 466 (467)
Q Consensus 453 ~~~~~~l~~~l~~~ 466 (467)
++++++|+++.+++
T Consensus 377 ~~~~~~l~~~~~~~ 390 (393)
T TIGR01822 377 DRAVEAFTRIGREL 390 (393)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999987754
No 117
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.96 E-value=2.4e-26 Score=232.09 Aligned_cols=330 Identities=13% Similarity=0.088 Sum_probs=222.9
Q ss_pred CCCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcC---CCCcchHHHHHHHHHHHhCCCCcccccCceeeeec
Q 012238 81 TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEY---LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQG 157 (467)
Q Consensus 81 ~~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y---~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t 157 (467)
.+.+.|||+.|.|. +++. ++.+.+++.+.+.... ..| ....|.+++++++++++...++. +++|++ |
T Consensus 40 ~g~~~i~l~~~~~~---~~~~-~~~i~~a~~~~~~~~~-~~~~~~~~~~G~~~l~~~l~~~la~~~g~---~~~i~~--t 109 (397)
T PRK06939 40 DGKEVINFCANNYL---GLAN-HPELIAAAKAALDSHG-FGMASVRFICGTQDLHKELEEKLAKFLGT---EDAILY--S 109 (397)
T ss_pred CCCeEEEeeccCcc---ccCC-CHHHHHHHHHHHHHcC-CCCcccccccCCcHHHHHHHHHHHHHhCC---CcEEEE--c
Confidence 35679999999752 4543 6778888888775421 233 23468877777777776655442 356776 6
Q ss_pred CCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcC---CCCcEEEE
Q 012238 158 LSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA---PGGSFILL 234 (467)
Q Consensus 158 ~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~---~~~~~~i~ 234 (467)
+| ++++..+ +...+.|||.|++++|+|+.+...++..|++++.++. .|++.+++.+++. ..++++++
T Consensus 110 sG-~~a~~~~--~~~l~~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~i~~~~~~~~~~~~v~ 179 (397)
T PRK06939 110 SC-FDANGGL--FETLLGKEDAIISDALNHASIIDGVRLCKAKRYRYAN-------NDMADLEAQLKEAKEAGARHKLIA 179 (397)
T ss_pred Ch-HHHHHHH--HHHhCCCCCEEEEEhhhhHHHHHHHHhcCCceEEeCC-------CCHHHHHHHHHhhhccCCCCeEEE
Confidence 66 7777776 4445779999999999999999999999998877654 5888898888642 23677888
Q ss_pred eCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhc-CCeEEEEecCccCcccCCCcc
Q 012238 235 HGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR-GMELLVAQSYSKNLGLYAERI 313 (467)
Q Consensus 235 i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~S~SK~~~~~G~Ri 313 (467)
..+.+||||... ++++|+++|++||++||+||+|.....+. ...... ..... ...+++++||||.++ |+|+
T Consensus 180 ~~~v~~~~G~~~---~~~~l~~la~~~~~~li~De~~~~g~~~~--~~~~~~-~~~~~~~~~~i~~~S~sK~~~--g~r~ 251 (397)
T PRK06939 180 TDGVFSMDGDIA---PLPEICDLADKYDALVMVDDSHAVGFVGE--NGRGTV-EHFGVMDRVDIITGTLGKALG--GASG 251 (397)
T ss_pred EecCcCCCCCcC---CHHHHHHHHHHhCCEEEEECcccccCcCC--CCCCHH-HHcCCCCCCcEEEEECHHHhC--ccCc
Confidence 778899999854 46688888999999999999995221221 011111 11121 134699999999984 5699
Q ss_pred ceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCc-cCCC-chHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHH
Q 012238 314 GAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPM-YSNP-PVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKL 391 (467)
Q Consensus 314 G~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~-~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l 391 (467)
||++ +++++++. +....... ..+. +...+.++..+++. .+...+.+++++++++.+
T Consensus 252 G~v~---~~~~~~~~------------l~~~~~~~~~~~~~~~~~~~a~~~al~~-------~~~~~~~~~~~~~~~~~l 309 (397)
T PRK06939 252 GYTA---GRKEVIDW------------LRQRSRPYLFSNSLAPAIVAASIKVLEL-------LEESDELRDRLWENARYF 309 (397)
T ss_pred eEEE---eCHHHHHH------------HHHhCccccccCCCCHHHHHHHHHHHHH-------HhcCHHHHHHHHHHHHHH
Confidence 9995 77888777 44332221 2222 22223333333321 111246778899999999
Q ss_pred HHHhhhccCCCCCcccccCCcceEEec-C--C-CHHHHHHHHHcccEEEeCC-------C----eEEecc-CChhhHHHH
Q 012238 392 FDSLSAKDKSGKDWSFILRQIGMFSFT-G--L-NKAQSDNMTNKWHVYMTKD-------G----RISLAG-LSLAKCEYL 455 (467)
Q Consensus 392 ~~~l~~~~g~~~~~~~~~~~~g~f~~~-~--l-~~~~~~~ll~~~gI~v~~g-------g----Ris~~~-~~~~~i~~~ 455 (467)
.+.|+ +++ ++...+.++++.+. + . +.++.++++++ ||.+.++ + ||+++. .++++++++
T Consensus 310 ~~~L~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~-gI~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~ 383 (397)
T PRK06939 310 REGMT-AAG----FTLGPGEHPIIPVMLGDAKLAQEFADRLLEE-GVYVIGFSFPVVPKGQARIRTQMSAAHTKEQLDRA 383 (397)
T ss_pred HHHHH-HcC----CCcCCCCCCEEEEEECCHHHHHHHHHHHHHC-CceEeeeCCCCCCCCCceEEEEECCCCCHHHHHHH
Confidence 99998 776 45555666766433 2 1 23456777765 9988642 1 888754 488999999
Q ss_pred HHHHHHHHHhc
Q 012238 456 ADAIIDSYHNV 466 (467)
Q Consensus 456 ~~~l~~~l~~~ 466 (467)
+++|+++++++
T Consensus 384 l~~L~~~~~~~ 394 (397)
T PRK06939 384 IDAFEKVGKEL 394 (397)
T ss_pred HHHHHHHHHHh
Confidence 99999998865
No 118
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.96 E-value=4e-26 Score=227.34 Aligned_cols=318 Identities=14% Similarity=0.043 Sum_probs=215.4
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhc-CC-CCcC----CCCcchHHHHHHHHHHHhCCCCcccccCceeee
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-GE-NKEY----LPIEGLAAFNKVTAELLFGADNSVLKEQRVATV 155 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~-~~-~~~Y----~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~ 155 (467)
+.+.|||+.|.|. +.+. ++.+.+++.+.+.. +. ...| .......++++++++++.. ++.|++
T Consensus 15 g~~~id~~~~~~~---g~~~-~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~-------~~~i~~- 82 (360)
T TIGR00858 15 GRRLLNFSSNDYL---GLAS-HPEVIQAAQQGAEQYGAGSTASRLVSGNSPLHEELEEELAEWKGT-------EAALLF- 82 (360)
T ss_pred CceEEecccCCcc---cCCC-CHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhCC-------CCEEEE-
Confidence 4579999999652 3333 67788888887743 11 0112 1223466799999998642 456766
Q ss_pred ecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCC-CCcEEEE
Q 012238 156 QGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP-GGSFILL 234 (467)
Q Consensus 156 ~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~-~~~~~i~ 234 (467)
++| ++++..+ +...+.+||+|+++.|+|..+...++..|++++.++. +|++.+++.+++.. .++++++
T Consensus 83 -~~G-~~~~~~~--l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~~~~~~~~~~~~v~ 151 (360)
T TIGR00858 83 -SSG-YLANVGV--ISALVGKGDLILSDALNHASLIDGCRLSGARVRRYRH-------NDVEHLERLLEKNRGERRKLIV 151 (360)
T ss_pred -Cch-HHHHHHH--HHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEecC-------CCHHHHHHHHHHcccCCCeEEE
Confidence 665 5555444 3344679999999999999999999999999887764 68899999887532 3578888
Q ss_pred eCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHH--hcCCeEEEEecCccCcccCCCc
Q 012238 235 HGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFA--TRGMELLVAQSYSKNLGLYAER 312 (467)
Q Consensus 235 i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~S~SK~~~~~G~R 312 (467)
+++++||||...+. ++|.++|+++|++||+||+|..+.++. +..+..... ...+++|+++||||.|+++|
T Consensus 152 ~~~~~~~~G~~~~~---~~i~~l~~~~~~~li~De~~~~~~~~~---~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~g-- 223 (360)
T TIGR00858 152 TDGVFSMDGDIAPL---PQLVALAERYGAWLMVDDAHGTGVLGE---DGRGTLEHFGLKPEPVDIQVGTLSKALGSYG-- 223 (360)
T ss_pred EeCCccCCCCCcCH---HHHHHHHHHcCcEEEEECcccccCcCC---CCCchHHhcCCCccCCcEEEEechhhhhccC--
Confidence 99999999987775 577777999999999999997655432 111111111 22357899999999999877
Q ss_pred cceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCc--cCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHH
Q 012238 313 IGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPM--YSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQK 390 (467)
Q Consensus 313 iG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~ 390 (467)
||++ +++++++. +....... ..+.+...+.++..+++. .....+.++++++++++
T Consensus 224 -G~~~---~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~a~~~al~~-------~~~~~~~~~~~~~~~~~ 280 (360)
T TIGR00858 224 -AYVA---GSQALIDY------------LINRARTLIFSTALPPAVAAAALAALEL-------IQEEPWRREKLLALIAR 280 (360)
T ss_pred -cEEE---cCHHHHHH------------HHHhCccceecCCCCHHHHHHHHHHHHH-------HhhCHHHHHHHHHHHHH
Confidence 9985 77777776 44332221 122344433344444421 11234678899999999
Q ss_pred HHHHhhhccCCCCCcccccCCcceEEecCCC-----HHHHHHHHHcccEEEeCC-------C----eEEecc-CChhhHH
Q 012238 391 LFDSLSAKDKSGKDWSFILRQIGMFSFTGLN-----KAQSDNMTNKWHVYMTKD-------G----RISLAG-LSLAKCE 453 (467)
Q Consensus 391 l~~~l~~~~g~~~~~~~~~~~~g~f~~~~l~-----~~~~~~ll~~~gI~v~~g-------g----Ris~~~-~~~~~i~ 453 (467)
+.+.|+ +++ +.+.++ ++.|+|+.+. .++.++++ ++||.+.++ | ||+++. .++++++
T Consensus 281 l~~~L~-~~~----~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~-~~gI~v~~~~~~~~~~~~~~iRis~~~~~~~~~i~ 353 (360)
T TIGR00858 281 LRAGLE-ALG----FTLMPS-CTPIVPVIIGDNASALALAEELQ-QQGIFVGAIRPPTVPAGTSRLRLTLSAAHTPGDID 353 (360)
T ss_pred HHHHHH-HcC----CccCCC-CCCEEEEEeCCHHHHHHHHHHHH-HCCeeEeeeCCCCCCCCCceEEEEEcCCCCHHHHH
Confidence 999999 776 455444 4557766442 24455555 469999642 2 999874 3779999
Q ss_pred HHHHHHH
Q 012238 454 YLADAII 460 (467)
Q Consensus 454 ~~~~~l~ 460 (467)
+++++|+
T Consensus 354 ~~l~~l~ 360 (360)
T TIGR00858 354 RLAEALK 360 (360)
T ss_pred HHHHhhC
Confidence 9998773
No 119
>PLN02721 threonine aldolase
Probab=99.95 E-value=8.2e-26 Score=224.62 Aligned_cols=324 Identities=15% Similarity=0.107 Sum_probs=207.6
Q ss_pred CcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhH
Q 012238 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 163 (467)
Q Consensus 84 ~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a 163 (467)
++++|+.+.+ .. +++.+.+++.+.........| .....+||+++++++... .+++ +.+|+++
T Consensus 6 ~~~~~~~~~~----~~--~~~~~~~a~~~~~~~~~~~~~--~~~~~~l~~~la~~~~~~--------~~~~--~~~Gs~a 67 (353)
T PLN02721 6 RVVDLRSDTV----TK--PTDAMRAAMANAEVDDDVLGY--DPTALRLEEEMAKIFGKE--------AALF--VPSGTMG 67 (353)
T ss_pred hhhhhhcccc----cC--CCHHHHHHHHhccCCCcccCC--CHHHHHHHHHHHHHhCCc--------eeEE--ecCccHH
Confidence 6789998877 33 367888888764111112333 334789999999997542 3445 5667777
Q ss_pred HHHHHHHHHHhC-CCCEEEEcCCCCcchHH---HHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcC----CCCcEEEEe
Q 012238 164 LRLAAALIERYF-PGAKVLISSPTWGNHKN---IFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA----PGGSFILLH 235 (467)
Q Consensus 164 l~l~~~~l~~~~-~gd~Vlv~~P~y~~~~~---~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~----~~~~~~i~i 235 (467)
..++ +...+. +||+|++++|+|..... .+...|++++.++.+ +++.+|++.+++.+++. .++++++++
T Consensus 68 ~~~~--l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~~~~~~~v~l 143 (353)
T PLN02721 68 NLIS--VLVHCDVRGSEVILGDNSHIHLYENGGISTLGGVHPRTVKNN--EDGTMDLDAIEAAIRPKGDDHFPTTRLICL 143 (353)
T ss_pred HHHH--HHHHccCCCCeEEEcCccceehhcccchhhhcCceeEecCCC--cCCCcCHHHHHHHHHhccCCCCCcceEEEE
Confidence 6554 344466 89999999999854433 567889999999873 45679999999999732 135677777
Q ss_pred CC-CCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccc
Q 012238 236 GC-AHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIG 314 (467)
Q Consensus 236 ~~-p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG 314 (467)
++ +|||||.+++.+++++|+++|+++|+++|+|++|..........+ ...+....+ .++.|+||.++. ++|
T Consensus 144 ~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~~~---~~~~~~~~d--~~~~s~sK~l~~---~~G 215 (353)
T PLN02721 144 ENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVALGVP---VHRLVKAAD--SVSVCLSKGLGA---PVG 215 (353)
T ss_pred eccccccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhCCC---HHHHhhhCC--EEEEecccccCC---cee
Confidence 55 688999999999999999999999999999999753221100011 112222222 345579999874 367
Q ss_pred eEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012238 315 AMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDS 394 (467)
Q Consensus 315 ~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~ 394 (467)
|++ .+++++++. +..........++..++.++..+. .+ ++.++.+ ++..++++.+.+.
T Consensus 216 ~~~--~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~---~l----~~~~~~~-~~~~~~~~~l~~~ 273 (353)
T PLN02721 216 SVI--VGSKSFIRK------------AKRLRKTLGGGMRQVGVLAAAALV---AL----QENVPKL-EDDHKKAKLLAEG 273 (353)
T ss_pred eEE--ecCHHHHHh------------HHHHHHhcCCCeehhHHHHHHHHH---HH----HHHHHHH-HHHHHHHHHHHHH
Confidence 743 478888776 333332222122222222221111 11 1222333 2334567888999
Q ss_pred hhhccCCCCCcc--cccCCcceEEecCC------CHH-HHHHHHHcccEEEeCCC----eEEec-cCChhhHHHHHHHHH
Q 012238 395 LSAKDKSGKDWS--FILRQIGMFSFTGL------NKA-QSDNMTNKWHVYMTKDG----RISLA-GLSLAKCEYLADAII 460 (467)
Q Consensus 395 l~~~~g~~~~~~--~~~~~~g~f~~~~l------~~~-~~~~ll~~~gI~v~~gg----Ris~~-~~~~~~i~~~~~~l~ 460 (467)
|+ +++. +. ...+.++ |+|+.+ +.+ +.++|. ++||.+.+++ ||+++ ..+++++++++++|+
T Consensus 274 L~-~~~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~L~-~~gi~v~~~~~~~lR~~~~~~~~~~~i~~~~~~l~ 347 (353)
T PLN02721 274 LN-QIKG---LRVNVAAVETN-IVYFDITDGSRITAEKLCKSLE-EHGVLLMPGNSSRIRVVTHHQISDSDVQYTLSCFQ 347 (353)
T ss_pred HH-hCCC---cEEecCCccce-EEEEEccCCccccHHHHHHHHH-hCCcEEecCCCceEEEEecCcCCHHHHHHHHHHHH
Confidence 98 7631 32 2344444 566533 233 355555 6799999986 99986 457899999999999
Q ss_pred HHHHh
Q 012238 461 DSYHN 465 (467)
Q Consensus 461 ~~l~~ 465 (467)
+++..
T Consensus 348 ~~~~~ 352 (353)
T PLN02721 348 QAALT 352 (353)
T ss_pred HHhhc
Confidence 98764
No 120
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.95 E-value=1.8e-25 Score=224.90 Aligned_cols=330 Identities=15% Similarity=0.132 Sum_probs=225.0
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhc-CC-CCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCC
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-GE-NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 159 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~-~~-~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g 159 (467)
+.+.|||+.|.+. +++. ++.+.+++.+.+.. +. ...|.+..|..++++.+++++....+. ++.+++ ++|
T Consensus 32 g~~~id~~~~~~~---g~~~-~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~~g~---~~~i~~--~sG 102 (385)
T TIGR01825 32 GKEVINLSSNNYL---GFAD-HPRLKEAAAQAIQQYGVGAGAVRTIAGTLRLHEELEEKLAKFKKT---EAALVF--QSG 102 (385)
T ss_pred CceEEEeeccCcc---CCCC-CHHHHHHHHHHHHHcCCCCCccCcccCCcHHHHHHHHHHHHHhCC---CcEEEE--CcH
Confidence 4589999998642 4544 67788888777653 21 245777889999999999998765442 345666 655
Q ss_pred chhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCC-CCcEEEEeCCC
Q 012238 160 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP-GGSFILLHGCA 238 (467)
Q Consensus 160 gt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~-~~~~~i~i~~p 238 (467)
++++.++ +...+.+||.|+++.|+|..+...++..|++++.++ .+|++.+++.+++.. +++++++++++
T Consensus 103 -~~a~~~a--~~~~~~~gd~vi~~~~~~~~~~~~~~~~g~~~~~~~-------~~d~~~l~~~l~~~~~~~~~~v~~~~v 172 (385)
T TIGR01825 103 -FNTNQGV--LSALLRKGDIVLSDELNHASIIDGLRLTKATKKIYK-------HADMDDLDRVLRENPSYGKKLIVTDGV 172 (385)
T ss_pred -HHHHHHH--HHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEeC-------CCCHHHHHHHHHhhccCCCeEEEEecC
Confidence 6666655 344577999999999999999888888888876653 378889988887532 36788888999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEE
Q 012238 239 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNV 318 (467)
Q Consensus 239 ~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~ 318 (467)
+||||.+.+. ++|.++|++||+++|+||+|..+.++..... ....+.-..+.++++.||||.++++| ||++
T Consensus 173 ~~~tG~~~~~---~~i~~l~~~~~~~li~De~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~s~sK~~~~~g---G~~~- 243 (385)
T TIGR01825 173 FSMDGDVAPL---PEIVELAERYGAVTYVDDAHGSGVMGEAGRG--TVHHFGLEDKVDIQVGTLSKAIGVVG---GYAA- 243 (385)
T ss_pred CcCCCCccCH---HHHHHHHHHhCCEEEEECcccccCcCCCCCc--cHhhcCCCcCCcEEEEeccHHhhcCC---CEEe-
Confidence 9999998875 5778889999999999999977654411111 11111112357899999999998766 9984
Q ss_pred ecCCHHHHhhhhhhhHHHHHHHHHhhccC-ccC-CCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 012238 319 VCSSSDLAARCCEVAVIQVKSQLKRLARP-MYS-NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLS 396 (467)
Q Consensus 319 v~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~-~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~ 396 (467)
+++++++. +...... ... ..+...+.++..+++.. .+ ..+..++++++++++.+.|+
T Consensus 244 --~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~a~~~al~~~------~~-~~~~~~~~~~~~~~l~~~L~ 302 (385)
T TIGR01825 244 --GHKELIEY------------LKNRARPFLFSTAQPPAVVAALAAAVDEL------QR-SPELMERLWDNTRFFKAGLG 302 (385)
T ss_pred --cCHHHHHH------------HHHhCccccccCCCCHHHHHHHHHHHHHH------hc-CHHHHHHHHHHHHHHHHHHH
Confidence 77877776 4433221 122 23444455555544311 00 12355667778999999998
Q ss_pred hccCCCCCcccccCCcceEEec-CC---CHHHHHHHHHcccEEEeCC-------C----eEEec-cCChhhHHHHHHHHH
Q 012238 397 AKDKSGKDWSFILRQIGMFSFT-GL---NKAQSDNMTNKWHVYMTKD-------G----RISLA-GLSLAKCEYLADAII 460 (467)
Q Consensus 397 ~~~g~~~~~~~~~~~~g~f~~~-~l---~~~~~~~ll~~~gI~v~~g-------g----Ris~~-~~~~~~i~~~~~~l~ 460 (467)
++| +++..+.+.++.+. +. +.++.+.++++ ||.+.+. | |++++ ..+++++++++++|+
T Consensus 303 -~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~-gi~v~~~~~~~~~~~~~~iRi~~~~~~~~e~i~~~~~~l~ 376 (385)
T TIGR01825 303 -KLG----YDTGGSETPITPVVIGDEKAAQEFSRRLFDE-GIFAQSIVFPTVPRGTARIRNIPTAEHTKDDLDQALDAYE 376 (385)
T ss_pred -HcC----CCCCCCCCCEEEEEECCHHHHHHHHHHHHHC-CcEEcccCCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHH
Confidence 776 45666665544322 21 23456777776 9988531 2 67653 348899999999999
Q ss_pred HHHHhc
Q 012238 461 DSYHNV 466 (467)
Q Consensus 461 ~~l~~~ 466 (467)
++++++
T Consensus 377 ~~~~~~ 382 (385)
T TIGR01825 377 KVGKEL 382 (385)
T ss_pred HHHHHh
Confidence 998764
No 121
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.95 E-value=7.8e-26 Score=228.62 Aligned_cols=325 Identities=16% Similarity=0.148 Sum_probs=218.2
Q ss_pred CcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCC-C-C--cCC----CCcchHHHHHHHHHHHhCCCCcccccCceeee
Q 012238 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-N-K--EYL----PIEGLAAFNKVTAELLFGADNSVLKEQRVATV 155 (467)
Q Consensus 84 ~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~-~-~--~Y~----~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~ 155 (467)
+.+.|..+ +..+.++.+.+++.+.+.... . . .+. .....+++|+.++++++.. ++++|++
T Consensus 19 ~~~yld~a------~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~-----~~~~i~~- 86 (401)
T PRK10874 19 AGVYLDSA------ATALKPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNAP-----DAKNIVW- 86 (401)
T ss_pred ceEEEeCC------cccCCCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCCC-----CCCEEEE-
Confidence 35655544 444457889999988774311 0 0 010 0223778999999997652 2788999
Q ss_pred ecCCchhHHHHHHHHHH--HhCCCCEEEEcCCCCcc----hHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCC
Q 012238 156 QGLSGTGSLRLAAALIE--RYFPGAKVLISSPTWGN----HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGG 229 (467)
Q Consensus 156 ~t~ggt~al~l~~~~l~--~~~~gd~Vlv~~P~y~~----~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 229 (467)
|+|+++++++++..+. .+.+||+|++++|.|+. +...++..|++++.++.+ .++.+|++.+++.++ ++
T Consensus 87 -~~~~t~~i~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~l~~~i~---~~ 160 (401)
T PRK10874 87 -TRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLG--ADRLPDVDLLPELIT---PR 160 (401)
T ss_pred -ECCHHHHHHHHHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEecC--CCCcCCHHHHHHhcC---cC
Confidence 9999999999743332 13689999999999854 556678899999999983 356789999999996 57
Q ss_pred cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccC
Q 012238 230 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY 309 (467)
Q Consensus 230 ~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~ 309 (467)
++++++++++||||.+++.+ +|+++|+++|+++|+|++|...... .+ + ......+++.|++|.+|++
T Consensus 161 t~lv~i~~~~n~tG~~~~~~---~i~~l~~~~g~~~ivD~a~~~g~~~---~~---~----~~~~~d~~~~s~~K~~gp~ 227 (401)
T PRK10874 161 TRILALGQMSNVTGGCPDLA---RAITLAHQAGMVVMVDGAQGAVHFP---AD---V----QALDIDFYAFSGHKLYGPT 227 (401)
T ss_pred cEEEEEeCCcccccCcCCHH---HHHHHHHHcCCEEEEECCccccccc---CC---c----hhcCCCEEEEecccccCCC
Confidence 88999999999999999865 6777799999999999997532221 11 1 1112357789999999987
Q ss_pred CCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhc---------------------cCccCCCchHHHHHHHHHhCChh
Q 012238 310 AERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLA---------------------RPMYSNPPVHGARIVANVVGNPA 368 (467)
Q Consensus 310 G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~---------------------~~~~~~~~~~~~~~~~~~L~~~~ 368 (467)
| +||++ .+++.++. +.... +.....++...+.++..++.
T Consensus 228 G--~G~l~---~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~--- 287 (401)
T PRK10874 228 G--IGVLY---GKSELLEA------------MSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALE--- 287 (401)
T ss_pred c--cEEEE---EchHHHhc------------CCCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHH---
Confidence 7 59986 56666665 22111 00111233334444444432
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-CCCCCccccc-CCcceEEec--CCCHHHHHHHHHcccEEEeCC-----
Q 012238 369 LFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD-KSGKDWSFIL-RQIGMFSFT--GLNKAQSDNMTNKWHVYMTKD----- 439 (467)
Q Consensus 369 ~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~-g~~~~~~~~~-~~~g~f~~~--~l~~~~~~~ll~~~gI~v~~g----- 439 (467)
+.. +....+..++.++.++++.+.|+ ++ | +.... +..+++.|. +++.+.+.+.|+++||.+.+|
T Consensus 288 ~l~--~~g~~~~~~~~~~l~~~l~~~l~-~~~g----~~~~~~~~~~i~~~~~~~~~~~~~~~~L~~~gI~v~~g~~~~~ 360 (401)
T PRK10874 288 WLA--DIDINQAESWSRSLATLAEDALA-KLPG----FRSFRCQDSSLLAFDFAGVHHSDLVTLLAEYGIALRAGQHCAQ 360 (401)
T ss_pred HHH--HhCHHHHHHHHHHHHHHHHHHHh-cCCC----EEEeCCCCCcEEEEEECCcCHHHHHHHHHHCCcEEeccccchH
Confidence 111 11234567778888899999988 65 3 44443 334433322 445555555566679998763
Q ss_pred ---------C--eEEeccC-ChhhHHHHHHHHHHHHHhc
Q 012238 440 ---------G--RISLAGL-SLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 440 ---------g--Ris~~~~-~~~~i~~~~~~l~~~l~~~ 466 (467)
| |||++.. +++++++++++|+++++.+
T Consensus 361 ~~~~~~g~~~~iRiS~~~~nt~edid~ll~al~~~~~~~ 399 (401)
T PRK10874 361 PLLAALGVTGTLRASFAPYNTQSDVDALVNAVDRALELL 399 (401)
T ss_pred HHHHHhCCCCEEEEEecccCCHHHHHHHHHHHHHHHHHh
Confidence 3 9998754 6689999999999988764
No 122
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.95 E-value=1.7e-25 Score=225.93 Aligned_cols=326 Identities=14% Similarity=0.110 Sum_probs=215.8
Q ss_pred CcEEecCcccCCCCCCCCchHHHHHHHHHHHhcC-CCCcCCCC-------cchHHHHHHHHHHHhCCCCcccccCceeee
Q 012238 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-ENKEYLPI-------EGLAAFNKVTAELLFGADNSVLKEQRVATV 155 (467)
Q Consensus 84 ~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~-~~~~Y~~~-------~G~~~lr~aia~~l~~~~~~~~~~~~i~~~ 155 (467)
+.+.|..+ +..++++.+.+++.+.+... ....+.+. ..++++|+.++++++.. ++++|++
T Consensus 16 ~~iyld~a------~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~-----~~~~i~~- 83 (398)
T TIGR03392 16 GTVYLDSA------ATALKPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLNAP-----DAENIVW- 83 (398)
T ss_pred CeEEeeCc------cccCCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCC-----CCCeEEE-
Confidence 35555554 34445788999988876421 11112221 23677999999997653 2678998
Q ss_pred ecCCchhHHHHHHHHHH--HhCCCCEEEEcCCCCcc----hHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCC
Q 012238 156 QGLSGTGSLRLAAALIE--RYFPGAKVLISSPTWGN----HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGG 229 (467)
Q Consensus 156 ~t~ggt~al~l~~~~l~--~~~~gd~Vlv~~P~y~~----~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 229 (467)
|+|+|+++++++..+. .+.+||+|++++|+|+. +...++..|++++.++.+ .++.+|++.+++.++ ++
T Consensus 84 -t~g~t~~l~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~--~~~~~~~~~l~~~i~---~~ 157 (398)
T TIGR03392 84 -TRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIG--ADLLPDIRQLPELLT---PR 157 (398)
T ss_pred -eCChHHHHHHHHHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecC--CCCCcCHHHHHHHhc---cC
Confidence 9999999999733321 14689999999999865 456678899999999984 346789999999987 57
Q ss_pred cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccC
Q 012238 230 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY 309 (467)
Q Consensus 230 ~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~ 309 (467)
++++++++++||||.+.+.+ +|+++|+++|+++++|++|...... .+ +. .. .-.+++.|++|.+|++
T Consensus 158 t~lv~i~~~~n~tG~~~~~~---~i~~~~~~~~~~~ivD~a~~~~~~~---~~---~~---~~-~~d~~~~s~~K~~gp~ 224 (398)
T TIGR03392 158 TRILALGQMSNVTGGCPDLA---RAITLAHQYGAVVVVDGAQGVVHGP---PD---VQ---AL-DIDFYAFSGHKLYGPT 224 (398)
T ss_pred ceEEEEECccccccccCCHH---HHHHHHHHcCCEEEEEhhhhcCCCC---CC---hh---hc-CCCEEEEecccccCCC
Confidence 88999999999999998865 6777799999999999997543221 11 11 11 2346788889999977
Q ss_pred CCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhc---------------------cCccCCCchHHHHHHHHHhCChh
Q 012238 310 AERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLA---------------------RPMYSNPPVHGARIVANVVGNPA 368 (467)
Q Consensus 310 G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~---------------------~~~~~~~~~~~~~~~~~~L~~~~ 368 (467)
| +||++ .+++.++. +.... +.....++.....++..+++
T Consensus 225 G--~G~l~---~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~--- 284 (398)
T TIGR03392 225 G--IGVLY---GKTELLEA------------MPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALE--- 284 (398)
T ss_pred c--eEEEE---EcHHHHhh------------CCCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHH---
Confidence 7 79996 56666655 21110 00011223223333333332
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccccc-CCcceEEec--CCCHHHHHHHHHcccEEEeCC------
Q 012238 369 LFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFIL-RQIGMFSFT--GLNKAQSDNMTNKWHVYMTKD------ 439 (467)
Q Consensus 369 ~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~-~~~g~f~~~--~l~~~~~~~ll~~~gI~v~~g------ 439 (467)
+.. +..++++.++.++.++++.+.|+ ++. + +.... +..+++.|. +.+.+.+.+.|+++||.+..|
T Consensus 285 ~l~--~~g~~~i~~~~~~l~~~l~~~l~-~l~--g-~~~~~~~~~~i~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~ 358 (398)
T TIGR03392 285 WLT--DIDIAAAEAWSVSLADLAEERLA-QLP--G-FRSFRCPGSSLLAFDFAGVHHSDLAALLAESGIALRAGQHCAQP 358 (398)
T ss_pred HHH--HhCHHHHHHHHHHHHHHHHHHHh-cCC--C-eEEeCCCCCcEEEEEeCCcCHHHHHHHHHhCCEEEecCccchHH
Confidence 111 11244667777888888998887 652 1 34333 333433322 445555555556679998753
Q ss_pred --------C--eEEeccC-ChhhHHHHHHHHHHHHHhc
Q 012238 440 --------G--RISLAGL-SLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 440 --------g--Ris~~~~-~~~~i~~~~~~l~~~l~~~ 466 (467)
| |||+... +++++++++++|+++++.+
T Consensus 359 ~~~~~g~~~~iRvS~~~~~t~~ei~~l~~~l~~~~~~~ 396 (398)
T TIGR03392 359 LMAALGVSGTLRASFAPYNTQQDVDALVDAVGAALELL 396 (398)
T ss_pred HHHHhCCCCEEEEEeeccCCHHHHHHHHHHHHHHHHHh
Confidence 3 9998654 6799999999999998764
No 123
>PLN02822 serine palmitoyltransferase
Probab=99.95 E-value=7.2e-26 Score=232.02 Aligned_cols=326 Identities=12% Similarity=0.063 Sum_probs=228.3
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhc-CC-----CCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeee
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-GE-----NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATV 155 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~-~~-----~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~ 155 (467)
+.+.|||+.|.+.+ +.. ++.++++..+.+.. +. ...|.+..+..+|++++++++.. ++.|++
T Consensus 108 G~~~id~~s~~~lg---l~~-~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~~~-------~~~i~~- 175 (481)
T PLN02822 108 GKDVVNFASANYLG---LIG-NEKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKFLGT-------PDSILY- 175 (481)
T ss_pred CceEEEeECCCcCC---CCC-CHHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHHhCC-------CCEEEE-
Confidence 45789999998743 333 67788888887754 21 12467778899999999999753 567887
Q ss_pred ecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHc---C---CCC
Q 012238 156 QGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKA---A---PGG 229 (467)
Q Consensus 156 ~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~---~---~~~ 229 (467)
+.|++ ++..+ +.+.+.+||.|++...++..+...++..|.+++.++.. |.+.++..+++ . .++
T Consensus 176 -s~G~~-a~~sa--i~a~~~~gd~Ii~d~~~H~s~~~~~~ls~~~~~~~~~n-------d~~~l~~~l~~~~~~~~~~~~ 244 (481)
T PLN02822 176 -SYGLS-TIFSV--IPAFCKKGDIIVADEGVHWGIQNGLYLSRSTIVYFKHN-------DMESLRNTLEKLTAENKRKKK 244 (481)
T ss_pred -CCHHH-HHHHH--HHHhCCCCCEEEEeCCccHHHHHHHHHcCCeEEEECCC-------CHHHHHHHHHHHhhhhcccCC
Confidence 77766 45554 34456799999988777777777888889998888763 34444444432 1 122
Q ss_pred c-EEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHh--cCCeEEEEecCccCc
Q 012238 230 S-FILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT--RGMELLVAQSYSKNL 306 (467)
Q Consensus 230 ~-~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~S~SK~~ 306 (467)
+ +++++..++|+||.+++ +++|+++|++||+++|+||+|....++.... .+..... ..+..++++||||.+
T Consensus 245 ~~~~Ivve~i~~~~G~i~~---L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~---G~~e~~~v~~~~~dii~~s~sKal 318 (481)
T PLN02822 245 LRRYIVVEAIYQNSGQIAP---LDEIVRLKEKYRFRVLLDESNSFGVLGKSGR---GLSEHFGVPIEKIDIITAAMGHAL 318 (481)
T ss_pred CcEEEEEecCCCCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCCCC---ChHHHcCCCCCCCeEEEecchhhh
Confidence 3 78888999999999999 5678888999999999999998555542111 1111111 124578899999999
Q ss_pred ccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCc-cC-CCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q 012238 307 GLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPM-YS-NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRI 384 (467)
Q Consensus 307 ~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~-~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~ 384 (467)
|++| ||++ +++++++. ++...... ++ +.|...+.++..+|+.. +...+.++++
T Consensus 319 g~~G---G~i~---g~~~ii~~------------~~~~~~~~~fsa~lPp~~~~Aa~~aL~~l-------~~~~~~~~~l 373 (481)
T PLN02822 319 ATEG---GFCT---GSARVVDH------------QRLSSSGYVFSASLPPYLASAAITAIDVL-------EDNPSVLAKL 373 (481)
T ss_pred hhCC---eEEE---cCHHHHHH------------HHhcCCceeeccccCHHHHHHHHHHHHHH-------HhCHHHHHHH
Confidence 9988 9985 88888876 44333222 32 34566666665565321 1124677889
Q ss_pred HHHHHHHHHHhhhcc-CCCCCcccccCCcceEEecCCC-------------HHHHHHHHHcccEEEeCC-----------
Q 012238 385 KNVRQKLFDSLSAKD-KSGKDWSFILRQIGMFSFTGLN-------------KAQSDNMTNKWHVYMTKD----------- 439 (467)
Q Consensus 385 ~~~r~~l~~~l~~~~-g~~~~~~~~~~~~g~f~~~~l~-------------~~~~~~ll~~~gI~v~~g----------- 439 (467)
+++++++.+.|+ +. | +.+..+.+++++++.+. .+++++|++++||++.++
T Consensus 374 ~~~~~~l~~~L~-~~~g----~~~~~~~~spi~~l~l~~~~~~~~~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~ 448 (481)
T PLN02822 374 KENIALLHKGLS-DIPG----LSIGSNTLSPIVFLHLEKSTGSAKEDLSLLEHIADRMLKEDSVLVVVSKRSTLDKCRLP 448 (481)
T ss_pred HHHHHHHHHHHH-hcCC----cccCCCCCCCEEEEEeCCCcccccchHHHHHHHHHHHHhcCCEEEEeeCCCCcCCCCCC
Confidence 999999999998 65 4 45555667777766431 245778886789999864
Q ss_pred -C-eEEecc-CChhhHHHHHHHHHHHHHhc
Q 012238 440 -G-RISLAG-LSLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 440 -g-Ris~~~-~~~~~i~~~~~~l~~~l~~~ 466 (467)
+ ||+++. .++++|++++++|++++.++
T Consensus 449 ~~lRi~is~~~t~edI~~~~~~l~~~~~~~ 478 (481)
T PLN02822 449 VGIRLFVSAGHTESDILKASESLKRVAASV 478 (481)
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHHHHHHH
Confidence 1 887653 38899999999999998764
No 124
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.95 E-value=1.3e-25 Score=225.32 Aligned_cols=332 Identities=13% Similarity=0.064 Sum_probs=215.5
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCC--CCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCC
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE--NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 159 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~--~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g 159 (467)
+.+.|||..|...+.-+. .+|.+.+++.+.+.... ...| +..-..+|.+.+++++ + .+++++ ++|
T Consensus 26 g~~~id~~~~~~~~~lG~--~~p~v~~a~~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~-g-------~~~~~~--~~s 92 (379)
T TIGR00707 26 GKEYLDFVAGIAVNSLGH--AHPKLVEALKEQLEKLVHVSNLY-YTEPQEELAEKLVEHS-G-------ADRVFF--CNS 92 (379)
T ss_pred CCEEEEcCcchhhccCCC--CCHHHHHHHHHHHhhcccccccc-CCHHHHHHHHHHHhhC-C-------CCEEEE--eCC
Confidence 347899999855332232 36788888888775421 1234 4445667777777774 2 248888 999
Q ss_pred chhHHHHHHHHHHHhC-----CCCEEEEcCCCCcchHHHHhhCCCCeEE----eeeecCCCCC--CChhhHHHHHHcCCC
Q 012238 160 GTGSLRLAAALIERYF-----PGAKVLISSPTWGNHKNIFNDARVPWSE----YRYYDPKTVG--LDFEGMIADIKAAPG 228 (467)
Q Consensus 160 gt~al~l~~~~l~~~~-----~gd~Vlv~~P~y~~~~~~~~~~G~~~~~----v~~~~~~~~~--~d~~~l~~~l~~~~~ 228 (467)
|++++.++.+++.... +||+|++++|+|..+...+...+..... .++..+..+. .|++.+++.+. +
T Consensus 93 g~~a~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~---~ 169 (379)
T TIGR00707 93 GAEANEAALKLARKYTGDKGKEKKKIIAFENSFHGRTMGALSATGQPKYQKGFEPLVPGFSYAPYNDIESLKKAID---D 169 (379)
T ss_pred cHHHHHHHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHHHhcCChhhhccCCCCCCCceeeCCCCHHHHHHHhh---h
Confidence 9999999855443222 3799999999998887766655554321 2221111111 28899999887 4
Q ss_pred CcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcc
Q 012238 229 GSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG 307 (467)
Q Consensus 229 ~~~~i~i~~p~NPTG~~-~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 307 (467)
++++++++.++||+|.. ++.+++++|.++|+++|+++|+||+|.++.+.+ ...+. ......++++ +|||.++
T Consensus 170 ~~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g---~~~~~-~~~~~~~d~~---t~sK~~~ 242 (379)
T TIGR00707 170 ETAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTG---KFFAY-EHYGIEPDII---TLAKGLG 242 (379)
T ss_pred CeeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccc---hhhhH-HhcCCCCCEE---EEccccc
Confidence 66788877777777764 689999999999999999999999998876532 11111 1112223433 6899999
Q ss_pred cCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHH
Q 012238 308 LYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNV 387 (467)
Q Consensus 308 ~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~ 387 (467)
+|+|+||++ +++++++. +.........+.+.+.|.++..+|+.-. -.+..++++++
T Consensus 243 -~G~riG~~~---~~~~~~~~------------~~~~~~~~~~~~~~~~~~aa~aaL~~~~--------~~~~~~~~~~~ 298 (379)
T TIGR00707 243 -GGVPIGATL---AKEEVAEA------------FTPGDHGSTFGGNPLACAAALAVLEVIE--------KERLLENVKEK 298 (379)
T ss_pred -CCcccEEEE---EcHHHHhh------------hcCCCCCCCCCCCHHHHHHHHHHHHHHH--------hhhHHHHHHHH
Confidence 999999995 67777776 5543333334567778888877664210 11344556666
Q ss_pred HHHHHHHhhhccCCCCCcccccCCcceEEecCC--CH-HHHHHHHHcccEEEeCCC----eEEecc-CChhhHHHHHHHH
Q 012238 388 RQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL--NK-AQSDNMTNKWHVYMTKDG----RISLAG-LSLAKCEYLADAI 459 (467)
Q Consensus 388 r~~l~~~l~~~~g~~~~~~~~~~~~g~f~~~~l--~~-~~~~~ll~~~gI~v~~gg----Ris~~~-~~~~~i~~~~~~l 459 (467)
++.+.+.|+ +++....+....+ .|.|+|+.+ +. ++.+. +.+.||.+.|++ ||+++. .+++++++++++|
T Consensus 299 ~~~~~~~l~-~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~-l~~~Gv~v~~~~~~~lRi~~~~~~t~~~i~~~~~~l 375 (379)
T TIGR00707 299 GDYFKERLE-ELGKNYPNKEVRG-KGLMLGIELEAPCKDIVKK-ALEKGLLVNCAGPKVLRFLPPLIITKEEIDEAVSAL 375 (379)
T ss_pred HHHHHHHHH-HHHhhCCCCcccc-CceEEEEEecCcHHHHHHH-HHHCCcEEeeCCCCEEEEECCCcCCHHHHHHHHHHH
Confidence 666666666 4432111222223 466666644 33 34555 455699999875 888643 4889999999999
Q ss_pred HHHH
Q 012238 460 IDSY 463 (467)
Q Consensus 460 ~~~l 463 (467)
++++
T Consensus 376 ~~~~ 379 (379)
T TIGR00707 376 EEAI 379 (379)
T ss_pred HHhC
Confidence 8764
No 125
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.95 E-value=1.4e-26 Score=205.53 Aligned_cols=276 Identities=19% Similarity=0.193 Sum_probs=212.7
Q ss_pred cccccCceeeeecCCchhHHHHHHHHHHHhCCC-CEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHH
Q 012238 145 SVLKEQRVATVQGLSGTGSLRLAAALIERYFPG-AKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADI 223 (467)
Q Consensus 145 ~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~g-d~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l 223 (467)
...++++|++ ..|+.+.+.++ +...+.|| ++|+...|+|+.|.-.+...+++++.+|.. .+|.++.|.+.+.+
T Consensus 82 kpLt~dnic~--GvGsDE~ID~i--iR~~c~PGkeKIl~cPPtysMY~v~A~iNd~eVvkvpl~--pdF~lnvdai~evl 155 (375)
T KOG0633|consen 82 KPLTSDNICV--GVGSDELIDLI--IRCVCDPGKEKILDCPPTYSMYVVDAAINDAEVVKVPLN--PDFSLNVDAIAEVL 155 (375)
T ss_pred CCCCccceEE--ecCcHHHHHHH--HhheecCCccceeecCCcceeEEEEeecCCceEEEecCC--CCccccHHHHHHHH
Confidence 4456899999 99999999997 33346699 899999999999988888999999999994 47899999999988
Q ss_pred HcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCc
Q 012238 224 KAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYS 303 (467)
Q Consensus 224 ~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~S 303 (467)
+.. ...+++++++|+||||..+..+++++|.+.-. |.++++||+|.+|.... +-..++...++++++++||
T Consensus 156 ~~d-s~iK~~F~tSPgNPtg~~ik~~di~KiLe~p~--nglVVvDEAYidFsg~~------S~~~lV~kYpNLivlqTlS 226 (375)
T KOG0633|consen 156 ELD-SKIKCIFLTSPGNPTGSIIKEDDILKILEMPD--NGLVVVDEAYIDFSGVE------SRMKLVKKYPNLIVLQTLS 226 (375)
T ss_pred hcc-ccceEEEEcCCCCCCcccccHHHHHHHHhCCC--CcEEEEeeeeEeecccc------ccchHhHhCCceeehhhhh
Confidence 753 47789999999999999999999999976432 78999999999997531 2224567889999999999
Q ss_pred cCcccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHH
Q 012238 304 KNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGR 383 (467)
Q Consensus 304 K~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~ 383 (467)
|.||++|+|+||-. .+..+++- +.....+. +.+..+..++..+|++... +.++..+..
T Consensus 227 KsfGLAGiRvG~~~---~~~~ia~i------------ln~~KaPY--NiS~~~s~~AL~Als~~n~-----kkme~~rda 284 (375)
T KOG0633|consen 227 KSFGLAGIRVGYGA---FPLSIAEI------------LNRAKAPY--NISVAGSVAALAALSDSNG-----KKMEDVRDA 284 (375)
T ss_pred hhcCcceeEeeccc---ccHHHHHH------------HHhccCCc--cccchhHHHHHHhcCcccc-----hHHHHHHHH
Confidence 99999999999995 67777776 66665553 4555667788888885433 347788888
Q ss_pred HHHHHHHHHHHhhhccCCCCCcccccCCcceEEecCC-------CHHHHHHHHHcccEEEeCCC---------eEEeccC
Q 012238 384 IKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL-------NKAQSDNMTNKWHVYMTKDG---------RISLAGL 447 (467)
Q Consensus 384 ~~~~r~~l~~~l~~~~g~~~~~~~~~~~~g~f~~~~l-------~~~~~~~ll~~~gI~v~~gg---------Ris~~~~ 447 (467)
+.+.|.++...|. +..+-+ ++..+....|+...+ +.....+++.++||.++--| ||+.+.
T Consensus 285 iv~er~RL~keLt-~v~~~~--~~~gg~daNFiLi~v~~~~n~~akkly~q~at~~gVvVRfrgse~~c~G~lRitvGt- 360 (375)
T KOG0633|consen 285 IVRERERLFKELT-EVPFLN--DYPGGSDANFILIEVTGGDNGMAKKLYKQDATKMGVVVRFRGSEEGCKGYLRITVGT- 360 (375)
T ss_pred HHHHHHHHHHHhh-cCcccc--CCCCcccccEEEEEEcCCCcHHHHHHHHHHHHhcceEEEEcCCccccceeEEEEcCC-
Confidence 8889999999998 765322 223333344655422 34556667777899997643 999986
Q ss_pred ChhhHHHHHHHHHHH
Q 012238 448 SLAKCEYLADAIIDS 462 (467)
Q Consensus 448 ~~~~i~~~~~~l~~~ 462 (467)
+|+..-+++.|++.
T Consensus 361 -~EentvL~k~~K~~ 374 (375)
T KOG0633|consen 361 -PEENTVLMKCLKQF 374 (375)
T ss_pred -cccchHHHHHHHhh
Confidence 46677777777664
No 126
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.95 E-value=2.2e-25 Score=225.05 Aligned_cols=336 Identities=13% Similarity=0.038 Sum_probs=215.6
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCch
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (467)
+.+.|||..|.+.+.-+. ..|.+.+++.+.+.... +....+..++++.+++++....+ .+++++ ++||+
T Consensus 38 g~~~iD~~~g~~~~~lG~--~~p~v~~a~~~~~~~~~---~~~~~~~~~~~~~la~~l~~~~~----~~~v~~--~~gg~ 106 (396)
T PRK02627 38 GKEYLDFLAGIAVNNLGH--CHPKLVEAIQEQAAKLI---HTSNLYYIEPQEELAEKLVELSG----MDKVFF--CNSGA 106 (396)
T ss_pred CCEEEECCccHHhccCCC--CCHHHHHHHHHHHhhcc---ccccccCCHHHHHHHHHHHhhcC----CCEEEE--CCCcH
Confidence 357899999876322222 24778888888765421 11112234677777777765433 368999 99999
Q ss_pred hHHHHHHHHHHHhC-C----CCEEEEcCCCCcchHHHHhhCCCCeE----EeeeecCCCC----CCChhhHHHHHHcCCC
Q 012238 162 GSLRLAAALIERYF-P----GAKVLISSPTWGNHKNIFNDARVPWS----EYRYYDPKTV----GLDFEGMIADIKAAPG 228 (467)
Q Consensus 162 ~al~l~~~~l~~~~-~----gd~Vlv~~P~y~~~~~~~~~~G~~~~----~v~~~~~~~~----~~d~~~l~~~l~~~~~ 228 (467)
+|+.++.++..... + .++|++..++|..+.......+.... ..+.. .++ ..|++.+++.+. +
T Consensus 107 eA~~~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~l~~~i~---~ 181 (396)
T PRK02627 107 EANEAAIKLARKYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQEGFEPLV--EGFIYVPFNDIEALKAAIT---D 181 (396)
T ss_pred HHHHHHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcCCccccccCCCCC--CCceEeCCCCHHHHHHhcC---C
Confidence 99999855432222 1 17899999999877655443332221 11111 111 128899999885 5
Q ss_pred CcEEEEeCCCCCCCC-CCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcc
Q 012238 229 GSFILLHGCAHNPTG-IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG 307 (467)
Q Consensus 229 ~~~~i~i~~p~NPTG-~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 307 (467)
+++++++.+++||+| ..++++.+++|.++|++||+++|+||+|.++...+ ..++.. .....++ +.+|||.++
T Consensus 182 ~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g---~~~~~~-~~~~~pd---i~t~sK~~~ 254 (396)
T PRK02627 182 KTAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTG---KLFAYQ-HYGIEPD---IMTLAKGLG 254 (396)
T ss_pred CeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccC---ceeeeh-hcCCCCC---EEEEcchhh
Confidence 778888888999999 68899999999999999999999999999886532 111111 1122223 337999999
Q ss_pred cCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHH
Q 012238 308 LYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNV 387 (467)
Q Consensus 308 ~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~ 387 (467)
+|+|+||++ .++++++. +.........+.+.+.|.++..+|+.... .+..+..++..+..
T Consensus 255 -~G~rig~~~---~~~~~~~~------------~~~~~~~~t~~~~~~~~~aa~~~l~~~~~----~~~~~~~~~~~~~~ 314 (396)
T PRK02627 255 -GGVPIGAVL---AKEKVADV------------FTPGDHGSTFGGNPLACAAALAVIEIIEE----EGLLENAAEVGEYL 314 (396)
T ss_pred -CCcccEEEE---EcHHHHhc------------cCCCCCCCCCCCCHHHHHHHHHHHHHHhh----ccHHHHHHHHHHHH
Confidence 999999996 66777766 54333333446777888888777753211 11122333333333
Q ss_pred HHHHHHHhhhccCCCCCcccccCCcceEEecCC--C-HHHHHHHHHcccEEEeCCC----eEEec-cCChhhHHHHHHHH
Q 012238 388 RQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL--N-KAQSDNMTNKWHVYMTKDG----RISLA-GLSLAKCEYLADAI 459 (467)
Q Consensus 388 r~~l~~~l~~~~g~~~~~~~~~~~~g~f~~~~l--~-~~~~~~ll~~~gI~v~~gg----Ris~~-~~~~~~i~~~~~~l 459 (467)
++.+.+.+. .++. +....+ .|.|+|+.+ + .+++.+++++ ||.+.+++ ||+++ ..+++++++++++|
T Consensus 315 ~~~l~~~~~-~~~~---~~~~~~-~g~~~~i~~~~~~~~~~~~l~~~-Gv~v~~~~~~~lRi~~~~~~~~~~i~~~~~~l 388 (396)
T PRK02627 315 RAKLRELLE-KYPG---IKEVRG-LGLMIGIELDRPAAEIVKKALEK-GLLINVTGDNVLRLLPPLIISKEEIDEAVDRL 388 (396)
T ss_pred HHHHHHHHH-hCCC---eeeecc-CcEEEEEEecCcHHHHHHHHHHC-CeEEeecCCCEEEEECCcccCHHHHHHHHHHH
Confidence 333433333 3321 222223 466777754 2 3556777765 99999875 88764 44889999999999
Q ss_pred HHHHHhc
Q 012238 460 IDSYHNV 466 (467)
Q Consensus 460 ~~~l~~~ 466 (467)
+++++++
T Consensus 389 ~~~l~~~ 395 (396)
T PRK02627 389 EEVLKEL 395 (396)
T ss_pred HHHHHhh
Confidence 9998865
No 127
>PLN02483 serine palmitoyltransferase
Probab=99.95 E-value=6.3e-25 Score=225.52 Aligned_cols=330 Identities=13% Similarity=0.037 Sum_probs=218.2
Q ss_pred CCcEEecCcccCCCCCC-CCchHHHHHHHHHHHhc--CCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCC
Q 012238 83 EKKLNLGVGAYRTEELQ-PYVLDVVKKAENLMLER--GENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 159 (467)
Q Consensus 83 ~~~i~l~~G~~~d~~~~-p~~~~~v~~a~~~~~~~--~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g 159 (467)
.+.+||+.-.|..-+.. +...+.+.+++.+.-.. +....|++..+..++++++|++++. ++.|++ +.|
T Consensus 100 ~~~~n~~s~~YLgl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~g~-------~~ai~~--~~G 170 (489)
T PLN02483 100 RRCLNLGSYNYLGFAAADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEELVARFVGK-------PAAIVF--GMG 170 (489)
T ss_pred ceEEEeecCCccCcCCCCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHHHHHHhCC-------CcEEEE--CCH
Confidence 47899999888644322 22356777777775422 2224587888999999999999763 556766 554
Q ss_pred chhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcC----------CCC
Q 012238 160 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA----------PGG 229 (467)
Q Consensus 160 gt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~----------~~~ 229 (467)
..+...+ +...+.+||.|++.+|+|..+...++..|++++.++. .|++.+++.+++. +.+
T Consensus 171 -~~an~~~--i~al~~~Gd~Vi~d~~~h~s~~~~~~~~Ga~v~~~~~-------~d~~~le~~l~~~i~~~~p~t~~p~~ 240 (489)
T PLN02483 171 -YATNSTI--IPALIGKGGLIISDSLNHNSIVNGARGSGATIRVFQH-------NTPSHLEEVLREQIAEGQPRTHRPWK 240 (489)
T ss_pred -HHHHHHH--HHHhCCCCCEEEEcchhhHHHHHHHHHcCCeEEEEeC-------CCHHHHHHHHHhhhhccccccccCCc
Confidence 4444443 3445779999999999999999999999999999875 2456666655421 112
Q ss_pred cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHH--hcCCeEEEEecCccCcc
Q 012238 230 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFA--TRGMELLVAQSYSKNLG 307 (467)
Q Consensus 230 ~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~S~SK~~~ 307 (467)
..++++....|++|.+.+ +++|+++|++||++||+||+|.....+. ....+..+. +..+.+|+++||||.+|
T Consensus 241 k~livve~v~s~~G~~~~---l~~I~~la~~~~~~livDEa~s~g~~G~---~G~g~~~~~~v~~~~~dI~~~SfSKs~g 314 (489)
T PLN02483 241 KIIVIVEGIYSMEGELCK---LPEIVAVCKKYKAYVYLDEAHSIGAVGK---TGRGVCELLGVDPADVDIMMGTFTKSFG 314 (489)
T ss_pred eEEEEECCCCCCCCcccC---HHHHHHHHHHcCCEEEEECcCccCccCC---CCCchHHhcCCCcccCcEEEEecchhcc
Confidence 345555556799998765 5577777999999999999987433331 111111221 22356799999999999
Q ss_pred cCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccC---ccCCCchHHHHHHHHHh---CChhhHHHHHHHHHHHH
Q 012238 308 LYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARP---MYSNPPVHGARIVANVV---GNPALFDEWKAEMEMMA 381 (467)
Q Consensus 308 ~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~~~~~L---~~~~~~~~~~~~l~~~~ 381 (467)
++| ||++ +++++++. ++..... ....++...+.+ ...| ...+- .+...+.+
T Consensus 315 ~~G---G~i~---~~~~li~~------------l~~~~~~~~~~~~~~p~~~~~~-~aaL~~l~~~~g----~~~~~~~~ 371 (489)
T PLN02483 315 SCG---GYIA---GSKELIQY------------LKRTCPAHLYATSMSPPAVQQV-ISAIKVILGEDG----TNRGAQKL 371 (489)
T ss_pred cCc---eEEE---cCHHHHHH------------HHHhCccccccCCcCHHHHHHH-HHHHHHHHhCcc----ccchHHHH
Confidence 887 9985 88888887 5544322 122233334333 2223 11100 01234567
Q ss_pred HHHHHHHHHHHHHhhhccCCCCCcccccCCcceEEec--CC---CHHHHHHHHHcccEEEeCC---------C--eEEec
Q 012238 382 GRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFT--GL---NKAQSDNMTNKWHVYMTKD---------G--RISLA 445 (467)
Q Consensus 382 ~~~~~~r~~l~~~l~~~~g~~~~~~~~~~~~g~f~~~--~l---~~~~~~~ll~~~gI~v~~g---------g--Ris~~ 445 (467)
++++++++++.+.|+ ++| +.+..+.++..+|+ .. ..++.++|++ +||.+.+. + ||+++
T Consensus 372 ~~l~~~~~~l~~~L~-~~G----~~v~~~~~sp~~~l~l~~~~~~~~~~~~Ll~-~GI~v~~~~fp~~p~~~~~vRi~is 445 (489)
T PLN02483 372 AQIRENSNFFRSELQ-KMG----FEVLGDNDSPVMPIMLYNPAKIPAFSRECLK-QNVAVVVVGFPATPLLLARARICIS 445 (489)
T ss_pred HHHHHHHHHHHHHHH-HCC----CcccCCCCCCEEEEEECCHHHHHHHHHHHHH-CCcEEeeeCCCCCCCCCceEEEEeC
Confidence 889999999999999 876 45544444434332 11 2356777776 59998742 2 88886
Q ss_pred c-CChhhHHHHHHHHHHHHHhc
Q 012238 446 G-LSLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 446 ~-~~~~~i~~~~~~l~~~l~~~ 466 (467)
. .+++++++++++|+++++.+
T Consensus 446 a~~t~edId~~l~~L~~~~~~~ 467 (489)
T PLN02483 446 ASHSREDLIKALEVISEVGDLV 467 (489)
T ss_pred CCCCHHHHHHHHHHHHHHHHHh
Confidence 4 48899999999999987654
No 128
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.95 E-value=7.7e-25 Score=221.87 Aligned_cols=327 Identities=14% Similarity=0.098 Sum_probs=217.4
Q ss_pred CCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCC------CcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeee
Q 012238 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGEN------KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQ 156 (467)
Q Consensus 83 ~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~------~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~ 156 (467)
.+.++|+.-.| +++.. +|.+++++.+.++.... ..|.......+|++.+|+++.. ++.+++
T Consensus 46 ~~~~~~~sn~y---l~l~~-~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~g~-------~~~i~~-- 112 (410)
T PRK13392 46 RRVTIWCSNDY---LGMGQ-HPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLHGK-------ESALLF-- 112 (410)
T ss_pred ceEEEEECCCc---cCCCC-CHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHhCC-------CCEEEE--
Confidence 45788888665 34443 78888888887643210 1232233577899999999642 456666
Q ss_pred cCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcC-CCCcEEEEe
Q 012238 157 GLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA-PGGSFILLH 235 (467)
Q Consensus 157 t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~-~~~~~~i~i 235 (467)
+ +|+++...+...+....+||.|++..+.|..+...++..|+++..++. .|++.+++.++.. .++++++++
T Consensus 113 ~-sG~~a~~~~i~~l~~~~~g~~vi~~~~~h~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~t~~v~i 184 (410)
T PRK13392 113 T-SGYVSNDAALSTLGKLLPGCVILSDALNHASMIEGIRRSGAEKQVFRH-------NDLADLEEQLASVDPDRPKLIAF 184 (410)
T ss_pred C-cHHHHHHHHHHHHhcCCCCCEEEEehhhhHHHHHHHHHcCCeEEEEeC-------CCHHHHHHHHHhccCCCCEEEEE
Confidence 4 456666655222222348898888777777777778888988766643 2556666666543 247789999
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCe-EEEEecCccCcccCCCccc
Q 012238 236 GCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGME-LLVAQSYSKNLGLYAERIG 314 (467)
Q Consensus 236 ~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~S~SK~~~~~G~RiG 314 (467)
++|+||||.+++ +++|.++|+++|+++|+||+|....++.. .. .+.......++ .++++||||.||++| |
T Consensus 185 ~~~~n~tG~~~~---l~~i~~l~~~~~~~livDea~~~g~~g~~-g~--g~~~~~~~~~~~div~~tlsK~~g~~G---G 255 (410)
T PRK13392 185 ESVYSMDGDIAP---IEAICDLADRYNALTYVDEVHAVGLYGAR-GG--GIAERDGLMDRIDMIQGTLAKAFGCLG---G 255 (410)
T ss_pred eCCCCCCccccc---HHHHHHHHHHcCCEEEEECCccccCcCCC-CC--chhhhccCCCCCcEEEEEChHhhhccc---c
Confidence 999999999988 55777779999999999999983333311 11 11111111122 388999999999988 8
Q ss_pred eEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCc--cCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 012238 315 AMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPM--YSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLF 392 (467)
Q Consensus 315 ~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~ 392 (467)
|++ +++++++. +++....+ ....+...+.++..+|+.. +.....+++++++++++.
T Consensus 256 ~~~---~~~~~~~~------------l~~~~~~~~~s~~~~~~~~~a~~aaL~~~-------~~~~~~~~~~~~~~~~l~ 313 (410)
T PRK13392 256 YIA---ASADLIDF------------VRSFAPGFIFTTALPPAVAAGATAAIRHL-------KTSQTERDAHQDRVAALK 313 (410)
T ss_pred hhh---cCHHHHHH------------HHHhCcchhccCcCCHHHHHHHHHHHHHH-------hcCHHHHHHHHHHHHHHH
Confidence 984 78888776 55444432 2234445666666666422 112345577888999999
Q ss_pred HHhhhccCCCCCcccccCCcceE-EecCCC---HHHHHHHHHcccEEEeCC-------C----eEEecc-CChhhHHHHH
Q 012238 393 DSLSAKDKSGKDWSFILRQIGMF-SFTGLN---KAQSDNMTNKWHVYMTKD-------G----RISLAG-LSLAKCEYLA 456 (467)
Q Consensus 393 ~~l~~~~g~~~~~~~~~~~~g~f-~~~~l~---~~~~~~ll~~~gI~v~~g-------g----Ris~~~-~~~~~i~~~~ 456 (467)
+.|+ ++| +++.+++++++ ++++.. .++.++|++++||.+.+. | ||++.. .+++++++++
T Consensus 314 ~~L~-~~g----~~~~~~~~~~~~i~~~~~~~~~~~~~~L~~~~GI~v~~~~~p~~~~~~~~lRis~~~~~t~edid~l~ 388 (410)
T PRK13392 314 AKLN-ANG----IPVMPSPSHIVPVMVGDPTLCKAISDRLMSEHGIYIQPINYPTVPRGTERLRITPTPLHDDEDIDALV 388 (410)
T ss_pred HHHH-HcC----CCCCCCCCCEEEEEeCCHHHHHHHHHHHHHhCCEEEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHH
Confidence 9999 777 46666777765 455532 245667776679999763 2 888742 3789999999
Q ss_pred HHHHHHHHhc
Q 012238 457 DAIIDSYHNV 466 (467)
Q Consensus 457 ~~l~~~l~~~ 466 (467)
++|+++++++
T Consensus 389 ~aL~~~~~~~ 398 (410)
T PRK13392 389 AALVAIWDRL 398 (410)
T ss_pred HHHHHHHHHc
Confidence 9999988754
No 129
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.95 E-value=4.2e-25 Score=218.18 Aligned_cols=306 Identities=16% Similarity=0.041 Sum_probs=209.9
Q ss_pred hHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEE
Q 012238 103 LDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLI 182 (467)
Q Consensus 103 ~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv 182 (467)
++.+++++.+.... . ..|.+..+..++++.++++++ ++++++ +.||++++.++ +...+.+||+|++
T Consensus 11 ~~~v~~a~~~~~~~-~-~~~~~~~~~~~l~~~~a~~~g--------~~~~~~--~~~gt~a~~~~--~~~l~~~gd~v~~ 76 (338)
T cd06502 11 TPEMLEAMAAANVG-D-DVYGEDPTTAKLEARAAELFG--------KEAALF--VPSGTAANQLA--LAAHTQPGGSVIC 76 (338)
T ss_pred CHHHHHHHHhcccC-C-cccCCCHHHHHHHHHHHHHhC--------CCeEEE--ecCchHHHHHH--HHHhcCCCCeEEE
Confidence 78899988875432 2 367777889999999999964 235666 78889998887 3444679999999
Q ss_pred cCCCCcchHH---HHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCC----CCcEEEEeCCCCCCCCCCCCHHHHHHHH
Q 012238 183 SSPTWGNHKN---IFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP----GGSFILLHGCAHNPTGIDPTPEQWEKIA 255 (467)
Q Consensus 183 ~~P~y~~~~~---~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~----~~~~~i~i~~p~NPTG~~~~~~~l~~l~ 255 (467)
+.|+|..+.. ..+..|++++.++.. . +.+|++.+++.+++.. ++++++++++|+|| |.+++.+++++|+
T Consensus 77 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~-~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~-g~~~~~~~l~~i~ 152 (338)
T cd06502 77 HETAHIYTDEAGAPEFLSGVKLLPVPGE--N-GKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEG-GTVYPLDELKAIS 152 (338)
T ss_pred ecCcceeeecCCcHHHHcCceEEeecCC--C-CcCCHHHHHHHhhccCCCcCCcceEEEEEeecCC-ccccCHHHHHHHH
Confidence 9999875432 345689999999873 2 5799999999997421 36789999999998 6677999999999
Q ss_pred HHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecCCHHHHhhhhhhhHH
Q 012238 256 DVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVI 335 (467)
Q Consensus 256 ~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~ 335 (467)
++|+++|+++|+||+|..+....... .+... ..+.+ +++.|+||.++++| |+++ ..++++++.
T Consensus 153 ~~~~~~~~~livDea~~~~~~~~~~~---~~~~~-~~~~d-~~~~s~sK~~~~~~---g~~~--~~~~~~~~~------- 215 (338)
T cd06502 153 ALAKENGLPLHLDGARLANAAAALGV---ALKTY-KSGVD-SVSFCLSKGGGAPV---GAVV--VGNRDFIAR------- 215 (338)
T ss_pred HHHHHcCCeEeechHHHHHHHHhcCC---CHHHH-HhcCC-EEEEeccccCCCcc---ceEE--ECCHHHHHH-------
Confidence 99999999999999975432111001 11122 12233 46889999999887 6543 477888777
Q ss_pred HHHHHHHhhccC--ccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcc
Q 012238 336 QVKSQLKRLARP--MYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIG 413 (467)
Q Consensus 336 ~~~~~l~~~~~~--~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~~~g 413 (467)
+...... ...+.+.+.+.++...|++..+ .+..+++.++++++.+.|+ ++|. .+.++.++
T Consensus 216 -----~~~~~~~~~~~~~~~~~~~~a~~~~L~~~~~--------~~~~~~~~~~~~~l~~~L~-~~~~----~~~~~~~~ 277 (338)
T cd06502 216 -----ARRRRKQAGGGMRQSGFLAAAGLAALENDLW--------LRRLRHDHEMARRLAEALE-ELGG----LESEVQTN 277 (338)
T ss_pred -----HHHHHHHhCCChhhHHHHHHHHHHHhcCchH--------HHHHHHHHHHHHHHHHHHH-hcCC----CcccccCC
Confidence 4333221 1223455566666666765321 2344667777889999998 7763 45566666
Q ss_pred eEEe-cCCCHHHHHHHHH------cccEEEeCCC----eEEeccC-ChhhHHHHHHHHHH
Q 012238 414 MFSF-TGLNKAQSDNMTN------KWHVYMTKDG----RISLAGL-SLAKCEYLADAIID 461 (467)
Q Consensus 414 ~f~~-~~l~~~~~~~ll~------~~gI~v~~gg----Ris~~~~-~~~~i~~~~~~l~~ 461 (467)
++++ ...+.....++.+ ++|+.+.+.+ ||+.+.. ++++++++++++++
T Consensus 278 ~~~v~~~~~~~~~~~l~~~l~~~~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 278 IVLLDPVEANAVFVELSKEAIERRGEGVLFYAWGEGGVRFVTHWDTTEEDVDELLSALKA 337 (338)
T ss_pred eEEEecCCccHHHHHHHHHHHHhhhCCEEEEecCCCeEEEEeecCCCHHHHHHHHHHHhc
Confidence 5433 2222233333332 4699887763 8887743 67899999998865
No 130
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.94 E-value=1.7e-24 Score=217.69 Aligned_cols=323 Identities=15% Similarity=0.093 Sum_probs=214.7
Q ss_pred CCCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhc-CC-CCcCCC----CcchHHHHHHHHHHHhCCCCcccccCceee
Q 012238 81 TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-GE-NKEYLP----IEGLAAFNKVTAELLFGADNSVLKEQRVAT 154 (467)
Q Consensus 81 ~~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~-~~-~~~Y~~----~~G~~~lr~aia~~l~~~~~~~~~~~~i~~ 154 (467)
.+.+.|||+.|.+. ++++ +|.+.+++.+.+.. +. ...|.. ..-..++++++++++. . ++.+++
T Consensus 37 ~g~~~id~~~~~~~---g~~~-~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~-~------~~~i~~ 105 (385)
T PRK05958 37 DGRRMLNFASNDYL---GLAR-HPRLIAAAQQAARRYGAGSGGSRLVTGNSPAHEALEEELAEWFG-A------ERALLF 105 (385)
T ss_pred CCceEEEeeCCCcc---cCCC-CHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhC-C------CcEEEE
Confidence 44689999998641 3322 67788888887743 10 111222 2235677888888753 1 444544
Q ss_pred eecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEE
Q 012238 155 VQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILL 234 (467)
Q Consensus 155 ~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~ 234 (467)
.+|++++..+ +...+.+||+|+++.|+|+.+...++..|++++.++. .|++.+++.++..++.+.+++
T Consensus 106 ---~~g~~~~~~~--l~~~~~~gd~V~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~i~~~~~~~~lvi 173 (385)
T PRK05958 106 ---SSGYAANLAV--LTALAGKGDLIVSDKLNHASLIDGARLSRARVRRYPH-------NDVDALEALLAKWRAGRALIV 173 (385)
T ss_pred ---CcHHHHHHHH--HHHhCCCCCEEEEeCccCHHHHHHHHhcCCceEEeCC-------CCHHHHHHHHHhccCCCeEEE
Confidence 5566666554 3344679999999999999999999999999888765 488999998875323467778
Q ss_pred eCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHH-HHhcCCeEEEEecCccCcccCCCcc
Q 012238 235 HGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRL-FATRGMELLVAQSYSKNLGLYAERI 313 (467)
Q Consensus 235 i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~S~SK~~~~~G~Ri 313 (467)
+++++||||...+ +++|+++|++||+++|+||+|....++.. ....... .....++++++.|+||.++++|
T Consensus 174 ~~~~~~~~G~~~~---l~~i~~ia~~~~~~li~De~~~~g~~~~~--g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G--- 245 (385)
T PRK05958 174 TESVFSMDGDLAP---LAELVALARRHGAWLLVDEAHGTGVLGPQ--GRGLAAEAGLAGEPDVILVGTLGKALGSSG--- 245 (385)
T ss_pred EEecccCCCCcCC---HHHHHHHHHHhCCEEEEECcccccccCCC--CCchHHhhCCCCCCceEEEEechhhcccCC---
Confidence 8889999998766 55777889999999999999865444311 1111111 1223467899999999999777
Q ss_pred ceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCc-c-CCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHH
Q 012238 314 GAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPM-Y-SNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKL 391 (467)
Q Consensus 314 G~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~-~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l 391 (467)
||++ .++++.+. +....... . .+.+...+.++..+|+.. .. .....+++.++++++
T Consensus 246 g~~~---~~~~~~~~------------~~~~~~~~~~~~~~~~~~~aa~~aal~~~------~~-~~~~~~~~~~~~~~l 303 (385)
T PRK05958 246 AAVL---GSETLIDY------------LINRARPFIFTTALPPAQAAAARAALRIL------RR-EPERRERLAALIARL 303 (385)
T ss_pred cEEE---cCHHHHHH------------HHHhCccceecCCCCHHHHHHHHHHHHHH------hc-CHHHHHHHHHHHHHH
Confidence 8874 77777666 43322221 1 233444433444444311 11 135678888999999
Q ss_pred HHHhhhccCCCCCcccccCCcceEEecCCC-----HHHHHHHHHcccEEEeCC-------C----eEEecc-CChhhHHH
Q 012238 392 FDSLSAKDKSGKDWSFILRQIGMFSFTGLN-----KAQSDNMTNKWHVYMTKD-------G----RISLAG-LSLAKCEY 454 (467)
Q Consensus 392 ~~~l~~~~g~~~~~~~~~~~~g~f~~~~l~-----~~~~~~ll~~~gI~v~~g-------g----Ris~~~-~~~~~i~~ 454 (467)
.+.|+ +++ +++..+.++++ |+.+. .++.+++.+ +||.+.++ | ||+++. .+++++++
T Consensus 304 ~~~L~-~~~----~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~-~gI~v~~~~~~~~~~~~~~lRis~~~~~~~~~i~~ 376 (385)
T PRK05958 304 RAGLR-ALG----FQLMDSQSAIQ-PLIVGDNERALALAAALQE-QGFWVGAIRPPTVPAGTSRLRITLTAAHTEADIDR 376 (385)
T ss_pred HHHHH-HcC----CCcCCCCCCEE-EEEeCCHHHHHHHHHHHHH-CCceEecccCCCCCCCCceEEEEecCCCCHHHHHH
Confidence 99999 776 45666666644 44331 244556654 69999752 2 999873 47899999
Q ss_pred HHHHHHHHH
Q 012238 455 LADAIIDSY 463 (467)
Q Consensus 455 ~~~~l~~~l 463 (467)
++++|++++
T Consensus 377 ~l~~l~~~~ 385 (385)
T PRK05958 377 LLEALAEAL 385 (385)
T ss_pred HHHHHHhcC
Confidence 999998763
No 131
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.94 E-value=6.6e-25 Score=221.99 Aligned_cols=328 Identities=15% Similarity=0.188 Sum_probs=217.1
Q ss_pred CCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcC------CCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeee
Q 012238 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG------ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQ 156 (467)
Q Consensus 83 ~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~------~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~ 156 (467)
.+.|+|..|.. ++++.|++++...+... ....|....+.+++++.+++++....|.. ..+|++
T Consensus 19 ~~~~~~~~~~~-------~~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~--~~~v~~-- 87 (402)
T cd00378 19 RETLELIASEN-------FTSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAE--YANVQP-- 87 (402)
T ss_pred HhCeeeeccCC-------cCCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCC--ceeeec--
Confidence 36899987754 23788999987654211 12345566777888876554433322322 334544
Q ss_pred cCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHH-----HhhCCCCeEEeeeecC-CCCCCChhhHHHHHHcCCCCc
Q 012238 157 GLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI-----FNDARVPWSEYRYYDP-KTVGLDFEGMIADIKAAPGGS 230 (467)
Q Consensus 157 t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~-----~~~~G~~~~~v~~~~~-~~~~~d~~~l~~~l~~~~~~~ 230 (467)
.||++++.++ +...+.|||+|+++.|+|..+... ++..|.++..+++..+ +++.+|++.+++.+.+ .++
T Consensus 88 -~sgt~a~~~~--l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~i~~--~~~ 162 (402)
T cd00378 88 -HSGSQANLAV--YFALLEPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDYDALEKMALE--FKP 162 (402)
T ss_pred -CCcHHHHHHH--HHHhcCCCCEEEEecCccCccccccccccccccceeEEEecCCcCcccCCcCHHHHHHHHHh--CCC
Confidence 4678999887 455577999999999999876443 6677887777776433 2688999999999864 456
Q ss_pred EEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccC-CCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccC
Q 012238 231 FILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAY-QGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY 309 (467)
Q Consensus 231 ~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~ 309 (467)
+++++++++||+. . ++++|+++|+++|+++|+|++| .++.+.+. ....+ . +.+ ++++|+||.+ +
T Consensus 163 ~~v~~~~~~~~~~--~---~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~--~~~~~----~-~~d-v~~~s~sK~l--~ 227 (402)
T cd00378 163 KLIVAGASAYPRP--I---DFKRFREIADEVGAYLLVDMAHVAGLVAGGV--FPNPL----P-GAD-VVTTTTHKTL--R 227 (402)
T ss_pred CEEEecCcccCCC--c---CHHHHHHHHHhcCCEEEEEccchhhhhhccc--CCCcc----c-CCc-EEEeccccCC--C
Confidence 7888888888753 2 4678888999999999999994 55543221 01111 1 223 6899999977 7
Q ss_pred CCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCch-HHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHH
Q 012238 310 AERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPV-HGARIVANVVGNPALFDEWKAEMEMMAGRIKNVR 388 (467)
Q Consensus 310 G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r 388 (467)
|+|.||++ +.++++++. +.........+.+. ....++..++.. .. .....+.++++++++
T Consensus 228 G~~gg~i~--~~~~~~~~~------------l~~~~~~~~~~~~~~~~~~a~~~al~~--~~---~~~~~~~~~~~~~~~ 288 (402)
T cd00378 228 GPRGGLIL--TRKGELAKK------------INSAVFPGLQGGPHLHVIAAKAVALKE--AL---EPEFKAYAKQVVENA 288 (402)
T ss_pred CCCceEEE--eccHHHHHH------------HHHHhCccccCCchHHHHHHHHHHHHH--Hh---hHHHHHHHHHHHHHH
Confidence 89999996 445477776 44433332222222 222222222211 10 113556778899999
Q ss_pred HHHHHHhhhccCCCCCcccc-cCCcceEEecCC-----CHHHHHHHHHcccEEEeCC-------------C-eEEecc--
Q 012238 389 QKLFDSLSAKDKSGKDWSFI-LRQIGMFSFTGL-----NKAQSDNMTNKWHVYMTKD-------------G-RISLAG-- 446 (467)
Q Consensus 389 ~~l~~~l~~~~g~~~~~~~~-~~~~g~f~~~~l-----~~~~~~~ll~~~gI~v~~g-------------g-Ris~~~-- 446 (467)
+++.+.|. +.| +.+. .+.+++|+|+.+ +.+.+.++++++||.+.+. + ||++..
T Consensus 289 ~~l~~~L~-~~g----~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~l~~~gI~v~~~~~p~~~~~~~~~~~lRi~~~~~~ 363 (402)
T cd00378 289 KALAEALK-ERG----FKVVSGGTDNHLVLVDLRPKGITGKAAEDALEEAGITVNKNTLPWDPSSPFVPSGIRIGTPAMT 363 (402)
T ss_pred HHHHHHHH-hCC----CeEeecCCCCeEEEEeCCccCCCHHHHHHHHHHcCcEEcCCcCCCCCCCCCCCCeeEecCHHHH
Confidence 99999998 776 4444 456788898865 3455666778889999631 1 887654
Q ss_pred ---CChhhHHHHHHHHHHHHHh
Q 012238 447 ---LSLAKCEYLADAIIDSYHN 465 (467)
Q Consensus 447 ---~~~~~i~~~~~~l~~~l~~ 465 (467)
+++++++++++.|++++++
T Consensus 364 ~~~~~~~di~~~~~~l~~~~~~ 385 (402)
T cd00378 364 TRGMGEEEMEEIADFIARALKD 385 (402)
T ss_pred HhCCCHHHHHHHHHHHHHHHhc
Confidence 3579999999999998764
No 132
>PRK02948 cysteine desulfurase; Provisional
Probab=99.94 E-value=7.1e-25 Score=220.17 Aligned_cols=325 Identities=13% Similarity=0.032 Sum_probs=212.4
Q ss_pred cCCCCCCCCchHHHHHHHHHHHhcCC---CCcCC----CCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHH
Q 012238 93 YRTEELQPYVLDVVKKAENLMLERGE---NKEYL----PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLR 165 (467)
Q Consensus 93 ~~d~~~~p~~~~~v~~a~~~~~~~~~---~~~Y~----~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~ 165 (467)
|+|.++..++++.+.+++.+.+.... ...|. ...-..++|+.++++++.. +++|++ ++|+++++.
T Consensus 3 yld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~------~~~i~~--~~g~t~a~~ 74 (381)
T PRK02948 3 YLDYAATTPMSKEALQTYQKAASQYFGNESSLHDIGGTASSLLQVCRKTFAEMIGGE------EQGIYF--TSGGTESNY 74 (381)
T ss_pred eccCCCCCCCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCC------CCeEEE--eCcHHHHHH
Confidence 45666666668899999988774311 01110 0123568888999986543 678988 999999998
Q ss_pred HHHHHHHH--hCCCCEEEEcCCCCc---chHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCC
Q 012238 166 LAAALIER--YFPGAKVLISSPTWG---NHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN 240 (467)
Q Consensus 166 l~~~~l~~--~~~gd~Vlv~~P~y~---~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~N 240 (467)
++...+.. ..+||+|++..+.|+ .+...++..|++++.++++ .++.+|++.+++.++ ++++++++++|+|
T Consensus 75 ~~~~~~~~~~~~~g~~vv~~~~~h~s~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~l~~~l~---~~~~lv~~~~~~n 149 (381)
T PRK02948 75 LAIQSLLNALPQNKKHIITTPMEHASIHSYFQSLESQGYTVTEIPVD--KSGLIRLVDLERAIT---PDTVLASIQHANS 149 (381)
T ss_pred HHHHHHHHhccCCCCEEEECCcccHHHHHHHHHHHhCCCEEEEEeeC--CCCCCCHHHHHHhcC---CCCEEEEEECCcC
Confidence 86322211 147899999886555 4445567789999999984 346799999999886 5678999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEec
Q 012238 241 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC 320 (467)
Q Consensus 241 PTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~ 320 (467)
|||.+++.+ +|.++|+++|+++++|++ +.+..... + + ......+++.|++|.+|++| +|+++ .
T Consensus 150 ~tG~~~~~~---~I~~l~~~~~~~vivD~~-~~~g~~~~--~---~----~~~~~d~~~~s~~K~~gp~G--~G~l~--~ 212 (381)
T PRK02948 150 EIGTIQPIA---EIGALLKKYNVLFHSDCV-QTFGKLPI--D---V----FEMGIDSLSVSAHKIYGPKG--VGAVY--I 212 (381)
T ss_pred CcEeehhHH---HHHHHHHHcCCEEEEECh-hhcccccc--C---c----ccCCCCEEEecHHhcCCCCc--EEEEE--E
Confidence 999998865 677779999999999965 55543211 1 1 11235677899999999888 68886 2
Q ss_pred CCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 012238 321 SSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK 400 (467)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g 400 (467)
.+...... +.............+++..++.++..++... .+.+++.++++++.++++.+.|+ +++
T Consensus 213 ~~~~~~~~--------~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~------~~~~~~~~~~~~~~~~~l~~~L~-~~~ 277 (381)
T PRK02948 213 NPQVRWKP--------VFPGTTHEKGFRPGTVNVPGIAAFLTAAENI------LKNMQEESLRFKELRSYFLEQIQ-TLP 277 (381)
T ss_pred cCCCCCCC--------cccCCCCCCCcCCCCccHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHh-cCC
Confidence 33211111 0000000001112345555656666555421 23366788999999999999999 876
Q ss_pred CCCCcccccCC-cc-----e--EEecCCCHHHHHHHHHcccEEEeCC-------------------------C--eEEec
Q 012238 401 SGKDWSFILRQ-IG-----M--FSFTGLNKAQSDNMTNKWHVYMTKD-------------------------G--RISLA 445 (467)
Q Consensus 401 ~~~~~~~~~~~-~g-----~--f~~~~l~~~~~~~ll~~~gI~v~~g-------------------------g--Ris~~ 445 (467)
+ ++.... .. . |...+++.+.+...++++||.+..| + |||++
T Consensus 278 ~----~v~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~gI~v~~g~~c~~~~~~p~~~~~~~~~~~~~~~~~lRis~~ 353 (381)
T PRK02948 278 L----PIEVEGHSTSCLPHIIGVTIKGIEGQYTMLECNRRGIAISTGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFG 353 (381)
T ss_pred C----CEEEeCCCccCcCCEEEEEeCCCCHHHHHHhcccCCEEEEchHhcCCCCCCCCHHHHHcCCChHHhCceEEEEcC
Confidence 3 322221 11 1 1112344444443456679999731 2 99987
Q ss_pred cC-ChhhHHHHHHHHHHHHHhc
Q 012238 446 GL-SLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 446 ~~-~~~~i~~~~~~l~~~l~~~ 466 (467)
.. +++++++++++|+++++++
T Consensus 354 ~~~t~~di~~l~~~l~~~~~~~ 375 (381)
T PRK02948 354 QQTTKDQIDTTIHALETIGNQF 375 (381)
T ss_pred CCCCHHHHHHHHHHHHHHHHHH
Confidence 44 6799999999999988764
No 133
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.94 E-value=2.2e-24 Score=215.40 Aligned_cols=311 Identities=13% Similarity=0.011 Sum_probs=203.4
Q ss_pred hHHHHHHHHHHHhcCCCCcCCC-------CcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhC
Q 012238 103 LDVVKKAENLMLERGENKEYLP-------IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF 175 (467)
Q Consensus 103 ~~~v~~a~~~~~~~~~~~~Y~~-------~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~ 175 (467)
.+...+++.+.........+.. ..-..++++.+|+++.. +.+.+ ++|+++++.++ +...+.
T Consensus 21 ~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~e~lA~~~g~--------~~~~i--~~g~~~a~~~~--~~~l~~ 88 (370)
T TIGR02539 21 TEAARKALVEFGDGYSVCDFCGGRLDQITKPPIHDFLEDLAEFLGM--------DEARV--THGAREGKFAV--MHALCK 88 (370)
T ss_pred cHHHHHHHHHHhhccccccccccccccccchHHHHHHHHHHHHhCC--------CceEE--ECChHHHHHHH--HHHhhC
Confidence 6677777766643111011100 11356788899999643 24555 79999999987 444567
Q ss_pred CCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCC----CCcEEEEeCCCCCCCCCCCCHHHH
Q 012238 176 PGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP----GGSFILLHGCAHNPTGIDPTPEQW 251 (467)
Q Consensus 176 ~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~----~~~~~i~i~~p~NPTG~~~~~~~l 251 (467)
+||+|++..+.|......++..|++++.++..++.++.+|++.+++.+++.. .+++++++++|+||||...+.+
T Consensus 89 ~gd~Vl~~~~~h~s~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~l~-- 166 (370)
T TIGR02539 89 EGDWVVLDGLAHYTSYVAAERAGLNVKEVPHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPDAG-- 166 (370)
T ss_pred CCCEEEECCcccHHHHHHHHHcCCEEEEEecCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccCHH--
Confidence 9999999888855444678899999999997544568899999999986421 2567889999999999977755
Q ss_pred HHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecCCHHHHhhhhh
Q 012238 252 EKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARCCE 331 (467)
Q Consensus 252 ~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~ 331 (467)
+|+++|+++|+++|+||+|.....+ .+. ... ...++++|+||.++ +|.|+||++ .++++++.
T Consensus 167 -~i~~la~~~~~~livDea~~~g~~~---~~~------~~~-~~di~v~s~sK~~~-~~g~~G~l~---~~~~~i~~--- 228 (370)
T TIGR02539 167 -KVAKVCREKGVPLLLNCAYTVGRMP---VSA------KEI-GADFIVGSGHKSMA-ASGPCGVLG---MSEEWEDI--- 228 (370)
T ss_pred -HHHHHHHHcCCeEEEECccccCCcC---CCH------HHc-CCCEEEeeCccccc-CCCCEEEEE---ECHHHHhh---
Confidence 6667799999999999998764321 111 112 23466799999999 577899995 67888887
Q ss_pred hhHHHHHHHHHhhccCccC--------CCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCC
Q 012238 332 VAVIQVKSQLKRLARPMYS--------NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGK 403 (467)
Q Consensus 332 ~~~~~~~~~l~~~~~~~~~--------~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~~~ 403 (467)
+.....++.. ......+.++..++.+ ..+.++...+.++. ++++.+.|+ ++|+
T Consensus 229 ---------l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~------~~~~l~~~~~~~~~-~~~l~~~L~-~~g~-- 289 (370)
T TIGR02539 229 ---------VLRKSRYSPVKEVELLGCTSRGAPIVTMMASFPH------VVERVKRWDEEVKK-TRWFVAELE-DIGF-- 289 (370)
T ss_pred ---------hcccccCCccceeeeecccccccHHHHHHHHHHH------HHHHHHHHHHHHHH-HHHHHHHHH-hCCc--
Confidence 5444332111 1111122222223321 12234444444444 457999998 8873
Q ss_pred Cccc--ccCCcceEEecCCC------------HHHHHHHHHcccEE-EeCCC----eEEeccCChhhHHHHHHHHHHHHH
Q 012238 404 DWSF--ILRQIGMFSFTGLN------------KAQSDNMTNKWHVY-MTKDG----RISLAGLSLAKCEYLADAIIDSYH 464 (467)
Q Consensus 404 ~~~~--~~~~~g~f~~~~l~------------~~~~~~ll~~~gI~-v~~gg----Ris~~~~~~~~i~~~~~~l~~~l~ 464 (467)
+. ..+..+.|+++... ...+.+.|.++||. ++++. ||++...+++++++++++|+++++
T Consensus 290 --~~~~~~~s~t~~v~~~~~~~~~~~~~~~~~~~~~~~~L~e~GI~~ir~~~~~~iRis~~~~t~e~i~~l~~~L~~~~~ 367 (370)
T TIGR02539 290 --IQLGQKPKEHDLVKFETPGFHEIAQKHKRRGYFLYEELKKRGIHGIRSGQTKYFKLSVYGLTKEQVEYVVDSFEEIVE 367 (370)
T ss_pred --EEEccCCCcCceEEEECCchhHHhhhhccccHHHHHHHHhCCCccccCCcceEEEEEecCCCHHHHHHHHHHHHHHHH
Confidence 43 22334556655321 12344445556997 77763 888644588999999999999987
Q ss_pred hc
Q 012238 465 NV 466 (467)
Q Consensus 465 ~~ 466 (467)
++
T Consensus 368 ~~ 369 (370)
T TIGR02539 368 EY 369 (370)
T ss_pred hc
Confidence 64
No 134
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.94 E-value=3.1e-24 Score=217.21 Aligned_cols=335 Identities=13% Similarity=0.065 Sum_probs=215.6
Q ss_pred CcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCC----cCC----CCcchHHHHHHHHHHHhCCCCcccccCceeee
Q 012238 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENK----EYL----PIEGLAAFNKVTAELLFGADNSVLKEQRVATV 155 (467)
Q Consensus 84 ~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~----~Y~----~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~ 155 (467)
+++-|..+ +..++++.+.+++.+.+...... .|. ...-.+++|+++|++++.. ++++|++
T Consensus 23 ~~iYld~a------~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~-----~~~~v~~- 90 (406)
T PRK09295 23 PLAYLDSA------ASAQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINAR-----SAEELVF- 90 (406)
T ss_pred ceEEEeCc------ccccCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCcC-----CCCeEEE-
Confidence 34555544 44455888999988877431101 110 0123678999999997542 2678999
Q ss_pred ecCCchhHHHHHHHHHH--HhCCCCEEEEcCCCCcc----hHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCC
Q 012238 156 QGLSGTGSLRLAAALIE--RYFPGAKVLISSPTWGN----HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGG 229 (467)
Q Consensus 156 ~t~ggt~al~l~~~~l~--~~~~gd~Vlv~~P~y~~----~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 229 (467)
|.|+|+++++++..+. .+.+||+|+++++.|+. |...++..|++++.++.+ .++.+|++.+++.++ ++
T Consensus 91 -t~g~t~~l~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~l~~~i~---~~ 164 (406)
T PRK09295 91 -VRGTTEGINLVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLN--PDGTLQLETLPALFD---ER 164 (406)
T ss_pred -eCCHHHHHHHHHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecC--CCCCCCHHHHHHhcC---CC
Confidence 9999999998743321 34689999999988753 455667889999999884 356789999999887 57
Q ss_pred cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccC
Q 012238 230 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY 309 (467)
Q Consensus 230 ~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~ 309 (467)
++++++++++||||.+++.+ +|+++|+++|+++++|++|..... .. + + ......+++.|++|.+|++
T Consensus 165 t~lv~l~~~~n~tG~~~~~~---~i~~~~~~~~~~vivD~a~~~g~~-~~--~---~----~~~~~D~~~~s~~K~~gp~ 231 (406)
T PRK09295 165 TRLLAITHVSNVLGTENPLA---EMIALAHQHGAKVLVDGAQAVMHH-PV--D---V----QALDCDFYVFSGHKLYGPT 231 (406)
T ss_pred cEEEEEecchhcccccCCHH---HHHHHHHHcCCEEEEEcccccCcc-cc--C---c----hhcCCCEEEeehhhccCCC
Confidence 88999999999999999865 677779999999999999754322 11 1 1 1112357789999999977
Q ss_pred CCccceEEEecCCHHHHhhhhhhhHHH--HHH--HHHh-------hccCccCCCchHHHHHHHHHhCChhhHHHHHHHHH
Q 012238 310 AERIGAMNVVCSSSDLAARCCEVAVIQ--VKS--QLKR-------LARPMYSNPPVHGARIVANVVGNPALFDEWKAEME 378 (467)
Q Consensus 310 G~RiG~~~~v~~~~~~~~~~~~~~~~~--~~~--~l~~-------~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~ 378 (467)
| +||++ .++++++.. ++-.+. ... .... ..+.....++..+..++..+++. .. +..++
T Consensus 232 G--~G~l~---~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~---~~--~~g~~ 300 (406)
T PRK09295 232 G--IGILY---VKEALLQEM-PPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDY---VS--ALGLN 300 (406)
T ss_pred C--cEEEE---EchHhHhhC-CCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHH---HH--HhCHH
Confidence 7 69986 455555430 000000 000 0000 00011112333333333333321 10 11356
Q ss_pred HHHHHHHHHHHHHHHHhhhccCCCCCcccccC--CcceEEec--CCCHHHHHHHHHcccEEEeCC--------------C
Q 012238 379 MMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR--QIGMFSFT--GLNKAQSDNMTNKWHVYMTKD--------------G 440 (467)
Q Consensus 379 ~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~--~~g~f~~~--~l~~~~~~~ll~~~gI~v~~g--------------g 440 (467)
.+.++.++.++++.+.|. +++. ++...+ ..+++.|. +.+.+.+...|+++||.+..| |
T Consensus 301 ~i~~~~~~l~~~l~~~l~-~~~~---~~~~~~~~~~~iv~~~~~~~~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~~~~ 376 (406)
T PRK09295 301 NIAEYEQNLMHYALSQLE-SVPD---LTLYGPQNRLGVIAFNLGKHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPA 376 (406)
T ss_pred HHHHHHHHHHHHHHHHHh-cCCC---EEEeCCCCCceEEEEEECCcCHHHHHHHHHhCCeEEeccccchHHHHHHHCCCC
Confidence 677888888899999987 6531 344433 24555442 445555555677889999764 2
Q ss_pred --eEEeccC-ChhhHHHHHHHHHHHHH
Q 012238 441 --RISLAGL-SLAKCEYLADAIIDSYH 464 (467)
Q Consensus 441 --Ris~~~~-~~~~i~~~~~~l~~~l~ 464 (467)
|||++.. +++|+++++++|+++..
T Consensus 377 ~iRiS~~~ynt~~did~l~~~l~~i~~ 403 (406)
T PRK09295 377 MCRASLAMYNTHEEVDRLVAGLQRIHR 403 (406)
T ss_pred EEEEEccCCCCHHHHHHHHHHHHHHHH
Confidence 9998765 56899999999998754
No 135
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.94 E-value=4.8e-24 Score=211.56 Aligned_cols=319 Identities=17% Similarity=0.097 Sum_probs=209.7
Q ss_pred CcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCC--CcC----CCCcchHHHHHHHHHHHhCCCCcccccCceeeeec
Q 012238 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGEN--KEY----LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQG 157 (467)
Q Consensus 84 ~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~--~~Y----~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t 157 (467)
.+++|+...| -|.+. +|.|.+++.+.++.... ..| .......++++.+++++.. ++. ++ +
T Consensus 2 ~~~~~~~~~~---~~~~~-~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~-------~~~-iv--~ 67 (349)
T cd06454 2 KVLNFCSNDY---LGLAN-HPEVIEAAKEALDKYGVGAGGSRLISGTSDLHEELEEELAEFHGK-------EAA-LV--F 67 (349)
T ss_pred CceecccCCc---cccCC-CHHHHHHHHHHHHHhCCCCCCcCeecCCchHHHHHHHHHHHHhCC-------CCE-EE--e
Confidence 3567776655 24454 57899999998854210 112 2234457888888888642 233 44 4
Q ss_pred CCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcC--CCCcEEEEe
Q 012238 158 LSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA--PGGSFILLH 235 (467)
Q Consensus 158 ~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~--~~~~~~i~i 235 (467)
.+|++++..+ +...+.+||+|+++.|+|..+...++..|++++.++. +|++.+++.+++. +.+++++++
T Consensus 68 ~sg~~a~~~~--~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-------~~~~~le~~i~~~~~~~~~~~v~~ 138 (349)
T cd06454 68 SSGYAANDGV--LSTLAGKGDLIISDSLNHASIIDGIRLSGAKKRIFKH-------NDMEDLEKLLREARRPYGKKLIVT 138 (349)
T ss_pred ccHHHHHHHH--HHHhcCCCCEEEEehhhhHHHHHHHHHcCCceEEecC-------CCHHHHHHHHHHhhccCCCeEEEE
Confidence 6667777765 3445679999999999999998888999999887753 5778888888753 246788889
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHH-HhcCCeEEEEecCccCcccCCCccc
Q 012238 236 GCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF-ATRGMELLVAQSYSKNLGLYAERIG 314 (467)
Q Consensus 236 ~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~S~SK~~~~~G~RiG 314 (467)
++++||||...+ +++|+++|+++|+++|+|++|.....+. ........ ......+++++|+||.++++| |
T Consensus 139 ~~~~~~tG~~~~---~~~i~~~~~~~~~~livD~a~~~g~~~~---~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g---G 209 (349)
T cd06454 139 EGVYSMDGDIAP---LPELVDLAKKYGAILFVDEAHSVGVYGP---HGRGVEEFGGLTDDVDIIMGTLGKAFGAVG---G 209 (349)
T ss_pred eccccCCCCccC---HHHHHHHHHHcCCEEEEEccccccccCC---CCCChhhhccccccCcEEEeechhhhcccC---C
Confidence 999999999876 4577788999999999999986432221 10011111 122346799999999998755 8
Q ss_pred eEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCc--cCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 012238 315 AMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPM--YSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLF 392 (467)
Q Consensus 315 ~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~ 392 (467)
|++ .++++.+. +....... ....+...+.++...|+.. .+ ....+++++++++.+.
T Consensus 210 ~i~---~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~a~~~~l~~~------~~-~~~~~~~~~~~~~~l~ 267 (349)
T cd06454 210 YIA---GSKELIDY------------LRSYARGFIFSTSLPPAVAAAALAALEVL------QG-GPERRERLQENVRYLR 267 (349)
T ss_pred EEE---CCHHHHHH------------HHHhchhhhccCCCCHHHHHHHHHHHHHH------hc-CHHHHHHHHHHHHHHH
Confidence 885 67777766 33322211 1233344444444444211 11 3466788899999999
Q ss_pred HHhhhccCCCCCcccccCCcceEEec-C---CC-HHHHHHHHHcccEEEeCC---------C--eEEecc-CChhhHHHH
Q 012238 393 DSLSAKDKSGKDWSFILRQIGMFSFT-G---LN-KAQSDNMTNKWHVYMTKD---------G--RISLAG-LSLAKCEYL 455 (467)
Q Consensus 393 ~~l~~~~g~~~~~~~~~~~~g~f~~~-~---l~-~~~~~~ll~~~gI~v~~g---------g--Ris~~~-~~~~~i~~~ 455 (467)
+.|. ++| +....+.++++.+. . .+ .++.+.++++ ||.+.++ + ||+++. .++++++++
T Consensus 268 ~~l~-~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~-gI~~~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~ 341 (349)
T cd06454 268 RGLK-ELG----FPVGGSPSHIIPPLIGDDPAKAVAFSDALLER-GIYVQAIRYPTVPRGTARLRISLSAAHTKEDIDRL 341 (349)
T ss_pred HHHH-hcC----CcccCCCCCcEEEEeCCChHHHHHHHHHHHhC-CceEEEecCCccCCCCCeEEEEEeCCCCHHHHHHH
Confidence 9998 776 34444444444332 1 12 2345566554 9998752 2 898874 478999999
Q ss_pred HHHHHHH
Q 012238 456 ADAIIDS 462 (467)
Q Consensus 456 ~~~l~~~ 462 (467)
+++|+++
T Consensus 342 ~~~l~~~ 348 (349)
T cd06454 342 LEALKEV 348 (349)
T ss_pred HHHHHHh
Confidence 9999864
No 136
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.94 E-value=6.8e-24 Score=214.70 Aligned_cols=326 Identities=14% Similarity=0.089 Sum_probs=218.7
Q ss_pred CCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCC--C--cCC----CCcchHHHHHHHHHHHhCCCCcccccCceee
Q 012238 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGEN--K--EYL----PIEGLAAFNKVTAELLFGADNSVLKEQRVAT 154 (467)
Q Consensus 83 ~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~--~--~Y~----~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~ 154 (467)
.+++-|..|.. + ++++.+.+++.+.+..... . .+. ...+++++|+.++++++.. .+++|++
T Consensus 17 ~~~~yld~~~~----~--~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~~~-----~~~~v~~ 85 (403)
T TIGR01979 17 KPLVYLDSAAT----S--QKPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFINAA-----SDEEIVF 85 (403)
T ss_pred CceEEEeCccc----c--CCCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCcC-----CCCeEEE
Confidence 35677776654 3 3478888888877643110 1 111 1235779999999997543 1468988
Q ss_pred eecCCchhHHHHHHHHHH--HhCCCCEEEEcCCCCcc----hHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCC
Q 012238 155 VQGLSGTGSLRLAAALIE--RYFPGAKVLISSPTWGN----HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPG 228 (467)
Q Consensus 155 ~~t~ggt~al~l~~~~l~--~~~~gd~Vlv~~P~y~~----~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~ 228 (467)
|.|+++++.+++..+. .+.+||+|+++++.|+. +...++..|++++.++.+ +++.+|++.+++.+. +
T Consensus 86 --~~g~t~~l~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~--~~~~~~~~~l~~~i~---~ 158 (403)
T TIGR01979 86 --TRGTTESINLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGATLKFIPLD--DDGTLDLDDLEKLLT---E 158 (403)
T ss_pred --eCCHHHHHHHHHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEecC--CCCCCCHHHHHHHhc---c
Confidence 9999999998743322 24689999999998764 445666789999999884 456799999999987 5
Q ss_pred CcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCccc
Q 012238 229 GSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGL 308 (467)
Q Consensus 229 ~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~ 308 (467)
+++++++++++||||..++.+ +|.++|+++|+++|+|++|..... . .+ + ......+++.|++|.+|+
T Consensus 159 ~~~lv~~~~~~~~tG~~~~~~---~i~~~~~~~~~~~ivD~a~~~g~~-~--~~---~----~~~~~d~~~~s~~K~~gp 225 (403)
T TIGR01979 159 KTKLVAITHVSNVLGTVNPVE---EIAKLAHQVGAKVLVDGAQAVPHM-P--VD---V----QALDCDFYVFSGHKMYGP 225 (403)
T ss_pred CCeEEEEEcccccccccCCHH---HHHHHHHHcCCEEEEEchhhcCcc-c--cC---c----cccCCCEEEEecccccCC
Confidence 788999999999999999955 677779999999999999753221 1 11 1 111345889999999987
Q ss_pred CCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhc---------------------cCccCCCchHHHHHHHHHhCCh
Q 012238 309 YAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLA---------------------RPMYSNPPVHGARIVANVVGNP 367 (467)
Q Consensus 309 ~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~---------------------~~~~~~~~~~~~~~~~~~L~~~ 367 (467)
+| +|+++ .++++++. +.... +.....++.....++..+++
T Consensus 226 ~G--~g~l~---~~~~~~~~------------~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~-- 286 (403)
T TIGR01979 226 TG--IGVLY---GKEELLEQ------------MPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAID-- 286 (403)
T ss_pred CC--ceEEE---EchHHHhc------------CCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHH--
Confidence 77 78885 45565554 21110 00011233333333333331
Q ss_pred hhHHHHHH-HHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCC-----cceEEec--CCCHHHHHHHHHcccEEEeCC
Q 012238 368 ALFDEWKA-EMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQ-----IGMFSFT--GLNKAQSDNMTNKWHVYMTKD 439 (467)
Q Consensus 368 ~~~~~~~~-~l~~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~~-----~g~f~~~--~l~~~~~~~ll~~~gI~v~~g 439 (467)
+ +.+ ..++.+++..+.++.+.+.|+ .++ ++++..+. ++++.|. +.+.+.+.+.++++||.+.+|
T Consensus 287 -~---~~~~g~~~~~~~~~~l~~~l~~~l~-~~~---g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~g 358 (403)
T TIGR01979 287 -Y---LEAIGLENIEAHEHELTAYALERLG-EIP---GLRIYGPRDAEDRGGIISFNVEGVHPHDVGTILDEEGIAVRSG 358 (403)
T ss_pred -H---HHHhCHHHHHHHHHHHHHHHHHHHh-cCC---CEEEeCCCCccccCceEEEEeCCcCHHHHHHHHhhCCEEEcch
Confidence 1 111 245677888888999999888 653 15555443 5554443 445555566677789998753
Q ss_pred --------------C--eEEeccC-ChhhHHHHHHHHHHHHHhc
Q 012238 440 --------------G--RISLAGL-SLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 440 --------------g--Ris~~~~-~~~~i~~~~~~l~~~l~~~ 466 (467)
| |||++.. +++++++++++|+++++.+
T Consensus 359 ~~~~~~~~~~~~~~~~iRiS~~~~~t~~di~~l~~~l~~~~~~~ 402 (403)
T TIGR01979 359 HHCAQPLMRRFGVPATCRASFYIYNTEEDIDALVEALKKVRKFF 402 (403)
T ss_pred hhhhHHHHHHhCCCCEEEEEeccCCCHHHHHHHHHHHHHHHHHh
Confidence 2 9998754 6689999999999988765
No 137
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.93 E-value=3.7e-24 Score=201.86 Aligned_cols=314 Identities=19% Similarity=0.149 Sum_probs=203.6
Q ss_pred CcC-CCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHh---C-C----------CCEEEEcC
Q 012238 120 KEY-LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY---F-P----------GAKVLISS 184 (467)
Q Consensus 120 ~~Y-~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~---~-~----------gd~Vlv~~ 184 (467)
.+| +...|++++|+.+|+.|.-. +++|++ ||+.+++++..++... . + .-+.++|.
T Consensus 62 RNY~G~l~Gipe~r~l~a~llgv~------~~~viv----~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPv 131 (425)
T PF12897_consen 62 RNYPGGLDGIPEARELFAELLGVP------PENVIV----GGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPV 131 (425)
T ss_dssp TSS-S-SS--HHHHHHHHHHHTS-------GGGEEE-----SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEE
T ss_pred cCCCCccCChHHHHHHHHHHhCCC------HHHEEE----eccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecC
Confidence 679 88999999999999998654 788854 5666677654443321 0 1 13789999
Q ss_pred CCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHH-HHhcCC
Q 012238 185 PTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADV-IQEKNH 263 (467)
Q Consensus 185 P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~-~~~~~~ 263 (467)
|+|..+..+++.+|++.+.||+.++ |+|+|.+++.+.+.+..+-+.+++..+||||++|+.|..++|+++ +...+.
T Consensus 132 PGYDRHFai~E~~Giemi~VpM~~d---GPDmD~Ve~LV~~D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DF 208 (425)
T PF12897_consen 132 PGYDRHFAITEHFGIEMIPVPMTED---GPDMDMVEELVAEDPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDF 208 (425)
T ss_dssp S--HHHHHHHHHCT-EEEEEEEETT---EE-HHHHHHHTHTSTTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-
T ss_pred CCchHHHHHHHhhCcEEEecCCCCC---CCCHHHHHHHHhcCCccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCe
Confidence 9999999999999999999999743 699999999998766666788888899999999999999999988 345899
Q ss_pred eeEEeccCCCCCC-CCCCCCh-hHHHHHH---hcCCeEEEEecCccCcccCCCccceEEEecCCHHHHhhhhhhhHHHHH
Q 012238 264 IPFFDVAYQGFAS-GSLDNDA-SSVRLFA---TRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVK 338 (467)
Q Consensus 264 ~li~Deay~~~~~-~~~~~~~-~~~~~~~---~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~ 338 (467)
.|+.|++|.-... ++.+.+. ..+.... ...++++...|.||.- .||-+++++. ++++.++.
T Consensus 209 RI~WDNAY~vHhL~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKIT-f~GaGva~~a---aS~~Nl~~---------- 274 (425)
T PF12897_consen 209 RIFWDNAYAVHHLYDEEPRDALLNILDACAKAGNPDRVYVFASTSKIT-FPGAGVAFFA---ASEANLAW---------- 274 (425)
T ss_dssp EEEEE-TTTT-BSSSSSS------HHHHHHHTT-TTSEEEEEESTTTS--TTSS-EEEE---E-HHHHHH----------
T ss_pred EEEeecCceEeeccccccchhhhHHHHHHHHcCCCCeEEEEecccccc-cCCcceeeee---cCHHHHHH----------
Confidence 9999999974433 2111111 1222222 2346999999999976 5999999994 88888887
Q ss_pred HHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC-CCCCcccccCCcceEEe
Q 012238 339 SQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK-SGKDWSFILRQIGMFSF 417 (467)
Q Consensus 339 ~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g-~~~~~~~~~~~~g~f~~ 417 (467)
+++.......++.-+.|..-..++.+.+ ...++++++.++.++-+.+.+.+.|.++++ ..+--++..|.||||++
T Consensus 275 --~~~~~~~~tIgpdKvNQLRHvrff~d~~--gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~ia~Wt~P~GGYFIs 350 (425)
T PF12897_consen 275 --IKKHLSVQTIGPDKVNQLRHVRFFKDAE--GGVRAHMRKHAAILRPKFEAVLEILEEELGDGLGIASWTKPKGGYFIS 350 (425)
T ss_dssp --HHHHHHHH-S---HHHHHHHHHHHHSHH--THHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGGTSEEE---SBSS-EE
T ss_pred --HHHHhcCceeCccHHHHHHHHHHhcChh--hHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCCeeEecCCCCceEEE
Confidence 4433343456778888888888887642 122567888888888888888888875666 22224677899999998
Q ss_pred cCC---CHHHHHHHHHcccEEEeCCC--------------eEEeccCChhhHHHHHHHHHHHHH
Q 012238 418 TGL---NKAQSDNMTNKWHVYMTKDG--------------RISLAGLSLAKCEYLADAIIDSYH 464 (467)
Q Consensus 418 ~~l---~~~~~~~ll~~~gI~v~~gg--------------Ris~~~~~~~~i~~~~~~l~~~l~ 464 (467)
++. +.+.+-++.++.||.++|.| ||+.+..+.++++.+++.+.-+++
T Consensus 351 ld~~~G~AkrvV~lakeAGV~LT~AGAtfPyg~DP~D~nIRiAPS~P~leel~~Am~~~~~cv~ 414 (425)
T PF12897_consen 351 LDVLDGTAKRVVELAKEAGVALTPAGATFPYGKDPRDSNIRIAPSYPSLEELETAMDVFATCVK 414 (425)
T ss_dssp EEESTT-HHHHHHHHHHTTEE---TTTTSGGG--TTS-EEEE--SSS-HHHHHHHHHHHHHHHH
T ss_pred EecCCChHHHHHHHHHHhCceeCCCCCCCCCCCCCCCCcEEecCCCCCHHHHHHHHHHHHHHHH
Confidence 854 55667778888999999954 999887788999999998877765
No 138
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.93 E-value=8.7e-24 Score=212.72 Aligned_cols=337 Identities=12% Similarity=0.055 Sum_probs=214.3
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCC--CcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCC
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGEN--KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 159 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~--~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g 159 (467)
+...+||..|..-..-|. -.|.+.+++.+.++.... ..| ......++.+.++++. + .+++++ ++|
T Consensus 30 G~~~lD~~~g~~~~~lGh--~~p~v~~a~~~~~~~~~~~~~~~-~~~~~~~la~~l~~~~----~----~~~v~~--~~s 96 (389)
T PRK01278 30 GERYLDFASGIAVNSLGH--AHPHLVEALKEQAEKLWHVSNLY-RIPEQERLAERLVENS----F----ADKVFF--TNS 96 (389)
T ss_pred CCEEEECCccHhhccCCC--CCHHHHHHHHHHHHhcCcccccc-CChHHHHHHHHHHhhC----C----CCEEEE--cCC
Confidence 457899988754222243 367888888887754211 112 2223334444444442 1 358888 999
Q ss_pred chhHHHHHHHHHHH--hCCCC----EEEEcCCCCcchHHHHhhCCCCeEEeeeec--CCCCC----CChhhHHHHHHcCC
Q 012238 160 GTGSLRLAAALIER--YFPGA----KVLISSPTWGNHKNIFNDARVPWSEYRYYD--PKTVG----LDFEGMIADIKAAP 227 (467)
Q Consensus 160 gt~al~l~~~~l~~--~~~gd----~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~--~~~~~----~d~~~l~~~l~~~~ 227 (467)
|++|++.+.++... ..+|| +|++.+++|..+.......+......+... ..++. .|++.+++.++
T Consensus 97 GseA~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~--- 173 (389)
T PRK01278 97 GAEAVECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFGDIEALKAAIT--- 173 (389)
T ss_pred cHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCCCCHHHHHHhhC---
Confidence 99999998554433 23676 999999999988766655444332221100 11111 58999999886
Q ss_pred CCcEEEEeCCCCCCCC-CCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCc
Q 012238 228 GGSFILLHGCAHNPTG-IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL 306 (467)
Q Consensus 228 ~~~~~i~i~~p~NPTG-~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~ 306 (467)
++++++++..++||+| ..++.+.+++|.++|++||+++|+||+|.++...+. .... ......++ +.+|||.+
T Consensus 174 ~~~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~---~~~~-~~~~~~pd---i~t~sK~l 246 (389)
T PRK01278 174 PNTAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGK---LFAH-EWAGVTPD---IMAVAKGI 246 (389)
T ss_pred CCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCc---ceee-cccCCCCC---EEEEehhc
Confidence 4678888888899999 788999999999999999999999999998865321 1111 01111122 35899999
Q ss_pred ccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHH
Q 012238 307 GLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKN 386 (467)
Q Consensus 307 ~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~ 386 (467)
+ +|+|+||++ +++++++. +.......+.+.+.+.|.++...|+.-. .+.+.+.++++.+++++
T Consensus 247 ~-~G~~ig~~~---~~~~~~~~------------~~~~~~~~t~~~~~~~~aaa~a~l~~l~-~~~~~~~~~~~~~~l~~ 309 (389)
T PRK01278 247 G-GGFPLGACL---ATEEAAKG------------MTPGTHGSTYGGNPLAMAVGNAVLDVIL-APGFLDNVQRMGLYLKQ 309 (389)
T ss_pred c-CCcceEEEE---EcHHHHhc------------cCCCCCCCCCCccHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHH
Confidence 9 899999995 67777766 5444444444677777877766653210 11122334455555544
Q ss_pred HHHHHHHHhhhccCCCCCcccccCCcceEEecCC---CHHHHHHHHHcccEEEeCCC----eEEecc-CChhhHHHHHHH
Q 012238 387 VRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL---NKAQSDNMTNKWHVYMTKDG----RISLAG-LSLAKCEYLADA 458 (467)
Q Consensus 387 ~r~~l~~~l~~~~g~~~~~~~~~~~~g~f~~~~l---~~~~~~~ll~~~gI~v~~gg----Ris~~~-~~~~~i~~~~~~ 458 (467)
+.+.+.+ ..+ .-+....+ .|+++|+.+ +.+++++++++ ||.+.|++ ||+++. .+++++++++++
T Consensus 310 ~l~~l~~----~~~--~~~~~v~g-~G~~~~i~~~~~~~~~~~~l~~~-GV~~~p~~~~~lR~~p~~~~~~~~i~~~l~~ 381 (389)
T PRK01278 310 KLEGLVD----RFP--DVIEEVRG-KGLLLGLKCVVPNRDLVQALRDE-GLLTVGAGDNVVRLLPPLIITEEEIDEALER 381 (389)
T ss_pred HHHHHHh----hCC--CceeeEec-ccEEEEEEEecCHHHHHHHHHHC-CeEEeecCCCEEEEeCCcccCHHHHHHHHHH
Confidence 4443322 221 00222334 456666543 34567777775 99999875 888642 488999999999
Q ss_pred HHHHHHhc
Q 012238 459 IIDSYHNV 466 (467)
Q Consensus 459 l~~~l~~~ 466 (467)
|+++++++
T Consensus 382 l~~~l~~~ 389 (389)
T PRK01278 382 LERAAESL 389 (389)
T ss_pred HHHHHHhC
Confidence 99998764
No 139
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.93 E-value=1.2e-23 Score=212.41 Aligned_cols=328 Identities=13% Similarity=0.050 Sum_probs=215.6
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcC--CCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCC
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG--ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 159 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~--~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g 159 (467)
+.+.|||..|..-+.-+. .+|.+.+++.+.+... ....|....+ .++.+.+++++... .++++++ ++|
T Consensus 42 g~~~lD~~s~~~~~~lG~--~~p~v~~ai~~~~~~~~~~~~~~~~~~~-~~la~~l~~~~~~~-----~~~~v~~--~~s 111 (398)
T PRK03244 42 GKEYLDLLGGIAVNALGH--AHPAVVEAVTRQLATLGHVSNLFATEPQ-IALAERLVELLGAP-----EGGRVFF--CNS 111 (398)
T ss_pred CCEEEECCcCHhhccCCC--CCHHHHHHHHHHHHhccCccCccCCHHH-HHHHHHHHHhCCCC-----CCCEEEE--eCc
Confidence 457899998865222232 2678888888877542 1134643333 46666777664211 2468988 999
Q ss_pred chhHHHHHHHHHHHhCCC-CEEEEcCCCCcchHHHHh-hCCC------------CeEEeeeecCCCCCCChhhHHHHHHc
Q 012238 160 GTGSLRLAAALIERYFPG-AKVLISSPTWGNHKNIFN-DARV------------PWSEYRYYDPKTVGLDFEGMIADIKA 225 (467)
Q Consensus 160 gt~al~l~~~~l~~~~~g-d~Vlv~~P~y~~~~~~~~-~~G~------------~~~~v~~~~~~~~~~d~~~l~~~l~~ 225 (467)
|++++..+.++... +| ++|+..+++|..+..... ..|. ++..+|. .|++.+++.+.
T Consensus 112 gsea~~~al~~~~~--~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~~~- 181 (398)
T PRK03244 112 GAEANEAAFKLARL--TGRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPY-------GDVDALAAAVD- 181 (398)
T ss_pred hHHHHHHHHHHHHH--HCCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCC-------CCHHHHHHhhc-
Confidence 99999998554332 44 578888889987744333 2221 1222222 37889988885
Q ss_pred CCCCcEEEEeCCCCCCCCCCCCHHH-HHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCcc
Q 012238 226 APGGSFILLHGCAHNPTGIDPTPEQ-WEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSK 304 (467)
Q Consensus 226 ~~~~~~~i~i~~p~NPTG~~~~~~~-l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK 304 (467)
+++.++++.+++||||.+++.++ +++|.++|++||+++|+||+|.++...+ ..+.. ......+++ .+|||
T Consensus 182 --~~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g---~~~~~-~~~~~~pDi---~t~sK 252 (398)
T PRK03244 182 --DDTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTG---AWFAH-QHDGVTPDV---VTLAK 252 (398)
T ss_pred --CCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccc---hHHhh-hhhCCCCCE---EEEch
Confidence 46778888999999999997655 9999999999999999999998875432 11111 111222343 37899
Q ss_pred CcccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q 012238 305 NLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRI 384 (467)
Q Consensus 305 ~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~ 384 (467)
.++ +|+|+||++ .++++++. +.........+.+.+++.++...|+.- . -++..+++
T Consensus 253 ~l~-~G~~ig~~~---~~~~~~~~------------~~~~~~~~t~~~~~~~~aaa~a~l~~~------~--~~~~~~~~ 308 (398)
T PRK03244 253 GLG-GGLPIGACL---AFGPAADL------------LTPGLHGSTFGGNPVACAAALAVLDTI------A--SEGLLENA 308 (398)
T ss_pred hhh-CCcccEEEE---EcHHHHhh------------ccCCCCcCCCCCCHHHHHHHHHHHHHH------H--hccHHHHH
Confidence 999 899999996 66777776 443323334456677777777765411 1 11345666
Q ss_pred HHHHHHHHHHhhhccCCCCCcccccCCcceEEecCCC----HHHHHHHHHcccEEEeCCC----eEEecc-CChhhHHHH
Q 012238 385 KNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLN----KAQSDNMTNKWHVYMTKDG----RISLAG-LSLAKCEYL 455 (467)
Q Consensus 385 ~~~r~~l~~~l~~~~g~~~~~~~~~~~~g~f~~~~l~----~~~~~~ll~~~gI~v~~gg----Ris~~~-~~~~~i~~~ 455 (467)
+++++++.+.|+ +++.+. +.... ..|.++|+.+. .++.+++++ +||.+.+.+ ||+++. .++++++++
T Consensus 309 ~~~~~~l~~~L~-~~~~~~-~~~v~-g~g~~~~i~~~~~~~~~~~~~l~~-~Gv~~~~~~~~~iR~~p~~~~t~~~i~~~ 384 (398)
T PRK03244 309 ERLGEQLRAGIE-ALGHPL-VDHVR-GRGLLLGIVLTAPVAKAVEAAARE-AGFLVNAVAPDVIRLAPPLIITDAQVDAF 384 (398)
T ss_pred HHHHHHHHHHHH-hcCCCc-eeeEe-eccEEEEEEEeccHHHHHHHHHHH-CCeEEeecCCCEEEEECCCcCCHHHHHHH
Confidence 677788888888 765321 11222 35667777552 234455554 699998754 888665 588999999
Q ss_pred HHHHHHHHHhc
Q 012238 456 ADAIIDSYHNV 466 (467)
Q Consensus 456 ~~~l~~~l~~~ 466 (467)
+++|+++++++
T Consensus 385 ~~~l~~~l~~~ 395 (398)
T PRK03244 385 VAALPAILDAA 395 (398)
T ss_pred HHHHHHHHHhc
Confidence 99999998764
No 140
>PRK07049 methionine gamma-lyase; Validated
Probab=99.93 E-value=2.4e-23 Score=210.31 Aligned_cols=221 Identities=18% Similarity=0.161 Sum_probs=167.0
Q ss_pred CCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHH----hhCCC
Q 012238 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF----NDARV 199 (467)
Q Consensus 124 ~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~----~~~G~ 199 (467)
+......|++++|++.. .+++++ +.||++++.++ +...+.+||+|+++.|+|+.+...+ +..|+
T Consensus 81 ~~Pt~~~Le~~lA~leg--------~~~~iv--~~sG~~Ai~~~--l~al~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi 148 (427)
T PRK07049 81 NHPNSEIVEDRLAVYEG--------AESAAL--FSSGMSAIATT--LLAFVRPGDVILHSQPLYGGTETLLAKTFRNFGV 148 (427)
T ss_pred CCcCHHHHHHHHHHHhC--------CCcEEE--EccHHHHHHHH--HHHHhCCCCEEEEcCCCcccHHHHHHHHHHhcCc
Confidence 55667899999999953 235666 79999998887 5567789999999999999997664 56788
Q ss_pred CeEEeeeecCCCCCCChhhHHHHHHcC--CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHh---cCCeeEEeccCCCC
Q 012238 200 PWSEYRYYDPKTVGLDFEGMIADIKAA--PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQE---KNHIPFFDVAYQGF 274 (467)
Q Consensus 200 ~~~~v~~~~~~~~~~d~~~l~~~l~~~--~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~---~~~~li~Deay~~~ 274 (467)
+++.++. ..|++.+++.+.+. .++++++++++|+||||.+++.+++.+|++.|++ +++++|+||+|...
T Consensus 149 ~~v~~~~------~~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~~ 222 (427)
T PRK07049 149 GAVGFAD------GLSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLGP 222 (427)
T ss_pred EEEEEeC------CCCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCcccc
Confidence 8776652 25778888777532 2468899999999999999999999999888654 68999999998765
Q ss_pred CCCCCCCChhHHHHHHhcCCeEEEEecCccCcc-cCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCc
Q 012238 275 ASGSLDNDASSVRLFATRGMELLVAQSYSKNLG-LYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPP 353 (467)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~-~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 353 (467)
... . ++ .. ...+++.|+||.++ .+|+|+||++ +++++++. +.........+.+
T Consensus 223 ~~~----~--pl----~~-g~divv~S~SK~~gG~~glr~G~vv---~~~~l~~~------------l~~~~~~~g~~ls 276 (427)
T PRK07049 223 VFQ----K--PL----EH-GADLSVYSLTKYVGGHSDLVAGAVL---GRKALIRQ------------VRALRSAIGTQLD 276 (427)
T ss_pred ccC----C--cc----cc-CCCEEEEcCceeecCCCCcEEEEEE---CCHHHHHH------------HHHHHHhcCCCCC
Confidence 431 1 11 11 34688999999999 6999999995 77888777 5555555555677
Q ss_pred hHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 012238 354 VHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD 399 (467)
Q Consensus 354 ~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~ 399 (467)
...+.++...|.. +..+.++..++++.+.+.|+ +.
T Consensus 277 ~~~a~l~~r~L~t----------l~~R~~~~~~~a~~la~~L~-~~ 311 (427)
T PRK07049 277 PHSCWMLGRSLET----------LVLRMERANRNARAVAEFLR-DH 311 (427)
T ss_pred HHHHHHHHcCCCh----------HHHHHHHHHHHHHHHHHHHH-hC
Confidence 7777777665542 33445666888888998888 54
No 141
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.93 E-value=1.6e-23 Score=213.08 Aligned_cols=326 Identities=15% Similarity=0.099 Sum_probs=214.0
Q ss_pred CcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCC-----CcCCC---CcchHHHHHHHHHHHhCCCCcccccCceeee
Q 012238 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGEN-----KEYLP---IEGLAAFNKVTAELLFGADNSVLKEQRVATV 155 (467)
Q Consensus 84 ~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~-----~~Y~~---~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~ 155 (467)
+++.|..+.. + +.++.+.+++.+.+..... ..|.. ....+++|+.++++++.. ++++|++
T Consensus 32 ~~iyLd~a~~----~--~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~-----~~~~v~~- 99 (424)
T PLN02855 32 KLVYLDNAAT----S--QKPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFINAS-----TSREIVF- 99 (424)
T ss_pred CeEEeeCccc----c--CCCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCC-----CCCEEEE-
Confidence 4677776654 3 3478889998887643110 11111 123578999999997653 1578999
Q ss_pred ecCCchhHHHHHHHHHH--HhCCCCEEEEcCCCCcc----hHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCC
Q 012238 156 QGLSGTGSLRLAAALIE--RYFPGAKVLISSPTWGN----HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGG 229 (467)
Q Consensus 156 ~t~ggt~al~l~~~~l~--~~~~gd~Vlv~~P~y~~----~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 229 (467)
|.|+|+++++++..+. .+.+||+|+++.+.|+. |...++..|++++.++++ .++.+|++.+++.++ ++
T Consensus 100 -t~g~t~al~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~--~~~~~~~~~l~~~i~---~~ 173 (424)
T PLN02855 100 -TRNATEAINLVAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLT--PDEVLDVEQLKELLS---EK 173 (424)
T ss_pred -eCCHHHHHHHHHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEEecC--CCCCcCHHHHHHHhc---cC
Confidence 9999999999743321 35689999999997763 455667889999999884 234599999999997 57
Q ss_pred cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccC
Q 012238 230 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY 309 (467)
Q Consensus 230 ~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~ 309 (467)
++++++++++||||.+++.+ +|+++|+++|+++++|++|.. .... .+ + ......+++.|++|.+|++
T Consensus 174 t~lv~i~~~~n~tG~~~~~~---~I~~l~~~~g~~vivD~a~~~-g~~~--~~---~----~~~~~d~~~~s~~K~~gp~ 240 (424)
T PLN02855 174 TKLVATHHVSNVLGSILPVE---DIVHWAHAVGAKVLVDACQSV-PHMP--VD---V----QTLGADFLVASSHKMCGPT 240 (424)
T ss_pred ceEEEEeCccccccccCCHH---HHHHHHHHcCCEEEEEhhhhc-CCcC--CC---c----hhcCCCEEEeecccccCCC
Confidence 88999999999999999976 667779999999999999742 1111 11 1 1112346799999988876
Q ss_pred CCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhc--------------------cCccCCCchHHH-HHHHHHhCChh
Q 012238 310 AERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLA--------------------RPMYSNPPVHGA-RIVANVVGNPA 368 (467)
Q Consensus 310 G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~--------------------~~~~~~~~~~~~-~~~~~~L~~~~ 368 (467)
| +||++ .++++++. +.... ..+..+.+.+.. .++..+++
T Consensus 241 G--~G~l~---~~~~~~~~------------~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~--- 300 (424)
T PLN02855 241 G--IGFLW---GKSDLLES------------MPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAID--- 300 (424)
T ss_pred c--cEEEE---Echhhhhc------------CCCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHH---
Confidence 6 79996 45556554 21110 001112233222 22222331
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccC-------CcceEEec--CCCHHHHHHHH-HcccEEEeC
Q 012238 369 LFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR-------QIGMFSFT--GLNKAQSDNMT-NKWHVYMTK 438 (467)
Q Consensus 369 ~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~-------~~g~f~~~--~l~~~~~~~ll-~~~gI~v~~ 438 (467)
+.. +..+++++++.++.++.+++.|+ ++. + ++.+.+ .+++..+. +.+.+.+.+.| +++||.+..
T Consensus 301 ~~~--~~g~~~i~~~~~~l~~~l~~~L~-~~~--g-~~i~~~~~~~~~~r~~~v~~~~~~~~~~~v~~~L~~~~gI~v~~ 374 (424)
T PLN02855 301 YLS--EIGMDRIHEYEVELGTYLYEKLS-SVP--G-VRIYGPKPSEGVGRAALCAFNVEGIHPTDLSTFLDQQHGVAIRS 374 (424)
T ss_pred HHH--HhCHHHHHHHHHHHHHHHHHHHh-cCC--C-EEEeCCCcccccCcccEEEEEECCcCHHHHHHHhcccCCEEEec
Confidence 111 12356778888888999999987 652 1 344422 23444332 45555554444 445999885
Q ss_pred C--------------C--eEEeccC-ChhhHHHHHHHHHHHHHhc
Q 012238 439 D--------------G--RISLAGL-SLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 439 g--------------g--Ris~~~~-~~~~i~~~~~~l~~~l~~~ 466 (467)
| + |||+... +++|+++++++|+++++++
T Consensus 375 g~~c~~~~~~~~g~~~~iRiS~~~ynt~~di~~l~~~l~~~~~~~ 419 (424)
T PLN02855 375 GHHCAQPLHRYLGVNASARASLYFYNTKEEVDAFIHALKDTIAFF 419 (424)
T ss_pred hhhhhHHHHHHhCCCCeEEEEeccCCCHHHHHHHHHHHHHHHHHH
Confidence 3 2 9998654 6699999999999998764
No 142
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.93 E-value=1e-23 Score=211.75 Aligned_cols=329 Identities=12% Similarity=0.074 Sum_probs=213.8
Q ss_pred cCCCCCCCCchHHHHHHHHHHHhcC-----CCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHH
Q 012238 93 YRTEELQPYVLDVVKKAENLMLERG-----ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLA 167 (467)
Q Consensus 93 ~~d~~~~p~~~~~v~~a~~~~~~~~-----~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~ 167 (467)
|+|..+.+++++.|++++.+..... ..+.| +..+.+.+++++++++.... . .++++|++ |+|++++++++
T Consensus 2 yld~aa~~~~~~~v~~~~~~~~~~~~~n~~~~~~~-~~~~~~~l~~a~~~~~~~~~-~-~~~~~i~~--t~g~teal~~~ 76 (382)
T TIGR03403 2 YLDNNATTMLDPKVKELMDPFFCDIYGNPNSLHQF-GTATHPAIAEALDKLYKGIN-A-RDLDDIII--TSCATESNNWV 76 (382)
T ss_pred cccCcCCCCCCHHHHHHHHHHHHhcCcCCccccHH-HHHHHHHHHHHHHHHHHHcC-c-CCCCeEEE--eCCHHHHHHHH
Confidence 4566666666889999998877431 11223 34567888998888864322 1 14689999 99999999987
Q ss_pred HHHHHH---hCC-CCEEEEcCCCCcchH---HHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCC
Q 012238 168 AALIER---YFP-GAKVLISSPTWGNHK---NIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN 240 (467)
Q Consensus 168 ~~~l~~---~~~-gd~Vlv~~P~y~~~~---~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~N 240 (467)
...+.. ..+ +++|+++.+.|+.+. ..++..|++++.+|++ .++.+|++.+++.++ ++++++++++|+|
T Consensus 77 ~~~~~~~~~~~~~~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v~~~--~~g~~d~~~l~~~i~---~~t~lv~~~~~~n 151 (382)
T TIGR03403 77 LKGVYFDEILKGGKNHIITTEVEHPAVRATCAFLESLGVEVTYLPIN--EQGTITAEQVREAIT---EKTALVSVMWANN 151 (382)
T ss_pred HHHHHHhhcccCCCCEEEEcCCccHHHHHHHHHHHHCCCEEEEEecC--CCCCCCHHHHHHhcc---cCCeEEEEEcccC
Confidence 332211 145 468999986665544 4456789999999984 346789999999887 5678999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEec
Q 012238 241 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC 320 (467)
Q Consensus 241 PTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~ 320 (467)
|||.+++.+ +|.++|+++|+++++|+++. +..-.. + +.+.+. .+++.|++|.+|++|+ |++++
T Consensus 152 ~tG~~~~~~---~I~~la~~~g~~~ivD~a~~-~g~~~~--~------~~~~~~-D~~~~s~~K~~gp~G~--g~l~v-- 214 (382)
T TIGR03403 152 ETGMIFPIK---EIGEICKERGVLFHTDAVQA-IGKIPV--D------VQKAGV-DFLSFSAHKFHGPKGV--GGLYI-- 214 (382)
T ss_pred CCccccCHH---HHHHHHHHcCCEEEEechhh-cCCCcc--C------ccccCC-CEEEEcchhhCCCCce--EEEEE--
Confidence 999999966 67777999999999999954 221111 1 111222 3788999999998884 77752
Q ss_pred CCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 012238 321 SSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK 400 (467)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g 400 (467)
.+...... . +.. ...........++..++.++..++.. . .+.++...+++++.++++.+.|+ +++
T Consensus 215 r~~~~~~p----~---~~g-~~~~~~~~~gt~~~~~~~al~~al~~---~---~~~~~~~~~~~~~l~~~l~~~L~-~~~ 279 (382)
T TIGR03403 215 RKGVELTP----L---FHG-GEHMGGRRSGTLNVPYIVAMGEAMRL---A---NEYLDFEKSHVRRLRDRLEDALL-ELP 279 (382)
T ss_pred CCCCCCCC----c---ccC-CCCCCCcccCCcChHHHHHHHHHHHH---H---HHhHHHHHHHHHHHHHHHHHHHh-cCC
Confidence 22110000 0 000 00000011223444455455544421 1 23366778889999999999998 653
Q ss_pred CCCCcccccCC----cce--EEecCCCHHHHHHHHHcccEEEeCC-------------------------C--eEEeccC
Q 012238 401 SGKDWSFILRQ----IGM--FSFTGLNKAQSDNMTNKWHVYMTKD-------------------------G--RISLAGL 447 (467)
Q Consensus 401 ~~~~~~~~~~~----~g~--f~~~~l~~~~~~~ll~~~gI~v~~g-------------------------g--Ris~~~~ 447 (467)
++.+..+. .++ |.+.+.+.+.+...|.++||.++.| | |+|+...
T Consensus 280 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~v~~~~g~~~~~~~~~iR~s~~~~ 356 (382)
T TIGR03403 280 ---DVFVVGDREHRVPNTILISIKGVEGEAMLWDLNKAGIAASTGSACASEDLEANPVMVAIGADKELAHTAIRLSLSRF 356 (382)
T ss_pred ---CEEEECCCCCCcCCEEEEEeCCCCHHHHHHhhccCCEEEEchhccCCCCCCcCHHHHHcCCChHHhCeeEEEECCCC
Confidence 14555432 222 2333456665554466779999842 3 9998765
Q ss_pred -ChhhHHHHHHHHHHHHHhc
Q 012238 448 -SLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 448 -~~~~i~~~~~~l~~~l~~~ 466 (467)
+++++++++++|+++++++
T Consensus 357 ~t~~did~~~~~l~~~~~~~ 376 (382)
T TIGR03403 357 TTEEEIDYTIEVFKKAVQRL 376 (382)
T ss_pred CCHHHHHHHHHHHHHHHHHH
Confidence 6699999999999988764
No 143
>PLN02242 methionine gamma-lyase
Probab=99.93 E-value=1.5e-23 Score=211.01 Aligned_cols=217 Identities=15% Similarity=0.142 Sum_probs=160.1
Q ss_pred CCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHH-----hhCC
Q 012238 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF-----NDAR 198 (467)
Q Consensus 124 ~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~-----~~~G 198 (467)
+..-..+|++.+|++.... .+++ ++||++|+.++ +...+.+||+|+++.|.|+.+...+ +..|
T Consensus 74 ~~Pt~~~LE~~lA~l~g~~--------~~l~--~~sG~~Ai~~a--l~al~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G 141 (418)
T PLN02242 74 FNPTVLNLGRQMAALEGTE--------AAYC--TASGMSAISSV--LLQLCSSGGHVVASNTLYGGTHALLAHFLPRKCN 141 (418)
T ss_pred CChhHHHHHHHHHHHhCCC--------eEEE--EccHHHHHHHH--HHHHhCCCCEEEEcCCcHHHHHHHHHHhhhhccC
Confidence 4566889999999996443 4556 89999999997 5556789999999999998887655 3467
Q ss_pred CCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCC
Q 012238 199 VPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGS 278 (467)
Q Consensus 199 ~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~ 278 (467)
++++.++. .|++.+++.+++ .++++|++++|+||||.+.+ +++|+++|+++|++||+|++|..+.++
T Consensus 142 ~~~~~~d~-------~d~e~l~~~i~~--~~tklV~lesp~NPtG~v~d---l~~I~~la~~~gi~livDea~~~~~~~- 208 (418)
T PLN02242 142 ITTTFVDI-------TDLEAVKKAVVP--GKTKVLYFESISNPTLTVAD---IPELARIAHEKGVTVVVDNTFAPMVLS- 208 (418)
T ss_pred ceEEEcCC-------CCHHHHHHhcCc--CCCEEEEEecCCCCCCcccC---HHHHHHHHHHhCCEEEEECCCCccCCC-
Confidence 77766654 388999998862 25889999999999999875 567888899999999999999766542
Q ss_pred CCCChhHHHHHHhcCCeEEEEecCccCcccCCCcc-ceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccC--ccCCCchH
Q 012238 279 LDNDASSVRLFATRGMELLVAQSYSKNLGLYAERI-GAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARP--MYSNPPVH 355 (467)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~Ri-G~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~ 355 (467)
. . .. ...++++||||.++.+|+++ ||++ +++++++. +...... ...+++..
T Consensus 209 ----~--~----~~-g~divv~S~SK~l~g~g~~~gG~iv---~~~~li~~------------l~~~~~~~~~~~g~~~~ 262 (418)
T PLN02242 209 ----P--A----RL-GADVVVHSISKFISGGADIIAGAVC---GPAELVNS------------MMDLHHGALMLLGPTMN 262 (418)
T ss_pred ----H--H----Hc-CCcEEEEeCccccCCCCCceEEEEE---cCHHHHHH------------HHHHhhhhhhccCCCCC
Confidence 1 1 11 24688999999999999985 7774 78888777 4433221 22334444
Q ss_pred HHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 012238 356 GARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK 400 (467)
Q Consensus 356 ~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g 400 (467)
.|.++..++... .+..+.+++.++++.+.+.|+ +.+
T Consensus 263 ~~~A~l~~~~l~--------tl~~r~~~~~~~a~~la~~L~-~~~ 298 (418)
T PLN02242 263 PKVAFELSERLP--------HLSLRMKEHCRRAMEYAKRMK-ELG 298 (418)
T ss_pred HHHHHHHHcCCC--------cHHHHHHHHHHHHHHHHHHHH-hCC
Confidence 555555554432 134466788899999999998 765
No 144
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.93 E-value=6.3e-23 Score=204.44 Aligned_cols=307 Identities=13% Similarity=0.019 Sum_probs=198.3
Q ss_pred chHHHHHHHHHHHhcCCC-------CcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHh
Q 012238 102 VLDVVKKAENLMLERGEN-------KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY 174 (467)
Q Consensus 102 ~~~~v~~a~~~~~~~~~~-------~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~ 174 (467)
..+.+.+++.+....... ..+....-..+++++++++++. +++++ ++|+++++.++ +...+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~--------~~i~~--~~g~t~al~~~--l~~~~ 80 (361)
T cd06452 13 LTPEARKALIEWGDGYSVCDFCRGRLDEIEKPPIKDFHHDLAEFLGM--------DEARV--TPGAREGKFAV--MHSLC 80 (361)
T ss_pred CCHHHHHHHHHHhcccCCccccccccccccCchHHHHHHHHHHHcCC--------ceEEE--eCCHHHHHHHH--HHHhc
Confidence 367888888877632100 1111123467899999999532 47888 99999999987 44456
Q ss_pred CCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCC----CCcEEEEeCCCCCCCCCCCCHHH
Q 012238 175 FPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP----GGSFILLHGCAHNPTGIDPTPEQ 250 (467)
Q Consensus 175 ~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~----~~~~~i~i~~p~NPTG~~~~~~~ 250 (467)
.+||+|+++.++|......++..|++++.++.+.+.++.+|++.+++.+++.. .+++++++++|+||||...+
T Consensus 81 ~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~--- 157 (361)
T cd06452 81 EKGDWVVVDGLAHYTSYVAAERAGLNVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHD--- 157 (361)
T ss_pred CCCCEEEEcCCcchHHHHHHHhcCCEEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeecc---
Confidence 79999999999887766778899999999998544456899999999886421 36789999999999998655
Q ss_pred HHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecCCHHHHhhhh
Q 012238 251 WEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARCC 330 (467)
Q Consensus 251 l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~ 330 (467)
+++|+++|+++|+++|+|++|..... +.+. ......++++|+||.++ ++.|+||++ .+++++++
T Consensus 158 ~~~i~~~~~~~~~~vivD~a~~~g~~---~~~~-------~~~~~d~~~~s~~K~l~-~~~~~G~l~---~~~~~~~~-- 221 (361)
T cd06452 158 AKKIAKVCHEYGVPLLLNGAYTVGRM---PVSG-------KELGADFIVGSGHKSMA-ASAPIGVLA---TTEEWADI-- 221 (361)
T ss_pred HHHHHHHHHHcCCeEEEECCcccCCc---CCCH-------HHcCCCEEEecCCcccc-CCCCeEEEE---ECHHHHHH--
Confidence 56788889999999999999863221 1111 11134689999999998 556999995 66777776
Q ss_pred hhhHHHHHHHHHhhccCcc--------CCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-CC
Q 012238 331 EVAVIQVKSQLKRLARPMY--------SNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD-KS 401 (467)
Q Consensus 331 ~~~~~~~~~~l~~~~~~~~--------~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~-g~ 401 (467)
+.+...++. .......+..+...+. . +.+.++... +..++++++.+.|+ ++ |
T Consensus 222 ----------l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~---~---~~~~~~~~~-~~~~~~~~l~~~L~-~l~g- 282 (361)
T cd06452 222 ----------VFRTSQMFKIKEVELLGCTLRGAPLVTLMASFP---H---VKERVKRWD-EEVEKARWFVAELE-KIEG- 282 (361)
T ss_pred ----------HhccccccccceeeeeccccCchHHHHHHHHHH---H---HHHHHHHHH-HHHHHHHHHHHHHh-cCCC-
Confidence 443332210 1111111112222221 0 111122222 22344578888888 76 5
Q ss_pred CCCcccc---cCCcceEEecCCC-------------HHHHHHHHHcccEEEeCCC-----eEEeccCChhhHHHHHHHHH
Q 012238 402 GKDWSFI---LRQIGMFSFTGLN-------------KAQSDNMTNKWHVYMTKDG-----RISLAGLSLAKCEYLADAII 460 (467)
Q Consensus 402 ~~~~~~~---~~~~g~f~~~~l~-------------~~~~~~ll~~~gI~v~~gg-----Ris~~~~~~~~i~~~~~~l~ 460 (467)
+++. ....+ |+.+... .++.++|++ +||.+...| |++....++++++.++++|+
T Consensus 283 ---~~v~~~~~~~~n-~~~~~~~~~~~~~~~~~~~~~~~~~~L~~-~gI~~~~~~~~~~~ri~~~g~~~e~~~~l~~al~ 357 (361)
T cd06452 283 ---IKQLGEKPKNHD-LMFFETPSFDEIAKKHKRRGYFLYSELKK-RGIHGIKPGLTRYFKLSTYGLTWEQVEYVVDAFK 357 (361)
T ss_pred ---eEEECCCCCCCc-eEEEEcCCcchhhhhccccchhHHHHHHH-cCceEEcCCCceEEEEEecCCCHHHHHHHHHHHH
Confidence 4443 22233 2222111 135566655 599975443 88874448899999999998
Q ss_pred HHH
Q 012238 461 DSY 463 (467)
Q Consensus 461 ~~l 463 (467)
++.
T Consensus 358 ~~~ 360 (361)
T cd06452 358 EIA 360 (361)
T ss_pred HHh
Confidence 764
No 145
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.93 E-value=7e-23 Score=204.73 Aligned_cols=323 Identities=15% Similarity=0.080 Sum_probs=204.5
Q ss_pred chHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEE
Q 012238 102 VLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVL 181 (467)
Q Consensus 102 ~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vl 181 (467)
+++.+++++.... ......|. .-..++|+.++++++... .++.|++ +.+|++++..+ +.....+||+|+
T Consensus 16 ~~~~~~~a~~~~~-~~~~~~~~--~~~~~~~~~l~~l~~~~~----~~~~i~~--~~~gt~~l~~~--~~~l~~~~~~vl 84 (368)
T PRK13479 16 TSRTVREAMLRDW-GSWDDDFN--ALTASVRAKLVAIATGEE----GYTCVPL--QGSGTFSVEAA--IGSLVPRDGKVL 84 (368)
T ss_pred CCHHHHHHhCCCC-CCCChHHH--HHHHHHHHHHHHHhCCCC----CceEEEE--cCCcHHHHHHH--HHhccCCCCeEE
Confidence 4778887775543 21112232 357889999999976431 0245667 89999999998 455567999999
Q ss_pred EcCCCCcch--HHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHH
Q 012238 182 ISSPTWGNH--KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQ 259 (467)
Q Consensus 182 v~~P~y~~~--~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~ 259 (467)
++.++|... ...++..|++++.++.. .++.+|++.+++.+++. ++.+++++++++||||...+.+ +|+++|+
T Consensus 85 v~~~~~~~~~~~~~~~~~g~~~~~i~~~--~~~~~d~~~l~~~l~~~-~~~~~v~~~~~~~~tG~~~~~~---~i~~l~~ 158 (368)
T PRK13479 85 VPDNGAYGARIAQIAEYLGIAHVVLDTG--EDEPPDAAEVEAALAAD-PRITHVALVHCETTTGILNPLD---EIAAVAK 158 (368)
T ss_pred EEeCCchHHHHHHHHHHcCCcEEEEECC--CCCCCCHHHHHHHHHhC-CCCcEEEEEcccCccccccCHH---HHHHHHH
Confidence 998888665 47788899999999983 34679999999998743 3556788899999999999865 6677799
Q ss_pred hcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccC-cccCCCccceEEEecCCHHHHhhhhhhh---HH
Q 012238 260 EKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKN-LGLYAERIGAMNVVCSSSDLAARCCEVA---VI 335 (467)
Q Consensus 260 ~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~~~~G~RiG~~~~v~~~~~~~~~~~~~~---~~ 335 (467)
++|+++|+| +|+.+.... + .+.+.+.+ +++.|++|. +|++| +||++ .+++.++...... +.
T Consensus 159 ~~~~~livD-a~~~~g~~~-------~-~~~~~~~d-~~v~s~~K~l~g~~G--~G~l~---~~~~~~~~~~~~~~~~~~ 223 (368)
T PRK13479 159 RHGKRLIVD-AMSSFGAIP-------I-DIAELGID-ALISSANKCIEGVPG--FGFVI---ARRSELEACKGNSRSLSL 223 (368)
T ss_pred HcCCEEEEE-cccccCCcc-------c-cccccCce-EEEecCccccccCCC--ceEEE---ECHHHHHHhhcCCCCeee
Confidence 999999999 545554321 1 11122223 566788885 47788 59996 6666666500000 00
Q ss_pred HHHHHHHhhc--cCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCC--
Q 012238 336 QVKSQLKRLA--RPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQ-- 411 (467)
Q Consensus 336 ~~~~~l~~~~--~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~~-- 411 (467)
.+........ ......++.....++..++.. +.+ ...+++..++++++++.+.+.|+ ++|+ +...+.
T Consensus 224 ~~~~~~~~~~~~~~~~~t~~~~~~~~l~~al~~--l~~--~~~~~~~~~~~~~~~~~l~~~L~-~~g~----~~~~~~~~ 294 (368)
T PRK13479 224 DLYDQWAYMEKTGQWRFTPPTHVVAAFYQALLE--LEE--EGGVPARGARYANNQRTLVAGMR-ALGF----EPLLDAEI 294 (368)
T ss_pred cHHHHHhhhcccCCCCCCCcHHHHHHHHHHHHH--HHH--hhCHHHHHHHHHHHHHHHHHHHH-HcCC----cccCCchh
Confidence 0000000000 011113343333333333321 100 11245677889999999999998 8774 333221
Q ss_pred ---cceEEecC----CCHHH-HHHHHHcccEEEeCCC-------eEEe-ccCChhhHHHHHHHHHHHHHhc
Q 012238 412 ---IGMFSFTG----LNKAQ-SDNMTNKWHVYMTKDG-------RISL-AGLSLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 412 ---~g~f~~~~----l~~~~-~~~ll~~~gI~v~~gg-------Ris~-~~~~~~~i~~~~~~l~~~l~~~ 466 (467)
+...++.. .+.+. .+++. ++||.+.+|. ||+. +..+++++++++++|+++++++
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~l~~~L~-~~gi~v~~g~~~~~~~iRis~~~~~t~edi~~~l~~L~~~l~~~ 364 (368)
T PRK13479 295 QSPIIVTFHAPADPAYDFKEFYERLK-EQGFVIYPGKLTQVDTFRIGCIGDVDAADIRRLVAAIAEALYWM 364 (368)
T ss_pred cCceEEEEECCCCCCcCHHHHHHHHH-HCCEEEecCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHHHc
Confidence 11223322 23344 45554 4699998862 9984 6557899999999999998865
No 146
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.93 E-value=5.3e-23 Score=209.23 Aligned_cols=338 Identities=15% Similarity=0.087 Sum_probs=221.2
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCch
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (467)
+.+.+|+..|..-..-|. .+|.|.+++.+.++... ..+.+..+..+|++++++++.. .+++++ ++||+
T Consensus 47 G~~ylD~~~g~~~~~lGh--~~p~v~~ai~~q~~~~~-~~~~~~~~~~~lae~l~~~~~~-------~~~v~~--~~sGs 114 (423)
T TIGR00713 47 GNEYIDYVLSWGPLILGH--AHPRVVEAVKEALERGT-SYGAPTEAEILLAKEIISRVPS-------VEMVRF--VNSGT 114 (423)
T ss_pred CCEEEEccccccccccCC--CCHHHHHHHHHHHHhCC-cCCCCCHHHHHHHHHHHHhCCc-------ccEEEE--eCCHH
Confidence 458999998875222233 37889999988886643 2233677899999999998533 257888 99999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhh---CCCCeEEeeeecC--C-----CC---CCChhhHHHHHHcCCC
Q 012238 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFND---ARVPWSEYRYYDP--K-----TV---GLDFEGMIADIKAAPG 228 (467)
Q Consensus 162 ~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~---~G~~~~~v~~~~~--~-----~~---~~d~~~l~~~l~~~~~ 228 (467)
+|++.+.++.......++|+...|+|..+...+.. .|......+..+. . .. ..|++.+++.+++.+.
T Consensus 115 eA~e~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~ 194 (423)
T TIGR00713 115 EATMSAVRLARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPYNDLEALEEVFEEYGE 194 (423)
T ss_pred HHHHHHHHHHHHhhCCCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCcccccceEEeCCCCHHHHHHHHHHcCC
Confidence 99999866544455668999999999987543322 1111111111000 0 00 1278999998875434
Q ss_pred CcEEEEe-CCCCCCCCCCCC-HHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCc
Q 012238 229 GSFILLH-GCAHNPTGIDPT-PEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL 306 (467)
Q Consensus 229 ~~~~i~i-~~p~NPTG~~~~-~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~ 306 (467)
++.++++ +.++| +|.+++ .+.+++|.++|++||+++|+||+|.++.++. . ... ......++ +.+|||.+
T Consensus 195 ~~aavi~ep~~~~-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~r~g~---~-~~~-~~~~~~pD---i~t~sK~l 265 (423)
T TIGR00713 195 EIAGVIVEPVAGN-MGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRVAL---G-GAQ-EYFGVEPD---LTTLGKII 265 (423)
T ss_pred cEEEEEEeCCCCC-CCCcCCCHHHHHHHHHHHHHhCCEEEEEccccccccCc---c-hhH-HHhCCCcc---hhhhhhhh
Confidence 5455555 68888 798887 6889999999999999999999999886542 1 111 11222233 23799999
Q ss_pred ccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHh---hccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHH
Q 012238 307 GLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKR---LARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGR 383 (467)
Q Consensus 307 ~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~ 383 (467)
+ +|+|+||++ +++++++. +.. .....+.+.+.+++.++..+|+.. .+ ...++..++.
T Consensus 266 ~-~G~pig~v~---~~~~i~~~------------~~~~~~~~~~~T~~~~~~~~aaa~a~l~~~--~~--~~~~~~~~~~ 325 (423)
T TIGR00713 266 G-GGLPVGAFG---GRREIMER------------LAPEGPVYQAGTLSGNPLAMAAGLATLKLL--DE--EGVYTELDEL 325 (423)
T ss_pred c-CCCceeeee---EHHHHHHh------------hCcCCCeeeccCCCCCHHHHHHHHHHHHHH--hc--ccHHHHHHHH
Confidence 9 999999995 77777776 432 112234456777777776666421 00 0124455666
Q ss_pred HHHHHHHHHHHhhhccCCCCCcccccCCcceE-EecCC------------CH----HHHHHHHHcccEEEeCCC----eE
Q 012238 384 IKNVRQKLFDSLSAKDKSGKDWSFILRQIGMF-SFTGL------------NK----AQSDNMTNKWHVYMTKDG----RI 442 (467)
Q Consensus 384 ~~~~r~~l~~~l~~~~g~~~~~~~~~~~~g~f-~~~~l------------~~----~~~~~ll~~~gI~v~~gg----Ri 442 (467)
.+..++.+.+.++ +.+++. . ....|+++ +++.. +. .+...+++ +||++.+++ ||
T Consensus 326 ~~~~~~~l~~~~~-~~~~~~--~-v~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~~~~~~l 400 (423)
T TIGR00713 326 AKRLAEGLSEVLE-DTGIPH--T-VNRVGSMFSLFFTEEEVTNYADAKKSDTELFAKFFHEMLD-KGVFLPPSQFEACFL 400 (423)
T ss_pred HHHHHHHHHHHHH-hcCCCe--E-EEeeccEEEEEEecCCCCChhhhhcccHHHHHHHHHHHHH-CCeEEecCCccceee
Confidence 6666777777777 666421 1 23445555 33421 11 23446665 699987754 88
Q ss_pred EeccCChhhHHHHHHHHHHHHHhc
Q 012238 443 SLAGLSLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 443 s~~~~~~~~i~~~~~~l~~~l~~~ 466 (467)
++.. +++++++++++|.++++++
T Consensus 401 ~~~~-t~~~i~~~~~~l~~~l~~~ 423 (423)
T TIGR00713 401 SAAH-TEEDIENTIEAAEEVFAEL 423 (423)
T ss_pred ECCC-CHHHHHHHHHHHHHHHhhC
Confidence 8774 8999999999999998764
No 147
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.92 E-value=9.1e-23 Score=203.00 Aligned_cols=313 Identities=14% Similarity=0.113 Sum_probs=203.1
Q ss_pred CCchHHHHHHHHHHHhcCCCCcCCCCcc--hHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCC
Q 012238 100 PYVLDVVKKAENLMLERGENKEYLPIEG--LAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPG 177 (467)
Q Consensus 100 p~~~~~v~~a~~~~~~~~~~~~Y~~~~G--~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~g 177 (467)
+.+++.+.+++.+... ...| +... ..++++.+++++.... ++.+++ +.||++++.++ +...+.+|
T Consensus 8 ~~~~~~v~~a~~~~~~---~~~~-~~~~~~~~~~~~~la~~~g~~~-----~~~~~~--~~~~t~al~~~--~~~~~~~g 74 (356)
T cd06451 8 SNVPPRVLKAMNRPML---GHRS-PEFLALMDEILEGLRYVFQTEN-----GLTFLL--SGSGTGAMEAA--LSNLLEPG 74 (356)
T ss_pred cCCCHHHHHHhCCCcc---CCCC-HHHHHHHHHHHHHHHHHhcCCC-----CCEEEE--ecCcHHHHHHH--HHHhCCCC
Confidence 3447888888865432 1223 2222 5688888888875421 344666 88899999987 44456799
Q ss_pred CEEEEcCCCCcc--hHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHH
Q 012238 178 AKVLISSPTWGN--HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIA 255 (467)
Q Consensus 178 d~Vlv~~P~y~~--~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~ 255 (467)
|+|+++.++|.. +...++..|++++.++.++ ++.+|++.+++.+++ .+++++++++++||||.+++.+ +|.
T Consensus 75 ~~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~l~~~i~~--~~~~~v~i~~~~~~~G~~~~~~---~i~ 147 (356)
T cd06451 75 DKVLVGVNGVFGDRWADMAERYGADVDVVEKPW--GEAVSPEEIAEALEQ--HDIKAVTLTHNETSTGVLNPLE---GIG 147 (356)
T ss_pred CEEEEecCCchhHHHHHHHHHhCCCeEEeecCC--CCCCCHHHHHHHHhc--cCCCEEEEeccCCCcccccCHH---HHH
Confidence 999999987764 5677888999999999842 467999999999973 3677888899999999998865 567
Q ss_pred HHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecCCHHHHhhhhhhhHH
Q 012238 256 DVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVI 335 (467)
Q Consensus 256 ~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~ 335 (467)
++|+++|+++++|++|. +.. ...+ + ...+. .+++.|.+|.++.| .++||++ .++++++.
T Consensus 148 ~~a~~~~~~li~D~~~~-~g~--~~~~---~---~~~~~-d~~~~s~~K~l~~p-~g~G~l~---~~~~~~~~------- 206 (356)
T cd06451 148 ALAKKHDALLIVDAVSS-LGG--EPFR---M---DEWGV-DVAYTGSQKALGAP-PGLGPIA---FSERALER------- 206 (356)
T ss_pred HHHHhcCCEEEEeeehh-ccC--cccc---c---cccCc-cEEEecCchhccCC-CCcceeE---ECHHHHHH-------
Confidence 77999999999999854 221 1111 1 11222 35577899999854 3589996 56677665
Q ss_pred HHHH-------------HHHhhc-cCccCC-CchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 012238 336 QVKS-------------QLKRLA-RPMYSN-PPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK 400 (467)
Q Consensus 336 ~~~~-------------~l~~~~-~~~~~~-~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g 400 (467)
+.. ...... .....+ ++...+.++..++.. +. ...+++..++.+++++++.+.|+ ..|
T Consensus 207 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~aal~~--l~---~~~~~~~~~~~~~~~~~l~~~L~-~~g 279 (356)
T cd06451 207 -IKKKTKPKGFYFDLLLLLKYWGEGYSYPHTPPVNLLYALREALDL--IL---EEGLENRWARHRRLAKALREGLE-ALG 279 (356)
T ss_pred -HHhcCCCCceeecHHHHHhhhcccCCCCCCChHHHHHHHHHHHHH--HH---HhhHHHHHHHHHHHHHHHHHHHH-HcC
Confidence 211 000000 001222 233223333333321 11 12356677888888999999998 776
Q ss_pred CCCCcccccC---CcceEEecC----CCH-HHHHHHHHcccEEEeCC------C--eEEeccC-ChhhHHHHHHHHHHHH
Q 012238 401 SGKDWSFILR---QIGMFSFTG----LNK-AQSDNMTNKWHVYMTKD------G--RISLAGL-SLAKCEYLADAIIDSY 463 (467)
Q Consensus 401 ~~~~~~~~~~---~~g~f~~~~----l~~-~~~~~ll~~~gI~v~~g------g--Ris~~~~-~~~~i~~~~~~l~~~l 463 (467)
+ ....+ .++.++|+. .+. ++++.+.+++||.+.+| + |+|++.. +++++++++++|++++
T Consensus 280 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~gI~~~~g~~~~~~~~iRis~~~~~~~e~v~~~~~~l~~~~ 355 (356)
T cd06451 280 L----KLLAKPELRSPTVTAVLVPEGVDGDEVVRRLMKRYNIEIAGGLGPTAGKVFRIGHMGEATREDVLGVLSALEEAL 355 (356)
T ss_pred C----eeccCcccCCCceEEEECCCCCCHHHHHHHHHHhCCEEEecccccccCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 3 44322 133344442 233 44556555459999875 2 9998643 6799999999999876
Q ss_pred H
Q 012238 464 H 464 (467)
Q Consensus 464 ~ 464 (467)
+
T Consensus 356 ~ 356 (356)
T cd06451 356 K 356 (356)
T ss_pred C
Confidence 4
No 148
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.92 E-value=6.7e-23 Score=207.04 Aligned_cols=322 Identities=16% Similarity=0.146 Sum_probs=204.2
Q ss_pred cEEecCcccCCCCCCCCchHHHHHHHHHHHhcC---CCCcCCCCcc----hHHHHHHHHHHHhCCCCcccccCceeeeec
Q 012238 85 KLNLGVGAYRTEELQPYVLDVVKKAENLMLERG---ENKEYLPIEG----LAAFNKVTAELLFGADNSVLKEQRVATVQG 157 (467)
Q Consensus 85 ~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~---~~~~Y~~~~G----~~~lr~aia~~l~~~~~~~~~~~~i~~~~t 157 (467)
.+.|..+ +..++++.+++++.+.+... ....|....+ ..++|+.++++++.. +++|++ +
T Consensus 18 ~~yl~~~------~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~~~------~~~v~~--~ 83 (397)
T TIGR01976 18 RVFFDNP------AGTQIPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLLNAD------PPEVVF--G 83 (397)
T ss_pred eEEecCC------ccCCCCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcCCC------CCeEEE--e
Confidence 4556544 33445888999988876431 1123533333 468999999986543 446888 8
Q ss_pred CCchhHHHHHHHHHH-HhCCCCEEEEcCCCCcch----HHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEE
Q 012238 158 LSGTGSLRLAAALIE-RYFPGAKVLISSPTWGNH----KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFI 232 (467)
Q Consensus 158 ~ggt~al~l~~~~l~-~~~~gd~Vlv~~P~y~~~----~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~ 232 (467)
.|+++++.++...+. .+.|||+|+++.|.|... ...++..|++++.++.+ ++++.+|++.+++.++ +++++
T Consensus 84 ~~~t~~l~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~l~~~i~---~~~~l 159 (397)
T TIGR01976 84 ANATSLTFLLSRAISRRWGPGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVD-EATGELHPDDLASLLS---PRTRL 159 (397)
T ss_pred CCHHHHHHHHHHHHHhcCCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEecc-ccCCCcCHHHHHHhcC---CCceE
Confidence 999999887633332 256999999999988653 34567789999999884 3346799999999987 57889
Q ss_pred EEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCc
Q 012238 233 LLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAER 312 (467)
Q Consensus 233 i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R 312 (467)
+++++|+||||.+.+ +++|+++|+++|+++++|+++. ..... .+ +.+.+ ..+++.|++|.+| .|
T Consensus 160 v~i~~~~n~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~-~~~~~--~~------~~~~~-~d~~~~s~~K~~g---~~ 223 (397)
T TIGR01976 160 VAVTAASNTLGSIVD---LAAITELVHAAGALVVVDAVHY-APHGL--ID------VQATG-ADFLTCSAYKFFG---PH 223 (397)
T ss_pred EEEeCCCCCCCccCC---HHHHHHHHHHcCCEEEEehhhh-ccccC--CC------HHHcC-CCEEEEechhhcC---Cc
Confidence 999999999999987 4577777999999999999953 21111 11 11222 3455689999875 46
Q ss_pred cceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCc---------c-CCCchHH---HHHHHHHhCChh------hHHHH
Q 012238 313 IGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPM---------Y-SNPPVHG---ARIVANVVGNPA------LFDEW 373 (467)
Q Consensus 313 iG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---------~-~~~~~~~---~~~~~~~L~~~~------~~~~~ 373 (467)
+|+++ .++++++. +....... . ..++... ...+...+.+.. ..+..
T Consensus 224 ~G~l~---~~~~~~~~------------l~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~ 288 (397)
T TIGR01976 224 MGILW---GRPELLMN------------LPPYKLTFSYDTGPERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERL 288 (397)
T ss_pred eEEEE---EcHHHHhh------------CCCccccCccCCCcchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhh
Confidence 89985 56666665 32211110 0 1122111 222222222111 01111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccC-----CcceEEec--CCCHHHHHHHHHcccEEEeCC-------
Q 012238 374 KAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR-----QIGMFSFT--GLNKAQSDNMTNKWHVYMTKD------- 439 (467)
Q Consensus 374 ~~~l~~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~-----~~g~f~~~--~l~~~~~~~ll~~~gI~v~~g------- 439 (467)
.+.+++.+++..+.++++.+.|+ +++. +++..+ .++++.+. +.+.+.+.+.|+++||.+..|
T Consensus 289 ~~~~~~~~~~~~~l~~~l~~~L~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~ 364 (397)
T TIGR01976 289 VASFQAIDAYENRLAEYLLVGLS-DLPG---VTLYGVARLAARVPTVSFTVHGLPPQRVVRRLADQGIDAWAGHFYAVRL 364 (397)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHh-cCCC---EEEeCCCCccCCCceEEEEeCCcCHHHHHHHHHHCCeEEEeCccchHHH
Confidence 12256777888888999999998 7641 444433 44544322 334444444445579999754
Q ss_pred ----------C--eEEeccC-ChhhHHHHHHHH
Q 012238 440 ----------G--RISLAGL-SLAKCEYLADAI 459 (467)
Q Consensus 440 ----------g--Ris~~~~-~~~~i~~~~~~l 459 (467)
+ |||+... +++++++++++|
T Consensus 365 ~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l 397 (397)
T TIGR01976 365 LRRLGLNDEGGVVRVGLAHYNTAEEVDRLLEAL 397 (397)
T ss_pred HHHhCCCCCCCeEEEEeeccCCHHHHHHHHHhC
Confidence 2 9998543 668899988764
No 149
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.92 E-value=1.8e-22 Score=200.72 Aligned_cols=312 Identities=17% Similarity=0.123 Sum_probs=204.2
Q ss_pred chHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEE
Q 012238 102 VLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVL 181 (467)
Q Consensus 102 ~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vl 181 (467)
+++.+++++...... ....|. .-..++|+.++++++... +...|++ +.||++++..+ +...+.+||+|+
T Consensus 10 ~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~la~~~~~~~----~~~~i~~--~~~gt~~l~~~--~~~~~~~~~~vi 78 (355)
T TIGR03301 10 TSATVRDAMLVDWCH-WDSEFN--DVTDQVRDRLLALAGGDD----NHTCVLL--QGSGTFAVEAT--IGSLVPRDGKLL 78 (355)
T ss_pred CCHHHHHHhhhhccC-CCHHHH--HHHHHHHHHHHHHhcCCC----CCcEEEE--eCCcHHHHHHH--HHhccCCCCeEE
Confidence 478888888773221 112342 447789999999976541 1125666 89999999997 444556788877
Q ss_pred EcCCCC-cc-hHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHH
Q 012238 182 ISSPTW-GN-HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQ 259 (467)
Q Consensus 182 v~~P~y-~~-~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~ 259 (467)
+..+.+ +. +...++..|.+++.++. +.++.+|++.+++.+++. ++.+++++++++||||...+ +++|+++|+
T Consensus 79 ~~~~~~~~~~~~~~a~~~g~~~~~i~~--~~~~~~d~~~l~~~l~~~-~~~~~v~~~~~~~~~G~~~~---~~~i~~l~~ 152 (355)
T TIGR03301 79 VLINGAYGERLAKICEYLGIPHTDLNF--SEYEPPDLNRIEEALAAD-PDITHVATVHHETTTGILNP---LEAIAKVAR 152 (355)
T ss_pred EECCCchhhHHHHHHHHcCCceEEEec--CCCCCCCHHHHHHHHHhC-CCceEEEEEecCCcccchhH---HHHHHHHHH
Confidence 666554 43 56677889999999987 345679999999999753 35567778899999999877 468888899
Q ss_pred hcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCc-ccCCCccceEEEecCCHHHHhhhhhhhHHHHH
Q 012238 260 EKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL-GLYAERIGAMNVVCSSSDLAARCCEVAVIQVK 338 (467)
Q Consensus 260 ~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~ 338 (467)
+||+++|+|+++. +.. .+. .+ ...+..+++.|++|.+ |++| +||++ .+++.++. +.
T Consensus 153 ~~~~~livD~~~s-~g~--~~~---~~----~~~~~d~~~~s~~K~l~~~~G--~g~~~---~~~~~~~~--------~~ 209 (355)
T TIGR03301 153 SHGAVLIVDAMSS-FGA--IPI---DI----EELDVDALIASANKCLEGVPG--FGFVI---ARRDLLEA--------SA 209 (355)
T ss_pred HcCCEEEEEeccc-cCC--ccc---ch----hhcCccEEEecCCcccccCCc--eeEEE---ECHHHHHH--------hh
Confidence 9999999998643 321 111 11 1123457799999976 6666 69996 66777766 22
Q ss_pred H-----------HHHhhc--cCccCCCchHHHHHHHHHhCChhhHHHHHHH-HHHHHHHHHHHHHHHHHHhhhccCCCCC
Q 012238 339 S-----------QLKRLA--RPMYSNPPVHGARIVANVVGNPALFDEWKAE-MEMMAGRIKNVRQKLFDSLSAKDKSGKD 404 (467)
Q Consensus 339 ~-----------~l~~~~--~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~-l~~~~~~~~~~r~~l~~~l~~~~g~~~~ 404 (467)
. .+.... ......++...+.++..++.. +. ++. +++..++++++++++.+.|+ ++|
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~--~~---~~g~~~~~~~~~~~~~~~~~~~L~-~~g---- 279 (355)
T TIGR03301 210 GNARSLYLDLYDQWAYMEKTGKWRFTPPTHTVYAFAQALEE--LE---AEGGVPARIARYRRNRELLVDGLR-ALG---- 279 (355)
T ss_pred CCCCCceeeHHHHHHHhhhcCCCCCCCcHHHHHHHHHHHHH--HH---HcccHHHHHHHHHHHHHHHHHHHH-HcC----
Confidence 0 000000 111123454454444444421 10 111 56677888999999999998 776
Q ss_pred cccccC---CcceEEecCC------CHHHHHHHHHcccEEEeCCC-------eEEe-ccCChhhHHHHHHHHHHHH
Q 012238 405 WSFILR---QIGMFSFTGL------NKAQSDNMTNKWHVYMTKDG-------RISL-AGLSLAKCEYLADAIIDSY 463 (467)
Q Consensus 405 ~~~~~~---~~g~f~~~~l------~~~~~~~ll~~~gI~v~~gg-------Ris~-~~~~~~~i~~~~~~l~~~l 463 (467)
++...+ .+++++|+.+ +.+.+.+.+.++||.+.+++ ||++ ...+++++++++++|++++
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~i~~~~~~~~~~iRis~~~~~~~~~i~~~~~~l~~~~ 355 (355)
T TIGR03301 280 FQPLLPERWQSPIIVSFLYPDDPDFDFDDFYQELKERGFVIYPGKLTLADTFRIGTIGEIDAADIERLLEAIKDAL 355 (355)
T ss_pred CeeecCCCCCCCcEEEEECCCCCcchHHHHHHHHHHCCEEEECCccccccEEEEecCCCCCHHHHHHHHHHHHhhC
Confidence 343322 2444555433 22344444555699998873 9986 4457899999999998764
No 150
>PRK07179 hypothetical protein; Provisional
Probab=99.92 E-value=5e-22 Score=201.13 Aligned_cols=323 Identities=15% Similarity=0.103 Sum_probs=211.0
Q ss_pred CCCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhc---CC--CCcCC-CCcchHHHHHHHHHHHhCCCCcccccCceee
Q 012238 81 TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER---GE--NKEYL-PIEGLAAFNKVTAELLFGADNSVLKEQRVAT 154 (467)
Q Consensus 81 ~~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~---~~--~~~Y~-~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~ 154 (467)
.+...+||+.-.|.+-.. .|.+++++.+.+.. +. ...|. ......+|++.+|+++.. +.+++
T Consensus 52 ~g~~~~~~~~~~YL~l~~----~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~--------~~~~~ 119 (407)
T PRK07179 52 PGPDAIILQSNDYLNLSG----HPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKKLAAFTGF--------ESCLL 119 (407)
T ss_pred CCCcEEEeecCCccCCCC----CHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHHHHHHHhCC--------CcEEE
Confidence 445789999888865443 45677777666532 11 11221 223567889999999643 35566
Q ss_pred eecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEE
Q 012238 155 VQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILL 234 (467)
Q Consensus 155 ~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~ 234 (467)
++||++|+.++ +.....+||.|++..+.+......++..|++++.++. .|++.+++.+++ .++.+++
T Consensus 120 --~~sG~~An~~~--l~~l~~~g~~v~~~~~~h~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~--~~~~lV~ 186 (407)
T PRK07179 120 --CQSGWAANVGL--LQTIADPNTPVYIDFFAHMSLWEGVRAAGAQAHPFRH-------NDVDHLRRQIER--HGPGIIV 186 (407)
T ss_pred --ECCHHHHHHHH--HHHhCCCCCEEEEECCcCHHHHHHHHHCCCeEEEecC-------CCHHHHHHHHHh--cCCeEEE
Confidence 89999999887 4444668999999999988887777888887665532 589999999974 2467888
Q ss_pred eCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCe-EEEEecCccCcccCCCcc
Q 012238 235 HGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGME-LLVAQSYSKNLGLYAERI 313 (467)
Q Consensus 235 i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~S~SK~~~~~G~Ri 313 (467)
+++++||||.+.+. ++|.++|+++|+++|+||+|.....+. . ....+..+ ....+ .+++.|+||.++ .|+
T Consensus 187 v~~v~n~tG~i~pl---~~I~~l~~~~~~~livDea~~~g~~g~-~-g~g~~~~~-~~~~~vdi~~~S~sK~~g---~~~ 257 (407)
T PRK07179 187 VDSVYSTTGTIAPL---ADIVDIAEEFGCVLVVDESHSLGTHGP-Q-GAGLVAEL-GLTSRVHFITASLAKAFA---GRA 257 (407)
T ss_pred ECCCCCCCCccccH---HHHHHHHHHcCCEEEEECcccccCcCC-C-CCchHHhc-CCCCCCCEEEeechHhhh---ccC
Confidence 89999999999995 467777999999999999987433331 1 11111111 11122 588999999987 368
Q ss_pred ceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccC-ccCCC-chHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHH
Q 012238 314 GAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARP-MYSNP-PVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKL 391 (467)
Q Consensus 314 G~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~-~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l 391 (467)
||++ +++++++. +.....+ .+.+. +.....++..+++. .+.....+++++++++++
T Consensus 258 G~l~---~~~~~~~~------------~~~~~~~~~~~~t~~~~~~aa~~aal~~-------~~~~~~~~~~l~~~~~~l 315 (407)
T PRK07179 258 GIIT---CPRELAEY------------VPFVSYPAIFSSTLLPHEIAGLEATLEV-------IESADDRRARLHANARFL 315 (407)
T ss_pred eEEE---eCHHHHHH------------HHHhCcCeeeCCCCCHHHHHHHHHHHHH-------HhcCHHHHHHHHHHHHHH
Confidence 9985 67777665 4333222 12222 22221222222221 112345678899999999
Q ss_pred HHHhhhccCCCCCcccccCCcceEEecCC----CHHHHHHHHHcccEEE----eCC-----C--eEEecc-CChhhHHHH
Q 012238 392 FDSLSAKDKSGKDWSFILRQIGMFSFTGL----NKAQSDNMTNKWHVYM----TKD-----G--RISLAG-LSLAKCEYL 455 (467)
Q Consensus 392 ~~~l~~~~g~~~~~~~~~~~~g~f~~~~l----~~~~~~~ll~~~gI~v----~~g-----g--Ris~~~-~~~~~i~~~ 455 (467)
.+.|+ ++| +++. +.+. ++++.+ +.+.+.+.+.++||.+ .|+ + ||+++. .++++++++
T Consensus 316 ~~~L~-~~g----~~v~-~~~~-i~~l~~~~~~~~~~~~~~L~~~GI~~~~~~~p~~~~~~~~lRis~~~~~t~edi~~~ 388 (407)
T PRK07179 316 REGLS-ELG----YNIR-SESQ-IIALETGSERNTEVLRDALEERNVFGAVFCAPATPKNRNLIRLSLNADLTASDLDRV 388 (407)
T ss_pred HHHHH-HcC----CCCC-CCCC-EEEEEeCCHHHHHHHHHHHHHCCceEeeecCCCCCCCCceEEEEECCCCCHHHHHHH
Confidence 99999 776 3444 3444 444322 2244555555679973 332 2 999874 478999999
Q ss_pred HHHHHHHHHhc
Q 012238 456 ADAIIDSYHNV 466 (467)
Q Consensus 456 ~~~l~~~l~~~ 466 (467)
+++|++++++.
T Consensus 389 ~~~l~~~~~~~ 399 (407)
T PRK07179 389 LEVCREARDEV 399 (407)
T ss_pred HHHHHHHHHhh
Confidence 99999998753
No 151
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.92 E-value=6.9e-23 Score=207.01 Aligned_cols=326 Identities=13% Similarity=0.048 Sum_probs=205.9
Q ss_pred CcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCC-----CcchHHHHHHHHHHHhCCCCcccccCceeeeecC
Q 012238 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLP-----IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGL 158 (467)
Q Consensus 84 ~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~-----~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ 158 (467)
.+++|++|.+ ++++ |+.+.++..+. .. ...|.+ ..|.+++++++++++....|.+ .+++++ +.
T Consensus 21 ~~~~l~~g~~----~~~~-p~~~~~~~~~~--~~-~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~~--~~~v~~--~~ 88 (398)
T cd00613 21 SMSFLGSGTY----KHNP-PAVIKRNILEN--EF-YTAYTPYQPEISQGRLQALFELQTMLCELTGMD--VANASL--QD 88 (398)
T ss_pred Cccccccccc----CCcC-cHHHHHHhccc--cC-cccCCCCChhhhhhHHHHHHHHHHHHHHHHCCC--ccceec--cC
Confidence 5699999998 6664 66666655554 22 245665 7899999999999987765543 346666 55
Q ss_pred Cch-hHHHHHHHHHHHhCC--CCEEEEcCCCCcchHHHHhhCC----CCeEEeeeecCCCCCCChhhHHHHHHcCCCCcE
Q 012238 159 SGT-GSLRLAAALIERYFP--GAKVLISSPTWGNHKNIFNDAR----VPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSF 231 (467)
Q Consensus 159 ggt-~al~l~~~~l~~~~~--gd~Vlv~~P~y~~~~~~~~~~G----~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~ 231 (467)
+|+ ++...+ +...+.+ ||+|++++|.|+.+...++..| ++++.+++. .++.+|++.+++.+. ++++
T Consensus 89 ~g~~~~~~~~--~~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~---~~t~ 161 (398)
T cd00613 89 EATAAAEAAG--LAAIRAYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSD--EGGTVDLEALKEEVS---EEVA 161 (398)
T ss_pred chHHHHHHHH--HHHHhcccCCCEEEEcCccCcchHHHHHHhcccCCcEEEEeccC--CCCCcCHHHHHHhcC---CCeE
Confidence 444 443333 2223445 9999999999999988888777 888888873 345789999999886 5688
Q ss_pred EEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccC--
Q 012238 232 ILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY-- 309 (467)
Q Consensus 232 ~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~-- 309 (467)
++++++|+ |||.+. +.+++|+++|+++|+++|+|+++.... ... .. ......+++.|++|.+ +|
T Consensus 162 ~viv~~~~-~~G~~~--~~l~~i~~la~~~g~~livD~~~~~~~-~~~--~~-------~~~~~d~~~~s~~K~~-~p~g 227 (398)
T cd00613 162 ALMVQYPN-TLGVFE--DLIKEIADIAHSAGALVYVDGDNLNLT-GLK--PP-------GEYGADIVVGNLQKTG-VPHG 227 (398)
T ss_pred EEEEECCC-CCceec--chHHHHHHHHHhcCCEEEEEecccccc-CCC--Ch-------HHcCCCEEEeeccccC-CCCC
Confidence 88888885 999984 446899999999999999999854322 111 11 1113568899999998 56
Q ss_pred --CCccceEEEecCCHHHHhhhhhhh-HHHH-------------H---HH--HHhhccCccCCCchHHHHHHHHHhCChh
Q 012238 310 --AERIGAMNVVCSSSDLAARCCEVA-VIQV-------------K---SQ--LKRLARPMYSNPPVHGARIVANVVGNPA 368 (467)
Q Consensus 310 --G~RiG~~~~v~~~~~~~~~~~~~~-~~~~-------------~---~~--l~~~~~~~~~~~~~~~~~~~~~~L~~~~ 368 (467)
|+|+||++ .++++++.- .+. .+.. . .. ........+.+.+...+.++..++...
T Consensus 228 ~Ggp~~g~l~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~~~- 302 (398)
T cd00613 228 GGGPGAGFFA---VKKELVRFL-PGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVYLG- 302 (398)
T ss_pred CCCCceeEEE---EhhhhHhhC-CCCeeccccccCCCcceEEecccchhhcccccccccceecHHHHHHHHHHHHHHhC-
Confidence 79999996 555555540 000 0000 0 00 000001111122222333332222111
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceE--EecCCC-------HHHHHHHHHcccEEEeC-
Q 012238 369 LFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMF--SFTGLN-------KAQSDNMTNKWHVYMTK- 438 (467)
Q Consensus 369 ~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~~~g~f--~~~~l~-------~~~~~~ll~~~gI~v~~- 438 (467)
...+++++++++++++++.+.|+ +++. +. .+.+.++ +++.+. .++++.|++ +||.+..
T Consensus 303 -----~~g~~~~~~~~~~~~~~l~~~L~-~~~~---~~--~~~~~~~~~v~~~~~~~~~~~~~~~~~~L~~-~gi~~~~~ 370 (398)
T cd00613 303 -----PEGLKEIAERAHLNANYLAKRLK-EVGG---VL--PFNGPFFHEFVLRLPPLYGIRAEDLAKALID-GGFHAPTM 370 (398)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHHHH-hcCC---cc--cCCCCeeEEEEEEcCCcchHHHHHHHHhhhh-cCcccccc
Confidence 23366788999999999999998 7753 22 2223322 233222 234555554 5887754
Q ss_pred ---C-C--eEEeccC-ChhhHHHHHHHH
Q 012238 439 ---D-G--RISLAGL-SLAKCEYLADAI 459 (467)
Q Consensus 439 ---g-g--Ris~~~~-~~~~i~~~~~~l 459 (467)
+ + ||+.... +++++++++++|
T Consensus 371 ~~~~~~~lRis~~~~~t~edid~~~~~L 398 (398)
T cd00613 371 YLPVDGTLMIEPTETETKEELDALLEAL 398 (398)
T ss_pred ccCCCCeEEEEcCCCCCHHHHHHHHHhC
Confidence 2 2 8887543 779999998764
No 152
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.92 E-value=9.9e-23 Score=206.89 Aligned_cols=336 Identities=12% Similarity=0.025 Sum_probs=209.1
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCC----cchHHHHHHHHHHHhCCCCcccccCceeeeec
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPI----EGLAAFNKVTAELLFGADNSVLKEQRVATVQG 157 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~----~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t 157 (467)
+.+.|||..|.....-+. .+|.+.+++.+.+... ..|... .-..++.+.+++++. . ..+++++ +
T Consensus 35 G~~~id~~~~~~~~~lG~--~~p~v~~a~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~~----~--~~~~v~~--~ 102 (413)
T cd00610 35 GNRYLDFLSGIGVLNLGH--NHPEVVEALKEQLAKL--THFSLGFFYNEPAVELAELLLALTP----E--GLDKVFF--V 102 (413)
T ss_pred CCEEEEcCccHHhhccCC--CCHHHHHHHHHHHHhC--cCccCcccCCHHHHHHHHHHHHhCC----C--CCCEEEE--c
Confidence 457899998743222232 3677888888877542 233322 234455555555532 1 2678988 9
Q ss_pred CCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhC-------------CCCeEEeeeecC----CCCCCChhhHH
Q 012238 158 LSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDA-------------RVPWSEYRYYDP----KTVGLDFEGMI 220 (467)
Q Consensus 158 ~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~-------------G~~~~~v~~~~~----~~~~~d~~~l~ 220 (467)
+||++|+..+..++..+.++++|++.+|+|..+....... +.+++.+|..+. ..+..|++.++
T Consensus 103 ~sgsea~~~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~ 182 (413)
T cd00610 103 NSGTEAVEAALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALE 182 (413)
T ss_pred CcHHHHHHHHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHH
Confidence 9999999998555444568899999999998765433322 223555555211 12345899999
Q ss_pred HHHHcCCCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEE
Q 012238 221 ADIKAAPGGSFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVA 299 (467)
Q Consensus 221 ~~l~~~~~~~~~i~i~~p~NPTG~~~-~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 299 (467)
+.+++.+.+..++++...+|++|..+ +.+++++|.++|++||+++|+||+|.++...+ ..... .......+ +
T Consensus 183 ~~l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g---~~~~~-~~~~~~~d---~ 255 (413)
T cd00610 183 EALEEHPEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTG---KMFAF-EHFGVEPD---I 255 (413)
T ss_pred HHHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCc---chhhH-hhcCCCCC---e
Confidence 99875434566777777777779876 67779999999999999999999998874321 11111 11121223 3
Q ss_pred ecCccCcccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHH--HhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHH
Q 012238 300 QSYSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQL--KRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEM 377 (467)
Q Consensus 300 ~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l 377 (467)
.|+||.++. |+|+||++ +++++++. + .......+.+.+.+.+.++..+|+.- ++
T Consensus 256 ~t~sK~l~~-g~~~g~~~---~~~~~~~~------------~~~~~~~~~~t~~~~~~~~~a~~a~l~~l------~~-- 311 (413)
T cd00610 256 VTLGKGLGG-GLPLGAVL---GREEIMDA------------FPAGPGLHGGTFGGNPLACAAALAVLEVL------EE-- 311 (413)
T ss_pred EEEcccccC-ccccEEEE---EcHHHHHh------------hccCCCCCCCCCCcCHHHHHHHHHHHHHH------Hh--
Confidence 488999995 89999995 67777776 3 22222223345566666665554211 11
Q ss_pred HHHHHHHHHHHHHHHHHhhhccCCC-CCcccccCCcceEEecCC------------C-HHHHHHHHHcccEEEeCCC---
Q 012238 378 EMMAGRIKNVRQKLFDSLSAKDKSG-KDWSFILRQIGMFSFTGL------------N-KAQSDNMTNKWHVYMTKDG--- 440 (467)
Q Consensus 378 ~~~~~~~~~~r~~l~~~l~~~~g~~-~~~~~~~~~~g~f~~~~l------------~-~~~~~~ll~~~gI~v~~gg--- 440 (467)
....++++++++++.+.|+ .+... .......+. |.++|+.+ . .++.+.++ ++||.+.+++
T Consensus 312 ~~~~~~~~~~~~~l~~~l~-~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~gv~v~~~~~~~ 388 (413)
T cd00610 312 EGLLENAAELGEYLRERLR-ELAEKHPLVGDVRGR-GLMIGIELVKDRATKPPDKELAAKIIKAAL-ERGLLLRPSGGNV 388 (413)
T ss_pred ccHHHHHHHHHHHHHHHHH-HHHhhCCcEEEeecC-ceEEEEEEecCCCcCCcchHHHHHHHHHHH-HCCeEEeecCCCE
Confidence 2345666666677777666 54210 001112334 44544422 1 12344555 4699999973
Q ss_pred -eEEecc-CChhhHHHHHHHHHHHH
Q 012238 441 -RISLAG-LSLAKCEYLADAIIDSY 463 (467)
Q Consensus 441 -Ris~~~-~~~~~i~~~~~~l~~~l 463 (467)
|++++. .+++++++++++|++++
T Consensus 389 lR~~~~~~~t~~~i~~~~~~l~~~l 413 (413)
T cd00610 389 IRLLPPLIITEEEIDEGLDALDEAL 413 (413)
T ss_pred EEEECCCcCCHHHHHHHHHHHHHhC
Confidence 887664 37899999999998764
No 153
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.92 E-value=3.3e-22 Score=201.63 Aligned_cols=331 Identities=13% Similarity=0.032 Sum_probs=211.4
Q ss_pred CCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCC
Q 012238 98 LQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPG 177 (467)
Q Consensus 98 ~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~g 177 (467)
+...+++.|++++.... ..| ...+..++++.+.+.+....|.. ..+.+++ +++|++++..+ +...+.+|
T Consensus 16 GP~~~~~~V~~a~~~~~-----~~~-~~~~~~~~~~~~~~~l~~~~g~~-~~~~vi~--~~~gt~a~~~a--~~~~~~~G 84 (401)
T PLN02409 16 GPVNIPERVLRAMNRPN-----EDH-RSPAFPALTKELLEDVKYIFKTK-SGTPFIF--PTTGTGAWESA--LTNTLSPG 84 (401)
T ss_pred CCCCCCHHHHHHhcCCC-----CCC-CCHHHHHHHHHHHHHHHHHhCCC-CCCEEEE--eCCcHHHHHHH--HHhcCCCC
Confidence 33446788888875532 222 13345556655555554433332 1234556 78899999887 44456799
Q ss_pred CEEEEcCCCCcch--HHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCC-CCcEEEEeCCCCCCCCCCCCHHHHHHH
Q 012238 178 AKVLISSPTWGNH--KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP-GGSFILLHGCAHNPTGIDPTPEQWEKI 254 (467)
Q Consensus 178 d~Vlv~~P~y~~~--~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~-~~~~~i~i~~p~NPTG~~~~~~~l~~l 254 (467)
|+|++++++|..+ ...++..|++++.++.+ .+..+|++.+++.+++.+ ++++++++++++||||.+++.+++.++
T Consensus 85 d~Vlv~~~~~~~~~~~~~~~~~g~~v~~v~~~--~~~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~~~~i~~l 162 (401)
T PLN02409 85 DKVVSFRIGQFSLLWIDQMQRLNFDVDVVESP--WGQGADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTNDLAGVRKL 162 (401)
T ss_pred CEEEEeCCCchhHHHHHHHHHcCCceEEEECC--CCCCCCHHHHHHHHhhCcCCCccEEEEEeecccccccCCHHHHHHH
Confidence 9999999988654 56778899999999874 334589999999998421 367899999999999999998877777
Q ss_pred HHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecCCHHHHhhhhh---
Q 012238 255 ADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARCCE--- 331 (467)
Q Consensus 255 ~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~--- 331 (467)
++ |+++|+++|+|+++. +..-..+.+ +. ...+++.|.+|.++.| .++||++ .+++.+++...
T Consensus 163 ~~-~~~~g~~~vvD~v~s-~g~~~id~~--------~~-~~D~~~~s~~K~l~~P-~G~G~l~---~~~~~~~~~~~~~~ 227 (401)
T PLN02409 163 LD-CAQHPALLLVDGVSS-IGALDFRMD--------EW-GVDVALTGSQKALSLP-TGLGIVC---ASPKALEASKTAKS 227 (401)
T ss_pred Hh-hhccCcEEEEEcccc-cCCcccccc--------cc-CccEEEEcCccccCcC-CCcceeE---ECHHHHHHHhcCCC
Confidence 77 999999999999965 322111111 11 2246677779988654 3689996 56666665000
Q ss_pred -hhHHHHHHHHHhhcc-Cc-cCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccc
Q 012238 332 -VAVIQVKSQLKRLAR-PM-YSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFI 408 (467)
Q Consensus 332 -~~~~~~~~~l~~~~~-~~-~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~ 408 (467)
+.+.......+.... .. ...++...+.++..+++.- . +..++++++++++.++++.+.|+ ++|+ +..
T Consensus 228 ~~~~~~~~~~~~~~~~g~~~~~Tp~~~~~~al~~al~~~---~--~~G~e~i~~~~~~l~~~l~~~L~-~~g~----~~~ 297 (401)
T PLN02409 228 PRVFFDWADYLKFYKLGTYWPYTPSIQLLYGLRAALDLI---F--EEGLENVIARHARLGEATRLAVE-AWGL----KLC 297 (401)
T ss_pred CCeecCHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHH---H--HhhHHHHHHHHHHHHHHHHHHHH-HcCC----eec
Confidence 000000000100000 01 1134444444444444311 1 23477888999999999999998 8774 433
Q ss_pred cCC----cceEEec----CCCHH-HHHHHHHcccEEEeCC-----C---eEEecc-CChhhHHHHHHHHHHHHHhc
Q 012238 409 LRQ----IGMFSFT----GLNKA-QSDNMTNKWHVYMTKD-----G---RISLAG-LSLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 409 ~~~----~g~f~~~----~l~~~-~~~~ll~~~gI~v~~g-----g---Ris~~~-~~~~~i~~~~~~l~~~l~~~ 466 (467)
.+. .+...++ +.+.+ +...+++++||.+..| | ||+... .+.+++.+++++|.++++++
T Consensus 298 ~~~~~~~s~~v~~~~~p~~~~~~~l~~~l~~~~~i~i~~G~~~~~~~~~Rig~~g~~~~~~~~~~~~~~~~~l~~~ 373 (401)
T PLN02409 298 TKKPEWRSDTVTAVVVPEGIDSAEIVKNAWKKYNLSLGLGLNKVAGKVFRIGHLGNVNELQLLGALAGVEMVLKDV 373 (401)
T ss_pred cCChhhcccceEEEeCCCCCCHHHHHHHHHHhCCEEEEcCCCcccCCEEEEcCCCCCCHHHHHHHHHHHHHHHHHc
Confidence 321 2111222 34544 4567778899999876 2 898543 47799999999999998764
No 154
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.92 E-value=7.3e-22 Score=199.65 Aligned_cols=327 Identities=14% Similarity=0.066 Sum_probs=210.3
Q ss_pred CCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCC------CcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeee
Q 012238 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGEN------KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQ 156 (467)
Q Consensus 83 ~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~------~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~ 156 (467)
.+.++|+...|. +... +|.+++++.+.++.... ..|.......+|++.+++++.. ++ .++
T Consensus 45 ~~~~~~~sn~yl---gl~~-~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~g~-------~~-~l~-- 110 (402)
T TIGR01821 45 KDVTVWCSNDYL---GMGQ-HPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLHGK-------ES-ALV-- 110 (402)
T ss_pred eeEEEeEccCcC---CCCC-CHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHhCC-------Ce-EEE--
Confidence 468999988773 4444 77888888887754110 1122344567899999999642 23 344
Q ss_pred cCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCC-CCcEEEEe
Q 012238 157 GLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP-GGSFILLH 235 (467)
Q Consensus 157 t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~-~~~~~i~i 235 (467)
+++|++++..+..++....+|+.|+.....|......++..|+++..++. .|++.+++.++... .+++++++
T Consensus 111 ~~sG~~an~~ai~~l~~~~~~~~v~~~~~~h~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~v~~ 183 (402)
T TIGR01821 111 FTSGYVANDATLATLAKIIPGCVIFSDELNHASMIEGIRHSGAEKFIFRH-------NDVAHLEKLLQSVDPNRPKIIAF 183 (402)
T ss_pred ECchHHHHHHHHHHhhCCCCCCEEEEcchHhHHHHHHHHHcCCeEEEECC-------CCHHHHHHHHHhccCCCCeEEEE
Confidence 46778887776322222226776666555666565666777877655433 47788888876432 35789999
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhc-CCeEEEEecCccCcccCCCccc
Q 012238 236 GCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR-GMELLVAQSYSKNLGLYAERIG 314 (467)
Q Consensus 236 ~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~S~SK~~~~~G~RiG 314 (467)
++|+||||.+.+ +++|.++|++||+++|+||+|....++... . ........ ...+++++||||.+|++| |
T Consensus 184 e~~~~~~G~~~~---l~~i~~l~~~~~~~livDea~~~G~~g~~g-~--g~~~~~~~~~~~div~~t~sKa~g~~G---G 254 (402)
T TIGR01821 184 ESVYSMDGDIAP---IEEICDLADKYGALTYLDEVHAVGLYGPRG-G--GIAERDGLMHRIDIIEGTLAKAFGVVG---G 254 (402)
T ss_pred cCCCCCCCCccC---HHHHHHHHHHcCCEEEEeCcccccccCCCC-C--ccchhccCCCCCeEEEEechhhhccCC---c
Confidence 999999999988 457777799999999999998733333110 1 11011111 123688899999999888 8
Q ss_pred eEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCc--cCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 012238 315 AMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPM--YSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLF 392 (467)
Q Consensus 315 ~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~ 392 (467)
|++ +++++++. +....... ..+.+...+.++..+|+.. ++ ....++++.++++++.
T Consensus 255 ~i~---~~~~~~~~------------l~~~~~~~~~t~~~~~~~~aaa~aaL~~~------~~-~~~~~~~~~~~~~~l~ 312 (402)
T TIGR01821 255 YIA---ASRKLIDA------------IRSYAPGFIFTTSLPPAIAAGATASIRHL------KE-SQDLRRAHQENVKRLK 312 (402)
T ss_pred eee---cCHHHHHH------------HHHhCcCceecCcCCHHHHHHHHHHHHHh------hc-CHHHHHHHHHHHHHHH
Confidence 884 78888776 44333321 2245555555555555321 11 1344556678889999
Q ss_pred HHhhhccCCCCCcccccCCcceEEe-cCC---CHHHHHHHHHcccEEEeCC-------C----eEEecc-CChhhHHHHH
Q 012238 393 DSLSAKDKSGKDWSFILRQIGMFSF-TGL---NKAQSDNMTNKWHVYMTKD-------G----RISLAG-LSLAKCEYLA 456 (467)
Q Consensus 393 ~~l~~~~g~~~~~~~~~~~~g~f~~-~~l---~~~~~~~ll~~~gI~v~~g-------g----Ris~~~-~~~~~i~~~~ 456 (467)
+.|+ ++| +++..+.+++..+ ++. ..++.+++++++||++.+. | ||++.. .+++++++++
T Consensus 313 ~~L~-~~g----~~~~~~~~~i~~i~~~~~~~a~~~~~~L~~~~Gi~v~~~~~p~~~~g~~~lRis~~~~~t~edi~~~~ 387 (402)
T TIGR01821 313 NLLE-ALG----IPVIPNPSHIVPVIIGDAALCKKVSDLLLNKHGIYVQPINYPTVPRGTERLRITPTPAHTDKMIDDLV 387 (402)
T ss_pred HHHH-HcC----CCcCCCCCCEEEEEeCCHHHHHHHHHHHHhcCCEEEEeECCCCCCCCCceEEEEeCCCCCHHHHHHHH
Confidence 9998 877 4556666664322 232 1245566666679998652 2 888642 3789999999
Q ss_pred HHHHHHHHhc
Q 012238 457 DAIIDSYHNV 466 (467)
Q Consensus 457 ~~l~~~l~~~ 466 (467)
++|+++++++
T Consensus 388 ~~l~~~~~~~ 397 (402)
T TIGR01821 388 EALLLVWDRL 397 (402)
T ss_pred HHHHHHHHHc
Confidence 9999998764
No 155
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.91 E-value=9.5e-22 Score=199.17 Aligned_cols=326 Identities=14% Similarity=0.087 Sum_probs=209.7
Q ss_pred CCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcC-C-----CCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeee
Q 012238 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-E-----NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQ 156 (467)
Q Consensus 83 ~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~-~-----~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~ 156 (467)
.+.++|+..+|. +... +|.+.+++.+.+... . ...|.+.....+|++.+|+++. . ++.+++
T Consensus 46 ~~~~~~~s~dyl---gl~~-~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~g-~------~~~~~~-- 112 (407)
T PRK09064 46 REVTVWCSNDYL---GMGQ-HPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLHG-K------EAALVF-- 112 (407)
T ss_pred ceEEEEECCCCc---CCCC-CHHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHhC-C------CcEEEE--
Confidence 468999987763 5554 677888888776431 1 0123355567889999999863 2 344554
Q ss_pred cCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCC-CCcEEEEe
Q 012238 157 GLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP-GGSFILLH 235 (467)
Q Consensus 157 t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~-~~~~~i~i 235 (467)
++|+++...+..++....+++.|+.....+......++..|+++..++. .|++.+++.++... ++++++++
T Consensus 113 -~sG~~an~~ai~~l~~~~~~~~i~~~~~~h~s~~~~~~~~~~~~~~~~~-------~d~~~le~~l~~~~~~~~~~v~~ 184 (407)
T PRK09064 113 -TSGYVSNDATLSTLAKLIPDCVIFSDELNHASMIEGIRRSRCEKHIFRH-------NDVAHLEELLAAADPDRPKLIAF 184 (407)
T ss_pred -CcHHHHHHHHHHHHhCCCCCCEEEEeCcchHHHHHHHHHcCCcEEEECC-------CCHHHHHHHHHhccCCCCeEEEE
Confidence 5566666654222222236666666655565555666777777655543 47888888886432 46789999
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhc-CCeEEEEecCccCcccCCCccc
Q 012238 236 GCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR-GMELLVAQSYSKNLGLYAERIG 314 (467)
Q Consensus 236 ~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~S~SK~~~~~G~RiG 314 (467)
++++||+|.+.+ +++|.++|+++|+++|+||+|....++.. .. .+....+. ...+++++||||.||++| |
T Consensus 185 ~~v~s~~G~~~~---l~~i~~l~~~~~~~livDEa~~~G~~g~~-g~--g~~~~~~~~~~~div~~t~sKa~g~~G---G 255 (407)
T PRK09064 185 ESVYSMDGDIAP---IAEICDLADKYNALTYLDEVHAVGMYGPR-GG--GIAERDGLMDRIDIIEGTLAKAFGVMG---G 255 (407)
T ss_pred eCCCCCCccccC---HHHHHHHHHHcCCEEEEECCCcccccCCC-CC--ChHHhcCCCCCCeEEEEecchhhhccC---c
Confidence 999999999887 55677779999999999999873223311 11 11111111 134788999999999888 9
Q ss_pred eEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCc--cCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 012238 315 AMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPM--YSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLF 392 (467)
Q Consensus 315 ~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~ 392 (467)
|++ +++++++. +.....+. ..+.+...+.++...|+ + .+.....+++++++++++.
T Consensus 256 ~~~---~~~~~~~~------------l~~~~~~~~~t~~~~~~~~~aa~~al~---~----~~~~~~~~~~~~~~~~~l~ 313 (407)
T PRK09064 256 YIA---GSAALVDA------------VRSYAPGFIFTTSLPPAIAAAALASIR---H----LKESNEERERHQERAAKLK 313 (407)
T ss_pred eEe---cCHHHHHH------------HHHhCccccccCcCCHHHHHHHHHHHH---H----HhcCHHHHHHHHHHHHHHH
Confidence 984 77887776 44433322 22344444444444432 1 1112344678888999999
Q ss_pred HHhhhccCCCCCcccccCCcceEEec--CC---CHHHHHHHHHcccEEEeCC-------C----eEEecc-CChhhHHHH
Q 012238 393 DSLSAKDKSGKDWSFILRQIGMFSFT--GL---NKAQSDNMTNKWHVYMTKD-------G----RISLAG-LSLAKCEYL 455 (467)
Q Consensus 393 ~~l~~~~g~~~~~~~~~~~~g~f~~~--~l---~~~~~~~ll~~~gI~v~~g-------g----Ris~~~-~~~~~i~~~ 455 (467)
+.|+ ++| +++..+.+++ +++ +. ..++.+++++++||++.+. | ||+++. .++++++++
T Consensus 314 ~~L~-~~g----~~~~~~~~~i-v~i~~~~~~~~~~l~~~L~~~~gi~v~~~~~p~~~~~~~~lRis~~~~~t~edi~~l 387 (407)
T PRK09064 314 AALD-AAG----IPVMPNESHI-VPVMVGDPEKCKKASDMLLEEHGIYVQPINYPTVPRGTERLRITPTPFHTDEMIDHL 387 (407)
T ss_pred HHHH-HcC----CCCCCCCCCE-EEEEeCCHHHHHHHHHHHHHhCCEEEeeECCCCCCCCCceEEEEeCCCCCHHHHHHH
Confidence 9999 876 4555555554 333 22 1244566766679998652 2 888753 378999999
Q ss_pred HHHHHHHHHhc
Q 012238 456 ADAIIDSYHNV 466 (467)
Q Consensus 456 ~~~l~~~l~~~ 466 (467)
+++|+++++++
T Consensus 388 ~~~l~~~~~~~ 398 (407)
T PRK09064 388 VEALVEVWARL 398 (407)
T ss_pred HHHHHHHHHHc
Confidence 99999998764
No 156
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.91 E-value=5.6e-22 Score=198.84 Aligned_cols=334 Identities=11% Similarity=0.021 Sum_probs=213.0
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCch
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (467)
+.+.+||..|..-..-|. .+|.|.+++.+.++... . . ......+++..+++++....+ .+++++ +++|+
T Consensus 28 G~~~lD~~s~~~~~~lG~--~~p~v~~a~~~~~~~~~-~-~-~~~~~~~~~~~la~~l~~~~~----~~~~~~--~~sG~ 96 (377)
T PRK02936 28 GKTYLDFTSGIAVCNLGH--CHPTVTKAVQEQLDDIW-H-V-SNLFTNSLQEEVASLLAENSA----GDLVFF--CNSGA 96 (377)
T ss_pred CCEEEECCcchhhccCCC--CCHHHHHHHHHHHHhcc-c-c-ccccCCHHHHHHHHHHHhcCC----CCEEEE--eCCcH
Confidence 357899988862111243 36788888888875421 1 1 223456788999999876432 247877 89999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchHH-HHhhCCCCeE---EeeeecCCCC--CCChhhHHHHHHcCCCCcEEEEe
Q 012238 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKN-IFNDARVPWS---EYRYYDPKTV--GLDFEGMIADIKAAPGGSFILLH 235 (467)
Q Consensus 162 ~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~-~~~~~G~~~~---~v~~~~~~~~--~~d~~~l~~~l~~~~~~~~~i~i 235 (467)
+|...+.++.......++|++.+++|..... .+...|.... ..+..++..+ -.|++.+++.+. ++++++++
T Consensus 97 ~a~~~A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~---~~~~~ii~ 173 (377)
T PRK02936 97 EANEAALKLARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVMN---EEVAAVML 173 (377)
T ss_pred HHHHHHHHHHHHhcCCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCCCCHHHHHHhcc---CCeEEEEE
Confidence 9999985432222333679999999974432 2222222110 0111101000 127889988886 56788888
Q ss_pred CCCCCCCCCC-CCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccc
Q 012238 236 GCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIG 314 (467)
Q Consensus 236 ~~p~NPTG~~-~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG 314 (467)
..+++++|.. .+++.+++|.++|++||+++|+||+|.++...+ ..+....+ ...+++ .+|||.++ +|+|+|
T Consensus 174 e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g---~~~~~~~~-~~~~di---~t~sK~l~-~G~~ig 245 (377)
T PRK02936 174 EVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTG---TLFAYEQF-GLDPDI---VTVAKGLG-NGIPVG 245 (377)
T ss_pred ecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCc---hhhHHHhh-CCCCcE---EEEccccc-CCCccE
Confidence 9999999987 578999999999999999999999998876532 12121111 222233 36999999 999999
Q ss_pred eEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012238 315 AMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDS 394 (467)
Q Consensus 315 ~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~ 394 (467)
|++ +++++++. +.........+.+.+.|.++..+|+... -+...++++++++.+.+.
T Consensus 246 ~v~---~~~~~~~~------------~~~~~~~~t~~~~~~~~aaa~a~l~~~~--------~~~~~~~~~~~~~~l~~~ 302 (377)
T PRK02936 246 AMI---GKKELGTA------------FGPGSHGSTFGGNPLAMAAAKEVLQVIK--------QPSFLEEVQEKGEYFLQK 302 (377)
T ss_pred EEE---EcHHHHhh------------ccCCCCCCCCCCCHHHHHHHHHHHHHHH--------hccHHHHHHHHHHHHHHH
Confidence 995 77777776 5433333344577788888887775321 012334555566666666
Q ss_pred hhhcc--CCCCCcccccCCcceEEecCCC--HHHHHHHHHcccEEEeCCC----eEEe-ccCChhhHHHHHHHHHHHH
Q 012238 395 LSAKD--KSGKDWSFILRQIGMFSFTGLN--KAQSDNMTNKWHVYMTKDG----RISL-AGLSLAKCEYLADAIIDSY 463 (467)
Q Consensus 395 l~~~~--g~~~~~~~~~~~~g~f~~~~l~--~~~~~~ll~~~gI~v~~gg----Ris~-~~~~~~~i~~~~~~l~~~l 463 (467)
|+ +. +++. +....+ .|+++|+.+. .+.+.+.+.++||.+.++| ||++ ...+++++++++++|++++
T Consensus 303 L~-~~~~~~~~-~~~v~~-~g~~~~i~~~~~~~~~~~~l~~~gv~v~~~g~~~lRi~p~~~~~~~~i~~~i~~l~~~~ 377 (377)
T PRK02936 303 LQ-EELEHLEC-VKNIRG-KGLMIGIECTEEVAPVIEQLREEGLLVLSAGPNVIRLLPPLVVTKEELDQAVYLLKKVL 377 (377)
T ss_pred HH-HHHhhCCc-EEeEee-cceEEEEEecchHHHHHHHHHHCCeEEecCCCCEEEEECCcccCHHHHHHHHHHHHHhC
Confidence 65 42 1211 122223 4678888663 3334445556799999876 8885 3448899999999998764
No 157
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.91 E-value=2.8e-22 Score=202.60 Aligned_cols=329 Identities=16% Similarity=0.102 Sum_probs=210.3
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCC-CcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCc
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGEN-KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 160 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~-~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~gg 160 (467)
+.+.|||..|.-.+.-|. -.|.+.+++.+.++.... ..+....-..++.+.++++. . .+.+.+ +++|
T Consensus 39 G~~~iD~~~~~~~~~lGh--~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~-------~~~~~~--~~sG 106 (403)
T PRK05093 39 GKEYIDFAGGIAVTALGH--CHPALVKALKEQGEKLWHISNVFTNEPALRLAKKLIDAT-F-------AERVFF--ANSG 106 (403)
T ss_pred CCEEEEcCcCHHhccCCC--CCHHHHHHHHHHHHhcCcccCccCCHHHHHHHHHHHhhC-C-------CCEEEE--eCch
Confidence 357899987732122243 367888888887754211 11111111234555555542 1 247888 8999
Q ss_pred hhHHHHHHHHHHHhC------CCCEEEEcCCCCcchHH-HHhhCC------------CCeEEeeeecCCCCCCChhhHHH
Q 012238 161 TGSLRLAAALIERYF------PGAKVLISSPTWGNHKN-IFNDAR------------VPWSEYRYYDPKTVGLDFEGMIA 221 (467)
Q Consensus 161 t~al~l~~~~l~~~~------~gd~Vlv~~P~y~~~~~-~~~~~G------------~~~~~v~~~~~~~~~~d~~~l~~ 221 (467)
++|...+..+..... ..++|+..+-+|.+... .+...| .+++.++. .|++.+++
T Consensus 107 seA~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~ 179 (403)
T PRK05093 107 AEANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPF-------NDLAAVKA 179 (403)
T ss_pred HHHHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeCC-------CCHHHHHH
Confidence 999999865543331 23578888888866533 222111 11222221 37889988
Q ss_pred HHHcCCCCcEEEEeCCCCCCCCCCC--CHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEE
Q 012238 222 DIKAAPGGSFILLHGCAHNPTGIDP--TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVA 299 (467)
Q Consensus 222 ~l~~~~~~~~~i~i~~p~NPTG~~~--~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 299 (467)
.+. +++++++++ |.||+|.++ +.+.+++|+++|++||+++|+||+|.++.+.+ ..++. ......++ +
T Consensus 180 ~l~---~~~aaiiie-p~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g---~~~~~-~~~~~~pd---i 248 (403)
T PRK05093 180 VID---DHTCAVVVE-PIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTG---DLFAY-MHYGVTPD---I 248 (403)
T ss_pred Hhc---CCeEEEEEe-cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCc---cchhh-hhcCCCCC---E
Confidence 886 456677666 888888775 88999999999999999999999999886543 11111 11111122 5
Q ss_pred ecCccCcccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHH
Q 012238 300 QSYSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEM 379 (467)
Q Consensus 300 ~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~ 379 (467)
.||||.++ +|+|+||++ .++++++. +.......+.+.+.+.|.++..+|+.. . -.+
T Consensus 249 ~s~sK~l~-~G~rig~vv---~~~~i~~~------------l~~~~~~~t~~~~~~~~~aa~a~L~~~------~--~~~ 304 (403)
T PRK05093 249 LTSAKALG-GGFPIGAML---TTAEIASH------------FKVGTHGSTYGGNPLACAVAEAVFDII------N--TPE 304 (403)
T ss_pred EEeccccc-CCcceEEEE---EcHHHHhh------------cCCCCCCCCCCCCHHHHHHHHHHHHHH------h--hcc
Confidence 68999999 999999996 77777776 544333334456777787777765321 0 124
Q ss_pred HHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceEEecCC-------CHHHHHHHHHcccEEEeCCC----eEEeccC-
Q 012238 380 MAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL-------NKAQSDNMTNKWHVYMTKDG----RISLAGL- 447 (467)
Q Consensus 380 ~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~~~g~f~~~~l-------~~~~~~~ll~~~gI~v~~gg----Ris~~~~- 447 (467)
..++++++++++.+.|+ +++....+....+.+|+++|+.+ +.++++.+++ +||.+.++| ||+++..
T Consensus 305 ~~~~~~~~~~~l~~~L~-~~~~~~~~~~~~~~~G~~~~~~l~~~~~~~~~~~~~~l~~-~Gv~v~~~g~~~lRl~~~~~~ 382 (403)
T PRK05093 305 VLEGVKARRQRFVDGLQ-KINQKYGVFSEIRGMGLLIGAELKPQYKGRARDFLNAAAE-EGVMVLVAGPDVLRFAPSLVI 382 (403)
T ss_pred HHHHHHHHHHHHHHHHH-HHHhhCCCeEeEeeCceEEEEEecCcchhHHHHHHHHHHH-CCeEEecCCCCEEEEeCCCCC
Confidence 55778888899999988 65321111123445677877643 2345667776 599999865 8865543
Q ss_pred ChhhHHHHHHHHHHHHHhc
Q 012238 448 SLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 448 ~~~~i~~~~~~l~~~l~~~ 466 (467)
+++++++++++|.+++.++
T Consensus 383 ~~~~i~~~~~~l~~~l~~~ 401 (403)
T PRK05093 383 EEADIDEGLARFEKAVAKV 401 (403)
T ss_pred CHHHHHHHHHHHHHHHHHh
Confidence 8899999999999998754
No 158
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.91 E-value=2.8e-22 Score=200.85 Aligned_cols=314 Identities=16% Similarity=0.137 Sum_probs=205.1
Q ss_pred cCCCCCCCCchHHHHHHHHHHHhcCCC--C----cCC--CCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHH
Q 012238 93 YRTEELQPYVLDVVKKAENLMLERGEN--K----EYL--PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSL 164 (467)
Q Consensus 93 ~~d~~~~p~~~~~v~~a~~~~~~~~~~--~----~Y~--~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al 164 (467)
|+|.++.+++++.+.+++.+.+..... . .+. -.....++|+.++++++.. +++++++ |+|+++++
T Consensus 2 yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~-----~~~~v~~--~~g~t~a~ 74 (373)
T cd06453 2 YLDNAATSQKPQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFINAP-----SPDEIIF--TRNTTEAI 74 (373)
T ss_pred cccCccccCCCHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCC-----CCCeEEE--eCCHHHHH
Confidence 345556666688899998887632110 0 000 1234678999999997543 1568888 99999999
Q ss_pred HHHHHHHHHhC---CCCEEEEcCCCCcch----HHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCC
Q 012238 165 RLAAALIERYF---PGAKVLISSPTWGNH----KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGC 237 (467)
Q Consensus 165 ~l~~~~l~~~~---~gd~Vlv~~P~y~~~----~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~ 237 (467)
+++ +.+... +||+|++++|+|+.. ...++..|++++.++.+ .++.+|++.+++.+. ++++++++++
T Consensus 75 ~~~--~~~l~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~l~---~~~~~v~~~~ 147 (373)
T cd06453 75 NLV--AYGLGRANKPGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVD--DDGQLDLEALEKLLT---ERTKLVAVTH 147 (373)
T ss_pred HHH--HHHhhhcCCCCCEEEECcchhHHHHHHHHHHHhhcCcEEEEeecC--CCCCcCHHHHHHHhc---CCceEEEEeC
Confidence 987 344445 899999999999764 34556789999999984 456799999999997 4778999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEE
Q 012238 238 AHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMN 317 (467)
Q Consensus 238 p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~ 317 (467)
++||||.+.+.+ +|+++|+++|++|++|++|...... .+ + ... ...+++.|++|.++. .++||++
T Consensus 148 ~~~~tG~~~~~~---~i~~~~~~~~~~li~D~a~~~~~~~---~~---~---~~~-~~d~~~~s~~K~~~~--~g~g~~~ 212 (373)
T cd06453 148 VSNVLGTINPVK---EIGEIAHEAGVPVLVDGAQSAGHMP---VD---V---QDL-GCDFLAFSGHKMLGP--TGIGVLY 212 (373)
T ss_pred cccccCCcCCHH---HHHHHHHHcCCEEEEEhhhhcCcee---ee---c---ccc-CCCEEEeccccccCC--CCcEEEE
Confidence 999999999865 6777799999999999997532211 11 1 011 224667899999985 5579885
Q ss_pred EecCCHHHHhhhhhhhHHHHHHHHHhhccC--------------------c-cCCCchHHHHHHHHHhCChhhHHHHHHH
Q 012238 318 VVCSSSDLAARCCEVAVIQVKSQLKRLARP--------------------M-YSNPPVHGARIVANVVGNPALFDEWKAE 376 (467)
Q Consensus 318 ~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~--------------------~-~~~~~~~~~~~~~~~L~~~~~~~~~~~~ 376 (467)
.+++++++ +...... . ...++.....++..++. .+. ...
T Consensus 213 ---~~~~~~~~------------~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~--~l~---~~g 272 (373)
T cd06453 213 ---GKEELLEE------------MPPYGGGGEMIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAID--YLE---KIG 272 (373)
T ss_pred ---EchHHhhc------------CCCeecCCCccccccccccccCCCccccCCCCCCHHHHHHHHHHHH--HHH---HcC
Confidence 56666665 3221100 0 01233333222222221 111 112
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccCCCCCccccc---CCcceEEec--CCCHHHHHHHHHcccEEEeCC------------
Q 012238 377 MEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFIL---RQIGMFSFT--GLNKAQSDNMTNKWHVYMTKD------------ 439 (467)
Q Consensus 377 l~~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~---~~~g~f~~~--~l~~~~~~~ll~~~gI~v~~g------------ 439 (467)
+++++++.++.++++.+.|+ +++. ++... ..++++.+. +.+.+.+.+.++++||.+.+|
T Consensus 273 ~~~~~~~~~~~~~~l~~~l~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~gi~i~~g~~~~~~~~~~~~ 348 (373)
T cd06453 273 MEAIAAHEHELTAYALERLS-EIPG---VRVYGDAEDRAGVVSFNLEGIHPHDVATILDQYGIAVRAGHHCAQPLMRRLG 348 (373)
T ss_pred HHHHHHHHHHHHHHHHHHHh-cCCC---eEEeCCccccCCeEEEEECCcCHHHHHHHHHHCCEEeccCccchhHHHHHhC
Confidence 46677778888899999988 7631 34432 234444332 335555554555579988643
Q ss_pred --C--eEEeccC-ChhhHHHHHHHH
Q 012238 440 --G--RISLAGL-SLAKCEYLADAI 459 (467)
Q Consensus 440 --g--Ris~~~~-~~~~i~~~~~~l 459 (467)
+ |||++.. +++++++++++|
T Consensus 349 ~~~~iRis~~~~~t~~di~~~~~~l 373 (373)
T cd06453 349 VPGTVRASFGLYNTEEEIDALVEAL 373 (373)
T ss_pred CCCeEEEEecCCCCHHHHHHHHhhC
Confidence 2 9998743 678999998864
No 159
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.91 E-value=2.2e-21 Score=194.88 Aligned_cols=324 Identities=14% Similarity=0.034 Sum_probs=208.2
Q ss_pred CcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCC-------CCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeee
Q 012238 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-------NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQ 156 (467)
Q Consensus 84 ~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~-------~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~ 156 (467)
+.|||.-=.. .-| +++.+.+++.+...... ...+.....+.++|+.+|++++. +++++
T Consensus 19 ~~~~~~~~~~----~~p-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~g~--------~~~~~-- 83 (387)
T PRK09331 19 EFINLDPIQR----GGI-LTPEARKALIEYGDGYSVCDYCPGRLDQIKKPPIADFHEDLAEFLGM--------DEARV-- 83 (387)
T ss_pred cccccChhhc----CCC-CCHHHHHHHHHHHhccCCCcccccccccccChHHHHHHHHHHHHhCC--------CcEEE--
Confidence 5677653222 223 37889999988773211 11122234589999999999643 35667
Q ss_pred cCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcC----CCCcEE
Q 012238 157 GLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA----PGGSFI 232 (467)
Q Consensus 157 t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~----~~~~~~ 232 (467)
++|+++++.++ +...+.+||+|+++.++|......++..|++++.++...++++.+|++.+++.+++. .+++++
T Consensus 84 ~~g~t~a~~~a--l~~l~~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~l 161 (387)
T PRK09331 84 THGAREGKFAV--MHSLCKKGDYVVLDGLAHYTSYVAAERAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPAL 161 (387)
T ss_pred eCCHHHHHHHH--HHHhcCCCCEEEECCCchHHHHHHHHHcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEE
Confidence 89999999987 455567999999999998777777889999999998742346779999999999742 136789
Q ss_pred EEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCc
Q 012238 233 LLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAER 312 (467)
Q Consensus 233 i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R 312 (467)
+++++|+||||...+ +++|+++|+++|+++|+|++|..-... .+.. .. ...+++.|++|.++ .+.|
T Consensus 162 V~l~~~~~~tG~~~~---l~~I~~la~~~g~~livD~a~~~g~~~---~~~~------~~-g~D~~~~s~~K~l~-~~~~ 227 (387)
T PRK09331 162 ALLTHVDGNYGNLAD---AKKVAKVAHEYGIPFLLNGAYTVGRMP---VDGK------KL-GADFIVGSGHKSMA-ASAP 227 (387)
T ss_pred EEEECCCCCCccccc---HHHHHHHHHHcCCEEEEECCcccCCcC---CCHH------Hc-CCCEEEeeCccccc-CCCC
Confidence 999999999998766 557777799999999999997632211 1111 11 23578999999998 4568
Q ss_pred cceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCc--------cCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q 012238 313 IGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPM--------YSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRI 384 (467)
Q Consensus 313 iG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--------~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~ 384 (467)
+||++ .++++++. +....+.+ ..+.+.....++...+. . +.+.++ ..++.
T Consensus 228 ~G~l~---~~~~~i~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aal~--~----~~~~~~-~~~~~ 285 (387)
T PRK09331 228 SGVLA---TTEEYADK------------VFRTSRKFGVKEVELLGCTLRGAPLVTLMASFP--H----VVERVK-RWDEE 285 (387)
T ss_pred EEEEE---ECHHHHhh------------cccccCCCcccceeeeceecCchHHHHHHHHHH--H----HHHHHH-HHHHH
Confidence 99985 66777776 33221111 11111111111111111 1 112222 33444
Q ss_pred HHHHHHHHHHhhhcc-CCCCCccccc---CCcceEE-e-cCC---------C-HHHHHHHHHcccEEEeCCC-----eEE
Q 012238 385 KNVRQKLFDSLSAKD-KSGKDWSFIL---RQIGMFS-F-TGL---------N-KAQSDNMTNKWHVYMTKDG-----RIS 443 (467)
Q Consensus 385 ~~~r~~l~~~l~~~~-g~~~~~~~~~---~~~g~f~-~-~~l---------~-~~~~~~ll~~~gI~v~~gg-----Ris 443 (467)
.++++++.+.|+ ++ | ++... ...++.. . .++ + .++.+.| +++||...+.| |+.
T Consensus 286 ~~~~~~l~~~L~-~l~g----~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~L-~~~gI~~~~~~~~~i~ri~ 359 (387)
T PRK09331 286 VKKARWFVDELE-KIEG----FKQLGEKPRNHDLMKFETPSFDEIAKKHKRRGFFLYEEL-KKRGIHGIKPGATKEFKLS 359 (387)
T ss_pred HHHHHHHHHHHh-cCCC----EEEeccCcCcCCeEEEeCCchhHHhhhccccchhHHHHH-HHcCceEEccCCceEEEEE
Confidence 566778888998 77 5 44442 2223221 1 111 1 1234455 55699954443 665
Q ss_pred eccCChhhHHHHHHHHHHHHHhc
Q 012238 444 LAGLSLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 444 ~~~~~~~~i~~~~~~l~~~l~~~ 466 (467)
..+.+++++++++++|+++++++
T Consensus 360 ~~g~t~~di~~l~~aL~~i~~~~ 382 (387)
T PRK09331 360 TYGLTWEQVEYVADAFKEIAEKY 382 (387)
T ss_pred eccCCHHHHHHHHHHHHHHHHhc
Confidence 53458899999999999998764
No 160
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.91 E-value=1.9e-21 Score=193.46 Aligned_cols=274 Identities=14% Similarity=0.153 Sum_probs=188.7
Q ss_pred CCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcch----HHHHhhCCC
Q 012238 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNH----KNIFNDARV 199 (467)
Q Consensus 124 ~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~----~~~~~~~G~ 199 (467)
+.....+|++++|++.+.. ..++ ++||++++.++ +..+.+||+|+++.|+|+.. ...++..|+
T Consensus 50 ~~pt~~~le~~la~l~g~~--------~~~~--~~sG~~ai~~~---~~ll~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~ 116 (366)
T PRK08247 50 GNPTRGVLEQAIADLEGGD--------QGFA--CSSGMAAIQLV---MSLFRSGDELIVSSDLYGGTYRLFEEHWKKWNV 116 (366)
T ss_pred CCchHHHHHHHHHHHhCCC--------cEEE--EcCHHHHHHHH---HHHhCCCCEEEEecCCcCcHHHHHHHHhhccCc
Confidence 5566889999999996543 2344 68899999875 45567999999999999864 445567899
Q ss_pred CeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCC
Q 012238 200 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 279 (467)
Q Consensus 200 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~ 279 (467)
+++.++. .|++.+++.++ ++++++++++|+||+|. ..++++|+++|+++|+++|+|++|.......
T Consensus 117 ~v~~vd~-------~d~~~l~~~i~---~~tklv~le~P~NP~~~---~~dl~~I~~la~~~g~~lIvD~t~~~~~~~~- 182 (366)
T PRK08247 117 RFVYVNT-------ASLKAIEQAIT---PNTKAIFIETPTNPLMQ---ETDIAAIAKIAKKHGLLLIVDNTFYTPVLQR- 182 (366)
T ss_pred eEEEECC-------CCHHHHHHhcc---cCceEEEEECCCCCCCc---HHHHHHHHHHHHHcCCEEEEECCCccccccC-
Confidence 8888765 48899999887 57889999999999864 6778899999999999999999985332211
Q ss_pred CCChhHHHHHHhcCCeEEEEecCccCcccC-CCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHH
Q 012238 280 DNDASSVRLFATRGMELLVAQSYSKNLGLY-AERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGAR 358 (467)
Q Consensus 280 ~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~-G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 358 (467)
++ . ....++++|+||.++.+ +++.||++ +.++++.+. +...+.......+...+.
T Consensus 183 -----p~----~-~g~di~i~S~sK~~~g~~d~~~G~iv--~~~~~l~~~------------~~~~~~~~g~~~s~~~a~ 238 (366)
T PRK08247 183 -----PL----E-EGADIVIHSATKYLGGHNDVLAGLVV--AKGQELCER------------LAYYQNAAGAVLSPFDSW 238 (366)
T ss_pred -----ch----h-cCCcEEEeecceeccCCCceeeeEEe--cChHHHHHH------------HHHHHHhcCCCCChHHHH
Confidence 11 1 13468999999999743 46889885 344666665 433333333345555666
Q ss_pred HHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcc-c-ccCCcceEEecCC-CHHHHHHHHHc----
Q 012238 359 IVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWS-F-ILRQIGMFSFTGL-NKAQSDNMTNK---- 431 (467)
Q Consensus 359 ~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~~~~~~-~-~~~~~g~f~~~~l-~~~~~~~ll~~---- 431 (467)
++...|.. +....++++++++.+.+.|+ +.+ + +. + .++.||+|.|. + ..+...++++.
T Consensus 239 l~~~~l~t----------l~~r~~~~~~~a~~l~~~L~-~~p--~-v~~v~~P~~gg~~sf~-~~~~~~~~~~~~~l~~~ 303 (366)
T PRK08247 239 LLIRGMKT----------LALRMRQHEENAKAIAAFLN-EQP--G-VTDVLYPGRGGMLSFR-LQDEEWVNPFLKSLKLI 303 (366)
T ss_pred HHHhccCc----------HHHHHHHHHHHHHHHHHHHH-hCC--C-eeEEecCCcCcEEEEE-ECCHHHHHHHHHcCCcc
Confidence 65554432 33455567889999999998 652 2 33 3 44489999884 3 23333333331
Q ss_pred ---------ccEEEeCC---------------C------eEEeccCChhhHHHHHHHHHHHHHhc
Q 012238 432 ---------WHVYMTKD---------------G------RISLAGLSLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 432 ---------~gI~v~~g---------------g------Ris~~~~~~~~i~~~~~~l~~~l~~~ 466 (467)
..+.+.|+ | |||++- |+.+.+++-|.++++.+
T Consensus 304 ~~~~slg~~~sl~~~p~~~~~~~~~~~~r~~~gi~~~~~R~svGl---E~~~dl~~dl~~al~~~ 365 (366)
T PRK08247 304 TFAESLGGVESFITYPATQTHADIPEEIRIANGVCNRLLRFSVGI---ENVEDLIADLKQAFKQV 365 (366)
T ss_pred eEccCCCCCceEEECCcccccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHhhc
Confidence 22333343 2 999987 67777777887777654
No 161
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.91 E-value=7e-22 Score=198.29 Aligned_cols=323 Identities=14% Similarity=0.049 Sum_probs=205.4
Q ss_pred cCCCCCCCCchHHHHHHHHHHHhcCCCCcCCC---------CcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhH
Q 012238 93 YRTEELQPYVLDVVKKAENLMLERGENKEYLP---------IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 163 (467)
Q Consensus 93 ~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~---------~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a 163 (467)
|+|..+..++++.+++++.+.+... ..+.. ..-..++|+.++++++.. +++|++ |.|+|++
T Consensus 2 yld~aa~~~~~~~v~~a~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~------~~~i~~--t~~~t~a 71 (379)
T TIGR03402 2 YLDNNATTRVDPEVLEAMLPYFTEY--FGNPSSMHSFGGEVGKAVEEAREQVAKLLGAE------PDEIIF--TSGGTES 71 (379)
T ss_pred cCCCcCCCCCCHHHHHHHHHHHHhc--CCCCCcccHHHHHHHHHHHHHHHHHHHHhCCC------CCeEEE--eCcHHHH
Confidence 4566666666889999998876431 12211 123567888888886543 678988 9999999
Q ss_pred HHHHHHHHHHh-CCCCEEEEcCCCCcchHH---HHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCC
Q 012238 164 LRLAAALIERY-FPGAKVLISSPTWGNHKN---IFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAH 239 (467)
Q Consensus 164 l~l~~~~l~~~-~~gd~Vlv~~P~y~~~~~---~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~ 239 (467)
+.++...+... .+||+|++...+|+.+.. .++..|++++.++.+ .++.+|++.+++.++ ++++++++++++
T Consensus 72 ~~~al~~~~~~~~~~~~vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~--~~g~~~~~~l~~~i~---~~~~lv~i~~~~ 146 (379)
T TIGR03402 72 DNTAIKSALAAQPEKRHIITTAVEHPAVLSLCQHLEKQGYKVTYLPVD--EEGRLDLEELRAAIT---DDTALVSVMWAN 146 (379)
T ss_pred HHHHHHHHHHhcCCCCeEEEcccccHHHHHHHHHHHHcCCEEEEEccC--CCCcCCHHHHHHhcC---CCcEEEEEEccc
Confidence 99873332112 356889998888876543 344579999999873 346799999999987 577899999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEe
Q 012238 240 NPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVV 319 (467)
Q Consensus 240 NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v 319 (467)
||||.+++.+ +|.++|+++|+++++|+++. +..-. .+. ....-.+++.|.+|.+|++| +|++++
T Consensus 147 n~tG~~~~~~---~I~~l~~~~g~~vivD~~~~-~g~~~--~~~-------~~~~~D~~~~s~~K~~gp~G--~g~l~v- 210 (379)
T TIGR03402 147 NETGTIFPIE---EIGEIAKERGALFHTDAVQA-VGKIP--IDL-------KEMNIDMLSLSGHKLHGPKG--VGALYI- 210 (379)
T ss_pred CCeeecccHH---HHHHHHHHcCCEEEEECccc-ccccc--cCc-------ccCCCCEEEEcHHHcCCCCc--eEEEEE-
Confidence 9999999976 67777999999999999964 22111 111 11123466778889888777 577752
Q ss_pred cCCHHHHhhhhhhhHHHHH-HHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 012238 320 CSSSDLAARCCEVAVIQVK-SQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAK 398 (467)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~ 398 (467)
.+...... . +. .......+. ..++..+..++..+++ +. .+.++...+++++.++.+.+.|+ +
T Consensus 211 -~~~~~~~p----~---~~g~~~~~~~~~--gt~~~~~~~~l~~al~---~~---~~~~~~~~~~~~~l~~~l~~~l~-~ 273 (379)
T TIGR03402 211 -RKGTRFRP----L---LRGGHQERGRRA--GTENVPGIVGLGKAAE---LA---TEHLEEENTRVRALRDRLEAGLL-A 273 (379)
T ss_pred -CCCCCCCC----c---ccCCccCCCcCC--CCccHHHHHHHHHHHH---HH---HHhHHHHHHHHHHHHHHHHHHHH-h
Confidence 32211110 0 00 000011111 1222222222322231 11 22356667788888888888887 4
Q ss_pred -cCCCCCcccccC-----CcceEEe-cCCCHHHHHHHHHcccEEEeCC-------------------------C--eEEe
Q 012238 399 -DKSGKDWSFILR-----QIGMFSF-TGLNKAQSDNMTNKWHVYMTKD-------------------------G--RISL 444 (467)
Q Consensus 399 -~g~~~~~~~~~~-----~~g~f~~-~~l~~~~~~~ll~~~gI~v~~g-------------------------g--Ris~ 444 (467)
+. + +.+..+ .+.+.+| .+.+.+.+...|+++||.+..| | |+|+
T Consensus 274 ~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~v~~g~~c~~~~~~~~~~~~~lg~~~~~~~~~vR~S~ 350 (379)
T TIGR03402 274 RIP--D-ARLNGDPTKRLPNTVNISFEYIEGEAILLLLDMEGICASSGSACTSGSLEPSHVLRAMGVPHTAAHGSIRFSL 350 (379)
T ss_pred hCC--C-EEEeCCCccCCCCEEEEEecCCCHHHHHHhhccCCEEEEchhhcCCCCCCcCHHHHHcCCChhhcCceEEEEc
Confidence 32 1 233322 1223333 3556666666667789998753 3 9998
Q ss_pred ccC-ChhhHHHHHHHHHHHHHhc
Q 012238 445 AGL-SLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 445 ~~~-~~~~i~~~~~~l~~~l~~~ 466 (467)
+.. +++|+++++++|+++++++
T Consensus 351 ~~~~t~~di~~~~~~l~~~~~~~ 373 (379)
T TIGR03402 351 SRYNTEEDIDYVLEVLPPIIARL 373 (379)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHH
Confidence 764 6699999999999988753
No 162
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.91 E-value=5.7e-22 Score=190.53 Aligned_cols=328 Identities=18% Similarity=0.109 Sum_probs=229.3
Q ss_pred ccCCCCCCCCchHHHHHHHHHHHhcC-----CCCcCC--CCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHH
Q 012238 92 AYRTEELQPYVLDVVKKAENLMLERG-----ENKEYL--PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSL 164 (467)
Q Consensus 92 ~~~d~~~~p~~~~~v~~a~~~~~~~~-----~~~~Y~--~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al 164 (467)
.|+|.+..+++.|.+++++...+... ..+.|+ ....+++.|+.+|+.++.. +++|++ |+|||++.
T Consensus 3 iYlD~~ATTp~~~~v~~~m~~~~~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~llga~------~~eIiF--TSG~TEsn 74 (386)
T COG1104 3 IYLDNAATTPVDPEVLEAMLPYLTEVFGNPSSLHSFGREARKAVEEAREQIAKLLGAD------PEEIIF--TSGATESN 74 (386)
T ss_pred ccccccccCCCCHHHHHHHHHHHHhhcCCccchhHhHHHHHHHHHHHHHHHHHHhCCC------CCeEEE--ecCCcHHH
Confidence 46777777777999999998887432 112332 2345788999999998765 789999 99999999
Q ss_pred HHHHHHHH--HhC----CCCEEEEcCCCCcchHHHHhhC---CCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEe
Q 012238 165 RLAAALIE--RYF----PGAKVLISSPTWGNHKNIFNDA---RVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLH 235 (467)
Q Consensus 165 ~l~~~~l~--~~~----~gd~Vlv~~P~y~~~~~~~~~~---G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i 235 (467)
+++ +.. ... .|.+|+++.-.++...+.++.+ |+++.++|+ +.++.+|++.|+++++ +++.+|.+
T Consensus 75 Nla--I~g~~~a~~~~~~~~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V--~~~G~v~~e~L~~al~---~~T~LVSi 147 (386)
T COG1104 75 NLA--IKGAALAYRNAQKGKHIITSAIEHPAVLNTCRYLERQGFEVTYLPV--DSNGLVDLEQLEEALR---PDTILVSI 147 (386)
T ss_pred HHH--HHhhHHhhhcccCCCeEEEcccccHHHHHHHHHHHhcCCeEEEeCC--CCCCeEcHHHHHHhcC---CCceEEEE
Confidence 998 333 222 4779999998888877777655 999999998 4477899999999999 68999999
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccce
Q 012238 236 GCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGA 315 (467)
Q Consensus 236 ~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~ 315 (467)
...||-||++.|.+ +|.++|+++++++.+|.+ |.+.- .+.+. ....-.+...|-.|.+|+.| +|.
T Consensus 148 m~aNnE~G~IQpI~---ei~~i~k~~~i~fHvDAv-Qa~Gk--ipi~~-------~~~~vD~ls~SaHK~~GpkG--iGa 212 (386)
T COG1104 148 MHANNETGTIQPIA---EIGEICKERGILFHVDAV-QAVGK--IPIDL-------EELGVDLLSFSAHKFGGPKG--IGA 212 (386)
T ss_pred EecccCeeecccHH---HHHHHHHHcCCeEEEehh-hhcCc--eeccc-------cccCcceEEeehhhccCCCc--eEE
Confidence 99999999998877 566669999999999999 55432 21111 11123567888899999988 688
Q ss_pred EEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 012238 316 MNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSL 395 (467)
Q Consensus 316 ~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l 395 (467)
+++ .+.--... +..-.. -.+-.+..+.+.+.+.... .+++.. .++++....++++.|++|.+.|
T Consensus 213 Lyv--~~~~~~~p-----~i~GGg-QE~g~RsGTenv~~Ivg~~--~A~~~a------~~~~~~~~~~~~~lr~~l~~~l 276 (386)
T COG1104 213 LYV--RPGVRLEP-----LIHGGG-QERGLRSGTENVPGIVGFG--KAAEIA------VEELEEENARLRKLRDRLEDGL 276 (386)
T ss_pred EEE--CCCCccCc-----eeccCc-CCCCCCCCCccHHHHHHHH--HHHHHH------HHHHHHHHHHHHHHHHHHHHHH
Confidence 862 22111111 000000 0111233344555544222 222211 3446677888999999999999
Q ss_pred hhcc-CC---CCCcccccCCcceEEecCCCHHHHHHHHHcccEEEeCC-----------------C----------eEEe
Q 012238 396 SAKD-KS---GKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKD-----------------G----------RISL 444 (467)
Q Consensus 396 ~~~~-g~---~~~~~~~~~~~g~f~~~~l~~~~~~~ll~~~gI~v~~g-----------------g----------Ris~ 444 (467)
. +. +. .+.-....|..-.|.|.++..|.+...|+.+||++..| | ||||
T Consensus 277 ~-~~~p~~~~~g~~~~rlP~~~~~~f~gv~gE~ll~~L~~~gI~vStGSACsS~~~~pShVL~AmG~~~e~a~~siR~S~ 355 (386)
T COG1104 277 L-EIIPDVYLNGDDEPRLPNILNFSFPGVEGESLLLALDLAGIAVSTGSACSSGSLEPSHVLRAMGISEELAHGSIRFSL 355 (386)
T ss_pred H-hcCCcEEEcCCcccCCCCeEEEEeCCCcHHHHHHhccccCeEEeccccccCCCCCccHHHHHcCCChHHhCccEEEEc
Confidence 8 54 11 01112234444556777889999888888889999887 1 9999
Q ss_pred ccC-ChhhHHHHHHHHHHHHHhc
Q 012238 445 AGL-SLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 445 ~~~-~~~~i~~~~~~l~~~l~~~ 466 (467)
+.. ++++++++++.++++++++
T Consensus 356 g~~tt~eei~~~~~~l~~~i~~l 378 (386)
T COG1104 356 GRFTTEEEIDAAAEALKEIIKRL 378 (386)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHH
Confidence 876 5589999999999999875
No 163
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.90 E-value=1.3e-21 Score=195.17 Aligned_cols=323 Identities=14% Similarity=0.048 Sum_probs=202.3
Q ss_pred CCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCE
Q 012238 100 PYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAK 179 (467)
Q Consensus 100 p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~ 179 (467)
..+.+.|++++.... ......| ..-..++|+.++++++... +++.|++ |.|||++++.+ +...+.+||+
T Consensus 12 ~~~~~~v~~~~~~~~-~~~~~~~--~~~~~~~r~~la~l~~~~~----~~~~i~~--t~~~t~al~~~--~~~l~~~~~~ 80 (363)
T TIGR02326 12 LTTSRTVKEAMLFDW-CTWDSDY--NIVVEQIRQQLLALATAEE----GYTSVLL--QGSGTFAVEAV--IGSAVPKDGK 80 (363)
T ss_pred CCCCHHHHHHhCCCC-CCCChHH--HHHHHHHHHHHHHHhCCCC----CceEEEE--cCCCHHHHHHH--HHhcCCCCCe
Confidence 344677777664432 1111111 1235678888998875531 0236888 99999999997 4445668888
Q ss_pred EEEcCCCCcch--HHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHH
Q 012238 180 VLISSPTWGNH--KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADV 257 (467)
Q Consensus 180 Vlv~~P~y~~~--~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~ 257 (467)
|++..+++... ...++..|++++.+++ +.++.+|++.+++.++.. .+.+++.+++++||||..++. ++|+++
T Consensus 81 vlv~~~~~~~~~~~~~a~~~g~~~~~v~~--~~~~~~d~~~l~~~l~~~-~~~~~v~~~~~~~~tG~~~~i---~~I~~l 154 (363)
T TIGR02326 81 LLVVINGAYGARIVQIAEYLGIPHHVVDT--GEVEPPDVVEVEAILAAD-PAITHIALVHCETTTGILNPI---EAVAKL 154 (363)
T ss_pred EEEEeCChhhHHHHHHHHHcCCceEEEeC--CCCCCCCHHHHHHHHhhC-CCccEEEEEeecCCccccCcH---HHHHHH
Confidence 88877666544 4667889999999998 345679999999998753 345577788899999999986 477888
Q ss_pred HHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCc-ccCCCccceEEEecCCHHHHhhhhhhh---
Q 012238 258 IQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL-GLYAERIGAMNVVCSSSDLAARCCEVA--- 333 (467)
Q Consensus 258 ~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-~~~G~RiG~~~~v~~~~~~~~~~~~~~--- 333 (467)
|+++|+++|+|+++ .+.... . .+ .+. +..+++.|++|.+ +++| +||++ .+++.++. +...
T Consensus 155 ~~~~g~~livD~~~-~~g~~~--~---~~---~~~-~~D~~~~s~~K~l~~p~G--~G~l~---~~~~~~~~-~~~~~~~ 218 (363)
T TIGR02326 155 AHRHGKVTIVDAMS-SFGGIP--I---DI---AEL-HIDYLISSANKCIQGVPG--FGFVI---ARQAELAA-CKGNARS 218 (363)
T ss_pred HHHcCCEEEEEccc-cccCcc--c---ch---hhc-CccEEEecCccccccCCc--ceEEE---ECHHHHHH-hhcCCCc
Confidence 99999999999874 343211 1 11 111 2347788999976 5567 69996 55655554 0000
Q ss_pred -HHHHHHHHHhh---ccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccccc
Q 012238 334 -VIQVKSQLKRL---ARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFIL 409 (467)
Q Consensus 334 -~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~ 409 (467)
+.++..+.... .......++...+.++..++.. +.. +..+++..++++++++++.+.|+ ++|+ ....
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~ft~~~~~~~al~~al~~--l~~--~g~~~~~~~~~~~~~~~l~~~L~-~~g~----~~~~ 289 (363)
T TIGR02326 219 LSLDLYDQWRCMEDNHGKWRFTSPTHVVHAFAQALLE--LEK--EGGVAARHQRYQQNQKTLVAGMR-ALGF----EPLL 289 (363)
T ss_pred eeecHHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHH--HHH--hhCHHHHHHHHHHHHHHHHHHHH-HcCC----eecc
Confidence 00000001101 0011113444455554444421 111 01255678899999999999998 8774 3332
Q ss_pred C---CcceEE---ecC---CCHHHHHHHHHcccEEEeCCC-------eEEe-ccCChhhHHHHHHHHHHHHH
Q 012238 410 R---QIGMFS---FTG---LNKAQSDNMTNKWHVYMTKDG-------RISL-AGLSLAKCEYLADAIIDSYH 464 (467)
Q Consensus 410 ~---~~g~f~---~~~---l~~~~~~~ll~~~gI~v~~gg-------Ris~-~~~~~~~i~~~~~~l~~~l~ 464 (467)
+ ..+... +.. ++...+.+.++++||.+.+|. ||++ +..+.+++++++++|++++.
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~L~~~gi~v~~g~~~~~~~iRi~~~~~~~~edv~~~l~~l~~~l~ 361 (363)
T TIGR02326 290 DDEIQSPIITSFYSPEDPDYRFADFYQRLKEQGFVIYPGKVSQVDCFRIGNIGEVDAADITRLLTAIGKAMY 361 (363)
T ss_pred CcccCCceEEEEECCCCCCCCHHHHHHHHHHCCEEEECCcCCCCCEEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence 2 233222 222 233444444556699999882 9985 65588999999999999875
No 164
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.90 E-value=2.4e-21 Score=194.65 Aligned_cols=166 Identities=16% Similarity=0.144 Sum_probs=131.5
Q ss_pred CCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHH----HhhCCC
Q 012238 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI----FNDARV 199 (467)
Q Consensus 124 ~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~----~~~~G~ 199 (467)
+..+..+|++++|++... +++++ ++||++|+.++ +...+.+||+|+++.|.|..+... ++..|+
T Consensus 62 ~~p~~~~Le~~iA~~~g~--------~~~l~--~~sG~~Ai~~a--l~~ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~ 129 (400)
T PRK06234 62 GNPTSTEVENKLALLEGG--------EAAVV--AASGMGAISSS--LWSALKAGDHVVASDTLYGCTFALLNHGLTRYGV 129 (400)
T ss_pred CCccHHHHHHHHHHHhCC--------CcEEE--EcCHHHHHHHH--HHHHhCCCCEEEEecCccchHHHHHHHHHhhCCe
Confidence 778899999999999653 24555 79999999887 555678999999999999765543 467899
Q ss_pred CeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhc--CCeeEEeccCCCCCCC
Q 012238 200 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEK--NHIPFFDVAYQGFASG 277 (467)
Q Consensus 200 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~--~~~li~Deay~~~~~~ 277 (467)
+++.++. .|++++++.++ ++++++++++|+||||.+.+.+ +|+++|+++ |+++|+|++|......
T Consensus 130 ~v~~vd~-------~d~e~l~~~i~---~~tklI~iesP~NPtG~v~dl~---~I~~la~~~~~~i~livDea~~~~~~~ 196 (400)
T PRK06234 130 EVTFVDT-------SNLEEVRNALK---ANTKVVYLETPANPTLKVTDIK---AISNIAHENNKECLVFVDNTFCTPYIQ 196 (400)
T ss_pred EEEEECC-------CCHHHHHHHhc---cCCeEEEEECCCCCCCCcCCHH---HHHHHHHhcCCCCEEEEECCCCchhcC
Confidence 8888865 37899999887 5788999999999999998854 666678886 9999999998866543
Q ss_pred CCCCChhHHHHHHhcCCeEEEEecCccCcccCCCcc-ceEEEecCCHHHHhh
Q 012238 278 SLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERI-GAMNVVCSSSDLAAR 328 (467)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~Ri-G~~~~v~~~~~~~~~ 328 (467)
. ++ .. ...+++.|+||.++.+|+|+ ||++ .++++++.
T Consensus 197 ~------~l----~~-g~Divv~S~sK~l~g~g~~~gG~v~---~~~~~~~~ 234 (400)
T PRK06234 197 R------PL----QL-GADVVVHSATKYLNGHGDVIAGFVV---GKEEFINQ 234 (400)
T ss_pred C------ch----hh-CCcEEEeeccccccCCCCceeEEEE---ecHHHHHH
Confidence 1 11 11 34589999999999999987 8874 67777776
No 165
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.90 E-value=4.3e-21 Score=193.43 Aligned_cols=326 Identities=11% Similarity=0.099 Sum_probs=207.4
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCC-CcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCc
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGEN-KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 160 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~-~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~gg 160 (467)
+.+.+|+..|..-..-| +-.|.|.+++.+.++.... ..+....-..+|.+.++++. + .+.+++ +++|
T Consensus 39 G~~~lD~~~g~~~~~lG--h~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~----~----~~~~~~--~~SG 106 (396)
T PRK04073 39 GNRYMDMLSAYSAVNQG--HRHPKIIQALKDQADKVTLTSRAFHSDQLGPWYEKVAKLT----G----KDMVLP--MNTG 106 (396)
T ss_pred CCEEEEcCCCHHhccCC--CCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhcC----C----CCeEEE--cCCh
Confidence 45789998774411112 2367888888887754211 11112233345555566542 1 247888 8999
Q ss_pred hhHHHHHHHHHHHh-------CCC-CEEEEcCCCCcchH-HHHhhCCCC------------eEEeeeecCCCCCCChhhH
Q 012238 161 TGSLRLAAALIERY-------FPG-AKVLISSPTWGNHK-NIFNDARVP------------WSEYRYYDPKTVGLDFEGM 219 (467)
Q Consensus 161 t~al~l~~~~l~~~-------~~g-d~Vlv~~P~y~~~~-~~~~~~G~~------------~~~v~~~~~~~~~~d~~~l 219 (467)
++|++.+..+.... .+| ++|+...-+|.... ..+...+.. +..++. .|++.+
T Consensus 107 seA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l 179 (396)
T PRK04073 107 AEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPY-------GDLEAL 179 (396)
T ss_pred HHHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeCC-------CCHHHH
Confidence 99999985554332 134 67888887776543 333322211 111221 378888
Q ss_pred HHHHHcCCCCcEEEEeCCCCCCCCCCCCHH-HHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEE
Q 012238 220 IADIKAAPGGSFILLHGCAHNPTGIDPTPE-QWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV 298 (467)
Q Consensus 220 ~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~-~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~ 298 (467)
++.+. ++++++++++++||||.+++.+ .+++|.++|++||+++|+||+|.++...+ ..+.. ......+++
T Consensus 180 ~~~i~---~~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g---~~~~~-~~~~~~pdi-- 250 (396)
T PRK04073 180 KAAIT---PNTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTG---KLFAC-DWDNVTPDM-- 250 (396)
T ss_pred HHhcc---cCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCc---HHHHh-hhcCCCCCE--
Confidence 88886 5678999999999999998764 69999999999999999999999876432 11111 111222333
Q ss_pred EecCccCcccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHH
Q 012238 299 AQSYSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEME 378 (467)
Q Consensus 299 ~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~ 378 (467)
.+|||.+|.+|+|+||++ +++++++. +.........+.+.+++.++...|+.. ++ +
T Consensus 251 -~~~sK~lg~gg~~ig~~~---~~~~i~~~------------~~~~~~~~t~~~~~~~~aaa~aaL~~~------~~--~ 306 (396)
T PRK04073 251 -YILGKALGGGVFPISCVA---ANRDILGV------------FTPGSHGSTFGGNPLACAVSIAALEVL------EE--E 306 (396)
T ss_pred -EEecccccCCCCcceEEE---EcHHHHhh------------hcCCCCCCCCCCCHHHHHHHHHHHHHH------Hh--c
Confidence 357999998889999995 77877776 543333334456777777777766421 00 1
Q ss_pred HHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceEEecCC---CHHHHHHHHHcccEEEeCCC----eEEec-cCChh
Q 012238 379 MMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL---NKAQSDNMTNKWHVYMTKDG----RISLA-GLSLA 450 (467)
Q Consensus 379 ~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~~~g~f~~~~l---~~~~~~~ll~~~gI~v~~gg----Ris~~-~~~~~ 450 (467)
...++.+++++++.+.|+ +++.+. +....+. |.|+++.+ ..++.+++++ +||.+.+.+ ||+.. ..+++
T Consensus 307 ~l~~~~~~~~~~l~~~L~-~l~~~~-i~~~~~~-g~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~~~~~iRi~p~l~~t~e 382 (396)
T PRK04073 307 KLPERSLELGEYFKEQLK-EIDNPM-IKEVRGR-GLFIGVELNEPARPYCEALKE-EGLLCKETHETVIRFAPPLVITKE 382 (396)
T ss_pred CHHHHHHHHHHHHHHHHH-hhcCCc-ccceecc-eEEEEEEecchHHHHHHHHHH-CCeEEecCCCCEEEEECCcccCHH
Confidence 344566677888899888 764321 3333445 45566544 2345666655 699998754 88842 23889
Q ss_pred hHHHHHHHHHHHH
Q 012238 451 KCEYLADAIIDSY 463 (467)
Q Consensus 451 ~i~~~~~~l~~~l 463 (467)
++++++++|++++
T Consensus 383 ~i~~~~~~l~~~l 395 (396)
T PRK04073 383 ELDWAFEKIKAVL 395 (396)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999999875
No 166
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.90 E-value=1.6e-20 Score=190.01 Aligned_cols=327 Identities=15% Similarity=0.093 Sum_probs=209.4
Q ss_pred CCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCC------CcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeee
Q 012238 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGEN------KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQ 156 (467)
Q Consensus 83 ~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~------~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~ 156 (467)
.+.++|+...|. +... .|.|++++.+.++.... ..+....-..+|++.+++++.. +..++
T Consensus 45 ~~~~~~~sn~yl---gl~~-~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~--------~~~~~-- 110 (406)
T PRK13393 45 REVTVWCSNDYL---GMGQ-HPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLHGK--------EAALL-- 110 (406)
T ss_pred ccEEEeeccccc---CCCC-CHHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHhCC--------CcEEE--
Confidence 468999988774 3333 67788888887753110 1111222457888899998642 24444
Q ss_pred cCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcC-CCCcEEEEe
Q 012238 157 GLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA-PGGSFILLH 235 (467)
Q Consensus 157 t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~-~~~~~~i~i 235 (467)
.++|+++...+...+....+||.|+.....|......++..|.+++.++. .|++.+++.++.. +++++++++
T Consensus 111 ~~SG~~An~~ai~~l~~~~~g~~I~~~~~~H~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~v~~ 183 (406)
T PRK13393 111 FTSGYVSNWAALSTLGSRLPGCVILSDELNHASMIEGIRHSRAEKRIFRH-------NDPADLERKLSDLDPHRPKLVAF 183 (406)
T ss_pred eCCcHHHHHHHHHHhhcCCCCCEEEEccchhHHHHHHHHHcCCeEEEeCC-------CCHHHHHHHHHhccCCCCEEEEE
Confidence 46667777776332222237787777677777777777888887766653 4777888877643 235678899
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCC-eEEEEecCccCcccCCCccc
Q 012238 236 GCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGM-ELLVAQSYSKNLGLYAERIG 314 (467)
Q Consensus 236 ~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~S~SK~~~~~G~RiG 314 (467)
++++||+|.+.+ +++|.++|+++|+++|+||+|....++... ... . ......+ .+++++||||.+|++| |
T Consensus 184 ~~v~~~~G~~~~---l~~i~~l~~~~~~~livDea~~~g~~g~~G-~g~-~-~~~~~~~~~~i~~~tlsKa~g~~G---G 254 (406)
T PRK13393 184 ESVYSMDGDIAP---IAEICDVAEKHGAMTYLDEVHAVGLYGPRG-GGI-A-EREGLADRLTIIEGTLAKAFGVMG---G 254 (406)
T ss_pred cCCCCCCCchhC---HHHHHHHHHHcCCEEEEECCccccccCCCC-Cch-h-hhcCCCCCCeEEEEeCchhhcccC---c
Confidence 999999999988 556777799999999999998633333211 111 1 1111112 3677899999999888 8
Q ss_pred eEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCc--cCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 012238 315 AMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPM--YSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLF 392 (467)
Q Consensus 315 ~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~ 392 (467)
|++ +++++++. +......+ ..+.+...+.++..+|+.. ++. ...+++++++++++.
T Consensus 255 ~~~---~~~~~~~~------------l~~~~~~~~~t~~~~p~~~aa~~aaL~~~------~~~-~~~~~~~~~~~~~l~ 312 (406)
T PRK13393 255 YIT---GSAALCDF------------IRSFASGFIFTTSLPPAVAAGALASVRHL------KAS-SAERERHQDRVARLR 312 (406)
T ss_pred eee---CCHHHHHH------------HHHhCcCceecCccCHHHHHHHHHHHHHH------hhC-HHHHHHHHHHHHHHH
Confidence 884 78887776 55444332 2334444455555555321 111 123456778889999
Q ss_pred HHhhhccCCCCCcccccCCcceEEe-cCC---CHHHHHHHHHcccEEEeC--------C-C--eEEecc-CChhhHHHHH
Q 012238 393 DSLSAKDKSGKDWSFILRQIGMFSF-TGL---NKAQSDNMTNKWHVYMTK--------D-G--RISLAG-LSLAKCEYLA 456 (467)
Q Consensus 393 ~~l~~~~g~~~~~~~~~~~~g~f~~-~~l---~~~~~~~ll~~~gI~v~~--------g-g--Ris~~~-~~~~~i~~~~ 456 (467)
+.|+ ++| ++...+.+.++.+ .+- ..++.+++++++||.+.+ | + ||++.. .+++++++++
T Consensus 313 ~~L~-~~g----~~~~~~~~~i~~v~~~~~~~~~~l~~~L~~~~Gi~v~~~~~p~~p~g~~~iRis~~~~~t~edid~l~ 387 (406)
T PRK13393 313 ARLD-KAG----IPHLPNPSHIVPVMVGDPVLCKQISDELLDRYGIYVQPINYPTVPRGTERLRITPSPLHTDADIEHLV 387 (406)
T ss_pred HHHH-HcC----CCcCCCCCCeEEEEeCCHHHHHHHHHHHHHhCCEEEEeECCCCCCCCCceEEEEECCCCCHHHHHHHH
Confidence 9998 776 4555666665432 221 123455666657999865 2 2 888753 3789999999
Q ss_pred HHHHHHHHhc
Q 012238 457 DAIIDSYHNV 466 (467)
Q Consensus 457 ~~l~~~l~~~ 466 (467)
++|+++++++
T Consensus 388 ~~l~~~~~~~ 397 (406)
T PRK13393 388 QALSEIWARL 397 (406)
T ss_pred HHHHHHHHhc
Confidence 9999987653
No 167
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.90 E-value=3.3e-21 Score=195.76 Aligned_cols=342 Identities=8% Similarity=0.022 Sum_probs=214.9
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCch
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (467)
+...+|+..|..-..-| +-+|.+.+++.+.++... +.+.+..+.+.. ..+++++....+... .+++++ +.+|+
T Consensus 40 G~~~lD~~~g~~~~~lG--h~~~~i~~a~~~~~~~~~-~~~~~~~~~~~~-~~la~~l~~~~~~~~-~~~~~f--~~sGs 112 (425)
T PRK08088 40 GREYLDFAGGIAVLNTG--HLHPKVVAAVEAQLKKLS-HTCFQVLAYEPY-LELCEKMNQKVPGDF-AKKTLL--VTTGS 112 (425)
T ss_pred CCEEEEcCCchhhcCCC--CCCHHHHHHHHHHHhhCC-CccccccCCHHH-HHHHHHHHHhCCCCC-CCEEEE--eCCcH
Confidence 45789998875411112 236788888888876432 222222223333 356666654333222 246777 78888
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeE--------------E--eeeecCCCCCCC----hhhHHH
Q 012238 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWS--------------E--YRYYDPKTVGLD----FEGMIA 221 (467)
Q Consensus 162 ~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~--------------~--v~~~~~~~~~~d----~~~l~~ 221 (467)
+|.+.+..+...+....+|+..+++|.+....+...+.... . +|.+ .. +.+ ++.+++
T Consensus 113 ea~e~Alklar~~~~r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~-~~~~~~~~~~l~~ 189 (425)
T PRK08088 113 EAVENAVKIARAATKRSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCP--LH-GVSEDDAIASIER 189 (425)
T ss_pred HHHHHHHHHHHHHhCCCeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCcc--cc-CccHHHHHHHHHH
Confidence 98888866654554556788889999877655444333211 1 1111 11 122 456777
Q ss_pred HHHc--C-CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEE
Q 012238 222 DIKA--A-PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV 298 (467)
Q Consensus 222 ~l~~--~-~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~ 298 (467)
.++. . ..-..+++-+..+|+++..++.+.+++|.++|++||+++|+||+|.++...+ ..+.. +....+.-
T Consensus 190 ~l~~~~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~g---~~~~~----~~~~~~pd 262 (425)
T PRK08088 190 IFKNDAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRTG---TLFAM----EQMGVAAD 262 (425)
T ss_pred HHHhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCc---chhHH----hhcCCCCC
Confidence 7752 1 2334555656678888888999999999999999999999999999875432 11111 11122344
Q ss_pred EecCccCcccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHH
Q 012238 299 AQSYSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEME 378 (467)
Q Consensus 299 ~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~ 378 (467)
+.||||.++ +|+|+||++ +++++++. +.......+.+.+.+.|.++..+|+.... ++.++
T Consensus 263 i~s~sK~l~-~G~rig~v~---~~~~~~~~------------~~~~~~~~t~~~~~~~~~a~~~~l~~~~~----~~~~~ 322 (425)
T PRK08088 263 LTTFAKSIA-GGFPLAGVT---GRAEVMDA------------IAPGGLGGTYAGNPIACAAALAVLKVFEQ----ENLLQ 322 (425)
T ss_pred EEEEecccc-CCCcceeeE---ecHHHHhh------------cCCCCCCCCCCcCHHHHHHHHHHHHHHHh----cCHHH
Confidence 789999999 999999996 78888777 54444444556777888888888864322 23345
Q ss_pred HHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceEEecCC-------------CHHHHHHHHHcccEEEeCCC-----
Q 012238 379 MMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL-------------NKAQSDNMTNKWHVYMTKDG----- 440 (467)
Q Consensus 379 ~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~~~g~f~~~~l-------------~~~~~~~ll~~~gI~v~~gg----- 440 (467)
..++..++.++.+.+.+. ..+. +...... |+++|+.+ ..++.+.+++ .||.+.+++
T Consensus 323 ~~~~~~~~~~~~l~~l~~-~~~~---~~~v~g~-G~~~~l~l~~~~~~~~p~~~~~~~l~~~~~~-~Gv~~~~~~~~~~~ 396 (425)
T PRK08088 323 KANALGEKLKDGLLAIAE-KHPE---IGDVRGL-GAMIAIELFEDGDHSKPNAKLTAQIVARARD-KGLILLSCGPYYNV 396 (425)
T ss_pred HHHHHHHHHHHHHHHHHH-hCCC---eEEEecc-ceEEEEEEecCCCCCCCCHHHHHHHHHHHHh-CCCEEecCCCCCCE
Confidence 555555555555554444 4432 2222223 77888754 1233445555 598887753
Q ss_pred -eEEec-cCChhhHHHHHHHHHHHHHhc
Q 012238 441 -RISLA-GLSLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 441 -Ris~~-~~~~~~i~~~~~~l~~~l~~~ 466 (467)
||+++ ..+++++++++++|.+++..+
T Consensus 397 iRl~~~~~~t~~ei~~~i~~l~~~l~~~ 424 (425)
T PRK08088 397 LRILVPLTIEDAQIRQGLEIIAQCFDEA 424 (425)
T ss_pred EEEECCCCcCHHHHHHHHHHHHHHHHhh
Confidence 99998 457899999999999999865
No 168
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.90 E-value=1.5e-20 Score=187.34 Aligned_cols=331 Identities=17% Similarity=0.146 Sum_probs=221.7
Q ss_pred CCCCCCCchHHHHHHHHHHHhc---C-CCCcCCC----CcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHH
Q 012238 95 TEELQPYVLDVVKKAENLMLER---G-ENKEYLP----IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRL 166 (467)
Q Consensus 95 d~~~~p~~~~~v~~a~~~~~~~---~-~~~~Y~~----~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l 166 (467)
|.......|..|.+++.+.... + ....|.. ..-+++.|+.+|++++... .++|++ |.|+|+++++
T Consensus 27 D~aa~~~~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~-----~~eIvf--t~~tT~aln~ 99 (405)
T COG0520 27 DNAATSQKPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNADS-----SDEIVF--TRGTTEALNL 99 (405)
T ss_pred cCcccccCCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhCCCC-----CCeEEE--eCChhHHHHH
Confidence 3334445688899998887631 1 1112221 2357889999999987651 378999 9999999999
Q ss_pred HHHHHHH-hCCCCEEEEcCCCCc----chHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCC
Q 012238 167 AAALIER-YFPGAKVLISSPTWG----NHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 241 (467)
Q Consensus 167 ~~~~l~~-~~~gd~Vlv~~P~y~----~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NP 241 (467)
++..+.. +.+||+|++..-.|+ ++....+..|++++.+|++ +++.+|.+.++..+. ++|+++.++..+|-
T Consensus 100 va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~--~~g~~~~~~~~~~i~---~~Tklvais~vSn~ 174 (405)
T COG0520 100 VARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLD--DDGLLDLDALEKLIT---PKTKLVALSHVSNV 174 (405)
T ss_pred HHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEecC--CCCCcCHHHHHHhcC---CCceEEEEECcccc
Confidence 8554433 578999999998775 4556667789999999984 567899999999777 78999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCcc-CcccCCCccceEEEec
Q 012238 242 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSK-NLGLYAERIGAMNVVC 320 (467)
Q Consensus 242 TG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK-~~~~~G~RiG~~~~v~ 320 (467)
||++.+.+ +|+++|+++|.++++|.+ |.......+. +..+-.+++.|-.| .+|+.| +|.++
T Consensus 175 tG~~~pv~---~I~~la~~~ga~v~VDaa-q~~~h~~idv---------~~l~~Df~afsgHKwl~gP~G--iGvLy--- 236 (405)
T COG0520 175 TGTVNPVK---EIAELAHEHGALVLVDAA-QAAGHLPIDV---------QELGCDFLAFSGHKWLLGPTG--IGVLY--- 236 (405)
T ss_pred ccccchHH---HHHHHHHHcCCEEEEECc-cccCccCCCc---------hhcCCCEEEEcccccccCCCc--eEEEE---
Confidence 99988855 777779999999999999 5554433222 22245688999999 888667 58886
Q ss_pred CCHHHHhhhhhh----hHHHHHH-----HHHhhccCccCCCchHHHHHH-HHHhCChhhHHHHHHHHHHHHHHHHHHHHH
Q 012238 321 SSSDLAARCCEV----AVIQVKS-----QLKRLARPMYSNPPVHGARIV-ANVVGNPALFDEWKAEMEMMAGRIKNVRQK 390 (467)
Q Consensus 321 ~~~~~~~~~~~~----~~~~~~~-----~l~~~~~~~~~~~~~~~~~~~-~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~ 390 (467)
..+++.+.-.+. +.....+ .++..-...-.+.+.+.+.+. ..++ .+.+ +-.++++.++.++..++
T Consensus 237 ~r~~~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl---~~~~--~ig~~~i~~~e~~L~~~ 311 (405)
T COG0520 237 VRKELLEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAAL---DYLL--EIGMEAIEAHERELTEY 311 (405)
T ss_pred EchHHHhhcCCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHH---HHHH--HHhHHHHHHHHHHHHHH
Confidence 566666550000 0000000 000000001122333333332 2222 1111 12256788888888999
Q ss_pred HHHHhhhccCCCCCcccccC----CcceEEec--CCCHHHHHHHHHcccEEEeCCC----------------eEEeccC-
Q 012238 391 LFDSLSAKDKSGKDWSFILR----QIGMFSFT--GLNKAQSDNMTNKWHVYMTKDG----------------RISLAGL- 447 (467)
Q Consensus 391 l~~~l~~~~g~~~~~~~~~~----~~g~f~~~--~l~~~~~~~ll~~~gI~v~~gg----------------Ris~~~~- 447 (467)
+.+.|+ ++.. ++++.+ .++.+.|. +.....+...|.++||.++.|. |+|++.+
T Consensus 312 ~~~~L~-~~~~---v~i~g~~~~~r~~~vsF~v~~~~~~dv~~~L~~~gI~vr~g~~ca~p~~~~~~~~~~iR~S~~~YN 387 (405)
T COG0520 312 LLEGLS-ELPG---VEIYGPPDADRGGIVSFNVKGIHPHDVATLLDEKGIAVRAGHHCAQPLHRLLGVDATIRASLHLYN 387 (405)
T ss_pred HHHHHh-cCCC---eEEecCCcccCceEEEEEeCCCCHHHHHHHHHhCCeEEEeccccccHHHHhcCCCCceEEEEeecC
Confidence 999998 6542 455544 35655543 6667776666777799998881 9998766
Q ss_pred ChhhHHHHHHHHHHHHH
Q 012238 448 SLAKCEYLADAIIDSYH 464 (467)
Q Consensus 448 ~~~~i~~~~~~l~~~l~ 464 (467)
+++|+++++++|+++.+
T Consensus 388 t~edid~l~~aL~~~~~ 404 (405)
T COG0520 388 TEEDVDRLLEALKKALA 404 (405)
T ss_pred CHHHHHHHHHHHHHHhh
Confidence 66999999999998764
No 169
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.90 E-value=7.8e-21 Score=188.81 Aligned_cols=310 Identities=15% Similarity=0.090 Sum_probs=196.1
Q ss_pred CcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhH
Q 012238 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 163 (467)
Q Consensus 84 ~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a 163 (467)
.+||-+--. +.-+..++++.+.+++.+..+. |. +.+++++++.+++...+| .+++++ |+|+|.|
T Consensus 9 ~~ina~g~~--t~~g~s~~~~~v~~a~~~~~~~-----~~---~~~~~~~~~~~~~a~~~g----~~~~~~--~~g~t~a 72 (363)
T TIGR01437 9 KVINASGKM--TILGVSTVSDEVADAQKRGAQN-----YF---EIKELVNKTGEYIANLLG----VEDAVI--VSSASAG 72 (363)
T ss_pred eEEECCcEe--ecCCCCCCCHHHHHHHHHHHhc-----CC---CHHHHHHHHHHHHHHhhC----CCeEEE--EcCHHHH
Confidence 456654222 2334445689999999988642 32 234455555555433333 246777 9999999
Q ss_pred HHHHHHHHHHhCCCC---------------EEEEcCCCCcch----HHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHH
Q 012238 164 LRLAAALIERYFPGA---------------KVLISSPTWGNH----KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIK 224 (467)
Q Consensus 164 l~l~~~~l~~~~~gd---------------~Vlv~~P~y~~~----~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~ 224 (467)
+.++ +...+.+|| +|+++.|.|..| ...+...|+++++++. ++.+|++.++++++
T Consensus 73 l~~a--l~al~~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~----~~~~d~~~le~ai~ 146 (363)
T TIGR01437 73 IAQS--VAAVITRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEAGY----ANECSAEQLEAAIT 146 (363)
T ss_pred HHHH--HHHHhcCCCcchhhcccccccccceEEEECccchhcCCchHHHHHhcCCeEEEEcC----CCCCCHHHHHHhcC
Confidence 9998 555677887 999999888766 5677889999999876 24599999999997
Q ss_pred cCCCCcEEEE-eCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCc
Q 012238 225 AAPGGSFILL-HGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYS 303 (467)
Q Consensus 225 ~~~~~~~~i~-i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~S 303 (467)
+++++++ +++|+||+|.+.+.+ +|+++|++||+++|+|++|.. . .. .....+ ..+++.|++
T Consensus 147 ---~~t~ai~~v~~~~~~~g~~~~~~---~i~~~a~~~gi~vivD~a~~~---~-----~~---~~~~~g-~D~~~~S~~ 208 (363)
T TIGR01437 147 ---EKTAAILYIKSHHCVQKSMLSVE---DAAQVAQEHNLPLIVDAAAEE---D-----LQ---KYYRLG-ADLVIYSGA 208 (363)
T ss_pred ---hhceEEEEEecCCCCcCCcCCHH---HHHHHHHHcCCeEEEECCCCC---c-----hH---HHHHcC-CCEEEEeCC
Confidence 4555444 678999999998876 567779999999999999751 1 11 111222 357789999
Q ss_pred cCcccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCcc----C-CCchHHHHHHHHHhCChhhHHHHHHHHH
Q 012238 304 KNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMY----S-NPPVHGARIVANVVGNPALFDEWKAEME 378 (467)
Q Consensus 304 K~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~----~-~~~~~~~~~~~~~L~~~~~~~~~~~~l~ 378 (467)
|.+ +|++.|+++ .++++++. ++....... . ..+..+..++...+. +.-.
T Consensus 209 K~l--~gp~~G~l~---~~~~~i~~------------~~~~~~~~~~~~~~~~~~~~gl~aAl~~~~---------~~~~ 262 (363)
T TIGR01437 209 KAI--EGPTSGLVL---GKKKYIEW------------VKLQSKGIGRAMKVGKENILGLTAALEQYL---------STGK 262 (363)
T ss_pred ccc--CCCceEEEE---EcHHHHHH------------HHhccCCCcceeccCHHHHHHHHHHHHHHH---------ccCc
Confidence 976 688899985 67767665 322111100 0 011122222222221 1112
Q ss_pred HHHHHHHHHHHHHHHHhhhccCCCCCcccccC--Ccce--E---E-ec----CCCHHHHHHHHHccc--EEEeC----CC
Q 012238 379 MMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR--QIGM--F---S-FT----GLNKAQSDNMTNKWH--VYMTK----DG 440 (467)
Q Consensus 379 ~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~--~~g~--f---~-~~----~l~~~~~~~ll~~~g--I~v~~----gg 440 (467)
+..+.+.++++.+.+.|. +++ + +....+ ..+. + + |- +++.+.+.+.|++++ |.+++ .|
T Consensus 263 ~~~~~~~~~~~~l~~~L~-~i~--g-~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~l~~~L~~~~~~I~~r~~~~~~~ 338 (363)
T TIGR01437 263 ESGAEMVAKLTPFIEALN-TLK--G-VSASIVQDEAGRDIARAEIRFDESELGMTAADVVQALRQGEPAIYTRGYKANEG 338 (363)
T ss_pred ccHHHHHHHHHHHHHHHh-cCC--C-eEEEEecCCCCCcCceEEEEEeccCCCCCHHHHHHHHhcCCCCEEEeeeeecCC
Confidence 233344455667888887 652 1 444321 1111 1 1 11 456666665665555 88774 24
Q ss_pred --eEEeccCChhhHHHHHHHHHHHH
Q 012238 441 --RISLAGLSLAKCEYLADAIIDSY 463 (467)
Q Consensus 441 --Ris~~~~~~~~i~~~~~~l~~~l 463 (467)
||++...+++|++.++++|++++
T Consensus 339 ~~~l~~~~~~~~e~~~~~~~l~~~~ 363 (363)
T TIGR01437 339 IIEIDPRSVTGGQLDIIVERIREIV 363 (363)
T ss_pred eEEEEeecCCHHHHHHHHHHHHHhC
Confidence 78877778999999999998763
No 170
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.89 E-value=4.1e-21 Score=195.10 Aligned_cols=323 Identities=17% Similarity=0.192 Sum_probs=199.1
Q ss_pred CCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCC-----CcCC-CCcchHHH----HHHHHHHHhCCCCcccccCce
Q 012238 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGEN-----KEYL-PIEGLAAF----NKVTAELLFGADNSVLKEQRV 152 (467)
Q Consensus 83 ~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~-----~~Y~-~~~G~~~l----r~aia~~l~~~~~~~~~~~~i 152 (467)
.+.|+|..++. + +++.|++++...+..... ..|. ...-...+ |+.++++++.. ..+|
T Consensus 25 ~~~~~l~~~~n------~-~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~------~~~i 91 (416)
T PRK00011 25 EEHIELIASEN------F-VSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGAE------YANV 91 (416)
T ss_pred hcCeeeecccC------c-CCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCCC------ceee
Confidence 47899998764 3 378888888665422111 1110 11112233 33566665432 3445
Q ss_pred eeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHH-----HHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCC
Q 012238 153 ATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKN-----IFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP 227 (467)
Q Consensus 153 ~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~-----~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~ 227 (467)
++ .+|+.++.++ +...+.|||+|+++.|+|..+.. .+...|++++.++.+ .+++.+|++.+++.+++
T Consensus 92 ~~---~sgt~al~~~--l~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~d~~~l~~~i~~-- 163 (416)
T PRK00011 92 QP---HSGSQANAAV--YFALLKPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVD-EETGLIDYDEVEKLALE-- 163 (416)
T ss_pred ec---CCchHHHHHH--HHHhcCCCCEEEEeccccCCccccccccccccceeeEeecCcC-cccCCcCHHHHHHHHHh--
Confidence 44 4568888886 44456799999999999976432 123456778888774 23578999999999974
Q ss_pred CCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCC-CCCCCCCCCChhHHHHHHhcCCeEEEEecCccCc
Q 012238 228 GGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ-GFASGSLDNDASSVRLFATRGMELLVAQSYSKNL 306 (467)
Q Consensus 228 ~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~ 306 (467)
.+++++++++++|| ...+ +++|+++|+++|+++|+|++|. ++.+.+. .... .. ...+++.|+||.+
T Consensus 164 ~~~k~v~~~~~~~~--~~~~---~~~I~~la~~~~~~livD~a~~~g~~~~g~--~~~~----~~--~~di~~~S~~K~l 230 (416)
T PRK00011 164 HKPKLIIAGASAYS--RPID---FKRFREIADEVGAYLMVDMAHIAGLVAAGV--HPSP----VP--HADVVTTTTHKTL 230 (416)
T ss_pred cCCCEEEECCCcCC--CccC---HHHHHHHHHHcCCEEEEECcchhcccccCc--cCCC----CC--CCcEEEecCCcCC
Confidence 35667777666654 3333 6688888999999999999964 2222110 0001 11 2347799999976
Q ss_pred ccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchH-HHHHHHHHhCChhhHHHHHHHHHHHHHHHH
Q 012238 307 GLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVH-GARIVANVVGNPALFDEWKAEMEMMAGRIK 385 (467)
Q Consensus 307 ~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~ 385 (467)
+|.|.||++ +.++++++. ++........+.+.. ...++..++. .. ..+.+++..++++
T Consensus 231 --~g~~gg~i~--~~~~~~~~~------------l~~~~~~~~~~~~~~~~~aa~~~a~~--~~---~~~~~~~~~~~~~ 289 (416)
T PRK00011 231 --RGPRGGLIL--TNDEELAKK------------INSAVFPGIQGGPLMHVIAAKAVAFK--EA---LEPEFKEYAQQVV 289 (416)
T ss_pred --CCCCceEEE--eCCHHHHHH------------HHHHhCccccCCccHHHHHHHHHHHH--HH---HhhhHHHHHHHHH
Confidence 789999996 445677776 544433322222222 2222111111 11 1223567888999
Q ss_pred HHHHHHHHHhhhccCCCCCccccc-CCcceEEecCC-----CHHHHHHHHHcccEEEeCC-------------C-eEEe-
Q 012238 386 NVRQKLFDSLSAKDKSGKDWSFIL-RQIGMFSFTGL-----NKAQSDNMTNKWHVYMTKD-------------G-RISL- 444 (467)
Q Consensus 386 ~~r~~l~~~l~~~~g~~~~~~~~~-~~~g~f~~~~l-----~~~~~~~ll~~~gI~v~~g-------------g-Ris~- 444 (467)
++++++.+.|+ ++| +++.. ...++++|+.+ +.+.+.+.|+++||.+..+ + |++.
T Consensus 290 ~~~~~l~~~L~-~~g----~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~L~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~ 364 (416)
T PRK00011 290 KNAKALAEALA-ERG----FRVVSGGTDNHLVLVDLRSKGLTGKEAEAALEEANITVNKNAVPFDPRSPFVTSGIRIGTP 364 (416)
T ss_pred HHHHHHHHHHH-hCC----CeeeecCCCCeEEEEeCcccCCCHHHHHHHHHHcCcEEccCcCCCCCCCCCCCCceEecCH
Confidence 99999999999 776 34432 11235666644 3455666666779998731 2 7743
Q ss_pred ----ccCChhhHHHHHHHHHHHHHh
Q 012238 445 ----AGLSLAKCEYLADAIIDSYHN 465 (467)
Q Consensus 445 ----~~~~~~~i~~~~~~l~~~l~~ 465 (467)
.+++++++++++++|++++++
T Consensus 365 ~~~~~~~t~~di~~l~~~l~~~~~~ 389 (416)
T PRK00011 365 AITTRGFKEAEMKEIAELIADVLDN 389 (416)
T ss_pred HHhhcCcCHHHHHHHHHHHHHHHhc
Confidence 134689999999999998764
No 171
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.89 E-value=8.5e-21 Score=189.93 Aligned_cols=318 Identities=12% Similarity=0.080 Sum_probs=201.9
Q ss_pred chHHHHHHHHHHHhcC--CCCcCCCC--cchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHh--C
Q 012238 102 VLDVVKKAENLMLERG--ENKEYLPI--EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY--F 175 (467)
Q Consensus 102 ~~~~v~~a~~~~~~~~--~~~~Y~~~--~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~--~ 175 (467)
+.|.+.+++.+.+... ....| +. .-..++++.++++++.. +.++++ ++||++++..+...+... .
T Consensus 32 ~~~~~~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~~~la~~~g~~------~~~~~~--~~ggt~a~~~a~~~~~~~~~~ 102 (371)
T PRK13520 32 PHPIARKAHEMFLETNLGDPGLF-PGTAKLEEEAVEMLGELLHLP------DAYGYI--TSGGTEANIQAVRAARNLAKA 102 (371)
T ss_pred chHHHHHHHHHHHhcCCCCcccC-ccHHHHHHHHHHHHHHHhCCC------CCCeEE--ecCcHHHHHHHHHHHHhhccC
Confidence 3677788887777432 11112 21 11256778888875432 446777 899999998873332222 2
Q ss_pred CCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHH
Q 012238 176 PGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIA 255 (467)
Q Consensus 176 ~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~ 255 (467)
+||+|++..+.|..+...++..|++++.+|. ++++.+|++.+++.++ +++..+++++++||||.+.+.+ +|.
T Consensus 103 ~~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~---~~~~~vi~~~~~~~tG~~~~l~---~I~ 174 (371)
T PRK13520 103 EKPNIVVPESAHFSFDKAADMLGVELRRAPL--DDDYRVDVKAVEDLID---DNTIGIVGIAGTTELGQVDPIP---ELS 174 (371)
T ss_pred CCceEEecCcchHHHHHHHHHcCceEEEecC--CCCCcCCHHHHHHHHh---hCCEEEEEEcCCcCCcccCCHH---HHH
Confidence 5789999999999999999999999999987 3456799999999997 4565666677899999998855 667
Q ss_pred HHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecCCHHHHhhhhhhhHH
Q 012238 256 DVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVI 335 (467)
Q Consensus 256 ~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~ 335 (467)
++|+++|+++++|++|..+...-. .....+ .+ ....-..+..|.+| ++++|.++|+++ ..++++++.
T Consensus 175 ~l~~~~g~~livD~a~~~~~~~~~-~~~~~~-~~-~~~~vd~~~~s~~K-~~~a~~~~G~~~--~~~~~~~~~------- 241 (371)
T PRK13520 175 KIALENGIFLHVDAAFGGFVIPFL-DDPPNF-DF-SLPGVDSITIDPHK-MGLAPIPAGGIL--FRDESYLDA------- 241 (371)
T ss_pred HHHHHcCCCEEEEecchhHHHHhh-cCCCCc-cc-cCCCCceEEECCcc-ccCccCCceEEE--EcCHHHHHh-------
Confidence 779999999999999876542100 000000 00 01112244557778 556788999886 466666655
Q ss_pred HHHHHHHhhccCcc--------CCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcc-
Q 012238 336 QVKSQLKRLARPMY--------SNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWS- 406 (467)
Q Consensus 336 ~~~~~l~~~~~~~~--------~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~~~~~~- 406 (467)
+........ ...+.....++..+|..- ..+.+++..++..++++++.+.|+ ++| ++
T Consensus 242 -----l~~~~~~~~~~~~~~~~gt~~~~~~~~~~~al~~l-----~~~g~~~~~~~~~~~~~~l~~~L~-~~g----~~~ 306 (371)
T PRK13520 242 -----LAVDTPYLTSKKQATLTGTRSGAGVAATYAVMKYL-----GREGYRKVVERCMENTRWLAEELK-ERG----FEP 306 (371)
T ss_pred -----hcccCccccCCCCcceEeeccChHHHHHHHHHhhh-----cHhHHHHHHHHHHHHHHHHHHHHH-hCC----CEE
Confidence 321110000 011112222333333211 022356777888889999999998 776 34
Q ss_pred cccCCcceEEecCC-CHHHHHHHHHcccEEEeCCC-----eEEeccC-ChhhHHHHHHHHHHHHHh
Q 012238 407 FILRQIGMFSFTGL-NKAQSDNMTNKWHVYMTKDG-----RISLAGL-SLAKCEYLADAIIDSYHN 465 (467)
Q Consensus 407 ~~~~~~g~f~~~~l-~~~~~~~ll~~~gI~v~~gg-----Ris~~~~-~~~~i~~~~~~l~~~l~~ 465 (467)
+..+..+++.+ .+ +.+.+.+.|.++||.+..++ |||+... +++++++++++|++++++
T Consensus 307 ~~~~~~~~v~~-~~~~~~~v~~~L~~~gi~v~~~~~~~~iRis~~~~~t~edi~~~~~~l~~~~~~ 371 (371)
T PRK13520 307 VIEPVLNIVAF-DDPNPDEVREKLRERGWRVSVTRCPEALRIVCMPHVTREHIENFLEDLKEVKKR 371 (371)
T ss_pred ecCCCceEEEE-ecCCHHHHHHHHHHCCceeccCCCCCEEEEEEECCCCHHHHHHHHHHHHHHhhC
Confidence 44555554433 32 34444434444599987753 9987532 779999999999988753
No 172
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.89 E-value=1.6e-20 Score=187.97 Aligned_cols=328 Identities=12% Similarity=0.077 Sum_probs=215.2
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccC-ceeeeecCCc
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQ-RVATVQGLSG 160 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~-~i~~~~t~gg 160 (467)
+...|||..|.. .....+ .|.+.+++.+.+.... .+ +..-..++++.+++.+... ++ .+++ +++|
T Consensus 28 g~~~lD~~s~~~--~~~lG~-~p~v~~a~~~~~~~~~--~~-~~~~~~~~~~~la~~l~~~------~~~~~~~--~~SG 93 (375)
T PRK04260 28 GKKYLDFSSGIG--VTNLGF-HPQVQQALQKQAGLIW--HS-PNLYLNSLQEEVAQKLIGD------KDYLAFF--CNSG 93 (375)
T ss_pred CCEEEECCCCcc--cccCCC-CHHHHHHHHHHHHhcC--cc-cCccCCHHHHHHHHHHhcC------cCCEEEE--cCcc
Confidence 347899987742 113344 5678888888775421 12 2223457888999887543 23 3566 8999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCCcchH-HHHhhCCCC---------eEEeeeecCCCCCCChhhHHHHHHcCCCCc
Q 012238 161 TGSLRLAAALIERYFPGAKVLISSPTWGNHK-NIFNDARVP---------WSEYRYYDPKTVGLDFEGMIADIKAAPGGS 230 (467)
Q Consensus 161 t~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~-~~~~~~G~~---------~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~ 230 (467)
+++...+.++.....++++|++.+.+|.... ..+...|.+ +..++.. .-.|++.+++.+. ++.
T Consensus 94 seA~~~Al~~ar~~~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~dl~~l~~~l~---~~~ 166 (375)
T PRK04260 94 AEANEAAIKIARKATGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYA----IFNDLNSVKALVN---KNT 166 (375)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEe----CCCCHHHHHHhcC---CCe
Confidence 9999988555444456688999999887532 233222221 1111111 0148888888775 466
Q ss_pred EEEEeCCCCCCCCCCCC-HHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccC
Q 012238 231 FILLHGCAHNPTGIDPT-PEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY 309 (467)
Q Consensus 231 ~~i~i~~p~NPTG~~~~-~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~ 309 (467)
.++++.+++|++|...+ .+.++++.++|+++|+++|+||+|.++...+ ..+.. ......++ +.||||.++ +
T Consensus 167 a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g---~~~~~-~~~~~~pd---i~t~sK~l~-~ 238 (375)
T PRK04260 167 AAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTG---KLYAF-EHYGIEPD---IFTLAKGLA-N 238 (375)
T ss_pred EEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccc---chhhh-HhhCCCCC---EEEeccccc-C
Confidence 78889999999999754 5779999999999999999999998875432 12111 11122234 338999998 8
Q ss_pred CCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHH
Q 012238 310 AERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQ 389 (467)
Q Consensus 310 G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~ 389 (467)
|+|+||++ .++++.+. +.......+.+.+.+.+.++..+|+.... .+.+++.++..+..++
T Consensus 239 G~~ig~~~---~~~~~~~~------------~~~~~~~~t~~~~~~~~~aa~a~l~~~~~----~~~~~~~~~~~~~~~~ 299 (375)
T PRK04260 239 GVPVGAML---AKSSLGGA------------FGYGSHGSTFGGNKLSMAAASATLDIMLT----AGFLEQALENGNYLQE 299 (375)
T ss_pred CcceEEEE---EcHHHHhh------------cCCCCCCCCCCcCHHHHHHHHHHHHHHHh----hHHHHHHHHHHHHHHH
Confidence 99999996 67777666 43322233445667778888777754321 2335666777777777
Q ss_pred HHHHHhhhccCCCCCcccccCCcceEEecCC--CHH-HHHHHHHcccEEEeCCC----eEEe-ccCChhhHHHHHHHHHH
Q 012238 390 KLFDSLSAKDKSGKDWSFILRQIGMFSFTGL--NKA-QSDNMTNKWHVYMTKDG----RISL-AGLSLAKCEYLADAIID 461 (467)
Q Consensus 390 ~l~~~l~~~~g~~~~~~~~~~~~g~f~~~~l--~~~-~~~~ll~~~gI~v~~gg----Ris~-~~~~~~~i~~~~~~l~~ 461 (467)
.+.+.+. +.+. +.... ..|+++|+.+ +.+ +.+++. ++||.+.+.+ ||++ ..++++++++++++|++
T Consensus 300 ~l~~~~~-~~~~---~~~~~-~~g~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~lR~~~~~~~t~~~i~~~l~~l~~ 373 (375)
T PRK04260 300 QLQKALQ-DKET---VTTVR-GLGYMIGIETTADLSQLVEAAR-DKGLIVLTAGTNVIRLLPPLTLTKEEIEQGIAILSE 373 (375)
T ss_pred HHHHHHh-hCCC---eeEEe-ccceEEEEEecCcHHHHHHHHH-hCCCEEecCCCCEEEEcCCCccCHHHHHHHHHHHHH
Confidence 7777776 5532 22222 3688888864 333 444544 5699998875 8887 56688999999999987
Q ss_pred HH
Q 012238 462 SY 463 (467)
Q Consensus 462 ~l 463 (467)
++
T Consensus 374 ~~ 375 (375)
T PRK04260 374 VF 375 (375)
T ss_pred hC
Confidence 63
No 173
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.89 E-value=1.5e-20 Score=188.55 Aligned_cols=320 Identities=17% Similarity=0.115 Sum_probs=197.5
Q ss_pred chHHHHHHHHHHHhcCC-CC---cCCC----CcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHH
Q 012238 102 VLDVVKKAENLMLERGE-NK---EYLP----IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER 173 (467)
Q Consensus 102 ~~~~v~~a~~~~~~~~~-~~---~Y~~----~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~ 173 (467)
+|+.+.+++.+.+.... .. .|.. ..+..++|+.++++++... +++|++ |.|+++++.++ +...
T Consensus 12 ~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~-----~~~v~~--~~g~t~al~~~--~~~~ 82 (376)
T TIGR01977 12 KPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFNAPS-----SAHVVF--TNNATTALNIA--LKGL 82 (376)
T ss_pred CCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHhCcCC-----CCeEEE--eCCHHHHHHHH--HHhc
Confidence 36788888888775421 11 2322 2567899999999975431 457888 99999999987 4445
Q ss_pred hCCCCEEEEcCCCCcchHH----HHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHH
Q 012238 174 YFPGAKVLISSPTWGNHKN----IFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPE 249 (467)
Q Consensus 174 ~~~gd~Vlv~~P~y~~~~~----~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~ 249 (467)
+.+||+|+++.++|..+.. .++..|++++.++.+ .++.+|++.+++.++ ++++++++++|+||||.+++.+
T Consensus 83 ~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~~---~~~~~v~~~~~~n~tG~~~~~~ 157 (376)
T TIGR01977 83 LKEGDHVITTPMEHNSVARPLECLKEQIGVEITIVKCD--NEGLISPERIKRAIK---TNTKLIVVSHASNVTGTILPIE 157 (376)
T ss_pred cCCCCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecC--CCCCcCHHHHHHhcC---CCCeEEEEECCCCCccccCCHH
Confidence 6799999999999877543 445669999999874 356789999999986 5678899999999999999966
Q ss_pred HHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccC-CCccceEEEecCCHHHHhh
Q 012238 250 QWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY-AERIGAMNVVCSSSDLAAR 328 (467)
Q Consensus 250 ~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~-G~RiG~~~~v~~~~~~~~~ 328 (467)
+|.++|+++|+++|+|+++.... ... +. ....-.+++.|.+|.++.| | +|.++ ..+...+..
T Consensus 158 ---~i~~l~~~~~~~livD~a~~~g~-~~~--~~-------~~~~~D~~~~s~~K~l~~p~g--~g~l~--~~~~~~~~~ 220 (376)
T TIGR01977 158 ---EIGELAQENGIFFILDAAQTAGV-IPI--DM-------TELAIDMLAFTGHKGLLGPQG--TGGLY--IREGIKLKP 220 (376)
T ss_pred ---HHHHHHHHcCCEEEEEhhhccCc-cCC--Cc-------hhcCCCEEEecccccccCCCC--ceEEE--EcCCcCcCc
Confidence 56777999999999999964322 111 11 1112357788899987543 4 46664 244322221
Q ss_pred hhhhhHH---HHHHHHHhh-ccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCC
Q 012238 329 CCEVAVI---QVKSQLKRL-ARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKD 404 (467)
Q Consensus 329 ~~~~~~~---~~~~~l~~~-~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~~~~ 404 (467)
-...+.. ......+.. .+.....++.....++..+|+ + ..+...+.++++.++..+.+.+.|. +.+.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~r~~~~t~~~~~~~a~~~al~---~--~~~~g~~~~~~~~~~l~~~~~~~l~-~~~~--- 291 (376)
T TIGR01977 221 LKSGGTGSHSALIDQPSELPDRFESGTLNTPGIAGLNAGIK---F--IEKIGIANIAKKECMLTEKLLNGLR-EINK--- 291 (376)
T ss_pred eecCCCccccccccccccchhhccCCCCCHHHHHHHHHHHH---H--HHHhCHHHHHHHHHHHHHHHHHHHh-cCCC---
Confidence 0000000 000000000 000112233333223332331 1 0112346777888888888999887 5431
Q ss_pred cccccC-----CcceEEe--cCCCHHHHHHHH-HcccEEEeCC----------------C--eEEeccC-ChhhHHHHHH
Q 012238 405 WSFILR-----QIGMFSF--TGLNKAQSDNMT-NKWHVYMTKD----------------G--RISLAGL-SLAKCEYLAD 457 (467)
Q Consensus 405 ~~~~~~-----~~g~f~~--~~l~~~~~~~ll-~~~gI~v~~g----------------g--Ris~~~~-~~~~i~~~~~ 457 (467)
++...+ ..+...+ .+.+.+.+...+ +++||.+..| + ||++... ++++++++++
T Consensus 292 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~~gi~v~~g~~~~~~~~~~~g~~~~~~iRis~~~~~t~~dv~~~~~ 371 (376)
T TIGR01977 292 VKIYGPADPANRVGVVSFTVEGIDSEEVADILDEKFDIATRTGLHCAPLAHKTIGTFATGTIRLSLGYFNTEEEIEKLLE 371 (376)
T ss_pred eEEeCCCCccccCCeEEEEECCCCHHHHHHHHhccCCEEEEcccccchHHHHHhCCCCCCeEEEecCCCCCHHHHHHHHH
Confidence 344332 2232221 245655555444 4459988653 2 9997654 6799999999
Q ss_pred HHHH
Q 012238 458 AIID 461 (467)
Q Consensus 458 ~l~~ 461 (467)
+|++
T Consensus 372 ~l~~ 375 (376)
T TIGR01977 372 ALSE 375 (376)
T ss_pred HHhh
Confidence 9975
No 174
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.89 E-value=2.6e-21 Score=195.45 Aligned_cols=322 Identities=15% Similarity=0.105 Sum_probs=203.0
Q ss_pred cCCCCCCCCchHHHHHHHHHHHhcCCCCc--------CCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHH
Q 012238 93 YRTEELQPYVLDVVKKAENLMLERGENKE--------YLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSL 164 (467)
Q Consensus 93 ~~d~~~~p~~~~~v~~a~~~~~~~~~~~~--------Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al 164 (467)
|+|.++..++++.+++++...+....... +.......++|+.+++++... +++|++ ++|+|+++
T Consensus 6 yld~aa~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~------~~~v~~--~~g~t~a~ 77 (402)
T TIGR02006 6 YLDYAATTPVDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELIGAD------SREIVF--TSGATESN 77 (402)
T ss_pred EeeCCcCCCCCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCC------CCeEEE--eCCHHHHH
Confidence 34444555568889999877763211010 111234677889999986533 678988 99999999
Q ss_pred HHHHHHHHH--hCCCCEEEEcCCCCcchHHHH---hhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCC
Q 012238 165 RLAAALIER--YFPGAKVLISSPTWGNHKNIF---NDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAH 239 (467)
Q Consensus 165 ~l~~~~l~~--~~~gd~Vlv~~P~y~~~~~~~---~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~ 239 (467)
++++..+.. ..+||+|+++.+.|..+...+ +..|++++.++++ .++.+|++.+++.++ ++++++++++++
T Consensus 78 ~~~l~~l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~l~~~l~---~~~~lv~v~~~~ 152 (402)
T TIGR02006 78 NLAIKGIAHFYKSKGNHIITSKTEHKAVLDTCRYLEREGFEVTYLPPK--SNGLIDLEELKAAIR---DDTILVSIMHVN 152 (402)
T ss_pred HHHHHHHHHhhcCCCCEEEECCCccHHHHHHHHHHHhcCCEEEEEccC--CCCcCCHHHHHHhcC---CCCEEEEEECCC
Confidence 987433321 258999999999998765443 4569999999873 456799999999886 567899999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEe
Q 012238 240 NPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVV 319 (467)
Q Consensus 240 NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v 319 (467)
||||...+.+ +|.++|+++|+++++|+++. +..... +. ....-.+++.|..|.+|++| +|+++
T Consensus 153 n~tG~~~~~~---~I~~l~~~~g~~livD~a~a-~g~~~~--~~-------~~~~~D~~~~s~~K~~gp~G--~G~l~-- 215 (402)
T TIGR02006 153 NEIGVIQDIA---AIGEICRERKVFFHVDAAQS-VGKIPI--NV-------NELKVDLMSISGHKIYGPKG--IGALY-- 215 (402)
T ss_pred cCceecccHH---HHHHHHHHcCCEEEEEcchh-cCCccc--Cc-------cccCCCEEEEehhhhcCCCc--eEEEE--
Confidence 9999998755 77777999999999999954 322111 11 11123477888889988667 68875
Q ss_pred cCCHHHHhhhhhhhHHHHHHHHHh---hccCcc-CCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 012238 320 CSSSDLAARCCEVAVIQVKSQLKR---LARPMY-SNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSL 395 (467)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~-~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l 395 (467)
..++.. .. +.. +.. ..+... ..++.....++..+|+. .++.++...+++++.++++.+.|
T Consensus 216 ~~~~~~-~~--------~~~-~~~g~~~~~~~~~gt~~~~~~~al~~al~~------~~~~~~~~~~~~~~l~~~l~~~l 279 (402)
T TIGR02006 216 VRRKPR-VR--------LEA-LIHGGGHERGMRSGTLPTHQIVGMGEAFRI------AKEEMAQDTAHVLALRDRLLNGI 279 (402)
T ss_pred EccCCC-CC--------CCc-eecCCCccCCccCCCccHHHHHHHHHHHHH------HHHhHHHHHHHHHHHHHHHHHHH
Confidence 233222 11 000 000 000111 12333333333333321 12236677788899999999998
Q ss_pred hhccCCCCCcccc------cCCcceEEecCCCHHHHHHHHHcccEEEeCC-------------------------C--eE
Q 012238 396 SAKDKSGKDWSFI------LRQIGMFSFTGLNKAQSDNMTNKWHVYMTKD-------------------------G--RI 442 (467)
Q Consensus 396 ~~~~g~~~~~~~~------~~~~g~f~~~~l~~~~~~~ll~~~gI~v~~g-------------------------g--Ri 442 (467)
+ .+.. +... .|....+.|.+.+.+.+...+ .+|.+..| | |+
T Consensus 280 ~-~~~~---v~~~~~~~~~~p~~~~v~f~~~~~~~~~~~l--~~i~v~~G~~c~~~~~~~~~~l~~lg~~~~~~~~~vR~ 353 (402)
T TIGR02006 280 K-SIEE---VYLNGDLEHRVPGNLNVSFNYVEGESLIMAL--KDLAVSSGSACTSASLEPSYVLRALGINDELAHSSIRF 353 (402)
T ss_pred h-cCCC---EEEeCCccccCCCeEEEEEeCcCHHHHHHhc--CCEEEechhhcCCCCCCccHHHHHcCCChhhcCceEEE
Confidence 8 6431 2222 111123445555544443333 25654433 2 99
Q ss_pred EeccC-ChhhHHHHHHHHHHHHHhc
Q 012238 443 SLAGL-SLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 443 s~~~~-~~~~i~~~~~~l~~~l~~~ 466 (467)
|++.. +++|+++++++|+++++.+
T Consensus 354 S~~~~~t~edid~l~~~l~~~~~~~ 378 (402)
T TIGR02006 354 TIGRFTTEEEIDYAVKLVKSAIDKL 378 (402)
T ss_pred EecCCCCHHHHHHHHHHHHHHHHHH
Confidence 98765 6699999999999988654
No 175
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.89 E-value=3.1e-21 Score=191.19 Aligned_cols=299 Identities=12% Similarity=0.018 Sum_probs=201.4
Q ss_pred hHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHH-h-------
Q 012238 103 LDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER-Y------- 174 (467)
Q Consensus 103 ~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~-~------- 174 (467)
+..+.+.+....+... ..|....+..++++++++++....|....+.++++ |.|||+++.++...+.. .
T Consensus 12 ~~~~~~~~~~~~n~~~-~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~~--t~ggt~a~~~al~~~~~~~~~~~~~~ 88 (345)
T cd06450 12 PALLLEMLTSAKNAID-FTWDESPAATEMEAEVVNWLAKLFGLPSEDADGVF--TSGGSESNLLALLAARDRARKRLKAG 88 (345)
T ss_pred HHHHHHHHHHhcCCCC-cccccCchhHHHHHHHHHHHHHHhCCCCCCCCEEE--eCChhHHHHHHHHHHHHHhhhhhhcc
Confidence 5566666666665543 44888889999999999988665555433557888 99999999987443321 1
Q ss_pred --CC--CCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHc---CCCCcEEEEeCCCCCCCCCCCC
Q 012238 175 --FP--GAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKA---APGGSFILLHGCAHNPTGIDPT 247 (467)
Q Consensus 175 --~~--gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~---~~~~~~~i~i~~p~NPTG~~~~ 247 (467)
.+ ++.|+++.++|..+...++..|.+++.+++++ ++.+|++.+++.+++ ...+++++++++++||||.+.+
T Consensus 89 ~~~~~~~~~v~~~~~~h~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~ 166 (345)
T cd06450 89 GGRGIDKLVIVCSDQAHVSVEKAAAYLDVKVRLVPVDE--DGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDP 166 (345)
T ss_pred cccccCCeEEEEcCcchhHHHHHHHHHhcCeEEeeeCC--CCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCC
Confidence 12 34788899999999888888899999999842 358999999999974 1126678888999999999755
Q ss_pred HHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecCCHHHHh
Q 012238 248 PEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAA 327 (467)
Q Consensus 248 ~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~ 327 (467)
+++|+++|+++|+++++|++|..+.... +.... .......-..+..|++|.++ ++.++|++. .
T Consensus 167 ---~~~i~~~~~~~~~~l~vD~a~~~~~~~~---~~~~~-~~~~~~~~d~~~~s~~K~l~-~p~g~g~~~---~------ 229 (345)
T cd06450 167 ---LEEIADLAEKYDLWLHVDAAYGGFLLPF---PEPRH-LDFGIERVDSISVDPHKYGL-VPLGCSAVL---V------ 229 (345)
T ss_pred ---HHHHHHHHHHhCCeEEEechhhHHHhhC---hhhHH-HhcCccccCEEEEchhHhhC-CCcchHHHH---H------
Confidence 5678888999999999999988766421 11000 01111122456779999775 567788873 1
Q ss_pred hhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccc
Q 012238 328 RCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSF 407 (467)
Q Consensus 328 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~~~~~~~ 407 (467)
+ .+.+.++...+.. ..++++.++..+.++++.+.|+ +++. +..
T Consensus 230 --------------~-----------~~~~~~~l~~l~~--------~g~~~~~~~~~~~~~~l~~~L~-~~~~---~~~ 272 (345)
T cd06450 230 --------------R-----------ALKLWATLRRFGR--------DGYGEHIDRIVDLAKYLAELIR-ADPG---FEL 272 (345)
T ss_pred --------------H-----------HHHHHHHHHHHhH--------HHHHHHHHHHHHHHHHHHHHHh-cCCC---eEE
Confidence 1 2223333333322 2355677788888899999988 6631 443
Q ss_pred c-cCCcceEEec--C-----CCH-HHHHHHHHcccEEEeCC------C--eEEeccC--ChhhHHHHHHHHHH
Q 012238 408 I-LRQIGMFSFT--G-----LNK-AQSDNMTNKWHVYMTKD------G--RISLAGL--SLAKCEYLADAIID 461 (467)
Q Consensus 408 ~-~~~~g~f~~~--~-----l~~-~~~~~ll~~~gI~v~~g------g--Ris~~~~--~~~~i~~~~~~l~~ 461 (467)
. .++.+++.|. + .+. ++.++|. ++|+.+.++ + ||++... +++++++++++|++
T Consensus 273 ~~~~~~~iv~f~~~~~~~~~~~~~~i~~~L~-~~g~~~~~~~~~~~~~~lRis~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 273 LGEPNLSLVCFRLKPSVKLDELNYDLSDRLN-ERGGWHVPATTLGGPNVLRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred ecCCceeEEEEEECCcchhhHHHHHHHHHHH-hcCCEEEEeeEECCeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence 3 3566766554 2 122 3344554 455443332 2 9999753 77999999999876
No 176
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.89 E-value=1.3e-20 Score=190.39 Aligned_cols=336 Identities=14% Similarity=0.056 Sum_probs=210.6
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCC--CCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCC
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE--NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 159 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~--~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g 159 (467)
+...||+..|..-+.-|.- .|.|.+++.+.+.... ...| ......+|.+.++++. . .+++++ +++
T Consensus 38 G~~~lD~~~g~~~~~lGh~--~p~v~~A~~~~~~~~~~~~~~~-~~~~~~~la~~l~~~~-~-------~~~v~~--~~s 104 (406)
T PRK12381 38 GKEYIDFAGGIAVNALGHA--HPALREALNEQASKFWHTGNGY-TNEPVLRLAKKLIDAT-F-------ADRVFF--CNS 104 (406)
T ss_pred CCEEEEcCcCHhhccCCCC--CHHHHHHHHHHHhhcccccCcc-CCHHHHHHHHHHHhhC-C-------CCeEEE--cCC
Confidence 3478999877432223333 6778888888775321 1122 1222345556666552 1 358888 999
Q ss_pred chhHHHHHHHHHHHhC------CCCEEEEcCCCCcchHHHHhhCCCCeEE----eeeecC--CCCCCChhhHHHHHHcCC
Q 012238 160 GTGSLRLAAALIERYF------PGAKVLISSPTWGNHKNIFNDARVPWSE----YRYYDP--KTVGLDFEGMIADIKAAP 227 (467)
Q Consensus 160 gt~al~l~~~~l~~~~------~gd~Vlv~~P~y~~~~~~~~~~G~~~~~----v~~~~~--~~~~~d~~~l~~~l~~~~ 227 (467)
|++|++.+.++..... ...+|+..+.+|..........+..... .++.+. ...-.|++.+++.+.
T Consensus 105 GseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~--- 181 (406)
T PRK12381 105 GAEANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDLNSASALID--- 181 (406)
T ss_pred cHHHHHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCCCCHHHHHHhcc---
Confidence 9999999866543331 3468999999998765433222221110 011000 001247889988886
Q ss_pred CCcEEEEeCCCCCCCCCCC--CHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccC
Q 012238 228 GGSFILLHGCAHNPTGIDP--TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKN 305 (467)
Q Consensus 228 ~~~~~i~i~~p~NPTG~~~--~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 305 (467)
+++.++++ .|.||+|.++ +.+.+++|.++|++||+++|+||+|.++...+ ..+.. ......++ +.+|||.
T Consensus 182 ~~~aavii-EPv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G---~~~~~-~~~~v~pD---i~t~sK~ 253 (406)
T PRK12381 182 DQTCAVIV-EPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTG---ELYAY-MHYGVTPD---VLTTAKA 253 (406)
T ss_pred CCeeEEEE-eCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCc---chhhh-HhhCCCCC---EEEehhh
Confidence 45666665 6999998765 78999999999999999999999998885432 12211 11121223 3589999
Q ss_pred cccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHH
Q 012238 306 LGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIK 385 (467)
Q Consensus 306 ~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~ 385 (467)
++ +|+|+||++ .++++++. +.......+.+.+.+.+.++...|+. + . -.+.+++++
T Consensus 254 l~-gG~~ig~~~---~~~~~~~~------------~~~~~~~~t~~~~pl~~aaa~a~l~~--l----~--~~~~~~~~~ 309 (406)
T PRK12381 254 LG-GGFPIGAML---TTEKCASV------------MTVGTHGTTYGGNPLASAVAGKVLEL--I----N--TPEMLNGVK 309 (406)
T ss_pred hh-CCCceEEEE---EcHHHHhh------------cCCCCCCCCCCCCHHHHHHHHHHHHH--H----h--hccHHHHHH
Confidence 99 899999995 67777776 54433333445666777777665531 1 1 124667788
Q ss_pred HHHHHHHHHhhhccCCCCCcccccCCcceEEecCCC------HHHHHHHHHcccEEEeCCC----eEEecc-CChhhHHH
Q 012238 386 NVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLN------KAQSDNMTNKWHVYMTKDG----RISLAG-LSLAKCEY 454 (467)
Q Consensus 386 ~~r~~l~~~l~~~~g~~~~~~~~~~~~g~f~~~~l~------~~~~~~ll~~~gI~v~~gg----Ris~~~-~~~~~i~~ 454 (467)
++.+++.+.|+ +++....+-......|+++++.+. ...+...+.++||.+.+.| ||+++. .+++++++
T Consensus 310 ~~~~~l~~~L~-~l~~~~~~~~~vrg~Gl~~~~~l~~~~~~~~~~~~~~l~~~Gv~v~~~g~~~lRl~p~~~~t~~~i~~ 388 (406)
T PRK12381 310 QRHDWFVERLN-TINARYGLFSEIRGLGLLIGCVLNAEYAGKAKQISQEAAKAGVMVLIAGPNVVRFAPALNISEEEITT 388 (406)
T ss_pred HHHHHHHHHHH-HHHhhCCCEEEEecCeEEEEEEecCchhhHHHHHHHHHHHCCcEEeeCCCCEEEEeCCccCCHHHHHH
Confidence 88888888887 653111111112234666665432 1234444455799998754 887764 58899999
Q ss_pred HHHHHHHHHHhc
Q 012238 455 LADAIIDSYHNV 466 (467)
Q Consensus 455 ~~~~l~~~l~~~ 466 (467)
++++|.++++++
T Consensus 389 ~~~~l~~~l~~~ 400 (406)
T PRK12381 389 GLDRFARACERF 400 (406)
T ss_pred HHHHHHHHHHHH
Confidence 999999998764
No 177
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.89 E-value=1.6e-20 Score=188.29 Aligned_cols=215 Identities=17% Similarity=0.147 Sum_probs=153.6
Q ss_pred CCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHH----HHhhCCC
Q 012238 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKN----IFNDARV 199 (467)
Q Consensus 124 ~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~----~~~~~G~ 199 (467)
+.+-..+|++.+|++.+.. ..++ +++|++|+.++ +...+.+||+|+++.|+|..... .++..|+
T Consensus 62 ~~p~~~~le~~lA~l~g~~--------~~i~--~ssG~~Ai~~~--l~all~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi 129 (398)
T PRK08249 62 TNPTVQAFEEKVRILEGAE--------AATA--FSTGMAAISNT--LYTFLKPGDRVVSIKDTYGGTNKIFTEFLPRMGV 129 (398)
T ss_pred CChHHHHHHHHHHHHhCCC--------eEEE--eCChHHHHHHH--HHHhcCCCCEEEEcCCchHHHHHHHHHHHhhCCe
Confidence 5566789999999996532 3445 68889999987 55567899999999999986543 4556788
Q ss_pred CeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCC
Q 012238 200 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 279 (467)
Q Consensus 200 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~ 279 (467)
+++.++. .|++.+++.++ ++++++++++|+||||.+++.+ +|+++|+++|+++|+|++|..+....
T Consensus 130 ~v~~vd~-------~d~e~l~~~i~---~~tklV~ie~p~NPtg~v~dl~---~I~~la~~~gi~livD~t~a~~~~~~- 195 (398)
T PRK08249 130 DVTLCET-------GDHEQIEAEIA---KGCDLLYLETPTNPTLKIVDIE---RLAAAAKKVGALVVVDNTFATPINQN- 195 (398)
T ss_pred EEEEcCC-------CCHHHHHHhcC---CCCeEEEEECCCCCCCccCCHH---HHHHHHHHcCCEEEEECCcCccccCC-
Confidence 7776543 68999999987 5788999999999999999855 67777999999999999988654321
Q ss_pred CCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHH
Q 012238 280 DNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARI 359 (467)
Q Consensus 280 ~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 359 (467)
+. .. ...+++.|+||.++.+|.++|+++ +++++++++ ++..........+...+.+
T Consensus 196 -----~l----~~-~~Divv~S~sK~l~g~~~~~gG~v--v~~~~l~~~------------l~~~~~~~g~~~s~~~a~l 251 (398)
T PRK08249 196 -----PL----AL-GADLVIHSATKFLSGHADALGGVV--CGSKELMEQ------------VYHYREINGATMDPMSAYL 251 (398)
T ss_pred -----ch----hh-CCCEEeccCceecCCCCCceEEEE--ECCHHHHHH------------HHHHHHhcCCCCCHHHHHH
Confidence 11 11 123778999999998888886554 478888777 4444333344555555554
Q ss_pred HHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 012238 360 VANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD 399 (467)
Q Consensus 360 ~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~ 399 (467)
+..-|. .+..+.++..+++..+.+.|+ ..
T Consensus 252 ~l~~l~----------tL~~R~~~~~~na~~la~~L~-~~ 280 (398)
T PRK08249 252 ILRGMK----------TLKLRVRQQQESAMALAKYLQ-TH 280 (398)
T ss_pred HHhCcc----------hHHHHHHHHHHHHHHHHHHHH-cC
Confidence 433322 244455666677777888887 53
No 178
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.89 E-value=2.4e-20 Score=186.81 Aligned_cols=314 Identities=12% Similarity=0.079 Sum_probs=194.3
Q ss_pred hHHHHHHHHHHHhc--CCCCcCCC-CcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHh----C
Q 012238 103 LDVVKKAENLMLER--GENKEYLP-IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY----F 175 (467)
Q Consensus 103 ~~~v~~a~~~~~~~--~~~~~Y~~-~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~----~ 175 (467)
.+.+.+++...... +....|.. ..-..++++.++++++.. ++++++ +.|+++++.++...+..+ .
T Consensus 33 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~------~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~ 104 (373)
T TIGR03812 33 HPIAVKAYDMFIETNLGDPGLFPGTKKIEEEVVGSLGNLLHLP------DAYGYI--VSGGTEANIQAVRAAKNLAREEK 104 (373)
T ss_pred hHHHHHHHHHHhhcCCCCcccCccHHHHHHHHHHHHHHHhCCC------CCCeEE--eccHHHHHHHHHHHHHHHHhccC
Confidence 45556666665432 11122311 112367778888886442 456777 899999987763332221 3
Q ss_pred CCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHH
Q 012238 176 PGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIA 255 (467)
Q Consensus 176 ~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~ 255 (467)
+||+|++++++|..|...++..|++++.++.+ .++.+|++.+++.+++ ++..+++.+|+||||...+.+ +|.
T Consensus 105 ~g~~vl~~~~~h~~~~~~~~~~G~~~~~v~~~--~~~~~d~~~l~~~l~~---~~~~vv~~~~~~~tG~~~~~~---~i~ 176 (373)
T TIGR03812 105 RTPNIIVPESAHFSFEKAAEMLGLELRYAPLD--EDYTVDVKDVEDLIDD---NTIGIVGIAGTTELGQIDDIE---ELS 176 (373)
T ss_pred CCcEEEECCcchHHHHHHHHHcCCeEEEEeeC--CCCCcCHHHHHHHHhh---CcEEEEEECCCCCCCccCCHH---HHH
Confidence 67999999999999999999999999999983 4677999999999873 443334445899999987755 666
Q ss_pred HHHHhcCCeeEEeccCCCCCCCCC--CCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecCCHHHHhhhhhhh
Q 012238 256 DVIQEKNHIPFFDVAYQGFASGSL--DNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARCCEVA 333 (467)
Q Consensus 256 ~~~~~~~~~li~Deay~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~ 333 (467)
++|+++|+++|+|++|..+...-. ......+ .+...+-+ .+..|.+| +++++.|.|+++ ..++++++.
T Consensus 177 ~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~-d~~~~~~d-~~~~s~~K-~~~~~~~~G~~~--~~~~~~~~~----- 246 (373)
T TIGR03812 177 KIALENGIYLHVDAAFGGFVIPFLKKGYNPPPF-DFSLPGVQ-SITIDPHK-MGLSPIPAGGIL--FRSKSYLKY----- 246 (373)
T ss_pred HHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCc-cccCCCCC-EEEECccc-cCCCcCCceEEE--EeCHHHHhh-----
Confidence 779999999999999875431100 0000000 00001112 34567779 666788899775 466777665
Q ss_pred HHHHHHHHHhhccCc-cC--------CCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCC
Q 012238 334 VIQVKSQLKRLARPM-YS--------NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKD 404 (467)
Q Consensus 334 ~~~~~~~l~~~~~~~-~~--------~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~~~~ 404 (467)
+... .+. .. ..+.....++...|.. +. ++.+++..+++.++++++.+.|+ ++|.
T Consensus 247 -------l~~~-~~~~~~~~~~~~~gt~~~~~~~~~~~~l~~--l~---~~g~~~~~~~~~~~~~~l~~~L~-~~g~--- 309 (373)
T TIGR03812 247 -------LSVD-APYLTVKKQATITGTRSGASAAATYAVIKY--LG---REGYRKIVAECMENTRYLVEELK-KIGF--- 309 (373)
T ss_pred -------hccc-CcccCCCCCcceEeechhHHHHHHHHHHHH--hC---HHHHHHHHHHHHHHHHHHHHHHH-hCCC---
Confidence 3211 111 10 1222222333333321 10 23456788889999999999999 7763
Q ss_pred cccccCCcceEEecCC-C-HHHHHHHHHcccEEEeCCC-----eEEeccC-ChhhHHHHHHHHHH
Q 012238 405 WSFILRQIGMFSFTGL-N-KAQSDNMTNKWHVYMTKDG-----RISLAGL-SLAKCEYLADAIID 461 (467)
Q Consensus 405 ~~~~~~~~g~f~~~~l-~-~~~~~~ll~~~gI~v~~gg-----Ris~~~~-~~~~i~~~~~~l~~ 461 (467)
..+..+..+ ++.+.+ + .++.++|. ++||.+..+. ||++... +++++++++++|++
T Consensus 310 ~~~~~~~~~-~v~~~~~~~~~v~~~L~-~~gi~v~~~~~~~~iRis~~~~~t~edid~l~~~L~~ 372 (373)
T TIGR03812 310 EPVIEPVLN-IVAFEVDDPEEVRKKLR-DRGWYVSVTRCPKALRIVVMPHVTREHIEEFLEDLKE 372 (373)
T ss_pred eEEcCCCce-EEEEEeCCHHHHHHHHH-HCCceeccCCCCCEEEEEEECCCCHHHHHHHHHHHhh
Confidence 123344444 333332 2 33445555 4599998762 9988643 77999999999975
No 179
>PRK06460 hypothetical protein; Provisional
Probab=99.88 E-value=2e-20 Score=186.59 Aligned_cols=214 Identities=14% Similarity=0.080 Sum_probs=148.1
Q ss_pred CCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCC----cchHHHHhhCCC
Q 012238 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTW----GNHKNIFNDARV 199 (467)
Q Consensus 124 ~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y----~~~~~~~~~~G~ 199 (467)
......+|++++|++.... ..+++ .+|++++..+ +...+.+||+|+++.|.| ..|...++..|+
T Consensus 43 ~~p~~~~L~~~lA~l~g~~-------~~v~~---~sG~~ai~~~--l~al~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~ 110 (376)
T PRK06460 43 ANPTVLELTKKIVELENAE-------MGVAF---SSGMGAISTT--ALALLKPGNSVLVHRDMFGRSYRFFTDYLKNWGV 110 (376)
T ss_pred CCccHHHHHHHHHHHhCCC-------cEEEe---CCHHHHHHHH--HHHHhCCCCEEEEecCCcCcHHHHHHHHHHhhCc
Confidence 4567889999999996543 24444 6678888887 455577999999998655 455667788999
Q ss_pred CeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCC
Q 012238 200 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 279 (467)
Q Consensus 200 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~ 279 (467)
++..++.. +.+.+++.++ ++++++++++|+||||.+++.+ +|+++|+++|+++|+|++|......
T Consensus 111 ~v~~~~~~-------~~~~l~~~~~---~~tklV~l~sp~NPtG~v~d~~---~I~~la~~~g~~vivDea~~~~~~~-- 175 (376)
T PRK06460 111 NVDASNPG-------SDNIIEKAKS---KRYDVVFVENITNPLLRVVDIT---ELSKVCKENGSILIVDATFSTPINQ-- 175 (376)
T ss_pred EEEEECCC-------CHHHHHHhcC---CCceEEEEECCCCCCCcccCHH---HHHHHHHHcCCEEEEECCcCccccC--
Confidence 88877652 2233433333 5788999999999999999987 5677799999999999998754211
Q ss_pred CCChhHHHHHHhcCCeEEEEecCccCcccC-CCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHH
Q 012238 280 DNDASSVRLFATRGMELLVAQSYSKNLGLY-AERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGAR 358 (467)
Q Consensus 280 ~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~-G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 358 (467)
. +. .. ..++++.|+||.++.. |.|+||++ +++++++. +++.......+.+...
T Consensus 176 --~--~l----~~-~~divv~S~sK~l~G~~~~~~G~~~---~~~~l~~~------------l~~~~~~~g~~~~~~~-- 229 (376)
T PRK06460 176 --K--PL----EL-GADIVVHSASKFLAGHNDVIAGLAA---GYGKLLNV------------IDQMRRTLGTSLDPHA-- 229 (376)
T ss_pred --C--hh----hc-CCCEEEeecceeccCCCCceEEEEe---cCHHHHHH------------HHHHHHhcCCCCCHHH--
Confidence 1 11 11 2468999999998622 36799985 78888777 5444444333444332
Q ss_pred HHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 012238 359 IVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD 399 (467)
Q Consensus 359 ~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~ 399 (467)
+..++... +.++.+.+++.++++.+.+.|+ +.
T Consensus 230 -a~~~l~~~-------~~l~~r~~~~~~n~~~l~~~L~-~~ 261 (376)
T PRK06460 230 -AYLTLRGI-------KTLKIRMDVINRNAEQIAEFLE-GH 261 (376)
T ss_pred -HHHHHhch-------hhHHHHHHHHHHHHHHHHHHHH-cC
Confidence 22223322 2256677788899999999988 54
No 180
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.88 E-value=4e-20 Score=185.49 Aligned_cols=328 Identities=13% Similarity=0.111 Sum_probs=199.9
Q ss_pred EEecCcccCCCCCCCCchHHHHHHHHHHHhc------CCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCC
Q 012238 86 LNLGVGAYRTEELQPYVLDVVKKAENLMLER------GENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 159 (467)
Q Consensus 86 i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~------~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g 159 (467)
+||+.-.|. +... .|.++++..+.+++ +....|+...+..+|++++|+++.. ++.+++ ++|
T Consensus 1 ~~f~s~dyL---gl~~-~~~~~~~~~~a~~~~g~~~~~sr~~yg~~~~~~~LE~~lA~~~g~-------e~al~~--~sG 67 (392)
T PLN03227 1 LNFATHDFL---STSS-SPTLRQTALESLSHYGCGSCGPRGFYGTIDAHLELEQCMAEFLGT-------ESAILY--SDG 67 (392)
T ss_pred CCCcCcCcc---CCCC-CHHHHHHHHHHHHHhCCCCcccccccCChHHHHHHHHHHHHHhCC-------CcEEEe--cCc
Confidence 356655553 3332 56677777776643 1113377777899999999999754 346666 555
Q ss_pred chhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcC--------CCCcE
Q 012238 160 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA--------PGGSF 231 (467)
Q Consensus 160 gt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~--------~~~~~ 231 (467)
.+... .+ +...+.+||.|++.++.|..+...++..+++++.++..+ ..|++.+.+.+... .++++
T Consensus 68 ~~a~~-~~--i~~l~~~GD~Vl~~~~~h~s~~~~~~l~~~~~~~~~~~d----~~~l~~~~~~i~~~~~a~~~~~~~~t~ 140 (392)
T PLN03227 68 ASTTS-ST--VAAFAKRGDLLVVDRGVNEALLVGVSLSRANVRWFRHND----MKDLRRVLEQVRAQDVALKRKPTDQRR 140 (392)
T ss_pred HHHHH-HH--HHHhCCCCCEEEEeccccHHHHHHHHHcCCeEEEeCCCC----HHHHHHHHHHhhhhccccccccCCCcE
Confidence 55555 43 455678999999999999998888777787777665521 12334444444311 13678
Q ss_pred EEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCC-CCCCCChhHHHHH-H-hcCCeEEEEecCccCccc
Q 012238 232 ILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFAS-GSLDNDASSVRLF-A-TRGMELLVAQSYSKNLGL 308 (467)
Q Consensus 232 ~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~-~~~~~~~~~~~~~-~-~~~~~~i~~~S~SK~~~~ 308 (467)
+|++.+++||+|.+.+ +++|.++|++||+++|+||+|. +.. +. ........+ . ......+++.|+||.+|
T Consensus 141 ~vi~E~v~~~~G~i~~---l~~i~~l~~~~g~~livDe~~~-~g~~g~--~G~g~~~~~g~~p~~~~Div~~slsk~~g- 213 (392)
T PLN03227 141 FLVVEGLYKNTGTLAP---LKELVALKEEFHYRLILDESFS-FGTLGK--SGRGSLEHAGLKPMVHAEIVTFSLENAFG- 213 (392)
T ss_pred EEEEcCCcCCCCcccC---HHHHHHHHHHcCCEEEEECccc-ccccCC--CCCcHHHHcCCCCCCCceEEEeechhhhh-
Confidence 8999999999999999 4577888999999999999986 432 21 111111111 0 11234788999999876
Q ss_pred CCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccC-ccC-CCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHH
Q 012238 309 YAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARP-MYS-NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKN 386 (467)
Q Consensus 309 ~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~-~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~ 386 (467)
++.|++. +++++++. ++..... .++ +.+++.+.++...+... . ..++..+++++
T Consensus 214 --~~gg~v~---~~~~~~~~------------~~~~~~~~~~~~~~~p~~~~aa~~al~~~------~-~~~~~~~~l~~ 269 (392)
T PLN03227 214 --SVGGMTV---GSEEVVDH------------QRLSGSGYCFSASAPPFLAKADATATAGE------L-AGPQLLNRLHD 269 (392)
T ss_pred --ccCcEEe---cCHHHHHH------------HHHhCcCccccCCCCHHHHHHHHHHHHHH------h-cCHHHHHHHHH
Confidence 4458873 77777765 4332222 222 33444444444333211 0 02356677888
Q ss_pred HHHHHHHHhhhccCCCC------CcccccCCcceEEecCC-C-------------HHHHHHHHHcccEEEeCC-------
Q 012238 387 VRQKLFDSLSAKDKSGK------DWSFILRQIGMFSFTGL-N-------------KAQSDNMTNKWHVYMTKD------- 439 (467)
Q Consensus 387 ~r~~l~~~l~~~~g~~~------~~~~~~~~~g~f~~~~l-~-------------~~~~~~ll~~~gI~v~~g------- 439 (467)
+.+++.+.|+ +.+.|. .........+..+.+.+ + .++.+.+++ +||++.+.
T Consensus 270 ~~~~l~~~L~-~~~~~~~~~~rg~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~Gi~~~~~~~~~~~~ 347 (392)
T PLN03227 270 SIANLYSTLT-NSSHPYALKLRNRLVITSDPISPIIYLRLSDQEATRRTDETLILDQIAHHSLS-EGVAVVSTGGHVKKF 347 (392)
T ss_pred HHHHHHHHHH-hcCCccccccccccccCCCCCCCEEEEEeCCHHHhhhhhhhhHHHHHHHHHHH-CCCEEEecccccCCc
Confidence 8888888887 544321 00000111122222222 1 134455555 59988531
Q ss_pred ------C--eEEec-cCChhhHHHHHHHHHHHHHhc
Q 012238 440 ------G--RISLA-GLSLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 440 ------g--Ris~~-~~~~~~i~~~~~~l~~~l~~~ 466 (467)
. ||++. ..+++++++++++|+++++++
T Consensus 348 ~~~~P~~~iR~~~~~~~t~eei~~~~~~l~~~~~~~ 383 (392)
T PLN03227 348 LQLVPPPCLRVVANASHTREDIDKLLTVLGEAVEAI 383 (392)
T ss_pred CCCCCCceEEEEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 1 77764 358899999999999998764
No 181
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.88 E-value=3.6e-20 Score=185.62 Aligned_cols=214 Identities=14% Similarity=0.130 Sum_probs=151.2
Q ss_pred CcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchH----HHHhhCCCC
Q 012238 125 IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHK----NIFNDARVP 200 (467)
Q Consensus 125 ~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~----~~~~~~G~~ 200 (467)
..-..+|++.+++++.. +++++ ++||++|+.++ +...+.+||+|+++.+.|.... ..++..|++
T Consensus 60 ~p~~~~le~~la~l~g~--------~~~v~--~ssG~~Ai~~a--l~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~ 127 (390)
T PRK08133 60 NPTVTMFQERLAALEGA--------EACVA--TASGMAAILAV--VMALLQAGDHVVSSRSLFGSTVSLFEKIFARFGIE 127 (390)
T ss_pred ChHHHHHHHHHHHHhCC--------CcEEE--ECCHHHHHHHH--HHHHhCCCCEEEEccCcchhHHHHHHHHHHHcCcE
Confidence 44578899999999643 35666 89999999987 4556789999999999987544 345678999
Q ss_pred eEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCC
Q 012238 201 WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLD 280 (467)
Q Consensus 201 ~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~ 280 (467)
++.++. .|++.+++.++ ++++++++++|+||||.+.+. ++|+++|+++|+++|+|++|.......
T Consensus 128 v~~vd~-------~d~~~l~~~i~---~~tklV~ie~p~NptG~v~dl---~~I~~la~~~gi~livD~t~~~~~~~~-- 192 (390)
T PRK08133 128 TTFVDL-------TDLDAWRAAVR---PNTKLFFLETPSNPLTELADI---AALAEIAHAAGALLVVDNCFCTPALQQ-- 192 (390)
T ss_pred EEEECC-------CCHHHHHHhcC---cCCeEEEEECCCCCCCCcCCH---HHHHHHHHHcCCEEEEECCCcccccCC--
Confidence 988876 27888988886 578899999999999999875 577777999999999999986543321
Q ss_pred CChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHH
Q 012238 281 NDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIV 360 (467)
Q Consensus 281 ~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 360 (467)
++ ..+ ..+++.|+||.++.+|+++|+++ +.+++.++. +....+......+.+.+.++
T Consensus 193 ----pl----~~g-~Divv~S~sK~~~g~g~~~GG~v--v~~~~~~~~------------~~~~~~~~g~~~~~~~a~~~ 249 (390)
T PRK08133 193 ----PL----KLG-ADVVIHSATKYLDGQGRVLGGAV--VGSKELMEE------------VFGFLRTAGPTLSPFNAWVF 249 (390)
T ss_pred ----ch----hhC-CcEEEeecceeecCCcceEeEEE--EcCHHHHHH------------HHHHHHHhCCCCCHHHHHHH
Confidence 11 112 24789999999999999996654 366666665 33222222333444443332
Q ss_pred HHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 012238 361 ANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD 399 (467)
Q Consensus 361 ~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~ 399 (467)
+..- +.+..+.++..+++..+.+.|+ +.
T Consensus 250 ---l~gl-------~tl~~R~~~~~~~a~~la~~L~-~~ 277 (390)
T PRK08133 250 ---LKGL-------ETLSLRMEAHSANALALAEWLE-AH 277 (390)
T ss_pred ---Hccc-------chHHHHHHHHHHHHHHHHHHHH-hC
Confidence 2221 1244555666677778888887 54
No 182
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.88 E-value=2.9e-20 Score=186.60 Aligned_cols=214 Identities=13% Similarity=0.111 Sum_probs=147.1
Q ss_pred CCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHH----hhCCC
Q 012238 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF----NDARV 199 (467)
Q Consensus 124 ~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~----~~~G~ 199 (467)
+..-..+|++.+|++.... ...+ +.+|+.++..+ ++..+.+||+|+++.|.|..+...+ +..|+
T Consensus 63 ~~p~~~~Le~~lA~l~G~~--------~~~~--~~sG~~Ai~~~--l~~~l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~ 130 (398)
T PRK07504 63 SNPTVDMFEKRMCALEGAE--------DARA--TASGMAAVTAA--ILCQVKAGDHVVAARALFGSCRYVVETLLPRYGI 130 (398)
T ss_pred CCchHHHHHHHHHHHhCCC--------eeeE--ecCHHHHHHHH--HHHHhCCCCEEEEcCCchhHHHHHHHHHHhhcCe
Confidence 4556789999999996443 2233 57888888776 4556789999999999998765443 45688
Q ss_pred CeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCC
Q 012238 200 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 279 (467)
Q Consensus 200 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~ 279 (467)
+++.++ .+|++.++++++ +++++|++++|+||||.+++.+ +|.++|+++|+++|+|++|....+..
T Consensus 131 ~v~~vd-------~~d~e~l~~ai~---~~tklV~lesp~NptG~v~dl~---~I~~la~~~gi~lvvD~a~a~~~~~~- 196 (398)
T PRK07504 131 ESTLVD-------GLDLDNWEKAVR---PNTKVFFLESPTNPTLEVIDIA---AVAKIANQAGAKLVVDNVFATPLFQK- 196 (398)
T ss_pred EEEEEC-------CCCHHHHHHhcC---cCceEEEEECCCCCCcEecCHH---HHHHHHHHcCCEEEEECCccccccCC-
Confidence 777764 278999999887 6788999999999999999855 66777999999999999987554321
Q ss_pred CCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHH
Q 012238 280 DNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARI 359 (467)
Q Consensus 280 ~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 359 (467)
+. +. ...+++.|+||.++.+|+|+|+++ +.+++.+.. . ++...+.....++.+.+.+
T Consensus 197 -----~~----~~-gaDivv~S~sK~l~g~g~~~GG~v--v~~~~~i~~--------~---~~~~~~~~g~~~s~~~A~~ 253 (398)
T PRK07504 197 -----PL----EL-GAHIVVYSATKHIDGQGRCLGGVV--LSDKAWIEE--------H---LQDYFRHTGPSLSPFNAWT 253 (398)
T ss_pred -----ch----hh-CCCEEEeeccccccCCccceEEEE--EeCcHHHHH--------H---HHHHHHHhCCCCCHHHHHH
Confidence 11 11 245789999999999999998664 355554432 0 2222222233445444444
Q ss_pred HHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 012238 360 VANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLS 396 (467)
Q Consensus 360 ~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~ 396 (467)
+...|.. +..+.++..++...+.+.|+
T Consensus 254 ~l~~L~t----------l~~R~~~~~~na~~la~~L~ 280 (398)
T PRK07504 254 LLKGLET----------LPVRVRQQTESAAAIADFLA 280 (398)
T ss_pred HHhccch----------HHHHHHHHHHHHHHHHHHHH
Confidence 4333332 33444555566666677776
No 183
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.88 E-value=5.2e-20 Score=183.76 Aligned_cols=215 Identities=15% Similarity=0.107 Sum_probs=155.5
Q ss_pred CCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHh----hCCC
Q 012238 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN----DARV 199 (467)
Q Consensus 124 ~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~----~~G~ 199 (467)
+......|++++|++... +.+++ ++||++++.++ +...+.|||+|+++.|+|+.....+. ..|.
T Consensus 50 ~~pt~~~L~~~lA~l~g~--------~~~i~--~~sg~~Ai~~~--l~~l~~~GD~Vl~~~~~y~~~~~~~~~~~~~~gi 117 (386)
T PRK08045 50 GNPTRDVVQRALAELEGG--------AGAVL--TNTGMSAIHLV--TTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCY 117 (386)
T ss_pred CCccHHHHHHHHHHHhCC--------CeEEE--ECCHHHHHHHH--HHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhCCe
Confidence 566788999999999542 25777 89999999997 45567899999999999986433332 2333
Q ss_pred CeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCC
Q 012238 200 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 279 (467)
Q Consensus 200 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~ 279 (467)
++..++ ..|++.+++.++ ++++++++++|+||||.+++.+ +|.++|+++|+++|+|++|.......
T Consensus 118 ~v~~vd-------~~d~e~l~~~l~---~~tklV~l~sP~NPtG~v~di~---~I~~ia~~~g~~vivDeay~~~~~~~- 183 (386)
T PRK08045 118 RVLFVD-------QGDEQALRAALA---EKPKLVLVESPSNPLLRVVDIA---KICHLAREAGAVSVVDNTFLSPALQN- 183 (386)
T ss_pred EEEEeC-------CCCHHHHHHhcc---cCCeEEEEECCCCCCCEecCHH---HHHHHHHHcCCEEEEECCCCccccCC-
Confidence 444432 268899998886 5778999999999999999865 66666899999999999987654321
Q ss_pred CCChhHHHHHHhcCCeEEEEecCccCcc-cCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHH
Q 012238 280 DNDASSVRLFATRGMELLVAQSYSKNLG-LYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGAR 358 (467)
Q Consensus 280 ~~~~~~~~~~~~~~~~~i~~~S~SK~~~-~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 358 (467)
++ ..+. .+++.|++|.++ ..+.+.|+++ +.+++++++ +...........+.+.+.
T Consensus 184 -----pl----~~ga-Divv~S~tK~l~G~~d~~~G~vi--~~~~~~~~~------------l~~~~~~~g~~~~p~~~~ 239 (386)
T PRK08045 184 -----PL----ALGA-DLVLHSCTKYLNGHSDVVAGVVI--AKDPDVVTE------------LAWWANNIGVTGGAFDSY 239 (386)
T ss_pred -----ch----hhCC-CEEEeecceeccCCCCceeEEEE--eCcHHHHHH------------HHHHHHhcCCCCCHHHHH
Confidence 11 1222 388999999985 5667789885 567777776 444444445567777777
Q ss_pred HHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 012238 359 IVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD 399 (467)
Q Consensus 359 ~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~ 399 (467)
++...|.. +..+.++..+++..+.+.|+ ..
T Consensus 240 l~~rgl~t----------l~~R~~~~~~na~~la~~L~-~~ 269 (386)
T PRK08045 240 LLLRGLRT----------LVPRMELAQRNAQAIVKYLQ-TQ 269 (386)
T ss_pred HHHhhhcc----------HHHHHHHHHHHHHHHHHHHH-cC
Confidence 77666653 44566777777888888887 54
No 184
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.88 E-value=2.2e-20 Score=191.41 Aligned_cols=324 Identities=14% Similarity=0.103 Sum_probs=196.8
Q ss_pred CcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCC-----Ccc----hHHHHHHHHHHHhCCCCcccccCceee
Q 012238 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLP-----IEG----LAAFNKVTAELLFGADNSVLKEQRVAT 154 (467)
Q Consensus 84 ~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~-----~~G----~~~lr~aia~~l~~~~~~~~~~~~i~~ 154 (467)
..++|+.|.| .+.. +..+.++.... .. ...|.| ..| ..++++.+++++ |.+ .+++.+
T Consensus 69 ~~~~lg~g~~----~~~~-p~~~~~~~~~~--~~-~~~y~~~~~~~~~g~~~~~~e~~~~la~l~----g~~--~~~v~~ 134 (447)
T PRK00451 69 YPSFLGAGAY----DHYI-PAVVDHIISRS--EF-YTAYTPYQPEISQGTLQAIFEYQTMICELT----GMD--VANASM 134 (447)
T ss_pred CcccCccccc----CCcC-cHHHHHHHhch--hH-HHhcCCCCCccchHHHHHHHHHHHHHHHHh----CCC--cceEEe
Confidence 6788999987 3332 55555444322 11 133555 344 223334444443 322 457878
Q ss_pred eecCCchhHHHHHHHHHHH-hCCCCEEEEcCCCCcchHHHHhh----CCCCeEEeeeecCCCCCCChhhHHHHHHcCCCC
Q 012238 155 VQGLSGTGSLRLAAALIER-YFPGAKVLISSPTWGNHKNIFND----ARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGG 229 (467)
Q Consensus 155 ~~t~ggt~al~l~~~~l~~-~~~gd~Vlv~~P~y~~~~~~~~~----~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 229 (467)
|.||++++..+ +++. ..+||+|+++.|.|+.+...++. .|++++.++++ .+ .+|++.+++.++ ++
T Consensus 135 --~~g~t~~~~~~--~~a~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~~--~~-~~d~~~l~~~i~---~~ 204 (447)
T PRK00451 135 --YDGATALAEAA--LMAVRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYE--DG-VTDLEALEAAVD---DD 204 (447)
T ss_pred --cCcHHHHHHHH--HHHHHhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEecCC--CC-CCCHHHHHHhcC---CC
Confidence 99999998876 3444 35899999999999988877664 69999999984 24 799999999987 57
Q ss_pred cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEE--eccCCCCCCCCCCCChhHHHHHHhcCCeEEEEe---cCcc
Q 012238 230 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFF--DVAYQGFASGSLDNDASSVRLFATRGMELLVAQ---SYSK 304 (467)
Q Consensus 230 ~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~--Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~---S~SK 304 (467)
++++++++| ||||.+.+ +++|+++|+++|+++++ |.+..++... . .+. ...+++. +|||
T Consensus 205 t~~v~l~~p-n~tG~v~~---l~~I~~~a~~~~~~~iv~~d~~~~g~~~~---~--------~~~-~~D~~~~s~~k~~~ 268 (447)
T PRK00451 205 TAAVVVQYP-NFFGVIED---LEEIAEIAHAGGALFIVGVDPVSLGLLKP---P--------GEY-GADIVVGEGQPLGI 268 (447)
T ss_pred eEEEEEECC-CCCCeeCC---HHHHHHHHHHCCCEEEEEcChHHhccCCC---c--------ccC-CCCEEEECCCcCCC
Confidence 888899999 89999866 55777889999999988 5442221100 0 011 2234444 7888
Q ss_pred CcccCCCccceEEEecCCHHHHhhhhhhh-HHH---------------HH-HHHHhhccCccCCCchHHH-HHHHHHhCC
Q 012238 305 NLGLYAERIGAMNVVCSSSDLAARCCEVA-VIQ---------------VK-SQLKRLARPMYSNPPVHGA-RIVANVVGN 366 (467)
Q Consensus 305 ~~~~~G~RiG~~~~v~~~~~~~~~~~~~~-~~~---------------~~-~~l~~~~~~~~~~~~~~~~-~~~~~~L~~ 366 (467)
.+.+.|+|+||++ .++++++. +++. .+. .. ..++........+.+...+ .++...+..
T Consensus 269 ~~~~~Gpg~G~l~---~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~ 344 (447)
T PRK00451 269 PLSFGGPYLGFFA---TRKKLVRQ-MPGRLVGETVDADGKRGFVLTLQAREQHIRREKATSNICTNQALNALAAAIYMSL 344 (447)
T ss_pred CCCCCCCCchHHH---hhHHHHhh-CCCCEeeeecccCCCeeeEeeccccccccccccccccccccHHHHHHHHHHHHHH
Confidence 8888999999995 56666654 1000 000 00 0001111111112222222 122111210
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceEEe--cC--CC-HHHHHHHHHcccEEE-eCC-
Q 012238 367 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSF--TG--LN-KAQSDNMTNKWHVYM-TKD- 439 (467)
Q Consensus 367 ~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~~~g~f~~--~~--l~-~~~~~~ll~~~gI~v-~~g- 439 (467)
+ -.+.++++.+++.++++++.+.|+ +++. +++. .+++|.+ +. .+ .++.++|+++ ||.. .++
T Consensus 345 --~---~~~g~~~~~~~~~~~~~~l~~~L~-~~~g---~~~~--~~~~~~~~~v~~~~~~~~~~~~L~~~-gi~~~~~~~ 412 (447)
T PRK00451 345 --L---GPEGLRELAEQNHQKAHYLAERLA-EIGG---VELF--DGPFFNEFVVRLPKPAEEVNEALLEK-GILGGYDLG 412 (447)
T ss_pred --H---CHHHHHHHHHHHHHHHHHHHHHHh-hcCC---EEec--CCCeEEEEEEecCCCHHHHHHHHHhc-CCCCCcccc
Confidence 0 023467888999999999999998 7642 4443 3455543 33 23 4556677664 6642 111
Q ss_pred -------C--eEEecc-CChhhHHHHHHHHHHHH
Q 012238 440 -------G--RISLAG-LSLAKCEYLADAIIDSY 463 (467)
Q Consensus 440 -------g--Ris~~~-~~~~~i~~~~~~l~~~l 463 (467)
+ |+++.. .+++++++++++|++++
T Consensus 413 ~~~~~~~~~~rvs~~~~~t~e~i~~l~~~L~~~~ 446 (447)
T PRK00451 413 RYYPELGNHLLVCVTEKRTKEDIDALVAALGEVL 446 (447)
T ss_pred cccCCcCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 2 888763 37799999999998865
No 185
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.88 E-value=2.1e-19 Score=181.63 Aligned_cols=328 Identities=12% Similarity=0.081 Sum_probs=207.6
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCC-CcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCc
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGEN-KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 160 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~-~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~gg 160 (467)
+.+.+|+..|..-...|. -.|.+.+++.+.++.... ..+.......+|.+.++++. + .+++++ +++|
T Consensus 40 g~~~lD~~~~~~~~~~Gh--~~~~i~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~-------~~~~~~--~~SG 107 (401)
T PRK00854 40 GNRYLDCLSAYSAVNQGH--CHPKILAAMVEQAGRLTLTSRAFRNDQLAPLYEELAALT-G-------SHKVLP--MNSG 107 (401)
T ss_pred CCEEEEcCcchhhccCCC--CCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhhC-C-------CCEEEE--eCCc
Confidence 347899877743111122 267788888887754211 11123344566777777763 2 247888 8999
Q ss_pred hhHHHHHHHHHHHh-------CCC-CEEEEcCCCCcchHHHHhhCCC-------------CeEEeeeecCCCCCCChhhH
Q 012238 161 TGSLRLAAALIERY-------FPG-AKVLISSPTWGNHKNIFNDARV-------------PWSEYRYYDPKTVGLDFEGM 219 (467)
Q Consensus 161 t~al~l~~~~l~~~-------~~g-d~Vlv~~P~y~~~~~~~~~~G~-------------~~~~v~~~~~~~~~~d~~~l 219 (467)
++|++.+..++... .+| ++|++..-+|......+...+. .+..++. .|++.+
T Consensus 108 s~A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l 180 (401)
T PRK00854 108 AEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVPF-------GDAEAL 180 (401)
T ss_pred HHHHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEeCC-------CCHHHH
Confidence 99999985554332 124 6888888877654333222221 1222221 488999
Q ss_pred HHHHHcCCCCcEEEEeCCCCCCCCCCCCH-HHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEE
Q 012238 220 IADIKAAPGGSFILLHGCAHNPTGIDPTP-EQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV 298 (467)
Q Consensus 220 ~~~l~~~~~~~~~i~i~~p~NPTG~~~~~-~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~ 298 (467)
++.+. ++++++++++|+||||.++++ +.+++|.++|++||+++|+||+|.++...+ ..+.. .......++++
T Consensus 181 e~~i~---~~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~~g---~~~~~-~~~g~~~D~~~ 253 (401)
T PRK00854 181 EAAIT---PNTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGRTG---KLLAE-EHEGIEADVTL 253 (401)
T ss_pred HHHhC---CCeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCc---hHhHH-hhcCCCCCEEE
Confidence 99886 578899999999999999974 469999999999999999999998775432 11111 11111223332
Q ss_pred EecCccCcccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHH
Q 012238 299 AQSYSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEME 378 (467)
Q Consensus 299 ~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~ 378 (467)
++|.++...+|+||++ .++++++. +.........+.+.+.+.++...|+.. .+ .
T Consensus 254 ---~~K~l~gg~~~ig~v~---~~~~~~~~------------l~~~~~~~t~~~~~~~~aa~~a~L~~l------~~--~ 307 (401)
T PRK00854 254 ---IGKALSGGFYPVSAVL---SNSEVLGV------------LKPGQHGSTFGGNPLACAVARAALKVL------TE--E 307 (401)
T ss_pred ---ecccccCCccCeEEEE---EcHHHHhc------------ccCCCCCCCCCcCHHHHHHHHHHHHHH------HH--c
Confidence 3688874447999995 77777776 543333333355777777777666421 11 2
Q ss_pred HHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceEEec--C--CC-HHHHHHHHHcccEEEeCCC----eEEec-cCC
Q 012238 379 MMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFT--G--LN-KAQSDNMTNKWHVYMTKDG----RISLA-GLS 448 (467)
Q Consensus 379 ~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~~~g~f~~~--~--l~-~~~~~~ll~~~gI~v~~gg----Ris~~-~~~ 448 (467)
...++++++++++.+.|+ +++.+. +....+.|.++.+. + .+ .++++.|++ +||.+.+.+ ||++. ..+
T Consensus 308 ~~~~~~~~~~~~l~~~L~-~~~~~~-~~~~~g~g~~~~i~~~~~~~~~~~~~~~L~~-~GV~v~~~~~~~lR~~p~~~~t 384 (401)
T PRK00854 308 GMIENAAEMGAYFLEGLR-SIRSNI-VREVRGRGLMLAVELEPEAGGARQYCEALKE-RGLLAKDTHDHTIRLAPPLVIT 384 (401)
T ss_pred CHHHHHHHHHHHHHHHHH-hhccCc-eEEEeccceEEEEEEecCchhHHHHHHHHHH-CCeEEecCCCCEEEEeCCcccC
Confidence 356778888899999998 765311 11224556655442 2 12 344566665 599998653 88863 348
Q ss_pred hhhHHHHHHHHHHHHH
Q 012238 449 LAKCEYLADAIIDSYH 464 (467)
Q Consensus 449 ~~~i~~~~~~l~~~l~ 464 (467)
++++++++++|++++.
T Consensus 385 ~e~i~~~i~~l~~~l~ 400 (401)
T PRK00854 385 REQVDWALEQIAKVLA 400 (401)
T ss_pred HHHHHHHHHHHHHHhh
Confidence 8999999999998874
No 186
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.88 E-value=5.8e-20 Score=183.33 Aligned_cols=219 Identities=15% Similarity=0.095 Sum_probs=151.9
Q ss_pred CcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhh-CC
Q 012238 120 KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFND-AR 198 (467)
Q Consensus 120 ~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~-~G 198 (467)
.+| +.....+|++++|++.. .+++++ ++||++|+.++ +...+.+||+|+++.|+|......+.. .+
T Consensus 46 ~R~-~~p~~~~le~~lA~l~g--------~~~v~~--~~gg~~Ai~~~--l~all~~GD~Vl~~~p~y~~~~~~~~~~~~ 112 (382)
T TIGR02080 46 SRS-GNPTRDLLQQALAELEG--------GAGAVV--TNTGMSAIHLV--TTALLGPDDLLVAPHDCYGGTYRLLNALAK 112 (382)
T ss_pred cCC-CCchHHHHHHHHHHHhC--------CCcEEE--EcCHHHHHHHH--HHHHcCCCCEEEEcCCCcHHHHHHHHHHHh
Confidence 344 55667899999999853 246777 99999999998 455678999999999999865544332 22
Q ss_pred CCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCC
Q 012238 199 VPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGS 278 (467)
Q Consensus 199 ~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~ 278 (467)
.....+...+ ..|++.++++++ ++++++++++|+||||.+++.+ +|+++|+++|+++|+|++|..+...
T Consensus 113 ~~~~~v~~~d----~~d~~~l~~ai~---~~tklV~l~~p~NPtG~~~dl~---~I~~la~~~g~~vvvD~a~~~~~~~- 181 (382)
T TIGR02080 113 KGCFRVLFVD----QGDEQALRAALA---QKPKLVLIETPSNPLLRVVDIA---KICHLAKAVGAVVVVDNTFLSPALQ- 181 (382)
T ss_pred hcCeEEEEEC----CCCHHHHHHhcC---cCceEEEEECCCCCCCEecCHH---HHHHHHHHcCCEEEEECCCcccccC-
Confidence 2223333321 247899999887 5688999999999999999865 6777799999999999999765432
Q ss_pred CCCChhHHHHHHhcCCeEEEEecCccCcc-cCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHH
Q 012238 279 LDNDASSVRLFATRGMELLVAQSYSKNLG-LYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGA 357 (467)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~i~~~S~SK~~~-~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 357 (467)
. ++ ..+ ..++++|+||.++ .+|++.|+++ +.+++++++ +...........+.+.+
T Consensus 182 ---~--pl----~~g-aDivv~S~sK~l~G~~~~~~G~i~--~~~~~~~~~------------l~~~~~~~g~~~sp~~a 237 (382)
T TIGR02080 182 ---N--PL----ALG-ADLVLHSCTKYLNGHSDVIAGAVI--AKDPQVAEE------------LAWWANNLGVTGGAFDS 237 (382)
T ss_pred ---C--ch----hhC-CCEEEeecceeccCCCCceeEEEE--eCCHHHHHH------------HHHHHHccCCCCCHHHH
Confidence 1 11 112 2488899999886 5788999985 567777776 54444444445566555
Q ss_pred HHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 012238 358 RIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLS 396 (467)
Q Consensus 358 ~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~ 396 (467)
..+..-|+ .+..+.++..++...+.+.|+
T Consensus 238 ~l~lr~l~----------tl~~R~~~~~~na~~~a~~L~ 266 (382)
T TIGR02080 238 YLTLRGLR----------TLVARMRLQQRNAQAIVEYLQ 266 (382)
T ss_pred HHHHcccc----------hHHHHHHHHHHHHHHHHHHHH
Confidence 54433222 233445566677777777776
No 187
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.87 E-value=4.2e-20 Score=183.64 Aligned_cols=272 Identities=17% Similarity=0.135 Sum_probs=179.2
Q ss_pred CCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHH----hhCCC
Q 012238 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF----NDARV 199 (467)
Q Consensus 124 ~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~----~~~G~ 199 (467)
+.....+|++++|++. . ++.++ +.+|++++.++ +...+.+||+|+++.|+|..+...+ +..|+
T Consensus 49 ~~p~~~~Le~~lA~l~-~-------~~~v~---~~sG~~Ai~~~--l~all~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G~ 115 (366)
T PRK07582 49 SNPTWRALEAALGELE-G-------AEALV---FPSGMAAITAV--LRALLRPGDTVVVPADGYYQVRALAREYLAPLGV 115 (366)
T ss_pred CCccHHHHHHHHHHHc-C-------CCEEE---ECCHHHHHHHH--HHHhcCCCCEEEEeCCCcHhHHHHHHHHHhcCeE
Confidence 6778999999999995 2 34444 57778899887 4556789999999999998886644 45799
Q ss_pred CeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCC
Q 012238 200 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 279 (467)
Q Consensus 200 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~ 279 (467)
+++.++..++ .+ .+. ++++++++++|+||||.+.+ +++|+++|+++|+++|+|++|.... +.
T Consensus 116 ~v~~v~~~~~------~~----~~~---~~t~lV~le~p~NPtg~v~d---i~~I~~~a~~~g~~lvVD~t~~~~~-~~- 177 (366)
T PRK07582 116 TVREAPTAGM------AE----AAL---AGADLVLAETPSNPGLDVCD---LAALAAAAHAAGALLVVDNTTATPL-GQ- 177 (366)
T ss_pred EEEEECCCCh------HH----Hhc---cCceEEEEECCCCCCCCccC---HHHHHHHHHHcCCEEEEECCCCCcc-cc-
Confidence 9888876311 11 122 46788899999999998765 5678888999999999999985321 11
Q ss_pred CCChhHHHHHHhcCCeEEEEecCccCc-ccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHH
Q 012238 280 DNDASSVRLFATRGMELLVAQSYSKNL-GLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGAR 358 (467)
Q Consensus 280 ~~~~~~~~~~~~~~~~~i~~~S~SK~~-~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 358 (467)
. ++ +.+. .++++|+||.+ |.+|+|+||++ +.++++++. ++.........++.+.+.
T Consensus 178 --~--p~----~~g~-Divv~S~sK~l~G~~g~~~G~v~--~~~~~l~~~------------l~~~~~~~g~~~~~~~a~ 234 (366)
T PRK07582 178 --R--PL----ELGA-DLVVASDTKALTGHSDLLLGYVA--GRDPELMAA------------VERWRLLAGAIPGPFEAW 234 (366)
T ss_pred --C--ch----hcCC-cEEEecccccccCCCCeeEEEEE--cCcHHHHHH------------HHHHHHHhCCCCCHHHHH
Confidence 1 11 1222 37889999988 45689999995 456777776 444444444456666666
Q ss_pred HHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC------CCCccccc----------CCcceEEec-CCC
Q 012238 359 IVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKS------GKDWSFIL----------RQIGMFSFT-GLN 421 (467)
Q Consensus 359 ~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~------~~~~~~~~----------~~~g~f~~~-~l~ 421 (467)
.+...|.. +..+.++..++...+.+.|+ +... |+ +.-.+ ..||++.|. + +
T Consensus 235 l~~r~l~t----------l~~R~~~~~~na~~la~~L~-~~p~v~~v~yp~-l~~~p~~~~~~~~~~~~gg~~s~~~~-~ 301 (366)
T PRK07582 235 LAHRSLGT----------LGLRFARQCANALAVAELLA-GHPAVRGVRYPG-LPGDPAHEVAARQMRRFGGLVSFELA-D 301 (366)
T ss_pred HHHhcccc----------HHHHHHHHHHHHHHHHHHHH-hCCCccEEECCC-CCCCccHHHHHhhCCCCcceEEEEeC-C
Confidence 65555543 23333555566677777776 4321 11 01011 246666543 3 5
Q ss_pred HHHHHHHHHcccEEEe-C--------------------CC--eEEeccCChhhHHHHHHHHHHHHHh
Q 012238 422 KAQSDNMTNKWHVYMT-K--------------------DG--RISLAGLSLAKCEYLADAIIDSYHN 465 (467)
Q Consensus 422 ~~~~~~ll~~~gI~v~-~--------------------gg--Ris~~~~~~~~i~~~~~~l~~~l~~ 465 (467)
.+.+.+.+++.++... + .| |||++- |+.+.+++.|.++++.
T Consensus 302 ~~~~~~~~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~liR~svGl---E~~~dli~dl~~al~~ 365 (366)
T PRK07582 302 AAAAERFVAASRLVVAATSFGGVHTSADRRARWGDAVPEGFVRLSCGI---EDTDDLVADLERALDA 365 (366)
T ss_pred HHHHHHHHHhCCcceecccCCCccchhhhHHHcCCCCCCCeEEEEecc---CCHHHHHHHHHHHHhh
Confidence 6666677776666442 1 12 999987 4566667777777654
No 188
>PRK14012 cysteine desulfurase; Provisional
Probab=99.87 E-value=6.7e-20 Score=185.39 Aligned_cols=320 Identities=16% Similarity=0.099 Sum_probs=196.9
Q ss_pred ccCCCCCCCCchHHHHHHHHHHHh--cCCC--C------cCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCch
Q 012238 92 AYRTEELQPYVLDVVKKAENLMLE--RGEN--K------EYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (467)
Q Consensus 92 ~~~d~~~~p~~~~~v~~a~~~~~~--~~~~--~------~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (467)
.|+|.++..++++.+.+++.+.+. .... . .|.......++|+.+++++... ++++++ ++|+|
T Consensus 5 iyld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~g~~------~~~v~~--~~g~t 76 (404)
T PRK14012 5 IYLDYSATTPVDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLIGAD------PREIVF--TSGAT 76 (404)
T ss_pred EEecCcCCCCCCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHcCcC------cCeEEE--eCCHH
Confidence 355555666668889999888764 1110 0 1111234678899999986533 678888 99999
Q ss_pred hHHHHHHHHHHH--hCCCCEEEEcCCCCcchHHHH---hhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeC
Q 012238 162 GSLRLAAALIER--YFPGAKVLISSPTWGNHKNIF---NDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHG 236 (467)
Q Consensus 162 ~al~l~~~~l~~--~~~gd~Vlv~~P~y~~~~~~~---~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~ 236 (467)
++++++...+.. ..+||+|+++.++|+.+...+ +..|++++.++.+ .++.+|++.+++.++ +++++++++
T Consensus 77 ~al~~~l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v~~~--~~g~~d~~~l~~~i~---~~t~lv~~~ 151 (404)
T PRK14012 77 ESDNLAIKGAAHFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLDPQ--SNGIIDLEKLEAAMR---DDTILVSIM 151 (404)
T ss_pred HHHHHHHHHHHHhhcCCCCEEEEecCccHHHHHHHHHHHhCCCEEEEEccC--CCCcCCHHHHHHhcC---CCCEEEEEE
Confidence 999987433321 358999999999997765544 3469999999874 456789999999997 577899999
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceE
Q 012238 237 CAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAM 316 (467)
Q Consensus 237 ~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~ 316 (467)
+++||||.+.+. ++|.++|+++|+++|+|+++. +.... .+ + ....-.+++.|++|.+|.. ++|++
T Consensus 152 ~~~n~tG~~~~~---~~I~~la~~~g~~vivD~a~~-~g~~~--~~---~----~~~~~D~~~~s~~K~~gp~--g~G~l 216 (404)
T PRK14012 152 HVNNEIGVIQDI---AAIGEICRERGIIFHVDAAQS-VGKVP--ID---L----SKLKVDLMSFSAHKIYGPK--GIGAL 216 (404)
T ss_pred CcCCCccchhhH---HHHHHHHHHcCCEEEEEcchh-cCCcc--cC---c----ccCCCCEEEEehhhccCCC--ceEEE
Confidence 999999998875 577777999999999999954 22111 11 1 1112346677999988743 47888
Q ss_pred EEecCCHHHHhhhhhhhHHHHHHHHHhh-c-----cCccCC-CchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHH
Q 012238 317 NVVCSSSDLAARCCEVAVIQVKSQLKRL-A-----RPMYSN-PPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQ 389 (467)
Q Consensus 317 ~~v~~~~~~~~~~~~~~~~~~~~~l~~~-~-----~~~~~~-~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~ 389 (467)
+ +.+... .+ +... . .....+ ++.........++.. . +.......++.++.++
T Consensus 217 ~--~~~~~~-~~------------~~~~~~g~~~~~~~~~gt~~~~~~~~l~~al~~---~---~~~~~~~~~~~~~l~~ 275 (404)
T PRK14012 217 Y--VRRKPR-VR------------LEAQMHGGGHERGMRSGTLPTHQIVGMGEAARI---A---KEEMATENERIRALRD 275 (404)
T ss_pred E--EecCCC-CC------------CCceecCCCccCCccCCCcCHHHHHHHHHHHHH---H---HhhHHHHHHHHHHHHH
Confidence 6 233321 12 1110 0 001111 222221122222211 1 1124456677788888
Q ss_pred HHHHHhhhccCCCCCccccc-----CCcceEEecC-CCHHHHHHHHHcccEEEeCC------------------------
Q 012238 390 KLFDSLSAKDKSGKDWSFIL-----RQIGMFSFTG-LNKAQSDNMTNKWHVYMTKD------------------------ 439 (467)
Q Consensus 390 ~l~~~l~~~~g~~~~~~~~~-----~~~g~f~~~~-l~~~~~~~ll~~~gI~v~~g------------------------ 439 (467)
++.+.|+ .+.. +.... ....+++|+. .+.+.+...++ ++.+..|
T Consensus 276 ~l~~~L~-~~~~---i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~ 349 (404)
T PRK14012 276 RLWNGIK-DIEE---VYLNGDLEQRVPGNLNVSFNYVEGESLIMALK--DLAVSSGSACTSASLEPSYVLRALGLNDELA 349 (404)
T ss_pred HHHHHHh-cCCC---EEEeCCccccCCCEEEEEEeCcCHHHHHHhCC--CeEEEchhhhCCCCCCCCHHHHHcCCChhhc
Confidence 8888887 5421 22211 1122334433 23333333333 3433222
Q ss_pred -C--eEEecc-CChhhHHHHHHHHHHHHHhc
Q 012238 440 -G--RISLAG-LSLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 440 -g--Ris~~~-~~~~~i~~~~~~l~~~l~~~ 466 (467)
+ ||+++. .+++++++++++|+++++.+
T Consensus 350 ~~~iRls~~~~~t~~dvd~~~~~l~~~~~~~ 380 (404)
T PRK14012 350 HSSIRFSLGRFTTEEEIDYAIELVRKSIGKL 380 (404)
T ss_pred CceEEEEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 2 999875 37799999999999988654
No 189
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.87 E-value=3.4e-19 Score=172.85 Aligned_cols=325 Identities=14% Similarity=0.080 Sum_probs=213.6
Q ss_pred CCCCchHHHHHHHHHHHhcCCCCcCCC--CcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhC
Q 012238 98 LQPYVLDVVKKAENLMLERGENKEYLP--IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF 175 (467)
Q Consensus 98 ~~p~~~~~v~~a~~~~~~~~~~~~Y~~--~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~ 175 (467)
|+.++++.|++++..-.. ..+.| ..-..+.++.+...+.... .+-+++ +.+||.+++.+ +.+.+.
T Consensus 12 GP~~v~~~V~~am~~~~~----~h~s~~F~~~~~~~~~~L~~v~~t~~-----~~~~ll--~gsGt~amEAa--v~sl~~ 78 (383)
T COG0075 12 GPVPVPPRVLLAMARPMV----GHRSPDFVGIMKEVLEKLRKVFGTEN-----GDVVLL--SGSGTLAMEAA--VASLVE 78 (383)
T ss_pred CCCCCCHHHHHHhcCCCC----CCCCHHHHHHHHHHHHHHHHHhcCCC-----CcEEEE--cCCcHHHHHHH--HHhccC
Confidence 444568889888755332 12222 1223444454555543321 122334 78889999987 666777
Q ss_pred CCCEEEEcCCCCc--chHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHH
Q 012238 176 PGAKVLISSPTWG--NHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEK 253 (467)
Q Consensus 176 ~gd~Vlv~~P~y~--~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~ 253 (467)
|||+|++...+.+ .+.++++.+|++++.+.. +++..+|++++++.+++. +..+++.+++...+||+..+.+ +
T Consensus 79 pgdkVLv~~nG~FG~R~~~ia~~~g~~v~~~~~--~wg~~v~p~~v~~~L~~~-~~~~~V~~vH~ETSTGvlnpl~---~ 152 (383)
T COG0075 79 PGDKVLVVVNGKFGERFAEIAERYGAEVVVLEV--EWGEAVDPEEVEEALDKD-PDIKAVAVVHNETSTGVLNPLK---E 152 (383)
T ss_pred CCCeEEEEeCChHHHHHHHHHHHhCCceEEEeC--CCCCCCCHHHHHHHHhcC-CCccEEEEEeccCcccccCcHH---H
Confidence 9999999998775 567899999999999987 567789999999999954 3455777788889999988655 7
Q ss_pred HHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcc-cCCCccceEEEecCCHHHHhh---h
Q 012238 254 IADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG-LYAERIGAMNVVCSSSDLAAR---C 329 (467)
Q Consensus 254 l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~-~~G~RiG~~~~v~~~~~~~~~---~ 329 (467)
|+++|++||.++|+|.+ ..+.-.+.+.+.|. -++++.+ .-|.++ .||+ |.+. .+++..++ .
T Consensus 153 I~~~~k~~g~l~iVDaV-sS~Gg~~~~vd~wg--------iDv~itg-SQK~l~~PPGl--a~v~---~S~~a~e~~~~~ 217 (383)
T COG0075 153 IAKAAKEHGALLIVDAV-SSLGGEPLKVDEWG--------IDVAITG-SQKALGAPPGL--AFVA---VSERALEAIEER 217 (383)
T ss_pred HHHHHHHcCCEEEEEec-ccCCCcccchhhcC--------ccEEEec-CchhccCCCcc--ceeE---ECHHHHHHHhcC
Confidence 77779999999999999 44544333344443 3455444 456664 5774 6664 44444443 2
Q ss_pred hhh-hHHHHHHHHHhhcc-CccC-CCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcc
Q 012238 330 CEV-AVIQVKSQLKRLAR-PMYS-NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWS 406 (467)
Q Consensus 330 ~~~-~~~~~~~~l~~~~~-~~~~-~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~~~~~~ 406 (467)
+.+ -|.++....+.+.. ..+. .+|...-.++..+|+ ...++.++.+.+|++++.+.+++.++ .+|+ +
T Consensus 218 ~~~~~ylDL~~~~~~~~~~~~~p~Tppv~~i~aL~~al~-----~i~~EGle~r~~RH~~~~~a~r~~~~-alGl----~ 287 (383)
T COG0075 218 KHPSFYLDLKKWLKYMEKKGSTPYTPPVNLIYALREALD-----LILEEGLEARIARHRRLAEALRAGLE-ALGL----E 287 (383)
T ss_pred CCCceeecHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHH-----HHHHhhHHHHHHHHHHHHHHHHHHHH-HcCC----c
Confidence 223 35555555444432 2222 344444444444443 22245588999999999999999999 9986 3
Q ss_pred cccCC-------cceEEecCCCH-HHHHHHHHcccEEEeCC-----C---eEE-eccCChhhHHHHHHHHHHHHHhc
Q 012238 407 FILRQ-------IGMFSFTGLNK-AQSDNMTNKWHVYMTKD-----G---RIS-LAGLSLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 407 ~~~~~-------~g~f~~~~l~~-~~~~~ll~~~gI~v~~g-----g---Ris-~~~~~~~~i~~~~~~l~~~l~~~ 466 (467)
..... ..+++--+++. +....+++++||.+.+| | ||+ ++..+.+++.+++.+|..++.++
T Consensus 288 ~~~~~~~~s~tvta~~~P~g~~~~~~~~~~~~~~g~~i~gg~~~l~gkifRIGhMG~~~~~dv~~~l~ale~~L~~~ 364 (383)
T COG0075 288 LFADPERRSPTVTAIKVPEGVDDKKVRRALLKEYGVEIAGGQGPLKGKIFRIGHMGNVRPEDVLAALAALEAALREL 364 (383)
T ss_pred cccCcccCCCceEEEECCCCCCcHHHHHHHHHhCCEEecccccccCccEEEEecCccCCHHHHHHHHHHHHHHHHHc
Confidence 33311 11112224443 33447888889999888 2 997 56668899999999999999865
No 190
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.87 E-value=7.7e-20 Score=183.18 Aligned_cols=275 Identities=15% Similarity=0.118 Sum_probs=176.6
Q ss_pred CCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHh----hCCC
Q 012238 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN----DARV 199 (467)
Q Consensus 124 ~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~----~~G~ 199 (467)
+.....+|++.+|++... ++.++ +++|+.++..+ +...+.+||+|+++.|.|......++ ..|+
T Consensus 59 ~~pt~~~Le~~lA~l~G~-------~~al~---~~sG~~Ai~~~--l~al~~~Gd~Vv~~~~~y~~~~~~~~~~~~~~gi 126 (386)
T PRK06767 59 GNPTVKLFEERMAVLEGG-------EEALA---FGSGMAAISAT--LIGFLKAGDHIICSNGLYGCTYGFLEVLEEKFMI 126 (386)
T ss_pred CCcchHHHHHHHHHHhCC-------CcEEE---ECCHHHHHHHH--HHHHhCCCCEEEEcCCcHHHHHHHHHHHHhhcCe
Confidence 556678999999999643 33444 47778888876 55567899999999999876655543 3454
Q ss_pred CeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCC
Q 012238 200 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 279 (467)
Q Consensus 200 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~ 279 (467)
++..++. .|++.++++++ ++++++++++|+||||.+++.+ +|.++|+++|+++|+|++|.......
T Consensus 127 ~~~~~~~-------~d~~~l~~~i~---~~tklV~lesp~NptG~v~dl~---~I~~la~~~g~~vivD~a~a~~~~~~- 192 (386)
T PRK06767 127 THSFCDM-------ETEADIENKIR---PNTKLIFVETPINPTMKLIDLK---QVIRVAKRNGLLVIVDNTFCSPYLQR- 192 (386)
T ss_pred EEEEeCC-------CCHHHHHHhhC---cCceEEEEeCCCCCCceecCHH---HHHHHHHHcCCEEEEECCCcccccCC-
Confidence 4433322 47889988886 5788999999999999999865 66667999999999999986433221
Q ss_pred CCChhHHHHHHhcCCeEEEEecCccCcccCCCcc-ceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHH
Q 012238 280 DNDASSVRLFATRGMELLVAQSYSKNLGLYAERI-GAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGAR 358 (467)
Q Consensus 280 ~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~Ri-G~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 358 (467)
++ ..+ ..+++.|+||.++.+|+|+ ||++ ++++.++. +...+. .......+.+.+.
T Consensus 193 -----pl----~~g-~Div~~S~sK~l~g~g~~~gG~v~---~~~~~i~~--------~~~~~~---~~~g~~~~~~~a~ 248 (386)
T PRK06767 193 -----PL----ELG-CDAVVHSATKYIGGHGDVVAGVTI---CKTRALAE--------KIRPMR---KDIGGIMAPFDAW 248 (386)
T ss_pred -----ch----hcC-CcEEEecCcceecCCCCceeEEEE---eChHHHHH--------HHHHHH---HHhCCCCCHHHHH
Confidence 11 112 2477899999999899997 7774 66666665 222121 1122334444444
Q ss_pred HHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcc-cc-----------cCCcceEEec-CCCHHH-
Q 012238 359 IVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWS-FI-----------LRQIGMFSFT-GLNKAQ- 424 (467)
Q Consensus 359 ~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~~~~~~-~~-----------~~~~g~f~~~-~l~~~~- 424 (467)
++...|+. +..+.++.+++...+.+.|+ +.+. ++ +. ...+|++.|. +-+.+.
T Consensus 249 l~~~~L~t----------l~~r~~~~~~~a~~la~~L~-~~p~---v~~v~~p~~~~~~~~~~~~gg~vsf~l~~~~~~~ 314 (386)
T PRK06767 249 LLLRGLKT----------LAVRMDRHCDNAEKIVSFLK-NHDA---VEGVWYPEGELASRQMKRGGGVISFSIKGGKEET 314 (386)
T ss_pred HHHcCCCc----------HHHHHHHHHHHHHHHHHHHH-cCCC---ccEEECCCcHHHHHhCCCCCceEEEEEcCCHHHH
Confidence 44333322 33455667778888888888 6531 22 11 2345665443 212222
Q ss_pred --HHHHHHcccEEEeCC-------------------------C------eEEeccCChhhHHHHHHHHHHHHHh
Q 012238 425 --SDNMTNKWHVYMTKD-------------------------G------RISLAGLSLAKCEYLADAIIDSYHN 465 (467)
Q Consensus 425 --~~~ll~~~gI~v~~g-------------------------g------Ris~~~~~~~~i~~~~~~l~~~l~~ 465 (467)
+.+.++..++.+.-| | |||++- |+.+.+++-|.+++..
T Consensus 315 ~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGl---E~~~dl~~dl~~al~~ 385 (386)
T PRK06767 315 QAFINDLHFITIAVSLGDTETLIQHPATMTHAAIPAELRQEMGIYDNLIRLSVGL---ESWEDIVSDLEQALKK 385 (386)
T ss_pred HHHHHhCCccEEecCCCCcCccccCCCccccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHhh
Confidence 222334455554444 1 999987 5677777777777654
No 191
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.87 E-value=1.8e-19 Score=180.91 Aligned_cols=213 Identities=14% Similarity=0.119 Sum_probs=149.6
Q ss_pred CCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcc----hHHHHhhCCC
Q 012238 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGN----HKNIFNDARV 199 (467)
Q Consensus 124 ~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~----~~~~~~~~G~ 199 (467)
+.....+|++.+|++... ++.++ +.+|++++.++ +...+.+||+|+++.|+|.. +...++..|.
T Consensus 58 ~~p~~~~Le~~lA~l~g~-------~~~v~---~~sG~~Ai~~~--l~all~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~ 125 (405)
T PRK08776 58 GNPTRDLLGEALAELEGG-------AGGVI---TATGMGAINLV--LNALLQPGDTLVVPHDAYGGSWRLFNALAKKGHF 125 (405)
T ss_pred CChHHHHHHHHHHHHhCC-------CceEE---EcCHHHHHHHH--HHHHhCCCCEEEEccCCchHHHHHHHHHHHhcCc
Confidence 344567899999998543 33454 47778999987 45557899999999999986 4445566777
Q ss_pred CeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCC
Q 012238 200 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 279 (467)
Q Consensus 200 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~ 279 (467)
+++.++. .|++.+++.++ ++++++++++|+||||.+.+ +++|+++|+++|+++|+|++|......
T Consensus 126 ~v~~v~~-------~d~~~l~~~i~---~~tklV~l~~P~NPtG~v~d---l~~I~~la~~~gi~vIvD~a~a~~~~~-- 190 (405)
T PRK08776 126 ALITADL-------TDPRSLADALA---QSPKLVLIETPSNPLLRITD---LRFVIEAAHKVGALTVVDNTFLSPALQ-- 190 (405)
T ss_pred EEEEECC-------CCHHHHHHhcC---cCCeEEEEECCCCCCCccCC---HHHHHHHHHHcCCEEEEECCCcccccC--
Confidence 7777654 47889988886 56889999999999999865 567888899999999999998643211
Q ss_pred CCChhHHHHHHhcCCeEEEEecCccCcccC-CCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHH
Q 012238 280 DNDASSVRLFATRGMELLVAQSYSKNLGLY-AERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGAR 358 (467)
Q Consensus 280 ~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~-G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 358 (467)
. ++ ..+ ..+++.|.+|.++.+ +...|+++ +.++++.++ +.........+.+.+.+.
T Consensus 191 --~--pl----~~g-aDivv~S~tK~l~g~~~~~~G~vv--~~~~~l~~~------------l~~~~~~~g~~~s~~~a~ 247 (405)
T PRK08776 191 --K--PL----EFG-ADLVLHSTTKYINGHSDVVGGAVV--ARDAELHQQ------------LVWWANALGLTGSPFDAF 247 (405)
T ss_pred --C--cc----ccc-CCEEEecCceeecCCCCceEEEEE--eCCHHHHHH------------HHHHHHhcCCCCCHHHHH
Confidence 1 11 112 238899999999766 46678875 567777766 333322223345666655
Q ss_pred HHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 012238 359 IVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLS 396 (467)
Q Consensus 359 ~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~ 396 (467)
++...++ .++.+.++..++...+.+.|+
T Consensus 248 l~~~gl~----------tl~~r~~~~~~na~~la~~L~ 275 (405)
T PRK08776 248 LTLRGLR----------TLDARLRVHQENADAIAALLD 275 (405)
T ss_pred HHHhhhC----------cHHHHHHHHHHHHHHHHHHHH
Confidence 5543332 255666777777888888887
No 192
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.86 E-value=3.1e-19 Score=178.79 Aligned_cols=167 Identities=16% Similarity=0.137 Sum_probs=127.1
Q ss_pred CCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcch----HHHHhhCCC
Q 012238 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNH----KNIFNDARV 199 (467)
Q Consensus 124 ~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~----~~~~~~~G~ 199 (467)
+.....+|++.+|++.+.. ..++ +++|+.++.++ +...+.+||+|+++.|.|... ...+...|+
T Consensus 57 ~~p~~~~le~~lA~l~g~~--------~av~--~~sG~~Ai~~~--l~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~ 124 (391)
T TIGR01328 57 GNPTVSNLEGRIAFLEGTE--------AAVA--TSSGMGAIAAT--LLTILKAGDHLISDECLYGCTFALLEHALTKFGI 124 (391)
T ss_pred CCchHHHHHHHHHHHhCCC--------cEEE--ECCHHHHHHHH--HHHHhCCCCEEEEecCcchHHHHHHHHHHhcCCe
Confidence 4455778999999996543 3455 68889999887 455577999999999988643 344566888
Q ss_pred CeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCC
Q 012238 200 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 279 (467)
Q Consensus 200 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~ 279 (467)
+++.++. .|++.+++.++ +++++|++++|+||||.+.+.+ +|+++|+++|+++|+|++|.......
T Consensus 125 ~~~~vd~-------~d~e~l~~~i~---~~tklV~le~p~Np~G~v~dl~---~I~~la~~~gi~livD~a~a~~~~~~- 190 (391)
T TIGR01328 125 QVDFINM-------AIPEEVKAHIK---DNTKIVYFETPANPTMKLIDME---RVCRDAHSQGVKVIVDNTFATPMLTN- 190 (391)
T ss_pred EEEEECC-------CCHHHHHHhhc---cCCeEEEEECCCCCCCcccCHH---HHHHHHHHcCCEEEEECCCchhccCC-
Confidence 8888766 27888988886 5788999999999999988755 67777999999999999987543321
Q ss_pred CCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecCCHHHHhh
Q 012238 280 DNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAAR 328 (467)
Q Consensus 280 ~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~ 328 (467)
++ ..+ ..+++.|+||.++.+|.++|+++ ++++++++.
T Consensus 191 -----~~----~~g-~Divv~S~sK~lgg~g~~~gG~v--~~~~~li~~ 227 (391)
T TIGR01328 191 -----PV----ALG-VDVVVHSATKYIGGHGDVVAGLI--CGKAELLQQ 227 (391)
T ss_pred -----ch----hcC-CCEEEccccccccCCCCceEEEE--EcCHHHHHH
Confidence 11 122 33888999999999998875553 477887776
No 193
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.86 E-value=3.9e-19 Score=177.97 Aligned_cols=213 Identities=15% Similarity=0.118 Sum_probs=145.2
Q ss_pred CCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHH----hhCCC
Q 012238 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF----NDARV 199 (467)
Q Consensus 124 ~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~----~~~G~ 199 (467)
+.....+|++++|++.... ..++ +.+|++|+.++ +...+.+||+|+++.|+|......+ +..|+
T Consensus 59 ~~p~~~~Le~~lA~~~g~~-------~~i~---~~sG~~Ai~~~--l~all~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi 126 (388)
T PRK07811 59 GNPTRTALEEQLAALEGGA-------YGRA---FSSGMAATDCL--LRAVLRPGDHIVIPNDAYGGTFRLIDKVFTRWGV 126 (388)
T ss_pred CCccHHHHHHHHHHHhCCC-------ceEE---eCCHHHHHHHH--HHHHhCCCCEEEEcCCCchHHHHHHHHhCcCCCe
Confidence 5677899999999996543 2343 46789999998 4555789999999999998543332 33566
Q ss_pred CeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCC
Q 012238 200 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 279 (467)
Q Consensus 200 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~ 279 (467)
+++.++. .|++.+++.++ +++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|.......
T Consensus 127 ~~~~~d~-------~d~e~l~~~i~---~~tklV~ie~p~NPtg~~~d---l~~I~~la~~~gi~lIvD~a~a~~~~~~- 192 (388)
T PRK07811 127 EYTPVDL-------SDLDAVRAAIT---PRTKLIWVETPTNPLLSITD---IAALAELAHDAGAKVVVDNTFASPYLQQ- 192 (388)
T ss_pred EEEEeCC-------CCHHHHHHhcC---cCCeEEEEECCCCCcceecC---HHHHHHHHHHcCCEEEEECCCCccccCC-
Confidence 6666543 58899999887 57889999999999998655 5577788999999999999987654321
Q ss_pred CCChhHHHHHHhcCCeEEEEecCccCcccCC-CccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHH
Q 012238 280 DNDASSVRLFATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGAR 358 (467)
Q Consensus 280 ~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 358 (467)
++ .. ...+++.|++|.++.+| .+.||++ +.++++.++ +...........+...+.
T Consensus 193 -----p~----~~-gaDivv~S~sK~l~g~~~~~gG~vv--~~~~~l~~~------------~~~~~~~~g~~~s~~~a~ 248 (388)
T PRK07811 193 -----PL----AL-GADVVVHSTTKYIGGHSDVVGGALV--TNDEELDEA------------FAFLQNGAGAVPGPFDAY 248 (388)
T ss_pred -----ch----hh-CCcEEEecCceeecCCCCcEEEEEE--ECCHHHHHH------------HHHHHHhcCCCCCHHHHH
Confidence 11 11 23488999999998765 4568885 567776665 333322222334444433
Q ss_pred HHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 012238 359 IVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLS 396 (467)
Q Consensus 359 ~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~ 396 (467)
++...|.. +..+.++..++...+.+.|+
T Consensus 249 l~~~~L~t----------l~~R~~~~~~na~~la~~L~ 276 (388)
T PRK07811 249 LTLRGLKT----------LAVRMDRHSENAEAVAEFLA 276 (388)
T ss_pred HHHhccCc----------HHHHHHHHHHHHHHHHHHHH
Confidence 33333332 33444555566667777776
No 194
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.86 E-value=3.4e-19 Score=179.19 Aligned_cols=214 Identities=17% Similarity=0.130 Sum_probs=146.5
Q ss_pred CCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcch----HHHHhhCCC
Q 012238 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNH----KNIFNDARV 199 (467)
Q Consensus 124 ~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~----~~~~~~~G~ 199 (467)
+.....+|+++++++.... ..++ +++|+.++.++ +...+.+||+|+++.|+|... ...++..|+
T Consensus 63 ~~p~~~~le~~lA~l~g~~--------~~i~--~~sG~~Al~~~--l~~ll~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~ 130 (403)
T PRK07503 63 SNPTLALLEQRMASLEGGE--------AAVA--LASGMGAITAT--LWTLLRPGDEVIVDQTLYGCTFAFLHHGLGEFGV 130 (403)
T ss_pred CCchHHHHHHHHHHHhCCC--------cEEE--EcCHHHHHHHH--HHHHcCCCCEEEEccCccchHHHHHHHHHhhCCE
Confidence 4456889999999996532 2344 57889999987 445578999999999998653 334567898
Q ss_pred CeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCC
Q 012238 200 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 279 (467)
Q Consensus 200 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~ 279 (467)
+++.++. .|++.+++.++ +++++|++++|+||||.+.+. ++|+++|+++|+++|+|++|.......
T Consensus 131 ~v~~vd~-------~d~~~l~~~i~---~~tklV~le~p~NPtG~~~di---~~I~~la~~~gi~lIvD~a~a~~~~~~- 196 (403)
T PRK07503 131 TVRHVDL-------TDPAALKAAIS---DKTRMVYFETPANPNMRLVDI---AAVAEIAHGAGAKVVVDNTYCTPYLQR- 196 (403)
T ss_pred EEEEeCC-------CCHHHHHHhcC---ccCcEEEEeCCCCCCCeeeCH---HHHHHHHHHcCCEEEEECCCcccccCC-
Confidence 8888866 37889998887 577899999999999998875 577777999999999999987543321
Q ss_pred CCChhHHHHHHhcCCeEEEEecCccCcccCC-CccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHH
Q 012238 280 DNDASSVRLFATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGAR 358 (467)
Q Consensus 280 ~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 358 (467)
++ .. ...+++.|+||.++.+| .|.||++ .+++++++ ++.. ..........+.+.+.
T Consensus 197 -----~l----~~-g~Di~v~S~tK~l~g~gd~~gG~v~---~~~~l~~~--------l~~~--~~~~~~g~~~s~~~a~ 253 (403)
T PRK07503 197 -----PL----EL-GADLVVHSATKYLGGHGDITAGLVV---GGKALADR--------IRLE--GLKDMTGAVMSPFDAF 253 (403)
T ss_pred -----ch----hh-CCCEEEccccccccCCCceeEEEEE---cCHHHHHH--------HHhh--hHHhCcCCCCCHHHHH
Confidence 11 11 23488999999999876 5667774 77777776 3210 1122223345555544
Q ss_pred HHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 012238 359 IVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLS 396 (467)
Q Consensus 359 ~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~ 396 (467)
++..-|+ .+..+.++..++...+.+.|+
T Consensus 254 l~l~~L~----------tl~~r~~~~~~na~~~a~~L~ 281 (403)
T PRK07503 254 LLMRGLK----------TLALRMDRHCASAQAVAEWLA 281 (403)
T ss_pred HHHcCcc----------hHHHHHHHHHHHHHHHHHHHH
Confidence 4433332 133344444456666666666
No 195
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.86 E-value=8.9e-20 Score=181.27 Aligned_cols=293 Identities=16% Similarity=0.088 Sum_probs=184.1
Q ss_pred CCCCCCCCchHHHHHHHHHHHhcCC--CCcCCCC------cchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHH
Q 012238 94 RTEELQPYVLDVVKKAENLMLERGE--NKEYLPI------EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLR 165 (467)
Q Consensus 94 ~d~~~~p~~~~~v~~a~~~~~~~~~--~~~Y~~~------~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~ 165 (467)
+|.++..++++.+++++.+.+.... ...+... .-..++|+.+++++... +++|++ |+|++++++
T Consensus 2 ld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~------~~~v~~--~~g~t~a~~ 73 (353)
T TIGR03235 2 LDHNATTPIDPAVAEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEALGAD------TEEVIF--TSGATESNN 73 (353)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCC------CCeEEE--eCCHHHHHH
Confidence 4555555668999999988763211 0111111 12568899999986543 678988 999999999
Q ss_pred HHHHHHHHh--CCC-CEEEEcCCCCcch---HHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCC
Q 012238 166 LAAALIERY--FPG-AKVLISSPTWGNH---KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAH 239 (467)
Q Consensus 166 l~~~~l~~~--~~g-d~Vlv~~P~y~~~---~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~ 239 (467)
++...+... .+| +.|++....|+.+ ...++..|++++.++.+ .++.+|++.+++.++ ++++++++++++
T Consensus 74 ~~l~~l~~~~~~~g~~~vi~~~~~~~s~~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~l~~~l~---~~~~lv~~~~~~ 148 (353)
T TIGR03235 74 LAILGLARAGEQKGKKHIITSAIEHPAVLEPIRALERNGFTVTYLPVD--ESGRIDVDELADAIR---PDTLLVSIMHVN 148 (353)
T ss_pred HHHHHHHHhcccCCCCeeeEcccccHHHHHHHHHHHhcCCEEEEEccC--CCCcCCHHHHHHhCC---CCCEEEEEEccc
Confidence 873332211 256 6788887666544 34455679999999884 356799999999886 567899999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEe
Q 012238 240 NPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVV 319 (467)
Q Consensus 240 NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v 319 (467)
||||.+++. ++|+++|+++|+++++|+++. +..-..+. ....-.+++.|.+|.+|++| +|+++
T Consensus 149 n~tG~~~~~---~~I~~l~~~~~~~~ivD~a~~-~g~~~~~~---------~~~~~D~~~~s~~K~~gp~g--~g~l~-- 211 (353)
T TIGR03235 149 NETGSIQPI---REIAEVLEAHEAFFHVDAAQV-VGKITVDL---------SADRIDLISCSGHKIYGPKG--IGALV-- 211 (353)
T ss_pred CCceeccCH---HHHHHHHHHcCCEEEEEchhh-cCCccccc---------cccCCCEEEeehhhcCCCCc--eEEEE--
Confidence 999999885 577777999999999999944 22111111 11123466778899988777 68886
Q ss_pred cCCHHHHhhhhhhhHHHHHHHHHhh------ccCc-cCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 012238 320 CSSSDLAARCCEVAVIQVKSQLKRL------ARPM-YSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLF 392 (467)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~-~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~ 392 (467)
..++ .... .. +... .+.. ...++.....++..++. + +.+.+++..++++++++.+.
T Consensus 212 ~~~~-~~~~--------~~--~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~---~---~~~~~~~~~~~~~~l~~~l~ 274 (353)
T TIGR03235 212 IRKR-GKPK--------AP--LKPIMFGGGQERGLRPGTLPVHLIVGMGEAAE---I---ARRNAQAWEVKLRAMRNQLR 274 (353)
T ss_pred EccC-cccc--------cc--cCceeeCCCCcCccccCCCChHHHHHHHHHHH---H---HHhhHHHHHHHHHHHHHHHH
Confidence 2333 2211 00 1000 0001 11222222223333332 1 12346778899999999999
Q ss_pred HHhhhccCCCCCcccccCC----cceE--EecCCCHHHHHHHHHcccEEEeCC
Q 012238 393 DSLSAKDKSGKDWSFILRQ----IGMF--SFTGLNKAQSDNMTNKWHVYMTKD 439 (467)
Q Consensus 393 ~~l~~~~g~~~~~~~~~~~----~g~f--~~~~l~~~~~~~ll~~~gI~v~~g 439 (467)
+.|+ +.| ++...+. .++. ...+.+.+.+...|++ +|.+.+|
T Consensus 275 ~~l~-~~g----~~~~~~~~~~~~~i~~~~~~~~~~~~v~~~L~~-~i~v~~g 321 (353)
T TIGR03235 275 DALQ-TLG----VKLNGDPAETIPHILNFSIDGVNSEALIVNLRA-DAAVSTG 321 (353)
T ss_pred HHhc-cCC----eEEeCCcccccCCEEEEEeCCcCHHHHHHHHhC-CeEEEch
Confidence 9998 766 3443221 2222 2235666777766666 8999987
No 196
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.86 E-value=5.2e-19 Score=176.82 Aligned_cols=216 Identities=16% Similarity=0.158 Sum_probs=151.5
Q ss_pred CCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcc----hHHHHhhCCC
Q 012238 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGN----HKNIFNDARV 199 (467)
Q Consensus 124 ~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~----~~~~~~~~G~ 199 (467)
+..-..+|++.+++++.. +.+++ +++|++++.++ +...+.+||+|+++.+.|.. +...++..|+
T Consensus 52 ~~p~~~~le~~la~l~g~--------~~~~~--~~sG~~Ai~~a--l~al~~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~ 119 (380)
T TIGR01325 52 ANPTVAAFEERIAALEGA--------ERAVA--TATGMSAIQAA--LMTLLQAGDHVVASRSLFGSTVGFISEILPRFGI 119 (380)
T ss_pred CCchHHHHHHHHHHHhCC--------CcEEE--ECCHHHHHHHH--HHHHhCCCCEEEEecCCcchHHHHHHHHHHHhCC
Confidence 445578999999998643 25566 89999999987 45557799999999998864 3445677899
Q ss_pred CeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCC
Q 012238 200 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 279 (467)
Q Consensus 200 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~ 279 (467)
+++.++. .|++.+++.++ +++++|++++|+||+|.+.+. ++|.++|+++|+++|+|++|.......
T Consensus 120 ~v~~v~~-------~d~~~l~~~i~---~~tklV~le~p~np~g~~~dl---~~I~~la~~~gi~livD~a~~~~~~~~- 185 (380)
T TIGR01325 120 EVSFVDP-------TDLNAWEAAVK---PNTKLVFVETPSNPLGELVDI---AALAELAHAIGALLVVDNVFATPVLQQ- 185 (380)
T ss_pred EEEEECC-------CCHHHHHHhcC---CCceEEEEECCCCCCCeeeCH---HHHHHHHHHcCCEEEEECCCcccccCC-
Confidence 8888865 27888888886 567899999999999998875 577777999999999999987554321
Q ss_pred CCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHH
Q 012238 280 DNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARI 359 (467)
Q Consensus 280 ~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 359 (467)
++ +.+ ..+++.|+||.++.+|.++|.++ +.++++++. ++..........+...+.+
T Consensus 186 -----pl----~~g-~Divv~S~sK~l~g~g~~~gG~v--v~~~~~~~~------------l~~~~~~~g~~~~p~~a~~ 241 (380)
T TIGR01325 186 -----PL----KLG-ADVVVYSATKHIDGQGRVMGGVI--AGSEELMAE------------VAVYLRHTGPAMSPFNAWV 241 (380)
T ss_pred -----ch----hhC-CCEEEeeccceecCCCCeEEEEE--EeCHHHHHH------------HHHHHHhhCCCCCHHHHHH
Confidence 11 112 35778899999998899885543 367777776 3333332233334333333
Q ss_pred HHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 012238 360 VANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK 400 (467)
Q Consensus 360 ~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g 400 (467)
+ +..- +.+..+.++..+++..+.+.|+ +.+
T Consensus 242 ~---l~~l-------~tl~~r~~~~~~~a~~la~~L~-~~p 271 (380)
T TIGR01325 242 L---LKGL-------ETLSLRMQKQFDSALAIAEWLQ-AQP 271 (380)
T ss_pred H---Hhcc-------CcHHHHHHHHHHHHHHHHHHHH-cCC
Confidence 2 2221 2244556667777888888887 654
No 197
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.86 E-value=9.4e-19 Score=176.94 Aligned_cols=338 Identities=10% Similarity=0.017 Sum_probs=198.1
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCC-CCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCc
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 160 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~-~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~gg 160 (467)
+.+.|||..|..-..-| +.+|.|.+++.+.++... ...........++++.++++. + .+.+++ +++|
T Consensus 30 g~~~lD~~~~~~~~~~G--h~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~-------~~~~~~--~~SG 97 (400)
T PTZ00125 30 GKKYYDFLSAYSAVNQG--HCHPKILAALINQAQKLTLTSRAFYNDVLGLAEKYITDLF-G-------YDKVLP--MNSG 97 (400)
T ss_pred CCEEEEcccCHhhccCC--cCCHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHhCC-C-------CCEEEE--eCCc
Confidence 34789998774311111 236778888888764321 111111223445555555542 1 247777 8999
Q ss_pred hhHHHHHHHHHHHh--------CCCCEEEEcCCCCcchHHH-HhhCCCCeEE---eeeecC--CCCCCChhhHHHHHHcC
Q 012238 161 TGSLRLAAALIERY--------FPGAKVLISSPTWGNHKNI-FNDARVPWSE---YRYYDP--KTVGLDFEGMIADIKAA 226 (467)
Q Consensus 161 t~al~l~~~~l~~~--------~~gd~Vlv~~P~y~~~~~~-~~~~G~~~~~---v~~~~~--~~~~~d~~~l~~~l~~~ 226 (467)
++|...+..+.... ..+++|++.+-+|...... +...+..... .+.... .-...|++.+++.++.
T Consensus 98 s~A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~- 176 (400)
T PTZ00125 98 AEAGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDYNDVEALEKLLQD- 176 (400)
T ss_pred HHHHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCCCCHHHHHHHhCC-
Confidence 99999985443221 1347899888888655332 2222211100 010000 0011489999998862
Q ss_pred CCCcEEEEeCCCCCCCCCCCC-HHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccC
Q 012238 227 PGGSFILLHGCAHNPTGIDPT-PEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKN 305 (467)
Q Consensus 227 ~~~~~~i~i~~p~NPTG~~~~-~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 305 (467)
++++++++.+++||||.+++ .+.+++|.++|++||+++|+||+|.++...+ ..+.. ......++++ ++||.
T Consensus 177 -~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G---~~~~~-~~~~~~pd~~---~~sK~ 248 (400)
T PTZ00125 177 -PNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTG---KLLAH-DHEGVKPDIV---LLGKA 248 (400)
T ss_pred -CCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccc---hhhHH-HhcCCCCCEE---EEccc
Confidence 56788888889999999986 4569999999999999999999998775432 11111 1111122333 36899
Q ss_pred cccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHH
Q 012238 306 LGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIK 385 (467)
Q Consensus 306 ~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~ 385 (467)
++..++|+||++ .++++++. +.......+.+.+.+.+.++...|+.- . + ....++.+
T Consensus 249 l~~g~~~ig~v~---~~~~~~~~------------~~~~~~~~t~~~~~~~~~aa~~~l~~i--~----~--~~~~~~~~ 305 (400)
T PTZ00125 249 LSGGLYPISAVL---ANDDVMLV------------IKPGEHGSTYGGNPLACAVAVEALEVL--K----E--EKLAENAQ 305 (400)
T ss_pred ccCCCcCcEEEE---EcHHHHhh------------ccCCCCCCCCCcCHHHHHHHHHHHHHH--H----h--cCHHHHHH
Confidence 985446999995 67777776 443323333445666677665554311 0 0 01233444
Q ss_pred HHHHHHHHHhhhcc-CCCCCcccccCCcceEEecCC------C-HHHHHHHHHcccEEEeCCC----eEEec-cCChhhH
Q 012238 386 NVRQKLFDSLSAKD-KSGKDWSFILRQIGMFSFTGL------N-KAQSDNMTNKWHVYMTKDG----RISLA-GLSLAKC 452 (467)
Q Consensus 386 ~~r~~l~~~l~~~~-g~~~~~~~~~~~~g~f~~~~l------~-~~~~~~ll~~~gI~v~~gg----Ris~~-~~~~~~i 452 (467)
++.+.+.+.|+ ++ +....+....+. |.+.|+.+ + .++.+++++ +||.+.|++ ||+.. ..+++++
T Consensus 306 ~~~~~l~~~l~-~l~~~~~~~~~~~~~-g~~~~v~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~~~~lRi~~~~~~~~~~i 382 (400)
T PTZ00125 306 RLGEVFRDGLK-ELLKKSPWVKEIRGK-GLLNAIVFDHSDGVNAWDLCLKLKE-NGLLAKPTHDNIIRFAPPLVITKEQL 382 (400)
T ss_pred HHHHHHHHHHH-HHHhcCCCeEEEecc-cEEEEEEEccCcchHHHHHHHHHHH-CCeEEeecCCCEEEEECCccCCHHHH
Confidence 45555555555 43 110112223343 44544422 1 234566664 699999875 88853 3488999
Q ss_pred HHHHHHHHHHHHhc
Q 012238 453 EYLADAIIDSYHNV 466 (467)
Q Consensus 453 ~~~~~~l~~~l~~~ 466 (467)
++++++|.++++++
T Consensus 383 ~~~l~~l~~~l~~~ 396 (400)
T PTZ00125 383 DQALEIIKKVLKSF 396 (400)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998764
No 198
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.85 E-value=4.6e-19 Score=176.80 Aligned_cols=216 Identities=19% Similarity=0.128 Sum_probs=153.7
Q ss_pred CCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHH----HHhhCCC
Q 012238 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKN----IFNDARV 199 (467)
Q Consensus 124 ~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~----~~~~~G~ 199 (467)
+.....+|++.++++... +..++ +++|++|+.++ +...+.+||+|+++.++|..... .++..|+
T Consensus 38 ~~p~~~~le~~la~l~g~--------~~a~~--~~sG~~Ai~~~--l~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~ 105 (369)
T cd00614 38 GNPTVDALEKKLAALEGG--------EAALA--FSSGMAAISTV--LLALLKAGDHVVASDDLYGGTYRLFERLLPKLGI 105 (369)
T ss_pred CChhHHHHHHHHHHHHCC--------CCEEE--EcCHHHHHHHH--HHHHcCCCCEEEECCCCcchHHHHHHHHHhhcCe
Confidence 556688999999999643 24555 68899999998 45557799999999999987554 3456788
Q ss_pred CeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCC
Q 012238 200 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 279 (467)
Q Consensus 200 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~ 279 (467)
++..++. .|++.+++.++ ++++++++.+|+||||.+.+. ++|+++|+++|+++|+|++|......
T Consensus 106 ~~~~v~~-------~d~~~l~~~i~---~~~~~v~~e~~~np~g~~~dl---~~i~~la~~~g~~livD~t~~~~~~~-- 170 (369)
T cd00614 106 EVTFVDP-------DDPEALEAAIK---PETKLVYVESPTNPTLKVVDI---EAIAELAHEHGALLVVDNTFATPYLQ-- 170 (369)
T ss_pred EEEEeCC-------CCHHHHHHhcC---CCCeEEEEECCCCCCCeecCH---HHHHHHHHHcCCEEEEECCCcchhcC--
Confidence 8877765 25888888886 467899999999999998875 57777899999999999998654431
Q ss_pred CCChhHHHHHHhcCCeEEEEecCccCcccCC-CccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHH
Q 012238 280 DNDASSVRLFATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGAR 358 (467)
Q Consensus 280 ~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 358 (467)
. ++ +. ...+++.|+||.++.+| .+.||++ +.+++++++ ++..........+...+.
T Consensus 171 --~--~~----~~-g~Divv~S~tK~l~g~~~~~gG~v~--~~~~~l~~~------------l~~~~~~~g~~~~p~~a~ 227 (369)
T cd00614 171 --R--PL----EL-GADIVVHSATKYIGGHSDVIAGVVV--GSGEALIQR------------LRFLRLALGTILSPFDAW 227 (369)
T ss_pred --C--hh----hh-CCcEEEeccceeccCCCCceEEEEE--eCcHHHHHH------------HHHHHHhhCCCCCHHHHH
Confidence 1 11 11 24588999999998776 7889885 344477776 443333333345555545
Q ss_pred HHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 012238 359 IVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK 400 (467)
Q Consensus 359 ~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g 400 (467)
++...|+. +..+.++..++...+.+.|+ +.+
T Consensus 228 ~~l~~l~t----------l~~r~~~~~~na~~la~~L~-~~~ 258 (369)
T cd00614 228 LLLRGLKT----------LPLRMERHSENALKVAEFLE-KHP 258 (369)
T ss_pred HHHcCCCC----------HHHHHHHHHHHHHHHHHHHH-cCC
Confidence 44434432 33455666777788888887 654
No 199
>PLN00144 acetylornithine transaminase
Probab=99.85 E-value=8.5e-19 Score=175.30 Aligned_cols=336 Identities=14% Similarity=0.023 Sum_probs=200.8
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCch
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (467)
+...||+..|.--..-|. -.|.+.+++.+.++... + +.. ....+....+|+.+....+ .+++.+ +++|+
T Consensus 14 G~~ylD~~~g~~~~~lGh--~~p~v~~ai~~q~~~~~-~-~~~-~~~~~~~~~la~~l~~~~~----~~~v~f--~~sGs 82 (382)
T PLN00144 14 GKEYLDMAAGIAVNALGH--GDPDWVKAVAEQAGTLA-H-VSN-VYHTIPQVELAKRLVASSF----ADRVFF--CNSGT 82 (382)
T ss_pred CCEEEECCcCHHhccCCC--CCHHHHHHHHHHHHhcC-C-ccc-cccCHHHHHHHHHHHhcCC----CCeEEE--eCCcH
Confidence 347899987743111232 36788888888775421 1 111 1112233445555443211 358888 99999
Q ss_pred hHHHHHHHHHHHhCC-------------CCEEEEcCCCCcchHHHHhhCCCCe-E---EeeeecCCC--CCCChhhHHHH
Q 012238 162 GSLRLAAALIERYFP-------------GAKVLISSPTWGNHKNIFNDARVPW-S---EYRYYDPKT--VGLDFEGMIAD 222 (467)
Q Consensus 162 ~al~l~~~~l~~~~~-------------gd~Vlv~~P~y~~~~~~~~~~G~~~-~---~v~~~~~~~--~~~d~~~l~~~ 222 (467)
+|.+.+.++...... ..+|+....+|.+............ . ..|..+... .-.|++.+++.
T Consensus 83 eA~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 162 (382)
T PLN00144 83 EANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVEYGNLEAARKL 162 (382)
T ss_pred HHHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeCCCCHHHHHHh
Confidence 999998655433321 2479999988876643332221111 0 001000000 01378889888
Q ss_pred HHcCCCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEec
Q 012238 223 IKAAPGGSFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQS 301 (467)
Q Consensus 223 l~~~~~~~~~i~i~~p~NPTG~~~-~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S 301 (467)
+.. .+..++++..-+||.|... +.+.+++|.++|++||+++|+||+|.+|...+ ..++. ......++ +.+
T Consensus 163 ~~~--~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g---~~~~~-~~~~~~PD---i~t 233 (382)
T PLN00144 163 IQK--GKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTG---YLWAH-EAYGVEPD---IMT 233 (382)
T ss_pred cCC--CCeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccc---hHhhh-hhcCCCCC---EEE
Confidence 753 3444555555599944432 34459999999999999999999999886532 11111 12222233 778
Q ss_pred CccCcccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHH---HhCChhhHHHHHHHHH
Q 012238 302 YSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVAN---VVGNPALFDEWKAEME 378 (467)
Q Consensus 302 ~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~---~L~~~~~~~~~~~~l~ 378 (467)
|||.++ +|+|+||++ .++++.+. +.......+.+.+.+.+.++.+ ++.++.+ .++++
T Consensus 234 ~sK~l~-~G~pig~v~---~~~~~~~~------------~~~~~~~~T~~~~pl~~aaa~a~l~~i~~~~~----~~~~~ 293 (382)
T PLN00144 234 LAKPLA-GGLPIGAVL---VTEKVASA------------INPGDHGSTFAGGPLVCNAALAVLDKISKPGF----LASVA 293 (382)
T ss_pred eccccc-CCcceEEEE---EcHHHHhc------------cCCCCCCCCCCCCHHHHHHHHHHHHHHhhchH----HHHHH
Confidence 899998 899999995 77777776 4432233344566677777773 4443332 33344
Q ss_pred HHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceEEecCC---CHHHHHHHHHcccEEEeCCC-----eEEecc-CCh
Q 012238 379 MMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL---NKAQSDNMTNKWHVYMTKDG-----RISLAG-LSL 449 (467)
Q Consensus 379 ~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~~~g~f~~~~l---~~~~~~~ll~~~gI~v~~gg-----Ris~~~-~~~ 449 (467)
.+.+.+ ++.+.+.+. +.+. +..+. ..|+++|+.+ ...+...+++ +||.+.+++ ||+++. +++
T Consensus 294 ~~g~~l---~~~l~~~~~-~~~~---~~~vr-g~G~~~~l~l~~~~~~~~~~~~~-~Gv~i~~~~~~~~lrl~p~~~~~~ 364 (382)
T PLN00144 294 KKGEYL---RELLRRKLG-GNPH---VKEVR-GVGLLVGIQLDVPAGPLVDACRD-SGLLVLTAGKGDVVRLVPPLVISE 364 (382)
T ss_pred HHHHHH---HHHHHHHHh-hCCC---ceeee-cCceEEEEEecCccHHHHHHHHH-CCeEEeecCCCCEEEEeCCCccCH
Confidence 454444 344444444 4421 11122 3788888865 2344555554 699998864 898887 688
Q ss_pred hhHHHHHHHHHHHHHhc
Q 012238 450 AKCEYLADAIIDSYHNV 466 (467)
Q Consensus 450 ~~i~~~~~~l~~~l~~~ 466 (467)
++++.++++|.+++.++
T Consensus 365 ~~i~~~~~~l~~~l~~~ 381 (382)
T PLN00144 365 AELEQAVEILADCLPAL 381 (382)
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 99999999999998764
No 200
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.85 E-value=6.3e-19 Score=175.49 Aligned_cols=213 Identities=11% Similarity=0.049 Sum_probs=150.6
Q ss_pred CCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHH----HhhCCC
Q 012238 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI----FNDARV 199 (467)
Q Consensus 124 ~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~----~~~~G~ 199 (467)
+......|++++|++.. .+++++ ++||++++.++ +...+.+||+|+++.|+|...... ....|+
T Consensus 51 ~npt~~~Le~~lA~leg--------~e~ivv--t~gg~~Ai~~~--l~all~~Gd~Il~~~~~y~~~~~~~~~~~~~~gi 118 (388)
T PRK08861 51 GNPNRGLLEQTLSELES--------GKGAVV--TNCGTSALNLW--VSALLGPDDLIVAPHDCYGGTYRLFNTRANKGDF 118 (388)
T ss_pred CCchHHHHHHHHHHHhC--------CCeEEE--ECCHHHHHHHH--HHHHcCCCCEEEEcCCchHHHHHHHHHHHhcCCe
Confidence 55668899999999954 358888 99999999998 455578999999999999854332 234566
Q ss_pred CeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCC
Q 012238 200 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 279 (467)
Q Consensus 200 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~ 279 (467)
+++.++. .|++.+++.++ ++++++++++|+||||.+++.+ +|+++|+++|+++|+|++|.......
T Consensus 119 ~v~~vd~-------~d~e~l~~~i~---~~tklV~lesP~NPtG~v~dl~---~I~~la~~~gi~vIvDea~~~~~~~~- 184 (388)
T PRK08861 119 KVQFVDQ-------SDAAALDAALA---KKPKLILLETPSNPLVRVVDIA---ELCQKAKAVGALVAVDNTFLTPVLQK- 184 (388)
T ss_pred EEEEECC-------CCHHHHHHhcC---cCCeEEEEECCCCCCCcccCHH---HHHHHHHHcCCEEEEECCccccccCC-
Confidence 6666642 58899988886 5788999999999999999966 66777999999999999987544321
Q ss_pred CCChhHHHHHHhcCCeEEEEecCccCcccC-CCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHH
Q 012238 280 DNDASSVRLFATRGMELLVAQSYSKNLGLY-AERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGAR 358 (467)
Q Consensus 280 ~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~-G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 358 (467)
++ +.+ -.+++.|++|.++-+ +.+.|+++ +.++++.++ ++..........++....
T Consensus 185 -----pl----~~G-aDivv~S~tK~l~G~~d~~gG~i~--~~~~~~~~~------------~~~~~~~~G~~~~p~~a~ 240 (388)
T PRK08861 185 -----PL----ELG-ADFVIHSTTKYINGHSDVIGGVLI--TKTKEHAEE------------LAWWGNCIGATGTPFDSY 240 (388)
T ss_pred -----Cc----ccC-CCEEEeecceeccCCCcceeEEEE--ecHHHHHHH------------HHHHHhccCCCCChHHHH
Confidence 11 112 348899999998754 46778875 456666665 444444444455566655
Q ss_pred HHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 012238 359 IVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLS 396 (467)
Q Consensus 359 ~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~ 396 (467)
.+..-|+. +..+.++..++...+.+.|+
T Consensus 241 l~~rgl~T----------l~lR~~~~~~~a~~~a~~L~ 268 (388)
T PRK08861 241 MTLRGIRT----------LGARMRVHEESAQQILAYLQ 268 (388)
T ss_pred HHHhcCCC----------HHHHHHHHHHHHHHHHHHHH
Confidence 55444443 33444555556666777776
No 201
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.85 E-value=1.1e-18 Score=174.78 Aligned_cols=213 Identities=14% Similarity=0.093 Sum_probs=148.7
Q ss_pred CCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHH----HHhhCCC
Q 012238 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKN----IFNDARV 199 (467)
Q Consensus 124 ~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~----~~~~~G~ 199 (467)
+.....+|++.++++.. .+++++ ++||++|+.++ +...+.+||+|+++.|+|..+.. .++..|+
T Consensus 63 ~~pt~~~Le~~lA~l~g--------~~~~l~--~~sgt~Ai~~~--l~al~~~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi 130 (394)
T PRK07050 63 ATPTSLALAQRLAEIEG--------GRHALL--QPSGLAAISLV--YFGLVKAGDDVLIPDNAYGPNRDHGEWLARDFGI 130 (394)
T ss_pred CCHHHHHHHHHHHHHhC--------CCeEEE--eccHHHHHHHH--HHHHhCCCCEEEEecCCcccHHHHHHHHHHhcCe
Confidence 56667899999999853 247888 99999999998 45557899999999999998664 4567898
Q ss_pred CeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCC
Q 012238 200 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 279 (467)
Q Consensus 200 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~ 279 (467)
+++.++. .+.+.+++.++ +++++|++++|+||+|. ..++++|+++|+++|+++|+|++|.....-
T Consensus 131 ~v~~vd~-------~~~~~l~~~i~---~~tklV~le~p~Np~~~---~~di~~I~~ia~~~gi~livD~a~a~~~~~-- 195 (394)
T PRK07050 131 TVRFYDP-------LIGAGIADLIQ---PNTRLIWLEAPGSVTME---VPDVPAITAAARARGVVTAIDNTYSAGLAF-- 195 (394)
T ss_pred EEEEECC-------CCHHHHHHhcC---CCCeEEEEECCCCCCcc---HhhHHHHHHHHHHcCCEEEEECCccccccc--
Confidence 8887754 13467777776 67889999999999974 677889999999999999999998653321
Q ss_pred CCChhHHHHHHhcCCeEEEEecCccCccc-CCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHH
Q 012238 280 DNDASSVRLFATRGMELLVAQSYSKNLGL-YAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGAR 358 (467)
Q Consensus 280 ~~~~~~~~~~~~~~~~~i~~~S~SK~~~~-~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 358 (467)
. +. .. ...+++.|++|.++- .+.+.|+++ +.+++++++ ++........+.++....
T Consensus 196 --~--~l----~~-GaDi~v~S~tK~~~g~~~~~gG~v~--~~~~~~~~~------------~~~~~~~~G~~~~~~~a~ 252 (394)
T PRK07050 196 --K--PF----EH-GVDISVQALTKYQSGGSDVLMGATI--TADAELHAK------------LKLARMRLGIGVSADDCS 252 (394)
T ss_pred --C--HH----Hc-CCeEEEEECCceecCCCCeeEEEEE--ECCHHHHHH------------HHHHHHhcCCCCCHHHHH
Confidence 1 11 11 236889999999962 334578875 678887777 443333334455555544
Q ss_pred HHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 012238 359 IVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLS 396 (467)
Q Consensus 359 ~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~ 396 (467)
.+...|.+ +..+.++..++...+.+.|+
T Consensus 253 l~lr~l~t----------l~~Rl~~~~~~a~~la~~L~ 280 (394)
T PRK07050 253 LVLRGLPS----------LQVRLAAHDRSALEVAEWLK 280 (394)
T ss_pred HHHcCCCc----------HHHHHHHHHHHHHHHHHHHH
Confidence 44333332 22233334444445666665
No 202
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.85 E-value=8.8e-19 Score=175.96 Aligned_cols=213 Identities=9% Similarity=0.024 Sum_probs=149.0
Q ss_pred CCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCC----cchHHHHhhCCC
Q 012238 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTW----GNHKNIFNDARV 199 (467)
Q Consensus 124 ~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y----~~~~~~~~~~G~ 199 (467)
+.....+|++.+|++... ++.++ +++|+.|+..+ +...+.+||+|+++...| ..+...++..|+
T Consensus 68 ~~p~~~~le~~lA~l~g~--------~~al~--~~sG~~Ai~~~--l~all~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G~ 135 (403)
T PRK07810 68 GNPTVSMFEERLRLIEGA--------EACFA--TASGMSAVFTA--LGALLGAGDRLVAARSLFGSCFVVCNEILPRWGV 135 (403)
T ss_pred CCchHHHHHHHHHHHhCC--------CcEEE--ECChHHHHHHH--HHHHhCCCCEEEEccCCcchHHHHHHHHHHHcCc
Confidence 555688999999999643 25555 69999999887 455678999999988555 445566778899
Q ss_pred CeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCC
Q 012238 200 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 279 (467)
Q Consensus 200 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~ 279 (467)
+++.++. .|++.++++++ +++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|.......
T Consensus 136 ~v~~vd~-------~d~~~l~~ai~---~~tklV~~esp~Nptg~v~d---l~~I~~la~~~g~~vivD~a~a~~~~~~- 201 (403)
T PRK07810 136 ETVFVDG-------EDLSQWEEALS---VPTQAVFFETPSNPMQSLVD---IAAVSELAHAAGAKVVLDNVFATPLLQR- 201 (403)
T ss_pred EEEEECC-------CCHHHHHHhcC---cCceEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCCccccCC-
Confidence 9988864 48899999887 57889999999999999886 5577777999999999999987554321
Q ss_pred CCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecCCHHHHh-hhhhhhHHHHHHHHHhhccCccCCCchHHHH
Q 012238 280 DNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAA-RCCEVAVIQVKSQLKRLARPMYSNPPVHGAR 358 (467)
Q Consensus 280 ~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 358 (467)
++ +. ...+++.|++|.++.+|+++|.++ +.+++.+. . ++...+.....++...+.
T Consensus 202 -----~~----~~-gaDivv~S~tK~l~g~g~~~gG~v--~~~~~~~~~~------------l~~~~~~~g~~~s~~~a~ 257 (403)
T PRK07810 202 -----GL----PL-GADVVVYSGTKHIDGQGRVLGGAI--LGDREYIDGP------------VQKLMRHTGPALSAFNAW 257 (403)
T ss_pred -----hh----hc-CCcEEEccCCceecCCcCceeEEE--EeChHHHHHH------------HHHHHHHhCCCCCHHHHH
Confidence 11 11 235789999999998999984443 24554443 3 222222233456666655
Q ss_pred HHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 012238 359 IVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLS 396 (467)
Q Consensus 359 ~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~ 396 (467)
++...|+. +..+.++..++...+.+.|+
T Consensus 258 l~l~~L~t----------l~~R~~~~~~~a~~~a~~L~ 285 (403)
T PRK07810 258 VLLKGLET----------LALRVRHSNASALRIAEFLE 285 (403)
T ss_pred HHHhccCc----------HHHHHHHHHHHHHHHHHHHh
Confidence 55444432 34445555555666666776
No 203
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.85 E-value=1.3e-18 Score=173.93 Aligned_cols=213 Identities=16% Similarity=0.113 Sum_probs=146.7
Q ss_pred CCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHh---hCCCC
Q 012238 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN---DARVP 200 (467)
Q Consensus 124 ~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~---~~G~~ 200 (467)
......+|++.+|+++.. +++++ +++|+.|+.++ +...+.+||+|+++.|+|..+...++ ..|++
T Consensus 51 ~np~~~~lE~~lA~l~g~--------~~~l~--~~sG~~Ai~~~--l~~ll~~GD~Vlv~~~~y~~~~~~~~~~~~~g~~ 118 (385)
T PRK08574 51 ENPTLRPLEEALAKLEGG--------VDALA--FNSGMAAISTL--FFSLLKAGDRVVLPMEAYGTTLRLLKSLEKFGVK 118 (385)
T ss_pred CCccHHHHHHHHHHHhCC--------CcEEE--eCCHHHHHHHH--HHHHhCCCCEEEEcCCCchhHHHHHHHhhccCcE
Confidence 345688999999999643 35666 79999999987 55567899999999999998877664 45665
Q ss_pred eEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCC
Q 012238 201 WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLD 280 (467)
Q Consensus 201 ~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~ 280 (467)
++.++ +|++.+++.+++ .+++++++++|+||||.+++.+ +|+++|+++|+++|+|++|......
T Consensus 119 v~~~~--------~d~~~l~~~i~~--~~tklV~ie~p~NPtG~v~dl~---~I~~la~~~gi~livD~t~a~~~~~--- 182 (385)
T PRK08574 119 VVLAY--------PSTEDIIEAIKE--GRTKLVFIETMTNPTLKVIDVP---EVAKAAKELGAILVVDNTFATPLLY--- 182 (385)
T ss_pred EEEEC--------CCHHHHHHhcCc--cCceEEEEECCCCCCCEecCHH---HHHHHHHHcCCEEEEECCCCccccC---
Confidence 55432 467889888872 2788999999999999999855 7788899999999999997533211
Q ss_pred CChhHHHHHHhcCCeEEEEecCccCcccCCCcc-ceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHH
Q 012238 281 NDASSVRLFATRGMELLVAQSYSKNLGLYAERI-GAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARI 359 (467)
Q Consensus 281 ~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~Ri-G~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 359 (467)
. ++ .. ...+++.|+||.++.+|..+ |+++ +.++++.++ ++..........+.+....
T Consensus 183 -~--~l----~~-GaDivv~S~sK~l~g~~d~~gG~vi--~~~~~~~~~------------~~~~~~~~g~~~~p~~a~l 240 (385)
T PRK08574 183 -R--PL----RH-GADFVVHSLTKYIAGHNDVVGGVAV--AWSGEFLEE------------LWEWRRRLGTIMQPFEAYL 240 (385)
T ss_pred -C--hh----hh-CCcEEEeeCceeecCCCCceeEEEE--ECcHHHHHH------------HHHHHHhcCCCCCHHHHHH
Confidence 1 11 11 24688999999998788776 5454 577777776 3333332233444444333
Q ss_pred HHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 012238 360 VANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLS 396 (467)
Q Consensus 360 ~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~ 396 (467)
+...|.. +..+.++..++...+.+.|+
T Consensus 241 ~l~~l~t----------L~~R~~~~~~na~~la~~L~ 267 (385)
T PRK08574 241 VLRGLKT----------LEVRFERQCRNAMAIAEFLS 267 (385)
T ss_pred HHcccCc----------HHHHHHHHHHHHHHHHHHHH
Confidence 3333322 33344445556666677776
No 204
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.84 E-value=3.3e-18 Score=171.17 Aligned_cols=188 Identities=16% Similarity=0.080 Sum_probs=138.6
Q ss_pred hHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHH-hCCCCEEE
Q 012238 103 LDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER-YFPGAKVL 181 (467)
Q Consensus 103 ~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~-~~~gd~Vl 181 (467)
.+.-.+++.+.+..+. . | +.....+|++++|+++... ++++ ++|||+|+.++ +... +.+||+|+
T Consensus 13 ~~~e~~~~~~~l~~~~-~-~-~g~~~~~le~~la~~~g~~--------~~v~--~~sgt~al~la--l~al~~~~Gd~Vi 77 (379)
T PRK11658 13 GDEELAAVKEVLRSGW-I-T-TGPKNQALEQAFCQLTGNQ--------HAIA--VSSATAGMHIT--LMALGIGPGDEVI 77 (379)
T ss_pred CHHHHHHHHHHHHcCC-c-c-CCHhHHHHHHHHHHHhCCC--------eEEE--ECCHHHHHHHH--HHHcCCCCCCEEE
Confidence 4556777777775543 2 2 3346899999999997542 4666 79999999998 4444 56999999
Q ss_pred EcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhc
Q 012238 182 ISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEK 261 (467)
Q Consensus 182 v~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~ 261 (467)
++.|+|..+...+...|++++.++++ .+++.+|++.+++.++ +++++++ |+||+|...+. ++|.++|+++
T Consensus 78 v~~~~~~~~~~~~~~~G~~~v~vd~~-~~~~~~d~~~l~~~i~---~~tkav~---~~~~~G~~~d~---~~i~~~a~~~ 147 (379)
T PRK11658 78 TPSLTWVSTLNMIVLLGATPVMVDVD-RDTLMVTPEAIEAAIT---PRTKAII---PVHYAGAPADL---DAIRAIGERY 147 (379)
T ss_pred ECCCcHHHHHHHHHHcCCEEEEEecC-CCcCCcCHHHHHHhcc---cCCeEEE---EeCCCCCcCCH---HHHHHHHHHc
Confidence 99999999999999999999999984 4557799999999987 4677776 56789997765 5777779999
Q ss_pred CCeeEEeccCCC-CCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecCCHHHHhh
Q 012238 262 NHIPFFDVAYQG-FASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAAR 328 (467)
Q Consensus 262 ~~~li~Deay~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~ 328 (467)
|+++|+|+++.. ..+.+. . + -..+. .+.||++...+++.+.|+++ +.++++.++
T Consensus 148 gi~vi~D~a~a~g~~~~~~--~---~---g~~g~---~~~Sf~~~K~l~~g~GG~v~--~~~~~~~~~ 202 (379)
T PRK11658 148 GIPVIEDAAHAVGTYYKGR--H---I---GARGT---AIFSFHAIKNITCAEGGLVV--TDDDELADR 202 (379)
T ss_pred CCeEEEECCCccCCeECCe--e---c---CCCCC---EEEeCCCCCcCcccCceEEE--ECCHHHHHH
Confidence 999999999763 333211 0 1 01122 45666665556777788874 677888776
No 205
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.84 E-value=1.1e-18 Score=173.02 Aligned_cols=277 Identities=16% Similarity=0.142 Sum_probs=178.4
Q ss_pred CCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEE
Q 012238 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSE 203 (467)
Q Consensus 124 ~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~ 203 (467)
+.+...+|++++|++.. .+++++ ++||++|+.++ + ..+.+||+|+++.+.|..-...+.....+. .
T Consensus 52 ~~p~~~~le~~lA~leg--------~~~~v~--~~sG~aAi~~~--l-~~l~~GD~VI~~~~~yg~~~~~~~~~~~~~-~ 117 (364)
T PRK07269 52 KNPTRAKLEETLAAIES--------ADYALA--TSSGMSAIVLA--F-SVFPVGSKVVAVRDLYGGSFRWFNQQEKEG-R 117 (364)
T ss_pred CCccHHHHHHHHHHHhC--------CCeEEE--eCCHHHHHHHH--H-HHhCCCCEEEEecCCcCchHHHHHHHHhcC-c
Confidence 55678899999999963 347877 89999999987 3 456899999999999976555433221110 1
Q ss_pred eeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCCh
Q 012238 204 YRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDA 283 (467)
Q Consensus 204 v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~ 283 (467)
+.. .+..|++.++++++ +++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|.......
T Consensus 118 ~~~----~~~~d~~~l~~~i~---~~TklV~lesP~NPtg~~~d---i~~I~~la~~~gi~vvvD~t~~~~~~~~----- 182 (364)
T PRK07269 118 FHF----TYANTEEELIAAIE---EDTDIVYIETPTNPLMVEFD---IEKVAKLAHAKGAKVIVDNTFYSPIYQR----- 182 (364)
T ss_pred EEE----EecCCHHHHHHhcC---cCceEEEEECCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCcccccCC-----
Confidence 111 23468999999887 57889999999999998775 5577777999999999999975432221
Q ss_pred hHHHHHHhcCCeEEEEecCccCcccCCCc-cceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHH
Q 012238 284 SSVRLFATRGMELLVAQSYSKNLGLYAER-IGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVAN 362 (467)
Q Consensus 284 ~~~~~~~~~~~~~i~~~S~SK~~~~~G~R-iG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 362 (467)
++ .. .-.+++.|++|.++-+|-= .||++ +.++++.++ ++..........+.+...++..
T Consensus 183 -pl----~~-gaDivv~S~tK~l~g~~d~~gG~v~--~~~~~l~~~------------~~~~~~~~G~~~s~~~a~l~~~ 242 (364)
T PRK07269 183 -PI----EL-GADIVLHSATKYLSGHNDVLAGVVV--TNDLELYEK------------LFYNLNTTGAVLSPFDSYLLMR 242 (364)
T ss_pred -ch----hh-CCcEEEecCceeccCCCcccceEEE--eCcHHHHHH------------HHHHHHHhCCCCCHHHHHHHHc
Confidence 11 11 2348899999999755532 35653 567777776 3322222233455555555544
Q ss_pred HhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceEEecCCCHHHHHHHHHc-----------
Q 012238 363 VVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNK----------- 431 (467)
Q Consensus 363 ~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~~~g~f~~~~l~~~~~~~ll~~----------- 431 (467)
.|+. +..+.++.+++...+.+.|+ ..+.- ..-++++.||++.|.-.+.+.+.++++.
T Consensus 243 ~L~t----------L~~r~~~~~~na~~~a~~L~-~~p~v-~~v~ypg~gg~~sf~~~~~~~~~~f~~~l~~~~~~~slG 310 (364)
T PRK07269 243 GLKT----------LSLRMERSTANAQEVVAFLK-KSPAV-KEVLYTGKGGMISFKVADETRIPHILNSLKVFTFAESLG 310 (364)
T ss_pred CCCc----------HHHHHHHHHHHHHHHHHHHH-hCCCc-cEEeCCCcCcEEEEEECCHHHHHHHHHhCCcceEccCCC
Confidence 4433 44566666777777888887 54310 1223477888876652233333333322
Q ss_pred --ccEEEeCC---------------C------eEEeccCChhhHHHHHHHHHHHHH
Q 012238 432 --WHVYMTKD---------------G------RISLAGLSLAKCEYLADAIIDSYH 464 (467)
Q Consensus 432 --~gI~v~~g---------------g------Ris~~~~~~~~i~~~~~~l~~~l~ 464 (467)
..+.+.|. | |||++- |+.+.+++-|.++++
T Consensus 311 ~~~sl~~~p~~~~~~~~~~~~r~~~Gi~~~liRlsvGl---E~~~dli~dl~~al~ 363 (364)
T PRK07269 311 GVESLITYPTTQTHADIPAEVRHSYGLTDDLLRLSIGI---EDARDLIADLKQALE 363 (364)
T ss_pred CcCeEeeCCcccccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHhc
Confidence 12232231 1 999997 567777777777664
No 206
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.84 E-value=2.8e-18 Score=174.23 Aligned_cols=334 Identities=14% Similarity=0.058 Sum_probs=209.5
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCch
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (467)
+.+.+|+..|.+-..-|. .+|.|.+++.+.++... ..|.+..+..+|.+.+++.+.. .+++++ +++|+
T Consensus 49 G~~~lD~~~g~~~~~lGh--~~p~i~~a~~~~~~~~~-~~~~~~~~~~~la~~L~~~~~~-------~~~v~~--~~sGs 116 (426)
T PRK00062 49 GNEYIDYVGSWGPMILGH--AHPEVVEAVIEAAEKGL-SFGAPTELEVELAELVIELVPS-------IEMVRM--VNSGT 116 (426)
T ss_pred CCEEEEcccchhhhhcCC--CCHHHHHHHHHHHHhCC-cCCCCCHHHHHHHHHHHHhCCC-------CCEEEE--ecCHH
Confidence 458999998865222233 36788888888886643 4455667777888888877421 357888 99999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhC-C------------CCeE-----EeeeecCCCCCCChhhHHHHH
Q 012238 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDA-R------------VPWS-----EYRYYDPKTVGLDFEGMIADI 223 (467)
Q Consensus 162 ~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~-G------------~~~~-----~v~~~~~~~~~~d~~~l~~~l 223 (467)
+|++.+.++......+++|+...++|.++...+... | .... .+.. + -.|++.+++.+
T Consensus 117 eA~e~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~d~~~l~~~i 191 (426)
T PRK00062 117 EATMSAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTA--P---YNDLEAVEELF 191 (426)
T ss_pred HHHHHHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccccceEEc--C---CCCHHHHHHHH
Confidence 999998655444445679999999999876433221 1 0000 0111 1 13788998888
Q ss_pred HcCCCCcEEEEeCCCCCCCCCCCC-HHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecC
Q 012238 224 KAAPGGSFILLHGCAHNPTGIDPT-PEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSY 302 (467)
Q Consensus 224 ~~~~~~~~~i~i~~p~NPTG~~~~-~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~ 302 (467)
+..+.+..++++.....-+|.+.+ .+.+++|.++|++||+++|+||+|.++..+. .... ......++ +.+|
T Consensus 192 ~~~~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~r~g~----~~~~-~~~~~~pD---i~~~ 263 (426)
T PRK00062 192 EEYGDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGFRVAL----GGAQ-GYYGVTPD---LTTL 263 (426)
T ss_pred HhCCCcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechhccccCC----ccHH-HHhCCCcc---hHhh
Confidence 654445666666644444788876 7889999999999999999999998885432 1112 11121223 3588
Q ss_pred ccCcccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHh---hccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHH
Q 012238 303 SKNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKR---LARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEM 379 (467)
Q Consensus 303 SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~ 379 (467)
||.++ .|+++|+++ .++++++. +.. .....+.+.+.+.+.++...|+.- .+ ++..++
T Consensus 264 gK~l~-~G~p~ga~~---~~~~i~~~------------~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~--~~--~~~~~~ 323 (426)
T PRK00062 264 GKIIG-GGLPVGAFG---GRREIMEQ------------LAPLGPVYQAGTLSGNPLAMAAGLATLKLL--KE--PGFYEE 323 (426)
T ss_pred hhHhh-CCCcceeee---EHHHHHHh------------hccCCCceecccCcCCHHHHHHHHHHHHHH--hc--chHHHH
Confidence 99999 899999984 67777776 431 112223345566666666555311 00 012334
Q ss_pred HHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceEEe-cCC------------C----HHHHHHHHHcccEEEeCCC--
Q 012238 380 MAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSF-TGL------------N----KAQSDNMTNKWHVYMTKDG-- 440 (467)
Q Consensus 380 ~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~~~g~f~~-~~l------------~----~~~~~~ll~~~gI~v~~gg-- 440 (467)
.++.....++.|.+.++ +.+.. ....+.|.++.+ +.. + ..+...+++ +||++.+.+
T Consensus 324 ~~~~~~~~~~~l~~~~~-~~~~~---~~vrg~G~~~~i~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~-~Gv~v~~~~~~ 398 (426)
T PRK00062 324 LEALTKRLAEGLKEAAK-KAGIP---LTVNRVGSMFGLFFTDEPVTNYADAKKSDTERFARFFHAMLD-EGVYLAPSQFE 398 (426)
T ss_pred HHHHHHHHHHHHHHHHH-HcCCc---eEEEEecceEEEEEecCCCcchhhhccccHHHHHHHHHHHHH-CCeEeecCCcC
Confidence 44444444555555544 45531 113355665532 211 1 133445554 699998865
Q ss_pred --eEEeccCChhhHHHHHHHHHHHHHhc
Q 012238 441 --RISLAGLSLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 441 --Ris~~~~~~~~i~~~~~~l~~~l~~~ 466 (467)
++++.. +++++++++++|+++++.+
T Consensus 399 ~~~~~~~~-t~~ei~~~~~~l~~~l~~~ 425 (426)
T PRK00062 399 AGFVSAAH-TDEDIEKTLEAARKAFAAL 425 (426)
T ss_pred ceeeeccC-CHHHHHHHHHHHHHHHHhh
Confidence 777544 8999999999999998764
No 207
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.84 E-value=3.7e-18 Score=171.99 Aligned_cols=329 Identities=15% Similarity=0.107 Sum_probs=201.1
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCC--CCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCC
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE--NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 159 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~--~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g 159 (467)
+.+.|||..|..-+.-|. -.|.|.+++.+.++... ...| +..-..+|.+.++++. . .+.+.+ +++
T Consensus 34 G~~ylD~~~g~~~~~lGh--~~p~v~~a~~~~~~~~~~~~~~~-~~~~~~~la~~L~~~~-~-------~~~~~f--~~S 100 (397)
T TIGR03246 34 GKEYIDFAGGIAVNALGH--AHPELVKALIEQADKLWHIGNGY-TNEPVLRLAKKLVDAT-F-------ADKVFF--CNS 100 (397)
T ss_pred CCEEEECCcCHhhccCCC--CCHHHHHHHHHHHHhcccccCcc-CCHHHHHHHHHHHhhC-C-------CCEEEE--eCC
Confidence 458999988743223344 36888888888775421 1122 2222345556666552 1 257888 999
Q ss_pred chhHHHHHHHHHHHhC------CCCEEEEcCCCCcchH-HHHhhCCCC------------eEEeeeecCCCCCCChhhHH
Q 012238 160 GTGSLRLAAALIERYF------PGAKVLISSPTWGNHK-NIFNDARVP------------WSEYRYYDPKTVGLDFEGMI 220 (467)
Q Consensus 160 gt~al~l~~~~l~~~~------~gd~Vlv~~P~y~~~~-~~~~~~G~~------------~~~v~~~~~~~~~~d~~~l~ 220 (467)
|++|...+.++..... ..++|+..+-+|.... ..+...|.. +..++. .|++.++
T Consensus 101 GseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~ 173 (397)
T TIGR03246 101 GAEANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPY-------NDLAAAK 173 (397)
T ss_pred cHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCC-------CCHHHHH
Confidence 9999999866554332 2357888888886653 233333321 111211 4889999
Q ss_pred HHHHcCCCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEE
Q 012238 221 ADIKAAPGGSFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVA 299 (467)
Q Consensus 221 ~~l~~~~~~~~~i~i~~p~NPTG~~~-~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 299 (467)
+.+. +++.++++...+++.|... +.+.+++|.++|++||+++|+||+|.++...+ ..+....+ .-.+++
T Consensus 174 ~~l~---~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G---~~~a~~~~-gv~pDi--- 243 (397)
T TIGR03246 174 ALIS---DKTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTG---ELYAYMHY-GVTPDI--- 243 (397)
T ss_pred HHhc---cCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccc---cchhhhhc-CCCCCE---
Confidence 8886 4677777776555566543 88999999999999999999999998874332 11111111 112232
Q ss_pred ecCccCcccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHH
Q 012238 300 QSYSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEM 379 (467)
Q Consensus 300 ~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~ 379 (467)
-++||.++ .|+++||++ .++++++. +.......+.+.+.+++.++...|+.. + -++
T Consensus 244 ~t~~K~lg-gG~pigav~---~~~~i~~~------------~~~~~~~~t~~~~p~~~aaa~a~l~~~------~--~~~ 299 (397)
T TIGR03246 244 LTSAKALG-GGFPIGAML---TTTEIAAH------------LKVGTHGTTYGGNPLACAVAGKVLDLV------N--TPE 299 (397)
T ss_pred EEeehhhh-CCcceeEEE---EcHHHHHh------------ccCCCcCCCCCCCHHHHHHHHHHHHHH------h--hcc
Confidence 37899998 899999995 67777776 433222223344556666666555421 1 124
Q ss_pred HHHHHHHHHHHHHHHhhhccCCCCC-cccccCCcceEEe-c-C----CCHHHHHHHHHcccEEEeCCC----eEEec-cC
Q 012238 380 MAGRIKNVRQKLFDSLSAKDKSGKD-WSFILRQIGMFSF-T-G----LNKAQSDNMTNKWHVYMTKDG----RISLA-GL 447 (467)
Q Consensus 380 ~~~~~~~~r~~l~~~l~~~~g~~~~-~~~~~~~~g~f~~-~-~----l~~~~~~~ll~~~gI~v~~gg----Ris~~-~~ 447 (467)
..++++++.+++.+.|+ +++.... +......|.++.+ + + ....+++.+++ +||++.+.| |++.+ ..
T Consensus 300 l~~~~~~~~~~l~~~L~-~l~~~~~~~~~vrg~G~~~~i~~~~~~~~~~~~~~~~l~~-~Gv~~~~~g~~~lR~~p~~~~ 377 (397)
T TIGR03246 300 LLAGVKQRHDLFVDGLE-KINARYNVFSEIRGKGLLIGAVLTEAYQGKAKQFVNAAAE-EGVIALIAGPNVVRFAPSLVI 377 (397)
T ss_pred HHHHHHHHHHHHHHHHH-HHHhcCCCeEeeecCceEEEEEEcCchhhHHHHHHHHHHH-CCeEEeecCCCEEEEeCCCCC
Confidence 56777788888888887 6541100 2223334443322 1 1 12344556665 599987654 77432 23
Q ss_pred ChhhHHHHHHHHHHHHHhc
Q 012238 448 SLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 448 ~~~~i~~~~~~l~~~l~~~ 466 (467)
+++++++++++|.+++.++
T Consensus 378 t~~~i~~~~~~l~~~l~~~ 396 (397)
T TIGR03246 378 SDDDIDEGLARFERAIEQV 396 (397)
T ss_pred CHHHHHHHHHHHHHHHHHh
Confidence 8899999999999998764
No 208
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.83 E-value=5e-18 Score=168.91 Aligned_cols=218 Identities=13% Similarity=0.083 Sum_probs=151.3
Q ss_pred CcCCC--CcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHH---
Q 012238 120 KEYLP--IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF--- 194 (467)
Q Consensus 120 ~~Y~~--~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~--- 194 (467)
..|.. ..+..+|++++|++..+ +++++ +.||++|+..+ +.+.+.+||+|++++|.|..+...+
T Consensus 53 ~~Y~r~~npt~~~Le~~iA~le~~--------~~~~~--~~sG~~Ai~~~--l~all~~GD~Vvv~~~~Y~~t~~l~~~~ 120 (394)
T PRK09028 53 MFYGRRGTPTHFAFQAAIVELEGG--------AGTAL--YPSGAAAISNA--LLSFLKAGDHLLMVDSCYEPTRDLCDKI 120 (394)
T ss_pred ceecCCCCchHHHHHHHHHHHhCC--------CcEEE--ECCHHHHHHHH--HHHHhCCCCEEEEECCCcHHHHHHHHHh
Confidence 45655 34567999999999533 35677 89999999987 5566889999999999997776533
Q ss_pred -hhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCC
Q 012238 195 -NDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQG 273 (467)
Q Consensus 195 -~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~ 273 (467)
...|+++..++. .|.+.+++.++ ++++++++++|+||||.+ .++++|+++|+++|+++|+|++|..
T Consensus 121 l~~~Gi~v~~v~~-------~~~e~l~~~l~---~~TklV~lespsNPtg~v---~dl~~I~~la~~~g~~lvvD~t~a~ 187 (394)
T PRK09028 121 LKGFGIETTYYDP-------MIGEGIRELIR---PNTKVLFLESPGSITMEV---QDVPTLSRIAHEHDIVVMLDNTWAS 187 (394)
T ss_pred hhhcceEEEEECC-------CCHHHHHHhcC---cCceEEEEECCCCCCCcH---HHHHHHHHHHHHcCCEEEEECCccc
Confidence 457777766543 24577888776 678999999999999875 6678999999999999999999875
Q ss_pred CCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccC-CCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCC
Q 012238 274 FASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY-AERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNP 352 (467)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~-G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 352 (467)
...- . ++ +. .-.+++.|.+|.++-+ +...|++ +.++++.+. +...........
T Consensus 188 p~~~----~--Pl----~~-GaDivv~S~tK~l~Gh~d~~~G~~---~~~~~~~~~------------l~~~~~~~G~~~ 241 (394)
T PRK09028 188 PINS----R--PF----EM-GVDISIQAATKYIVGHSDVMLGTA---TANEKHWDQ------------LREHSYLMGQCT 241 (394)
T ss_pred cccC----C--cc----cc-CceEEEEeCCeEecCCCCEEEEEE---ECCHHHHHH------------HHHHHHhcCCCC
Confidence 3211 1 11 11 2468899999999545 4545654 366666555 333323334455
Q ss_pred chHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 012238 353 PVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD 399 (467)
Q Consensus 353 ~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~ 399 (467)
++.....+..-|.. +..+.++..++...+.+.|+ +.
T Consensus 242 ~p~~a~l~~rgl~T----------L~lR~~~~~~na~~la~~L~-~~ 277 (394)
T PRK09028 242 SPDDVYLAMRGLRT----------LGVRLAQHEKNALKVANWLA-TR 277 (394)
T ss_pred CHHHHHHHHcccCc----------HHHHHHHHHHHHHHHHHHHh-cC
Confidence 65555554444433 44555666677777888887 54
No 209
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.83 E-value=3.2e-18 Score=170.61 Aligned_cols=190 Identities=15% Similarity=0.085 Sum_probs=135.8
Q ss_pred chHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHH-hCCCCEE
Q 012238 102 VLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER-YFPGAKV 180 (467)
Q Consensus 102 ~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~-~~~gd~V 180 (467)
..+..++++.+.+..+...+. ..-..++.+.+++++ + .+++++ |+||++++.++ +... +.|||+|
T Consensus 9 ~~~~e~~a~~~~~~~~~~~~~--g~~~~~~e~~la~~~----g----~~~~v~--~~sgt~aL~~~--l~al~~~pGd~V 74 (376)
T TIGR02379 9 VTGQELEYIAEAISEGKLSGD--GPFSRRCETWLENRT----G----TKKALL--TPSCTAALEMA--ALLLDIQPGDEV 74 (376)
T ss_pred CCHHHHHHHHHHHHcCCccCC--cHHHHHHHHHHHHHh----C----CCeEEE--eCCHHHHHHHH--HHHcCCCCcCEE
Confidence 356667788887765432111 112345555565553 1 457888 99999999987 3433 5699999
Q ss_pred EEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHh
Q 012238 181 LISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQE 260 (467)
Q Consensus 181 lv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~ 260 (467)
++++|+|..+...+...|++++.++++ ++++.+|++.+++.++ +++++++ |+||||...+.+ +|.++|++
T Consensus 75 iv~~~t~~~~~~~~~~~G~~~v~vd~d-~~~~~~d~~~le~~i~---~~tk~Ii---p~~~~G~~~d~~---~I~~la~~ 144 (376)
T TIGR02379 75 IMPSYTFVSTANAFVLRGAKIVFVDIR-PDTMNIDETLIESAIT---HRTKAIV---PVHYAGVACDMD---TIMALANK 144 (376)
T ss_pred EECCCCcHHHHHHHHHcCCEEEEEecC-CCcCCCCHHHHHHhcC---cCceEEE---EeCCCCCccCHH---HHHHHHHH
Confidence 999999999999999999999999995 4557899999999887 4677776 578999987755 77777999
Q ss_pred cCCeeEEeccCCCCC-CCCCCCChhHHHHHHhcCCeEEEEecC--ccCcccCCCccceEEEecCCHHHHhh
Q 012238 261 KNHIPFFDVAYQGFA-SGSLDNDASSVRLFATRGMELLVAQSY--SKNLGLYAERIGAMNVVCSSSDLAAR 328 (467)
Q Consensus 261 ~~~~li~Deay~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~S~--SK~~~~~G~RiG~~~~v~~~~~~~~~ 328 (467)
+|++||+|+++.... +++. .+ ...+ .+.+.|| +|.+. +|.+.|+++ +.++++.++
T Consensus 145 ~~i~vIeDaa~~~g~~~~~~-----~~---g~~~--~~~~fSf~~~K~l~-~g~~gG~v~--~~~~~~~~~ 202 (376)
T TIGR02379 145 HQLFVIEDAAQGVMSTYKGR-----AL---GSIG--HLGTFSFHETKNYT-SGGEGGALL--INDQAFIER 202 (376)
T ss_pred CCCEEEEECccccCCccCCc-----cc---CCCC--CEEEEeCCCCCcCc-ccCCceEEE--ECCHHHHHH
Confidence 999999999977654 3221 11 0011 1223332 48886 787889985 688888887
No 210
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.83 E-value=7.5e-18 Score=168.35 Aligned_cols=325 Identities=13% Similarity=0.050 Sum_probs=191.9
Q ss_pred CCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcC-----CCCcCC----CCcchHHHHHHHHHHHhCCCCcccccCcee
Q 012238 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-----ENKEYL----PIEGLAAFNKVTAELLFGADNSVLKEQRVA 153 (467)
Q Consensus 83 ~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~-----~~~~Y~----~~~G~~~lr~aia~~l~~~~~~~~~~~~i~ 153 (467)
.+.+||+...|++.+..|.+.+.+.+++.+..... ...+.. ...-+.++|+.+|++++.. +.++
T Consensus 4 ~~~~~~~s~~YL~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~~-------~~l~ 76 (370)
T PRK05937 4 SLSIDFVTNDFLGFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGAP-------EAFI 76 (370)
T ss_pred CceEEeECCCccCCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhCCC-------eEEE
Confidence 36899999999988877776777887777763210 011111 2345789999999997542 2355
Q ss_pred eeecCCchhHHHHHHHHHHHh-CCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCC---CC
Q 012238 154 TVQGLSGTGSLRLAAALIERY-FPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP---GG 229 (467)
Q Consensus 154 ~~~t~ggt~al~l~~~~l~~~-~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~---~~ 229 (467)
+ +.|. .++.. +...+ .+||.|++..-.+......++......+.++ ..|++.+++.++... +.
T Consensus 77 ~--~sG~-~a~~~---~~~~~~~~~d~ii~d~~~H~sv~~~~~~~~~~~~~~~-------~~d~~~l~~~l~~~~~~~~~ 143 (370)
T PRK05937 77 V--PSGY-MANLG---LCAHLSSVTDYVLWDEQVHISVVYSLSVISGWHQSFR-------HNDLDHLESLLESCRQRSFG 143 (370)
T ss_pred E--CChH-HHHHH---HHHHhCCCCCEEEEEhhhhHHHHHHHHHcCCceEEec-------CCCHHHHHHHHHhhhccCCC
Confidence 5 5555 44432 23333 4677777666666666666665443333332 268999999887431 34
Q ss_pred cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccC
Q 012238 230 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY 309 (467)
Q Consensus 230 ~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~ 309 (467)
+.++++++++|+||.+.+.+ +|.++|+++|+++++||+|.....+ . +...........+..+++.||||.+|..
T Consensus 144 ~~~v~v~~v~s~~G~i~pl~---eI~~l~~~~~~~livDea~~~G~~g-~--~g~g~~~~~~~~~~~~~~~tlsK~~g~~ 217 (370)
T PRK05937 144 RIFIFVCSVYSFKGTLAPLE---QIIALSKKYHAHLIVDEAHAMGIFG-D--DGKGFCHSLGYENFYAVLVTYSKALGSM 217 (370)
T ss_pred cEEEEEecCCCCCCCccCHH---HHHHHHHHcCCEEEEECCccccccC-C--CCCchHHhhCCCCCcEEEEechhhhhcC
Confidence 56777899999999999955 6667799999999999998643332 1 1111111111112236789999999977
Q ss_pred CCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCc-cC-CCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHH
Q 012238 310 AERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPM-YS-NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNV 387 (467)
Q Consensus 310 G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~-~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~ 387 (467)
|. |.+ ..++.... +.....+. +. +.+.....++..+++ +. .+..+..++++++.
T Consensus 218 G~--~vl----~~~~~~~~------------~~~~~~~~~~s~~~~~~~~~a~~aal~---~l---~~~~~~~~~~l~~l 273 (370)
T PRK05937 218 GA--ALL----SSSEVKQD------------LMLNSPPLRYSTGLPPHLLISIQVAYD---FL---SQEGELARKQLFRL 273 (370)
T ss_pred ce--EEE----cCHHHHHH------------HHHhCCCCeecCCCCHHHHHHHHHHHH---HH---HhCcHHHHHHHHHH
Confidence 73 333 44554444 22111111 11 233333333323321 10 11123455677777
Q ss_pred HHHHHHHhhhccCCCCCcccccCCcceEEecCCCHHHHHHHHHcccEEEeCC-----C--eEEeccC-ChhhHHHHHHHH
Q 012238 388 RQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKD-----G--RISLAGL-SLAKCEYLADAI 459 (467)
Q Consensus 388 r~~l~~~l~~~~g~~~~~~~~~~~~g~f~~~~l~~~~~~~ll~~~gI~v~~g-----g--Ris~~~~-~~~~i~~~~~~l 459 (467)
++++.+.|. ..+. + .. ..+.+.+...+.+.+.++++||.+... + |||++.. +++++++++++|
T Consensus 274 ~~~l~~~l~-~~~~-~---~~----~~i~~~~~~~~~~~~~L~~~gi~v~~~~~~~~~~iRis~~~~~t~edid~l~~~L 344 (370)
T PRK05937 274 KEYFAQKFS-SAAP-G---CV----QPIFLPGISEQELYSKLVETGIRVGVVCFPTGPFLRVNLHAFNTEDEVDILVSVL 344 (370)
T ss_pred HHHHHHhcC-CCCC-C---CE----EEEEeCChhHHHHHHHHHHCCeeEEeeCCCCCCEEEEEcCCCCCHHHHHHHHHHH
Confidence 888877776 4321 0 00 112222334445555566679988632 3 9998643 779999999999
Q ss_pred HHHHHhc
Q 012238 460 IDSYHNV 466 (467)
Q Consensus 460 ~~~l~~~ 466 (467)
+++++++
T Consensus 345 ~~~~~~~ 351 (370)
T PRK05937 345 ATYLEKY 351 (370)
T ss_pred HHHHHHh
Confidence 9988754
No 211
>PLN02651 cysteine desulfurase
Probab=99.83 E-value=1.6e-18 Score=172.93 Aligned_cols=296 Identities=15% Similarity=0.060 Sum_probs=180.4
Q ss_pred cCCCCCCCCchHHHHHHHHHHHhcCCCCc------CCC--CcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHH
Q 012238 93 YRTEELQPYVLDVVKKAENLMLERGENKE------YLP--IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSL 164 (467)
Q Consensus 93 ~~d~~~~p~~~~~v~~a~~~~~~~~~~~~------Y~~--~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al 164 (467)
|+|.++..++++.+.+++.+.+....... +.. ..-..++|+.++++++.. +++|++ |.|+++++
T Consensus 2 Yld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~------~~~v~~--t~~~t~a~ 73 (364)
T PLN02651 2 YLDMQATTPIDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALIGAD------PKEIIF--TSGATESN 73 (364)
T ss_pred cccCcCCCCCCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCC------CCeEEE--eCCHHHHH
Confidence 45555666668899999988763211000 101 122567888888886543 678988 99999998
Q ss_pred HHHHHHHHH--hCCCCEEEEcCCCCcchHH---HHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCC
Q 012238 165 RLAAALIER--YFPGAKVLISSPTWGNHKN---IFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAH 239 (467)
Q Consensus 165 ~l~~~~l~~--~~~gd~Vlv~~P~y~~~~~---~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~ 239 (467)
+++...+.. ..+||+|++....|+.+.. .++..|++++.++.+ .++.+|++.+++.++ ++++++++++++
T Consensus 74 ~~~l~~~~~~~~~~g~~vl~~~~~h~s~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~l~~~i~---~~t~lv~v~~~~ 148 (364)
T PLN02651 74 NLAIKGVMHFYKDKKKHVITTQTEHKCVLDSCRHLQQEGFEVTYLPVK--SDGLVDLDELAAAIR---PDTALVSVMAVN 148 (364)
T ss_pred HHHHHHHHHhccCCCCEEEEcccccHHHHHHHHHHHhcCCEEEEEccC--CCCcCCHHHHHHhcC---CCcEEEEEECCC
Confidence 886333211 3579999999977765433 334678899999883 456789999999997 568899999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEe
Q 012238 240 NPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVV 319 (467)
Q Consensus 240 NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v 319 (467)
||||...+.+ +|.++|+++|+++++|.++. +.....+.+ ..+-.+++.|..|.+|++| +|+++
T Consensus 149 n~tG~~~~l~---~I~~~~~~~g~~~~vD~a~~-~g~~~~~~~---------~~~~D~~~~s~hK~~gp~G--~g~l~-- 211 (364)
T PLN02651 149 NEIGVIQPVE---EIGELCREKKVLFHTDAAQA-VGKIPVDVD---------DLGVDLMSISGHKIYGPKG--VGALY-- 211 (364)
T ss_pred CCceecccHH---HHHHHHHHcCCEEEEEcchh-hCCcccCcc---------cCCCCEEEechhhhCCCCc--eEEEE--
Confidence 9999998865 77777999999999999954 322111111 1123577888889766555 58775
Q ss_pred cCCHHHHhhhhhhhHHHHHHHHHh--hccCc-cCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 012238 320 CSSSDLAARCCEVAVIQVKSQLKR--LARPM-YSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLS 396 (467)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~-~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~ 396 (467)
..+ +.... +...+.. ..... ...++..+..++..+|+. +.+..+++.++.++.++++.+.|+
T Consensus 212 v~~-~~~~~--------l~p~~~g~~~~~~~~~GT~~~~~~~~l~~al~~------~~~~~~~i~~~~~~l~~~l~~~l~ 276 (364)
T PLN02651 212 VRR-RPRVR--------LEPLMSGGGQERGRRSGTENTPLVVGLGAACEL------AMKEMDYDEKHMKALRERLLNGLR 276 (364)
T ss_pred EcC-CCCCC--------CCccccCCCccCCccCCCccHHHHHHHHHHHHH------HHHhHHHHHHHHHHHHHHHHHHHH
Confidence 233 22222 0000000 00001 112333333333333321 122346677888888888888887
Q ss_pred hccCCCCCcccccC---C---cceE--EecCCCHHHHHHHHHcccEEEeC
Q 012238 397 AKDKSGKDWSFILR---Q---IGMF--SFTGLNKAQSDNMTNKWHVYMTK 438 (467)
Q Consensus 397 ~~~g~~~~~~~~~~---~---~g~f--~~~~l~~~~~~~ll~~~gI~v~~ 438 (467)
+. +++ ++.+.+ . .+.. .+.+.+.+.+...|++ |.+..
T Consensus 277 -~~-~~~-~~i~~~~~~~~~~~~i~~~~~~~~~~~~~~~~L~~--i~v~~ 321 (364)
T PLN02651 277 -AK-LGG-VRVNGPRDPEKRYPGTLNLSFAYVEGESLLMGLKE--VAVSS 321 (364)
T ss_pred -hh-CCC-EEEECCCCcccCcCCEEEEEeCCCCHHHHHHHhCC--EEEEc
Confidence 42 111 344332 1 2233 3346666665555554 77653
No 212
>PRK07505 hypothetical protein; Provisional
Probab=99.83 E-value=5.6e-18 Score=171.21 Aligned_cols=323 Identities=11% Similarity=0.063 Sum_probs=184.7
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhc-C-CCCcC----CCCcchHHHHHHHHHHHhCCCCcccccCceeee
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-G-ENKEY----LPIEGLAAFNKVTAELLFGADNSVLKEQRVATV 155 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~-~-~~~~Y----~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~ 155 (467)
+...+||+...+ -+. .-.|.|.+++.+.+.. + ..... .......++++.+++++.. +.+++
T Consensus 45 g~~~ld~~s~~~---lgl-~~~p~v~~A~~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~la~~~~~--------~~~~~- 111 (402)
T PRK07505 45 GHTFVNFVSCSY---LGL-DTHPAIIEGAVDALKRTGSLHLSSSRTRVRSQILKDLEEALSELFGA--------SVLTF- 111 (402)
T ss_pred CceEEEeecCCc---cCC-CCCHHHHHHHHHHHHHhCCCCCCccchhhhhHHHHHHHHHHHHHhCC--------CEEEE-
Confidence 347899976544 132 3367788888887753 1 11111 1233456778888877421 23434
Q ss_pred ecCCchhHHHHHHHHHHH-hCC-CC-EEEEcCCCCcchH---HHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCC
Q 012238 156 QGLSGTGSLRLAAALIER-YFP-GA-KVLISSPTWGNHK---NIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGG 229 (467)
Q Consensus 156 ~t~ggt~al~l~~~~l~~-~~~-gd-~Vlv~~P~y~~~~---~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 229 (467)
++|+++...+..+... ..+ |+ .|++.+..|..-. ......+.+++.+|. .|++.+++.++ ++
T Consensus 112 --~sG~~a~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~~~~~~~v~~~~~-------~d~~~l~~~~~---~~ 179 (402)
T PRK07505 112 --TSCSAAHLGILPLLASGHLTGGVPPHMVFDKNAHASLNILKGICADETEVETIDH-------NDLDALEDICK---TN 179 (402)
T ss_pred --CChHHHHHHHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhhhhcCCeEEEeCC-------CCHHHHHHHHh---cC
Confidence 5666777765333321 223 33 4667776554321 111223456666654 48899999886 34
Q ss_pred cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHh-cCCeEEEEecCccCccc
Q 012238 230 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT-RGMELLVAQSYSKNLGL 308 (467)
Q Consensus 230 ~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~S~SK~~~~ 308 (467)
++++++++|+||||.+.+. ++|.++|+++|+++|+||+|....++.. ........+.. ..+++++++|+||.+++
T Consensus 180 ~~~~vl~~p~~~~G~~~~~---~~i~~l~~~~~~~li~DEa~~~~~~g~~-g~~~~~~~~~~~~~d~~i~~~s~sK~~~~ 255 (402)
T PRK07505 180 KTVAYVADGVYSMGGIAPV---KELLRLQEKYGLFLYIDDAHGLSIYGKN-GEGYVRSELDYRLNERTIIAASLGKAFGA 255 (402)
T ss_pred CCEEEEEecccccCCcCCH---HHHHHHHHHcCCEEEEECcccccCcCCC-CCchHHHHcCCCCCCCeEEEEechhhhhc
Confidence 5688889999999999995 5666779999999999999754443321 11112212221 35678999999999997
Q ss_pred CCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCc-cC-CCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHH
Q 012238 309 YAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPM-YS-NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKN 386 (467)
Q Consensus 309 ~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~-~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~ 386 (467)
+| ||++ ++++++++. +.....+. ++ +++..+..++...++- .. ++.+.+..+++++
T Consensus 256 ~G---g~~~--~~~~~~~~~------------~~~~~~~~t~~~~~~~~a~aa~~a~l~~--~~---~~~~~~~~~~l~~ 313 (402)
T PRK07505 256 SG---GVIM--LGDAEQIEL------------ILRYAGPLAFSQSLNVAALGAILASAEI--HL---SEELDQLQQKLQN 313 (402)
T ss_pred cC---eEEE--eCCHHHHHH------------HHHhCCCceeCCCCCHHHHHHHHHHHHH--Hh---ccCcHHHHHHHHH
Confidence 76 8874 467777776 54443332 22 3444454554444320 00 1112334444544
Q ss_pred HHHHHHHHhhhccCCCCCcccccCCcceEEec--CC---CHHHHHHHHHcccEEEeCC-------C----eEEecc-CCh
Q 012238 387 VRQKLFDSLSAKDKSGKDWSFILRQIGMFSFT--GL---NKAQSDNMTNKWHVYMTKD-------G----RISLAG-LSL 449 (467)
Q Consensus 387 ~r~~l~~~l~~~~g~~~~~~~~~~~~g~f~~~--~l---~~~~~~~ll~~~gI~v~~g-------g----Ris~~~-~~~ 449 (467)
+...+.+.+. .. ....+.++.++ +- ..++.++|++ +||.+.++ | ||+++. .++
T Consensus 314 ~~~~~~~~~~-~~--------~~g~~~~i~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~p~~~~~~~~lRi~~~~~~t~ 383 (402)
T PRK07505 314 NIALFDSLIP-TE--------QSGSFLPIRLIYIGDEDTAIKAAKQLLD-RGFYTSPVFFPVVAKGRAGLRIMFRASHTN 383 (402)
T ss_pred HHHHHHHHHH-hc--------CCCCCCCEEEEEeCCHHHHHHHHHHHHH-CCCeEeeecCCCCCCCCceEEEecCccCCH
Confidence 4443332222 10 01111111122 21 2344566665 59999763 2 888763 388
Q ss_pred hhHHHHHHHHHHHHHh
Q 012238 450 AKCEYLADAIIDSYHN 465 (467)
Q Consensus 450 ~~i~~~~~~l~~~l~~ 465 (467)
+++++++++|++++++
T Consensus 384 eei~~~~~~l~~~l~~ 399 (402)
T PRK07505 384 DEIKRLCSLLKEILDE 399 (402)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999998864
No 213
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.83 E-value=1.2e-17 Score=169.04 Aligned_cols=342 Identities=9% Similarity=0.019 Sum_probs=196.4
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCch
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (467)
+...||+..|.--..-|. -.|.+.+++.+.++......+.. ...+....+|+.+...... ...+++++ +++|+
T Consensus 39 G~~ylD~~~g~~~~~lGh--~~p~v~~ai~~ql~~~~~~~~~~--~~~~~~~~la~~l~~~~p~-~~~~~~~f--~~sGs 111 (421)
T PRK09792 39 GNEYIDFAAGIAVLNTGH--RHPDLVAAVEQQLQQFTHTAYQI--VPYESYVTLAEKINALAPV-SGQAKTAF--FTTGA 111 (421)
T ss_pred CCEEEEccCchhhhcCCC--CCHHHHHHHHHHHHhccCcccCc--cCCHHHHHHHHHHHHhCCC-CCCceEEE--eCChH
Confidence 457899977743112232 36778888888775422122210 1112223344443322100 01247777 89999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHH-hhCCC-------------CeEEeeeecCCCCCC----ChhhHHHHH
Q 012238 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIF-NDARV-------------PWSEYRYYDPKTVGL----DFEGMIADI 223 (467)
Q Consensus 162 ~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~-~~~G~-------------~~~~v~~~~~~~~~~----d~~~l~~~l 223 (467)
+|.+.+.++........+|+....+|.+..... ...|. .+..+|+..+. .++ +++.+++.+
T Consensus 112 eA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~-~~~~~~~~~~~l~~~~ 190 (421)
T PRK09792 112 EAVENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDL-HGISTQDSLDAIERLF 190 (421)
T ss_pred HHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccc-ccccHHHHHHHHHHHH
Confidence 999998665444433358899998887653221 11111 12223331111 112 346777777
Q ss_pred Hc--CCCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEe
Q 012238 224 KA--APGGSFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQ 300 (467)
Q Consensus 224 ~~--~~~~~~~i~i~~p~NPTG~~~-~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 300 (467)
++ .+.+..++++...++|+|..+ +.+.+++|.++|++||+++|+||+|.+|...+ ..+....+ ...++ +.
T Consensus 191 ~~~~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G---~~~a~~~~-~~~pD---i~ 263 (421)
T PRK09792 191 KSDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTG---KLFAMDHY-ADKPD---LM 263 (421)
T ss_pred HhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCC---chhHHHhc-CCCCc---EE
Confidence 63 124556667777799999865 89999999999999999999999999986542 22333222 11223 57
Q ss_pred cCccCcccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHH
Q 012238 301 SYSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMM 380 (467)
Q Consensus 301 S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~ 380 (467)
+|||.++ +|+|+||++ .++++.+. +.......+.+.+.+++.++...++- +.+ .+.+++.
T Consensus 264 t~gK~l~-~G~pigav~---~~~~i~~~------------~~~~~~~~T~~gnpl~~aaa~a~l~~--l~~--~~~~~~~ 323 (421)
T PRK09792 264 TMAKSLA-GGMPLSGVV---GNANIMDA------------PAPGGLGGTYAGNPLAVAAAHAVLNI--IDK--ESLCERA 323 (421)
T ss_pred Eeehhhc-CCCceEEEE---EcHHHHhc------------cCCCCcCCCCCCCHHHHHHHHHHHHH--HHh--hhHHHHH
Confidence 8999999 899999985 77777776 33222223445666677755544421 100 1112222
Q ss_pred HHHHHHHHHHHHHHhhhccCCCCCcccccCCc-ceEEecCCC------------HHHHHHHHHcccEEEeCCC------e
Q 012238 381 AGRIKNVRQKLFDSLSAKDKSGKDWSFILRQI-GMFSFTGLN------------KAQSDNMTNKWHVYMTKDG------R 441 (467)
Q Consensus 381 ~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~~~-g~f~~~~l~------------~~~~~~ll~~~gI~v~~gg------R 441 (467)
+ .+.++.....+.+.++++. +....| |+++|+.+. ..+...+++ +||.+.+.| |
T Consensus 324 ~-~~g~~l~~~l~~l~~~~p~-----v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~l~~~~~~-~Gv~i~~~g~~~~~ir 396 (421)
T PRK09792 324 N-QLGQRLKNTLIDAKESVPA-----IAAVRGLGSMIAAEFNDPQTGEPSAAIAQKIQQRALA-QGLLLLTCGAYGNVIR 396 (421)
T ss_pred H-HHHHHHHHHHHHHHHhCCC-----cceecccceEEEEEecCCccCCcchHHHHHHHHHHHH-CCcEEeecCCCCCEEE
Confidence 2 2222222222222213331 233445 778877541 123445555 699986532 7
Q ss_pred EEecc-CChhhHHHHHHHHHHHHHh
Q 012238 442 ISLAG-LSLAKCEYLADAIIDSYHN 465 (467)
Q Consensus 442 is~~~-~~~~~i~~~~~~l~~~l~~ 465 (467)
|.++. ++++++++++++|.+++++
T Consensus 397 l~P~l~i~~~ei~~~~~~l~~~l~~ 421 (421)
T PRK09792 397 FLYPLTIPDAQFDAAMKILQDALSD 421 (421)
T ss_pred EeCCCcCCHHHHHHHHHHHHHHHhC
Confidence 87665 6899999999999998853
No 214
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.83 E-value=1.5e-17 Score=168.69 Aligned_cols=339 Identities=11% Similarity=0.027 Sum_probs=194.6
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcC--CCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCC
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEY--LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 159 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y--~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g 159 (467)
+.+.||+..|.--..-|. -.|.|.+++.+.++......+ .+..-..++-+.+++..-.. ..+++++ +++
T Consensus 32 G~~ylD~~~g~~~~~lGh--~~p~v~~a~~~ql~~~~~~~~~~~~~~~~~~la~~l~~~~p~~-----~~~~v~f--~~s 102 (420)
T TIGR00700 32 GNRLIDFASGIAVLNIGH--SHPRVVDAVRTQVAEFTHTCFMVTPYEGYVALAEKLNRIAPGS-----GPKKSVF--FNS 102 (420)
T ss_pred CCEEEECccCHHhccCCC--CCHHHHHHHHHHHHhccCccccccCChHHHHHHHHHHHhCCCC-----CCCEEEE--eCC
Confidence 457899988753112232 367888888887754322222 12222234444444442111 1257888 999
Q ss_pred chhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhh-CC--------C-----CeEEeeeecCCCC-----CC----Ch
Q 012238 160 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFND-AR--------V-----PWSEYRYYDPKTV-----GL----DF 216 (467)
Q Consensus 160 gt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~-~G--------~-----~~~~v~~~~~~~~-----~~----d~ 216 (467)
|++|.+.+.++........+|+...-+|.+....... .| . .+..++..+.... .. ++
T Consensus 103 GseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (420)
T TIGR00700 103 GAEAVENAVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGEL 182 (420)
T ss_pred cHHHHHHHHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccchhHHHHH
Confidence 9999999866654444446788888888765432221 11 1 1122222100000 01 24
Q ss_pred hhHHHHHH--cCCCCcEEEEeCCCCCCCCCCCCH-HHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcC
Q 012238 217 EGMIADIK--AAPGGSFILLHGCAHNPTGIDPTP-EQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRG 293 (467)
Q Consensus 217 ~~l~~~l~--~~~~~~~~i~i~~p~NPTG~~~~~-~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~ 293 (467)
+.+++.+. ..++....+++-.-+.-+|..++. +.+++|.++|++||+++|+||+|.+|...+ ..+....+ ...
T Consensus 183 ~~~~~~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g---~~~a~~~~-~~~ 258 (420)
T TIGR00700 183 AAARAIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTG---AMFACEHE-GPE 258 (420)
T ss_pred HHHHHHHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccc---hhHHHhhc-CCC
Confidence 56666653 223566677777667777886655 459999999999999999999999986542 12222111 112
Q ss_pred CeEEEEecCccCcccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhC---ChhhH
Q 012238 294 MELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVG---NPALF 370 (467)
Q Consensus 294 ~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~---~~~~~ 370 (467)
++ +.+|||.++ +|+|+||++ .++++++. +.......+.+.+.+++.++.+.|+ ++.+
T Consensus 259 pD---i~~lsK~l~-~G~pig~v~---~~~~i~~~------------~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~~- 318 (420)
T TIGR00700 259 PD---LITTAKSLA-DGLPLSGVT---GRAEIMDA------------PAPGGLGGTYAGNPLACAAALAVLAIIESEGL- 318 (420)
T ss_pred CC---EEEeecccc-CCcceEEEE---ecHHHHhh------------cCCCCcCCCCCcCHHHHHHHHHHHHHHHhccH-
Confidence 23 345999999 999999995 77877776 4332333344566777777765553 2211
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceEEecCC--------CHHHHHHH---HHcccEEEeCC
Q 012238 371 DEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL--------NKAQSDNM---TNKWHVYMTKD 439 (467)
Q Consensus 371 ~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~~~g~f~~~~l--------~~~~~~~l---l~~~gI~v~~g 439 (467)
.+.++++.+++ ++.+.+... .++. +..+.+. |.+.|+.+ +.++...+ +.++||.+.|+
T Consensus 319 ---~~~~~~~g~~l---~~~L~~l~~-~~~~---~~~vrg~-G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~p~ 387 (420)
T TIGR00700 319 ---IERARQIGRLV---TDRLTTLKA-VDPR---IGDVRGL-GAMIAVELVDPGTTEPDAGLAERIATAAHAAGLLLLTC 387 (420)
T ss_pred ---HHHHHHHHHHH---HHHHHHHHh-hCCC---EEEeecc-ceEEEEEEecCCCCCccHHHHHHHHHHHHHCCeEEecc
Confidence 22233333333 222322222 3321 2334455 44555422 12222222 24569999986
Q ss_pred C------eEEecc-CChhhHHHHHHHHHHHHH
Q 012238 440 G------RISLAG-LSLAKCEYLADAIIDSYH 464 (467)
Q Consensus 440 g------Ris~~~-~~~~~i~~~~~~l~~~l~ 464 (467)
+ ||+++. ++++++++++++|.++++
T Consensus 388 ~~f~~~lRl~p~l~~~~~~l~~~~~~l~~~l~ 419 (420)
T TIGR00700 388 GMFGNIIRFLPPLTIGDELLSEGLDILCAILA 419 (420)
T ss_pred CCCCCEEEEECCCCcCHHHHHHHHHHHHHHhh
Confidence 3 888764 588999999999999875
No 215
>PLN02624 ornithine-delta-aminotransferase
Probab=99.83 E-value=2.4e-17 Score=169.05 Aligned_cols=333 Identities=12% Similarity=0.067 Sum_probs=201.3
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCC-CcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCc
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGEN-KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 160 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~-~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~gg 160 (467)
+.+.|||..|.--...|. -.|.|.+++.+.++.... ..+.......+|.+.++++. + .+.+++ +++|
T Consensus 74 G~~ylD~~sg~~~~~~Gh--~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~la~~L~~~~-~-------~~~~~f--~~SG 141 (474)
T PLN02624 74 GKKYLDFLSAYSAVNQGH--CHPKIIKALTEQAEKLTLSSRAFYNDKFPEFAEYLTSMF-G-------YDMVLP--MNTG 141 (474)
T ss_pred CCEEEEcccchhcccCCC--CCHHHHHHHHHHHHhcCCcccccCCHHHHHHHHHHHhhc-C-------CCeEEE--eCCh
Confidence 357899987743111222 267888888887754211 11123344566777777763 1 247888 8999
Q ss_pred hhHHHHHHHHHHHhC-------CCC-EEEEcCCCCcchHHHHhhCCCC-------------eEEeeeecCCCCCCChhhH
Q 012238 161 TGSLRLAAALIERYF-------PGA-KVLISSPTWGNHKNIFNDARVP-------------WSEYRYYDPKTVGLDFEGM 219 (467)
Q Consensus 161 t~al~l~~~~l~~~~-------~gd-~Vlv~~P~y~~~~~~~~~~G~~-------------~~~v~~~~~~~~~~d~~~l 219 (467)
++|.+.+..+..... ++. +|+...-+|.+.....-..... +..++. .|++.+
T Consensus 142 seA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l 214 (474)
T PLN02624 142 AEGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDF-------GDLDAL 214 (474)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCC-------CCHHHH
Confidence 999999866544321 133 5777777776553222111111 111221 378899
Q ss_pred HHHHHcCCCCcEEEEeCCCCCCCCCCCCHHH-HHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEE
Q 012238 220 IADIKAAPGGSFILLHGCAHNPTGIDPTPEQ-WEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV 298 (467)
Q Consensus 220 ~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~-l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~ 298 (467)
++.++..+.+..++++..++||+|.++++++ +++|.++|++||+++|+||+|.++...+ ..+.. ......+++++
T Consensus 215 ~~~l~~~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~GrtG---~~~a~-~~~~i~pDiv~ 290 (474)
T PLN02624 215 EKIFEEDGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLARTG---KMLAC-DWEEVRPDVVI 290 (474)
T ss_pred HHHHHhCCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcCcCc---chhhH-HhcCCCCCEEE
Confidence 9988765567888999999999999988774 9999999999999999999998775432 11111 11122233333
Q ss_pred EecCccCcccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHH
Q 012238 299 AQSYSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEME 378 (467)
Q Consensus 299 ~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~ 378 (467)
+||.++..++++|+++ .++++++. +.......+.+.+.+.+.++...|+. +.+ .
T Consensus 291 ---lsK~lggG~~pigav~---~~~~i~~~------------~~~~~~~~T~~g~pl~~aaa~aaLe~--l~~------~ 344 (474)
T PLN02624 291 ---LGKALGGGVIPVSAVL---ADKDVMLC------------IKPGEHGSTFGGNPLASAVAMAALQV--VQD------E 344 (474)
T ss_pred ---ecccccCCCCcceeee---ecHHHHhH------------hccCCcCCCCCCCHHHHHHHHHHHHH--HHh------c
Confidence 6899997779999995 66666665 43333223335566677777666531 111 0
Q ss_pred HHHHHHHHHHHHHHHHhhhccC--CCCCcccccCCcceEE-ecCCC-------HHHHHHHHHcccEEEeCCC----eEEe
Q 012238 379 MMAGRIKNVRQKLFDSLSAKDK--SGKDWSFILRQIGMFS-FTGLN-------KAQSDNMTNKWHVYMTKDG----RISL 444 (467)
Q Consensus 379 ~~~~~~~~~r~~l~~~l~~~~g--~~~~~~~~~~~~g~f~-~~~l~-------~~~~~~ll~~~gI~v~~gg----Ris~ 444 (467)
...++..++.+.+.+.|+ ++. .+..+....+.|.++. +++.+ .++++.+ .++||++.+++ ||+.
T Consensus 345 ~l~~~~~~~~~~l~~~L~-~l~~~~~~~i~~vrg~G~~~~i~l~~~~~~~~~a~~~~~~L-~e~GV~v~p~~~~~lR~~p 422 (474)
T PLN02624 345 KLAERSAKLGQELRDQLQ-KIQKQFPKLIKEVRGRGLLNAVVLNSPKLGPVSAYDVCLKL-KERGLLAKPTHDTIIRLAP 422 (474)
T ss_pred hHHHHHHHHHHHHHHHHH-HHHHhCCCceEEEEeeEEEEEEEecCCCcChHHHHHHHHHH-HhCCeEEecCCCCEEEEEC
Confidence 122333344444444444 321 1111233445565553 33321 2345555 45799999875 7774
Q ss_pred c-cCChhhHHHHHHHHHHHHHh
Q 012238 445 A-GLSLAKCEYLADAIIDSYHN 465 (467)
Q Consensus 445 ~-~~~~~~i~~~~~~l~~~l~~ 465 (467)
. ..+++++++++++|++++++
T Consensus 423 ~l~~t~e~id~~l~~L~~~l~~ 444 (474)
T PLN02624 423 PLSISEDELQECSKALSDVLEH 444 (474)
T ss_pred CccCCHHHHHHHHHHHHHHHHH
Confidence 2 34889999999999998764
No 216
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.82 E-value=2.9e-17 Score=166.01 Aligned_cols=331 Identities=9% Similarity=0.050 Sum_probs=205.6
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCC-CCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCc
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 160 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~-~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~gg 160 (467)
+.+.|||..|..--..| +..|.|.+++.+.++... ........-..++.+.+++++ + .+.+++ +++|
T Consensus 36 g~~~lD~~s~~~~~~~G--h~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~-------~~~~~~--~~SG 103 (401)
T TIGR01885 36 GKRYLDFLSAYSAVNQG--HCHPKIVKALTEQAQKLTLSSRAFYNDVFGEFAEYVTKLF-G-------YDKVLP--MNTG 103 (401)
T ss_pred CCEEEEcccCHhhccCC--CCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHhhc-C-------CCEEEE--eCcc
Confidence 35789998873311112 236788888887764311 111112334566777777764 2 247777 8999
Q ss_pred hhHHHHHHHHHHHh-------CCC-CEEEEcCCCCcch-HHHHhhCCC------------CeEEeeeecCCCCCCChhhH
Q 012238 161 TGSLRLAAALIERY-------FPG-AKVLISSPTWGNH-KNIFNDARV------------PWSEYRYYDPKTVGLDFEGM 219 (467)
Q Consensus 161 t~al~l~~~~l~~~-------~~g-d~Vlv~~P~y~~~-~~~~~~~G~------------~~~~v~~~~~~~~~~d~~~l 219 (467)
++|...+..+.... .+| ++|+...-+|... ...+...|- .+..++. .|++.+
T Consensus 104 s~A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l 176 (401)
T TIGR01885 104 AEAVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIPY-------NNLEAL 176 (401)
T ss_pred HHHHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeCC-------CCHHHH
Confidence 99999985543322 233 5677777777643 333333221 1222222 378999
Q ss_pred HHHHHcCCCCcEEEEeCCCCCCCCCCCCHH-HHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEE
Q 012238 220 IADIKAAPGGSFILLHGCAHNPTGIDPTPE-QWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV 298 (467)
Q Consensus 220 ~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~-~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~ 298 (467)
++.+++.+.+..++++...++++|...+.+ .+++|.++|++||+++|+||+|.++...+ ..+.. ......++++
T Consensus 177 e~~l~~~~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~G---~~~~~-~~~~~~~di~- 251 (401)
T TIGR01885 177 EEALEDHGPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTG---KLLCV-DHENVKPDIV- 251 (401)
T ss_pred HHHHHhcCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccc---hhhHH-hhcCCCCCEE-
Confidence 998875445667888888999999988654 69999999999999999999998765432 11111 1112223444
Q ss_pred EecCccCcccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHH
Q 012238 299 AQSYSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEME 378 (467)
Q Consensus 299 ~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~ 378 (467)
.+||.++..|+|+||++ .++++++. +.......+.+.+.+.+.++..+|+.. ++ +
T Consensus 252 --~~gK~l~~g~~~ig~v~---~~~~i~~~------------~~~~~~~~t~~~~p~~~~aa~a~L~~i------~~--~ 306 (401)
T TIGR01885 252 --LLGKALSGGVYPVSAVL---ADDDVMLT------------IKPGEHGSTYGGNPLACAVAVAALEVL------EE--E 306 (401)
T ss_pred --EeeccccCCCCCcEEEE---EcHHHHhh------------ccCCCCCCCCCCCHHHHHHHHHHHHHH------Hh--c
Confidence 36799997669999995 67777776 433222223344566666766665321 11 1
Q ss_pred HHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceEE-ecCCC------HHHHHHHHHcccEEEeCCC----eEEec-c
Q 012238 379 MMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFS-FTGLN------KAQSDNMTNKWHVYMTKDG----RISLA-G 446 (467)
Q Consensus 379 ~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~~~g~f~-~~~l~------~~~~~~ll~~~gI~v~~gg----Ris~~-~ 446 (467)
...++.++..+++.+.|+ +++.+- +....+.|.++. +++.+ .++..++. ++||.+.+.+ ||+.. .
T Consensus 307 ~l~~~~~~~~~~~~~~L~-~l~~~~-~~~~~g~g~~~~i~~~~~~~~~~~~~l~~~l~-~~Gv~v~~~~~~~lRi~p~l~ 383 (401)
T TIGR01885 307 KLAENAEKLGEIFRDQLK-KLPKPI-ITEVRGRGLLNAIVIDESKTGRTAWDLCLKLK-EKGLLAKPTHGNIIRLAPPLV 383 (401)
T ss_pred cHHHHHHHHHHHHHHHHH-hccCCc-eeEEeecCeeEEEEeccCcchhHHHHHHHHHH-hCCEEEEecCCCEEEEeCCcc
Confidence 344566677888999998 775311 122345666654 34332 23455555 5699998874 77753 3
Q ss_pred CChhhHHHHHHHHHHHHH
Q 012238 447 LSLAKCEYLADAIIDSYH 464 (467)
Q Consensus 447 ~~~~~i~~~~~~l~~~l~ 464 (467)
.+++++++++++|+++++
T Consensus 384 ~t~~~i~~~l~~l~~~l~ 401 (401)
T TIGR01885 384 ITEEQLDEGLEIIKKVID 401 (401)
T ss_pred CCHHHHHHHHHHHHHHhC
Confidence 488999999999998763
No 217
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.82 E-value=1.9e-17 Score=169.17 Aligned_cols=343 Identities=13% Similarity=0.068 Sum_probs=191.5
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcC--CCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCC
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEY--LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 159 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y--~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g 159 (467)
+.+.||+..|.--..-| +-.|.|.+++.+.++....... ....-..++-+.+++..-.. . .+++.+ +++
T Consensus 53 G~~ylD~~~g~~~~~lG--h~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~la~~L~~~~p~~----~-~~~v~f--~~s 123 (451)
T PRK06918 53 GNQYIDFAGAIGTINVG--HSHPKVKEALHKQVDQYIHTGFNVMMYEPYIELAEKLAALAPGS----F-DKKVLF--LNS 123 (451)
T ss_pred CCEEEEcCCchhhcCCC--CCCHHHHHHHHHHHHhccCccccccccHHHHHHHHHHHHhCCCC----C-CCEEEE--cCC
Confidence 35789998775422223 2367788888887754321111 01222233444444442111 0 257888 999
Q ss_pred chhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhh-CCC-------------CeEEeeeecC--CCCCCC--------
Q 012238 160 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFND-ARV-------------PWSEYRYYDP--KTVGLD-------- 215 (467)
Q Consensus 160 gt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~-~G~-------------~~~~v~~~~~--~~~~~d-------- 215 (467)
|++|.+.+.++........+|+....+|.+....... .|- .+..+|..+. ...+..
T Consensus 124 GseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (451)
T PRK06918 124 GAEAVENAVKIARKYTKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFM 203 (451)
T ss_pred cHHHHHHHHHHHHHHhCCCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHH
Confidence 9999999866654444445788888888765433222 121 1122222100 001111
Q ss_pred hhhHHHHHHc--CCCCcEEEEeCCCCCCC-CCCC-CHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHh
Q 012238 216 FEGMIADIKA--APGGSFILLHGCAHNPT-GIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT 291 (467)
Q Consensus 216 ~~~l~~~l~~--~~~~~~~i~i~~p~NPT-G~~~-~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~ 291 (467)
.+.+++.+.. .+++..+++ .-|-+.+ |.++ +.+.+++|.++|++||+++|+||+|.+|...+ ..++...+ .
T Consensus 204 ~~~~~~~~~~~~~~~~iAavi-~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~g---~~~a~~~~-~ 278 (451)
T PRK06918 204 IEEFKNFFISEVAPETIAAVV-MEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFARTG---KYFAIEHF-D 278 (451)
T ss_pred HHHHHHHHHhhcCCCceEEEE-ECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCccC---ceehhHhc-C
Confidence 1223333321 123344444 4555555 6544 55669999999999999999999999997542 12222222 2
Q ss_pred cCCeEEEEecCccCcccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhH-
Q 012238 292 RGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALF- 370 (467)
Q Consensus 292 ~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~- 370 (467)
..++ +.+|||.++ +|+|+||++ .++++++. +.......+.+.+.+++.++..+|+ .+.
T Consensus 279 v~pD---i~t~sK~l~-~G~pig~v~---~~~~i~~~------------~~~~~~~~T~~g~~l~~aaa~a~l~--~i~~ 337 (451)
T PRK06918 279 VVPD---LITVSKSLG-AGVPISGVI---GRKEIMDE------------SAPGELGGTYAGSPLGCAAALAVLD--IIEK 337 (451)
T ss_pred CCCC---EEeeehhhc-CCCccEEEE---EcHHHHhc------------cCCCCcCcCCCcCHHHHHHHHHHHH--HHHH
Confidence 1123 448999999 999999995 77777776 4433333455677777777666553 110
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceEEecC-------C-CHHH---HHHHHHcccEEEeCC
Q 012238 371 DEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTG-------L-NKAQ---SDNMTNKWHVYMTKD 439 (467)
Q Consensus 371 ~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~~~g~f~~~~-------l-~~~~---~~~ll~~~gI~v~~g 439 (467)
+.+.+.++.+.+++++..+.+.+ +.+. +..+.+.|+++.|.- . +.++ +.+.+.++||.+.++
T Consensus 338 ~~~~~~~~~~g~~l~~~l~~l~~----~~~~---~~~vrg~G~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gvlv~~~ 410 (451)
T PRK06918 338 ENLNDRAIELGKVVMNRFEEMKN----KYNC---IGDVRGLGAMCAFELVQDRKTKEPDKTLTANICKEANKRGLLLLSA 410 (451)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHh----hCCC---ceeeccceeEEEEEEccCCCcCCCcHHHHHHHHHHHHHCCeEEeec
Confidence 11122233333333322222221 2221 223456678776532 1 2222 222234579999986
Q ss_pred C------eEEecc-CChhhHHHHHHHHHHHHHhc
Q 012238 440 G------RISLAG-LSLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 440 g------Ris~~~-~~~~~i~~~~~~l~~~l~~~ 466 (467)
+ ||+++. ++++++++++++|.++++++
T Consensus 411 ~~~~~~lrl~p~l~~t~~~id~~l~~l~~~l~~~ 444 (451)
T PRK06918 411 GTYGNVIRVLMPLVITDEQLEEGLTIIEESLQAC 444 (451)
T ss_pred CCCCCEEEEECCCccCHHHHHHHHHHHHHHHHHH
Confidence 3 888764 68999999999999998753
No 218
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.82 E-value=7.9e-18 Score=168.72 Aligned_cols=210 Identities=17% Similarity=0.144 Sum_probs=142.7
Q ss_pred cchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchH----HHHhhCCCCe
Q 012238 126 EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHK----NIFNDARVPW 201 (467)
Q Consensus 126 ~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~----~~~~~~G~~~ 201 (467)
.-..+|++.+|++... ++.++ +++|+.++.++ + ..+.+||+|+++.|.|+... ..++..|+++
T Consensus 54 p~~~~le~~lA~l~g~-------~~~v~---~~sG~~ai~~~--l-~~l~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v 120 (390)
T PRK08064 54 PTREALEDIIAELEGG-------TKGFA---FASGMAAISTA--F-LLLSKGDHVLISEDVYGGTYRMITEVLSRFGIEH 120 (390)
T ss_pred hhHHHHHHHHHHHhCC-------CCeEE---ECCHHHHHHHH--H-HHhCCCCEEEEccCccchHHHHHHHHHHHcCCEE
Confidence 3467899999999643 23444 47778888876 3 35779999999999997432 4556789999
Q ss_pred EEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCC
Q 012238 202 SEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDN 281 (467)
Q Consensus 202 ~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~ 281 (467)
+.++. .|++.+++.++ ++++++++++|+||||.+.+.+ +|.++|+++|+++|+|++|.......
T Consensus 121 ~~v~~-------~d~~~l~~~l~---~~tklV~l~~p~NptG~~~dl~---~I~~la~~~g~~vvvD~a~~~~~~~~--- 184 (390)
T PRK08064 121 TFVDM-------TNLEEVAQNIK---PNTKLFYVETPSNPLLKVTDIR---GVVKLAKAIGCLTFVDNTFLTPLLQK--- 184 (390)
T ss_pred EEECC-------CCHHHHHHhcC---CCceEEEEECCCCCCcEeccHH---HHHHHHHHcCCEEEEECCCCcccccC---
Confidence 98876 26888888886 5788999999999999987655 66777999999999999987654221
Q ss_pred ChhHHHHHHhcCCeEEEEecCccCccc-CCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHH
Q 012238 282 DASSVRLFATRGMELLVAQSYSKNLGL-YAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIV 360 (467)
Q Consensus 282 ~~~~~~~~~~~~~~~i~~~S~SK~~~~-~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 360 (467)
++ +. ...+++.|++|.++- +|...|+++ +.++++++. ++..........+......+
T Consensus 185 ---~~----~~-g~Divv~S~tK~~~G~~~~laG~~v--~~~~~~~~~------------l~~~~~~~g~~~~~~~a~l~ 242 (390)
T PRK08064 185 ---PL----DL-GADVVLHSATKFLAGHSDVLAGLAV--VKDEELAQK------------LYFLQNSFGAVLGVQDCWLV 242 (390)
T ss_pred ---ch----hh-CCcEEEeecceeccCCccceeEEEE--eCCHHHHHH------------HHHHHHhcCCCCCHHHHHHH
Confidence 11 11 235789999999863 345567764 467777776 55444433333333333322
Q ss_pred HHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 012238 361 ANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLS 396 (467)
Q Consensus 361 ~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~ 396 (467)
+.. + +.+..+.++..++...+.+.|+
T Consensus 243 ---~~g--l-----~tl~~R~~~~~~~a~~la~~L~ 268 (390)
T PRK08064 243 ---LRG--L-----KTLHVRLEHSSETANKIALYLQ 268 (390)
T ss_pred ---Hcc--c-----CcHHHHHHHHHHHHHHHHHHHh
Confidence 221 1 1234455555666667777776
No 219
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.82 E-value=9.9e-18 Score=169.55 Aligned_cols=158 Identities=18% Similarity=0.121 Sum_probs=124.0
Q ss_pred CCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcch----HHHHhhCCC
Q 012238 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNH----KNIFNDARV 199 (467)
Q Consensus 124 ~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~----~~~~~~~G~ 199 (467)
+..-..+|++.+|++... +..++ +++|+.|+..+ +...+.+||+|+++.|.|+.. ...++..|+
T Consensus 55 ~~p~~~~le~~lA~l~g~--------~~~v~--~~sG~~Ai~~a--l~~l~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~ 122 (418)
T TIGR01326 55 MNPTTDVLEQRIAALEGG--------VAALA--VASGQAAITYA--ILNLAQAGDNIVSSSYLYGGTYNLFKHTLKRLGI 122 (418)
T ss_pred CChhHHHHHHHHHHHhCC--------CeEEE--EccHHHHHHHH--HHHHhCCCCEEEEECCCcHHHHHHHHHHHHHcCc
Confidence 445578999999999643 24555 79999999987 555678999999999998643 345677899
Q ss_pred CeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCC
Q 012238 200 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 279 (467)
Q Consensus 200 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~ 279 (467)
+++.++. .|++.+++.++ ++++++++++|+||||.+.+. ++|+++|+++|+++|+|++|......
T Consensus 123 ~v~~v~~-------~d~~~l~~~l~---~~t~~V~le~p~NPtg~v~dl---~~I~~la~~~~i~livD~t~~~~~~~-- 187 (418)
T TIGR01326 123 EVRFVDP-------DDPEEFEKAID---ENTKAVFAETIGNPAINVPDI---EAIAEVAHAHGVPLIVDNTFATPYLC-- 187 (418)
T ss_pred EEEEECC-------CCHHHHHHhcC---cCCeEEEEECCCCCCCeecCH---HHHHHHHHHcCCEEEEECCCchhhcC--
Confidence 9888864 27899999886 567888999999999998874 57777799999999999998633211
Q ss_pred CCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEE
Q 012238 280 DNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMN 317 (467)
Q Consensus 280 ~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~ 317 (467)
. ++ .. ..++++.|+||.++.+|+|+||++
T Consensus 188 --~--~l----~~-g~Divv~S~sK~l~g~G~~lGg~v 216 (418)
T TIGR01326 188 --R--PI----DH-GADIVVHSATKYIGGHGTAIGGVI 216 (418)
T ss_pred --C--ch----hc-CCeEEEECccccccCCccceEEEE
Confidence 1 11 12 357899999999999999999996
No 220
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.82 E-value=3.3e-17 Score=165.92 Aligned_cols=341 Identities=13% Similarity=0.069 Sum_probs=207.3
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCC--CCcchHHHHHHHHHHHhCCCCcccccCceeeeecCC
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYL--PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 159 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~--~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g 159 (467)
+.+.+|+..|..-..-|. -.|.+.+++.+.++......+. +.....++-+.+++..-.. ..+++++ +++
T Consensus 39 G~~ylD~~~g~~~~~lGh--~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~la~~l~~~~p~~-----~~~~~~f--~~s 109 (421)
T PRK06777 39 GREYIDFAAGIAVLNTGH--RHPKVVAAVRQQLDQFTHTAYQIVPYASYVTLAERINALAPID-----GPAKTAF--FTT 109 (421)
T ss_pred CCEEEEcccCHHhhccCC--CCHHHHHHHHHHHhhcccccccccCChHHHHHHHHHHHhCCCC-----CCceEEE--eCC
Confidence 357899987743111122 3677888888877653212221 2222234444444442110 1357888 899
Q ss_pred chhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhh-CCCC-------------eEEeeeecCCC---CCCChhhHHHH
Q 012238 160 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFND-ARVP-------------WSEYRYYDPKT---VGLDFEGMIAD 222 (467)
Q Consensus 160 gt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~-~G~~-------------~~~v~~~~~~~---~~~d~~~l~~~ 222 (467)
|++|.+.+.++........+|+....+|.+....... .|.. +..++..+... ...+++.+++.
T Consensus 110 GseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~ 189 (421)
T PRK06777 110 GAEAVENAVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNELHGVSVEEALSSVERL 189 (421)
T ss_pred cHHHHHHHHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccccCcCHHHHHHHHHHH
Confidence 9999999866554443445788888888766433221 2210 11112211000 01235667777
Q ss_pred HHc--CCCCcEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEE
Q 012238 223 IKA--APGGSFILLHGCAHNPTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVA 299 (467)
Q Consensus 223 l~~--~~~~~~~i~i~~p~NPTG~-~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 299 (467)
+++ .+++...+++...++..|. +++.+.+++|.++|++||+++|+||+|.++...+ ..+....+ ...++++
T Consensus 190 ~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~g---~~~~~~~~-~~~pDiv-- 263 (421)
T PRK06777 190 FKADIAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTG---KLFAMEYY-DVKPDLI-- 263 (421)
T ss_pred HHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccCC---chhhhhhc-CCCCCEE--
Confidence 753 2355667777777888886 5789999999999999999999999999886542 22222111 2223433
Q ss_pred ecCccCcccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHH
Q 012238 300 QSYSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEM 379 (467)
Q Consensus 300 ~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~ 379 (467)
++||.++ +|+|+||++ .++++++. +.......+.+.+.+++.++...|+.. ++ +.
T Consensus 264 -~~sK~l~-~G~pigav~---~~~~i~~~------------~~~~~~~~T~~~~p~~~aaa~a~L~~~------~~--~~ 318 (421)
T PRK06777 264 -TMAKSLG-GGMPISAVV---GRAEVMDA------------PAPGGLGGTYAGNPLAVAAALAVLDVI------AE--EK 318 (421)
T ss_pred -eeehhhc-CCCceEEEE---EcHHHHhc------------cCCCCCCCCCCcCHHHHHHHHHHHHHH------Hh--cc
Confidence 6899999 999999995 77777776 443333334456777888887777421 11 24
Q ss_pred HHHHHHHHHHHHHHHhhhccCC--CCCcccccCCcceEEe-cCC------CHHHHHHH---HHcccEEEeCCC------e
Q 012238 380 MAGRIKNVRQKLFDSLSAKDKS--GKDWSFILRQIGMFSF-TGL------NKAQSDNM---TNKWHVYMTKDG------R 441 (467)
Q Consensus 380 ~~~~~~~~r~~l~~~l~~~~g~--~~~~~~~~~~~g~f~~-~~l------~~~~~~~l---l~~~gI~v~~gg------R 441 (467)
..++++++.+++.+.|+ ++.. | .+..+.+.|.+|.+ +.. +.++...+ +.++||++.+++ |
T Consensus 319 l~~~~~~~g~~l~~~L~-~l~~~~~-~i~~vrg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~~~~g~~lr 396 (421)
T PRK06777 319 LCQRALILGAHLVEVLE-KAKASCP-AIVDIRARGSMVAVEFNDPQTGKPSPEFTRQYQRQALEEGLLLLSCGVHGNVIR 396 (421)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHhCC-CeEEecCceEEEEEEEecCccCCccHHHHHHHHHHHHhCCeEEeecCCCCCEEE
Confidence 56667777777777776 5421 1 13345677877753 321 12232222 334699999874 7
Q ss_pred EEec-cCChhhHHHHHHHHHHHHH
Q 012238 442 ISLA-GLSLAKCEYLADAIIDSYH 464 (467)
Q Consensus 442 is~~-~~~~~~i~~~~~~l~~~l~ 464 (467)
|++. .++++++++++++|.+++.
T Consensus 397 ~~ppl~i~~~~i~~~~~~l~~~l~ 420 (421)
T PRK06777 397 FLYPLTIPDAQFSKALNILTRLLA 420 (421)
T ss_pred EeCCCCCCHHHHHHHHHHHHHHHh
Confidence 7764 3588999999999998874
No 221
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.82 E-value=2e-17 Score=164.90 Aligned_cols=212 Identities=16% Similarity=0.143 Sum_probs=142.9
Q ss_pred CCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcc-hH---HHHhhCCC
Q 012238 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGN-HK---NIFNDARV 199 (467)
Q Consensus 124 ~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~-~~---~~~~~~G~ 199 (467)
+.....+|++.+|++.... ..++ +++|+.++.++ +..+.+||+|+++.|+|+. |. ..++..|+
T Consensus 48 ~~p~~~~Le~~lA~l~g~~-------~~~~---~~sG~aai~~~---~~~l~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~ 114 (377)
T PRK07671 48 GNPTRAALEELIAVLEGGH-------AGFA---FGSGMAAITAV---MMLFSSGDHVILTDDVYGGTYRVMTKVLNRFGI 114 (377)
T ss_pred CChHHHHHHHHHHHHhCCC-------ceEE---eCCHHHHHHHH---HHHhCCCCEEEECCCccchHHHHHHHHHhcCCe
Confidence 4455788999999996432 2344 46677888765 4567899999999999984 43 23456788
Q ss_pred CeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCC
Q 012238 200 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 279 (467)
Q Consensus 200 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~ 279 (467)
+++.++. .|++.++++++ +++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|.......
T Consensus 115 ~v~~v~~-------~d~~~l~~ai~---~~tklV~le~P~NPtg~~~d---l~~I~~la~~~g~~lvvD~a~~~~~~~~- 180 (377)
T PRK07671 115 EHTFVDT-------SNLEEVEEAIR---PNTKAIYVETPTNPLLKITD---IKKISTIAKEKGLLTIVDNTFMTPYWQS- 180 (377)
T ss_pred EEEEECC-------CCHHHHHHhcC---CCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCCccccCC-
Confidence 8888764 48899999887 57889999999999999866 4567777999999999999987543321
Q ss_pred CCChhHHHHHHhcCCeEEEEecCccCcccCCC-ccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHH
Q 012238 280 DNDASSVRLFATRGMELLVAQSYSKNLGLYAE-RIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGAR 358 (467)
Q Consensus 280 ~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~-RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 358 (467)
++ .. ...+++.|+||.++.++- -.|+++ +.+++++++ +...+.......+.....
T Consensus 181 -----p~----~~-g~Divv~S~sK~l~G~~~~~~G~~v--~~~~~l~~~------------~~~~~~~~g~~~~~~~a~ 236 (377)
T PRK07671 181 -----PI----SL-GADIVLHSATKYLGGHSDVVAGLVV--VNSPELAED------------LHFVQNSTGGILGPQDSW 236 (377)
T ss_pred -----hh----hh-CCeEEEecCcccccCCccceeEEEE--eCcHHHHHH------------HHHHHHhhcCCCCHHHHH
Confidence 11 11 235889999999985543 235453 567777776 443333323334444333
Q ss_pred HHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 012238 359 IVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLS 396 (467)
Q Consensus 359 ~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~ 396 (467)
.+..-+ +.+..+.++..++...+.+.|+
T Consensus 237 l~~~~l----------~tl~~R~~~~~~na~~la~~L~ 264 (377)
T PRK07671 237 LLLRGL----------KTLGIRMEEHETNSRAIAEFLN 264 (377)
T ss_pred HHHcCc----------ChHHHHHHHHHHHHHHHHHHHH
Confidence 332222 1244455666677777777777
No 222
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.81 E-value=2e-17 Score=167.22 Aligned_cols=157 Identities=18% Similarity=0.145 Sum_probs=123.1
Q ss_pred CcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcch----HHHHhhCCCC
Q 012238 125 IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNH----KNIFNDARVP 200 (467)
Q Consensus 125 ~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~----~~~~~~~G~~ 200 (467)
..-...|.+.+|++... +..++ +++|++|+..+ +...+.+||+|+++.|.|+.. ...++..|++
T Consensus 63 ~p~~~~Le~~lA~leg~--------~~al~--~~sG~~Ai~~a--l~~ll~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~ 130 (431)
T PRK08248 63 NPTTDVFEKRIAALEGG--------IGALA--VSSGQAAITYS--ILNIASAGDEIVSSSSLYGGTYNLFAHTLPKLGIT 130 (431)
T ss_pred CchHHHHHHHHHHHhCC--------CcEEE--ECCHHHHHHHH--HHHHhCCCCEEEEccCchhhHHHHHHHHHHhCCEE
Confidence 44577899999999543 24555 79999999987 556678999999999988653 3456678999
Q ss_pred eEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCC
Q 012238 201 WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLD 280 (467)
Q Consensus 201 ~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~ 280 (467)
++.++. .|++.+++.++ ++++++++++|+||||.+.+.+ +|+++|+++|+++|+|++|..-. .
T Consensus 131 v~~vd~-------~d~e~l~~ai~---~~tklV~l~sp~NPtG~v~di~---~I~~la~~~gi~vIvD~t~a~~~-~--- 193 (431)
T PRK08248 131 VKFVDP-------SDPENFEAAIT---DKTKALFAETIGNPKGDVLDIE---AVAAIAHEHGIPLIVDNTFASPY-L--- 193 (431)
T ss_pred EEEECC-------CCHHHHHHhcC---CCCeEEEEECCCCCCCcccCHH---HHHHHHHHcCCEEEEeCCCCccc-c---
Confidence 988875 48899999887 5678888999999999999865 77777999999999999975211 1
Q ss_pred CChhHHHHHHhcCCeEEEEecCccCcccCCCccceEE
Q 012238 281 NDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMN 317 (467)
Q Consensus 281 ~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~ 317 (467)
..++ +. ...+++.|++|.++.+|.++|+++
T Consensus 194 --~~pl----~~-gaDivv~S~tK~lgg~g~~~Gg~v 223 (431)
T PRK08248 194 --LRPI----EH-GADIVVHSATKFIGGHGTSIGGVI 223 (431)
T ss_pred --CChh----Hc-CCCEEEEcCccccCCCCCceEEEE
Confidence 1111 22 345788999999999999999986
No 223
>PRK05939 hypothetical protein; Provisional
Probab=99.81 E-value=2.7e-17 Score=164.77 Aligned_cols=154 Identities=16% Similarity=0.128 Sum_probs=120.3
Q ss_pred hHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHH---HHhhCCCCeEEe
Q 012238 128 LAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKN---IFNDARVPWSEY 204 (467)
Q Consensus 128 ~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~---~~~~~G~~~~~v 204 (467)
..+|++.++++.... ..++ +.+|+.|+..+ +...+.+||+|+++++.|+.+.. .++..|++++.+
T Consensus 49 ~~~lE~~la~leg~~-------~~v~---~ssG~~Ai~~~--l~all~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v 116 (397)
T PRK05939 49 TAALEAKITKMEGGV-------GTVC---FATGMAAIAAV--FLTLLRAGDHLVSSQFLFGNTNSLFGTLRGLGVEVTMV 116 (397)
T ss_pred HHHHHHHHHHHhCCC-------eEEE---eCCHHHHHHHH--HHHHcCCCCEEEECCCccccHHHHHHHHHhcCCEEEEE
Confidence 348999999995443 2344 46779999987 55567899999999999976543 456789998888
Q ss_pred eeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChh
Q 012238 205 RYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDAS 284 (467)
Q Consensus 205 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~ 284 (467)
+. .|++.+++.++ ++++++++++|+||||.+ .++++|+++|+++|+++|+|++|..... .+..
T Consensus 117 ~~-------~d~e~l~~~l~---~~tklV~vesp~NptG~v---~dl~~I~~la~~~gi~livD~t~a~~~~----~~~~ 179 (397)
T PRK05939 117 DA-------TDVQNVAAAIR---PNTRMVFVETIANPGTQV---ADLAGIGALCRERGLLYVVDNTMTSPWL----FRPK 179 (397)
T ss_pred CC-------CCHHHHHHhCC---CCCeEEEEECCCCCCCCH---HhHHHHHHHHHHcCCEEEEECCcccccc----cCcc
Confidence 75 37899999887 678899999999999987 4577899999999999999999753221 0110
Q ss_pred HHHHHHhcCCeEEEEecCccCcccCCCccceEE
Q 012238 285 SVRLFATRGMELLVAQSYSKNLGLYAERIGAMN 317 (467)
Q Consensus 285 ~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~ 317 (467)
.....+++.|+||.++.+|.++|+++
T Consensus 180 -------~~gaDivv~S~sK~~~g~g~~igg~v 205 (397)
T PRK05939 180 -------DVGASLVINSLSKYIAGHGNALGGAV 205 (397)
T ss_pred -------ccCCEEEEecCeecccCCCCeEEEEE
Confidence 11357899999999999999999986
No 224
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.81 E-value=1.6e-17 Score=166.18 Aligned_cols=321 Identities=17% Similarity=0.141 Sum_probs=203.5
Q ss_pred CCCCCCCCchHHHHHHHHHHHhcCCC----CcCCC----CcchHHHHHHHHHHHhCCCCccccc-CceeeeecCCchhHH
Q 012238 94 RTEELQPYVLDVVKKAENLMLERGEN----KEYLP----IEGLAAFNKVTAELLFGADNSVLKE-QRVATVQGLSGTGSL 164 (467)
Q Consensus 94 ~d~~~~p~~~~~v~~a~~~~~~~~~~----~~Y~~----~~G~~~lr~aia~~l~~~~~~~~~~-~~i~~~~t~ggt~al 164 (467)
+|.++..+.|+.|.+++.+.+..... ..+.. ..-+.++|+.++++++.. + ++|++ +.|+|.++
T Consensus 3 ld~~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~------~~~~v~~--~~~~t~a~ 74 (371)
T PF00266_consen 3 LDNAGTGPMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLLGAP------PDEEVVF--TSNGTEAL 74 (371)
T ss_dssp EBTSSS-B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHTSS------TTEEEEE--ESSHHHHH
T ss_pred eeCCCccCCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcCCc------ccccccc--ccccchhh
Confidence 44555556688999999888643110 11111 234578999999998765 4 68888 99999999
Q ss_pred HHHHHHHH-HhCCCCEEEEcCCCCcchH----HHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCC
Q 012238 165 RLAAALIE-RYFPGAKVLISSPTWGNHK----NIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAH 239 (467)
Q Consensus 165 ~l~~~~l~-~~~~gd~Vlv~~P~y~~~~----~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~ 239 (467)
+.++..+. .+.+||+|++.+-.|+... .+.+..|+++..++.. .+..+|++.+++.+. +++++++++..+
T Consensus 75 ~~~~~~l~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~--~~~~~~~~~~~~~l~---~~~~lv~~~~~~ 149 (371)
T PF00266_consen 75 NAVASSLLNPLKPGDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPAD--PGGSLDLEDLEEALN---PDTRLVSISHVE 149 (371)
T ss_dssp HHHHHHHHHHGTTTCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEG--TTSSCSHHHHHHHHH---TTESEEEEESBE
T ss_pred hhhhhccccccccccccccccccccccccccccccccchhhhcccccc--ccchhhhhhhhhhhc---cccceEEeeccc
Confidence 99733321 1579999999998887554 4445789999999884 356799999999998 688899999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEe
Q 012238 240 NPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVV 319 (467)
Q Consensus 240 NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v 319 (467)
|-||..++.+ +|.++|+++|+++++|.+.. +...+.+. +...-.+++.|..|.+|.+| +|+++
T Consensus 150 ~~tG~~~pi~---~I~~~~~~~~~~~~vD~~~~-~g~~~id~---------~~~~~D~~~~s~~Kl~gp~G--~g~l~-- 212 (371)
T PF00266_consen 150 NSTGVRNPIE---EIAKLAHEYGALLVVDAAQS-AGCVPIDL---------DELGADFLVFSSHKLGGPPG--LGFLY-- 212 (371)
T ss_dssp TTTTBBSSHH---HHHHHHHHTTSEEEEE-TTT-TTTSS--T---------TTTTESEEEEESTSTTSSST--EEEEE--
T ss_pred ccccEEeeec---eehhhhhccCCceeEechhc-cccccccc---------cccccceeeecccccCCCCc--hhhhe--
Confidence 9999999866 66777999999999999943 43322221 12234577888889777777 58885
Q ss_pred cCCHHHHhhhhhh---h--HHHHHH--HH--HhhccCccC-CCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHH
Q 012238 320 CSSSDLAARCCEV---A--VIQVKS--QL--KRLARPMYS-NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQ 389 (467)
Q Consensus 320 ~~~~~~~~~~~~~---~--~~~~~~--~l--~~~~~~~~~-~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~ 389 (467)
.+++.+++ +++ + +..... .. ......... .++.....++..+++ +.. +..++++.++..+..+
T Consensus 213 -v~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~---~~~--~~g~~~i~~~~~~l~~ 285 (371)
T PF00266_consen 213 -VRPEAIER-LRPAKPGGGYLDFPSLQEYGLADDARRFEGGTPNVPAIYALNEALK---LLE--EIGIERIRERIRELAE 285 (371)
T ss_dssp -EEHHHHHH-HHTSSSSSSTTTHHHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHH---HHH--HHHHHHHHHHHHHHHH
T ss_pred -ehhhhhhc-cccccccccccccccchhcccccccccccccceeeehhhhHHHHHh---hhh--ccccccchhhhhhHHH
Confidence 45566665 111 0 000000 00 000011111 233333333333331 111 2346778888889999
Q ss_pred HHHHHhhhccCCCCCcccccC-----CcceEE--ecCCCHHHHHHHHHcccEEEeCC--------------C--eEEecc
Q 012238 390 KLFDSLSAKDKSGKDWSFILR-----QIGMFS--FTGLNKAQSDNMTNKWHVYMTKD--------------G--RISLAG 446 (467)
Q Consensus 390 ~l~~~l~~~~g~~~~~~~~~~-----~~g~f~--~~~l~~~~~~~ll~~~gI~v~~g--------------g--Ris~~~ 446 (467)
++.+.|. +++. +.+..+ .++... +.+.+.+.+.+.|++.||.+..| | |+|+..
T Consensus 286 ~~~~~l~-~~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~L~~~~I~~~~G~~~~~~~~~~~~~~~~iRvS~~~ 361 (371)
T PF00266_consen 286 YLREALE-ELPG---IEVLGPDDEPRRPSIVSFNLPGSDADDVVKYLEERGIAVSTGSACAGPSLDILGMGGVIRVSLHY 361 (371)
T ss_dssp HHHHHHH-HTTT---EEESSSSCGGBGTTEEEEEETTSSHHHHHHHHHHHTEEEEESTTTCHHHHHHHHTTTEEEEE-GT
T ss_pred HHHhhhh-cCCc---eeEeeecccccccceEEEeecCCCHHHHHHHHhhcCEEEeccCcccHHHHHHhCCCCEEEEeccC
Confidence 9999998 7653 344322 233333 34667777666666669999874 3 999876
Q ss_pred C-ChhhHHHH
Q 012238 447 L-SLAKCEYL 455 (467)
Q Consensus 447 ~-~~~~i~~~ 455 (467)
. +++|++++
T Consensus 362 ~nt~~dv~~l 371 (371)
T PF00266_consen 362 YNTEEDVDRL 371 (371)
T ss_dssp TSSHHHHHHH
T ss_pred CCCHHHHhhC
Confidence 6 55788764
No 225
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.81 E-value=3.4e-17 Score=163.83 Aligned_cols=188 Identities=16% Similarity=0.088 Sum_probs=131.0
Q ss_pred hHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHH-hCCCCEEE
Q 012238 103 LDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER-YFPGAKVL 181 (467)
Q Consensus 103 ~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~-~~~gd~Vl 181 (467)
.+.-.+++.+.+..+. .|+...-..++.+.+++++ | .+++++ ++||++|+.++ +... +.+||+|+
T Consensus 10 ~~~~~~~~~~~l~~~~--~~g~~~~~~~~e~~la~~~----g----~~~~v~--~~sgt~al~~~--l~~~~~~~Gd~Vi 75 (375)
T PRK11706 10 VGTELDYIQQAMSSGK--LCGDGGFTRRCQQWLEQRF----G----SAKVLL--TPSCTAALEMA--ALLLDIQPGDEVI 75 (375)
T ss_pred CHHHHHHHHHHHHcCC--ccCCCHHHHHHHHHHHHHh----C----CCeEEE--ECCHHHHHHHH--HHHhCCCCCCEEE
Confidence 4445666666665442 2321122344445555552 2 358888 99999999886 2323 56999999
Q ss_pred EcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhc
Q 012238 182 ISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEK 261 (467)
Q Consensus 182 v~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~ 261 (467)
++.|+|..+...++..|++++.++++ ++++.+|++.+++.++ +++++++++ ||||...+ +++|.++|+++
T Consensus 76 v~~~t~~~~~~~~~~~G~~~v~~d~d-~~~~~~d~~~le~~i~---~~tk~i~~~---~~~G~~~~---~~~i~~la~~~ 145 (375)
T PRK11706 76 MPSYTFVSTANAFVLRGAKIVFVDIR-PDTMNIDETLIEAAIT---PKTRAIVPV---HYAGVACE---MDTIMALAKKH 145 (375)
T ss_pred ECCCCcHHHHHHHHHcCCEEEEEecC-CCcCCcCHHHHHHhcC---CCCeEEEEe---CCCCCccC---HHHHHHHHHHc
Confidence 99999999999999999999999985 4467899999999987 466777754 57998765 45778889999
Q ss_pred CCeeEEeccCCCCC-CCCCCCChhHHHHHHhcCCeEEEEecCc--cCcccCCCccceEEEecCCHHHHhh
Q 012238 262 NHIPFFDVAYQGFA-SGSLDNDASSVRLFATRGMELLVAQSYS--KNLGLYAERIGAMNVVCSSSDLAAR 328 (467)
Q Consensus 262 ~~~li~Deay~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~S~S--K~~~~~G~RiG~~~~v~~~~~~~~~ 328 (467)
|++||+|++|.... +++ . ++ ... ..+.+.||. |.++ +|.+.+++ +.++++.++
T Consensus 146 ~i~vIeD~a~a~g~~~~~---~--~~---g~~--~~~~~~Sf~~~K~l~-~g~gG~~~---~~~~~~~~~ 201 (375)
T PRK11706 146 NLFVVEDAAQGVMSTYKG---R--AL---GTI--GHIGCFSFHETKNYT-AGEGGALL---INDPALIER 201 (375)
T ss_pred CCEEEEECccccccccCC---e--ee---ecC--cCEEEEeCCCCcccc-ccCCeEEE---ECCHHHHHH
Confidence 99999999987655 221 0 11 011 123444544 9997 68876676 488888876
No 226
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.80 E-value=2.4e-17 Score=169.49 Aligned_cols=342 Identities=11% Similarity=0.016 Sum_probs=198.3
Q ss_pred EEecCcccCCCCCCCCchHHHHHHHHHHH-hcCCCCcCC---CCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCch
Q 012238 86 LNLGVGAYRTEELQPYVLDVVKKAENLML-ERGENKEYL---PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (467)
Q Consensus 86 i~l~~G~~~d~~~~p~~~~~v~~a~~~~~-~~~~~~~Y~---~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (467)
--++.|.+ ...+ ++.+.+++.+.. ..+ .+.|. ...|..+++..+.+++....|.+ ++.+..+.|++
T Consensus 71 ~~~g~G~~----~~~~-~p~i~~~~~~~~~~~~-~tpYq~e~~sqG~lel~~~~~~~la~l~G~~----~~~l~~~~GA~ 140 (481)
T PRK04366 71 GFYPLGSC----TMKY-NPKINEKVARLPGFAE-LHPLQPEETVQGALELMYELQEWLKEITGMD----AVTLQPAAGAH 140 (481)
T ss_pred ceecCccc----CCCC-CHHHHHHHHhCcchhc-CCCCCChhhhhHHHHHHHHHHHHHHHHhCCC----ceEEEeCcHHH
Confidence 33677766 3444 667777766642 122 25563 45688888888888887666643 33332245555
Q ss_pred hHHHHHHHHH-HHhCCCC----EEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeC
Q 012238 162 GSLRLAAALI-ERYFPGA----KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHG 236 (467)
Q Consensus 162 ~al~l~~~~l-~~~~~gd----~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~ 236 (467)
+.+..+..+. ....+|| +|+++.|+|+.|...++..|++++.+++ +.++.+|++.+++.+. +++++++++
T Consensus 141 a~~~~l~~~r~~~~~~Gd~~~~~Vlv~~~~hp~~~~~~~~~G~~vv~v~~--~~~~~~D~e~L~~~i~---~~t~~V~v~ 215 (481)
T PRK04366 141 GELTGLLMIRAYHEARGDTKRTEVIVPDSAHGTNPASAAMAGFKVVEIPS--NEDGLVDLEALKAAVG---EDTAALMLT 215 (481)
T ss_pred HHHHHHHHHHHHhhccCcCCCCEEEEcCCccHhHHHHHHHcCCEEEEeec--CCCCCcCHHHHHhhcc---cCCeEEEEe
Confidence 5544331111 1245776 9999999999999999999999999998 3457899999999886 567888889
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccC----CCc
Q 012238 237 CAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY----AER 312 (467)
Q Consensus 237 ~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~----G~R 312 (467)
+|| |||.. ..++++|+++|+++|.++++|.++..-..+.. +. .+. .-.++++|.+|.++.| |-.
T Consensus 216 ~Pn-~tG~~--~~dl~eI~~~a~~~gal~iVD~a~~~~~~g~~--~~------~~~-GaD~~~~~~hK~l~~P~g~Ggp~ 283 (481)
T PRK04366 216 NPN-TLGLF--ERNILEIAEIVHEAGGLLYYDGANLNAILGKA--RP------GDM-GFDVVHLNLHKTFSTPHGGGGPG 283 (481)
T ss_pred CCC-Ccccc--chHHHHHHHHHHHcCCEEEEEecChhhhcccC--Cc------ccc-CCCEEEEechhhcCCCCCCCCCC
Confidence 987 99964 35689999999999999999999632111211 10 011 2357788888988754 334
Q ss_pred cceEEEecCCHHHHhhhhhhhHH---H-HHHHHH---hhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHH
Q 012238 313 IGAMNVVCSSSDLAARCCEVAVI---Q-VKSQLK---RLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIK 385 (467)
Q Consensus 313 iG~~~~v~~~~~~~~~~~~~~~~---~-~~~~l~---~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~ 385 (467)
+|++. ..+++.+.-....++ + +.-.+. .+.+.-....+.....++...+.. .-.+.+++..++..
T Consensus 284 ~G~l~---~~~~~~~~lp~~~v~~~g~~~~l~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~-----~G~~Gl~~~a~~~~ 355 (481)
T PRK04366 284 SGPVG---VKEELAPFLPVPVVEKDGDRYRLDYDRPKSIGRVRAFYGNFGVLVRAYAYIRS-----LGAEGLREVSEDAV 355 (481)
T ss_pred eeeee---ehhhhHhhCCCCeeeccCCceeecccccccCCCcccccCchHHHHHHHHHHHH-----HHHHHHHHHHHHHH
Confidence 57774 334444330000000 0 000000 000000001111221222222211 01234566667777
Q ss_pred HHHHHHHHHhhhccCCCCCcccccCCcceEEec-------CCCHHHHHHHHHcccEEEe-------CCC--eEEeccC-C
Q 012238 386 NVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFT-------GLNKAQSDNMTNKWHVYMT-------KDG--RISLAGL-S 448 (467)
Q Consensus 386 ~~r~~l~~~l~~~~g~~~~~~~~~~~~g~f~~~-------~l~~~~~~~ll~~~gI~v~-------~gg--Ris~~~~-~ 448 (467)
.+.+++.+.|+ ++ +. +.+..+...-|++- +.+.+.+.+.|.++||.+. ..+ |++++.. +
T Consensus 356 ~~a~~l~~~L~-~~-~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~L~~~Gi~~~~~~~p~~~~~~l~is~~e~~t 431 (481)
T PRK04366 356 LNANYLKARLK-DI-YD--LPYDRPCMHEFVLSGKKLKETGVRTLDIAKRLLDYGFHPPTIYFPLIVPEALMIEPTETES 431 (481)
T ss_pred HHHHHHHHHhH-hh-Cc--ccCCCCeeEEEEEECccccccCCCHHHHHHHHHHCCccCCccccccccCCeEEEcccCCCC
Confidence 77888888888 64 10 12111111112221 2344444444445698864 123 7877543 6
Q ss_pred hhhHHHHHHHHHHHHHhc
Q 012238 449 LAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 449 ~~~i~~~~~~l~~~l~~~ 466 (467)
++++++++++|.++.+++
T Consensus 432 ~edid~l~~~l~~i~~~~ 449 (481)
T PRK04366 432 KETLDAFIAAMKQIAEEA 449 (481)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 799999999999987653
No 227
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.80 E-value=1.9e-17 Score=165.23 Aligned_cols=162 Identities=16% Similarity=0.161 Sum_probs=121.3
Q ss_pred hHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHH----HHhhCCCCeEE
Q 012238 128 LAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKN----IFNDARVPWSE 203 (467)
Q Consensus 128 ~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~----~~~~~G~~~~~ 203 (467)
..+|++.++++++. +++++ +++|+.++.++ +..+.+||+|+++.+.|..+.. .++..|++++.
T Consensus 49 ~~~le~~la~l~g~--------~~~l~--~~sG~~al~~~---l~ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~ 115 (378)
T TIGR01329 49 RTALESLLAKLDKA--------DRAFA--FSSGMAALDVI---TRLLNNGDEIIAGDDLYGGTDRLLTQVVPRSGVVVVH 115 (378)
T ss_pred HHHHHHHHHHHhCC--------CcEEE--ECCHHHHHHHH---HHHhCCCCEEEEcCCCchHHHHHHHHHHHHcCcEEEE
Confidence 67888888888543 34555 57788888875 3457899999999999987654 34568999998
Q ss_pred eeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCCh
Q 012238 204 YRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDA 283 (467)
Q Consensus 204 v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~ 283 (467)
++. .|++.+++.++ ++++++++++|+||||.+.+ +++|+++|+++|+++|+|++|......
T Consensus 116 vd~-------~d~~~le~~i~---~~tklv~le~psnptg~v~d---l~~I~~la~~~g~~vivD~a~~~~~~~------ 176 (378)
T TIGR01329 116 VDT-------TDLDKVKAALG---PKTKLVLLESPTNPLQKIVD---IRKISEMAHAQNALVVVDNTMMSPLLC------ 176 (378)
T ss_pred eCC-------CCHHHHHHhcC---cCceEEEEECCCCCCCeeec---HHHHHHHHHHcCCEEEEECCCcccccC------
Confidence 876 37899999887 67889999999999999887 557788899999999999996432211
Q ss_pred hHHHHHHhcCCeEEEEecCccCcccC-CCccceEEEecCCHHHHhh
Q 012238 284 SSVRLFATRGMELLVAQSYSKNLGLY-AERIGAMNVVCSSSDLAAR 328 (467)
Q Consensus 284 ~~~~~~~~~~~~~i~~~S~SK~~~~~-G~RiG~~~~v~~~~~~~~~ 328 (467)
.++ +.+ -.+++.|++|.++-+ |.+.|+++ +.++++.++
T Consensus 177 ~~l----~~g-~Di~v~S~tK~l~G~~~~~~G~v~--~~~~~~~~~ 215 (378)
T TIGR01329 177 NPL----ELG-ADIVYHSATKFLAGHSDVMAGVLA--VKGEEIAKK 215 (378)
T ss_pred Chh----hcC-CcEEEEecceeccCCccceeEEEE--eCcHHHHHH
Confidence 111 112 358899999988643 57789885 456666565
No 228
>PLN02509 cystathionine beta-lyase
Probab=99.80 E-value=3.5e-17 Score=165.72 Aligned_cols=221 Identities=14% Similarity=0.123 Sum_probs=142.3
Q ss_pred CcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHH----HHh
Q 012238 120 KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKN----IFN 195 (467)
Q Consensus 120 ~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~----~~~ 195 (467)
+.|... |.+ .++++.+++....+ .++.++ +++|++++.++ +..+.+||+|+++.|.|..+.. .+.
T Consensus 125 ~~Y~r~-gnp-t~~aLE~~lA~leg----~e~ai~--~~SG~aAi~~i---l~ll~~GD~VI~~~~~y~~t~~ll~~~l~ 193 (464)
T PLN02509 125 YDYTRS-GNP-TRDALESLLAKLDK----ADRAFC--FTSGMAALSAV---THLIKNGEEIVAGDDVYGGSDRLLSQVVP 193 (464)
T ss_pred CccCCC-CCH-HHHHHHHHHHHHhC----CCEEEE--eCcHHHHHHHH---HHHhCCCCEEEEcCCchhhHHHHHHHHHH
Confidence 567543 543 34444444333221 345555 68888888765 4457899999999999998763 345
Q ss_pred hCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCC
Q 012238 196 DARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFA 275 (467)
Q Consensus 196 ~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~ 275 (467)
..|++++.++. .|++.+++.++ +++++|++++|+||||.+ .++++|+++|+++|+++|+|++|....
T Consensus 194 ~~G~~v~~vd~-------~d~e~l~~ai~---~~TklV~lesPsNPtG~i---~Dl~~I~~lAk~~g~~lIVD~A~a~~~ 260 (464)
T PLN02509 194 RSGVVVKRVNT-------TNLDEVAAAIG---PQTKLVWLESPTNPRQQI---SDIRKIAEMAHAQGALVLVDNSIMSPV 260 (464)
T ss_pred HCCeEEEEeCC-------CCHHHHHHhCC---cCCeEEEEECCCCCCCCH---HHHHHHHHHHHHcCCEEEEECCccccc
Confidence 77988887754 47888888886 678899999999999985 668888999999999999999975433
Q ss_pred CCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchH
Q 012238 276 SGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVH 355 (467)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 355 (467)
.+. ++ .. ...+++.|++|.++-+|--+|.++ ++.++.+.+. +...+.......+.+
T Consensus 261 ~~~------pl----~~-gaDivv~S~tK~l~G~gdv~gG~v-~~~~~~l~~~------------~~~~~~~~g~~l~p~ 316 (464)
T PLN02509 261 LSR------PL----EL-GADIVMHSATKFIAGHSDVMAGVL-AVKGEKLAKE------------VYFLQNSEGSGLAPF 316 (464)
T ss_pred cCC------hh----hc-CCcEEEecCcccccCCCccceeEE-EeccHHHHHH------------HHHHHHhcCCCcCHH
Confidence 221 11 11 235889999999876554334433 1345554444 222222112223433
Q ss_pred HHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 012238 356 GARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD 399 (467)
Q Consensus 356 ~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~ 399 (467)
...++..-| +.+..+.++..++...+.+.|+ +.
T Consensus 317 ~A~l~lr~L----------~tL~~R~~r~~~nA~~la~~L~-~~ 349 (464)
T PLN02509 317 DCWLCLRGI----------KTMALRIEKQQENARKIAMYLS-SH 349 (464)
T ss_pred HHHHHHhhh----------hhHHHHHHHHHHHHHHHHHHHh-cC
Confidence 333332222 3355667777778888888887 54
No 229
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.80 E-value=6.5e-17 Score=162.71 Aligned_cols=339 Identities=13% Similarity=0.025 Sum_probs=198.3
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCch
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (467)
+...||+..|.--..-|. -.|.|.+++.+.++... +.+ +. -..+....+++.|...... .+++.+ +++|+
T Consensus 39 G~~ylD~~~g~~~~~lGh--~~p~v~~ai~~q~~~~~-~~~-~~-~~~~~~~~la~~L~~~~~~---~~~v~f--~~sGs 108 (408)
T PRK04612 39 GREYLDLAAGIAVCGLGH--NDPDLVAALTEQAGKLW-HTS-NV-FYSAPPLKLAEELVTASRF---AEKVFL--CNSGT 108 (408)
T ss_pred CCEEEEcCccHhhccCCC--CCHHHHHHHHHHHHhcc-ccc-cc-cCCHHHHHHHHHHHhhCCC---CCEEEE--cCchH
Confidence 457899987753122232 36788888888775421 111 11 1122334455555432211 258888 99999
Q ss_pred hHHHHHHHHHHHhC--CC-----CEEEEcCCCCcchHHHH-hhCCCCeEE---eeeecC--CCCCCChhhHHHHHHcCCC
Q 012238 162 GSLRLAAALIERYF--PG-----AKVLISSPTWGNHKNIF-NDARVPWSE---YRYYDP--KTVGLDFEGMIADIKAAPG 228 (467)
Q Consensus 162 ~al~l~~~~l~~~~--~g-----d~Vlv~~P~y~~~~~~~-~~~G~~~~~---v~~~~~--~~~~~d~~~l~~~l~~~~~ 228 (467)
+|.+.+.++..... .| .+|+....+|.+..... ...|..... -+..+. .-...|++.+++.+. .
T Consensus 109 eA~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~---~ 185 (408)
T PRK04612 109 EANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDFNDVEALEAAMA---G 185 (408)
T ss_pred HHHHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCCCCHHHHHHhhC---C
Confidence 99999866654431 22 36899898887654322 222211100 011000 001137888888885 2
Q ss_pred CcEEEEeCCCCCCCCCCCC--HHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCc
Q 012238 229 GSFILLHGCAHNPTGIDPT--PEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL 306 (467)
Q Consensus 229 ~~~~i~i~~p~NPTG~~~~--~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~ 306 (467)
.....++..|.+++|.+++ .+.+++|.++|++||+++|+||+|.++...+ ..+.. ...+.+..+.+|||.+
T Consensus 186 ~~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G---~~~a~----~~~~~~pdi~t~~K~l 258 (408)
T PRK04612 186 GDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTG---TLFAH----WQEQVTPDIVTLAKAL 258 (408)
T ss_pred CCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCC---chhhh----hhcCCCCCEEEEcchh
Confidence 3455556678888887766 6789999999999999999999998876532 11111 1223456678999999
Q ss_pred ccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHH
Q 012238 307 GLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKN 386 (467)
Q Consensus 307 ~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~ 386 (467)
+ +|+|+||++ .++++++. +.......+.+.+.+.+.++...|+.- ++ ++..++.++
T Consensus 259 ~-~G~piga~~---~~~~~~~~------------~~~~~~~~t~~~~p~~~aaa~a~L~~~------~~--~~l~~~~~~ 314 (408)
T PRK04612 259 G-GGFPIGAML---AGPKVAET------------MQFGAHGTTFGGNPLAAAVARVALRKL------AS--PQIAANVAR 314 (408)
T ss_pred c-CCCceEEEE---ECHHHHhh------------hcCCCcCCCCCCCHHHHHHHHHHHHHH------Hh--ccHHHHHHH
Confidence 9 899999995 56666665 443333333446677777777666321 11 134455555
Q ss_pred HHHHHHHHhhhccCCCCC-cccccCCcceEEe--cC-CC--HHHHHHHHHcccEEEeCCC----eEEec-cCChhhHHHH
Q 012238 387 VRQKLFDSLSAKDKSGKD-WSFILRQIGMFSF--TG-LN--KAQSDNMTNKWHVYMTKDG----RISLA-GLSLAKCEYL 455 (467)
Q Consensus 387 ~r~~l~~~l~~~~g~~~~-~~~~~~~~g~f~~--~~-l~--~~~~~~ll~~~gI~v~~gg----Ris~~-~~~~~~i~~~ 455 (467)
+-+++.+.|+ ++....+ +..+...|.++-. .. .. ...+.+.+.++||++.+.| |+... .+++++++++
T Consensus 315 ~g~~l~~~l~-~l~~~~~~i~~vrg~Gl~~~i~~~~~~~~~a~~i~~~l~~~Gvlv~~~g~~~lRl~Ppl~it~eeid~~ 393 (408)
T PRK04612 315 QSAALRAGLE-ALNAEFGVFAQVRGRGLMLGAVLAPAHAGQAGAILDLAAEHGLLLLQAGPDVLRFVPALNLTDAELADG 393 (408)
T ss_pred HHHHHHHHHH-HHHhhCCCeeeeeccceEEEEEecCchhhHHHHHHHHHHHCCeEEeeCCCCEEEEcCCccCCHHHHHHH
Confidence 5556666555 4321000 1223444433311 11 11 2233334445799998765 56532 3488999999
Q ss_pred HHHHHHHHHh
Q 012238 456 ADAIIDSYHN 465 (467)
Q Consensus 456 ~~~l~~~l~~ 465 (467)
+++|.+++.+
T Consensus 394 l~~l~~~l~~ 403 (408)
T PRK04612 394 LARLRLALAD 403 (408)
T ss_pred HHHHHHHHHH
Confidence 9999999875
No 230
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.80 E-value=4.5e-17 Score=163.48 Aligned_cols=153 Identities=19% Similarity=0.174 Sum_probs=118.3
Q ss_pred cchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHH----HhhCCCCe
Q 012238 126 EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI----FNDARVPW 201 (467)
Q Consensus 126 ~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~----~~~~G~~~ 201 (467)
+-..+|.+.+|++.... ..+. +++|+.|+.++ +++.+.+||+|+++.++|...... +...|+++
T Consensus 61 Ptv~~lE~~la~leg~~--------~av~--~~SG~aAi~~a--l~all~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v 128 (432)
T PRK06702 61 PTLAAFEQKLAELEGGV--------GAVA--TASGQAAIMLA--VLNICSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDV 128 (432)
T ss_pred cHHHHHHHHHHHHhCCC--------cEEE--ECCHHHHHHHH--HHHhcCCCCEEEECCCchHHHHHHHHHHHHHCCCEE
Confidence 45788999999996443 4555 89999999998 556688999999999999865554 67889998
Q ss_pred EEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCC
Q 012238 202 SEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDN 281 (467)
Q Consensus 202 ~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~ 281 (467)
..++. .+|++.++++++ +++++|++.+|+||++.+.+ +++|+++|+++|+++|+|++|..-..-
T Consensus 129 ~~vd~------~~d~~~l~~~I~---~~Tk~I~~e~pgnP~~~v~D---i~~I~~iA~~~gi~livD~T~~tP~~~---- 192 (432)
T PRK06702 129 TFFNP------NLTADEIVALAN---DKTKLVYAESLGNPAMNVLN---FKEFSDAAKELEVPFIVDNTLATPYLC---- 192 (432)
T ss_pred EEECC------CCCHHHHHHhCC---cCCeEEEEEcCCCccccccC---HHHHHHHHHHcCCEEEEECCCCchhhC----
Confidence 88854 378999999998 67889999999999999988 557777799999999999997421100
Q ss_pred ChhHHHHHHhcCCeEEEEecCcc-----CcccCCCcc
Q 012238 282 DASSVRLFATRGMELLVAQSYSK-----NLGLYAERI 313 (467)
Q Consensus 282 ~~~~~~~~~~~~~~~i~~~S~SK-----~~~~~G~Ri 313 (467)
. + .+. .-.|++.|+|| ..+++|.++
T Consensus 193 ~--p----l~~-GADIvv~S~TKy~~Ghsd~l~G~v~ 222 (432)
T PRK06702 193 Q--A----FEH-GANIIVHSTTKYIDGHASSLGGIVI 222 (432)
T ss_pred C--h----hhc-CCCEEEEccccccCCCcceeceEEE
Confidence 0 1 111 23488999999 666666665
No 231
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.80 E-value=5.5e-17 Score=161.84 Aligned_cols=165 Identities=16% Similarity=0.159 Sum_probs=121.2
Q ss_pred cchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchH----HHHhhCCCCe
Q 012238 126 EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHK----NIFNDARVPW 201 (467)
Q Consensus 126 ~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~----~~~~~~G~~~ 201 (467)
+-...|+++++++.... ..+ + +++|+.|+.++ +..+.|||+|++++|.|+... ..++..|+++
T Consensus 50 p~~~~Le~~la~l~g~~-------~al-~--~~SG~~Al~~~---l~~l~pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~v 116 (380)
T PRK06176 50 PTRFALEELIADLEGGV-------KGF-A--FASGLAGIHAV---FSLFQSGDHVLLGDDVYGGTFRLFDKVLVKNGLSC 116 (380)
T ss_pred hhHHHHHHHHHHHhCCC-------CEE-E--ECCHHHHHHHH---HHHcCCCCEEEEcCCChhHHHHHHHHHHHhcCeEE
Confidence 34788999999995432 234 4 57778899865 456789999999999997543 3456678887
Q ss_pred EEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCC
Q 012238 202 SEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDN 281 (467)
Q Consensus 202 ~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~ 281 (467)
+.++. .|++.+++.++ +++++|++.+|+||||.+.+.+ +|+++|+++|+++|+|++|.......
T Consensus 117 ~~vd~-------~d~e~l~~ai~---~~t~lV~lesP~Nptg~~~di~---~I~~la~~~gi~vivD~t~a~~~~~~--- 180 (380)
T PRK06176 117 TIIDT-------SDLSQIKKAIK---PNTKALYLETPSNPLLKITDLA---QCASVAKDHGLLTIVDNTFATPYYQN--- 180 (380)
T ss_pred EEcCC-------CCHHHHHHhcC---cCceEEEEECCCCCCceecCHH---HHHHHHHHcCCEEEEECCccccccCC---
Confidence 77654 47899998886 5788999999999999988755 77777999999999999987644321
Q ss_pred ChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecCCHHHHhh
Q 012238 282 DASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAAR 328 (467)
Q Consensus 282 ~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~ 328 (467)
++ .. ...+++.|++|.++.+|-.+|.++ ++.++++.++
T Consensus 181 ---p~----~~-gaDivv~S~tK~l~g~~d~~gG~v-v~~~~~~~~~ 218 (380)
T PRK06176 181 ---PL----LL-GADIVVHSGTKYLGGHSDVVAGLV-TTNNEALAQE 218 (380)
T ss_pred ---cc----cc-CCCEEEecCceeccCCccceeeEE-EecHHHHHHH
Confidence 11 11 235889999999987775555543 2556666665
No 232
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.80 E-value=1.3e-16 Score=162.23 Aligned_cols=342 Identities=15% Similarity=0.102 Sum_probs=194.2
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCch
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (467)
+...||+..|.--..-|. -.|.|.+++.+.+..... +.......+.+..+|+.|....... -+++.+ +++|+
T Consensus 40 G~~ylD~~~g~~~~~lGh--~~p~v~~Ai~~ql~~~~~--~~~~~~~~~~~~~la~~L~~~~p~~--~~~v~f--~~sGs 111 (443)
T PRK08360 40 GNEYIDFLSDAAVQNVGH--NNPRVVKAIKEQTDKLIH--YTPIYGFPVEPLLLAEKLIEIAPGD--NPKVSF--GLSGS 111 (443)
T ss_pred CCEEEEccccHhhcccCC--CCHHHHHHHHHHHHhccC--ccccccCcHHHHHHHHHHHHhCCCC--CCEEEE--cCCHH
Confidence 457899988844222233 367888888887754221 1111111223334444443321110 247888 99999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchH-HHHhhCCC------------CeEEeeeecCCC--CC--------CChhh
Q 012238 162 GSLRLAAALIERYFPGAKVLISSPTWGNHK-NIFNDARV------------PWSEYRYYDPKT--VG--------LDFEG 218 (467)
Q Consensus 162 ~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~-~~~~~~G~------------~~~~v~~~~~~~--~~--------~d~~~ 218 (467)
+|.+.+.++........+|+...-+|.+.. ..+...|. .+..+|..+... +. .+++.
T Consensus 112 EAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (443)
T PRK08360 112 DANDGAIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVEY 191 (443)
T ss_pred HHHHHHHHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHHHH
Confidence 999998665544444457888887776543 22221221 123333311100 10 12345
Q ss_pred HHHHHHc--CCCCcEEEEeCCCCCCCCCCCC-HHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCe
Q 012238 219 MIADIKA--APGGSFILLHGCAHNPTGIDPT-PEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGME 295 (467)
Q Consensus 219 l~~~l~~--~~~~~~~i~i~~p~NPTG~~~~-~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~ 295 (467)
+++.++. .+++...+++...+||+|.+++ .+.+++|.++|++||+++|+||+|.++...+ ..+....+ ...++
T Consensus 192 ~~~~l~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~G---~~~a~~~~-~~~pD 267 (443)
T PRK08360 192 IKEKFEGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTG---KWFAIEHF-GVEPD 267 (443)
T ss_pred HHHHHHhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCc---cchhhhhc-CCCCC
Confidence 6666653 1356777777777799999887 5579999999999999999999999886532 11122111 22334
Q ss_pred EEEEecCccCcccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHH
Q 012238 296 LLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKA 375 (467)
Q Consensus 296 ~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~ 375 (467)
++ ++||.++ +|+|+||++ .++++++. +.......+.+.+.+.+.++...|+. +.+
T Consensus 268 ii---tlsK~l~-~G~pigav~---~~~~i~~~------------~~~~~~~~T~~~~p~~~aaa~a~l~~--l~~---- 322 (443)
T PRK08360 268 II---TLGKPLG-GGLPISATI---GRAEIMDS------------LPPLAHAFTLSGNPVASAAALAVIEE--IEE---- 322 (443)
T ss_pred EE---Eeccccc-CCceeEEEE---EcHHHHhh------------hcCCCCCCCCCcCHHHHHHHHHHHHH--HHH----
Confidence 43 6799999 999999995 67777776 44332223445566667777666542 111
Q ss_pred HHHHHHHHHHHHHHHHHHHhhh---ccCCCCCcccccCCcceEEe-c--CC-----C----HHHHHHHHHcccEEEeCC-
Q 012238 376 EMEMMAGRIKNVRQKLFDSLSA---KDKSGKDWSFILRQIGMFSF-T--GL-----N----KAQSDNMTNKWHVYMTKD- 439 (467)
Q Consensus 376 ~l~~~~~~~~~~r~~l~~~l~~---~~g~~~~~~~~~~~~g~f~~-~--~l-----~----~~~~~~ll~~~gI~v~~g- 439 (467)
+...++.+++-+++.+.|++ +.+. +..+...|-++-. + +- + ..+..++++ +||++.+.
T Consensus 323 --~~l~~~~~~~g~~l~~~L~~l~~~~~~---v~~vrg~Gl~~gie~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~~~~~~ 396 (443)
T PRK08360 323 --KNLLKRAEKLGNYTKKRLEEMKKKHEL---IGDVRGIGLMIGVDLVKDRETKERAYEEAAKVVWRAWE-LGLIVTFFS 396 (443)
T ss_pred --cCHHHHHHHHHHHHHHHHHHHHHhCCC---eeeeeccceEEEEEEecCCcccCccHHHHHHHHHHHHH-CCeEEeecC
Confidence 12233444444444444440 2222 1223334433311 1 10 1 123445554 69998764
Q ss_pred C---eEEec-cCChhhHHHHHHHHHHHHHhc
Q 012238 440 G---RISLA-GLSLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 440 g---Ris~~-~~~~~~i~~~~~~l~~~l~~~ 466 (467)
+ ||+.. .+++++++++++++.++++.+
T Consensus 397 ~~~lr~~P~l~~t~~~id~~~~~l~~~l~~~ 427 (443)
T PRK08360 397 GNVLRIQPPLTIEKEVLDEGLDILEEAIEDV 427 (443)
T ss_pred CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 3 77433 238899999999999998754
No 233
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.79 E-value=7.4e-17 Score=162.92 Aligned_cols=157 Identities=15% Similarity=0.089 Sum_probs=118.6
Q ss_pred CcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHh----hCCCC
Q 012238 125 IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN----DARVP 200 (467)
Q Consensus 125 ~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~----~~G~~ 200 (467)
.....+|++.+|++... +..++ +++|++|+.++ +...+.+||+|+++.|.|......+. ..|++
T Consensus 57 ~pt~~~Le~~lA~l~g~--------~~~l~--~ssG~~Ai~~a--l~al~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~ 124 (425)
T PRK06084 57 NPTNDVLEQRVAALEGG--------VGALA--VASGMAAITYA--IQTIAEAGDNIVSVAKLYGGTYNLLAHTLPRIGIE 124 (425)
T ss_pred CchHHHHHHHHHHHhCC--------CceeE--ehhHHHHHHHH--HHHHhCCCCEEEEeCCCcchHHHHHHHhcccceeE
Confidence 44567899999999543 23445 68999999998 45567899999999999985544443 24555
Q ss_pred eEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCC
Q 012238 201 WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLD 280 (467)
Q Consensus 201 ~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~ 280 (467)
+..++. .|++.+++.++ +++++|++++|+||||.+++. ++|+++|+++|+++|+|++|......
T Consensus 125 v~~~d~-------~d~e~le~ai~---~~tklV~lesp~NPtG~v~dl---~~I~~la~~~~i~vVvD~a~a~~~~~--- 188 (425)
T PRK06084 125 TRFAAH-------DDIAALEALID---ERTKAVFCESIGNPAGNIIDI---QALADAAHRHGVPLIVDNTVATPVLC--- 188 (425)
T ss_pred EEEECC-------CCHHHHHHHhc---cCCcEEEEeCCCCCCCeecCH---HHHHHHHHHcCCEEEEECCCcccccC---
Confidence 544432 48999999987 467888999999999999985 57777799999999999998643221
Q ss_pred CChhHHHHHHhcCCeEEEEecCccCcccCCCccceEE
Q 012238 281 NDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMN 317 (467)
Q Consensus 281 ~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~ 317 (467)
. ++ .. .-.+++.|++|.++.+|.++|.++
T Consensus 189 -~--p~----~~-gaDivv~S~tK~l~G~g~~~gG~v 217 (425)
T PRK06084 189 -R--PF----EH-GADIVVHSLTKYIGGHGTSIGGIV 217 (425)
T ss_pred -C--hh----hc-CCCEEEECchhcccccccceeEEE
Confidence 1 11 11 235889999999999999999986
No 234
>PRK05968 hypothetical protein; Provisional
Probab=99.79 E-value=4.8e-17 Score=163.02 Aligned_cols=211 Identities=17% Similarity=0.166 Sum_probs=142.6
Q ss_pred cchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcc----hHHHHhhCCCCe
Q 012238 126 EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGN----HKNIFNDARVPW 201 (467)
Q Consensus 126 ~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~----~~~~~~~~G~~~ 201 (467)
.-..+|++++|++.+.. ..++ +.+|+.|+.++ +...+.|||+|+++.+.|.. +...++..|+++
T Consensus 63 p~~~~le~~lA~l~g~~--------~av~--~~sG~~Ai~~a--l~al~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v 130 (389)
T PRK05968 63 PTVRAFEEMLAKLEGAE--------DARG--FASGMAAISST--VLSFVEPGDRIVAVRHVYPDAFRLFETILKRMGVEV 130 (389)
T ss_pred hhHHHHHHHHHHHhCCC--------cEEE--ECCHHHHHHHH--HHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCceE
Confidence 34789999999996543 2334 57778899887 45567899999999999975 335667789998
Q ss_pred EEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCC
Q 012238 202 SEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDN 281 (467)
Q Consensus 202 ~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~ 281 (467)
+.++. .|++.+++.+. +++++++++ |||..++..++++|+++|+++|+++|+|++|....+..
T Consensus 131 ~~vd~-------~d~~~l~~~i~----~tklV~ie~---pt~~~~~~~dl~~i~~la~~~gi~vivD~a~a~~~~~~--- 193 (389)
T PRK05968 131 DYVDG-------RDEEAVAKALP----GAKLLYLES---PTSWVFELQDVAALAALAKRHGVVTMIDNSWASPVFQR--- 193 (389)
T ss_pred EEeCC-------CCHHHHHHhcc----cCCEEEEEC---CCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcchhccC---
Confidence 88764 37888888773 456777764 55556667889999999999999999999987654321
Q ss_pred ChhHHHHHHhcCCeEEEEecCccCcccCC-CccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccC-ccCCCchHHHHH
Q 012238 282 DASSVRLFATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARP-MYSNPPVHGARI 359 (467)
Q Consensus 282 ~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~ 359 (467)
++ ..+ ..+++.|+||.++.+| .+.|+++ .+++++++ ++..... .....+.+.+.+
T Consensus 194 ---p~----~~g-~Divv~S~tK~l~g~~~~~gG~i~---~~~~~~~~------------l~~~~~~~~g~~~~~~~A~~ 250 (389)
T PRK05968 194 ---PI----TLG-VDLVIHSASKYLGGHSDTVAGVVA---GSKEHIAR------------INAEAYPYLGAKLSPFEAWL 250 (389)
T ss_pred ---ch----hcC-CcEEEeeccccccCCCCeEEEEEE---ECHHHHHH------------HHHHHHHhCCCCCChHHHHH
Confidence 11 112 2478889999998766 4678774 77777776 3322211 123344455444
Q ss_pred HHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 012238 360 VANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD 399 (467)
Q Consensus 360 ~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~ 399 (467)
+...|+. +..+.++..++...+.+.|+ ..
T Consensus 251 ~l~~L~t----------l~~r~~~~~~~a~~la~~L~-~~ 279 (389)
T PRK05968 251 LLRGLRT----------LPLRMKAHEASALEIARRLK-AH 279 (389)
T ss_pred HHcccCc----------HHHHHHHHHHHHHHHHHHHH-hC
Confidence 4444432 33444455555667777777 54
No 235
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.79 E-value=1.1e-16 Score=159.33 Aligned_cols=162 Identities=14% Similarity=0.047 Sum_probs=120.7
Q ss_pred hHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHH----HhhCCCCeEE
Q 012238 128 LAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI----FNDARVPWSE 203 (467)
Q Consensus 128 ~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~----~~~~G~~~~~ 203 (467)
...|++.+|++... +++++ ++||++|+.++ +...+.+||+|++++|.|...... ++..|+++..
T Consensus 52 ~~~lE~~lA~l~g~--------~~~~~--~~sG~~Ai~~a--l~all~~GD~Vl~~~~~y~~t~~~~~~~~~~~gi~v~~ 119 (377)
T TIGR01324 52 HFALQDAMCELEGG--------AGCYL--YPSGLAAVTNS--ILAFVKAGDHVLMVDSAYEPTRYFCDIVLKRMGVDITY 119 (377)
T ss_pred HHHHHHHHHHHhCC--------CcEEE--ECcHHHHHHHH--HHHhcCCCCEEEEcCCCcHHHHHHHHHHHHhcCcEEEE
Confidence 46899999999543 36777 89999999998 556678999999999999876543 3567877766
Q ss_pred eeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCCh
Q 012238 204 YRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDA 283 (467)
Q Consensus 204 v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~ 283 (467)
++.. +.+.+++.++ ++++++++++|+||||.. .++++|+++|+++|+++|+|++|..-....
T Consensus 120 ~d~~-------~~e~l~~~i~---~~tklV~lesp~Np~g~~---~dl~~I~~la~~~g~~livD~t~a~g~~~~----- 181 (377)
T TIGR01324 120 YDPL-------IGEDIATLIQ---PNTKVLFLEAPSSITFEI---QDIPAIAKAARNPGIVIMIDNTWAAGLLFK----- 181 (377)
T ss_pred ECCC-------CHHHHHHhcC---CCceEEEEECCCCCCCcH---HHHHHHHHHHHHcCCEEEEECCCccccccC-----
Confidence 6431 2267877776 678999999999999874 567788999999999999999986433211
Q ss_pred hHHHHHHhcCCeEEEEecCccCcccC-CCccceEEEecCCHHHHhh
Q 012238 284 SSVRLFATRGMELLVAQSYSKNLGLY-AERIGAMNVVCSSSDLAAR 328 (467)
Q Consensus 284 ~~~~~~~~~~~~~i~~~S~SK~~~~~-G~RiG~~~~v~~~~~~~~~ 328 (467)
+. +. .-.++++|++|.++-+ +...|+++ .+++..+.
T Consensus 182 -pl----~~-gaDivv~S~tK~l~G~~d~~gG~v~---~~~~~~~~ 218 (377)
T TIGR01324 182 -PL----EH-GVDISIQAGTKYLVGHSDIMIGTVV---ANARTWDQ 218 (377)
T ss_pred -cc----cc-CceEEEecCceeccCCCCceEEEEE---eCHHHHHH
Confidence 11 11 2358899999999744 35667664 66666665
No 236
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.79 E-value=7.1e-18 Score=163.05 Aligned_cols=172 Identities=16% Similarity=0.026 Sum_probs=129.5
Q ss_pred CCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCe
Q 012238 122 YLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPW 201 (467)
Q Consensus 122 Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~ 201 (467)
+.|..-+.++++.+|++++. .+-+++ ++|+++++..+ +...+.|||+|+++.|+|..+...+...|+++
T Consensus 55 ~~~~g~i~~~~~~~A~~~ga-------~~~~~~--~~Gst~a~~~~--l~al~~~gd~Vlv~~~~h~s~~~~~~~~g~~~ 123 (294)
T cd00615 55 LDPTGPIKEAQELAARAFGA-------KHTFFL--VNGTSSSNKAV--ILAVCGPGDKILIDRNCHKSVINGLVLSGAVP 123 (294)
T ss_pred CCCChHHHHHHHHHHHHhCC-------CCEEEE--cCcHHHHHHHH--HHHcCCCCCEEEEeCCchHHHHHHHHHCCCEE
Confidence 33555688999999999643 234445 79999999887 55567899999999999999988999999999
Q ss_pred EEeeeecCCC----CCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCC-CCC
Q 012238 202 SEYRYYDPKT----VGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQG-FAS 276 (467)
Q Consensus 202 ~~v~~~~~~~----~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~-~~~ 276 (467)
++++...+.+ +.+|++.+++.+++. ++++++++++| ||||.+++. ++|+++|+++|+++|+||+|.. +.+
T Consensus 124 ~~v~~~~~~~~~~~~~i~~~~l~~~l~~~-~~~k~v~l~~p-~~~G~~~dl---~~I~~~~~~~g~~livDeA~~~~~~~ 198 (294)
T cd00615 124 VYLKPERNPYYGIAGGIPPETFKKALIEH-PDAKAAVITNP-TYYGICYNL---RKIVEEAHHRGLPVLVDEAHGAHFRF 198 (294)
T ss_pred EEecCccCcccCcCCCCCHHHHHHHHHhC-CCceEEEEECC-CCCCEecCH---HHHHHHHHhcCCeEEEECcchhhhcc
Confidence 9987643322 378999999999753 35678888888 799999875 5788889999999999999864 333
Q ss_pred CCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEE
Q 012238 277 GSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMN 317 (467)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~ 317 (467)
.+ ..+.. ......++++.|++|++ +|++.|+++
T Consensus 199 ~~-~~~~~-----~~~~~~div~~S~hK~l--~g~~~~~~l 231 (294)
T cd00615 199 HP-ILPSS-----AAMAGADIVVQSTHKTL--PALTQGSMI 231 (294)
T ss_pred Cc-ccCcc-----hhhcCCcEEEEchhccc--chHhHHHHH
Confidence 21 01110 11234679999999985 788887764
No 237
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.78 E-value=1.1e-16 Score=160.50 Aligned_cols=228 Identities=14% Similarity=0.047 Sum_probs=156.6
Q ss_pred hHHHHHHHHHHHhCCCCcccccCceeeeecCCchh-HHHHHHHHHHHhC----CCCEEEEcCCCCcchHHHHhhCCCCeE
Q 012238 128 LAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG-SLRLAAALIERYF----PGAKVLISSPTWGNHKNIFNDARVPWS 202 (467)
Q Consensus 128 ~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~-al~l~~~~l~~~~----~gd~Vlv~~P~y~~~~~~~~~~G~~~~ 202 (467)
..+|.+.+++++..+. .+..++ ++|+|+ ++.++ + ..+. +||.|+++.-+|......+...|++++
T Consensus 107 ~~~~e~~~~~~~G~~~-----~~~a~~--v~~~Tg~al~la--L-~alr~~~~~gd~VI~p~~th~S~~kAi~~~G~~pv 176 (444)
T TIGR03531 107 TNKLVKDFLKLLGLRS-----IKSAFV--VPLATGMSLSLC--L-SALRHKRPKAKYVIWPRIDQKSCIKAISTAGFEPR 176 (444)
T ss_pred HHHHHHHHHHHcCCCC-----CCEEEE--ECCHHHHHHHHH--H-HHcCCcCCCCCEEEEECcChHHHHHHHHHcCCeEE
Confidence 3455556666643220 134666 789995 66665 2 2333 589999999999999999999999999
Q ss_pred Eeee-ecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCC
Q 012238 203 EYRY-YDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDN 281 (467)
Q Consensus 203 ~v~~-~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~ 281 (467)
.++. .+++++.+|++.+++++++...++.++++++|+ ||.....+++++|+++|++||+++|+|++|.....
T Consensus 177 ~Vd~~~d~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~--t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~----- 249 (444)
T TIGR03531 177 VIETVLDGDELTTDVEDIERAIEEIGPDNILCVLSTTS--CFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSN----- 249 (444)
T ss_pred EeeeeecCcCCCcCHHHHHHHHHhccCCCEEEEEEcCC--cCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcCh-----
Confidence 9996 346689999999999998533356777776665 66666788899999999999999999999875321
Q ss_pred ChhHHHHHH----hcCCeEEEEecCccCcccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHH
Q 012238 282 DASSVRLFA----TRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGA 357 (467)
Q Consensus 282 ~~~~~~~~~----~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 357 (467)
....+. ..+.-.+++.|++|.+.+||+ |++++ +.++++++. +...... ...+...+
T Consensus 250 ---~~~~~~~~g~~~Grad~vv~s~hK~l~~pg~--Gg~I~-~~d~el~~~------------i~~~y~g--~~~~s~~~ 309 (444)
T TIGR03531 250 ---KYMELINKAIKVGRVDAVVSSTDKNFMVPVG--GAIIY-SFDENFIQE------------ISKSYPG--RASASPSL 309 (444)
T ss_pred ---hhhhhhhccccccCCCeEEEeCccCCCCCCC--EEEEE-ECCHHHHHH------------HHHhccC--CCCChHHH
Confidence 111111 111225678899999999887 77652 467887776 4433222 12333456
Q ss_pred HHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 012238 358 RIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD 399 (467)
Q Consensus 358 ~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~ 399 (467)
.++..++..+ .+.++++.+++.++++++.+.|. ++
T Consensus 310 ~~~~~ll~~G------~~g~~~li~~~~~~a~~l~~~L~-~l 344 (444)
T TIGR03531 310 DVLITLLSLG------SKGYLELLKERKEMYKYLKELLQ-KL 344 (444)
T ss_pred HHHHHHHHhC------HHHHHHHHHHHHHHHHHHHHHHH-HH
Confidence 6666555433 34466777778888888888877 54
No 238
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.77 E-value=7.2e-16 Score=156.00 Aligned_cols=340 Identities=11% Similarity=0.064 Sum_probs=191.9
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCC--CcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCC
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGEN--KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 159 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~--~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g 159 (467)
+...||+..|..-..-|. -.|.|.+++.+.++.... ..+.+.....++-+.+++..... ..+++++ +++
T Consensus 39 G~~ylD~~~g~~~~~lGh--~~p~v~~ai~~ql~~l~~~~~~~~~~~~~~~la~~l~~~~p~~-----~~~~v~f--~~S 109 (425)
T PRK07495 39 GRRYIDFAAGIAVVNTGH--RHPRVIAAVKAQLDRFTHTCHQVVPYENYVRLAERLNALVPGD-----FAKKTIF--VTT 109 (425)
T ss_pred CCEEEEccccHHhhccCC--CCHHHHHHHHHHHhhccCcccCccCCHHHHHHHHHHHHhCCCC-----CCCEEEE--CCc
Confidence 457899987753222233 367788888887754211 11223333334444444442111 0257888 999
Q ss_pred chhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhh-CCC-------------CeEEeeeecCCCCCCC----hhhHHH
Q 012238 160 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFND-ARV-------------PWSEYRYYDPKTVGLD----FEGMIA 221 (467)
Q Consensus 160 gt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~-~G~-------------~~~~v~~~~~~~~~~d----~~~l~~ 221 (467)
|++|.+.+.++........+|+...-+|.+....... .|. .+..+|..+. ..+.+ ++.+++
T Consensus 110 GseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~l~~ 188 (425)
T PRK07495 110 GAEAVENAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVE-LHGVSVEQSLAALDK 188 (425)
T ss_pred hHHHHHHHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCcc-cccccHHHHHHHHHH
Confidence 9999999866544443445888888888765322111 110 1233333211 11222 344566
Q ss_pred HHHc--CCCCcE-EEEeCCCCCCCC-CCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEE
Q 012238 222 DIKA--APGGSF-ILLHGCAHNPTG-IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELL 297 (467)
Q Consensus 222 ~l~~--~~~~~~-~i~i~~p~NPTG-~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i 297 (467)
.++. .+.+.. +++-+..+| +| ..++.+.+++|.++|++||+++|+||+|.+|...+ ..+.. +..+.+.
T Consensus 189 ~~~~~~~~~~iaavi~EPv~g~-~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G---~~~a~----~~~gv~p 260 (425)
T PRK07495 189 LFKADVDPQRVAAIIIEPVQGE-GGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTG---KLFAM----EHHEVAA 260 (425)
T ss_pred HHHhccCCCceEEEEECCccCC-CCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCcCC---Cceee----cccCCCC
Confidence 6642 123334 444444555 78 45799999999999999999999999998875432 11111 1112233
Q ss_pred EEecCccCcccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHH
Q 012238 298 VAQSYSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEM 377 (467)
Q Consensus 298 ~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l 377 (467)
-+.+|||.++ .|+++||++ .++++++. +.......+.+.+.+++.++...|+- +.+
T Consensus 261 Di~tlsK~l~-~G~pigav~---~~~~i~~~------------~~~~~~~~T~~~~pl~~aaa~a~l~~--l~~------ 316 (425)
T PRK07495 261 DLTTMAKGLA-GGFPLAAVT---GRAEIMDA------------PGPGGLGGTYGGNPLGIAAAHAVLDV--IEE------ 316 (425)
T ss_pred CEEeehhhhc-CCccceEEE---EcHHHHhc------------cCCCCcCCCCCCCHHHHHHHHHHHHH--HHh------
Confidence 4688899999 899999995 77777776 43322233445666666655554421 100
Q ss_pred HHHHHHHHHHHHHHHHHhhhccC--CCCCcccccCCcceEEecCCC--------H----HHHHHHHHcccEEEeCC---C
Q 012238 378 EMMAGRIKNVRQKLFDSLSAKDK--SGKDWSFILRQIGMFSFTGLN--------K----AQSDNMTNKWHVYMTKD---G 440 (467)
Q Consensus 378 ~~~~~~~~~~r~~l~~~l~~~~g--~~~~~~~~~~~~g~f~~~~l~--------~----~~~~~ll~~~gI~v~~g---g 440 (467)
....++.+++.+++.+.|+ ++- .|. +..+... |+++|+.+. . .+.+.++ ++|+++.+. |
T Consensus 317 ~~l~~~~~~~g~~l~~~L~-~l~~~~~~-i~~vrG~-Gl~~~iel~~~~~~~~~~~~~~~~~~~~~-~~Gvl~~~~g~~~ 392 (425)
T PRK07495 317 EDLCERANQLGNRLKQRLA-SLRETVPE-IADIRGP-GFMNAVEFNDADSGLPSAEFANRVRLKAL-EKGLILLTCGVHG 392 (425)
T ss_pred chHHHHHHHHHHHHHHHHH-HHHhhCCC-eeeeecC-ceEEEEEEecCCCCCccHHHHHHHHHHHH-HCCeEEeecCCCC
Confidence 0222333333444444443 220 111 1112222 777776441 1 1233444 469998664 2
Q ss_pred ---eEEec-cCChhhHHHHHHHHHHHHHhcC
Q 012238 441 ---RISLA-GLSLAKCEYLADAIIDSYHNVS 467 (467)
Q Consensus 441 ---Ris~~-~~~~~~i~~~~~~l~~~l~~~~ 467 (467)
||.-. .++++++++++++|.+++++++
T Consensus 393 ~~~r~~Ppl~it~~~id~~~~~l~~~l~~~~ 423 (425)
T PRK07495 393 NVIRFLAPITIQDDVFAEALDILEASILEAS 423 (425)
T ss_pred CEEEEeCCCccCHHHHHHHHHHHHHHHHHHh
Confidence 66533 3488999999999999998764
No 239
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.76 E-value=4.6e-16 Score=154.60 Aligned_cols=206 Identities=11% Similarity=0.036 Sum_probs=138.3
Q ss_pred HHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHH----HHhhCCCCeEEee
Q 012238 130 AFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKN----IFNDARVPWSEYR 205 (467)
Q Consensus 130 ~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~----~~~~~G~~~~~v~ 205 (467)
.|++.++.+-.+ ++.+++ .+|++|+..+ ++..+.+||+|+++.|.|+++.. .++..|+++..++
T Consensus 68 ~Le~~la~le~~-------~~~v~~---sSG~aAi~~~--l~all~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~vd 135 (395)
T PRK05967 68 ALCKAIDALEGS-------AGTILV---PSGLAAVTVP--FLGFLSPGDHALIVDSVYYPTRHFCDTMLKRLGVEVEYYD 135 (395)
T ss_pred HHHHHHHHHhCC-------CCEEEE---CcHHHHHHHH--HHHhcCCCCEEEEccCCcHHHHHHHHHHHHhcCeEEEEeC
Confidence 566667665322 344544 6689999988 56678899999999999998765 4577898888875
Q ss_pred eecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhH
Q 012238 206 YYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASS 285 (467)
Q Consensus 206 ~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~ 285 (467)
.. +.+.++++++ +++++|++++|+||++. ..++++|+++|+++|+++|+|++|....+-. +
T Consensus 136 ~~-------~~e~l~~al~---~~TklV~lesPsNP~l~---v~dl~~I~~la~~~g~~vvVD~t~a~p~~~~------p 196 (395)
T PRK05967 136 PE-------IGAGIAKLMR---PNTKVVHTEAPGSNTFE---MQDIPAIAEAAHRHGAIVMMDNTWATPLYFR------P 196 (395)
T ss_pred CC-------CHHHHHHhcC---cCceEEEEECCCCCCCc---HHHHHHHHHHHHHhCCEEEEECCccCceecC------h
Confidence 41 3477888887 57899999999999764 6778899999999999999999987543221 1
Q ss_pred HHHHHhcCCeEEEEecCccCcccC-CCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHh
Q 012238 286 VRLFATRGMELLVAQSYSKNLGLY-AERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVV 364 (467)
Q Consensus 286 ~~~~~~~~~~~i~~~S~SK~~~~~-G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L 364 (467)
+ +. .-.+++.|.+|.++-. +...|++ +.+++..++ +...........++.....+..-|
T Consensus 197 l----~~-GaDivv~S~tKy~~Gh~d~~~G~v---~~~~~~~~~------------l~~~~~~~G~~~~p~da~l~~rgl 256 (395)
T PRK05967 197 L----DF-GVDISIHAATKYPSGHSDILLGTV---SANEKCWPQ------------LLEAHGTLGLCAGPDDTYQILRGL 256 (395)
T ss_pred h----Hc-CCCEEEEecccccCCCCCeeEEEE---EcCHHHHHH------------HHHHHHHcCCCCCHHHHHHHHcCc
Confidence 1 22 2348899999987533 3445655 356665555 332222233345555444333222
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 012238 365 GNPALFDEWKAEMEMMAGRIKNVRQKLFDSLS 396 (467)
Q Consensus 365 ~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~ 396 (467)
. .+..+.++..++...+.+.|+
T Consensus 257 ~----------Tl~lR~~~~~~na~~lA~~L~ 278 (395)
T PRK05967 257 R----------TMGIRLEHHRKSALEIARWLE 278 (395)
T ss_pred c----------cHHHHHHHHHHHHHHHHHHHH
Confidence 2 244455555666666777776
No 240
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.76 E-value=4.2e-16 Score=157.75 Aligned_cols=335 Identities=14% Similarity=0.058 Sum_probs=188.8
Q ss_pred CCcEEecCcccCCCCCCCCchHHHHHHHHHHHhc---CCCCc-CC---CCcchHHHHHHHHHHHhCCCCcccccCceeee
Q 012238 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER---GENKE-YL---PIEGLAAFNKVTAELLFGADNSVLKEQRVATV 155 (467)
Q Consensus 83 ~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~---~~~~~-Y~---~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~ 155 (467)
++++.|..+.. + |. ++.+.+++.+.+.. +.... |. ......+.++.+ ++++. ++++|++
T Consensus 26 ~~~iyld~~a~----g-~~-p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~g~------~~~~v~~- 91 (406)
T TIGR01814 26 NAVIYLDGNSL----G-LM-PKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESLLKL-RLVGA------KEDEVVV- 91 (406)
T ss_pred CCcEEecCCCc----C-cC-cHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhhccc-cccCC------CCCcEEE-
Confidence 35677775543 3 33 78888888766532 11011 11 111122222233 34332 3789999
Q ss_pred ecCCchhHHHHHHHHHHHhCCC---CEEEEcCCCCcch----HHHHhhCCCCe----EEeeeecCCCCCCChhhHHHHHH
Q 012238 156 QGLSGTGSLRLAAALIERYFPG---AKVLISSPTWGNH----KNIFNDARVPW----SEYRYYDPKTVGLDFEGMIADIK 224 (467)
Q Consensus 156 ~t~ggt~al~l~~~~l~~~~~g---d~Vlv~~P~y~~~----~~~~~~~G~~~----~~v~~~~~~~~~~d~~~l~~~l~ 224 (467)
|.|+|+++++++ ...+.+| +.|++....|+.. ...++..|+++ +.++. +.++.+|++.+++.++
T Consensus 92 -~~~~t~~l~~~~--~~~~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~--~~~g~~~~~~l~~~~~ 166 (406)
T TIGR01814 92 -MNTLTINLHLLL--ASFYKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEP--REEETLRLEDILDTIE 166 (406)
T ss_pred -eCCchHHHHHHH--HHhcCCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEecc--CCCCccCHHHHHHHHH
Confidence 999999999972 3334454 3688888889763 22446678887 34444 3346689999999886
Q ss_pred cCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCcc
Q 012238 225 AAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSK 304 (467)
Q Consensus 225 ~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK 304 (467)
...++++++++++++|.||..++.+ +|+++|+++|+++++|++ +.+.....+. ....-.+++.|..|
T Consensus 167 ~~~~~t~lv~~~~v~~~tG~~~~~~---~i~~~~~~~g~~~~vD~a-q~~G~~~id~---------~~~gvD~~~~s~hK 233 (406)
T TIGR01814 167 KNGDDIAVILLSGVQYYTGQLFDMA---AITRAAHAKGALVGFDLA-HAVGNVPLDL---------HDWGVDFACWCTYK 233 (406)
T ss_pred hcCCCeEEEEEeccccccceecCHH---HHHHHHHHcCCEEEEEcc-cccCCccccc---------ccCCCCEEEEcCcc
Confidence 5446789999999999999999855 667779999999999999 5444322211 11133577899999
Q ss_pred Cc-ccCCCccceEEEecCCHHHHhhhhhhhHHHHHHH-----H------Hhh-ccCccCCCchHHHHHHHHHhCChhhHH
Q 012238 305 NL-GLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQ-----L------KRL-ARPMYSNPPVHGARIVANVVGNPALFD 371 (467)
Q Consensus 305 ~~-~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~-----l------~~~-~~~~~~~~~~~~~~~~~~~L~~~~~~~ 371 (467)
.+ |.|| .| ++ ...+...+. .+........ . ... .+.....++..+..++..+|+. ..
T Consensus 234 ~l~g~pG--~~-l~--v~~~~~~~~--~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~---~~ 303 (406)
T TIGR01814 234 YLNAGPG--AG-AF--VHEKHAHTE--RPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDI---FD 303 (406)
T ss_pred ccCCCCC--eE-EE--Eehhhhhhc--CCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHH---HH
Confidence 76 4455 33 32 122221111 0000000000 0 000 0000112333333333333321 10
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcc-C-CCCCcccccC-----CcceEEe-cCCCHHHHHHHHHcccEEEeCC--C-
Q 012238 372 EWKAEMEMMAGRIKNVRQKLFDSLSAKD-K-SGKDWSFILR-----QIGMFSF-TGLNKAQSDNMTNKWHVYMTKD--G- 440 (467)
Q Consensus 372 ~~~~~l~~~~~~~~~~r~~l~~~l~~~~-g-~~~~~~~~~~-----~~g~f~~-~~l~~~~~~~ll~~~gI~v~~g--g- 440 (467)
+..+++.+++.+...+++.+.|+ +. + .+ ++++..+ .+++..+ ...+.+.+.+.|.++||.+... +
T Consensus 304 --~~g~~~i~~~~~~l~~~l~~~l~-~~~~~~~-~~~i~~~~~~~~r~~~v~~~~~~~~~~~~~~L~~~gi~v~~~~~~~ 379 (406)
T TIGR01814 304 --QAGMEALRKKSLLLTDYLEELIK-ARCGGPP-VLTIITPRDHAQRGCQLSLTHPVPGKAVFQALIKRGVIGDKREPSV 379 (406)
T ss_pred --hcCHHHHHHHHHHHHHHHHHHHH-hhcCCCC-ceEEeCCCChhhcCCeEEEEecCCHHHHHHHHHHCCEEEeccCCCe
Confidence 12256777888888888888887 53 2 11 1333332 1233322 2334444444445569988654 3
Q ss_pred -eEEec-cC-ChhhHHHHHHHHHHHH
Q 012238 441 -RISLA-GL-SLAKCEYLADAIIDSY 463 (467)
Q Consensus 441 -Ris~~-~~-~~~~i~~~~~~l~~~l 463 (467)
|||++ .. +++++++++++|++++
T Consensus 380 iRiS~~~~~nt~~did~l~~~l~~~~ 405 (406)
T TIGR01814 380 IRVAPVPLYNTFVDVYDAVNVLEEIL 405 (406)
T ss_pred EEEechhccCCHHHHHHHHHHHHHHh
Confidence 99983 33 7799999999998875
No 241
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.76 E-value=2.9e-15 Score=146.95 Aligned_cols=321 Identities=15% Similarity=0.128 Sum_probs=209.2
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhc------CCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeee
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER------GENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATV 155 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~------~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~ 155 (467)
+.+++||+..+|.- ... .|.++++..+.+.. +...-++...-..+|.+.+|+|+.. +.-+++
T Consensus 38 ~~~~~nf~SNdYLG---La~-~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~g~-------e~al~f- 105 (388)
T COG0156 38 GRKVLNFCSNDYLG---LAS-HPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFLGA-------EAALLF- 105 (388)
T ss_pred CceeEeeeccCccc---ccC-CHHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHhCC-------CcEEEE-
Confidence 45799999988853 333 45566666666533 1112233445578899999999643 334444
Q ss_pred ecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCC-C--CcEE
Q 012238 156 QGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP-G--GSFI 232 (467)
Q Consensus 156 ~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~-~--~~~~ 232 (467)
.+|=.|...+ +-..+.++|.|+.-.-.+....+-++..+++++.+.- .|++.|++.+++.. . +.++
T Consensus 106 --~SGy~AN~~~--i~~l~~~~dli~~D~lnHASiidG~rls~a~~~~f~H-------nD~~~Le~~l~~~~~~~~~~~~ 174 (388)
T COG0156 106 --SSGFVANLGL--LSALLKKGDLIFSDELNHASIIDGIRLSRAEVRRFKH-------NDLDHLEALLEEARENGARRKL 174 (388)
T ss_pred --cccchhHHHH--HHHhcCCCcEEEEechhhhhHHHHHHhCCCcEEEecC-------CCHHHHHHHHHhhhccCCCceE
Confidence 4444444443 3444668898888888888888888999999988865 68899999997631 1 3567
Q ss_pred EEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHH-HH-HhcCCeEEEEecCccCcccCC
Q 012238 233 LLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVR-LF-ATRGMELLVAQSYSKNLGLYA 310 (467)
Q Consensus 233 i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~-~~-~~~~~~~i~~~S~SK~~~~~G 310 (467)
|+....-.-.|.+.+. .+|++++++|+.++++||+|.--.+|. ....+. .+ ....+..|+++||||.||..|
T Consensus 175 IvtegVfSMdGdiApL---~~l~~L~~ky~a~L~VDEAHa~Gv~G~---~GrG~~e~~g~~~~~vdi~~gTlsKAlGs~G 248 (388)
T COG0156 175 IVTEGVFSMDGDIAPL---PELVELAEKYGALLYVDEAHAVGVLGP---NGRGLAEHFGLEPEEVDIIVGTLGKALGSSG 248 (388)
T ss_pred EEEeccccCCCCcCCH---HHHHHHHHHhCcEEEEEccccccccCC---CCccHHHHhCCCCccceEEEEEchhhhcccC
Confidence 7767766677876665 577777999999999999988666663 111221 22 122445899999999999777
Q ss_pred CccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCc-cC-CCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHH
Q 012238 311 ERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPM-YS-NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVR 388 (467)
Q Consensus 311 ~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~-~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r 388 (467)
||+ +++..+++. +....++. ++ +.|+....++..+++. .+...+.+++++++.
T Consensus 249 ---g~v---~g~~~~~d~------------L~~~ar~~ifStalpP~~aaa~~~al~~-------l~~~~~~r~~L~~~~ 303 (388)
T COG0156 249 ---GYI---AGSAALIDY------------LRNRARPFIFSTALPPAVAAAALAALRI-------LEEGPERRERLQELA 303 (388)
T ss_pred ---cee---eCcHHHHHH------------HHHhCCceeccCCCCHHHHHHHHHHHHH-------HHhCHHHHHHHHHHH
Confidence 887 599998887 55443433 33 3333333333333321 122346777788888
Q ss_pred HHHHHHhhhccCCCCCcccccCCcceE-EecCC---CHHHHHHHHHcccEEEeCC-------C----eEEecc-CChhhH
Q 012238 389 QKLFDSLSAKDKSGKDWSFILRQIGMF-SFTGL---NKAQSDNMTNKWHVYMTKD-------G----RISLAG-LSLAKC 452 (467)
Q Consensus 389 ~~l~~~l~~~~g~~~~~~~~~~~~g~f-~~~~l---~~~~~~~ll~~~gI~v~~g-------g----Ris~~~-~~~~~i 452 (467)
..+...++ ..++ ...+...... +.++- ..+....++++ ||++.+- | ||+++. .++++|
T Consensus 304 ~~~~~~~~-~~~~----~~~~s~s~I~pv~~gd~~~a~~~s~~l~~~-Gi~v~~i~~PTVp~gtarlRi~lta~ht~~~I 377 (388)
T COG0156 304 AFFRSLLK-ALGL----VLLPSESPIIPVILGDEERALEASRALLEE-GIYVSAIRPPTVPKGTARLRITLTAAHTEEDI 377 (388)
T ss_pred HHHHHHHH-hcCC----ccCCCCCCeeeeEeCCHHHHHHHHHHHHHC-CeeEeeecCCCCCCCcceEEEEecCCCCHHHH
Confidence 88886666 6663 3333333322 33343 23446677776 9998664 3 888753 488999
Q ss_pred HHHHHHHHHH
Q 012238 453 EYLADAIIDS 462 (467)
Q Consensus 453 ~~~~~~l~~~ 462 (467)
+++++++.++
T Consensus 378 ~~l~~~l~~~ 387 (388)
T COG0156 378 DRLAEALSEV 387 (388)
T ss_pred HHHHHHHHhh
Confidence 9999998765
No 242
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.75 E-value=1.5e-15 Score=150.83 Aligned_cols=182 Identities=24% Similarity=0.127 Sum_probs=128.6
Q ss_pred HHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHH-hCCCCEEEEcCCCC
Q 012238 109 AENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER-YFPGAKVLISSPTW 187 (467)
Q Consensus 109 a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~-~~~gd~Vlv~~P~y 187 (467)
++.+.+..+. |.......++++.+++++.. +++++ +.+|++++.++ +... +.+||+|+++.++|
T Consensus 4 ~~~~~~~~~~---~~~~~~~~~~~~~la~~~~~--------~~~~~--~~sgt~al~~~--l~~l~~~~gd~vl~~~~~~ 68 (352)
T cd00616 4 AVEEVLDSGW---LTLGPKVREFEKAFAEYLGV--------KYAVA--VSSGTAALHLA--LRALGIGPGDEVIVPSFTF 68 (352)
T ss_pred HHHHHHHcCC---ccCCHHHHHHHHHHHHHhCC--------CeEEE--ECCHHHHHHHH--HHHcCCCCCCEEEeCCcch
Confidence 4444444432 33445688999999999642 35666 78999999987 3333 46999999999999
Q ss_pred cchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEE
Q 012238 188 GNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFF 267 (467)
Q Consensus 188 ~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~ 267 (467)
..+...++..|++++.++++ +.++.+|++.+++.++ +++++++++ ||+|...+. ++|.++|+++|+++|+
T Consensus 69 ~~~~~~~~~~g~~~~~~~~~-~~~~~~d~~~l~~~i~---~~~~~v~~~---~~~G~~~~~---~~i~~l~~~~~i~li~ 138 (352)
T cd00616 69 VATANAILLLGATPVFVDID-PDTYNIDPELIEAAIT---PRTKAIIPV---HLYGNPADM---DAIMAIAKRHGLPVIE 138 (352)
T ss_pred HHHHHHHHHcCCeEEEEecC-CCcCCcCHHHHHHhcC---cCCeEEEEE---CCCCCcCCH---HHHHHHHHHcCCeEEE
Confidence 99999999999999999984 3467899999999885 566777764 589988765 4667779999999999
Q ss_pred eccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCc--cCcccCCCccceEEEecCCHHHHhh
Q 012238 268 DVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYS--KNLGLYAERIGAMNVVCSSSDLAAR 328 (467)
Q Consensus 268 Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~S--K~~~~~G~RiG~~~~v~~~~~~~~~ 328 (467)
|+++....... .. .+ .. ...+.+.|++ |.++ +.+.|+++ +.++++.+.
T Consensus 139 D~a~~~g~~~~---~~-~~----~~-~~d~~~~S~~~~K~~~--~~~gg~~~--~~~~~~~~~ 188 (352)
T cd00616 139 DAAQALGATYK---GR-KV----GT-FGDAGAFSFHPTKNLT--TGEGGAVV--TNDEELAER 188 (352)
T ss_pred ECCCCCCCeEC---CE-Ec----cc-CcceeEEcCCCCCCCc--ccCceEEE--ECCHHHHHH
Confidence 99975332110 00 00 00 1235667766 8774 33457774 566777765
No 243
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.75 E-value=3e-15 Score=150.21 Aligned_cols=320 Identities=12% Similarity=0.026 Sum_probs=191.4
Q ss_pred CCcEEecCcccCCCCCCCCchHHHHHHHHHHHhc-CCC-----CcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeee
Q 012238 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-GEN-----KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQ 156 (467)
Q Consensus 83 ~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~-~~~-----~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~ 156 (467)
.+.++|+...|. +... .|.++++..+.+.+ +.. .-++...-..+|.+.+|+++.. +..++
T Consensus 102 r~~l~FsSndYL---GL~~-~p~v~~a~~~ai~~yG~g~~gSrl~~G~~~~h~~LE~~LA~f~g~--------e~all-- 167 (476)
T PLN02955 102 KKLLLFSGNDYL---GLSS-HPTISNAAANAAKEYGMGPKGSALICGYTTYHRLLESSLADLKKK--------EDCLV-- 167 (476)
T ss_pred ceEEEeeccCcc---CCCC-CHHHHHHHHHHHHHcCCCCCCcCccccChHHHHHHHHHHHHHHCC--------CcEEE--
Confidence 368999988884 3333 66777777776643 110 1111122347899999999643 24444
Q ss_pred cCCchhHHHHHHHHHHH------------hCCCCEEEEcCCCCcchHHHHhhC----CCCeEEeeeecCCCCCCChhhHH
Q 012238 157 GLSGTGSLRLAAALIER------------YFPGAKVLISSPTWGNHKNIFNDA----RVPWSEYRYYDPKTVGLDFEGMI 220 (467)
Q Consensus 157 t~ggt~al~l~~~~l~~------------~~~gd~Vlv~~P~y~~~~~~~~~~----G~~~~~v~~~~~~~~~~d~~~l~ 220 (467)
.++|-.|...+...+.. ..++|.|+.-.-.+.....-++.. +++++.++. .|++.|+
T Consensus 168 ~sSGy~AN~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~a~~~~f~H-------ND~~~Le 240 (476)
T PLN02955 168 CPTGFAANMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQGNVEVFVYRH-------CDMYHLN 240 (476)
T ss_pred ECChHHHHHHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhccccCCceEEEeCC-------CCHHHHH
Confidence 56676665554222210 124455666556666666666665 456666554 5899999
Q ss_pred HHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEe
Q 012238 221 ADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQ 300 (467)
Q Consensus 221 ~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 300 (467)
+.++..+.+..+|++...-++.|.+.+.+ +|.++|++||.++|+||+|..+..+..... ....+--..+..|+++
T Consensus 241 ~~L~~~~~~~~~Vv~EgV~SmdGdiapL~---eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G--~~e~~g~~~di~ii~~ 315 (476)
T PLN02955 241 SLLSSCKMKRKVVVTDSLFSMDGDFAPME---ELSQLRKKYGFLLVIDDAHGTFVCGENGGG--VAEEFNCEADVDLCVG 315 (476)
T ss_pred HHHHhCCCCceEEEEeCCCCCCCCcCCHH---HHHHHHHHcCcEEEEcccccCceecCCCCc--HHHHhCCCCCCcEEEE
Confidence 99976555556777777889999998855 666668999999999999987776631111 1112211246789999
Q ss_pred cCccCcccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCc-cCCCch-HHHHHHHHHhCChhhHHHHHHHHH
Q 012238 301 SYSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPM-YSNPPV-HGARIVANVVGNPALFDEWKAEME 378 (467)
Q Consensus 301 S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~-~~~~~~~~~L~~~~~~~~~~~~l~ 378 (467)
||||.+|..| |++ ++++++++. ++...+.. ++...+ ....++...+. +. .. -.
T Consensus 316 TLsKA~G~~G---Gfi---~gs~~~~~~------------l~~~~~~~ifStalpp~~aaa~laal~---l~---~~-~~ 370 (476)
T PLN02955 316 TLSKAAGCHG---GFI---ACSKKWKQL------------IQSRGRSFIFSTAIPVPMAAAAYAAVV---VA---RK-EK 370 (476)
T ss_pred eCccchhccC---cee---ecHHHHHHH------------HHHhCCCCeecccccHHHHHHHHHHHH---HH---hc-CH
Confidence 9999988766 887 477877776 55443332 332222 22222222221 10 00 11
Q ss_pred HHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcce-EEecCCCH---HHHHHHHHcccEEEeCC-------C----eEE
Q 012238 379 MMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGM-FSFTGLNK---AQSDNMTNKWHVYMTKD-------G----RIS 443 (467)
Q Consensus 379 ~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~~~g~-f~~~~l~~---~~~~~ll~~~gI~v~~g-------g----Ris 443 (467)
..+++++++.+++.+. .|+ .. + ... .++++... ++.++|++ +||++.+- | ||+
T Consensus 371 ~~r~~L~~n~~~fr~~----~G~----~~--~-sPI~pI~ig~~~~a~~~~~~L~~-~Gi~v~~i~yPtVP~g~~rLRi~ 438 (476)
T PLN02955 371 WRRKAIWERVKEFKAL----SGV----DI--S-SPIISLVVGNQEKALKASRYLLK-SGFHVMAIRPPTVPPNSCRLRVT 438 (476)
T ss_pred HHHHHHHHHHHHHHHh----cCC----CC--C-CCEEEEEeCCHHHHHHHHHHHHH-CCCEEEEECCCCCCCCCceEEEe
Confidence 3445565655555542 232 22 1 222 34455322 33556665 59988643 2 888
Q ss_pred ecc-CChhhHHHHHHHHHHHHHh
Q 012238 444 LAG-LSLAKCEYLADAIIDSYHN 465 (467)
Q Consensus 444 ~~~-~~~~~i~~~~~~l~~~l~~ 465 (467)
+.. .+++++++++++|.++...
T Consensus 439 lsA~Ht~edId~lv~~L~~~~~~ 461 (476)
T PLN02955 439 LSAAHTTEDVKKLITALSSCLDF 461 (476)
T ss_pred eCCCCCHHHHHHHHHHHHHHHhh
Confidence 753 4889999999999988654
No 244
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.75 E-value=1.6e-15 Score=154.53 Aligned_cols=341 Identities=11% Similarity=0.032 Sum_probs=194.0
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCc--CCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCC
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKE--YLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 159 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~--Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g 159 (467)
+.+.||+..|..-..-|. -.|.|.+++.+.++...... ........+|-+.++++.... .+.+++ +++
T Consensus 42 G~~ylD~~~g~~~~~lGh--~~p~v~~a~~~q~~~~~~~~~~~~~~~~~~~la~~L~~~~~~~------~~~v~f--~~S 111 (433)
T PRK08117 42 GKEYLDFTSGIAVANVGH--RHPKVVQAIKEQADKLMHGPSGVIYYESILKLAEELAEITPGG------LDCFFF--SNS 111 (433)
T ss_pred CCEEEECCcchhhccCCC--CCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCC------CCEEEE--eCc
Confidence 357899988753222232 36788888888775421111 112334455666666653111 357888 999
Q ss_pred chhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHH-hhCC--------C-----CeEEeeeecCCC--CC--------CC
Q 012238 160 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF-NDAR--------V-----PWSEYRYYDPKT--VG--------LD 215 (467)
Q Consensus 160 gt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~-~~~G--------~-----~~~~v~~~~~~~--~~--------~d 215 (467)
|++|...+.++...+....+|+...-+|....... ...+ . .+..+|..+... .+ .|
T Consensus 112 GseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (433)
T PRK08117 112 GAEAIEGALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLEC 191 (433)
T ss_pred HHHHHHHHHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccCchhHHHHHH
Confidence 99999998654333433467888888886643221 1111 0 112233211000 00 15
Q ss_pred hhhHHHHHHc--CCCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhc
Q 012238 216 FEGMIADIKA--APGGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR 292 (467)
Q Consensus 216 ~~~l~~~l~~--~~~~~~~i~i~~p~NPTG~~-~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~ 292 (467)
++.+++.+++ .+.+..++++-....-.|.+ .+.+.+++|.++|++||+++|+||+|.+|...+ ..+....+ .-
T Consensus 192 ~~~l~~~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G---~~~~~~~~-gv 267 (433)
T PRK08117 192 LRDLESLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTG---EWFAAQTF-GV 267 (433)
T ss_pred HHHHHHHHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCccc---cchhHhhc-CC
Confidence 5667776653 22455566666555556665 478889999999999999999999999875432 11111111 11
Q ss_pred CCeEEEEecCccCcccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHH
Q 012238 293 GMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDE 372 (467)
Q Consensus 293 ~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~ 372 (467)
.++ +.+|||.++ .|+++|+++ +++++++. +.......+.+.+.+++.++...|+.- .
T Consensus 268 ~pD---i~t~sK~lg-~G~pigav~---~~~~i~~~------------~~~~~~~~T~~~np~~~aaa~a~L~~l--~-- 324 (433)
T PRK08117 268 VPD---IMTIAKGIA-SGLPLSAVV---ASKELMEQ------------WPLGSHGTTFGGNPVACAAALATLEVI--K-- 324 (433)
T ss_pred CCC---Eeehhhhcc-CCCcceeEE---EcHHHHhh------------ccCCCCCCCCCcCHHHHHHHHHHHHHH--H--
Confidence 122 469999999 899999985 77777766 432222233355667777776666421 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhccC--CCCCcccccCCcceEEecCC-------C---HHHHHHHHHcccEEEeCCC
Q 012238 373 WKAEMEMMAGRIKNVRQKLFDSLSAKDK--SGKDWSFILRQIGMFSFTGL-------N---KAQSDNMTNKWHVYMTKDG 440 (467)
Q Consensus 373 ~~~~l~~~~~~~~~~r~~l~~~l~~~~g--~~~~~~~~~~~~g~f~~~~l-------~---~~~~~~ll~~~gI~v~~gg 440 (467)
+ +...++++++.+++.+.|+ ++. .+. +.. .+..|.++.+.+ + ...+.+.+.++||++.+.|
T Consensus 325 --~--~~l~~~~~~~g~~l~~~L~-~l~~~~~~-~~~-vrg~Gl~~gi~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g 397 (433)
T PRK08117 325 --E--EKLLDNANEMGAYALERLE-VLKEKHPV-IGD-VRGIGLMIGIEIVDPDGEPDGDAVEKILDKCLEKGLLFYLCG 397 (433)
T ss_pred --h--ccHHHHHHHHHHHHHHHHH-HHHhcCCc-eee-eecCCcEEEEEEecCCCCcchHHHHHHHHHHHHCCCEEeecC
Confidence 0 1233344444455555554 331 111 111 223344433222 1 1223333445699886632
Q ss_pred ------eEEec-cCChhhHHHHHHHHHHHHHhc
Q 012238 441 ------RISLA-GLSLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 441 ------Ris~~-~~~~~~i~~~~~~l~~~l~~~ 466 (467)
||+.. ..+++++++++++|.++++++
T Consensus 398 ~~~~~lRl~p~~~~t~~~i~~~~~~l~~~l~~~ 430 (433)
T PRK08117 398 NAGNVLRMIPPLTVTKEEIDEGLDILDEALTEY 430 (433)
T ss_pred CCCCEEEEeCCccCCHHHHHHHHHHHHHHHHHH
Confidence 77752 348999999999999998764
No 245
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.74 E-value=2e-15 Score=151.57 Aligned_cols=192 Identities=18% Similarity=0.072 Sum_probs=134.4
Q ss_pred hHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHH-hCCCCEEE
Q 012238 103 LDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER-YFPGAKVL 181 (467)
Q Consensus 103 ~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~-~~~gd~Vl 181 (467)
.+...+++.+.+..+. |....+..+||+++++++... +.++ ++||++|+.++ +... +.+||+|+
T Consensus 9 ~~~~~~~v~~~~~~~~---~~~g~~~~~le~~la~~~g~~--------~~v~--~~sgt~al~~~--l~al~~~~Gd~Vi 73 (380)
T TIGR03588 9 DQDDIDAVVEVLKSDF---LTQGPTVPAFEEALAEYVGAK--------YAVA--FNSATSALHIA--CLALGVGPGDRVW 73 (380)
T ss_pred CHHHHHHHHHHHhcCC---ccCChhHHHHHHHHHHHHCCC--------eEEE--EcCHHHHHHHH--HHHcCCCCCCEEE
Confidence 4555777777665432 334456889999999997543 3444 57899999997 3333 56999999
Q ss_pred EcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCC-CCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHh
Q 012238 182 ISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP-GGSFILLHGCAHNPTGIDPTPEQWEKIADVIQE 260 (467)
Q Consensus 182 v~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~-~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~ 260 (467)
++.|+|..+...++..|++++.++++ ++++.+|++.+++.+++.+ ++++++++ .|++|...+ +++|.++|++
T Consensus 74 v~~~~~~~~~~~~~~~G~~~~~~~~~-~~~~~~d~~~l~~~i~~~~~~~t~~v~~---~~~~G~~~~---~~~i~~l~~~ 146 (380)
T TIGR03588 74 TTPITFVATANCALYCGAKVDFVDID-PDTGNIDEDALEKKLAAAKGKLPKAIVP---VDFAGKSVD---MQAIAALAKK 146 (380)
T ss_pred eCCcchHHHHHHHHHcCCEEEEEecC-CCcCCcCHHHHHHHhhcccCCCceEEEE---eCCCCccCC---HHHHHHHHHH
Confidence 99999999999999999999999985 3467899999999997321 24566664 467898765 5677777999
Q ss_pred cCCeeEEeccCCCCC-CCCCCCChhHHHHHHhcCCeEEEEecCc--cCcccCCCccceEEEecCCHHHHhh
Q 012238 261 KNHIPFFDVAYQGFA-SGSLDNDASSVRLFATRGMELLVAQSYS--KNLGLYAERIGAMNVVCSSSDLAAR 328 (467)
Q Consensus 261 ~~~~li~Deay~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~S~S--K~~~~~G~RiG~~~~v~~~~~~~~~ 328 (467)
+|++||+|+++.... ++. . .+.. ... ..+.+.||+ |.++. | ..|+++ +.++++.++
T Consensus 147 ~~~~lI~D~a~a~g~~~~~---~--~~g~-~~~--~d~~~~S~~~~K~~~~-~-~GG~v~--~~~~~~~~~ 205 (380)
T TIGR03588 147 HGLKIIEDASHALGAEYGG---K--PVGN-CRY--ADATVFSFHPVKIITT-A-EGGAVT--TNDEELAER 205 (380)
T ss_pred cCCEEEEECCCcccCccCC---E--eCCC-ccc--cceEEEecCCCCcccc-c-CceEEE--ECCHHHHHH
Confidence 999999999976432 221 1 1100 011 245566665 88864 3 345554 677877776
No 246
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.74 E-value=2.4e-15 Score=152.51 Aligned_cols=167 Identities=16% Similarity=0.051 Sum_probs=121.9
Q ss_pred hHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHH-------HhCCCCEEEEcCCCCcchHHHHhhCCCC
Q 012238 128 LAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIE-------RYFPGAKVLISSPTWGNHKNIFNDARVP 200 (467)
Q Consensus 128 ~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~-------~~~~gd~Vlv~~P~y~~~~~~~~~~G~~ 200 (467)
..+|++++|+++.. +++++ +++|++++.++...+. .+.|||+|+++.|+|..+...+...|++
T Consensus 65 ~~~fe~~lA~~~g~--------~~~v~--~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~~~G~~ 134 (438)
T PRK15407 65 NDAFEKKLAEFLGV--------RYALL--VNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVNPIIQNGLV 134 (438)
T ss_pred HHHHHHHHHHHhCC--------CeEEE--ECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHHHHHHHHcCCE
Confidence 57899999999743 35777 8999999998733221 2468999999999999999999999999
Q ss_pred eEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCC-CCCC
Q 012238 201 WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFA-SGSL 279 (467)
Q Consensus 201 ~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~-~~~~ 279 (467)
++.++++ ..++.+|++.+++.+. +++++|++++ ++|.. .++++|.++|+++|++||+|+++.... +.+
T Consensus 135 pv~vdvd-~~~~~id~~~le~~i~---~~tkaVi~~~---~~G~p---~dl~~I~~la~~~gi~vIeDaa~a~G~~~~g- 203 (438)
T PRK15407 135 PVFVDVE-LPTYNIDASLLEAAVS---PKTKAIMIAH---TLGNP---FDLAAVKAFCDKHNLWLIEDNCDALGSTYDG- 203 (438)
T ss_pred EEEEecC-CCcCCcCHHHHHHHcC---cCCeEEEEeC---CCCCh---hhHHHHHHHHHHCCCEEEEECccchhhhcCC-
Confidence 9999885 3578899999999886 5677777654 45653 457788888999999999999975432 211
Q ss_pred CCChhHHHHHHhcCCeEEEEecC--ccCcccCCCccceEEEecCCHHHHhh
Q 012238 280 DNDASSVRLFATRGMELLVAQSY--SKNLGLYAERIGAMNVVCSSSDLAAR 328 (467)
Q Consensus 280 ~~~~~~~~~~~~~~~~~i~~~S~--SK~~~~~G~RiG~~~~v~~~~~~~~~ 328 (467)
. .+ -..+ .+.+.|| +|.+. .|. -|+++ +.++++.++
T Consensus 204 ---~-~~---G~~g--d~~~fSf~~~k~~~-~ge-GG~l~--t~d~~l~~~ 241 (438)
T PRK15407 204 ---R-MT---GTFG--DIATLSFYPAHHIT-MGE-GGAVF--TNDPLLKKI 241 (438)
T ss_pred ---e-ee---eccC--ceEEEeCCCCCCcc-ccC-ceEEE--ECCHHHHHH
Confidence 0 01 0112 3445555 46665 455 37775 788888776
No 247
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.73 E-value=1.8e-15 Score=146.44 Aligned_cols=202 Identities=14% Similarity=0.067 Sum_probs=151.8
Q ss_pred CCCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhc----CCC--CcCCCCcchHHHHHHHHHHHhCCCCcccccCceee
Q 012238 81 TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER----GEN--KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVAT 154 (467)
Q Consensus 81 ~~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~----~~~--~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~ 154 (467)
.+.+.+.|..|.. .+.++.|.+++...... .+. ..|-+..+.++.|+.+|++++.. +.+|++
T Consensus 40 ~~~~~vyld~~at------~p~~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklInAd------~~dIiF 107 (428)
T KOG1549|consen 40 HGTRPVYLDNQAT------GPMDPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLINAD------PSDIVF 107 (428)
T ss_pred CCCccEEEecCcC------CCCCHHHHHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHHHhCCC------CCcEEE
Confidence 3456777776643 44588899998887732 221 22334566899999999998776 667988
Q ss_pred eecCCchhHHHHHHHHHHHhCCCC----EEEEcCCCCcchHH---HHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCC
Q 012238 155 VQGLSGTGSLRLAAALIERYFPGA----KVLISSPTWGNHKN---IFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP 227 (467)
Q Consensus 155 ~~t~ggt~al~l~~~~l~~~~~gd----~Vlv~~P~y~~~~~---~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~ 227 (467)
|.|+|++++++++-. ...++| .|+...-.|+.... .++..|++++.+|+. +++.+|.+.+++.++
T Consensus 108 --ts~ATEs~Nlvl~~v-~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~--~~~~~d~~~~~~~i~--- 179 (428)
T KOG1549|consen 108 --TSGATESNNLVLKGV-ARFFGDKTKKHIITLQTEHPCVLDSCRALQEEGLEVTYLPVE--DSGLVDISKLREAIR--- 179 (428)
T ss_pred --eCCchHHHHHHHHHh-hccccccccceEEEecccCcchhHHHHHHHhcCeEEEEeccC--ccccccHHHHHHhcC---
Confidence 999999999982221 123677 89988877766544 455789999999993 567799999999998
Q ss_pred CCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcc
Q 012238 228 GGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG 307 (467)
Q Consensus 228 ~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 307 (467)
++++++.+...+|-+|+++|.+ +|+++|+++++.+++|.+ |....- +.|. +.-.-.++..|.+|.||
T Consensus 180 ~~T~lv~I~~Vnn~~gv~~Pv~---EI~~icr~~~v~v~~DaA-QavG~i--~vDV-------~eln~D~~s~s~HK~yg 246 (428)
T KOG1549|consen 180 SKTRLVSIMHVNNEIGVLQPVK---EIVKICREEGVQVHVDAA-QAVGKI--PVDV-------QELNADFLSISAHKIYG 246 (428)
T ss_pred CCceEEEEEecccCccccccHH---HHHHHhCcCCcEEEeehh-hhcCCc--cccH-------HHcCchheeeecccccC
Confidence 7999999999999999999976 666679999999999999 444322 1221 12234567888999999
Q ss_pred cCCCccceEE
Q 012238 308 LYAERIGAMN 317 (467)
Q Consensus 308 ~~G~RiG~~~ 317 (467)
++| +|+++
T Consensus 247 p~~--iGaLY 254 (428)
T KOG1549|consen 247 PPG--IGALY 254 (428)
T ss_pred CCc--ceEEE
Confidence 999 89998
No 248
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.73 E-value=1.4e-14 Score=146.47 Aligned_cols=323 Identities=15% Similarity=0.141 Sum_probs=187.3
Q ss_pred CCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcC------CCCcchHHHHH----HHHHHHhCCCCcccccCce
Q 012238 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEY------LPIEGLAAFNK----VTAELLFGADNSVLKEQRV 152 (467)
Q Consensus 83 ~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y------~~~~G~~~lr~----aia~~l~~~~~~~~~~~~i 152 (467)
.+.|||-..++ +++|.+++++...+...+..+| .......+|.+ .++++++.. ..
T Consensus 28 ~~~~~l~~sen-------~~~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~~~la~l~g~~--------~a 92 (416)
T PRK13034 28 QDHLELIASEN-------FTSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAIERAKQLFGCD--------YA 92 (416)
T ss_pred hcCeeeccccc-------CCCHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHHHHHHHHhCCC--------ce
Confidence 36788886654 2478899988887522111211 11344677777 888886432 33
Q ss_pred -eeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcch-HHHHhh--CCCCe--EEeeeecCCCCCCChhhHHHHHHcC
Q 012238 153 -ATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNH-KNIFND--ARVPW--SEYRYYDPKTVGLDFEGMIADIKAA 226 (467)
Q Consensus 153 -~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~-~~~~~~--~G~~~--~~v~~~~~~~~~~d~~~l~~~l~~~ 226 (467)
+. +++|+.|+..+ +.+.+.|||+|++...+|... ..-++. .+... ..++.+ ..++.+|++.+++.++.
T Consensus 93 lv~--~~SG~~A~~~~--l~al~~~GD~Vl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~d~~~le~~l~~- 166 (416)
T PRK13034 93 NVQ--PHSGSQANGAV--YLALLKPGDTILGMSLSHGGHLTHGAKVSLSGKWYNAVQYGVD-RLTGLIDYDEVEELAKE- 166 (416)
T ss_pred EEe--cCCcHHHHHHH--HHHhcCCCCEEEEcCccceeeeecCCcceeccceeeeEEcccc-cccCCcCHHHHHHHHhh-
Confidence 33 58999999988 556678999999999988652 211111 11111 233332 33567999999998864
Q ss_pred CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCc
Q 012238 227 PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL 306 (467)
Q Consensus 227 ~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~ 306 (467)
.++++|++..+. +|...+ +.+|.++|+++|+++|+|++...-..+.. ... .....-.++++|++|.+
T Consensus 167 -~~~klVi~~~~~--~g~~~d---l~~l~~la~~~g~~livD~Aha~G~~~~g-~~~------~~~~~~Di~~~s~~K~l 233 (416)
T PRK13034 167 -HKPKLIIAGFSA--YPRELD---FARFREIADEVGALLMVDMAHIAGLVAAG-EHP------NPFPHAHVVTTTTHKTL 233 (416)
T ss_pred -cCCeEEEECCCc--cccccC---HHHHHHHHHHcCCEEEEeCcccccCcccC-CCC------CCCCCceEEEEeCcccC
Confidence 346777765544 355444 55677779999999999999543222210 000 01122468899999999
Q ss_pred ccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCc-cCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHH
Q 012238 307 GLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPM-YSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIK 385 (467)
Q Consensus 307 ~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~ 385 (467)
+.+. -|+++ +.++++... ++...... ..+.+.....++...+. .. ...+..+.++++.
T Consensus 234 ~g~~--GG~v~--~~~~~~~~~------------~~~~~~~~~~~~~~~~~~aa~~~al~--~~---~~~~~~~~~~~l~ 292 (416)
T PRK13034 234 RGPR--GGMIL--TNDEEIAKK------------INSAVFPGLQGGPLMHVIAAKAVAFG--EA---LQPEFKTYAKQVI 292 (416)
T ss_pred CCCC--CeEEE--ECcHHHHHH------------HHhhcCCcccCCccHHHHHHHHHHHH--HH---hChhHHHHHHHHH
Confidence 4332 25553 445544443 33322211 12222222222221111 11 0011235568888
Q ss_pred HHHHHHHHHhhhccCCCCCccccc--CCcceE-EecC---CCHHHHHHHHHcccEEEeC----------C---C-eEEec
Q 012238 386 NVRQKLFDSLSAKDKSGKDWSFIL--RQIGMF-SFTG---LNKAQSDNMTNKWHVYMTK----------D---G-RISLA 445 (467)
Q Consensus 386 ~~r~~l~~~l~~~~g~~~~~~~~~--~~~g~f-~~~~---l~~~~~~~ll~~~gI~v~~----------g---g-Ris~~ 445 (467)
++.++|.+.|+ +.|+ +... ++.... +.++ .+...+.+.|++.||++.. . + |++..
T Consensus 293 ~~a~~l~~~L~-~~G~----~~~~~~~~t~i~~v~~~~~~~~~~~~~~~L~~~GI~v~~~~~p~~~~~p~~~~~lR~~~~ 367 (416)
T PRK13034 293 ANAQALAEVLK-ERGY----DLVSGGTDNHLLLVDLRPKGLSGKDAEQALERAGITVNKNTVPGDTESPFVTSGIRIGTP 367 (416)
T ss_pred HHHHHHHHHHH-HcCC----EeccCCCCCcEEEEEcCCCCCCHHHHHHHHHhCCcEEeccCCCCCCcCCCCCCeeEeCcH
Confidence 88999999998 7774 4432 222222 2222 2556665666777999874 1 2 77643
Q ss_pred -----cCChhhHHHHHHHHHHHHHh
Q 012238 446 -----GLSLAKCEYLADAIIDSYHN 465 (467)
Q Consensus 446 -----~~~~~~i~~~~~~l~~~l~~ 465 (467)
.++++++++++++|.+++.+
T Consensus 368 ~~t~~~~~~~di~~l~~~l~~~~~~ 392 (416)
T PRK13034 368 AGTTRGFGEAEFREIANWILDVLDD 392 (416)
T ss_pred HHHhCCCCHHHHHHHHHHHHHHHhc
Confidence 34689999999999988764
No 249
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.73 E-value=3.8e-15 Score=150.82 Aligned_cols=156 Identities=17% Similarity=0.101 Sum_probs=120.0
Q ss_pred cchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcch----HHHHhhCCCCe
Q 012238 126 EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNH----KNIFNDARVPW 201 (467)
Q Consensus 126 ~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~----~~~~~~~G~~~ 201 (467)
.-..+|++.+|++.... ..++ +++|++|+.++ +...+.|||+|+++.+.|... ...++..|+++
T Consensus 63 p~~~~le~~lA~l~g~~--------~al~--~~SG~~Ai~~a--l~all~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v 130 (427)
T PRK05994 63 PTNAVLEERVAALEGGT--------AALA--VASGHAAQFLV--FHTLLQPGDEFIAARKLYGGSINQFGHAFKSFGWQV 130 (427)
T ss_pred ccHHHHHHHHHHHhCCC--------cEEE--EcCHHHHHHHH--HHHHhCCCCEEEEecCcchhHHHHHHHHHHhcCcEE
Confidence 34678899999996432 3445 69999999987 455678999999999999854 33467789988
Q ss_pred EEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCC
Q 012238 202 SEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDN 281 (467)
Q Consensus 202 ~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~ 281 (467)
+.++. .|++.+++.++ ++++++++++|+||||.+.+. ++|+++|+++|+++|+|+++......
T Consensus 131 ~~vd~-------~d~~~l~~ai~---~~tklV~vesp~NptG~v~dl---~~I~~la~~~gi~livD~a~a~~~~~---- 193 (427)
T PRK05994 131 RWADA-------DDPASFERAIT---PRTKAIFIESIANPGGTVTDI---AAIAEVAHRAGLPLIVDNTLASPYLI---- 193 (427)
T ss_pred EEECC-------CCHHHHHHhcC---cCCeEEEEECCCCCCCeecCH---HHHHHHHHHcCCEEEEECCccccccC----
Confidence 88765 37889998887 578899999999999999875 57777799999999999997632211
Q ss_pred ChhHHHHHHhcCCeEEEEecCccCcccCCCccceEE
Q 012238 282 DASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMN 317 (467)
Q Consensus 282 ~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~ 317 (467)
. ++ +. .-.+++.|++|.++-+|-.+|.++
T Consensus 194 ~--pl----~~-gaDivv~S~tK~lgg~~~~~gG~v 222 (427)
T PRK05994 194 R--PI----EH-GADIVVHSLTKFLGGHGNSMGGII 222 (427)
T ss_pred C--cc----cc-CCcEEEEcCccccCCCCCcEEEEE
Confidence 1 11 11 234889999999998887788876
No 250
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.72 E-value=1.8e-14 Score=140.23 Aligned_cols=191 Identities=19% Similarity=0.094 Sum_probs=136.7
Q ss_pred hHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEE
Q 012238 103 LDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLI 182 (467)
Q Consensus 103 ~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv 182 (467)
.+...+++.+.+..++. . .-.-..+|.++++++++.+ +.+. +++||.|+++++..+. +.|||.|++
T Consensus 14 ~~~e~~~v~~vl~sg~i-~--~G~~v~~FE~~~ae~~G~k--------~ava--~~sgT~AL~laL~al~-ig~GDeVI~ 79 (374)
T COG0399 14 GEEELAAVQEVLKSGWL-T--GGPFVRRFEQAFAEYLGVK--------YAVA--VSSGTAALHLALLALA-IGPGDEVIV 79 (374)
T ss_pred chHHHHHHHHHHHcCCe-e--cChHHHHHHHHHHHHhCCC--------eEEE--ecChHHHHHHHHHhcC-CCCCCEEEe
Confidence 56677777787776552 2 2334789999999997543 5666 7999999999843333 679999999
Q ss_pred cCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcC
Q 012238 183 SSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKN 262 (467)
Q Consensus 183 ~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~ 262 (467)
++-+|....+.+-..|++++.++++ ++++.+|++.++++|+ +++++|+..+-. |... ++++|.++|++||
T Consensus 80 ps~TfvATan~i~~~Ga~PVFvDid-~~T~nid~~~ie~aIt---~~tKAIipVhl~---G~~~---dm~~i~~la~~~~ 149 (374)
T COG0399 80 PSFTFVATANAVLLVGAKPVFVDID-PDTLNIDPDLIEAAIT---PRTKAIIPVHLA---GQPC---DMDAIMALAKRHG 149 (374)
T ss_pred cCCchHHHHHHHHHcCCeEEEEecC-CcccCCCHHHHHHHcc---cCCeEEEEehhc---cCCC---CHHHHHHHHHHcC
Confidence 9999999999999999999999995 5678899999999999 557777655432 5544 4557777799999
Q ss_pred CeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecCCHHHHhh
Q 012238 263 HIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAAR 328 (467)
Q Consensus 263 ~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~ 328 (467)
++||+|.+. .+... ..... .-..++-.++.+=-+|.+. +| --|.+ ++.++++.++
T Consensus 150 l~vIEDaAq-a~Ga~---y~gk~---vGt~Gd~~~fSF~~~K~it-tg-EGGav--~tnd~ela~k 204 (374)
T COG0399 150 LPVIEDAAQ-AHGAT---YKGKK---VGSFGDIGAFSFHATKNLT-TG-EGGAV--VTNDEELAEK 204 (374)
T ss_pred CeEEEEcch-hccCe---ecCcc---cccccceEEEEecCCCCcc-cc-CceEE--EeCCHHHHHH
Confidence 999999993 33321 01000 1112223333344468887 55 34555 4899999887
No 251
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.72 E-value=1e-14 Score=137.73 Aligned_cols=313 Identities=18% Similarity=0.083 Sum_probs=192.9
Q ss_pred chHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEE
Q 012238 102 VLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVL 181 (467)
Q Consensus 102 ~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vl 181 (467)
+.|.+++++.+.-. .....|+..+-..++.+.+++.+.. +.+++ +.+||++..++ +...+.||+.|+
T Consensus 12 ~~~~m~eam~~a~~-~~~~~YG~D~~~~~~e~~~ae~~g~--------~a~~F--v~sGT~aN~la--l~~~~~~~~~vi 78 (342)
T COG2008 12 PTPEMREALAAANA-VGDDVYGEDPTTNALEQRIAELFGK--------EAALF--VPSGTQANQLA--LAAHCQPGESVI 78 (342)
T ss_pred CCHHHHHHHHhccc-cCCCCCCCCHHHHHHHHHHHHHhCC--------ceEEE--ecCccHHHHHH--HHHhcCCCCeEE
Confidence 37889999888743 3457888888888888888888533 36777 89999999998 566678999999
Q ss_pred EcCCCCcchHH--HHhhCCCCeEEeeeecCCCCCCChhhHHHHHHc----CCCCcEEEEeCCCCCCCCCCCCHHHHHHHH
Q 012238 182 ISSPTWGNHKN--IFNDARVPWSEYRYYDPKTVGLDFEGMIADIKA----APGGSFILLHGCAHNPTGIDPTPEQWEKIA 255 (467)
Q Consensus 182 v~~P~y~~~~~--~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~----~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~ 255 (467)
+..-.+....+ ..+.++ ....++..+..++.++++.++..+.. +.+.+.+++ -+.+|--|++||.+++++|.
T Consensus 79 ~~~~aHi~~~E~Ga~~~~~-~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~-e~~~te~GtVy~l~el~~i~ 156 (342)
T COG2008 79 CHETAHIYTDECGAPEFFG-GGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVL-ENTATEGGTVYPLDELEAIS 156 (342)
T ss_pred EeccccceecccCcHHHHc-CCceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEE-eeccCCCceecCHHHHHHHH
Confidence 98866643322 223332 23444444456788999999998874 223344444 44455779999999999999
Q ss_pred HHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecCCHHHHhhhhhhhHH
Q 012238 256 DVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVI 335 (467)
Q Consensus 256 ~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~ 335 (467)
++|+++|+.|..|.+--.-..-....+.. .+ ..+ -.++..++||..+.|+ |.++ .++.+++++
T Consensus 157 ~~~k~~~l~LHmDGAR~~nA~valg~~~~---~~-~~~-~D~v~~~~tK~g~~~~---gAiv--~gn~~~~~~------- 219 (342)
T COG2008 157 AVCKEHGLPLHMDGARLANALVALGVALK---TI-KSY-VDSVSFCLTKGGGAPV---GAIV--FGNRDFAKR------- 219 (342)
T ss_pred HHHHHhCCceeechHHHHHHHHHcCCCHH---HH-Hhh-CCEEEEecccCCccee---eeEE--EcCHHHHHH-------
Confidence 99999999999999832211110111121 12 122 2355667899988774 8885 699999988
Q ss_pred HHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHH-HHHHHHHHHHHhhhccCCCCCcccccCCcce
Q 012238 336 QVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGR-IKNVRQKLFDSLSAKDKSGKDWSFILRQIGM 414 (467)
Q Consensus 336 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~-~~~~r~~l~~~l~~~~g~~~~~~~~~~~~g~ 414 (467)
+....++.... .+ -..+.......+|++.- | ...++ -.++...|.+.+++..|+ +...|.-..
T Consensus 220 -a~~~rK~~Ggl-~~-k~r~laA~~~~~l~~~~----~-----~~~~~Han~mA~~La~~~~~~~G~----~~~~~~~tN 283 (342)
T COG2008 220 -ARRWRKRAGGL-MR-KARFLAAQGLYALEDDV----W-----RLAADHANAMAARLAEGLEAKPGV----KLAFPVETN 283 (342)
T ss_pred -HHHHHHHhccc-Hh-hhhHHHHHHHHHHhccH----H-----HHHHHHHHHHHHHHHHhhhhcCCc----eeccCCccc
Confidence 44422222221 11 11122223333444431 1 11122 223356677777623353 444443333
Q ss_pred EEecCCCHHHHH-----HHHHcccEEEeCCC---eEE--eccCChhhHHHHHHHHHHHH
Q 012238 415 FSFTGLNKAQSD-----NMTNKWHVYMTKDG---RIS--LAGLSLAKCEYLADAIIDSY 463 (467)
Q Consensus 415 f~~~~l~~~~~~-----~ll~~~gI~v~~gg---Ris--~~~~~~~~i~~~~~~l~~~l 463 (467)
.+|+.++....+ ..+...|+.+.+++ |+. +.. ++++++.++..+++++
T Consensus 284 ~vf~~l~~~~i~~l~~~~~~~~~~~~~~~~~~~vRfvts~a~-~~edv~~~~~~~~~~~ 341 (342)
T COG2008 284 MVFVRLPESAIEALRLAGALFYRGVLIGAHGEIVRFVTSWAT-SEEDVDELVAAIKALL 341 (342)
T ss_pred EEEEECChHHHHHHHhhchhheeeeeccCCCceEEEEeeccC-CHHHHHHHHHHHHHhh
Confidence 666666543332 33334577777765 764 444 7899999999988764
No 252
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.71 E-value=1.8e-14 Score=146.91 Aligned_cols=341 Identities=11% Similarity=0.028 Sum_probs=193.0
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCch
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (467)
+...||+..|.--..-|. -.|.|.+++.+.++... .+....+..+.+..+++.+....... ..+++++ +++|+
T Consensus 55 G~~ylD~~~g~~~~~lGh--~~p~v~~ai~~q~~~~~--~~~~~~~~~~~~~~la~~l~~~~p~~-~~~~v~f--~~sGs 127 (443)
T PRK06058 55 GNRLIDLGSGIAVTSVGN--SAPRVVEAVREQVARFT--HTCFMVTPYEGYVAVAEQLNRLTPGD-HEKRSAL--FNSGA 127 (443)
T ss_pred CCEEEEcCcchhhhccCC--CCHHHHHHHHHHHHhcc--CccccccCCHHHHHHHHHHHHhCCCC-CCCEEEE--eCCcH
Confidence 457899988753122232 36788888888775421 11111122344445555554332100 0247777 89999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhh-CC--------C-----CeEEeeeecCCC----CCCC--------
Q 012238 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFND-AR--------V-----PWSEYRYYDPKT----VGLD-------- 215 (467)
Q Consensus 162 ~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~-~G--------~-----~~~~v~~~~~~~----~~~d-------- 215 (467)
+|.+.+.++...+...++|+...++|.++...... .+ . .+..+|.....+ ...+
T Consensus 128 eA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (443)
T PRK06058 128 EAVENAVKIARSYTGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARA 207 (443)
T ss_pred HHHHHHHHHHHHhhCCCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCcccccccccccchHHHHHHH
Confidence 99999866544444457899999999877543221 11 0 112222110100 0011
Q ss_pred hhhHHHHHHcCCCCcEEEEeCCCCCCCC-CC-CCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcC
Q 012238 216 FEGMIADIKAAPGGSFILLHGCAHNPTG-ID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRG 293 (467)
Q Consensus 216 ~~~l~~~l~~~~~~~~~i~i~~p~NPTG-~~-~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~ 293 (467)
++.+++.+. +++..+++ .-|-+..| .. .+.+.+++|.++|++||+++|.||++.+|...+ ..+.. ....-.
T Consensus 208 ~~~l~~~~~--~~~iAavi-~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG---~~fa~-~~~gv~ 280 (443)
T PRK06058 208 ITVIEKQVG--ADNLAAVI-IEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTG---AWFAC-EHEGIV 280 (443)
T ss_pred HHHHHHhhC--CCceEEEE-ECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCh---hhhHH-HhcCCC
Confidence 112222221 23444444 55666665 33 458889999999999999999999999885321 11211 111222
Q ss_pred CeEEEEecCccCcccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHH
Q 012238 294 MELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEW 373 (467)
Q Consensus 294 ~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~ 373 (467)
+++++ ++|.++ .|+++|+++ .++++.+. +.......+.+.+.+++.++.+.|+. +.
T Consensus 281 PDiv~---~gK~l~-~G~Pi~av~---~~~~i~~~------------~~~~~~~~T~~gnpl~~aaa~a~L~~--~~--- 336 (443)
T PRK06058 281 PDLIT---TAKGIA-GGLPLSAVT---GRAEIMDA------------PHPGGLGGTYGGNPVACAAALAAIET--IE--- 336 (443)
T ss_pred CCEEE---Eccccc-CCCccEEEE---EcHHHHhh------------ccCCCCCCCCCCCHHHHHHHHHHHHH--HH---
Confidence 34443 379999 899999995 67777766 43332233446677777777776642 11
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccC--CCCCcccccCCcceEEec--CC-----CHH----HHHHHHHcccEEEeCCC
Q 012238 374 KAEMEMMAGRIKNVRQKLFDSLSAKDK--SGKDWSFILRQIGMFSFT--GL-----NKA----QSDNMTNKWHVYMTKDG 440 (467)
Q Consensus 374 ~~~l~~~~~~~~~~r~~l~~~l~~~~g--~~~~~~~~~~~~g~f~~~--~l-----~~~----~~~~ll~~~gI~v~~gg 440 (467)
+ +...++.+++.+++.+.|+ ++. .+. ...+...|.++.+. +- +.+ +.+.+++ +||++.+++
T Consensus 337 -~--~~l~~~~~~~g~~l~~~L~-~l~~~~~~-i~~vrg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~-~Gv~~~~~~ 410 (443)
T PRK06058 337 -E--DDLVARARQIEALMTDRLR-ALAAEDDR-IGDVRGRGAMIAIELVKPGTTEPDAELTKALAAAAHA-AGVIVLTCG 410 (443)
T ss_pred -H--cCHHHHHHHHHHHHHHHHH-HHHhhCCc-EEeeeccceEEEEEEecCCCCCCcHHHHHHHHHHHHH-CCeEEeccC
Confidence 1 1344555566666666666 431 110 12245566655331 11 122 2344444 699998753
Q ss_pred ------eEEec-cCChhhHHHHHHHHHHHHHhc
Q 012238 441 ------RISLA-GLSLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 441 ------Ris~~-~~~~~~i~~~~~~l~~~l~~~ 466 (467)
||... .++++++++++++|.++++++
T Consensus 411 ~~~~~lr~~Ppl~~t~~~i~~~~~~l~~~l~~~ 443 (443)
T PRK06058 411 TYGNVIRLLPPLVIGDELLREGLDVLEAALADL 443 (443)
T ss_pred CCCCEEEEECCCccCHHHHHHHHHHHHHHHHhC
Confidence 66422 248899999999999998764
No 253
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.71 E-value=1.2e-14 Score=146.76 Aligned_cols=341 Identities=10% Similarity=-0.018 Sum_probs=189.5
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhc-CCCCcCCCCcchHHHHHHHHHHHhCCC--CcccccCceeeeecC
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-GENKEYLPIEGLAAFNKVTAELLFGAD--NSVLKEQRVATVQGL 158 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~-~~~~~Y~~~~G~~~lr~aia~~l~~~~--~~~~~~~~i~~~~t~ 158 (467)
+.+.||+..|.--..-| +-.|.|.+++.+.+.. ...... ....+.+..+++.|.... .... .+++.+ .++
T Consensus 34 G~~ylD~~~g~~~~~lG--h~~p~v~~ai~~ql~~~~~~~~~---~~~~~~~~~lae~l~~~~~~~~~~-~~~~~f-~~~ 106 (412)
T TIGR02407 34 GKEYIDFFAGAGALNYG--HNNPKLKQALIDYLADDGIIHSL---DMATEAKREFLETFNEIILKPRGL-DYKVQF-PGP 106 (412)
T ss_pred CCEEEEcccchhhccCC--CCCHHHHHHHHHHHhhccceecc---ccCcHHHHHHHHHHHHhccCccCC-CceEEE-eCC
Confidence 45789998775411222 2368888888887753 111111 111233344444443321 0001 123444 148
Q ss_pred CchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHh-hCCC------------CeEEeeeecCCC-CCCChhhHHHHHH
Q 012238 159 SGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-DARV------------PWSEYRYYDPKT-VGLDFEGMIADIK 224 (467)
Q Consensus 159 ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~-~~G~------------~~~~v~~~~~~~-~~~d~~~l~~~l~ 224 (467)
+|++|.+.+.++........+|+....+|.+...... ..|. .+..+|..+... ..-+++.+++.+.
T Consensus 107 sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~ 186 (412)
T TIGR02407 107 TGTNAVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLE 186 (412)
T ss_pred CchHHHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHHHH
Confidence 9999999986654444344689998988876643222 1111 122333211000 0124667788776
Q ss_pred cCC---CCcEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEe
Q 012238 225 AAP---GGSFILLHGCAHNPTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQ 300 (467)
Q Consensus 225 ~~~---~~~~~i~i~~p~NPTG~-~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 300 (467)
+.. ++..++++...+++.|. .++.+.+++|.++|++||+++|+||++.+|.-.+ ..+.. ......++++
T Consensus 187 ~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG---~~~a~-~~~~v~PDi~--- 259 (412)
T TIGR02407 187 DSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTG---TFFSF-EPAGIEPDIV--- 259 (412)
T ss_pred hccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccc---hhHHh-cccCCCCCEE---
Confidence 432 34567777778888998 6789999999999999999999999988774221 11111 1111223433
Q ss_pred cCccCcccC-CCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHH----hCChhhHHHHHH
Q 012238 301 SYSKNLGLY-AERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANV----VGNPALFDEWKA 375 (467)
Q Consensus 301 S~SK~~~~~-G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~----L~~~~~~~~~~~ 375 (467)
+++|.++ + |+|+|+++ .++++ +. +.......+.+.+.++..++... +.++.+ .+
T Consensus 260 ~~~K~lg-~~G~pigav~---~~~~~-~~------------~~~~~~~~T~~gnpl~~aaa~a~l~~~i~~~~l----~~ 318 (412)
T TIGR02407 260 CLSKSIS-GYGLPLALTL---IKPEL-DV------------WKPGEHNGTFRGNNLAFVTATAALEYYWSDDAF----EK 318 (412)
T ss_pred Eechhcc-CCccceeEEE---Echhh-hc------------cCCCccCCCCCccHHHHHHHHHHHHHHhcccHH----HH
Confidence 5789998 6 99999996 55554 43 22122222333444433333333 333322 23
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceEEecCCC-H----HHHHHHHHcccEEEeCCC------eEEe
Q 012238 376 EMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLN-K----AQSDNMTNKWHVYMTKDG------RISL 444 (467)
Q Consensus 376 ~l~~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~~~g~f~~~~l~-~----~~~~~ll~~~gI~v~~gg------Ris~ 444 (467)
.++++.+++++..+.+.+.+. .. ....+..|+++|+.+. . ++...++ ++||++.+.| ||+.
T Consensus 319 ~~~~~g~~l~~~l~~l~~~~~-~~------~~~vrg~Gl~~~l~l~~~~~~~~~~~~~~-~~Gv~v~~~~~~~~~lr~~p 390 (412)
T TIGR02407 319 AVQRKSEIIQERLDRIVAEYP-EL------IKQVRGRGLMQGIECGDGDLAGKIAKAAF-ENGLIIETSGPNDEVIKLLP 390 (412)
T ss_pred HHHHHHHHHHHHHHHHHhhCC-Cc------eEeeecceeEEEEEecChHHHHHHHHHHH-HCCCEEeccCCCCCEEEEEC
Confidence 344444444443333332221 11 1223456788888662 1 2344555 4699997643 7765
Q ss_pred cc-CChhhHHHHHHHHHHHHHh
Q 012238 445 AG-LSLAKCEYLADAIIDSYHN 465 (467)
Q Consensus 445 ~~-~~~~~i~~~~~~l~~~l~~ 465 (467)
.. ++++++++++++|.+++++
T Consensus 391 ~l~~t~~~i~~~~~~l~~~l~~ 412 (412)
T TIGR02407 391 PLTIDEETLQQGLDILEQAVEE 412 (412)
T ss_pred CCCCCHHHHHHHHHHHHHHHhC
Confidence 43 4889999999999999864
No 254
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.70 E-value=3.4e-14 Score=144.41 Aligned_cols=341 Identities=11% Similarity=0.033 Sum_probs=190.9
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCC---cCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecC
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENK---EYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGL 158 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~---~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ 158 (467)
+.+.+||..|..-..-|. -.|.|.+++.+.++..... .| +. +.+..+|+.+...... .-+++.+ ++
T Consensus 41 G~~ylD~~~g~~~~~lGh--~~p~v~~ai~~q~~~~~~~~~~~~-~~----~~~~~la~~l~~~~p~--~~~~v~f--~~ 109 (423)
T PRK05964 41 GRELIDAISSWWVATHGH--NHPYIDQAIREQLDRLDHVIFAGF-TH----EPAERLAQRLVALTPG--GLDHVFF--SD 109 (423)
T ss_pred CCEEEEcchhHHhccCCC--CCHHHHHHHHHHHhhCCCcccccc-CC----HHHHHHHHHHHHhCCC--CCCEEEE--eC
Confidence 457899988754222233 3678888888877542211 12 22 2333444444332110 1257888 99
Q ss_pred CchhHHHHHHHHHHHhC-----CC-CEEEEcCCCCcchHHHHhh-CCC------------CeEEeeeecCCCCCCChhhH
Q 012238 159 SGTGSLRLAAALIERYF-----PG-AKVLISSPTWGNHKNIFND-ARV------------PWSEYRYYDPKTVGLDFEGM 219 (467)
Q Consensus 159 ggt~al~l~~~~l~~~~-----~g-d~Vlv~~P~y~~~~~~~~~-~G~------------~~~~v~~~~~~~~~~d~~~l 219 (467)
+|++|.+.+.++...+. +| .+|+...-+|.+....... .+- .+..++....+....+++.+
T Consensus 110 sGseA~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l 189 (423)
T PRK05964 110 SGSVAVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPDGYEQATLDAL 189 (423)
T ss_pred CcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcchhHHHHHHHH
Confidence 99999999866554431 23 5899999888764432221 111 12222221000001127788
Q ss_pred HHHHHcCCCCcEEEEeCC-CCCCCCCCC-CHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEE
Q 012238 220 IADIKAAPGGSFILLHGC-AHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELL 297 (467)
Q Consensus 220 ~~~l~~~~~~~~~i~i~~-p~NPTG~~~-~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i 297 (467)
++.+.+.+++...+++.. .+...|... +.+.+++|.++|++||+++|+||++.++...+ ..+.. ......+++
T Consensus 190 ~~~l~~~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G---~~~a~-~~~~v~pDi- 264 (423)
T PRK05964 190 EALLEKHAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTG---TLFAC-EQAGVSPDI- 264 (423)
T ss_pred HHHHHhCCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCc---chhHH-HhcCCCCCe-
Confidence 888865444555555544 477778766 89999999999999999999999988775322 11111 111122233
Q ss_pred EEecCccCcccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhh------ccCccCCCchHHHHHHHHHhCChhhHH
Q 012238 298 VAQSYSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRL------ARPMYSNPPVHGARIVANVVGNPALFD 371 (467)
Q Consensus 298 ~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~~~~~~~L~~~~~~~ 371 (467)
-+++|.++..++++|+++ .++++.+. +... ....+.+.+.++..++...|+- +
T Consensus 265 --~~~~K~l~gG~~p~~av~---~~~~i~~~------------~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~--l-- 323 (423)
T PRK05964 265 --MCLSKGLTGGYLPLAATL---CTAEIFEA------------FYSDDRAKAFMHSPSYTANPLACAAANASLDL--F-- 323 (423)
T ss_pred --eeeehhhhcCcccceEEE---EcHHHHHh------------hhcCCcccccccCCCCCcCHHHHHHHHHHHHH--H--
Confidence 367899984448999984 77887776 3211 1111223455555555544431 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcc-CCCCCcccccCCcceE-EecC-CC----H-HHHHHHHHcccEEEeCCC---
Q 012238 372 EWKAEMEMMAGRIKNVRQKLFDSLSAKD-KSGKDWSFILRQIGMF-SFTG-LN----K-AQSDNMTNKWHVYMTKDG--- 440 (467)
Q Consensus 372 ~~~~~l~~~~~~~~~~r~~l~~~l~~~~-g~~~~~~~~~~~~g~f-~~~~-l~----~-~~~~~ll~~~gI~v~~gg--- 440 (467)
++ +...++..+.-+++.+.|+ ++ ..+. +......|.++ +.+. .+ . .+.+.++ ++||++.+.+
T Consensus 324 --~~--~~~~~~~~~~g~~l~~~l~-~l~~~~~-i~~vrg~Gl~~~i~l~~~~~~~~~~~l~~~l~-~~Gv~v~~~~~~l 396 (423)
T PRK05964 324 --ED--EPVLERVAALSAGLAEGLE-PFRDLPG-VADVRVLGAIGAVELDRPVLERDGPALRAFAL-ERGVLLRPLGNTI 396 (423)
T ss_pred --Hh--cCHHHHHHHHHHHHHHHHH-hhccCCC-eEEeecccEEEEEEeccCcchhHHHHHHHHHH-HCCeEEEecCCEE
Confidence 00 1233444444555555555 43 1211 11123334332 1122 11 2 2344554 4699998765
Q ss_pred eEEec-cCChhhHHHHHHHHHHHHHhc
Q 012238 441 RISLA-GLSLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 441 Ris~~-~~~~~~i~~~~~~l~~~l~~~ 466 (467)
||+.. ..+++++++++++++++++++
T Consensus 397 R~~p~l~~t~edId~~v~~l~~al~~~ 423 (423)
T PRK05964 397 YLMPPYIITAEELDRITDAIVEVADEL 423 (423)
T ss_pred EEeCCcccCHHHHHHHHHHHHHHHhhC
Confidence 78755 238899999999999999874
No 255
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.70 E-value=1.3e-14 Score=148.45 Aligned_cols=327 Identities=13% Similarity=0.095 Sum_probs=189.8
Q ss_pred CCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCC---Ccc------hHH-HHHHHHHHHhCCCCcccccCce
Q 012238 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLP---IEG------LAA-FNKVTAELLFGADNSVLKEQRV 152 (467)
Q Consensus 83 ~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~---~~G------~~~-lr~aia~~l~~~~~~~~~~~~i 152 (467)
.+.|+|-.+++ . ++|.+++++...+...+..+++. ..| +++ .|+.++++++.+ ++++
T Consensus 34 ~~~l~l~~sen------~-~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~lf~a~------~~~~ 100 (452)
T PTZ00094 34 IEGLELIASEN------F-TSRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALEAFGLD------PEEW 100 (452)
T ss_pred HcCeeEecccc------c-CCHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHHHhCCC------cccc
Confidence 36899998765 2 37889988888774432112211 112 332 566778886543 4555
Q ss_pred ee-eecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhh----------CCCCeEEeeeecCCCCCCChhhHHH
Q 012238 153 AT-VQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFND----------ARVPWSEYRYYDPKTVGLDFEGMIA 221 (467)
Q Consensus 153 ~~-~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~----------~G~~~~~v~~~~~~~~~~d~~~l~~ 221 (467)
.+ +++.+|+++..++ +...+.+||+|++....+..+...... .+.++..++. +.++.+|++.+++
T Consensus 101 ~~~~~~~sgt~an~~v--~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~--~~~g~id~~~L~~ 176 (452)
T PTZ00094 101 GVNVQPYSGSPANFAV--YTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQV--NEKGLIDYDKLEE 176 (452)
T ss_pred eeecCCCchHHHHHHH--HHHhcCCCCEEEecccccCCcccccccccccccccceeeeeeeeccc--CCCCCcCHHHHHH
Confidence 33 3347899999887 445577999999987666554332211 1123334444 2247799999999
Q ss_pred HHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEec
Q 012238 222 DIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQS 301 (467)
Q Consensus 222 ~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S 301 (467)
.+++. +++++++. ++.+|...+.+ +|.++|+++|+++++|++.. +..-..+....++ ..-.+++.|
T Consensus 177 ~l~~~--~~~lvi~~--~s~~g~~~di~---~I~~i~~~~ga~l~vDaaq~-~G~i~~~~~~~~~------~~~D~l~~S 242 (452)
T PTZ00094 177 LAKAF--RPKLIIAG--ASAYPRDIDYK---RFREICDSVGAYLMADIAHT-SGLVAAGVLPSPF------PYADVVTTT 242 (452)
T ss_pred HHHHh--CCCEEEEe--CCCCCCccCHH---HHHHHHHHcCCEEEEeccch-hccccCCCCCCCC------CCCcEEEcC
Confidence 99742 34455543 34589888876 55566999999999999943 3321111101111 123588999
Q ss_pred CccCc-ccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCcc-CCCchHHHHHHHHHhCChhhHHHHHHHHHH
Q 012238 302 YSKNL-GLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMY-SNPPVHGARIVANVVGNPALFDEWKAEMEM 379 (467)
Q Consensus 302 ~SK~~-~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~ 379 (467)
.+|++ |+. -|++. + .++..+. +...+.....+.+ ++++.....++..++.. + .....++
T Consensus 243 ~hK~l~GP~---Gg~l~--~-~~~~~~~--------l~~~~~~~~~p~~~G~~~~~~iaal~~al~~--~---~~~~~~~ 303 (452)
T PTZ00094 243 THKSLRGPR---SGLIF--Y-RKKVKPD--------IENKINEAVFPGLQGGPHNHQIAAIAVQLKE--V---QSPEWKE 303 (452)
T ss_pred CccCCCCCC---ceEEE--E-ecccchH--------HHHhhccccCCCCCCCchHHHHHHHHHHHHH--H---hChhHHH
Confidence 99976 433 36664 2 3334333 2221221111211 12333332233333321 0 0123456
Q ss_pred HHHHHHHHHHHHHHHhhhccCCCCCcccccCC--cceEE-ec---CCCHHHHHHHHHcccEEEeC------------CC-
Q 012238 380 MAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQ--IGMFS-FT---GLNKAQSDNMTNKWHVYMTK------------DG- 440 (467)
Q Consensus 380 ~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~~--~g~f~-~~---~l~~~~~~~ll~~~gI~v~~------------gg- 440 (467)
..+++.++++++.+.|. +.|+ ++..+. ....+ .+ +.+.+.+..+|+++||.+.. ++
T Consensus 304 ~~~~i~~l~~~l~~~L~-~~g~----~v~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~vs~~~~p~~~~~~~~~~v 378 (452)
T PTZ00094 304 YAKQVLKNAKALAAALE-KRGY----DLVTGGTDNHLVLVDLRPFGITGSKMEKLLDAVNISVNKNTIPGDKSALNPSGV 378 (452)
T ss_pred HHHHHHHHHHHHHHHHH-hCCc----EEecCCCCCceEeecCCcCCCCHHHHHHHHHHCCcEEecccCCCCCcCCCCCeE
Confidence 77888889999999998 6663 333211 11111 11 34667777788888999942 23
Q ss_pred eEEeccC-----ChhhHHHHHHHHHHHHH
Q 012238 441 RISLAGL-----SLAKCEYLADAIIDSYH 464 (467)
Q Consensus 441 Ris~~~~-----~~~~i~~~~~~l~~~l~ 464 (467)
|+|+..+ ++++++++++.|.++++
T Consensus 379 Ris~~~~tt~g~~~~di~~l~~~l~~~~~ 407 (452)
T PTZ00094 379 RLGTPALTTRGAKEKDFKFVADFLDRAVK 407 (452)
T ss_pred EECCHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 8886543 37999999999999886
No 256
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.69 E-value=5.2e-14 Score=142.90 Aligned_cols=346 Identities=13% Similarity=0.073 Sum_probs=187.6
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhc-CCCCc-CCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCC
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-GENKE-YLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 159 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~-~~~~~-Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g 159 (467)
+.+.||+..|.--..-|. -.|.|.+++.+.+.. ..... +.......+|-+.+++.+....+ . .+.+.+ .+++
T Consensus 38 G~~ylD~~~g~~~~~lGh--~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~lae~l~~~~~~~~~--~-~~~~~f-~~~s 111 (425)
T PRK09264 38 GKEYIDFFAGAGALNYGH--NNPVLKQALIDYLQRDGITHGLDMHTTAKREFLETFEETILKPRG--L-DYKVQF-TGPT 111 (425)
T ss_pred CCEeeecccchhhccCCC--CCHHHHHHHHHHHHhcccccccccCcHHHHHHHHHHHHhhcCCcC--C-CceEEE-eCCC
Confidence 457899988754222232 367888888887753 11111 11122222344444443211100 1 124544 1479
Q ss_pred chhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHH-hhC---------CC---CeEEeeeecCCCC-CCChhhHHHHHHc
Q 012238 160 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF-NDA---------RV---PWSEYRYYDPKTV-GLDFEGMIADIKA 225 (467)
Q Consensus 160 gt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~-~~~---------G~---~~~~v~~~~~~~~-~~d~~~l~~~l~~ 225 (467)
|++|.+.+.++........+|+....+|.+..... ... |. .+..+|..+.... .-|++.+++.+++
T Consensus 112 GseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~ 191 (425)
T PRK09264 112 GTNAVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLED 191 (425)
T ss_pred HHHHHHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHHHHh
Confidence 99999998666544444468888888887654321 111 11 2333333110000 1367788888864
Q ss_pred CC---CCcEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEec
Q 012238 226 AP---GGSFILLHGCAHNPTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQS 301 (467)
Q Consensus 226 ~~---~~~~~i~i~~p~NPTG~-~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S 301 (467)
.. +...++++-..+.-.|. .++.+.+++|.++|++||+++|+||++.++...+ ..+.... ....+++ .+
T Consensus 192 ~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG---~~~~~~~-~~v~PDi---~t 264 (425)
T PRK09264 192 SSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTG---TFFSFER-AGITPDI---VT 264 (425)
T ss_pred ccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCcccc---HHHHHhh-cCCCCCE---EE
Confidence 31 23456666655655676 5688999999999999999999999998764321 1111111 1222343 36
Q ss_pred CccCcccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHH
Q 012238 302 YSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMA 381 (467)
Q Consensus 302 ~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~ 381 (467)
++|.++..|+++|+++ .++++ .. +.......+.+.+.++..++...|.+ + |++ ....
T Consensus 265 ~~K~l~~~G~pigav~---~~~~i-~~------------~~~~~~~~T~~gnp~~~aaa~a~l~~--~---~~~--~~l~ 321 (425)
T PRK09264 265 LSKSISGYGLPMALVL---IKPEL-DV------------WKPGEHNGTFRGNNLAFVTATAALEE--Y---WSD--DAFE 321 (425)
T ss_pred eccccCCCccceEEEE---Echhh-hc------------cCCCccCCCCCCCHHHHHHHHHHHHH--H---Hhh--hHHH
Confidence 6899995599999996 55554 33 22211111223334444444344421 1 111 1234
Q ss_pred HHHHHHHHHHHHHhhhcc--CCCCCcccccCCcceEEecCCC-H----HHHHHHHHcccEEEeCCC----eEEec-c--C
Q 012238 382 GRIKNVRQKLFDSLSAKD--KSGKDWSFILRQIGMFSFTGLN-K----AQSDNMTNKWHVYMTKDG----RISLA-G--L 447 (467)
Q Consensus 382 ~~~~~~r~~l~~~l~~~~--g~~~~~~~~~~~~g~f~~~~l~-~----~~~~~ll~~~gI~v~~gg----Ris~~-~--~ 447 (467)
++++++.+++.+.|+ ++ ..|. +.......|+++++.+. . .+...+++ .||.+.+.| ||.+. . .
T Consensus 322 ~~~~~~g~~l~~~l~-~l~~~~~~-~~~~vrg~Gl~~~i~l~~~~~~~~l~~~~~~-~Gv~~~~~~~~~~~lr~~p~l~~ 398 (425)
T PRK09264 322 KEVKAKGELVRERLE-EIAAKYPG-LGAEVRGRGMMQGIDFGDGELAGKIAAEAFE-NGLIIETSGPEDEVVKLLPPLTI 398 (425)
T ss_pred HHHHHHHHHHHHHHH-HHHHhCCC-ceecceecccEEEEEecChHHHHHHHHHHHH-CCCEEeccCCCCCEEEEeCCCCC
Confidence 444444555555444 32 1111 11112334666676552 1 33445554 699998754 66555 2 3
Q ss_pred ChhhHHHHHHHHHHHHHhc
Q 012238 448 SLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 448 ~~~~i~~~~~~l~~~l~~~ 466 (467)
+++++++++++|.++++++
T Consensus 399 t~~ei~~~~~~l~~~l~~~ 417 (425)
T PRK09264 399 DEEELEEGLDILEEAVAEV 417 (425)
T ss_pred CHHHHHHHHHHHHHHHHHH
Confidence 7899999999999998753
No 257
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.69 E-value=2.8e-14 Score=141.35 Aligned_cols=318 Identities=13% Similarity=0.095 Sum_probs=193.9
Q ss_pred HHHHHH-HHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEE
Q 012238 104 DVVKKA-ENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLI 182 (467)
Q Consensus 104 ~~v~~a-~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv 182 (467)
..+.++ +..+.. +. ..|.......+|.+++++++.. ++++. +++|+.|++++ +...+.|||.|
T Consensus 50 ~aMs~~q~a~~~~-GD-e~yag~~s~~~lE~~va~~~G~--------~~av~--v~sGT~Al~ll--~~l~l~pGDeV-- 113 (450)
T TIGR02618 50 NAMSDKQWAGLMM-GD-EAYAGSRNFYHLERTVRELYGF--------KYVVP--THQGRGAENLL--SQIAIKPGDYV-- 113 (450)
T ss_pred HHHHHHHHHHhhh-cc-hhhcCCCcHHHHHHHHHHHHCC--------CeEEE--cCCHHHHHHHH--HHhCCCCcCEE--
Confidence 445554 333332 32 4588888899999999999653 36777 99999999986 33346799977
Q ss_pred cCCCCcch-HHHHhhCCCCeEEeeee--------cCCCCCCChhhHHHHHHcCC-CCcEEEEeCCCCC-CCCCCCCHHHH
Q 012238 183 SSPTWGNH-KNIFNDARVPWSEYRYY--------DPKTVGLDFEGMIADIKAAP-GGSFILLHGCAHN-PTGIDPTPEQW 251 (467)
Q Consensus 183 ~~P~y~~~-~~~~~~~G~~~~~v~~~--------~~~~~~~d~~~l~~~l~~~~-~~~~~i~i~~p~N-PTG~~~~~~~l 251 (467)
++++|... ...++..|+.++.++.+ ++.++.+|++.+++.+++.. .++.++.+.+++| ..|..++.+++
T Consensus 114 psn~~f~Tt~ahIe~~Gav~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l 193 (450)
T TIGR02618 114 PGNMYFTTTRYHQEKNGATFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANM 193 (450)
T ss_pred CCceeHHHHHHHHHhCCeEEEeeecccccccccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHH
Confidence 77777444 44478889866666443 24567899999999998532 2344556666677 55899999999
Q ss_pred HHHHHHHHhcCCeeEEeccCCC-CCCC----CCCCChhHH----HHHHhcCCeEEEEecCccCcccCCCccceEEEecCC
Q 012238 252 EKIADVIQEKNHIPFFDVAYQG-FASG----SLDNDASSV----RLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 322 (467)
Q Consensus 252 ~~l~~~~~~~~~~li~Deay~~-~~~~----~~~~~~~~~----~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~ 322 (467)
+++.++|++||+.||.|.+... -.+- .......++ +.+.... ..+..|..|..+.+ +|.++ ++.+
T Consensus 194 ~~I~elA~~~Gl~vi~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~a--D~~~~S~~Kd~~~~---~GG~l-~~~d 267 (450)
T TIGR02618 194 REVRELCEAHGIKVFYDATRCVENAYFIKEREQGYEDKSIAEILKEMMSYA--DGCTMSGKKDCLVN---IGGFL-CMND 267 (450)
T ss_pred HHHHHHHHHcCCEEEEEccchhhChhhhhcccccccCCCHHHHHHHHhccC--cEEEEeeccCCCCC---CceEE-EeCC
Confidence 9999999999999999998432 1110 000111123 2333322 23788999998766 35443 2588
Q ss_pred HHHHhhhhhhhHHHHHHHHHhhccCc--cCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 012238 323 SDLAARCCEVAVIQVKSQLKRLARPM--YSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK 400 (467)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g 400 (467)
++++++ .+...... ..+ +.....-...+++..|.+. ..+ ....+-....++|.+.|. +.|
T Consensus 268 ~~l~~k--------~r~~~~~~-eG~~tyGgla~r~~~ala~gL~e~-~~~-------~y~~~r~~~a~~La~~L~-~~G 329 (450)
T TIGR02618 268 DEMFQS--------AKELVVVF-EGMPSYGGLAGRDMEAMAIGIREA-VDY-------EYIEHRVKQVRYLGDKLK-AAG 329 (450)
T ss_pred HHHHHH--------HHHHhhhc-CCccccCchhhhhHHHHHHHHHHh-hhH-------HHHHHHHHHHHHHHHHHH-HCC
Confidence 988887 33321111 111 1111221222222223211 111 111112224567888888 777
Q ss_pred CCCCcccccCCcceEEecCC-------C------HHHHHHHHHcccEEEeCC-----------C----------eEEecc
Q 012238 401 SGKDWSFILRQIGMFSFTGL-------N------KAQSDNMTNKWHVYMTKD-----------G----------RISLAG 446 (467)
Q Consensus 401 ~~~~~~~~~~~~g~f~~~~l-------~------~~~~~~ll~~~gI~v~~g-----------g----------Ris~~~ 446 (467)
+ .+..|.+|--+|++. . ..++.+|-.+.||-...- | |+.+..
T Consensus 330 v----pv~~p~ggh~V~vda~~~lph~~~~~~p~~al~~~ly~~~gir~~e~g~~~~~~~~~~~~~~~~~~el~rlaipr 405 (450)
T TIGR02618 330 V----PIVEPVGGHAVFLDARRFLPHIPQDQFPAQSLAASIYVETGVRSMERGIVSAGRNNVTGEHHRPKLELVRLTIPR 405 (450)
T ss_pred C----cccCCCCcceEEEEhHHhCCCCChhhChHHHHHHHHHHHhCccEEeecceecccCCCCCcccCCccceeeecccc
Confidence 5 455666665566532 1 234455556667743321 1 887753
Q ss_pred --CChhhHHHHHHHHHHHHHh
Q 012238 447 --LSLAKCEYLADAIIDSYHN 465 (467)
Q Consensus 447 --~~~~~i~~~~~~l~~~l~~ 465 (467)
.+.+++++++++|..+.++
T Consensus 406 r~yt~~h~~~v~~~~~~~~~~ 426 (450)
T TIGR02618 406 RVYTYAHMDVVADGIIKLYKH 426 (450)
T ss_pred ccccHhHHHHHHHHHHHHHhh
Confidence 4778999999999988764
No 258
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.69 E-value=3e-14 Score=144.11 Aligned_cols=156 Identities=21% Similarity=0.174 Sum_probs=121.5
Q ss_pred cchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHH----hhCCCCe
Q 012238 126 EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF----NDARVPW 201 (467)
Q Consensus 126 ~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~----~~~G~~~ 201 (467)
+-..+|++.+|++.... ..++ +++|++|++++ +...+.+||+|+++...|......+ +..|+++
T Consensus 64 p~~~~le~~lA~l~g~~--------~av~--~sSGt~Al~~a--l~~ll~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v 131 (433)
T PRK08134 64 PTVAVLEERVAALEGGV--------GAIA--TASGQAALHLA--IATLMGAGSHIVASSALYGGSHNLLHYTLRRFGIET 131 (433)
T ss_pred hHHHHHHHHHHHHhCCC--------cEEE--eCCHHHHHHHH--HHHHhCCCCEEEEeCCccHHHHHHHHHHHhhCCeEE
Confidence 44788999999996543 3456 89999999998 4555779999999999997654443 4589988
Q ss_pred EEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCC
Q 012238 202 SEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDN 281 (467)
Q Consensus 202 ~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~ 281 (467)
+.++.. |++.+++.++ +++++|++.+++||||.+.+.+ +|+++|+++|+++|+|.++..-...
T Consensus 132 ~~vd~~-------d~~~l~~~i~---~~TklV~~e~~~np~g~v~Di~---~I~~la~~~gi~livD~t~a~~~~~---- 194 (433)
T PRK08134 132 TFVKPG-------DIDGWRAAIR---PNTRLLFGETLGNPGLEVLDIP---TVAAIAHEAGVPLLVDSTFTTPYLL---- 194 (433)
T ss_pred EEECCC-------CHHHHHHhcC---CCCeEEEEECCCcccCcccCHH---HHHHHHHHcCCEEEEECCCcccccC----
Confidence 888751 7899999987 6788999999999999998865 6777799999999999996432211
Q ss_pred ChhHHHHHHhcCCeEEEEecCccCcccCCCccceEE
Q 012238 282 DASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMN 317 (467)
Q Consensus 282 ~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~ 317 (467)
. ++ +. .-.+++.|.+|.++.+|..+|.++
T Consensus 195 ~--pl----~~-GaD~vv~S~tK~l~g~g~~~gG~v 223 (433)
T PRK08134 195 R--PF----EH-GADLVYHSATKFLGGHGTAIGGVL 223 (433)
T ss_pred C--ch----hc-CCCEEEeccccccCCCCCceEEEE
Confidence 1 11 11 235889999999998998888876
No 259
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.68 E-value=1.2e-15 Score=134.65 Aligned_cols=166 Identities=22% Similarity=0.159 Sum_probs=123.7
Q ss_pred hHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchH-HHHhhCCCCeEEeee
Q 012238 128 LAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHK-NIFNDARVPWSEYRY 206 (467)
Q Consensus 128 ~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~-~~~~~~G~~~~~v~~ 206 (467)
..++++.++++++. +.+++++ +.|+++++.++ +.....+|++|+++.|+|..+. ..++..|++++.++.
T Consensus 2 ~~~~~~~l~~~~~~------~~~~~~~--~~~~t~a~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~ 71 (170)
T cd01494 2 LEELEEKLARLLQP------GNDKAVF--VPSGTGANEAA--LLALLGPGDEVIVDANGHGSRYWVAAELAGAKPVPVPV 71 (170)
T ss_pred HHHHHHHHHHHcCC------CCCcEEE--eCCcHHHHHHH--HHHhCCCCCEEEEeecccceehhhHHHhcCCEEEEecc
Confidence 35789999999741 2567888 88999999998 3333557999999999998888 888999999999987
Q ss_pred ecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHH
Q 012238 207 YDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSV 286 (467)
Q Consensus 207 ~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~ 286 (467)
++......+.+.+++... ..++.++++++++||+|...+. ++|+++|+++|+++|+|++|..+...... .
T Consensus 72 ~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~g~~~~~---~~l~~~~~~~~~~li~D~a~~~~~~~~~~---~-- 141 (170)
T cd01494 72 DDAGYGGLDVAILEELKA--KPNVALIVITPNTTSGGVLVPL---KEIRKIAKEYGILLLVDAASAGGASPAPG---V-- 141 (170)
T ss_pred CCCCccchhhhhhhhccc--cCceEEEEEecCcCCCCeEcCH---HHHHHHHHHcCCEEEEecccccccccccc---c--
Confidence 533322233334544333 2677899999999999999887 56777799999999999999887754211 0
Q ss_pred HHHHhcCCeEEEEecCccCcccCCCccceEE
Q 012238 287 RLFATRGMELLVAQSYSKNLGLYAERIGAMN 317 (467)
Q Consensus 287 ~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~ 317 (467)
. .......+++.|++|.++. .++|+++
T Consensus 142 -~-~~~~~~d~~~~s~~K~~~~--~~~G~l~ 168 (170)
T cd01494 142 -L-IPEGGADVVTFSLHKNLGG--EGGGVVI 168 (170)
T ss_pred -c-cccccCCEEEEEcccccCC--CceEEEE
Confidence 0 1122356888999999985 6789985
No 260
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.68 E-value=3.4e-14 Score=129.38 Aligned_cols=309 Identities=14% Similarity=0.115 Sum_probs=195.1
Q ss_pred chHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhC-CCCEE
Q 012238 102 VLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF-PGAKV 180 (467)
Q Consensus 102 ~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~-~gd~V 180 (467)
+...+++++.++.... .-|+......+|.+..|+.... +.-+++ .+||.+..++ ++..+. +|..|
T Consensus 34 PTdeMr~am~eA~vgD--dVyGeD~tt~rLE~~vA~l~GK-------EAgLFv---~SGTmgNlla--Im~Hc~~rg~ei 99 (384)
T KOG1368|consen 34 PTDEMRRAMAEASVGD--DVYGEDPTTNRLEQRVAELFGK-------EAGLFV---PSGTMGNLLA--IMVHCHQRGSEI 99 (384)
T ss_pred ChHHHHHHHhhcccCc--ccccCCccHHHHHHHHHHHhCc-------cceeee---cccccccHHH--HHHHhcCCCceE
Confidence 3688888888876443 4465556677999999999543 344555 5555556565 565666 89999
Q ss_pred EEcCCCCc-chHH--HHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcC-----CCCcEEEEeCCCCCCCC-CCCCHHHH
Q 012238 181 LISSPTWG-NHKN--IFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA-----PGGSFILLHGCAHNPTG-IDPTPEQW 251 (467)
Q Consensus 181 lv~~P~y~-~~~~--~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~-----~~~~~~i~i~~p~NPTG-~~~~~~~l 251 (467)
++-+-++- .|.. +....|+.+.++.. ++++.+|+++++..+... .+.+++|++-|-||-+| .++|.|++
T Consensus 100 i~gd~~HI~~~E~gg~s~l~gv~~~tv~~--e~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~ 177 (384)
T KOG1368|consen 100 IVGDRAHIHRYEQGGISQLAGVHVRTVKN--ENDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEEL 177 (384)
T ss_pred EeccchheeehhccChhhhccceeEeeee--CCCCeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHH
Confidence 99886653 3332 34456666666654 667789999999999842 35788898888777776 99999999
Q ss_pred HHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecCCHHHHhhhhh
Q 012238 252 EKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARCCE 331 (467)
Q Consensus 252 ~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~ 331 (467)
.++.++|+++|+.+..|.+-.+-+.-. ...++..+....+.+=+ =|||.+|.| +|-++ .++++++++
T Consensus 178 ~~v~~lak~~glkLH~DGARi~NAava---sgV~vk~i~~~fDSVsi--CLSKglgAP---VGSVi--VG~k~FI~k--- 244 (384)
T KOG1368|consen 178 DRVKALAKRHGLKLHMDGARIFNAAVA---SGVPVKKICSAFDSVSI--CLSKGLGAP---VGSVI--VGSKDFIDK--- 244 (384)
T ss_pred HHHHHHHhccCCeeecchhhhhhHHHH---cCCCHHHHHHhhhhhhh--hhhccCCCC---cccEE--EccHHHHHH---
Confidence 999999999999999999843222110 11133344333333222 278999877 89986 699999987
Q ss_pred hhHHHHHHHHHhhccCccCCCc--hHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccccc
Q 012238 332 VAVIQVKSQLKRLARPMYSNPP--VHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFIL 409 (467)
Q Consensus 332 ~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~ 409 (467)
.+........+.- .+..+++..+|++. |. .+..-. ++...+.+.+. ..+ .+++..
T Consensus 245 ---------A~~~RKalGGGmRQsGvLaaaaLval~~~-----~~-~L~~dH----k~A~~lAe~~~-~~~---~i~v~v 301 (384)
T KOG1368|consen 245 ---------ARHFRKALGGGMRQSGVLAAAALVALDEN-----VP-LLRADH----KRAKELAEYIN-TPE---EIRVEV 301 (384)
T ss_pred ---------HHHHHHHhcCchhHHHHHHHHHHHHhhcc-----hH-HHHHHH----HHHHHHHHHhc-ccc---ceeeec
Confidence 3222222222222 22223333333321 11 122222 23344555555 443 133333
Q ss_pred C--CcceEEe-----cCCCHHHHHHHHHcccEEEeCCC----eEEecc-CChhhHHHHHHHHHHHH
Q 012238 410 R--QIGMFSF-----TGLNKAQSDNMTNKWHVYMTKDG----RISLAG-LSLAKCEYLADAIIDSY 463 (467)
Q Consensus 410 ~--~~g~f~~-----~~l~~~~~~~ll~~~gI~v~~gg----Ris~~~-~~~~~i~~~~~~l~~~l 463 (467)
+ +.+ ++. .+++.+.+.+.++++||.+..+. ||.|.. +++++++++...+.+.+
T Consensus 302 ~a~etN-iv~~~l~q~~~~~~~l~~~~~k~gi~lm~~~s~r~Rivlh~Qvt~~~ve~~~~~~~k~~ 366 (384)
T KOG1368|consen 302 PAVETN-IVNMVLCQARLTAEELCKFLEKNGILLMGGASRRIRIVLHHQVTDEDVEYVKSVLSKKF 366 (384)
T ss_pred chhhcc-eeeeecccccCCHHHHHHHHHHCCeEEeeccccceEEEEEEecCHHHHHHHHHHHHHHH
Confidence 3 444 433 35677776666677899998874 777653 58899999999995443
No 261
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.67 E-value=4.6e-14 Score=139.95 Aligned_cols=215 Identities=19% Similarity=0.221 Sum_probs=144.6
Q ss_pred CcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHh----hCCCC
Q 012238 125 IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN----DARVP 200 (467)
Q Consensus 125 ~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~----~~G~~ 200 (467)
.+....+.+.++++..+ +.+++ +++|+.|+..+ +++.+.+||+|+++...|......++ ..|++
T Consensus 54 nPt~~~le~~la~Le~g--------~~a~~--~~SGmaAi~~~--l~~ll~~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~ 121 (386)
T PF01053_consen 54 NPTVRALEQRLAALEGG--------EDALL--FSSGMAAISAA--LLALLKPGDHIVASDDLYGGTYRLLEELLPRFGVE 121 (386)
T ss_dssp -HHHHHHHHHHHHHHT---------SEEEE--ESSHHHHHHHH--HHHHS-TTBEEEEESSSSHHHHHHHHHCHHHTTSE
T ss_pred cccHHHHHHHHHHhhcc--------cceee--ccchHHHHHHH--HHhhcccCCceEecCCccCcchhhhhhhhcccCcE
Confidence 34467788888888543 35666 79999999887 67778899999999999987766554 46888
Q ss_pred eEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcC-CeeEEeccCCCCCCCCC
Q 012238 201 WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKN-HIPFFDVAYQGFASGSL 279 (467)
Q Consensus 201 ~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~-~~li~Deay~~~~~~~~ 279 (467)
+..++. -|++.++++++ +++++|++-+|.||+..+.+ +++|+++|+++| +++|+|..+.....-
T Consensus 122 v~~~d~-------~d~~~l~~~l~---~~t~~v~~EspsNP~l~v~D---l~~i~~~a~~~g~~~~vVDnT~atp~~~-- 186 (386)
T PF01053_consen 122 VTFVDP-------TDLEALEAALR---PNTKLVFLESPSNPTLEVPD---LEAIAKLAKEHGDILVVVDNTFATPYNQ-- 186 (386)
T ss_dssp EEEEST-------TSHHHHHHHHC---TTEEEEEEESSBTTTTB------HHHHHHHHHHTTT-EEEEECTTTHTTTC--
T ss_pred EEEeCc-------hhHHHHHhhcc---ccceEEEEEcCCCccccccc---HHHHHHHHHHhCCceEEeeccccceeee--
Confidence 777643 58899999998 68999999999999977655 557888899998 999999997654321
Q ss_pred CCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecCC-HHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHH
Q 012238 280 DNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS-SDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGAR 358 (467)
Q Consensus 280 ~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 358 (467)
++ + +.+ -.|++.|.+|.++-.|--+|.+++ +.+ +++.+. ++..........++....
T Consensus 187 --~p--L----~~G-aDivv~S~TKyl~Ghsdv~~G~vv-~~~~~~~~~~------------l~~~~~~~G~~~~p~da~ 244 (386)
T PF01053_consen 187 --NP--L----ELG-ADIVVHSATKYLSGHSDVMGGAVV-VNGSSELYDR------------LREFRRLLGATLSPFDAW 244 (386)
T ss_dssp ---G--G----GGT--SEEEEETTTTTTTSSSE-EEEEE-ESSHHHHHHH------------HHHHHHHHT-B--HHHHH
T ss_pred --cc--C----cCC-ceEEEeeccccccCCcceeeEEEE-ECchhhhhhh------------hcchhhhcCccchHHHHH
Confidence 11 1 122 358899999999766655666553 344 566666 443333333345555544
Q ss_pred HHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 012238 359 IVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD 399 (467)
Q Consensus 359 ~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~ 399 (467)
.+..-|.. +..+.++..++...+.+.|+ ..
T Consensus 245 ll~rgl~T----------l~~R~~~~~~nA~~lA~~L~-~h 274 (386)
T PF01053_consen 245 LLLRGLRT----------LPLRMERQNENAEALAEFLE-EH 274 (386)
T ss_dssp HHHHHHTT----------HHHHHHHHHHHHHHHHHHHH-TS
T ss_pred HHhcCCCc----------HHHHHHHHHHHHHHHHHHHH-hC
Confidence 44444433 34455666667777888887 54
No 262
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.67 E-value=3e-14 Score=143.16 Aligned_cols=327 Identities=15% Similarity=0.103 Sum_probs=191.8
Q ss_pred CcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcC------CCCcchHHHHHHHHHHHhCCCCcccccCceeeeec
Q 012238 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEY------LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQG 157 (467)
Q Consensus 84 ~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y------~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t 157 (467)
+.|+|-..++ ++++.+++++...+...+..+| .....+.++.....+.....++. + .+-||.
T Consensus 50 ~~l~LiasEN-------~~s~~v~~a~~s~l~nkyaeg~pg~ryy~g~~~~d~ie~l~~~ra~~lf~a----~-~anvqp 117 (493)
T PRK13580 50 SSLKLIASEN-------YSSLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDTVEWEAAEHAKELFGA----E-HAYVQP 117 (493)
T ss_pred cCceEecccc-------cCCHHHHHHhcccccccCcCCCCCccccCCCchHHHHHHHHHHHHHHHhCC----C-cccccC
Confidence 6788887665 2378899998887754433333 23344445544433333322221 1 133456
Q ss_pred CCchhHHHHHHHHHHHhCC-------------------------------CCEEEEcCCCCcchHHH---HhhCC--CCe
Q 012238 158 LSGTGSLRLAAALIERYFP-------------------------------GAKVLISSPTWGNHKNI---FNDAR--VPW 201 (467)
Q Consensus 158 ~ggt~al~l~~~~l~~~~~-------------------------------gd~Vlv~~P~y~~~~~~---~~~~G--~~~ 201 (467)
.+|+.|...+ +.+.+.| ||+|+..++..+.+... ....| .+.
T Consensus 118 ~Sg~~An~~v--~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg~~~n~~~~~~~~ 195 (493)
T PRK13580 118 HSGADANLVA--FWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHGFRPNISGKMFHQ 195 (493)
T ss_pred CCcHHHHHHH--HHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecCcccchhhheeee
Confidence 8888888887 5556655 89999998766544221 11122 456
Q ss_pred EEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCC
Q 012238 202 SEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDN 281 (467)
Q Consensus 202 ~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~ 281 (467)
+.++++ ++++.+|++.+++.+++ .+..++++...|=++ ..+ +++|.++|+++|.++++|+++.--..+.
T Consensus 196 ~~y~vd-~~~g~iD~d~l~~~~~~---~~plvii~g~S~~~~-~~d---l~~i~eia~~~gA~L~VD~AH~~Gligg--- 264 (493)
T PRK13580 196 RSYGVD-PDTGLLDYDEIAALARE---FKPLILVAGYSAYPR-RVN---FAKLREIADEVGAVLMVDMAHFAGLVAG--- 264 (493)
T ss_pred EecccC-cccCccCHHHHHHHHhh---cCCEEEEeCccccCC-CcC---HHHHHHHHHHcCCEEEEECchhhceecc---
Confidence 666664 44677999999999984 333444455555544 555 5567777999999999999954322221
Q ss_pred ChhHHHHHHhcCCeEEEEecCccCc-ccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHH
Q 012238 282 DASSVRLFATRGMELLVAQSYSKNL-GLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIV 360 (467)
Q Consensus 282 ~~~~~~~~~~~~~~~i~~~S~SK~~-~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 360 (467)
+...- .+.....-.++++|++|++ |.. .|++. .++++++. +.......++++......++
T Consensus 265 ~~~~~-~~~~~~~~D~vtgT~hKaL~GP~---GG~I~---~~~~l~~~------------L~~a~P~i~gg~l~p~iAA~ 325 (493)
T PRK13580 265 KVFTG-DEDPVPHADIVTTTTHKTLRGPR---GGLVL---AKKEYADA------------VDKGCPLVLGGPLPHVMAAK 325 (493)
T ss_pred ccchh-hcCCCCCCcEEEeCChhhccCCC---eEEEE---ecHHHHHH------------HhhCCCcccCCCccHHHHHH
Confidence 11000 0000112358899999988 433 37774 66777776 54333333444333322222
Q ss_pred HHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccccc--CCcceEEecCC-----CHHHHHHHHHccc
Q 012238 361 ANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFIL--RQIGMFSFTGL-----NKAQSDNMTNKWH 433 (467)
Q Consensus 361 ~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~--~~~g~f~~~~l-----~~~~~~~ll~~~g 433 (467)
+..+. .+. ..+..+.++++.++.+.|.+.|. +.|+ ++.. .+.. .+++.+ +...+.+.|++.|
T Consensus 326 avAl~--e~~---~~ef~~y~~~l~~Na~~La~~L~-~~G~----~vv~ggTdsh-IV~V~lg~~~~~g~~a~~~L~e~G 394 (493)
T PRK13580 326 AVALA--EAR---TPEFQKYAQQVVDNARALAEGFL-KRGA----RLVTGGTDNH-LVLIDVTSFGLTGRQAESALLDAG 394 (493)
T ss_pred HHHHH--HHh---CccHHHHHHHHHHHHHHHHHHHH-hcCC----CccCCCCCCC-EEEEEeCCHHHHHHHHHHHHHHCC
Confidence 22221 110 11124577888899999999999 8884 4432 2222 233333 2335666777789
Q ss_pred EEEeCC-------------C-eEEec-----cCChhhHHHHHHHHHHHHHh
Q 012238 434 VYMTKD-------------G-RISLA-----GLSLAKCEYLADAIIDSYHN 465 (467)
Q Consensus 434 I~v~~g-------------g-Ris~~-----~~~~~~i~~~~~~l~~~l~~ 465 (467)
|.+.+. | ||+.. ++++++++++++.|.++++.
T Consensus 395 I~vn~i~~Ptvp~g~~~~srLRIg~~A~ttrg~teedi~~iad~l~~~l~~ 445 (493)
T PRK13580 395 IVTNRNSIPSDPNGAWYTSGIRLGTPALTTLGMGSDEMDEVAELIVKVLSN 445 (493)
T ss_pred eEEccccCCCCCCCCCCCceEEeccchhhhcCCCHHHHHHHHHHHHHHHHh
Confidence 998631 2 77654 33579999999999988764
No 263
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.67 E-value=6e-14 Score=141.76 Aligned_cols=157 Identities=17% Similarity=0.113 Sum_probs=116.3
Q ss_pred cchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHH----HhhCCCCe
Q 012238 126 EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI----FNDARVPW 201 (467)
Q Consensus 126 ~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~----~~~~G~~~ 201 (467)
.....|++.+|++.... ..++ +++|+.|+.++ +...+.+||+|+++...|...... +...|+++
T Consensus 69 p~~~~Le~~lA~l~g~~--------~av~--~sSG~aAi~~a--l~all~~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v 136 (436)
T PRK07812 69 PTQDVVEQRIAALEGGV--------AALL--LASGQAAETFA--ILNLAGAGDHIVSSPRLYGGTYNLFHYTLPKLGIEV 136 (436)
T ss_pred chHHHHHHHHHHHhCCC--------eEEE--EccHHHHHHHH--HHHHhCCCCEEEEeCCcchHHHHHHHHHhhcCeEEE
Confidence 34678999999986442 3455 68999999887 566678999999999888765433 34577777
Q ss_pred EEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCC
Q 012238 202 SEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDN 281 (467)
Q Consensus 202 ~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~ 281 (467)
+.++. . .|++.+++.++ +++++|++.+|+||+|.+.+.+ +|+++|+++|+++|+|+++......
T Consensus 137 ~~vdd--~----~d~e~l~~ai~---~~tklV~ie~~sNp~G~v~Dl~---~I~~la~~~gi~liVD~t~a~~~~~---- 200 (436)
T PRK07812 137 SFVED--P----DDLDAWRAAVR---PNTKAFFAETISNPQIDVLDIP---GVAEVAHEAGVPLIVDNTIATPYLI---- 200 (436)
T ss_pred EEECC--C----CCHHHHHHhCC---CCCeEEEEECCCCCCCeecCHH---HHHHHHHHcCCEEEEECCCcccccC----
Confidence 76641 1 38899988887 5788999999999999998866 6666799999999999985432111
Q ss_pred ChhHHHHHHhcCCeEEEEecCccCcccCCCccceEE
Q 012238 282 DASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMN 317 (467)
Q Consensus 282 ~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~ 317 (467)
. ++ +.+ -.+++.|++|.++..|--+|+++
T Consensus 201 ~--pl----~~G-aDivv~S~tK~lgg~G~~i~G~v 229 (436)
T PRK07812 201 R--PL----EHG-ADIVVHSATKYLGGHGTAIAGVI 229 (436)
T ss_pred C--ch----hcC-CCEEEEecccccCCCCCeEEEEE
Confidence 1 11 222 34667999999998887788876
No 264
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.66 E-value=4.9e-13 Score=136.30 Aligned_cols=340 Identities=12% Similarity=0.036 Sum_probs=186.6
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCC-CC-cCCCCcchHHHHHHHHHHHhCCCCcccccCc-eeeeecC
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-NK-EYLPIEGLAAFNKVTAELLFGADNSVLKEQR-VATVQGL 158 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~-~~-~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~-i~~~~t~ 158 (467)
+.+.||+..|..-..-|. -.|.|.+++.+.+.... .+ .|.+.....+|-+.+++..-.. ....+ +++ ++
T Consensus 38 G~~ylD~~~g~~~~~lGh--~~p~i~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~----~~~~~~~f~--~~ 109 (442)
T TIGR00709 38 GKEYLDFLAGAGTLALGH--NHPNMKQKILDYLQSGLPLHTLDLTTPLKDAFIEALLNIIPKR----KMDYKLQFP--GP 109 (442)
T ss_pred CCEEEEccccHhhhcCCC--CCHHHHHHHHHHHHhccCccccccCcHHHHHHHHHHHHhCCCc----CCCccEEEe--CC
Confidence 457899988854222233 36788888888775422 11 1223322333444444432110 00123 444 68
Q ss_pred CchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhh-CC-------C-----CeEEeeeecCCCCCC--------Ch-
Q 012238 159 SGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFND-AR-------V-----PWSEYRYYDPKTVGL--------DF- 216 (467)
Q Consensus 159 ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~-~G-------~-----~~~~v~~~~~~~~~~--------d~- 216 (467)
+|++|.+.+.++........+|+...-+|......... .| . .+..++.. ..... +.
T Consensus 110 sGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 187 (442)
T TIGR00709 110 SGADAVEAAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYP--HEYRCPFGIGGEAGSN 187 (442)
T ss_pred CHHHHHHHHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCC--ccccccccCCchhHHH
Confidence 99999999866654444346899889888766543332 22 0 12223321 11111 11
Q ss_pred ---hhHHHHHHc---C-CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHH
Q 012238 217 ---EGMIADIKA---A-PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF 289 (467)
Q Consensus 217 ---~~l~~~l~~---~-~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~ 289 (467)
+.+++.+.. . .+...+++-+.++|+....++.+.+++|.++|++||+++|.||++.+|...+ ..+....+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG---~~~a~~~~ 264 (442)
T TIGR00709 188 ASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSG---TMFAFEHA 264 (442)
T ss_pred HHHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCC---chhHHHHc
Confidence 123333321 1 1334455555455555556899999999999999999999999999986432 22332222
Q ss_pred HhcCCeEEEEecCccCcccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhh
Q 012238 290 ATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPAL 369 (467)
Q Consensus 290 ~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~ 369 (467)
.-.+++++ ++|.++. |+++|+++ .+++ ++. +.......+.+.+.+++.++...|+. +
T Consensus 265 -gv~PDiv~---~gK~l~~-G~Pigav~---~~~~-~~~------------~~~~~~~~T~~gnpla~aaa~a~L~~--i 321 (442)
T TIGR00709 265 -GIEPDFVV---MSKAVGG-GLPLAVLL---IAPE-FDA------------WQPAGHTGTFRGNQLAMVTGTEALNY--W 321 (442)
T ss_pred -CCCCcEEE---EcccccC-CcccEEEE---EchH-Hhc------------cCCCcCCCCCCcCHHHHHHHHHHHHH--H
Confidence 22334444 7999995 99999996 5555 344 22111123445667777777776632 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcc--CCCCCcccccCCcceEEe-c-CC------------C---HH-HHHHHH
Q 012238 370 FDEWKAEMEMMAGRIKNVRQKLFDSLSAKD--KSGKDWSFILRQIGMFSF-T-GL------------N---KA-QSDNMT 429 (467)
Q Consensus 370 ~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~--g~~~~~~~~~~~~g~f~~-~-~l------------~---~~-~~~~ll 429 (467)
.+ +...++++++.+++.+.|+ ++ ..|. +..+...|.++.. + +- + .. +...++
T Consensus 322 ~~------~~l~~~~~~~g~~l~~~L~-~l~~~~~~-v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (442)
T TIGR00709 322 KD------DNLAQNAQERGERITSFLD-DMIKEHPC-IGNVRGRGLMQGIMIVDERQSKDATGAYPRDCELAAAIQGACF 393 (442)
T ss_pred Hh------cCHHHHHHHHHHHHHHHHH-HHHHhCCC-eeeeeccceEEEEEEccCcccccccccCCcchHHHHHHHHHHH
Confidence 11 1334455566666666665 43 1111 1122334433311 1 10 0 11 233444
Q ss_pred HcccEEEeCC---C---eEEec-cCChhhHHHHHHHHHHHHHhc
Q 012238 430 NKWHVYMTKD---G---RISLA-GLSLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 430 ~~~gI~v~~g---g---Ris~~-~~~~~~i~~~~~~l~~~l~~~ 466 (467)
++||++.+. | ||... .+++++++++++++.+++.++
T Consensus 394 -~~Gvl~~~~~~~~~~l~~~Ppl~it~~ei~~~~~~l~~~l~~~ 436 (442)
T TIGR00709 394 -ENGLLLETGGREGEVFRLLCPITIDQEECEEGISRFKQAVEEA 436 (442)
T ss_pred -HCCeEEeecCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 469998765 3 66544 248899999999999988653
No 265
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.65 E-value=1.1e-13 Score=137.61 Aligned_cols=211 Identities=12% Similarity=0.045 Sum_probs=143.4
Q ss_pred CcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHH----HhhCCCC
Q 012238 125 IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI----FNDARVP 200 (467)
Q Consensus 125 ~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~----~~~~G~~ 200 (467)
.+....|.+.+|++-.+ +..++ +++|+.|+..+ ++..+.+||+|+++...|.+.... ++..|++
T Consensus 61 nPt~~~le~~la~LEg~--------~~a~~--~~SGmaAi~~~--~~~ll~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~ 128 (395)
T PRK08114 61 TLTHFSLQEAMCELEGG--------AGCAL--YPCGAAAVANA--ILAFVEQGDHVLMTGTAYEPTQDFCSKILSKLGVT 128 (395)
T ss_pred ChhHHHHHHHHHHHhCC--------CeEEE--EhHHHHHHHHH--HHHHcCCCCEEEEeCCCcHHHHHHHHHHHHhcCcE
Confidence 34566788888887332 35555 68899999987 566688999999999888766554 4668988
Q ss_pred eEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhc--CCeeEEeccCCCCCCCC
Q 012238 201 WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEK--NHIPFFDVAYQGFASGS 278 (467)
Q Consensus 201 ~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~--~~~li~Deay~~~~~~~ 278 (467)
+..++. .|.+.+++.++ +++++|++.+|.||||.+.+.+ +|+++|+++ |+++++|.++..-..
T Consensus 129 v~~vd~-------~d~~~l~~~l~---~~TrlV~~EtpsNp~~~v~DI~---~Ia~ia~~~g~g~~lvVDnT~a~p~~-- 193 (395)
T PRK08114 129 TTWFDP-------LIGADIAKLIQ---PNTKVVFLESPGSITMEVHDVP---AIVAAVRSVNPDAVIMIDNTWAAGVL-- 193 (395)
T ss_pred EEEECC-------CCHHHHHHhcC---CCceEEEEECCCCCCCEeecHH---HHHHHHHHhCCCCEEEEECCCccccc--
Confidence 888764 46788999887 5789999999999999988755 777779997 499999999653221
Q ss_pred CCCChhHHHHHHhcCCeEEEEecCccCcccCC-CccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHH
Q 012238 279 LDNDASSVRLFATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGA 357 (467)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 357 (467)
.++ . +. .-.+++.|.+|.++-+| .-.|.+ +.+++..+. ++..........++...
T Consensus 194 --~~p--l----~~-GaDivv~S~tKyl~Ghsdv~~G~v---~~~~~~~~~------------l~~~~~~~G~~~~p~~a 249 (395)
T PRK08114 194 --FKA--L----DF-GIDISIQAGTKYLVGHSDAMIGTA---VANARCWEQ------------LRENSYLMGQMVDADTA 249 (395)
T ss_pred --cCH--H----Hc-CCcEEEEcCcccccCCCcceeEEE---EcCHHHHHH------------HHHHHHhccCCCCHHHH
Confidence 111 1 11 24588999999887676 444533 356655554 33222223345555554
Q ss_pred HHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 012238 358 RIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLS 396 (467)
Q Consensus 358 ~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~ 396 (467)
+.+..-|+. +.-+.++..++...+.+.|+
T Consensus 250 ~l~~rgl~T----------L~lR~~~~~~na~~va~~L~ 278 (395)
T PRK08114 250 YMTSRGLRT----------LGVRLRQHEESSLKVAEWLA 278 (395)
T ss_pred HHHHcCCCc----------HHHHHHHHHHHHHHHHHHHH
Confidence 544333333 33455556666677777776
No 266
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.64 E-value=1.8e-13 Score=130.17 Aligned_cols=324 Identities=19% Similarity=0.247 Sum_probs=211.5
Q ss_pred CcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCC------CCcchH---HHHHHHHHHHhCCCCcccccCceee
Q 012238 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYL------PIEGLA---AFNKVTAELLFGADNSVLKEQRVAT 154 (467)
Q Consensus 84 ~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~------~~~G~~---~lr~aia~~l~~~~~~~~~~~~i~~ 154 (467)
+.|+|=..++ ++++.|+++....+.+.+..+|+ ...-.+ .+-...++.|++.. .+-
T Consensus 27 ~~ieLIASEN-------~~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~LFga~--------~an 91 (413)
T COG0112 27 EHIELIASEN-------FTSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLFGAE--------YAN 91 (413)
T ss_pred hceeeeeccc-------cCCHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHHhCCC--------ccc
Confidence 6788887655 24889999998888554444442 222233 33334444444432 222
Q ss_pred eecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHH---HhhCCC--CeEEeeeecCCCCCCChhhHHHHHHcCCCC
Q 012238 155 VQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI---FNDARV--PWSEYRYYDPKTVGLDFEGMIADIKAAPGG 229 (467)
Q Consensus 155 ~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~---~~~~G~--~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 229 (467)
||..+|++|...+ +++++.|||+|+-.+-...+|..- +...|. +.+.|+++ .++..+|.|++++...+ .+
T Consensus 92 VQPhSGs~AN~av--~~All~pGDtimgm~l~~GGHltHg~~v~~sG~~~~~v~Y~vd-~et~~IDyD~~~k~a~e--~k 166 (413)
T COG0112 92 VQPHSGSQANQAV--YLALLQPGDTIMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGVD-PETGLIDYDEVEKLAKE--VK 166 (413)
T ss_pred cCCCCchHHHHHH--HHHHcCCCCeEecccCCCCCcccCCCCCCccceeEEeEecccc-cccCccCHHHHHHHHHH--hC
Confidence 4568888888887 778899999999998766655332 222333 55666664 45788999999999987 56
Q ss_pred cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCC-CCCCCCCCCChhHHHHHHhcCCeEEEEecCccCccc
Q 012238 230 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ-GFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGL 308 (467)
Q Consensus 230 ~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~ 308 (467)
+++|+......|- .-+++++.++|.+.|.++++|.++. ++..++.-.+ ++ ..-.++..|-+|+|
T Consensus 167 PK~ii~G~SaY~r-----~id~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~--P~------~~AdvVTtTTHKTl-- 231 (413)
T COG0112 167 PKLIIAGGSAYSR-----PIDFKRFREIADEVGAYLMVDMAHVAGLIAGGVHPN--PL------PHADVVTTTTHKTL-- 231 (413)
T ss_pred CCEEEECcccccc-----ccCHHHHHHHHHHhCceEEehHHHHHHHHhcccCCC--CC------CccceEeCCcccCC--
Confidence 6788866544443 2357788888999999999999953 4444432111 11 12458899999997
Q ss_pred CCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHH
Q 012238 309 YAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVR 388 (467)
Q Consensus 309 ~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r 388 (467)
+|-|-|.|. +.++++.+. +.+...+...+.|.....++..+ .+.+..+.+.++..++..++.
T Consensus 232 rGPrGG~Il--~~~eel~kk------------in~aVFPg~qggpl~HviAakaV----a~~Eal~p~fk~Ya~qVv~NA 293 (413)
T COG0112 232 RGPRGGIIL--TNDEELAKK------------INSAVFPGLQGGPLMHVIAAKAV----AFKEALEPEFKEYAKQVVKNA 293 (413)
T ss_pred CCCCceEEE--eccHHHHHH------------hhhhcCCccCCChHHHHHHHHHH----HHHHHcChhHHHHHHHHHHHH
Confidence 677878875 556677776 77666665554443332222221 222222333567778888889
Q ss_pred HHHHHHhhhccCCCCCcccccCCcceEEec------CCCHHHHHHHHHcccEEEeCC-------------C-eEEec---
Q 012238 389 QKLFDSLSAKDKSGKDWSFILRQIGMFSFT------GLNKAQSDNMTNKWHVYMTKD-------------G-RISLA--- 445 (467)
Q Consensus 389 ~~l~~~l~~~~g~~~~~~~~~~~~g~f~~~------~l~~~~~~~ll~~~gI~v~~g-------------g-Ris~~--- 445 (467)
+.|.+.|. +.| ++++....-.++++ +++.+.++.+|++.||.+... | ||...
T Consensus 294 kaLAe~l~-~~G----~~vvsGgTdnHl~lVDl~~~~~~Gk~ae~~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~T 368 (413)
T COG0112 294 KALAEALK-ERG----FKVVSGGTDNHLVLVDLRSKGLTGKKAEAALERAGITVNKNAIPFDPESPFVTSGIRIGTPAVT 368 (413)
T ss_pred HHHHHHHH-HcC----CeEecCCccceEEEEEcccCCCCHHHHHHHHHHcCEeeccCCCCCCCCCCCCCccceeccHHHh
Confidence 99999998 887 46665433334433 346788999999999988664 3 77532
Q ss_pred --cCChhhHHHHHHHHHHHHHh
Q 012238 446 --GLSLAKCEYLADAIIDSYHN 465 (467)
Q Consensus 446 --~~~~~~i~~~~~~l~~~l~~ 465 (467)
++.+++++++.+.|.++++.
T Consensus 369 trG~~e~e~~~Ia~~I~~vl~~ 390 (413)
T COG0112 369 TRGFGEAEMEEIADLIADVLDG 390 (413)
T ss_pred hcCCCHHHHHHHHHHHHHHHhc
Confidence 34678999999999998875
No 267
>PRK02769 histidine decarboxylase; Provisional
Probab=99.64 E-value=1.7e-13 Score=136.31 Aligned_cols=292 Identities=15% Similarity=0.111 Sum_probs=182.8
Q ss_pred HHHHHHHHHHHhCCCCcccccCce--eeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeee
Q 012238 129 AAFNKVTAELLFGADNSVLKEQRV--ATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRY 206 (467)
Q Consensus 129 ~~lr~aia~~l~~~~~~~~~~~~i--~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~ 206 (467)
.+.++.++++++.. ++++ ++ |+|||++...+......+.++++|+++.-.+......++.+|.+...++.
T Consensus 68 ~~~~~~~a~l~g~~------~~~~~G~~--TsGgTean~~a~~~ar~~~~~~~ii~s~~~H~Sv~ka~~~lg~~~~~V~~ 139 (380)
T PRK02769 68 RDVMNFFAELFKIP------FNESWGYI--TNGGTEGNLYGCYLARELFPDGTLYYSKDTHYSVSKIARLLRIKSRVITS 139 (380)
T ss_pred HHHHHHHHHHhCCC------CCCCCEEE--ecChHHHHHHHHHHHHHhCCCcEEEeCCCceehHHHHHHHcCCCCceecc
Confidence 45666667776543 3343 55 89999997765222222457899999999999999999999999999988
Q ss_pred ecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcC---CeeEEeccCCCCCCCCCCCCh
Q 012238 207 YDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKN---HIPFFDVAYQGFASGSLDNDA 283 (467)
Q Consensus 207 ~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~---~~li~Deay~~~~~~~~~~~~ 283 (467)
. .++.+|++.|++.+++...++.+++.+.++|+||.+-+.+ +|+++|+++| +++++|.++.++...-.+ ..
T Consensus 140 ~--~~g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~idpi~---~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~-~~ 213 (380)
T PRK02769 140 L--PNGEIDYDDLISKIKENKNQPPIIFANIGTTMTGAIDNIK---EIQEILKKIGIDDYYIHADAALSGMILPFVN-NP 213 (380)
T ss_pred C--CCCcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCcccCCHH---HHHHHHHHhCCCceEEEEEecccceeecccC-cc
Confidence 4 3667999999999986444588999999999999988866 5666699998 699999998775432100 00
Q ss_pred hHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecCCHHHHhhhhhhhHHHHHHH---HHhhccCccCCCc---hHHH
Q 012238 284 SSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQ---LKRLARPMYSNPP---VHGA 357 (467)
Q Consensus 284 ~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~---l~~~~~~~~~~~~---~~~~ 357 (467)
..+ .+ .. .-..+..|.+|.++.| ..+|.++ ..+ +..+. +... +.........+.+ .+..
T Consensus 214 ~~~-d~-~~-~vDsis~s~HK~~~~P-~g~G~l~--~r~-~~~~~--------~~~~~~yl~~~d~t~~GSR~g~~~l~l 278 (380)
T PRK02769 214 PPF-SF-AD-GIDSIAISGHKFIGSP-MPCGIVL--AKK-KYVER--------ISVDVDYIGSRDQTISGSRNGHTALLL 278 (380)
T ss_pred ccC-Cc-cC-CCCEEEECCcccCCCC-CCcEEEE--Eeh-hhhhh--------cccCccccCCCCCCccCCCCcHHHHHH
Confidence 011 11 11 2345678889988733 4468775 243 33333 1000 0000000011122 2222
Q ss_pred HHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceEEecCCCHHHHHHHHHcccEEEe
Q 012238 358 RIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMT 437 (467)
Q Consensus 358 ~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~~~g~f~~~~l~~~~~~~ll~~~gI~v~ 437 (467)
.++...+. ...++++.++..+..+++.+.|+ +.|+ ..+..|.....+|...+.+. .+++.+...
T Consensus 279 w~aL~~lg--------~~G~~~~~~~~~~la~~l~~~L~-~~g~---~~~~~p~~~~v~f~~~~~~~----~~~w~l~~~ 342 (380)
T PRK02769 279 WAAIRSLG--------SKGLRQRVQHCLDMAQYAVDRLQ-ANGI---PAWRNPNSITVVFPCPSERI----WKKWHLATS 342 (380)
T ss_pred HHHHHHHC--------HHHHHHHHHHHHHHHHHHHHHHH-hCCC---EEEcCCCceEEEEcCCCHHH----HhCeeEccc
Confidence 22222222 23466777888888899999998 7764 22344555544444334332 255556555
Q ss_pred CCC-eEEecc-CChhhHHHHHHHHHHHHHh
Q 012238 438 KDG-RISLAG-LSLAKCEYLADAIIDSYHN 465 (467)
Q Consensus 438 ~gg-Ris~~~-~~~~~i~~~~~~l~~~l~~ 465 (467)
++. ||.+.. .+.+.++.+++.|.+.+..
T Consensus 343 ~~~~hi~~~~~~~~~~~~~f~~dl~~~~~~ 372 (380)
T PRK02769 343 GNQAHIITMPHHNKQQIDSLIDELIFDLKN 372 (380)
T ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHHHhc
Confidence 444 777654 3667889999888877653
No 268
>PLN02271 serine hydroxymethyltransferase
Probab=99.64 E-value=4.3e-13 Score=135.41 Aligned_cols=340 Identities=16% Similarity=0.158 Sum_probs=200.2
Q ss_pred CcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCC------CCcchHHHHHHHHHHHhCCCCcccccCce-eeee
Q 012238 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYL------PIEGLAAFNKVTAELLFGADNSVLKEQRV-ATVQ 156 (467)
Q Consensus 84 ~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~------~~~G~~~lr~aia~~l~~~~~~~~~~~~i-~~~~ 156 (467)
+-|+|=..++ ++++.+++++...+.+.+..+|+ ....+.++.....+.....++.. ..+. +=||
T Consensus 149 ~~l~LIASEN-------~~S~av~~algS~ltnkYaEG~pG~Ryy~G~~~iD~iE~la~era~~lF~~~--~~~~gaNVQ 219 (586)
T PLN02271 149 KGIELIASEN-------FVCRAVMEALGSHLTNKYSEGMPGARYYTGNQYIDQIERLCCERALAAFGLD--SEKWGVNVQ 219 (586)
T ss_pred cCeeeccccc-------cCCHHHHHHhcCcccccCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHhCCc--cccccccee
Confidence 5688876654 23788999988877554444443 23334444333333322222211 1111 2245
Q ss_pred cCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHH---------HhhCCCCeEEeeee-cCCCCCCChhhHHHHHHcC
Q 012238 157 GLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI---------FNDARVPWSEYRYY-DPKTVGLDFEGMIADIKAA 226 (467)
Q Consensus 157 t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~---------~~~~G~~~~~v~~~-~~~~~~~d~~~l~~~l~~~ 226 (467)
..+|+.|...+ +.+++.|||+|+..+..++++... +...|..+..+++. +++++.+|.+++++....
T Consensus 220 p~SGs~AN~aV--~~ALl~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~~~g~IDyd~lek~a~~- 296 (586)
T PLN02271 220 PYSCTSANFAV--YTGLLLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQTGYIDYDKLEEKALD- 296 (586)
T ss_pred eccHHHHHHHH--HHHhcCCCCEEEEecCCCCCchhcccccccccccccccceEEEEEcccccccCccCHHHHHHHhhh-
Confidence 67899999888 667788999999999877766443 23456554555532 245678999999995543
Q ss_pred CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCC-CCCCCCCCCChhHHHHHHhcCCeEEEEecCccC
Q 012238 227 PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ-GFASGSLDNDASSVRLFATRGMELLVAQSYSKN 305 (467)
Q Consensus 227 ~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 305 (467)
.++++|++....|| ..++.+ ++.++|+++|+++++|.+.. ++...+. ...++ ..-.++..|.+|+
T Consensus 297 -~rPKLII~g~Sayp--r~~D~~---~i~eIAdevGA~LmvD~AH~aGLIa~g~--~~sP~------~~aDvvt~TTHKt 362 (586)
T PLN02271 297 -FRPKILICGGSSYP--REWDYA---RFRQIADKCGAVLMCDMAHISGLVAAKE--CVNPF------DYCDIVTSTTHKS 362 (586)
T ss_pred -cCCeEEEECchhcc--CcCCHH---HHHHHHHHcCCEEEEECcccccccccCc--CCCCC------cCCcEEEeCCccc
Confidence 67889998887888 445555 66667999999999999954 3332211 00011 1235889999999
Q ss_pred cccCCCccceEEEecCCHHHHhhh-----hhhh---HHHHHHHHHhhccCccCCCc-hHHHHHHHHHhCChhhHHHHHHH
Q 012238 306 LGLYAERIGAMNVVCSSSDLAARC-----CEVA---VIQVKSQLKRLARPMYSNPP-VHGARIVANVVGNPALFDEWKAE 376 (467)
Q Consensus 306 ~~~~G~RiG~~~~v~~~~~~~~~~-----~~~~---~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~L~~~~~~~~~~~~ 376 (467)
+ .|-|-|.+. +.+ +..... .|+. ..++...+.....+...+.+ .....+.+..+. +....+
T Consensus 363 L--rGPrGG~I~--~r~-~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGphn~~IAalAvalk-----ea~~~e 432 (586)
T PLN02271 363 L--RGPRGGIIF--YRK-GPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPHNNHIAALAIALK-----QVATPE 432 (586)
T ss_pred C--CCCCceEEE--ecc-cccccccCCccccccccccHHHHHHhhcccCCccccChhHHHHHHHHHHHH-----HHhChH
Confidence 8 344447665 332 110000 0000 00122225544444333332 222222222222 111122
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceE-EecC-----CCHHHHHHHHHcccEEEeC------------
Q 012238 377 MEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMF-SFTG-----LNKAQSDNMTNKWHVYMTK------------ 438 (467)
Q Consensus 377 l~~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~~~g~f-~~~~-----l~~~~~~~ll~~~gI~v~~------------ 438 (467)
..+..++..++.+.|.+.|. +.| ++++....-.+ ++++ ++...+++.|++.||.+..
T Consensus 433 fk~Ya~QVv~NAkaLA~~L~-~~G----~~vv~ggTdnHlvLvDl~~~g~~G~~ae~~Le~~~I~~Nkn~iP~d~~~~~p 507 (586)
T PLN02271 433 YKAYMQQVKKNAQALASALL-RRK----CRLVTGGTDNHLLLWDLTTLGLTGKNYEKVCEMCHITLNKTAIFGDNGTISP 507 (586)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HCC----CeEeeCCCCcceeeecCcccCCCHHHHHHHHHHcCeEeccccCCCCCCCCCC
Confidence 45677888888999999998 877 45554333334 4444 3678899999999998743
Q ss_pred CC-eEEec-----cCChhhHHHHHHHHHHHHH
Q 012238 439 DG-RISLA-----GLSLAKCEYLADAIIDSYH 464 (467)
Q Consensus 439 gg-Ris~~-----~~~~~~i~~~~~~l~~~l~ 464 (467)
+| ||... ++.+++++++.+.|.++++
T Consensus 508 sGiRiGT~alT~rG~~e~d~~~iA~~i~~~~~ 539 (586)
T PLN02271 508 GGVRIGTPAMTSRGCLESDFETIADFLLRAAQ 539 (586)
T ss_pred CcccccCHHHHhcCCCcHHHHHHHHHHHHHHh
Confidence 34 87632 3477899999888888875
No 269
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.64 E-value=4.9e-14 Score=139.93 Aligned_cols=313 Identities=14% Similarity=0.063 Sum_probs=181.3
Q ss_pred CCCchHHHHHHHHHHHhcC---CCCcCCCC-------cchHHHHHHHHHHHhCCCCcccccCceeeeecCC-chhHHHHH
Q 012238 99 QPYVLDVVKKAENLMLERG---ENKEYLPI-------EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS-GTGSLRLA 167 (467)
Q Consensus 99 ~p~~~~~v~~a~~~~~~~~---~~~~Y~~~-------~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g-gt~al~l~ 167 (467)
...+|+.|++++.+.+... ....|... .-..+.|+.++++++... +++|++ |.| +|++++.+
T Consensus 7 p~~~p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~-----~~~vvf--~~gs~T~a~~~~ 79 (355)
T cd00611 7 PAALPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPD-----NYKVLF--LQGGATGQFAAV 79 (355)
T ss_pred CCCCCHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCC-----CceEEE--EcCCchHHHHHH
Confidence 3345899999998876210 00112111 336788999999976422 567888 877 99999998
Q ss_pred HHHHHHhC---CCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCC-hhhHHHHHHcCCCCcEEEEeCCCCCCCC
Q 012238 168 AALIERYF---PGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLD-FEGMIADIKAAPGGSFILLHGCAHNPTG 243 (467)
Q Consensus 168 ~~~l~~~~---~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d-~~~l~~~l~~~~~~~~~i~i~~p~NPTG 243 (467)
+...+. +||.|++ .|....+..+++..|++++.++.++...+ .+ ++..+..+. +++++|.+++..|.||
T Consensus 80 --~~~l~~~~~~~~~i~~-g~~~~~~~~~a~~~g~~~~~~~~~~~g~~-~~~~~~~~~~~~---~~~~lV~~~h~~t~tG 152 (355)
T cd00611 80 --PLNLLGDKGTADYVVT-GAWSAKAAKEAKRYGGVVVIVAAKEEGKY-TKIPDVETWDLA---PDAAYVHYCSNETIHG 152 (355)
T ss_pred --HHhcCCCCCeEEEEEC-CHHHHHHHHHHHhcCCCcEEEecccccCC-CCCCCHhhcCCC---CCCCEEEEeCCccccc
Confidence 344454 4444433 33333445577889999999987322111 13 222222333 5778889999999999
Q ss_pred CCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecCCH
Q 012238 244 IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSS 323 (467)
Q Consensus 244 ~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~ 323 (467)
..++ + +++.+|+++++|.+ +.+..-.. +.. +. + +.+.|..|.+|++| +|.++ .++
T Consensus 153 ~~~~-----~---i~~~~g~~~~VDa~-qs~g~~~i--dv~------~~--~-~~~ss~~K~lGP~G--~g~l~---~~~ 207 (355)
T cd00611 153 VEFD-----E---VPDTGGVPLVADMS-SNILSRPI--DVS------KF--G-VIYAGAQKNLGPAG--VTVVI---VRK 207 (355)
T ss_pred EEcc-----e---ecccCCCeEEEEcc-ccccCCCC--CHH------Hh--C-EEEeecccccCCCc--eEEEE---ECH
Confidence 9743 2 34559999999999 55543322 211 11 2 35566789999888 57775 455
Q ss_pred HHHhhhhhhh---HHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHH-HHHHHHHHHHHHHHHHHHHhhhcc
Q 012238 324 DLAARCCEVA---VIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKA-EMEMMAGRIKNVRQKLFDSLSAKD 399 (467)
Q Consensus 324 ~~~~~~~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~-~l~~~~~~~~~~r~~l~~~l~~~~ 399 (467)
+..++ .++. +.+....... ......++.....++..+|+ +. .+. .++++.++.++..+++++.|+ ++
T Consensus 208 ~~~~~-~~~~~~~~~~~~~~~~~--~~~~~Tpn~~~i~~L~aal~---~l--~~~gg~e~i~~~~~~l~~~l~~~l~-~~ 278 (355)
T cd00611 208 DLLGK-ARKITPSMLNYKTHADN--NSLYNTPPTFAIYMMGLVLK---WL--KEQGGVEAMEKRNRQKAQLLYDTID-NS 278 (355)
T ss_pred HHHhh-cccCCCCcccHHHHHhc--CCCCCCChHHHHHHHHHHHH---HH--HHcCCHHHHHHHHHHHHHHHHHHHH-hC
Confidence 55554 1110 1111111111 11122344444344443332 11 122 377889999999999999999 87
Q ss_pred -CCCCCccccc--CCc-ceEEec--CC--CHHHHHHHHHcccEEEeCC----C--eEEeccC-ChhhHHHHHHHHHHH
Q 012238 400 -KSGKDWSFIL--RQI-GMFSFT--GL--NKAQSDNMTNKWHVYMTKD----G--RISLAGL-SLAKCEYLADAIIDS 462 (467)
Q Consensus 400 -g~~~~~~~~~--~~~-g~f~~~--~l--~~~~~~~ll~~~gI~v~~g----g--Ris~~~~-~~~~i~~~~~~l~~~ 462 (467)
|+.. .... ... ....|. +. +.++...+. +.|+.+.++ | |+|+... +.+|+++++++|+++
T Consensus 279 ~gl~~--~~~~~~~rs~~vvsf~~~~~~l~~~~~~~~~-r~G~~~~~~~~~~g~vR~S~~~~nt~edi~~l~~al~~~ 353 (355)
T cd00611 279 NGFYR--GPVDKRARSRMNVPFRLGKEELEKEFLKEAE-AAGMIGLKGHRSVGGIRASIYNALSLEGVQALADFMKEF 353 (355)
T ss_pred ccccc--cCCCHHHcCceEEEEEcCChhhhHHHHHHHH-HCCCcccCCCcccCeEEEEccCCCCHHHHHHHHHHHHHH
Confidence 5310 1111 122 213222 32 223334443 469875555 3 9998654 679999999999885
No 270
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.64 E-value=7.8e-13 Score=134.74 Aligned_cols=341 Identities=13% Similarity=0.103 Sum_probs=188.5
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCC--cCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCC
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENK--EYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 159 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~--~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g 159 (467)
+.+.||+..|..-..-|. -.|.|.+++.+.++..... .+.+.....+|-+.+++..... ..+++.+ +++
T Consensus 41 G~~ylD~~~g~~~~~lGH--~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~-----~~~~v~f--~~S 111 (445)
T PRK08593 41 GKTYIDLLASASSQNVGH--APPRVVEAIKAQADKFIHYTPAYMYHEPLVRLAKKLCELAPGD-----FEKRVTF--GLS 111 (445)
T ss_pred CCEEEECCccHHhhcCCC--CCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCC-----CCCEEEE--CCc
Confidence 347899977643112233 3678888888877542211 1112333344555555542111 0247888 999
Q ss_pred chhHHHHHHHHHHHhCCCCEEEEcCCCCcchHH-HHhhCCC-------------CeEEeeeecCCC--CC-CC-------
Q 012238 160 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKN-IFNDARV-------------PWSEYRYYDPKT--VG-LD------- 215 (467)
Q Consensus 160 gt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~-~~~~~G~-------------~~~~v~~~~~~~--~~-~d------- 215 (467)
|++|.+.+.++........+|+...-+|.+... .+...+. .++.+|..+... +. .+
T Consensus 112 GseA~e~AiklAr~~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 191 (445)
T PRK08593 112 GSDANDGIIKFARAYTGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEY 191 (445)
T ss_pred hHHHHHHHHHHHHHhhCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHH
Confidence 999999986554334333578888888876533 2222111 122333211100 00 11
Q ss_pred hhhHHHHHHcC--CCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhc
Q 012238 216 FEGMIADIKAA--PGGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR 292 (467)
Q Consensus 216 ~~~l~~~l~~~--~~~~~~i~i~~p~NPTG~~-~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~ 292 (467)
++.+++.+... +++..++++...+...|.. ++.+.+++|.++|++||+++|+||++.+|...+ ..+....+ .-
T Consensus 192 ~~~~~~~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~GrtG---~~~a~~~~-gv 267 (445)
T PRK08593 192 LAPLKEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTG---KWSSISHF-NI 267 (445)
T ss_pred HHHHHHHHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCc---hHHHHHhc-CC
Confidence 13344444321 2456677777777777886 688999999999999999999999998875321 11112111 21
Q ss_pred CCeEEEEecCccCcccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHH
Q 012238 293 GMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDE 372 (467)
Q Consensus 293 ~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~ 372 (467)
.++ +-+++|.++ .|+++|+++ .++++++. +.......+.+.+++++.++...|+. +
T Consensus 268 ~pD---i~t~gK~l~-~G~p~gav~---~~~~i~~~------------~~~~~~~~T~~~~pl~~aaa~a~l~~--l--- 323 (445)
T PRK08593 268 TPD---LMSFGKSLA-GGMPMSAIV---GRKEIMES------------LEAPAHLFTTGANPVSCAAALATIDM--I--- 323 (445)
T ss_pred CCC---Eeeeccccc-CCcccEEEE---EcHHHHhh------------hccCCCCCCCCCCHHHHHHHHHHHHH--H---
Confidence 233 337899998 789999985 77777776 43222222334555666655555431 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhh---ccCCCCCcccccCCcceEEe--cC-----C-C----HHHHHHHHHcccEEEe
Q 012238 373 WKAEMEMMAGRIKNVRQKLFDSLSA---KDKSGKDWSFILRQIGMFSF--TG-----L-N----KAQSDNMTNKWHVYMT 437 (467)
Q Consensus 373 ~~~~l~~~~~~~~~~r~~l~~~l~~---~~g~~~~~~~~~~~~g~f~~--~~-----l-~----~~~~~~ll~~~gI~v~ 437 (467)
++ +...++.+++-+++.+.|++ +.+. +..+...|.++-+ .. . + ..+...+++ +||++.
T Consensus 324 -~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~---v~~vrG~Gl~~gi~l~~~~~~~~~~~~~~~~~~~~~~~-~Gv~~~ 396 (445)
T PRK08593 324 -ED--ESLLQRSAEKGEYARKRFDQWVSKYNF---VGDVRGYGLSIGIDIVSDKKLKTRDNEAALKICNYCFE-HGVVII 396 (445)
T ss_pred -Hh--ccHHHHHHHHHHHHHHHHHHHHhcCCc---EEEEeccceEEEEEEecCCCcCCCcHHHHHHHHHHHHH-CCeEEe
Confidence 10 12333344444444444440 2221 1112223322211 11 0 1 123445555 699997
Q ss_pred CC-C---eEEec-cCChhhHHHHHHHHHHHHHhc
Q 012238 438 KD-G---RISLA-GLSLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 438 ~g-g---Ris~~-~~~~~~i~~~~~~l~~~l~~~ 466 (467)
+. + |++.. .+++++++++++++.++++++
T Consensus 397 ~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~ 430 (445)
T PRK08593 397 AVAGNVLRFQPPLVITYEQLDTALNTIEQAFTAL 430 (445)
T ss_pred ccCCCEEEEECCCccCHHHHHHHHHHHHHHHHHH
Confidence 74 3 66544 248899999999999998764
No 271
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.64 E-value=1e-13 Score=138.07 Aligned_cols=190 Identities=20% Similarity=0.123 Sum_probs=128.2
Q ss_pred hHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEE
Q 012238 103 LDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLI 182 (467)
Q Consensus 103 ~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv 182 (467)
.+...+++.+.+..+....+ ..-..+|.+.+++++.. ++++. +++||.|+++++..+ .+.+||+|++
T Consensus 4 ~~e~~~~v~~~l~s~~~~~~--g~~~~~fE~~~a~~~g~--------~~~~~--~~sgt~Al~~al~~l-~~~~gdeVi~ 70 (363)
T PF01041_consen 4 TEEEIDAVLEVLRSGWLSTY--GPYVEEFEKEFAEYFGV--------KYAVA--VSSGTSALHLALRAL-GLGPGDEVIV 70 (363)
T ss_dssp HHHHHHHHHHHHHHTCCSSS--SHHHHHHHHHHHHHHTS--------SEEEE--ESSHHHHHHHHHHHT-TGGTTSEEEE
T ss_pred CHHHHHHHHHHHHhCCccCC--CHHHHHHHHHHHHHhCC--------CeEEE--eCChhHHHHHHHHhc-CCCcCceEec
Confidence 45566677777766542322 34578999999999753 37777 899999999983221 2348999999
Q ss_pred cCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcC
Q 012238 183 SSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKN 262 (467)
Q Consensus 183 ~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~ 262 (467)
|.-+|......+...|++++.++++ ++++.+|++.+++.++ +++++|++.+.. |... ++.+|.++|+++|
T Consensus 71 p~~t~~~~~~ai~~~G~~pv~~Di~-~~~~~id~~~~~~~i~---~~t~ai~~~h~~---G~~~---d~~~i~~~~~~~~ 140 (363)
T PF01041_consen 71 PAYTFPATASAILWAGAEPVFVDID-PETLNIDPEALEKAIT---PKTKAILVVHLF---GNPA---DMDAIRAIARKHG 140 (363)
T ss_dssp ESSS-THHHHHHHHTT-EEEEE-BE-TTTSSB-HHHHHHHHH---TTEEEEEEE-GG---GB------HHHHHHHHHHTT
T ss_pred CCCcchHHHHHHHHhccEEEEEecc-CCcCCcCHHHHHHHhc---cCccEEEEecCC---CCcc---cHHHHHHHHHHcC
Confidence 9999999999999999999999996 6789999999999999 567777765433 5543 6778888899999
Q ss_pred CeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecC--ccCcccCCCccceEEEecCCHHHHhh
Q 012238 263 HIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSY--SKNLGLYAERIGAMNVVCSSSDLAAR 328 (467)
Q Consensus 263 ~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~--SK~~~~~G~RiG~~~~v~~~~~~~~~ 328 (467)
++||+|.+......- .... .-. ...+.+.|| +|.+. .|. -|.++ +.++++.++
T Consensus 141 i~lIeD~a~a~g~~~----~g~~---~G~--~gd~~~fSf~~~K~i~-~ge-GG~v~--~~~~~~~~~ 195 (363)
T PF01041_consen 141 IPLIEDAAQAFGARY----KGRP---VGS--FGDIAIFSFHPTKIIT-TGE-GGAVV--TNDPELAER 195 (363)
T ss_dssp -EEEEE-TTTTT-EE----TTEE---TTS--SSSEEEEESSTTSSS--SSS--EEEE--ESTHHHHHH
T ss_pred CcEEEccccccCcee----CCEe---ccC--CCCceEecCCCCCCCc-CCC-CeeEE--ecHHHHHHH
Confidence 999999994432210 0000 001 234556665 68885 554 35554 788888877
No 272
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.64 E-value=2.9e-13 Score=134.58 Aligned_cols=303 Identities=14% Similarity=0.079 Sum_probs=185.7
Q ss_pred CcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcch-HHHHhhCC
Q 012238 120 KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNH-KNIFNDAR 198 (467)
Q Consensus 120 ~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~-~~~~~~~G 198 (467)
..|.......+|.+++++++... .++. +++|+.|++++ +...+.|||.| +..+|... ...+...|
T Consensus 72 d~Yagd~s~~~LE~~vAe~lG~e--------~aV~--v~sGTaAl~ll--~~l~v~pGd~V--p~n~~f~Tt~ahI~~~G 137 (460)
T PRK13237 72 EAYAGSRNFYHLEETVQEYYGFK--------HVVP--THQGRGAENLL--SRIAIKPGQYV--PGNMYFTTTRYHQELNG 137 (460)
T ss_pred hhhcCCCcHHHHHHHHHHHHCCC--------eEEE--eCCHHHHHHHH--HHhCCCCcCEE--CCccchHhhHHHHHhCC
Confidence 56888888999999999996543 5666 89999999986 33346799965 55544433 33367788
Q ss_pred CCeEEeeee--------cCCCCCCChhhHHHHHHcC-CCCcEEEEeCCCCCCC-CCCCCHHHHHHHHHHHHhcCCeeEEe
Q 012238 199 VPWSEYRYY--------DPKTVGLDFEGMIADIKAA-PGGSFILLHGCAHNPT-GIDPTPEQWEKIADVIQEKNHIPFFD 268 (467)
Q Consensus 199 ~~~~~v~~~--------~~~~~~~d~~~l~~~l~~~-~~~~~~i~i~~p~NPT-G~~~~~~~l~~l~~~~~~~~~~li~D 268 (467)
+.++.+..+ ++.++.+|++.+++.+++. +.++.++.+..++|-. |...+.++++++.++|++||+.||+|
T Consensus 138 a~fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~D 217 (460)
T PRK13237 138 GIFVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFD 217 (460)
T ss_pred cEEEeeecccccccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEE
Confidence 855444311 2456889999999999853 2344455556678888 78899999999999999999999999
Q ss_pred ccCCCC-CC-C---CCCCChhHHHHHHh--cCCeEEEEecCccCcccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHH
Q 012238 269 VAYQGF-AS-G---SLDNDASSVRLFAT--RGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQL 341 (467)
Q Consensus 269 eay~~~-~~-~---~~~~~~~~~~~~~~--~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l 341 (467)
.+...- .+ - .......++...+. ......+..|++|.++.+ . -|++. +.++++.++ +
T Consensus 218 aAra~gna~fI~~re~~y~~~~i~ei~~e~~s~aD~~t~S~~K~~~~~-~-GG~i~--t~D~eL~~~------------~ 281 (460)
T PRK13237 218 ATRCVENAYFIKEREEGYQDKSIKEIVHEMFSYADGCTMSGKKDCLVN-I-GGFLA--MNDEELFDE------------A 281 (460)
T ss_pred CcchhcChhhhcccccccCCCcHhHHhhhccCcCcEEEEeCCCCCCCC-C-ceEEE--ECCHHHHHH------------H
Confidence 984311 00 0 00011112221111 112456788899999854 1 25554 789988887 5
Q ss_pred HhhccC-----ccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceEE
Q 012238 342 KRLARP-----MYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFS 416 (467)
Q Consensus 342 ~~~~~~-----~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~~~g~f~ 416 (467)
+...-. .+.+.+.-...+++.-|.+. ... +++..+. ...++|.+.|. +.|+ .+..|.||--+
T Consensus 282 r~~~~~~eG~~tygg~~grd~~alAvgl~E~-~~~---~y~~~ri----~~~~~l~~~L~-~~Gv----pv~~p~ggH~v 348 (460)
T PRK13237 282 KELVVVYEGMPSYGGMAGRDMEAMAIGIEES-VQY---EYIEHRV----GQVRYLGEKLL-AAGV----PIVEPVGGHAV 348 (460)
T ss_pred HHhccccCCCcCCCChhhhHHHHHHhHHHhh-chH---HHHHHHH----HHHHHHHHHHH-HCCC----ceecCCCceEE
Confidence 444211 12222221222222222211 110 1122222 34567888888 8885 56677777546
Q ss_pred ecC-------C------CHHHHHHHHHcccEEEeCC-----------C----------eEEecc--CChhhHHHHHHHHH
Q 012238 417 FTG-------L------NKAQSDNMTNKWHVYMTKD-----------G----------RISLAG--LSLAKCEYLADAII 460 (467)
Q Consensus 417 ~~~-------l------~~~~~~~ll~~~gI~v~~g-----------g----------Ris~~~--~~~~~i~~~~~~l~ 460 (467)
|++ + ...++..|-.+.||-...- | |+.+.. .+.+++++++++|.
T Consensus 349 ~vda~~~lph~~~~~~p~~al~~~ly~~~GiR~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~ 428 (460)
T PRK13237 349 FLDARRFLPHLPQDQFPAQALAAELYIESGVRSMERGIVSAGRDPKTGENHYPKLELVRLTIPRRVYTYAHMDVVADSVI 428 (460)
T ss_pred EEEhHHhCCCCCcccChHHHHHHHHHHHhCcCeEeecceecccCCCCCccCCCccceeeeccccccccHHHHHHHHHHHH
Confidence 653 1 1234555656667744321 1 887653 47789999999999
Q ss_pred HHHHh
Q 012238 461 DSYHN 465 (467)
Q Consensus 461 ~~l~~ 465 (467)
.+.++
T Consensus 429 ~~~~~ 433 (460)
T PRK13237 429 KLYKH 433 (460)
T ss_pred HHHHh
Confidence 88764
No 273
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.63 E-value=8.5e-13 Score=127.34 Aligned_cols=337 Identities=15% Similarity=0.086 Sum_probs=203.2
Q ss_pred CCCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCC--CCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecC
Q 012238 81 TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE--NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGL 158 (467)
Q Consensus 81 ~~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~--~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ 158 (467)
.+.+.|||..|.--+.-+. -+|.+.+++++.++.-+ +..| ...-..+|-+.+++.. + ..+++++ ++
T Consensus 40 ~G~~YlDf~~Giav~~lGH--~hP~iv~al~~Q~~kl~h~sn~~-~~~~~~~la~~L~~~s----~---~~d~vff--~N 107 (404)
T COG4992 40 QGREYLDFAAGIAVNNLGH--CHPALVEALKEQAEKLWHVSNLF-YNEPQAELAEKLVELS----P---FADRVFF--CN 107 (404)
T ss_pred CCCEeeeeccceeeeccCC--CCHHHHHHHHHHHHHhhhccccc-CChHHHHHHHHHHhhC----c---cccEEEE--cC
Confidence 4568999998865333343 36888888888664421 1233 2222334444444442 1 1579999 99
Q ss_pred CchhHHHHHHHHHHHhCC---CCEEEEcCCCCcchHHHHhhCCCCeEEe----eeecCCCC--CCChhhHHHHHHcCCCC
Q 012238 159 SGTGSLRLAAALIERYFP---GAKVLISSPTWGNHKNIFNDARVPWSEY----RYYDPKTV--GLDFEGMIADIKAAPGG 229 (467)
Q Consensus 159 ggt~al~l~~~~l~~~~~---gd~Vlv~~P~y~~~~~~~~~~G~~~~~v----~~~~~~~~--~~d~~~l~~~l~~~~~~ 229 (467)
+|++|++.+..+-..+.. .-+|+....+|..-....-..+.+..+- |+.+.-.+ --|++.+++++. +.
T Consensus 108 SGaEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpfnDi~al~~ai~---~~ 184 (404)
T COG4992 108 SGAEANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPFNDIEALEAAID---ED 184 (404)
T ss_pred CcHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCCCCHHHHHHHhc---cC
Confidence 999999999776655553 2378888887764332222222222111 11110000 148899999998 58
Q ss_pred cEEEEeCCCCCCCCCCCCH-HHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCccc
Q 012238 230 SFILLHGCAHNPTGIDPTP-EQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGL 308 (467)
Q Consensus 230 ~~~i~i~~p~NPTG~~~~~-~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~ 308 (467)
+..+++-.-+=-.|+..+. +-++++-++|++||+++|.||+-.++.-.+ ..+....+ .-.++++ ++.|.+|
T Consensus 185 taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTG---k~fA~e~~-gV~PDI~---tlaK~Lg- 256 (404)
T COG4992 185 TAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTG---KLFAYEHY-GVEPDIL---TLAKALG- 256 (404)
T ss_pred eEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccc---hHHHHHHh-CCCCCEE---Eeecccc-
Confidence 8888888888888987755 558999999999999999999966765332 22322111 2223444 4579999
Q ss_pred CCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHH
Q 012238 309 YAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVR 388 (467)
Q Consensus 309 ~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r 388 (467)
.|+.+|.++ ..++..+. +..-....+.+-+.++..++..+|+-- . -+...++.+++-
T Consensus 257 GG~PigA~l---a~~~~~~~------------~~~G~HgSTfGGNpLacAv~~a~l~~l--~------~e~ll~~v~~~g 313 (404)
T COG4992 257 GGFPIGAML---ATEEIASA------------FTPGDHGSTFGGNPLACAVALAVLEVL--L------EEGLLENVREKG 313 (404)
T ss_pred CCccceeeE---Echhhhhc------------CCCCcccCCCCcCHHHHHHHHHHHHHH--c------chhHHHHHHHHH
Confidence 889999996 44444443 333333345566677766666555311 0 013444455555
Q ss_pred HHHHHHhhhccCCCC-CcccccCCcceEEecCC--C---HHHHHHHHHcccEEEeCCC----eEEecc-CChhhHHHHHH
Q 012238 389 QKLFDSLSAKDKSGK-DWSFILRQIGMFSFTGL--N---KAQSDNMTNKWHVYMTKDG----RISLAG-LSLAKCEYLAD 457 (467)
Q Consensus 389 ~~l~~~l~~~~g~~~-~~~~~~~~~g~f~~~~l--~---~~~~~~ll~~~gI~v~~gg----Ris~~~-~~~~~i~~~~~ 457 (467)
++|.+.|+ ++.-+. .++-+... |+++=+.+ + .++++.+.+ .|+++.+.| |+.-.- +++++++++++
T Consensus 314 ~~~~~~L~-~l~~~~~~v~~vRG~-GLmiGiel~~~~~a~~~~~~~~~-~gvL~~~a~~~ViR~~PpL~i~~eei~~~~~ 390 (404)
T COG4992 314 EYLLQRLR-ELKRRYPLVKEVRGR-GLMIGIELKEPYRARDIVRALRE-EGVLVLPAGPNVIRFLPPLVITEEEIDEALD 390 (404)
T ss_pred HHHHHHHH-HHhhcCCceeeeecc-eeEEEEEecCcccHHHHHHHHHH-CCeEEecCCCCeEEecCCccCCHHHHHHHHH
Confidence 66666666 542110 12222222 33322222 2 345666555 599998887 776443 48899999999
Q ss_pred HHHHHHHhc
Q 012238 458 AIIDSYHNV 466 (467)
Q Consensus 458 ~l~~~l~~~ 466 (467)
+|.+++++.
T Consensus 391 ~l~~~l~~~ 399 (404)
T COG4992 391 ALERALAAA 399 (404)
T ss_pred HHHHHHHHh
Confidence 999998754
No 274
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.63 E-value=3.7e-13 Score=137.58 Aligned_cols=335 Identities=16% Similarity=0.143 Sum_probs=186.2
Q ss_pred CcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCC------CCcchHHHHHH----HHHHHhCCCCcccccCce-
Q 012238 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYL------PIEGLAAFNKV----TAELLFGADNSVLKEQRV- 152 (467)
Q Consensus 84 ~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~------~~~G~~~lr~a----ia~~l~~~~~~~~~~~~i- 152 (467)
+.|+|-..++ ++++.+++++...+...+..+|+ ......++.+. ..+.+... .+.+
T Consensus 35 ~~l~liasen-------~~s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~lE~~~~~~~~~~f~~~------~~~~~ 101 (475)
T PLN03226 35 KGLELIASEN-------FTSRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQIETLCQKRALEAFRLD------PEKWG 101 (475)
T ss_pred cCeeEecCCc-------cCCHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHHHHHHHHHHHHHhCCC------cceeE
Confidence 6788887665 23788999998887433333332 22334444431 22222222 3333
Q ss_pred eeeecCCchhHHHHHHHHHHHhCCCCEEEEcC---CCCcchHHHHh---hCCCCe--E--EeeeecCCCCCCChhhHHHH
Q 012238 153 ATVQGLSGTGSLRLAAALIERYFPGAKVLISS---PTWGNHKNIFN---DARVPW--S--EYRYYDPKTVGLDFEGMIAD 222 (467)
Q Consensus 153 ~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~---P~y~~~~~~~~---~~G~~~--~--~v~~~~~~~~~~d~~~l~~~ 222 (467)
+-+|..+|+.|...+ +.+++.|||+|+..+ .++..+..... ..+... . .+.. +.+++.+|++.+++.
T Consensus 102 ~nv~~~SG~~AN~av--~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~-~~~~g~iD~d~Le~~ 178 (475)
T PLN03226 102 VNVQPLSGSPANFAV--YTALLQPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRL-DESTGLIDYDKLEKK 178 (475)
T ss_pred EecCcCchHHHHHHH--HHHhCCCCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeee-cCCCCCcCHHHHHHH
Confidence 445668888888877 666788999999854 34444333221 111111 1 2333 245678999999999
Q ss_pred HHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecC
Q 012238 223 IKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSY 302 (467)
Q Consensus 223 l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~ 302 (467)
+.+. +++++++. .++ +|...+.+ +|.++|+++|.++++|+++..-..+. +....++ + .-.++++|+
T Consensus 179 l~~~--~pklIv~~-~S~-~s~~~D~a---~i~~ia~~~ga~LlvD~AH~~Gli~~-~~~~~p~----~--~~Div~~t~ 244 (475)
T PLN03226 179 AMLF--RPKLIIAG-ASA-YPRDWDYA---RMRKIADKVGALLMCDMAHISGLVAA-QEAASPF----E--YCDVVTTTT 244 (475)
T ss_pred Hhhc--CCeEEEEe-cCc-CCCccCHH---HHHHHHHHcCCEEEEEchhhhCcccC-CCCCCCC----C--CCeEEEecC
Confidence 8753 44555543 233 56666655 67777999999999999854222111 1111111 1 235789999
Q ss_pred ccCc-ccCCCccceEEEecCCHHHHhhhhhh--hHHHHHHHHHhhccCccC-CCchHHHHHHHHHhCChhhHHHHHHHHH
Q 012238 303 SKNL-GLYAERIGAMNVVCSSSDLAARCCEV--AVIQVKSQLKRLARPMYS-NPPVHGARIVANVVGNPALFDEWKAEME 378 (467)
Q Consensus 303 SK~~-~~~G~RiG~~~~v~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~L~~~~~~~~~~~~l~ 378 (467)
+|++ |+.| |++. .+++.++..... .+.++...+.....+.+. +++.....++..+|.. ......+
T Consensus 245 hK~L~GP~G---g~I~---~~~~~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~-----i~~~~~~ 313 (475)
T PLN03226 245 HKSLRGPRG---GMIF---FRKGPKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQ-----AMTPEFK 313 (475)
T ss_pred cccccCCCc---eEEE---EchhhcccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHH-----HhCcCHH
Confidence 9998 5444 6664 344433110000 000011112222222233 3332222222222221 1011245
Q ss_pred HHHHHHHHHHHHHHHHhhhccCCCCCcccccCCc-ceEEec-----CCCHHHHHHHHHcccEEEeCC------------C
Q 012238 379 MMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQI-GMFSFT-----GLNKAQSDNMTNKWHVYMTKD------------G 440 (467)
Q Consensus 379 ~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~~~-g~f~~~-----~l~~~~~~~ll~~~gI~v~~g------------g 440 (467)
+.++++.++.++|.+.|. +.| +++..+.. .-.+++ +++...+.+.|++.||.+..+ |
T Consensus 314 ~~~~~~~~na~~L~~~L~-~~G----~~l~~~~t~~hi~lv~~~~~gi~~~~~~~~L~~~~I~~nk~~~p~~~~~~~~~g 388 (475)
T PLN03226 314 AYQKQVKANAAALANRLM-SKG----YKLVTGGTDNHLVLWDLRPLGLTGSRVEKVLDLAHITLNKNAVPGDSSALVPGG 388 (475)
T ss_pred HHHHHHHHHHHHHHHHHH-hCC----CEEEcCCCCCCEEEEEccCCCCCHHHHHHHHHHCCCEECCCCCCCCcccCCCCC
Confidence 678888899999999998 777 45544211 112222 456677888888889988643 2
Q ss_pred -eE-----EeccCChhhHHHHHHHHHHHHH
Q 012238 441 -RI-----SLAGLSLAKCEYLADAIIDSYH 464 (467)
Q Consensus 441 -Ri-----s~~~~~~~~i~~~~~~l~~~l~ 464 (467)
|+ .-.++++++++++.+.|.++++
T Consensus 389 iRiGt~~lt~~g~~~~d~~~ia~~i~~~~~ 418 (475)
T PLN03226 389 VRIGTPAMTSRGLVEKDFEKVAEFLHRAVT 418 (475)
T ss_pred cccCcHHHHHCCCCHHHHHHHHHHHHHHHH
Confidence 55 3334588999999999999987
No 275
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.63 E-value=3.1e-13 Score=136.25 Aligned_cols=322 Identities=12% Similarity=0.066 Sum_probs=193.5
Q ss_pred hHHHHHHHHHHHhcCCCCcCCCCcc----hHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHh----
Q 012238 103 LDVVKKAENLMLERGENKEYLPIEG----LAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY---- 174 (467)
Q Consensus 103 ~~~v~~a~~~~~~~~~~~~Y~~~~G----~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~---- 174 (467)
.+.+.+++...++... ..+..... ..+.++.++++++.. -..+++....|+|||+|+.++.......
T Consensus 54 ~p~~~~~~~~~l~~~~-~np~s~~~~~~le~~~~~~la~llg~~----~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~ 128 (431)
T TIGR01788 54 EPEARKLMDETINKNM-IDKDEYPQTAEIENRCVNMLADLWHAP----AKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKR 128 (431)
T ss_pred CHHHHHHHHHHHhcCC-CCcccCccHHHHHHHHHHHHHHHhCCC----CCCCCCeEEEechHHHHHHHHHHHHHHHHHHH
Confidence 6668888888775322 12211222 344455555554321 0013454433799999999873221100
Q ss_pred --CCC-----CEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCC
Q 012238 175 --FPG-----AKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPT 247 (467)
Q Consensus 175 --~~g-----d~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~ 247 (467)
..| ..|+++.-.+..+...++..|++++.+|+++ .++.+|++.|++.++ +++.+|+++..+|.||.+.+
T Consensus 129 ~~~~g~~~~~~~ii~s~~~H~sv~ka~~~lg~~v~~i~~d~-~~~~vd~~~L~~~i~---~~t~lV~~t~g~t~tG~idp 204 (431)
T TIGR01788 129 MEAAGKPTDKPNLVMGSNVQVCWEKFARYFDVELREVPMDP-GRYVIDPEQVVEAVD---ENTIGVVCILGTTYTGEYED 204 (431)
T ss_pred HHhcCCCCCCcEEEEcCcchHHHHHHHHHcCceeEEEecCC-CceeeCHHHHHHHHh---hCCeEEEEEeCCCCCcccCC
Confidence 112 3788888999999999999999999999853 345799999999998 56789999999999999988
Q ss_pred HHHHHHHHHHHHhc------CCeeEEeccCCCCC----CCCCCCChhHHHHHHhcCCeEEEEecCccCc-ccCCCccceE
Q 012238 248 PEQWEKIADVIQEK------NHIPFFDVAYQGFA----SGSLDNDASSVRLFATRGMELLVAQSYSKNL-GLYAERIGAM 316 (467)
Q Consensus 248 ~~~l~~l~~~~~~~------~~~li~Deay~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-~~~G~RiG~~ 316 (467)
.+ +|+++|+++ |+++.+|.+|.++. .+.. .. .+ ....-..+..|.+|.+ ++.| +|.+
T Consensus 205 i~---~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~-----~~-~~-~~~~~DSis~s~HK~~~~P~g--~G~l 272 (431)
T TIGR01788 205 VK---ALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDL-----EW-DF-RLPRVKSINVSGHKYGLVYPG--VGWV 272 (431)
T ss_pred HH---HHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCc-----hh-hc-CCCCceEEEECchhccCCCCC--cEEE
Confidence 76 556668888 99999999988543 2211 11 11 1112344678889976 7666 5877
Q ss_pred EEecCCHHHH-hhhhhhhHHHHHHHHHh---hccC----ccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHH
Q 012238 317 NVVCSSSDLA-ARCCEVAVIQVKSQLKR---LARP----MYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVR 388 (467)
Q Consensus 317 ~~v~~~~~~~-~~~~~~~~~~~~~~l~~---~~~~----~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r 388 (467)
+ ..+++.. +. +.. +... .....+.-+..++..++. +...-...++++.++..+..
T Consensus 273 ~--~r~~~~l~~~------------~~~~~~yl~~~~~~~t~~~sR~g~~al~~w~~---l~~lG~~G~~~i~~~~~~la 335 (431)
T TIGR01788 273 I--WRDEEALPEE------------LIFHVNYLGGDEPTFTLNFSRPANQVIAQYYN---FLRLGREGYRKIMQNSLDVA 335 (431)
T ss_pred E--EeChHHcchh------------heecccccCCCCCCcceecCchHHHHHHHHHH---HHHhcHHHHHHHHHHHHHHH
Confidence 5 2443322 21 110 0000 000011111111111110 11001234667778888888
Q ss_pred HHHHHHhhhccCCCCCcccccC--CcceEEec--C-----CCHHHHHHHHHcccEEE----eCC---C----eEEec-cC
Q 012238 389 QKLFDSLSAKDKSGKDWSFILR--QIGMFSFT--G-----LNKAQSDNMTNKWHVYM----TKD---G----RISLA-GL 447 (467)
Q Consensus 389 ~~l~~~l~~~~g~~~~~~~~~~--~~g~f~~~--~-----l~~~~~~~ll~~~gI~v----~~g---g----Ris~~-~~ 447 (467)
+++.+.|+ +.+. |+.+.+ ..+...|. + .+...+.+.|++.|+.+ .|. | |+++. ..
T Consensus 336 ~~l~~~L~-~~~~---~el~~~~~~~~iV~Fr~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~p~~~~~~~~lR~~~~~~~ 411 (431)
T TIGR01788 336 RYLAEEIA-KLGP---FEIISDGSGIPLVAFKLKDDADPGYTLYDLSHRLRERGWIVPAYTLPKNAEDIVVMRIVVREGF 411 (431)
T ss_pred HHHHHHHH-hCCC---EEEeeCCCCceEEEEEeCCCCCCCcCHHHHHHHHHHCCCcccCCCCCCccCCeEEEEEEecCCC
Confidence 99999998 7642 565543 45554443 2 33344444455569863 332 3 88774 34
Q ss_pred ChhhHHHHHHHHHHHHHhc
Q 012238 448 SLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 448 ~~~~i~~~~~~l~~~l~~~ 466 (467)
+++.++.+++.|.+++.++
T Consensus 412 ~~~~~~~~~~~~~~~~~~~ 430 (431)
T TIGR01788 412 SRDLAELLIEDIEAALAYL 430 (431)
T ss_pred CHHHHHHHHHHHHHHHHhh
Confidence 6789999999999998765
No 276
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.63 E-value=4.4e-13 Score=130.61 Aligned_cols=327 Identities=17% Similarity=0.154 Sum_probs=199.7
Q ss_pred CCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCC-CCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCch
Q 012238 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYL-PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (467)
Q Consensus 83 ~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~-~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (467)
...||+..|.-..--+. -+|.|.+|+++.+..+. .|. |....-++-+.+.+.... -+.|-+ +++||
T Consensus 53 n~YIDy~~~~Gp~ilGH--~~p~V~~Av~~~l~~G~--~fg~Pte~Ei~~Aell~~~~p~-------~e~vrf--vnSGT 119 (432)
T COG0001 53 NEYIDYVLGWGPLILGH--AHPAVVEAVQEQLERGL--SFGAPTELEVELAELLIERVPS-------IEKVRF--VNSGT 119 (432)
T ss_pred CEeeehhccCcccccCC--CCHHHHHHHHHHHHhcC--CCCCCCHHHHHHHHHHHHhcCc-------ccEEEE--ecchh
Confidence 47888887753221222 36889999999998874 443 443333344444444211 367877 89999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhh-CC--C-----------------CeEEeeeecCCCCCCChhhHHH
Q 012238 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFND-AR--V-----------------PWSEYRYYDPKTVGLDFEGMIA 221 (467)
Q Consensus 162 ~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~-~G--~-----------------~~~~v~~~~~~~~~~d~~~l~~ 221 (467)
+|...+.++-..+..-|+|+..+-||..+.+.+.. .| . .++.+|+ .|++.+++
T Consensus 120 EAtmsAiRlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~y-------ND~~al~~ 192 (432)
T COG0001 120 EATMSAIRLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPY-------NDLEALEE 192 (432)
T ss_pred HHHHHHHHHHHHhhCCCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEecC-------CCHHHHHH
Confidence 99999877666666779999999999877665432 22 1 1122222 49999999
Q ss_pred HHHcCCCCcE-EEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEe
Q 012238 222 DIKAAPGGSF-ILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQ 300 (467)
Q Consensus 222 ~l~~~~~~~~-~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 300 (467)
++++.++... +|+-+-..|--=+...++-++.|.++|+++|.++|.||+..+|...- .... ....-.++ +.
T Consensus 193 ~~~~~g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~--gGaq---~~~gi~PD---lt 264 (432)
T COG0001 193 AFEEYGDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVAL--GGAQ---GYYGVEPD---LT 264 (432)
T ss_pred HHHHcCCcEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCC--cccc---cccCcCcc---hh
Confidence 9998654444 44444455533334556779999999999999999999987776531 0011 11111122 34
Q ss_pred cCccCcccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhc---cCccCCCchHHHHHHHHHhCChhhHHHHHHHH
Q 012238 301 SYSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLA---RPMYSNPPVHGARIVANVVGNPALFDEWKAEM 377 (467)
Q Consensus 301 S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l 377 (467)
.|.|..| .|+.+|.+ .+..++++. +.... ...+.+.+.++..+....|.. +.+ -
T Consensus 265 tlGKiIG-GGlP~ga~---gGr~eiM~~------------~~p~g~vyqaGT~sgnplamaAG~atl~~--l~~-----~ 321 (432)
T COG0001 265 TLGKIIG-GGLPIGAF---GGRAEIMEQ------------LAPLGPVYQAGTLSGNPLAMAAGLATLEE--LMT-----E 321 (432)
T ss_pred hhhhhhc-CCcceeee---ccHHHHHhh------------hCCCCCccccCCCCCcHHHHHHHHHHHHH--HHh-----c
Confidence 5789999 99999999 477777775 33221 112233444444444443321 110 0
Q ss_pred HHHHHHHHHHH----HHHHHHhhhccCCCCCcccccCCcceE-Eec-C--C---------C----HHHHHHHHHcccEEE
Q 012238 378 EMMAGRIKNVR----QKLFDSLSAKDKSGKDWSFILRQIGMF-SFT-G--L---------N----KAQSDNMTNKWHVYM 436 (467)
Q Consensus 378 ~~~~~~~~~~r----~~l~~~l~~~~g~~~~~~~~~~~~g~f-~~~-~--l---------~----~~~~~~ll~~~gI~v 436 (467)
+...+++.+.- +-+.+.+. +.|++ +.+ ...+++| ++. . . + ..++..|+++ ||++
T Consensus 322 ~~~y~~l~~~~~~L~~gl~~~~~-~~g~~--~~v-~~~gsm~~i~F~~~~~~n~~da~~sd~~~~~~~~~~~l~~-GV~l 396 (432)
T COG0001 322 EGVYERLDALGERLAEGLRAAAE-RHGIP--LTV-NRVGSMFGIFFTEEGVRNYADAKRSDVERFAKFFHHLLNR-GVYL 396 (432)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHH-HhCCC--eEE-eeecceEEEEecCCCCCCHHHHHhhchHHHHHHHHHHHhC-Cccc
Confidence 01233333333 44444444 56653 232 3345555 332 2 1 1 1345577765 9999
Q ss_pred eCCC----eEEeccCChhhHHHHHHHHHHHHHhc
Q 012238 437 TKDG----RISLAGLSLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 437 ~~gg----Ris~~~~~~~~i~~~~~~l~~~l~~~ 466 (467)
.|+. -+|.+. ++++|++.++++.++++++
T Consensus 397 ~ps~~ea~flS~ah-te~di~~~~~a~~~~~~~~ 429 (432)
T COG0001 397 APSQFEAGFLSTAH-TEEDIDRTLEAADEAFKEL 429 (432)
T ss_pred CCccccceeeeccc-CHHHHHHHHHHHHHHHHHh
Confidence 9984 677777 8999999999999998765
No 277
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.63 E-value=7.6e-13 Score=132.95 Aligned_cols=337 Identities=11% Similarity=0.015 Sum_probs=192.1
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCch
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (467)
+.+.|||..|..-+.-|.- .|.|.+++.+.+.... ..+. ....+....+++++....+ .+++++ +++|+
T Consensus 35 G~~~lD~~sg~~~~~lGh~--~p~v~~a~~~q~~~~~-~~~~--~~~~~~~~~la~~l~~~~~----~~~v~f--~~SGs 103 (395)
T PRK03715 35 GKRYLDFIQGWAVNCLGHC--NPGMVEALAAQAEKLI-NPSP--AFYNEPMAKLAGLLTQHSC----FDKVFF--ANSGA 103 (395)
T ss_pred CCEEEECCcChhhccCCCC--CHHHHHHHHHHHHhcc-cccc--cccCHHHHHHHHHHhhccC----CCEEEE--eCCcH
Confidence 4588999877542223433 5778888887765422 2221 1234566778888765321 357888 99999
Q ss_pred hHHHHHHHHHHHhC----CC-CEEEEcCCCCcchHH-HHhhCCCCeE---EeeeecCC--CCCCChhhHHHHHHcCCCCc
Q 012238 162 GSLRLAAALIERYF----PG-AKVLISSPTWGNHKN-IFNDARVPWS---EYRYYDPK--TVGLDFEGMIADIKAAPGGS 230 (467)
Q Consensus 162 ~al~l~~~~l~~~~----~g-d~Vlv~~P~y~~~~~-~~~~~G~~~~---~v~~~~~~--~~~~d~~~l~~~l~~~~~~~ 230 (467)
+|.+.+..+..... +| .+|+....+|..... .+...|.... ..|..... ....|++.+++.+. +++
T Consensus 104 eA~e~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~---~~~ 180 (395)
T PRK03715 104 EANEGAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAELNDIASVEKLIT---DKT 180 (395)
T ss_pred HHHHHHHHHHHHHhhccCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCCceeeCCchHHHHHHHcC---CCc
Confidence 99999866554331 23 578888988876533 3333332211 11110000 01247888888886 456
Q ss_pred EEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccC
Q 012238 231 FILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY 309 (467)
Q Consensus 231 ~~i~i~~p~NPTG~~~-~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~ 309 (467)
.++++...++..|... +.+.+++|.++|++||+++|+||++.++.-.+ ..+.... ..-.+++ .+++|.++ .
T Consensus 181 aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG---~~~a~~~-~gv~PDi---~t~gK~lg-~ 252 (395)
T PRK03715 181 VAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTG---TLFAYEL-SGIEPDI---MTLGKGIG-G 252 (395)
T ss_pred eEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCc---chhhHhh-cCCCCce---eeehhhhh-C
Confidence 6777776666667764 68889999999999999999999998864321 1111111 1222332 46789998 6
Q ss_pred CCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHH
Q 012238 310 AERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQ 389 (467)
Q Consensus 310 G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~ 389 (467)
|+.+|.++ ..+++... ........+ +.++++..++...|+. + ++ +...++.+++-+
T Consensus 253 G~p~~av~---~~~~i~~~------------~~~~~~~T~-~g~pl~~aaala~L~~--l----~~--~~l~~~~~~~g~ 308 (395)
T PRK03715 253 GVPLAALL---AKAEVAVF------------EAGDQGGTY-NGNPLMTAVGVAVISQ--L----LA--PGFLEGVRARGE 308 (395)
T ss_pred CcceEEEE---Eccccccc------------cCCCcCCCC-CCCHHHHHHHHHHHHH--H----Hh--ccHHHHHHHHHH
Confidence 88889885 55554321 111111222 3344554555444421 1 10 134455555556
Q ss_pred HHHHHhhhccCCCCCcccccCCcceEEecCC--C-HHHHHHHHHcc---cEEEeCCC----eEEec-cCChhhHHHHHHH
Q 012238 390 KLFDSLSAKDKSGKDWSFILRQIGMFSFTGL--N-KAQSDNMTNKW---HVYMTKDG----RISLA-GLSLAKCEYLADA 458 (467)
Q Consensus 390 ~l~~~l~~~~g~~~~~~~~~~~~g~f~~~~l--~-~~~~~~ll~~~---gI~v~~gg----Ris~~-~~~~~~i~~~~~~ 458 (467)
++.+.|+ ++.....+......| ..+-+.+ + ...+.+.+.+. ||++.+.+ ||+.. .++++++++++++
T Consensus 309 ~l~~~L~-~l~~~~~i~~vrG~G-lm~~i~l~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~lR~~p~l~~t~~ei~~~~~~ 386 (395)
T PRK03715 309 YLKEKLL-ELSEERGLEGERGEG-LLRALLLGKDIGPQIVEKARDMQPDGLLLNAPRPNLLRFMPALNVTTEEIDQMIAM 386 (395)
T ss_pred HHHHHHH-HHhhcCCcCeEEcce-eEEEEEecCchHHHHHHHHHhccCCCEEEeecCCCEEEEeCCcccCHHHHHHHHHH
Confidence 6666665 431100122223333 3322222 1 22333333334 99986543 77754 3488999999999
Q ss_pred HHHHHHhc
Q 012238 459 IIDSYHNV 466 (467)
Q Consensus 459 l~~~l~~~ 466 (467)
|.++++++
T Consensus 387 l~~~l~~~ 394 (395)
T PRK03715 387 LRSVLDKL 394 (395)
T ss_pred HHHHHHhh
Confidence 99999865
No 278
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.62 E-value=2.6e-13 Score=133.95 Aligned_cols=312 Identities=15% Similarity=0.045 Sum_probs=187.0
Q ss_pred hHHHHHHHHHHHhc---CCCCcCCCC-------cchHHHHHHHHHHHhCCCCcccccCceeeeecCC-chhHHHHHHHHH
Q 012238 103 LDVVKKAENLMLER---GENKEYLPI-------EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS-GTGSLRLAAALI 171 (467)
Q Consensus 103 ~~~v~~a~~~~~~~---~~~~~Y~~~-------~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g-gt~al~l~~~~l 171 (467)
|..|.+++.+.+.. .....|... .-..+.|+.+++++.... ..+|++ +.| ||++++.+ +.
T Consensus 4 p~~v~~~~~~~~~~~~~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~-----~~~v~~--~~gsgT~a~ea~--~~ 74 (349)
T TIGR01364 4 PEEVLEQAQKELLNFNGTGMSVMEISHRSKEFEAVANEAESDLRELLNIPD-----NYEVLF--LQGGATGQFAAV--PL 74 (349)
T ss_pred CHHHHHHHHHHHhCccCCCccccccCCCchHHHHHHHHHHHHHHHHhCCCC-----CceEEE--EcCCchHHHHHH--HH
Confidence 66777887777642 111112111 224555666777654311 346766 655 99999998 55
Q ss_pred HHhCCCCEEEEcCCCCc--chHHHHhhCCCCeEEeeeecC--CCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCC
Q 012238 172 ERYFPGAKVLISSPTWG--NHKNIFNDARVPWSEYRYYDP--KTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPT 247 (467)
Q Consensus 172 ~~~~~gd~Vlv~~P~y~--~~~~~~~~~G~~~~~v~~~~~--~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~ 247 (467)
..+.+||+|++..-+.. .+.++++..|. +..+...+. ....+|++.++. + ++.+++.+++..|.||+..+
T Consensus 75 nl~~~~~~~l~i~~G~fg~r~~~~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~v~~th~ETstGv~~~ 148 (349)
T TIGR01364 75 NLLAEGKVADYIVTGAWSKKAAKEAKKYGV-VNVVASGKEGNYTKIPDPSTWEI--S---EDAAYVHYCANETIHGVEFR 148 (349)
T ss_pred hcCCCCCeEEEEECCHHHHHHHHHHHHhCC-cEEEeccccCCCCCCCCHHhcCC--C---CCCCEEEEcCCCCcccEecc
Confidence 55668999888876664 45678889998 777765321 233466665542 2 46778888999999999775
Q ss_pred HHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecCCHHHHh
Q 012238 248 PEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAA 327 (467)
Q Consensus 248 ~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~ 327 (467)
++++.+++++++|.+ +.+.....+.+ +. + +++.|..|.+|+|| +|.++ .+++.++
T Consensus 149 --------~l~~~~~~l~iVDav-ss~g~~~id~~--------~~-d--~~~~ssqK~lgP~G--lg~l~---~s~~~~~ 203 (349)
T TIGR01364 149 --------ELPDVKNAPLVADMS-SNILSRPIDVS--------KF-G--LIYAGAQKNIGPAG--LTVVI---VRKDLLG 203 (349)
T ss_pred --------eecccCCCeEEEEcc-ccccCccCCHH--------Hc-c--EEEEecccccCCCc--eEEEE---ECHHHHh
Confidence 446668999999999 55554322211 11 2 77888889999888 47775 5566665
Q ss_pred hhhhhhHHHHHHHHHh-h-ccCccCCCchHHHHHHHHHhCChhhHHHHHH-HHHHHHHHHHHHHHHHHHHhhhccC-CCC
Q 012238 328 RCCEVAVIQVKSQLKR-L-ARPMYSNPPVHGARIVANVVGNPALFDEWKA-EMEMMAGRIKNVRQKLFDSLSAKDK-SGK 403 (467)
Q Consensus 328 ~~~~~~~~~~~~~l~~-~-~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~-~l~~~~~~~~~~r~~l~~~l~~~~g-~~~ 403 (467)
+ .++....+.+ ... . .......++.....++..+|+. + -+. .++++.++.++..+++++.|+ +++ +-.
T Consensus 204 ~-~~~~~~~~~~-~~~~~~~~~~~~Tp~~~~i~al~~al~~--l---~~~gG~e~i~~r~~~l~~~l~~~l~-~~~gl~~ 275 (349)
T TIGR01364 204 R-ASRITPSMLN-YKIHAENDSMYNTPPTFAIYVSGLVFKW--L---KEQGGVKAIEKRNQAKAQLLYDTID-NSNGFYR 275 (349)
T ss_pred h-cccCCCCcch-HHHHHhcCCCCCCCcHHHHHHHHHHHHH--H---HHcCCHHHHHHHHHHHHHHHHHHHH-hCCCeec
Confidence 4 1111111111 111 1 0111234444444444444421 1 123 378899999999999999999 874 311
Q ss_pred CcccccC--Cc-ceEEec--CC--CHHHHHHHHHcccEEEeCC----C--eEEeccC-ChhhHHHHHHHHHHHHHh
Q 012238 404 DWSFILR--QI-GMFSFT--GL--NKAQSDNMTNKWHVYMTKD----G--RISLAGL-SLAKCEYLADAIIDSYHN 465 (467)
Q Consensus 404 ~~~~~~~--~~-g~f~~~--~l--~~~~~~~ll~~~gI~v~~g----g--Ris~~~~-~~~~i~~~~~~l~~~l~~ 465 (467)
....+ .. ....+. +. +.++.. .+.+.|+++.++ | |+|+... +.+++++++++|++++++
T Consensus 276 --~~~~~~~rs~~v~sf~~~~~~~~~~~~~-~~~~~Gi~~~~~~~~~g~vRvS~~~~nt~edid~l~~al~~~~~~ 348 (349)
T TIGR01364 276 --NPVDPRNRSRMNVVFTLGNEELEKRFLK-EAEERGLVSLKGHRSVGGMRASIYNAMPLEGVQALVDFMKEFQKK 348 (349)
T ss_pred --cCCCHHHcCCeEEEEecCChhHhHHHHH-HHHHCCCcccCCccccCeeEEECcCCCCHHHHHHHHHHHHHHHHh
Confidence 10111 12 222222 22 233334 444569977666 3 9997654 679999999999998765
No 279
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=99.62 E-value=9.1e-15 Score=136.96 Aligned_cols=286 Identities=11% Similarity=0.090 Sum_probs=163.5
Q ss_pred hHHHHHHHHHHHhCCCCccccc-CceeeeecCCchhHHHHHHHHHHHh--C--CCCEEEEcCCCCcchHHHHhhCCCCeE
Q 012238 128 LAAFNKVTAELLFGADNSVLKE-QRVATVQGLSGTGSLRLAAALIERY--F--PGAKVLISSPTWGNHKNIFNDARVPWS 202 (467)
Q Consensus 128 ~~~lr~aia~~l~~~~~~~~~~-~~i~~~~t~ggt~al~l~~~~l~~~--~--~gd~Vlv~~P~y~~~~~~~~~~G~~~~ 202 (467)
.++|.+.|.++ ++.-|..+.. ..|++ ..|+|+.++.+.-.|+.. . +--+|+...|+|+.|......+.-...
T Consensus 45 s~eL~~~Ir~L-H~~VGNAvt~gr~IV~--GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~qt~~f~s~~y 121 (363)
T PF04864_consen 45 SPELERQIRRL-HRVVGNAVTDGRYIVF--GTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPEQTDFFDSRLY 121 (363)
T ss_dssp -HHHHHHHHHH-HHHH-SB--TTSEEEE--ECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHHHCCCT-BTTE
T ss_pred cHHHHHHHHHH-HHHhccccccCcEEEE--cCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHHHHHhccccCc
Confidence 57888888877 5444444444 46777 899999988873333222 1 224899999999999988776544333
Q ss_pred EeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCC
Q 012238 203 EYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDND 282 (467)
Q Consensus 203 ~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~ 282 (467)
...-+ ...+. ......+.+=++++||||.|.+- +.+ ++..+..+|.|-+|.+-.|..+.
T Consensus 122 ~w~Gd-a~~~~----------~~~~~~~~IElVTSPNNPDG~lr-----~~V---~~g~~~k~I~D~AYYWPhyTpI~-- 180 (363)
T PF04864_consen 122 KWAGD-ASNFK----------NSDNPSPYIELVTSPNNPDGQLR-----EAV---LNGSSGKVIHDLAYYWPHYTPIT-- 180 (363)
T ss_dssp EEEEE-CCCGT----------T-S-CCGEEEEEESS-TTT-----------S---STTTEEEEEEE-TT-STTTS-----
T ss_pred ccccc-HHhhc----------cCCCCCCeEEEEeCCCCCccccc-----chh---cCCCCcceeeeeeeecccccccC--
Confidence 33221 22221 11124677888999999999742 223 34456678999999988775321
Q ss_pred hhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHH
Q 012238 283 ASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVAN 362 (467)
Q Consensus 283 ~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 362 (467)
...++.|.+.++||.-|-+|-|+||.+ ..++++.++ |..+....+.+++.-+|.-++.
T Consensus 181 --------~~aD~DiMLFT~SK~TGHAGSR~GWAl--VKD~~Va~k------------M~~y~~lnTiGvS~dsQLRa~k 238 (363)
T PF04864_consen 181 --------APADHDIMLFTLSKLTGHAGSRFGWAL--VKDEEVAKK------------MTKYMELNTIGVSRDSQLRALK 238 (363)
T ss_dssp --------S-B--SEEEEEHHHHCS-GGG-EEEEE--ES-HHHHHH------------HHHHHHHHCSS--HHHHHHHHH
T ss_pred --------CCCCCceEEEEEecccCccccccceee--ecCHHHHHH------------HHHHHHHhcccCcHHHHHHHHH
Confidence 233577899999999999999999997 589988887 6666666677888888876666
Q ss_pred HhCC----hhhH----HHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC----CC---cccccCCcceEEecCCCH---HH
Q 012238 363 VVGN----PALF----DEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSG----KD---WSFILRQIGMFSFTGLNK---AQ 424 (467)
Q Consensus 363 ~L~~----~~~~----~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~~----~~---~~~~~~~~g~f~~~~l~~---~~ 424 (467)
+|.- .+.. +.++-..+.+++|+++.++.+...= ...+| .- +.-......-|.|++... +.
T Consensus 239 iLk~v~~~~~~~~~~~~~F~f~~~~M~~RW~~L~~~~~~S~--rFSLq~~~~~yC~ff~~~~~psPafAWlkCe~eed~D 316 (363)
T PF04864_consen 239 ILKVVLDGYGTEKGTEDIFHFGYSTMRERWEKLRAAVSASK--RFSLQKFSPQYCNFFKRVREPSPAFAWLKCEREEDED 316 (363)
T ss_dssp HHHHHHHHCCHHTTTTSHHHHHHHHHHHHHHHHHHHHCCSS--SEEE---SCEEETTTTCEEE---SEEEEEESSCGGSS
T ss_pred HHHHHHhcccCCCCccchHHHHHHHHHHHHHHHHHHHHhcC--ceecCcCCchhccccccccCCCCCeEEEecCCccccc
Confidence 6541 0000 1122223455555555444433210 01110 00 111111233488886532 45
Q ss_pred HHHHHHcccEEEeCC---C------eEEeccCChhhHHHHHHHHHHH
Q 012238 425 SDNMTNKWHVYMTKD---G------RISLAGLSLAKCEYLADAIIDS 462 (467)
Q Consensus 425 ~~~ll~~~gI~v~~g---g------Ris~~~~~~~~i~~~~~~l~~~ 462 (467)
|...|+++||..+.| | |||+-. ++++++.++++|...
T Consensus 317 C~~~l~~~~I~tr~G~~fga~~ryVRlSml~-~~d~Fd~l~~rL~~l 362 (363)
T PF04864_consen 317 CYAVLREAKIITRSGVLFGADSRYVRLSMLK-RDDDFDQLLERLSKL 362 (363)
T ss_dssp HHHHHHCTTEEEEEGGGGTS-TTEEEEESSS--HHHHHHHHHHHHCC
T ss_pred HHHHHHhCCcccCCCCccCCCCCeEEEeccC-CHHHHHHHHHHHHhh
Confidence 888999999999998 3 999987 889999999998754
No 280
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.62 E-value=1e-12 Score=128.92 Aligned_cols=278 Identities=18% Similarity=0.152 Sum_probs=178.6
Q ss_pred CcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHH----HHhhCCCC
Q 012238 125 IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKN----IFNDARVP 200 (467)
Q Consensus 125 ~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~----~~~~~G~~ 200 (467)
.+....|.++++++-.+ +..+. +++|+.|+..+ ++..+.+||+|+++...|..... +++..|++
T Consensus 62 nPT~~~lE~~~a~LEg~--------~~~~a--fsSGmaAI~~~--~l~ll~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~ 129 (396)
T COG0626 62 NPTRDALEEALAELEGG--------EDAFA--FSSGMAAISTA--LLALLKAGDHVLLPDDLYGGTYRLFEKILQKFGVE 129 (396)
T ss_pred CccHHHHHHHHHHhhCC--------CcEEE--ecCcHHHHHHH--HHHhcCCCCEEEecCCccchHHHHHHHHHHhcCeE
Confidence 45567888999998432 34555 79999999997 67778899999999998876544 44567887
Q ss_pred eEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCC
Q 012238 201 WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLD 280 (467)
Q Consensus 201 ~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~ 280 (467)
+.+++. -|.+.+++++.+ +++++|++-+|.|||-.+.+. .+|+++++++|+++|+|+.|....+-
T Consensus 130 ~~~~d~-------~~~~~~~~~~~~--~~tk~v~lEtPsNP~l~v~DI---~~i~~~A~~~g~~vvVDNTfatP~~q--- 194 (396)
T COG0626 130 VTFVDP-------GDDEALEAAIKE--PNTKLVFLETPSNPLLEVPDI---PAIARLAKAYGALVVVDNTFATPVLQ--- 194 (396)
T ss_pred EEEECC-------CChHHHHHHhcc--cCceEEEEeCCCCcccccccH---HHHHHHHHhcCCEEEEECCccccccc---
Confidence 777654 245566666653 589999999999999887665 47777799999999999998765542
Q ss_pred CChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhcc-CccCCCchHHHHH
Q 012238 281 NDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLAR-PMYSNPPVHGARI 359 (467)
Q Consensus 281 ~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~ 359 (467)
.+ + +. .-.|++.|.+|.++-.+-=+|.++ ++.++++.+. +..... .+....+......
T Consensus 195 -~P--L----~~-GaDIVvhSaTKyl~GHsDvl~G~v-~~~~~~~~~~------------~~~~~~~~~G~~l~p~dA~l 253 (396)
T COG0626 195 -RP--L----EL-GADIVVHSATKYLGGHSDVLGGVV-LTPNEELYEL------------LFFAQRANTGAVLSPFDAWL 253 (396)
T ss_pred -Ch--h----hc-CCCEEEEeccccccCCcceeeeEE-ecChHHHHHH------------HHHHHHhhcCCCCCHHHHHH
Confidence 11 1 12 246889999999986666566643 3455555554 322222 2333455555444
Q ss_pred HHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCccccc-----------------CCcceEEecCCCH
Q 012238 360 VANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFIL-----------------RQIGMFSFTGLNK 422 (467)
Q Consensus 360 ~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~-----------------~~~g~f~~~~l~~ 422 (467)
+..-|+. +..+.++..++...+.+.|+ +.+. --+++. ..||+|.|.=-+.
T Consensus 254 ~lRGlkT----------L~~Rm~~~~~nA~~IA~~L~-~~p~--V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~~ 320 (396)
T COG0626 254 LLRGLRT----------LALRMERHNENALKIAEFLA-DHPK--VKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELKNE 320 (396)
T ss_pred HHhccch----------HHHHHHHHHHHHHHHHHHHh-cCCC--eEEEECCCCCCCCcHHHHHHhcCCCceEEEEEeCCh
Confidence 4333322 44455556666777777776 4321 011211 2567776541121
Q ss_pred HHHHHHHHcccEEE---eCC-------------------------C------eEEeccCChhhHHHHHHHHHHHHHhc
Q 012238 423 AQSDNMTNKWHVYM---TKD-------------------------G------RISLAGLSLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 423 ~~~~~ll~~~gI~v---~~g-------------------------g------Ris~~~~~~~~i~~~~~~l~~~l~~~ 466 (467)
+.+.++++.-.++. .-| | |+|++- |+++.+++-|+++++.+
T Consensus 321 ~~~~~f~~~L~l~~~a~SlGgveSLi~~pa~~th~~~~~~~r~~~Gi~~~LvRlSVGl---Ed~eDLi~Dl~~Al~~~ 395 (396)
T COG0626 321 EAAKKFLDSLKLFKLAESLGGVESLISHPATMTHASIPLEERAKAGITDGLVRLSVGL---EDVEDLIADLEQALAKA 395 (396)
T ss_pred HHHHHHHHhCCccEEeccCCCcccccccccccCcccCCHhHHHhcCCCCCeEEEEecC---CCHHHHHHHHHHHHHhh
Confidence 55555555433322 222 1 999997 67777777888777654
No 281
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.62 E-value=5.2e-13 Score=135.02 Aligned_cols=157 Identities=18% Similarity=0.121 Sum_probs=116.0
Q ss_pred cchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchH----HHHhhCCCCe
Q 012238 126 EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHK----NIFNDARVPW 201 (467)
Q Consensus 126 ~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~----~~~~~~G~~~ 201 (467)
+-..+|++.++++... ...++ +.+|+.|+.++ ++..+.+||+|+++...|.... ..++..|+++
T Consensus 69 pt~~~le~~la~l~g~-------~~~v~---fsSG~~Ai~~a--l~~ll~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v 136 (437)
T PRK05613 69 PTVEALENRIASLEGG-------VHAVA---FASGQAAETAA--ILNLAGAGDHIVTSPRLYGGTETLFLVTLNRLGIEV 136 (437)
T ss_pred hHHHHHHHHHHHHhCC-------CeEEE---eCCHHHHHHHH--HHHhcCCCCEEEECCCccHHHHHHHHHHHHhcCeEE
Confidence 3467888999998643 23444 47777888876 5555789999999999998663 4557789998
Q ss_pred EEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCC
Q 012238 202 SEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDN 281 (467)
Q Consensus 202 ~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~ 281 (467)
+.++. + .|++.+++.++ ++++++++.++.||+|.+.+.+ +|+++|+++|+++|+|.++..... .
T Consensus 137 ~~vd~--~----~d~e~l~~~l~---~~tk~V~~e~~~Np~~~v~di~---~I~~la~~~gi~livD~t~a~g~~----~ 200 (437)
T PRK05613 137 TFVEN--P----DDPESWQAAVQ---PNTKAFFGETFANPQADVLDIP---AVAEVAHRNQVPLIVDNTIATAAL----V 200 (437)
T ss_pred EEECC--C----CCHHHHHHhCC---ccCeEEEEECCCCCCCcccCHH---HHHHHHHHcCCeEEEECCCccccc----c
Confidence 88862 2 27899999887 5677888889999999888765 666779999999999999533211 1
Q ss_pred ChhHHHHHHhcCCeEEEEecCccCcccCCCccceEE
Q 012238 282 DASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMN 317 (467)
Q Consensus 282 ~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~ 317 (467)
. +. +.+ -.+++.|++|.++..|.-+|.++
T Consensus 201 ~--p~----~~G-aDivv~S~~K~l~G~gd~~gG~v 229 (437)
T PRK05613 201 R--PL----ELG-ADVVVASLTKFYTGNGSGLGGVL 229 (437)
T ss_pred C--hH----HhC-CCEEEeeccceecCCCcceeEEE
Confidence 1 11 122 36889999999987777777775
No 282
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.61 E-value=1.4e-12 Score=133.25 Aligned_cols=338 Identities=15% Similarity=0.112 Sum_probs=189.1
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCch
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (467)
+.+.||+..|.....-|. -.|.|.+++.+.++......+ +. +....+|+.+..... . -+.+.+ +++|+
T Consensus 98 G~~yiD~~~g~g~~~lGh--~~p~v~~av~~ql~~~~~~~~-~~----~~~~~lAe~l~~~~p-~--~~~v~f--~~SGs 165 (474)
T PLN02482 98 GNEYIDYVGSWGPAIIGH--ADDEVLAALAETMKKGTSFGA-PC----LLENVLAEMVIDAVP-S--VEMVRF--VNSGT 165 (474)
T ss_pred CCEEEEecccccccccCC--CCHHHHHHHHHHHhhCCCCCC-CC----HHHHHHHHHHHHhCC-C--CCEEEE--eCChH
Confidence 357889877753122232 367888888888865432222 33 233344555433221 1 358888 99999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHh-h--CCCC------eEEeeeec-CCC---CCCChhhHHHHHHcCCC
Q 012238 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-D--ARVP------WSEYRYYD-PKT---VGLDFEGMIADIKAAPG 228 (467)
Q Consensus 162 ~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~-~--~G~~------~~~v~~~~-~~~---~~~d~~~l~~~l~~~~~ 228 (467)
+|...+.++........+|+...-+|.++...+- . .|.. ...+|... +.. .-.|++.+++.+++.+.
T Consensus 166 EA~e~AlklAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~nd~~~l~~~l~~~~~ 245 (474)
T PLN02482 166 EACMGVLRLARAYTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPYNDLEAVKKLFEANKG 245 (474)
T ss_pred HHHHHHHHHHHHhcCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecCCChHHHHHHHHhCCC
Confidence 9999986665444444689988888877543211 0 0000 00000000 000 00278899988876545
Q ss_pred CcEEEEeCCCCCCCCCCCC-HHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcc
Q 012238 229 GSFILLHGCAHNPTGIDPT-PEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG 307 (467)
Q Consensus 229 ~~~~i~i~~p~NPTG~~~~-~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 307 (467)
...++++-....-.|.+.+ .+.|++|.++|++||+++|+||+..++..+. .... ....-.+++ .+|+|.+|
T Consensus 246 ~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGfR~g~----~ga~-~~~gv~PDi---~t~gK~lg 317 (474)
T PLN02482 246 EIAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGFRIAY----GGAQ-EYFGITPDL---TTLGKVIG 317 (474)
T ss_pred ceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCeecCc----chHh-HHhCCCCCE---EEecchhh
Confidence 5666666666666676654 6889999999999999999999987774331 1111 112222343 36799998
Q ss_pred cCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhc---cCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q 012238 308 LYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLA---RPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRI 384 (467)
Q Consensus 308 ~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~ 384 (467)
.|+.+|.+. +.+++++. +.... ...+.+.+.++..++...|+. + ++ +...+++
T Consensus 318 -gG~Pigav~---g~~ei~~~------------~~~~~~~~~~~T~~gnpl~~aAala~L~~--l----~~--~~~~~~~ 373 (474)
T PLN02482 318 -GGLPVGAYG---GRREIMEM------------VAPAGPMYQAGTLSGNPLAMTAGIHTLKR--L----QQ--PGTYEYL 373 (474)
T ss_pred -CCCceEEEE---EcHHHHHh------------hccCCCcccccCcchhHHHHHHHHHHHHH--H----hc--cCHHHHH
Confidence 889999994 77887776 43111 111222344444444444321 0 00 1233334
Q ss_pred HHHHHHHHHHhhhccCCCCCcccc-cCCcceE-Eec--C-C---------CH----HHHHHHHHcccEEEeCCC----eE
Q 012238 385 KNVRQKLFDSLSAKDKSGKDWSFI-LRQIGMF-SFT--G-L---------NK----AQSDNMTNKWHVYMTKDG----RI 442 (467)
Q Consensus 385 ~~~r~~l~~~l~~~~g~~~~~~~~-~~~~g~f-~~~--~-l---------~~----~~~~~ll~~~gI~v~~gg----Ri 442 (467)
.++-++|.+.|+ ++.....+... ...++++ +.+ + . +. .+.+.+++ +||++.+.+ .+
T Consensus 374 ~~~g~~l~~~L~-~l~~~~g~~~~~~~v~g~~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~l~~-~Gv~~~~~~~~~~~p 451 (474)
T PLN02482 374 DKITKKLIQGIL-EAGKKAGHEMCGGYISGMFGFFFTEGPVYNFADAKKSDTAKFARFHRGMLE-EGVYLAPSQFEAGFT 451 (474)
T ss_pred HHHHHHHHHHHH-HHHHhcCCCEEEcccceEEEEEEecCCccChhhhccCCHHHHHHHHHHHHH-CCeEEeccCCCCCcC
Confidence 444444444444 32110001222 2223444 111 1 0 11 23455555 699998864 25
Q ss_pred EeccCChhhHHHHHHHHHHHHHhc
Q 012238 443 SLAGLSLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 443 s~~~~~~~~i~~~~~~l~~~l~~~ 466 (467)
++.. ++++++++++++.++++++
T Consensus 452 sl~h-t~~dId~~l~al~~~l~~~ 474 (474)
T PLN02482 452 SLAH-TEEDIDFTIAAAERVLARI 474 (474)
T ss_pred CCCC-CHHHHHHHHHHHHHHHHhC
Confidence 5555 8999999999999998764
No 283
>PRK04311 selenocysteine synthase; Provisional
Probab=99.61 E-value=8.6e-13 Score=133.92 Aligned_cols=342 Identities=16% Similarity=0.089 Sum_probs=197.9
Q ss_pred CcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCC-----cchHHHHHHHHHHHhCCCCcccccCceeeeecC
Q 012238 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPI-----EGLAAFNKVTAELLFGADNSVLKEQRVATVQGL 158 (467)
Q Consensus 84 ~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~-----~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ 158 (467)
.+||.+--.++++.+.++.++.+.+++.+.+.......|.-. .-+..+++.++++.+. +..++ ++
T Consensus 80 ~vinatg~v~~tNlg~s~l~~~v~eav~~~~~~~~~le~~l~~g~~g~r~~~~e~~lA~l~Ga--------e~a~v--v~ 149 (464)
T PRK04311 80 PVINATGVVLHTNLGRALLSEAAIEAVTEAARGYSNLEYDLATGKRGSRDRALAALLCALTGA--------EDALV--VN 149 (464)
T ss_pred ceecCCccEEeccCCCCCCCHHHHHHHHHHHhcccccccchhhcccchHHHHHHHHHHHHhCC--------CeEEE--EC
Confidence 688877555666667677789999999888754322233211 1246888999998643 24555 78
Q ss_pred CchhHHHHHHHHHHHhCCCCEEEEcCCCCcc------hHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEE
Q 012238 159 SGTGSLRLAAALIERYFPGAKVLISSPTWGN------HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFI 232 (467)
Q Consensus 159 ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~------~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~ 232 (467)
+++.|+.++ +..+.+||+|+++...+.. +...++..|+++++++.. ...++++++++++ +++++
T Consensus 150 sgtaAl~l~---l~~l~~GdeVIvs~~e~~~~ggs~~i~~~~~~~G~~l~~v~~~----~~t~~~dle~aI~---~~Tkl 219 (464)
T PRK04311 150 NNAAAVLLA---LNALAAGKEVIVSRGELVEIGGAFRIPDVMRQAGARLVEVGTT----NRTHLRDYEQAIN---ENTAL 219 (464)
T ss_pred CHHHHHHHH---HHHhCCCCEEEEcchhhhhcCcchhhHHHHHHCCcEEEEECCC----CCCCHHHHHHhcC---ccCeE
Confidence 899999886 4557899999999764331 234567889999998763 2357889999887 57889
Q ss_pred EEeCCCCCCC--CCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCC----CCCCCCChhHHHHHHhcCCeEEEEecCccCc
Q 012238 233 LLHGCAHNPT--GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFA----SGSLDNDASSVRLFATRGMELLVAQSYSKNL 306 (467)
Q Consensus 233 i~i~~p~NPT--G~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~ 306 (467)
+++.++.||+ |... ..++++|+++|++||+++|+|.....+. ++-. ..+.+....+. .-.++++|.+|.+
T Consensus 220 V~~vh~sN~~i~G~~~-~~dl~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~--~~p~~~~~l~~-GaDiv~fSg~K~L 295 (464)
T PRK04311 220 LLKVHTSNYRIEGFTK-EVSLAELAALGKEHGLPVVYDLGSGSLVDLSQYGLP--DEPTVQELLAA-GVDLVTFSGDKLL 295 (464)
T ss_pred EEEEcCCCccccccCC-cCCHHHHHHHHHHcCCeEEEECCCcccccchhccCC--CCCchhhHHhc-CCcEEEecCcccc
Confidence 9999999994 4321 2346788888999999999999632221 1100 01112122223 2458899999998
Q ss_pred ccCCCccceEEEecCCHHHHhhhhhhhHHHHHH-HHHhhccCccCCCchHHHHHHHHHhCChhhHHH--HHHHHHHHHHH
Q 012238 307 GLYAERIGAMNVVCSSSDLAARCCEVAVIQVKS-QLKRLARPMYSNPPVHGARIVANVVGNPALFDE--WKAEMEMMAGR 383 (467)
Q Consensus 307 ~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~--~~~~l~~~~~~ 383 (467)
|-| ..|+++ +.+++++. ++. .+.+..+..-.....+. ......++....... -.+-+....++
T Consensus 296 gGp--~~G~i~---g~~~li~~--------l~~~~~~r~lr~dk~~l~~l~-~~l~~~~~~~~~~~~i~~l~~l~~~~~~ 361 (464)
T PRK04311 296 GGP--QAGIIV---GKKELIAR--------LKKHPLKRALRVDKLTLAALE-ATLRLYLDPEKLAEEIPTLRLLTRSPEE 361 (464)
T ss_pred cCC--ceEEEE---EcHHHHHH--------HhhchhHHHHhcchHHHHHHH-HHHHHHhChhhhhhhCcHHHHhcCCHHH
Confidence 745 368774 67777776 221 11111111011111111 111112211100000 00113333455
Q ss_pred HHHHHHHHHHHhhhccCCCC-CcccccC----Ccc------e---EEec---CCCHHHHHHHHHccc--EEEeCC-C--e
Q 012238 384 IKNVRQKLFDSLSAKDKSGK-DWSFILR----QIG------M---FSFT---GLNKAQSDNMTNKWH--VYMTKD-G--R 441 (467)
Q Consensus 384 ~~~~r~~l~~~l~~~~g~~~-~~~~~~~----~~g------~---f~~~---~l~~~~~~~ll~~~g--I~v~~g-g--R 441 (467)
+.++.+.+.+.|+ ....++ ...+... .|| + -+-+ +++.+.+.+.|++.. |+.+-. | .
T Consensus 362 ~~~~A~~la~~L~-~~~~~~~~~~~~~~~~~~gggs~p~~~~~~~~v~~~~~~~~~~~l~~~lr~~~~~i~~r~~~~~~~ 440 (464)
T PRK04311 362 LRARAERLAAALK-AALGAAFAVEVVPSFSQVGGGSLPVDRLPSAAVTLTPKDRSLEALAARLRLLPPPVIGRIEDGRLL 440 (464)
T ss_pred HHHHHHHHHHHHH-hccCCCeeEEEEEccCccCCCCCcCCCCCeEEEEEeCCCCCHHHHHHHHhcCCCCEEEEEECCEEE
Confidence 6666777777776 432111 0122211 111 1 1111 235566666666633 444322 3 4
Q ss_pred EEeccCChhhHHHHHHHHHHHHH
Q 012238 442 ISLAGLSLAKCEYLADAIIDSYH 464 (467)
Q Consensus 442 is~~~~~~~~i~~~~~~l~~~l~ 464 (467)
|.+.++.+++++.++++|++++.
T Consensus 441 ld~r~~~~~~~~~~~~~~~~~~~ 463 (464)
T PRK04311 441 LDLRTLEEEDEERLAAALLEALN 463 (464)
T ss_pred EEeCcCCHHHHHHHHHHHHHHhh
Confidence 55667788999999999998864
No 284
>PRK06541 hypothetical protein; Provisional
Probab=99.61 E-value=1.1e-12 Score=134.11 Aligned_cols=340 Identities=12% Similarity=0.070 Sum_probs=192.6
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCC---CCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecC
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE---NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGL 158 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~---~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ 158 (467)
+.+.||+..|..-..-|. -.|.|.+++.+.+.... ...| ......++-+.+++.... .-+++.+ ++
T Consensus 51 G~~ylD~~~g~~~~~lGh--~~p~v~~Av~~q~~~~~~~~~~~~-~~~~~~~la~~l~~~~p~------~~~~v~f--~~ 119 (460)
T PRK06541 51 GKRYLDGLAGLFVVQVGH--GRAELAEAAAKQAGTLAFFPLWSY-AHPPAIELAERLAALAPG------DLNRVFF--TT 119 (460)
T ss_pred CCEEEECCccHHhccCCC--CCHHHHHHHHHHHhhCcCcccccc-CCHHHHHHHHHHHHhCCC------CcCEEEE--cC
Confidence 457899988743122233 36788888888775421 0122 222223344444443211 1258888 99
Q ss_pred CchhHHHHHHHHHHHhC-----C-CCEEEEcCCCCcchHHHHh-hCCC------------CeEEeeeecCCC---CCCC-
Q 012238 159 SGTGSLRLAAALIERYF-----P-GAKVLISSPTWGNHKNIFN-DARV------------PWSEYRYYDPKT---VGLD- 215 (467)
Q Consensus 159 ggt~al~l~~~~l~~~~-----~-gd~Vlv~~P~y~~~~~~~~-~~G~------------~~~~v~~~~~~~---~~~d- 215 (467)
+|++|.+.+.++..... + ..+|+...-+|.+...... ..|. .+..+|..+... ++.+
T Consensus 120 sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 199 (460)
T PRK06541 120 GGSEAVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDP 199 (460)
T ss_pred CcHHHHHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCccccccccCCCH
Confidence 99999999866544431 1 3578888888865543221 1111 122222210000 1122
Q ss_pred -------hhhHHHHHHcC-CCCcEEEEeCCCCCCCCCCCC-HHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHH
Q 012238 216 -------FEGMIADIKAA-PGGSFILLHGCAHNPTGIDPT-PEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSV 286 (467)
Q Consensus 216 -------~~~l~~~l~~~-~~~~~~i~i~~p~NPTG~~~~-~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~ 286 (467)
++.+++.++.. +....++++...++++|.+.+ .+.+++|.++|++||+++|+||++.+|.-.+ ..+..
T Consensus 200 ~~~~~~~~~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G---~~~a~ 276 (460)
T PRK06541 200 EAFGRWAADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLG---EMFGC 276 (460)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCc---hhhhh
Confidence 25677777642 234455555555899999865 8889999999999999999999998874211 11111
Q ss_pred HHHHhcCCeEEEEecCccCcccCCC-ccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhc----cCccCCCchHHHHHHH
Q 012238 287 RLFATRGMELLVAQSYSKNLGLYAE-RIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLA----RPMYSNPPVHGARIVA 361 (467)
Q Consensus 287 ~~~~~~~~~~i~~~S~SK~~~~~G~-RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~----~~~~~~~~~~~~~~~~ 361 (467)
.. ..-.++++ .|+|.++ .|+ ++|+++ .++++++. +.... ...+.+.+.++..++.
T Consensus 277 ~~-~gv~PDiv---t~gK~l~-~G~~pigav~---~~~~i~~~------------~~~~~~~~~~~~T~~gnp~~~aaal 336 (460)
T PRK06541 277 ER-FGYVPDII---TCAKGIT-SGYSPLGAMI---ASDRLFEP------------FLDGPTMFLHGYTFGGHPVSAAVAL 336 (460)
T ss_pred hh-cCCCCCEE---Eeccccc-CCccceeEEE---EcHHHHHH------------hhcCCCccccCCCCCCCHHHHHHHH
Confidence 11 12123433 4899999 887 999995 67777665 32211 1112234445545554
Q ss_pred HHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC-CCCCcccccCCcceEEec--C-------CCH---------
Q 012238 362 NVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK-SGKDWSFILRQIGMFSFT--G-------LNK--------- 422 (467)
Q Consensus 362 ~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g-~~~~~~~~~~~~g~f~~~--~-------l~~--------- 422 (467)
..|+. + + -+...++++++.++|.+.|+ ++. .|. +..+...|.++.+- . ++.
T Consensus 337 a~l~~--l----~--~~~~~~~~~~~g~~l~~~L~-~l~~~~~-v~~vrg~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~ 406 (460)
T PRK06541 337 ANLDI--F----E--REGLLDHVRDNEPAFRATLE-KLLDLPI-VGDVRGDGYFYGIELVKDKATKETFTDDESERLLRG 406 (460)
T ss_pred HHHHH--H----H--hccHHHHHHHHHHHHHHHHH-HhhcCCC-eEEEEecceEEEEEEecCcccccCCcchhhhhhHHH
Confidence 44321 1 1 11345677777888888887 552 110 12234455544221 1 000
Q ss_pred HHHHHHHHcccEEEeCC--C----eEEec-cCChhhHHHHHHHHHHHHHhc
Q 012238 423 AQSDNMTNKWHVYMTKD--G----RISLA-GLSLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 423 ~~~~~ll~~~gI~v~~g--g----Ris~~-~~~~~~i~~~~~~l~~~l~~~ 466 (467)
.+...+++ +||++.+. | ||+.. .++++++++++++|.++++++
T Consensus 407 ~~~~~l~~-~Gi~~~~~~~g~~~lrl~Ppl~~t~~~id~~~~~l~~~l~~~ 456 (460)
T PRK06541 407 FLSPALFE-AGLYCRADDRGDPVVQLAPPLISGQEEFDEIEQILRSVLTEA 456 (460)
T ss_pred HHHHHHHh-CCeEEEecCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 12345554 69999763 3 67755 248899999999999998754
No 285
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.61 E-value=3.6e-13 Score=133.60 Aligned_cols=318 Identities=13% Similarity=0.015 Sum_probs=191.4
Q ss_pred CCCCchHHHHHHHHHHHhcC----C----CCcCCC--CcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHH
Q 012238 98 LQPYVLDVVKKAENLMLERG----E----NKEYLP--IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLA 167 (467)
Q Consensus 98 ~~p~~~~~v~~a~~~~~~~~----~----~~~Y~~--~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~ 167 (467)
+...+++.|++++...+.+- . .....+ ..-..+.++.++++++... ..++++ .+.+|+++++.+
T Consensus 10 GP~~~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~-----~~~v~~-~~gsgt~~~Ea~ 83 (360)
T PRK05355 10 GPAMLPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELLNIPD-----NYKVLF-LQGGASLQFAMV 83 (360)
T ss_pred CCCCCCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCC-----CcEEEE-EcCCchHHHHHH
Confidence 33446899999988765210 0 011111 1335677777888765311 234544 168889999987
Q ss_pred HHHHHHhCCCCEEEEcCCCCc--chHHHHhhCCCCeEEeeeecCCCCCCChhhHHH-HHHcCCCCcEEEEeCCCCCCCCC
Q 012238 168 AALIERYFPGAKVLISSPTWG--NHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIA-DIKAAPGGSFILLHGCAHNPTGI 244 (467)
Q Consensus 168 ~~~l~~~~~gd~Vlv~~P~y~--~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~-~l~~~~~~~~~i~i~~p~NPTG~ 244 (467)
+...+.+||++++..-+.. .+.++++.+|.. ..+...+..+ ..+..++++ .++ ++++++.+++..|.||+
T Consensus 84 --~~nl~~~g~~~l~i~~G~fg~r~~~~a~~~g~~-~~~~~~~~~g-~~~~~~~~~~~l~---~~~~~V~~th~eTstGv 156 (360)
T PRK05355 84 --PMNLLGGGKKADYVDTGSWSKKAIKEAKKYGEV-NVAASSEDDG-FTYIPPLDEWQLS---DDAAYVHYTSNETIDGT 156 (360)
T ss_pred --HHhcCCCCCeEEEEECCHHHHHHHHHHHHhCCc-eEEecccccC-CCCCCChhhccCC---CCCCEEEEccCCCcceE
Confidence 6667779999888876664 346678888965 5555432122 344444444 565 35678888999999999
Q ss_pred CCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecCCHH
Q 012238 245 DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSD 324 (467)
Q Consensus 245 ~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~ 324 (467)
..+ ++.+| +|+++|+|.+ +.+.....+.+ +. + +++.|..|.+|++|+ |.++ .+++
T Consensus 157 ~~~--~i~~i------~g~l~vVDav-ss~g~~~idv~--------~~-d--~~~~ssqK~lgP~Gl--g~l~---~s~~ 211 (360)
T PRK05355 157 EFH--ELPDT------GDVPLVADMS-SDILSRPIDVS--------KF-G--LIYAGAQKNIGPAGL--TIVI---VRED 211 (360)
T ss_pred ecC--ccccc------CCCcEEEEcC-ccccCccCCHH--------Hc-c--EEEEeccccccCCce--EEEE---ECHH
Confidence 984 24444 8999999999 55544322211 11 2 778888899998884 7775 5566
Q ss_pred HHhhhhh--hhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHH-HHHHHHHHHHHHHHHHHHHhhhccCC
Q 012238 325 LAARCCE--VAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKA-EMEMMAGRIKNVRQKLFDSLSAKDKS 401 (467)
Q Consensus 325 ~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~-~l~~~~~~~~~~r~~l~~~l~~~~g~ 401 (467)
.+++..+ +.+.++....... .....++.....++..+|+.- .+. .++++.++.++..+++++.|+ ++++
T Consensus 212 ~l~~~~~~~~~~~~~~~~~~~~--~~~~Tp~~~~i~aL~~aL~~i-----~~~gG~e~i~~r~~~l~~~l~~~l~-~~~~ 283 (360)
T PRK05355 212 LLGRALPSIPSMLDYKTHADND--SMYNTPPTFAIYLAGLVFKWL-----KEQGGVAAMEKRNQEKAALLYDAID-SSDF 283 (360)
T ss_pred HHhhcccCCChHHHHHHHHhcC--CccCCCcHHHHHHHHHHHHHH-----HHccCHHHHHHHHHHHHHHHHHHHH-hCCC
Confidence 6654111 1233333212111 122344544444444444311 123 377899999999999999999 8874
Q ss_pred CCCcccccC---Cc-ceEEec--CC-C-HHHHHHHHHcccEEEeCC----C--eEEeccC-ChhhHHHHHHHHHHHHHh
Q 012238 402 GKDWSFILR---QI-GMFSFT--GL-N-KAQSDNMTNKWHVYMTKD----G--RISLAGL-SLAKCEYLADAIIDSYHN 465 (467)
Q Consensus 402 ~~~~~~~~~---~~-g~f~~~--~l-~-~~~~~~ll~~~gI~v~~g----g--Ris~~~~-~~~~i~~~~~~l~~~l~~ 465 (467)
+....+ .. ....+. +. . .++...+. ++|+.+.++ | |+|+... +.+++++++++|++++++
T Consensus 284 ---~~~~~~~~~rs~~v~sf~~~~~~~~~~~~~~~~-~~Gi~~~~~~~~~g~vRiS~~~~nt~eei~~l~~~l~~~~~~ 358 (360)
T PRK05355 284 ---YRNPVAPEDRSRMNVPFTLADEELDKKFLAEAK-AAGLVGLKGHRSVGGMRASIYNAMPLEGVQALVDFMKEFERR 358 (360)
T ss_pred ---cccCCChhhcCCcEEEEEcCChHHHHHHHHHHH-HCCCcccCCCCccCcEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 111111 12 222222 21 2 23334444 469988665 3 9997654 679999999999998764
No 286
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.61 E-value=1e-12 Score=120.59 Aligned_cols=314 Identities=14% Similarity=0.125 Sum_probs=196.8
Q ss_pred chHHHHHHHHHHHhcCCCCcCCCC---cchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCC
Q 012238 102 VLDVVKKAENLMLERGENKEYLPI---EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGA 178 (467)
Q Consensus 102 ~~~~v~~a~~~~~~~~~~~~Y~~~---~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd 178 (467)
.++.|.+|+..-. .+|..+ +-..++++-+...+.... +.-.++ ...|+.+.+.+ +...+.|||
T Consensus 28 l~~~V~~A~~~~~-----lgh~sPe~~qIm~~v~egikyVFkT~n-----~~tf~i--sgsGh~g~E~a--l~N~lePgd 93 (385)
T KOG2862|consen 28 LSGRVQEAMSRPS-----LGHMSPEFVQIMDEVLEGIKYVFKTAN-----AQTFVI--SGSGHSGWEAA--LVNLLEPGD 93 (385)
T ss_pred CCHHHHHhhcCCc-----cccCCHHHHHHHHHHHHHHHHHhccCC-----CceEEE--ecCCcchHHHH--HHhhcCCCC
Confidence 4677777764422 333322 123445555544433332 234555 67888889987 667788999
Q ss_pred EEEEcC-CCCc-chHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHH
Q 012238 179 KVLISS-PTWG-NHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIAD 256 (467)
Q Consensus 179 ~Vlv~~-P~y~-~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~ 256 (467)
+|++.. -.|. .+.++.+.+|+++..++. +.+....++++.+.+.+ .+.+++++++....||+..+. ++.+-+
T Consensus 94 ~vLv~~~G~wg~ra~D~~~r~ga~V~~v~~--~~G~~~~le~i~~~lsq--h~p~~vfv~hgdsSTgV~q~~--~~~~g~ 167 (385)
T KOG2862|consen 94 NVLVVSTGTWGQRAADCARRYGAEVDVVEA--DIGQAVPLEEITEKLSQ--HKPKAVFVTHGDSSTGVLQDL--LAISGE 167 (385)
T ss_pred eEEEEEechHHHHHHHHHHhhCceeeEEec--CcccCccHHHHHHHHHh--cCCceEEEEecCccccccchH--HHHHHH
Confidence 988876 4553 567889999999999976 55678999999999997 566788888888999997762 344555
Q ss_pred HHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCccc-CCCccceEEEecCCHHHHhhhhhhhHH
Q 012238 257 VIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGL-YAERIGAMNVVCSSSDLAARCCEVAVI 335 (467)
Q Consensus 257 ~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~-~G~RiG~~~~v~~~~~~~~~~~~~~~~ 335 (467)
+|++|+.++++|.+ ..+.-.+...|.| +-++.+.+| -|.++. +|+ +-+ +.++...++
T Consensus 168 lc~k~~~lllVD~V-aSlggt~F~mDew--------gVDvaytgS-QKaL~aP~GL--sii---sfS~ka~~~------- 225 (385)
T KOG2862|consen 168 LCHKHEALLLVDTV-ASLGGTEFEMDEW--------GVDVAYTGS-QKALGAPAGL--SII---SFSDKALEA------- 225 (385)
T ss_pred HhhcCCeEEEEech-hhcCCccceehhh--------cccEEEecc-hhhcCCCCCc--cee---ecCHHHHHH-------
Confidence 69999999999999 4444333334444 335666666 566664 454 334 566665555
Q ss_pred HHHHHHH----------hhccC--------ccC-CCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 012238 336 QVKSQLK----------RLARP--------MYS-NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLS 396 (467)
Q Consensus 336 ~~~~~l~----------~~~~~--------~~~-~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~ 396 (467)
+++.-. .+... .|- .+|.........+| ....++.+++..++.+++.+.+...|+
T Consensus 226 -~~~rK~~~~~~yFd~~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL-----~~I~eeGL~~~~~rH~e~s~~l~~~l~ 299 (385)
T KOG2862|consen 226 -IRDRKTKPVSFYFDILRLGNFWGCDGEPRAYHHTPPVQLLYSLRAAL-----ALIAEEGLENSWRRHREMSKWLKLSLE 299 (385)
T ss_pred -HhhccCCceEEEEeHHhhcchhccCCcccccccCCcHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222110 00000 111 23333333333333 223356789999999999999999999
Q ss_pred hccCCCCCccc----c-cCCcceEEecCCCHHH-HHHHHHcccEEEeCC-----C---eEEecc--CChhhHHHHHHHHH
Q 012238 397 AKDKSGKDWSF----I-LRQIGMFSFTGLNKAQ-SDNMTNKWHVYMTKD-----G---RISLAG--LSLAKCEYLADAII 460 (467)
Q Consensus 397 ~~~g~~~~~~~----~-~~~~g~f~~~~l~~~~-~~~ll~~~gI~v~~g-----g---Ris~~~--~~~~~i~~~~~~l~ 460 (467)
++|+.- +.. . +.-.+.-+-.+.++.. +.++..++++.+..| | ||.+-+ -+.+.++..++.|+
T Consensus 300 -~~GLq~-fv~~e~~rlptvttv~vp~gvDw~dVv~~~~~~~~vei~gglg~~~gKv~RIGl~gcna~~e~i~~v~~ll~ 377 (385)
T KOG2862|consen 300 -ALGLQL-FVVDEELRLPTVTTVKVPYGVDWKDVVAYAMSHYVVEIGGGLGPTVGKVFRIGLLGCNANVEYIDNVVELLK 377 (385)
T ss_pred -HhCccc-eecChhhccCcceeeecCCCCCHHHHHHHHHHhcCEEeccccCCCcccEEEEEEeeccCCcHHHHHHHHHHH
Confidence 888621 111 0 1112222223557654 777887767776554 2 998532 25588999999999
Q ss_pred HHHHh
Q 012238 461 DSYHN 465 (467)
Q Consensus 461 ~~l~~ 465 (467)
.++.+
T Consensus 378 ~alq~ 382 (385)
T KOG2862|consen 378 LALQR 382 (385)
T ss_pred HHHhh
Confidence 88865
No 287
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.61 E-value=2.8e-13 Score=135.65 Aligned_cols=324 Identities=13% Similarity=0.051 Sum_probs=185.7
Q ss_pred CCcEEecCcccCCCCCCCCchHH-HHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeec-CCc
Q 012238 83 EKKLNLGVGAYRTEELQPYVLDV-VKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQG-LSG 160 (467)
Q Consensus 83 ~~~i~l~~G~~~d~~~~p~~~~~-v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t-~gg 160 (467)
|..++|..|- .+ +++. |++++........+....-..-..+.|+.++++++... +++|++ + .+|
T Consensus 11 ~~~~~f~~Gp------~~-~~~~~v~~a~~~~~~~~~hr~~~f~~~~~~~r~~l~~l~~~~~-----~~~v~~--~~gs~ 76 (378)
T PRK03080 11 PADPRFSSGP------CK-KRPGWQLEALADALLGRSHRQKPVKALLKRVIEGTRELLSLPE-----GYEVGI--VPGSD 76 (378)
T ss_pred CCCCCcCCCC------cC-CChHHHHHHHHhhhcccCcCCHHHHHHHHHHHHHHHHHhCCCC-----CceEEE--ECCch
Confidence 3455666552 22 2455 88888765432111111113446788888998876431 457877 6 489
Q ss_pred hhHHHHHHHHHHHhCC-CCEEEEcCCCCcc-hHH-HHhhCCC-CeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeC
Q 012238 161 TGSLRLAAALIERYFP-GAKVLISSPTWGN-HKN-IFNDARV-PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHG 236 (467)
Q Consensus 161 t~al~l~~~~l~~~~~-gd~Vlv~~P~y~~-~~~-~~~~~G~-~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~ 236 (467)
|++++.+ +...+.+ ++.|++ +-.|+. +.. +.+..|+ +++.++. +.+..+|++.+ + . ++++.++
T Consensus 77 T~~~~~~--~~~l~~~~~~~vi~-~g~f~~~~~~~~~~~~g~~~v~~~~~--~~g~~~d~~~i----~---~-~~~V~~~ 143 (378)
T PRK03080 77 TGAWEMA--LWSLLGARRVDHLA-WESFGSKWATDVVKQLKLEDPRVLEA--DYGSLPDLSAV----D---F-DRDVVFT 143 (378)
T ss_pred HHHHHHH--HHhcCCCCcceEEE-eCHHHHHHHHHHHhhcCCCCceEecc--CCCCCCCHhhc----C---C-CCCEEEE
Confidence 9999997 3434543 344444 444432 333 2366798 8888877 34456776653 2 1 3357778
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcc-cCCCccce
Q 012238 237 CAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG-LYAERIGA 315 (467)
Q Consensus 237 ~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~-~~G~RiG~ 315 (467)
+.+|.||..++.+ +|++ +++|+++|+|.+ +.+..... +.. . -.+++.|..|.++ ++| +|+
T Consensus 144 h~~t~tG~~~pi~---~I~~--~~~g~~~vVDa~-qs~G~~pi--dv~---~------iD~~~~s~~K~l~~P~G--~g~ 204 (378)
T PRK03080 144 WNGTTTGVRVPVA---RWIG--ADREGLTICDAT-SAAFALPL--DWS---K------LDVYTFSWQKVLGGEGG--HGM 204 (378)
T ss_pred ecCCccceeccch---hhcc--ccCCCeEEEecc-cccccCCC--CHH---H------CcEEEEehhhhCCCCCc--eEE
Confidence 8999999999966 5555 678999999998 55554322 211 1 1477888889885 467 577
Q ss_pred EEEecCCHHHHhhhhhhh--------HHHHHH---HHHhhccCccCC-CchHHHHHHHHHhCChhhHHHHHH-HHHHHHH
Q 012238 316 MNVVCSSSDLAARCCEVA--------VIQVKS---QLKRLARPMYSN-PPVHGARIVANVVGNPALFDEWKA-EMEMMAG 382 (467)
Q Consensus 316 ~~~v~~~~~~~~~~~~~~--------~~~~~~---~l~~~~~~~~~~-~~~~~~~~~~~~L~~~~~~~~~~~-~l~~~~~ 382 (467)
++ .+++.+++ +++. +.++.. .+.......+.+ ++..+..++..+|+ +.. +. .++++.+
T Consensus 205 l~---v~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~---~l~--~~gG~e~i~~ 275 (378)
T PRK03080 205 AI---LSPRAVER-LESYTPARPIPKFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQLD---WAN--SIGGLDALIA 275 (378)
T ss_pred EE---ECHHHHHh-hhcccCCCCCchhheeccchHHhhhhhcCCcccCchHHHHHHHHHHHH---HHH--HcCCHHHHHH
Confidence 75 45666654 1110 100011 011111111222 22222222222221 111 12 3677888
Q ss_pred HHHHHHHHHHHHhhhccCCCCCccccc--C--Cc-ceEEec--C----CCHHHHHHHHHcccEEEeCC------C--eEE
Q 012238 383 RIKNVRQKLFDSLSAKDKSGKDWSFIL--R--QI-GMFSFT--G----LNKAQSDNMTNKWHVYMTKD------G--RIS 443 (467)
Q Consensus 383 ~~~~~r~~l~~~l~~~~g~~~~~~~~~--~--~~-g~f~~~--~----l~~~~~~~ll~~~gI~v~~g------g--Ris 443 (467)
+.+++.+++++.|+ +++. +.... + .+ +...+. + .+.++..+++++ ||.+..| + |||
T Consensus 276 r~~~l~~~l~~~l~-~~~~---~~~~~~~~~~~s~~i~~~~~~~~~~~~~~~~~~~l~~~-~i~v~~g~~~~~~~~vRis 350 (378)
T PRK03080 276 RTAANASVLYDWAE-KTPW---ATPLVADPATRSNTSVTLDFVDAQAAVDAAAVAKLLRE-NGAVDIEPYRDAPNGLRIW 350 (378)
T ss_pred HHHHHHHHHHHHHH-hCCC---cccccCCccccCccEEEEEcCCchHHHHHHHHHHHHHc-CCeeccccccCCCCcEEEe
Confidence 88889999999998 7762 22221 1 12 333331 2 233456666665 7777543 2 999
Q ss_pred eccC-ChhhHHHHHHHHHHHHHhc
Q 012238 444 LAGL-SLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 444 ~~~~-~~~~i~~~~~~l~~~l~~~ 466 (467)
+... +++++++++++|+++++++
T Consensus 351 ~~~~~t~~di~~l~~al~~~~~~~ 374 (378)
T PRK03080 351 CGPTVEPADVEALTPWLDWAFERL 374 (378)
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHH
Confidence 7654 6699999999999988764
No 288
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.61 E-value=7.2e-13 Score=131.76 Aligned_cols=212 Identities=14% Similarity=0.134 Sum_probs=135.7
Q ss_pred CcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchH----HHHhhCCCC
Q 012238 125 IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHK----NIFNDARVP 200 (467)
Q Consensus 125 ~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~----~~~~~~G~~ 200 (467)
.+...+|.+.++++... +..++ +++|+.|++++ +++.+.+||+|+++.+.|.... ..+...|++
T Consensus 63 ~P~~~~lE~~la~leg~--------~~av~--~sSG~aAi~~a--l~all~~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~ 130 (384)
T PRK06434 63 NPTVQAFEEKYAVLENA--------EHALS--FSSGMGAITSA--ILSLIKKGKRILSISDLYGQTFYFFNKVLKTLGIH 130 (384)
T ss_pred ChhHHHHHHHHHHHhCC--------CcEEE--eCCHHHHHHHH--HHHHhCCCCEEEEecCccchHHHHHHHHHHhcCcE
Confidence 44577888999999643 24555 79999999998 5566889999999988765443 566788999
Q ss_pred eEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCC
Q 012238 201 WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLD 280 (467)
Q Consensus 201 ~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~ 280 (467)
++.++.++++.+. +. +.+++++++.+|.|||+.+.+ +++|+++|++++ +++|.++......
T Consensus 131 v~fvd~~~~~~~~---------l~--~~~tklv~~e~~snpt~~v~D---i~~I~~la~~~~--lvVD~t~~s~~~~--- 191 (384)
T PRK06434 131 VDYIDTDRLNSLD---------FD--PSNYDLIYAESITNPTLKVPD---IKNVSSFCHEND--VIVDATFASPYNQ--- 191 (384)
T ss_pred EEEECCCChhhee---------ec--CCCeeEEEEEcCCCCCceeec---HHHHHHHHHHcC--eEEECCCCCcccC---
Confidence 9999874322222 22 146789999999999998755 557777799998 4569995322211
Q ss_pred CChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHH
Q 012238 281 NDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIV 360 (467)
Q Consensus 281 ~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 360 (467)
.++ .. .-.+++.|.+|.++-+|-=+|.++ ++.++++.++ ++..........+.+..+++
T Consensus 192 ---~pl----~~-gaDivv~S~tK~i~G~~d~~gG~v-v~~~~~~~~~------------~~~~~~~~G~~~~~~~A~l~ 250 (384)
T PRK06434 192 ---NPL----DL-GADVVIHSATKYISGHSDVVMGVA-GTNNKSIFNN------------LVERRKTLGSNPDPIQAYLA 250 (384)
T ss_pred ---Cch----hc-CCCEEEeecccccCCCCCceEEEE-ecCcHHHHHH------------HHHHHHhcCCCCCHHHHHHH
Confidence 112 11 245888999999976553345543 3567766665 33222222333344433333
Q ss_pred HHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 012238 361 ANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD 399 (467)
Q Consensus 361 ~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~ 399 (467)
..-|+ .+..+.++..++...+.+.|+ ..
T Consensus 251 ~~gL~----------tL~~R~~r~~~~a~~~a~~L~-~~ 278 (384)
T PRK06434 251 LRGLK----------TLGLRMEKHNKNGMELARFLR-DS 278 (384)
T ss_pred HhCCC----------cHHHHHHHHHHHHHHHHHHHH-cC
Confidence 22222 245556666677777777777 54
No 289
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.59 E-value=2.7e-13 Score=147.68 Aligned_cols=344 Identities=12% Similarity=0.085 Sum_probs=193.9
Q ss_pred ccCCCCCCCC-chHHHHHHHHHHHhc---CCCCcCC----CCcchHHHHHHHHHHHhCCCCcccccC-ceeeeecCCchh
Q 012238 92 AYRTEELQPY-VLDVVKKAENLMLER---GENKEYL----PIEGLAAFNKVTAELLFGADNSVLKEQ-RVATVQGLSGTG 162 (467)
Q Consensus 92 ~~~d~~~~p~-~~~~v~~a~~~~~~~---~~~~~Y~----~~~G~~~lr~aia~~l~~~~~~~~~~~-~i~~~~t~ggt~ 162 (467)
.|+|..+..+ .+..|.+++...... +....|. ...-+.+.|+.+|++++... .+ .|++ |.|+|+
T Consensus 36 iYLD~Aatt~~~~~~V~~~~~~~~~~~~~np~s~~~~s~~~~~~~e~aR~~ia~~lga~~-----~~~~VvF--tsnaT~ 108 (805)
T PLN02724 36 VYLDHAGATLYSESQLEAALADFSSNVYGNPHSQSDSSMRSSDTIESARQQVLEYFNAPP-----SDYACVF--TSGATA 108 (805)
T ss_pred EeEeCCCCCCCCHHHHHHHHHHHHhhccCCCCcCcchhhhHHHHHHHHHHHHHHHhCCCc-----cceEEEE--eCChHH
Confidence 3555555444 345667666655422 1111121 12247889999999986541 23 5777 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchH---HHHhhCCCCeEEeeeecC------CCCCCCh--hhHHHHHH----c--
Q 012238 163 SLRLAAALIERYFPGAKVLISSPTWGNHK---NIFNDARVPWSEYRYYDP------KTVGLDF--EGMIADIK----A-- 225 (467)
Q Consensus 163 al~l~~~~l~~~~~gd~Vlv~~P~y~~~~---~~~~~~G~~~~~v~~~~~------~~~~~d~--~~l~~~l~----~-- 225 (467)
|+++++..+ .+.+||+|++..-.|.... ..++..|+++..++.+.+ ....++. +.+++.++ .
T Consensus 109 alnlva~~l-~~~~gd~Iv~t~~eH~svl~~~~~a~~~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~ 187 (805)
T PLN02724 109 ALKLVGETF-PWSSESHFCYTLENHNSVLGIREYALEKGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKRE 187 (805)
T ss_pred HHHHHHHHC-CCCCCCeEEEeeccccchHHHHHHHHHcCCeEEeccchhccccccccccccccchhhhhhhhhhhhcccc
Confidence 999974332 2468999999776665433 334567999999887411 1222333 55655432 1
Q ss_pred -CCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhc-----CCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEE
Q 012238 226 -APGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEK-----NHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVA 299 (467)
Q Consensus 226 -~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~-----~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 299 (467)
..++++++.++..+|-||..++.+++.++.+.+.++ ++++++|.+ +......++. ....-.+++
T Consensus 188 ~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaa-Q~~g~~piDv---------~~~~~Dfl~ 257 (805)
T PLN02724 188 DDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAA-KGCGTSPPDL---------SRYPADFVV 257 (805)
T ss_pred ccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehh-hhcCCCCCCh---------hhcCCCEEE
Confidence 124567999999999999999998655444433222 367999998 5554432221 111346788
Q ss_pred ecCccCcc-cCCCccceEEEecCCHHHHhhhhhhhHH--H---------HHHHHHh-hccCccCCCchHHHHHHHHHhCC
Q 012238 300 QSYSKNLG-LYAERIGAMNVVCSSSDLAARCCEVAVI--Q---------VKSQLKR-LARPMYSNPPVHGARIVANVVGN 366 (467)
Q Consensus 300 ~S~SK~~~-~~G~RiG~~~~v~~~~~~~~~~~~~~~~--~---------~~~~l~~-~~~~~~~~~~~~~~~~~~~~L~~ 366 (467)
.|+.|.+| +.| +|+++ ..++..+.-.+..++ . +...... -.+.....++..+..++..+++
T Consensus 258 ~S~HK~~GgP~G--~G~L~---vr~~~~~~l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~aal~- 331 (805)
T PLN02724 258 VSFYKIFGYPTG--LGALL---VRRDAAKLLKKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAALRHGFK- 331 (805)
T ss_pred EecceeccCCCC--ceEEE---EehhhhhhhcCCccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHHHHHHH-
Confidence 99999998 556 58876 334444330000000 0 0000000 0000011222222222322221
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC-CC--CcccccC---------CcceEEec--CC-----CHHHHHH
Q 012238 367 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKS-GK--DWSFILR---------QIGMFSFT--GL-----NKAQSDN 427 (467)
Q Consensus 367 ~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~-~~--~~~~~~~---------~~g~f~~~--~l-----~~~~~~~ 427 (467)
+.. +-.++++.++.++..+++.+.|+ ++.. ++ .++++.+ .++.+.|. +. ...++.+
T Consensus 332 --~l~--~ig~~~I~~~~~~L~~~l~~~L~-~l~~~~g~~~v~iyg~~~~~~~~~~r~~ivsFnv~~~~~~~v~~~~v~~ 406 (805)
T PLN02724 332 --LLN--RLTISAIAMHTWALTHYVANSLR-NLKHGNGAPVCVLYGNHTFKLEFHIQGPIVTFNLKRADGSWVGHREVEK 406 (805)
T ss_pred --HHH--HhChHHHHHHHHHHHHHHHHHHH-hccCCCCCeEEEEcCCCCCCCCcccccCEEEEEEEcCCCCEeCHHHHHH
Confidence 111 11256777888888999999988 6531 00 1333322 34554443 32 3455667
Q ss_pred HHHcccEEEeCC-----------------------------------------C--eEEeccC-ChhhHHHHHHHHHHHH
Q 012238 428 MTNKWHVYMTKD-----------------------------------------G--RISLAGL-SLAKCEYLADAIIDSY 463 (467)
Q Consensus 428 ll~~~gI~v~~g-----------------------------------------g--Ris~~~~-~~~~i~~~~~~l~~~l 463 (467)
+++++||.++.| | |+||+.+ +.+|+++++++|++.+
T Consensus 407 l~~~~gI~vR~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l~~~~ 486 (805)
T PLN02724 407 LASLSGIQLRTGCFCNPGACAKYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSFGYMSTFEDCQKFIDFIISSF 486 (805)
T ss_pred HHHhcCcEEeeccccCchHHHHHcCCCHHHHHHHhhcCCccCchhheecCcccceEEEEcCccCCHHHHHHHHHHHHHHh
Confidence 777778877321 4 8998866 5589999999999976
Q ss_pred H
Q 012238 464 H 464 (467)
Q Consensus 464 ~ 464 (467)
.
T Consensus 487 ~ 487 (805)
T PLN02724 487 V 487 (805)
T ss_pred h
Confidence 3
No 290
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.59 E-value=2e-12 Score=130.89 Aligned_cols=340 Identities=13% Similarity=0.047 Sum_probs=185.7
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCch
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (467)
+...||+..|.-...-|. -.|.|.+++.+.++......+ +.....+|-+.+.+.+.. ..+++.+ +++|+
T Consensus 52 G~~yiD~~~g~~~~~lGh--~~p~v~~ai~~q~~~~~~~~~-~~~~~~~la~~L~~~~~~------~~~~v~f--~~SGs 120 (433)
T PRK00615 52 GKTFIDFCGSWGSLIHGH--SHPKICDAIQQGAERGTSYGL-TSEQEILFAEELFSYLGL------EDHKIRF--VSSGT 120 (433)
T ss_pred CCEEEEcccchhccccCC--CCHHHHHHHHHHHHhCCCCCC-CCHHHHHHHHHHHHhCCC------CcCEEEE--eCchH
Confidence 457899987754212232 368888888888765432222 333334444455544311 1257888 99999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchHHH----HhhCCCC---e-EEe--e-eecC-CC-CCCChhhHHHHHHcCCC
Q 012238 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNI----FNDARVP---W-SEY--R-YYDP-KT-VGLDFEGMIADIKAAPG 228 (467)
Q Consensus 162 ~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~----~~~~G~~---~-~~v--~-~~~~-~~-~~~d~~~l~~~l~~~~~ 228 (467)
+|.+.+.++........+|+...-+|.++... ....+-. . ..+ + .... .. .-.|.+.+++.+.+...
T Consensus 121 EA~e~AiklAr~~tgr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~ 200 (433)
T PRK00615 121 EATMTAVRLARGITGRSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTVMNSLGH 200 (433)
T ss_pred HHHHHHHHHHHHhhCCCEEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhcCC
Confidence 99999866544443335788888888775321 1111100 0 000 0 0000 00 01377888888875444
Q ss_pred CcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcc
Q 012238 229 GSFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG 307 (467)
Q Consensus 229 ~~~~i~i~~p~NPTG~~~-~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 307 (467)
+..++++-....-.|... +.+.+++|.++|++||+++|+||+..++..+. .... ....-.++++ .++|.+|
T Consensus 201 ~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~R~G~----~ga~-~~~gv~PDi~---~~gK~lg 272 (433)
T PRK00615 201 RVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGFRVAQ----GGAA-AIYHVKPDIT---VYGKILG 272 (433)
T ss_pred ceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccccccccH----hHHH-HhcCCCCCeE---EEccccc
Confidence 555666555555556655 57789999999999999999999987773331 1111 1112223433 3799998
Q ss_pred cCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhc---cCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q 012238 308 LYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLA---RPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRI 384 (467)
Q Consensus 308 ~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~ 384 (467)
.|+.+|+++ +++++++. +.... ...+.+.+.+...++...|+- +.+ ++.+++..+.-
T Consensus 273 -gG~p~~av~---~~~~i~~~------------~~~~~~~~~~~T~~g~p~~~aa~la~L~~--i~~--~~~~~~~~~~g 332 (433)
T PRK00615 273 -GGLPAAAVV---AHKSIMDH------------LAPEGTIFQAGTLSGNPLAMAAGKASINL--CRE--QGFYTQLSTLE 332 (433)
T ss_pred -CCcceeeee---ecHHHHhh------------hcCCCCcccCCCCcccHHHHHHHHHHHHH--Hhc--ccHHHHHHHHH
Confidence 677788884 78887776 42111 111223344444555444431 100 01112222222
Q ss_pred HHHHHHHHHHhhhccCCCCCcccccCCcceEEe-c-CC-----------CH----HHHHHHHHcccEEEeCCC----eEE
Q 012238 385 KNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSF-T-GL-----------NK----AQSDNMTNKWHVYMTKDG----RIS 443 (467)
Q Consensus 385 ~~~r~~l~~~l~~~~g~~~~~~~~~~~~g~f~~-~-~l-----------~~----~~~~~ll~~~gI~v~~gg----Ris 443 (467)
...++.|.+.+. +.|++ +.... .|.++.+ + .- +. .+...+++ +||++.+.. -||
T Consensus 333 ~~l~~~l~~~~~-~~g~~--v~~~r-~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~~~~~~~ls 407 (433)
T PRK00615 333 QNFLSPIEEMIR-SQGFP--VSLVR-YGSMFSFFFNENRPNNLAEAQLSDIEAFQTFYQSAFS-KGVYLSPSPFEASFLS 407 (433)
T ss_pred HHHHHHHHHHHH-HcCCC--eEEEe-eceEEEEEEeCCCCCChHHHhhCCHHHHHHHHHHHHH-CCeeecCcccccccee
Confidence 222333344444 44432 22222 3333311 1 10 11 23445555 599998864 366
Q ss_pred eccCChhhHHHHHHHHHHHHHhc
Q 012238 444 LAGLSLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 444 ~~~~~~~~i~~~~~~l~~~l~~~ 466 (467)
... ++++++++++++.++++++
T Consensus 408 ~~h-t~~did~~~~a~~~~~~~~ 429 (433)
T PRK00615 408 SAH-SMENLDYAQNVLIDSLEKV 429 (433)
T ss_pred cCC-CHHHHHHHHHHHHHHHHHH
Confidence 666 8999999999999999864
No 291
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.59 E-value=4.5e-12 Score=129.08 Aligned_cols=342 Identities=12% Similarity=0.026 Sum_probs=185.4
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCch
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (467)
+.+.||+..|..-..-|. -.|.|.+++.+.+.... +...+ .-..+....+|+.+....... ..+++.+ +++|+
T Consensus 53 G~~ylD~~~g~~~~~lGh--~~p~v~~Ai~~ql~~~~-~~~~~-~~~~~~~~~lAe~L~~~~p~~-~~~~v~f--~~SGs 125 (441)
T PRK05769 53 GNVYLDFNAGIAVTNVGH--AHPKVVKAVKEQAEKFL-HYSLT-DFYYEPAVELAERLVEIAPGG-FEKKVFF--TNSGT 125 (441)
T ss_pred CCEEEECCCchhhcccCC--CCHHHHHHHHHHHHhcc-CccCc-ccCCHHHHHHHHHHHHhCCCC-CCCEEEE--CCchH
Confidence 457899988754222232 36778888888775422 11100 001122334444443321100 0258888 99999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHH-hhCCC-------------CeEEeeeecCCC--CC-C--------Ch
Q 012238 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIF-NDARV-------------PWSEYRYYDPKT--VG-L--------DF 216 (467)
Q Consensus 162 ~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~-~~~G~-------------~~~~v~~~~~~~--~~-~--------d~ 216 (467)
+|.+.+.++........+|+...-+|.+..... ...|. .+..++..+... +. - +.
T Consensus 126 EA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (441)
T PRK05769 126 ESNEAAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNAVL 205 (441)
T ss_pred HHHHHHHHHHHHHhCCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCccccccccCCchHHHHHHHH
Confidence 999998665444444468888888887654322 22111 122222210000 00 0 12
Q ss_pred hhHHH-HHHc--CCCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhc
Q 012238 217 EGMIA-DIKA--APGGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR 292 (467)
Q Consensus 217 ~~l~~-~l~~--~~~~~~~i~i~~p~NPTG~~-~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~ 292 (467)
+.+++ .++. .+.+..++++-..+.-.|.. .+.+.+++|.++|++||+++|+||++.++...+ ..+....+ ..
T Consensus 206 ~~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~gr~G---~~~a~~~~-gv 281 (441)
T PRK05769 206 DFIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGRTG---KMFAIEHF-GV 281 (441)
T ss_pred HHHHHHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccc---ceehhhcc-CC
Confidence 33555 2221 23455666665555556664 457889999999999999999999998774321 11111111 11
Q ss_pred CCeEEEEecCccCcccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHH
Q 012238 293 GMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDE 372 (467)
Q Consensus 293 ~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~ 372 (467)
.++++ +|+|.++ .|+++|+++ .++++.+. ........+ +.+.+++.++...|+- +
T Consensus 282 ~pDiv---t~~K~l~-~G~p~gav~---~~~~i~~~------------~~~~~~~T~-~g~p~~~aaa~a~L~~--l--- 336 (441)
T PRK05769 282 EPDII---TLAKAIA-GGLPLGAVI---GRAELMFL------------PPGSHANTF-GGNPVAAAAALATLEE--L--- 336 (441)
T ss_pred CCCEE---EEccccc-CCcccEEEE---Eehhhhhc------------CCCCCCCCC-CcCHHHHHHHHHHHHH--H---
Confidence 23443 4799999 899999985 66666543 222222223 3455666666655531 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhccC--CCCCcccccCCcceEE--ecCC----C----HHHHHHHHHcccEEEeCCC
Q 012238 373 WKAEMEMMAGRIKNVRQKLFDSLSAKDK--SGKDWSFILRQIGMFS--FTGL----N----KAQSDNMTNKWHVYMTKDG 440 (467)
Q Consensus 373 ~~~~l~~~~~~~~~~r~~l~~~l~~~~g--~~~~~~~~~~~~g~f~--~~~l----~----~~~~~~ll~~~gI~v~~gg 440 (467)
+ + ...++.+++-++|.+.|+ ++. .+. ...+...|.++. +.+. + ..+.+.+++ +||++.+.|
T Consensus 337 -~-~--~~~~~~~~~g~~l~~~L~-~l~~~~~~-~~~vrg~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~Gil~~~~~ 409 (441)
T PRK05769 337 -E-E--GLLENAQKLGEYLRKELK-ELKEKYEF-IGDVRGLGLMIGVELVKDRKEPDPKLRDKVLYEAFK-RGLLLLGAG 409 (441)
T ss_pred -H-H--HHHHHHHHHHHHHHHHHH-HHHHhCCC-eeeeecceEEEEEEeccCCccccHHHHHHHHHHHHh-CCcEEecCC
Confidence 1 1 344555555566666665 432 110 111222232221 1111 1 123445554 699998765
Q ss_pred ----eEEecc-CChhhHHHHHHHHHHHHHhc
Q 012238 441 ----RISLAG-LSLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 441 ----Ris~~~-~~~~~i~~~~~~l~~~l~~~ 466 (467)
||+... +++++++++++++.+++.++
T Consensus 410 ~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~ 440 (441)
T PRK05769 410 KSAIRIIPPLIITEEEADIGLEILEEAIKEL 440 (441)
T ss_pred CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 666432 48899999999999998765
No 292
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.58 E-value=7.2e-12 Score=127.31 Aligned_cols=336 Identities=14% Similarity=0.077 Sum_probs=188.3
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCch
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (467)
+...||+..|.--..-|. -.|.|.+++.+.+.......+ +.....++-+.+++... + .+++.+ +++|+
T Consensus 52 G~~ylD~~~g~~~~~lGh--~~p~v~~ai~~q~~~~~~~~~-~~~~~~~la~~l~~~~p---~----~~~v~f--~~sGs 119 (428)
T PRK12389 52 GNKYIDYLAAYGPIITGH--AHPHITKAITEAAENGVLYGT-PTELEIEFAKMLKEAIP---S----LEKVRF--VNSGT 119 (428)
T ss_pred CCEEEEccccccccccCC--CCHHHHHHHHHHHHhCCccCC-CCHHHHHHHHHHHHhCC---C----CcEEEE--eCCHH
Confidence 457899987754222222 367888888888765432222 33333444444444421 1 357888 99999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchHHH-HhhCCCCeE--------Eeee-ecCCC---CCCChhhHHHHHHcCCC
Q 012238 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNI-FNDARVPWS--------EYRY-YDPKT---VGLDFEGMIADIKAAPG 228 (467)
Q Consensus 162 ~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~-~~~~G~~~~--------~v~~-~~~~~---~~~d~~~l~~~l~~~~~ 228 (467)
+|.+.+.++........+|+...-+|...... +...|.... .++. ..++. .-.|++.+++.+++...
T Consensus 120 eA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~ 199 (428)
T PRK12389 120 EAVMTTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPFNDIEALKEALDKWGD 199 (428)
T ss_pred HHHHHHHHHHHHhhCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCCCCHHHHHHHHHhcCC
Confidence 99999866554444446888888888765432 222221110 0000 00000 01378889888875444
Q ss_pred CcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcc
Q 012238 229 GSFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG 307 (467)
Q Consensus 229 ~~~~i~i~~p~NPTG~~~-~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 307 (467)
....+++-..+.-.|.+. +.+.+++|.++|++||+++|.||+..+|..+. .... ....-.+++ -+++|.++
T Consensus 200 ~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~Rt~~----~~a~-~~~gv~PDi---vt~gK~lg 271 (428)
T PRK12389 200 EVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAFRFMY----GGAQ-DLLGVEPDL---TALGKIIG 271 (428)
T ss_pred cEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccccccccCc----chhh-HHhCCCCCe---eeechhhc
Confidence 556666666666667654 67789999999999999999999988774321 1111 111222343 36799998
Q ss_pred cCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHh---hccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q 012238 308 LYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKR---LARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRI 384 (467)
Q Consensus 308 ~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~ 384 (467)
.|+.+|.++ .++++.+. +.. .....+.+.++++..++.+.|+- + ++ +...++.
T Consensus 272 -gG~Pi~av~---~~~~i~~~------------~~~~~~~~~~~T~~gnpl~~Aaala~L~~--l----~~--~~l~~~~ 327 (428)
T PRK12389 272 -GGLPIGAYG---GRKDIMEQ------------VAPLGPAYQAGTMAGNPASMAAGIACLEV--L----QQ--EGVYEKL 327 (428)
T ss_pred -CCCceeEEe---EHHHHHhh------------hccCCCcccccCCccCHHHHHHHHHHHHH--H----hc--ccHHHHH
Confidence 789899984 67777766 321 11111223445555555544431 1 00 1233334
Q ss_pred HHHHHHHHHHhhh---ccCCCCCcccccCCcceE-Eec-C--C---------C----HHHHHHHHHcccEEEeCCC----
Q 012238 385 KNVRQKLFDSLSA---KDKSGKDWSFILRQIGMF-SFT-G--L---------N----KAQSDNMTNKWHVYMTKDG---- 440 (467)
Q Consensus 385 ~~~r~~l~~~l~~---~~g~~~~~~~~~~~~g~f-~~~-~--l---------~----~~~~~~ll~~~gI~v~~gg---- 440 (467)
+++-+++.+.|++ +.+.. ..+. ..+|++ +.+ . . + ..+...+++ +||++.+.+
T Consensus 328 ~~~g~~l~~~L~~l~~~~~~~--~~v~-r~~g~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~~~~~~ 403 (428)
T PRK12389 328 DRLGAMLEEGILEAAEKHGIT--ITIN-RLKGALTVYFTDEKVTNYDQAERSDGEAFGKFFKLMLN-QGINLAPSKYEAW 403 (428)
T ss_pred HHHHHHHHHHHHHHHHhCCCC--EEEE-ecCcEEEEEEeCCCCCChhhhcccCHHHHHHHHHHHHH-CCcEeecCCCCCe
Confidence 4444444444440 23321 1211 223343 211 1 0 1 123445554 699998864
Q ss_pred eEEeccCChhhHHHHHHHHHHHHHhc
Q 012238 441 RISLAGLSLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 441 Ris~~~~~~~~i~~~~~~l~~~l~~~ 466 (467)
.+++.. ++++++++++++.++++++
T Consensus 404 ~~~l~~-t~e~id~~~~~l~~~l~~~ 428 (428)
T PRK12389 404 FLTTAH-TEEDIEETLEAVDRAFAQL 428 (428)
T ss_pred eecCCC-CHHHHHHHHHHHHHHHHhC
Confidence 344444 8899999999999998764
No 293
>PLN03032 serine decarboxylase; Provisional
Probab=99.57 E-value=2.3e-12 Score=127.40 Aligned_cols=286 Identities=13% Similarity=0.044 Sum_probs=176.7
Q ss_pred hHHHHHHHHHHHhCCCCcccccCce--eeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEee
Q 012238 128 LAAFNKVTAELLFGADNSVLKEQRV--ATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYR 205 (467)
Q Consensus 128 ~~~lr~aia~~l~~~~~~~~~~~~i--~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~ 205 (467)
..+.++.++++++.. ++++ ++ |+|||+|+..+........++..|+++.-.+......++.+|..++.+|
T Consensus 68 e~~v~~~ia~llg~~------~~~~~G~f--TsGGTEaNl~al~~ar~~~~~~~vi~s~~~H~Sv~kaa~~lg~~~~~V~ 139 (374)
T PLN03032 68 EVGVLDWFARLWELE------KDEYWGYI--TTCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMEAVKVP 139 (374)
T ss_pred HHHHHHHHHHHhCCC------CccCCEEE--eCchHHHHHHHHHHHHHhCCCcEEEeCCCceeHHHHHHHHcCCCCeEee
Confidence 456666677776542 5555 66 9999999988733222223566899998899889999999999999999
Q ss_pred eecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcC-----CeeEEeccCCCCCCCCCC
Q 012238 206 YYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKN-----HIPFFDVAYQGFASGSLD 280 (467)
Q Consensus 206 ~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~-----~~li~Deay~~~~~~~~~ 280 (467)
+ +.++.+|++.|++.+++...++.+++++..+|+||.+-+.+ +|+++|+++| +++.+|.+|.++... ..
T Consensus 140 ~--d~~g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~idpi~---eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p-~~ 213 (374)
T PLN03032 140 T--LPSGEIDYDDLERALAKNRDKPAILNVNIGTTVKGAVDDLD---RILRILKELGYTEDRFYIHCDGALFGLMMP-FV 213 (374)
T ss_pred e--CCCCcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccCCCHH---HHHHHHHHhCCCCCCeeEEEEccchhhhhh-cc
Confidence 8 44678999999999985433677888888999999987766 6666688986 589999997664321 00
Q ss_pred CChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccC-------ccCCCc
Q 012238 281 NDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARP-------MYSNPP 353 (467)
Q Consensus 281 ~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~-------~~~~~~ 353 (467)
...+.+ .+. . .-.-+.-|.+|.++.| ..+|.++ ..+ +.++. +...... ...+-+
T Consensus 214 ~~~~~~-~~~-~-~vDSis~s~HK~~g~P-~g~G~ll--~r~-~~~~~------------~~~~~~Yl~~~d~ti~gSR~ 274 (374)
T PLN03032 214 SRAPEV-TFR-K-PIGSVSVSGHKFLGCP-MPCGVAL--TRK-KHVKA------------LSQNVEYLNSRDATIMGSRN 274 (374)
T ss_pred CCCccc-CCC-c-CCcEEEECcccccCCC-cCeEEEE--EEc-hhhHh------------hccCCcccCCCCCcccCCCc
Confidence 000001 011 1 1345678899998833 3468775 233 33333 2111000 011111
Q ss_pred ---hHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceEEecCCCHHHHHHHHH
Q 012238 354 ---VHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTN 430 (467)
Q Consensus 354 ---~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~~~g~f~~~~l~~~~~~~ll~ 430 (467)
.+..++....+. .+.+.++.++..+..+++.+.|+ +.++ ..+..|.....+|..-..+. +.+
T Consensus 275 g~~~l~~w~~l~~~G--------~~g~~~~~~~~~~~a~~l~~~l~-~~~~---~~~~~p~~~~V~f~~~~~~~---~~~ 339 (374)
T PLN03032 275 GHAPLYLWYTLRRKG--------YRGIKRDVQHCMRNAHYLKDRLT-EAGL---TCRLNELSSTVVFERPMDEA---FIK 339 (374)
T ss_pred hHHHHHHHHHHHHhC--------HHHHHHHHHHHHHHHHHHHHHHH-hCCC---cEEECCCceEEEEcCCCcHh---Hhh
Confidence 222222222221 24466777888888888999998 7664 12345555544444332221 334
Q ss_pred cccEEEeCCC-eEEecc-CChhhHHHHHHHHHH
Q 012238 431 KWHVYMTKDG-RISLAG-LSLAKCEYLADAIID 461 (467)
Q Consensus 431 ~~gI~v~~gg-Ris~~~-~~~~~i~~~~~~l~~ 461 (467)
++.+...++. ||.+.. .+.+.++++++-|++
T Consensus 340 ~w~l~~~~~~~hi~vm~~~~~~~id~fi~dl~~ 372 (374)
T PLN03032 340 KWQLACEGDIAHVVVMPNVTVEKLDEFVEELVE 372 (374)
T ss_pred eeeecccCCEEEEEECCCCCHHHHHHHHHHHhc
Confidence 5555554443 777654 466778888877765
No 294
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.57 E-value=1.9e-12 Score=125.41 Aligned_cols=187 Identities=19% Similarity=0.150 Sum_probs=135.5
Q ss_pred CcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHh----hCCCC
Q 012238 125 IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN----DARVP 200 (467)
Q Consensus 125 ~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~----~~G~~ 200 (467)
.+....+.+.+++..... +.++ .++|+.|+..+ ++.++.+|++|+.....|.....+++ .+|++
T Consensus 76 nPt~~~le~~iaal~ga~--------~~l~--fsSGmaA~~~a--l~~L~~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie 143 (409)
T KOG0053|consen 76 NPTRDVLESGIAALEGAA--------HALL--FSSGMAAITVA--LLHLLPAGDHIVATGDVYGGTLRILRKFLPKFGGE 143 (409)
T ss_pred CCchHHHHHHHHHHhCCc--------eEEE--ecccHHHHHHH--HHHhcCCCCcEEEeCCCcccHHHHHHHHHHHhCce
Confidence 344567888888885432 4656 79999999988 66677899999999999987766554 67777
Q ss_pred eEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCC
Q 012238 201 WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLD 280 (467)
Q Consensus 201 ~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~ 280 (467)
...++. -|++++++.++ ++++++++-+|.||+..+.+.+ +|+++|+++|+++|+|+.+.....-
T Consensus 144 ~~~vd~-------~~~~~~~~~i~---~~t~~V~~ESPsNPll~v~DI~---~l~~la~~~g~~vvVDnTf~~p~~~--- 207 (409)
T KOG0053|consen 144 GDFVDV-------DDLKKILKAIK---ENTKAVFLESPSNPLLKVPDIE---KLARLAHKYGFLVVVDNTFGSPYNQ--- 207 (409)
T ss_pred eeeech-------hhHHHHHHhhc---cCceEEEEECCCCCccccccHH---HHHHHHhhCCCEEEEeCCcCccccc---
Confidence 777655 36677877777 5899999999999999987766 6666688999999999997766322
Q ss_pred CChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHH
Q 012238 281 NDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIV 360 (467)
Q Consensus 281 ~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 360 (467)
++. .. .-.|++.|.+|.++-.+-=+|.++ +...+++..+ ++..+.....++++......
T Consensus 208 -~pL------~l-GADIV~hSaTKyi~Ghsdvi~G~i-v~n~~~~~~~------------l~~~~~~lg~~~~p~~~~ll 266 (409)
T KOG0053|consen 208 -DPL------PL-GADIVVHSATKYIGGHSDVIGGSV-VLNSEELASR------------LKFLQEDLGWCEDPFDLFLL 266 (409)
T ss_pred -Chh------hc-CCCEEEEeeeeeecCCcceeeeEE-ecCcHHHHHH------------HHHHHHHhcCCCCHHHHHHH
Confidence 222 11 246899999999986666566664 2345777777 55555555556666654443
No 295
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.56 E-value=2.4e-12 Score=127.88 Aligned_cols=318 Identities=11% Similarity=0.018 Sum_probs=183.2
Q ss_pred CCCCchHHHHHHHHHHHhcCC-CCcCCC--CcchHHHHHHHHHHHhCCCCcccccCceeeeec-CCchhHHHHHHHHHHH
Q 012238 98 LQPYVLDVVKKAENLMLERGE-NKEYLP--IEGLAAFNKVTAELLFGADNSVLKEQRVATVQG-LSGTGSLRLAAALIER 173 (467)
Q Consensus 98 ~~p~~~~~v~~a~~~~~~~~~-~~~Y~~--~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t-~ggt~al~l~~~~l~~ 173 (467)
|+..+++.|++++......-. ...+.+ ..-+.+.|+.++++++... ..+|++ + .+||.+++.+ +...
T Consensus 10 GP~~~~~~v~~a~~~~~~~~~~~~hr~~~f~~~~~~~r~~l~~l~~~~~-----~~~v~f--~~gs~T~a~~~~--~~~l 80 (361)
T TIGR01366 10 GPSKVRLEQLQALTTTAASLFGTSHRQAPVKNLVGRVREGLAELFSLPD-----GYEVIL--GNGGATAFWDAA--TFGL 80 (361)
T ss_pred CCcCCCHHHHHHHHhcCccccccCcCChHHHHHHHHHHHHHHHHhCCCC-----CceEEE--ECCchhHHHHHH--HHhc
Confidence 334468889988764310000 011111 3456788999999976431 346766 5 5699999997 3333
Q ss_pred hCCCCEEEEcCCCCc-chHHHHhhC--CCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHH
Q 012238 174 YFPGAKVLISSPTWG-NHKNIFNDA--RVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQ 250 (467)
Q Consensus 174 ~~~gd~Vlv~~P~y~-~~~~~~~~~--G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~ 250 (467)
+.+ +.+++..-.|. .+...++.. +.++..++.. ++..++.+ +. ++++++.+++..|.||...+.++
T Consensus 81 ~~~-~~l~i~~G~~~~~~~~~a~~~~~~~~~~~~~~~--~~~~~~~~-----~~---~~~~lV~~~h~et~tG~~~pi~~ 149 (361)
T TIGR01366 81 IEK-KSLHLSFGEFSSKFAKAVKLAPWLGEPIIVTAD--PGSAPEPQ-----AD---PGVDVIAWAHNETSTGVAVPVRR 149 (361)
T ss_pred ccc-cccEEecCHHHHHHHHHHHhhhccCCceEEecC--CCCCCCCc-----cC---CCCCEEEEcccCCccceeccccc
Confidence 332 33344444443 344445542 2366777652 23333331 22 57889999999999999999775
Q ss_pred HHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecCCHHHHhhhh
Q 012238 251 WEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARCC 330 (467)
Q Consensus 251 l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~ 330 (467)
+ ++++|+++|+|.+ +.+.....+.+ . -.+++.|-.|.+|.+|- ++.+ ..+++.+++..
T Consensus 150 I------~~~~g~~~iVDav-qs~g~~~idv~---------~--~D~~~~s~~K~lg~~~G-l~~~---~~s~~~~~~~~ 207 (361)
T TIGR01366 150 P------EGSDDALVVIDAT-SGAGGLPVDIA---------E--TDVYYFAPQKNFASDGG-LWLA---IMSPAALERIE 207 (361)
T ss_pred c------cccCCCeEEEEcC-ccccCCCCCHH---------H--CCEEEEEchhhcCCCCc-eEEE---EECHHHHhhhh
Confidence 4 5789999999999 65554332211 1 24678889999998752 2332 35565554410
Q ss_pred h--------hhHHHHHHHHHhhccCccCCCchHH-HHHHHHHhCChhhHHHHHH-HHHHHHHHHHHHHHHHHHHhhhccC
Q 012238 331 E--------VAVIQVKSQLKRLARPMYSNPPVHG-ARIVANVVGNPALFDEWKA-EMEMMAGRIKNVRQKLFDSLSAKDK 400 (467)
Q Consensus 331 ~--------~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~L~~~~~~~~~~~-~l~~~~~~~~~~r~~l~~~l~~~~g 400 (467)
. +.+.++...+.......+.+.+.+. ..++..+++. + . +. .++.+.+++++..+++++.++ +.+
T Consensus 208 ~~~~~~~~~p~~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~--l-~--~~gg~e~~~~r~~~l~~~l~~~l~-~~~ 281 (361)
T TIGR01366 208 AIAASGRWVPEFLSLPTAVDNSLKNQTYNTPAIATLALLAEQIDW--M-N--GNGGLDWAVARTADSSSRLYSWAQ-ERP 281 (361)
T ss_pred cccCCCCCCchhhhHHHHHhccccCCCCCCchHHHHHHHHHHHHH--H-H--HccCHHHHHHHHHHHHHHHHHHHH-hCC
Confidence 0 0012222222211111222333332 2222222221 1 0 11 256777889999999999998 776
Q ss_pred CCCCccccc-C------CcceEEec-CCCHHHHHHHHHcccEEEeCC-----C---eEEeccC-ChhhHHHHHHHHHHHH
Q 012238 401 SGKDWSFIL-R------QIGMFSFT-GLNKAQSDNMTNKWHVYMTKD-----G---RISLAGL-SLAKCEYLADAIIDSY 463 (467)
Q Consensus 401 ~~~~~~~~~-~------~~g~f~~~-~l~~~~~~~ll~~~gI~v~~g-----g---Ris~~~~-~~~~i~~~~~~l~~~l 463 (467)
. ++... . ..+.+.|. +++.+.+...++++||.+.++ + |||+... +.+++++++++|++++
T Consensus 282 ~---~~~~~~~~~~~s~~v~~v~~~~g~~~~~v~~~L~~~gI~i~~~~~~l~~~~vRis~~~~~t~~di~~l~~al~~~~ 358 (361)
T TIGR01366 282 Y---ATPFVTDPGKRSQVVGTIDFVDDIDAATVAKILRANGIVDTEPYRKLGRNQLRVAMFPAIDPDDVEALTECVDWVV 358 (361)
T ss_pred C---cccCCCChhhcccceEEEECCCccCHHHHHHHHHHCCCeeccCccccCCCcEEEEcCCCCCHHHHHHHHHHHHHHH
Confidence 3 22221 1 11334443 456666655556679999876 1 9997654 6799999999999998
Q ss_pred Hhc
Q 012238 464 HNV 466 (467)
Q Consensus 464 ~~~ 466 (467)
+++
T Consensus 359 ~~~ 361 (361)
T TIGR01366 359 ERL 361 (361)
T ss_pred hhC
Confidence 764
No 296
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.55 E-value=9.4e-13 Score=129.60 Aligned_cols=321 Identities=18% Similarity=0.240 Sum_probs=179.7
Q ss_pred CcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCC------CCcc---hHHHHHHHHHHHhCCCCcccccCceee
Q 012238 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYL------PIEG---LAAFNKVTAELLFGADNSVLKEQRVAT 154 (467)
Q Consensus 84 ~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~------~~~G---~~~lr~aia~~l~~~~~~~~~~~~i~~ 154 (467)
+.|+|-..++ +++|.+++++...+......+|+ ...- ++.+-...++.+++.. ..+.-+-
T Consensus 21 ~~l~LiaSEN-------~~Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~ra~~lF~~~----~~~w~an 89 (399)
T PF00464_consen 21 STLNLIASEN-------YMSPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIERAKELFGAE----PKEWYAN 89 (399)
T ss_dssp HSEE-CTT------------HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHHHHHHHHT-S----TTTEEEE
T ss_pred cCccccCccc-------ccCHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHHHHHHHhCCC----cccceEE
Confidence 5788887654 23788999988877554434332 1222 3333333344444431 0123455
Q ss_pred eecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHH---HH-------hhCCCCeEEeeeecCCCCCCChhhHHHHHH
Q 012238 155 VQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKN---IF-------NDARVPWSEYRYYDPKTVGLDFEGMIADIK 224 (467)
Q Consensus 155 ~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~---~~-------~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~ 224 (467)
||..+|+.|...+ +.+++.|||+|+..++...++.. .. .....+.+.|+++ ++++.+|.+++++.++
T Consensus 90 vqp~SGs~An~av--~~aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d-~~~~~ID~d~l~~~a~ 166 (399)
T PF00464_consen 90 VQPHSGSQANLAV--YMALLKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVD-PDTGLIDYDELEKLAK 166 (399)
T ss_dssp ---SSHHHHHHHH--HHHHT-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB--TTTSSB-HHHHHHHHH
T ss_pred eecCCchHHHHHH--HHHHHhhcCcEEecChhhcccccccccccccccccccceEEEEeeeee-cCCCeECHHHHHHHHh
Confidence 6789999999887 67778899999999977765532 11 1123467778885 4578899999999998
Q ss_pred cCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCC-CCCCCCCCCChhHHHHHHhcCCeEEEEecCc
Q 012238 225 AAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ-GFASGSLDNDASSVRLFATRGMELLVAQSYS 303 (467)
Q Consensus 225 ~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~S 303 (467)
+ .++++|++..-.+|- .-+++++.++|.+.|.++++|.++. ++..++.- ..++ + .-.++.+|..
T Consensus 167 ~--~kPklIi~G~S~y~~-----~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~--~~P~----~--~ADvvt~sTh 231 (399)
T PF00464_consen 167 E--HKPKLIICGASSYPR-----PIDFKRFREIADEVGAYLMADISHIAGLIAGGLF--PNPF----P--YADVVTGSTH 231 (399)
T ss_dssp H--H--SEEEEE-SSTSS--------HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS----GC----C--TSSEEEEESS
T ss_pred h--cCCCEEEECchhccC-----ccCHHHHHHHHHhcCcEEEecccccccceehhee--cCcc----c--cceEEEeecc
Confidence 7 455677766555443 3457788888999999999999953 44333211 1111 1 1348899999
Q ss_pred cCcccCCCccceEEEecC-------------CHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHH-HHHHHhCChhh
Q 012238 304 KNLGLYAERIGAMNVVCS-------------SSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGAR-IVANVVGNPAL 369 (467)
Q Consensus 304 K~~~~~G~RiG~~~~v~~-------------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~L~~~~~ 369 (467)
|+| +|-|-|.|. +. ++++.++ +.....+...+.+..... +.+..|.
T Consensus 232 Ktl--~GPrggiI~--~~~~~~~~~~~~~~~~~~l~~~------------I~~avfP~~qg~~h~~~iaalAval~---- 291 (399)
T PF00464_consen 232 KTL--RGPRGGIIL--TNKGSKNVDKKGKEIDEELAEK------------IDSAVFPGLQGGPHMHRIAALAVALK---- 291 (399)
T ss_dssp GGG---SSS-EEEE--ES-SEEEE-TTS-EEEHHHHHH------------HHHHHTTTT-SS--HHHHHHHHHHHH----
T ss_pred ccc--cccCceEEE--EcCCccccCCcccccHHHHHHH------------hccccCCCcccCcchhHHHHHHHHHh----
Confidence 997 677778875 55 3666666 666655544433333222 2222221
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceE-EecC-----CCHHHHHHHHHcccEEEeC----C
Q 012238 370 FDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMF-SFTG-----LNKAQSDNMTNKWHVYMTK----D 439 (467)
Q Consensus 370 ~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~~~g~f-~~~~-----l~~~~~~~ll~~~gI~v~~----g 439 (467)
+....+.++..++..++.+.|.+.|. +.| +++.....-.+ +|++ ++...+++.|++.||.+.. +
T Consensus 292 -ea~~~~fk~Ya~qVv~NAk~La~~L~-~~G----~~v~~ggTd~H~vlvd~~~~~~~g~~a~~~Le~~gI~vnkn~iP~ 365 (399)
T PF00464_consen 292 -EALSPEFKEYAKQVVKNAKALAEALQ-ERG----FKVVTGGTDNHQVLVDLRSFGIDGKEAEKALEEAGIIVNKNTIPG 365 (399)
T ss_dssp -HHTSHHHHHHHHHHHHHHHHHHHHHH-HTT-----EEGGGS-SSSEEEEEGGGGTS-HHHHHHHHHHTTEE-EEE--TT
T ss_pred -cccCHHHHHHHHHHHHHHHHHHHHHh-hCC----cEEEECCCCCCeEEEEecccccchHHHHHHHHhcCeeecccccCC
Confidence 11112345677778888999999999 888 45554322223 4543 4667788999999998843 2
Q ss_pred --------C-eEEec-----cCChhhHHHHHHHH
Q 012238 440 --------G-RISLA-----GLSLAKCEYLADAI 459 (467)
Q Consensus 440 --------g-Ris~~-----~~~~~~i~~~~~~l 459 (467)
| ||+.. ++.+++++++.+.|
T Consensus 366 d~~~~~~sGlRlGT~~lT~rG~~e~dm~~iA~~I 399 (399)
T PF00464_consen 366 DRSPFVPSGLRLGTPALTRRGMKEEDMKEIAELI 399 (399)
T ss_dssp TSTTTT-SEEEEESHHHHHTT--HHHHHHHHHHH
T ss_pred CCCCCCCCEEEECCHHHHhCCCCHHHHHHHHhhC
Confidence 3 88743 34677777776543
No 297
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.54 E-value=1.8e-11 Score=124.98 Aligned_cols=343 Identities=14% Similarity=0.071 Sum_probs=187.1
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCC-CCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCc
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 160 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~-~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~gg 160 (467)
+.+.+|+..|.--..-|. -.|.|.+++.+.++... ...|.+.....+|-+.+++..-.. -+++.+ +++|
T Consensus 81 G~~ylD~~~g~~~~~lGH--~~p~v~~Ai~~ql~~l~~~~~~~~~~~~~~lae~L~~~~p~~------~~~v~f--~~SG 150 (459)
T PRK11522 81 GQEFIDCLGGFGIFNVGH--RNPVVVSAVQNQLAKQPLHSQELLDPLRAMLAKTLAALTPGK------LKYSFF--CNSG 150 (459)
T ss_pred CCEEEECCcCHHhhhcCC--CCHHHHHHHHHHHhhCcccccccCCHHHHHHHHHHHHhCCCC------CCEEEE--eCCc
Confidence 457889877732112232 36788888888775421 122333333344444444442111 247888 9999
Q ss_pred hhHHHHHHHHHHHhCC--C-CEEEEcCCCCcchHHHH-hhCCCCeEE---eeeecCCC--CCCChhhHHHHHHc---CCC
Q 012238 161 TGSLRLAAALIERYFP--G-AKVLISSPTWGNHKNIF-NDARVPWSE---YRYYDPKT--VGLDFEGMIADIKA---APG 228 (467)
Q Consensus 161 t~al~l~~~~l~~~~~--g-d~Vlv~~P~y~~~~~~~-~~~G~~~~~---v~~~~~~~--~~~d~~~l~~~l~~---~~~ 228 (467)
++|.+.+.++...... | .+|+...-+|.+..... ...|-.... .|..+.-. .-.|.+.+++.++. .+.
T Consensus 151 sEAve~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ 230 (459)
T PRK11522 151 TESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALSECKKTGD 230 (459)
T ss_pred hHHHHHHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCCCCHHHHHHHHHHhhccCC
Confidence 9999998665544432 3 36888888887654322 222211110 11100000 01367788887753 223
Q ss_pred CcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcc
Q 012238 229 GSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG 307 (467)
Q Consensus 229 ~~~~i~i~~p~NPTG~~-~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 307 (467)
+...+++...+.-.|.. .+.+.++++.++|++||+++|+||+..+|.-.+ ..+.... ..-.++++ +++|.+|
T Consensus 231 ~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG---~~~a~e~-~gv~PDiv---t~gK~lg 303 (459)
T PRK11522 231 DVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTG---KMFACEH-ENVQPDIL---CLAKALG 303 (459)
T ss_pred cEEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCccc---hhhhhhc-cCCCCCEE---Eechhhh
Confidence 44566666555556765 467789999999999999999999987663211 1122111 11123433 7799998
Q ss_pred cCC-CccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHH
Q 012238 308 LYA-ERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKN 386 (467)
Q Consensus 308 ~~G-~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~ 386 (467)
.| +.+|.++ ..+++.+. +.. ....-..+.+.++++..++.+.|+. + ++ +...++.++
T Consensus 304 -gG~~Pigav~---~~~~i~~~--------~~~--~~~~~~~T~~gnp~~~Aaala~L~~--i----~~--~~l~~~~~~ 361 (459)
T PRK11522 304 -GGVMPIGATI---ATEEVFSV--------LFD--NPFLHTTTFGGNPLACAAALATINV--L----LE--QNLPAQAEQ 361 (459)
T ss_pred -CCCccceeEE---EcHHHHHH--------hcc--CCcccCCCCCCCHHHHHHHHHHHHH--H----hc--chHHHHHHH
Confidence 67 5889985 55666665 211 0111112223345555555444431 1 10 123455555
Q ss_pred HHHHHHHHhhhccC--CCCCcccccCCcceEEecCC--C---HHHHHHHHHcccEEEeCC---C---eEEec-cCChhhH
Q 012238 387 VRQKLFDSLSAKDK--SGKDWSFILRQIGMFSFTGL--N---KAQSDNMTNKWHVYMTKD---G---RISLA-GLSLAKC 452 (467)
Q Consensus 387 ~r~~l~~~l~~~~g--~~~~~~~~~~~~g~f~~~~l--~---~~~~~~ll~~~gI~v~~g---g---Ris~~-~~~~~~i 452 (467)
+-++|.+.|+ ++. .|..+..+... |.++-+.+ + ..+...+++ +||++.+. + ||... .++++++
T Consensus 362 ~g~~l~~~L~-~l~~~~~~~i~~VrG~-Gl~~giel~~~~~~~~i~~~l~~-~Gvl~~~~~~~~~~lr~~Ppl~~t~~~i 438 (459)
T PRK11522 362 KGDYLLDGFR-QLAREYPDLVQEARGK-GMLMAIEFVDNEIGYNFASEMFR-QRVLVAGTLNNAKTIRIEPPLTLTIEQC 438 (459)
T ss_pred HHHHHHHHHH-HHHHhCCCceeeEEec-eeEEEEEecCchHHHHHHHHHHH-CCeEEEecCCCCCEEEEECCccCCHHHH
Confidence 5566666665 442 11101112233 33332322 1 233455555 69999765 2 66654 2488999
Q ss_pred HHHHHHHHHHHHhc
Q 012238 453 EYLADAIIDSYHNV 466 (467)
Q Consensus 453 ~~~~~~l~~~l~~~ 466 (467)
++++++|.++++++
T Consensus 439 d~~l~~l~~~l~~~ 452 (459)
T PRK11522 439 EQVLKAARKALAAM 452 (459)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998754
No 298
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.53 E-value=1.1e-11 Score=123.04 Aligned_cols=341 Identities=13% Similarity=0.080 Sum_probs=196.4
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcC--CCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCC
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG--ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 159 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~--~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g 159 (467)
+...|||..|..--.-|. -+|.|.+|+++.++.- ....|.+....-++-+.+.+.+-+. ..+.+++ +++
T Consensus 55 G~~ylDf~sgi~v~~~GH--~hP~Vv~Av~~q~~~~~h~~~~~~~~e~~v~~ae~L~~~~p~~-----~~~~~~f--~~s 125 (447)
T COG0160 55 GNEYLDFLSGIAVLNLGH--NHPRVVEAVKRQLAKLNHTHTRDLYYEPYVELAEKLTALAPGS-----GLKKVFF--GNS 125 (447)
T ss_pred CCEEEEcccCcchhccCC--CCHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHhCCcc-----cCCeEEe--cCC
Confidence 457899999754222233 3688888888876442 2234434333334444444443221 2457888 999
Q ss_pred chhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHH-Hh-------------hCCCCeEEeeeecCCC--CCC--------C
Q 012238 160 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI-FN-------------DARVPWSEYRYYDPKT--VGL--------D 215 (467)
Q Consensus 160 gt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~-~~-------------~~G~~~~~v~~~~~~~--~~~--------d 215 (467)
|++|.+.+.++.........|+...-.|..-... +. .....+..+|+.+.-. ++. .
T Consensus 126 GaeA~E~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~ 205 (447)
T COG0160 126 GAEAVEAAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDA 205 (447)
T ss_pred cHHHHHHHHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHH
Confidence 9999999977665555667899988888643221 11 1112355555532211 111 2
Q ss_pred hhhHHHHHHc---CCCCcEEEEeCCCCCCCCCCCC-HHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHh
Q 012238 216 FEGMIADIKA---APGGSFILLHGCAHNPTGIDPT-PEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT 291 (467)
Q Consensus 216 ~~~l~~~l~~---~~~~~~~i~i~~p~NPTG~~~~-~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~ 291 (467)
.+.++..+.. .+.+...+++-.-+.-.|.+.+ .+-++++.++|++||+++|+||+-.++.-.+ .-|....+ .
T Consensus 206 ~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG---~~fa~E~~-g 281 (447)
T COG0160 206 LEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTG---KMFAFEHF-G 281 (447)
T ss_pred HHHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCccc---cchhhhhc-C
Confidence 2334443332 2456777888888888887665 4568999999999999999999977776432 33333222 1
Q ss_pred cCCeEEEEecCccCcccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHH
Q 012238 292 RGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFD 371 (467)
Q Consensus 292 ~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~ 371 (467)
-.+++| +++|.+| .|+.+|.++ ..+++.+. ....... +...+.++..++.+.|+- +
T Consensus 282 v~PDiv---t~aK~ig-~G~Pl~avv---~r~ei~~~------------~~g~~~~-Tf~GNpva~Aaa~AvL~v--i-- 337 (447)
T COG0160 282 VEPDIV---TLAKSLG-GGLPLSAVV---GRAEIMDW------------PPGGHGG-TFGGNPVACAAALAVLDV--I-- 337 (447)
T ss_pred CCCCEE---Eeccccc-CCCceeEEe---ccHHhccc------------CCcccCC-CCCcCHHHHHHHHHHHHH--H--
Confidence 123444 4689999 599999995 77766543 2111222 344555565666555531 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCC-cccccCCcceEEecCC---------CH----HHHHHHHHcccEEEe
Q 012238 372 EWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKD-WSFILRQIGMFSFTGL---------NK----AQSDNMTNKWHVYMT 437 (467)
Q Consensus 372 ~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~~~~-~~~~~~~~g~f~~~~l---------~~----~~~~~ll~~~gI~v~ 437 (467)
+++ ...++.++.-+++.+.|+ ++.-... +--+.. -|+++-+.+ +. ..+.++++ +|+.+.
T Consensus 338 -e~e---~L~~~a~~~G~~l~~~L~-~l~~~~~~IgdVRG-~Glm~giE~v~d~~t~~p~~~~~~~i~~~~~~-~Glil~ 410 (447)
T COG0160 338 -EEE---NLLERAAELGEYLRDRLE-ELQEKHPLIGDVRG-LGLMIGVELVKDRDTKEPDAELAAKIVARAFE-RGLLLL 410 (447)
T ss_pred -HHc---cHHHHHHHHHHHHHHHHH-HHHhhcCceecccc-cceEEEEEEecCCCCCCCCHHHHHHHHHHHHH-cCCEEe
Confidence 111 333444444444444444 3211000 111122 244443311 22 23556665 598888
Q ss_pred CCC------eEEec-cCChhhHHHHHHHHHHHHHhc
Q 012238 438 KDG------RISLA-GLSLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 438 ~gg------Ris~~-~~~~~~i~~~~~~l~~~l~~~ 466 (467)
.+| ||... .+++++++.+++.|.+++++.
T Consensus 411 ~~G~~~nviRi~PPL~is~e~~d~~l~il~~al~~~ 446 (447)
T COG0160 411 TCGPHGNVLRILPPLTISDEELDEGLDILEEALKEA 446 (447)
T ss_pred ccCCCCcEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 876 77754 348899999999999999865
No 299
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.52 E-value=4.9e-11 Score=120.90 Aligned_cols=333 Identities=14% Similarity=0.081 Sum_probs=183.1
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcC-CCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCc
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 160 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~-~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~gg 160 (467)
+.+.+|+..|.--..-|. -.|.|.+++.+.+... ....|.......++-+.+++..... -+++++ +++|
T Consensus 74 G~~ylD~~~g~~~~~lGh--~hp~v~~Av~~ql~~l~~~~~~~~~~~~~~lAe~L~~~~p~~------~~~v~f--~~SG 143 (442)
T TIGR03372 74 GNEFIDCLGGFGIFNVGH--RNPNVIAAVENQLAKQPLHSQELLDPLRALLAKTLAALTPGK------LKYSFF--CNSG 143 (442)
T ss_pred CCEEEECCccHHhhhcCC--CCHHHHHHHHHHHHhCCCcccccCCHHHHHHHHHHHHhCCCC------cCEEEE--eCCc
Confidence 457899977732111232 3677888888877532 2223333333344445555442111 246888 9999
Q ss_pred hhHHHHHHHHHHHhC--CC-CEEEEcCCCCcchHHHHh-hCCCC------------eEEeeeecCCCCCCChhhHHHHHH
Q 012238 161 TGSLRLAAALIERYF--PG-AKVLISSPTWGNHKNIFN-DARVP------------WSEYRYYDPKTVGLDFEGMIADIK 224 (467)
Q Consensus 161 t~al~l~~~~l~~~~--~g-d~Vlv~~P~y~~~~~~~~-~~G~~------------~~~v~~~~~~~~~~d~~~l~~~l~ 224 (467)
++|.+.+.++..... .| .+|+....+|.+...... ..|-. +..+|. .|.+.+++.++
T Consensus 144 sEA~e~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~-------~d~~~~~~~l~ 216 (442)
T TIGR03372 144 TESVEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAF-------GDIEAMLKALN 216 (442)
T ss_pred hHHHHHHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCC-------CCHHHHHHHHH
Confidence 999999866654443 23 578988988876543222 21211 112221 36777777775
Q ss_pred c---CCCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEe
Q 012238 225 A---APGGSFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQ 300 (467)
Q Consensus 225 ~---~~~~~~~i~i~~p~NPTG~~~-~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 300 (467)
. .+.+...+++..-+.--|... +++.++++.++|++||+++|+||+..+|.-.+ ..+.... ..-.++++
T Consensus 217 ~~~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG---~~~a~e~-~gv~PDiv--- 289 (442)
T TIGR03372 217 ECKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTG---KMFACEH-EGVQPDIL--- 289 (442)
T ss_pred HHhcCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCccc---cchhhhh-cCCCCCee---
Confidence 3 234456666665555556655 67889999999999999999999987764221 1222211 12223433
Q ss_pred cCccCcccCC-CccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHH
Q 012238 301 SYSKNLGLYA-ERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEM 379 (467)
Q Consensus 301 S~SK~~~~~G-~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~ 379 (467)
+++|.+| .| +.+|.++ ..+++.+. +.. ....-..+.+.++++..++.+.|+- + ++ +.
T Consensus 290 t~gK~lg-~G~~Pigavv---~~~~i~~~--------~~~--~~~~~~~T~~gnp~~~Aaa~a~L~~--i----~~--~~ 347 (442)
T TIGR03372 290 CLAKALG-GGVMPIGATI---ATEAVFSV--------LFD--NPFLHTTTFGGNPLACAAALATINE--L----LE--KN 347 (442)
T ss_pred eehhhhc-CCcccceEEE---ecHHHHHh--------hhc--cCccccCCCCCCHHHHHHHHHHHHH--H----Hh--cc
Confidence 3899998 77 5889985 56777665 211 1111112223345555555554431 1 00 12
Q ss_pred HHHHHHHHHHHHHHHhhhccC--CCCCcccccCCcceEEecCC--C---HHHHHHHHHcccEEEeCC---C---eEEec-
Q 012238 380 MAGRIKNVRQKLFDSLSAKDK--SGKDWSFILRQIGMFSFTGL--N---KAQSDNMTNKWHVYMTKD---G---RISLA- 445 (467)
Q Consensus 380 ~~~~~~~~r~~l~~~l~~~~g--~~~~~~~~~~~~g~f~~~~l--~---~~~~~~ll~~~gI~v~~g---g---Ris~~- 445 (467)
..++.+++-+++.+.|+ ++. .|..+.-+... |.++-+.+ + ..+.+.+++ +||++.+. + ||...
T Consensus 348 l~~~~~~~G~~l~~~L~-~l~~~~~~~i~~vRG~-Gl~~giel~~~~~~~~i~~~l~~-~Gvl~~~~~~~~~~lr~~Ppl 424 (442)
T TIGR03372 348 LPAQAAIKGDFLLDGFQ-QLAAEYPDLIIEARGK-GLLMAIEFRDNEIGYAFAKELFQ-QNILVAGTLNNAKSIRIEPPL 424 (442)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHhCCCceEEEecc-eEEEEEEeCChHHHHHHHHHHHH-CCcEEeecCCCCCEEEEECCc
Confidence 23334444455555554 331 11001112233 33433322 1 233555555 69998753 2 66654
Q ss_pred cCChhhHHHHHHHHHHHH
Q 012238 446 GLSLAKCEYLADAIIDSY 463 (467)
Q Consensus 446 ~~~~~~i~~~~~~l~~~l 463 (467)
.++++++++++++|.+++
T Consensus 425 ~~t~~~id~~~~~l~~~~ 442 (442)
T TIGR03372 425 TITIEQCALVIKAAKDAL 442 (442)
T ss_pred ccCHHHHHHHHHHHHHhC
Confidence 248899999999998864
No 300
>PRK07046 aminotransferase; Validated
Probab=99.51 E-value=4.9e-11 Score=121.59 Aligned_cols=331 Identities=13% Similarity=0.040 Sum_probs=185.5
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCch
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (467)
+.+.|||..|.-...-|. -.|.|.+++.+.++.+....+ +.....++-+.+++.. + .+++.+ +++|+
T Consensus 74 G~~yiD~~~g~g~~~lGh--~~p~i~~Av~~q~~~~~~~~~-~~~~~~~lAe~l~~~~----~----~~~v~F--~nSGt 140 (453)
T PRK07046 74 GHRYDDFCLGDTGAMFGH--SPAPVARALAEQARRGLTTML-PSEDAAWVGEELARRF----G----LPYWQV--ATTAT 140 (453)
T ss_pred CCEEEEecccccccccCC--CCHHHHHHHHHHHHhCCCCCC-CCHHHHHHHHHHHHHh----C----CCEEEE--ECCHH
Confidence 357899977643111222 368888898888876543333 3333444555555542 1 357888 99999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHH--hhCCCCeE------Eee--eec---CCCCCCChhhHHHHHHcCCC
Q 012238 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIF--NDARVPWS------EYR--YYD---PKTVGLDFEGMIADIKAAPG 228 (467)
Q Consensus 162 ~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~--~~~G~~~~------~v~--~~~---~~~~~~d~~~l~~~l~~~~~ 228 (467)
+|...+.++.......++|+...-+|.++.... ...+.+.. .++ ..+ ...+ .|++.+++.+.. .
T Consensus 141 EA~e~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-nd~~~l~~~l~~--~ 217 (453)
T PRK07046 141 DANRFVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVEF-NDLAALEAALAD--G 217 (453)
T ss_pred HHHHHHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeCC-CCHHHHHHHhCC--C
Confidence 999998666544444568999898887763211 10010000 000 000 0011 378899888853 3
Q ss_pred CcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcc
Q 012238 229 GSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG 307 (467)
Q Consensus 229 ~~~~i~i~~p~NPTG~~-~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 307 (467)
+...+++-.-+.-.|.+ .+.+-++++.++|++||+++|+||+.. |..+- ... .....-.++++ .++|.++
T Consensus 218 ~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~t-fr~g~---Gg~--~~~~gv~PDi~---t~gK~lg 288 (453)
T PRK07046 218 DVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHT-ISSGP---GGY--TRAHGLEPDFL---VVGKPIA 288 (453)
T ss_pred CeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcccc-CccCC---cch--hHHhCCCccce---eehhhhc
Confidence 45555554444333544 456789999999999999999999965 43221 111 11112223443 4799999
Q ss_pred cCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhh---------ccCccCCCchHHHHHHHHHhC---ChhhHHHHHH
Q 012238 308 LYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRL---------ARPMYSNPPVHGARIVANVVG---NPALFDEWKA 375 (467)
Q Consensus 308 ~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~---------~~~~~~~~~~~~~~~~~~~L~---~~~~~~~~~~ 375 (467)
.|+.+|.++ +.+++.+. +... ....+.+.+.++..++...|+ ++++
T Consensus 289 -gG~Pi~av~---g~~~i~~~------------~~~~~~~~~~~~~~~~~T~~gnpl~~aa~~a~L~~l~~~~~------ 346 (453)
T PRK07046 289 -GGVPCAVYG---FSAELAER------------AQAAKASAPPGHSGIGTTLSANALAMAAMRATLAEVMTEAA------ 346 (453)
T ss_pred -CCCcceeee---ehHHHHHH------------HhhccccCCCCCceeCCCCcccHHHHHHHHHHHHHHhcccH------
Confidence 789999884 77777766 3211 011122445555555554443 2211
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceE-Eec-C------------CCH----HHHHHHHHcccEEEe
Q 012238 376 EMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMF-SFT-G------------LNK----AQSDNMTNKWHVYMT 437 (467)
Q Consensus 376 ~l~~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~~~g~f-~~~-~------------l~~----~~~~~ll~~~gI~v~ 437 (467)
+++..+.-...++.|.+.+. +.+++. . +...|.++ +.+ + .+. .+...+++ +||++.
T Consensus 347 -~~~~~~~g~~l~~~L~~l~~-~~~~~~--~-v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Gv~~~ 420 (453)
T PRK07046 347 -YAHMLALAARLAAGLRAVIA-RHGLPW--H-VTRVGARVEFQFAPTPPRNGAEAAAALDPELEAALHLYLLN-RGVLIT 420 (453)
T ss_pred -HHHHHHHHHHHHHHHHHHHH-hCCCCe--E-EEEeCcEEEEEEeCCCCCCHHHHhcccCHHHHHHHHHHHHH-CCCEEe
Confidence 22222222223344444444 444321 2 22233333 221 1 011 22345555 599998
Q ss_pred CCC---eEEeccCChhhHHHHHHHHHHHHHhc
Q 012238 438 KDG---RISLAGLSLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 438 ~gg---Ris~~~~~~~~i~~~~~~l~~~l~~~ 466 (467)
+.+ +++.. +++++++++++++.++++++
T Consensus 421 ~~~~~~~~~p~-~t~~did~~~~~~~~~l~~~ 451 (453)
T PRK07046 421 PFHNMMLVCPA-TTAADVDRLVAAFDACLGEL 451 (453)
T ss_pred cccCcEEEeCC-CCHHHHHHHHHHHHHHHHHH
Confidence 865 67765 59999999999999999865
No 301
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.50 E-value=1.5e-11 Score=124.51 Aligned_cols=214 Identities=16% Similarity=0.110 Sum_probs=141.4
Q ss_pred CcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCC-----CcchHHHHHHHHHHHhCCCCcccccCceeeeecC
Q 012238 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLP-----IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGL 158 (467)
Q Consensus 84 ~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~-----~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ 158 (467)
.+||.+--.++++.+.++.++.+.+++.+.+.......|.- ..-...+++.++++++.. ..++ ++
T Consensus 75 ~vinatg~v~~tNlg~s~l~~~vieAv~~~~~~y~~l~~~l~~g~~g~r~~~le~~lA~l~gae--------~alv--v~ 144 (454)
T TIGR00474 75 RVINATGVVLHTNLGRAPLAEEAIEAVTDAARGYSNLEYDLETGKRGSRYSHVEGLLCELTGAE--------DALV--VN 144 (454)
T ss_pred ceeCCCCcEEeccCCCCCCCHHHHHHHHHHHhcccchhccccccccchHHHHHHHHHHHHhCCC--------cEEE--EC
Confidence 56775543555666666668999999988875422222321 112478889999996543 2344 57
Q ss_pred CchhHHHHHHHHHHHhCCCCEEEEcCCCCcc------hHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEE
Q 012238 159 SGTGSLRLAAALIERYFPGAKVLISSPTWGN------HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFI 232 (467)
Q Consensus 159 ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~------~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~ 232 (467)
+++.|+.++ +..+.+||+|+++...|.. +...++..|+++++++.. ...|+++++++++ +++++
T Consensus 145 sg~aAi~l~---l~~l~~GdeVIvs~~e~v~~ggs~~i~~~~~~~G~~~~~v~~~----~~~~l~dle~aI~---~~T~l 214 (454)
T TIGR00474 145 NNAAAVLLA---LNTLAKGKEVIVSRGELVEIGGSFRIPDVMEQSGAKLVEVGTT----NRTHLKDYEDAIT---ENTAL 214 (454)
T ss_pred CHHHHHHHH---HHHhCCcCEEEECCChhhhhcchhhHHHHHHHcCCEEEEeCCC----CCCCHHHHHHhcC---cCCEE
Confidence 888898886 3557899999999866422 234667889999988763 2357899999887 67889
Q ss_pred EEeCCCCCCC--CC--CCCHHHHHHHHHHHHhcCCeeEEeccCCCCC----CCCCCCChhHHHHHHhcCCeEEEEecCcc
Q 012238 233 LLHGCAHNPT--GI--DPTPEQWEKIADVIQEKNHIPFFDVAYQGFA----SGSLDNDASSVRLFATRGMELLVAQSYSK 304 (467)
Q Consensus 233 i~i~~p~NPT--G~--~~~~~~l~~l~~~~~~~~~~li~Deay~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~S~SK 304 (467)
+++.++.||+ |. ..+ +++|+++|+++|+++++|.....+. ++ .. ..+.+....+.+ -.++++|.+|
T Consensus 215 v~~~h~sN~~~~G~~~~~d---l~~I~~la~~~g~~vivD~~sG~l~~~~~~g-l~-~~p~~~~~~~~G-aDiv~fSg~K 288 (454)
T TIGR00474 215 LLKVHTSNYRIVGFTEEVS---IAELVALGREHGLPVMEDLGSGSLVDLSRYG-LP-DEPTVQEVIAAG-VDLVTFSGDK 288 (454)
T ss_pred EEEEccCcccccCCCCCCC---HHHHHHHHHHcCCeEEEECCCcccccchhcc-CC-CCcccccHhHcC-CCEEEecCcc
Confidence 9999999996 53 344 5678888999999999998632221 11 00 011111122222 3488999999
Q ss_pred CcccCCCccceEEEecCCHHHHhh
Q 012238 305 NLGLYAERIGAMNVVCSSSDLAAR 328 (467)
Q Consensus 305 ~~~~~G~RiG~~~~v~~~~~~~~~ 328 (467)
.++-| ..|+++ +.++.++.
T Consensus 289 ~LgGp--~~G~i~---g~~~~i~~ 307 (454)
T TIGR00474 289 LLGGP--QAGIIV---GKKELIER 307 (454)
T ss_pred ccCCC--eEEEEE---ECHHHHHh
Confidence 98655 368774 66777655
No 302
>PRK15029 arginine decarboxylase; Provisional
Probab=99.50 E-value=6.5e-12 Score=132.98 Aligned_cols=183 Identities=12% Similarity=0.010 Sum_probs=125.0
Q ss_pred CCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCe
Q 012238 122 YLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPW 201 (467)
Q Consensus 122 Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~ 201 (467)
+.|..-+.+..+..|+.++.. .-.++ ++|+|.++..+ +++.+.+||+|+++..|+-.....+...|+.+
T Consensus 201 ~~p~G~I~eAq~~aA~~fgA~-------~t~Fl--vNGST~gn~a~--i~a~~~~gd~Vlv~RN~HKSv~~al~L~ga~P 269 (755)
T PRK15029 201 LDHTGAFGESEKYAARVFGAD-------RSWSV--VVGTSGSNRTI--MQACMTDNDVVVVDRNCHKSIEQGLILTGAKP 269 (755)
T ss_pred CCCCcHHHHHHHHHHHHhCCC-------cEEEE--eCChhHHHHHH--HHHhcCCCCEEEeecccHHHHHHHHHHcCCeE
Confidence 435545677777777775432 34455 79999999876 67788899999999999999999999999999
Q ss_pred EEeeeecCC---CCCCC-----hhhHHHHHHcCCCC-------cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeE
Q 012238 202 SEYRYYDPK---TVGLD-----FEGMIADIKAAPGG-------SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPF 266 (467)
Q Consensus 202 ~~v~~~~~~---~~~~d-----~~~l~~~l~~~~~~-------~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li 266 (467)
++++..-.. -.+++ ++.+++++++.+.. ++++++++|+ =-|++++.+ +|+++|+++++.|+
T Consensus 270 vyl~P~~~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PT-Y~Gv~~di~---~I~~~~h~~~~~ll 345 (755)
T PRK15029 270 VYMVPSRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCT-YDGVCYNAK---EAQDLLEKTSDRLH 345 (755)
T ss_pred EEecccccccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCC-CcceeeCHH---HHHHHHHhcCCeEE
Confidence 998532111 12345 89999999775422 2256665442 238888765 67777999999999
Q ss_pred EeccCCC-CCCCCCCCCh-hHHHH-HHh-cCCeEEEEecCccCcccCCCccceEEEecCC
Q 012238 267 FDVAYQG-FASGSLDNDA-SSVRL-FAT-RGMELLVAQSYSKNLGLYAERIGAMNVVCSS 322 (467)
Q Consensus 267 ~Deay~~-~~~~~~~~~~-~~~~~-~~~-~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~ 322 (467)
+||||.. +.|.+ .... .++.. ... .+..++++.|.+|++ +++.-|.++++.++
T Consensus 346 vDEAhGah~~F~~-~~p~~sa~~~~~~~~~Gad~~vvqStHKtL--~alTQaS~LHv~~~ 402 (755)
T PRK15029 346 FDEAWYGYARFNP-IYADHYAMRGEPGDHNGPTVFATHSTHKLL--NALSQASYIHVREG 402 (755)
T ss_pred EECccccccccCc-cccccccccccccccCCCceEEEEchhhcc--cchhhhhhheeCCC
Confidence 9999853 34432 1111 11100 001 344569999999997 56888888776444
No 303
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.50 E-value=3.3e-13 Score=133.33 Aligned_cols=181 Identities=17% Similarity=0.088 Sum_probs=119.7
Q ss_pred CCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEE
Q 012238 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSE 203 (467)
Q Consensus 124 ~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~ 203 (467)
|..-+.+..+.+|+.++.+ +-.++ ++|+|.++..+ +++.+.|||+|+++..|+-.....+...|+.+++
T Consensus 64 p~G~I~eAe~~aA~~fGAd-------~t~fl--vnGsT~g~~a~--i~a~~~~gd~VLv~RN~HkSv~~alil~ga~Pvy 132 (417)
T PF01276_consen 64 PEGIIKEAEELAARAFGAD-------KTFFL--VNGSTSGNQAM--IMALCRPGDKVLVDRNCHKSVYNALILSGAIPVY 132 (417)
T ss_dssp TBTHHHHHHHHHHHHHTES-------EEEEE--SSHHHHHHHHH--HHHHTTTTCEEEEETT--HHHHHHHHHHTEEEEE
T ss_pred CccHHHHHHHHHHHhcCCC-------eEEEE--ecCchHHHHHH--HHHhcCCCCEEEEcCCcHHHHHHHHHHcCCeEEE
Confidence 4444677777788875432 34555 79999999998 7778899999999999999998999999999999
Q ss_pred eeeecCCC---CCCCh-----hhHHHHHHcCCCCcE--EEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCC
Q 012238 204 YRYYDPKT---VGLDF-----EGMIADIKAAPGGSF--ILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQG 273 (467)
Q Consensus 204 v~~~~~~~---~~~d~-----~~l~~~l~~~~~~~~--~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~ 273 (467)
++..+++. .++++ +.+++++++.+.... ++++++|+ =-|++++.+ +|+++|+++++.|++||||..
T Consensus 133 i~p~~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PT-Y~Gv~~di~---~I~~~~h~~~~~llvDEAhGa 208 (417)
T PF01276_consen 133 IPPEDNEYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPT-YYGVCYDIK---EIAEICHKHGIPLLVDEAHGA 208 (417)
T ss_dssp EEEEE-TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS--TTSEEE-HH---HHHHHHCCTECEEEEE-TT-T
T ss_pred ecCCccccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCC-CCeEEECHH---HHHHHhcccCCEEEEEccccc
Confidence 97652221 24566 999999998754433 34444332 238877755 777779999999999999763
Q ss_pred C-CCCCCCCChhHHHHHHh--cCCeEEEEecCccCcccCCCccceEEEecCCH
Q 012238 274 F-ASGSLDNDASSVRLFAT--RGMELLVAQSYSKNLGLYAERIGAMNVVCSSS 323 (467)
Q Consensus 274 ~-~~~~~~~~~~~~~~~~~--~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~ 323 (467)
. .|.....+. +..-++ ....++++.|..|++ +++.-+.++++..+.
T Consensus 209 h~~F~~lp~~a--~~~gad~~~~~~~~vvqS~HKtL--~altQts~lh~~~~~ 257 (417)
T PF01276_consen 209 HFGFHPLPRSA--LALGADRPNDPGIIVVQSTHKTL--PALTQTSMLHVKGDR 257 (417)
T ss_dssp TGGCSGGGTTC--SSTTSS-CTSBEEEEEEEHHHHS--SS-TT-EEEEEETCC
T ss_pred cccCCCCccch--hhccCccccccceeeeechhhcc--cccccceEEEecCCC
Confidence 3 332111111 100011 223679999999997 678888888766654
No 304
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.49 E-value=2.2e-11 Score=109.79 Aligned_cols=315 Identities=16% Similarity=0.108 Sum_probs=189.1
Q ss_pred hHHHHHHHHHHHhcCCCCcCC--------CCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHh
Q 012238 103 LDVVKKAENLMLERGENKEYL--------PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY 174 (467)
Q Consensus 103 ~~~v~~a~~~~~~~~~~~~Y~--------~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~ 174 (467)
++..++++.+.-+.-....|. ..+-+..|.+.+++++..+ .+-+ |+|+.++-+.+ +-+.+
T Consensus 30 t~eArkal~E~gDGYSvCD~C~~Grldei~kPpI~~F~~dlaeFlg~D--------~~R~--t~GARe~Kfav--Mhal~ 97 (382)
T COG1103 30 TEEARKALLEWGDGYSVCDFCLEGRLDEITKPPIKDFLEDLAEFLGMD--------EVRV--TAGAREAKFAV--MHALC 97 (382)
T ss_pred CHHHHHHHHHhcCCcchhhhhccCccccccCCcHHHHHHHHHHHhCCc--------eeee--cccchhhHHHH--HHHhc
Confidence 677777776654321111121 1223667888999997543 4444 99999999997 55567
Q ss_pred CCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcC----CCCcEEEEeCCCCCCCCCCCCHHH
Q 012238 175 FPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA----PGGSFILLHGCAHNPTGIDPTPEQ 250 (467)
Q Consensus 175 ~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~----~~~~~~i~i~~p~NPTG~~~~~~~ 250 (467)
.+||.|++-+.++....-+++.+|.++..+|-.....+.++++...+.+++. ...+.+.+++++.---| +..+
T Consensus 98 ~~gd~vV~D~~aHYttyvAAEragl~v~eVp~tg~Pey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YG---Nl~D 174 (382)
T COG1103 98 KEGDWVVVDSLAHYTTYVAAERAGLNVAEVPNTGYPEYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYG---NLAD 174 (382)
T ss_pred cCCCEEEEcCcchHHHHHHHHhcCCeEEecCCCCCCceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcC---Cchh
Confidence 7999999988776655567789999999999755557889999988887652 23466777776664444 4566
Q ss_pred HHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecCCHHHHhhhh
Q 012238 251 WEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARCC 330 (467)
Q Consensus 251 l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~ 330 (467)
-++++++|+++|+.++...+|.--... ... .+. ...++++|-.|.++.. -.+|.+. -.+++.+.
T Consensus 175 akkva~ic~e~gvPlllN~AYt~Grmp---vs~------ke~-g~DFiVgSGHKsmAAs-~PiGvl~---~~eE~ae~-- 238 (382)
T COG1103 175 AKKVAKICREYGVPLLLNCAYTVGRMP---VSG------KEI-GADFIVGSGHKSMAAS-APIGVLA---MSEEWAEI-- 238 (382)
T ss_pred hHHHHHHHHHcCCceEeecceeecccc---ccc------ccc-CCCEEEecCccchhcc-CCeeEEe---ehhHHHHH--
Confidence 779999999999999999998633211 111 011 2357799999999854 4688884 56677665
Q ss_pred hhhHHHHHHHHHh---hccCccCCCchHHHHHHHHHhCChhhH---HHHHHHHHHHHHHHHHHHHHHHHHhhhccCC-CC
Q 012238 331 EVAVIQVKSQLKR---LARPMYSNPPVHGARIVANVVGNPALF---DEWKAEMEMMAGRIKNVRQKLFDSLSAKDKS-GK 403 (467)
Q Consensus 331 ~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~L~~~~~~---~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~-~~ 403 (467)
+...-.+ ....-..+....+..++...-+-+... ..|.+++++.+-...+.-+ ..++. ++|. |+
T Consensus 239 ------V~r~Sg~~~~~KEvellGCT~rGapivTlmASfP~V~eRVkrWdeEv~kaR~fv~elEk--igg~~-qlG~rPk 309 (382)
T COG1103 239 ------VLRRSGRAFPKKEVELLGCTVRGAPIVTLMASFPHVVERVKRWDEEVEKARWFVAELEK--IGGVK-QLGERPK 309 (382)
T ss_pred ------HHhhcccccccceeeeecccccCchHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHH--hhhHH-HhCCCCc
Confidence 2221100 001111223333333443333334332 2344444444333333222 12223 3332 11
Q ss_pred Ccccc-------------cCCcceEEecCCCHHHHHHHHHcccEEE-eCCC----eEEeccCChhhHHHHHHHHHHHHHh
Q 012238 404 DWSFI-------------LRQIGMFSFTGLNKAQSDNMTNKWHVYM-TKDG----RISLAGLSLAKCEYLADAIIDSYHN 465 (467)
Q Consensus 404 ~~~~~-------------~~~~g~f~~~~l~~~~~~~ll~~~gI~v-~~gg----Ris~~~~~~~~i~~~~~~l~~~l~~ 465 (467)
.-+.. .+.+||| +-+-|++.||.- .||- .+|..+++.|+++++++++++++++
T Consensus 310 ~HdLm~Fetp~f~eIakk~~r~gyF---------lY~ELK~RgI~GI~~G~Tk~~K~svyGl~~Eqve~V~~afkeI~ek 380 (382)
T COG1103 310 NHDLMKFETPVFHEIAKKHKRKGYF---------LYEELKKRGIHGIQPGQTKYFKLSVYGLSWEQVEYVVDAFKEIAEK 380 (382)
T ss_pred ccceeeecCchHHHHHHhCcCCcee---------eHHHHHhcCccccccCceeEEEEEeecCCHHHHHHHHHHHHHHHHh
Confidence 10000 1122222 233445568764 4443 7788788999999999999999887
Q ss_pred c
Q 012238 466 V 466 (467)
Q Consensus 466 ~ 466 (467)
.
T Consensus 381 y 381 (382)
T COG1103 381 Y 381 (382)
T ss_pred c
Confidence 5
No 305
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.49 E-value=5.3e-13 Score=127.49 Aligned_cols=200 Identities=19% Similarity=0.073 Sum_probs=140.7
Q ss_pred hHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEE
Q 012238 103 LDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLI 182 (467)
Q Consensus 103 ~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv 182 (467)
.|.+.+++.+.. .+. ..|.......++++.+++++... ..++ +.+||.+..++ +...+.|++.|++
T Consensus 8 ~~~m~~a~~~a~-~gd-~~Yg~D~~~~~l~~~i~~l~g~e--------~a~f--~~sGT~An~~a--l~~~~~~~~~vi~ 73 (290)
T PF01212_consen 8 TPAMLEAMAAAN-VGD-DAYGEDPTTARLEERIAELFGKE--------AALF--VPSGTMANQLA--LRAHLRPGESVIC 73 (290)
T ss_dssp -HHEEHHHHHTT-SB--CCTTSSHHHHHHHHHHHHHHTSS--------EEEE--ESSHHHHHHHH--HHHHHHTTEEEEE
T ss_pred CHHHHHHHHccc-cCC-cccCCChhHHHHHHHHHHHcCCC--------EEEE--eCCCChHHHHH--HHHHHhcCCceec
Confidence 677888885543 343 36998899999999999996542 3445 78999999998 4444579999999
Q ss_pred cCCCCcc---hHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHc---CCCCcEEEEeCCCCCCC-CCCCCHHHHHHHH
Q 012238 183 SSPTWGN---HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKA---APGGSFILLHGCAHNPT-GIDPTPEQWEKIA 255 (467)
Q Consensus 183 ~~P~y~~---~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~---~~~~~~~i~i~~p~NPT-G~~~~~~~l~~l~ 255 (467)
..+++.. ........|++++.++.. +++.+|++++++.+.. +..++.+|.+.+++|-. |++++.+++++|.
T Consensus 74 ~~~aHi~~~E~ga~~~~~G~~~~~l~~~--~~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~ 151 (290)
T PF01212_consen 74 ADTAHIHFDETGAIEELSGAKLIPLPSD--DDGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAIS 151 (290)
T ss_dssp ETTEHHHHSSTTHHHHHTTCEEEEEBEC--TGTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHH
T ss_pred cccceeeeeccchhhHhcCcEEEECCCc--ccCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHH
Confidence 9987642 222335689999999873 2367999999999986 23578899999999875 8899999999999
Q ss_pred HHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecCCHHHHhh
Q 012238 256 DVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAAR 328 (467)
Q Consensus 256 ~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~ 328 (467)
++|++||+.++.|.+--.-... .....++.+.. .-..+..|++|.+++++ |.++ +.++++++.
T Consensus 152 ~~a~~~gl~lhmDGARl~~a~~---~~~~~~~e~~~--~~D~v~~~~tK~~g~~~---Gavl--~~~~~~i~~ 214 (290)
T PF01212_consen 152 ELAREHGLPLHMDGARLANAAA---ALGVSLAEIAA--GADSVSFGGTKNGGAPG---GAVL--AGNKEFIAK 214 (290)
T ss_dssp HHHHHHT-EEEEEETTHHHHHC---HHHHHHHHHHT--TSSEEEEETTSTT-SSS---EEEE--EESHHHHHH
T ss_pred HHHHhCceEEEEehhhHHHhhh---cccccHHHHhh--hCCEEEEEEEccccccc---ceEE--EechHHHHH
Confidence 9999999999999983221110 01113333332 23466778999999775 7775 588887766
No 306
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.48 E-value=4.7e-11 Score=120.86 Aligned_cols=341 Identities=10% Similarity=0.004 Sum_probs=183.7
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCch
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (467)
+...||+..|..-..-|. -.|.|.+++.+.++......+. .-..+.+..+++.|...... .-+.+.+ +++|+
T Consensus 42 G~~ylD~~~g~~~~~lGh--~~p~i~~Ai~~q~~~~~~~~~~--~~~~~~~~~la~~L~~~~p~--~~~~v~f--~~SGs 113 (428)
T PRK07986 42 GRRLVDGMSSWWAAIHGY--NHPQLNAAMKSQIDAMSHVMFG--GITHPPAIELCRKLVAMTPQ--PLECVFL--ADSGS 113 (428)
T ss_pred CCEEEEcchhHHhhcCCC--CCHHHHHHHHHHHhhcCCcccc--ccCCHHHHHHHHHHHhhCCC--CcCEEEE--eCCcH
Confidence 457899988753112232 3578888888877542111110 00112334445444332211 1257888 99999
Q ss_pred hHHHHHHHHHHHh-----CCCCEEEEcCCCCcchHHHH-hhCCC-------------CeEEeeeecCC---CC-CCChhh
Q 012238 162 GSLRLAAALIERY-----FPGAKVLISSPTWGNHKNIF-NDARV-------------PWSEYRYYDPK---TV-GLDFEG 218 (467)
Q Consensus 162 ~al~l~~~~l~~~-----~~gd~Vlv~~P~y~~~~~~~-~~~G~-------------~~~~v~~~~~~---~~-~~d~~~ 218 (467)
+|.+.+.++.... ....+|+....+|.+..... ...|- .+..++..... .+ .-|++.
T Consensus 114 EAve~AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~ 193 (428)
T PRK07986 114 VAVEVAMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIAP 193 (428)
T ss_pred HHHHHHHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCcccchhhHHHHHHH
Confidence 9999986655444 12358999999887643221 11111 11222221000 00 125677
Q ss_pred HHHHHHcCCCCcEEEEeCC-CCCCCCC-CCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeE
Q 012238 219 MIADIKAAPGGSFILLHGC-AHNPTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMEL 296 (467)
Q Consensus 219 l~~~l~~~~~~~~~i~i~~-p~NPTG~-~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (467)
+++.++..+.+..++++-. .+.-.|. .++++.+++|.++|++||+++|+||+..++...+ ..+.. ....-.+++
T Consensus 194 l~~~l~~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG---~~fa~-~~~gv~PDi 269 (428)
T PRK07986 194 FARLMAAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTG---KLFAC-EHAGIAPDI 269 (428)
T ss_pred HHHHHHhCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCC---Ceeee-cccCCCCCE
Confidence 8888865444555555544 2444465 4567899999999999999999999987763221 11111 111112333
Q ss_pred EEEecCccCcccCC-CccceEEEecCCHHHHhhhhhhhHHHHHHHHHhh-----ccCccCCCchHHHHHHHHHhCChhhH
Q 012238 297 LVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRL-----ARPMYSNPPVHGARIVANVVGNPALF 370 (467)
Q Consensus 297 i~~~S~SK~~~~~G-~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~~~~~~~L~~~~~~ 370 (467)
+ .++|.++ .| +.+|.++ .++++.+. +... ....+.+.++++..++...|+. +
T Consensus 270 ~---t~gK~l~-gG~~p~~av~---~~~~i~~~------------~~~~~~~~~~~~~T~~g~p~~~aaa~a~L~~--i- 327 (428)
T PRK07986 270 L---CLGKALT-GGTMTLSATL---TTREVAET------------ISNGEAGCFMHGPTFMGNPLACAVANASLSL--L- 327 (428)
T ss_pred E---Eechhhh-CCcccCcchh---chHHHHHH------------hhcCCCCccccCCCCCcCHHHHHHHHHHHHH--H-
Confidence 4 4899997 67 4777773 67777776 4321 1112223445555555544431 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhccC-CCCCcccccCCcceEEecCC----CHHH-HHHHHHcccEEEeCCC---e
Q 012238 371 DEWKAEMEMMAGRIKNVRQKLFDSLSAKDK-SGKDWSFILRQIGMFSFTGL----NKAQ-SDNMTNKWHVYMTKDG---R 441 (467)
Q Consensus 371 ~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g-~~~~~~~~~~~~g~f~~~~l----~~~~-~~~ll~~~gI~v~~gg---R 441 (467)
++ ++..++.+++-+++.+.|+ ++. .+. +..+... |.++-+.+ .... .+.++ ++||++.+.| |
T Consensus 328 ---~~--~~~~~~~~~~g~~l~~~l~-~l~~~~~-i~~vRg~-Gl~~~ve~~~~~~~~~~~~~l~-~~Gl~~~~~g~~i~ 398 (428)
T PRK07986 328 ---ES--GDWQQQVAAIEAQLREELA-PLRDAPM-VADVRVL-GAIGVVETTRPVNMAALQRFFV-EQGVWIRPFGKLIY 398 (428)
T ss_pred ---Hh--CCHHHHHHHHHHHHHHHHH-HHhcCCC-EEeEecc-ceEEEEEeCCcccHHHHHHHHH-HCCcEEEecCCEEE
Confidence 11 1234455555555566665 431 110 1112222 33322212 2233 44554 4699999877 6
Q ss_pred EEec-cCChhhHHHHHHHHHHHHHh
Q 012238 442 ISLA-GLSLAKCEYLADAIIDSYHN 465 (467)
Q Consensus 442 is~~-~~~~~~i~~~~~~l~~~l~~ 465 (467)
+.-. .++++++++++++|.+++++
T Consensus 399 ~~Ppl~it~~ei~~~~~~l~~~l~~ 423 (428)
T PRK07986 399 LMPPYIILPEQLQRLTAAVNRAVQD 423 (428)
T ss_pred EeCCCCCCHHHHHHHHHHHHHHHhh
Confidence 6432 23889999999999999864
No 307
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.47 E-value=1.5e-10 Score=117.28 Aligned_cols=341 Identities=11% Similarity=0.015 Sum_probs=186.1
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCC--CcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCC
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGEN--KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 159 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~--~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g 159 (467)
+...+|+..|.--..-|. -.|.|.+++.+.++.... ..+.......+|-+.+++.+-. .-+++.+ +++
T Consensus 43 G~~ylD~~~g~~~~~lGh--~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~------~~~~v~f--~~s 112 (429)
T PRK06173 43 GRRLIDGMSSWWAALHGY--NHPRLNAAATNQLAKMSHIMFGGFTHEPAVELAQKLLEILPP------SLNKIFF--ADS 112 (429)
T ss_pred CCEEEEccchHHhccCCC--CCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHhhCCC------CcCEEEE--eCC
Confidence 457899987743111122 257788888877754211 1111233334444555544211 1358888 999
Q ss_pred chhHHHHHHHHHHHhC-----CC-CEEEEcCCCCcchHH-HHhhCCC-------------CeEEeeeecCCCCC-----C
Q 012238 160 GTGSLRLAAALIERYF-----PG-AKVLISSPTWGNHKN-IFNDARV-------------PWSEYRYYDPKTVG-----L 214 (467)
Q Consensus 160 gt~al~l~~~~l~~~~-----~g-d~Vlv~~P~y~~~~~-~~~~~G~-------------~~~~v~~~~~~~~~-----~ 214 (467)
|++|.+.+.++..... +| .+|+....+|.+... .+...|- .+..+|.... .+. -
T Consensus 113 GseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~ 191 (429)
T PRK06173 113 GSVAVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPSI-KFGEEWNDE 191 (429)
T ss_pred chHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCCCc-ccchhHHHH
Confidence 9999999866544431 33 578888888876421 1111110 1122222100 000 1
Q ss_pred ChhhHHHHHHcCCCCcEEEEeCCC-CCCCCCC-CCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhc
Q 012238 215 DFEGMIADIKAAPGGSFILLHGCA-HNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR 292 (467)
Q Consensus 215 d~~~l~~~l~~~~~~~~~i~i~~p-~NPTG~~-~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~ 292 (467)
+++.+++.+...+.+...+++... +.-.|.. ++++.+++|.++|++||+++|+||+..++.-.+ ..+... ...-
T Consensus 192 ~l~~l~~~i~~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG---~~~a~~-~~gv 267 (429)
T PRK06173 192 AIEPLQDLLEQKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGRTG---KLFALE-HAGV 267 (429)
T ss_pred HHHHHHHHHHhCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcCCCcCC---cchHHH-hcCC
Confidence 356677777654455666665542 6666765 688899999999999999999999987763221 121121 1122
Q ss_pred CCeEEEEecCccCcccCCC-ccceEEEecCCHHHHhhhhhhhHHHHHHHHHh-----hccCccCCCchHHHHHHHHHhCC
Q 012238 293 GMELLVAQSYSKNLGLYAE-RIGAMNVVCSSSDLAARCCEVAVIQVKSQLKR-----LARPMYSNPPVHGARIVANVVGN 366 (467)
Q Consensus 293 ~~~~i~~~S~SK~~~~~G~-RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~~~~~~~L~~ 366 (467)
.++++ + |+|.++ .|. -++.++ ..+++.+. +.. .....+...++++..++...|+-
T Consensus 268 ~PDiv-~--~gK~l~-gG~~p~~a~~---~~~~i~~~------------~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~ 328 (429)
T PRK06173 268 VPDIM-C--IGKALT-GGYLTLSATI---TTEAIAQT------------ICSGEAKCFMHGPTFMANPLACAIAAESIRL 328 (429)
T ss_pred CCCEE-E--eehhhh-CCccccceEE---ecHHHHHH------------HhcCCCCccccCCCCCcCHHHHHHHHHHHHH
Confidence 23433 3 899997 673 567764 66776665 321 11111223344555555544421
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-CCCCCcccccCCcceE-EecCC--CHHHHHHHHHcccEEEeCCC--
Q 012238 367 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD-KSGKDWSFILRQIGMF-SFTGL--NKAQSDNMTNKWHVYMTKDG-- 440 (467)
Q Consensus 367 ~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~-g~~~~~~~~~~~~g~f-~~~~l--~~~~~~~ll~~~gI~v~~gg-- 440 (467)
+ ++ +...++++++-++|.+.|+ ++ +.+. +..+...|-+. +.++- ....+.+.+.++||++.+.|
T Consensus 329 --i----~~--~~~~~~~~~~g~~l~~~L~-~~~~~~~-v~~vRg~Gl~~~iel~~~~~~~~i~~~l~e~Gi~v~~~g~~ 398 (429)
T PRK06173 329 --L----LE--SPWQQNIQRIEAQLKQELA-PAAEFDS-VAEVRVLGAIGVVEMKEPVNMATLQPRFVEHGIWVRPFGKL 398 (429)
T ss_pred --H----Hh--CCHHHHHHHHHHHHHHHHH-HhhcCCC-eeeeeccceEEEEEeCCcccHHHHHHHHHHCCeEEEecCCE
Confidence 1 11 1234555556666666666 43 2110 11112233222 11221 22333333444699999876
Q ss_pred -eEEec-cCChhhHHHHHHHHHHHHHhc
Q 012238 441 -RISLA-GLSLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 441 -Ris~~-~~~~~~i~~~~~~l~~~l~~~ 466 (467)
||.-. .++++++++++++|.+++.++
T Consensus 399 l~~~Ppl~it~~ei~~~~~~l~~~l~~~ 426 (429)
T PRK06173 399 VYIMPPFIISPDELSQLTSGLLRVLKQE 426 (429)
T ss_pred EEEeCCccCCHHHHHHHHHHHHHHHHHH
Confidence 77643 248899999999999998764
No 308
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.47 E-value=1.6e-10 Score=117.94 Aligned_cols=340 Identities=10% Similarity=-0.001 Sum_probs=186.4
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCC---CcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecC
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGEN---KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGL 158 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~---~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ 158 (467)
+.+.||+..|..-..-|. -.|.|.+++.+.++.... ..| +..-..+|-+.+++.. +.. -+++.+ ++
T Consensus 53 G~~ylD~~~g~~~~~lGh--~~p~v~~Ai~~ql~~~~~~~~~~~-~~~~~~~lAe~L~~~~----p~~--~~~v~f--~~ 121 (453)
T PRK06943 53 GRRYLDAISSWWVNLFGH--ANPRINAALKDQLDTLEHAMLAGC-THEPAIELAERLAALT----GGT--LGHAFF--AS 121 (453)
T ss_pred CCEEEEcchHHHHhcCCC--CCHHHHHHHHHHHHhcCCcccccc-CCHHHHHHHHHHHHhC----CCC--CCEEEE--eC
Confidence 457899987743122233 367888888887754210 112 2222233444444432 111 147888 99
Q ss_pred CchhHHHHHHHHHHHh-----CC-CCEEEEcCCCCcchHH-HHhhCCC------------CeEEeeeecCCC--CC----
Q 012238 159 SGTGSLRLAAALIERY-----FP-GAKVLISSPTWGNHKN-IFNDARV------------PWSEYRYYDPKT--VG---- 213 (467)
Q Consensus 159 ggt~al~l~~~~l~~~-----~~-gd~Vlv~~P~y~~~~~-~~~~~G~------------~~~~v~~~~~~~--~~---- 213 (467)
+|++|.+.+.++.... .+ ..+|+...-+|..... .+...|- .+..++..+... ..
T Consensus 122 sGseAve~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 201 (453)
T PRK06943 122 DGASAVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGETAA 201 (453)
T ss_pred CCHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCccccccCCCHH
Confidence 9999999985554222 12 3589999988876532 1211110 122232211100 00
Q ss_pred ----CChhhHHHHHHcCCCCcEEEEeCC-CCCCCCC-CCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHH
Q 012238 214 ----LDFEGMIADIKAAPGGSFILLHGC-AHNPTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVR 287 (467)
Q Consensus 214 ----~d~~~l~~~l~~~~~~~~~i~i~~-p~NPTG~-~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~ 287 (467)
-+++.+++.+...+++...+++-. .+.-.|. .++.+.++++.++|++||+++|.||+..+|.-.+ ..+..
T Consensus 202 ~~~~~~~~~l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG---~~fa~- 277 (453)
T PRK06943 202 DVAARALADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRTG---TFFAC- 277 (453)
T ss_pred HHHHHHHHHHHHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCCc---chhHH-
Confidence 134677777765445556666554 2555666 4678889999999999999999999988884221 12222
Q ss_pred HHHhcCCeEEEEecCccCcccCC-CccceEEEecCCHHHHhhhhhhhHHHHHHHHHh------hccCccCCCchHHHHHH
Q 012238 288 LFATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKR------LARPMYSNPPVHGARIV 360 (467)
Q Consensus 288 ~~~~~~~~~i~~~S~SK~~~~~G-~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~------~~~~~~~~~~~~~~~~~ 360 (467)
....-.++++++ +|.++ .| +.+|.++ ..+++.+. +.. .....+.+.+.++..++
T Consensus 278 ~~~gv~PDivt~---gKgl~-gG~~Pi~av~---~~~ei~~~------------~~~~~~~~~~~~~~T~~gnpl~~aaa 338 (453)
T PRK06943 278 EQAGVWPDFLCL---SKGIS-GGYLPLSLVL---SRDAIFAA------------FYDDDVTRGFLHSHSYTGNPLACRAA 338 (453)
T ss_pred HhCCCCCCeEee---ehhhc-cCcccceEEE---EcHHHHHh------------hcccCccCCccCCCCCCCCHHHHHHH
Confidence 112223455543 89998 78 5889885 67777665 321 01112333455555555
Q ss_pred HHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC-CCCCcccccCCcceEE-ec--CCC------HHHHHHHHH
Q 012238 361 ANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK-SGKDWSFILRQIGMFS-FT--GLN------KAQSDNMTN 430 (467)
Q Consensus 361 ~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g-~~~~~~~~~~~~g~f~-~~--~l~------~~~~~~ll~ 430 (467)
.+.|+- + ++ +...++.+++-+++.+.|+ ++. .+. +..+...|-++. .+ +.+ ..+...+++
T Consensus 339 ~a~L~~--i----~~--~~l~~~~~~~G~~l~~~L~-~l~~~~~-v~~vrG~Gl~~gvel~~~~~~~~~~~~~i~~~~~~ 408 (453)
T PRK06943 339 LATLDL--F----AE--DDVLARNARKSARLRAALA-PLAAHPQ-VRHLRQRGTIFAFDVALDGDAARTFSRRFFEAALE 408 (453)
T ss_pred HHHHHH--H----Hh--cCHHHHHHHHHHHHHHHHH-HHhcCCC-EEeEeccccEEEEEEccCCCcchHHHHHHHHHHHH
Confidence 555431 1 10 1233444444555555555 431 111 222333333321 11 111 123445554
Q ss_pred cccEEEeCCC---eEEec-cCChhhHHHHHHHHHHHHHhc
Q 012238 431 KWHVYMTKDG---RISLA-GLSLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 431 ~~gI~v~~gg---Ris~~-~~~~~~i~~~~~~l~~~l~~~ 466 (467)
+||++.+.| ||+.. .++++++++++++|.++++++
T Consensus 409 -~Gll~~~~g~~l~~~Ppl~it~~eid~~~~~l~~al~~~ 447 (453)
T PRK06943 409 -RELLLRPIGTTVYLMPPYVLDDDEIAWLAERTRATLDAT 447 (453)
T ss_pred -CCcEEEecCCEEEEeCCCcCCHHHHHHHHHHHHHHHHHH
Confidence 699998866 77622 238899999999999998764
No 309
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.47 E-value=2.3e-10 Score=116.83 Aligned_cols=338 Identities=12% Similarity=0.042 Sum_probs=181.9
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCC--CCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCC
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE--NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 159 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~--~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g 159 (467)
+...||+..|..-..-|. -.|.|.+++.+.++... ...|.+.....+|-+.+++.... ..+++.+ +++
T Consensus 52 G~~ylD~~~g~~~~~lGh--~~p~i~~Ai~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~------~~~~v~f--~~S 121 (457)
T PRK05639 52 GNVFIDFLAGAAAASTGY--SHPKLVKAVQEQVALIQHSMIGYTHSERAIRVAEKLAEISPI------ENPKVLF--GLS 121 (457)
T ss_pred CCEEEECCcCHHhhccCC--CCHHHHHHHHHHHHhccccccCccCCHHHHHHHHHHHhhCCC------CcCEEEE--eCc
Confidence 457899988753222233 36778888888775421 11232323333455555554211 1257888 999
Q ss_pred chhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHH-HhhCC--------C-----CeEEeeeecCCC--CC----CChh--
Q 012238 160 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI-FNDAR--------V-----PWSEYRYYDPKT--VG----LDFE-- 217 (467)
Q Consensus 160 gt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~-~~~~G--------~-----~~~~v~~~~~~~--~~----~d~~-- 217 (467)
|++|.+.+.++........+|+....+|.+.... +...| . .++.+|..+... +. .|.+
T Consensus 122 GsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 201 (457)
T PRK05639 122 GSDAVDMAIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDEL 201 (457)
T ss_pred hHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCccccccccccccCCHHHH
Confidence 9999999866654444446888888888764432 22111 1 123333311100 00 1222
Q ss_pred ------hHHHHHHc---CCCCcEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHH
Q 012238 218 ------GMIADIKA---APGGSFILLHGCAHNPTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVR 287 (467)
Q Consensus 218 ------~l~~~l~~---~~~~~~~i~i~~p~NPTG~-~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~ 287 (467)
.+++.+.. .+.+...+++-..+-..|. ..+.+-+++|.++|++||+++|+||+..+|.-.+ ..+..
T Consensus 202 ~~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG---~~~a~- 277 (457)
T PRK05639 202 INRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTGIGRTG---KWFAS- 277 (457)
T ss_pred HHHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCcCc---hHHHH-
Confidence 34443321 1345666666666655676 4568889999999999999999999988764221 11122
Q ss_pred HHHhcCCeEEEEecCccCcccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCCh
Q 012238 288 LFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNP 367 (467)
Q Consensus 288 ~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~ 367 (467)
....-.+++++ |+|.++ .|+.+|+++ ..+++.+. ...... .+.+.+.++..++.+.|+-
T Consensus 278 ~~~gv~PDiv~---~gK~l~-gG~pi~av~---~~~~i~~~------------~~~~~~-~T~~g~p~~~aaa~a~l~~- 336 (457)
T PRK05639 278 EWFEVKPDLII---FGKGVA-SGMGLSGVI---GRKELMDL------------TSGSAL-LTPAANPVISAAAEATLEI- 336 (457)
T ss_pred HhcCCCCCEEE---echhhc-CCCcceeEE---ehHHHHhh------------cCCCcc-cCCCcCHHHHHHHHHHHHH-
Confidence 11122334444 799998 688888885 66665543 211111 1223444444454444431
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhc----cCCCCCcccccCCcceEE--ecC-C---C----HHHHHHHHHccc
Q 012238 368 ALFDEWKAEMEMMAGRIKNVRQKLFDSLSAK----DKSGKDWSFILRQIGMFS--FTG-L---N----KAQSDNMTNKWH 433 (467)
Q Consensus 368 ~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~----~g~~~~~~~~~~~~g~f~--~~~-l---~----~~~~~~ll~~~g 433 (467)
+.+ +...++.+++-++|.+.|+ + .++ ...+...|.++- +.. . + ..+.+.+++ +|
T Consensus 337 -l~~------~~l~~~~~~~g~~l~~~L~-~l~~~~~~---~~~VrG~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~-~G 404 (457)
T PRK05639 337 -IEE------ENLLKNALKVGEFIKKRLL-EMKESFEV---IGDVRGKGLMIGVEIVKENGKPDPELTGKICWRAFE-LG 404 (457)
T ss_pred -HHH------ccHHHHHHHHHHHHHHHHH-HHHHhCCC---EEeeccceeEEEEEEecCCCCCCHHHHHHHHHHHHh-CC
Confidence 100 1222333334444444444 3 222 112233333321 111 0 1 123445555 69
Q ss_pred EEEeCCC------eEEec-cCChhhHHHHHHHHHHHHHhc
Q 012238 434 VYMTKDG------RISLA-GLSLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 434 I~v~~gg------Ris~~-~~~~~~i~~~~~~l~~~l~~~ 466 (467)
+++.+.| ||... .++++++++++++|.++++.+
T Consensus 405 v~~~~~g~~~~~lr~~Ppl~it~~~id~~~~~l~~~l~~~ 444 (457)
T PRK05639 405 LILPSYGMFGNVIRITPPLVITKEIAEKGLEIMERAIKDA 444 (457)
T ss_pred eEEeecCCCCCEEEEeCCCccCHHHHHHHHHHHHHHHHHH
Confidence 9997743 55533 248899999999999998653
No 310
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.46 E-value=2.5e-11 Score=114.46 Aligned_cols=166 Identities=19% Similarity=0.124 Sum_probs=128.9
Q ss_pred CcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcch----HHHHhhCCCC
Q 012238 125 IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNH----KNIFNDARVP 200 (467)
Q Consensus 125 ~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~----~~~~~~~G~~ 200 (467)
.+-...|.+.+|.+-.+ +..+.+.+|+.|+..+ ++....+||.|+..+--|.+. ...++.+|++
T Consensus 61 NPT~~vlE~RiAaLEGG----------~aa~a~aSG~AA~~~a--i~~la~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~ 128 (426)
T COG2873 61 NPTTDVLEERIAALEGG----------VAALAVASGQAAITYA--ILNLAGAGDNIVSSSKLYGGTYNLFSHTLKRLGIE 128 (426)
T ss_pred CchHHHHHHHHHHhhcc----------hhhhhhccchHHHHHH--HHHhccCCCeeEeeccccCchHHHHHHHHHhcCcE
Confidence 44577899999999433 3333369999999998 777888999999998777654 4456789999
Q ss_pred eEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCC
Q 012238 201 WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLD 280 (467)
Q Consensus 201 ~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~ 280 (467)
+..++- .|++.++++++ ++++++++-+-.||.+.+.+.+ +|+++|+++|+++|+|..+..-.
T Consensus 129 v~fvd~-------~d~~~~~~aI~---~nTkavf~EtigNP~~~v~Die---~ia~iAh~~gvpliVDNT~atpy----- 190 (426)
T COG2873 129 VRFVDP-------DDPENFEAAID---ENTKAVFAETIGNPGLDVLDIE---AIAEIAHRHGVPLIVDNTFATPY----- 190 (426)
T ss_pred EEEeCC-------CCHHHHHHHhC---cccceEEEEeccCCCccccCHH---HHHHHHHHcCCcEEEecCCCcce-----
Confidence 998864 47899999998 7999999999999999988765 78888999999999999955321
Q ss_pred CChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecCCHHHH
Q 012238 281 NDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLA 326 (467)
Q Consensus 281 ~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~ 326 (467)
-++++ +. .-.|++.|.||.+|-.|--+|.+++-++.-++.
T Consensus 191 ----l~rP~-~h-GADIVvHS~TK~igGhGt~iGG~iVD~G~FDw~ 230 (426)
T COG2873 191 ----LCRPI-EH-GADIVVHSATKYIGGHGTAIGGVIVDGGKFDWT 230 (426)
T ss_pred ----ecchh-hc-CCCEEEEeecccccCCccccceEEEeCCccccc
Confidence 11111 22 245889999999999999999998655554433
No 311
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.45 E-value=5.7e-11 Score=129.25 Aligned_cols=298 Identities=10% Similarity=0.009 Sum_probs=178.3
Q ss_pred hHHHHHHHHHHHhCCCCcccccCceeeeecCCch----hHHHHHHHHHHHhCC-CC----EEEEcCCCCcchHHHHhhCC
Q 012238 128 LAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT----GSLRLAAALIERYFP-GA----KVLISSPTWGNHKNIFNDAR 198 (467)
Q Consensus 128 ~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt----~al~l~~~~l~~~~~-gd----~Vlv~~P~y~~~~~~~~~~G 198 (467)
+.++|+.++++++. ++|.+ +.+++ .++.++ +.....+ || .|+++...+......+...|
T Consensus 570 ~~~~r~~la~i~g~--------~~v~f--~pnaga~ge~a~~~v--i~~~~~~~Gd~~r~~vli~~~aH~sn~a~a~~~G 637 (993)
T PLN02414 570 FEDLGDLLCEITGF--------DSFSL--QPNAGAAGEYAGLMV--IRAYHLSRGDHHRNVCIIPVSAHGTNPASAAMCG 637 (993)
T ss_pred HHHHHHHHHHHhCC--------CeEEE--cCCCcHHHHHHHHHH--HHHHHhccCCCCCCEEEeCCCcCccCHHHHHHCC
Confidence 45677777777532 57888 77777 677776 3333444 88 89999999888888888899
Q ss_pred CCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCC
Q 012238 199 VPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGS 278 (467)
Q Consensus 199 ~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~ 278 (467)
++++.++++ .++.+|+++|++.+++..+++++|++++|+|-+|...+ +++|+++|+++|.++++|.+.. .....
T Consensus 638 ~~vv~v~~d--~~G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~~---I~eI~~iah~~Galv~vDgAq~-~a~~~ 711 (993)
T PLN02414 638 MKIVVVGTD--AKGNINIEELRKAAEAHKDNLAALMVTYPSTHGVYEEG---IDEICDIIHDNGGQVYMDGANM-NAQVG 711 (993)
T ss_pred CEEEEeccC--CCCCcCHHHHHHHHhccCCCeEEEEEECCCccccccch---HHHHHHHHHHcCCEEEEEecCH-HhccC
Confidence 999999983 45689999999999854457889999999999998655 5577888999999999999942 22111
Q ss_pred CCCChhHHHHHHhcCCeEEEEecCccCcccC----CCccceEEEecCCHHHHhh-hhhhhHHHHHHHHHhhccC--ccCC
Q 012238 279 LDNDASSVRLFATRGMELLVAQSYSKNLGLY----AERIGAMNVVCSSSDLAAR-CCEVAVIQVKSQLKRLARP--MYSN 351 (467)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~----G~RiG~~~~v~~~~~~~~~-~~~~~~~~~~~~l~~~~~~--~~~~ 351 (467)
+ .+. ....-.++.+|..|.|+.| |-.+|.+. ..+.+... -.++ .+.-.....+.... ....
T Consensus 712 l-~~p-------~~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~---~~~~L~p~lPg~~-v~~~~~~~~r~~~s~iGt~~ 779 (993)
T PLN02414 712 L-TSP-------GFIGADVCHLNLHKTFCIPHGGGGPGMGPIG---VKKHLAPFLPSHP-VVPTGGIPRPEKTQPLGTIS 779 (993)
T ss_pred c-CCc-------cccCCCEEEecCCccCCcCcccCCCCeeeEE---EchhhcccCCCCc-cccCCCcccccCCCCcCCcc
Confidence 0 000 1113457788899966522 33468874 44444433 0000 00000000000000 0111
Q ss_pred CchHHHH----HHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceE---E--ecC---
Q 012238 352 PPVHGAR----IVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMF---S--FTG--- 419 (467)
Q Consensus 352 ~~~~~~~----~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~~~g~f---~--~~~--- 419 (467)
...+++. ++...+.. .-.+.+++..++...+.+++.+.|.+..+ ..+..+.+.+| + +..
T Consensus 780 ~a~~g~al~l~~A~~yi~~-----lG~~Gl~~~a~~a~~nAnYl~~rL~~~~~----~~~~~~~~~~~hEfv~~~~~l~~ 850 (993)
T PLN02414 780 AAPWGSALILPISYTYIAM-----MGSEGLTDASKIAILNANYMAKRLEGHYP----VLFRGKNGTCAHEFIIDLRPFKN 850 (993)
T ss_pred chhhhhHHHHHHHHHHHHH-----HCHhHHHHHHHHHHHHHHHHHHHHHhhCC----ccccCCCCCeeeeEEEecccccc
Confidence 1122111 11111111 01244667777788888899998872222 23333333211 1 111
Q ss_pred ---CC-HHHHHHHHHcccEEEe----CC--C-eEEeccC-ChhhHHHHHHHHHHHHHh
Q 012238 420 ---LN-KAQSDNMTNKWHVYMT----KD--G-RISLAGL-SLAKCEYLADAIIDSYHN 465 (467)
Q Consensus 420 ---l~-~~~~~~ll~~~gI~v~----~g--g-Ris~~~~-~~~~i~~~~~~l~~~l~~ 465 (467)
.+ .+..++|+ ++||... |. . ||+.+.. +++++++++++++.+..+
T Consensus 851 ~~g~~~~di~krL~-d~Gihapt~~~pv~~~lmiepTE~~skeelDrf~~al~~i~~e 907 (993)
T PLN02414 851 TAGIEPEDVAKRLM-DYGFHAPTMSWPVPGTLMIEPTESESKAELDRFCDALISIREE 907 (993)
T ss_pred ccCCCHHHHHHHHH-HcCcEEeeeccccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHH
Confidence 23 34466666 6788642 22 2 8886643 779999999999887665
No 312
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.45 E-value=3.9e-10 Score=115.29 Aligned_cols=338 Identities=12% Similarity=0.042 Sum_probs=181.4
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCC-cCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCc
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENK-EYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 160 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~-~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~gg 160 (467)
+.+.||+. |.....-|. -.|.|.+++.+.++..... .+.+.....+|-+.++++.... .+.+.+ +++|
T Consensus 71 G~~ylD~~-g~~~~~lGh--~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~lae~L~~~~p~~------~~~v~f--~~sG 139 (459)
T PRK06082 71 GKKYMDFH-GNNVHQLGY--GHPHVIEKVKEQMAKLPFSPRRFTNETAIECAEKLTEIAGGE------LNRVLF--APGG 139 (459)
T ss_pred CCEEEEcc-cHhhcccCC--CCHHHHHHHHHHHHhCCCccCccCCHHHHHHHHHHHHhCCCC------CCEEEE--CCCc
Confidence 45789987 432111232 3677888888877542111 1112333444555555553111 257888 9999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCCcchHH-HHhhCCC------------CeEEeeeecCCC--CC-C------Chhh
Q 012238 161 TGSLRLAAALIERYFPGAKVLISSPTWGNHKN-IFNDARV------------PWSEYRYYDPKT--VG-L------DFEG 218 (467)
Q Consensus 161 t~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~-~~~~~G~------------~~~~v~~~~~~~--~~-~------d~~~ 218 (467)
++|.+.+..+........+|+...-+|..... .+...|. .+..+|...... +. . +++.
T Consensus 140 seAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (459)
T PRK06082 140 TSAIGMALKLARHITGNFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADY 219 (459)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHHH
Confidence 99999986654444444789988888866532 2222221 112222100000 00 0 1245
Q ss_pred HHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEE
Q 012238 219 MIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV 298 (467)
Q Consensus 219 l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~ 298 (467)
+++.+++. ....++++-..++-.+..++.+-+++|.++|++||+++|.||+..+|.-.+ ..+.... ..-.+++++
T Consensus 220 l~~~i~~~-~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG---~~fa~e~-~gv~PDiv~ 294 (459)
T PRK06082 220 LEYVIEKE-GGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTG---EWFTHQA-YGIEPDILC 294 (459)
T ss_pred HHHHHhcC-CCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccc---hhhHhHh-hCCCCCEEE
Confidence 67777542 345566665555554557788899999999999999999999988764221 1122211 122334443
Q ss_pred EecCccCcccCC-CccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHH
Q 012238 299 AQSYSKNLGLYA-ERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEM 377 (467)
Q Consensus 299 ~~S~SK~~~~~G-~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l 377 (467)
++|.++ .| +.+|.++ ..+++... ........+.+.+.++..++.+.|+- + ++
T Consensus 295 ---~gKgl~-gG~~P~~av~---~~~~i~~~------------~~~~~~~~T~~gnpl~~aaa~a~L~~--l----~~-- 347 (459)
T PRK06082 295 ---IGKGLG-GGLVPIAAMI---TKDKYNTA------------AQISLGHYTHEKSPLGCAAALATIEV--I----EQ-- 347 (459)
T ss_pred ---eccccc-CCCCcceEEE---EcHHHHhh------------ccCCCCCCCCCcCHHHHHHHHHHHHH--H----Hh--
Confidence 799998 67 4888885 55554432 21111112334455555555544431 1 11
Q ss_pred HHHHHHHHHHHHHHHHHhhh---ccCCCCCcccccCCcceEEe-c--CC-----C----HHHHHHHHHcccEEEeCC-C-
Q 012238 378 EMMAGRIKNVRQKLFDSLSA---KDKSGKDWSFILRQIGMFSF-T--GL-----N----KAQSDNMTNKWHVYMTKD-G- 440 (467)
Q Consensus 378 ~~~~~~~~~~r~~l~~~l~~---~~g~~~~~~~~~~~~g~f~~-~--~l-----~----~~~~~~ll~~~gI~v~~g-g- 440 (467)
+...++.+++-++|.+.|++ +.+. +..+...|.++.+ + +. + ..+...+++ +||++.+. +
T Consensus 348 ~~l~~~~~~~g~~l~~~L~~l~~~~~~---i~~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~-~Gvl~~~~~~~ 423 (459)
T PRK06082 348 EGLLEKVKADSQFMRERLLEMKAKYPL---IGDVRGIGLLWGVELVTDRHTKERAYDEAEAVLYRCLN-NGLSFKVSQGN 423 (459)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHhhCCC---eeeeeeccceeEEEEccCccccCccHHHHHHHHHHHHh-CCCEEEecCCC
Confidence 12334444444445554440 2332 1122334433311 1 11 1 122445554 69998875 3
Q ss_pred --eEEec-cCChhhHHHHHHHHHHHHHhc
Q 012238 441 --RISLA-GLSLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 441 --Ris~~-~~~~~~i~~~~~~l~~~l~~~ 466 (467)
||+.. .+++++++++++++.+++.++
T Consensus 424 ~i~~~Ppl~it~~eid~~~~~l~~~l~~~ 452 (459)
T PRK06082 424 VIQLSPPLIITREELTQALAILEEAIAKI 452 (459)
T ss_pred EEEEeCCCccCHHHHHHHHHHHHHHHHHH
Confidence 66533 348899999999999998653
No 313
>PRK06062 hypothetical protein; Provisional
Probab=99.45 E-value=1.7e-10 Score=117.84 Aligned_cols=339 Identities=11% Similarity=0.020 Sum_probs=181.7
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCC--CcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCC
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGEN--KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 159 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~--~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g 159 (467)
+.+.||+..|.--..-|. -.|.|.+++.+.++.... ..| ......+|-+.+++.... .-+++.+ +++
T Consensus 52 G~~ylD~~~g~~~~~lGh--~~p~v~~Ai~~q~~~~~~~~~~~-~~~~~~~lae~L~~~~p~------~~~~v~f--~~S 120 (451)
T PRK06062 52 GRRYLDFSSQLVNTNIGH--QHPKVVAAIQEQAARLCTVAPAH-ANDARSEAARLIAERAPG------DLSKVFF--TNG 120 (451)
T ss_pred CCEEEEcccCHHhhcCCC--CCHHHHHHHHHHHHhcCCcCCcc-CCHHHHHHHHHHHHhCCC------CCCEEEE--cCC
Confidence 458899988753112232 357788888887754221 112 222233444444443211 1258888 999
Q ss_pred chhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHH-hhCCC-----------CeEEeeeecCCC--CC--CC-------h
Q 012238 160 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF-NDARV-----------PWSEYRYYDPKT--VG--LD-------F 216 (467)
Q Consensus 160 gt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~-~~~G~-----------~~~~v~~~~~~~--~~--~d-------~ 216 (467)
|++|.+.+.++........+|+...-+|.+..... ...|. .+..++...... +. -| +
T Consensus 121 GsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 200 (451)
T PRK06062 121 GADANEHAVRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEECERAL 200 (451)
T ss_pred hHHHHHHHHHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCccccccCCCChHHHHHHHH
Confidence 99999998665444433468888888887654322 22111 112221100000 10 12 5
Q ss_pred hhHHHHHHcC-CCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCC
Q 012238 217 EGMIADIKAA-PGGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGM 294 (467)
Q Consensus 217 ~~l~~~l~~~-~~~~~~i~i~~p~NPTG~~-~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~ 294 (467)
+.+++.++.. +.+...+++-.-+.-.|.+ ++.+-+++|.++|++||+++|+||+..+|.-.+ ..+.. ....-.+
T Consensus 201 ~~le~~l~~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG---~~~a~-~~~gv~P 276 (451)
T PRK06062 201 AHLERVIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRTG---KWFAI-EHFGVVP 276 (451)
T ss_pred HHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCcCc---HHHHH-HhcCCCC
Confidence 6777777543 2344555655555445665 477889999999999999999999988764211 11112 1112223
Q ss_pred eEEEEecCccCcccCCC-ccceEEEecCCHHHHhhhhhhhHHHHHHHHHhh--ccCccCCCchHHHHHHHHHhCChhhHH
Q 012238 295 ELLVAQSYSKNLGLYAE-RIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRL--ARPMYSNPPVHGARIVANVVGNPALFD 371 (467)
Q Consensus 295 ~~i~~~S~SK~~~~~G~-RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~L~~~~~~~ 371 (467)
+++ .|+|.++ .|. .+|.++ ..+++.+. +... ....+.+.++++..++.+.|+- +.+
T Consensus 277 Di~---t~gK~lg-gG~~Pigav~---~~~~i~~~------------~~~~~~~~~~T~~gnpl~~Aaa~a~L~~--l~~ 335 (451)
T PRK06062 277 DLI---TFAKGVN-SGYVPLGGVA---ISEAIAAT------------FADRPYPGGLTYSGHPLACAAAVATINA--MEE 335 (451)
T ss_pred Cee---eechhhh-cCCcCcEEEE---EcHHHHHH------------hccCCCCCCCCCCCCHHHHHHHHHHHHH--HHh
Confidence 433 5799998 674 788885 66677766 3211 1222233445555555555431 100
Q ss_pred HHHHHHHHHHHHHHHHH-HHHHHHhhh---ccCCCCCcccccCCcceEE-ec-CC----------------CHHHHHHHH
Q 012238 372 EWKAEMEMMAGRIKNVR-QKLFDSLSA---KDKSGKDWSFILRQIGMFS-FT-GL----------------NKAQSDNMT 429 (467)
Q Consensus 372 ~~~~~l~~~~~~~~~~r-~~l~~~l~~---~~g~~~~~~~~~~~~g~f~-~~-~l----------------~~~~~~~ll 429 (467)
+...++.++.- +++.+.|++ +.+. ...+...|-++- .+ .- ...+...++
T Consensus 336 ------~~l~~~~~~~G~~~l~~~L~~l~~~~~~---v~~vrG~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 406 (451)
T PRK06062 336 ------EGIVENAARIGAEVLGPGLRELAERHPS---VGEVRGLGVFWALELVADRETREPLAPYGASSAAMAAVKAACK 406 (451)
T ss_pred ------cCHHHHHHHHHHHHHHHHHHHHHhcCCc---EEeEeccccEEEEEEcccccccCCCcccchhhHHHHHHHHHHH
Confidence 01223333332 234444430 2221 111223333221 11 10 012344555
Q ss_pred HcccEEEeCCC---eEEec-cCChhhHHHHHHHHHHHHHhc
Q 012238 430 NKWHVYMTKDG---RISLA-GLSLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 430 ~~~gI~v~~gg---Ris~~-~~~~~~i~~~~~~l~~~l~~~ 466 (467)
++||++.+.+ ||+.. .+++++++++++++.++++.+
T Consensus 407 -~~Gvl~~~~~~~lrl~ppl~~t~~eid~~~~~l~~~l~~~ 446 (451)
T PRK06062 407 -ERGLLPFVNGNRIHVVPPCTVTEDEVREGLAILDAALAVA 446 (451)
T ss_pred -HCCcEEeecCCEEEEECCccCCHHHHHHHHHHHHHHHHHh
Confidence 4699987654 66653 248899999999999998765
No 314
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.45 E-value=2.3e-10 Score=116.15 Aligned_cols=340 Identities=9% Similarity=0.009 Sum_probs=183.8
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCC--CCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCC
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE--NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 159 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~--~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g 159 (467)
+.+.|||..|..-..-| .-+|.+.+++.+.++... ...+.......++-+.+++..... -+++.+ +++
T Consensus 44 G~~ylD~~~g~~~~~lG--h~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~------~~~v~f--~~s 113 (427)
T TIGR00508 44 GRRLIDGMSSWWAAIHG--YNHPRLNAAAQKQIDKMSHVMFGGFTHKPAIELCQKLVKMTPNA------LDCVFL--ADS 113 (427)
T ss_pred CCEEEEccchHHHhcCC--CCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHhhCCCC------CCEEEE--eCC
Confidence 45799998775211113 236778888888775421 111112223344445555542111 258888 999
Q ss_pred chhHHHHHHHHHHHhC-----CC-CEEEEcCCCCcchHHHHh-hCCCC-------------eEEeeeecCCCCC-----C
Q 012238 160 GTGSLRLAAALIERYF-----PG-AKVLISSPTWGNHKNIFN-DARVP-------------WSEYRYYDPKTVG-----L 214 (467)
Q Consensus 160 gt~al~l~~~~l~~~~-----~g-d~Vlv~~P~y~~~~~~~~-~~G~~-------------~~~v~~~~~~~~~-----~ 214 (467)
|++|.+.+..+..... +| .+|+...-+|......+- ..|-. +..++.. ...+. .
T Consensus 114 GseA~e~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~ 192 (427)
T TIGR00508 114 GSVAVEVALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPAP-QNRFDEEWNEE 192 (427)
T ss_pred cHHHHHHHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCCC-CccccchhHHH
Confidence 9999998855543331 23 579999988876533222 11211 1111110 00111 1
Q ss_pred ChhhHHHHHHcCCCCcEEEEeCCC-CCCCCC-CCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhc
Q 012238 215 DFEGMIADIKAAPGGSFILLHGCA-HNPTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR 292 (467)
Q Consensus 215 d~~~l~~~l~~~~~~~~~i~i~~p-~NPTG~-~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~ 292 (467)
|++.+++.+.....+..+|++... ++-.|. .++.+.+++|.++|++||+++|+||++.++...+ ..+.. .....
T Consensus 193 ~~~~l~~~l~~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G---~~~~~-~~~~v 268 (427)
T TIGR00508 193 AITPLAKLMELHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRTG---KLFAC-EHAGV 268 (427)
T ss_pred HHHHHHHHHHhcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCC---ccchh-hhcCC
Confidence 466777777654344455554442 555555 4478999999999999999999999987764321 11111 11122
Q ss_pred CCeEEEEecCccCcccCCC-ccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhc-----cCccCCCchHHHHHHHHHhCC
Q 012238 293 GMELLVAQSYSKNLGLYAE-RIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLA-----RPMYSNPPVHGARIVANVVGN 366 (467)
Q Consensus 293 ~~~~i~~~S~SK~~~~~G~-RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~~~~~~~~~~~~~L~~ 366 (467)
.+++++ ++|.++ .|+ -++.+ +..+++.+. +.... ...+...+.++..++.+.|+.
T Consensus 269 ~pDi~~---~gK~l~-gG~~p~~a~---~~~~~~~~~------------~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~ 329 (427)
T TIGR00508 269 VPDILC---VGKALT-GGYMTLSAT---VTTDKVAQT------------ISSGEAGCFMHGPTFMGNPLACAVAEASLAI 329 (427)
T ss_pred CCCEEE---echhhh-cCcccceEE---EEcHHHHHH------------HhcCCCCccccCCCCCcCHHHHHHHHHHHHH
Confidence 234343 799996 674 45655 367777665 43210 111112344555555544431
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceE-EecC--CC-HHHHHHHHHcccEEEeCCC--
Q 012238 367 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMF-SFTG--LN-KAQSDNMTNKWHVYMTKDG-- 440 (467)
Q Consensus 367 ~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~~~g~f-~~~~--l~-~~~~~~ll~~~gI~v~~gg-- 440 (467)
+ ++ +...++.+++-++|.+.|+ +++....+......|.++ +.+. .. ..+..++++ +||++.+.|
T Consensus 330 --l----~~--~~~~~~~~~~~~~l~~~L~-~l~~~~~i~~vrg~G~~~~i~~~~~~~~~~~~~~l~~-~Gv~~~~~~~~ 399 (427)
T TIGR00508 330 --L----LE--GEWQKQVSAIENQLKRELS-PLRKNPVVKDVRVLGAIGVVEMYKPVNVEELQKKFVE-QGVWIRPFGKL 399 (427)
T ss_pred --H----Hh--CCHHHHHHHHHHHHHHHHH-HhhcCCCEEeEeccccEEEEEECCccCHHHHHHHHHH-CCeEEEecCCE
Confidence 1 11 1234556666666777776 553100011111223322 1111 12 234555555 599998776
Q ss_pred -eEEec-cCChhhHHHHHHHHHHHHHh
Q 012238 441 -RISLA-GLSLAKCEYLADAIIDSYHN 465 (467)
Q Consensus 441 -Ris~~-~~~~~~i~~~~~~l~~~l~~ 465 (467)
|++.. ..++++++++++++.+++.+
T Consensus 400 l~~~ppl~~t~~~id~~~~~l~~~l~~ 426 (427)
T TIGR00508 400 IYVMPPYIITTEQLQKLTAALIEALHE 426 (427)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHHhc
Confidence 66654 23889999999999999864
No 315
>PRK07482 hypothetical protein; Provisional
Probab=99.44 E-value=3.6e-10 Score=115.77 Aligned_cols=342 Identities=13% Similarity=0.043 Sum_probs=183.8
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCC-CCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCc
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 160 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~-~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~gg 160 (467)
+.+.||+..|..-..-|. -.|.|.+++.+.++... ...+ . ....+.+..+|+.|...... .-+++.+ +++|
T Consensus 49 G~~ylD~~sg~~~~~lGh--~~p~v~~Av~~q~~~~~~~~~~-~-~~~~~~~~~lAe~L~~~~p~--~~~~v~f--~~sG 120 (461)
T PRK07482 49 GRRYIDAFAGLYCVNVGY--GRTEVAEAIAEQAKELAYYHTY-V-GHGTEASITLSKRIIDRAPA--GMSKVYY--GLSG 120 (461)
T ss_pred CCEEEEcccchhhhcCCC--CCHHHHHHHHHHHHhcCccccc-c-ccCCHHHHHHHHHHHHhCCC--CcCEEEE--eCch
Confidence 458899988865222233 36788888888876531 1111 0 01123334444444332110 1357888 9999
Q ss_pred hhHHHHHHHHHHHh----C-C-CCEEEEcCCCCcchHHHHhh-CC------------CCeEEeeeecCCCC---C-----
Q 012238 161 TGSLRLAAALIERY----F-P-GAKVLISSPTWGNHKNIFND-AR------------VPWSEYRYYDPKTV---G----- 213 (467)
Q Consensus 161 t~al~l~~~~l~~~----~-~-gd~Vlv~~P~y~~~~~~~~~-~G------------~~~~~v~~~~~~~~---~----- 213 (467)
++|++.+.++.... . + ..+|+....+|.+....... .| -.+..++....... +
T Consensus 121 SEAve~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 200 (461)
T PRK07482 121 SDANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEEQ 200 (461)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCccccccccCCCHHH
Confidence 99999986654332 1 2 25788888888765322111 11 01122221100000 0
Q ss_pred ---CChhhHHHHHHc-CCCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHH
Q 012238 214 ---LDFEGMIADIKA-APGGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRL 288 (467)
Q Consensus 214 ---~d~~~l~~~l~~-~~~~~~~i~i~~p~NPTG~~-~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~ 288 (467)
.+++.+++.+.. .++....+++-..+.-.|.. ++.+-+++|.++|++||+++|.||+..+|.-.+ ..+...
T Consensus 201 ~~~~~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG---~~~a~~- 276 (461)
T PRK07482 201 FSAYCADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRLG---SMFGSD- 276 (461)
T ss_pred HHHHHHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCc---chhhHH-
Confidence 135677777753 23455666666556556776 567889999999999999999999988884221 122221
Q ss_pred HHhcCCeEEEEecCccCcccCCC-ccceEEEecCCHHHHhhhhhhhHHHHHHHHHh-------hccCccCCCchHHHHHH
Q 012238 289 FATRGMELLVAQSYSKNLGLYAE-RIGAMNVVCSSSDLAARCCEVAVIQVKSQLKR-------LARPMYSNPPVHGARIV 360 (467)
Q Consensus 289 ~~~~~~~~i~~~S~SK~~~~~G~-RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~~~ 360 (467)
...-.+++++ ++|.++ .|. .+|.++ ..+++.+. +.. .....+.+.+.++..++
T Consensus 277 ~~gv~PDiv~---~gKgl~-gG~~Pi~av~---~~~~i~~~------------~~~~~~~~~~~~h~~T~~gnpl~~Aaa 337 (461)
T PRK07482 277 HYGIEPDLIT---VAKGLT-SAYAPLSGSI---VGEKVWDV------------LEQGSDEHGAIGHGWTYSGHPICAAAA 337 (461)
T ss_pred hcCCCCCEEE---Eccccc-cCccccceee---ecHHHHHH------------HhcccccCCccccCCCCCcCHHHHHHH
Confidence 1222345454 489987 674 788874 66666665 321 01112334555666666
Q ss_pred HHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhh---ccCCCCCcccccCCcceE-Eec-C-C------C------H
Q 012238 361 ANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSA---KDKSGKDWSFILRQIGMF-SFT-G-L------N------K 422 (467)
Q Consensus 361 ~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~---~~g~~~~~~~~~~~~g~f-~~~-~-l------~------~ 422 (467)
.+.|+- +.+ +...++.++.-+++.+.|++ +.+. ...+...|.++ +.+ . - + .
T Consensus 338 ~a~L~~--~~~------~~l~~~~~~~g~~l~~~L~~l~~~~~~---v~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~ 406 (461)
T PRK07482 338 LANLDI--LER------ENLVGNAAEVGAYFRARLRAAFGDHPL---VGEVRGVGMLAAVEFVADRDDRTPFDPALKIGP 406 (461)
T ss_pred HHHHHH--HHh------CCHHHHHHHHHHHHHHHHHHHHhcCCC---EEEEeeceeEEEEEeccCCCcCCCCChhhHHHH
Confidence 555431 110 12233334444444444440 3332 11223333333 111 1 0 1 1
Q ss_pred HHHHHHHHcccEEEeCC--C---eEEec-cCChhhHHHHHHHHHHHHHhc
Q 012238 423 AQSDNMTNKWHVYMTKD--G---RISLA-GLSLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 423 ~~~~~ll~~~gI~v~~g--g---Ris~~-~~~~~~i~~~~~~l~~~l~~~ 466 (467)
.+...+++ +||++.+. | |+... .++++++++++++|.++++++
T Consensus 407 ~i~~~~~~-~Gvl~~~~~~~~~i~~~Ppl~it~~ei~~~~~~l~~~l~~~ 455 (461)
T PRK07482 407 QVSAAALE-RGVIARAMPHGDILGFAPPLVLTRAEADEIVAIAKDAVDEV 455 (461)
T ss_pred HHHHHHHH-CCcEEecCCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 23445554 69998643 4 66532 348899999999999998753
No 316
>PRK05965 hypothetical protein; Provisional
Probab=99.44 E-value=3.9e-10 Score=115.39 Aligned_cols=344 Identities=11% Similarity=0.055 Sum_probs=185.1
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCC-C---cCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeec
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGEN-K---EYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQG 157 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~-~---~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t 157 (467)
+.+.||+..|..-..-|. -.|.|.+++.+.++.... . .| +.....+|-+.+++..-. .-+++++ +
T Consensus 45 G~~ylD~~~g~~~~~lGh--~~p~i~~Ai~~q~~~~~~~~~~~~~-~~~~~~~lae~L~~~~p~------~~~~v~f--~ 113 (459)
T PRK05965 45 GHQLLDAFAGLWCVNVGY--GQESIVEAAAEQMRELPYATGYFHF-GSEPAIRLAAKLAERAPG------SLNHVYF--T 113 (459)
T ss_pred CCEEEECcccHHhccCCC--CCHHHHHHHHHHHHhcCCccccccc-CCHHHHHHHHHHHhhCCC------CcCEEEE--e
Confidence 458899987754222232 367888888887754210 1 11 122222344444443211 1357888 9
Q ss_pred CCchhHHHHHHHHHHHhC-----C-CCEEEEcCCCCcchHHHH-hhC---------CC---CeEEeeeecC--CCCCCC-
Q 012238 158 LSGTGSLRLAAALIERYF-----P-GAKVLISSPTWGNHKNIF-NDA---------RV---PWSEYRYYDP--KTVGLD- 215 (467)
Q Consensus 158 ~ggt~al~l~~~~l~~~~-----~-gd~Vlv~~P~y~~~~~~~-~~~---------G~---~~~~v~~~~~--~~~~~d- 215 (467)
++|++|.+.+.++..... + ..+|+....+|.+..... ... |. .+..++.... ..+..|
T Consensus 114 ~sGSEAve~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (459)
T PRK05965 114 LGGSDAVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDP 193 (459)
T ss_pred CChhHHHHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCcccccccCCCh
Confidence 999999999866644431 2 257999999987654211 111 10 1122222100 001123
Q ss_pred -------hhhHHHHHHcCC-CCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHH
Q 012238 216 -------FEGMIADIKAAP-GGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSV 286 (467)
Q Consensus 216 -------~~~l~~~l~~~~-~~~~~i~i~~p~NPTG~~-~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~ 286 (467)
++.+++.+.... +....+++...+...|.. ++.+-+++|.++|++||+++|.||+..+|.-.+ ..+..
T Consensus 194 ~~~~~~~~~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG---~~~a~ 270 (459)
T PRK05965 194 QAIIAASVAALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTG---PLFAC 270 (459)
T ss_pred HHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccCc---hhhhH
Confidence 256777776432 445566666566666764 577889999999999999999999988884221 12222
Q ss_pred HHHHhcCCeEEEEecCccCcccCC-CccceEEEecCCHHHHhhhhhhhHHHHHHHHH---hhccCccCCCchHHHHHHHH
Q 012238 287 RLFATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARCCEVAVIQVKSQLK---RLARPMYSNPPVHGARIVAN 362 (467)
Q Consensus 287 ~~~~~~~~~~i~~~S~SK~~~~~G-~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~~~~~ 362 (467)
....-.+++++ ++|.++ .| +.+|.++ ..+++.+. +..... ......+.+.++++..++.+
T Consensus 271 -~~~gv~PDiv~---~gKgl~-gG~~Pi~av~---~~~~i~~~--------~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a 334 (459)
T PRK05965 271 -EAEGVVPDLMT---VAKGLT-SGYVPMGAVL---MSDHVYQG--------IADGAGAAAPVGHGYTYSAHPVSAAVGLE 334 (459)
T ss_pred -hhcCCCCCeEE---echhhc-cCCcceeEEE---EcHHHHHH--------HhccccccccccccCCCCCCHHHHHHHHH
Confidence 11122345443 479998 78 4899985 67777765 211000 01111233445555555555
Q ss_pred HhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC-CCCCcccccCCcceEEe-c--CC------C------HHHHH
Q 012238 363 VVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK-SGKDWSFILRQIGMFSF-T--GL------N------KAQSD 426 (467)
Q Consensus 363 ~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g-~~~~~~~~~~~~g~f~~-~--~l------~------~~~~~ 426 (467)
.|+- + ++ +...++.++.-++|.+.|+ ++. .|. +..+...|.++.+ + +- + ..+..
T Consensus 335 ~L~~--l----~~--~~l~~~~~~~g~~l~~~l~-~l~~~~~-v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~ 404 (459)
T PRK05965 335 VLRL--Y----HE--GGLLANGQKAGPRFAAGLD-ALRAHPL-VGDVRGRGLLGALELVADKATKTPFDAALDPADRIFD 404 (459)
T ss_pred HHHH--H----Hh--ccHHHHHHHHHHHHHHHHH-hhccCCC-EEEEeecceEEEEEEeccccccCCCCchhHHHHHHHH
Confidence 4421 1 10 1233444555555556665 431 110 1112233332211 1 10 0 12234
Q ss_pred HHHHcccEEEeCCC--eEEec---cCChhhHHHHHHHHHHHHHhc
Q 012238 427 NMTNKWHVYMTKDG--RISLA---GLSLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 427 ~ll~~~gI~v~~gg--Ris~~---~~~~~~i~~~~~~l~~~l~~~ 466 (467)
.++ ++||++.+.| -|.+. .++++++++++++|.++++++
T Consensus 405 ~~~-~~Gll~~~~g~~~i~~~PpL~it~~ei~~~~~~l~~~l~~~ 448 (459)
T PRK05965 405 RAY-ANGLVFRAFGDGVLGFAPALCCTEGEFDLIFERTRKTLDDV 448 (459)
T ss_pred HHH-hCCeEEEecCCcEEEEECCCcCCHHHHHHHHHHHHHHHHHH
Confidence 444 4699998865 24433 248899999999999998754
No 317
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.44 E-value=1.3e-10 Score=118.39 Aligned_cols=344 Identities=11% Similarity=0.044 Sum_probs=184.1
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCC-CCcC-CCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCC
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-NKEY-LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 159 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~-~~~Y-~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g 159 (467)
+...||+..|..-..-|. -.|.|.+++.+.++... ...+ .+..-..++-+.+++..-.. -+++.+ +++
T Consensus 45 G~~ylD~~~g~~~~~lGh--~~p~v~~ai~~ql~~l~~~~~~~~~~~~~~~la~~l~~~~p~~------~~~v~f--~~s 114 (442)
T PRK13360 45 GRRVLDGTAGLWCVNAGH--GRPEIVEAVRAQAGELDYAPAFQMGHPKAFELANRIAEIAPGG------LNHVFF--TNS 114 (442)
T ss_pred CCEEEECchhHHHhccCC--CCHHHHHHHHHHHHhCCCcccCCcCCHHHHHHHHHHHHhCCCC------CCEEEE--eCC
Confidence 457899987743111222 36778888888775411 1111 01112223334444432111 247888 999
Q ss_pred chhHHHHHHHHHHHhC-----C-CCEEEEcCCCCcchHHH-HhhCC------------CCeEEeeeecC-C--CCCC---
Q 012238 160 GTGSLRLAAALIERYF-----P-GAKVLISSPTWGNHKNI-FNDAR------------VPWSEYRYYDP-K--TVGL--- 214 (467)
Q Consensus 160 gt~al~l~~~~l~~~~-----~-gd~Vlv~~P~y~~~~~~-~~~~G------------~~~~~v~~~~~-~--~~~~--- 214 (467)
|++|.+.+.++..... + ..+|+....+|.+.... +...| -.+..+|.... . .+..
T Consensus 115 GseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 194 (442)
T PRK13360 115 GSESVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQP 194 (442)
T ss_pred cHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhccccCCChH
Confidence 9999999866544432 2 25799999888765321 11111 11222332100 0 0111
Q ss_pred -----ChhhHHHHHHcC-CCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHH
Q 012238 215 -----DFEGMIADIKAA-PGGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVR 287 (467)
Q Consensus 215 -----d~~~l~~~l~~~-~~~~~~i~i~~p~NPTG~~-~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~ 287 (467)
..+.+++.+... +++..++++-..+.-.|.. .+.+.+++|.++|++||+++|+||+..++.-.+ ..+..
T Consensus 195 ~~~~~~~~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG---~~~a~- 270 (442)
T PRK13360 195 EHGAELADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLG---APFAA- 270 (442)
T ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCc---cchhh-
Confidence 145677777543 2445566666555556665 467789999999999999999999987774211 11111
Q ss_pred HHHhcCCeEEEEecCccCcccCC-CccceEEEecCCHHHHhhhhhhhHHHHHHHHH---hhccCccCCCchHHHHHHHHH
Q 012238 288 LFATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARCCEVAVIQVKSQLK---RLARPMYSNPPVHGARIVANV 363 (467)
Q Consensus 288 ~~~~~~~~~i~~~S~SK~~~~~G-~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~ 363 (467)
....-.++++ +|+|.++ .| +.+|.++ .++++.+. +...-. ......+.+.+.++..++...
T Consensus 271 ~~~gv~PDiv---t~gK~l~-gG~~P~gav~---~~~~i~~~--------~~~~~~~~~~~~~~~T~~g~pl~~aaa~a~ 335 (442)
T PRK13360 271 QYFGVTPDLL---TCAKGLT-NGAIPMGAVF---VSSEIHDA--------FMQGPEAGIEFFHGYTYSGHPLACAAALAT 335 (442)
T ss_pred hhcCCCCcee---eeeeccc-cCccceEEEE---EcHHHHHH--------hhcCCccccccccCCCCCCCHHHHHHHHHH
Confidence 1112122333 6799997 56 6788874 67777665 211000 011122223455555555554
Q ss_pred hCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC-CCCCcccccCCcceEE---ecCC----C---HHHHHHHHHcc
Q 012238 364 VGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK-SGKDWSFILRQIGMFS---FTGL----N---KAQSDNMTNKW 432 (467)
Q Consensus 364 L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g-~~~~~~~~~~~~g~f~---~~~l----~---~~~~~~ll~~~ 432 (467)
|+- + ++ +...++.+++-+++.+.|+ ++. .+. +..+... |++. +... . .+...++++ +
T Consensus 336 L~~--l----~~--~~l~~~~~~~g~~l~~~l~-~l~~~~~-v~~vrG~-Gl~~~~~l~~~~~~~~~~~~~~~~~l~~-~ 403 (442)
T PRK13360 336 LDL--Y----ER--EGLLTRAARLAPYWEDALH-SLRDAPH-VIDIRNL-GLVGAVELAPRDGKPGKRAYEVFLKCFE-K 403 (442)
T ss_pred HHH--H----Hh--CCHHHHHHHHHHHHHHHHH-HhhcCCC-eeeeecc-ceEEEEEEecCCCCcchhHHHHHHHHHH-C
Confidence 431 1 11 1244455555566666665 442 111 1111222 2221 1111 1 133455555 6
Q ss_pred cEEEeCCC---eEEec-cCChhhHHHHHHHHHHHHHhc
Q 012238 433 HVYMTKDG---RISLA-GLSLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 433 gI~v~~gg---Ris~~-~~~~~~i~~~~~~l~~~l~~~ 466 (467)
||++.++| ||+.. .++++++++++++|.++++++
T Consensus 404 Gvl~~~~~~~lr~~Ppl~~t~~eid~~~~~l~~~l~~~ 441 (442)
T PRK13360 404 GLMIRYTGDILALSPPLIIEEAQIDELFDILAQALKET 441 (442)
T ss_pred CcEEEecCCEEEEeCCCccCHHHHHHHHHHHHHHHHHh
Confidence 99998876 77743 238899999999999999865
No 318
>PRK07481 hypothetical protein; Provisional
Probab=99.44 E-value=4.3e-10 Score=114.87 Aligned_cols=344 Identities=13% Similarity=0.076 Sum_probs=181.7
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCC-cC--CCCcchHHHHHHHHHHHhCCCCcccccCceeeeecC
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENK-EY--LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGL 158 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~-~Y--~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ 158 (467)
+.+.||+..|..-..-|. -.|.|.+++.+.+...... .+ .+.....++-+.+++.+... .-+++.+ ++
T Consensus 41 G~~ylD~~~g~~~~~lGh--~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~~lae~L~~~~~~~-----~~~~v~f--~~ 111 (449)
T PRK07481 41 GKKLLDGVGGLWNVNVGH--NREEVKEAIVRQLDELEYYSTFDGTTHPRAIELSYELIDMFAPE-----GMRRVFF--SS 111 (449)
T ss_pred CCEEEECchhHHhhcCCC--CCHHHHHHHHHHHHhccceecccccCCHHHHHHHHHHHHhcCCC-----CCCEEEE--cC
Confidence 457899977743122232 3577888888877542211 11 12222333444444442100 1357888 99
Q ss_pred CchhHHHHHHHHHHHhC-----CC-CEEEEcCCCCcchHHH-HhhCCC------------CeEEeeeecCC--CCC-CCh
Q 012238 159 SGTGSLRLAAALIERYF-----PG-AKVLISSPTWGNHKNI-FNDARV------------PWSEYRYYDPK--TVG-LDF 216 (467)
Q Consensus 159 ggt~al~l~~~~l~~~~-----~g-d~Vlv~~P~y~~~~~~-~~~~G~------------~~~~v~~~~~~--~~~-~d~ 216 (467)
+|++|.+.+.++..... +| .+|+...-+|.+.... +...|- .+..++..... .+. .|+
T Consensus 112 sGsEAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~ 191 (449)
T PRK07481 112 GGSDSVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQDP 191 (449)
T ss_pred chHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCCcccccccCCCCH
Confidence 99999999866554432 23 5789999888765432 211110 12222211000 011 134
Q ss_pred hhH--------HHHHH-cCCCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHH
Q 012238 217 EGM--------IADIK-AAPGGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSV 286 (467)
Q Consensus 217 ~~l--------~~~l~-~~~~~~~~i~i~~p~NPTG~~-~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~ 286 (467)
+.+ ++.+. ..+++...+++-..+.-.|.. ++.+-++++.++|++||+++|.||+..+|.-.+ ..+..
T Consensus 192 ~~~~~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG---~~~a~ 268 (449)
T PRK07481 192 EELARICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTG---SWFGS 268 (449)
T ss_pred HHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcCc---hhhHh
Confidence 333 33333 223455666666555555664 567789999999999999999999988874221 11111
Q ss_pred HHHHhcCCeEEEEecCccCcccCC-CccceEEEecCCHHHHhhhhhhhHHHHHHHHH---hhccCccCCCchHHHHHHHH
Q 012238 287 RLFATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARCCEVAVIQVKSQLK---RLARPMYSNPPVHGARIVAN 362 (467)
Q Consensus 287 ~~~~~~~~~~i~~~S~SK~~~~~G-~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~~~~~ 362 (467)
....-.+++++ ++|.++ .| +.+|.++ ..+++.+. +..... ......+.+.+.++..++..
T Consensus 269 -~~~gv~PDiv~---~gKgl~-gG~~Pi~av~---~~~~i~~~--------~~~~~~~~~~~~h~~T~~gnpl~~aaa~a 332 (449)
T PRK07481 269 -RGWGVKPDIMC---LAKGIT-SGYVPLGATM---VNARIADA--------FEANADFGGAIMHGYTYSGHPVACAAALA 332 (449)
T ss_pred -hhcCCCCCEEE---Eeeccc-CCCcCceEEE---EcHHHHHH--------HhccCccccccccCCCCCCCHHHHHHHHH
Confidence 11122234443 489987 67 4888885 66777665 211000 01111233445555555555
Q ss_pred HhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhc----cCCCCCcccccCCcceEE-ec--CC------C--H----H
Q 012238 363 VVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAK----DKSGKDWSFILRQIGMFS-FT--GL------N--K----A 423 (467)
Q Consensus 363 ~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~----~g~~~~~~~~~~~~g~f~-~~--~l------~--~----~ 423 (467)
.|+- +.+ +...++.++.-+++.+.|+ + .+. ...+...|-++. .+ +. + . .
T Consensus 333 ~L~~--l~~------~~l~~~~~~~g~~l~~~L~-~l~~~~~~---i~~vrG~Glm~gi~l~~~~~~~~~~~~~~~~~~~ 400 (449)
T PRK07481 333 TLDI--VVR------EDLPANAAKRGAYLLEGLQ-PLKERFEL---VGDVRGKGLMLALDLVADKATREPIDPSKGYANA 400 (449)
T ss_pred HHHH--HHh------hhHHHHHHHHHHHHHHHHH-HHhhcCCC---eEEEeecceEEEEEecccccccCCCCchhHHHHH
Confidence 5431 110 1233344444444555554 3 221 112223333321 11 10 1 1 2
Q ss_pred HHHHHHHcccEEEeCCC---eEEec-cCChhhHHHHHHHHHHHHHhc
Q 012238 424 QSDNMTNKWHVYMTKDG---RISLA-GLSLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 424 ~~~~ll~~~gI~v~~gg---Ris~~-~~~~~~i~~~~~~l~~~l~~~ 466 (467)
+...+++ +||++.+.| ||+.. .++++++++++++|.++++++
T Consensus 401 ~~~~~~~-~Gvl~~~~g~~i~l~Ppl~it~~eid~~~~~l~~~l~~~ 446 (449)
T PRK07481 401 VADVARE-NGVLVRPSGTKIILSPPLVIQREDVDRIVDALDAGLSAV 446 (449)
T ss_pred HHHHHHh-CCeEEEecCCEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 2344444 699998876 67643 248899999999999999875
No 319
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.44 E-value=3.6e-10 Score=116.52 Aligned_cols=346 Identities=13% Similarity=0.037 Sum_probs=184.0
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCC-cchHHHHHHHHHHHhCCCCcccccCceeeeecCCc
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPI-EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 160 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~-~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~gg 160 (467)
+.+.|||..|..-..-| .-.|.|.+++.+.++... . +... .+..+....+++.|...... ..-+++.+ +++|
T Consensus 88 G~~ylD~~sg~~~~~lG--h~hp~v~~Av~~ql~~~~-~-~~~~~~~~~~~~~~lae~L~~~~~~-~~~~~v~f--~~SG 160 (504)
T PLN02760 88 GKKYLDALAGLWCTALG--GSEPRLVAAATEQLNKLP-F-YHSFWNRTTKPSLDLAKELLEMFTA-RKMGKVFF--TNSG 160 (504)
T ss_pred CCEEEEcCcCHHhcccC--CCCHHHHHHHHHHHhhcc-c-eecccccCcHHHHHHHHHHHhhcCC-CCCCEEEE--eCCh
Confidence 45889998875322223 236788888888875421 1 1111 12223344455554332110 01247888 8999
Q ss_pred hhHHHHHHHHHHHh----C-CC-CEEEEcCCCCcchHH-HHhhCCCC------------eEEeeeecCCCCC--------
Q 012238 161 TGSLRLAAALIERY----F-PG-AKVLISSPTWGNHKN-IFNDARVP------------WSEYRYYDPKTVG-------- 213 (467)
Q Consensus 161 t~al~l~~~~l~~~----~-~g-d~Vlv~~P~y~~~~~-~~~~~G~~------------~~~v~~~~~~~~~-------- 213 (467)
++|.+.+.++.... . ++ .+|+...-+|..... .+...|.. +..++......+.
T Consensus 161 sEA~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 240 (504)
T PLN02760 161 SEANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPHYWRFHLPGETEEE 240 (504)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCCCcccccCCCCCcHHH
Confidence 99999985554322 1 22 578888888876533 22222221 1112210000000
Q ss_pred ---CChhhHHHHHHc-CCCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHH
Q 012238 214 ---LDFEGMIADIKA-APGGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRL 288 (467)
Q Consensus 214 ---~d~~~l~~~l~~-~~~~~~~i~i~~p~NPTG~~-~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~ 288 (467)
...+.+++.+.. .+....++++-..+.-.|.+ .+.+-+++|.++|++||+++|+||+..+|.--+ ..+.. .
T Consensus 241 ~~~~~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG---~~~a~-e 316 (504)
T PLN02760 241 FSTRLADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLG---TMFGC-D 316 (504)
T ss_pred HHHHHHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccc---hhhHH-H
Confidence 012346666642 22445566665555555665 467889999999999999999999987774221 12222 1
Q ss_pred HHhcCCeEEEEecCccCcccCC-CccceEEEecCCHHHHhhhhhhhHHHHHHHHH---hhccCccCCCchHHHHHHHHHh
Q 012238 289 FATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARCCEVAVIQVKSQLK---RLARPMYSNPPVHGARIVANVV 364 (467)
Q Consensus 289 ~~~~~~~~i~~~S~SK~~~~~G-~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~L 364 (467)
...-.++ +-.|+|.++ .| +.+|.++ .++++.+. +...-. ......+.+.++++..++.+.|
T Consensus 317 ~~gv~PD---ivtlgK~lg-gG~~PigAv~---~~~~i~d~--------~~~~~~~~~~~~h~~T~~gnPl~~Aaala~L 381 (504)
T PLN02760 317 KYNIKPD---LVSLAKALS-SAYMPIGAVL---VSPEISDV--------IHSQSNKLGSFAHGFTYSGHPVSCAVALEAL 381 (504)
T ss_pred hcCCCCc---EEEeccccc-CCccccceEe---ecHHHHhh--------hhcccccccCcccCCCCCCCHHHHHHHHHHH
Confidence 1122234 356789997 56 4788874 67777776 221000 0111223334555555655554
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc---CCCCCcccccCCcceEEe--cC-C--------C---H-HHHH
Q 012238 365 GNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD---KSGKDWSFILRQIGMFSF--TG-L--------N---K-AQSD 426 (467)
Q Consensus 365 ~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~---g~~~~~~~~~~~~g~f~~--~~-l--------~---~-~~~~ 426 (467)
+- + ++ +...++.+++-++|.+.|+ ++ ++ +..+...|.++.+ .+ - + . .+.+
T Consensus 382 e~--i----~~--~~l~~~~~~~g~~l~~~L~-~l~~~~~---v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~ 449 (504)
T PLN02760 382 KI--Y----KE--RNIPEHVNKIAPRFQDGIK-AFSGSPI---IGEIRGTGLILGTEFVDNKSPNDPFPAEWGVGAYFGA 449 (504)
T ss_pred HH--H----Hh--CCHHHHHHHHHHHHHHHHH-HHhcCCC---eeeEEeCceEEEEEEecCCcccccccchhHHHHHHHH
Confidence 31 1 11 1234444455555555554 33 21 1112233333321 11 0 0 1 1234
Q ss_pred HHHHcccEEEeCCC---eEEec-cCChhhHHHHHHHHHHHHHhc
Q 012238 427 NMTNKWHVYMTKDG---RISLA-GLSLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 427 ~ll~~~gI~v~~gg---Ris~~-~~~~~~i~~~~~~l~~~l~~~ 466 (467)
.+++ +||++.+.| ||+.. .+++++++++++++.++++.+
T Consensus 450 ~~~~-~Gvl~~~~g~~lrl~Ppl~it~eeid~~~~~l~~al~~~ 492 (504)
T PLN02760 450 ECKK-RGMLVRVAGDNIMMSPPLIITPEEVDELISIYGKALKAT 492 (504)
T ss_pred HHHh-CCcEEEecCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 5554 699998876 67743 238899999999999998754
No 320
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.43 E-value=3.9e-10 Score=115.43 Aligned_cols=343 Identities=8% Similarity=0.022 Sum_probs=185.2
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCC-C--CcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecC
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-N--KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGL 158 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~-~--~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ 158 (467)
+...||+..|..-..-|. -.|.|.+++.+.++... . ..| ......+|-+.+++..-. .-+++.+ ++
T Consensus 46 G~~ylD~~~g~~~~~lGh--~~p~v~~Ai~~ql~~l~~~~~~~~-~~~~~~~lae~L~~~~p~------~~~~v~f--~~ 114 (466)
T PRK07030 46 GKRYLDAVSSWWVNVFGH--ANPRINQRIKDQVDQLEHVILAGF-SHEPVIELSERLVKITPP------GLSRCFY--AD 114 (466)
T ss_pred CCEEEEcchhHHhhcCCC--CCHHHHHHHHHHHHhcCCcccccc-CCHHHHHHHHHHHHhCCC------CcCEEEE--eC
Confidence 357899987753112233 25778888888775421 0 122 222233344444443211 1258888 99
Q ss_pred CchhHHHHHHHHHHHh----C-C-CCEEEEcCCCCcchHHH-HhhCCC------------CeEEeeeecCC--CCCC---
Q 012238 159 SGTGSLRLAAALIERY----F-P-GAKVLISSPTWGNHKNI-FNDARV------------PWSEYRYYDPK--TVGL--- 214 (467)
Q Consensus 159 ggt~al~l~~~~l~~~----~-~-gd~Vlv~~P~y~~~~~~-~~~~G~------------~~~~v~~~~~~--~~~~--- 214 (467)
+|++|.+.+.++.... . + ..+|+...-+|.+.... +...|. .+..+|..+.. ..+.
T Consensus 115 sGsEAve~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~ 194 (466)
T PRK07030 115 NGSSAIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWE 194 (466)
T ss_pred CcHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCccccccCCCHH
Confidence 9999999986554333 1 2 35788889888765432 221121 12222221100 0011
Q ss_pred -----ChhhHHHHHHcCCCCcEEEEeCC-CCCCCCC-CCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHH
Q 012238 215 -----DFEGMIADIKAAPGGSFILLHGC-AHNPTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVR 287 (467)
Q Consensus 215 -----d~~~l~~~l~~~~~~~~~i~i~~-p~NPTG~-~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~ 287 (467)
+++.+++.+...+++...+++-. .+.-.|. .++.+.+++|.++|++||+++|.||+..+|.-.+ ..+..
T Consensus 195 ~~~~~~l~~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG---~~~a~- 270 (466)
T PRK07030 195 EHSRRMFAHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTG---TMFAC- 270 (466)
T ss_pred HHHHHHHHHHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCccc---cchHH-
Confidence 24556777765445555555544 2444566 4567889999999999999999999988875321 12222
Q ss_pred HHHhcCCeEEEEecCccCcccCC-CccceEEEecCCHHHHhhhhhhhHHHHHHHHH---hhccCccCCCchHHHHHHHHH
Q 012238 288 LFATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARCCEVAVIQVKSQLK---RLARPMYSNPPVHGARIVANV 363 (467)
Q Consensus 288 ~~~~~~~~~i~~~S~SK~~~~~G-~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~ 363 (467)
....-.++++++ +|.++ .| +.+|.++ ..+++.+. +..... ......+.+.+.++..++.+.
T Consensus 271 ~~~gv~PDiv~~---gKgl~-gG~~Pi~av~---~~~ei~~~--------~~~~~~~~~~~~h~~T~~gnpla~aaa~a~ 335 (466)
T PRK07030 271 EQAGIRPDFLCL---SKALT-GGYLPLAAVL---TTDTVYQA--------FYDDYPTLRAFLHSHSYTGNPLACAAALAT 335 (466)
T ss_pred HhcCCCCCEEee---ehhcc-CCcccceEEE---ecHHHHHH--------HhcccccccccccCCCCCCCHHHHHHHHHH
Confidence 112223454443 89998 78 4889885 77777665 211000 011112333455555565555
Q ss_pred hCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC-CCCCcccccCCcceEEecCC------------C----HHHHH
Q 012238 364 VGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK-SGKDWSFILRQIGMFSFTGL------------N----KAQSD 426 (467)
Q Consensus 364 L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g-~~~~~~~~~~~~g~f~~~~l------------~----~~~~~ 426 (467)
|+- + ++ +...++.+++-+++.+.|+ ++. .|. +..+...| +++-+.+ + ..+.+
T Consensus 336 L~~--i----~~--~~l~~~~~~~G~~l~~~L~-~l~~~~~-v~~vrG~G-l~~gie~~~~~~~~~~~~~~~~~~~~i~~ 404 (466)
T PRK07030 336 LDI--F----EQ--DNVIENNRALARRMAEATA-HLADHPH-VAEVRQTG-MILAIEMVQDKASKTPYPWQERRGLKVYQ 404 (466)
T ss_pred HHH--H----Hh--cCHHHHHHHHHHHHHHHHH-HHhcCCC-EEEeEece-eEEEEEeccCccccccCcchhHHHHHHHH
Confidence 431 1 10 1233444455555555555 431 111 11122333 3322211 0 12344
Q ss_pred HHHHcccEEEeCCC---eEEec-cCChhhHHHHHHHHHHHHHhc
Q 012238 427 NMTNKWHVYMTKDG---RISLA-GLSLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 427 ~ll~~~gI~v~~gg---Ris~~-~~~~~~i~~~~~~l~~~l~~~ 466 (467)
++++ +||++.+.| |+... .+++++++.+++++.++++++
T Consensus 405 ~~~~-~Gvl~~~~g~~i~~~Ppl~it~~eid~~~~~l~~al~~~ 447 (466)
T PRK07030 405 HALE-RGALLRPLGSVVYFLPPYVITPEQIDFLAEVASEGIDIA 447 (466)
T ss_pred HHHH-CCeEEEecCCEEEEECCccCCHHHHHHHHHHHHHHHHHH
Confidence 5554 699998865 55422 348899999999999999864
No 321
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.43 E-value=6.5e-11 Score=117.17 Aligned_cols=319 Identities=13% Similarity=0.066 Sum_probs=180.0
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCC--CCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCC
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE--NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 159 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~--~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g 159 (467)
+...+|+..|..-..-+. -+|.+.+++.+.++... ...| +.....+|.+.++++. + .+++++ +++
T Consensus 23 G~~ylD~~~g~~~~~lGh--~~p~v~~ai~~ql~~~~~~~~~~-~~~~~~~la~~l~~~~-~-------~~~v~~--~~S 89 (364)
T PRK04013 23 GRRYLDLIAGIGVNVLGH--NHPEWVEEMSEQLEKLVVAGPMF-EHEEKEEMLEELSKWV-N-------YEYVYM--GNS 89 (364)
T ss_pred CCEEEEcccChhhccCCC--CCHHHHHHHHHHHHhcCCccCCc-CCHHHHHHHHHHHhhc-C-------CCEEEE--eCc
Confidence 457899987753222233 25677788888775421 1123 3334455666666653 1 247888 999
Q ss_pred chhHHHHHHHHHHHhCCC-CEEEEcCCCCcchHHHHhh--------CCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCc
Q 012238 160 GTGSLRLAAALIERYFPG-AKVLISSPTWGNHKNIFND--------ARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGS 230 (467)
Q Consensus 160 gt~al~l~~~~l~~~~~g-d~Vlv~~P~y~~~~~~~~~--------~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~ 230 (467)
|++|++.+.++.... +| ++|+...-+|.......-. .+..+...++. ... ..|++.+++.+. ++.
T Consensus 90 GseA~e~Alklar~~-~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~-~~~-~~d~~~l~~~i~---~~~ 163 (364)
T PRK04013 90 GTEAVEAALKFARLY-TGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFK-HIP-FNDVEAAKEAIT---KET 163 (364)
T ss_pred hHHHHHHHHHHHHHH-hCCCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcE-Eec-CCCHHHHHHHhc---CCc
Confidence 999999986654444 45 8999999988765432222 11111110010 001 136788888886 456
Q ss_pred EEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccC
Q 012238 231 FILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY 309 (467)
Q Consensus 231 ~~i~i~~p~NPTG~~-~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~ 309 (467)
..+++...+...|.. .+.+.|++|.++|++||+++|+||+..++..+. .+... ...-.+++++ ++|.++ .
T Consensus 164 aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~RtG~----~~a~~-~~gv~PDiv~---~gK~lg-g 234 (364)
T PRK04013 164 AAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGLRTGK----FLAIE-HYKVEPDIVT---MGKGIG-N 234 (364)
T ss_pred EEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCCCc----hhHHH-hcCCCCCEEE---eccccc-C
Confidence 677766666555554 467789999999999999999999988874441 22221 1222344443 489998 6
Q ss_pred CCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHH
Q 012238 310 AERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQ 389 (467)
Q Consensus 310 G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~ 389 (467)
|+.+|.++ ...++ .. . ....+.+.+.++..++.+.|+- +.+ ++.+++.++.
T Consensus 235 G~P~~a~~---~~~~~-~~------------~---~~~~T~~gnp~~~aaa~a~l~~--i~~--~~l~~~~~~~------ 285 (364)
T PRK04013 235 GVPVSLTL---TNFDV-ER------------G---KHGSTFGGNPLACKAVAVTLRI--LRR--ERLVEKAGEK------ 285 (364)
T ss_pred CceeEEEE---ecccc-cC------------C---CcCCCCCcCHHHHHHHHHHHHH--HHh--ccHHHHHHHH------
Confidence 88899885 33332 11 1 1122334555555555554431 100 0111121111
Q ss_pred HHHHHhhhccCCCCCcccccCCcceEEecCCC--H-HHHHHHHHcccEEEeCCC----eEEec-cCChhhHHHHHHHHHH
Q 012238 390 KLFDSLSAKDKSGKDWSFILRQIGMFSFTGLN--K-AQSDNMTNKWHVYMTKDG----RISLA-GLSLAKCEYLADAIID 461 (467)
Q Consensus 390 ~l~~~l~~~~g~~~~~~~~~~~~g~f~~~~l~--~-~~~~~ll~~~gI~v~~gg----Ris~~-~~~~~~i~~~~~~l~~ 461 (467)
+ +.+. . .. +..+... |+++-+.+. . ...+.+++ +|+++.+.| ||.-. .++++++++++++|.+
T Consensus 286 -l-~~l~-~-~~---v~~vRG~-Gl~~gve~~~~~~~i~~~~~~-~Gll~~~~g~~vlr~~Ppl~it~~~i~~~~~~l~~ 356 (364)
T PRK04013 286 -F-IEIK-G-ER---VVTTRGR-GLMIGIVLKKPVGKYVEELQN-RGYLVHTAGQRVIRLLPPLIISKDTMEEAKSAIEG 356 (364)
T ss_pred -H-HHhc-c-Cc---ceeeeeC-cEEEEEEeCCcHHHHHHHHHh-CCcEEeeCCCCEEEEeCCcccCHHHHHHHHHHHHH
Confidence 2 1222 1 10 1112233 334333221 2 33445554 699998765 66543 2488999999999999
Q ss_pred HHHhc
Q 012238 462 SYHNV 466 (467)
Q Consensus 462 ~l~~~ 466 (467)
+++++
T Consensus 357 ~l~~~ 361 (364)
T PRK04013 357 VINDI 361 (364)
T ss_pred HHHHH
Confidence 98764
No 322
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.42 E-value=2e-11 Score=127.86 Aligned_cols=176 Identities=14% Similarity=0.088 Sum_probs=116.5
Q ss_pred CCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEE
Q 012238 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSE 203 (467)
Q Consensus 124 ~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~ 203 (467)
|..-+.+..+.+|+.++.+ .-.++ ++|+|.++..+ +++.+.+||+|++...|+-.....+...|+.+++
T Consensus 193 ~~G~i~eAe~~AA~~fgAd-------~tyfv--vNGTS~~n~av--~~a~~~~Gd~VLvdRN~HKSv~haLilsga~PVY 261 (714)
T PRK15400 193 HSGPHKEAEEYIARVFNAD-------RSYMV--TNGTSTANKIV--GMYSAPAGSTVLIDRNCHKSLTHLMMMSDVTPIY 261 (714)
T ss_pred CChHHHHHHHHHHHHhCCC-------cEEEE--eCchHHHHHHH--HHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEE
Confidence 3434566666677764332 23444 79999999887 6777889999999999998888899999999999
Q ss_pred eeeecCCCC----CCC-----hhhHHHHHHcCCCCc--EEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCC
Q 012238 204 YRYYDPKTV----GLD-----FEGMIADIKAAPGGS--FILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ 272 (467)
Q Consensus 204 v~~~~~~~~----~~d-----~~~l~~~l~~~~~~~--~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~ 272 (467)
++..- +.+ +++ .+.+++.+++.+... +.+++++| +=-|++++.++ |++.|..++ |++||||.
T Consensus 262 l~P~r-n~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~p-TYdG~~yd~~~---I~~~~~~~~--ilvDEAwg 334 (714)
T PRK15400 262 FRPTR-NAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYNTDF---IKKTLDVKS--IHFDSAWV 334 (714)
T ss_pred ecccc-cccCCccCCCccccCHHHHHHHHHhCccccCccEEEEECC-CCccEecCHHH---HHHHhCCCC--EEEEccch
Confidence 85432 222 345 899999998765322 24555544 33499998774 555576666 68999986
Q ss_pred CC-CCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEe
Q 012238 273 GF-ASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVV 319 (467)
Q Consensus 273 ~~-~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v 319 (467)
.. .|.+.-.+..++....+.++.++++.|.+|.+ +|+.-+.++++
T Consensus 335 ah~~F~p~~~~~sam~~ga~~~~~i~vtQStHKtL--~alTQaS~LHv 380 (714)
T PRK15400 335 PYTNFSPIYEGKCGMSGGRVEGKVIYETQSTHKLL--AAFSQASMIHV 380 (714)
T ss_pred hhhccCcccCCcChhhcCCCCCCceEEEEchhhcc--cchhHHhHHHH
Confidence 54 33321111222211112235679999999997 56766666544
No 323
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.42 E-value=6.4e-11 Score=108.00 Aligned_cols=316 Identities=15% Similarity=0.101 Sum_probs=181.5
Q ss_pred CCcEEecCcccCCCCCCCCchHHHHHHHHHHHhc---CC-----CCcCCCCcchHHHHHHHHHHHhCCCCcccccCceee
Q 012238 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER---GE-----NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVAT 154 (467)
Q Consensus 83 ~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~---~~-----~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~ 154 (467)
.+++||+...|. +... .|.+.++-..++++ +. ..+| ..-...|...||++ +++ ++-|+-
T Consensus 67 k~ilnFcaNnYL---GLss-hPeii~a~~~aleeyGaGlssvrfIcGt--q~iHk~LE~kiAqf-h~r------ED~ily 133 (417)
T KOG1359|consen 67 KKILNFCANNYL---GLSS-HPEIINAGQKALEEYGAGLSSVRFICGT--QDIHKLLESKIAQF-HGR------EDTILY 133 (417)
T ss_pred cceeeecccccc---cccC-ChHHHHHHHHHHHHhCCCccceeEEecc--hHHHHHHHHHHHHH-hCC------CceEEe
Confidence 478999988874 3332 56677766666643 11 0112 11245677788888 554 444544
Q ss_pred eecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcC-CCCcEEE
Q 012238 155 VQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA-PGGSFIL 233 (467)
Q Consensus 155 ~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~-~~~~~~i 233 (467)
+.+-.|..-+ +-+.+.|.|.|+--.--+....+-++.+. ...-.|+-.++..+... ..+-+++
T Consensus 134 ---pscfdANag~--feail~pedAvfSDeLNhASIIdGirLck-----------ry~h~dv~~l~~~l~~a~k~r~klv 197 (417)
T KOG1359|consen 134 ---PSCFDANAGA--FEAILTPEDAVFSDELNHASIIDGIRLCK-----------RYRHVDVFDLEHCLISACKMRLKLV 197 (417)
T ss_pred ---ccccccchHH--HHHhcChhhhhhccccccchhhhhhHHHh-----------hhccchhHHHHHHHHHhhhheEEEE
Confidence 4444444333 33446677777655554444444444332 11125666666555432 2466677
Q ss_pred EeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHH-hcCCeEEEEecCccCcc-cCCC
Q 012238 234 LHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFA-TRGMELLVAQSYSKNLG-LYAE 311 (467)
Q Consensus 234 ~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~S~SK~~~-~~G~ 311 (467)
+....-.-.|-+.|.+ +|.+++++||.++++||++..+.++.- ........ -.++..++.++++|.+| ..|
T Consensus 198 ~TDg~FSMDGdiaPl~---ei~~La~kYgaLlfiDecHaTgf~G~t---GrGt~E~~~vm~~vdiinsTLgKAlGga~G- 270 (417)
T KOG1359|consen 198 VTDGVFSMDGDIAPLE---EISQLAKKYGALLFIDECHATGFFGET---GRGTAEEFGVMGDVDIINSTLGKALGGASG- 270 (417)
T ss_pred EecceeccCCCcccHH---HHHHHHHhcCcEEEEeecccceeecCC---CCChHHHhCCCCcceehhhhhhhhhcCCCC-
Confidence 7666666677776655 777779999999999999887766531 11222222 24567788999999997 444
Q ss_pred ccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCc-cCC--CchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHH
Q 012238 312 RIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPM-YSN--PPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVR 388 (467)
Q Consensus 312 RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~--~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r 388 (467)
||. ++++.++.- ++.-.+++ +++ ||++.. .+..++ ++ .-.-.+...+.+.+-
T Consensus 271 --Gyt---tgp~~li~l------------lrqr~RpylFSnslppavV~-~a~ka~---dl----lm~s~~~i~~~~a~~ 325 (417)
T KOG1359|consen 271 --GYT---TGPKPLISL------------LRQRSRPYLFSNSLPPAVVG-MAAKAY---DL----LMVSSKEIQSRQANT 325 (417)
T ss_pred --CCc---cCChhHHHH------------HHhcCCceeecCCCChhhhh-hhHHHH---HH----HHhhHHHHHHHHHHH
Confidence 898 599988886 55444443 332 222221 111111 11 000123445555666
Q ss_pred HHHHHHhhhccCCCCCcccccCCcce-EEecCC---CHHHHHHHHHcccEEEeCC-------C----eEEecc-CChhhH
Q 012238 389 QKLFDSLSAKDKSGKDWSFILRQIGM-FSFTGL---NKAQSDNMTNKWHVYMTKD-------G----RISLAG-LSLAKC 452 (467)
Q Consensus 389 ~~l~~~l~~~~g~~~~~~~~~~~~g~-f~~~~l---~~~~~~~ll~~~gI~v~~g-------g----Ris~~~-~~~~~i 452 (467)
+++++.++ ..| +......... -+.+|. .....++||+. ||+|..- | |+.++. .+++++
T Consensus 326 qrfr~~me-~aG----ftIsg~~hPI~pv~lGda~lA~~~ad~lLk~-Gi~Vigfs~PvVP~gkariRVqiSAaHt~edi 399 (417)
T KOG1359|consen 326 QRFREFME-AAG----FTISGASHPICPVMLGDARLASKMADELLKR-GIYVIGFSYPVVPKGKARIRVQISAAHTEEDI 399 (417)
T ss_pred HHHHHHHH-hcC----ceecCCCCCccceecccHHHHHHHHHHHHhc-CceEEeecCCcCCCCceEEEEEEehhcCHHHH
Confidence 67777776 666 3333221111 133342 34557788875 9987432 4 555542 388999
Q ss_pred HHHHHHHHHHHHh
Q 012238 453 EYLADAIIDSYHN 465 (467)
Q Consensus 453 ~~~~~~l~~~l~~ 465 (467)
+++++++.++.+.
T Consensus 400 d~~i~Af~~vgr~ 412 (417)
T KOG1359|consen 400 DRLIEAFSEVGRF 412 (417)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998764
No 324
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.42 E-value=5.1e-10 Score=114.13 Aligned_cols=343 Identities=12% Similarity=0.012 Sum_probs=185.1
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCC-C--CcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecC
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-N--KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGL 158 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~-~--~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ 158 (467)
+.+.||+..|.--..-|. -.|.|.+++.+.++... . ..| ......++-+.+++.... .-+++.+ ++
T Consensus 48 G~~ylD~~~g~~~~~lGh--~~p~v~~ai~~ql~~l~~~~~~~~-~~~~~~~la~~L~~~~p~------~~~~v~f--~~ 116 (445)
T PRK09221 48 GRKILDGTAGLWCCNAGH--GRPEIVEAVARQAATLDYAPAFQM-GHPLAFELAERLAELAPG------GLDHVFF--TN 116 (445)
T ss_pred CCEEEEccccHhhccCCC--CCHHHHHHHHHHHHhccCcccccc-CCHHHHHHHHHHHHhCCC------CCCEEEE--eC
Confidence 357899987743112232 36778888887775411 0 111 122222344444443211 0257888 99
Q ss_pred CchhHHHHHHHHHHHhC-----C-CCEEEEcCCCCcchHHHHh-hCC------------CCeEEeeeec--CC-CCCC--
Q 012238 159 SGTGSLRLAAALIERYF-----P-GAKVLISSPTWGNHKNIFN-DAR------------VPWSEYRYYD--PK-TVGL-- 214 (467)
Q Consensus 159 ggt~al~l~~~~l~~~~-----~-gd~Vlv~~P~y~~~~~~~~-~~G------------~~~~~v~~~~--~~-~~~~-- 214 (467)
+|++|.+.+.++...+. + ..+|+....+|.+.....- ..| ..+..+|... .. .+..
T Consensus 117 sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (445)
T PRK09221 117 SGSESVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKGQ 196 (445)
T ss_pred CcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCccccccccCCCh
Confidence 99999999866544432 1 2478888888876532211 111 1122232210 00 0111
Q ss_pred ------ChhhHHHHHHcCC-CCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHH
Q 012238 215 ------DFEGMIADIKAAP-GGSFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSV 286 (467)
Q Consensus 215 ------d~~~l~~~l~~~~-~~~~~i~i~~p~NPTG~~~-~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~ 286 (467)
..+.+++.++..+ ++...+++-..+.-.|... +.+-+++|.++|++||+++|+||+..+|.-.+ ..+..
T Consensus 197 ~~~~~~~~~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG---~~~~~ 273 (445)
T PRK09221 197 PEHGAELADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLG---AAFAA 273 (445)
T ss_pred HHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcCc---hhhHH
Confidence 1356777776432 4555666666666667754 56779999999999999999999987764211 11212
Q ss_pred HHHHhcCCeEEEEecCccCcccCC-CccceEEEecCCHHHHhhhhhhhHHHHHHHH---HhhccCccCCCchHHHHHHHH
Q 012238 287 RLFATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARCCEVAVIQVKSQL---KRLARPMYSNPPVHGARIVAN 362 (467)
Q Consensus 287 ~~~~~~~~~~i~~~S~SK~~~~~G-~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l---~~~~~~~~~~~~~~~~~~~~~ 362 (467)
.. ..-.+++ -.++|.++ .| +.+|.++ .++++.+. +...- .......+.+.+.++..++..
T Consensus 274 ~~-~gv~PDi---~~~gK~l~-gG~~Pi~av~---~~~~i~~~--------~~~~~~~~~~~~~~~T~~~~pl~~aaa~a 337 (445)
T PRK09221 274 ER-FGVTPDI---ITFAKGLT-NGAIPMGAVI---ASDEIYDA--------FMQGPEYAIEFFHGYTYSAHPVACAAGLA 337 (445)
T ss_pred Hh-cCCCCCE---EEeccccc-cCcccceeeE---EcHHHHHh--------hccCcccccccccccCCCcCHHHHHHHHH
Confidence 11 1112232 36789997 45 5688874 67777765 21100 001111222345555455544
Q ss_pred HhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-CCCCCcccccCCcceEEecCC------C----HHHHHHHHHc
Q 012238 363 VVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD-KSGKDWSFILRQIGMFSFTGL------N----KAQSDNMTNK 431 (467)
Q Consensus 363 ~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~-g~~~~~~~~~~~~g~f~~~~l------~----~~~~~~ll~~ 431 (467)
.|+. + ++ +...++.+++-+++.+.|+ ++ +.+. +..+... |.++-+.+ + ....+.+++
T Consensus 338 ~L~~--i----~~--~~l~~~~~~~g~~l~~~l~-~l~~~~~-v~~vrg~-Gl~~~v~~~~~~~~~~~~~~~~~~~~~~- 405 (445)
T PRK09221 338 TLDI--Y----RE--EDLFERAAELAPYFEDAVH-SLKGLPH-VIDIRNI-GLVAGIELAPRPGAPGARGYEAFMKCFE- 405 (445)
T ss_pred HHHH--H----Hh--ccHHHHHHHHHHHHHHHHH-hhccCCC-EEEEecC-ceEEEEEEecccccccchHHHHHHHHHH-
Confidence 4421 1 11 1345566666677777776 54 2111 1112222 22221111 1 123445554
Q ss_pred ccEEEeCCC---eEEec-cCChhhHHHHHHHHHHHHHhc
Q 012238 432 WHVYMTKDG---RISLA-GLSLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 432 ~gI~v~~gg---Ris~~-~~~~~~i~~~~~~l~~~l~~~ 466 (467)
+||++.++| ||+.. .++++++++++++|++++.++
T Consensus 406 ~Gv~~~~~~~~lr~~Ppl~~t~~eid~~~~~l~~~l~~~ 444 (445)
T PRK09221 406 KGLLVRYTGDTIALSPPLIIEKAQIDELVDALGDALRAV 444 (445)
T ss_pred CCeEEeecCCEEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence 699998876 77643 238899999999999999765
No 325
>PRK07678 aminotransferase; Validated
Probab=99.41 E-value=6.4e-10 Score=113.66 Aligned_cols=343 Identities=10% Similarity=0.032 Sum_probs=180.7
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCC--cCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCC
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENK--EYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 159 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~--~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g 159 (467)
+.+.||+..|..-..-|. -.|.|.+++.+.++..... .| +..-..+|-+.+++.+.. .+.+.+ +++
T Consensus 46 G~~ylD~~~g~~~~~lGh--~~p~v~~ai~~q~~~~~~~~~~~-~~~~~~~lae~l~~~~~~-------~~~v~f--~~s 113 (451)
T PRK07678 46 GNRYLDGMSGLWCVNVGY--GRKELAEAAYEQLKTLSYFPLTQ-SHEPAIKLAEKLNEWLGG-------EYVIFF--SNS 113 (451)
T ss_pred CCEEEEccccHHhhcCCC--CCHHHHHHHHHHHHhcCcccccc-CCHHHHHHHHHHHHhCCC-------CCEEEE--eCC
Confidence 457899987753122232 3677888888877542111 12 222223444444444211 247888 999
Q ss_pred chhHHHHHHHHHHHhC-----CC-CEEEEcCCCCcchHHHHh-hCCC------------CeEEeeeecCCC--CC-----
Q 012238 160 GTGSLRLAAALIERYF-----PG-AKVLISSPTWGNHKNIFN-DARV------------PWSEYRYYDPKT--VG----- 213 (467)
Q Consensus 160 gt~al~l~~~~l~~~~-----~g-d~Vlv~~P~y~~~~~~~~-~~G~------------~~~~v~~~~~~~--~~----- 213 (467)
|++|.+.+.++..... +| .+|+...-+|.+...... ..|. .+..+|..+... ++
T Consensus 114 GseA~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (451)
T PRK07678 114 GSEANETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDCYRMPGIESEDI 193 (451)
T ss_pred cHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCCccccccccCChHH
Confidence 9999999866554432 23 578888888876543222 1111 122222210000 00
Q ss_pred CC---hhhHHHHHH-cCCCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHH
Q 012238 214 LD---FEGMIADIK-AAPGGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRL 288 (467)
Q Consensus 214 ~d---~~~l~~~l~-~~~~~~~~i~i~~p~NPTG~~-~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~ 288 (467)
.| .+.+++.++ ..+++...+++-..+.-.|.+ ++.+-++++.++|++||+++|.||+..+|.-.+ ..+....
T Consensus 194 ~~~~~~~~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG---~~~~~~~ 270 (451)
T PRK07678 194 YDLECVKEIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTG---KAFGFMN 270 (451)
T ss_pred HHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCc---hhHHHHh
Confidence 01 123455564 223455666665555445665 567889999999999999999999987884321 1222211
Q ss_pred HHhcCCeEEEEecCccCcccCC-CccceEEEecCCHHHHhhhhhhhHHHHHHHHH--hhccCccCCCchHHHHHHHHHhC
Q 012238 289 FATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARCCEVAVIQVKSQLK--RLARPMYSNPPVHGARIVANVVG 365 (467)
Q Consensus 289 ~~~~~~~~i~~~S~SK~~~~~G-~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~L~ 365 (467)
..-.++++ .++|.++ .| +.+|.++ ..+++.+. +..... ......+.+.++++..++.+.|+
T Consensus 271 -~gv~PDiv---t~gK~lg-gG~~Pi~av~---~~~~i~~~--------~~~~~~~~~~~h~~T~~gnp~~~aaa~a~l~ 334 (451)
T PRK07678 271 -YGVKPDII---TMAKGIT-SAYLPLSATA---VKKEIYEA--------FKGKGEYEHFRHVNTFGGNPAACALALKNLE 334 (451)
T ss_pred -cCCCCCEE---Eeecccc-cCCcceeEEE---EcHHHHHH--------HhccCcccccccCCCCCcCHHHHHHHHHHHH
Confidence 12223444 5689998 66 6888885 67777765 211000 01112233445555555555543
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhh---ccCCCCCcccccCCcceEE-ec--C------CCH----HHHHHHH
Q 012238 366 NPALFDEWKAEMEMMAGRIKNVRQKLFDSLSA---KDKSGKDWSFILRQIGMFS-FT--G------LNK----AQSDNMT 429 (467)
Q Consensus 366 ~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~---~~g~~~~~~~~~~~~g~f~-~~--~------l~~----~~~~~ll 429 (467)
. +. + +...++.++.-++|.+.|++ +.+. ...+...|.++- .+ + .+. .+...++
T Consensus 335 ~--l~----~--~~~~~~~~~~g~~l~~~l~~~~~~~~~---v~~vrg~Gl~~~i~~~~~~~~~~~~~~~~a~~i~~~l~ 403 (451)
T PRK07678 335 I--ME----N--ENLIERSAQLGELLLEQLKEELGEHPL---VGDIRGKGLLVGIELVNDKETKEPADNDKVASVVAACK 403 (451)
T ss_pred H--HH----h--CCHHHHHHHHHHHHHHHHHHHHhcCCC---EEEEEeeceEEEEEEecCCcccCcCchHHHHHHHHHHH
Confidence 1 11 0 02223333333444444430 3332 111233333331 11 1 011 2234455
Q ss_pred HcccEEEeCC-------C---eEEec-cCChhhHHHHHHHHHHHHHhcC
Q 012238 430 NKWHVYMTKD-------G---RISLA-GLSLAKCEYLADAIIDSYHNVS 467 (467)
Q Consensus 430 ~~~gI~v~~g-------g---Ris~~-~~~~~~i~~~~~~l~~~l~~~~ 467 (467)
+ +||++.+. + ||+.. .+++++++++++++.++++++.
T Consensus 404 ~-~Gv~~~~~g~~v~~~~~~lrl~Ppl~it~~eid~~~~~l~~~l~~~~ 451 (451)
T PRK07678 404 E-KGLIIGKNGDTVAGYNNVLTLSPPLVISSEEIAFIVGTLKTALERIK 451 (451)
T ss_pred H-CCcEEeecCccccCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHhcC
Confidence 4 69998653 2 55533 3488999999999999998763
No 326
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.41 E-value=1.1e-09 Score=112.18 Aligned_cols=347 Identities=12% Similarity=0.034 Sum_probs=182.3
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcC-CC--CcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecC
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-EN--KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGL 158 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~-~~--~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ 158 (467)
+...||+..|.--..-|. -.|.|.+++.+.++.- .. ..| +..-..+|-+.+++.+....+. -.-+++.+ ++
T Consensus 63 G~~ylD~~~g~~~~~lGh--~~p~i~~Ai~~q~~~l~~~~~~~~-~~~~~~~lae~L~~~~p~~~~~-~~~~~v~f--~~ 136 (472)
T PRK08742 63 GRRYLDAVSSWWTNLFGH--AEPRIGAAIAAQAGELEQVMLAGF-THEPAVQLAEQLLAIAPRQDGR-APLSKVFY--AD 136 (472)
T ss_pred CCEEEEcCccHHhccCCC--CCHHHHHHHHHHHHhCCCcccccc-CCHHHHHHHHHHHHhCCCcccC-CCCCEEEE--eC
Confidence 457899988743222233 3677888887776431 11 112 1222233334444432111000 01248888 99
Q ss_pred CchhHHHHHHHHHHHhC-----C-CCEEEEcCCCCcchHHHHh-hCCC------------CeEEeeeecCC--CCCC---
Q 012238 159 SGTGSLRLAAALIERYF-----P-GAKVLISSPTWGNHKNIFN-DARV------------PWSEYRYYDPK--TVGL--- 214 (467)
Q Consensus 159 ggt~al~l~~~~l~~~~-----~-gd~Vlv~~P~y~~~~~~~~-~~G~------------~~~~v~~~~~~--~~~~--- 214 (467)
+|++|.+.+.++...+. + ..+|+...-+|.+...... ..|. .+..+|..+.. ..+.
T Consensus 137 sGSEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~ 216 (472)
T PRK08742 137 NGSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAE 216 (472)
T ss_pred CchHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCCCCccccccCCCHH
Confidence 99999999866654441 2 2589999988876543222 1111 12222221100 0111
Q ss_pred -----ChhhHHHHHHcCCCCcEEEEeCC-CCCCCCC-CCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHH
Q 012238 215 -----DFEGMIADIKAAPGGSFILLHGC-AHNPTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVR 287 (467)
Q Consensus 215 -----d~~~l~~~l~~~~~~~~~i~i~~-p~NPTG~-~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~ 287 (467)
+++.+++.+...+.....+++-. .+.-.|. .++.+.++++.++|++||+++|.||+..+|.-.+ ..+...
T Consensus 217 ~~~~~~~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGRtG---~~~a~e 293 (472)
T PRK08742 217 DYALQAADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRTG---TLFACE 293 (472)
T ss_pred HHHHHHHHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCc---cchHHH
Confidence 24666777764444555665554 3556676 5678889999999999999999999988885321 122221
Q ss_pred HHHhcCCeEEEEecCccCcccCCC-ccceEEEecCCHHHHhhhhhhhHHHHHHHHH--hhccCccCCCchHHHHHHHHHh
Q 012238 288 LFATRGMELLVAQSYSKNLGLYAE-RIGAMNVVCSSSDLAARCCEVAVIQVKSQLK--RLARPMYSNPPVHGARIVANVV 364 (467)
Q Consensus 288 ~~~~~~~~~i~~~S~SK~~~~~G~-RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~L 364 (467)
. ..-.++++++ +|.++ .|. .+|.++ ..+++.+. +..... ......+.+.+.++..++.+.|
T Consensus 294 ~-~gv~PDiv~~---gKgl~-gG~~Plaav~---~~~ei~~~--------~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L 357 (472)
T PRK08742 294 Q-AGVMPDLLCL---SKGLT-GGFLPLSAVL---ATQQLYDA--------FLDDSRERAFLHSHSYTGNPLACAAALATL 357 (472)
T ss_pred h-cCCCCCEEEE---ccccc-CCCCCcceee---ccHHHHHH--------hhccCccCccCcCCCCCccHHHHHHHHHHH
Confidence 1 1223455543 89998 674 788885 77777665 211000 0011123334555555555554
Q ss_pred C---ChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceEEe--cC-C------C------HHHHH
Q 012238 365 G---NPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSF--TG-L------N------KAQSD 426 (467)
Q Consensus 365 ~---~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~~~g~f~~--~~-l------~------~~~~~ 426 (467)
+ ++.+ .+...++.++++ + +.+.+. +.+. +..+...|-++.+ .. - . ....+
T Consensus 358 ~~i~~~~l----~~~~~~~g~~l~---~-~~~~~~-~~~~---i~dvRG~Gl~~giel~~~~~~~~~~~~~~~~~~~~~~ 425 (472)
T PRK08742 358 DIFADDDV----IARNQPTAARMT---Q-LAAQIG-EHPH---VADVRQAGMVVAFELTRGGNKRTPFPPAARVGLHAYR 425 (472)
T ss_pred HHHHHCCH----HHHHHHHHHHHH---H-HHHHHh-cCCC---eeeEeccceEEEEEeccCccccccCCchhHHHHHHHH
Confidence 3 1111 111222222222 1 222233 3322 1222333333311 11 0 1 11234
Q ss_pred HHHHcccEEEeCCC---eEEec-cCChhhHHHHHHHHHHHHHhc
Q 012238 427 NMTNKWHVYMTKDG---RISLA-GLSLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 427 ~ll~~~gI~v~~gg---Ris~~-~~~~~~i~~~~~~l~~~l~~~ 466 (467)
++++ +||++.+.| ||.-. .++++++++++++|.++++++
T Consensus 426 ~~~~-~Gll~~~~g~vi~~~PpL~it~~ei~~~~~~l~~~l~~~ 468 (472)
T PRK08742 426 AALA-RGVVLRPLGDVLYWMPPYCVDEAQLALLADTTRHAIDEA 468 (472)
T ss_pred HHHH-CCeEEEecCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 5554 699999876 55533 248899999999999999763
No 327
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.40 E-value=8.9e-10 Score=112.80 Aligned_cols=345 Identities=8% Similarity=0.005 Sum_probs=186.3
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCC-C-CcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCC
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-N-KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 159 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~-~-~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g 159 (467)
+.+.||+..|.....-|. -.|.|.+++.+.++... . ..+.......+|-+.+++..-. .-+++.+ +++
T Consensus 55 G~~ylD~~~g~~~~~lGh--~~p~v~~Ai~~ql~~l~~~~~~~~~~~~~~~lae~L~~~~p~------~~~~v~f--~~S 124 (460)
T PRK06916 55 GNEYYDGVSSIWLNVHGH--QVPELDEAIREQLNKIAHSTLLGLANVPSILLAEKLIEVVPE------GLKKVFY--SDS 124 (460)
T ss_pred CCEEEEcchhHHHhhcCC--CCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCCC------CCCEEEE--eCC
Confidence 457899877643111232 36778888888775411 1 1111233333444555554211 1257888 999
Q ss_pred chhHHHHHHHHHHHh-----CCC-CEEEEcCCCCcchHHH-HhhCCC------------CeEEeeeecCC--CCC-----
Q 012238 160 GTGSLRLAAALIERY-----FPG-AKVLISSPTWGNHKNI-FNDARV------------PWSEYRYYDPK--TVG----- 213 (467)
Q Consensus 160 gt~al~l~~~~l~~~-----~~g-d~Vlv~~P~y~~~~~~-~~~~G~------------~~~~v~~~~~~--~~~----- 213 (467)
|++|.+.+.++.... .+| .+|+...-+|.+.... +...|. .+..+|..+.. .++
T Consensus 125 GseAve~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~ 204 (460)
T PRK06916 125 GATAVEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAE 204 (460)
T ss_pred cHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCcccccccCCChHH
Confidence 999999986654432 233 5889999888764332 222221 12223221000 011
Q ss_pred ---CChhhHHHHHHcCCCCcEEEEeCC-CCCCCCCC-CCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHH
Q 012238 214 ---LDFEGMIADIKAAPGGSFILLHGC-AHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRL 288 (467)
Q Consensus 214 ---~d~~~l~~~l~~~~~~~~~i~i~~-p~NPTG~~-~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~ 288 (467)
-+++.+++.++..+++...+++-. .+.-.|.+ ++.+-+++|.++|++||+++|.||+..+|.-.+ ..+.. .
T Consensus 205 ~~~~~~~~l~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~GRtG---~~~a~-~ 280 (460)
T PRK06916 205 IVKKHLEELEELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRTG---KMFAC-E 280 (460)
T ss_pred HHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCcCc---hhhHH-H
Confidence 135666777765445555666554 35556765 588899999999999999999999987773221 12222 1
Q ss_pred HHhcCCeEEEEecCccCcccCC-CccceEEEecCCHHHHhhhhhhhHHHHHHHH---HhhccCccCCCchHHHHHHHHHh
Q 012238 289 FATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARCCEVAVIQVKSQL---KRLARPMYSNPPVHGARIVANVV 364 (467)
Q Consensus 289 ~~~~~~~~i~~~S~SK~~~~~G-~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l---~~~~~~~~~~~~~~~~~~~~~~L 364 (467)
...-.++++ .++|.++ .| +.+|.++ ..+++.+. +.... .......+.+.+.++..++...|
T Consensus 281 ~~gv~PDiv---~~gK~l~-gG~~Pi~av~---~~~ei~~~--------~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l 345 (460)
T PRK06916 281 HENVTPDIM---TAGKGLT-GGYLPIAITV---TTDEIYNA--------FYGDYEEQKTFFHGHSYTGNPLGCAVALANL 345 (460)
T ss_pred hcCCCCCee---eeehhhh-cCccccceee---ecHHHHHH--------hhccccccCccccCCCCCCCHHHHHHHHHHH
Confidence 112223444 4689998 77 5889885 67777665 21100 01111112234555555555554
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC-CCCCcccccCCcceEEe-c--CC--------C----HHHHHHH
Q 012238 365 GNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK-SGKDWSFILRQIGMFSF-T--GL--------N----KAQSDNM 428 (467)
Q Consensus 365 ~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g-~~~~~~~~~~~~g~f~~-~--~l--------~----~~~~~~l 428 (467)
+- + ++ +...++.+++-+++.+.|+ ++. .+. +..+...|-++-. + +- + ..+...+
T Consensus 346 ~~--l----~~--~~l~~~~~~~g~~l~~~l~-~l~~~~~-v~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~ 415 (460)
T PRK06916 346 EL--Y----EK--TNLIEQVARKTEYVATQLE-DLFALKH-VGDIRQLGLMVGIELVKNKETKEPFEWTERVGVQVCKRS 415 (460)
T ss_pred HH--H----Hh--ccHHHHHHHHHHHHHHHHH-HhhcCCC-eEEeecCCceeeEEeecccccccCCCchhhHHHHHHHHH
Confidence 21 1 10 1233444455555555555 431 110 1112233333211 1 10 0 1223444
Q ss_pred HHcccEEEeCCC---eEEec-cCChhhHHHHHHHHHHHHHhc
Q 012238 429 TNKWHVYMTKDG---RISLA-GLSLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 429 l~~~gI~v~~gg---Ris~~-~~~~~~i~~~~~~l~~~l~~~ 466 (467)
++ +||++.+.| |+... .++++++++++++|.++++++
T Consensus 416 ~~-~Gvl~~~~g~~l~~~Ppl~it~~~id~~~~~l~~~l~~~ 456 (460)
T PRK06916 416 RE-LGMLTRPLGNTIVFMPPLASTIDELDEMLRILYKAISDV 456 (460)
T ss_pred HH-CCeEEEecCCEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 54 699999876 55522 348899999999999999764
No 328
>PRK06105 aminotransferase; Provisional
Probab=99.40 E-value=8e-10 Score=113.17 Aligned_cols=341 Identities=11% Similarity=0.039 Sum_probs=183.1
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCC-CCcCC--CCcchHHHHHHHHHHHhCCCCcccccCceeeeecC
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-NKEYL--PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGL 158 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~-~~~Y~--~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ 158 (467)
+.+.||+..|..-..-|. -+|.|.+++.+.++... ...+. ......++-+.+++.... .-+++.+ ++
T Consensus 47 G~~ylD~~~g~~~~~lGh--~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~------~~~~v~f--~~ 116 (460)
T PRK06105 47 GKRYIEGMAGLWSVALGF--SEQRLVEAAARQMKKLPFYHTFSHKSHGPVIDLAEKLVAMAPV------PMSKVFF--TN 116 (460)
T ss_pred CCEEEEcchhHHhccCCC--CCHHHHHHHHHHHHhCCCeecccccCCHHHHHHHHHHHHhCCC------CCCEEEE--eC
Confidence 458999988753122233 36788888888875421 01110 122222344444444211 1257888 99
Q ss_pred CchhHHHHHHHHHHHhC-----CC-CEEEEcCCCCcchHHHH-hhCCC------------CeEEeeeecCCCCC------
Q 012238 159 SGTGSLRLAAALIERYF-----PG-AKVLISSPTWGNHKNIF-NDARV------------PWSEYRYYDPKTVG------ 213 (467)
Q Consensus 159 ggt~al~l~~~~l~~~~-----~g-d~Vlv~~P~y~~~~~~~-~~~G~------------~~~~v~~~~~~~~~------ 213 (467)
+|++|.+.+.++..... +| .+|+...-+|....... ...|. .+..++..+...+.
T Consensus 117 SGseAve~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 196 (460)
T PRK06105 117 SGSEANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHYYRFGLPGESE 196 (460)
T ss_pred CcHHHHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCcccccccCCCCh
Confidence 99999999865543221 23 47888888886543221 11111 11122221000000
Q ss_pred -----CChhhHHHHHHc-CCCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHH
Q 012238 214 -----LDFEGMIADIKA-APGGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSV 286 (467)
Q Consensus 214 -----~d~~~l~~~l~~-~~~~~~~i~i~~p~NPTG~~-~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~ 286 (467)
...+.+++.+.. .+.+...|++-.-+.-.|.. .+++-+++|.++|++||+++|+||++.+|.-.+ ..+..
T Consensus 197 ~~~~~~~~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG---~~f~~ 273 (460)
T PRK06105 197 EAFATRLANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTG---NMFGC 273 (460)
T ss_pred HHHHHHHHHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCc---hhhhH
Confidence 013556676643 22445566665555555665 578889999999999999999999987774211 12222
Q ss_pred HHHHhcCCeEEEEecCccCcccCC-CccceEEEecCCHHHHhhhhhhhHHHHHHHHHhh-------ccCccCCCchHHHH
Q 012238 287 RLFATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRL-------ARPMYSNPPVHGAR 358 (467)
Q Consensus 287 ~~~~~~~~~~i~~~S~SK~~~~~G-~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~~ 358 (467)
....-.++++ .++|.++ .| +.+|.++ .++++.+. +... ....+.+.++++..
T Consensus 274 -~~~~v~PDi~---~~gK~lg-gG~~P~~av~---~~~~i~~~------------~~~~~~~~~~~~h~~T~~gnpl~~a 333 (460)
T PRK06105 274 -ETFGIKPDIL---VMSKQLS-SSYQPLSAVL---MNEKVYDP------------IADESGKIGTFGHGFTASGHPVAAA 333 (460)
T ss_pred -HhcCCCCCee---eeecccc-cCcccceEEE---EcHHHHHH------------HhcccccCcccccCCCCCCCHHHHH
Confidence 1112223433 5789998 56 5788885 67777665 3321 01123345555655
Q ss_pred HHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC-CCCCcccccCCcceE-Eec--C-C-----C------H
Q 012238 359 IVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK-SGKDWSFILRQIGMF-SFT--G-L-----N------K 422 (467)
Q Consensus 359 ~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g-~~~~~~~~~~~~g~f-~~~--~-l-----~------~ 422 (467)
++...|+- + ++ +...++.+++-++|.+.|+ ++. .|. +..+...|.++ +.+ + . + .
T Consensus 334 aa~a~L~~--i----~~--~~l~~~v~~~g~~l~~~L~-~l~~~~~-v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~a~ 403 (460)
T PRK06105 334 VALENLAI--I----EE--RDLVGNAAERGARLQARLR-ALADHPL-VGEVRGVGLIAAVELVADKATKTPFEPPGKVGA 403 (460)
T ss_pred HHHHHHHH--H----Hh--ccHHHHHHHHHHHHHHHHH-HhhcCCC-eEEEEecceEEEEEEecCcccCCCCCchhHHHH
Confidence 55555431 1 10 1234444455555555555 331 110 11222333322 111 1 0 0 1
Q ss_pred HHHHHHHHcccEEEeCCC---eEEecc-CChhhHHHHHHHHHHHHHhc
Q 012238 423 AQSDNMTNKWHVYMTKDG---RISLAG-LSLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 423 ~~~~~ll~~~gI~v~~gg---Ris~~~-~~~~~i~~~~~~l~~~l~~~ 466 (467)
.+...++ ++||++.+.| ||+... +++++++++++++.++++++
T Consensus 404 ~i~~~~~-~~Gvl~~~~g~~i~l~Ppl~it~~eid~~~~~l~~~l~~~ 450 (460)
T PRK06105 404 RANAAAH-EHGVISRAMGDTLAFCPPLIITAAQVDEMVDRFGRALDDV 450 (460)
T ss_pred HHHHHHH-HCCeEEEecCCEEEEECCCccCHHHHHHHHHHHHHHHHHH
Confidence 2233444 5699998876 666442 48899999999999998764
No 329
>PRK06917 hypothetical protein; Provisional
Probab=99.40 E-value=6.9e-10 Score=113.21 Aligned_cols=338 Identities=11% Similarity=0.012 Sum_probs=179.9
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCC---CCcchHHHHHHHHHHHhCCCCcccccCceeeeecC
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYL---PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGL 158 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~---~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ 158 (467)
+.+.||+..|..-..-|. -.|.|.+++.+.++... +.+. ......+|-+.+++.+-.. .+.+.+ ++
T Consensus 30 G~~ylD~~~g~~~~~lGh--~hp~v~~Ai~~ql~~~~-~~~~~~~~~~~~~~lae~L~~~~p~~------~~~v~f--~~ 98 (447)
T PRK06917 30 GNKYFDGSSGAVTAGIGH--GVKEIADAIKEQAEEVS-FVYRSQFTSEPAEKLAKKLSDLSPGD------LNWSFF--VN 98 (447)
T ss_pred CCEEEECchhHHhccCCC--CCHHHHHHHHHHHhhCc-CccccccCCHHHHHHHHHHHHhCCCC------CCEEEE--eC
Confidence 357899987743111232 36788888888776421 2211 2222334444444442111 247888 99
Q ss_pred CchhHHHHHHHHHHHh-----CCC-CEEEEcCCCCcchHHHH-hhCCC------------CeEEeeeecCCCC--C----
Q 012238 159 SGTGSLRLAAALIERY-----FPG-AKVLISSPTWGNHKNIF-NDARV------------PWSEYRYYDPKTV--G---- 213 (467)
Q Consensus 159 ggt~al~l~~~~l~~~-----~~g-d~Vlv~~P~y~~~~~~~-~~~G~------------~~~~v~~~~~~~~--~---- 213 (467)
+|++|.+.+.++.... .+| .+|+...-+|....... ...|. .+..++....... .
T Consensus 99 sGsEAve~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 178 (447)
T PRK06917 99 SGSEANETAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYP 178 (447)
T ss_pred ChHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcccccccCCChH
Confidence 9999999985554322 133 58999898887654322 22221 1111221000000 0
Q ss_pred ----CChhhHHHHHHcCC-CCcEEEEeCCCCC-CCCC-CCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHH
Q 012238 214 ----LDFEGMIADIKAAP-GGSFILLHGCAHN-PTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSV 286 (467)
Q Consensus 214 ----~d~~~l~~~l~~~~-~~~~~i~i~~p~N-PTG~-~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~ 286 (467)
-+.+.+++.++... +....+++-..+. --|. ..+.+-+++|.++|++||+++|.||+..+|.-.+ ..+..
T Consensus 179 ~~~~~~~~~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRtG---~~~a~ 255 (447)
T PRK06917 179 TCQLACATELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRTG---AMFAM 255 (447)
T ss_pred HHHHHHHHHHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCccc---chhhH
Confidence 12356677776432 2344555443332 3344 5578889999999999999999999987763211 11111
Q ss_pred HHHHhcCCeEEEEecCccCcccCCC-ccceEEEecCCHHHHhhhhhhhHHHHHHHHHhh----ccCccCCCchHHHHHHH
Q 012238 287 RLFATRGMELLVAQSYSKNLGLYAE-RIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRL----ARPMYSNPPVHGARIVA 361 (467)
Q Consensus 287 ~~~~~~~~~~i~~~S~SK~~~~~G~-RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~~ 361 (467)
....-.++++ .++|.++ .|. .+|.++ ..+++.+. +... ....+.+.+.++..++.
T Consensus 256 -~~~gv~PDi~---~~gK~l~-~G~~Pi~a~~---~~~~i~~~------------~~~~~~~~~~~~T~~gnpl~~aaa~ 315 (447)
T PRK06917 256 -EHWGVEPDIM---TLGKGLG-AGYTPIAATV---VSDRVMEP------------ILRGSRSIMSGHTLSANPLSAATAL 315 (447)
T ss_pred -HhcCCCCCEE---Eeeehhc-cCCcceEEEE---EcHHHHHH------------HhccCcccccccCCCCCHHHHHHHH
Confidence 1112223433 5689998 675 788885 67777665 3211 11123344555555555
Q ss_pred HHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhc----cCCCCCcccccCCcceEE-ec--C------C------CH
Q 012238 362 NVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAK----DKSGKDWSFILRQIGMFS-FT--G------L------NK 422 (467)
Q Consensus 362 ~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~----~g~~~~~~~~~~~~g~f~-~~--~------l------~~ 422 (467)
+.|+- + ++ +...++.+++-++|.+.|+ + .+. ...+...|.++. .+ + . ..
T Consensus 316 a~l~~--l----~~--~~l~~~~~~~g~~l~~~L~-~l~~~~~~---i~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~ 383 (447)
T PRK06917 316 AVLEY--M----EK--HNLPEKAAEKGEYLIKGLQ-KVQQQSTI---IGDVRGKGLLIGVEFVADKKTKQPFSKSQAVAS 383 (447)
T ss_pred HHHHH--H----HH--CCHHHHHHHHHHHHHHHHH-HHHhcCCC---EEEEeecceEEEEEEeccCCcCCCCcchhHHHH
Confidence 55431 1 00 1233444444444454544 3 222 112233333331 11 1 0 11
Q ss_pred HHHHHHHHcccEEEeCC--------C---eEEec-cCChhhHHHHHHHHHHHHHhc
Q 012238 423 AQSDNMTNKWHVYMTKD--------G---RISLA-GLSLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 423 ~~~~~ll~~~gI~v~~g--------g---Ris~~-~~~~~~i~~~~~~l~~~l~~~ 466 (467)
.+...+++ +||++.+. | ||+.. .++++++++++++|.++++++
T Consensus 384 ~~~~~~~~-~Gvl~~~~~~~~~g~~~~~i~l~Ppl~it~~eid~~~~~l~~~l~~~ 438 (447)
T PRK06917 384 ELISVAAK-NGLLLYPAVAGQDGKEGDAVIIAPPMTITYSELDELLSIFAKSVEEM 438 (447)
T ss_pred HHHHHHHh-CCcEEEecccccCCCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHHH
Confidence 23445555 69999764 2 66644 238899999999999998754
No 330
>PRK07036 hypothetical protein; Provisional
Probab=99.40 E-value=1.1e-09 Score=112.39 Aligned_cols=343 Identities=10% Similarity=0.072 Sum_probs=181.0
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCC-CCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCc
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 160 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~-~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~gg 160 (467)
+.+.||+..|..-..-|. -.|.|.+++.+.+.... ...+. ....+.+..+|+.+...... .-+++.+ +++|
T Consensus 50 G~~ylD~~~g~~~~~lGh--~~p~v~~Ai~~q~~~~~~~~~~~--~~~~~~~~~lae~L~~~~p~--~~~~v~f--~~sG 121 (466)
T PRK07036 50 GRRYLDGIGGMWCVNVGY--GREEMADAIADQARRLPYYTPFG--DMTNAPAAELAAKLAELAPG--DLNHVFL--TTGG 121 (466)
T ss_pred CCEEEECcccHHhhcCCC--CCHHHHHHHHHHHHhCccccccc--ccCCHHHHHHHHHHHHhCCC--CcCEEEE--eCCc
Confidence 457899987743111222 36778888888775421 11111 01112334444444332110 1247888 9999
Q ss_pred hhHHHHHHHHHHHhC-----C-CCEEEEcCCCCcchHHHHhh-CCC------------CeEEeeeecC--CCCCCC----
Q 012238 161 TGSLRLAAALIERYF-----P-GAKVLISSPTWGNHKNIFND-ARV------------PWSEYRYYDP--KTVGLD---- 215 (467)
Q Consensus 161 t~al~l~~~~l~~~~-----~-gd~Vlv~~P~y~~~~~~~~~-~G~------------~~~~v~~~~~--~~~~~d---- 215 (467)
++|.+.+.++..... + ..+|+...-+|......+.. .|. .+..++..+. ...+.+
T Consensus 122 seAve~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 201 (466)
T PRK07036 122 STAVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEAAF 201 (466)
T ss_pred hHHHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCcccccccCCChHHH
Confidence 999999866543331 2 25788888888765432221 111 1222222110 001111
Q ss_pred ----hhhHHHHHHc-CCCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHH
Q 012238 216 ----FEGMIADIKA-APGGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF 289 (467)
Q Consensus 216 ----~~~l~~~l~~-~~~~~~~i~i~~p~NPTG~~-~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~ 289 (467)
.+.+++.+.. .++....+++-..+.-.|.. ++.+.+++|.++|++||+++|+||+..+|.-.+ ..+.....
T Consensus 202 ~~~~~~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG---~~~~~~~~ 278 (466)
T PRK07036 202 CDFLVDEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLG---HFFASEAV 278 (466)
T ss_pred HHHHHHHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCc---hhhhhhhh
Confidence 2334455543 23455566666555555664 567889999999999999999999987773211 11121111
Q ss_pred HhcCCeEEEEecCccCcccCC-CccceEEEecCCHHHHhhhhhhhHHHHHHHHHh-------hccCccCCCchHHHHHHH
Q 012238 290 ATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKR-------LARPMYSNPPVHGARIVA 361 (467)
Q Consensus 290 ~~~~~~~i~~~S~SK~~~~~G-~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~~~~ 361 (467)
..-.++++ .++|.++ .| +.+|.++ ..+++.+. +.. .....+.+.++++..++.
T Consensus 279 ~gv~PDiv---t~gK~l~-gG~~Pi~av~---~~~~i~~~------------~~~~~~~~~~~~~~~T~~gnpl~~aaa~ 339 (466)
T PRK07036 279 FGIQPDII---TFAKGLT-SGYQPLGAVI---ISERLLDV------------ISGPNAKGNVFTHGFTYSGHPVACAAAL 339 (466)
T ss_pred cCCCCCEE---EEccccc-cCccccEEEE---EcHHHHHH------------HhcccCcCcccccCCCCCCCHHHHHHHH
Confidence 12223433 4589998 67 4889885 67777765 321 111112234555555555
Q ss_pred HHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC-CCCCcccccCCcceEEecCC------------C----HHH
Q 012238 362 NVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK-SGKDWSFILRQIGMFSFTGL------------N----KAQ 424 (467)
Q Consensus 362 ~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g-~~~~~~~~~~~~g~f~~~~l------------~----~~~ 424 (467)
..|+. + ++ +...++.+++-++|.+.|+ ++. .|. ...+...|.++ -+.+ + ..+
T Consensus 340 a~Le~--i----~~--~~l~~~~~~~g~~l~~~L~-~l~~~~~-v~~vrG~Gl~~-~ve~~~~~~~~~~~~~~~~~~~~~ 408 (466)
T PRK07036 340 KNIEI--M----ER--EGLCEHVREVGPYFEERLA-SLRELPL-VGDVRGDHLMA-CVECVADKGSKALLPEDIAIGQRI 408 (466)
T ss_pred HHHHH--H----Hh--CCHHHHHHHHHHHHHHHHH-HhccCCC-EEEEEeeceEE-EEEEccCccccCCCCchhHHHHHH
Confidence 55431 1 00 1233444444444555554 321 110 11223333332 2211 0 123
Q ss_pred HHHHHHcccEEEeCCC---eEEec-cCChhhHHHHHHHHHHHHHhc
Q 012238 425 SDNMTNKWHVYMTKDG---RISLA-GLSLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 425 ~~~ll~~~gI~v~~gg---Ris~~-~~~~~~i~~~~~~l~~~l~~~ 466 (467)
...+++ +||++.+.| ||+.. .+++++++++++++.++++++
T Consensus 409 ~~~~~~-~Gvl~~~~~~~~~l~Ppl~it~~~id~~~~~l~~al~~~ 453 (466)
T PRK07036 409 DRHCQE-RGLLVRPLEHLCVLSPPLIITRAQIDEIVAILRAAIEET 453 (466)
T ss_pred HHHHHH-CCcEEeecCCEEEEeCCCcCCHHHHHHHHHHHHHHHHHH
Confidence 445554 699998865 56533 248899999999999888653
No 331
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.39 E-value=9.9e-10 Score=111.22 Aligned_cols=334 Identities=10% Similarity=0.036 Sum_probs=177.6
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcC--CCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCC
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEY--LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 159 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y--~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g 159 (467)
+.+.||+..|..-..-+. -.|.+.+++.+.++......+ .......+|-+.+++.... .-+++.+ +++
T Consensus 39 G~~ylD~~~g~~~~~lGh--~~p~i~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~------~~~~v~f--~~S 108 (422)
T PRK05630 39 GSTVIDAMSSWWSAAHGH--GHPRLKAAAHKQIDTMSHVMFGGLTHEPAIKLTRKLLNLTDN------GLDHVFY--SDS 108 (422)
T ss_pred CCEEEEcchhHHHhcCCC--CCHHHHHHHHHHHHhCCCcccCCcCCHHHHHHHHHHHhhCCC------CcCEEEE--eCC
Confidence 458899988754222232 367888888887754221111 1222233444445444211 0257888 999
Q ss_pred chhHHHHHHHHHHHhC-----CC-CEEEEcCCCCcchHHHH-hhCCC-------------CeEEeeeecCCCCCCCh---
Q 012238 160 GTGSLRLAAALIERYF-----PG-AKVLISSPTWGNHKNIF-NDARV-------------PWSEYRYYDPKTVGLDF--- 216 (467)
Q Consensus 160 gt~al~l~~~~l~~~~-----~g-d~Vlv~~P~y~~~~~~~-~~~G~-------------~~~~v~~~~~~~~~~d~--- 216 (467)
|++|.+.+.++..... ++ .+|+....+|....... ...+- .+..+|... ....+.
T Consensus 109 GseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~--~~~~~~~~~ 186 (422)
T PRK05630 109 GSVSVEVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPP--VRGSSPQEI 186 (422)
T ss_pred cHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCCc--ccCCChHHH
Confidence 9999999866544432 23 47999998887643222 11111 112222210 011121
Q ss_pred ----hhHHHHHHcCCCCcEEEEeCC-CCCCCCCC-CCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHH
Q 012238 217 ----EGMIADIKAAPGGSFILLHGC-AHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFA 290 (467)
Q Consensus 217 ----~~l~~~l~~~~~~~~~i~i~~-p~NPTG~~-~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~ 290 (467)
+.+++.+. .+...+++.. .+.-.|.. ++.+-+++|.++|++||+++|+||+..++.-.+ ..+.. ...
T Consensus 187 ~~~~~~~~~~~~---~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG---~~~a~-~~~ 259 (422)
T PRK05630 187 SEYLRSLELLID---ETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTG---ELFAT-LAA 259 (422)
T ss_pred HHHHHHHHHHHh---hceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCc---hhhHH-Hhc
Confidence 23334343 3455555554 26666774 567889999999999999999999987774221 12221 111
Q ss_pred hcCCeEEEEecCccCcccCC-CccceEEEecCCHHHHhhhhhhhHHHHHHHHHhh------ccCccCCCchHHHHHHHHH
Q 012238 291 TRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRL------ARPMYSNPPVHGARIVANV 363 (467)
Q Consensus 291 ~~~~~~i~~~S~SK~~~~~G-~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~~~~~~~ 363 (467)
.-.++++ .++|.++ .| ..+|+++ .++++.+. +... ....+.+.+.++..++...
T Consensus 260 gv~PDi~---t~gK~l~-gG~~p~~av~---~~~~i~~~------------~~~~~~~~~~~h~~T~~g~Pla~aaa~aa 320 (422)
T PRK05630 260 GVTPDIM---CVGKALT-GGFMSFAATL---CTDKVAQL------------ISTPNGGGALMHGPTFMANPLACAVAHAS 320 (422)
T ss_pred CCCCCee---eeechhh-cCccccceee---ccHHHHHH------------HhccCCCCccccCCCCcCCHHHHHHHHHH
Confidence 2223433 6799886 56 4678884 77777665 3211 1111223444454555444
Q ss_pred hCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC-CCCCcccccCCcceEEecCC----CHHH-HHHHHHcccEEEe
Q 012238 364 VGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK-SGKDWSFILRQIGMFSFTGL----NKAQ-SDNMTNKWHVYMT 437 (467)
Q Consensus 364 L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g-~~~~~~~~~~~~g~f~~~~l----~~~~-~~~ll~~~gI~v~ 437 (467)
|+- + ++ +...++++++-+++.+.|+ .+. .|. +..+...|. ++-+.+ .... .+.++ ++||++.
T Consensus 321 L~~--l----~~--~~~~~~~~~~g~~l~~~L~-~l~~~~~-v~~vRg~Gl-~~~ie~~~~~~~~~~~~~~~-~~Gl~~~ 388 (422)
T PRK05630 321 LEI--I----ET--GMWRKQVKRIEAELIAGLS-PLAHLPG-VADVRVLGA-IGVVEMEQPVDMEEATQAAV-DHGVWLR 388 (422)
T ss_pred HHH--H----Hh--CcHHHHHHHHHHHHHHHHH-HhhcCCC-eeeeecccc-EEEEEECCcccHHHHHHHHH-HCCeEEE
Confidence 421 1 00 0122344444444444444 321 110 111222333 322211 2333 44555 4699998
Q ss_pred CCC---eEEec-cCChhhHHHHHHHHHHHHHh
Q 012238 438 KDG---RISLA-GLSLAKCEYLADAIIDSYHN 465 (467)
Q Consensus 438 ~gg---Ris~~-~~~~~~i~~~~~~l~~~l~~ 465 (467)
+.| ||... .++++++++++++|.++++.
T Consensus 389 ~~g~~l~~~PpL~it~~~i~~~~~~l~~al~~ 420 (422)
T PRK05630 389 PFGRLVYVMPPYITTSEQIAQICAALAAAVKA 420 (422)
T ss_pred ecCCEEEEECCccCCHHHHHHHHHHHHHHHhc
Confidence 876 65543 24889999999999999864
No 332
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.39 E-value=9e-11 Score=123.18 Aligned_cols=178 Identities=13% Similarity=0.039 Sum_probs=115.8
Q ss_pred CCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHH-HHhhCCCCeE
Q 012238 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKN-IFNDARVPWS 202 (467)
Q Consensus 124 ~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~-~~~~~G~~~~ 202 (467)
|..-+.+..+.+|+.++.+ .-.++ ++|+|.++..+ +++.+.+||+|++...|+-.... .+...|+.++
T Consensus 172 ~eG~i~eAq~~AA~~fgAd-------~tyFl--vNGTS~gn~a~--i~a~~~~Gd~VLvdRN~HKSv~hgaLiLsGa~PV 240 (720)
T PRK13578 172 HEGAAKDAQKHAAKVFNAD-------KTYFV--LNGTSASNKVV--TNALLTPGDLVLFDRNNHKSNHHGALIQAGATPV 240 (720)
T ss_pred CChHHHHHHHHHHHHhCCC-------ceEEE--eCChhHHHHHH--HHHhcCCCCEEEeecccHHHHHHHHHHHcCCeEE
Confidence 3434566666666664332 23445 79999999987 67788899999999999988777 4889999999
Q ss_pred EeeeecCC---CCCCChhh-----HHHHHHcCC-C------CcEEEEeCCCCCCCCCCCCHHHHHHHHHH-HHhcCCeeE
Q 012238 203 EYRYYDPK---TVGLDFEG-----MIADIKAAP-G------GSFILLHGCAHNPTGIDPTPEQWEKIADV-IQEKNHIPF 266 (467)
Q Consensus 203 ~v~~~~~~---~~~~d~~~-----l~~~l~~~~-~------~~~~i~i~~p~NPTG~~~~~~~l~~l~~~-~~~~~~~li 266 (467)
++...-.. -++++.+. +++++++.+ . ..+++++++|+ --|++++.+ +|++. ++.++ .|+
T Consensus 241 Yl~P~~n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pT-YdG~~ydi~---~I~~~~~h~~~-~ll 315 (720)
T PRK13578 241 YLETARNPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGT-YDGTIYNAR---QVVDKIGHLCD-YIL 315 (720)
T ss_pred EeeccccccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCC-CcceeecHH---HHHHHhhccCC-cEE
Confidence 98542211 12456555 888887652 2 14666665432 239998876 55555 56677 999
Q ss_pred EeccCCCC-CCCCCCCChhHHH-HHHhcCCeEEEEecCccCcccCCCccceEEEe
Q 012238 267 FDVAYQGF-ASGSLDNDASSVR-LFATRGMELLVAQSYSKNLGLYAERIGAMNVV 319 (467)
Q Consensus 267 ~Deay~~~-~~~~~~~~~~~~~-~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v 319 (467)
+||||... .|.+.-.+.+... ..-..+..++++.|.+|.+ +++.-+.++++
T Consensus 316 vDEAhgah~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL--~alTQaS~LHv 368 (720)
T PRK13578 316 FDSAWVGYEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQ--AGFSQTSQIHK 368 (720)
T ss_pred EeCcchhhhccCcccccCChhhhhcCCCCCCeEEEEChhhcc--hhhhhHhhhhc
Confidence 99998644 3432101111111 1111234679999999997 56777777654
No 333
>PLN02880 tyrosine decarboxylase
Probab=99.39 E-value=1.2e-09 Score=112.41 Aligned_cols=330 Identities=9% Similarity=0.037 Sum_probs=191.3
Q ss_pred hHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccc-----cCceeeeecCCchhHHHHHHHHHHH--hC
Q 012238 103 LDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLK-----EQRVATVQGLSGTGSLRLAAALIER--YF 175 (467)
Q Consensus 103 ~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~-----~~~i~~~~t~ggt~al~l~~~~l~~--~~ 175 (467)
+..+-+.+...++.. ...|...++..++.+.+.+|+....|.+-. ...-++ |.|||+|...+...... +.
T Consensus 96 ~~~lad~l~~~~n~~-~~~~~~sp~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~--tsggs~anl~al~~AR~~~~~ 172 (490)
T PLN02880 96 AGFLGEMLSAGLNIV-GFSWITSPAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVI--QGTASEAVLVVLLAARDRVLR 172 (490)
T ss_pred HHHHHHHHHHhhccC-CcccccCcccHHHHHHHHHHHHHHhCCCchhhcCCCCceEE--cCccHHHHHHHHHHHHHHHHH
Confidence 344444445544432 234444456667777777777665554311 012345 79999998776322111 10
Q ss_pred -------CCCEEEEcCCCCcchHHHHhhCCCC---eEEeeeecCCCCCCChhhHHHHHHcC---CCCcEEEEeCCCCCCC
Q 012238 176 -------PGAKVLISSPTWGNHKNIFNDARVP---WSEYRYYDPKTVGLDFEGMIADIKAA---PGGSFILLHGCAHNPT 242 (467)
Q Consensus 176 -------~gd~Vlv~~P~y~~~~~~~~~~G~~---~~~v~~~~~~~~~~d~~~l~~~l~~~---~~~~~~i~i~~p~NPT 242 (467)
+.-.|++++-++.....+++.+|+. ++.||+++.+++.+|++.|++.+++. ...+.+|+-+.+...|
T Consensus 173 ~~g~~~~~~~vv~~S~~aH~Sv~Kaa~~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~ 252 (490)
T PLN02880 173 KVGKNALEKLVVYASDQTHSALQKACQIAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSS 252 (490)
T ss_pred HhcccccCCeEEEEcCCchHHHHHHHHHcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcC
Confidence 1125667778888899999999995 78888854456789999999999752 2346777778889999
Q ss_pred CCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhc-CCeEEEEecCccCcccCCCccceEEEecC
Q 012238 243 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR-GMELLVAQSYSKNLGLYAERIGAMNVVCS 321 (467)
Q Consensus 243 G~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~S~SK~~~~~G~RiG~~~~v~~ 321 (467)
|.+-+.+ +|+++|++||+|+.+|.+|.++..-. ...+..... ..-.-+..+++|.+..| .-.|.+. +.
T Consensus 253 GaiDpl~---eI~~i~~~~~iwlHVDaA~gg~~~~~-----~~~~~~l~gie~aDSit~d~HKwl~~P-~~~g~ll--vr 321 (490)
T PLN02880 253 TAVDPLL---ELGKIAKSNGMWFHVDAAYAGSACIC-----PEYRHYIDGVEEADSFNMNAHKWFLTN-FDCSLLW--VK 321 (490)
T ss_pred cccCcHH---HHHHHHHHcCCEEEEehhhHHHHHhC-----HHHHHHhcCchhcCEEEECchhhcCCC-ccEEEEE--Ee
Confidence 9977765 66777999999999999998775321 112222221 12346678899988644 6677775 34
Q ss_pred CHHH-HhhhhhhhHHHHHHH---HHhhccC-------c-cC-----CCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q 012238 322 SSDL-AARCCEVAVIQVKSQ---LKRLARP-------M-YS-----NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRI 384 (467)
Q Consensus 322 ~~~~-~~~~~~~~~~~~~~~---l~~~~~~-------~-~~-----~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~ 384 (467)
+... ... +... +...... . +. ....+...+....+. .+.++++.++.
T Consensus 322 ~~~~l~~~--------~~~~~~Yl~~~~~~~~~~~~~~~~~i~~~rr~~alklw~~l~~~G--------~~g~~~~i~~~ 385 (490)
T PLN02880 322 DRNALIQS--------LSTNPEFLKNKASQANSVVDYKDWQIPLGRRFRSLKLWMVLRLYG--------VENLQSYIRNH 385 (490)
T ss_pred CHHHHHHH--------HccCHHHhcCccccccCCCChhccCcCCCCcccHHHHHHHHHHhC--------HHHHHHHHHHH
Confidence 4332 222 1000 0000000 0 00 000111111111111 23345555555
Q ss_pred HHHHHHHHHHhhhccCCCCCcccccC-CcceEEec--C--CC--------HHHHHHHHHcccEEEeCC---C----eEEe
Q 012238 385 KNVRQKLFDSLSAKDKSGKDWSFILR-QIGMFSFT--G--LN--------KAQSDNMTNKWHVYMTKD---G----RISL 444 (467)
Q Consensus 385 ~~~r~~l~~~l~~~~g~~~~~~~~~~-~~g~f~~~--~--l~--------~~~~~~ll~~~gI~v~~g---g----Ris~ 444 (467)
-+..+++.+.++ +.. .++...+ ..+..+|- + .+ .+..+++.++..+++... | |+++
T Consensus 386 ~~lA~~~~~~l~-~~~---~~el~~~~~~~iv~Fr~~~~~~~~~~~~~~n~~l~~~l~~~g~~~v~~t~~~g~~~lR~~~ 461 (490)
T PLN02880 386 IKLAKEFEQLVA-QDS---RFEVVTPRIFSLVCFRLVPPKNNEDNGNKLNHDLLDAVNSSGKIFISHTVLSGKYVLRFAV 461 (490)
T ss_pred HHHHHHHHHHHh-cCC---CEEEecCCceEEEEEEEeCCCCChhhHHHHHHHHHHHHHhCCCEEEEEEEECCEEEEEEEe
Confidence 577888888887 542 1454443 44444332 1 11 233456666667776653 3 9987
Q ss_pred ccC--ChhhHHHHHHHHHHHHHhc
Q 012238 445 AGL--SLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 445 ~~~--~~~~i~~~~~~l~~~l~~~ 466 (467)
... ++++++.+++.|.++.+++
T Consensus 462 ~n~~tt~~di~~~~~~i~~~~~~~ 485 (490)
T PLN02880 462 GAPLTEERHVTAAWKVLQDEASKL 485 (490)
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHH
Confidence 654 4589999999998887653
No 334
>PRK12403 putative aminotransferase; Provisional
Probab=99.38 E-value=1.5e-09 Score=111.15 Aligned_cols=344 Identities=13% Similarity=0.019 Sum_probs=175.6
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCC-CcC--CCCcchHHHHHHHHHHHhCCCCcccccCceeeeecC
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGEN-KEY--LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGL 158 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~-~~Y--~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ 158 (467)
+.+.||+..|..-..-|. -.|.|.+++.+.++.... ..+ .+.....+|-+.+++++... -+.+++ ++
T Consensus 53 G~~ylD~~~g~~~~~lGh--~hp~v~~A~~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~------~~~v~f--~~ 122 (460)
T PRK12403 53 GKRYLDGMSGLWCTNLGY--GRKDLAAAAARQMEQLPYYNMFFHTTHPAVIELSELLFSLLPGH------YSHAIY--TN 122 (460)
T ss_pred CCEEEECchhHHhhcCCC--CCHHHHHHHHHHHHhCCCeecccccCCHHHHHHHHHHHHhCCCC------cCEEEE--eC
Confidence 457899887753222233 367888888888754211 111 12222344555555553211 257888 99
Q ss_pred CchhHHHHHHHHHHHh-----CCCC-EEEEcCCCCcchHH-HHhhCCCC-----------eEEeeeecC--CCCCC----
Q 012238 159 SGTGSLRLAAALIERY-----FPGA-KVLISSPTWGNHKN-IFNDARVP-----------WSEYRYYDP--KTVGL---- 214 (467)
Q Consensus 159 ggt~al~l~~~~l~~~-----~~gd-~Vlv~~P~y~~~~~-~~~~~G~~-----------~~~v~~~~~--~~~~~---- 214 (467)
+|++|.+.+.++...+ .+++ .|+...-+|..... .+...|.+ +..+|.... ..+..
T Consensus 123 SGseA~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 202 (460)
T PRK12403 123 SGSEANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAE 202 (460)
T ss_pred CcHHHHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEeCCCcccccccCCChHH
Confidence 9999999986665443 1333 34455667755422 22222211 222221000 00011
Q ss_pred ----ChhhHHHHHHc-CCCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHH
Q 012238 215 ----DFEGMIADIKA-APGGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRL 288 (467)
Q Consensus 215 ----d~~~l~~~l~~-~~~~~~~i~i~~p~NPTG~~-~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~ 288 (467)
+.+.+++.+.+ .++....+++-.-+.-.|.+ .+.+-+++|.++|++||+++|.||+..+|.-.+ ..+.. .
T Consensus 203 ~~~~~~~~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG---~~~a~-e 278 (460)
T PRK12403 203 FGRRAALQLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTG---EWFAH-E 278 (460)
T ss_pred HHHHHHHHHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCc---hhhhh-h
Confidence 12445555532 22445556655555555664 467889999999999999999999987774221 11111 1
Q ss_pred HHhcCCeEEEEecCccCcccCCC-ccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCCh
Q 012238 289 FATRGMELLVAQSYSKNLGLYAE-RIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNP 367 (467)
Q Consensus 289 ~~~~~~~~i~~~S~SK~~~~~G~-RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~ 367 (467)
...-.+++++ ++|.++ .|. .+|.++ ..+++.+. +...-.......+.+.++++..++.+.|+-
T Consensus 279 ~~gv~PDiv~---~gK~lg-gG~~Piga~v---~~~~i~~~--------~~~~~~~~~~~~T~~gnPl~~Aaala~L~~- 342 (460)
T PRK12403 279 HFGFEPDTLS---IAKGLT-SGYVPMGGLV---LSKRIAEA--------LVEQGGVFAHGLTYSGHPVAAAVAIANLKA- 342 (460)
T ss_pred hcCCCCCeEE---Eccccc-ccccceEEEE---ECHHHHHH--------HhcCCCccccCCCCCCCHHHHHHHHHHHHH-
Confidence 1122234443 799998 674 788885 56666665 211000011112323455555555555431
Q ss_pred hhHHHHHHHHHHHHHHHH-HHHHHHHHHhhh---ccCCCCCcccccCCcceEE--ecC-------CCH--H----HHHHH
Q 012238 368 ALFDEWKAEMEMMAGRIK-NVRQKLFDSLSA---KDKSGKDWSFILRQIGMFS--FTG-------LNK--A----QSDNM 428 (467)
Q Consensus 368 ~~~~~~~~~l~~~~~~~~-~~r~~l~~~l~~---~~g~~~~~~~~~~~~g~f~--~~~-------l~~--~----~~~~l 428 (467)
+.+ + ...++.+ ++-+++.+.|++ +.+. +..+...|.++. +.. ... . ....+
T Consensus 343 -i~~---~---~l~~~~~~~~g~~l~~~L~~l~~~~~~---i~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (460)
T PRK12403 343 -LRD---E---GVVTRVKDDTGPYLQRCLREVFGDHPL---VGEVQGAGLVAALQFAEDKATRKRFANENDLAWRCRTIG 412 (460)
T ss_pred -HHh---c---cHHHHHHHHHHHHHHHHHHHHHhcCCC---EEeEeecceEEEEEEccCccccccccchhHHHHHHHHHH
Confidence 110 0 1222232 233333333330 3332 112233333321 111 011 1 12233
Q ss_pred HHcccEEEeCCC---eEEecc-CChhhHHHHHHHHHHHHHhc
Q 012238 429 TNKWHVYMTKDG---RISLAG-LSLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 429 l~~~gI~v~~gg---Ris~~~-~~~~~i~~~~~~l~~~l~~~ 466 (467)
++ +||++.+.| |++... +++++++++++++.+++.++
T Consensus 413 ~~-~Gll~~~~~~~~~l~Ppl~it~~eid~~~~~l~~al~~~ 453 (460)
T PRK12403 413 FE-EGVIIRSTLGRMIMAPALVAGRAEIDELVDKTRIAVDRT 453 (460)
T ss_pred Hh-CCEEEEecCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 44 699998754 555432 38899999999999998764
No 335
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.38 E-value=5.3e-10 Score=113.75 Aligned_cols=328 Identities=14% Similarity=0.116 Sum_probs=170.2
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCch
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (467)
+...||+..|.--..-|. -.|.|.+++.+.++...... .+.....++-+.+++.... .+.+.+ +++|+
T Consensus 47 G~~ylD~~~g~~~~~lGh--~~p~v~~Ai~~q~~~~~~~~-~~~~~~~~la~~l~~~~p~-------~~~v~f--~~sGs 114 (431)
T PRK06209 47 GNEYIEYGMGLRAVGLGH--AYPPVVEAVREALQDGCNFT-RPSAIELDAAESFLELIDG-------ADMVKF--CKNGS 114 (431)
T ss_pred CCEEEEccccccchhcCC--CCHHHHHHHHHHHHhCcCCC-CCCHHHHHHHHHHHHhCCc-------cceEEE--ecCHH
Confidence 457899987753222233 36788888888876543211 1222222445555555311 247888 99999
Q ss_pred hHHHHHHHHHHHhCCCC-EEEEc-CCCCcchHHHH-----hhCCCC--e--EEeeeecCCCCCCChhhHHHHHHcCCCCc
Q 012238 162 GSLRLAAALIERYFPGA-KVLIS-SPTWGNHKNIF-----NDARVP--W--SEYRYYDPKTVGLDFEGMIADIKAAPGGS 230 (467)
Q Consensus 162 ~al~l~~~~l~~~~~gd-~Vlv~-~P~y~~~~~~~-----~~~G~~--~--~~v~~~~~~~~~~d~~~l~~~l~~~~~~~ 230 (467)
+|.+.+.++.... .|. +|+.. .-+|..+.... ...|.. . ..+.+ + -.|++.+++.+++.+.+.
T Consensus 115 eA~e~AlklAr~~-tgr~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~~~--~---~~d~~~l~~~l~~~~~~~ 188 (431)
T PRK06209 115 DATSAAVRLARAY-TGRDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTVTF--R---YNDIASLEALFEDHPGRI 188 (431)
T ss_pred HHHHHHHHHHHHH-hCCCeEEEeccCccccccccccccCCCCCCCChhHhcccccc--C---CCCHHHHHHHHHhCCCCE
Confidence 9999986654333 344 55544 22332111000 000110 0 00111 0 137899999887543344
Q ss_pred EEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCC
Q 012238 231 FILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYA 310 (467)
Q Consensus 231 ~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G 310 (467)
.++++-. -.|...+.+.+++|.++|++||+++|+||+..++.... ..........++ +..++|.+| .|
T Consensus 189 aavi~Ep---v~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~tG~~~~~-----~g~~~~~gv~PD---i~t~gK~lg-gG 256 (431)
T PRK06209 189 ACVILEP---ATADEPQDGFLHEVRRLCHENGALFILDEMITGFRWHM-----RGAQKLYGIVPD---LSCFGKALG-NG 256 (431)
T ss_pred EEEEEcc---ccCCCCCHHHHHHHHHHHHHcCCEEEEEcccccCCcCc-----chhhHHhCCCcc---eeeehhhhc-CC
Confidence 4555432 23557788999999999999999999999977664321 111111122223 256799998 68
Q ss_pred CccceEEEecCCHHHHhhhhhhhHHHHHHHHHhh--cc----CccCCCchHHHHHHHHHhC---ChhhHHHHHHHHHHHH
Q 012238 311 ERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRL--AR----PMYSNPPVHGARIVANVVG---NPALFDEWKAEMEMMA 381 (467)
Q Consensus 311 ~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~--~~----~~~~~~~~~~~~~~~~~L~---~~~~~~~~~~~l~~~~ 381 (467)
+.+|+++ .++++++. +. +... .+ ..+.+++.+...++...|+ +..+ +++..
T Consensus 257 ~p~~av~---~~~~i~~~--------~~--~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~i~~~~~-------~~~~~ 316 (431)
T PRK06209 257 FAVSALA---GKREYMEL--------GG--LEHTDRERVFLLSTTHGAETHALAAAIATMAIYRDEDV-------IERLH 316 (431)
T ss_pred cccEEEE---EHHHHHhh--------hc--ccccCCCCceeeccCCCCCHHHHHHHHHHHHHHhccCH-------HHHHH
Confidence 8888884 66665542 00 1000 11 1122333444444444332 2111 22222
Q ss_pred HHHHHHHHHHHHHhhhccCCCCCcccccCCcceE--Eec--C---C-CH----HHHHHHHHcccEEEeCCCeEEeccCCh
Q 012238 382 GRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMF--SFT--G---L-NK----AQSDNMTNKWHVYMTKDGRISLAGLSL 449 (467)
Q Consensus 382 ~~~~~~r~~l~~~l~~~~g~~~~~~~~~~~~g~f--~~~--~---l-~~----~~~~~ll~~~gI~v~~ggRis~~~~~~ 449 (467)
+.-+..++.+.+... ++++.. .....|.+. .++ + . .. .+.+++++ +||++.+ =+|+... ++
T Consensus 317 ~~g~~l~~~L~~~~~-~~~~~~---~vr~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~~p~-l~is~~h-t~ 389 (431)
T PRK06209 317 EQGAKLAAGVNEAAA-EHGLQD---HVRVSGRPCCLTYSTLDGNGQPSQAFRTLFLQETIR-RGVLMPS-LVVSYAH-GD 389 (431)
T ss_pred HHHHHHHHHHHHHHH-hCCCCe---EEEeecceEEEEEecCCcccCCcHHHHHHHHHHHHH-CCccccc-ccccccC-CH
Confidence 323333333333333 344311 111122222 111 1 1 11 22445555 5998743 2555433 88
Q ss_pred hhHHHHHHHHHHHHHhc
Q 012238 450 AKCEYLADAIIDSYHNV 466 (467)
Q Consensus 450 ~~i~~~~~~l~~~l~~~ 466 (467)
+++++++++|.+++..+
T Consensus 390 ~dId~~l~~l~~~l~~~ 406 (431)
T PRK06209 390 ADIERTIDAVHGALGVY 406 (431)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999998754
No 336
>PLN02452 phosphoserine transaminase
Probab=99.37 E-value=4.8e-10 Score=110.87 Aligned_cols=326 Identities=15% Similarity=0.090 Sum_probs=185.5
Q ss_pred CCcEEecCcccCCCCCCCCchHHHHHHHHHHHhc-C-------CCCcCCC--CcchHHHHHHHHHHHhCCCCcccccC-c
Q 012238 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-G-------ENKEYLP--IEGLAAFNKVTAELLFGADNSVLKEQ-R 151 (467)
Q Consensus 83 ~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~-~-------~~~~Y~~--~~G~~~lr~aia~~l~~~~~~~~~~~-~ 151 (467)
.++++|+.| +..+|+.|++++...+.+ . ......+ ..-..+.++.+.+++... .+ +
T Consensus 6 ~~~~~f~pG-------P~~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~~f~~i~~~~~~~L~~l~~~p------~~y~ 72 (365)
T PLN02452 6 GRVFNFSAG-------PATLPANVLAKAQAELYNWEGSGMSVMEMSHRGKEFLSIIQKAEADLRELLDIP------DNYE 72 (365)
T ss_pred CceEeeeCC-------CCCCCHHHHHHHHHHHhcccccCccccccCCCchHHHHHHHHHHHHHHHHhCCC------CCce
Confidence 357889866 233578888887765311 0 0011111 122455556666665421 22 3
Q ss_pred eeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCc--chHHHHhhCCCCeEEeeeec-CCCCCCChhhHHHHHHcCCC
Q 012238 152 VATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWG--NHKNIFNDARVPWSEYRYYD-PKTVGLDFEGMIADIKAAPG 228 (467)
Q Consensus 152 i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~--~~~~~~~~~G~~~~~v~~~~-~~~~~~d~~~l~~~l~~~~~ 228 (467)
+++ ...|||.+++.+ ++..+.+||++++...+.. .+.+.++.+|...+.....+ +....++++++ +. ++
T Consensus 73 v~~-l~Gsgt~~~ea~--~~nl~~~~~~~l~~~~G~fg~r~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~----~~-~~ 144 (365)
T PLN02452 73 VLF-LQGGASTQFAAI--PLNLCKPGDKADFVVTGSWSKKAAKEAKKYCKTNVIASGKDEKYTKIPSVSEW----EL-TP 144 (365)
T ss_pred EEE-EeCccHHHHHHH--HHhcCCCCCeEEEEECCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCCChHHc----CC-CC
Confidence 444 268889999987 5666679998888876654 45667788887444432211 11224566654 22 24
Q ss_pred CcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCccc
Q 012238 229 GSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGL 308 (467)
Q Consensus 229 ~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~ 308 (467)
....+.+++....||+.+. ++.++. ++++|+|.+ +.+....++.+.+ .+++ .|..|++|+
T Consensus 145 ~~~~v~~~hnETstGv~~~--~~~~i~------~~~lvVDa~-Ss~g~~pidv~~~----------~v~~-~saqK~lGP 204 (365)
T PLN02452 145 DAKFVHICANETIHGVEFK--DYPDVG------NVPLVADMS-SNFLSKPVDVSKY----------GVIY-AGAQKNVGP 204 (365)
T ss_pred CCcEEEECCCCCCCcEecC--cccccC------CCeEEEECC-ccccCcccCHHHc----------CEEE-EecccccCC
Confidence 5567777878888899533 133442 379999999 5555432221111 2343 589999999
Q ss_pred CCCccceEEEecCCHHHHhhhh--hhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHH-HHHHHHHHHH
Q 012238 309 YAERIGAMNVVCSSSDLAARCC--EVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKA-EMEMMAGRIK 385 (467)
Q Consensus 309 ~G~RiG~~~~v~~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~-~l~~~~~~~~ 385 (467)
+| +|.++ ..++++++.. .+.+.++....+. ..++..+|.....++..+|+. + .++ .++.+.++.+
T Consensus 205 ~G--l~~v~---vr~~~l~~~~~~~~~~~~~~~~~~~--~s~~~TP~v~~i~~l~~aL~~--l---~~~gGl~~~~~r~~ 272 (365)
T PLN02452 205 SG--VTIVI---IRKDLIGNARPITPGMLDYKIHAEN--DSLYNTPPCFGIYMCGLVFED--L---LAQGGLKAMEKRNI 272 (365)
T ss_pred CC--eEEEE---EcHHHHhhcccCCCchhhHHHHHhc--CCccCChhHHHHHHHHHHHHH--H---HHccCHHHHHHHHH
Confidence 99 47665 5566665411 1122222221111 122334555554555444421 1 012 3788999999
Q ss_pred HHHHHHHHHhhhcc-CCCCCcccccC--CcceE-Ee--cCC--CHHHHHHHHHcccEEEeCCC------eEEe-ccCChh
Q 012238 386 NVRQKLFDSLSAKD-KSGKDWSFILR--QIGMF-SF--TGL--NKAQSDNMTNKWHVYMTKDG------RISL-AGLSLA 450 (467)
Q Consensus 386 ~~r~~l~~~l~~~~-g~~~~~~~~~~--~~g~f-~~--~~l--~~~~~~~ll~~~gI~v~~gg------Ris~-~~~~~~ 450 (467)
++.+++++.|+ +. |+-. ....+ ...+. .| .+. ..+|.+ .++++|+...+|. |+|. ..++.+
T Consensus 273 ~~a~~l~~~l~-~~~G~y~--~~~~~~~rs~~~vsF~~~~~~~~~~f~~-~~~~~g~~~~~G~r~~gg~R~s~yna~~~~ 348 (365)
T PLN02452 273 RKADLLYDAID-ESNGFYV--CPVEKSVRSLMNVPFTLGGSELEAEFVK-EAAKAGMVQLKGHRSVGGMRASIYNAMPLA 348 (365)
T ss_pred HHHHHHHHHHH-hCCCccc--CCCChHHhCCeEEEEEcCCchhHHHHHH-HHHHCCCcccCCccccCceEEECcCCCCHH
Confidence 99999999998 64 4311 11111 12222 22 222 233444 4455799999983 9984 557889
Q ss_pred hHHHHHHHHHHHHHh
Q 012238 451 KCEYLADAIIDSYHN 465 (467)
Q Consensus 451 ~i~~~~~~l~~~l~~ 465 (467)
+++.+++.+++.-++
T Consensus 349 ~v~~L~~~m~~f~~~ 363 (365)
T PLN02452 349 GVEKLVAFMKDFQAK 363 (365)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999987654
No 337
>PLN02263 serine decarboxylase
Probab=99.37 E-value=7.6e-10 Score=111.34 Aligned_cols=300 Identities=12% Similarity=0.034 Sum_probs=183.0
Q ss_pred chHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeee
Q 012238 127 GLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRY 206 (467)
Q Consensus 127 G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~ 206 (467)
+..++.+.+-+|+....|.+-+.-.=++ |+|||+++..+........+...|+++.-++..+..+++.+|.+++.+|+
T Consensus 130 ~s~~~E~~Vi~wla~L~g~p~~~~~G~v--tsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~Sv~KAa~llgi~~~~Vp~ 207 (470)
T PLN02263 130 HSRQFEVGVLDWFARLWEIEKNEYWGYI--TNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDT 207 (470)
T ss_pred hHHHHHHHHHHHHHHHhCCCCCCCeEEE--eCcHHHHHHHHHHHHHhhcCCcEEEEcCCccHHHHHHHHhcCCcceEecc
Confidence 5667777777777655443211111244 89999999887333223335558889999999999999999999999998
Q ss_pred ecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCC-----eeEEeccCCCCCCCCCCC
Q 012238 207 YDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNH-----IPFFDVAYQGFASGSLDN 281 (467)
Q Consensus 207 ~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~-----~li~Deay~~~~~~~~~~ 281 (467)
+.++.+|++.|++++.+...++.+++.+.+..+||.+=+ +++|.++|+++|+ |+.+|.+|.++.....+
T Consensus 208 --d~~g~mD~~aL~~aI~~d~~~P~iVvataGTT~~GAiDp---i~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~- 281 (470)
T PLN02263 208 --LVSGEIDCADFKAKLLANKDKPAIINVNIGTTVKGAVDD---LDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVK- 281 (470)
T ss_pred --CCCCcCcHHHHHHHHHhCCCCcEEEEEEecCCCCcCCCC---HHHHHHHHHHcCCccCCeeEEEeccchhhHhhhcc-
Confidence 456789999999999864445677777889999999644 5677777999986 99999999887541110
Q ss_pred ChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecCCHHHHhhhhhhhHHHHHH---HHHhhccCc-cCCC--chH
Q 012238 282 DASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKS---QLKRLARPM-YSNP--PVH 355 (467)
Q Consensus 282 ~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~---~l~~~~~~~-~~~~--~~~ 355 (467)
....+ .+.. .-.=+.-+.+|.++.| ...|.+. ...+ ..+. +.. .+....... .+-. ..+
T Consensus 282 ~~~~~-df~~--~vDSIsvD~HK~l~~P-~~cgvll--~R~~-~~~~--------~~~~~~Yl~~~d~ti~gSR~g~~al 346 (470)
T PLN02263 282 RAPKV-TFKK--PIGSVSVSGHKFVGCP-MPCGVQI--TRME-HINV--------LSSNVEYLASRDATIMGSRNGHAPI 346 (470)
T ss_pred ccccc-CCCc--CccEEEECCccccCCC-cCEEEEE--Eehh-hHhh--------hccChHhhCCCCCCcCCCCCcHHHH
Confidence 11001 1111 1223356778988755 6677775 3332 2222 100 011100011 1111 122
Q ss_pred HHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceEEecCCCHHHHHHHHHcccEE
Q 012238 356 GARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVY 435 (467)
Q Consensus 356 ~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~~~g~f~~~~l~~~~~~~ll~~~gI~ 435 (467)
..++....+. .+.++++.++..++.+++.+.|+ +.|+ ..+..|.....+|...+.+. ..+++.+.
T Consensus 347 ~lW~~L~~~G--------~~G~~~~i~~~~~~A~~l~~~l~-~~g~---~~~~~p~s~~V~f~~p~~~~---~~~gW~L~ 411 (470)
T PLN02263 347 FLWYTLNRKG--------YRGFQKEVQKCLRNAHYLKDRLR-EAGI---SAMLNELSSTVVFERPKDEE---FVRRWQLA 411 (470)
T ss_pred HHHHHHHHhC--------HHHHHHHHHHHHHHHHHHHHHHH-hCCC---eEEeCCCceEEEEecCchHH---hhcceEEc
Confidence 2222222222 24466777777788889999998 7764 33455665555554333222 12334333
Q ss_pred EeCCC-eEEecc-CChhhHHHHHHHHHHHHH
Q 012238 436 MTKDG-RISLAG-LSLAKCEYLADAIIDSYH 464 (467)
Q Consensus 436 v~~gg-Ris~~~-~~~~~i~~~~~~l~~~l~ 464 (467)
..+.- +|.+.. .+.+.++++++.|++..+
T Consensus 412 ~~~~~~Hivvmphv~~~~id~fi~DL~~~~~ 442 (470)
T PLN02263 412 CQGNIAHVVVMPSVTIEKLDYFLKELVEKRS 442 (470)
T ss_pred cCCCcEEEEEcCCCCHHHHHHHHHHHHHHHh
Confidence 33322 777654 467889999999988765
No 338
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.37 E-value=1.6e-09 Score=102.89 Aligned_cols=311 Identities=17% Similarity=0.163 Sum_probs=187.2
Q ss_pred hHHHHHHHHHHHhcC-----CCCc-CCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCC
Q 012238 103 LDVVKKAENLMLERG-----ENKE-YLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFP 176 (467)
Q Consensus 103 ~~~v~~a~~~~~~~~-----~~~~-Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~ 176 (467)
.|.|++|+.+.++.. -..+ -+...-.-+|.+.+|++ +++ +.-+++ .+.--|....+..++...|
T Consensus 187 Hp~V~~A~~~tl~~hG~GAGGTRNIsG~s~~hv~LE~eLA~L-HqK------~aALlF---sSCfVANDstLftLak~lp 256 (570)
T KOG1360|consen 187 HPEVLDAMHDTLDRHGAGAGGTRNISGHSKHHVRLEAELADL-HQK------EAALLF---SSCFVANDSTLFTLAKKLP 256 (570)
T ss_pred ChHHHHHHHHHHHHcCCCcCCccccCCCCchhhhHHHHHHHH-hcC------cceeee---eeeeeccchHHHHHHHHCC
Confidence 578888888877431 0011 11122346788888888 555 223333 1211112222113455668
Q ss_pred CCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcC-CCCcEEEEeCCCCCCCCCCCCHHHHHHHH
Q 012238 177 GAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA-PGGSFILLHGCAHNPTGIDPTPEQWEKIA 255 (467)
Q Consensus 177 gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~-~~~~~~i~i~~p~NPTG~~~~~~~l~~l~ 255 (467)
|-.+.--+--+.....-++..|++-..+.. .|++.|++.++.. +..+++|..-+.+.-+|.+-+.| +|+
T Consensus 257 gcei~SD~gNHASMI~GIrns~v~K~IFrH-------ND~~hL~~lL~~~~~svPKivAFEtVhSM~Gavcple---elc 326 (570)
T KOG1360|consen 257 GCEIFSDEGNHASMIQGIRNSRVPKHIFRH-------NDLDHLEQLLQSSPKSVPKIVAFETVHSMDGAVCPLE---ELC 326 (570)
T ss_pred CcEEeccccchHHHHHHhhhcCCcceeecc-------CCHHHHHHHHHhCCCCCCceEEEeeeeccCCCcCCHH---HHH
Confidence 876665555444555555666665444433 5899999999875 35678888899999999988866 788
Q ss_pred HHHHhcCCeeEEeccCCCCCCCCCCC---ChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecCCHHHHhhhhhh
Q 012238 256 DVIQEKNHIPFFDVAYQGFASGSLDN---DASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARCCEV 332 (467)
Q Consensus 256 ~~~~~~~~~li~Deay~~~~~~~~~~---~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~ 332 (467)
+++++||.+-++||++.--.||.... +...+ ...-.|+.+++.|.||+-| ||| ++...+++.
T Consensus 327 Dvah~yGAiTFlDEVHAVGlYG~rGaGvgerdGv-----m~kvDiIsGTLgKafGcVG---GYI---Aat~~LvDm---- 391 (570)
T KOG1360|consen 327 DVAHKYGAITFLDEVHAVGLYGPRGAGVGERDGV-----MHKVDIISGTLGKAFGCVG---GYI---AATRKLVDM---- 391 (570)
T ss_pred HHHHHhCceeeeehhhhhccccCCCCCccccCCc-----chhhhhcccchhhhccccc---cee---hhhhhHHHH----
Confidence 88999999999999975433432100 00011 1123578999999999887 998 488889998
Q ss_pred hHHHHHHHHHhhccCccCCCchHHHHHHHH--HhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccC
Q 012238 333 AVIQVKSQLKRLARPMYSNPPVHGARIVAN--VVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR 410 (467)
Q Consensus 333 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~ 410 (467)
+++.....+- .++-||.+...+... +|.. ++-+..++..+++-.++.+.|. +.|+| +++.
T Consensus 392 ----iRSyAaGFIF-TTSLPP~vl~GAleaVr~lk~--------~eg~~lR~~hqrnv~~~kq~l~-~~GiP----Vi~~ 453 (570)
T KOG1360|consen 392 ----IRSYAAGFIF-TTSLPPMVLAGALEAVRILKS--------EEGRVLRRQHQRNVKYVKQLLM-ELGIP----VIPN 453 (570)
T ss_pred ----HHHhcCceEE-ecCCChHHHHhHHHHHHHHhh--------hhhHHHHHHHHHHHHHHHHHHH-HcCCc----ccCC
Confidence 4443222111 133444443333222 2221 1234556666677788888888 88864 3333
Q ss_pred Ccc-eEEecC---CCHHHHHHHHHcccEEEeCC-------C----eEEecc-CChhhHHHHHHHHHHHHHhc
Q 012238 411 QIG-MFSFTG---LNKAQSDNMTNKWHVYMTKD-------G----RISLAG-LSLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 411 ~~g-~f~~~~---l~~~~~~~ll~~~gI~v~~g-------g----Ris~~~-~~~~~i~~~~~~l~~~l~~~ 466 (467)
..- .-+.++ ++.+.++.|+.+++|++-.- | ||.-+. .+++-++.+++++..+.+++
T Consensus 454 pSHIiPv~vgda~l~~~~sd~Li~~h~iYvQaINyPTV~rG~E~LRiaPTP~HT~~mm~~lv~~l~~vw~~v 525 (570)
T KOG1360|consen 454 PSHIIPVRVGDAALAKQASDILISKHNIYVQAINYPTVARGTERLRIAPTPHHTPQMMNILVNALLDVWNEV 525 (570)
T ss_pred CcceeeeeccCHHHHHHHHHHHHHhcCeEEEeccCCcccccceeeecCCCCCCCHHHHHHHHHHHHHHHHHc
Confidence 322 223333 24556888999999998442 4 554332 26677888888888887654
No 339
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.37 E-value=5.7e-10 Score=110.39 Aligned_cols=265 Identities=14% Similarity=0.083 Sum_probs=158.6
Q ss_pred cCCchhHHHHHHHHHHHh-CCCCEEEEcCCCCcc-hH-HHHhhCCC-CeEEeeeecCCCCCCChhhHHHHHHcCCCCcEE
Q 012238 157 GLSGTGSLRLAAALIERY-FPGAKVLISSPTWGN-HK-NIFNDARV-PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFI 232 (467)
Q Consensus 157 t~ggt~al~l~~~~l~~~-~~gd~Vlv~~P~y~~-~~-~~~~~~G~-~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~ 232 (467)
+.+||++++.+ +...+ .+||+|++.. .|+. +. ++++.+|+ ++..+.. +.+..+|+++++. .+.
T Consensus 64 ~GsGT~a~Eaa--~~nl~~~~g~~vLv~g-~FG~r~~~eia~~~g~~~v~~l~~--~~g~~~~~~~ve~------~~~-- 130 (374)
T TIGR01365 64 PASDTGAVEMA--LWSMLGCRGVDVLAWE-SFGKGWVTDVTKQLKLPDVRVLEA--EYGKLPDLKKVDF------KND-- 130 (374)
T ss_pred CCchHHHHHHH--HHHcCCCCCCeEEEEC-HHHHHHHHHHHHhcCCCCcEEEcC--CCCCCCCHHHcCC------CCC--
Confidence 89999999998 56666 3889999876 5543 35 88899999 4777765 5667789998862 122
Q ss_pred EEeCCCCCCCCCCCCHHHHHHHHHHHHh-cCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCC
Q 012238 233 LLHGCAHNPTGIDPTPEQWEKIADVIQE-KNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAE 311 (467)
Q Consensus 233 i~i~~p~NPTG~~~~~~~l~~l~~~~~~-~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~ 311 (467)
+++++....||+..+.+ +++ ++ ++.++|+|.+ +.+.....+.+ .-.+++.|..|++++|+-
T Consensus 131 v~~vhnETSTGv~npv~---~i~---~~~~~~lliVDav-Ss~g~~~l~~d-----------~iDv~~tgsQK~L~~ppG 192 (374)
T TIGR01365 131 VVFTWNGTTSGVRVPNG---DFI---PADREGLTICDAT-SAAFAQDLDYH-----------KLDVVTFSWQKVLGGEGA 192 (374)
T ss_pred EEEecCCCchheecccc---ccc---cccCCCcEEEEcc-chhcCCCCChh-----------HCcEEEEechhccCCCCc
Confidence 34677778889999874 443 32 5899999999 44543322211 134667777898887651
Q ss_pred ccceEEEecCCHHHHhhhhh--h--hHHHHHH---H---HHhhccCccC-CCchHHHHHHHHHhCChhhHHHHHH-HHHH
Q 012238 312 RIGAMNVVCSSSDLAARCCE--V--AVIQVKS---Q---LKRLARPMYS-NPPVHGARIVANVVGNPALFDEWKA-EMEM 379 (467)
Q Consensus 312 RiG~~~~v~~~~~~~~~~~~--~--~~~~~~~---~---l~~~~~~~~~-~~~~~~~~~~~~~L~~~~~~~~~~~-~l~~ 379 (467)
++.++ .+++.+++... . .+..+.+ . ........+. .++.....++..+|. ...++ .++.
T Consensus 193 -ls~v~---vs~~Al~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~t~~TP~v~~l~a~~~~l~-----~i~~egGle~ 263 (374)
T TIGR01365 193 -HGMLI---LSPRAVARLESYTPAWPLPKIFRLTKGGKLNKKIFEGSTINTPSMLCVEDWLDALK-----WAESIGGLKP 263 (374)
T ss_pred -eEEEE---ECHHHHHHHhhcCCCCCChhhhccccccchhhhhhcCCCCCChHHHHHHHHHHHHH-----HHHHccCHHH
Confidence 34443 45555554110 0 0001100 0 0001111122 233333333333331 11112 3889
Q ss_pred HHHHHHHHHHHHHHHhhhccCCCCCcccccC----Ccc--e-EEec-C-C-----C-----HHHHHHHHHcccEEEeCCC
Q 012238 380 MAGRIKNVRQKLFDSLSAKDKSGKDWSFILR----QIG--M-FSFT-G-L-----N-----KAQSDNMTNKWHVYMTKDG 440 (467)
Q Consensus 380 ~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~----~~g--~-f~~~-~-l-----~-----~~~~~~ll~~~gI~v~~gg 440 (467)
+.+|++++.+.+++.++ ++|. +..... .+. . +.+. + + + .+.+...++++||.+.+|.
T Consensus 264 ~~~Rh~~~a~~l~~~l~-~lg~---l~~~~~~~~~rS~tvt~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~i~~G~ 339 (374)
T TIGR01365 264 LIARADDNLAVLEAFVA-KNNW---IHFLAETPEIRSNTSVCLKVVDPAIDALDEDAQADFAKELISTLEKEGVAYDIGS 339 (374)
T ss_pred HHHHHHHHHHHHHHHHH-HCCC---cccCCCChhhcCCCeEEEEeCCccccccccchhhHHHHHHHHHHHHCCEEEeccc
Confidence 99999999999999999 8883 122221 111 1 1121 2 3 1 3446666666799998772
Q ss_pred --------eEE-eccCChhhHHHHHHHHHHHHHh
Q 012238 441 --------RIS-LAGLSLAKCEYLADAIIDSYHN 465 (467)
Q Consensus 441 --------Ris-~~~~~~~~i~~~~~~l~~~l~~ 465 (467)
||+ ++.++.++++.+++.|.=+...
T Consensus 340 ~~~~~~~fRIg~~G~i~~~di~~l~~~l~~~~~~ 373 (374)
T TIGR01365 340 YRDAPSGLRIWCGATVEKSDLECLCPWLDWAFAL 373 (374)
T ss_pred cccCCCceEEecCCcCCHHHHHHHHHHHHHHHhc
Confidence 996 6778999999999999766543
No 340
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.37 E-value=1.3e-09 Score=111.09 Aligned_cols=340 Identities=11% Similarity=0.019 Sum_probs=173.8
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHH--HHHHHHhcC-----CCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceee
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKK--AENLMLERG-----ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVAT 154 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~--a~~~~~~~~-----~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~ 154 (467)
+.+.||+..|.--..-|. -.|.|.+ ++.+.+..- ....| ......++-+.+++..... .-+++.+
T Consensus 44 G~~ylD~~~g~~~~~lGh--~~p~v~~~~ai~~ql~~l~~~~~~~~~~-~~~~~~~la~~l~~~~~p~-----~~~~v~f 115 (443)
T PRK08297 44 GRRYLDMFTFFASSALGM--NHPALADDPEFRAELGRAALNKPSNSDV-YTVEMARFVDTFARVLGDP-----ELPHLFF 115 (443)
T ss_pred CCEeeecccCHhhhcCCC--CChHHhhHHHHHHHHHHhhhhccccCCc-CCHHHHHHHHHHHhhcCCC-----CCCEEEE
Confidence 457889877744222233 2566666 666655321 11122 2223334444444442111 1358888
Q ss_pred eecCCchhHHHHHHHHHHHhC------CC------CEEEEcCCCCcchHHHHh-hCCCCeE-----------Eeeeec--
Q 012238 155 VQGLSGTGSLRLAAALIERYF------PG------AKVLISSPTWGNHKNIFN-DARVPWS-----------EYRYYD-- 208 (467)
Q Consensus 155 ~~t~ggt~al~l~~~~l~~~~------~g------d~Vlv~~P~y~~~~~~~~-~~G~~~~-----------~v~~~~-- 208 (467)
+++|++|.+.+.++..... .| .+|+...-+|.+...... ..|.... .++...
T Consensus 116 --~~SGsEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (443)
T PRK08297 116 --VDGGALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLR 193 (443)
T ss_pred --eCchHHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccccCCCCCC
Confidence 9999999999866543331 12 579999988876543322 2221100 011000
Q ss_pred ----CCC----C---CCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCCeeEEeccCCCCCC
Q 012238 209 ----PKT----V---GLDFEGMIADIKAAPGGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFAS 276 (467)
Q Consensus 209 ----~~~----~---~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~-~~~~~l~~l~~~~~~~~~~li~Deay~~~~~ 276 (467)
..+ . .-+++.+++.+...+.+...+++...+--.|.. ++.+.+++|.++|++||+++|.||++.+|.-
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tGfGR 273 (443)
T PRK08297 194 FPLPGEDLEEVEALEAEALAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQTGVGL 273 (443)
T ss_pred CCCcccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCc
Confidence 000 0 012455566676544566666665544444554 6788999999999999999999999988743
Q ss_pred CCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHH-hhccCccCCCchH
Q 012238 277 GSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLK-RLARPMYSNPPVH 355 (467)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~ 355 (467)
.+ ..+.. ....-.++++ .|+|.++ +|.++ ++ .++.+. ....+. ......+.+.+.+
T Consensus 274 tG---~~~a~-~~~gv~PDiv---~~gK~l~-----~~a~l--~~-~~i~~~--------~~~~~~~~~~~~~T~~gnpl 330 (443)
T PRK08297 274 TG---TAWAY-QQLGVRPDIV---AFGKKTQ-----VCGIM--AG-RRVDEV--------EDNVFAVSSRINSTWGGNLV 330 (443)
T ss_pred cc---hHHHH-HhcCCCCCEE---Eeccccc-----cccee--cc-hHHHHh--------hhhhccCccccCCCCCccHH
Confidence 21 12222 1112233444 3689874 23332 23 332221 000011 0111123344555
Q ss_pred HHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhh---ccCCCCCcccccCCcceEEecCC-C----HHHHHH
Q 012238 356 GARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSA---KDKSGKDWSFILRQIGMFSFTGL-N----KAQSDN 427 (467)
Q Consensus 356 ~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~---~~g~~~~~~~~~~~~g~f~~~~l-~----~~~~~~ 427 (467)
+..++...|+- + ++ +...++.+++-+++.+.|++ +.+. ....+...|. ++.+.+ + ..+++.
T Consensus 331 ~~aaa~a~L~~--l----~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~--~~~~vrg~G~-~~~i~~~~~~~~~~~~~~ 399 (443)
T PRK08297 331 DMVRARRILEV--I----EE--DGLVENAARQGEYLLARLEELAAEFPA--VVSNVRGRGL-MCAFDLPTTADRDEVIRR 399 (443)
T ss_pred HHHHHHHHHHH--H----Hh--cCHHHHHHHHHHHHHHHHHHHHHHCCC--cceeeeccce-EEEEEecCHHHHHHHHHH
Confidence 55555555431 1 00 12233333334444444430 2221 0112234443 333322 2 234556
Q ss_pred HHHcccEEEeCCC----eEEec-cCChhhHHHHHHHHHHHHHhc
Q 012238 428 MTNKWHVYMTKDG----RISLA-GLSLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 428 ll~~~gI~v~~gg----Ris~~-~~~~~~i~~~~~~l~~~l~~~ 466 (467)
+++ +||++.++| ||+.+ .++++++++++++|.++++++
T Consensus 400 l~~-~Gvl~~~~~~~~lr~~P~l~~t~~eid~~l~~l~~~l~~~ 442 (443)
T PRK08297 400 LWE-EGVLVLPCGERSIRFRPALTVTTEEIDAAIDALRRALPEV 442 (443)
T ss_pred HHH-CCEEEecCCCCeEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence 664 699998875 66432 238899999999999999865
No 341
>PLN02590 probable tyrosine decarboxylase
Probab=99.36 E-value=2.6e-09 Score=110.16 Aligned_cols=338 Identities=10% Similarity=0.047 Sum_probs=195.2
Q ss_pred hHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccc-----cCceeeeecCCchhHHHHHHHHHHH--h-
Q 012238 103 LDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLK-----EQRVATVQGLSGTGSLRLAAALIER--Y- 174 (467)
Q Consensus 103 ~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~-----~~~i~~~~t~ggt~al~l~~~~l~~--~- 174 (467)
+..+-+.+...++.. ...|...++..++.+.+.+|+.+..|.+-. ...=++ +.|||+|...+...... .
T Consensus 144 ~~~lgd~l~sa~n~~-~~~~~~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~--~sGgSeAnl~al~aAR~~~~~ 220 (539)
T PLN02590 144 AGFLGEMLNAGLSVV-GFTWLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVI--QGTGCEAVLVVVLAARDRILK 220 (539)
T ss_pred HHHHHHHHHHhcccc-cCCcccCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEE--cCchHHHHHHHHHHHHHHHHh
Confidence 344444455554432 245555667778888888888766654321 122344 79999988765222111 0
Q ss_pred ------CCCCEEEEcCCCCcchHHHHhhCCC---CeEEeeeecCCCCCCChhhHHHHHHcC---CCCcEEEEeCCCCCCC
Q 012238 175 ------FPGAKVLISSPTWGNHKNIFNDARV---PWSEYRYYDPKTVGLDFEGMIADIKAA---PGGSFILLHGCAHNPT 242 (467)
Q Consensus 175 ------~~gd~Vlv~~P~y~~~~~~~~~~G~---~~~~v~~~~~~~~~~d~~~l~~~l~~~---~~~~~~i~i~~p~NPT 242 (467)
.+.-.|++++-++......++.+|+ .++.+|++...++.+|++.|++++++. ...+.+|+-+.+...|
T Consensus 221 ~~g~~~~~~~vvy~S~~aH~Sv~KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~t 300 (539)
T PLN02590 221 KVGKTLLPQLVVYGSDQTHSSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSS 300 (539)
T ss_pred hhcccCCCCEEEEecCCchHHHHHHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCC
Confidence 0222566677888889999999998 588888854456889999999999752 2346777777788899
Q ss_pred CCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCC-eEEEEecCccCcccCCCccceEEEecC
Q 012238 243 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGM-ELLVAQSYSKNLGLYAERIGAMNVVCS 321 (467)
Q Consensus 243 G~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~S~SK~~~~~G~RiG~~~~v~~ 321 (467)
|.+ +.+++|+++|++||+|+.+|.+|.++..-.+ ..+.+...-+ -.=+.-+++|.+..| .-.|.+. +.
T Consensus 301 Gai---Dpl~~Ia~i~~~~g~WlHVDaA~GG~al~~~-----~~r~~~~Gie~ADSit~D~HK~l~~p-~~cg~ll--vr 369 (539)
T PLN02590 301 AAV---DPLVPLGNIAKKYGIWLHVDAAYAGNACICP-----EYRKFIDGIENADSFNMNAHKWLFAN-QTCSPLW--VK 369 (539)
T ss_pred ccc---CCHHHHHHHHHHhCCeEEEecchhhhhhcCh-----hhHHHhcCCccCCEEEECchhhcCcC-cCEEEEE--ec
Confidence 985 4566888889999999999999998764211 1222322211 223456788988744 5567664 35
Q ss_pred CHH-HHhh-hhhhhHHHHHH-H------HHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 012238 322 SSD-LAAR-CCEVAVIQVKS-Q------LKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLF 392 (467)
Q Consensus 322 ~~~-~~~~-~~~~~~~~~~~-~------l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~ 392 (467)
++. +.+. ..++.|..... . +....-.......++..+++...+. .+.++++.++.-+..+++.
T Consensus 370 ~~~~l~~a~~~~~~YL~~~~~~~~~~~d~~d~~i~lsRr~raLklW~~lr~~G--------~~G~~~~i~~~~~lA~~~~ 441 (539)
T PLN02590 370 DRYSLIDALKTNPEYLEFKVSKKDTVVNYKDWQISLSRRFRSLKLWMVLRLYG--------SENLRNFIRDHVNLAKHFE 441 (539)
T ss_pred CHHHHHHHhhcCHHHhCCcccccccCCCccccCCCCCCchHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHH
Confidence 443 2222 00000000000 0 0000000000011111122211111 3446677777778888899
Q ss_pred HHhhhccCCCCCcccccC-CcceEEec--C--CC--------HHHHHHHHHcccEEEeCC---C----eEEeccC--Chh
Q 012238 393 DSLSAKDKSGKDWSFILR-QIGMFSFT--G--LN--------KAQSDNMTNKWHVYMTKD---G----RISLAGL--SLA 450 (467)
Q Consensus 393 ~~l~~~~g~~~~~~~~~~-~~g~f~~~--~--l~--------~~~~~~ll~~~gI~v~~g---g----Ris~~~~--~~~ 450 (467)
+.++ +.+ .|+++.+ .-+..+|- + .+ .++.+++.+...+++.+. | |+++.+. +++
T Consensus 442 ~~l~-~~~---~fel~~~~~l~iVcFr~~~~~~~~~~~~~ln~~l~~~l~~~G~~~vs~t~~~g~~~lR~~i~n~~T~~~ 517 (539)
T PLN02590 442 DYVA-QDP---SFEVVTTRYFSLVCFRLAPVDGDEDQCNERNRELLAAVNSTGKIFISHTALSGKFVLRFAVGAPLTEEK 517 (539)
T ss_pred HHHh-cCC---CeEEecCCceEEEEEEecCCCCCHHHHHHHHHHHHHHHHhCCCEEEEeeEECCEEEEEEEecCCCCCHH
Confidence 8888 653 2565443 33333332 1 12 233445555545555553 4 9988653 668
Q ss_pred hHHHHHHHHHHHHHhc
Q 012238 451 KCEYLADAIIDSYHNV 466 (467)
Q Consensus 451 ~i~~~~~~l~~~l~~~ 466 (467)
+++.+++.|.+...++
T Consensus 518 dv~~~~~~i~~~a~~~ 533 (539)
T PLN02590 518 HVTEAWQIIQKHASKF 533 (539)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999876653
No 342
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.35 E-value=5.5e-09 Score=106.96 Aligned_cols=340 Identities=11% Similarity=0.007 Sum_probs=177.9
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCc--CCCCcchHHHHHHHHHHHhCCCCcccc-cCceeeeec-
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKE--YLPIEGLAAFNKVTAELLFGADNSVLK-EQRVATVQG- 157 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~--Y~~~~G~~~lr~aia~~l~~~~~~~~~-~~~i~~~~t- 157 (467)
+...||+..|.--..-|. -.|.|.+++.+.++...... +.+.....+|-+.+++.+-. ... .+.+++ +
T Consensus 62 G~~ylD~~~g~~~~~lGh--~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~la~~L~~~~p~----~~~~~~~v~f--~~ 133 (464)
T PRK06938 62 GRQFIDCLAGAGTLALGH--NHPVVIEAIQQVLADELPLHTLDLTTPVKDQFVQDLFASLPE----AFAREAKIQF--CG 133 (464)
T ss_pred CCEEEEccCCccccccCC--CCHHHHHHHHHHHHhhhcccccccCCHHHHHHHHHHHHhCcc----cccccceEEE--eC
Confidence 457899987754222233 36788888888775322111 11222222333333333211 111 124544 4
Q ss_pred CCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHH-hhCCC------------CeEEeeeecCC--CCC--------C
Q 012238 158 LSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF-NDARV------------PWSEYRYYDPK--TVG--------L 214 (467)
Q Consensus 158 ~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~-~~~G~------------~~~~v~~~~~~--~~~--------~ 214 (467)
++|++|.+.+.++........+|+...-+|.+..... ...|. .+..+|..... .++ .
T Consensus 134 ~SGSEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 213 (464)
T PRK06938 134 PTGTDAVEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRA 213 (464)
T ss_pred CCcHHHHHHHHHHHHHhhCCCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCccccccccCchhhHHHH
Confidence 7999999998665444433468888888887654322 21110 12233321110 000 1
Q ss_pred ChhhHHHHHHcCC---CCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHH
Q 012238 215 DFEGMIADIKAAP---GGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFA 290 (467)
Q Consensus 215 d~~~l~~~l~~~~---~~~~~i~i~~p~NPTG~~-~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~ 290 (467)
+.+.+++.+++.. .....+++-.-+--.|.+ ++.+-++++.++|++||+++|.||+..+|.-.+ ..+.. ...
T Consensus 214 ~~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG---~~~a~-e~~ 289 (464)
T PRK06938 214 NLHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTG---KMFAF-EHA 289 (464)
T ss_pred HHHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCc---HHHHH-Hhc
Confidence 3567777776421 234555555444444664 468899999999999999999999988884221 12222 111
Q ss_pred hcCCeEEEEecCccCcccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhH
Q 012238 291 TRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALF 370 (467)
Q Consensus 291 ~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~ 370 (467)
.-.+++++ ++|.++ .|+.+|.++ ..+++ +. +.......+.+.+.++..++.+.|+- +.
T Consensus 290 gv~PDiv~---~gKglg-gG~PlsAv~---~~~~~-~~------------~~~~~~~~T~~gnpla~Aaa~a~L~~--l~ 347 (464)
T PRK06938 290 GIIPDVVV---LSKAIG-GSLPLAVVV---YREWL-DT------------WQPGAHAGTFRGNQMAMAAGSATLRY--IK 347 (464)
T ss_pred CCCCCEEE---eecccc-CCCceEEEe---ehhHh-hc------------cCCCCCCCCCCcCHHHHHHHHHHHHH--HH
Confidence 22345444 389998 789999985 54443 44 22111122334555555565555431 11
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhh---ccCCCCCcccccCCcceEEecCC---------------CH----HHHHHH
Q 012238 371 DEWKAEMEMMAGRIKNVRQKLFDSLSA---KDKSGKDWSFILRQIGMFSFTGL---------------NK----AQSDNM 428 (467)
Q Consensus 371 ~~~~~~l~~~~~~~~~~r~~l~~~l~~---~~g~~~~~~~~~~~~g~f~~~~l---------------~~----~~~~~l 428 (467)
+ ++..++.++.-+++.+.|++ +.+. +..+...|-++ -+.+ +. .+...+
T Consensus 348 ~------~~l~~~~~~~G~~l~~~L~~l~~~~~~---i~~VrG~Glm~-gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (464)
T PRK06938 348 E------HRLAEHAAAMGERLREHLRQLQRDYPQ---LGDVRGRGLML-GVEIVDPQGEPDALGHPPANGELASLIQREC 417 (464)
T ss_pred H------hHHHHHHHHHHHHHHHHHHHHHHhCCC---eeeeeccceEE-EEEeccCcccccccccCCccHHHHHHHHHHH
Confidence 1 12223333333444444430 2221 11222333322 1111 11 124455
Q ss_pred HHcccEEEeCCC------eEEec-cCChhhHHHHHHHHHHHHHhc
Q 012238 429 TNKWHVYMTKDG------RISLA-GLSLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 429 l~~~gI~v~~gg------Ris~~-~~~~~~i~~~~~~l~~~l~~~ 466 (467)
++ +||++.++| ||... .+++++++++++++.+++.++
T Consensus 418 ~~-~Gll~~~~g~~~~~l~~~Ppl~it~~eid~~~~~l~~~l~~~ 461 (464)
T PRK06938 418 LR-RGLILELGGRHGSVVRFLPPLIITAEQIDEVAEIFAEAVAAA 461 (464)
T ss_pred HH-CCeEEeecCCCCCEEEEECCCccCHHHHHHHHHHHHHHHHHH
Confidence 54 699997743 55422 248899999999999998753
No 343
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.35 E-value=3.5e-10 Score=118.68 Aligned_cols=178 Identities=11% Similarity=0.016 Sum_probs=117.5
Q ss_pred CCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEE
Q 012238 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSE 203 (467)
Q Consensus 124 ~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~ 203 (467)
|..-+.+..+.+|+.++.. .-.++ ++|+|.++..+ +++.+.+||+|++...|+-.....+...|+.+++
T Consensus 193 ~~G~i~eAe~~aA~~fgAd-------~tyfv--vNGTS~~n~av--~~a~~~~Gd~VLvdRN~HKSv~~aLilsga~PVY 261 (713)
T PRK15399 193 HTGPHLEAEEYIARTFGAE-------QSYIV--TNGTSTSNKIV--GMYAAPAGSTLLIDRNCHKSLAHLLMMSDVVPIW 261 (713)
T ss_pred CChHHHHHHHHHHHHhCCC-------cEEEE--eCChHHHHHHH--HHHhcCCCCEEEeecccHHHHHHHHHHcCCeeEE
Confidence 3434566666667764332 23444 79999999887 6778889999999999998888899999999999
Q ss_pred eeee-cCC--CCCCCh-----hhHHHHHHcCCCC--cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCee-EEeccCC
Q 012238 204 YRYY-DPK--TVGLDF-----EGMIADIKAAPGG--SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIP-FFDVAYQ 272 (467)
Q Consensus 204 v~~~-~~~--~~~~d~-----~~l~~~l~~~~~~--~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~l-i~Deay~ 272 (467)
++.. ++. -++++. +.+++.+++.+.. ++.+++++| +--|++++.+++.++ | |+.+ ++||||.
T Consensus 262 l~P~~n~~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~p-TYdGi~yd~~~I~~~---~---g~~~ilvDEAhg 334 (713)
T PRK15399 262 LKPTRNALGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNS-TYDGLLYNTDWIKQT---L---DVPSIHFDSAWV 334 (713)
T ss_pred ecccccccCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECC-CCCceeeCHHHHHHH---h---CCCEEEEeccch
Confidence 8542 111 124555 8999999876432 245666554 344999998765555 5 5655 6999986
Q ss_pred CC-CCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecC
Q 012238 273 GF-ASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 321 (467)
Q Consensus 273 ~~-~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~ 321 (467)
.. .|.+.-.+..++......+..++++.|.+|.+ +|+.-+.++++.+
T Consensus 335 ah~~F~p~~~~~sam~~~~~aD~~i~~tQStHKtL--~alTQaS~iHvk~ 382 (713)
T PRK15399 335 PYTHFHPIYQGKSGMSGERVPGKVIFETQSTHKML--AAFSQASLIHIKG 382 (713)
T ss_pred hhhhcCcccCCcChhhCCCCCCeeeeeeeehhccc--cccchheeeeecC
Confidence 44 33321111222210001223567799999997 6788888877644
No 344
>PRK06149 hypothetical protein; Provisional
Probab=99.34 E-value=1.3e-09 Score=121.14 Aligned_cols=336 Identities=13% Similarity=0.088 Sum_probs=180.1
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCC-cCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCc
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENK-EYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 160 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~-~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~gg 160 (467)
+...||+..|.. ..-+-.|.|.+++.+.+...... .| ......+|-+.+++.+-.. -+.+++ +++|
T Consensus 584 G~~ylD~~~~~~----~lGh~hp~v~~Ai~~q~~~l~~~~~~-~~~~~~elae~L~~~~p~~------~~~v~f--~~SG 650 (972)
T PRK06149 584 GRSYLDMVNNVT----VLGHGHPRLAAAAARQWSLLNTNSRF-HYAAVAEFSERLAALAPDG------LDTVFL--VNSG 650 (972)
T ss_pred CCEEEECCCCcc----ccCCCCHHHHHHHHHHHHhccccccc-cCHHHHHHHHHHHHhCCCC------cCEEEE--eCCc
Confidence 457899987643 22223677888887776542211 12 2223445555555553111 247888 9999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHH-hhCC-------C------CeEEeeeecCC--CCC-CC-----hhh
Q 012238 161 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF-NDAR-------V------PWSEYRYYDPK--TVG-LD-----FEG 218 (467)
Q Consensus 161 t~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~-~~~G-------~------~~~~v~~~~~~--~~~-~d-----~~~ 218 (467)
++|.+.+.++...+....+|+...-+|.+..... ...+ . .+..++..+.. .+. .| .+.
T Consensus 651 sEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~ 730 (972)
T PRK06149 651 SEANDLAIRLAWAASGRRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRGADSAADYVRD 730 (972)
T ss_pred hHHHHHHHHHHHHhcCCCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHH
Confidence 9999998665444444467888888887543211 0000 0 01222221000 011 11 234
Q ss_pred HHHHHHc---CCCCcEEEEeCCCCCCCC-CCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCC
Q 012238 219 MIADIKA---APGGSFILLHGCAHNPTG-IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGM 294 (467)
Q Consensus 219 l~~~l~~---~~~~~~~i~i~~p~NPTG-~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~ 294 (467)
+++.++. .+.+...+++-....-.| ...+.+-++++.++|++||+++|+||+..+|.-.+ ...+....+ .-.+
T Consensus 731 ~~~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG--~~~~a~e~~-gv~P 807 (972)
T PRK06149 731 VVAQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLG--HYFWGFEQQ-GVVP 807 (972)
T ss_pred HHHHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccC--ccchhhhhc-CCCC
Confidence 4444432 223444555444333334 55678889999999999999999999976774321 111222111 2223
Q ss_pred eEEEEecCccCcccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhcc-CccCCCchHHHHHHHHHhCChhhHHHH
Q 012238 295 ELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLAR-PMYSNPPVHGARIVANVVGNPALFDEW 373 (467)
Q Consensus 295 ~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~L~~~~~~~~~ 373 (467)
+++ +++|.+| .|..+|+++ ..+++.+. +..... ..+.+.+.++..++.+.|+- +.+
T Consensus 808 Div---t~gK~lg-~G~Pl~av~---~~~~i~~~------------~~~~~~~~sT~~gnP~~~aaala~L~~--i~~-- 864 (972)
T PRK06149 808 DII---TMAKGMG-NGHPLGAVI---TRREIAEA------------LEAEGYFFSSTGGSPVSCRIGMAVLDV--LRE-- 864 (972)
T ss_pred CEE---Eeccccc-CCeeeEEEE---EcHHHHhh------------hccCCcccCCCCCCHHHHHHHHHHHHH--HHh--
Confidence 444 6799998 788899985 67777765 332100 11224555565666555531 110
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhh---ccCCCCCcccccCCcceEEecCC---------C----HHHHHHHHHcccEEEe
Q 012238 374 KAEMEMMAGRIKNVRQKLFDSLSA---KDKSGKDWSFILRQIGMFSFTGL---------N----KAQSDNMTNKWHVYMT 437 (467)
Q Consensus 374 ~~~l~~~~~~~~~~r~~l~~~l~~---~~g~~~~~~~~~~~~g~f~~~~l---------~----~~~~~~ll~~~gI~v~ 437 (467)
+...++.++.-++|.+.|++ +.++ +..+...| +++-+.+ + ..+...+++ +||++.
T Consensus 865 ----e~l~~~~~~~G~~l~~~L~~l~~~~~~---i~~vrG~G-l~~gvel~~~~~~~~~~~~~~~~i~~~l~~-~Gvl~~ 935 (972)
T PRK06149 865 ----EKLQENARRVGDHLKARLEALADRHPL---IGAVHGMG-LYLGVELVRDRQTLEPATEETAAICDRLLE-LGVIMQ 935 (972)
T ss_pred ----cCHHHHHHHHHHHHHHHHHHHHHhCCC---eEEEeecc-eEEEEEEecCcccCCCChHHHHHHHHHHHh-CCeEEe
Confidence 12333444444444444440 2222 11222333 3321111 1 123455555 699998
Q ss_pred CCC------eEEec-cCChhhHHHHHHHHHHHHHh
Q 012238 438 KDG------RISLA-GLSLAKCEYLADAIIDSYHN 465 (467)
Q Consensus 438 ~gg------Ris~~-~~~~~~i~~~~~~l~~~l~~ 465 (467)
+.| ||... .++++++++++++|.+++.+
T Consensus 936 ~~g~~~~vl~~~Ppl~it~~~id~~~~~l~~~l~~ 970 (972)
T PRK06149 936 PTGDHLNILKIKPPLCLDRESADFFVDMLDRVLTE 970 (972)
T ss_pred ecCCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHh
Confidence 865 33322 24889999999999999875
No 345
>PRK07483 hypothetical protein; Provisional
Probab=99.33 E-value=3e-09 Score=108.45 Aligned_cols=340 Identities=12% Similarity=0.093 Sum_probs=178.0
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCC--CCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCC
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE--NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 159 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~--~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g 159 (467)
+...||+..|..-..-|. -.|.|.+++.+.++... ...+... +....+++.|...... .-+++.+ +++
T Consensus 29 G~~ylD~~~g~~~~~lGh--~~p~v~~av~~ql~~~~~~~~~~~~~----~~~~~lae~L~~~~p~--~~~~v~f--~~s 98 (443)
T PRK07483 29 GKRYLDASGGAAVSCLGH--SHPRVIAAIHAQIDRLAYAHTSFFTT----EPAEALADRLVAAAPA--GLEHVYF--VSG 98 (443)
T ss_pred CCEEEEcCccHhhhccCC--CCHHHHHHHHHHHHhccCccccccCC----HHHHHHHHHHHHhCCC--CCCEEEE--cCC
Confidence 457899988744222232 36778888888876421 0111112 2333444444332110 1258888 999
Q ss_pred chhHHHHHHHHHHHhC-----CC-CEEEEcCCCCcchHH-HHhhCCC------------CeEEeeeecCCCC---CC---
Q 012238 160 GTGSLRLAAALIERYF-----PG-AKVLISSPTWGNHKN-IFNDARV------------PWSEYRYYDPKTV---GL--- 214 (467)
Q Consensus 160 gt~al~l~~~~l~~~~-----~g-d~Vlv~~P~y~~~~~-~~~~~G~------------~~~~v~~~~~~~~---~~--- 214 (467)
|++|.+.+.++...+. +| .+|+...-+|..... .+...|- .+..++....... ..
T Consensus 99 GsEAve~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 178 (443)
T PRK07483 99 GSEAVEAALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCYAYREQRAGESDE 178 (443)
T ss_pred cHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCccccccccCCCHH
Confidence 9999999866655441 33 478888888865532 2211111 1112221000000 00
Q ss_pred -----ChhhHHHHHHc-CCCCcEEEEeCCCCC-CCC-CCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHH
Q 012238 215 -----DFEGMIADIKA-APGGSFILLHGCAHN-PTG-IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSV 286 (467)
Q Consensus 215 -----d~~~l~~~l~~-~~~~~~~i~i~~p~N-PTG-~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~ 286 (467)
.++.+++.+.. .++....+++-..+- -.| ..++.+.+++|.++|++||+++|.||+..+|.-.+ ..+..
T Consensus 179 ~~~~~~~~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG---~~~a~ 255 (443)
T PRK07483 179 AYGQRLADELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTG---TLFAC 255 (443)
T ss_pred HHHHHHHHHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccCc---HHHHH
Confidence 02456665542 224455555554432 224 45678889999999999999999999988774221 12222
Q ss_pred HHHHhcCCeEEEEecCccCcccCCC-ccceEEEecCCHHHHhhhhhhhHHHHHHHHHhh----ccCccCCCchHHHHHHH
Q 012238 287 RLFATRGMELLVAQSYSKNLGLYAE-RIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRL----ARPMYSNPPVHGARIVA 361 (467)
Q Consensus 287 ~~~~~~~~~~i~~~S~SK~~~~~G~-RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~~ 361 (467)
....-.+++++ ++|.++ .|+ .+|.++ ..+++.+. +... ....+.+.+.++..++.
T Consensus 256 -~~~gv~PDiv~---~gK~l~-gG~~Pi~av~---~~~~i~~~------------~~~~~~~~~h~~T~~gnpl~~aaa~ 315 (443)
T PRK07483 256 -EEDGVAPDLVT---IAKGLG-AGYQPIGAVL---ASDRIYDA------------IADGSGFFQHGHTYLGHATACAAAL 315 (443)
T ss_pred -hhcCCCCCeee---ehhhhc-cCccccEEEE---EcHHHHHH------------HhcCCCccccCCCCCCCHHHHHHHH
Confidence 11122344443 489998 785 888885 67777665 3321 11123344555555555
Q ss_pred HHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhh---ccCCCCCcccccCCcceEE-ec--C------CC------HH
Q 012238 362 NVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSA---KDKSGKDWSFILRQIGMFS-FT--G------LN------KA 423 (467)
Q Consensus 362 ~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~---~~g~~~~~~~~~~~~g~f~-~~--~------l~------~~ 423 (467)
+.|+- + ++ +...++.+++-++|.+.|++ +.+. +..+...|-++- .+ + .+ ..
T Consensus 316 a~l~~--i----~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~---i~~vRG~Glm~gie~~~~~~~~~~~~~~~~~~~~ 384 (443)
T PRK07483 316 AVQRV--I----AE--DGLLANVRARGEQLRARLRERLGQHPH---VGDIRGRGLFVGVELVADRATKAPFDPALKLHAR 384 (443)
T ss_pred HHHHH--H----Hh--cCHHHHHHHHHHHHHHHHHHHHhcCCC---eeeEeecccEEEEEEeecccccCCCCchhhHHHH
Confidence 55421 1 10 12333333444444444430 2221 112223333321 11 1 01 12
Q ss_pred HHHHHHHcccEEEeCC--------C---eEEec-cCChhhHHHHHHHHHHHHHhc
Q 012238 424 QSDNMTNKWHVYMTKD--------G---RISLA-GLSLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 424 ~~~~ll~~~gI~v~~g--------g---Ris~~-~~~~~~i~~~~~~l~~~l~~~ 466 (467)
+.+.+++ +||++.+. | ||.-. .++++++++++++|.++++++
T Consensus 385 ~~~~~~~-~Gll~~~~~~~~~~~~~~~l~~~PpL~it~~eid~~~~~l~~~l~~~ 438 (443)
T PRK07483 385 IKREAMA-RGLMVYPMGGTIDGVRGDHVLLAPPFIITAAQIDEIVERLGDAIDAA 438 (443)
T ss_pred HHHHHHH-CCcEEEecCccccCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 3445555 69998653 2 55432 248899999999999998764
No 346
>PRK06148 hypothetical protein; Provisional
Probab=99.31 E-value=2.7e-09 Score=118.80 Aligned_cols=337 Identities=12% Similarity=0.042 Sum_probs=181.1
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcC-CCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCc
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 160 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~-~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~gg 160 (467)
+...||+..|.. .-|. -.|.|.+++.+.+... ....| ......+|-+.+++.+-. .-+.+.+ +++|
T Consensus 623 G~~ylD~~~g~~--~lGH--~hp~v~~Ai~~q~~~l~~~~~~-~~~~~~~lAe~L~~~~p~------~~~~v~f--~nSG 689 (1013)
T PRK06148 623 GRAYLDCFNNVC--HVGH--AHPRVVAAAARQAARLNTNTRY-LHDAIVAYAERLTATLPD------GLTVAFF--VNSG 689 (1013)
T ss_pred CCEEEEcccChh--hcCC--CCHHHHHHHHHHHhhcCCcCCc-CCHHHHHHHHHHHHhCCC------CcCEEEE--eCCc
Confidence 357888877743 2232 3678888888877542 22233 233334444444444211 0257788 9999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHH-HhhCC-------C-----CeEEeeeecC--CCCC-CC-------hh
Q 012238 161 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNI-FNDAR-------V-----PWSEYRYYDP--KTVG-LD-------FE 217 (467)
Q Consensus 161 t~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~-~~~~G-------~-----~~~~v~~~~~--~~~~-~d-------~~ 217 (467)
++|.+.+.++........+|+...-+|.+.... +...| . .+..++..+. ..+. .| .+
T Consensus 690 sEA~e~AlklAr~~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 769 (1013)
T PRK06148 690 SEANSLALRLARAHTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAE 769 (1013)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHH
Confidence 999999866654444446899988888655321 11111 0 1111111000 0011 11 13
Q ss_pred hHHHHHH---cCCCCcEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcC
Q 012238 218 GMIADIK---AAPGGSFILLHGCAHNPTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRG 293 (467)
Q Consensus 218 ~l~~~l~---~~~~~~~~i~i~~p~NPTG~-~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~ 293 (467)
.+++.++ ..+.....+++-..+--.|. ..+.+-++++.++|++||+++|.||+..+|.-.+ ...+....+ .-.
T Consensus 770 ~l~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG--~~~~a~e~~-gv~ 846 (1013)
T PRK06148 770 SVAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVG--SHWWAFETQ-GVV 846 (1013)
T ss_pred HHHHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCC--Ccchhhhhc-CCC
Confidence 3554443 22234555555544433344 5578889999999999999999999987874221 111222111 222
Q ss_pred CeEEEEecCccCcccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhc-cCccCCCchHHHHHHHHHhCChhhHHH
Q 012238 294 MELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLA-RPMYSNPPVHGARIVANVVGNPALFDE 372 (467)
Q Consensus 294 ~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~L~~~~~~~~ 372 (467)
++++ +++|.+| .|+.+|.++ ..+++.+. +..-. ...+.+.+.++..++.+.|+- +
T Consensus 847 PDiv---t~gK~lg-gG~Plgav~---~~~ei~~~------------~~~g~~~~~Tf~gnpla~aaa~a~L~~--i--- 902 (1013)
T PRK06148 847 PDIV---TMGKPIG-NGHPMGAVV---TTREIADS------------FDNGMEYFNTFGGNPVSCAIGLAVLDI--I--- 902 (1013)
T ss_pred ccee---eeccccc-CCcceEEEE---EcHHHHhh------------ccCCCccccCCCCCHHHHHHHHHHHHH--H---
Confidence 3433 4589998 789999995 67777765 32211 112334555565565555431 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhh---ccCCCCCcccccCCcceEEecCC---------C----HHHHHHHHHcccEEE
Q 012238 373 WKAEMEMMAGRIKNVRQKLFDSLSA---KDKSGKDWSFILRQIGMFSFTGL---------N----KAQSDNMTNKWHVYM 436 (467)
Q Consensus 373 ~~~~l~~~~~~~~~~r~~l~~~l~~---~~g~~~~~~~~~~~~g~f~~~~l---------~----~~~~~~ll~~~gI~v 436 (467)
++ +...++.++.-++|.+.|++ +.+. +..+...|- ++-+.+ + ..+.+.+++ +||++
T Consensus 903 -~~--e~l~~~~~~~G~~l~~~L~~l~~~~~~---i~~VrG~Gl-~~gvel~~~~~~~~~~~~~~~~i~~~~~~-~Gvl~ 974 (1013)
T PRK06148 903 -ED--EDLQRNALEIGNYLLAGLRELQDRFDI---IGDVRGMGL-FLGIELVTDRKTKAPATAIARYVKNGARE-RGILI 974 (1013)
T ss_pred -hh--ccHHHHHHHHHHHHHHHHHHHHHhCCC---ceEEeeece-EEEEEecCCccccCccHHHHHHHHHHHHh-CCeEE
Confidence 10 12333444444444554440 2222 111223333 322111 1 123445554 69999
Q ss_pred eCCC------eEEec-cCChhhHHHHHHHHHHHHHhc
Q 012238 437 TKDG------RISLA-GLSLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 437 ~~gg------Ris~~-~~~~~~i~~~~~~l~~~l~~~ 466 (467)
.+.| ||... .++++++++++++|.+++.++
T Consensus 975 ~~~g~~~~vlr~~Ppl~it~~~id~~l~~l~~~l~~~ 1011 (1013)
T PRK06148 975 GTEGPHDNVLKIRPPLIFSRADADHLLEVLDDVLAAA 1011 (1013)
T ss_pred eccCCCCCEEEEeCCccCCHHHHHHHHHHHHHHHHHH
Confidence 8754 55543 238899999999999998764
No 347
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.31 E-value=9.9e-09 Score=105.06 Aligned_cols=341 Identities=15% Similarity=0.082 Sum_probs=174.6
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCc--CCCCcchHHHHHHHHHHHhCCCCccccc-CceeeeecC
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKE--YLPIEGLAAFNKVTAELLFGADNSVLKE-QRVATVQGL 158 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~--Y~~~~G~~~lr~aia~~l~~~~~~~~~~-~~i~~~~t~ 158 (467)
+.+.|||..|.....-|. -.|.|.+++.+.+....... +.+. +.+..+|+.+.......... ..+++ ++
T Consensus 57 G~~ylD~~~g~~~~~lGH--~~p~v~~Ai~~q~~~~~~~~~~~~~~----~~~~~lAe~L~~~~p~~~~~~~~~f~--~~ 128 (459)
T PRK06931 57 GNQYLDCLAGAGTLALGH--NHPDVLQSIQDVLTSGLPLHTLDLTT----PLKDAFSEYLLSLLPGQGKEYCLQFT--GP 128 (459)
T ss_pred CCEEEEcccchhhccCCC--CCHHHHHHHHHHHhhhccccccccCC----HHHHHHHHHHHHhCCCccccceEEEe--CC
Confidence 458999988854222232 36788888888775422111 1122 33344455443321100001 12344 68
Q ss_pred CchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhh-CC------------CCeEEeeeecCCC--CC----CChhhH
Q 012238 159 SGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFND-AR------------VPWSEYRYYDPKT--VG----LDFEGM 219 (467)
Q Consensus 159 ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~-~G------------~~~~~v~~~~~~~--~~----~d~~~l 219 (467)
+|++|.+.+.++........+|+...-+|.+....... .| -.+..+|..+... +. -+.+.+
T Consensus 129 SGsEAve~AlklAr~~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (459)
T PRK06931 129 SGADAVEAAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVKAL 208 (459)
T ss_pred CcHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCccccccccCCchhHHHHH
Confidence 99999999866654444446899899888766543331 11 1122233211100 00 122323
Q ss_pred ----HHHHHc---CCCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHh
Q 012238 220 ----IADIKA---APGGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT 291 (467)
Q Consensus 220 ----~~~l~~---~~~~~~~i~i~~p~NPTG~~-~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~ 291 (467)
++.+.. .+++...+++-..+.-.|.. .+.+.++++.++|++||+++|.||+..+|.-.+ ..+... ...
T Consensus 209 ~~~~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG---~~~a~~-~~g 284 (459)
T PRK06931 209 TYYFENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFARTG---KMFAFE-HAG 284 (459)
T ss_pred HHHHHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcCc---hHHHhh-hcC
Confidence 233321 12334555554444444654 578889999999999999999999988874221 122221 112
Q ss_pred cCCeEEEEecCccCcccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHH
Q 012238 292 RGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFD 371 (467)
Q Consensus 292 ~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~ 371 (467)
-.+++++ ++|.++ .|+.+|.+. ..++ ++. +.......+.+.++++..++.+.|+- +.+
T Consensus 285 v~PDivt---~gK~l~-gG~Pi~av~---~~~~-~~~------------~~~~~~~~T~~gnpla~aaala~L~~--l~~ 342 (459)
T PRK06931 285 IEPDIIV---MSKAVG-GGLPLAVLG---IKKE-FDA------------WQPGGHTGTFRGNQLAMATGLTTLKI--LKE 342 (459)
T ss_pred CCCCEEE---eccccc-CCcceeeee---eHHH-Hhh------------ccCCCCCCCCCCCHHHHHHHHHHHHH--HHh
Confidence 2344443 489998 789898763 4444 344 32111122334555665665555431 100
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhh---ccCCCCCcccccCCcceEEe-c-CC------------CH----HHHHHHHH
Q 012238 372 EWKAEMEMMAGRIKNVRQKLFDSLSA---KDKSGKDWSFILRQIGMFSF-T-GL------------NK----AQSDNMTN 430 (467)
Q Consensus 372 ~~~~~l~~~~~~~~~~r~~l~~~l~~---~~g~~~~~~~~~~~~g~f~~-~-~l------------~~----~~~~~ll~ 430 (467)
+...++.++.-++|.+.|++ +.+. +..+...|.++-+ + .- +. .+...++
T Consensus 343 ------~~l~~~~~~~G~~l~~~L~~l~~~~~~---i~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 412 (459)
T PRK06931 343 ------ENLAQNAAERGEWLKAQLAELQKRYPC---IGNVRGRGLMIGIEIVDERQPADAMGSYPADGELAAAIQKACF- 412 (459)
T ss_pred ------CCHHHHHHHHHHHHHHHHHHHHHhCCC---eEeEecCceEEEEEEccCcccccccccCCccHHHHHHHHHHHH-
Confidence 01223333333334444430 2332 1222333333211 1 10 11 2233444
Q ss_pred cccEEEeCCC------eEEec-cCChhhHHHHHHHHHHHHHhc
Q 012238 431 KWHVYMTKDG------RISLA-GLSLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 431 ~~gI~v~~gg------Ris~~-~~~~~~i~~~~~~l~~~l~~~ 466 (467)
++||++.++| |+... .+++++++++++++.++++++
T Consensus 413 ~~Gvl~~~~~~~~~~l~~~Ppl~it~~eid~~~~~l~~~l~~~ 455 (459)
T PRK06931 413 ENGLLLERGGRNGNVVRLLPPLLITQAECEEFIDRFEQALLAA 455 (459)
T ss_pred HCCcEEeecCCCCCEEEEECCCCcCHHHHHHHHHHHHHHHHHH
Confidence 4699997653 55433 238899999999999998753
No 348
>PRK07480 putative aminotransferase; Validated
Probab=99.30 E-value=4.1e-09 Score=107.76 Aligned_cols=343 Identities=12% Similarity=0.036 Sum_probs=179.2
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCC----cCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeec
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENK----EYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQG 157 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~----~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t 157 (467)
+.+.||+..|..-..-| +-.|.|.+++.+.++..... .| +.....+|-+.+++.+.. .-+++.+ +
T Consensus 49 G~~ylD~~~g~~~~~lG--h~~p~v~~Ai~~q~~~~~~~~~~~~~-~~~~~~~lae~L~~~~p~------~~~~v~f--~ 117 (456)
T PRK07480 49 GNKILDGMAGLWCVNVG--YGRKELADAAARQMRELPYYNTFFKT-THPPAIELAAKLAEVAPP------GFNHVFF--T 117 (456)
T ss_pred CCEEEEccchHHHhcCC--CCCHHHHHHHHHHHHhcCCccccccc-CCHHHHHHHHHHHHhCCC------CcCEEEE--e
Confidence 45789998774311122 23677888888877542111 12 222233444444444211 1247888 9
Q ss_pred CCchhHHHHHHHHHHHhC-----CC-CEEEEcCCCCcchHH-HHhhCCCC------------eEEeeeecCC--CCCCC-
Q 012238 158 LSGTGSLRLAAALIERYF-----PG-AKVLISSPTWGNHKN-IFNDARVP------------WSEYRYYDPK--TVGLD- 215 (467)
Q Consensus 158 ~ggt~al~l~~~~l~~~~-----~g-d~Vlv~~P~y~~~~~-~~~~~G~~------------~~~v~~~~~~--~~~~d- 215 (467)
++|++|.+.+.++..... +| .+|+...-+|..... .+...|.. +..++..... .+..+
T Consensus 118 ~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 197 (456)
T PRK07480 118 NSGSEANDTVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTP 197 (456)
T ss_pred CCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCcccccccCCCh
Confidence 999999999866554431 23 468888888865432 11111111 1111110000 00011
Q ss_pred -------hhhHHHHHHc-CCCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHH
Q 012238 216 -------FEGMIADIKA-APGGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSV 286 (467)
Q Consensus 216 -------~~~l~~~l~~-~~~~~~~i~i~~p~NPTG~~-~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~ 286 (467)
.+.+++.+.. .+.+...+++-..+.-.|.. .+.+.+++|.++|++||+++|+||+..+|.-.+ ..+..
T Consensus 198 ~~~~~~~~~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG---~~~a~ 274 (456)
T PRK07480 198 EEFGLAAARQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRTG---EWFGS 274 (456)
T ss_pred HHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCc---chhhh
Confidence 2555554532 23455566666555556775 566779999999999999999999988874221 11122
Q ss_pred HHHHhcCCeEEEEecCccCcccCCC-ccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhC
Q 012238 287 RLFATRGMELLVAQSYSKNLGLYAE-RIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVG 365 (467)
Q Consensus 287 ~~~~~~~~~~i~~~S~SK~~~~~G~-RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~ 365 (467)
.. ..-.++++ .|+|.++ .|. .+|.++ ..+++.+. +...-.......+.+.++++..++.+.|+
T Consensus 275 ~~-~gv~PDiv---~~gK~l~-gG~~Pi~av~---~~~~i~~~--------~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~ 338 (456)
T PRK07480 275 QH-FGIKPDLM---TIAKGLT-SGYIPMGAVG---VGDRVAEV--------LIEEGGEFNHGFTYSGHPVAAAVALANLR 338 (456)
T ss_pred hh-cCCCCCee---eeehhhc-cCCccceEEE---EcHHHHHH--------HhcCCCCcccCCCCCcCHHHHHHHHHHHH
Confidence 11 12223433 4689988 674 788885 67777665 21100011112233455566666665553
Q ss_pred ChhhHHHHHHHHHHHHHHH-HHHHHHHHHHhhh--ccCCCCCcccccCCcceEEe--cCC--------C----HHHH-HH
Q 012238 366 NPALFDEWKAEMEMMAGRI-KNVRQKLFDSLSA--KDKSGKDWSFILRQIGMFSF--TGL--------N----KAQS-DN 427 (467)
Q Consensus 366 ~~~~~~~~~~~l~~~~~~~-~~~r~~l~~~l~~--~~g~~~~~~~~~~~~g~f~~--~~l--------~----~~~~-~~ 427 (467)
- +.+ +...++. +++-++|.+.|++ +.+. +..+...|.++.+ ..- . ...+ ..
T Consensus 339 ~--l~~------~~l~~~~~~~~g~~l~~~l~~l~~~~~---i~~vrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~ 407 (456)
T PRK07480 339 I--LRD------EGIVERVRDDTGPYLQKRLRELADHPL---VGEVRGVGLVGAIELVKDKATRERFEAGGGVGTICRDH 407 (456)
T ss_pred H--HHh------CCHHHHHHHHHHHHHHHHHHHhhcCCC---eeeEEeecceEEEEEeccccccccCcchhhHHHHHHHH
Confidence 1 110 1222333 2333444444430 2221 1122333333311 110 0 1223 34
Q ss_pred HHHcccEEEeCCC---eEEecc-CChhhHHHHHHHHHHHHHhc
Q 012238 428 MTNKWHVYMTKDG---RISLAG-LSLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 428 ll~~~gI~v~~gg---Ris~~~-~~~~~i~~~~~~l~~~l~~~ 466 (467)
+++ +||++.+.| ||+... ++++++++++++|.++++++
T Consensus 408 ~~~-~Gll~~~~~~~l~~~Ppl~it~~eid~~~~~l~~al~~~ 449 (456)
T PRK07480 408 CFA-NGLIMRAVGDRMIISPPLVITHAEIDELVEKARKALDAT 449 (456)
T ss_pred HHH-CCcEEeecCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 454 699998765 666443 38899999999999998754
No 349
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.26 E-value=1.8e-09 Score=109.41 Aligned_cols=278 Identities=13% Similarity=0.064 Sum_probs=172.5
Q ss_pred CCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHH-hC--C
Q 012238 100 PYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER-YF--P 176 (467)
Q Consensus 100 p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~-~~--~ 176 (467)
+.+++...+++...++.+. .......+..++.+.+..++....+.+-.. -=.+ |.|||+|+.++...... .. .
T Consensus 72 ~~~~~~a~~~~~~~~~~nl-~d~~~~p~a~~~E~~~v~~l~~l~~~~~~~-~G~~--t~GgTean~lal~aar~~~~~~~ 147 (460)
T COG0076 72 TRVPPVAAELLVSALNKNL-GDPDESPAAAELEERVVNMLSDLLGAPEEA-SGTF--TSGGTEANLLALLAARERWRKRA 147 (460)
T ss_pred CCCHHHHHHHHHHHHhhcC-CCcccChhHHHHHHHHHHHHHHHhCCCCCC-ceEE--EcChHHHHHHHHHHHHHHHHHHh
Confidence 3447778888888775542 212222366677777777776555443111 1233 89999999987433322 11 1
Q ss_pred ---CC------EEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCC
Q 012238 177 ---GA------KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPT 247 (467)
Q Consensus 177 ---gd------~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~ 247 (467)
+. +|+++.-.+..+...++.+|.....+++... +..+|++.+++++.+..... +|+-+.++.|||.+
T Consensus 148 ~~~~~~~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~v~~~~~-~~~id~~~l~~~i~~~t~~g-~vV~~aGtT~~G~i-- 223 (460)
T COG0076 148 LAESGKPGGKPNIVCSETAHFSFEKAARYLGLGLRRVPTVPT-DYRIDVDALEEAIDENTIGG-VVVGTAGTTDTGSI-- 223 (460)
T ss_pred hhcccccCCCCeEEecCcchhHHHHHHHHhCCCceeEEeccC-ccccCHHHHHHHHHhhccCc-eEEEEecCCCCCcc--
Confidence 11 6999999999999999999999999999643 78899999999998632221 36667789999984
Q ss_pred HHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecCCHH-HH
Q 012238 248 PEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSD-LA 326 (467)
Q Consensus 248 ~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~-~~ 326 (467)
+.+++|.++|+++++++.+|.||.++..--.+.+.. -......-.=+.-++.|.+. .=...||+. ..+++ +.
T Consensus 224 -Ddi~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~---~~f~l~~vdSIt~d~HK~g~-aP~~~G~il--~rd~e~l~ 296 (460)
T COG0076 224 -DDIEELADIAEEYGIWLHVDAAFGGFLLPFLEPDGR---WDFGLEGVDSITVDGHKYGL-APIGCGVVL--FRDEEALR 296 (460)
T ss_pred -CCHHHHHHHHHHcCCcEEEEccccceeecccCccch---hhcCCCCceEEEECcccccC-CCCCceEEE--EECHHHhh
Confidence 556788888999999999999999887421111111 01111122344567889765 336689986 46664 33
Q ss_pred hhhhhhhHHHHHHHHHhhccCccC---------CCc-----hHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 012238 327 ARCCEVAVIQVKSQLKRLARPMYS---------NPP-----VHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLF 392 (467)
Q Consensus 327 ~~~~~~~~~~~~~~l~~~~~~~~~---------~~~-----~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~ 392 (467)
+. +. ...+... ..+ .+.+.+....|. .+.+.++.++..+..+++.
T Consensus 297 ~~------------~~-~~~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~lG--------~eGy~~l~~~~~~~a~~la 355 (460)
T COG0076 297 RI------------LI-FADYYLPGGGIPNFTILGSRPGRQALALYANLRRLG--------REGYRKLLDRTLELARYLA 355 (460)
T ss_pred hh------------hh-cccccCCCCCcCceeEeeccchHHHHHHHHHHHHhC--------HhHHHHHHHHHHHHHHHHH
Confidence 32 11 1111111 111 112222222222 3446678888888899999
Q ss_pred HHhhhccCCCCCccccc-CCcceEEe
Q 012238 393 DSLSAKDKSGKDWSFIL-RQIGMFSF 417 (467)
Q Consensus 393 ~~l~~~~g~~~~~~~~~-~~~g~f~~ 417 (467)
+.|+ +.|. ++... |.....+|
T Consensus 356 ~~l~-~~~~---~e~~~~p~l~~V~f 377 (460)
T COG0076 356 EELE-KLGD---FELVNEPELPIVAF 377 (460)
T ss_pred HHHH-hCCC---cEeecCCccceEEE
Confidence 9998 7763 45544 44443333
No 350
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.22 E-value=1.1e-08 Score=100.33 Aligned_cols=323 Identities=15% Similarity=0.067 Sum_probs=178.9
Q ss_pred cEEecCcccCCCCCCCCchHHHHHHHHHHHhc-CC-------CCcCCC--CcchHHHHHHHHHHHhCCCCcccccCceee
Q 012238 85 KLNLGVGAYRTEELQPYVLDVVKKAENLMLER-GE-------NKEYLP--IEGLAAFNKVTAELLFGADNSVLKEQRVAT 154 (467)
Q Consensus 85 ~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~-~~-------~~~Y~~--~~G~~~lr~aia~~l~~~~~~~~~~~~i~~ 154 (467)
.+||+.|- ..+|+.|++.+++.+.+ .. .....+ ..-..+.++.+.+++.... ..+|++
T Consensus 5 ~~nF~aGP-------a~lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~~F~~i~~~~~~~Lr~Ll~~P~-----~y~Vlf 72 (364)
T PRK12462 5 QLNFSGGP-------GALPDTVLEQVRQAVVELPETGLSVLGMSHRSSWFSSLLAQAEADLRDLLGIPD-----EYGVVF 72 (364)
T ss_pred cceecCCC-------cCCCHHHHHHHHHHHhcccccCccccccccccHHHHHHHHHHHHHHHHHhCCCC-----CCeEEE
Confidence 57888662 23466777776654422 10 011111 1113344444555543210 124544
Q ss_pred eecCCchhHHHHHHHHHHHhCCCCEEE--EcCCCCc-chHHHHhhCCCCeEEeeeecC--CCCCCChhhHHHHHHcCCCC
Q 012238 155 VQGLSGTGSLRLAAALIERYFPGAKVL--ISSPTWG-NHKNIFNDARVPWSEYRYYDP--KTVGLDFEGMIADIKAAPGG 229 (467)
Q Consensus 155 ~~t~ggt~al~l~~~~l~~~~~gd~Vl--v~~P~y~-~~~~~~~~~G~~~~~v~~~~~--~~~~~d~~~l~~~l~~~~~~ 229 (467)
...|||++++.+ .+.++.+||+++ +.+-.|. .+...++.+| ++..+....+ .+..++++.+ +. .+.
T Consensus 73 -l~GggT~~~ea~--~~Nll~~g~~~~~~~~tG~fg~r~~~ea~~~g-~v~~~~~~~~~~~~~~p~~~~~----~~-~~d 143 (364)
T PRK12462 73 -LQGGSSLQFSMI--PMNFSRPGAAAPEYVTTGYWSRKAIGEASRVA-AMRVVWDGAASGYRTLPSLAEL----DW-DAR 143 (364)
T ss_pred -EeccHHHHHHHH--HHHcCCCCCcEEEEEeCCHHHHHHHHHHHhcC-CceEecCcCCCCCCcCCCHHHh----cc-CCC
Confidence 266799999987 666677999665 4455553 3556677777 5555432111 1234455543 21 134
Q ss_pred cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccC
Q 012238 230 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY 309 (467)
Q Consensus 230 ~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~ 309 (467)
...+.+++-...||+.++ ++.+.++.++|+|.+ +.+.....+.+. -.++..|.-|++|+|
T Consensus 144 ~~~v~~t~NETstGv~~~--------~~~~~~~~llvvD~s-S~~~s~pid~~~-----------~dvi~agsQKnlgP~ 203 (364)
T PRK12462 144 APFRHYVSNETVEGLQFP--------DAAGLPDSPLIADMS-SDFMSRPFDVEA-----------YGMVYAHAQKNLGPA 203 (364)
T ss_pred CcEEEEccCCCCceEecC--------cccccCCCeEEEEcC-chhhCCCCChHH-----------ccEEEeeccccCCCC
Confidence 556777777778899886 223346899999999 555433222211 146677778999988
Q ss_pred CCccceEEEecCCHHHHhhhhh--hhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHH--HHHHHHHHHH
Q 012238 310 AERIGAMNVVCSSSDLAARCCE--VAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKA--EMEMMAGRIK 385 (467)
Q Consensus 310 G~RiG~~~~v~~~~~~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~--~l~~~~~~~~ 385 (467)
|+ +.++ -+++.+++... +.+.++...+++. .++..||.....++..+|+- ..++ .++.+.++.+
T Consensus 204 Gl--tvvi---vs~~al~~~~~~~p~~ldy~~~~~~~--s~~nTPpv~~iy~l~~~l~~-----i~~e~GGl~~~~~r~~ 271 (364)
T PRK12462 204 GV--TVAI---IRRALLERVPDTLPPMLDFRTHVEHR--SNYNTPPVFAIYVMALVLRW-----IRDEIGGVHAMRDINA 271 (364)
T ss_pred ce--EEEE---ECHHHHhhccccCCchhhHHHHHhcC--CCCCCchHHHHHHHHHHHHH-----HHHhccCHHHHHHHHH
Confidence 85 4443 45566654111 2344444433322 22334555554554444321 1123 5788999999
Q ss_pred HHHHHHHHHhhhccC-CCCCccc-cc--CCcceEEecCC-----CHHHHHHHHHcccEEEeCC-----C-eEEecc-CCh
Q 012238 386 NVRQKLFDSLSAKDK-SGKDWSF-IL--RQIGMFSFTGL-----NKAQSDNMTNKWHVYMTKD-----G-RISLAG-LSL 449 (467)
Q Consensus 386 ~~r~~l~~~l~~~~g-~~~~~~~-~~--~~~g~f~~~~l-----~~~~~~~ll~~~gI~v~~g-----g-Ris~~~-~~~ 449 (467)
++.+.+++.+. +.. + +.. .. ...-+-+.+.+ +.+|++.+ +++|+.-..| | |+|+.. ++.
T Consensus 272 ~ka~~ly~~id-~~~~~---~~~~~~~~~RS~mnv~f~~~~~~l~~~f~~~a-~~~gl~~lkGhr~vgg~Ras~yna~~~ 346 (364)
T PRK12462 272 RKAAMLYATLD-ALNEV---IDCHAHRAARSTMNVAFRFRQPRLDTLFKEQS-TEAGFCGLSGHRSIGGIRASLYNAVSE 346 (364)
T ss_pred HHHHHHHHHHH-hCCCc---ccCCCChhhcCcceEEEEcCCHHHHHHHHHHH-HHCCCccccCCcccCceEEEcCCCCCH
Confidence 99999999998 654 2 111 11 11222222222 33445444 4569998887 3 999654 577
Q ss_pred hhHHHHHHHHHHHHHh
Q 012238 450 AKCEYLADAIIDSYHN 465 (467)
Q Consensus 450 ~~i~~~~~~l~~~l~~ 465 (467)
+.++.+++-+++.-++
T Consensus 347 e~v~~L~~fm~~f~~~ 362 (364)
T PRK12462 347 QAVSRLCAFLKDFAIR 362 (364)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 8999888888877554
No 351
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.20 E-value=4.4e-09 Score=106.30 Aligned_cols=172 Identities=17% Similarity=0.078 Sum_probs=121.5
Q ss_pred CcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEe
Q 012238 125 IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEY 204 (467)
Q Consensus 125 ~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v 204 (467)
..-+.+..+..|+.+... ...++ ++|.+.|+..+ +++.+.+||.|+++.+++-+....+-..|+.++++
T Consensus 69 ~G~i~eAqe~aA~~fgAd-------~tyFv--vNGTS~ank~v--i~a~~~~GD~VLvdRN~HKSi~~glilaGa~Pvyl 137 (557)
T COG1982 69 EGPIKEAQELAARVFGAD-------HTYFV--VNGTSTANKAV--INAVLTPGDKVLVDRNCHKSIHHGLILAGATPVYL 137 (557)
T ss_pred CccHHHHHHHHHHHhCCC-------ceEEE--ECCccHHHHHH--HHhhcCCCCEEEecCCccHHHHHHHHHcCCceEEe
Confidence 333566767677774432 34555 79999999987 77788899999999999988888888999999998
Q ss_pred eeecCC----CCCCChhhHHHHHHcCCCCcEEEEeCCCCCCC--CCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCC
Q 012238 205 RYYDPK----TVGLDFEGMIADIKAAPGGSFILLHGCAHNPT--GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGS 278 (467)
Q Consensus 205 ~~~~~~----~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPT--G~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~ 278 (467)
...-.. -++++.+.+.+++.+.+...+++++ .||| |++++.+ +|++.+.++++++.+|++ .+..++.
T Consensus 138 ~p~~np~~gi~ggI~~~~~~~~l~~~~~~~k~~vi---tnpTYdGv~~n~~---~i~~~~~~~~a~v~~dea-h~~~~~~ 210 (557)
T COG1982 138 EPSRNPLYGIIGGIPLETFKEALLAHPDAEKLAVI---TNPTYDGVCYNLR---KIVELLHHYGAWVLYDEA-HPAHFDF 210 (557)
T ss_pred cCCCCccccccCCCCHHHHHHHHHhChhhheeEEE---ecCccceEeecHH---HHHHHHhhcCceEEhhhc-Ccccccc
Confidence 543222 2478999999999876555245554 4777 8888876 666668899999999999 3443331
Q ss_pred CCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEec
Q 012238 279 LDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC 320 (467)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~ 320 (467)
. +..+. .......+++..|..|.++ ++.-+-.+.+.
T Consensus 211 ~--~~l~~--~~~~~~~~~~tqS~HK~l~--alSQaS~iHv~ 246 (557)
T COG1982 211 S--PMLPE--SALNGGADFVTQSTHKLLA--ALSQASMIHVK 246 (557)
T ss_pred c--ccCcc--hhhhcCceEEEechhhhhh--hhhhhHHHhhC
Confidence 1 11111 1223567899999999974 56666665443
No 352
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.20 E-value=3e-08 Score=102.47 Aligned_cols=203 Identities=12% Similarity=0.021 Sum_probs=126.4
Q ss_pred HHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCC-cc--------cccC--ceeeeecCCchhHHHHHHHHHHHh--C-
Q 012238 110 ENLMLERGENKEYLPIEGLAAFNKVTAELLFGADN-SV--------LKEQ--RVATVQGLSGTGSLRLAAALIERY--F- 175 (467)
Q Consensus 110 ~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~-~~--------~~~~--~i~~~~t~ggt~al~l~~~~l~~~--~- 175 (467)
+...++.+. ..|...+...++.+.+.+|+.+..+ .+ -.++ .-++ |.|||+|...+...-... .
T Consensus 110 l~~~lN~n~-~~~~~spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~--tsGGS~ANl~Al~~AR~~~~~~ 186 (522)
T TIGR03799 110 LMVALNQNL-VKIETSKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAF--CSGGTVANITALWVARNRLLKA 186 (522)
T ss_pred HHHHhcCCc-ceeecCcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEE--cCchHHHHHHHHHHHHHHhccc
Confidence 333444432 3444455566777777777644321 00 0111 2244 799999988763222111 0
Q ss_pred ---------------------CCCEEEEcCCCCcchHHHHhhCCC---CeEEeeeecCCCCCCChhhHHHHHHc---CCC
Q 012238 176 ---------------------PGAKVLISSPTWGNHKNIFNDARV---PWSEYRYYDPKTVGLDFEGMIADIKA---APG 228 (467)
Q Consensus 176 ---------------------~gd~Vlv~~P~y~~~~~~~~~~G~---~~~~v~~~~~~~~~~d~~~l~~~l~~---~~~ 228 (467)
++..|++++-.+......++..|. +++.+|++ +++.+|++.|++.+++ ...
T Consensus 187 ~~~~~~~~~~gl~~~~~~~~~~~~~v~~S~~~H~S~~kaa~~lglg~~~v~~vp~d--~~g~~d~~~L~~~i~~~~~~g~ 264 (522)
T TIGR03799 187 DGDFKGVAREGLFAALKHYGYDGLAILVSERGHYSLGKAADVLGIGRDNLIAIKTD--ANNRIDVDALRDKCAELAEQNI 264 (522)
T ss_pred cccccccccccchhhhhhccCCceEEEECCCchHHHHHHHHHcCCCcccEEEEEeC--CCCcCCHHHHHHHHHHHHHCCC
Confidence 134688888888888888898888 78899984 4678999999999863 223
Q ss_pred CcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhc-CCeEEEEecCccCcc
Q 012238 229 GSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR-GMELLVAQSYSKNLG 307 (467)
Q Consensus 229 ~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~S~SK~~~ 307 (467)
+..+++.+..++.||.+-+.+ +|+++|+++|+++++|.+|.+...-. + ..+..... ..-..+..|..|.+.
T Consensus 265 ~~~~vvataGtt~tGaiDpl~---eIa~i~~~~g~~lHVDaA~gg~~~~~---~--~~r~~l~gle~aDSit~d~HK~l~ 336 (522)
T TIGR03799 265 KPLAIVGVAGTTETGNIDPLD---EMADIAQELGCHFHVDAAWGGATLLS---N--TYRHLLKGIERADSVTIDAHKQLY 336 (522)
T ss_pred CcEEEEEEecCcCCCCcCCHH---HHHHHHHHcCCeEEEEchhhhHHHhC---H--HHHHHhcCchhCCEEEEChhhcCC
Confidence 445555567788999988765 66677999999999999987654210 1 11222222 123566888999543
Q ss_pred cCCCccceEEEecCCHHHHhh
Q 012238 308 LYAERIGAMNVVCSSSDLAAR 328 (467)
Q Consensus 308 ~~G~RiG~~~~v~~~~~~~~~ 328 (467)
.| ..+|.++ ..+++..+.
T Consensus 337 ~P-~g~G~ll--vr~~~~~~~ 354 (522)
T TIGR03799 337 VP-MGAGMVL--FKDPALMSA 354 (522)
T ss_pred cC-cccEEEE--EeCHHHHHH
Confidence 23 3367775 355555443
No 353
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.18 E-value=2.6e-08 Score=107.54 Aligned_cols=307 Identities=11% Similarity=0.088 Sum_probs=168.6
Q ss_pred CcCCCC---cchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHh------CCCCEEEEcCCCCcch
Q 012238 120 KEYLPI---EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY------FPGAKVLISSPTWGNH 190 (467)
Q Consensus 120 ~~Y~~~---~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~------~~gd~Vlv~~P~y~~~ 190 (467)
+-|.|. +|..++...+.+|+....|.+ + +.++.+||+.+-....+..... ...++|+++.-.+...
T Consensus 517 hPyqPe~~sqG~lq~i~elq~~l~eltGmd----~-~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtn 591 (939)
T TIGR00461 517 HPFQPSNQVEGYQELIAQLEKWLCSITGFD----A-ISLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTN 591 (939)
T ss_pred CCCCchHHhHHHHHHHHHHHHHHHHHHCCC----C-cccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcC
Confidence 455554 344444444444443333332 2 2233567776655432222221 1235899999888777
Q ss_pred HHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEecc
Q 012238 191 KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVA 270 (467)
Q Consensus 191 ~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Dea 270 (467)
...++..|++++.++++ .++.+|+++|++.+++...+++++++++|+| +|..-+ .+++|+++|+++|.++++|.+
T Consensus 592 Pasa~~~G~~Vv~V~~d--~~G~iDle~L~~~i~~~~~~taaV~iT~pst-~G~~e~--~I~eI~~iah~~G~~v~VDgA 666 (939)
T TIGR00461 592 PASAAMAGMQVVPVNCD--QDGNIDLVDLKNKAEQHGDELAAVMVTYPST-HGVFEP--TIQHACDIVHSFGGQVYLDGA 666 (939)
T ss_pred HHHHHHCCCEEEEeccC--CCCCcCHHHHHHHHhhcCCceEEEEEEeCCc-Cceecc--cHHHHHHHHHHcCCEEEEEec
Confidence 77788999999999983 4678999999999986445888999999999 788644 267888889999999999999
Q ss_pred CCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCccc----CCCccceEEEecCCHHHHhhhhhhh-HHHHHHH--HHh
Q 012238 271 YQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGL----YAERIGAMNVVCSSSDLAARCCEVA-VIQVKSQ--LKR 343 (467)
Q Consensus 271 y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~----~G~RiG~~~~v~~~~~~~~~~~~~~-~~~~~~~--l~~ 343 (467)
+..-... .. .+ ....-.++++|..|.|+. .|-.+|.+. ..+++... -+.. .+.-.+. -..
T Consensus 667 q~~al~~-l~-~P-------g~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~---vr~~L~~~-lPg~~v~~t~d~~greq 733 (939)
T TIGR00461 667 NMNAQVG-LT-SP-------GDLGADVCHLNLHKTFCIPHGGGGPGMGPIG---VKSHLIPF-LPKHDVVSMITGIGGSK 733 (939)
T ss_pred ChhhCCC-CC-Cc-------cccCCCEEEecCCccCCCCCCCCCCCeEEEE---Ehhhchhh-cCCCcccccccCCCCcc
Confidence 6331111 10 00 112345778889996652 233457774 33333332 0000 0000000 000
Q ss_pred hccCc---cCCCchH--HHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccC-Ccce---
Q 012238 344 LARPM---YSNPPVH--GARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR-QIGM--- 414 (467)
Q Consensus 344 ~~~~~---~~~~~~~--~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~-~~g~--- 414 (467)
..+.. ..+.... ...+....|. .+.+++..+..-.+.+++.+.|. + +. +...+ ..+.
T Consensus 734 ~Iga~s~~~~g~a~~~l~a~~yi~~lG--------~~GL~~~a~~ailnAnYl~~rL~-~-~~----~~l~~~~~~~~~h 799 (939)
T TIGR00461 734 SIGSVSAAPYGSASILPISWMYIKMMG--------NEGLPKASVVAILNANYMATRLK-D-HY----PILFVGTLKHVAH 799 (939)
T ss_pred ccccccccccCcHHHHHHHHHHHHHHC--------HHHHHHHHHHHHHHHHHHHHHhh-c-cC----cccccCCCCceeE
Confidence 00000 1111111 1111112222 23356666666677888888887 5 22 22222 1222
Q ss_pred -EEe--c------CCCH-HHHHHHHHcccEEEeC----C-C----eEEeccCChhhHHHHHHHHHHHHHh
Q 012238 415 -FSF--T------GLNK-AQSDNMTNKWHVYMTK----D-G----RISLAGLSLAKCEYLADAIIDSYHN 465 (467)
Q Consensus 415 -f~~--~------~l~~-~~~~~ll~~~gI~v~~----g-g----Ris~~~~~~~~i~~~~~~l~~~l~~ 465 (467)
|++ . +.+. +..++|++ +|+.... . | +.+-.. ++++++++++++.++.++
T Consensus 800 Efv~~~~~~~~~~g~~~~dIakrL~d-~G~hapt~~~pv~g~lmiepTE~e-skeelD~f~~al~~I~~e 867 (939)
T TIGR00461 800 ECILDLRPLKAKTGIEAIDVAKRLQD-YGFHAPTLSFPVPGTLMVEPTESE-SLEELDRFCDAMIAIKEE 867 (939)
T ss_pred EEEEeccchhhhcCCCHHHHHHHHHh-CCeeccccCCccCCeEEEEeeccC-CHHHHHHHHHHHHHHHHH
Confidence 222 1 2333 44566665 5886411 1 3 444444 789999999999777654
No 354
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.17 E-value=5.3e-08 Score=99.17 Aligned_cols=336 Identities=10% Similarity=0.010 Sum_probs=166.2
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHH--HHHHHHHhcCC----CC-cCCCCcchHHHHHHHHHHHhCCCCcccccCceee
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVK--KAENLMLERGE----NK-EYLPIEGLAAFNKVTAELLFGADNSVLKEQRVAT 154 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~--~a~~~~~~~~~----~~-~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~ 154 (467)
+...||+..|.....-|.- .|.|. +++.+.+.... .. .+ ...-..++-+.+++... . . .-+++.+
T Consensus 37 G~~ylD~~~g~~~~~lGh~--~p~v~~~~ai~~q~~~~~~~~~~~~~~-~~~~~~~l~~~l~~~~~-~--~--~~~~v~f 108 (431)
T TIGR03251 37 GRRYLDMFSFFASMALGMN--HPALVDDLAFRARLGAAAVNKPSNSDV-YTVAMARFVDTFARVLG-D--P--ALPHLFF 108 (431)
T ss_pred CCChhhcccChhhcCCCCC--ChhhhHHHHHHHHHHHhhhcccccCCC-CCHHHHHHHHHHHHhcC-C--C--CcCEEEE
Confidence 4578888777542222332 46666 67766654321 00 11 11122233333343320 1 0 1357888
Q ss_pred eecCCchhHHHHHHHHHHHhC------C------CCEEEEcCCCCcchHHHH-hhCCCC-eE----------E--eeee-
Q 012238 155 VQGLSGTGSLRLAAALIERYF------P------GAKVLISSPTWGNHKNIF-NDARVP-WS----------E--YRYY- 207 (467)
Q Consensus 155 ~~t~ggt~al~l~~~~l~~~~------~------gd~Vlv~~P~y~~~~~~~-~~~G~~-~~----------~--v~~~- 207 (467)
+++|++|.+.+.++...+. . +.+|+...-+|.+..... ...|.. .. . .|..
T Consensus 109 --~~sGsEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~ 186 (431)
T TIGR03251 109 --IEGGALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLT 186 (431)
T ss_pred --eCCcHHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCccCCCCccc
Confidence 9999999999866554331 1 368999998886554322 222211 00 0 1100
Q ss_pred ---cCCCCC-------CChhhHHHHHHcCCCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCCeeEEeccCCCCCC
Q 012238 208 ---DPKTVG-------LDFEGMIADIKAAPGGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFAS 276 (467)
Q Consensus 208 ---~~~~~~-------~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~-~~~~~l~~l~~~~~~~~~~li~Deay~~~~~ 276 (467)
+..... -+++.+++.+...+.+...+++...+.-.|.. .+.+.+++|.++|++||+++|+||++.++..
T Consensus 187 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~Gr 266 (431)
T TIGR03251 187 FPLDAPNLDQVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTGVGL 266 (431)
T ss_pred CCccccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhccCc
Confidence 000000 12445555665444566677766666666765 5778899999999999999999999887754
Q ss_pred CCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecCCHHHHhhhhhhhHHHHHH-HHH-hhccCccCCCch
Q 012238 277 GSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKS-QLK-RLARPMYSNPPV 354 (467)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~-~l~-~~~~~~~~~~~~ 354 (467)
.+ ..+... ...-.+++++ ++|.+. . .|++ ++.. +.+. .. .+. ......+.+.+.
T Consensus 267 tG---~~~a~~-~~gv~PDi~~---~gK~~~--~--~g~~---~~~~-i~~~---------~~~~~~~~~~~~~T~~gnp 322 (431)
T TIGR03251 267 TG---TAWAYQ-QLGVQPDIVA---FGKKTQ--V--CGIM---AGRR-VDEV---------ADNVFAVPSRLNSTWGGNL 322 (431)
T ss_pred cc---hHHHHH-hcCCCCCEEE---ecccCc--c--ceEE---ecch-HHHh---------hhhcccCccccCCCCCCCH
Confidence 31 122221 1122334443 578752 1 2444 2432 2111 00 010 000111223444
Q ss_pred HHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC-CCCCcccccCCcceEEecCC-C----HHHHHHH
Q 012238 355 HGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK-SGKDWSFILRQIGMFSFTGL-N----KAQSDNM 428 (467)
Q Consensus 355 ~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g-~~~~~~~~~~~~g~f~~~~l-~----~~~~~~l 428 (467)
++..++...|+- +.+ ...++...+.-+..++.|.+..+ +.+ + .......| .++.+.+ + ..+.+.+
T Consensus 323 l~~aaa~a~L~~--l~~--~~l~~~~~~~g~~l~~~L~~l~~-~~~~~---i~~vrg~G-~~~~i~~~~~~~~~~~~~~l 393 (431)
T TIGR03251 323 VDMVRATRILEI--IEE--ERLVDNARVQGAHLLARLHELAA-EFPHL---VSNPRGRG-LMCAFDLPSTADRDEVIRQL 393 (431)
T ss_pred HHHHHHHHHHHH--HHh--cCHHHHHHHHHHHHHHHHHHHHH-hCccc---eecccccc-eeEEEEeCCHHHHHHHHHHH
Confidence 555555544431 100 01112233333333333333222 232 2 11122333 3333322 1 1345555
Q ss_pred HHcccEEEeCCC----eEEecc-CChhhHHHHHHHHHH
Q 012238 429 TNKWHVYMTKDG----RISLAG-LSLAKCEYLADAIID 461 (467)
Q Consensus 429 l~~~gI~v~~gg----Ris~~~-~~~~~i~~~~~~l~~ 461 (467)
+ ++||++.+.| ||+... .+++++++++++|.+
T Consensus 394 ~-~~Gvl~~~~g~~~lr~~P~l~~t~~eid~~l~~l~~ 430 (431)
T TIGR03251 394 Y-REGVLLLGCGERSIRFRPPLTVTREEIDAAIDAIRR 430 (431)
T ss_pred H-hCCeEEecCCCCeEEEECCccCCHHHHHHHHHHHHh
Confidence 5 4699998865 665432 388999999999876
No 355
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.16 E-value=6.8e-08 Score=98.39 Aligned_cols=337 Identities=14% Similarity=0.087 Sum_probs=171.2
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHH-HhcCC--CCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecC
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLM-LERGE--NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGL 158 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~-~~~~~--~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ 158 (467)
+...||+..|..-..-|. -.|.|.+++.+. ..... ...| ......++-+.+++.+...... .-+++++ ++
T Consensus 57 G~~ylD~~sg~~~~~lGh--~~p~i~~Ai~~q~~~~~l~~~~~~-~~~~~~~la~~l~~~l~~~~p~--~~~~v~f--~~ 129 (464)
T TIGR00699 57 GNRLLDLYSQISSIPIGY--NNPALLKAAQSPEMATTLINRPAL-GNFPSKDWAKILKEGILKVAPK--GQDQVWT--GM 129 (464)
T ss_pred CCEEEEccCCHhhhcCCC--CCHHHHHHHHHHHHHHhhcccccC-CcHHHHHHHHHHHHhHHhhCCC--CcCEEEE--eC
Confidence 457899988865222232 367788888763 22211 1122 1112233444443322211110 1257888 99
Q ss_pred CchhHHHHHHHHHHHhC------------------------CC---CEEEEcCCCCcchHHHHh-hCCCC----------
Q 012238 159 SGTGSLRLAAALIERYF------------------------PG---AKVLISSPTWGNHKNIFN-DARVP---------- 200 (467)
Q Consensus 159 ggt~al~l~~~~l~~~~------------------------~g---d~Vlv~~P~y~~~~~~~~-~~G~~---------- 200 (467)
+|++|.+.+.++..... +| .+|+....+|.+...... ..|..
T Consensus 130 SGsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~~~~~~~~ 209 (464)
T TIGR00699 130 SGSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIHKLDIPAF 209 (464)
T ss_pred CcHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCccccccCCCCC
Confidence 99999999866543321 11 279999999975533222 22211
Q ss_pred -eEEeeeecCC-CC-----------CCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhcCCeeE
Q 012238 201 -WSEYRYYDPK-TV-----------GLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPF 266 (467)
Q Consensus 201 -~~~v~~~~~~-~~-----------~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~-~~~~l~~l~~~~~~~~~~li 266 (467)
+..+|..... .+ .-+++.+++.+++.......+++-..+.-.|... +.+-+++|.++|++||+++|
T Consensus 210 ~~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI 289 (464)
T TIGR00699 210 DWPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFI 289 (464)
T ss_pred CceecCCCCcccccccccccchhHHHHHHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEE
Confidence 1112211000 00 0135667777765444566666666666667766 68889999999999999999
Q ss_pred EeccCCCCCCCCCCCChhHHHHHHhc--CCeEEEEecCccCcccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhh
Q 012238 267 FDVAYQGFASGSLDNDASSVRLFATR--GMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRL 344 (467)
Q Consensus 267 ~Deay~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~ 344 (467)
+||+..+|...+ ..+....+ .- .+++ -.++|.++-. |+++ ..+ .+.. ....
T Consensus 290 ~DEV~tGfGrtG---~~fa~e~~-gv~~~PDi---~t~gK~lg~g----G~~~---~~~-~~~~------------~~~~ 342 (464)
T TIGR00699 290 VDEVQTGVGATG---KFWAHEHW-NLDDPPDM---VTFSKKFQTA----GYFF---HDP-AFRP------------NKPY 342 (464)
T ss_pred EeeeeeCCCCCc---chhHHHhc-CCCCCCCE---EEehhhhccC----Cccc---cch-hccC------------CCCc
Confidence 999987775421 12222111 11 1343 4468988523 4432 332 1111 1111
Q ss_pred ccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC--CCCCccccc--CCcceEEecCC
Q 012238 345 ARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK--SGKDWSFIL--RQIGMFSFTGL 420 (467)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g--~~~~~~~~~--~~~g~f~~~~l 420 (467)
....+...+.++..++.+.|+. +.+ +...++.+++-+++.+.|+ ++. .|..+..+. .. |+++-+.+
T Consensus 343 ~~~~T~~gnp~~~aaa~a~L~~--l~~------~~l~~~~~~~g~~l~~~L~-~l~~~~~~~i~~vRg~G~-Glm~gie~ 412 (464)
T TIGR00699 343 RQFNTWMGDPSRALILREIIQE--IKR------KDLLENVAHVGDYLYTGLE-DLQKKYPEFIQNLRGKGR-GTFIAWDT 412 (464)
T ss_pred ccccCCCCCHHHHHHHHHHHHH--HHh------cCHHHHHHHHHHHHHHHHH-HHHHhCCCceeeecccCe-EEEEEEec
Confidence 1112334444554555444421 100 1223333333444444444 321 110011122 33 33332233
Q ss_pred -C----HHHHHHHHHcccEEEeCCC----eEEec-cCChhhHHHHHHHHHHHH
Q 012238 421 -N----KAQSDNMTNKWHVYMTKDG----RISLA-GLSLAKCEYLADAIIDSY 463 (467)
Q Consensus 421 -~----~~~~~~ll~~~gI~v~~gg----Ris~~-~~~~~~i~~~~~~l~~~l 463 (467)
+ ..+.+.+++ +||++.+.| ||... .+++++++.++++|.+++
T Consensus 413 ~~~~~~~~i~~~~~~-~Gvl~~~~g~~~ir~~Ppl~it~~eid~~~~~l~~~~ 464 (464)
T TIGR00699 413 PDEAKRDKLLKKARN-NGVNIGGCGVKAIRLRPMLVFQKHHADIFLEIISKII 464 (464)
T ss_pred CCHHHHHHHHHHHHH-CCcEEecCCCCeEEEeCCCCCCHHHHHHHHHHHHHhC
Confidence 2 223455555 599998866 66543 248899999999998864
No 356
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.15 E-value=2.2e-09 Score=103.66 Aligned_cols=326 Identities=14% Similarity=0.080 Sum_probs=191.6
Q ss_pred CcEEecCcccCCCCCCC-CchHHHHHHHHHHHhc--CCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCC-
Q 012238 84 KKLNLGVGAYRTEELQP-YVLDVVKKAENLMLER--GENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS- 159 (467)
Q Consensus 84 ~~i~l~~G~~~d~~~~p-~~~~~v~~a~~~~~~~--~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g- 159 (467)
..+||+.=.|+-..... +-.+.+.+++...--. .....-+...-..++.+.+|+++.. ++-+++ ..|
T Consensus 137 ~~lNlgSYNYLGFa~~~g~ca~~~~~~~~kygl~~css~~e~G~~~~hkelE~l~A~f~g~-------e~a~vF--~mGf 207 (519)
T KOG1357|consen 137 RCLNLGSYNYLGFAQSVGPCAEASLKSFDKYGLSRCSSRHEAGTTEEHKELEELVARFLGV-------EDAIVF--SMGF 207 (519)
T ss_pred eeeeecccccccccccCCcCChHHHHHHHHhcccccccchhcccHHHHHHHHHHHHHhcCC-------cceEEE--eccc
Confidence 57888765553211111 1245666666554311 1111122233467888889999654 455655 322
Q ss_pred chhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcC----------CCC
Q 012238 160 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA----------PGG 229 (467)
Q Consensus 160 gt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~----------~~~ 229 (467)
+|.+... -..+.||.-|+--+--+.....-++..|+.++.+.. -|.++||+.+++. +-+
T Consensus 208 ~TNs~~~----p~l~~~gsLIiSDelNHaSi~~GaRLSgAtiRVfkH-------Ndm~~LEr~Lrd~I~~gqP~Thrp~k 276 (519)
T KOG1357|consen 208 ATNSMNI----PSLLGKGSLIISDELNHASLITGARLSGATTRVFRH-------NDMQGLERLLRDAIVYGQPKTHRPWK 276 (519)
T ss_pred cccccCc----ceeecCCcceeeccccchheeccccccCceEEEEec-------CCHHHHHHHHHHHHhcCCCCcCCcch
Confidence 3333332 234668877776667777777778888998888766 3677787777652 123
Q ss_pred cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHH--HhcCCeEEEEecCccCcc
Q 012238 230 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF--ATRGMELLVAQSYSKNLG 307 (467)
Q Consensus 230 ~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~S~SK~~~ 307 (467)
..+++.-.--.--|.+. .+.+++.++|+|..+++.||+++.-+.+. ..-.+..+ .+..+..|..+.|+|.+|
T Consensus 277 ki~iivegiysmEg~iv---~Lp~vvalkkkykayl~lDEAHSiGA~g~---tGrgvce~~g~d~~dvDImMGtftKSfg 350 (519)
T KOG1357|consen 277 KILICVEGIYSMEGTIV---DLPEVVALKKKYKAYLYLDEAHSIGAMGA---TGRGVCEYFGVDPEDVDIMMGTFTKSFG 350 (519)
T ss_pred heeeeeccceeccCeec---ccHHHHHhhccccEEEEeeccccccccCC---CCcceeeccCCCchhheeecceehhhcc
Confidence 33444332222334433 46678888999999999999976544331 11111122 123456788999999999
Q ss_pred cCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccC---ccCCCchHHHHHHHHH--hCChhhHHHHHHHHHHHHH
Q 012238 308 LYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARP---MYSNPPVHGARIVANV--VGNPALFDEWKAEMEMMAG 382 (467)
Q Consensus 308 ~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~~~~~--L~~~~~~~~~~~~l~~~~~ 382 (467)
..| ||+ .+++++++. ++..... ..+.+|.+.|+....+ +....- ....++..+
T Consensus 351 a~G---Gyi---agsk~lid~------------lrt~s~~~~yat~~sppvaqq~~ssl~~i~G~dg----t~~g~~k~~ 408 (519)
T KOG1357|consen 351 AAG---GYI---AGSKELIDY------------LRTPSPSALYATSLSPPVAQQILTSVKHIMGEDG----TNRGRQKIE 408 (519)
T ss_pred ccc---cee---cCcHHHHhh------------hccCCCceeecccCChHHHHHHHHHHHhhcCCCc----ccHHHHHHH
Confidence 887 888 489988886 4332221 1234555566554432 111111 233567888
Q ss_pred HHHHHHHHHHHHhhhccCCCCCcccccCCcc----eEEec-CCCHHHHHHHHHcccEEEeCCC-----------eEEecc
Q 012238 383 RIKNVRQKLFDSLSAKDKSGKDWSFILRQIG----MFSFT-GLNKAQSDNMTNKWHVYMTKDG-----------RISLAG 446 (467)
Q Consensus 383 ~~~~~r~~l~~~l~~~~g~~~~~~~~~~~~g----~f~~~-~l~~~~~~~ll~~~gI~v~~gg-----------Ris~~~ 446 (467)
++++++.+++..++ ..|+ .+...+.. +.++. .....+.++++++ +|.++-.| |++.+.
T Consensus 409 ~l~~ns~yfr~~l~-~~gf----ivyG~~dSpVvplll~~~~k~~~f~r~~l~~-nigvVvvgfPatpl~e~r~R~c~Sa 482 (519)
T KOG1357|consen 409 RLAENSRYFRWELQ-KMGF----IVYGNNDSPVVPLLLYGPAKIVAFSREMLER-NIGVVVVGFPATPLLESRARFCLSA 482 (519)
T ss_pred HHHhhhHHHHHhhh-cCcE----EEecCCCCCcceeeecCcccccHHHHHHHhc-CceEEEEeCCCchHHHhHHHhhhcc
Confidence 89999999999998 7763 44433333 11111 2235666677765 66555443 777654
Q ss_pred -CChhhHHHHHHHHHHHH
Q 012238 447 -LSLAKCEYLADAIIDSY 463 (467)
Q Consensus 447 -~~~~~i~~~~~~l~~~l 463 (467)
.+.|+++++++.+.++=
T Consensus 483 ~ht~e~ld~~l~~i~~~g 500 (519)
T KOG1357|consen 483 SHTKEDLDRALEVIDRVG 500 (519)
T ss_pred cccHHHHHHHHHHHhhhc
Confidence 36789999998887653
No 357
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.14 E-value=5e-08 Score=96.76 Aligned_cols=343 Identities=11% Similarity=0.036 Sum_probs=179.2
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCC---CCcc--hHHHHHHHHHHHhCCCCcccccCceeeee
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYL---PIEG--LAAFNKVTAELLFGADNSVLKEQRVATVQ 156 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~---~~~G--~~~lr~aia~~l~~~~~~~~~~~~i~~~~ 156 (467)
+.+.||-..|..-..-|. -.+.+.+|+.+-++. ..|. ...+ ..+|-+.+++..-.. +=++|++
T Consensus 43 G~r~lDg~sg~W~~~~Gh--~~~~i~~Ai~~Q~~~---l~~~~~~~~t~~Pa~~LA~~L~~~aP~~-----~l~~vFf-- 110 (449)
T COG0161 43 GRRYLDGMSGLWCVNHGH--GRPEIAEAIKKQLDK---LPHVMFGGFTHEPAIELAEKLAELAPEG-----GLDHVFF-- 110 (449)
T ss_pred CCEEEecccHHHHhhcCc--CCHHHHHHHHHHHHh---CCchhhcccCCchHHHHHHHHHHhCCCC-----CccEEEE--
Confidence 346777777755333333 367788888777654 1121 1122 445555666663211 0358999
Q ss_pred cCCchhHHHHHHHHHHHhC-----CCC-EEEEcCCCCcchHH-HHhhCC-------------CCeEEeeeec----C--C
Q 012238 157 GLSGTGSLRLAAALIERYF-----PGA-KVLISSPTWGNHKN-IFNDAR-------------VPWSEYRYYD----P--K 210 (467)
Q Consensus 157 t~ggt~al~l~~~~l~~~~-----~gd-~Vlv~~P~y~~~~~-~~~~~G-------------~~~~~v~~~~----~--~ 210 (467)
+.||++|.+.+.++..... |.. +++.-..+|.+-.- .+...| ..+..+|... . .
T Consensus 111 ~~sGSeAvEtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~~~~~ 190 (449)
T COG0161 111 TDSGSEAVETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFG 190 (449)
T ss_pred eCCchHHHHHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCCcccccCCCC
Confidence 9999999999865543322 322 47777888853211 111111 1122222210 0 0
Q ss_pred CCC----CChhhHHHHHHcCC-CCcEEEEeCCCCCC-CCCCC-CHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCCh
Q 012238 211 TVG----LDFEGMIADIKAAP-GGSFILLHGCAHNP-TGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDA 283 (467)
Q Consensus 211 ~~~----~d~~~l~~~l~~~~-~~~~~i~i~~p~NP-TG~~~-~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~ 283 (467)
.+. -..++|++.+.+.. +....++.-.-.-- +|..+ ++.-|+++.++|++||+++|.||+-.+|.-.+ ..
T Consensus 191 ~~~~~~~~~a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tGFGRTG---~~ 267 (449)
T COG0161 191 EGDEEFAEAADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGFGRTG---KM 267 (449)
T ss_pred CChHHHHHHHHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecceeCCCcCc---hh
Confidence 111 23567777777654 44445554443333 66654 55679999999999999999999987876432 11
Q ss_pred hHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecCCHHHHhhhhhhhHHHHHHH-HHhhccCccCCCchHHHHHHHH
Q 012238 284 SSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQ-LKRLARPMYSNPPVHGARIVAN 362 (467)
Q Consensus 284 ~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~ 362 (467)
... ....-.++++. ++|.+.-.=+.+|.++ ...++.+. +.+. ........+.+.++++.+++.+
T Consensus 268 FA~-e~~gi~PDi~~---~aKGLT~GY~Pl~a~l---~~~~I~~~--------~~~~~~~~f~HG~TYsghPlacAaAla 332 (449)
T COG0161 268 FAC-EHAGIVPDILC---LAKGLTGGYLPLSAVL---TSDRIYEA--------FSDGDAGAFMHGHTYSGNPLACAAALA 332 (449)
T ss_pred hhh-hhcCCCCCeee---ecccccccchhhHhHh---hhHHHHHH--------HhcccCCeeccCCccccCHHHHHHHHH
Confidence 111 11112234443 3576542224455553 44555555 3322 1111122223444555455443
Q ss_pred HhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-cC-CCCCcccccCCcceEEec----CCC---------HHHHHH
Q 012238 363 VVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAK-DK-SGKDWSFILRQIGMFSFT----GLN---------KAQSDN 427 (467)
Q Consensus 363 ~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~-~g-~~~~~~~~~~~~g~f~~~----~l~---------~~~~~~ 427 (467)
.| ++.+ -+...++.++.-.++.+.|+ . +. .|. +--+. .-|+..-+ +.. ...+..
T Consensus 333 ~L---~i~e-----~e~l~~~~~~~~~~l~~~L~-~~l~~~p~-VgdVR-~~Gli~~iElv~d~~t~~~f~~~~~~~~~~ 401 (449)
T COG0161 333 NL---DILE-----EEDLLERVAEIGAYLQAGLQ-AALADHPL-VGDVR-GLGLIGAIELVADKATKTPFEARVGARVRA 401 (449)
T ss_pred HH---HHHH-----hcCHHHHHHHHHHHHHHHHH-HhcccCCc-EEEee-ccceEEEEEEecccccccchhhhHHHHHHH
Confidence 33 2221 12444555556666666666 4 21 111 11111 22333221 111 223444
Q ss_pred HHHcccEEEeCCC-eEEec---cCChhhHHHHHHHHHHHHHh
Q 012238 428 MTNKWHVYMTKDG-RISLA---GLSLAKCEYLADAIIDSYHN 465 (467)
Q Consensus 428 ll~~~gI~v~~gg-Ris~~---~~~~~~i~~~~~~l~~~l~~ 465 (467)
...++|++++|.| -|-++ .+++++++++++++.+++++
T Consensus 402 ~~~e~Gl~iRp~g~~i~~~PPliit~~eid~l~~~l~~al~~ 443 (449)
T COG0161 402 AALERGLLIRPLGDVIYLMPPLIITREEIDELVDALREALDE 443 (449)
T ss_pred HHHHCCeEEeecCCEEEEcCCccCCHHHHHHHHHHHHHHHHH
Confidence 4545699999998 44443 24889999999999999875
No 358
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.13 E-value=3.8e-08 Score=97.25 Aligned_cols=319 Identities=11% Similarity=0.058 Sum_probs=183.0
Q ss_pred hHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhC-CCCEEE
Q 012238 103 LDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF-PGAKVL 181 (467)
Q Consensus 103 ~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~-~gd~Vl 181 (467)
.+...+++.. + +..|.......+|.+.+++++... .++. |..|.++-.++ +...+. |||.++
T Consensus 56 S~~m~aAM~~----G-DD~Y~gdpSv~~Lee~vael~G~E--------~alp--thqGRgaE~Il--~~~~~~~~g~e~g 118 (467)
T TIGR02617 56 TQSMQAAMMR----G-DEAYSGSRSYYALAESVKNIFGYQ--------YTIP--THQGRGAEQIY--IPVLIKKREQEKG 118 (467)
T ss_pred CHHHHHHHHc----C-CcccccCchHHHHHHHHHHHhCCc--------eEEE--CCCCchHHHHH--HHhhccccccccc
Confidence 6777777764 3 356888888899999999996443 4555 88888888886 333455 677776
Q ss_pred EcCC-------C-CcchHHHHhhCCCCeEEeeee--------cCCCCCCChhhHHHHHHcCC-CCcEEEEeCCCCCC-CC
Q 012238 182 ISSP-------T-WGNHKNIFNDARVPWSEYRYY--------DPKTVGLDFEGMIADIKAAP-GGSFILLHGCAHNP-TG 243 (467)
Q Consensus 182 v~~P-------~-y~~~~~~~~~~G~~~~~v~~~--------~~~~~~~d~~~l~~~l~~~~-~~~~~i~i~~p~NP-TG 243 (467)
+..+ . |......+...|+.++.++.. .+..+.+|++.+++.+++.. .+...+...--||- -|
T Consensus 119 ~~~~~~~v~hn~~fett~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~~~i~~v~~tlt~N~~GG 198 (467)
T TIGR02617 119 LDRSKMVAFSNYFFDTTQGHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITCNSAGG 198 (467)
T ss_pred ccccccccceEEEEecchHHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCCCCceeeeeeEEEecCCC
Confidence 4443 2 222344667889888776432 23356799999999998531 11111111111343 48
Q ss_pred CCCCHHHHHHHHHHHHhcCCeeEEeccCCCC-CC----CCCCCChhHHHHHHhc--CCeEEEEecCccCcccCCCccceE
Q 012238 244 IDPTPEQWEKIADVIQEKNHIPFFDVAYQGF-AS----GSLDNDASSVRLFATR--GMELLVAQSYSKNLGLYAERIGAM 316 (467)
Q Consensus 244 ~~~~~~~l~~l~~~~~~~~~~li~Deay~~~-~~----~~~~~~~~~~~~~~~~--~~~~i~~~S~SK~~~~~G~RiG~~ 316 (467)
..+|.+.++++.++|++||+.++.|.+-..- ++ .+......+++.++.. ..-..+..|+||.++.| +|.+
T Consensus 199 qpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDsvt~slsKglgAp---vGg~ 275 (467)
T TIGR02617 199 QPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYADMLAMSAKKDAMVP---MGGL 275 (467)
T ss_pred EEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCEEEEEcCCCCCCc---ccce
Confidence 8999999999999999999999999873210 11 0000111233333211 12345678999999866 5665
Q ss_pred EEecCCHHHHhhhhhhhHHHHHHHHHhhcc-----CccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHH
Q 012238 317 NVVCSSSDLAARCCEVAVIQVKSQLKRLAR-----PMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKL 391 (467)
Q Consensus 317 ~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~-----~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l 391 (467)
+ +..++++.+. ..+++...- ..+.+.+.-...+++.-|.+. ..+. .++... ..-++|
T Consensus 276 L-ag~d~~~~~l---------~~~~~~~~i~~EGf~tYGGlagrd~ea~a~Gl~e~-~~~~---yl~~ri----~qv~yl 337 (467)
T TIGR02617 276 L-CFKDDSFFDV---------YTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDG-MNLD---WLAYRI----NQVQYL 337 (467)
T ss_pred E-EecchhHHHH---------HHHHHhhcccccCCcCcCchhHHHHHHHHhhhhhc-ccHH---HHHHHH----HHHHHH
Confidence 4 1334422221 111332211 123344444444444333322 2111 122222 234677
Q ss_pred HHHhhhccCCCCCcccccCCcceEEecC-------CC------HHHHHHHHHcccEEEeCC-----------C-------
Q 012238 392 FDSLSAKDKSGKDWSFILRQIGMFSFTG-------LN------KAQSDNMTNKWHVYMTKD-----------G------- 440 (467)
Q Consensus 392 ~~~l~~~~g~~~~~~~~~~~~g~f~~~~-------l~------~~~~~~ll~~~gI~v~~g-----------g------- 440 (467)
.+.|. +.|+| +.. .||--+|++ +. ..++.+|-.+.||-...- |
T Consensus 338 ~~~L~-~~Gvp----i~~-~Gghav~iDa~~~lphip~~~fpa~al~~~ly~~~GiR~~e~G~~~~~rd~~~~~~~~~~~ 411 (467)
T TIGR02617 338 VNGLE-EIGVV----CQQ-AGGHAAFVDAGKLLPHIPADQFPAHALACELYKVAGIRAVEIGSLLLGRDPKTGKQLPCPA 411 (467)
T ss_pred HHHHH-hCCCc----EEe-cCccEEEEehhhhCCCCChhhCcHHHHHHHHHHHcCcceEeecceecccCCCCCccCCCcc
Confidence 78888 88863 344 555445442 21 234445555667743221 1
Q ss_pred ---eEEecc--CChhhHHHHHHHHHHHHHh
Q 012238 441 ---RISLAG--LSLAKCEYLADAIIDSYHN 465 (467)
Q Consensus 441 ---Ris~~~--~~~~~i~~~~~~l~~~l~~ 465 (467)
|+++.. .+.+++++++++|..+.++
T Consensus 412 el~RlaipRrvyt~~h~d~v~~~~~~~~~~ 441 (467)
T TIGR02617 412 ELLRLTIPRATYTQTHMDFIIEAFKHVKEN 441 (467)
T ss_pred ceeeeccccccccHhHHHHHHHHHHHHHhh
Confidence 887753 4778999999999988764
No 359
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.11 E-value=3.7e-08 Score=108.07 Aligned_cols=298 Identities=12% Similarity=0.082 Sum_probs=163.4
Q ss_pred cchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHH--hCCCC----EEEEcCCCCcchHHHHhhCCC
Q 012238 126 EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER--YFPGA----KVLISSPTWGNHKNIFNDARV 199 (467)
Q Consensus 126 ~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~--~~~gd----~Vlv~~P~y~~~~~~~~~~G~ 199 (467)
+|..++...+.+++....|. +++.+ +.+||+++.......... ..+|+ +|+++...+......+...|+
T Consensus 538 qG~l~~i~e~q~~l~eltG~----d~~sl-~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~sa~~~G~ 612 (954)
T PRK05367 538 AGYRELIDQLEAWLAEITGY----DAVSL-QPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPASAVMAGM 612 (954)
T ss_pred HHHHHHHHHHHHHHHHHHCC----CCEEE-CccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHHHHHHCCC
Confidence 34444444444444433332 24444 255666666443222222 23565 699999999877788899999
Q ss_pred CeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCC
Q 012238 200 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 279 (467)
Q Consensus 200 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~ 279 (467)
+++.++++ .++.+|++.|++.+++...+..++++++|++-.+.. +.+++|+++|+++|+++++|.++..-..+ .
T Consensus 613 ~vv~v~~d--~~G~iD~~~L~~~i~~~~~~la~V~it~pst~G~~e---~~I~eI~~i~h~~G~~v~VDgA~~~al~~-l 686 (954)
T PRK05367 613 KVVVVACD--ENGNIDLDDLRAKAEEHADNLAAIMITYPSTHGVFE---ETIREICEIVHEHGGQVYLDGANMNAQVG-L 686 (954)
T ss_pred EEEEECCC--CCCCcCHHHHHHHHhccCCCeEEEEEEcCCCCeeec---CCHHHHHHHHHHcCCEEEEECcChhhccC-C
Confidence 99999984 356899999999997543466777777766543222 34678888899999999999996422111 1
Q ss_pred CCChhHHHHHHhcCCeEEEEecCccCcccC----CCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhc-----c---C
Q 012238 280 DNDASSVRLFATRGMELLVAQSYSKNLGLY----AERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLA-----R---P 347 (467)
Q Consensus 280 ~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~----G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~-----~---~ 347 (467)
..+ .+.+ -.++..|..|.|+.| |-.+|.+. ..+.+... +.... . .
T Consensus 687 --~~p-----g~~G-ADi~~~s~HK~f~~P~G~GGPg~G~l~---vr~~l~p~------------lpg~~v~~~~~~~~~ 743 (954)
T PRK05367 687 --ARP-----GDIG-ADVSHLNLHKTFCIPHGGGGPGVGPIG---VKAHLAPF------------LPGHPVQIAGGETGI 743 (954)
T ss_pred --CCh-----hhcC-CCEEEecCcccCCCCcCCCCCceEEEe---eccccccc------------CCCCccCcCCCCCCc
Confidence 100 0122 346788899987533 22356774 22222222 11100 0 0
Q ss_pred ccCCCchHHHHHHHH-HhCChhhHH-HHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccC-----CcceEEec--
Q 012238 348 MYSNPPVHGARIVAN-VVGNPALFD-EWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR-----QIGMFSFT-- 418 (467)
Q Consensus 348 ~~~~~~~~~~~~~~~-~L~~~~~~~-~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~-----~~g~f~~~-- 418 (467)
.......+++..... +. .+.. .=.+.+++..++.-.+.+++.+.|++.++ +.+..+ ...+|-+.
T Consensus 744 g~v~ta~~g~al~~~~a~---~yi~~~G~~Glr~~a~~~~~~A~Yl~~~L~~~~~----~~~~~~~~~~~~e~i~~~~~~ 816 (954)
T PRK05367 744 GAVSAAPFGSASILPISW---MYIRMMGAEGLRQATEVAILNANYIAKRLKDHYP----VLYTGANGRVAHECILDLRPL 816 (954)
T ss_pred CcchhHHHHHHHHHHHHH---HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhhcC----ccccCCCCCcccceEEEeecc
Confidence 011112222211110 00 0000 00233556666556778888888872222 122111 12223332
Q ss_pred ----CCCHHH-HHHHHHcccEEEeC-----CC--eEEeccC-ChhhHHHHHHHHHHHHHh
Q 012238 419 ----GLNKAQ-SDNMTNKWHVYMTK-----DG--RISLAGL-SLAKCEYLADAIIDSYHN 465 (467)
Q Consensus 419 ----~l~~~~-~~~ll~~~gI~v~~-----gg--Ris~~~~-~~~~i~~~~~~l~~~l~~ 465 (467)
+.+.+. .++| .++|+.... .| ||+.+.. +++++++++++++.+..+
T Consensus 817 ~~~~g~~~~di~krL-~d~G~~~~t~~~pv~~~l~i~ptE~~s~~elDr~~~al~~i~~e 875 (954)
T PRK05367 817 KESTGITVDDIAKRL-IDYGFHAPTMSFPVAGTLMVEPTESESKAELDRFCDAMIAIRAE 875 (954)
T ss_pred cccCCCCHHHHHHHH-HHCCCeEeecCCccCCEEEEEeeecCCHHHHHHHHHHHHHHHHH
Confidence 233344 4455 556886532 23 7766532 779999999999887664
No 360
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.10 E-value=5.1e-08 Score=104.78 Aligned_cols=171 Identities=17% Similarity=0.091 Sum_probs=108.4
Q ss_pred CcCCC---CcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHh--CC----CCEEEEcCCCCcch
Q 012238 120 KEYLP---IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY--FP----GAKVLISSPTWGNH 190 (467)
Q Consensus 120 ~~Y~~---~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~--~~----gd~Vlv~~P~y~~~ 190 (467)
+-|.| .+|.-++...+.+++....|. ..+.++-++|+.+-..+.+.+... .+ .++|+++.-.+...
T Consensus 530 hPyqp~e~sQG~lq~i~elq~~l~eLtGm-----d~~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtN 604 (954)
T PRK12566 530 HPFAPREQAEGYRAMIDELEAWLCAITGF-----DAICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTN 604 (954)
T ss_pred CCCCchhhhcCHHHHHHHHHHHHHHHHCC-----CeEeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccC
Confidence 55666 567554444444444333222 222344567776665543333332 12 35788888777555
Q ss_pred HHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEecc
Q 012238 191 KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVA 270 (467)
Q Consensus 191 ~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Dea 270 (467)
...+...|++++.++.+ .++.+|+++|++.+++..+++.++.+.+|++=. ++ .+.+++|+++++++|.++++|.+
T Consensus 605 pasa~~~GieVv~Vp~D--~~G~iDle~L~a~I~~~~~~laaVmiT~Pnt~G--v~-e~~V~eI~~iah~~Galv~vDgA 679 (954)
T PRK12566 605 PASAQMAGMRVVIVECD--PDGNVDLDDLKAKAAAAGDRLSCLMITYPSTHG--VY-EEGIREICEVVHQHGGQVYMDGA 679 (954)
T ss_pred HHHHHHCCCEEEEeccC--CCCCcCHHHHHHHhhccCCCEEEEEEEecCcCc--ee-cchHHHHHHHHHHcCCEEEEEee
Confidence 55677889999999984 356899999999998555677777777666443 33 45688999999999999999999
Q ss_pred CCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccC
Q 012238 271 YQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY 309 (467)
Q Consensus 271 y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~ 309 (467)
.. ...... +.+ ....-.++.++..|+|+.|
T Consensus 680 ~~-~a~~~l--~~P------g~~GADi~~~s~HKtf~~P 709 (954)
T PRK12566 680 NL-NAQVGL--ARP------ADIGADVSHMNLHKTFCIP 709 (954)
T ss_pred Ch-hhccCC--CCh------hhcCCCEEEecCCcccCcC
Confidence 43 222211 110 1123467889999988633
No 361
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.10 E-value=2.3e-07 Score=89.10 Aligned_cols=340 Identities=13% Similarity=0.064 Sum_probs=193.4
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcC-CC-CcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCC
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-EN-KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 159 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~-~~-~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g 159 (467)
+.+.||+..|.-...-+. ..|++.+++.+-.... +. ..|.... .-++.+.+.+.+... ..++|.+ +++
T Consensus 55 g~EyiD~~ssw~~~~~Gh--anpev~ral~~q~~k~~hs~~~~~t~e-av~l~~~l~~~~~~~-----~~~rvff--~ns 124 (433)
T KOG1401|consen 55 GKEYIDFTSSWAVTILGH--ANPEVARALAEQAKKLGHSSNGYFTLE-AVELEEVLSAVLGKG-----SAERVFF--CNS 124 (433)
T ss_pred cceeeeeccceeccccCC--CCHHHHHHHHHHHhhheeccCccccHH-HHHHHHHHHhcccCC-----CccEEEE--ecC
Confidence 357899988865332233 3677888877765432 11 2222221 223334444443221 3789999 999
Q ss_pred chhHHHHHHHHHHHhC----CCC--EEEEcCCCCcchHH-HHhhCCCCeEEeeeec---CC--CCCCChhhHHHHHHcCC
Q 012238 160 GTGSLRLAAALIERYF----PGA--KVLISSPTWGNHKN-IFNDARVPWSEYRYYD---PK--TVGLDFEGMIADIKAAP 227 (467)
Q Consensus 160 gt~al~l~~~~l~~~~----~gd--~Vlv~~P~y~~~~~-~~~~~G~~~~~v~~~~---~~--~~~~d~~~l~~~l~~~~ 227 (467)
||+|.+.+..+-.... +-+ +++....+|..... .+...+.....+|.++ +- ..--|...+++.++.+.
T Consensus 125 GTeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~v~~~~ynd~t~l~k~~~~h~ 204 (433)
T KOG1401|consen 125 GTEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPDVVTAEYNDSTALEKLFESHK 204 (433)
T ss_pred CcHHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhhcccccCCCCCCCCCceeecccCCHHHHHHHHHhCC
Confidence 9999999855543332 112 48888888865433 3333333333332211 00 11247899999998765
Q ss_pred CCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCc
Q 012238 228 GGSFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL 306 (467)
Q Consensus 228 ~~~~~i~i~~p~NPTG~~~-~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~ 306 (467)
.....+++-.-+--.|..+ +++-+..|.+.|+++|+++|.||+.-+|.--+ ..|....+ .-.+++ ..+.|.+
T Consensus 205 ~~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g---~~~a~e~~-~~~PDI---~t~aK~L 277 (433)
T KOG1401|consen 205 GEIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLG---YGWAQEYF-GVTPDI---TTVAKPL 277 (433)
T ss_pred CceEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccc---hHHHHHHh-CcCCcc---eeehhhc
Confidence 4456666665555556544 67889999999999999999999987765321 23333222 233343 3567999
Q ss_pred ccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhcc---CccCCCchHHHHHHHHHhC---ChhhHHHHHHHHHHH
Q 012238 307 GLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLAR---PMYSNPPVHGARIVANVVG---NPALFDEWKAEMEMM 380 (467)
Q Consensus 307 ~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~~~~~~~L~---~~~~~~~~~~~l~~~ 380 (467)
+ .|+.+|... .+.++.+. +..-.. ..+.+.++++..++...|+ +++ | +.+.
T Consensus 278 ~-gGlPigA~~---v~~kV~~~------------i~~~~~l~hg~Tf~gnpLacsa~~~~l~~l~~~e----~---~k~v 334 (433)
T KOG1401|consen 278 G-GGLPIGATG---VRDKVAEM------------ISPGDHLYHGGTFSGNPLACSAGIKVLDELKDPE----T---LKNV 334 (433)
T ss_pred c-CCceeEEEe---ehHHHHhh------------cCCCCccccCcccCCChhhhhHHHHHHHHHcCHH----H---HHHH
Confidence 8 899999985 66666665 322111 2233455566666655543 332 2 3445
Q ss_pred HHHHHHHHHHHHHHhhhccCCCCCcccccCCcceEEec----CC----C--H---HH----HHHHHHcccEEEeCCCeEE
Q 012238 381 AGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFT----GL----N--K---AQ----SDNMTNKWHVYMTKDGRIS 443 (467)
Q Consensus 381 ~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~~~g~f~~~----~l----~--~---~~----~~~ll~~~gI~v~~ggRis 443 (467)
.+.-+..|+.+.+.+. +.+- ...-. -..++++.. .+ + . .+ ...+++ .|+++.|-+-++
T Consensus 335 s~~~k~L~~~l~e~~~-~~~~--~i~g~-~grgl~ig~~~~~p~~~~~d~~~~~~ll~~~~~~~~~~-~gv~i~P~~~l~ 409 (433)
T KOG1401|consen 335 SKIGKELRKLLDEYLK-KTPN--SICGG-VGRGLVIGFEFEGPVYKFADAAREQGLLILTLGKGLLE-EGVRIAPIYLLT 409 (433)
T ss_pred HHHHHHHHHHHHHHhc-cCCC--ceeee-eeeEEEEEEEEeechhhhhhhhhhhhHHHHHHhccccc-ceEEEecccccc
Confidence 5555566777777776 4321 11111 122333221 11 1 1 11 222333 377777743334
Q ss_pred eccCChhhHHHHHHHHHHHHHhcC
Q 012238 444 LAGLSLAKCEYLADAIIDSYHNVS 467 (467)
Q Consensus 444 ~~~~~~~~i~~~~~~l~~~l~~~~ 467 (467)
..+ ++|.++++++++.+.+..++
T Consensus 410 ~~~-~~E~i~~~l~i~~~~l~~~~ 432 (433)
T KOG1401|consen 410 VEH-TPEVIQRLLTILEKVLSALN 432 (433)
T ss_pred ccC-cHHHHHHHHHHHHHHHHHhc
Confidence 444 57899999999999887764
No 362
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.07 E-value=2.2e-08 Score=95.12 Aligned_cols=194 Identities=22% Similarity=0.265 Sum_probs=118.7
Q ss_pred HHHHHHHHHHH-hc---CCCCcCC-CCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCC
Q 012238 104 DVVKKAENLML-ER---GENKEYL-PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGA 178 (467)
Q Consensus 104 ~~v~~a~~~~~-~~---~~~~~Y~-~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd 178 (467)
..|++|+++.- .. ....+|+ ...|-+.+.+..|+.+.. ++-++=.|..+||+|+.++ ++..+.|||
T Consensus 27 ~KVL~Af~~~~vs~~hf~~tTGYGY~D~GRd~le~iyA~vfga-------E~ALVRpq~vSGTHAi~~~--Lfg~LrpGD 97 (403)
T PF06838_consen 27 LKVLKAFQENRVSDSHFAGTTGYGYDDIGRDKLERIYADVFGA-------EDALVRPQFVSGTHAIALA--LFGVLRPGD 97 (403)
T ss_dssp HHHHHHHHHTT--GGGCS---TT-TT-HHHHHHHHHHHHHCT--------SEEEEETTS-SHHHHHHHH--HHHH--TT-
T ss_pred HHHHHHHHHcCCChhhcCCCCcCCCCCccHHHHHHHHHHHhCc-------hhhhhcccccchHHHHHHH--HHhcCCCCC
Confidence 45666665532 11 1123443 345666677777777543 3344445568999999998 778899999
Q ss_pred EEEEcC-CCCcchHHH----------HhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCC---
Q 012238 179 KVLISS-PTWGNHKNI----------FNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGI--- 244 (467)
Q Consensus 179 ~Vlv~~-P~y~~~~~~----------~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~--- 244 (467)
+.+... .=|...... ++.+|+....+++. +++.+|++.++++++ ++++++++ +-.+|.
T Consensus 98 ~ll~~tG~PYDTL~~VIG~~g~~~GSL~e~Gi~Y~~v~L~--~dg~~D~~~i~~~~~---~~tk~v~I---QRSrGYs~R 169 (403)
T PF06838_consen 98 ELLSITGKPYDTLEEVIGIRGNGPGSLKEFGIKYREVPLT--EDGTIDWEAIKKALK---PNTKMVLI---QRSRGYSWR 169 (403)
T ss_dssp EEEESSSS--CCHHHHHTSSSSSSSSTGGGT-EEEE--B---TTSSB-HHHHHHHHH---TTEEEEEE---E-S-TTSSS
T ss_pred eEEEcCCCchhhHHHHhCCCCCCCCChHHhCceeEEEeec--CCCCcCHHHHHHhhc---cCceEEEE---ecCCCCCCC
Confidence 988654 334333333 35678889999984 456899999999999 56666665 444454
Q ss_pred -CCCHHHHHHHHHHHHhc--CCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCc--cceEEEe
Q 012238 245 -DPTPEQWEKIADVIQEK--NHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAER--IGAMNVV 319 (467)
Q Consensus 245 -~~~~~~l~~l~~~~~~~--~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R--iG~~~~v 319 (467)
.++.++++++++++|+. ++++++|.+|.+|+... .+..+ .-.++.+|+=|+.| .|+- -||+
T Consensus 170 ~sl~i~~I~~~i~~vk~~~p~~iifVDNCYGEFvE~~---EP~~v-------GADl~aGSLIKNpG-GgiAptGGYI--- 235 (403)
T PF06838_consen 170 PSLTIEEIKEIIKFVKEINPDVIIFVDNCYGEFVETQ---EPTEV-------GADLMAGSLIKNPG-GGIAPTGGYI--- 235 (403)
T ss_dssp ----HHHHHHHHHHHHHH-TTSEEEEE-TTTTTTSSS----GGGG-------T-SEEEEETTSGGG-TTT-SS-EEE---
T ss_pred CCCCHHHHHHHHHHHHhhCCCeEEEEeCCcceecccc---Ccccc-------chhheeccceeCCC-CCccCcCCEE---
Confidence 56889999999999874 79999999999998542 22211 23588999999987 4432 2777
Q ss_pred cCCHHHHhh
Q 012238 320 CSSSDLAAR 328 (467)
Q Consensus 320 ~~~~~~~~~ 328 (467)
++.+++++.
T Consensus 236 aGr~~lVe~ 244 (403)
T PF06838_consen 236 AGRKDLVER 244 (403)
T ss_dssp EESHHHHHH
T ss_pred echHHHHHH
Confidence 499999997
No 363
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=98.98 E-value=4e-08 Score=96.85 Aligned_cols=245 Identities=13% Similarity=0.013 Sum_probs=134.5
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCch
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (467)
+...+|+..|.--. .+-+-.|.+.+++.+.++... ... ......+.+..+++.+....+. .-+++.+ +++|+
T Consensus 15 G~~~lD~~~~~~~~--~lGh~~p~i~~ai~~~~~~~~-~~~-~~~~~~~~~~~la~~L~~~~p~--~~~~v~f--~~sGs 86 (339)
T PF00202_consen 15 GREYLDFMSGYGSV--NLGHNHPEIAEAIAEQANKLN-YVS-FSGFTHPEAAELAEKLAELFPG--GLDRVFF--ANSGS 86 (339)
T ss_dssp SEEEEESSHHHHTT--TT-BT-HHHHHHHHHHHHHCS-SCS-TTTSEEHHHHHHHHHHHHHSST--TEEEEEE--ESSHH
T ss_pred CCEEEECCCCccce--ecCCCccccchhHHHHhhhcc-ccc-ccceeccchhhhhhhhhhcccc--ccceeee--ccCch
Confidence 34789998775411 222336888888888775532 111 1111222333444444332211 1458888 99999
Q ss_pred hHHHHHHHHHH------HhCCCCEEEEcCCCCcchHH-HHhhCC------------CCeEEeeeecCCCCCCChhh----
Q 012238 162 GSLRLAAALIE------RYFPGAKVLISSPTWGNHKN-IFNDAR------------VPWSEYRYYDPKTVGLDFEG---- 218 (467)
Q Consensus 162 ~al~l~~~~l~------~~~~gd~Vlv~~P~y~~~~~-~~~~~G------------~~~~~v~~~~~~~~~~d~~~---- 218 (467)
+|++.+.++.. ....-.+|+...-+|..... .+...+ -.+..+|. .++..
T Consensus 87 eAve~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~-------~~~~~~~~~ 159 (339)
T PF00202_consen 87 EAVEAALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPF-------PDPAADEEE 159 (339)
T ss_dssp HHHHHHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEET-------TCHHHHHHH
T ss_pred HHHHHHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCccccccccccccccccccC-------CccchhhhH
Confidence 99999866654 22234699999988875432 111111 12344444 23333
Q ss_pred ------HHHHHHc-CCCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHH
Q 012238 219 ------MIADIKA-APGGSFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFA 290 (467)
Q Consensus 219 ------l~~~l~~-~~~~~~~i~i~~p~NPTG~~~-~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~ 290 (467)
+++.+.+ .++....+++-.-+.-.|... +.+-+++|.++|++||+++|.||+..++.-.+ ..+.. ...
T Consensus 160 ~~~~~~~~~~~~~~~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG---~~~a~-~~~ 235 (339)
T PF00202_consen 160 QACLNALEELIAALNADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTG---KFFAS-EHY 235 (339)
T ss_dssp HHHHHHHHHHHHHHHGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTS---SSSGH-HHH
T ss_pred HHHHHHHHHHHHhhcCCcEEEEEEeccccccCccccccchhhehcccccccccceecccccccccccC---Cccce-ecc
Confidence 3332221 124445555544444456544 56788999999999999999999998884322 12222 223
Q ss_pred hcCCeEEEEecCccCcccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHh
Q 012238 291 TRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVV 364 (467)
Q Consensus 291 ~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L 364 (467)
...++++++ +|.++ .|+.+|.++ ..+++.+. +.......+.+.+.++..++...|
T Consensus 236 gv~PDiv~~---gK~l~-gG~p~sav~---~~~~i~~~------------~~~~~~~~T~~g~p~~~aaa~~~l 290 (339)
T PF00202_consen 236 GVDPDIVTF---GKGLG-GGLPISAVL---GSEEIMEA------------FQPGSHGSTFGGNPLSCAAALATL 290 (339)
T ss_dssp TSSSSEEEE---EGGGG-TTSSEEEEE---EEHHHHTT------------SCTTSSTCTTTT-HHHHHHHHHHH
T ss_pred cccCccccc---ccchh-hhhhccccc---ccchhhcc------------ccccccccccccchHhhhhhhhHH
Confidence 334455443 59998 779999985 66776665 422222223344555656665554
No 364
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=98.98 E-value=8.2e-10 Score=94.96 Aligned_cols=66 Identities=18% Similarity=0.296 Sum_probs=57.7
Q ss_pred CcCCCCcchHHHHHHHHHHHhCCCC--cccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcc
Q 012238 120 KEYLPIEGLAAFNKVTAELLFGADN--SVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGN 189 (467)
Q Consensus 120 ~~Y~~~~G~~~lr~aia~~l~~~~~--~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~ 189 (467)
..|.+..|.++||+++|+|+.+.+| ..+++++|++ |.|++++++++ +...+.|||.|+|++|+|+.
T Consensus 86 a~Y~~~~G~~~lR~AiA~~l~~~~g~~v~~~pd~Ivv--t~Ga~~al~~l--~~~l~dpGD~VlVp~P~Y~~ 153 (153)
T PLN02994 86 ALFQDYHGLANFRKAIANFMAEARGGRVKFDADMIVL--SAGATAANEII--MFCIADPGDAFLVPTPYYAA 153 (153)
T ss_pred hcCCCCCCcHHHHHHHHHHHHHHhCCCCccchhheEE--cCCHHHHHHHH--HHHHcCCCCEEEEeCCCCCC
Confidence 3488889999999999999988777 5678999999 99999999998 45557899999999999963
No 365
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=98.97 E-value=1.4e-07 Score=94.03 Aligned_cols=209 Identities=13% Similarity=0.045 Sum_probs=129.0
Q ss_pred hHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccc-----cCceeeeecCCchhHHHHHHHHHHH-hC-
Q 012238 103 LDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLK-----EQRVATVQGLSGTGSLRLAAALIER-YF- 175 (467)
Q Consensus 103 ~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~-----~~~i~~~~t~ggt~al~l~~~~l~~-~~- 175 (467)
...+-+.+...++.+. ..|...+...++.+.+.+++....|.+-. ...=++ |.|||+++..+...... ..
T Consensus 53 ~~i~~~~l~~~~n~n~-~~~~~~P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~--t~Ggt~anl~al~aAR~~~~~ 129 (373)
T PF00282_consen 53 ASILADLLASALNQNG-FTWEASPAATEIEREVIRWLADLFGLPESFTFSKDAGGVF--TSGGTEANLYALLAARERALP 129 (373)
T ss_dssp HHHHHHHHHHHHT-BT-TSTTTSHHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEE--ESSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhcccc-cccccccccccchHHHHHHHHHHhCCcccccccCCCceeE--eccchHHHHHHHHHHHHHHhh
Confidence 4455566666665432 44544556777888888887766565411 122334 79999999876322211 10
Q ss_pred ----CC-----C-EEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCC---CCcEEEEeCCCCCCC
Q 012238 176 ----PG-----A-KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP---GGSFILLHGCAHNPT 242 (467)
Q Consensus 176 ----~g-----d-~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~---~~~~~i~i~~p~NPT 242 (467)
.| . .|++++-++......+..+|..++.||+++ ++.+|++.|++.+++.. ..+.+|+.+.+...|
T Consensus 130 ~~~~~~~~~~~~~~i~~s~~aH~S~~Kaa~~lGlg~~~I~~~~--~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~ 207 (373)
T PF00282_consen 130 RSKAKGVEEIPKPVIYVSEQAHYSIEKAARILGLGVRKIPTDE--DGRMDIEALEKALEKDIANGKTPFAVVATAGTTNT 207 (373)
T ss_dssp HHHHHTTTHCSSEEEEEETTS-THHHHHHHHTTSEEEEE-BBT--TSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTT
T ss_pred hhhhcccccccccccccccccccHHHHhcceeeeEEEEecCCc--chhhhHHHhhhhhcccccccccceeeeccCCCccc
Confidence 12 2 566777688888999999999999999953 67899999999987531 124466667788888
Q ss_pred CCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhc-CCeEEEEecCccCcccCCCccceEEEecC
Q 012238 243 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR-GMELLVAQSYSKNLGLYAERIGAMNVVCS 321 (467)
Q Consensus 243 G~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~S~SK~~~~~G~RiG~~~~v~~ 321 (467)
|.+ +.+++|+++|+++|+|+.+|.+|.+...-.+.... +... ..-.=+.-+++|.++.| ...|++. +.
T Consensus 208 Ga~---D~l~~i~~i~~~~~~wlHVDaA~gg~~~~~~~~~~-----~~~gi~~adSit~d~HK~l~~P-~~~~~~l--~r 276 (373)
T PF00282_consen 208 GAI---DPLEEIADICEKYNIWLHVDAAYGGSALLSPEYRH-----LLFGIERADSITIDPHKWLGVP-YGCGVLL--VR 276 (373)
T ss_dssp SBB----SHHHHHHHHHHCT-EEEEEETTGGGGGGHCTTGG-----GGTTGGGESEEEEETTTTTS-S-SS-EEEE--ES
T ss_pred ccc---cCHHHHhhhccccceeeeecccccccccccccccc-----cccccccccccccchhhhhcCC-ccceeEE--ee
Confidence 886 66778888899999999999999984321111111 1111 11123355789999865 6678875 46
Q ss_pred CHHHHh
Q 012238 322 SSDLAA 327 (467)
Q Consensus 322 ~~~~~~ 327 (467)
++....
T Consensus 277 ~~~~l~ 282 (373)
T PF00282_consen 277 DKSDLR 282 (373)
T ss_dssp SGGGHH
T ss_pred cccchH
Confidence 665443
No 366
>PRK05367 glycine dehydrogenase; Provisional
Probab=98.96 E-value=2.9e-07 Score=101.09 Aligned_cols=314 Identities=11% Similarity=0.089 Sum_probs=176.9
Q ss_pred EEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCc-----c----hHHHHHHHHHHHhCCCCcccccCceeeee
Q 012238 86 LNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIE-----G----LAAFNKVTAELLFGADNSVLKEQRVATVQ 156 (467)
Q Consensus 86 i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~-----G----~~~lr~aia~~l~~~~~~~~~~~~i~~~~ 156 (467)
.-++.|.| +. +.|+.+.+.+.+ +.++...|.|.+ | +-++++.++++.+-. ..|+.+
T Consensus 79 ~~ig~G~y----~~-~~P~vi~~~i~~--~~~~~t~ytPyQ~EisQG~Leal~~~Qt~la~LtG~~------~anaSl-- 143 (954)
T PRK05367 79 SYIGQGYY----GT-HTPPVILRNILE--NPAWYTAYTPYQPEISQGRLEALLNFQTMVADLTGLE------IANASL-- 143 (954)
T ss_pred cccCCCCC----CC-cCcHHHHHHHHh--CcchhhccCCCChHHHHHHHHHHHHHHHHHHHHHCCC------hhhccc--
Confidence 44677777 22 446666554444 234456677743 3 567778888885433 678888
Q ss_pred cCCchhHHHHHHHHHHHhCC--CCEEEEcCCCCcchHHHH----hhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCc
Q 012238 157 GLSGTGSLRLAAALIERYFP--GAKVLISSPTWGNHKNIF----NDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGS 230 (467)
Q Consensus 157 t~ggt~al~l~~~~l~~~~~--gd~Vlv~~P~y~~~~~~~----~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~ 230 (467)
..++|.+.+.+++.+ .+.+ +|+|++++-.|+.....+ +..|++++.++..+ |.+ . ..+
T Consensus 144 ~d~aTAa~ea~~~a~-~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~~~~~------d~~------~---~~~ 207 (954)
T PRK05367 144 LDEATAAAEAMALAK-RVSKSKSNRFFVDDDVHPQTLDVLRTRAEPLGIEVVVGDAAK------ALD------H---DDV 207 (954)
T ss_pred cccHHHHHHHHHHhh-hhccCCCCEEEEcCccCHHHHHHHHHHHHhCCCEEEEecCcc------CCC------c---ccE
Confidence 899999999763332 2445 489999999998876544 56899999998732 111 1 244
Q ss_pred EEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccC-----
Q 012238 231 FILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKN----- 305 (467)
Q Consensus 231 ~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~----- 305 (467)
..+++.+| |-+|.+.+ +++|+++|+++|.++++|..-..+.-. .++ -+.+ -.|+++|..|.
T Consensus 208 ~~vlvq~p-~~~G~i~d---~~~i~~~ah~~Gal~~vda~~~Al~~l---~~p------ge~G-aDi~vgs~qkfg~P~g 273 (954)
T PRK05367 208 FGVLLQYP-GTSGEVRD---YTALIAAAHARGALVAVAADLLALTLL---TPP------GEMG-ADIAVGSAQRFGVPMG 273 (954)
T ss_pred EEEEEecC-CCCeeecc---HHHHHHHHHHcCCEEEEEehhhhccCC---CCh------hhcC-CCEEEeeCcccCCCCC
Confidence 44555554 78899875 668888899999999998642223221 111 1122 34667777787
Q ss_pred cccCCCccceEEEecCCHHHHhhhhhhhHHHH-H-----HHHH--------hhcc-CccCCCchHHHHHHHHHhCChhhH
Q 012238 306 LGLYAERIGAMNVVCSSSDLAARCCEVAVIQV-K-----SQLK--------RLAR-PMYSNPPVHGARIVANVVGNPALF 370 (467)
Q Consensus 306 ~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~-~-----~~l~--------~~~~-~~~~~~~~~~~~~~~~~L~~~~~~ 370 (467)
||-|| .|++. ..+++.+. .++-+... . ..+. .+.+ ..++|..+ .|.+. ..+. .++
T Consensus 274 ~GGP~--aGfla---vr~~~~r~-lpgrivG~s~d~~g~~~~~lalqtReqhiRrekaTsNict-~qaL~-a~~a--~~y 343 (954)
T PRK05367 274 FGGPH--AAYFA---VRDAYKRS-MPGRIVGVSVDAAGNPALRLALQTREQHIRREKATSNICT-AQVLL-AVMA--SMY 343 (954)
T ss_pred CCCCC--EEEEE---ECHHHHhh-CCCCeeeeecccCCCcccccccccccccccccccccccch-HHHHH-HHHH--HHH
Confidence 55555 68885 33444443 11100000 0 0000 0000 01122211 11111 1110 000
Q ss_pred HHH--HHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccC-CcceEEe-cCCCHHH-HHHHHHcccEEEeCC--C--e
Q 012238 371 DEW--KAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR-QIGMFSF-TGLNKAQ-SDNMTNKWHVYMTKD--G--R 441 (467)
Q Consensus 371 ~~~--~~~l~~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~-~~g~f~~-~~l~~~~-~~~ll~~~gI~v~~g--g--R 441 (467)
-.| ...++++.++...+..++.+.|+ ..|+ +...+ ..+.+.+ .+.+.+. .++++ ++||.+..- + |
T Consensus 344 ~~~~g~~Gl~~Ia~~~~~la~~l~~~L~-~~G~----~~~~~~~f~~~~~~~~~~~~~i~~~l~-~~gi~~~~~~~~~l~ 417 (954)
T PRK05367 344 AVYHGPEGLKAIARRVHRLAAILAAGLR-ALGL----EVVHDSFFDTLTVEVGGDAAAVLARAL-AAGINLRRVDDDHVG 417 (954)
T ss_pred HHHHhhhhHHHHHHHHHHHHHHHHHHHH-hcCc----ccCCCCCCCeEEEeCCCCHHHHHHHHH-HCCceeccccCCEEE
Confidence 011 24477888888889999999998 7663 33222 1122221 1224444 44554 569988543 2 8
Q ss_pred EEeccC-ChhhHHHHHHHHH
Q 012238 442 ISLAGL-SLAKCEYLADAII 460 (467)
Q Consensus 442 is~~~~-~~~~i~~~~~~l~ 460 (467)
||+... ++++|+.++++|.
T Consensus 418 is~~e~~t~~did~l~~~l~ 437 (954)
T PRK05367 418 ISLDETTTREDLAALLAVFG 437 (954)
T ss_pred EEecccCCHHHHHHHHHHHc
Confidence 887654 6689999999986
No 367
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=98.92 E-value=8.1e-07 Score=84.88 Aligned_cols=333 Identities=14% Similarity=0.106 Sum_probs=176.3
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHHhc--CCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCC
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER--GENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 159 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~--~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g 159 (467)
+.+.+|+..|..--.-+.- .|.|.+++.+-+.. .....|.. .-..+|-+++++.+-+. -+.+++ +++
T Consensus 49 G~ryLD~f~Gi~tvslGHc--hP~v~~a~~kQl~~l~H~t~~~~~-~pi~~~Ae~L~s~~P~~------l~~vfF--~ns 117 (442)
T KOG1404|consen 49 GRRYLDAFGGIVTVSLGHC--HPDVVAAAVKQLKKLYHTTSGYLN-PPIHDLAEALVSKLPGD------LKVVFF--VNS 117 (442)
T ss_pred CceeehhhCCeEEEEcCCC--ChHHHHHHHHhhhhhEEeeccccC-CcHHHHHHHHHHhCCCC------ceEEEE--ecC
Confidence 3466776666542222222 46677776665532 12245543 23556777777775433 235777 999
Q ss_pred chhHHHHHHHHHHHhCCCCEEEEcCCCCcchH-HHHhhCCCCeEEeeee----------cCC----CCCCC-----h---
Q 012238 160 GTGSLRLAAALIERYFPGAKVLISSPTWGNHK-NIFNDARVPWSEYRYY----------DPK----TVGLD-----F--- 216 (467)
Q Consensus 160 gt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~-~~~~~~G~~~~~v~~~----------~~~----~~~~d-----~--- 216 (467)
|++|.+++.++.......-.++....+|.... ..+...|......++. +++ -++-+ -
T Consensus 118 GsEANelal~mar~Yt~~~diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~ 197 (442)
T KOG1404|consen 118 GSEANELALKMARLYTGNLDIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPDPYRGIFGGSNEEEASDRY 197 (442)
T ss_pred CchHHHHHHHHHHHhcCCceEEEeeccccCCchhhcccccCCcccccCCCCCCcccccCCCCcccccCCCCchhhhHHHH
Confidence 99999998555444443346777777775433 2333333322222110 000 01111 1
Q ss_pred -hhHHHHHHcC-CCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcC
Q 012238 217 -EGMIADIKAA-PGGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRG 293 (467)
Q Consensus 217 -~~l~~~l~~~-~~~~~~i~i~~p~NPTG~~-~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~ 293 (467)
+++++.+... +.....++.-+-+---|++ +++--+++..++|+++|.++|.||+-.+|.-.+ ..|.. +..
T Consensus 198 a~~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfGRtG---~~wgf----e~h 270 (442)
T KOG1404|consen 198 AKELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFGRTG---HMWGF----ESH 270 (442)
T ss_pred HHHHHHHHHhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhcccccc---ccccc----ccc
Confidence 3444444433 3333344434434333544 456779999999999999999999977776432 22222 222
Q ss_pred CeEEEEecCccCcccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhc-cCccCCCchHHHHHHHHHhCChhhHHH
Q 012238 294 MELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLA-RPMYSNPPVHGARIVANVVGNPALFDE 372 (467)
Q Consensus 294 ~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~L~~~~~~~~ 372 (467)
+-+==+-+++|.+| .|..+|.++ -.+++.+- +.+.. -..+.+.++++..+..++|+= ++
T Consensus 271 ~v~PDIvTmAKgiG-nG~Pl~AVv---tt~EIa~v------------~~~~~~~fnTyggnP~a~avg~aVL~V--ik-- 330 (442)
T KOG1404|consen 271 GVVPDIVTMAKGIG-NGFPLGAVV---TTPEIADV------------LNQKSSHFNTYGGNPVACAVGLAVLKV--IK-- 330 (442)
T ss_pred CCCccHHHHHhhcc-CCCcceeee---cCHHHHHH------------HHhccccccccCCCchhHHHHHHHHHH--HH--
Confidence 22222457899999 889999996 55666665 33322 222334444555555555431 11
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccC--CcceEEecCC----------C---HHHHHHHHHcccEEEe
Q 012238 373 WKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR--QIGMFSFTGL----------N---KAQSDNMTNKWHVYMT 437 (467)
Q Consensus 373 ~~~~l~~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~--~~g~f~~~~l----------~---~~~~~~ll~~~gI~v~ 437 (467)
-++..++.++.-.+|.+.|. ++... ...+.. .-|.++=+.+ . ..++.+-++++|+++.
T Consensus 331 ----ee~LqE~aa~vG~yl~~~l~-~l~d~--h~iIGdVRG~GLm~GvE~V~dk~~~~pp~~~~~~~i~~~cke~Gvlvg 403 (442)
T KOG1404|consen 331 ----EENLQENAAEVGSYLLEKLA-ALKDK--HPIIGDVRGRGLMLGVELVSDKSEPKPPATAEGAVIGEQCKELGVLVG 403 (442)
T ss_pred ----HHhHHHHHHHHHHHHHHHHH-HHhhc--CCceeecccceeEEEEEEecccCCCCCcchHHHHHHHHHHHHhCeeee
Confidence 12444555555666666665 43210 111111 1233321111 1 1234444556799997
Q ss_pred CCC------eEEec-cCChhhHHHHHHHH
Q 012238 438 KDG------RISLA-GLSLAKCEYLADAI 459 (467)
Q Consensus 438 ~gg------Ris~~-~~~~~~i~~~~~~l 459 (467)
.|| ||+-. +++++|++.+++..
T Consensus 404 ~g~i~G~vfriaPPlciT~edi~f~~~~~ 432 (442)
T KOG1404|consen 404 KGGIHGNVFRIAPPLCITKEDIDFAVEYF 432 (442)
T ss_pred cccccceEEEecCCeeccHHHHHHHHHHH
Confidence 775 88743 34889997666633
No 368
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=98.90 E-value=3.3e-06 Score=91.40 Aligned_cols=344 Identities=13% Similarity=0.109 Sum_probs=174.3
Q ss_pred CcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhH
Q 012238 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 163 (467)
Q Consensus 84 ~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a 163 (467)
..+|+..|..-..-+. ...|.+.+++.+.+..-. +-..+.. ..+-...+|+.|....+.. .-+++++ +.+|++|
T Consensus 366 ~ylD~~sg~w~~~lG~-h~~p~I~~Ai~~Qa~rl~-hv~~~~~-~hepa~~LAe~L~~~~~~~-~l~rVff--s~sGSeA 439 (817)
T PLN02974 366 QQFDACASWWTQGPDP-TLQPELARAVAYAAGRYG-HVMFPEN-VHEPALRAAELLLGGPGKG-WASRVFF--SDNGSTA 439 (817)
T ss_pred eEEEcchhHHHhCCCc-CCCHHHHHHHHHHHhhCC-ccccCcc-CCHHHHHHHHHHHhccCCC-CCCEEEE--CCchHHH
Confidence 5777777643222221 125778888888775421 1111111 1233344566554421100 0248999 9999999
Q ss_pred HHHHHHHHHH-hC--C----------------CCEEEEcCCCCcchHH-HHhhCCC---------C-----eEEe--eee
Q 012238 164 LRLAAALIER-YF--P----------------GAKVLISSPTWGNHKN-IFNDARV---------P-----WSEY--RYY 207 (467)
Q Consensus 164 l~l~~~~l~~-~~--~----------------gd~Vlv~~P~y~~~~~-~~~~~G~---------~-----~~~v--~~~ 207 (467)
++.+.++... .. . ..+|+....+|.+... .+...|- . ...+ |..
T Consensus 440 vE~AlKmA~r~y~~~~G~~~~~~~~~~~~~~~r~kIIa~~gsYHG~T~GAms~sg~~~~~~~~~~p~~~~~~~~~~~P~~ 519 (817)
T PLN02974 440 IEVALKMAFRKFIVDHGFLENSGNEKRGGDLIELKVLALDGSYHGDTLGAMEAQAPSVFTGFLQQPWYSGRGLFLDPPTV 519 (817)
T ss_pred HHHHHHHHHHHHHHhcCCCcccccccccccCCCCEEEEECCCcCCCCHHHHhhCCchhhhcccccccccCCCcccCCCcc
Confidence 9998665422 21 1 2368888888864322 2221110 0 0001 100
Q ss_pred ---c-------CCC-----------CC-----CC------------hhhHHHHHHc-----CCCCcEEEEeCC-CCCCCC
Q 012238 208 ---D-------PKT-----------VG-----LD------------FEGMIADIKA-----APGGSFILLHGC-AHNPTG 243 (467)
Q Consensus 208 ---~-------~~~-----------~~-----~d------------~~~l~~~l~~-----~~~~~~~i~i~~-p~NPTG 243 (467)
. +.. +. +| .+.+++.+++ .+.+...+++-. .+.-.|
T Consensus 520 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~f~~~r~~~~~~~~~~~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGG 599 (817)
T PLN02974 520 GMRNGRWNISLPEGFSSGLEGEETTWESRDEVFDKTRDSTPLAKAYRSYIEQQLDEYEASAKNGHIAALIIEPVLHGAGG 599 (817)
T ss_pred ccccccccccCCccccccccccccccccccccccccccchhhhHHHHHHHHHHHHhhccccCCCCEEEEEEeccccCCCC
Confidence 0 000 00 01 1456666652 123444555443 256667
Q ss_pred CCC-CHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCC-CccceEEEecC
Q 012238 244 IDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCS 321 (467)
Q Consensus 244 ~~~-~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-~RiG~~~~v~~ 321 (467)
.++ +++-+++|.++|++||+++|.||+..+|.-.+ ..+.. ....-.++++ .++|.++ .| +.+|.++ .
T Consensus 600 mi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG---~~fa~-e~~gv~PDIi---~~gKgLt-gG~~Plaa~l---~ 668 (817)
T PLN02974 600 MLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLG---VESAW-ELLGCKPDIA---CYAKLLT-GGLVPLAATL---A 668 (817)
T ss_pred cccCCHHHHHHHHHHHHHhCCEEEEeecccCCCccc---chhhH-HhcCCCCCEE---eeccccc-CCCCccEEEE---E
Confidence 765 67889999999999999999999999884321 12222 1222233444 3579988 78 5888885 6
Q ss_pred CHHHHhhhhhhhHHHHHHHHH--hhccCccCCCchHHHHHHHHHhC---ChhhHHHHHHHHHHHHHHHHHHHHHHH----
Q 012238 322 SSDLAARCCEVAVIQVKSQLK--RLARPMYSNPPVHGARIVANVVG---NPALFDEWKAEMEMMAGRIKNVRQKLF---- 392 (467)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~L~---~~~~~~~~~~~l~~~~~~~~~~r~~l~---- 392 (467)
++++.+. +...-+ ......+.+.++++..++.+.|+ ++++.+. ..++-++..+.+.
T Consensus 669 ~~~I~~~--------f~~~~~~~~~~hg~Ty~gnpl~cAaala~L~~~~~~~~~~~-------l~~~~~~l~~~l~~~l~ 733 (817)
T PLN02974 669 TEEVFEA--------FRGPSKLDALLHGHSYTAHPMGCAAAAKALQWYKDPSTNPN-------LIPPGSRLRELWDEELV 733 (817)
T ss_pred cHHHHHh--------hccccccCCcccCCCCCcCHHHHHHHHHHHHHHHcccHHHH-------HHHHHHHHHHHHHHHHH
Confidence 7777776 321000 01112233455555555554443 3222222 2222222223333
Q ss_pred HHhhhccCCCCCcccccCCcceEEe--cC------CC----HHHHHHHHHcccEEEeCCC---eEEe-ccCChhhHHHHH
Q 012238 393 DSLSAKDKSGKDWSFILRQIGMFSF--TG------LN----KAQSDNMTNKWHVYMTKDG---RISL-AGLSLAKCEYLA 456 (467)
Q Consensus 393 ~~l~~~~g~~~~~~~~~~~~g~f~~--~~------l~----~~~~~~ll~~~gI~v~~gg---Ris~-~~~~~~~i~~~~ 456 (467)
+.++ +++. +.-+...|.++.+ .. .+ ..+.+.++.++||++++.| ||.- ...+++++++++
T Consensus 734 ~~l~-~~p~---V~~VRg~Gl~~~iel~~~~~~~~~~~~~a~~v~~~~~~~~Gl~~r~~Gnvi~l~pP~~i~~e~l~~~~ 809 (817)
T PLN02974 734 RAIS-SLPN---VERVVSLGTVLALELDAEGSGSGYSSLYARSVVRRLRREDGIYARPLGNVVYLMCGPTTSPETCTRLL 809 (817)
T ss_pred HHHh-hCCC---eeEEEeeeeEEEEEEecCCcccccchHHHHHHHHHHHHhCCEEEEecCCEEEEeCCCCCCHHHHHHHH
Confidence 3333 3321 1122233322211 11 01 1234455525799999976 4432 233789999999
Q ss_pred HHHHHHH
Q 012238 457 DAIIDSY 463 (467)
Q Consensus 457 ~~l~~~l 463 (467)
++|.+.+
T Consensus 810 ~~l~~~~ 816 (817)
T PLN02974 810 RKVYRRL 816 (817)
T ss_pred HHHHHHh
Confidence 9998875
No 369
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=98.78 E-value=2.9e-06 Score=93.07 Aligned_cols=317 Identities=14% Similarity=0.051 Sum_probs=171.6
Q ss_pred EecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCC-----cc----hHHHHHHHHHHHhCCCCcccccCceeeeec
Q 012238 87 NLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPI-----EG----LAAFNKVTAELLFGADNSVLKEQRVATVQG 157 (467)
Q Consensus 87 ~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~-----~G----~~~lr~aia~~l~~~~~~~~~~~~i~~~~t 157 (467)
.++.|.| .. .+|+.+.+++.+... +...|.|. +| +.++++.++++.+-. ++|+.+ +
T Consensus 107 fiG~G~y----~~-~~P~~v~~~i~~~~~--~~TaytPYqaEisQG~lqal~~~Qt~ia~LtG~~------~anaSL--~ 171 (993)
T PLN02414 107 YIGMGYY----NT-HVPPVILRNILENPG--WYTQYTPYQAEIAQGRLESLLNYQTMITDLTGLP------MSNASL--L 171 (993)
T ss_pred ccCCCCC----Cc-cCCHHHHHHHHhChH--HHhhcCCCchHHHHHHHHHHHHHHHHHHHHhCCC------hhhEee--c
Confidence 3455655 22 246777677665432 22445543 34 678888899996443 789988 9
Q ss_pred CCchhHHHHHHHHHHHhCCC--CEEEEcCCCCcchHHHH----hhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcE
Q 012238 158 LSGTGSLRLAAALIERYFPG--AKVLISSPTWGNHKNIF----NDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSF 231 (467)
Q Consensus 158 ~ggt~al~l~~~~l~~~~~g--d~Vlv~~P~y~~~~~~~----~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~ 231 (467)
.++|.+.+.+.+.. .+.+| |+|++++-.|+.+...+ +..|++++.++..+ .+ ... ....
T Consensus 172 d~aTAaaea~~~a~-~~~~g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~-----~~------~~~---~~v~ 236 (993)
T PLN02414 172 DEGTAAAEAMAMCN-NILKGKKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKD-----FD------YSS---GDVC 236 (993)
T ss_pred CChHHHHHHHHHHH-hcccCCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchh-----hc------ccc---CceE
Confidence 99999999873322 24444 78999999998876655 45688888887631 11 001 1222
Q ss_pred EEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCccc---
Q 012238 232 ILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGL--- 308 (467)
Q Consensus 232 ~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~--- 308 (467)
.+++.+ -|-+|.+.+ +++|+++|+++|+++++ .+ +.+...... + + .+. .-.|++++-.|..+.
T Consensus 237 ~vlvq~-P~~~G~v~d---v~~I~~~ah~~GaL~iV-aa-d~lal~~l~-~---p---ge~-GADi~vgsgqKwg~P~G~ 302 (993)
T PLN02414 237 GVLVQY-PATDGEVLD---YAEFVKNAHANGVKVVM-AT-DLLALTMLK-P---P---GEW-GADIVVGSAQRFGVPMGY 302 (993)
T ss_pred EEEEec-CCCCeEEcC---HHHHHHHHHHcCCEEEE-EE-CHHHhcCCC-C---H---hhc-cCcEEEECCCccccCCCC
Confidence 333222 234899866 55788889999999999 33 222222111 1 1 112 235668888887622
Q ss_pred CCCccceEEEecCCHHHHhhhhhhh-HHH----------------HHHHHHhhccCccCCCchHHHHHHHHHhCChhhHH
Q 012238 309 YAERIGAMNVVCSSSDLAARCCEVA-VIQ----------------VKSQLKRLARPMYSNPPVHGARIVANVVGNPALFD 371 (467)
Q Consensus 309 ~G~RiG~~~~v~~~~~~~~~~~~~~-~~~----------------~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~ 371 (467)
.|-+.|++. ..+++.+. -++ +.. .+.+-.+.. ..+++.. +..++...+..-....
T Consensus 303 GGP~aGfla---vr~~~~r~--~PgriVG~s~d~~g~~~~~l~LqtReqhiRrE-kaTsNic--t~qaL~A~la~~y~~~ 374 (993)
T PLN02414 303 GGPHAAFLA---TSQEYKRL--MPGRIIGVSVDSSGKPALRMAMQTREQHIRRD-KATSNIC--TAQALLANMAAMYAVY 374 (993)
T ss_pred CCCCeeEEE---ECHHHHhh--CCCcccCcccCCCCCcccccccccccchhhhc-ccccchh--HHHHHHHHHHHHHHHH
Confidence 234478886 33444332 010 000 000000000 0112221 1111111111000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccC-CcceEEe-cCCCHHHHHHHHHcccEEEeCC--C--eEEec
Q 012238 372 EWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR-QIGMFSF-TGLNKAQSDNMTNKWHVYMTKD--G--RISLA 445 (467)
Q Consensus 372 ~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~-~~g~f~~-~~l~~~~~~~ll~~~gI~v~~g--g--Ris~~ 445 (467)
+-...++++.++..++..++.+.|. ..|+ +...+ ..+.|.+ ++-+.+..++|. ++||.+... + |+|+.
T Consensus 375 ~g~~Gl~~Ia~ri~~la~~l~~~L~-~~G~----~~~~~~~f~~vt~~~~~~~~v~~~L~-~~gI~l~~~~~~~lrvs~~ 448 (993)
T PLN02414 375 HGPEGLKTIAQRVHGLAGVFAAGLK-KLGF----QVQSLPFFDTVKVKCSDADAIADAAA-KVGINLRVVDANTVTVSFD 448 (993)
T ss_pred hccccHHHHHHHHHHHHHHHHHHHh-hcCC----ccCCCCCcCeEEEecCCHHHHHHHHH-HCCCeeEEecCCeEEEEee
Confidence 0013366778888888999999998 7763 43322 2222322 232333444554 569877643 2 88876
Q ss_pred cC-ChhhHHHHHHHHHH
Q 012238 446 GL-SLAKCEYLADAIID 461 (467)
Q Consensus 446 ~~-~~~~i~~~~~~l~~ 461 (467)
.. ++++|+.++++|..
T Consensus 449 e~~T~edId~L~~~l~~ 465 (993)
T PLN02414 449 ETTTLEDVDKLFKVFAG 465 (993)
T ss_pred ccCCHHHHHHHHHHHcc
Confidence 54 66899999999863
No 370
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=98.69 E-value=1.2e-05 Score=76.08 Aligned_cols=310 Identities=13% Similarity=0.104 Sum_probs=182.0
Q ss_pred CcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHh---CCCCEEEEcCCCCcc-hHHHHh
Q 012238 120 KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY---FPGAKVLISSPTWGN-HKNIFN 195 (467)
Q Consensus 120 ~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~---~~gd~Vlv~~P~y~~-~~~~~~ 195 (467)
..|....+.-.|.+++.+.+.- +.++. |.-|-+|-++...++... .||.+..+++.+|.. ...-.+
T Consensus 73 EAYagsrs~~~L~~avkdifGf--------q~~iP--thQGRgAE~Il~~i~ik~~~~~pg~~~~~~sN~~FdTTr~h~~ 142 (471)
T COG3033 73 EAYAGSRSYYALADAVKDIFGF--------QYTIP--THQGRGAENILIPILIKKGEQEPGSKMVAFSNYHFDTTRGHIQ 142 (471)
T ss_pred hhhcccccHHHHHHHHHHhcCc--------eeeee--ccCCccHHHHHHHHHhhhccccCCccccccccceecchhHHHH
Confidence 6798888999999999998632 34544 777777766642222111 266666677766654 344556
Q ss_pred hCCCCeEEeeeecCC--------CCCCChhhHHHHHHcCCC--CcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCee
Q 012238 196 DARVPWSEYRYYDPK--------TVGLDFEGMIADIKAAPG--GSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIP 265 (467)
Q Consensus 196 ~~G~~~~~v~~~~~~--------~~~~d~~~l~~~l~~~~~--~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~l 265 (467)
..|+.++.++.++.. .+.+|++.|++.+++... -+.+++..+.|.-.|.-.+.+.+++..++|++|++.+
T Consensus 143 ~ng~~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipv 222 (471)
T COG3033 143 INGATPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPV 222 (471)
T ss_pred hcCCccccccccccccccccCCCCCccCHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCcE
Confidence 788888887764322 245899999999987532 3344444445667799999999999999999999999
Q ss_pred EEeccC-CCCCC----CCCCCChhHHHHHHhc--CCeEEEEecCccCcccCCCccceEEEecCCHHHHhhhhhhhHHHHH
Q 012238 266 FFDVAY-QGFAS----GSLDNDASSVRLFATR--GMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVK 338 (467)
Q Consensus 266 i~Deay-~~~~~----~~~~~~~~~~~~~~~~--~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~ 338 (467)
+.|.+- .+-.+ .+.....|++...+.. ..-.-+..|..|.-- .. +|.++. ..++...+ +.
T Consensus 223 v~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~sYaD~~~mS~KKD~l-vn--mGGfl~-~~D~~~fD---------vy 289 (471)
T COG3033 223 VMDAARFAENAYFIKQREPGYRDWSIEEIAREMYSYADGCTMSAKKDGL-VN--MGGFLC-FKDDSFFD---------VY 289 (471)
T ss_pred EeehhhhhhhhhhhhhcCcccccccHHHHHHHHHhhhhhheeeccccce-ec--cccEEE-ecCccHHH---------HH
Confidence 999872 11111 1222345566555431 112234567777543 22 344431 23442211 22
Q ss_pred HHHHhhcc-----CccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcc
Q 012238 339 SQLKRLAR-----PMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIG 413 (467)
Q Consensus 339 ~~l~~~~~-----~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~~~g 413 (467)
.+++...- +.+.+...-...+.+.-|.+ .....| +. .|+ ...++|.+.|. +.|. .+..|.||
T Consensus 290 ~~~~~~~V~~eG~~tYGgl~GrdmealAvGL~e-~~~~~y---l~---~Rv-~Qv~YL~~~l~-~~GV----pi~~paGG 356 (471)
T COG3033 290 EECRTLVVVQEGFPTYGGLAGRDMEALAVGLRE-GVNFDY---LA---HRV-AQVQYLADGLE-EAGV----PIVQPAGG 356 (471)
T ss_pred HHHHhheEeeccccccCcccchhHHHHHHHHHH-hcCcHH---HH---HHH-HHHHHHHHHHH-hcCC----eeEecCCC
Confidence 22333221 12223332223333322322 122222 22 223 23567888998 8884 56777777
Q ss_pred eEEecCC-------C------HHHHHHHHHcccEEEeCCC---------------------eEEec--cCChhhHHHHHH
Q 012238 414 MFSFTGL-------N------KAQSDNMTNKWHVYMTKDG---------------------RISLA--GLSLAKCEYLAD 457 (467)
Q Consensus 414 ~f~~~~l-------~------~~~~~~ll~~~gI~v~~gg---------------------Ris~~--~~~~~~i~~~~~ 457 (467)
--+|++. . ..+..++-++.||-...-| |+.+. ..+.+.++.+++
T Consensus 357 Havfvda~~~lphip~eqFpaqala~ely~e~GiRavElG~~~~~rd~ktg~q~~~~~elvRltipRrtYt~~HmD~V~~ 436 (471)
T COG3033 357 HAVFVDAGKFLPHIPAEQFPAQALACELYKEAGIRAVELGSFSLGRDPKTGKQHPPPAELVRLTIPRRTYTQTHMDFVIE 436 (471)
T ss_pred ceEEeehhhhcCCCChhhCcHHHHHHHHHHHhCeeeeeeeceecccCCCccccCCCchheeeEeccccccchhHHHHHHH
Confidence 5566532 1 2345566677888765532 77764 346688999999
Q ss_pred HHHHHHHh
Q 012238 458 AIIDSYHN 465 (467)
Q Consensus 458 ~l~~~l~~ 465 (467)
+++.+.++
T Consensus 437 a~~~l~e~ 444 (471)
T COG3033 437 AFKALKEN 444 (471)
T ss_pred HHHHHHhc
Confidence 99888653
No 371
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=98.68 E-value=4.9e-06 Score=80.97 Aligned_cols=215 Identities=17% Similarity=0.084 Sum_probs=135.4
Q ss_pred CcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCcchHHHHH-HHHHHHhCCCCcccccCceeeeecCCchh
Q 012238 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNK-VTAELLFGADNSVLKEQRVATVQGLSGTG 162 (467)
Q Consensus 84 ~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~lr~-aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (467)
++||++--.-.+.-+-....+.+.+++...+.......|.-..|.-.-|- .+++.+.+-.+ .+.+++ +++.+.
T Consensus 21 ~viN~~G~v~~t~lG~s~~~~e~iea~~~~~~~~v~Le~~l~~g~~~~R~~~~~~~~~~~~~----aea~~i--vnnn~a 94 (395)
T COG1921 21 RVINAIGTVLMTNLGRSLYSPEAIEAMKEAMRAPVELETDLKTGKRGARLTELAELLCGLTG----AEAAAI--VNNNAA 94 (395)
T ss_pred hhhhhhhhheeccCCCccCCHHHHHHHHHHhcccceeeeecccchhhHHHHHHHHHHhcccc----hhheee--ECCcHH
Confidence 56666643333333444458888899988886544455544444322222 34444333321 356666 788888
Q ss_pred HHHHHHHHHHHhCCCCEEEEcC-----CCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCC
Q 012238 163 SLRLAAALIERYFPGAKVLISS-----PTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGC 237 (467)
Q Consensus 163 al~l~~~~l~~~~~gd~Vlv~~-----P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~ 237 (467)
|+.++ +..+.++.+|+++. ++.++...+++..|++++++... ..-...+++.++.+ ++.+++-..
T Consensus 95 AVll~---~~al~~~~EvVis~g~lV~gg~~~v~d~~~~aG~~l~EvG~t----n~t~~~d~~~AIne---~ta~llkV~ 164 (395)
T COG1921 95 AVLLT---LNALAEGKEVVVSRGELVEGGAFRVPDIIRLAGAKLVEVGTT----NRTHLKDYELAINE---NTALLLKVH 164 (395)
T ss_pred HHHHH---HhhhccCCeEEEEccccccCCCCChhHHHHHcCCEEEEeccc----CcCCHHHHHHHhcc---CCeeEEEEe
Confidence 88886 44444455555543 47788999999999999998663 23677889899984 444444333
Q ss_pred CCC-CCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceE
Q 012238 238 AHN-PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAM 316 (467)
Q Consensus 238 p~N-PTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~ 316 (467)
-+| +--..++ .++++++|+++|+++++|.+-..... ..+.++.+...+. .++++|--|.++ |-+-|.+
T Consensus 165 s~~~~f~~~l~---~~~l~~ia~~~~lpvivD~aSg~~v~-----~e~~l~~~la~Ga-DLV~~SgdKllg--GPqaGii 233 (395)
T COG1921 165 SSNYGFTGMLS---EEELVEIAHEKGLPVIVDLASGALVD-----KEPDLREALALGA-DLVSFSGDKLLG--GPQAGII 233 (395)
T ss_pred ecccccccccc---HHHHHHHHHHcCCCEEEecCCccccc-----cccchhHHHhcCC-CEEEEecchhcC--CCccceE
Confidence 333 2222334 44677779999999999999444332 1223445555544 466888899986 6677888
Q ss_pred EEecCCHHHHhh
Q 012238 317 NVVCSSSDLAAR 328 (467)
Q Consensus 317 ~~v~~~~~~~~~ 328 (467)
+ +.++++++
T Consensus 234 ~---GkKelI~~ 242 (395)
T COG1921 234 V---GKKELIEK 242 (395)
T ss_pred e---chHHHHHH
Confidence 4 99999988
No 372
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=98.65 E-value=1e-05 Score=76.70 Aligned_cols=342 Identities=13% Similarity=0.125 Sum_probs=189.1
Q ss_pred CcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCC--CcchHHHHHHH---H-HHHhCCCCcccccC-ceeeee
Q 012238 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLP--IEGLAAFNKVT---A-ELLFGADNSVLKEQ-RVATVQ 156 (467)
Q Consensus 84 ~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~--~~G~~~lr~ai---a-~~l~~~~~~~~~~~-~i~~~~ 156 (467)
+-|.|=..++ +....|.+|+...+.+.++.+|+. ..|-.++...+ + +.-...++ ++|+ .=+-||
T Consensus 41 ~gieLIaSEN-------Fts~aVmeAlGS~ltNKYSEGyPG~RYYGGne~ID~iE~LCq~RALeaF~--ldp~kWGVNVQ 111 (477)
T KOG2467|consen 41 RGIELIASEN-------FTSRAVMEALGSCLTNKYSEGYPGARYYGGNEYIDQIELLCQKRALEAFG--LDPEKWGVNVQ 111 (477)
T ss_pred cceeEeeccc-------chHHHHHHHHhHHhhcccccCCCcccccCcchHHHHHHHHHHHHHHHHhC--CCHHHCceeec
Confidence 4577765544 237889999999987766666643 12222232221 1 11111122 2243 334467
Q ss_pred cCCchhHHHHHHHHHHHhCCCCEEEEcC-C--CCc--chHHHHhhCCCC-----eEEeeeecCCCCCCChhhHHHHHHcC
Q 012238 157 GLSGTGSLRLAAALIERYFPGAKVLISS-P--TWG--NHKNIFNDARVP-----WSEYRYYDPKTVGLDFEGMIADIKAA 226 (467)
Q Consensus 157 t~ggt~al~l~~~~l~~~~~gd~Vlv~~-P--~y~--~~~~~~~~~G~~-----~~~v~~~~~~~~~~d~~~l~~~l~~~ 226 (467)
..+|+.|.+.+ ..+.+.|+|+++-.+ | ++- +|..--+...+. --+|.+ ++.++-+|.|.|++....
T Consensus 112 p~SGSPANfav--Ytall~Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv-~~~TG~IDYD~Le~~A~~- 187 (477)
T KOG2467|consen 112 PYSGSPANFAV--YTALLKPHERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKV-DPSTGYIDYDKLEKTATL- 187 (477)
T ss_pred cCCCCchhhHH--HhhhcCCCCeeeeccCCCCCccccccccCCceeeeeeeecccCceee-CCCCCceehHHHHHHHHh-
Confidence 78899988887 566688999998766 3 221 111111111111 122333 356788999999998776
Q ss_pred CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCC-CCCCCCCCCChhHHHHHHhcCCeEEEEecCccC
Q 012238 227 PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ-GFASGSLDNDASSVRLFATRGMELLVAQSYSKN 305 (467)
Q Consensus 227 ~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 305 (467)
-++++++-.....| ..++-+ ++-++|.+.|.+++.|.++. ++..... -+.++ ..-.||..+-.|.
T Consensus 188 -frPk~iiaG~SaY~--R~~DYa---R~R~Iad~~gA~Lm~DMAHISgLVAA~v--ipsPF------ey~DiVTTTTHKs 253 (477)
T KOG2467|consen 188 -FRPKLIIAGTSAYS--RLIDYA---RFRKIADKVGAYLMADMAHISGLVAAGV--IPSPF------EYCDIVTTTTHKS 253 (477)
T ss_pred -cCCcEEEeccccch--hhccHH---HHHHHHHhcCceeehhhhhHHHHHhccc--CCCcc------cccceeecccccc
Confidence 35567764433333 233444 45555888899999999963 3332211 01111 1245778888898
Q ss_pred cccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCcc-CCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q 012238 306 LGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMY-SNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRI 384 (467)
Q Consensus 306 ~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~ 384 (467)
+ .|-|-|.|.+.-+.+..-...-....-++.+.+....-+.. .+|-.+...+++.+|.... ..+..+..++.
T Consensus 254 L--RGPRg~mIFyRkGvk~~~~k~g~~i~ydlE~kINfaVFP~lQGGPHNhtIaalAvALkQa~-----tpefk~Yq~qV 326 (477)
T KOG2467|consen 254 L--RGPRGAMIFYRKGVKSIKPKQGKEILYDLEDKINFAVFPGLQGGPHNHTIAALAVALKQAM-----TPEFKEYQKQV 326 (477)
T ss_pred c--cCCcceeEEEeccCCcCCCCCCCcceechhhhhhhhccccccCCCCcchHHHHHHHHHhhC-----CHHHHHHHHHH
Confidence 6 67888887653322211100000001123343444333332 2444444344444443211 12245666777
Q ss_pred HHHHHHHHHHhhhccCCCCCcccccCCcceEEe-c-----CCCHHHHHHHHHcccEEE------------eCCC-eEEec
Q 012238 385 KNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSF-T-----GLNKAQSDNMTNKWHVYM------------TKDG-RISLA 445 (467)
Q Consensus 385 ~~~r~~l~~~l~~~~g~~~~~~~~~~~~g~f~~-~-----~l~~~~~~~ll~~~gI~v------------~~gg-Ris~~ 445 (467)
.++...|.+.|. +.|. +......-.++. + |++...+++.++.-+|.+ .||| ||.-.
T Consensus 327 ~~Nakala~~l~-~~Gy----~lvtgGTDnHlvLvDLr~~G~dGarvE~vle~~~I~~NKNtvpGD~Sal~PgGiRiGtP 401 (477)
T KOG2467|consen 327 LKNAKALASALI-SRGY----KLVTGGTDNHLVLVDLRPKGVDGARVEKVLELCHIALNKNTVPGDKSALSPGGIRIGTP 401 (477)
T ss_pred HHHHHHHHHHHH-HcCc----eEecCCccceEEEEeccccCCchHHHHHHHHHhhhhhcCCcCCCCccccCCCceeccch
Confidence 788888889998 8873 555444444433 2 567788888888777754 3445 87532
Q ss_pred -----cCChhhHHHHHHHHHHHHH
Q 012238 446 -----GLSLAKCEYLADAIIDSYH 464 (467)
Q Consensus 446 -----~~~~~~i~~~~~~l~~~l~ 464 (467)
+..+++++++.+-|.++++
T Consensus 402 AmTsRG~~e~df~~v~~fi~~av~ 425 (477)
T KOG2467|consen 402 AMTSRGFGEEDFEKVADFIDRAVK 425 (477)
T ss_pred hhcccCccHHHHHHHHHHHHHHHH
Confidence 2367889988888888764
No 373
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=98.65 E-value=5e-05 Score=79.66 Aligned_cols=166 Identities=8% Similarity=0.014 Sum_probs=113.3
Q ss_pred hHHHH-HHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhC--C---
Q 012238 103 LDVVK-KAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF--P--- 176 (467)
Q Consensus 103 ~~~v~-~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~--~--- 176 (467)
++.+. +.+....+.+ ...|...++...+.+.+.+++.+..|..- ...+ + |.|||.|...+........ |
T Consensus 96 ~paila~~~a~~~N~n-~~~~e~SP~~t~lE~~vi~~la~l~G~~~-~~G~-~--TsGGT~ANl~aL~~AR~~k~~p~a~ 170 (608)
T TIGR03811 96 MPAILAYNYAMLWNGN-NVAYESSPATSQMEEEVGKEFATLMGYKN-GWGH-I--VADGSLANLEGLWYARNIKSLPFAM 170 (608)
T ss_pred HHHHHHHHHHHHhCCC-CCccccCchHHHHHHHHHHHHHHHhCCCC-CCeE-E--eCChHHHHHHHHHHHHHhhhccchh
Confidence 44444 4444444443 24454555667777777777766655432 2223 4 7999998876532221110 0
Q ss_pred ---------------------------------------------C------CEEEEcCCCCcchHHHHhhCCC---CeE
Q 012238 177 ---------------------------------------------G------AKVLISSPTWGNHKNIFNDARV---PWS 202 (467)
Q Consensus 177 ---------------------------------------------g------d~Vlv~~P~y~~~~~~~~~~G~---~~~ 202 (467)
| .+|+++.-.+..+...+..+|+ .++
T Consensus 171 ~~~~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa~ilGlG~~~vv 250 (608)
T TIGR03811 171 KEVKPELVAGKSDWELLNMPTKEIMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLKAADIIGIGLDQVI 250 (608)
T ss_pred hhccccccccccchhhcccccccccccccccccchhhhhhhccccccccccceEEEECCCccHHHHHHHHHcCCCcccEE
Confidence 0 1688888888889999999999 588
Q ss_pred EeeeecCCCCCCChhhHHHHHHcC---CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCC--eeEEeccCCCCC
Q 012238 203 EYRYYDPKTVGLDFEGMIADIKAA---PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNH--IPFFDVAYQGFA 275 (467)
Q Consensus 203 ~v~~~~~~~~~~d~~~l~~~l~~~---~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~--~li~Deay~~~~ 275 (467)
.||+ ++++.+|++.|++.+++. ...+.+|+-+.+...+|.+=+.+++.+|++.++++|+ ++.+|.+|.++.
T Consensus 251 ~Vpv--D~~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~gl~~~lHVDAAyGG~~ 326 (608)
T TIGR03811 251 PVPV--DSNYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIVALRNKLMKEGIYFYLHVDAAYGGYG 326 (608)
T ss_pred Eeec--CCCCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHHHHHHHHHHcCCceeEeeeccccchh
Confidence 9998 456789999999998742 2344566767789999998887777777666688998 699999999864
No 374
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=98.62 E-value=7.2e-06 Score=79.77 Aligned_cols=261 Identities=14% Similarity=0.060 Sum_probs=136.0
Q ss_pred CCCEEEEcCCCCcchHHHHhhCCCCeEEeeee-cCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHH-HHHH
Q 012238 176 PGAKVLISSPTWGNHKNIFNDARVPWSEYRYY-DPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPE-QWEK 253 (467)
Q Consensus 176 ~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~-~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~-~l~~ 253 (467)
.++.|+.+.-..-.-...+..+|.+++.+|.. +++....|.+.+++.+++......+.++++.. +...... ++++
T Consensus 100 ~a~~Viw~ridqkSc~kai~~AGl~~~vV~~~~~~d~l~td~~~ie~~i~~~G~~~iLcvlttts---cfapr~~D~i~~ 176 (389)
T PF05889_consen 100 KAKYVIWPRIDQKSCFKAIERAGLEPVVVENVLEGDELITDLEAIEAKIEELGADNILCVLTTTS---CFAPRLPDDIEE 176 (389)
T ss_dssp T--EEEEEEEETHHHHHHHHHTT-EEEEE-EEEETTEEEEHHHHHHHHHHHHCGGGEEEEEEESS---TTTTB----HHH
T ss_pred CCceEEEeeccccchHHHHHhcCCeEEEeeccCCCCeeeccHHHHHHHHHHhCCCCeEEEEEecC---ccCCCCCccHHH
Confidence 67888887754433445567789999999853 23334567888888887654455555555432 3333333 4999
Q ss_pred HHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecCCHHHHhhhhhhh
Q 012238 254 IADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARCCEVA 333 (467)
Q Consensus 254 l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~ 333 (467)
|+++|++||+..|+..||.--... -...+......+.-.+++.|.-|+|-.| +|-.++...++..+..
T Consensus 177 IakiC~~~~IPhlvNnAYgvQ~~~----~~~~i~~a~~~GRvda~vqS~dkNF~VP---vGgai~As~~~~~i~~----- 244 (389)
T PF05889_consen 177 IAKICKEYDIPHLVNNAYGVQSSK----CMHLIQQAWRVGRVDAFVQSTDKNFMVP---VGGAIMASFDPSGILA----- 244 (389)
T ss_dssp HHHHHHHHT--EEEEGTTTTT-HH----HHHHHHHHHHHSTCSEEEEEHHHHHCEE---SSHEEEEESSHHHHHH-----
T ss_pred HHHHHHHcCCceEEccchhhhHHH----HHHHHHHHHhcCCcceeeeecCCCEEec---CCCcEEEecCHHHHHH-----
Confidence 999999999999999998642210 0111222223345567899999999654 4554444567777776
Q ss_pred HHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcc
Q 012238 334 VIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIG 413 (467)
Q Consensus 334 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~~~g 413 (467)
+.+....-.+..|.+-..+-...|.-. .|...+.++.+.+...++++.+.-+ +.+.. -.+.......
T Consensus 245 -------vs~~YpGRas~sp~ld~~itLl~LG~~----g~~~ll~~r~~~f~~l~erl~~~ae-e~~e~-ll~~p~N~is 311 (389)
T PF05889_consen 245 -------VSKEYPGRASASPSLDLFITLLSLGCT----GYGALLKERKASFPYLKERLKKWAE-EVGER-LLETPRNHIS 311 (389)
T ss_dssp -------HHHTSHSHBTSHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHH-HTTEE-BSSSTT-SSE
T ss_pred -------HHHHhhhhhhcccchHHHHHHHHHhhh----HHHHHHHHHHHHHHHHHHHHHHHHH-Hhhhh-hcCCCCCCee
Confidence 444333223333433322222222221 2333344455555444444444443 33310 0111112222
Q ss_pred eEEec-CC---C---HHHHHHHHHcccEE----EeCCC-------------eEEe---ccCChhhHHHHHHHHHHHHH
Q 012238 414 MFSFT-GL---N---KAQSDNMTNKWHVY----MTKDG-------------RISL---AGLSLAKCEYLADAIIDSYH 464 (467)
Q Consensus 414 ~f~~~-~l---~---~~~~~~ll~~~gI~----v~~gg-------------Ris~---~~~~~~~i~~~~~~l~~~l~ 464 (467)
+.+-+ .+ + ..++-.+|...+|. +.+++ -|.+ -+++++|++.++++|+++++
T Consensus 312 ~a~tl~~l~~~~~k~~~~lgs~Lf~R~VsG~RvV~~~~~~~tsh~~~yp~~Ylt~AsaiG~~~eevd~~v~rL~k~i~ 389 (389)
T PF05889_consen 312 MAFTLDTLYEISQKDGTFLGSMLFKRGVSGIRVVTPGGKKQTSHSSNYPCPYLTAASAIGMTREEVDYFVKRLDKIIK 389 (389)
T ss_dssp EEEE-TTCCTCCSSHHHHHHHHHHHTTEESSEEEETSSCEEETTSS--SSSEEEEEE-TT--HHHHHHHHHHHHHHHH
T ss_pred EEEECccchhhccchhhhHHHHHHhCCcccceeeccCCCcccccCCCCchHHHHHHHHhCCCHHHHHHHHHHHHHHhC
Confidence 23222 22 1 24455555555763 44443 2222 24589999999999999875
No 375
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=98.60 E-value=2.4e-06 Score=78.78 Aligned_cols=172 Identities=20% Similarity=0.239 Sum_probs=121.6
Q ss_pred CcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcC--CCCcchHH----------
Q 012238 125 IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISS--PTWGNHKN---------- 192 (467)
Q Consensus 125 ~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~--P~y~~~~~---------- 192 (467)
.-|-+-|.+-.|+.+... .-++=+|..+||+|+..+ +...+.|||+.+... |+- ...+
T Consensus 64 D~GRdtLe~vyA~vf~aE-------~a~VRpq~isGTHAI~~a--Lfg~LRpgDell~i~G~PYD-TLeevIG~rg~~~g 133 (416)
T COG4100 64 DLGRDTLERVYAQVFGAE-------AALVRPQIISGTHAIACA--LFGILRPGDELLYITGSPYD-TLEEVIGLRGEGQG 133 (416)
T ss_pred ccchhHHHHHHHHHhccc-------cceeeeeeecchhHHHHH--HHhccCCCCeEEEecCCcch-hHHHHhccCCCCcc
Confidence 456667777777775443 344445668999999998 777889999887554 432 2222
Q ss_pred HHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCC----CCCHHHHHHHHHHHHhc--CCeeE
Q 012238 193 IFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGI----DPTPEQWEKIADVIQEK--NHIPF 266 (467)
Q Consensus 193 ~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~----~~~~~~l~~l~~~~~~~--~~~li 266 (467)
.++.+|+....+|+. .++.+|++.+.+.++ ++++++.+ +-.+|. .++.+++++++++.|+- |++++
T Consensus 134 SL~dfgi~Y~~v~Lt--~~gkiD~~~v~~~i~---~~tkli~I---QRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivF 205 (416)
T COG4100 134 SLKDFGIKYKAVPLT--ADGKIDIQAVKTAIS---DRTKLIGI---QRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVF 205 (416)
T ss_pred cHHHhCcceeecccc--cCCcccHHHHHHhcC---ccceEEEE---EeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEE
Confidence 346678888888884 356799999999998 67777776 344454 36789999999999974 79999
Q ss_pred EeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCc--cceEEEecCCHHHHhh
Q 012238 267 FDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAER--IGAMNVVCSSSDLAAR 328 (467)
Q Consensus 267 ~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R--iG~~~~v~~~~~~~~~ 328 (467)
+|.+|.+|.... .+..+ .-.+..+|+-|+-| .|+- -||+ ++.+++++.
T Consensus 206 VDNCYGEFvE~~---EPt~v-------GaDliAGSLIKNpG-GgiaktGGYi---aGk~~~ve~ 255 (416)
T COG4100 206 VDNCYGEFVEEK---EPTHV-------GADLIAGSLIKNPG-GGIAKTGGYI---AGKAELVEA 255 (416)
T ss_pred Eeccchhhhhcc---Ccccc-------chhhhccceeeCCC-Cceeecccee---echHHHHHh
Confidence 999999998542 22211 23577999999876 3321 2777 488888776
No 376
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=98.56 E-value=2e-05 Score=77.22 Aligned_cols=276 Identities=15% Similarity=0.135 Sum_probs=154.3
Q ss_pred cCCchhHHHHHHHHHHHh--C-CC---CEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCc
Q 012238 157 GLSGTGSLRLAAALIERY--F-PG---AKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGS 230 (467)
Q Consensus 157 t~ggt~al~l~~~~l~~~--~-~g---d~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~ 230 (467)
|.|+++++.++-.--... . .| ..++++......+....+.++.++..+|++ +.++.+|+..+.+.+. +++
T Consensus 144 t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~a~eK~a~yf~v~l~~V~~~-~~~~~~D~~k~~~~i~---eNt 219 (491)
T KOG1383|consen 144 TVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAAFEKAARYFEVELREVPLD-EGDYRVDPGKVVRMID---ENT 219 (491)
T ss_pred ccccchHHHHHHHHHHHHHHhccCCCCccccchHHHHHHHHHHHhhEEEEEEeeecc-ccceEecHHHHHHHhc---cce
Confidence 789999954431110011 1 12 256666677788888999999999999996 4789999999999998 788
Q ss_pred EEEEeCCCCCCCCCCCCHHHHHHHHHHHHh-cCCeeEEeccCCCCCC--CCCCCChhHHHHHHhcCCeEEEEecCccCcc
Q 012238 231 FILLHGCAHNPTGIDPTPEQWEKIADVIQE-KNHIPFFDVAYQGFAS--GSLDNDASSVRLFATRGMELLVAQSYSKNLG 307 (467)
Q Consensus 231 ~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~-~~~~li~Deay~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 307 (467)
+.++..-|+.|+|.. +..++|.++..+ +++.+.+|.+-.+|.- +......+. |-..+-.-|.+.+..=.|.
T Consensus 220 i~lv~~~~~~p~G~~---e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~~~~fd---Fr~p~V~Sisa~~HKYGl~ 293 (491)
T KOG1383|consen 220 IMLVGSLPNFPTGEI---EDVEKLADLLLEIWDIPIHVDACLGGFINPAGYLNEEEFD---FRVPGVTSISADGHKYGLA 293 (491)
T ss_pred EEEEEEcCCCCccch---hhHHHHHHHHHHHhCCceeecccCccccccccccCccccc---cCCCCceeEeeccceeeee
Confidence 999999999999984 566678887888 9999999999888864 211111111 1011112222333223445
Q ss_pred cCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccC----c---cCCCc--hHHHHHHHHHhCChhhHHHHHHHHH
Q 012238 308 LYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARP----M---YSNPP--VHGARIVANVVGNPALFDEWKAEME 378 (467)
Q Consensus 308 ~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~---~~~~~--~~~~~~~~~~L~~~~~~~~~~~~l~ 378 (467)
++| +||++ -.++++.... +.... .+... . .+-+. ..+|++...-|.. +...
T Consensus 294 ~~G--~~~vl--~r~k~~~~~q-------~~~~~-~w~Gg~y~s~TlngSR~g~~va~~wa~~~~lG~--------eGY~ 353 (491)
T KOG1383|consen 294 PAG--SSWVL--YRNKELLPHQ-------LFFHT-DWLGGIYASPTLNGSRPGSQVAAQWAALMSLGE--------EGYR 353 (491)
T ss_pred ecC--cEEEE--Ecccccccce-------EEEec-cccCccccCcccccCCcccHHHHHHHHHHHhhH--------HHHH
Confidence 566 58886 3555443320 00000 11111 1 11111 2233333222222 2344
Q ss_pred HHHHHHHHHHHHHHHHhhhccCCCCCcccc-cCCcceEEecC--CCHHHHHHHHHcccEEEeC----CC-eEEeccC--C
Q 012238 379 MMAGRIKNVRQKLFDSLSAKDKSGKDWSFI-LRQIGMFSFTG--LNKAQSDNMTNKWHVYMTK----DG-RISLAGL--S 448 (467)
Q Consensus 379 ~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~-~~~~g~f~~~~--l~~~~~~~ll~~~gI~v~~----gg-Ris~~~~--~ 448 (467)
+..+++.+....+.+.++ ..+ ++..+ .|.-.+-+|-. ++.-.+..++.++|-.+.. .+ -|++... .
T Consensus 354 ~~~~~ive~~~~l~egie-~i~---~i~i~gkp~vs~~~~~s~~~~i~elsd~l~~~GW~lnalq~P~a~Hi~vt~~~~~ 429 (491)
T KOG1383|consen 354 ENTQNIVETARKLREGIE-NIK---GIKIVGKPLVSFILFGSNDVNIFELSDLLRKKGWILNALQFPAAIHICVTRVHAR 429 (491)
T ss_pred HHHHHHHHHHHHHHHhhh-ccc---cceecCCCcEEEEEccCCccchhhhhHHHHhcCcCccccCCCCceEEEEEeeecc
Confidence 555566677777888888 543 13333 34434333332 2322355666666765432 23 3443321 2
Q ss_pred hhhHHHHHHHHHHHHHhc
Q 012238 449 LAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 449 ~~~i~~~~~~l~~~l~~~ 466 (467)
++--++++.-|+++++++
T Consensus 430 ~~~A~~~v~Di~~~~~el 447 (491)
T KOG1383|consen 430 EDVADRFVADIRKVVEEL 447 (491)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 233466777777776653
No 377
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=98.50 E-value=7.9e-05 Score=72.57 Aligned_cols=139 Identities=16% Similarity=0.188 Sum_probs=102.6
Q ss_pred CcCCC---CcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhC--CC----CEEEEcCCCCcch
Q 012238 120 KEYLP---IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF--PG----AKVLISSPTWGNH 190 (467)
Q Consensus 120 ~~Y~~---~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~--~g----d~Vlv~~P~y~~~ 190 (467)
+-|.| .+|..++...+.+||....|. +.|. +|.+.|.++-+....++.... .| +.|+||+-.+.-.
T Consensus 96 HP~~pe~~vqG~l~li~~Lq~~L~~ITG~----Davs-LQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTN 170 (496)
T COG1003 96 HPFQPEEQVQGYLELIYELQEWLKEITGM----DAVS-LQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTN 170 (496)
T ss_pred CCCCChHHHHHHHHHHHHHHHHHHHhcCC----ceee-ccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCC
Confidence 44555 468888888888888765443 2333 355666665555433333332 33 5899999999888
Q ss_pred HHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEecc
Q 012238 191 KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVA 270 (467)
Q Consensus 191 ~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Dea 270 (467)
...+...|.+++.|++ ++++.+|+++|++.+. +++..+.+++|+ -.-+=.+.+.+|+++..++|-.+..|.+
T Consensus 171 PASAam~G~~VV~V~~--~~~G~VDlddLk~k~~---~~~AalMiTnPs---T~GvFE~~I~ei~~ivH~~Gg~vY~DGA 242 (496)
T COG1003 171 PASAAMAGFKVVVVKC--DENGNVDLDDLRAKAE---DNLAALMITNPS---TLGVFEEDIREICEIVHEAGGQVYYDGA 242 (496)
T ss_pred hhhHhhcCceEEEEec--CCCCCccHHHHHHHhc---cceeEEEeccCc---ccccchhhHHHHHHHHHHcCCEEEecCc
Confidence 8888899999999999 4467799999999998 677788887665 3333467899999999999999999988
Q ss_pred C
Q 012238 271 Y 271 (467)
Q Consensus 271 y 271 (467)
-
T Consensus 243 N 243 (496)
T COG1003 243 N 243 (496)
T ss_pred c
Confidence 3
No 378
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.46 E-value=5.2e-05 Score=71.12 Aligned_cols=308 Identities=13% Similarity=0.111 Sum_probs=170.8
Q ss_pred hHHHHHHHHHHHhcCC---CCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhC----
Q 012238 103 LDVVKKAENLMLERGE---NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF---- 175 (467)
Q Consensus 103 ~~~v~~a~~~~~~~~~---~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~---- 175 (467)
.|.+.+++++-.+.-. ...|.. -..++.+-+++++.. +.+.. ++-|.+|.+.+..+...+.
T Consensus 77 hpki~~aLqeq~~kLtlssrafYnd--~~~~f~~~vt~lf~~--------~kvlp--mnTGaEa~Eta~KLaR~wgy~~K 144 (427)
T KOG1402|consen 77 HPKIIKALQEQADKLTLSSRAFYND--VLGEFAEYVTKLFGY--------DKVLP--MNTGAEAVETACKLARKWGYRKK 144 (427)
T ss_pred CHHHHHHHHHHHhHhhhhhHHHhhh--hHHHHHHHHHHhcCc--------ceeee--cccchhHHHHHHHHHHHHHHhhc
Confidence 5667777777654210 122322 234666667766432 35555 6777888888755554332
Q ss_pred --CCC-EEEE-cCCCCcc-hHHH---------HhhCCC----CeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCC
Q 012238 176 --PGA-KVLI-SSPTWGN-HKNI---------FNDARV----PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGC 237 (467)
Q Consensus 176 --~gd-~Vlv-~~P~y~~-~~~~---------~~~~G~----~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~ 237 (467)
|.+ .+++ ....|.+ ...+ .+.+|- .+..+|+ -|.+.|+.+++. +....+++-.
T Consensus 145 ~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~P~~~~~v~Y-------~d~eale~~l~~--~~vaaFivEP 215 (427)
T KOG1402|consen 145 NIPKNKAKILSAENNFHGRTLGAISLSTDPDSWDGFGPFLPGVVDKVPY-------GDAEALEVALKS--PNVAAFIVEP 215 (427)
T ss_pred cCCccceeEEEecccccCceeeeEEecCCcchhhccCCCCCCcceeecc-------CCHHHHHHHhcC--CCeeEEEeec
Confidence 433 2332 2233321 1111 111111 1222232 378899999985 5566666666
Q ss_pred CCCCCCCCCC-HHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCC-Cccce
Q 012238 238 AHNPTGIDPT-PEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYA-ERIGA 315 (467)
Q Consensus 238 p~NPTG~~~~-~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-~RiG~ 315 (467)
-+-.-|++.| +.-+++..++|++||+++|.||+-.++.-.+ ..+.. ...+-.++++++ .|.++ .| +.+..
T Consensus 216 IQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTG---k~la~-d~env~PDivil---gKalS-GG~~Pvsa 287 (427)
T KOG1402|consen 216 IQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTG---KLLAC-DYENVRPDIVIL---GKALS-GGVYPVSA 287 (427)
T ss_pred cccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcccccC---cEEEe-ehhhcCCCeEEE---ecccc-CCeeeeEE
Confidence 6777787665 4679999999999999999999966665432 11111 011112344433 46665 33 23344
Q ss_pred EEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 012238 316 MNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSL 395 (467)
Q Consensus 316 ~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l 395 (467)
+ .++.++.-. ++......+.+.++++.+++.++|+ +.. -+...++.++.-+.|+..|
T Consensus 288 v---l~~~~im~~------------~~pgeHgsTyggNpLg~~vaiAale---vi~-----eekL~era~~lG~~l~~~L 344 (427)
T KOG1402|consen 288 V---LADDDIMLN------------IKPGEHGSTYGGNPLGCAVAIAALE---VIV-----EEKLVERAAKLGEILRDQL 344 (427)
T ss_pred E---EecHHHHhc------------cCCCccccccCCChHHHHHHHHHHH---HHH-----HHHHHHHHHHHHHHHHHHH
Confidence 4 367766554 4444444445566677666666553 211 1356666777777788888
Q ss_pred hhccCC--CCCcccccCCcceEEecCC-----C-HHHHH--HHHHcccEEEeCCC----eEEec-cCChhhHHHHHHHHH
Q 012238 396 SAKDKS--GKDWSFILRQIGMFSFTGL-----N-KAQSD--NMTNKWHVYMTKDG----RISLA-GLSLAKCEYLADAII 460 (467)
Q Consensus 396 ~~~~g~--~~~~~~~~~~~g~f~~~~l-----~-~~~~~--~ll~~~gI~v~~gg----Ris~~-~~~~~~i~~~~~~l~ 460 (467)
. ++.. |+-.+..... |++.-+-+ + .+.+. ..+++.|++..|-+ |++-. .++++++++.+++|.
T Consensus 345 ~-~l~~~~p~~v~~VRGr-Gl~~ai~i~~~~~~~~~aw~~cl~lk~~g~LAkptH~~IiRfaPPL~I~e~dl~eg~e~i~ 422 (427)
T KOG1402|consen 345 N-KLQKKFPHVVKEVRGR-GLLNAIVINPSKTSGQDAWDVCLALKENGLLAKPTHGNIIRFAPPLVISEEDLREGIEAIE 422 (427)
T ss_pred H-hccccccchhheeecc-ceEEEEEeccccccchhHHHHHHcccccccccCCCCCCeEEecCCcccCHHHHHHHHHHHH
Confidence 7 6532 2212333333 45533211 1 22222 33455798888864 77643 358899999999999
Q ss_pred HHHH
Q 012238 461 DSYH 464 (467)
Q Consensus 461 ~~l~ 464 (467)
+++.
T Consensus 423 k~i~ 426 (427)
T KOG1402|consen 423 KTIA 426 (427)
T ss_pred HHhc
Confidence 8874
No 379
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.46 E-value=7.4e-06 Score=78.35 Aligned_cols=329 Identities=15% Similarity=0.078 Sum_probs=176.6
Q ss_pred CCCcEEecCcccCCCCCCCCchHHHHHHHHHHH--hcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCC
Q 012238 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLML--ERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 159 (467)
Q Consensus 82 ~~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~--~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g 159 (467)
+.+++||+...+..-.+.+.+-+.+...++..- ..+..--|+...-...+.+.||++++. ++.|+- +-
T Consensus 93 G~~~~N~aS~NfL~l~~~~~ike~a~~~lrkyGvGsCGPrGFYGt~DvHldlE~~iakF~G~-------E~aivY---s~ 162 (467)
T KOG1358|consen 93 GKDVLNFASANFLGLIENEEIKEEASFTLRKYGVGSCGPRGFYGTIDVHLDLEKRIAKFMGT-------EDAIVY---SY 162 (467)
T ss_pred CceeecccchhhhhhcccHHHHHHHHHHHHHhCCCCcCCCcccccceeecccHHHHHHhhCC-------cceeee---cc
Confidence 458899998776433333322333333343331 112223376666677899999999755 455655 33
Q ss_pred chhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCC------CC----
Q 012238 160 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP------GG---- 229 (467)
Q Consensus 160 gt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~------~~---- 229 (467)
|-.++..+ +-+...+||.|.+-.-.......-++...-.+.++.. .|+++++..+.+.. ++
T Consensus 163 gF~ti~S~--ipafsKrGDIi~~de~~nfaIq~GlqlSRS~i~~Fkh-------ndm~~lerll~E~~~~~~K~~k~~~~ 233 (467)
T KOG1358|consen 163 GFSTIESA--IPAFSKRGDIIFVDEAVNFAIQKGLQLSRSTISYFKH-------NDMEDLERLLPEQEDEDQKNPKKALT 233 (467)
T ss_pred ccchhhhc--chhhhccCcEEEEehhhhHHHHHHHhhhhheeEEecC-------CCHHHHHHhccCcchhhhhccccccc
Confidence 33344433 2334568998888776666566655555555555533 46777766654321 11
Q ss_pred cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHH--HHhcCCeEEEEecCccCcc
Q 012238 230 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRL--FATRGMELLVAQSYSKNLG 307 (467)
Q Consensus 230 ~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~--~~~~~~~~i~~~S~SK~~~ 307 (467)
.+.+++-.---+||.+.+.. +|+++..||...+|.||.|+.-..+. ....+.. -.+..+-.++++|++-.++
T Consensus 234 Rrfiv~EGl~~N~g~i~pl~---~iv~lk~Kyk~RvildEs~SfG~lg~---~GrGvteH~~v~~~~iDiv~~sm~~ala 307 (467)
T KOG1358|consen 234 RRFIVVEGLYANTGDICPLP---EIVKLKNKYKFRVILDESLSFGVLGK---TGRGVTEHFGVPITDIDIVTASMETALA 307 (467)
T ss_pred eEEEEEEeeccCCCcccccH---HHHHHHhhheEEEEEecccccccccc---cCccccccCCCCccceeeeeeccccccc
Confidence 23444444556788877755 77777999999999999987444331 1111111 1123456788999998887
Q ss_pred cCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCc--cC-CCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q 012238 308 LYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPM--YS-NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRI 384 (467)
Q Consensus 308 ~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~-~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~ 384 (467)
-.| |+. ++.. ++-. .+++.... ++ +.|+....++..++.- .+|+. .+.+.+
T Consensus 308 s~G---gFc---~G~~-~i~~------------hQrLSg~~Y~fSAslPp~la~aa~~ai~i----~~~~p---~~~~~L 361 (467)
T KOG1358|consen 308 SGG---GFC---AGKS-FIAD------------HQRLSGSGYCFSASLPPYLAGAAIKAILI----EEWNP---EIVQPL 361 (467)
T ss_pred ccC---cee---ecce-eeEe------------eeeccccceeeeccCchhhhhhHHHHHHH----HhhCc---chhhhh
Confidence 554 676 3643 3322 33332222 11 2333333333333221 11221 233344
Q ss_pred HHHHHHHHHHhhhccCCCCCcccccC-Ccc-eEEecCC---C--------HHHHHHHHHcccEEEeCC------------
Q 012238 385 KNVRQKLFDSLSAKDKSGKDWSFILR-QIG-MFSFTGL---N--------KAQSDNMTNKWHVYMTKD------------ 439 (467)
Q Consensus 385 ~~~r~~l~~~l~~~~g~~~~~~~~~~-~~g-~f~~~~l---~--------~~~~~~ll~~~gI~v~~g------------ 439 (467)
+.....+-+.|. ... .+.+... ... .++...- + .+.+++.+.+ ++.++..
T Consensus 362 ~~k~~~~H~~l~-~~s---~~~v~~~~~SPi~hl~l~~~~~s~e~e~~lL~eivd~~i~~-~~ll~~a~~~~~~e~~~~~ 436 (467)
T KOG1358|consen 362 RAKVAKFHAALS-SNS---GFIVSGSPESPIIHLQLERSYGSREKEEKLLEEIVDKCIAE-GVLLTRAKYLEKLERCPIP 436 (467)
T ss_pred hccccccchhhh-cCC---ceEEecCcCCceeeeeecccccchHHHHHHHHHHHHHHHhh-cceehhhhhhhhcccCCCC
Confidence 444444444444 221 0122111 111 1222211 1 2335555555 7777654
Q ss_pred -C-eEEec-cCChhhHHHHHHHHHHHHHhc
Q 012238 440 -G-RISLA-GLSLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 440 -g-Ris~~-~~~~~~i~~~~~~l~~~l~~~ 466 (467)
+ ||++. .+++++++++.+.|++....+
T Consensus 437 pSiri~~~a~~seeel~ra~~~ik~~~~~~ 466 (467)
T KOG1358|consen 437 PSIRICVSAGMSEEELERAAELIKEVASAV 466 (467)
T ss_pred CcEEEEEeCCCCHHHHHHHHHHHHHHHHhh
Confidence 1 99875 468999999999999886543
No 380
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=98.43 E-value=5.4e-05 Score=71.01 Aligned_cols=292 Identities=12% Similarity=0.040 Sum_probs=160.1
Q ss_pred HHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhC--CCCEEEEcCCC-Cc----chHHHHhhCCCCeEE
Q 012238 131 FNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF--PGAKVLISSPT-WG----NHKNIFNDARVPWSE 203 (467)
Q Consensus 131 lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~--~gd~Vlv~~P~-y~----~~~~~~~~~G~~~~~ 203 (467)
+-..+|-++... ++++++ +.+.+--++-. +.+.+. +|++|++++-. |+ .....++..|..
T Consensus 81 lgdklApLiGA~------~~Evvv--~dtts~nl~k~--L~aalr~~~~r~vIv~E~~~fpTdly~a~g~~~~~~~~--- 147 (407)
T COG3844 81 LGDKLAPLIGAR------AGEVVV--TDTTSINLFKV--LAAALRPQEGRRVIVSEGDNFPTDLYIAEGLADLLGIG--- 147 (407)
T ss_pred HHHHhhhhhcCC------CCceEE--eCCcchHHHHH--HHHHhccCCCceEEeecCCCCCcchhhhcchhhhhccc---
Confidence 334455554443 778888 77766666654 444454 68999998833 22 223344444433
Q ss_pred eeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCCh
Q 012238 204 YRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDA 283 (467)
Q Consensus 204 v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~ 283 (467)
+++ ...++++.+++.++ +.+.++++++.+.-||..++.. +|-+++.++|++++.|-+++--... .+-
T Consensus 148 ~~~----~~~~~P~~~~~~~~---dd~AvV~L~~V~y~TGql~dm~---aiT~~AH~~galv~wDLAHsaGavp-~~L-- 214 (407)
T COG3844 148 YDL----EGVIAPRALEEAIT---DDVAVVLLSHVNYKTGQLLDMR---AITALAHQHGALVGWDLAHSAGAVP-VDL-- 214 (407)
T ss_pred ccc----eeeeChHHHHHhhc---cceEEEEeccccccccceeeHH---HHHHHHHhcCceEEeehhcccCCcc-eee--
Confidence 222 23467888999888 6888999999999999998866 6666699999999999996533221 111
Q ss_pred hHHHHHHhcCCeEEEEecCccCcc-cCCCccceEEEecCCHHHHhhhhhhh------------HHHHHHHHHhhccCccC
Q 012238 284 SSVRLFATRGMELLVAQSYSKNLG-LYAERIGAMNVVCSSSDLAARCCEVA------------VIQVKSQLKRLARPMYS 350 (467)
Q Consensus 284 ~~~~~~~~~~~~~i~~~S~SK~~~-~~G~RiG~~~~v~~~~~~~~~~~~~~------------~~~~~~~l~~~~~~~~~ 350 (467)
....-.+-+++-.|.++ -||- ++++. ..++..++ .++- ....+.....+.+....
T Consensus 215 -------h~~gaDfaigcsyKYLNgGPGa-pa~l~---v~~~h~e~-~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~g 282 (407)
T COG3844 215 -------HAAGADFAIGCSYKYLNGGPGA-PAGLF---VAPRHRER-SWPPLSGWWGHARPFAMEEVYAPGPGARRFLCG 282 (407)
T ss_pred -------cccCCCeeeeeeceeccCCCCC-ceeEE---eccccccc-cccccccccCCCCcchhhhccCcCccccceeeC
Confidence 11123344555566553 1332 22222 11111111 0000 00000001112222334
Q ss_pred CCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCC-----cceEEecCCCHHHH
Q 012238 351 NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQ-----IGMFSFTGLNKAQS 425 (467)
Q Consensus 351 ~~~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~~-----~g~f~~~~l~~~~~ 425 (467)
+++.++..++...|.- .. .-.+.+.+++--...+++.+.++ ......++....|. |+-..+.--....+
T Consensus 283 t~~V~s~aal~~aLDi---fa--~~~i~~lR~kSlaLTd~fieLvE-a~~~~~~l~l~tPr~~~~rGsqvS~~hp~~~~V 356 (407)
T COG3844 283 TQPVLSLAALEGALDI---FA--DVDITELRKKSLALTDYFIELVE-ARCEYYGLTLVTPRAHEERGSQVSLYHPHGYQV 356 (407)
T ss_pred CcchhhhHHHhhhhhh---hh--hcCHHHHHHhhhHHHHHHHHHHH-hccccCCcEEeccchhhhccceeeEecCcHHHH
Confidence 5555555555444431 11 11256677777777888888776 43211123333332 22112222244555
Q ss_pred HHHHHcccEEEeCC--C--eEEeccC--ChhhHHHHHHHHHHHHHhc
Q 012238 426 DNMTNKWHVYMTKD--G--RISLAGL--SLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 426 ~~ll~~~gI~v~~g--g--Ris~~~~--~~~~i~~~~~~l~~~l~~~ 466 (467)
.+.|.++||...-- + |+.|+.+ +-+++=.+++.|.+++++.
T Consensus 357 ~qaLi~rGVigD~R~P~vlRfgftPlY~~~~DVw~AV~~L~evL~t~ 403 (407)
T COG3844 357 MQALIDRGVIGDFREPDVLRFGFTPLYVSFVDVWDAVDALEEVLDTL 403 (407)
T ss_pred HHHHHHcCccccccCCCeeeecCccceechhHHHHHHHHHHHHHHhh
Confidence 55555679875222 3 9888754 5588989999999998753
No 381
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=98.23 E-value=2.3e-06 Score=82.48 Aligned_cols=200 Identities=18% Similarity=0.169 Sum_probs=38.4
Q ss_pred CCchHHHHHHHHHHHhcCCCCcCCCCcchH-----HHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHh
Q 012238 100 PYVLDVVKKAENLMLERGENKEYLPIEGLA-----AFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY 174 (467)
Q Consensus 100 p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~-----~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~ 174 (467)
.++++.+.+++.+........+|.-..|-. .+.+.++.+ .+ .+..++ +++...|+.++ +..+
T Consensus 16 s~l~~~a~~a~~~~a~~Y~nLE~dl~~G~Rg~R~~~v~~ll~~l-tg-------AeaA~V--vNnnaAAv~L~---l~~l 82 (367)
T PF03841_consen 16 SPLSEEAIEAVAEVASGYSNLEYDLETGKRGSRYAHVEELLCEL-TG-------AEAALV--VNNNAAAVLLA---LNTL 82 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccc-cc-------cccccc--ccccccccccc---cccc
Confidence 334677777777765433334553322322 222233333 22 344455 68888888885 5566
Q ss_pred CCCCEEEEcCCCC------cchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCC--CCCC
Q 012238 175 FPGAKVLISSPTW------GNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT--GIDP 246 (467)
Q Consensus 175 ~~gd~Vlv~~P~y------~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPT--G~~~ 246 (467)
.+|.+|+++.-.- +...++++..|++++++-..+ .-.++++++++. ++|.+++-.++.|-. |..-
T Consensus 83 a~~~EvIvsRGelVeiGgsFRip~vm~~sGa~lvEVGttN----~t~~~Dye~AI~---e~Ta~ll~Vh~Sn~~i~GFt~ 155 (367)
T PF03841_consen 83 AKGKEVIVSRGELVEIGGSFRIPDVMRQSGARLVEVGTTN----RTHLSDYEKAIT---ENTAALLKVHTSNFRIQGFTG 155 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccccc----cccccccccccc---ccccccccccccccccccccc
Confidence 6788888876322 346678889999999997742 345778888898 677777766666653 4433
Q ss_pred CHHHHHHHHHHHHhcCCeeEEeccCCCCC----CCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecCC
Q 012238 247 TPEQWEKIADVIQEKNHIPFFDVAYQGFA----SGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 322 (467)
Q Consensus 247 ~~~~l~~l~~~~~~~~~~li~Deay~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~ 322 (467)
.+ .++++++++++||+++|+|..-..+. ++ . .+.+.+..+...+ -.++++|=.|.+|-| ..|.++ +.
T Consensus 156 ~~-~~~el~~la~~~~lp~i~DlgsG~l~dl~~~g-l-~~Ep~v~~~~~~G-aDlV~fSGdKlLGGP--QaGiI~---Gk 226 (367)
T PF03841_consen 156 EV-SLEELAELAKEHGLPVIVDLGSGLLVDLSPYG-L-PDEPTVQEYLAAG-ADLVTFSGDKLLGGP--QAGIIV---GK 226 (367)
T ss_dssp ------HHHHHHHHHT--EEEE-TTHHHHHHHTT------------CCCCT--SEEEEETTSSSSS---S-EEEE---EE
T ss_pred cc-cHHHHHHHHhhcCCcEEEECCCCCCcCccccc-C-ccccHHHHHhhcC-CCEEEEECCCcCCCC--CeEEEE---eC
Confidence 33 47788888999999999998831111 11 1 1122333333333 347788999998754 468874 99
Q ss_pred HHHHhh
Q 012238 323 SDLAAR 328 (467)
Q Consensus 323 ~~~~~~ 328 (467)
++++++
T Consensus 227 k~lI~~ 232 (367)
T PF03841_consen 227 KELIEK 232 (367)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999998
No 382
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=98.21 E-value=0.00041 Score=75.74 Aligned_cols=313 Identities=15% Similarity=0.171 Sum_probs=163.2
Q ss_pred EEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCc-----c----hHHHHHHHHHHHhCCCCcccccCceeeee
Q 012238 86 LNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIE-----G----LAAFNKVTAELLFGADNSVLKEQRVATVQ 156 (467)
Q Consensus 86 i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~-----G----~~~lr~aia~~l~~~~~~~~~~~~i~~~~ 156 (467)
.-++.|.| +. ..|+.+.+.+.+. .++...|.|.+ | +-++.+.++++..-. ..|.-+
T Consensus 67 ~fig~G~y----~~-~~p~~i~r~v~~~--p~~~TaytPyQ~EisQG~Le~l~e~Qt~i~eLtGm~------~aNaSl-- 131 (939)
T TIGR00461 67 SYIGMGYY----GT-ILPPVIQRNLLEN--PGWYTAYTPYQPEISQGRLEALLNFQTVVSDLTGLP------VANASL-- 131 (939)
T ss_pred ccCCCCcC----CC-cCChHHHHHHHhC--chhhhcCCCCChhhhhHHHHHHHHHHHHHHHHHCCC------hhhhhc--
Confidence 34467776 22 2366666554432 34446677643 3 456667777774222 345545
Q ss_pred cCCchhHHHHHHHHHHHh-CCCCEEEEcCCCCcchHHHHh----hCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcE
Q 012238 157 GLSGTGSLRLAAALIERY-FPGAKVLISSPTWGNHKNIFN----DARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSF 231 (467)
Q Consensus 157 t~ggt~al~l~~~~l~~~-~~gd~Vlv~~P~y~~~~~~~~----~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~ 231 (467)
..++|.+.+.+.+....- .++++|+|++-.++.+...++ ..|++++.++. +.+++.+ .+.
T Consensus 132 ~d~atA~aEa~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~~~----------~~l~~~~-----~~~ 196 (939)
T TIGR00461 132 LDEGTAAAEAMALSFNVSKKKANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVVDC----------SDIKKAV-----DVF 196 (939)
T ss_pred cchhhHHHHHHHHHHHhhcCCCCEEEECCCCCcchHHHHHHHHHhcCcEEEEEcH----------HHHhhcC-----CEE
Confidence 677888777652221111 134899999999988876555 77888777643 3444333 345
Q ss_pred EEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccC--
Q 012238 232 ILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY-- 309 (467)
Q Consensus 232 ~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~-- 309 (467)
.+++.+|+ -.|.+. ++++|+++++++|.+++++.--..+.- + .++ -+.+-+ |++++ +|.||.|
T Consensus 197 ~v~~q~Pn-~~G~ie---d~~~i~~~~h~~gal~~~~ad~~al~l--l-~~P------ge~GaD-i~vg~-~q~fg~p~g 261 (939)
T TIGR00461 197 GCLLQYPA-TDGSIL---DYKQLIDALHSHKSLVSVAADLMALTL--L-TPP------GHYGAD-IVLGS-SQRFGVPMG 261 (939)
T ss_pred EEEEECCC-CCeEEe---cHHHHHHHHHHcCCEEEEEechHHhCC--c-CCH------HHcCCc-EEeeC-CCccCCCCC
Confidence 66666664 567764 578899999999999998543111111 0 110 122334 43554 3444432
Q ss_pred --CCccceEEEecCCHHHHhh----------hhhh--hH---HHHHHH-HHhhccCccCCCchHHHHHHHHHhCChhhHH
Q 012238 310 --AERIGAMNVVCSSSDLAAR----------CCEV--AV---IQVKSQ-LKRLARPMYSNPPVHGARIVANVVGNPALFD 371 (467)
Q Consensus 310 --G~RiG~~~~v~~~~~~~~~----------~~~~--~~---~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~ 371 (467)
|--.|++. ..+++++. |.+. ++ .+-+.| +++-.. ++|.-. .|...+ ... .++-
T Consensus 262 ~GGP~aG~~a---~~~~l~r~lPgrivG~s~D~~G~~~~~l~LqtReqhIrRekA--tSNICt-~qaL~a-~~a--~~Y~ 332 (939)
T TIGR00461 262 YGGPHAAFFA---VKDEYNRKMPGRIVGVSKDALGNTALRLALQTREQHIRRDKA--TSNICT-AQVLLA-NVA--SSYC 332 (939)
T ss_pred CCCCceeeee---ecHhhHhhCCCCceeEEecCCCCccceeeccccccccccccc--CcchhH-HHHHHH-HHH--HHHH
Confidence 33356663 33333332 0000 00 000000 111111 111100 111111 000 0000
Q ss_pred HH--HHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceE--EecC---CCHHH-HHHHHHcccEEEeCCC---
Q 012238 372 EW--KAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMF--SFTG---LNKAQ-SDNMTNKWHVYMTKDG--- 440 (467)
Q Consensus 372 ~~--~~~l~~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~~~g~f--~~~~---l~~~~-~~~ll~~~gI~v~~gg--- 440 (467)
.| .+.++++.++...+..++.+.|. +.|+ +...+ .|| +.+. .+.+. .+++++ +||.+...+
T Consensus 333 ~~~G~~GL~~iA~~~~~~a~~l~~~L~-~~G~----~~~~~--~fF~~~~v~~~~~~~~~i~~~~~~-~gi~l~~~~~~~ 404 (939)
T TIGR00461 333 VYHGPKGLKNIARRIHSLTSILANGLE-NDPH----ELINK--TWFDTLTVKVGNGISSELLKAAEE-FNINLRAVDTTT 404 (939)
T ss_pred HHHCHHHHHHHHHHHHHHHHHHHHHHH-hCCC----cccCC--CccceEEEEeCCCCHHHHHHHHHH-CCCeeeecCCCE
Confidence 01 34577888888888899999999 7773 44333 334 1122 23344 555554 699887542
Q ss_pred -eEEeccC-ChhhHHHHHHHHH
Q 012238 441 -RISLAGL-SLAKCEYLADAII 460 (467)
Q Consensus 441 -Ris~~~~-~~~~i~~~~~~l~ 460 (467)
++|+... ++++++.+++.+.
T Consensus 405 i~~s~~E~~t~~di~~l~~~~~ 426 (939)
T TIGR00461 405 VGIALDETTTKADVENLLKVFD 426 (939)
T ss_pred EEEEeecCCCHHHHHHHHHHhc
Confidence 7777654 6688999998884
No 383
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=98.13 E-value=0.00023 Score=66.02 Aligned_cols=279 Identities=13% Similarity=0.136 Sum_probs=145.2
Q ss_pred ceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHH-h------hCCC-----CeEEe-eeecCCC--CC--
Q 012238 151 RVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF-N------DARV-----PWSEY-RYYDPKT--VG-- 213 (467)
Q Consensus 151 ~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~-~------~~G~-----~~~~v-~~~~~~~--~~-- 213 (467)
-+++ +++|++|..+++++...+..-..|++.+-.|.++.... + ..|. +++.+ |+.+--. +.
T Consensus 104 vc~F--~NSGSEANDLALRLAR~ftkhqDvItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~~ 181 (452)
T KOG1403|consen 104 VCFF--VNSGSEANDLALRLARNFTKHQDVITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRDK 181 (452)
T ss_pred EEEE--ecCCchhhHHHHHHHHhhcccCceEEEechhccceeeeeeccceeccCCCCcCCCceeEecCCccccccccccc
Confidence 3455 89999999999777666665555777776665543221 1 1111 12222 2211000 00
Q ss_pred ---------CChhhHHHHHHc---CCCCcEEEEeCCCCCCCCCCCCHH-HHHHHHHHHHhcCCeeEEeccCCCCCCCCCC
Q 012238 214 ---------LDFEGMIADIKA---APGGSFILLHGCAHNPTGIDPTPE-QWEKIADVIQEKNHIPFFDVAYQGFASGSLD 280 (467)
Q Consensus 214 ---------~d~~~l~~~l~~---~~~~~~~i~i~~p~NPTG~~~~~~-~l~~l~~~~~~~~~~li~Deay~~~~~~~~~ 280 (467)
.=-+.+++.+++ ...+...++--+-+.--|.++|++ ..+++++..+.+|-+.|.||+--+|.- ..
T Consensus 182 ~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGR--vG 259 (452)
T KOG1403|consen 182 MYPDADMGALYADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGR--VG 259 (452)
T ss_pred cCCcccchhhhhhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcccc--cc
Confidence 111334444432 122333444344455567766664 578899999999999999999666653 22
Q ss_pred CChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHHHHHH
Q 012238 281 NDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHGARIV 360 (467)
Q Consensus 281 ~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 360 (467)
...|..... .--+++ -.+.|-+| .|..++.++ ..+++.++ |...-..+.. +.+.++.+.++.
T Consensus 260 ~hyWafq~y-~fiPDI---VtmgKpmG-NGhPVa~Va---ttkeIA~A--------f~atgv~YFN--TyGGnPVsCAv~ 321 (452)
T KOG1403|consen 260 SHYWAFQTY-NFIPDI---VTMGKPMG-NGHPVAAVA---TTKEIAQA--------FHATGVEYFN--TYGGNPVSCAVG 321 (452)
T ss_pred hhhhhhhhh-ccccch---heecccCC-CCCeeeEEe---ccHHHHHH--------hccccceehh--ccCCCchhHHHH
Confidence 344543211 111232 34679998 899999985 77777777 3331111111 223344455555
Q ss_pred HHHhC---ChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccC--CcceEEecCC---------CHH---
Q 012238 361 ANVVG---NPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR--QIGMFSFTGL---------NKA--- 423 (467)
Q Consensus 361 ~~~L~---~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~--~~g~f~~~~l---------~~~--- 423 (467)
.+.|+ ++. ..+..++.-+.|...|+ ++... ...+.. ..|.|+=+++ +.+
T Consensus 322 laVm~v~e~E~-----------Lq~ha~~vG~~L~~lL~-~~k~k--h~~IGDvRGvGLFiGIdLVkD~~tRtP~tk~A~ 387 (452)
T KOG1403|consen 322 LAVMRVCEDEN-----------LQEHAQQVGEKLEVLLR-RLKQK--HECIGDVRGVGLFIGIDLVKDRKTRTPDTKEAH 387 (452)
T ss_pred HHHHHHHhhhh-----------HHHHHHHHHHHHHHHHH-HHhhh--ccceeccccceEEEeeeeecccccCCCcHHHHH
Confidence 54443 322 22222222333333333 22110 122222 2355543333 112
Q ss_pred -HHHHHHHcccEEEeCCC--e--EEe---ccCChhhHHHHHHHHHHHHHh
Q 012238 424 -QSDNMTNKWHVYMTKDG--R--ISL---AGLSLAKCEYLADAIIDSYHN 465 (467)
Q Consensus 424 -~~~~ll~~~gI~v~~gg--R--is~---~~~~~~~i~~~~~~l~~~l~~ 465 (467)
.+.+|.+.++|++...| | +-+ -+.++++.++.+..|.+++..
T Consensus 388 ~~v~rlke~y~VLlsaDGPh~NilKiKPPmCFneena~e~v~~ld~iLT~ 437 (452)
T KOG1403|consen 388 WVVNRLKELYRVLLSADGPHRNILKIKPPMCFNEENADEFVLGLDEILTV 437 (452)
T ss_pred HHHHHHHHhhhEEEecCCCCCceeecCCCcccChhhHHHHHHHHHHHHHH
Confidence 24577777899998886 1 111 112678888888888888753
No 384
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=98.10 E-value=0.0011 Score=63.69 Aligned_cols=292 Identities=17% Similarity=0.142 Sum_probs=145.6
Q ss_pred hHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchH-HHHhhCCCCeEEeee
Q 012238 128 LAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHK-NIFNDARVPWSEYRY 206 (467)
Q Consensus 128 ~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~-~~~~~~G~~~~~v~~ 206 (467)
..+.++.+.++|.-.. .-+|+++ -.|+|+.+..+ .+.++.+...-.+-.-.|.... .-++..+..+.....
T Consensus 52 ~~~a~~~lreLl~iPd-----~Y~Vlfl-qGGat~qf~~~--p~nLl~~~~~~yv~~g~Ws~~a~~eA~~~~~~~~~~~~ 123 (365)
T COG1932 52 LEEAEKDLRELLNIPD-----DYKVLFL-QGGATGQFAMA--PMNLLGKRGTDYVDTGAWSEFAIKEAKKVGKQPKLIDA 123 (365)
T ss_pred HHHHHHHHHHHhCCCC-----CceEEEE-cCccHHHHHHH--HHhhhcccCceeEeeeehhHhHHHHHHHhccccccccc
Confidence 3445555666654321 1156662 35667777766 4555543322034445554332 233444432222211
Q ss_pred e-cCC--CCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCCh
Q 012238 207 Y-DPK--TVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDA 283 (467)
Q Consensus 207 ~-~~~--~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~ 283 (467)
. .+. +.-++++... +. ++...+..|.-+.-+|+-++. ...+ . .+.++|.|.. +.+.... .|.
T Consensus 124 ~~~~~~~~~iP~~~~~~--~~---~~~ayv~~~~NeTi~Gv~v~~--~p~~---~--~~~~~v~D~S-S~ilsr~--iDv 188 (365)
T COG1932 124 RIEEAGYGSIPDLSKWD--FS---DNDAYVHFCWNETISGVEVPE--LPDI---G--SDGLLVADAS-SAILSRP--IDV 188 (365)
T ss_pred ceeccCccCCCChhhcc--cC---CCccEEEEecCCcccceEccC--CCCC---C--CCceEEEecc-cHHhcCC--CCh
Confidence 1 122 2234444332 22 222223334333344765552 1112 1 1267888887 3333222 222
Q ss_pred hHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecCCHHHHhhhhhhh-HHHHHHHHHhh-ccCccCCCchHHHHHHH
Q 012238 284 SSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARCCEVA-VIQVKSQLKRL-ARPMYSNPPVHGARIVA 361 (467)
Q Consensus 284 ~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~-~~~~~~~l~~~-~~~~~~~~~~~~~~~~~ 361 (467)
. .-.++..|.-|++|..| ++.++ -.++++++ ++.. .+.+....... ...++..||.++-....
T Consensus 189 s---------k~dviyagaQKnlGpaG--ltvvI---vr~~~l~r-~~~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~ 253 (365)
T COG1932 189 S---------KYDVIYAGAQKNLGPAG--LTVVI---VRPDLLER-AESYTLPSIFDYLTHADNGSMYNTPPTFAWYLLG 253 (365)
T ss_pred h---------HcceEEEehhhccCccc--eEEEE---EcHHHHhc-ccccCCchHhhchhhhccCCccCCcHHHHHHHHH
Confidence 1 12466788999999888 56664 56777776 1111 22222222222 22334445554433332
Q ss_pred HHhCChhhHHHHHHH---HHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceEEec-----CCCHHHHHHHHHccc
Q 012238 362 NVVGNPALFDEWKAE---MEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFT-----GLNKAQSDNMTNKWH 433 (467)
Q Consensus 362 ~~L~~~~~~~~~~~~---l~~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~~~g~f~~~-----~l~~~~~~~ll~~~g 433 (467)
..+ +|... ++.+.++-+++.+.|++.+. +.++-...-......-+-+.+ .++..++.++.+ +|
T Consensus 254 lv~-------~Wlk~~GGl~~~~~rn~~ka~~LY~~id-~s~fy~~~v~~~~RS~mnV~f~~~~~~ld~~fv~eae~-~g 324 (365)
T COG1932 254 LVF-------KWLKSQGGLEALEARNQAKAQLLYDWID-KSDFYRNLVAKANRSRMNVTFTLVDAELDKGFVAEAEA-AG 324 (365)
T ss_pred HHH-------HHHHHcCCHHHHHHHHHHHHHHHHHHHH-hCCccccccchhhccceeEEEEcCcHHHHHHHHHHHHH-cC
Confidence 222 23322 67888888899999999998 655311000001122222222 235556666655 47
Q ss_pred EEEeCC-----C-eEEecc-CChhhHHHHHHHHHHHHHhc
Q 012238 434 VYMTKD-----G-RISLAG-LSLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 434 I~v~~g-----g-Ris~~~-~~~~~i~~~~~~l~~~l~~~ 466 (467)
+....| | |+|+.. ++.++++.+++-+++..++.
T Consensus 325 l~~lkGhr~vgGmRasiynA~~~e~veaL~~fm~~f~~~~ 364 (365)
T COG1932 325 LIYLKGHRSVGGLRASIYNAVPLEDVEALTDFMDWFEETY 364 (365)
T ss_pred CceeccccCCCceeeeeecCCCHHHHHHHHHHHHHHHHhh
Confidence 766665 4 999754 58899999999998887653
No 385
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=98.02 E-value=0.0027 Score=63.54 Aligned_cols=318 Identities=15% Similarity=0.156 Sum_probs=143.4
Q ss_pred CcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCC-----Ccc----hHHHHHHHHHHHhCCCCcccccCceee
Q 012238 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLP-----IEG----LAAFNKVTAELLFGADNSVLKEQRVAT 154 (467)
Q Consensus 84 ~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~-----~~G----~~~lr~aia~~l~~~~~~~~~~~~i~~ 154 (467)
..--++.|.| .. .+|+.+.+.+.+ ...+...|.| .+| +-++...++++. + .+ ..|.-+
T Consensus 66 ~~~fiG~G~y----~~-~~P~~i~~~i~~--~~ef~TaYtPYQpEisQG~Lq~lfe~Qs~i~eLT-G---md--vaNaSl 132 (429)
T PF02347_consen 66 YTSFIGAGSY----TH-YVPAVIDRNILS--RPEFYTAYTPYQPEISQGRLQALFEYQSMICELT-G---MD--VANASL 132 (429)
T ss_dssp TTS---CTTT----------HHHHH-HHC--CHHCCCS-STTSGGGBHHHHHHHHHHHHHHHHHH-T---SS--EE-SEB
T ss_pred CCcccccccc----Cc-eeChhhcCcccc--ChhhhccCCCCCcHHHHHHHHHHHHHHHHHHHhh-C---CC--ccCCCC
Confidence 3344566666 22 335555442222 1233356666 334 455666677773 2 22 123333
Q ss_pred eecCCchhHHHHHHHHHHHhC-CCCEEEEcCCCCcchHHHHh----hCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCC
Q 012238 155 VQGLSGTGSLRLAAALIERYF-PGAKVLISSPTWGNHKNIFN----DARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGG 229 (467)
Q Consensus 155 ~~t~ggt~al~l~~~~l~~~~-~gd~Vlv~~P~y~~~~~~~~----~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 229 (467)
-.|++..-+.+.+...... ..++|+++.-.++.+...++ ..|.+++.++..+ +...| .++
T Consensus 133 --yd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv~~~~~~--~~~~d-----------~~~ 197 (429)
T PF02347_consen 133 --YDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAVLRTYAAPLGIEIVEVPLDE--DGTTD-----------DDD 197 (429)
T ss_dssp --SSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHHHHHHCCHCCEEEEEE-BBT--TCSB------------STT
T ss_pred --CChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHHHHHhhhhCCeEEEEecccc--cCCcc-----------ccC
Confidence 4677776666533332322 34699999999998887544 5788888888742 23334 267
Q ss_pred cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccC
Q 012238 230 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY 309 (467)
Q Consensus 230 ~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~ 309 (467)
+..+++.+|| -.|.+- ++++|+++++++|.++++ .+ -...-+... .-.+.+-+ |++++ +|.||.|
T Consensus 198 ~a~v~vq~Pn-~~G~~e---d~~~i~~~~h~~gal~~~-~a-d~~aL~~l~-------~Pge~GAD-I~vg~-~Q~fg~p 262 (429)
T PF02347_consen 198 TAAVMVQNPN-TFGVFE---DIKEIADIAHAAGALVIV-GA-DPNALGGLK-------SPGEYGAD-IVVGE-HQTFGIP 262 (429)
T ss_dssp EEEEEEESS--TTSB-----THHHHHHHHHHTT-EEEE-CG-GCCGCCTC---------GGGGT-S-EEEEC-CTTTT--
T ss_pred eEEEEeecCC-CCceEe---eHHHHHHHHHHcCCEEEE-ec-CHHHHhCcC-------ChhhcCcc-EEeeC-CCCCccc
Confidence 7888888775 356643 388999999999988886 33 222222110 11123334 44766 7877754
Q ss_pred ----CCccceEEEecCCHHHHhh----------hhhh--h----HHHHHHHHHhhccCccCCCch-H-HHHHHHHHhCCh
Q 012238 310 ----AERIGAMNVVCSSSDLAAR----------CCEV--A----VIQVKSQLKRLARPMYSNPPV-H-GARIVANVVGNP 367 (467)
Q Consensus 310 ----G~RiG~~~~v~~~~~~~~~----------~~~~--~----~~~~~~~l~~~~~~~~~~~~~-~-~~~~~~~~L~~~ 367 (467)
|--.|++. ..++++.. |.+. + +-.=..++++-+.....+.+. + +..++..+...+
T Consensus 263 ~~~GGP~~G~~a---~~~~l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKAtSNIctnqaL~A~~a~~Yl~~~G 339 (429)
T PF02347_consen 263 MGFGGPGAGFFA---VREDLVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKATSNICTNQALLALAAAIYLAYLG 339 (429)
T ss_dssp -CCC-S--EEEE---E-GGGGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCSTT---SS-HHHHHHHHHHHHHHH
T ss_pred CCCCCCCeeeEE---EhhhhhhhCCCceecccccccccceeeeccccccccccccchhhhhhhhHHHHHHHHHHHHHHhC
Confidence 33356663 33333332 0000 0 000001122222111112222 1 111111111111
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceEEec--CCCHHHHHHHHHc---ccEEEeCC--C
Q 012238 368 ALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFT--GLNKAQSDNMTNK---WHVYMTKD--G 440 (467)
Q Consensus 368 ~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~~~g~f~~~--~l~~~~~~~ll~~---~gI~v~~g--g 440 (467)
.+.+++..++...+..++.+.|. +... ..+ ...-||-++ ....+.+.+++++ .|+....- +
T Consensus 340 ------~~GL~~iA~~~~~~A~yl~~~L~-~~~~---~~~--~~~~f~e~v~~~~~~~~~~~l~~~~~~~gl~~~~~~~~ 407 (429)
T PF02347_consen 340 ------PEGLREIAERIHLNAHYLAERLK-KIYG---LPF--DNPFFFEFVVVFSKDKEVEELLKRGIEGGLNLRYPDDG 407 (429)
T ss_dssp ------HHHHHHHHHHHHHHHHHHHHHHC-CTTB---ECS--SSSSBSSEEEEESS-HHHHHHHHTT----EEEGGG-SS
T ss_pred ------HHHHHHHHHHHHHHHHHHHHHHH-HhcC---ccc--CCCCceeeeeecCCcHHHHHHHHHHHhcCCCccccCCC
Confidence 46688999999999999999999 6521 222 222343222 2222334444443 35443221 2
Q ss_pred e--EEeccC-ChhhHHHHHHHH
Q 012238 441 R--ISLAGL-SLAKCEYLADAI 459 (467)
Q Consensus 441 R--is~~~~-~~~~i~~~~~~l 459 (467)
. ||+... ++++++.+++++
T Consensus 408 ~~li~~TE~~t~edid~lv~~f 429 (429)
T PF02347_consen 408 ALLICVTETRTKEDIDRLVEAF 429 (429)
T ss_dssp EEEEE--TT--HHHHHHHHH--
T ss_pred eEEEEccCCCCHHHHHHHHhcC
Confidence 3 444432 567888887754
No 386
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=97.75 E-value=0.036 Score=54.51 Aligned_cols=321 Identities=12% Similarity=0.150 Sum_probs=164.4
Q ss_pred EecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCC-----cc----hHHHHHHHHHHHhCCCCcccccCceeeeec
Q 012238 87 NLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPI-----EG----LAAFNKVTAELLFGADNSVLKEQRVATVQG 157 (467)
Q Consensus 87 ~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~-----~G----~~~lr~aia~~l~~~~~~~~~~~~i~~~~t 157 (467)
-++.|.| +. ++|+.|.+.+.+ +..+...|+|. +| +-++...++++. |.++. |--+ -
T Consensus 79 fiG~GyY----~~-~~P~vI~rnile--~pewyTaYTPYQpEISQGrLqaLfefQtlv~dLT----Gm~VA--NASm--~ 143 (450)
T COG0403 79 FIGAGYY----DT-YTPPVILRNILE--NPEWYTAYTPYQPEISQGRLEALFEFQTLVADLT----GLDVA--NASM--L 143 (450)
T ss_pred hccCccc----CC-cCcHHHHHHhhc--CccccccCCCCchhhhhHHHHHHHHHHHHHHHHh----CCCcc--cchh--h
Confidence 5677777 32 346666644433 34556778773 33 445666666663 22222 3323 4
Q ss_pred CCchhHHHHHHHHHHHhC--CCCEEEEcCCCCcchHHHHh----hCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcE
Q 012238 158 LSGTGSLRLAAALIERYF--PGAKVLISSPTWGNHKNIFN----DARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSF 231 (467)
Q Consensus 158 ~ggt~al~l~~~~l~~~~--~gd~Vlv~~P~y~~~~~~~~----~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~ 231 (467)
-++|.+-+.+.+.. ... +..+++|+.-+|+.+...++ -.|.+++.++.+ |.+.+++. .. ..+.
T Consensus 144 DeaTAaAEAm~ma~-r~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~-------d~~~l~~~-~~--~~~~ 212 (450)
T COG0403 144 DEATAAAEAMLMAK-RVTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDAD-------DLDDLESA-DD--GDVF 212 (450)
T ss_pred hhHHHHHHHHHHHH-HhhcCcCceEEecCCCCHHHHHHHHhhcccCceEEEEeccc-------hhhhhhhc-cc--cCeE
Confidence 67777777653222 333 35899999999999988776 345566655541 67777776 32 4556
Q ss_pred EEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhc--CCeEEEEecCcc---Cc
Q 012238 232 ILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR--GMELLVAQSYSK---NL 306 (467)
Q Consensus 232 ~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~S~SK---~~ 306 (467)
.+++-+ |...-....++.+|.+.++++|.++++=. + +.++-.+... ..-.|++++-.- -+
T Consensus 213 gv~vQy---P~~~G~~~~d~~~l~~~~h~~~al~~v~a---D---------plaL~LL~pPGe~GADIvvG~~QrfGvPm 277 (450)
T COG0403 213 GVLVQY---PNTFGIVEEDLRALIEAAHSAGALVIVAA---D---------PLALGLLKPPGEFGADIVVGSAQRFGVPM 277 (450)
T ss_pred EEEEec---CCCCCccchhHHHHHHHHhhcCCEEEEEe---c---------hhHhhccCCccccCCceEEecCcccCCCc
Confidence 666544 44433456679999999999998776521 1 1111111111 123566666443 22
Q ss_pred ccCCCccceEEEecCCHHHHhh----------hhh--hhH---HHH-HHHHHhhccCccCCCchHHHHHHHHHhCChhhH
Q 012238 307 GLYAERIGAMNVVCSSSDLAAR----------CCE--VAV---IQV-KSQLKRLARPMYSNPPVHGARIVANVVGNPALF 370 (467)
Q Consensus 307 ~~~G~RiG~~~~v~~~~~~~~~----------~~~--~~~---~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~~~~ 370 (467)
|..|-..||.. ..+++.+. |.+ .++ .+= ..++++-+.....+.+......++ .++
T Consensus 278 gfGGPhag~fA---~~~~~~R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIRReKATSNICTnQaLlA~~A------s~y 348 (450)
T COG0403 278 GFGGPHAGYFA---VKDEFKRQMPGRLVGVSVDAAGKRAFRLALQTREQHIRREKATSNICTNQALLALAA------SMY 348 (450)
T ss_pred CCCCcceeeee---EhHhHhhcCCCceeeeeecCCCCchhhhhHHHHHHHHhhhccchhhhHHHHHHHHHH------HHH
Confidence 33355567774 22333222 000 000 000 111222222111122111101111 111
Q ss_pred HHH--HHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccCCcceEE--ecCCCHHHHHHHHH---cccEEEeCC--Ce
Q 012238 371 DEW--KAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFS--FTGLNKAQSDNMTN---KWHVYMTKD--GR 441 (467)
Q Consensus 371 ~~~--~~~l~~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~~~g~f~--~~~l~~~~~~~ll~---~~gI~v~~g--gR 441 (467)
.-| .+.+.++.++..+...++.+.|+ +.+. +++.... .||- .+.+..+....+++ ..|+-+..- ++
T Consensus 349 ~~~hGp~GLk~iA~r~~~~a~~la~~L~-~~~~--g~~~~~~--~fFdt~~v~~~~~~~~~l~~~~~~~G~~L~~~~~~~ 423 (450)
T COG0403 349 AVYHGPQGLKEIAERIHRLAAYLAAGLK-EIGA--GVELVFD--HFFDTFTVRVPEEVAEALLAAAIAGGINLRRVDADT 423 (450)
T ss_pred HHHhChHHHHHHHHHHHHHHHHHHHHHh-hcCC--ceEeccc--cceeeEEEecchhHHHHHHHHHHhcCCceeeecCCc
Confidence 111 35688899999999999999998 7652 1333322 4552 23443233333332 246655443 24
Q ss_pred EEec--cC-ChhhHHHHHHHHHHH
Q 012238 442 ISLA--GL-SLAKCEYLADAIIDS 462 (467)
Q Consensus 442 is~~--~~-~~~~i~~~~~~l~~~ 462 (467)
+.++ .. ++++++.+++++...
T Consensus 424 ~~ia~tEt~t~~~i~~l~~~~~~~ 447 (450)
T COG0403 424 VLIALTETTTKEDIDALVAAFGGV 447 (450)
T ss_pred eEEEeecccCHHHHHHHHHHHhhh
Confidence 4443 22 467888888777654
No 387
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=97.73 E-value=0.00086 Score=65.94 Aligned_cols=151 Identities=13% Similarity=0.034 Sum_probs=97.3
Q ss_pred CcCCCCcchHHHHHHHHHHHhCCCCccc------ccCceeeeecCCchhHHHHHHHHHHH-------hCCC---------
Q 012238 120 KEYLPIEGLAAFNKVTAELLFGADNSVL------KEQRVATVQGLSGTGSLRLAAALIER-------YFPG--------- 177 (467)
Q Consensus 120 ~~Y~~~~G~~~lr~aia~~l~~~~~~~~------~~~~i~~~~t~ggt~al~l~~~~l~~-------~~~g--------- 177 (467)
+.+...+-..||..-+.+||....+.+. ..+...++| ..++++..++ +++. +..+
T Consensus 103 FtW~ssPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ-~tases~lva--llaaR~~~i~~~k~~~p~~~e~~~ 179 (511)
T KOG0628|consen 103 FTWASSPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQ-GTASESVLVA--LLAARTEKIEEIKSRPPELHESSV 179 (511)
T ss_pred ceeecCcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEe-cCcchhHHHH--HHHHHHHHHHHhhcCCCcccchhh
Confidence 3444556678899888888865433211 011122222 3345555554 2221 1122
Q ss_pred --C-EEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCC---CCcEEEEeCCCCCCCCCCCCHHHH
Q 012238 178 --A-KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP---GGSFILLHGCAHNPTGIDPTPEQW 251 (467)
Q Consensus 178 --d-~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~---~~~~~i~i~~p~NPTG~~~~~~~l 251 (467)
+ .+..++-+.......+...|++...++.+ .+++++.+.|.+++++.- -.+.+++.+-. |-.+-.-+++
T Consensus 180 ~~~lV~Y~SDqahssveka~~i~~VklR~l~td--~n~~mr~~~L~~AIe~D~arGlIPf~v~at~G---TT~~ca~D~l 254 (511)
T KOG0628|consen 180 LARLVAYCSDQAHSSVEKACLIAGVKLRALPTD--ENFGMRGDTLRKAIEEDIARGLIPFFVCATLG---TTSSCAFDEL 254 (511)
T ss_pred hhhheEEecCcccchHHHhHhhcceeEEEeecc--cCcCCCHHHHHHHHHHHHhCCCccEEEEEeec---CccccccccH
Confidence 1 34555677778888888899999999984 389999999999998731 22344443322 2233446789
Q ss_pred HHHHHHHHhcCCeeEEeccCCCCCCCC
Q 012238 252 EKIADVIQEKNHIPFFDVAYQGFASGS 278 (467)
Q Consensus 252 ~~l~~~~~~~~~~li~Deay~~~~~~~ 278 (467)
.+|..+|+++|+|+.+|.+|.+-.+..
T Consensus 255 ~elg~Vc~~~glWLHVDAAYAGsa~iC 281 (511)
T KOG0628|consen 255 EELGPVCREEGLWLHVDAAYAGSAFIC 281 (511)
T ss_pred HHhcchhhhcCEEEEeehhhccccccC
Confidence 999999999999999999999887754
No 388
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=97.49 E-value=0.013 Score=57.42 Aligned_cols=87 Identities=14% Similarity=0.072 Sum_probs=61.7
Q ss_pred EcCCCCcchHHHHhhCC---CCeEEeeeecCCCCCCChhhHHHHHHcCCCC---cEEEEeCCCCCCCCCCCCHHHHHHHH
Q 012238 182 ISSPTWGNHKNIFNDAR---VPWSEYRYYDPKTVGLDFEGMIADIKAAPGG---SFILLHGCAHNPTGIDPTPEQWEKIA 255 (467)
Q Consensus 182 v~~P~y~~~~~~~~~~G---~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~---~~~i~i~~p~NPTG~~~~~~~l~~l~ 255 (467)
.++-++......+..+| -.++.|++ ++.+.+++++|++.|.....+ +.++-.+....--|. -+++..|+
T Consensus 202 tSeesHYSi~kaAa~lg~gtd~c~~v~t--~e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GA---FDdL~~ia 276 (510)
T KOG0629|consen 202 TSEESHYSIKKAAAFLGLGTDHCIKVKT--DERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGA---FDDLNGIA 276 (510)
T ss_pred ecccchhhHHHHHHHhccCCceeEEecc--cccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeec---cCcHHHHH
Confidence 33456667777888888 46777777 456789999999999764333 344433333333344 46677899
Q ss_pred HHHHhcCCeeEEeccCCC
Q 012238 256 DVIQEKNHIPFFDVAYQG 273 (467)
Q Consensus 256 ~~~~~~~~~li~Deay~~ 273 (467)
++|++|++|+.+|.+|.+
T Consensus 277 diC~k~~lWmHvDAAwGG 294 (510)
T KOG0629|consen 277 DICEKHKLWMHVDAAWGG 294 (510)
T ss_pred HHHHhcCEEEEeeccccc
Confidence 999999999999999877
No 389
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=97.41 E-value=0.0029 Score=57.80 Aligned_cols=181 Identities=15% Similarity=0.091 Sum_probs=102.5
Q ss_pred HhhCCCCeEEee-eecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCC
Q 012238 194 FNDARVPWSEYR-YYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ 272 (467)
Q Consensus 194 ~~~~G~~~~~v~-~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~ 272 (467)
+-.+|.+++.+. ..+.+...-|++.+++.+++..+.-.+.++++ ...=..-+++.+++|+.+|..|++.-|+..+|.
T Consensus 120 i~~agfepiiie~i~d~d~l~tdleav~~~iee~g~dcilci~st--tscfapr~pd~leaiaaica~~diphivnnayg 197 (432)
T KOG3843|consen 120 IIHAGFEPIIIENILDGDELITDLEAVEAIIEELGEDCILCIHST--TSCFAPRSPDNLEAIAAICAAHDIPHIVNNAYG 197 (432)
T ss_pred HHhcCCCceeeeccccchHHHHhHHHHHHHHHHhCCceEEEEeec--ccccCCCCCchHHHHHHHHHccCchhhhccccc
Confidence 346799988874 44444445688999998887544433333221 111112246789999999999999999999976
Q ss_pred CCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCC
Q 012238 273 GFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNP 352 (467)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 352 (467)
--... ....+....+.+.-.-++.|+-|+|-.| +|..++..-...++.. +.+......+..
T Consensus 198 lqsee----~i~~iaa~~~~grida~vqsldknf~vp---vggaiia~fk~n~iq~------------iak~ypgrasa~ 258 (432)
T KOG3843|consen 198 LQSEE----CIHKIAAAAECGRIDAFVQSLDKNFMVP---VGGAIIAAFKDNFIQE------------IAKMYPGRASAS 258 (432)
T ss_pred cchHH----HHHHHHHHhhhccHHHHHHHhhhcceee---cchhHhhHhHHHHHHH------------HHHhCCCccccC
Confidence 43211 1111212222344456789999999866 5555422223334444 555544445566
Q ss_pred chHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 012238 353 PVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK 400 (467)
Q Consensus 353 ~~~~~~~~~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~g 400 (467)
|+....+....+....+. +.+.+..+-+.+.|+.+....+ .+|
T Consensus 259 ps~dllitll~~gqn~f~----e~~~eqkemf~~l~~ki~~~ae-~~~ 301 (432)
T KOG3843|consen 259 PSLDLLITLLSLGQNAFK----ELFGEQKEMFLKLRNKIIKFAE-AIG 301 (432)
T ss_pred ccHHHHHHHHHhchhHHH----HHHHHHHHHHHHHHHHHHHHHH-Hhh
Confidence 666544444444444443 3344455555555555555444 443
No 390
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=97.28 E-value=0.013 Score=56.03 Aligned_cols=212 Identities=10% Similarity=0.084 Sum_probs=110.2
Q ss_pred ChhhHHHHHHcCC---CCcEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHH-
Q 012238 215 DFEGMIADIKAAP---GGSFILLHGCAHNPTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF- 289 (467)
Q Consensus 215 d~~~l~~~l~~~~---~~~~~i~i~~p~NPTG~-~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~- 289 (467)
.++++++.|.+.. .....+++-.-+..-|- -.+++-.++|-+++++||+.+|+||+-.+-...+ +.|.-..+
T Consensus 254 Cl~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTG---k~WaHehw~ 330 (484)
T KOG1405|consen 254 CLAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATG---KFWAHEHWN 330 (484)
T ss_pred HHHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccC---ceeeehhcC
Confidence 4556666665532 23344444444444443 3478889999999999999999999954443321 23322111
Q ss_pred HhcCCeEEEEecCccCcccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhhccCccCCCchHH--HHHHHHHhCCh
Q 012238 290 ATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRLARPMYSNPPVHG--ARIVANVVGNP 367 (467)
Q Consensus 290 ~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~L~~~ 367 (467)
++...+ +-+|||-|- .| ||. -+++++-. ...+.. ..|.+-|.-. ...+...+++.
T Consensus 331 l~~PpD---~vTFSKK~q-~g---Gff----h~~~frpn----------~pYrif--NTWmGdP~k~lll~~vv~~I~~~ 387 (484)
T KOG1405|consen 331 LDSPPD---VVTFSKKFQ-TG---GFF----HDEEFRPN----------EPYRIF--NTWMGDPSKNLLLEEVVQEIKRE 387 (484)
T ss_pred CCCCcc---ceehhhhhh-cC---ccc----cCcccCCC----------chHHHh--hhhcCChHHHHHHHHHHHHHhHH
Confidence 011123 236788885 44 555 44444332 001111 1233333211 11111122211
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc--CCCCCcccccCCcceEEecCC-CH---HHHHHHHHcccEEEeCCC-
Q 012238 368 ALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD--KSGKDWSFILRQIGMFSFTGL-NK---AQSDNMTNKWHVYMTKDG- 440 (467)
Q Consensus 368 ~~~~~~~~~l~~~~~~~~~~r~~l~~~l~~~~--g~~~~~~~~~~~~g~f~~~~l-~~---~~~~~ll~~~gI~v~~gg- 440 (467)
...++.+..-+.|...|. ++ ..|+.+.-....|.|..| +. +. +.+-..++-+||.+..||
T Consensus 388 -----------~Ll~n~~~vG~~l~~gL~-~Lq~~~p~~~~~~RGrGTF~a~-d~ps~~~Rdk~i~~~~~nGv~~GGCg~ 454 (484)
T KOG1405|consen 388 -----------DLLNNVAHVGKALLKGLL-ELQAKYPGKINNLRGRGTFIAW-DCPSGSIRDKLILIARLNGVNLGGCGD 454 (484)
T ss_pred -----------HHHHHHHHHHHHHHHHHH-HHHHhCchhhhcccccceEEEE-eCCChHHHHHHHHHHHHcCceeccccc
Confidence 233334444555555554 33 234545555566554444 33 22 223334445699998887
Q ss_pred ---eEE--eccCChhhHHHHHHHHHHHHHhc
Q 012238 441 ---RIS--LAGLSLAKCEYLADAIIDSYHNV 466 (467)
Q Consensus 441 ---Ris--~~~~~~~~i~~~~~~l~~~l~~~ 466 (467)
|+. +.- .+...+-+++++.++++.+
T Consensus 455 ~siRfRPsLvf-~~~Ha~i~l~~~~k~l~~l 484 (484)
T KOG1405|consen 455 KSIRFRPSLVF-RKHHADIFLDIFDKILAGL 484 (484)
T ss_pred ceeeeccceee-hhhhHHHHHHHHHHHhccC
Confidence 553 333 5677888999999988753
No 391
>PRK12566 glycine dehydrogenase; Provisional
Probab=97.00 E-value=0.44 Score=52.56 Aligned_cols=147 Identities=14% Similarity=0.110 Sum_probs=84.6
Q ss_pred CcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCCCCcCCCCc-----c----hHHHHHHHHHHHhCCCCcccccCceee
Q 012238 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIE-----G----LAAFNKVTAELLFGADNSVLKEQRVAT 154 (467)
Q Consensus 84 ~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~-----G----~~~lr~aia~~l~~~~~~~~~~~~i~~ 154 (467)
-..-++.|.| +. ++|..+.+.+.+ +..+...|.|.+ | +-++...++++. + .++ .|--+
T Consensus 80 ~~~fiG~G~y----~~-~~P~vi~~~i~~--~~~~yTaYTPYQpEisQG~Lqal~e~Qtmi~~Lt-G---m~v--aNASl 146 (954)
T PRK12566 80 WTSLIGMGYH----GT-VTPTVILRNVLE--NPGWYTAYTPYQPEIAQGRLEALLNFQQMTIDLT-G---LDL--ANASL 146 (954)
T ss_pred cccccccccc----CC-cCcHHHHHHHHh--CchhhhcCCCCCchhhhHHHHHHHHHHHHHHHHh-C---chh--hhhhh
Confidence 3456677777 32 336666454433 244456777743 3 456666777773 2 222 12222
Q ss_pred eecCCchhHHHHHHHHHHHhCC--CCEEEEcCCCCcchHHHHh----hCCCCeEEeeeecCCCCCCChhhHHHHHHcCCC
Q 012238 155 VQGLSGTGSLRLAAALIERYFP--GAKVLISSPTWGNHKNIFN----DARVPWSEYRYYDPKTVGLDFEGMIADIKAAPG 228 (467)
Q Consensus 155 ~~t~ggt~al~l~~~~l~~~~~--gd~Vlv~~P~y~~~~~~~~----~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~ 228 (467)
-.++|.+-+.+.+.. ...+ ..+|+|+.-.++.+...++ ..|++++. +++++.+. .
T Consensus 147 --~D~atA~aEA~~ma~-~~~~~k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~-------------~~~~~~~~---~ 207 (954)
T PRK12566 147 --LDEATAAAEAMALAK-RVAKSKSNRFFVDEHCHPQTLSVLRTRAEGFGFELVV-------------DAVDNLAA---H 207 (954)
T ss_pred --ccchhHHHHHHHHHH-HHhhcCCCEEEECCCCCHHHHHHHHHhhhcCCcEEEE-------------cchhhcCC---C
Confidence 356666555442222 2222 4689999999998887665 44544443 22333332 3
Q ss_pred CcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeE
Q 012238 229 GSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPF 266 (467)
Q Consensus 229 ~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li 266 (467)
.+..+++.+|+ -.|.+ +++++|+++++++|.++|
T Consensus 208 ~~~~v~vq~P~-~~G~i---~d~~~i~~~~h~~gal~~ 241 (954)
T PRK12566 208 AVFGALLQYPD-THGEI---RDLRPLIDQLHGQQALAC 241 (954)
T ss_pred CEEEEEEECCC-CceEE---ccHHHHHHHHHHcCCEEE
Confidence 56677776664 45776 457788889999998766
No 392
>PLN02672 methionine S-methyltransferase
Probab=96.52 E-value=0.061 Score=60.17 Aligned_cols=219 Identities=12% Similarity=0.021 Sum_probs=134.5
Q ss_pred HHHHHHHHhcCCCCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHH----HhCCCCEEEE
Q 012238 107 KKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIE----RYFPGAKVLI 182 (467)
Q Consensus 107 ~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~----~~~~gd~Vlv 182 (467)
...+...+..+...-|.|+.|...||..||.++..-++.++++++|++ .++-..|++.+.++.+ .+..+.+..+
T Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 484 (1082)
T PLN02672 407 LAYLASALKGLSYFPCEPPAGSKRFRNLIAGFMRIYHHIPLTPDNVVV--FPSRAVAIENALRLFSPRLAIVDEHLTRWL 484 (1082)
T ss_pred HHHHHHHHccCCCCCCCCCccchHHHHHHHHHHHHhcCCcCCccceEE--eccHHHHHHHHHHhhChHHHhhhhhhhccC
Confidence 344455555555577889999999999999999888899999999999 8999999987643322 1222222222
Q ss_pred cCCCCcchHHHHhhCC--------CCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHH
Q 012238 183 SSPTWGNHKNIFNDAR--------VPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKI 254 (467)
Q Consensus 183 ~~P~y~~~~~~~~~~G--------~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l 254 (467)
| +. |...+...| ..+..+.- +. .-+.+.+.+++ -++.+++..-.+ +-..+...++.|
T Consensus 485 ~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~--~~----~~~~~~~~~~~--~~~~~~~~~~~~---~~~~~~~~~~~~ 549 (1082)
T PLN02672 485 P-KK---WLTSLAIENATSDSKSDDVITVIEA--PR----QSDLVIELIKK--LKPQVVVTGMAD---FEMRTSTAFEHL 549 (1082)
T ss_pred C-HH---HHhHhhhhcccccCccCCeEEEEeC--CC----cchHHHHHHHh--CCCeEEEEeccc---hhhhhHHHHHHH
Confidence 1 12 222222222 12222211 11 12356666665 344566654444 455667789999
Q ss_pred HHHHHhcCCeeEEecc-CCCCCCCCCCCChhHHHHHHh--cCCeEEEEecCccCcccCCCccceEEEecCCHHHHhhhhh
Q 012238 255 ADVIQEKNHIPFFDVA-YQGFASGSLDNDASSVRLFAT--RGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARCCE 331 (467)
Q Consensus 255 ~~~~~~~~~~li~Dea-y~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~ 331 (467)
.+.+++-|..++.|.. |..+... ......+..+.. ...+..++.++-|+--.+.+-+.+++ .-++.+...
T Consensus 550 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~--- 622 (1082)
T PLN02672 550 LNVTAEIGARLFLDISDHLELSSL--PGSNGVLKYLAGHPLPSHAAIICGLVKNQVYSDLEVAFVI--SENEAVLKA--- 622 (1082)
T ss_pred HHHHHhhCcEEEEehhhheeeccC--CCcccHHHHhcCCCCCcchhHhhhhhhccccccceEEEEe--cCcHHHHHH---
Confidence 9999999999999987 2233322 122222333322 22477888999999888999999996 455555554
Q ss_pred hhHHHHHHHHHhhccCccCCCchHHHH
Q 012238 332 VAVIQVKSQLKRLARPMYSNPPVHGAR 358 (467)
Q Consensus 332 ~~~~~~~~~l~~~~~~~~~~~~~~~~~ 358 (467)
+.+.....+++...++|.
T Consensus 623 ---------~~~~~~~~~~~~~~~~~~ 640 (1082)
T PLN02672 623 ---------LSKTGEVLEGRTAIISQF 640 (1082)
T ss_pred ---------HHHHHHhhccchHHHHHH
Confidence 544444445555555544
No 393
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=94.91 E-value=1.4 Score=41.29 Aligned_cols=322 Identities=18% Similarity=0.173 Sum_probs=152.2
Q ss_pred CCcEEecCcccCCCCCCCCchHHHHHHHHHHHhcCC--------CCcCCCC-cchHHHHHHHHHHHhCCCCcccccCcee
Q 012238 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE--------NKEYLPI-EGLAAFNKVTAELLFGADNSVLKEQRVA 153 (467)
Q Consensus 83 ~~~i~l~~G~~~d~~~~p~~~~~v~~a~~~~~~~~~--------~~~Y~~~-~G~~~lr~aia~~l~~~~~~~~~~~~i~ 153 (467)
.+++||+.|-- ..| .+.++++-.+.++-+. +++-... .-+.+....+.++|.-.+ .-.|+
T Consensus 6 ~~vvnFaaGPA----klp--~~VL~e~qkdl~n~~g~GisV~EmSHRsk~f~kii~~tes~lreLlniPd-----n~~vl 74 (370)
T KOG2790|consen 6 ERVVNFAAGPA----KLP--ESVLLEAQKDLLNFNGSGISVMEMSHRSKDFAKIINDTESLLRELLNIPD-----NYKVL 74 (370)
T ss_pred cceeecCCCcc----cCC--HHHHHHHHHHhhccCCCcceEEEecccchhHHHHHHHHHHHHHHHHcCCC-----ceeEE
Confidence 47899998843 222 4555665555553210 0110011 113444455666654422 22566
Q ss_pred eeecCCchhHHHHHHHHHHHh--CCC---CEEEEcCCCCcchHHHHhhCCCC-eEEeeeecCCC--CCCChhhHHHHHHc
Q 012238 154 TVQGLSGTGSLRLAAALIERY--FPG---AKVLISSPTWGNHKNIFNDARVP-WSEYRYYDPKT--VGLDFEGMIADIKA 225 (467)
Q Consensus 154 ~~~t~ggt~al~l~~~~l~~~--~~g---d~Vlv~~P~y~~~~~~~~~~G~~-~~~v~~~~~~~--~~~d~~~l~~~l~~ 225 (467)
++|.. ||+-+..+ .+.++ ..| |-|+.-+-+--.+.++- .+|.. .+..+.. +-. .-+|.+.++..
T Consensus 75 f~QGG-Gt~qFaAv--~lNL~glK~g~~AdYiVTGsWS~KA~~EAk-k~~~~~~V~~~~k-~y~ygkvPd~~~w~~~--- 146 (370)
T KOG2790|consen 75 FLQGG-GTGQFAAV--PLNLIGLKHGRCADYVVTGSWSAKAAEEAK-KYGTPNIVIPKLK-SYTYGKVPDPSTWELN--- 146 (370)
T ss_pred EEeCC-Cccccccc--chhhhccccCCccceEEeccccHHHHHHHH-hhCCceEEecccc-ccccCcCCChhhcccC---
Confidence 66554 44444443 23333 334 45554333333444443 34433 3333332 222 23565555332
Q ss_pred CCCCcEEEEeCCCCCCC--CCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCc
Q 012238 226 APGGSFILLHGCAHNPT--GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYS 303 (467)
Q Consensus 226 ~~~~~~~i~i~~p~NPT--G~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~S 303 (467)
++...+..| .|.| |+-++ .+- +-.-+|.++|.|.. +.|..... |.. ...++..+.-
T Consensus 147 --~da~yvyyC--aNETVHGVEf~-----~~P-~~~~~~~vlVaDmS-SnflSrpv--Dvs---------k~gvi~aGAQ 204 (370)
T KOG2790|consen 147 --PDASYVYYC--ANETVHGVEFD-----FIP-VNDPKGAVLVADMS-SNFLSRPV--DVS---------KFGVIFAGAQ 204 (370)
T ss_pred --CCccEEEEe--cCceeeceecC-----CCC-CCCCCCceEEEecc-cchhcCCc--cch---------hcceEEeccc
Confidence 233344444 5655 55332 221 11236788888887 55654322 211 2346677889
Q ss_pred cCcccCCCccceEEEecCCHHHHhhhhhhhHHHHHHHHHhh--ccCccCCCchHHHH----HHHHHhCChhhHHHHHHHH
Q 012238 304 KNLGLYAERIGAMNVVCSSSDLAARCCEVAVIQVKSQLKRL--ARPMYSNPPVHGAR----IVANVVGNPALFDEWKAEM 377 (467)
Q Consensus 304 K~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~----~~~~~L~~~~~~~~~~~~l 377 (467)
|++|++|+.+-. -.++++...... .+-+.+ .+.. ....+..+|..+.. ....+++++. +
T Consensus 205 KN~G~aG~Tvvi-----vr~dllg~~~~~-tP~v~d-yk~~~~NnSlyNTpP~f~iy~~~Lv~~~il~~GG--------l 269 (370)
T KOG2790|consen 205 KNVGPAGVTVVI-----VRKDLLGNALDI-TPSVLD-YKIMDKNNSLYNTPPCFGIYVMGLVFEWILEKGG--------L 269 (370)
T ss_pred cccCccccEEEE-----EehhhhcccccC-Cccccc-eeeeccccccccCCCeeeeeehhhHHHHHHhccc--------H
Confidence 999998863322 234444430000 000000 1111 11123334433322 2333444443 3
Q ss_pred HHHHHHHHHHHHHHHHHhhhcc-CCCCCcccc-cC--CcceEEec-----CCCHHHHHHHHHcccEEEeCC-----C-eE
Q 012238 378 EMMAGRIKNVRQKLFDSLSAKD-KSGKDWSFI-LR--QIGMFSFT-----GLNKAQSDNMTNKWHVYMTKD-----G-RI 442 (467)
Q Consensus 378 ~~~~~~~~~~r~~l~~~l~~~~-g~~~~~~~~-~~--~~g~f~~~-----~l~~~~~~~ll~~~gI~v~~g-----g-Ri 442 (467)
..+.+.-.++.+.+++.+. .. |+ +.+. .| ..-|-+.. .+..+|+.+..++ +..-..| | |-
T Consensus 270 ~a~e~~n~~KskllYd~iD-~s~gf---y~cpVe~~~RS~MNV~Fri~~d~Le~eFLkeA~~~-~mv~LKGhRSVGGiRA 344 (370)
T KOG2790|consen 270 AAMEKLNQEKSKLLYDAID-NSNGF---YRCPVEPSVRSRMNVPFRIEKDELEAEFLKEAAKE-HMVQLKGHRSVGGIRA 344 (370)
T ss_pred HHHHHHHHHHHHHHHHHHH-hcCCe---EEcccchhhhhhcccceeecchHHHHHHHHHHHHh-hhhccccccccccchh
Confidence 4555566677888999987 43 32 1110 11 11111111 1345667666665 5555555 3 88
Q ss_pred Eecc-CChhhHHHHHHHHHHHHHh
Q 012238 443 SLAG-LSLAKCEYLADAIIDSYHN 465 (467)
Q Consensus 443 s~~~-~~~~~i~~~~~~l~~~l~~ 465 (467)
|+.. ++-++.+.++.-+++..+.
T Consensus 345 SlYNAisv~~~q~L~~~m~~F~k~ 368 (370)
T KOG2790|consen 345 SLYNAISVEEVQKLAAFMKEFQKK 368 (370)
T ss_pred hhhccccHHHHHHHHHHHHHHHHh
Confidence 8654 4778888888888877654
No 394
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=94.89 E-value=0.33 Score=50.26 Aligned_cols=142 Identities=16% Similarity=0.135 Sum_probs=94.1
Q ss_pred CcCCC---CcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHh--CCC----CEEEEcCCCCcch
Q 012238 120 KEYLP---IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY--FPG----AKVLISSPTWGNH 190 (467)
Q Consensus 120 ~~Y~~---~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~--~~g----d~Vlv~~P~y~~~ 190 (467)
+-|.| .+|+.++-+.+-++|-...|. +++.+ |.++|.++-+.-.+.+... .+| ...+||.-.+...
T Consensus 569 HPF~P~eQaqGY~~lf~~Le~~Lc~iTG~----D~~s~-QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTN 643 (1001)
T KOG2040|consen 569 HPFAPVEQAQGYQQLFTELEKDLCEITGF----DSFSL-QPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTN 643 (1001)
T ss_pred CCCCchHHHhhHHHHHHHHHHHhheeecc----cceee-cCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCC
Confidence 45655 356666666666665443332 34444 3455544444432223222 133 3577887778777
Q ss_pred HHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEecc
Q 012238 191 KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVA 270 (467)
Q Consensus 191 ~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Dea 270 (467)
...+..+|.+++++.+ ..++.+|..+|++..+++.+.-..+.++.|. -.-.=.+.+.+++++..+||--+..|.+
T Consensus 644 PASA~MagmkvvpV~~--~~~G~id~~dLk~kaekh~~~Laa~MvTYPS---T~GvfE~~i~d~cd~iHehGGQVYlDGA 718 (1001)
T KOG2040|consen 644 PASAAMAGMKVVPVGC--DANGNIDMVDLKAKAEKHKDNLAALMVTYPS---THGVFEEGIDDICDIIHEHGGQVYLDGA 718 (1001)
T ss_pred hhhHHhcCCEEEEeec--cCCCCccHHHHHHHHHHhhhhhheeEEeccc---ccccccccHHHHHHHHHhcCCEEEecCC
Confidence 7788899999999988 4567899999999988765666666666654 2223355689999999999999999988
Q ss_pred C
Q 012238 271 Y 271 (467)
Q Consensus 271 y 271 (467)
-
T Consensus 719 N 719 (1001)
T KOG2040|consen 719 N 719 (1001)
T ss_pred C
Confidence 3
No 395
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=88.61 E-value=19 Score=32.78 Aligned_cols=93 Identities=24% Similarity=0.355 Sum_probs=59.7
Q ss_pred cCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCC-cchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCC
Q 012238 149 EQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTW-GNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP 227 (467)
Q Consensus 149 ~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y-~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~ 227 (467)
...+++ ..||..|..-+ -..+..|.+|.+.+|.. +......+..+..++. ..++.+.+
T Consensus 12 ~k~Vlv--vGgG~va~rKa---~~ll~~ga~v~Vvs~~~~~el~~~~~~~~i~~~~--------~~~~~~~~-------- 70 (210)
T COG1648 12 GKKVLV--VGGGSVALRKA---RLLLKAGADVTVVSPEFEPELKALIEEGKIKWIE--------REFDAEDL-------- 70 (210)
T ss_pred CCEEEE--ECCCHHHHHHH---HHHHhcCCEEEEEcCCccHHHHHHHHhcCcchhh--------cccChhhh--------
Confidence 456777 79999998876 33466799999999999 4444455544422222 12344443
Q ss_pred CCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeE-Eecc
Q 012238 228 GGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPF-FDVA 270 (467)
Q Consensus 228 ~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li-~Dea 270 (467)
....+++.++.+ .+.=+++.+.|+++++++- +|+.
T Consensus 71 ~~~~lviaAt~d--------~~ln~~i~~~a~~~~i~vNv~D~p 106 (210)
T COG1648 71 DDAFLVIAATDD--------EELNERIAKAARERRILVNVVDDP 106 (210)
T ss_pred cCceEEEEeCCC--------HHHHHHHHHHHHHhCCceeccCCc
Confidence 224566666554 5677899999999986653 4544
No 396
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=79.65 E-value=30 Score=31.33 Aligned_cols=94 Identities=14% Similarity=0.144 Sum_probs=54.3
Q ss_pred cCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCC
Q 012238 149 EQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPG 228 (467)
Q Consensus 149 ~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~ 228 (467)
..+|++ ..||.-|...+ ..++..|..|.|.+|....-...+...| ++..+.- . .+.+. +.
T Consensus 9 gk~vlV--vGgG~va~rk~---~~Ll~~ga~VtVvsp~~~~~l~~l~~~~-~i~~~~~----~--~~~~d----l~---- 68 (205)
T TIGR01470 9 GRAVLV--VGGGDVALRKA---RLLLKAGAQLRVIAEELESELTLLAEQG-GITWLAR----C--FDADI----LE---- 68 (205)
T ss_pred CCeEEE--ECcCHHHHHHH---HHHHHCCCEEEEEcCCCCHHHHHHHHcC-CEEEEeC----C--CCHHH----hC----
Confidence 457777 78888888876 3345567788888887764433333333 4443321 1 22222 22
Q ss_pred CcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeE-Eecc
Q 012238 229 GSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPF-FDVA 270 (467)
Q Consensus 229 ~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li-~Dea 270 (467)
...+++.+ +++ .+.-..+++.|++.++++- .|+.
T Consensus 69 ~~~lVi~a-t~d-------~~ln~~i~~~a~~~~ilvn~~d~~ 103 (205)
T TIGR01470 69 GAFLVIAA-TDD-------EELNRRVAHAARARGVPVNVVDDP 103 (205)
T ss_pred CcEEEEEC-CCC-------HHHHHHHHHHHHHcCCEEEECCCc
Confidence 34455543 443 3334678899999998773 4554
No 397
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=78.31 E-value=66 Score=30.90 Aligned_cols=156 Identities=19% Similarity=0.091 Sum_probs=101.9
Q ss_pred hHHHHHHHHHHHhc-------CCCCcCCC-CcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHh
Q 012238 103 LDVVKKAENLMLER-------GENKEYLP-IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY 174 (467)
Q Consensus 103 ~~~v~~a~~~~~~~-------~~~~~Y~~-~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~ 174 (467)
|..+++.+.+.++. ++..+-.| ..+.......++...... .++|.+ .++-|--++.. +++.+
T Consensus 80 PK~t~~~~~~eLDkWak~av~gH~~GkvPW~~~De~il~l~~~iVGA~------e~Evav--mNsLTvNlh~L--l~sFy 149 (465)
T KOG3846|consen 80 PKSTRNSINAELDKWAKCAVEGHFKGKVPWVSIDEPILPLLAPIVGAQ------ENEVAV--MNSLTVNLHSL--LISFY 149 (465)
T ss_pred chhhHhHHHHHHHHHHhhhhhcccccccceeecchhhhhhhhhhccCC------chhhhh--HhhhhhHHHHH--HHHhc
Confidence 56666666655532 22122222 233444555666664433 678887 77778878876 55555
Q ss_pred CCC---CEEEEcCCCCc----chHHHHhhCCCCeEEe--eeec-CCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCC
Q 012238 175 FPG---AKVLISSPTWG----NHKNIFNDARVPWSEY--RYYD-PKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGI 244 (467)
Q Consensus 175 ~~g---d~Vlv~~P~y~----~~~~~~~~~G~~~~~v--~~~~-~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~ 244 (467)
.|- -+|+.+.-.|+ .+.+.++..|..+... -..+ +....+..+++.+.|++..+...+++.+..+.=||.
T Consensus 150 KPTekR~KILlE~kaFPSDhYAiesQ~~lhG~~~e~sm~~iePREGEetlRteDILd~IEkngDeiA~v~fSGvqyYTGQ 229 (465)
T KOG3846|consen 150 KPTEKRFKILLEKKAFPSDHYAIESQCKLHGISPENSMIQIEPREGEETLRTEDILDTIEKNGDEIALVCFSGVQYYTGQ 229 (465)
T ss_pred CCcchhhhhhhccCCCCchHHHHHhhhhhcCCChHHheEEecccccccchhHHHHHHHHHhcCCeEEEEEeecceeeccc
Confidence 554 37888887765 3456778888875432 1211 223457889999999887677788888899999999
Q ss_pred CCCHHHHHHHHHHHHhcCCeeEEeccC
Q 012238 245 DPTPEQWEKIADVIQEKNHIPFFDVAY 271 (467)
Q Consensus 245 ~~~~~~l~~l~~~~~~~~~~li~Deay 271 (467)
.++.. +|-..-+.+|+++=.|-++
T Consensus 230 ~Fdi~---aIT~Agq~kgc~VGfDLAH 253 (465)
T KOG3846|consen 230 YFDIG---AITFAGQFKGCLVGFDLAH 253 (465)
T ss_pred ccchh---hhhhcccCCCcEechhhhh
Confidence 98865 5555566789999999884
No 398
>cd06568 GH20_SpHex_like A subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the N-acetylhexosaminidase from Streptomyces plicatus (SpHex). SpHex catalyzes the hydrolysis of N-acetyl-beta-hexosaminides. An Asp residue within the active site plays a critical role in substrate-assisted catalysis by orienting the 2-acetamido group and stabilizing the transition state. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself. Proteins belonging to this subgroup lack the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases.
Probab=72.45 E-value=8.8 Score=37.62 Aligned_cols=69 Identities=10% Similarity=0.043 Sum_probs=47.5
Q ss_pred HHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeE
Q 012238 191 KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPF 266 (467)
Q Consensus 191 ~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li 266 (467)
...+...+.++..+.+.|+.+|.+..+...+.-.. ... .....+.|..|+.+|+++|++.|+++||-||
T Consensus 24 id~ma~~KlN~lhlHLtD~~~~rle~~~~P~lt~~---ga~----~~~~~~~~~~YT~~di~elv~yA~~rgI~vI 92 (329)
T cd06568 24 IDLLALYKLNVLHLHLTDDQGWRIEIKSWPKLTEI---GGS----TEVGGGPGGYYTQEDYKDIVAYAAERHITVV 92 (329)
T ss_pred HHHHHHhCCcEEEEEeecCCcceeeecCccccccc---ccc----cccCCCCCCcCCHHHHHHHHHHHHHcCCEEE
Confidence 34555677888888887666777766655443221 110 1223456778999999999999999999888
No 399
>cd02742 GH20_hexosaminidase Beta-N-acetylhexosaminidases of glycosyl hydrolase family 20 (GH20) catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. These enzymes are broadly distributed in microorganisms, plants and animals, and play roles in various key physiological and pathological processes. These processes include cell structural integrity, energy storage, cellular signaling, fertilization, pathogen defense, viral penetration, the development of carcinomas, inflammatory events and lysosomal storage disorders. The GH20 enzymes include the eukaryotic beta-N-acetylhexosaminidases A and B, the bacterial chitobiases, dispersin B, and lacto-N-biosidase. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by the solvent or the enzyme, but by the substrate itself.
Probab=70.03 E-value=12 Score=36.28 Aligned_cols=68 Identities=9% Similarity=0.015 Sum_probs=47.7
Q ss_pred HHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeE
Q 012238 191 KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPF 266 (467)
Q Consensus 191 ~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li 266 (467)
...+...+.++..+.+.|+.+|.+......+.-+. ... .++ .+.|-.++.+|+++|++.|+++|+-||
T Consensus 22 id~ma~~K~N~lhlHl~D~~~~~le~~~~p~l~~~---g~~----~~~-~~~~~~yT~~di~elv~yA~~rgI~vi 89 (303)
T cd02742 22 IDVLARYKINTFHWHLTDDQAWRIESKKFPELAEK---GGQ----INP-RSPGGFYTYAQLKDIIEYAAARGIEVI 89 (303)
T ss_pred HHHHHHhCCcEEEEeeecCCCceEeeCccchhhhh---ccc----ccC-CCCCCeECHHHHHHHHHHHHHcCCEEE
Confidence 34555778888888887766777776666554432 111 111 244568999999999999999999887
No 400
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=69.51 E-value=51 Score=30.10 Aligned_cols=92 Identities=16% Similarity=0.177 Sum_probs=52.4
Q ss_pred CchhHHHHHHHHHHHhCCCCEE-EEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCC
Q 012238 159 SGTGSLRLAAALIERYFPGAKV-LISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGC 237 (467)
Q Consensus 159 ggt~al~l~~~~l~~~~~gd~V-lv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~ 237 (467)
.|..+-.++..++. ++-+| .+..+.-......++..|++++..++ -|.+.|.++++. -..++++..
T Consensus 7 tG~~G~~v~~~L~~---~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~-------~~~~~l~~al~g---~d~v~~~~~ 73 (233)
T PF05368_consen 7 TGNQGRSVVRALLS---AGFSVRALVRDPSSDRAQQLQALGAEVVEADY-------DDPESLVAALKG---VDAVFSVTP 73 (233)
T ss_dssp TSHHHHHHHHHHHH---TTGCEEEEESSSHHHHHHHHHHTTTEEEES-T-------T-HHHHHHHHTT---CSEEEEESS
T ss_pred ccHHHHHHHHHHHh---CCCCcEEEEeccchhhhhhhhcccceEeeccc-------CCHHHHHHHHcC---CceEEeecC
Confidence 34445555433333 44433 33344422334456778998876655 378999999983 334444444
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCCeeEE
Q 012238 238 AHNPTGIDPTPEQWEKIADVIQEKNHIPFF 267 (467)
Q Consensus 238 p~NPTG~~~~~~~l~~l~~~~~~~~~~li~ 267 (467)
+.+ ....+.-..+++.|++.|+-.++
T Consensus 74 ~~~----~~~~~~~~~li~Aa~~agVk~~v 99 (233)
T PF05368_consen 74 PSH----PSELEQQKNLIDAAKAAGVKHFV 99 (233)
T ss_dssp CSC----CCHHHHHHHHHHHHHHHT-SEEE
T ss_pred cch----hhhhhhhhhHHHhhhccccceEE
Confidence 333 23366778899999998875554
No 401
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]
Probab=68.11 E-value=69 Score=29.25 Aligned_cols=123 Identities=12% Similarity=0.108 Sum_probs=74.5
Q ss_pred cCCchhHHHHHHHHHHHhCCCCEE-----EEcC-C-CCc----c---hHHHHhhCCCCeEEeeeecCCCCCCChhhHHHH
Q 012238 157 GLSGTGSLRLAAALIERYFPGAKV-----LISS-P-TWG----N---HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIAD 222 (467)
Q Consensus 157 t~ggt~al~l~~~~l~~~~~gd~V-----lv~~-P-~y~----~---~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~ 222 (467)
-+||..+...+ ...+..|..| +.|. + +|. + ..-.++..|.+++..+.. ....-..++|.+.
T Consensus 7 ~SGGKDS~~Al---~~a~~~G~eV~~Ll~~~p~~~dS~m~H~~n~~~~~~~Ae~~gi~l~~~~~~--g~~e~eve~L~~~ 81 (223)
T COG2102 7 YSGGKDSFYAL---YLALEEGHEVVYLLTVKPENGDSYMFHTPNLELAELQAEAMGIPLVTFDTS--GEEEREVEELKEA 81 (223)
T ss_pred EecCcHHHHHH---HHHHHcCCeeEEEEEEecCCCCeeeeeccchHHHHHHHHhcCCceEEEecC--ccchhhHHHHHHH
Confidence 68999997775 3344455433 2222 2 121 1 123556788888887763 2233467888888
Q ss_pred HHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEec
Q 012238 223 IKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQS 301 (467)
Q Consensus 223 l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S 301 (467)
++.- +...++ +|.+++..+..++-.+|++.|+.++. .+ ++. + ...-+..++..+-+.+++..
T Consensus 82 l~~l--~~d~iv-------~GaI~s~yqk~rve~lc~~lGl~~~~-----PL-Wg~-d-~~ell~e~~~~Gf~~~Iv~V 143 (223)
T COG2102 82 LRRL--KVDGIV-------AGAIASEYQKERVERLCEELGLKVYA-----PL-WGR-D-PEELLEEMVEAGFEAIIVAV 143 (223)
T ss_pred HHhC--cccEEE-------EchhhhHHHHHHHHHHHHHhCCEEee-----cc-cCC-C-HHHHHHHHHHcCCeEEEEEE
Confidence 8753 333554 49999999999999999999987653 33 221 1 12234445556666665543
No 402
>cd06562 GH20_HexA_HexB-like Beta-N-acetylhexosaminidases catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. The hexA and hexB genes encode the alpha- and beta-subunits of the two major beta-N-acetylhexosaminidase isoenzymes, N-acetyl-beta-D-hexosaminidase A (HexA) and beta-N-acetylhexosaminidase B (HexB). Both the alpha and the beta catalytic subunits have a TIM-barrel fold and belong to the glycosyl hydrolase family 20 (GH20). The HexA enzyme is a heterodimer containing one alpha and one beta subunit while the HexB enzyme is a homodimer containing two beta-subunits. Hexosaminidase mutations cause an inability to properly hydrolyze certain sphingolipids which accumulate in lysosomes within the brain, resulting in the lipid storage disorders Tay-Sachs and Sandhoff. Mutations in the alpha subunit cause in a deficiency in the HexA enzyme and result in
Probab=66.75 E-value=12 Score=37.05 Aligned_cols=64 Identities=13% Similarity=0.085 Sum_probs=46.8
Q ss_pred HHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeE
Q 012238 191 KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPF 266 (467)
Q Consensus 191 ~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li 266 (467)
...+..++.++..+.+.|+.+|.+....+.+.-.. . ....|..|+.+|+++|++.|+++||-||
T Consensus 24 Id~ma~~KlN~lh~HltDd~~~rle~~~~P~Lt~~---g---------a~~~~~~YT~~di~eiv~yA~~rgI~vI 87 (348)
T cd06562 24 IDAMAYNKLNVLHWHITDSQSFPLESPSYPELSKK---G---------AYSPSEVYTPEDVKEIVEYARLRGIRVI 87 (348)
T ss_pred HHHHHHhCCcEEEEeEEcCCCceEeeCCCchhhhc---c---------CcCCCceECHHHHHHHHHHHHHcCCEEE
Confidence 34555677788888887777777777666554331 1 1134678999999999999999999888
No 403
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=64.47 E-value=64 Score=25.05 Aligned_cols=70 Identities=7% Similarity=-0.051 Sum_probs=44.7
Q ss_pred CCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCee
Q 012238 186 TWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIP 265 (467)
Q Consensus 186 ~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~l 265 (467)
....|...++..|++.... - .+.+..-....++..+.+ .-.+|++++. .+-+-...+-+.|+++|+.+
T Consensus 11 ~~~~~~~~~~~~G~~~~~h-g-~~~~~~~~~~~l~~~i~~---aD~VIv~t~~-------vsH~~~~~vk~~akk~~ip~ 78 (97)
T PF10087_consen 11 RERRYKRILEKYGGKLIHH-G-RDGGDEKKASRLPSKIKK---ADLVIVFTDY-------VSHNAMWKVKKAAKKYGIPI 78 (97)
T ss_pred cHHHHHHHHHHcCCEEEEE-e-cCCCCccchhHHHHhcCC---CCEEEEEeCC-------cChHHHHHHHHHHHHcCCcE
Confidence 3356888899999998887 2 222232333347777763 2234443332 34566788889999999988
Q ss_pred EE
Q 012238 266 FF 267 (467)
Q Consensus 266 i~ 267 (467)
+.
T Consensus 79 ~~ 80 (97)
T PF10087_consen 79 IY 80 (97)
T ss_pred EE
Confidence 75
No 404
>cd06570 GH20_chitobiase-like_1 A functionally uncharacterized subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the chitobiase of Serratia marcescens, a beta-N-1,4-acetylhexosaminidase that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This subgroup lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=64.02 E-value=14 Score=35.86 Aligned_cols=62 Identities=8% Similarity=0.083 Sum_probs=42.6
Q ss_pred HHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeE
Q 012238 191 KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPF 266 (467)
Q Consensus 191 ~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li 266 (467)
...+..++.++..+.+.|+.+|.+....+.+.-. .. ..|..|+.+++++|++.|+++|+-||
T Consensus 24 Id~ma~~KlN~lh~HltDd~~~rle~~~~P~lt~---~g-----------~~~~~yT~~di~elv~yA~~rgI~vI 85 (311)
T cd06570 24 LDAMASVKLNVFHWHLTDDQGFRIESKKYPKLQQ---KA-----------SDGLYYTQEQIREVVAYARDRGIRVV 85 (311)
T ss_pred HHHHHHhCCeEEEEEEecCCCceeecCCCccccc---cC-----------CCCCccCHHHHHHHHHHHHHcCCEEE
Confidence 3445567777777777666666666554433221 01 13567999999999999999999877
No 405
>PF02662 FlpD: Methyl-viologen-reducing hydrogenase, delta subunit; InterPro: IPR003813 Methyl-viologen-reducing hydrogenase (MVH) is one of the enzymes involved in methanogenesis and coded in the mth-flp-mvh-mrt cluster of methane genes in Methanothermobacter thermautotrophicus (Methanobacterium thermoformicicum) []. No specific functions have been assigned to the delta subunit.; GO: 0015948 methanogenesis, 0055114 oxidation-reduction process
Probab=61.93 E-value=21 Score=29.48 Aligned_cols=59 Identities=12% Similarity=0.134 Sum_probs=39.1
Q ss_pred CCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCC---CCCCCCCCCCHHHHHHHHHHHHhcC
Q 012238 199 VPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGC---AHNPTGIDPTPEQWEKIADVIQEKN 262 (467)
Q Consensus 199 ~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~---p~NPTG~~~~~~~l~~l~~~~~~~~ 262 (467)
+.++.+|. .+.+|++.+.+++.+- ..-++++=|. +|+..|.....+.++.+-++..+.|
T Consensus 29 vriIrvpC----~Grv~~~~il~Af~~G-ADGV~V~gC~~g~Ch~~~Gn~~a~~Rv~~~k~~L~~~G 90 (124)
T PF02662_consen 29 VRIIRVPC----SGRVDPEFILRAFEKG-ADGVLVAGCHPGDCHYREGNYRAEKRVERLKKLLEELG 90 (124)
T ss_pred eEEEEccC----CCccCHHHHHHHHHcC-CCEEEEeCCCCCCCCcchhhHHHHHHHHHHHHHHHHcC
Confidence 45566666 5679999999999852 2222222233 4557888888887777777777655
No 406
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=60.83 E-value=1.4e+02 Score=28.94 Aligned_cols=55 Identities=9% Similarity=0.226 Sum_probs=35.9
Q ss_pred CCChhhHHHHHHcC---CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEecc
Q 012238 213 GLDFEGMIADIKAA---PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVA 270 (467)
Q Consensus 213 ~~d~~~l~~~l~~~---~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Dea 270 (467)
.++.+++++.++.. -....++++ +.+=|.| ++.+...+|++.|++.|..++.|..
T Consensus 110 ~is~~~~~~~l~~~~~~l~~~d~Vvl-sGSlP~g--~~~d~y~~li~~~~~~g~~vilD~S 167 (310)
T COG1105 110 EISEAELEQFLEQLKALLESDDIVVL-SGSLPPG--VPPDAYAELIRILRQQGAKVILDTS 167 (310)
T ss_pred CCCHHHHHHHHHHHHHhcccCCEEEE-eCCCCCC--CCHHHHHHHHHHHHhcCCeEEEECC
Confidence 45555555544331 122223333 4555666 4688899999999999999999966
No 407
>PF14258 DUF4350: Domain of unknown function (DUF4350)
Probab=60.72 E-value=28 Score=25.12 Aligned_cols=23 Identities=17% Similarity=0.306 Sum_probs=18.5
Q ss_pred CC-HHHHHHHHHHHHhcCCeeEEe
Q 012238 246 PT-PEQWEKIADVIQEKNHIPFFD 268 (467)
Q Consensus 246 ~~-~~~l~~l~~~~~~~~~~li~D 268 (467)
++ .+++++|.++.++=|.++|+|
T Consensus 47 ~~~~~~~~~l~~~v~~G~~lvl~a 70 (70)
T PF14258_consen 47 LSEPEEAEALLEWVEAGNTLVLAA 70 (70)
T ss_pred CCchHHHHHHHHHHHcCCEEEEeC
Confidence 44 589999999999878777765
No 408
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=58.96 E-value=1.5e+02 Score=27.28 Aligned_cols=93 Identities=11% Similarity=-0.024 Sum_probs=56.5
Q ss_pred CceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCC
Q 012238 150 QRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGG 229 (467)
Q Consensus 150 ~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 229 (467)
.+|++ ..||.-|..-+ ..++.-|.+|.|.+|.+..-...+...| .+..+.- . ++.+.+ ..
T Consensus 26 ~~VLV--VGGG~VA~RK~---~~Ll~~gA~VtVVap~i~~el~~l~~~~-~i~~~~r----~--~~~~dl--------~g 85 (223)
T PRK05562 26 IKVLI--IGGGKAAFIKG---KTFLKKGCYVYILSKKFSKEFLDLKKYG-NLKLIKG----N--YDKEFI--------KD 85 (223)
T ss_pred CEEEE--ECCCHHHHHHH---HHHHhCCCEEEEEcCCCCHHHHHHHhCC-CEEEEeC----C--CChHHh--------CC
Confidence 47888 89999998876 3345568899999999864433332222 2333221 1 233333 23
Q ss_pred cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeE-Eecc
Q 012238 230 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPF-FDVA 270 (467)
Q Consensus 230 ~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li-~Dea 270 (467)
..+++.++. +.+-=++|.+.|+++++++. +|+.
T Consensus 86 ~~LViaATd--------D~~vN~~I~~~a~~~~~lvn~vd~p 119 (223)
T PRK05562 86 KHLIVIATD--------DEKLNNKIRKHCDRLYKLYIDCSDY 119 (223)
T ss_pred CcEEEECCC--------CHHHHHHHHHHHHHcCCeEEEcCCc
Confidence 456665543 26667889999999876544 5553
No 409
>TIGR03815 CpaE_hom_Actino helicase/secretion neighborhood CpaE-like protein. Members of this protein family belong to the MinD/ParA family of P-loop NTPases, and in particular show homology to the CpaE family of pilus assembly proteins (see PubMed:12370432). Nearly all members are found, not only in a gene context consistent with pilus biogenesis or a pilus-like secretion apparatus, but also near a DEAD/DEAH-box helicase, suggesting an involvement in DNA transfer activity. The model describes a clade restricted to the Actinobacteria.
Probab=58.01 E-value=1.4e+02 Score=29.06 Aligned_cols=133 Identities=16% Similarity=0.102 Sum_probs=69.8
Q ss_pred chHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHh-CCCCEEEEcC--CCCcchHHHHhhCCCCeEE
Q 012238 127 GLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY-FPGAKVLISS--PTWGNHKNIFNDARVPWSE 203 (467)
Q Consensus 127 G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~-~~gd~Vlv~~--P~y~~~~~~~~~~G~~~~~ 203 (467)
...++.+++++..... .-...-|.++..-||.|.-.++..+-..+ ..|.+|++.+ |...... ..+|.+...
T Consensus 74 ~~~~l~~~l~~~~~~~---~~~~~vIav~~~KGGvGkTT~a~nLA~~la~~g~~VlLvD~D~~~~~~~---~~lg~~~~~ 147 (322)
T TIGR03815 74 AEGWLVELLADLDQSP---PARGVVVAVIGGRGGAGASTLAAALALAAARHGLRTLLVDADPWGGGLD---LLLGAEDVP 147 (322)
T ss_pred CHHHHHHHHHhhccCC---CCCceEEEEEcCCCCCcHHHHHHHHHHHHHhcCCCEEEEecCCCCCCee---eeecCCCCC
Confidence 3567777777652111 11122445544567766555543332222 3677777765 5544322 122332110
Q ss_pred -e---eeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEecc
Q 012238 204 -Y---RYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVA 270 (467)
Q Consensus 204 -v---~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Dea 270 (467)
+ +.. .....+|.+.+.+.+.. ...+-+++.+..+ +..++.+.++++++..+++-=++|+|..
T Consensus 148 ~~~~~~~~-~~~~~~~~~~l~~~~~~---~~~l~vl~~~~~~-~~~~~~~~l~~~l~~l~~~~D~VIID~p 213 (322)
T TIGR03815 148 GLRWPDLS-QARGRLPAGALRDALPR---RGGLSVLSWGRAV-GAALPPAAVRAVLDAARRGGDLVVVDLP 213 (322)
T ss_pred CcCHHHHh-hcCCCcCHHHHHHhCCC---cCCeEEEecCCCC-cCCCCHHHHHHHHHHHHhcCCEEEEeCC
Confidence 0 010 11234566667666643 2235555655544 3457788888888888776568899987
No 410
>cd06569 GH20_Sm-chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=56.62 E-value=29 Score=35.55 Aligned_cols=76 Identities=9% Similarity=0.025 Sum_probs=47.9
Q ss_pred HHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCc------EEEE--e-CCC--CCCCCCCCCHHHHHHHHHHHH
Q 012238 191 KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGS------FILL--H-GCA--HNPTGIDPTPEQWEKIADVIQ 259 (467)
Q Consensus 191 ~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~------~~i~--i-~~p--~NPTG~~~~~~~l~~l~~~~~ 259 (467)
...+..++.++..+.+.|+.+|.+.++.+.+..+....+. ..+. . ..+ ..+.|-.|+.+|+++|++.|+
T Consensus 28 Id~ma~~K~N~lHlHLtDdqgwriei~~~P~Lt~~ga~r~~~~~~~~~~~~~~~~~~~~~~~~~g~YT~~di~eiv~yA~ 107 (445)
T cd06569 28 LDQMAAYKLNKLHLHLTDDEGWRLEIPGLPELTEVGAKRCHDLSETTCLLPQLGSGPDTNNSGSGYYSRADYIEILKYAK 107 (445)
T ss_pred HHHHHHhCCceEEEEeecCCCcceeccCCchhhhcccccccccccccccccccccCcccCcccCCccCHHHHHHHHHHHH
Confidence 3455567778888888777778777776655433100000 0000 0 011 124466899999999999999
Q ss_pred hcCCeeE
Q 012238 260 EKNHIPF 266 (467)
Q Consensus 260 ~~~~~li 266 (467)
++||-||
T Consensus 108 ~rgI~VI 114 (445)
T cd06569 108 ARHIEVI 114 (445)
T ss_pred HcCCEEE
Confidence 9999877
No 411
>cd06563 GH20_chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This GH20 domain family includes an N-acetylglucosamidase (GlcNAcase A) from Pseudoalteromonas piscicida and an N-acetylhexosaminidase (SpHex) from Streptomyces plicatus. SpHex lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=55.29 E-value=31 Score=34.23 Aligned_cols=75 Identities=12% Similarity=0.091 Sum_probs=46.0
Q ss_pred HHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCC-CCcEEE---EeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeE
Q 012238 192 NIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP-GGSFIL---LHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPF 266 (467)
Q Consensus 192 ~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~-~~~~~i---~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li 266 (467)
..+..++.+...+.+.|+.+|.+....+.+.-.... .....+ -...-..|.|-.|+.+|+++|++.|+++|+-||
T Consensus 25 d~ma~~K~N~lhlHltDdq~~rle~~~~P~Lt~~ga~~~~~~~~~~~~~~~~~~~~~~YT~~di~eiv~yA~~rgI~VI 103 (357)
T cd06563 25 DLMALYKLNVFHWHLTDDQGWRIEIKKYPKLTEVGAWRGPTEIGLPQGGGDGTPYGGFYTQEEIREIVAYAAERGITVI 103 (357)
T ss_pred HHHHHhccceEEEeeecCCCceecccCcchhhhcccccCcccccccccccCCCccCceECHHHHHHHHHHHHHcCCEEE
Confidence 344556777777777666677776665554322100 000000 001123355778999999999999999999887
No 412
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=54.45 E-value=3.1e+02 Score=29.53 Aligned_cols=141 Identities=13% Similarity=0.127 Sum_probs=71.0
Q ss_pred chHHHHHHHHHHHhcCCCCcCCCCc-----c----hHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHH
Q 012238 102 VLDVVKKAENLMLERGENKEYLPIE-----G----LAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIE 172 (467)
Q Consensus 102 ~~~~v~~a~~~~~~~~~~~~Y~~~~-----G----~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~ 172 (467)
+|+.+.+-+-+ +.++..+|.|.+ | +-.+...++++ .|.++....+ .--||.|-+.++ +..
T Consensus 132 vP~~I~RNile--np~W~TqYTPYQ~EIsQGRLEsllNyQTmi~dl----TGL~~aNASL----LDEgTAaaEAm~-l~~ 200 (1001)
T KOG2040|consen 132 VPAVILRNILE--NPGWYTQYTPYQAEISQGRLESLLNYQTMITDL----TGLPMANASL----LDEGTAAAEAMA-LCN 200 (1001)
T ss_pred CcHHHHHHhhh--CCcceeccCCCchhhhhhhHHHHhhhHHhhhhc----cCCcccchhh----hccchhHHHHHH-HHH
Confidence 35665543333 356778888743 2 11222333333 2333332222 345566555542 233
Q ss_pred HhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHH
Q 012238 173 RYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWE 252 (467)
Q Consensus 173 ~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~ 252 (467)
...++.+.++.+-+++.....++.. ++...+.+. ..|+++..... ....-+++-.|. --|.+.+ +.
T Consensus 201 ~~~krkk~vvd~~~hpqtlsV~~TR-a~~~~i~v~-----~~~~~~~~~s~----~~v~gvlvQYP~-t~G~i~d---~~ 266 (1001)
T KOG2040|consen 201 RINKRKKFVVDSNCHPQTLSVVKTR-AKGFGIKVV-----VSDIKEADYSS----KDVSGVLVQYPD-TEGSVLD---FD 266 (1001)
T ss_pred hhcccceEEecCCCCcchhhhhhcc-ccccceeEE-----ecCHHHhhccc----cceeEEEEEcCC-CCCcccC---HH
Confidence 4557778999999999888777531 111111111 02322221111 233445544453 2355555 55
Q ss_pred HHHHHHHhcCCeeEE
Q 012238 253 KIADVIQEKNHIPFF 267 (467)
Q Consensus 253 ~l~~~~~~~~~~li~ 267 (467)
++++.+++.|.+++.
T Consensus 267 el~~~a~~~~s~vv~ 281 (1001)
T KOG2040|consen 267 ELVELAHANGSLVVM 281 (1001)
T ss_pred HHHHHhhccCceEEE
Confidence 677778888877664
No 413
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=53.65 E-value=21 Score=38.00 Aligned_cols=37 Identities=22% Similarity=0.301 Sum_probs=31.1
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCC
Q 012238 241 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASG 277 (467)
Q Consensus 241 PTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~ 277 (467)
||-..-++++++++++.|.++||-||.|-+|.+|..+
T Consensus 206 p~sryGtPedfk~fVD~aH~~GIgViLD~V~~HF~~d 242 (628)
T COG0296 206 PTSRYGTPEDFKALVDAAHQAGIGVILDWVPNHFPPD 242 (628)
T ss_pred ccccCCCHHHHHHHHHHHHHcCCEEEEEecCCcCCCC
Confidence 3334445999999999999999999999999998753
No 414
>COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) [DNA replication, recombination, and repair]
Probab=51.55 E-value=41 Score=28.44 Aligned_cols=55 Identities=18% Similarity=0.199 Sum_probs=40.3
Q ss_pred CChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHH-HHHHHHHHHHh-cCCee-EEecc
Q 012238 214 LDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPE-QWEKIADVIQE-KNHIP-FFDVA 270 (467)
Q Consensus 214 ~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~-~l~~l~~~~~~-~~~~l-i~Dea 270 (467)
.|++.+.+.+++. ....+++..|.|..|...+.. ..+++++..++ .++.+ +.||=
T Consensus 40 ~~~~~l~~li~~~--~~~~vVVGlP~~m~g~~~~~~~~~~~f~~~L~~r~~lpv~l~DER 97 (141)
T COG0816 40 QDFNALLKLVKEY--QVDTVVVGLPLNMDGTEGPRAELARKFAERLKKRFNLPVVLWDER 97 (141)
T ss_pred hhHHHHHHHHHHh--CCCEEEEecCcCCCCCcchhHHHHHHHHHHHHHhcCCCEEEEcCc
Confidence 5999999999874 556788899999999988854 36666666654 45544 46765
No 415
>PF00728 Glyco_hydro_20: Glycosyl hydrolase family 20, catalytic domain; InterPro: IPR015883 Glycoside hydrolase family 20 GH20 from CAZY comprises enzymes with several known activities; beta-hexosaminidase (3.2.1.52 from EC); lacto-N-biosidase (3.2.1.140 from EC). Carbonyl oxygen of the C-2 acetamido group of the substrate acts as the catalytic nucleophile/base in this family of enzymes. In the brain and other tissues, beta-hexosaminidase A degrades GM2 gangliosides; specifically, the enzyme hydrolyses terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides. There are 3 forms of beta-hexosaminidase: hexosaminidase A is a trimer, with one alpha, one beta-A and one beta-B chain; hexosaminidase B is a tetramer of two beta-A and two beta-B chains; and hexosaminidase S is a homodimer of alpha chains. The two beta chains are derived from the cleavage of a precursor. Mutations in the beta-chain lead to Sandhoff disease, a lysosomal storage disorder characterised by accumulation of GM2 ganglioside [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds; PDB: 3RPM_A 1C7T_A 1QBA_A 1QBB_A 1C7S_A 3RCN_A 2YL8_A 2YL6_A 2YLL_A 2YL5_C ....
Probab=51.27 E-value=15 Score=36.10 Aligned_cols=67 Identities=9% Similarity=-0.009 Sum_probs=44.6
Q ss_pred HHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeE
Q 012238 191 KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPF 266 (467)
Q Consensus 191 ~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li 266 (467)
...+..++.+...+.+.+..+|.+....+.+.-..... .++.+ |..|+.+|+++|++.|+++|+-||
T Consensus 24 id~ma~~k~N~lhlhl~D~~~~~~~~~~~p~l~~~ga~--------~~~~~-~~~yT~~di~~lv~yA~~~gI~VI 90 (351)
T PF00728_consen 24 IDQMAYYKLNVLHLHLSDDQGFRLESKSYPELTEKGAY--------RPSDA-GGYYTKEDIRELVAYAKERGIEVI 90 (351)
T ss_dssp HHHHHHTT-SEEEEEEESSTCB-BEBSTSTHHHHTTTE--------STTCT-ESEBEHHHHHHHHHHHHHTT-EEE
T ss_pred HHHHHHcCCcEEEEEEecCCCCccccCCCccccccCcc--------ccccc-cccCCHHHHHHHHHHHHHcCCcee
Confidence 34556788888888887777787777666554432100 00113 449999999999999999998887
No 416
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=50.81 E-value=48 Score=26.60 Aligned_cols=67 Identities=12% Similarity=0.084 Sum_probs=42.9
Q ss_pred HHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhc--CCeeEEe
Q 012238 191 KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEK--NHIPFFD 268 (467)
Q Consensus 191 ~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~--~~~li~D 268 (467)
..+++..|.++..++.. .+.+++.+.+.+. ++.++.++... ....+...++++..|+. ++.+++=
T Consensus 21 a~~l~~~G~~v~~~d~~------~~~~~l~~~~~~~--~pd~V~iS~~~-----~~~~~~~~~l~~~~k~~~p~~~iv~G 87 (121)
T PF02310_consen 21 AAYLRKAGHEVDILDAN------VPPEELVEALRAE--RPDVVGISVSM-----TPNLPEAKRLARAIKERNPNIPIVVG 87 (121)
T ss_dssp HHHHHHTTBEEEEEESS------B-HHHHHHHHHHT--TCSEEEEEESS-----STHHHHHHHHHHHHHTTCTTSEEEEE
T ss_pred HHHHHHCCCeEEEECCC------CCHHHHHHHHhcC--CCcEEEEEccC-----cCcHHHHHHHHHHHHhcCCCCEEEEE
Confidence 44667789988877652 4558888877764 33355554332 23367788888888776 6777764
Q ss_pred cc
Q 012238 269 VA 270 (467)
Q Consensus 269 ea 270 (467)
..
T Consensus 88 G~ 89 (121)
T PF02310_consen 88 GP 89 (121)
T ss_dssp ES
T ss_pred CC
Confidence 44
No 417
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=50.62 E-value=89 Score=26.19 Aligned_cols=57 Identities=9% Similarity=-0.042 Sum_probs=36.0
Q ss_pred HHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhc
Q 012238 192 NIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEK 261 (467)
Q Consensus 192 ~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~ 261 (467)
..++..|++++++-. ...++++.++..+ .++.++.+++-... .....+++.+.+++.
T Consensus 25 ~~lr~~G~eVi~LG~------~vp~e~i~~~a~~--~~~d~V~lS~~~~~-----~~~~~~~~~~~L~~~ 81 (137)
T PRK02261 25 RALTEAGFEVINLGV------MTSQEEFIDAAIE--TDADAILVSSLYGH-----GEIDCRGLREKCIEA 81 (137)
T ss_pred HHHHHCCCEEEECCC------CCCHHHHHHHHHH--cCCCEEEEcCcccc-----CHHHHHHHHHHHHhc
Confidence 456778888887644 2556777777765 44556666554432 255667777777766
No 418
>PLN02955 8-amino-7-oxononanoate synthase
Probab=49.90 E-value=3.2e+02 Score=28.37 Aligned_cols=159 Identities=11% Similarity=0.049 Sum_probs=84.7
Q ss_pred CcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhC--
Q 012238 120 KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDA-- 197 (467)
Q Consensus 120 ~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~-- 197 (467)
..|......++++++..+-+ .++|......+. ..|-+.....+...++.+...+.+++.+-+|.....++...
T Consensus 110 ndYLGL~~~p~v~~a~~~ai-~~yG~g~~gSrl----~~G~~~~h~~LE~~LA~f~g~e~all~sSGy~AN~~~i~aL~~ 184 (476)
T PLN02955 110 NDYLGLSSHPTISNAAANAA-KEYGMGPKGSAL----ICGYTTYHRLLESSLADLKKKEDCLVCPTGFAANMAAMVAIGS 184 (476)
T ss_pred cCccCCCCCHHHHHHHHHHH-HHcCCCCCCcCc----cccChHHHHHHHHHHHHHHCCCcEEEECChHHHHHHHHHHHhh
Confidence 67888888999999988885 445543333343 24444433334445666665567777787886655555432
Q ss_pred -------------CCC-eEEeeeecCCCCCCChhhHHHHHHcCCC--CcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhc
Q 012238 198 -------------RVP-WSEYRYYDPKTVGLDFEGMIADIKAAPG--GSFILLHGCAHNPTGIDPTPEQWEKIADVIQEK 261 (467)
Q Consensus 198 -------------G~~-~~~v~~~~~~~~~~d~~~l~~~l~~~~~--~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~ 261 (467)
+-. ++.++ . ..-.-+..-++-... ...++. .+|| +.+.++++.+-+++.
T Consensus 185 ~~~~~~~~~~~~~~~~d~i~~D---~----~~HaSI~dG~~ls~~~~~a~~~~--f~HN------D~~~Le~~L~~~~~~ 249 (476)
T PLN02955 185 VASLLAASGKPLKNEKVAIFSD---A----LNHASIIDGVRLAERQGNVEVFV--YRHC------DMYHLNSLLSSCKMK 249 (476)
T ss_pred ccccccccccccCCCCcEEEEe---c----cchHHHHHHHHhccccCCceEEE--eCCC------CHHHHHHHHHhCCCC
Confidence 111 12221 1 122333333332111 223333 2353 357788887666666
Q ss_pred CCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEec
Q 012238 262 NHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQS 301 (467)
Q Consensus 262 ~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S 301 (467)
..+||+|-+|.--..- .+...+..+.....-.+++.-
T Consensus 250 ~~~Vv~EgV~SmdGdi---apL~eL~~L~~~~ga~LiVDE 286 (476)
T PLN02955 250 RKVVVTDSLFSMDGDF---APMEELSQLRKKYGFLLVIDD 286 (476)
T ss_pred ceEEEEeCCCCCCCCc---CCHHHHHHHHHHcCcEEEEcc
Confidence 7899999997644321 122334444444444555544
No 419
>KOG2741 consensus Dimeric dihydrodiol dehydrogenase [Carbohydrate transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=48.44 E-value=62 Score=31.64 Aligned_cols=76 Identities=16% Similarity=0.309 Sum_probs=51.3
Q ss_pred CCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCe
Q 012238 185 PTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHI 264 (467)
Q Consensus 185 P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~ 264 (467)
-.|+.|.+.++.-.+++++++...+ .-.+-+...+.. .+. +++ .-|. .++.+|.++|++.|+++| +
T Consensus 59 k~y~syEeLakd~~vDvVyi~~~~~----qH~evv~l~l~~--~K~-VL~----EKPl--a~n~~e~~~iveaA~~rg-v 124 (351)
T KOG2741|consen 59 KAYGSYEELAKDPEVDVVYISTPNP----QHYEVVMLALNK--GKH-VLC----EKPL--AMNVAEAEEIVEAAEARG-V 124 (351)
T ss_pred ccccCHHHHhcCCCcCEEEeCCCCc----cHHHHHHHHHHc--CCc-EEe----cccc--cCCHHHHHHHHHHHHHcC-c
Confidence 3678999999999999999987322 223444444542 232 433 4554 467899999999999999 5
Q ss_pred eEEeccCCCC
Q 012238 265 PFFDVAYQGF 274 (467)
Q Consensus 265 li~Deay~~~ 274 (467)
.+.|..+.-+
T Consensus 125 ~~meg~~~R~ 134 (351)
T KOG2741|consen 125 FFMEGLWWRF 134 (351)
T ss_pred EEEeeeeeec
Confidence 5566665443
No 420
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=47.86 E-value=95 Score=24.94 Aligned_cols=59 Identities=8% Similarity=0.040 Sum_probs=36.3
Q ss_pred HHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcC
Q 012238 191 KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKN 262 (467)
Q Consensus 191 ~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~ 262 (467)
...++..|++++.+.. ...++++.+.+.+ .++.++.++.-.. ...+...++++.+++.+
T Consensus 20 ~~~l~~~G~~V~~lg~------~~~~~~l~~~~~~--~~pdvV~iS~~~~-----~~~~~~~~~i~~l~~~~ 78 (119)
T cd02067 20 ARALRDAGFEVIDLGV------DVPPEEIVEAAKE--EDADAIGLSGLLT-----THMTLMKEVIEELKEAG 78 (119)
T ss_pred HHHHHHCCCEEEECCC------CCCHHHHHHHHHH--cCCCEEEEecccc-----ccHHHHHHHHHHHHHcC
Confidence 3456778888865532 2567778777765 3444555554322 23567788888888763
No 421
>TIGR02012 tigrfam_recA protein RecA. This model describes orthologs of the recA protein. RecA promotes hybridization of homolgous regions of DNA. A segment of ssDNA can be hybridized to another ssDNA region, or to a dsDNA region. ATP is hydrolyzed in the process. Part of the SOS respones, it is regulated by LexA via autocatalytic cleavage.
Probab=47.79 E-value=1e+02 Score=30.12 Aligned_cols=21 Identities=5% Similarity=0.037 Sum_probs=13.5
Q ss_pred HHHHHcccEEEeCCCeEEecc
Q 012238 426 DNMTNKWHVYMTKDGRISLAG 446 (467)
Q Consensus 426 ~~ll~~~gI~v~~ggRis~~~ 446 (467)
-++..++||.-.+|+..+|..
T Consensus 271 ~~~a~~~g~i~k~g~w~~~~~ 291 (321)
T TIGR02012 271 IDLAVELDIIKKAGSWYSYGD 291 (321)
T ss_pred HHHHHhCCcEEcccCEEEECC
Confidence 334445688888887666654
No 422
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=47.04 E-value=89 Score=25.43 Aligned_cols=57 Identities=7% Similarity=0.002 Sum_probs=35.7
Q ss_pred HHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhc
Q 012238 192 NIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEK 261 (467)
Q Consensus 192 ~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~ 261 (467)
..++..|++++.... ...++++.+...+ .++.+++++.-.+ ...+.++++++.+++.
T Consensus 21 ~~l~~~G~~vi~lG~------~vp~e~~~~~a~~--~~~d~V~iS~~~~-----~~~~~~~~~~~~L~~~ 77 (122)
T cd02071 21 RALRDAGFEVIYTGL------RQTPEEIVEAAIQ--EDVDVIGLSSLSG-----GHMTLFPEVIELLREL 77 (122)
T ss_pred HHHHHCCCEEEECCC------CCCHHHHHHHHHH--cCCCEEEEcccch-----hhHHHHHHHHHHHHhc
Confidence 356778888877643 1456666666665 4555666665432 2256677888877776
No 423
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=46.59 E-value=65 Score=25.69 Aligned_cols=21 Identities=24% Similarity=0.257 Sum_probs=12.2
Q ss_pred CHHHHHHHHHHHHhcCCeeEE
Q 012238 247 TPEQWEKIADVIQEKNHIPFF 267 (467)
Q Consensus 247 ~~~~l~~l~~~~~~~~~~li~ 267 (467)
+.++.++|.+.++++|..+.+
T Consensus 98 ~~~~~~~l~~~a~~~~~~~~V 118 (120)
T PF01408_consen 98 TLEEAEELVEAAKEKGVKVMV 118 (120)
T ss_dssp SHHHHHHHHHHHHHHTSCEEE
T ss_pred CHHHHHHHHHHHHHhCCEEEE
Confidence 455666666666666655443
No 424
>KOG1465 consensus Translation initiation factor 2B, beta subunit (eIF-2Bbeta/GCD7) [Translation, ribosomal structure and biogenesis]
Probab=46.41 E-value=2.8e+02 Score=26.71 Aligned_cols=107 Identities=12% Similarity=0.057 Sum_probs=64.0
Q ss_pred cCceeeeecCCchhHHHHHHHHHHHhCCCC--EEEEcC--CCCcchHHHHh--hCCCCeEEeeeecCCCCCCChhhHHHH
Q 012238 149 EQRVATVQGLSGTGSLRLAAALIERYFPGA--KVLISS--PTWGNHKNIFN--DARVPWSEYRYYDPKTVGLDFEGMIAD 222 (467)
Q Consensus 149 ~~~i~~~~t~ggt~al~l~~~~l~~~~~gd--~Vlv~~--P~y~~~~~~~~--~~G~~~~~v~~~~~~~~~~d~~~l~~~ 222 (467)
.++|++ |.|.+...+.. +.....+|. +|+|.+ |.+.++..+-+ ..|++...++. ..+-+.
T Consensus 162 snEviL--T~g~SrTV~~F--L~~A~kk~Rkf~viVaE~~p~~qgH~~Ak~la~~giettVI~d----------aaVfA~ 227 (353)
T KOG1465|consen 162 SNEVIL--TLGSSRTVENF--LKHAAKKGRKFRVIVAEGAPNNQGHELAKPLAQAGIETTVIPD----------AAVFAM 227 (353)
T ss_pred cCceEE--ecCccHHHHHH--HHHHHhccCceEEEEeecCCcccchHhhHHHHHcCCeeEEecc----------HHHHHH
Confidence 568888 88877777664 233344544 566665 66665544433 45666555432 344444
Q ss_pred HHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCC
Q 012238 223 IKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ 272 (467)
Q Consensus 223 l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~ 272 (467)
+.+ -.++|+-+..--+.|.+....-...++..+|+|-+++|+=.-..
T Consensus 228 Msr---VnKVIigt~avl~NGgl~~~~G~~~vAlaAk~h~vPv~VlAp~y 274 (353)
T KOG1465|consen 228 MSR---VNKVIIGTHAVLANGGLRAPSGVHTVALAAKHHSVPVIVLAPMY 274 (353)
T ss_pred hhh---cceEEEEeeeEecCCCeeccchHHHHHHHHHhcCCcEEEecchh
Confidence 442 23455544444555666666667788888898888888755433
No 425
>PRK04302 triosephosphate isomerase; Provisional
Probab=44.79 E-value=2.3e+02 Score=25.85 Aligned_cols=22 Identities=9% Similarity=0.007 Sum_probs=16.9
Q ss_pred CCHHHHHHHHHHHHhcCCeeEE
Q 012238 246 PTPEQWEKIADVIQEKNHIPFF 267 (467)
Q Consensus 246 ~~~~~l~~l~~~~~~~~~~li~ 267 (467)
.+.+++.++++.|+++|+.+|.
T Consensus 98 ~~~~e~~~~v~~a~~~Gl~~I~ 119 (223)
T PRK04302 98 LTLADIEAVVERAKKLGLESVV 119 (223)
T ss_pred cCHHHHHHHHHHHHHCCCeEEE
Confidence 3456788888888888887776
No 426
>PRK09354 recA recombinase A; Provisional
Probab=44.76 E-value=1.4e+02 Score=29.57 Aligned_cols=58 Identities=14% Similarity=0.106 Sum_probs=33.1
Q ss_pred cCceeeeecCCchhHHHHHHHHHHHh-CCCCEEEEcCCCCcchHHHHhhCCCCeEEeee
Q 012238 149 EQRVATVQGLSGTGSLRLAAALIERY-FPGAKVLISSPTWGNHKNIFNDARVPWSEYRY 206 (467)
Q Consensus 149 ~~~i~~~~t~ggt~al~l~~~~l~~~-~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~ 206 (467)
...|..+....|++=-.++.+++... ..|..++..+.........++..|.++..+-+
T Consensus 59 ~G~IteI~G~~GsGKTtLal~~~~~~~~~G~~~~yId~E~s~~~~~a~~lGvdld~lli 117 (349)
T PRK09354 59 RGRIVEIYGPESSGKTTLALHAIAEAQKAGGTAAFIDAEHALDPVYAKKLGVDIDNLLV 117 (349)
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEECCccchHHHHHHHcCCCHHHeEE
Confidence 34454444566666555554444332 35667777666665556677777776554433
No 427
>smart00642 Aamy Alpha-amylase domain.
Probab=44.47 E-value=33 Score=29.86 Aligned_cols=28 Identities=18% Similarity=0.279 Sum_probs=24.7
Q ss_pred CHHHHHHHHHHHHhcCCeeEEeccCCCC
Q 012238 247 TPEQWEKIADVIQEKNHIPFFDVAYQGF 274 (467)
Q Consensus 247 ~~~~l~~l~~~~~~~~~~li~Deay~~~ 274 (467)
+.++++++++.|+++|+-||.|-++-+.
T Consensus 68 t~~d~~~lv~~~h~~Gi~vilD~V~NH~ 95 (166)
T smart00642 68 TMEDFKELVDAAHARGIKVILDVVINHT 95 (166)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECCCCC
Confidence 4799999999999999999999995544
No 428
>PF03652 UPF0081: Uncharacterised protein family (UPF0081); InterPro: IPR005227 Holliday junction resolvases (HJRs) are key enzymes of DNA recombination. The principal HJRs are now known or confidently predicted for all bacteria and archaea whose genomes have been completely sequenced, with many species encoding multiple potential HJRs. Structural and evolutionary relationships of HJRs and related nucleases suggests that the HJR function has evolved independently from at least four distinct structural folds, namely RNase H, endonuclease, endonuclease VII-colicin E and RusA (IPR008822 from INTERPRO): The endonuclease fold, whose structural prototypes are the phage exonuclease, the very short patch repair nuclease (Vsr) and type II restriction enzymes, is shown to encompass by far a greater diversity of nucleases than previously suspected. This fold unifies archaeal HJRs (IPR002732 from INTERPRO), repair nucleases such as RecB (IPR004586 from INTERPRO) and Vsr (IPR004603 from INTERPRO), restriction enzymes and a variety of predicted nucleases whose specific activities remain to be determined. The RNase H fold characterises the RuvC family (IPR002176 from INTERPRO), which is nearly ubiquitous in bacteria, and in addition the YqgF family (IPR005227 from INTERPRO). The proteins of this family, typified by Escherichia coli YqgF, are likely to function as an alternative to RuvC in most bacteria, but could be the principal HJRs in low-GC Gram-positive bacteria and Aquifex. Endonuclease VII of phage T4 (IPR004211 from INTERPRO) is shown to serve as a structural template for many nucleases, including McrA and other type II restriction enzymes. Together with colicin E7, endonuclease VII defines a distinct metal-dependent nuclease fold. Horizontal gene transfer, lineage-specific gene loss and gene family expansion, and non-orthologous gene displacement seem to have been major forces in the evolution of HJRs and related nucleases. A remarkable case of displacement is seen in the Lyme disease spirochete Borrelia burgdorferi, which does not possess any of the typical HJRs, but instead encodes, in its chromosome and each of the linear plasmids, members of the exonuclease family predicted to function as HJRs. The diversity of HJRs and related nucleases in bacteria and archaea contrasts with their near absence in eukaryotes. The few detected eukaryotic representatives of the endonuclease fold and the RNase H fold have probably been acquired from bacteria via horizontal gene transfer. The identity of the principal HJR(s) involved in recombination in eukaryotes remains uncertain; this function could be performed by topoisomerase IB or by a novel, so far undetected, class of enzymes. Likely HJRs and related nucleases were identified in the genomes of numerous bacterial and eukaryotic DNA viruses. Gene flow between viral and cellular genomes has probably played a major role in the evolution of this class of enzymes. This family represents the YqgF family of putative Holliday junction resolvases. With the exception of the spirochetes, the YqgF family is represented in all bacterial lineages, including the mycoplasmas with their highly degenerate genomes. The RuvC resolvases are conspicuously absent in the low-GC Gram-positive bacterial lineage, with the exception of Ureaplasma parvum (Ureaplasma urealyticum biotype 1) (Q9PQY7 from SWISSPROT, []). Furthermore, loss of function ruvC mutants of E. coli show a residual HJR activity that cannot be ascribed to the prophage-encoded RusA resolvase []. This suggests that the YqgF family proteins could be alternative HJRs whose function partially overlaps with that of RuvC [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006281 DNA repair, 0006310 DNA recombination, 0006974 response to DNA damage stimulus, 0005737 cytoplasm; PDB: 1NU0_A 1OVQ_A 1NMN_B 1VHX_B 1IV0_A.
Probab=43.47 E-value=96 Score=25.94 Aligned_cols=61 Identities=15% Similarity=0.091 Sum_probs=42.1
Q ss_pred CCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCH-HHHHHHHHHHHhc--CCeeE-EeccCCC
Q 012238 211 TVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTP-EQWEKIADVIQEK--NHIPF-FDVAYQG 273 (467)
Q Consensus 211 ~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~-~~l~~l~~~~~~~--~~~li-~Deay~~ 273 (467)
+...+++.+.+.+++ .....+++..|-|..|..-+. +..+++++..++. ++.|+ +||-|..
T Consensus 35 ~~~~~~~~l~~li~~--~~i~~iVvGlP~~~~G~~~~~~~~v~~f~~~L~~~~~~ipV~~~DEr~TT 99 (135)
T PF03652_consen 35 NREKDIEELKKLIEE--YQIDGIVVGLPLNMDGSESEQARRVRKFAEELKKRFPGIPVILVDERLTT 99 (135)
T ss_dssp CCCCCHHHHHHHHHH--CCECEEEEEEEBBCTSSC-CCHHHHHHHHHHHHHHH-TSEEEEEECSCSH
T ss_pred CCchHHHHHHHHHHH--hCCCEEEEeCCcccCCCccHHHHHHHHHHHHHHHhcCCCcEEEECCChhH
Confidence 346899999999987 455678889998888876543 3455555555543 76554 8998654
No 429
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=42.72 E-value=97 Score=25.93 Aligned_cols=60 Identities=12% Similarity=0.032 Sum_probs=41.6
Q ss_pred HHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCC
Q 012238 191 KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNH 263 (467)
Q Consensus 191 ~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~ 263 (467)
..+++..|++++.+..+ ..++++.++..+ .+..++.+++-. | -+.+.++++.+.+++.|+
T Consensus 22 ~~~l~~~GfeVi~LG~~------v~~e~~v~aa~~--~~adiVglS~l~---~--~~~~~~~~~~~~l~~~gl 81 (134)
T TIGR01501 22 DHAFTNAGFNVVNLGVL------SPQEEFIKAAIE--TKADAILVSSLY---G--HGEIDCKGLRQKCDEAGL 81 (134)
T ss_pred HHHHHHCCCEEEECCCC------CCHHHHHHHHHH--cCCCEEEEeccc---c--cCHHHHHHHHHHHHHCCC
Confidence 44678899999887653 567777777765 455577766544 2 225678889988988864
No 430
>PRK05678 succinyl-CoA synthetase subunit alpha; Validated
Probab=42.64 E-value=1.3e+02 Score=28.87 Aligned_cols=47 Identities=13% Similarity=0.084 Sum_probs=27.7
Q ss_pred ChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEecc
Q 012238 215 DFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVA 270 (467)
Q Consensus 215 d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Dea 270 (467)
-++.+++..+. .-..+++++. | ++.++-++|.++++++|+.++==.+
T Consensus 78 v~~~l~e~~~~--gvk~avI~s~-----G--f~~~~~~~l~~~a~~~girvlGPNc 124 (291)
T PRK05678 78 AADAILEAIDA--GIDLIVCITE-----G--IPVLDMLEVKAYLERKKTRLIGPNC 124 (291)
T ss_pred HHHHHHHHHHC--CCCEEEEECC-----C--CCHHHHHHHHHHHHHcCCEEECCCC
Confidence 35566665552 2223444443 2 2345456899999999998884444
No 431
>cd02072 Glm_B12_BD B12 binding domain of glutamate mutase (Glm). Glutamate mutase catalysis the conversion of (S)-glutamate with (2S,3S)-3-methylaspartate. The rearrangement reaction is initiated by the extraction of a hydrogen from the protein-bound substrate by a 5'-desoxyadenosyl radical, which is generated by the homolytic cleavage of the organometallic bond of the cofactor B12. Glm is a heterotetrameric molecule consisting of two alpha and two epsilon polypeptide chains.
Probab=42.17 E-value=1e+02 Score=25.53 Aligned_cols=59 Identities=10% Similarity=0.016 Sum_probs=39.8
Q ss_pred HHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCC
Q 012238 192 NIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNH 263 (467)
Q Consensus 192 ~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~ 263 (467)
.+++.+|++++.+..+ ..++.+.++..+ .++.++.+++-...| .+..+++.+.++++|+
T Consensus 21 ~~L~~~GfeVidLG~~------v~~e~~v~aa~~--~~adiVglS~L~t~~-----~~~~~~~~~~l~~~gl 79 (128)
T cd02072 21 HAFTEAGFNVVNLGVL------SPQEEFIDAAIE--TDADAILVSSLYGHG-----EIDCKGLREKCDEAGL 79 (128)
T ss_pred HHHHHCCCEEEECCCC------CCHHHHHHHHHH--cCCCEEEEeccccCC-----HHHHHHHHHHHHHCCC
Confidence 4677889998887652 456777776665 455677766544222 5677888888888764
No 432
>PF05687 DUF822: Plant protein of unknown function (DUF822); InterPro: IPR008540 This group of proteins contains members of the BZR1/LAT61 family of plant transcriptional repressors involved in controlling the response to Brassinosteroids (BRs). BRs are plant hormones that play essential roles in growth and development. BZR1 binds directly to DNA repressing the synthesis of genes involved in BR synthesis. Phosphorylation of BZR1 by BIN1 targets BZR1 to the 20S proteosome, while dephosphorylation leads to nuclear accumulation of BZR1 [].
Probab=42.03 E-value=1.1e+02 Score=25.87 Aligned_cols=19 Identities=11% Similarity=0.071 Sum_probs=16.5
Q ss_pred HHHHHHHHHcccEEEeCCC
Q 012238 422 KAQSDNMTNKWHVYMTKDG 440 (467)
Q Consensus 422 ~~~~~~ll~~~gI~v~~gg 440 (467)
.+.+..|.+++|..|.++|
T Consensus 48 NeVLkALc~eAGw~Ve~DG 66 (150)
T PF05687_consen 48 NEVLKALCREAGWTVEPDG 66 (150)
T ss_pred HHHHHHHHHhCCEEEccCC
Confidence 5668889999999999987
No 433
>PRK10637 cysG siroheme synthase; Provisional
Probab=41.55 E-value=4.1e+02 Score=27.31 Aligned_cols=95 Identities=9% Similarity=0.069 Sum_probs=56.7
Q ss_pred ccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCC
Q 012238 148 KEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP 227 (467)
Q Consensus 148 ~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~ 227 (467)
+..+|++ ..||.-|..-+ ..++.-|.+|.|.+|.+..-...+...| ++..+.- . ++.++ ++
T Consensus 11 ~~~~vlv--vGgG~vA~rk~---~~ll~~ga~v~visp~~~~~~~~l~~~~-~i~~~~~----~--~~~~d----l~--- 71 (457)
T PRK10637 11 RDRDCLL--VGGGDVAERKA---RLLLDAGARLTVNALAFIPQFTAWADAG-MLTLVEG----P--FDESL----LD--- 71 (457)
T ss_pred CCCEEEE--ECCCHHHHHHH---HHHHHCCCEEEEEcCCCCHHHHHHHhCC-CEEEEeC----C--CChHH----hC---
Confidence 3567888 89999988876 3345567889898998864433333332 3333321 1 23232 32
Q ss_pred CCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeE-Eecc
Q 012238 228 GGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPF-FDVA 270 (467)
Q Consensus 228 ~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li-~Dea 270 (467)
...+++.++.+ .+.=++|.+.|++.++++- +|+.
T Consensus 72 -~~~lv~~at~d--------~~~n~~i~~~a~~~~~lvN~~d~~ 106 (457)
T PRK10637 72 -TCWLAIAATDD--------DAVNQRVSEAAEARRIFCNVVDAP 106 (457)
T ss_pred -CCEEEEECCCC--------HHHhHHHHHHHHHcCcEEEECCCc
Confidence 34566655433 4556788999999987654 5543
No 434
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=41.50 E-value=1.5e+02 Score=27.09 Aligned_cols=86 Identities=15% Similarity=0.127 Sum_probs=54.9
Q ss_pred cCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCC
Q 012238 149 EQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPG 228 (467)
Q Consensus 149 ~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~ 228 (467)
+..|++ |.++++++-.+. .......|-.|+...-.-....+.....|..+..+++.+++ .+-.++..+...+.
T Consensus 7 ~k~VlI--tgcs~GGIG~al-a~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~----~V~~v~~evr~~~~ 79 (289)
T KOG1209|consen 7 PKKVLI--TGCSSGGIGYAL-AKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPE----EVVTVSGEVRANPD 79 (289)
T ss_pred CCeEEE--eecCCcchhHHH-HHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChH----HHHHHHHHHhhCCC
Confidence 456777 888888887761 12234478888888777777777777889888888774332 33444444554445
Q ss_pred CcEEEEeCCCCCC
Q 012238 229 GSFILLHGCAHNP 241 (467)
Q Consensus 229 ~~~~i~i~~p~NP 241 (467)
+..=++++|..-|
T Consensus 80 Gkld~L~NNAG~~ 92 (289)
T KOG1209|consen 80 GKLDLLYNNAGQS 92 (289)
T ss_pred CceEEEEcCCCCC
Confidence 5555555554433
No 435
>COG0065 LeuC 3-isopropylmalate dehydratase large subunit [Amino acid transport and metabolism]
Probab=41.20 E-value=43 Score=33.20 Aligned_cols=75 Identities=19% Similarity=0.165 Sum_probs=51.0
Q ss_pred cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccC
Q 012238 230 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY 309 (467)
Q Consensus 230 ~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~ 309 (467)
.++++....+.||-..-..++.+.|.+.|+++|+.-+.|.--+++..--. +-.-+...+.-++.-.|.+-++|.-
T Consensus 57 ~k~~~~~DH~vPt~~~~~a~~~~~lr~~~ke~Gi~~~~~~g~~GI~H~v~-----pE~G~~~PG~~Iv~gDSHT~T~GAf 131 (423)
T COG0065 57 EKTVATFDHNVPTPDIKAAEQQKELRENAKEFGIVNFYDVGDQGIVHQVG-----PEQGLTLPGMTIVGGDSHTCTHGAF 131 (423)
T ss_pred cceEEEecCCCCCccHHHHHHHHHHHHHHHHhCCeeeecCCCCcEEEEEe-----ccccccCCCcEEEecccCcccchhh
Confidence 34555567788999888889999999999999988877655355543210 0001233455667778888888753
No 436
>TIGR00290 MJ0570_dom MJ0570-related uncharacterized domain. Proteins with this uncharacterized domain include two apparent ortholog families in the Archaea, one of which is universal among the first four completed archaeal genomes, and YLR143W, a much longer protein from Saccharomyces cerevisiae. The domain comprises the full length of the archaeal proteins and the first third of the yeast protein.
Probab=40.99 E-value=2.7e+02 Score=25.53 Aligned_cols=123 Identities=11% Similarity=0.009 Sum_probs=70.6
Q ss_pred cCCchhHHHHHHHHHHHhCCCCEEEE----cCC--CCc-------chHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHH
Q 012238 157 GLSGTGSLRLAAALIERYFPGAKVLI----SSP--TWG-------NHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADI 223 (467)
Q Consensus 157 t~ggt~al~l~~~~l~~~~~gd~Vlv----~~P--~y~-------~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l 223 (467)
.+||..+...+..++.. -+.+.+ +.. .|. -....++..|.+++.++... ...--.+.+.+.+
T Consensus 7 ~SGGKDS~~al~~a~~~---~~v~~L~t~~~~~~~s~~~H~~~~~~~~~qA~algipl~~~~~~~--~~e~~~e~l~~~l 81 (223)
T TIGR00290 7 ISGGKDSCLALYHALKE---HEVISLVNIMPENEESYMFHGVNAHLTDLQAESIGIPLIKLYTEG--TEEDEVEELKGIL 81 (223)
T ss_pred ecCcHHHHHHHHHHHHh---CeeEEEEEEecCCCCcccccccCHHHHHHHHHHcCCCeEEeecCC--CccHHHHHHHHHH
Confidence 68999988886333322 232221 111 121 12345678899887766521 2223456666666
Q ss_pred HcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEec
Q 012238 224 KAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQS 301 (467)
Q Consensus 224 ~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S 301 (467)
++. +...++ +|.+.+..++..+-++|.+.|+..+. .+ ++. ....-+..+.+.+-+.+++.-
T Consensus 82 ~~~--gv~~vv-------~GdI~s~~qr~~~e~v~~~lgl~~~~-----PL-W~~--~~~~ll~e~i~~G~~aiIv~v 142 (223)
T TIGR00290 82 HTL--DVEAVV-------FGAIYSEYQKTRIERVCRELGLKSFA-----PL-WHR--DPEKLMEEFVEEKFEARIIAV 142 (223)
T ss_pred HHc--CCCEEE-------ECCcccHHHHHHHHHHHHhcCCEEec-----cc-cCC--CHHHHHHHHHHcCCeEEEEEE
Confidence 653 333333 49999999999999999999986653 22 221 122345556666666655543
No 437
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=40.58 E-value=1.1e+02 Score=24.08 Aligned_cols=84 Identities=23% Similarity=0.194 Sum_probs=48.1
Q ss_pred cCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCC
Q 012238 149 EQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPG 228 (467)
Q Consensus 149 ~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~ 228 (467)
..++++ ..||..|..-+ ..++..|.+|.+.+|.. ...+ - .+...+ . .+ . + .+ .
T Consensus 7 ~~~vlV--vGgG~va~~k~---~~Ll~~gA~v~vis~~~----~~~~-~--~i~~~~---~-~~--~-~----~l----~ 59 (103)
T PF13241_consen 7 GKRVLV--VGGGPVAARKA---RLLLEAGAKVTVISPEI----EFSE-G--LIQLIR---R-EF--E-E----DL----D 59 (103)
T ss_dssp T-EEEE--EEESHHHHHHH---HHHCCCTBEEEEEESSE----HHHH-T--SCEEEE---S-S---G-G----GC----T
T ss_pred CCEEEE--ECCCHHHHHHH---HHHHhCCCEEEEECCch----hhhh-h--HHHHHh---h-hH--H-H----HH----h
Confidence 457777 78888887775 44567788898888886 1112 1 111111 1 11 1 1 12 2
Q ss_pred CcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEE
Q 012238 229 GSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFF 267 (467)
Q Consensus 229 ~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~ 267 (467)
+..+++.+..+ .+.-++|.+.|+++++++-+
T Consensus 60 ~~~lV~~at~d--------~~~n~~i~~~a~~~~i~vn~ 90 (103)
T PF13241_consen 60 GADLVFAATDD--------PELNEAIYADARARGILVNV 90 (103)
T ss_dssp TESEEEE-SS---------HHHHHHHHHHHHHTTSEEEE
T ss_pred hheEEEecCCC--------HHHHHHHHHHHhhCCEEEEE
Confidence 33455544333 55678899999999987653
No 438
>PRK11889 flhF flagellar biosynthesis regulator FlhF; Provisional
Probab=40.18 E-value=4.2e+02 Score=26.97 Aligned_cols=106 Identities=10% Similarity=0.035 Sum_probs=50.2
Q ss_pred eeeeecCCchhHHHHHHHHHHHh-CCCCEEEEcCC-CCc-----chHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHH
Q 012238 152 VATVQGLSGTGSLRLAAALIERY-FPGAKVLISSP-TWG-----NHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIK 224 (467)
Q Consensus 152 i~~~~t~ggt~al~l~~~~l~~~-~~gd~Vlv~~P-~y~-----~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~ 224 (467)
++.+...+|.|=-.+++.+...+ ..|-+|.+.+. +|. ......+..|+.+... .+++.+.+.+.
T Consensus 243 vI~LVGptGvGKTTTiaKLA~~L~~~GkkVglI~aDt~RiaAvEQLk~yae~lgipv~v~---------~d~~~L~~aL~ 313 (436)
T PRK11889 243 TIALIGPTGVGKTTTLAKMAWQFHGKKKTVGFITTDHSRIGTVQQLQDYVKTIGFEVIAV---------RDEAAMTRALT 313 (436)
T ss_pred EEEEECCCCCcHHHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHhhhcCCcEEec---------CCHHHHHHHHH
Confidence 33333556655444443333222 35656655443 332 2222333455444322 35666766665
Q ss_pred cCCC--CcEEEEeCC-CCCCCCCCCCHHHHHHHHHHHHh---cCCeeEEecc
Q 012238 225 AAPG--GSFILLHGC-AHNPTGIDPTPEQWEKIADVIQE---KNHIPFFDVA 270 (467)
Q Consensus 225 ~~~~--~~~~i~i~~-p~NPTG~~~~~~~l~~l~~~~~~---~~~~li~Dea 270 (467)
.... +..++++-+ +.|+ -+.+.+.++.++.+. +.++++.|..
T Consensus 314 ~lk~~~~~DvVLIDTaGRs~----kd~~lm~EL~~~lk~~~PdevlLVLsAT 361 (436)
T PRK11889 314 YFKEEARVDYILIDTAGKNY----RASETVEEMIETMGQVEPDYICLTLSAS 361 (436)
T ss_pred HHHhccCCCEEEEeCccccC----cCHHHHHHHHHHHhhcCCCeEEEEECCc
Confidence 4211 223444444 4444 234456666666654 4567777765
No 439
>cd00983 recA RecA is a bacterial enzyme which has roles in homologous recombination, DNA repair, and the induction of the SOS response. RecA couples ATP hydrolysis to DNA strand exchange.
Probab=40.13 E-value=1.5e+02 Score=28.93 Aligned_cols=52 Identities=17% Similarity=0.133 Sum_probs=25.5
Q ss_pred CceeeeecCCchhHHHHHHHHHHHh-CCCCEEEEcCCCCcchHHHHhhCCCCe
Q 012238 150 QRVATVQGLSGTGSLRLAAALIERY-FPGAKVLISSPTWGNHKNIFNDARVPW 201 (467)
Q Consensus 150 ~~i~~~~t~ggt~al~l~~~~l~~~-~~gd~Vlv~~P~y~~~~~~~~~~G~~~ 201 (467)
..+..+....|++=..++.++.... ..|..++..+.........++..|.++
T Consensus 55 G~iteI~Gp~GsGKTtLal~~~~~~~~~g~~~vyId~E~~~~~~~a~~lGvd~ 107 (325)
T cd00983 55 GRIIEIYGPESSGKTTLALHAIAEAQKLGGTVAFIDAEHALDPVYAKKLGVDL 107 (325)
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHHHcCCCEEEECccccHHHHHHHHcCCCH
Confidence 3444433555555555543333322 245566665555544445555555543
No 440
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=39.84 E-value=1.3e+02 Score=25.88 Aligned_cols=87 Identities=14% Similarity=0.153 Sum_probs=44.3
Q ss_pred CCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCC
Q 012238 158 LSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGC 237 (467)
Q Consensus 158 ~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~ 237 (467)
.|+|+.+-... +..++..|-+|.+..-.-..... ..+++++..++ .|++.+.+++.. -. .++.+.
T Consensus 4 ~GatG~vG~~l-~~~L~~~~~~V~~~~R~~~~~~~---~~~~~~~~~d~-------~d~~~~~~al~~---~d-~vi~~~ 68 (183)
T PF13460_consen 4 FGATGFVGRAL-AKQLLRRGHEVTALVRSPSKAED---SPGVEIIQGDL-------FDPDSVKAALKG---AD-AVIHAA 68 (183)
T ss_dssp ETTTSHHHHHH-HHHHHHTTSEEEEEESSGGGHHH---CTTEEEEESCT-------TCHHHHHHHHTT---SS-EEEECC
T ss_pred ECCCChHHHHH-HHHHHHCCCEEEEEecCchhccc---ccccccceeee-------hhhhhhhhhhhh---cc-hhhhhh
Confidence 45555444320 12234456666555433222222 33444443322 678899998873 22 444444
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCC
Q 012238 238 AHNPTGIDPTPEQWEKIADVIQEKNH 263 (467)
Q Consensus 238 p~NPTG~~~~~~~l~~l~~~~~~~~~ 263 (467)
+.++. ..+..+.+++.|++.++
T Consensus 69 ~~~~~----~~~~~~~~~~a~~~~~~ 90 (183)
T PF13460_consen 69 GPPPK----DVDAAKNIIEAAKKAGV 90 (183)
T ss_dssp HSTTT----HHHHHHHHHHHHHHTTS
T ss_pred hhhcc----ccccccccccccccccc
Confidence 33333 26667788888877653
No 441
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=39.65 E-value=2.7e+02 Score=24.64 Aligned_cols=98 Identities=11% Similarity=0.009 Sum_probs=42.4
Q ss_pred ceeeeecCCchhHHHHHHHHHHHhC---CCCEEEEcCCCCcchHHHHhhC--CCCeEEeeeecCCCCCCChhhHHHHHHc
Q 012238 151 RVATVQGLSGTGSLRLAAALIERYF---PGAKVLISSPTWGNHKNIFNDA--RVPWSEYRYYDPKTVGLDFEGMIADIKA 225 (467)
Q Consensus 151 ~i~~~~t~ggt~al~l~~~~l~~~~---~gd~Vlv~~P~y~~~~~~~~~~--G~~~~~v~~~~~~~~~~d~~~l~~~l~~ 225 (467)
.++-++..+.-+...+. .++..+. |+-.|++...+-.++..+.+.+ +..+.++|+| .+-.+.+.++.
T Consensus 22 ~~iWiHa~SvGE~~a~~-~Li~~l~~~~p~~~illT~~T~tg~~~~~~~~~~~v~~~~~P~D-------~~~~~~rfl~~ 93 (186)
T PF04413_consen 22 PLIWIHAASVGEVNAAR-PLIKRLRKQRPDLRILLTTTTPTGREMARKLLPDRVDVQYLPLD-------FPWAVRRFLDH 93 (186)
T ss_dssp T-EEEE-SSHHHHHHHH-HHHHHHTT---TS-EEEEES-CCHHHHHHGG-GGG-SEEE---S-------SHHHHHHHHHH
T ss_pred CcEEEEECCHHHHHHHH-HHHHHHHHhCCCCeEEEEecCCchHHHHHHhCCCCeEEEEeCcc-------CHHHHHHHHHH
Confidence 55555555555544443 3344443 6779999888777776665542 4556666662 23344444443
Q ss_pred CCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEe
Q 012238 226 APGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFD 268 (467)
Q Consensus 226 ~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~D 268 (467)
..++. ++++- -|-|-.++..|++.|+.++.=
T Consensus 94 ~~P~~-~i~~E-----------tElWPnll~~a~~~~ip~~Lv 124 (186)
T PF04413_consen 94 WRPDL-LIWVE-----------TELWPNLLREAKRRGIPVVLV 124 (186)
T ss_dssp H--SE-EEEES---------------HHHHHH-----S-EEEE
T ss_pred hCCCE-EEEEc-----------cccCHHHHHHHhhcCCCEEEE
Confidence 22443 33332 356778999999999866643
No 442
>PRK11865 pyruvate ferredoxin oxidoreductase subunit beta; Provisional
Probab=39.19 E-value=2.2e+02 Score=27.42 Aligned_cols=71 Identities=21% Similarity=0.222 Sum_probs=45.9
Q ss_pred HHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcC--CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEe
Q 012238 191 KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA--PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFD 268 (467)
Q Consensus 191 ~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~--~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~D 268 (467)
..++..+|+..+..-. . -+++++.+.+++. .+...+|.+-+|+ |+|.-++.++-.++.+++.+-+.|.+.-
T Consensus 168 ~~Ia~a~g~~YVA~~~--~----~~~~~l~~~i~~A~~~~Gps~I~v~sPC-~~~~~~~~~~~~~~~klAvetg~~plye 240 (299)
T PRK11865 168 PLIMAAHGIPYVATAS--I----GYPEDFMEKVKKAKEVEGPAYIQVLQPC-PTGWGFPPEKTIEIGRLAVETGYWPLFE 240 (299)
T ss_pred HHHHHHcCCCEEEEEe--C----CCHHHHHHHHHHHHhCCCCEEEEEECCC-CCCCCCCHHHHHHHHHHHHhcCceeEEE
Confidence 3455556665443211 1 2566666666542 2456666666666 5688889999999999999888777643
No 443
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=39.01 E-value=2.9e+02 Score=24.73 Aligned_cols=73 Identities=12% Similarity=0.093 Sum_probs=47.0
Q ss_pred CCEEEEcCCCCcc-------hHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHH
Q 012238 177 GAKVLISSPTWGN-------HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPE 249 (467)
Q Consensus 177 gd~Vlv~~P~y~~-------~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~ 249 (467)
+.+|++..+.-.. ....++..|++++.+.. ...++++.+.+.+ .++.++.++.-..++ ..
T Consensus 82 ~~~vl~~~~~gd~H~lG~~~v~~~l~~~G~~vi~lG~------~~p~~~l~~~~~~--~~~d~v~lS~~~~~~-----~~ 148 (201)
T cd02070 82 KGKVVIGTVEGDIHDIGKNLVATMLEANGFEVIDLGR------DVPPEEFVEAVKE--HKPDILGLSALMTTT-----MG 148 (201)
T ss_pred CCeEEEEecCCccchHHHHHHHHHHHHCCCEEEECCC------CCCHHHHHHHHHH--cCCCEEEEecccccc-----HH
Confidence 3466666544322 34567889999876643 2677888888876 345566655433332 56
Q ss_pred HHHHHHHHHHhcC
Q 012238 250 QWEKIADVIQEKN 262 (467)
Q Consensus 250 ~l~~l~~~~~~~~ 262 (467)
.++++++.+++.+
T Consensus 149 ~~~~~i~~lr~~~ 161 (201)
T cd02070 149 GMKEVIEALKEAG 161 (201)
T ss_pred HHHHHHHHHHHCC
Confidence 7888888888764
No 444
>TIGR00289 conserved hypothetical protein TIGR00289. Homologous proteins related to MJ0570 of Methanococcus jannaschii include both the apparent orthologs found by this model above the trusted cutoff, the much longer protein YLR143W from Saccharomyces cerevisiae, and second homologous proteins from Archaeoglobus fulgidus and Pyrococcus horikoshii that appear to represent a second orthologous group.
Probab=38.59 E-value=3.2e+02 Score=25.11 Aligned_cols=125 Identities=10% Similarity=0.046 Sum_probs=71.1
Q ss_pred cCCchhHHHHHHHHHHHhCCCCEEEEc--CCC------C-----cchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHH
Q 012238 157 GLSGTGSLRLAAALIERYFPGAKVLIS--SPT------W-----GNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADI 223 (467)
Q Consensus 157 t~ggt~al~l~~~~l~~~~~gd~Vlv~--~P~------y-----~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l 223 (467)
.+||..+...+..++.. .+.+.+. .|. | .-....++..|.+++.+... ....-..+++.+.+
T Consensus 7 ~SGGKDS~lAl~~~~~~---~~V~~L~~~~~~~~~s~~~h~~~~~~~~~qA~algiPl~~~~~~--~~~e~~~~~l~~~l 81 (222)
T TIGR00289 7 YSGGKDSILALYKALEE---HEVISLVGVFSENEESYMFHSPNLHLTDLVAEAVGIPLIKLYTS--GEEEKEVEDLAGQL 81 (222)
T ss_pred ecCcHHHHHHHHHHHHc---CeeEEEEEEcCCCCCccccccCCHHHHHHHHHHcCCCeEEEEcC--CchhHHHHHHHHHH
Confidence 68888888776333322 3322221 121 1 12344667889988777652 11222345555555
Q ss_pred HcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCc
Q 012238 224 KAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYS 303 (467)
Q Consensus 224 ~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~S 303 (467)
++. +...++ +|.+.+..+...+-++|.+.|+..+. .+ ++ .+...+..+.+.+-+.+++.--+
T Consensus 82 ~~~--gv~~vv-------~GdI~s~~qr~~~e~vc~~~gl~~~~-----PL-W~---~d~~~l~e~i~~Gf~aiIv~v~~ 143 (222)
T TIGR00289 82 GEL--DVEALC-------IGAIESNYQKSRIDKVCRELGLKSIA-----PL-WH---ADPEKLMYEVAEKFEVIIVSVSA 143 (222)
T ss_pred HHc--CCCEEE-------ECccccHHHHHHHHHHHHHcCCEEec-----cc-cC---CCHHHHHHHHHcCCeEEEEEEcc
Confidence 532 333443 49999999999999999999986653 23 22 12233345666666666655443
Q ss_pred c
Q 012238 304 K 304 (467)
Q Consensus 304 K 304 (467)
.
T Consensus 144 ~ 144 (222)
T TIGR00289 144 M 144 (222)
T ss_pred C
Confidence 3
No 445
>PRK09189 uroporphyrinogen-III synthase; Validated
Probab=38.34 E-value=2.5e+02 Score=25.77 Aligned_cols=67 Identities=15% Similarity=0.064 Sum_probs=41.5
Q ss_pred HHHHhCCCCEEEEcCCCC--cchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCC
Q 012238 170 LIERYFPGAKVLISSPTW--GNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCA 238 (467)
Q Consensus 170 ~l~~~~~gd~Vlv~~P~y--~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p 238 (467)
+.....+|.+|+++...- ....+.++..|+.+..+.+|....-..+.+.+.+.+.+ .+...+++.+|
T Consensus 111 ~~~~~~~~~~vL~~rg~~~r~~l~~~L~~~G~~v~~~~vY~~~~~~~~~~~~~~~l~~--~~~d~i~f~S~ 179 (240)
T PRK09189 111 VAAALAPTARLLYLAGRPRAPVFEDRLAAAGIPFRVAECYDMLPVMYSPATLSAILGG--APFDAVLLYSR 179 (240)
T ss_pred HHHhcCCCCcEEEeccCcccchhHHHHHhCCCeeEEEEEEEeecCCCChHHHHHHHhc--CCCCEEEEeCH
Confidence 333335788999887543 34667788899999998877433223455666666664 23345554444
No 446
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=38.31 E-value=3.7e+02 Score=25.86 Aligned_cols=104 Identities=19% Similarity=0.110 Sum_probs=53.2
Q ss_pred ccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCC---CCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHH
Q 012238 146 VLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSP---TWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIAD 222 (467)
Q Consensus 146 ~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P---~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~ 222 (467)
++.-+-+++ |.||.+-=.++ .+.....|.++++-+- +...+.+.++..| ++..+-++-. ..-++..+.+.
T Consensus 35 ~v~g~~vLI--TGgg~GlGr~i--alefa~rg~~~vl~Din~~~~~etv~~~~~~g-~~~~y~cdis--~~eei~~~a~~ 107 (300)
T KOG1201|consen 35 SVSGEIVLI--TGGGSGLGRLI--ALEFAKRGAKLVLWDINKQGNEETVKEIRKIG-EAKAYTCDIS--DREEIYRLAKK 107 (300)
T ss_pred hccCCEEEE--eCCCchHHHHH--HHHHHHhCCeEEEEeccccchHHHHHHHHhcC-ceeEEEecCC--CHHHHHHHHHH
Confidence 344455666 77777655554 3445567776655442 2233444555556 6666655311 12244455555
Q ss_pred HHcCCCCcEEEEeCCCC---CCCCCCCCHHHHHHHHHH
Q 012238 223 IKAAPGGSFILLHGCAH---NPTGIDPTPEQWEKIADV 257 (467)
Q Consensus 223 l~~~~~~~~~i~i~~p~---NPTG~~~~~~~l~~l~~~ 257 (467)
+++.-....+++ ||.. .-.....+.+++++..++
T Consensus 108 Vk~e~G~V~ILV-NNAGI~~~~~ll~~~d~ei~k~~~v 144 (300)
T KOG1201|consen 108 VKKEVGDVDILV-NNAGIVTGKKLLDCSDEEIQKTFDV 144 (300)
T ss_pred HHHhcCCceEEE-eccccccCCCccCCCHHHHHHHHHH
Confidence 554433444444 5431 222345677777776554
No 447
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=38.03 E-value=1.3e+02 Score=24.93 Aligned_cols=59 Identities=3% Similarity=-0.050 Sum_probs=38.1
Q ss_pred HHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcC
Q 012238 191 KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKN 262 (467)
Q Consensus 191 ~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~ 262 (467)
...++..|++++....+ .+++++.++..+ .+..++.+|+-.-. ..+...++++.+++.+
T Consensus 23 ~~~l~~~GfeVi~lg~~------~s~e~~v~aa~e--~~adii~iSsl~~~-----~~~~~~~~~~~L~~~g 81 (132)
T TIGR00640 23 ATAYADLGFDVDVGPLF------QTPEEIARQAVE--ADVHVVGVSSLAGG-----HLTLVPALRKELDKLG 81 (132)
T ss_pred HHHHHhCCcEEEECCCC------CCHHHHHHHHHH--cCCCEEEEcCchhh-----hHHHHHHHHHHHHhcC
Confidence 34667889888876542 455666555554 46667777654411 2566888888888864
No 448
>TIGR00064 ftsY signal recognition particle-docking protein FtsY. There is a weak division between FtsY and SRP54; both are GTPases. In E.coli, ftsY is an essential gene located in an operon with cell division genes ftsE and ftsX, but its apparent function is as the signal recognition particle docking protein.
Probab=37.74 E-value=3.5e+02 Score=25.58 Aligned_cols=40 Identities=15% Similarity=0.221 Sum_probs=22.9
Q ss_pred cEEEEeCCCCCCCCCCCCHHHHHHHHHHHH------hcCCeeEEecc
Q 012238 230 SFILLHGCAHNPTGIDPTPEQWEKIADVIQ------EKNHIPFFDVA 270 (467)
Q Consensus 230 ~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~------~~~~~li~Dea 270 (467)
..+++-+.+.+++ -..-.+|++++.+.+. ..+++++.|..
T Consensus 156 D~ViIDT~G~~~~-d~~~~~el~~~~~~~~~~~~~~~~~~~LVl~a~ 201 (272)
T TIGR00064 156 DVVLIDTAGRLQN-KVNLMDELKKIKRVIKKVDKDAPDEVLLVLDAT 201 (272)
T ss_pred CEEEEeCCCCCcc-hHHHHHHHHHHHHHHhcccCCCCceEEEEEECC
Confidence 3455544444443 1122346677777776 56788888875
No 449
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=37.61 E-value=4.5e+02 Score=26.62 Aligned_cols=123 Identities=12% Similarity=0.031 Sum_probs=71.0
Q ss_pred HHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHH--hCCCCEEEEcCCCCcchHHHHhhCC--CCeEEe
Q 012238 129 AAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER--YFPGAKVLISSPTWGNHKNIFNDAR--VPWSEY 204 (467)
Q Consensus 129 ~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~--~~~gd~Vlv~~P~y~~~~~~~~~~G--~~~~~v 204 (467)
++.|+.+.+.+.-.....-.+...+.+++.+.-|.+.+.-.+-.. -.|+-.|++..-+-.+.....+.+| +.+.++
T Consensus 28 ~~y~~r~~eRfg~~~~~~~~~~p~vWiHaaSVGEv~a~~pLv~~l~~~~P~~~ilvTt~T~Tg~e~a~~~~~~~v~h~Yl 107 (419)
T COG1519 28 PKYRKRLGERFGFYKPPVKPEGPLVWIHAASVGEVLAALPLVRALRERFPDLRILVTTMTPTGAERAAALFGDSVIHQYL 107 (419)
T ss_pred hHHHHHHHHHhcccCCCCCCCCCeEEEEecchhHHHHHHHHHHHHHHhCCCCCEEEEecCccHHHHHHHHcCCCeEEEec
Confidence 456777777754222222223456665566665655544222112 2377788888877777777777777 466667
Q ss_pred eeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEecc
Q 012238 205 RYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVA 270 (467)
Q Consensus 205 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Dea 270 (467)
|+| .+-.+.+.++...++..+++ .-|-|--++.-|+++|+.++.=.+
T Consensus 108 P~D-------~~~~v~rFl~~~~P~l~Ii~------------EtElWPnli~e~~~~~~p~~LvNa 154 (419)
T COG1519 108 PLD-------LPIAVRRFLRKWRPKLLIIM------------ETELWPNLINELKRRGIPLVLVNA 154 (419)
T ss_pred CcC-------chHHHHHHHHhcCCCEEEEE------------eccccHHHHHHHHHcCCCEEEEee
Confidence 773 22344444544324433332 235577788889889988776555
No 450
>TIGR03573 WbuX N-acetyl sugar amidotransferase. This enzyme has been implicated in the formation of the acetamido moiety (sugar-NC(=NH)CH3) which is found on some exopolysaccharides and is positively charged at neutral pH. The reaction involves ligation of ammonia with a sugar N-acetyl group, displacing water. In E. coli (O145 strain) and Pseudomonas aeruginosa (O12 strain) this gene is known as wbuX and ifnA respectively and likely acts on sialic acid. In Campylobacter jejuni, the gene is known as pseA and acts on pseudaminic acid in the process of flagellin glycosylation. In other Pseudomonas strains and various organisms it is unclear what the identity of the sugar substrate is, and in fact, the phylogenetic tree of this family sports a considerably deep branching suggestive of possible major differences in substrate structure. Nevertheless, the family is characterized by a conserved tetracysteine motif (CxxC.....[GN]xCxxC) possibly indicative of a metal binding site, as well as an
Probab=36.52 E-value=4.3e+02 Score=26.01 Aligned_cols=121 Identities=12% Similarity=0.076 Sum_probs=64.7
Q ss_pred cchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEE--EEcCCCCc------chHHHHhhC
Q 012238 126 EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKV--LISSPTWG------NHKNIFNDA 197 (467)
Q Consensus 126 ~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~V--lv~~P~y~------~~~~~~~~~ 197 (467)
.+..+|++.+.++ ....+.. .+-++. .+||..+..++..+...+ |.++ +..++.|. +....++.+
T Consensus 40 ~~~~~l~~l~~~~-k~~~~~~--yD~iV~--lSGGkDSs~la~ll~~~~--gl~~l~vt~~~~~~~e~~~~n~~~~~~~l 112 (343)
T TIGR03573 40 EREKELEELVDKI-KKKGGGR--YDCIIG--VSGGKDSTYQAHVLKKKL--GLNPLLVTVDPGWNTELGVKNLNNLIKKL 112 (343)
T ss_pred HHHHHHHHHHHHH-HhcCCCC--CCEEEE--CCCCHHHHHHHHHHHHHh--CCceEEEEECCCCCCHHHHHHHHHHHHHc
Confidence 3455666655554 3322110 222333 789988888863332222 4433 35566664 344566678
Q ss_pred CCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEecc
Q 012238 198 RVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVA 270 (467)
Q Consensus 198 G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Dea 270 (467)
|++...+.. |++.+.+..... + -+..+|...+. ......+.++|+++|+.+|+..-
T Consensus 113 gvd~~~i~~--------d~~~~~~l~~~~-----~---~~~~~pc~~c~-~~~~~~l~~~A~~~gi~~Il~G~ 168 (343)
T TIGR03573 113 GFDLHTITI--------NPETFRKLQRAY-----F---KKVGDPEWPQD-HAIFASVYQVALKFNIPLIIWGE 168 (343)
T ss_pred CCCeEEEeC--------CHHHHHHHHHHH-----H---hccCCCchhhh-hHHHHHHHHHHHHhCCCEEEeCC
Confidence 888877654 445554433310 0 02223332222 33456788899999998887644
No 451
>PRK05703 flhF flagellar biosynthesis regulator FlhF; Validated
Probab=36.42 E-value=4e+02 Score=27.15 Aligned_cols=130 Identities=16% Similarity=0.195 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHh---CCCCEEEEcC-CCCc-c----hHHHHhhCCC
Q 012238 129 AAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY---FPGAKVLISS-PTWG-N----HKNIFNDARV 199 (467)
Q Consensus 129 ~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~---~~gd~Vlv~~-P~y~-~----~~~~~~~~G~ 199 (467)
..+++.+++.+.......+....++++...+|.|=-.+++.+...+ ..|.+|.+.+ -.|. . .....+..|+
T Consensus 200 ~~~~~~L~~~l~~~~~~~~~~~~~i~~vGptGvGKTTt~~kLA~~~~~~~~g~~V~li~~D~~r~~a~eqL~~~a~~~~v 279 (424)
T PRK05703 200 RYLLELLANMIPVRVEDILKQGGVVALVGPTGVGKTTTLAKLAARYALLYGKKKVALITLDTYRIGAVEQLKTYAKIMGI 279 (424)
T ss_pred HHHHHHHHHHhCccccccccCCcEEEEECCCCCCHHHHHHHHHHHHHHhcCCCeEEEEECCccHHHHHHHHHHHHHHhCC
Confidence 3455666666543321112233455544666655444443333322 3456665544 2332 1 1222334554
Q ss_pred CeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHH----hcCCeeEEeccC
Q 012238 200 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQ----EKNHIPFFDVAY 271 (467)
Q Consensus 200 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~----~~~~~li~Deay 271 (467)
.+... .+.+++.+.+..... ..+|++-.|... ..+...+.++.++.. ....+++.+..+
T Consensus 280 p~~~~---------~~~~~l~~~l~~~~~-~DlVlIDt~G~~---~~d~~~~~~L~~ll~~~~~~~~~~LVl~a~~ 342 (424)
T PRK05703 280 PVEVV---------YDPKELAKALEQLRD-CDVILIDTAGRS---QRDKRLIEELKALIEFSGEPIDVYLVLSATT 342 (424)
T ss_pred ceEcc---------CCHHhHHHHHHHhCC-CCEEEEeCCCCC---CCCHHHHHHHHHHHhccCCCCeEEEEEECCC
Confidence 33221 234556666654333 345555554322 233444555555554 224567777653
No 452
>PRK04296 thymidine kinase; Provisional
Probab=36.32 E-value=3e+02 Score=24.26 Aligned_cols=112 Identities=12% Similarity=0.025 Sum_probs=60.5
Q ss_pred CCCCEEEEcCCCCcc---hHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHH
Q 012238 175 FPGAKVLISSPTWGN---HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQW 251 (467)
Q Consensus 175 ~~gd~Vlv~~P~y~~---~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l 251 (467)
..|.+|++..|.+.. ...++...|.++..+.. ...+++.+.+.+...+..+|++--.+ .++.+++
T Consensus 28 ~~g~~v~i~k~~~d~~~~~~~i~~~lg~~~~~~~~-------~~~~~~~~~~~~~~~~~dvviIDEaq-----~l~~~~v 95 (190)
T PRK04296 28 ERGMKVLVFKPAIDDRYGEGKVVSRIGLSREAIPV-------SSDTDIFELIEEEGEKIDCVLIDEAQ-----FLDKEQV 95 (190)
T ss_pred HcCCeEEEEeccccccccCCcEecCCCCcccceEe-------CChHHHHHHHHhhCCCCCEEEEEccc-----cCCHHHH
Confidence 468899888775432 23344555654433222 22334444443211344566666554 3667778
Q ss_pred HHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecC
Q 012238 252 EKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSY 302 (467)
Q Consensus 252 ~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~ 302 (467)
.++++.++..|+.+|+=.-..+|.-. .......+....+.++.+...
T Consensus 96 ~~l~~~l~~~g~~vi~tgl~~~~~~~----~f~~~~~L~~~aD~V~~l~~v 142 (190)
T PRK04296 96 VQLAEVLDDLGIPVICYGLDTDFRGE----PFEGSPYLLALADKVTELKAI 142 (190)
T ss_pred HHHHHHHHHcCCeEEEEecCcccccC----cCchHHHHHHhcCeEEEeeEE
Confidence 89999988899888875443343221 111223444455666655543
No 453
>TIGR02026 BchE magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase. This model respresents the cobalamin-dependent oxidative cyclase responsible for forming the distinctive E-ring of the chlorin ring system under anaerobic conditions. This step is essential in the biosynthesis of both bacteriochlorophyll and chlorophyll under anaerobic conditions (a separate enzyme, AcsF, acts under aerobic conditions). This model identifies two clades of sequences, one from photosynthetic, non-cyanobacterial bacteria and another including Synechocystis and several non-photosynthetic bacteria. The function of the Synechocystis gene is supported by gene clustering with other photosynthetic genes, so the purpose of the gene in the non-photosynthetic bacteria is uncertain. Note that homologs of this gene are not found in plants which rely solely on the aerobic cyclase.
Probab=35.97 E-value=1.9e+02 Score=30.16 Aligned_cols=68 Identities=18% Similarity=0.059 Sum_probs=42.9
Q ss_pred HHhhCC-CCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhc--CCeeEEec
Q 012238 193 IFNDAR-VPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEK--NHIPFFDV 269 (467)
Q Consensus 193 ~~~~~G-~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~--~~~li~De 269 (467)
.++..| .++..++.. ...++.+.+.+.+.+. ++.+|.++. .........++++.+|+. ++.+|+=.
T Consensus 31 ~L~~~G~~~V~iiD~~---~~~~~~~~~~~~l~~~--~pdvVgis~------~t~~~~~a~~~~~~~k~~~P~~~iV~GG 99 (497)
T TIGR02026 31 ALLDAGYHDVTFLDAM---TGPLTDEKLVERLRAH--CPDLVLITA------ITPAIYIACETLKFARERLPNAIIVLGG 99 (497)
T ss_pred HHHhcCCcceEEeccc---ccCCCHHHHHHHHHhc--CcCEEEEec------CcccHHHHHHHHHHHHHHCCCCEEEEcC
Confidence 456778 577777653 3346778888877753 344555542 223456677888888876 78888755
Q ss_pred cC
Q 012238 270 AY 271 (467)
Q Consensus 270 ay 271 (467)
.+
T Consensus 100 ~h 101 (497)
T TIGR02026 100 IH 101 (497)
T ss_pred CC
Confidence 43
No 454
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=35.42 E-value=3.3e+02 Score=24.34 Aligned_cols=72 Identities=11% Similarity=0.120 Sum_probs=47.6
Q ss_pred CEEEEcCCCCc-------chHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHH
Q 012238 178 AKVLISSPTWG-------NHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQ 250 (467)
Q Consensus 178 d~Vlv~~P~y~-------~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~ 250 (467)
.+|++..+.=. ....+++..|++++.+-. ...++.+.+.+.+ .++.++.++.-..++ ...
T Consensus 85 ~~vv~~t~~gd~H~lG~~~v~~~l~~~G~~vi~LG~------~vp~e~~v~~~~~--~~pd~v~lS~~~~~~-----~~~ 151 (197)
T TIGR02370 85 GKVVCGVAEGDVHDIGKNIVVTMLRANGFDVIDLGR------DVPIDTVVEKVKK--EKPLMLTGSALMTTT-----MYG 151 (197)
T ss_pred CeEEEEeCCCchhHHHHHHHHHHHHhCCcEEEECCC------CCCHHHHHHHHHH--cCCCEEEEccccccC-----HHH
Confidence 36666554322 234567889999988744 2677888888886 455566665544333 667
Q ss_pred HHHHHHHHHhcC
Q 012238 251 WEKIADVIQEKN 262 (467)
Q Consensus 251 l~~l~~~~~~~~ 262 (467)
++++++.+++.+
T Consensus 152 ~~~~i~~l~~~~ 163 (197)
T TIGR02370 152 QKDINDKLKEEG 163 (197)
T ss_pred HHHHHHHHHHcC
Confidence 888888888874
No 455
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=35.14 E-value=4.8e+02 Score=26.23 Aligned_cols=133 Identities=9% Similarity=0.079 Sum_probs=76.1
Q ss_pred CCcCCCCcchHHHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCC
Q 012238 119 NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDAR 198 (467)
Q Consensus 119 ~~~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G 198 (467)
++.|......++++++..+.+.. +|......+. ..|.+....-+..-++.+..-+..++..-+|.....++...-
T Consensus 46 SNdYLGLa~~~~~~~a~~~~~~~-~g~g~~gsR~----i~G~~~~h~~LE~~lA~f~g~e~al~f~SGy~AN~~~i~~l~ 120 (388)
T COG0156 46 SNDYLGLASHPELIEAAKAAIRR-YGVGAGGSRL----ISGTSDLHVELEEELADFLGAEAALLFSSGFVANLGLLSALL 120 (388)
T ss_pred ccCcccccCCHHHHHHHHHHHHH-hCCCCCCcCc----ccCCcHHHHHHHHHHHHHhCCCcEEEEcccchhHHHHHHHhc
Confidence 36788878888888888777543 3433333343 244444333333345555544578888889976666555432
Q ss_pred C--CeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhc---CCeeEEeccCCC
Q 012238 199 V--PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEK---NHIPFFDVAYQG 273 (467)
Q Consensus 199 ~--~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~---~~~li~Deay~~ 273 (467)
- .++..+ + ++-.-+.+-++- .+...+... || +.+.++++.+-+++. ..+|++|.+|+-
T Consensus 121 ~~~dli~~D---~----lnHASiidG~rl--s~a~~~~f~--Hn------D~~~Le~~l~~~~~~~~~~~~IvtegVfSM 183 (388)
T COG0156 121 KKGDLIFSD---E----LNHASIIDGIRL--SRAEVRRFK--HN------DLDHLEALLEEARENGARRKLIVTEGVFSM 183 (388)
T ss_pred CCCcEEEEe---c----hhhhhHHHHHHh--CCCcEEEec--CC------CHHHHHHHHHhhhccCCCceEEEEeccccC
Confidence 2 233222 1 333344454543 344444433 42 357788887766544 389999999764
No 456
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=34.61 E-value=3.9e+02 Score=24.95 Aligned_cols=149 Identities=14% Similarity=0.104 Sum_probs=83.4
Q ss_pred ceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCC-CCeEEeeeecCCCCCCChhhHHHHHHc---C
Q 012238 151 RVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDAR-VPWSEYRYYDPKTVGLDFEGMIADIKA---A 226 (467)
Q Consensus 151 ~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G-~~~~~v~~~~~~~~~~d~~~l~~~l~~---~ 226 (467)
.+++ ..|++.++-.+. ...+...|-+|+...=--.....+....+ .++..+.++ .-|.+.+++.++. .
T Consensus 7 kv~l--ITGASSGiG~A~-A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~D-----VtD~~~~~~~i~~~~~~ 78 (246)
T COG4221 7 KVAL--ITGASSGIGEAT-ARALAEAGAKVVLAARREERLEALADEIGAGAALALALD-----VTDRAAVEAAIEALPEE 78 (246)
T ss_pred cEEE--EecCcchHHHHH-HHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeec-----cCCHHHHHHHHHHHHHh
Confidence 4555 577777777651 12234478888887766666666666676 344444442 1355554444432 1
Q ss_pred CCCcEEEEeCCCCCCCCC--CCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhc-CCeEEEEecCc
Q 012238 227 PGGSFILLHGCAHNPTGI--DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR-GMELLVAQSYS 303 (467)
Q Consensus 227 ~~~~~~i~i~~p~NPTG~--~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~S~S 303 (467)
-.+..+++.+-..-+-+- -...++|+..++.--+ |+ .+. -...++.+.+. ..++|.++|..
T Consensus 79 ~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~-G~-----------l~~----~~avLP~m~~r~~G~IiN~~SiA 142 (246)
T COG4221 79 FGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVK-GL-----------LNG----TRAVLPGMVERKSGHIINLGSIA 142 (246)
T ss_pred hCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHH-HH-----------HHH----HHHhhhHHHhcCCceEEEecccc
Confidence 234567774444444322 2356777777664432 11 111 01123334443 34899999998
Q ss_pred cCcccCCCccceEEEecCCHHHHhh
Q 012238 304 KNLGLYAERIGAMNVVCSSSDLAAR 328 (467)
Q Consensus 304 K~~~~~G~RiG~~~~v~~~~~~~~~ 328 (467)
-.+..|| |.++ ++.+..+..
T Consensus 143 G~~~y~~---~~vY--~ATK~aV~~ 162 (246)
T COG4221 143 GRYPYPG---GAVY--GATKAAVRA 162 (246)
T ss_pred ccccCCC---Cccc--hhhHHHHHH
Confidence 8887776 6665 788877776
No 457
>PLN03244 alpha-amylase; Provisional
Probab=34.26 E-value=70 Score=35.10 Aligned_cols=42 Identities=14% Similarity=0.207 Sum_probs=34.9
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCC
Q 012238 236 GCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASG 277 (467)
Q Consensus 236 ~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~ 277 (467)
++.--|+...-++++++++++.|.+.|+-||.|-+|.++..+
T Consensus 428 t~fFApssRYGTPeDLK~LVD~aH~~GI~VILDvV~NH~~~d 469 (872)
T PLN03244 428 TNFFAASSRYGTPDDFKRLVDEAHGLGLLVFLDIVHSYAAAD 469 (872)
T ss_pred CcccccCcccCCHHHHHHHHHHHHHCCCEEEEEecCccCCCc
Confidence 344556666667999999999999999999999999888754
No 458
>TIGR02104 pulA_typeI pullulanase, type I. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family consists of pullulanases related to the subfamilies described in TIGR02102 and TIGR02103 but having a different domain architecture with shorter sequences. Members are called type I pullulanases.
Probab=34.21 E-value=49 Score=35.47 Aligned_cols=36 Identities=14% Similarity=0.238 Sum_probs=29.3
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCC
Q 012238 237 CAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFA 275 (467)
Q Consensus 237 ~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~ 275 (467)
+|+.|++ ..++++++++.|+++|+-||.|-+|-+..
T Consensus 220 ~p~~~~~---~~~efk~lV~~~H~~Gi~VilDvV~NH~~ 255 (605)
T TIGR02104 220 NPYDPAT---RIRELKQMIQALHENGIRVIMDVVYNHTY 255 (605)
T ss_pred CCCccch---HHHHHHHHHHHHHHCCCEEEEEEEcCCcc
Confidence 3444543 36899999999999999999999987764
No 459
>TIGR02083 LEU2 3-isopropylmalate dehydratase, large subunit. This model along with TIGR00170 describe clades which consist only of LeuC sequences. Here, the genes from Pyrococcus furiosus, Clostridium acetobutylicum, Thermotoga maritima and others are gene clustered with related genes from the leucine biosynthesis pathway.
Probab=34.08 E-value=1.5e+02 Score=30.05 Aligned_cols=74 Identities=18% Similarity=0.183 Sum_probs=45.7
Q ss_pred EEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccC
Q 012238 231 FILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY 309 (467)
Q Consensus 231 ~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~ 309 (467)
+++++...+-|+...-..+....+.++++++|+..+.|.--+++...-. .-.-++..++-++-..|.+-++|.-
T Consensus 57 ~v~~~~DH~vpa~~~~~a~~~~~~r~fa~~~gi~~f~d~g~~GI~H~v~-----~E~g~~~PG~~ivg~DSHT~t~Ga~ 130 (419)
T TIGR02083 57 RVALVPDHFTPNKDIKSAEQCKMMREFAREQGIEKFFEIGNMGIEHALL-----PEEGIVKPGDLIIGADSHTCTYGAL 130 (419)
T ss_pred CEEEEeCCCCCCCCHHHHHHHHHHHHHHHHcCCcceecCCCcceeeeec-----cccCccCCCeEEEecCCCccccCcc
Confidence 4555566677887766677788899999999987666653223332100 0001234455666677888777743
No 460
>PRK06483 dihydromonapterin reductase; Provisional
Probab=33.71 E-value=3.3e+02 Score=24.49 Aligned_cols=90 Identities=14% Similarity=0.123 Sum_probs=40.1
Q ss_pred CCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHc---CCCCcEEEE
Q 012238 158 LSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKA---APGGSFILL 234 (467)
Q Consensus 158 ~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~---~~~~~~~i~ 234 (467)
.|+++++-... ...+...|.+|++..-.-......++..|+..+..++ -|.+.+++.+++ ...+..+++
T Consensus 8 tGas~gIG~~i-a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~-------~~~~~~~~~~~~~~~~~~~id~lv 79 (236)
T PRK06483 8 TGAGQRIGLAL-AWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQCIQADF-------STNAGIMAFIDELKQHTDGLRAII 79 (236)
T ss_pred ECCCChHHHHH-HHHHHHCCCeEEEEeCCchhHHHHHHHcCCEEEEcCC-------CCHHHHHHHHHHHHhhCCCccEEE
Confidence 55555555541 1223447888877653332233344445544333333 244444444433 112345666
Q ss_pred eCCCCCCCC--CCCCHHHHHHHH
Q 012238 235 HGCAHNPTG--IDPTPEQWEKIA 255 (467)
Q Consensus 235 i~~p~NPTG--~~~~~~~l~~l~ 255 (467)
++....+.+ ...+.+++++..
T Consensus 80 ~~ag~~~~~~~~~~~~~~~~~~~ 102 (236)
T PRK06483 80 HNASDWLAEKPGAPLADVLARMM 102 (236)
T ss_pred ECCccccCCCcCccCHHHHHHHH
Confidence 443322122 123455565554
No 461
>PRK05234 mgsA methylglyoxal synthase; Validated
Probab=33.64 E-value=2.2e+02 Score=24.01 Aligned_cols=71 Identities=14% Similarity=0.088 Sum_probs=39.3
Q ss_pred HHHHhhC-CCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEec
Q 012238 191 KNIFNDA-RVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDV 269 (467)
Q Consensus 191 ~~~~~~~-G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~De 269 (467)
...++.. |+++..+ ..++.++ + ..+.+.+.. +..-++++.| .|+|......+-..|.+.|.++|+.++..-
T Consensus 42 a~~L~~~~Gi~v~~v-i~~~~gg--~-~~i~~~I~~---g~i~lVInt~-dp~~~~~~~~D~~~IRR~Av~~~IP~~T~l 113 (142)
T PRK05234 42 GGLIQEATGLDVTRL-LSGPLGG--D-QQIGALIAE---GKIDMLIFFR-DPLTAQPHDPDVKALLRLADVWNIPVATNR 113 (142)
T ss_pred HHHHHhccCCeeEEE-EcCCCCC--c-hhHHHHHHc---CceeEEEEec-CCCCCCcccchHHHHHHHHHHcCCCEEcCH
Confidence 3445556 8877766 3222212 2 345566663 3344444444 123443324456688888999999888653
No 462
>cd01422 MGS Methylglyoxal synthase catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The first part of the catalytic mechanism is believed to be similar to TIM (triosephosphate isomerase) in that both enzymes utilize DHAP to form an ene-diolate phosphate intermediate. In MGS, the second catalytic step is characterized by the elimination of phosphate and collapse of the enediolate to form methylglyoxal instead of reprotonation to form the isomer glyceraldehyde 3-phosphate, as in TIM. This is the first reaction in the methylglyoxal bypass of the Embden-Myerhoff glycolytic pathway and is believed to provide physiological benefits under non-ideal growth conditions in bacteria.
Probab=33.53 E-value=2.5e+02 Score=22.62 Aligned_cols=67 Identities=12% Similarity=0.054 Sum_probs=37.7
Q ss_pred HHhh-CCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEE
Q 012238 193 IFND-ARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFF 267 (467)
Q Consensus 193 ~~~~-~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~ 267 (467)
.++. .|..+..++.. +.++ + ..+.+.+.. +..-++++.| +|-|......+-..|.+.|.+++++++.
T Consensus 39 ~L~~~~Gi~v~~vk~~-~~~g--~-~~i~~~i~~---g~i~~VInt~-~~~~~~~~~~dg~~iRr~a~~~~Ip~~T 106 (115)
T cd01422 39 LIQEATGLTVNRMKSG-PLGG--D-QQIGALIAE---GEIDAVIFFR-DPLTAQPHEPDVKALLRLCDVYNIPLAT 106 (115)
T ss_pred HHHHhhCCcEEEEecC-CCCc--h-hHHHHHHHc---CceeEEEEcC-CCCCCCcccccHHHHHHHHHHcCCCEEE
Confidence 3444 68887777431 1112 2 446666663 3344444444 2324433244567888889999998774
No 463
>cd06449 ACCD Aminocyclopropane-1-carboxylate deaminase (ACCD): Pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of 1-aminocyclopropane-L-carboxylate (ACC), a precursor of the plant hormone ethylene, to alpha-ketobutyrate and ammonia.
Probab=33.13 E-value=2.1e+02 Score=27.50 Aligned_cols=17 Identities=0% Similarity=-0.365 Sum_probs=13.3
Q ss_pred hHHHHhhCCCCeEEeee
Q 012238 190 HKNIFNDARVPWSEYRY 206 (467)
Q Consensus 190 ~~~~~~~~G~~~~~v~~ 206 (467)
-...++.+|++++.++-
T Consensus 100 ~~~~~~~~Ga~v~~~~~ 116 (307)
T cd06449 100 NILLSRIMGADVRLVSA 116 (307)
T ss_pred cHHHHHHCCCEEEEECC
Confidence 45667899999988864
No 464
>PRK06500 short chain dehydrogenase; Provisional
Probab=33.10 E-value=3.4e+02 Score=24.51 Aligned_cols=48 Identities=17% Similarity=0.077 Sum_probs=25.0
Q ss_pred CCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeee
Q 012238 158 LSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRY 206 (467)
Q Consensus 158 ~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~ 206 (467)
.|+++++-... .......|.+|++..-.-.......+..|.++..+..
T Consensus 12 tGasg~iG~~l-a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~ 59 (249)
T PRK06500 12 TGGTSGIGLET-ARQFLAEGARVAITGRDPASLEAARAELGESALVIRA 59 (249)
T ss_pred eCCCchHHHHH-HHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEe
Confidence 66666665541 1223447877776654322233344445666666655
No 465
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]
Probab=33.00 E-value=2.1e+02 Score=26.23 Aligned_cols=71 Identities=13% Similarity=0.070 Sum_probs=48.8
Q ss_pred hHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCC---CCCCCCHHHHHHHHHHHHhcCCeeE
Q 012238 190 HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP---TGIDPTPEQWEKIADVIQEKNHIPF 266 (467)
Q Consensus 190 ~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NP---TG~~~~~~~l~~l~~~~~~~~~~li 266 (467)
...+++.+|+++.. | -|+.|++++.+.+-...=+..++-+...-=+ -|..++.+.++++..+.++||+.+.
T Consensus 104 ve~lc~~lGl~~~~-P-----LWg~d~~ell~e~~~~Gf~~~Iv~Vsa~gL~~~~lGr~i~~~~~e~l~~l~~~ygi~~~ 177 (223)
T COG2102 104 VERLCEELGLKVYA-P-----LWGRDPEELLEEMVEAGFEAIIVAVSAEGLDESWLGRRIDREFLEELKSLNRRYGIHPA 177 (223)
T ss_pred HHHHHHHhCCEEee-c-----ccCCCHHHHHHHHHHcCCeEEEEEEeccCCChHHhCCccCHHHHHHHHHHHHhcCCCcc
Confidence 34677888876543 3 3678888888777653233344444444334 5889999999999999999997543
No 466
>PRK08265 short chain dehydrogenase; Provisional
Probab=32.97 E-value=3.3e+02 Score=25.13 Aligned_cols=93 Identities=15% Similarity=0.057 Sum_probs=44.3
Q ss_pred CCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcC---CCCcEEEE
Q 012238 158 LSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA---PGGSFILL 234 (467)
Q Consensus 158 ~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~---~~~~~~i~ 234 (467)
.|+++++-... .......|.+|++..-.-.......+..+.++..+..+- -|.+.+++.++.. -.+..+++
T Consensus 12 tGas~gIG~~i-a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl-----~~~~~~~~~~~~~~~~~g~id~lv 85 (261)
T PRK08265 12 TGGATLIGAAV-ARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDI-----TDDAAIERAVATVVARFGRVDILV 85 (261)
T ss_pred ECCCChHHHHH-HHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecC-----CCHHHHHHHHHHHHHHhCCCCEEE
Confidence 56666665541 122345788888765432223334444455555555521 2445555544321 12344555
Q ss_pred eCCCC-CCCCCCCCHHHHHHHHH
Q 012238 235 HGCAH-NPTGIDPTPEQWEKIAD 256 (467)
Q Consensus 235 i~~p~-NPTG~~~~~~~l~~l~~ 256 (467)
++... .+.+...+.+++++..+
T Consensus 86 ~~ag~~~~~~~~~~~~~~~~~~~ 108 (261)
T PRK08265 86 NLACTYLDDGLASSRADWLAALD 108 (261)
T ss_pred ECCCCCCCCcCcCCHHHHHHHHh
Confidence 44332 22233445666666543
No 467
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=32.96 E-value=3e+02 Score=24.22 Aligned_cols=107 Identities=18% Similarity=0.102 Sum_probs=49.8
Q ss_pred CcccccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhh----CCCCeEEeeeecCCCCCCChhhH
Q 012238 144 NSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFND----ARVPWSEYRYYDPKTVGLDFEGM 219 (467)
Q Consensus 144 ~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~----~G~~~~~v~~~~~~~~~~d~~~l 219 (467)
+.++...++++ .|+++.+-... .......|.+|.+.+..........+. .+..+...+. .|.+.+
T Consensus 23 ~~~l~~~~vlV---lGgtG~iG~~~-a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~-------~~~~~~ 91 (194)
T cd01078 23 GKDLKGKTAVV---LGGTGPVGQRA-AVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVET-------SDDAAR 91 (194)
T ss_pred CcCCCCCEEEE---ECCCCHHHHHH-HHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeC-------CCHHHH
Confidence 34444556766 44444433220 112234666777776554333333322 2344333322 466777
Q ss_pred HHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCC
Q 012238 220 IADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGF 274 (467)
Q Consensus 220 ~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~ 274 (467)
.+.+.+ ..+++.+ .|.|.... . +.+... ....+++|.+|-.-
T Consensus 92 ~~~~~~----~diVi~a---t~~g~~~~-~----~~~~~~-~~~~vv~D~~~~~~ 133 (194)
T cd01078 92 AAAIKG----ADVVFAA---GAAGVELL-E----KLAWAP-KPLAVAADVNAVPP 133 (194)
T ss_pred HHHHhc----CCEEEEC---CCCCceec-h----hhhccc-CceeEEEEccCCCC
Confidence 777753 3355543 34455311 1 111111 12568999887543
No 468
>PRK04147 N-acetylneuraminate lyase; Provisional
Probab=32.93 E-value=2.4e+02 Score=26.97 Aligned_cols=106 Identities=13% Similarity=0.145 Sum_probs=0.0
Q ss_pred hHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHc---CCCCcEEEEeCCCCCC--CCCCCCHHHHHHHHHHHHhcCCe
Q 012238 190 HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKA---APGGSFILLHGCAHNP--TGIDPTPEQWEKIADVIQEKNHI 264 (467)
Q Consensus 190 ~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~---~~~~~~~i~i~~p~NP--TG~~~~~~~l~~l~~~~~~~~~~ 264 (467)
....++..|+..+.+-. +.-+..+.+++.+.+++ ..+.+.+++ |+| ||..++.+.+.+| ++-.|+.
T Consensus 91 ~a~~a~~~Gad~v~v~~--P~y~~~~~~~l~~~f~~va~a~~lPv~iY----n~P~~tg~~l~~~~l~~L---~~~pnvv 161 (293)
T PRK04147 91 LAKYATELGYDAISAVT--PFYYPFSFEEICDYYREIIDSADNPMIVY----NIPALTGVNLSLDQFNEL---FTLPKVI 161 (293)
T ss_pred HHHHHHHcCCCEEEEeC--CcCCCCCHHHHHHHHHHHHHhCCCCEEEE----eCchhhccCCCHHHHHHH---hcCCCEE
Q ss_pred eEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCCCccce
Q 012238 265 PFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGA 315 (467)
Q Consensus 265 li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~ 315 (467)
-|=|.. .+...+..+.....+..++.+.--.+. .++..|+
T Consensus 162 giK~s~----------~d~~~~~~~~~~~~~~~v~~G~d~~~~-~~l~~G~ 201 (293)
T PRK04147 162 GVKQTA----------GDLYQLERIRKAFPDKLIYNGFDEMFA-SGLLAGA 201 (293)
T ss_pred EEEeCC----------CCHHHHHHHHHhCCCCEEEEeehHHHH-HHHHcCC
No 469
>TIGR00683 nanA N-acetylneuraminate lyase. N-acetylneuraminate lyase is also known as N-acetylneuraminic acid aldolase, sialic acid aldolase, or sialate lyase. It is an intracellular enzyme. The structure of this homotetrameric enzyme related to dihydrodipicolinate synthase is known. In Clostridium tertium, the enzyme appears to be in an operon with a secreted sialidase that releases sialic acid from host sialoglycoconjugates. In several E. coli strains, however, this enzyme is responsible for N-acetyl-D-neuraminic acid synthesis for capsule production by condensing N-acetyl-D-mannosamine and pyruvate.
Probab=32.87 E-value=2.8e+02 Score=26.50 Aligned_cols=28 Identities=18% Similarity=0.215 Sum_probs=19.6
Q ss_pred CCC--CCCCCCHHHHHHHHHHHHhcCCeeEEec
Q 012238 239 HNP--TGIDPTPEQWEKIADVIQEKNHIPFFDV 269 (467)
Q Consensus 239 ~NP--TG~~~~~~~l~~l~~~~~~~~~~li~De 269 (467)
||| ||..++.+.+.+|+ +..|+.-|=|.
T Consensus 135 n~P~~tg~~l~~~~i~~L~---~~pnv~giK~s 164 (290)
T TIGR00683 135 SIPFLTGVNMGIEQFGELY---KNPKVLGVKFT 164 (290)
T ss_pred eCccccccCcCHHHHHHHh---cCCCEEEEEeC
Confidence 455 79999999888874 33466666664
No 470
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=32.49 E-value=2.6e+02 Score=23.38 Aligned_cols=50 Identities=12% Similarity=0.082 Sum_probs=26.1
Q ss_pred hhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEe
Q 012238 216 FEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFD 268 (467)
Q Consensus 216 ~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~D 268 (467)
.+.+++.++..+++.++++++.+ .| ..+..+--+.+.++|+++.-..++|
T Consensus 66 ~~nl~~ii~~~~~~~~ivlv~~~-~~--~~~~~~~n~~~~~~a~~~~~v~~id 115 (150)
T cd01840 66 KDQLDELLDALGPDRQVYLVNPH-VP--RPWEPDVNAYLLDAAKKYKNVTIID 115 (150)
T ss_pred HHHHHHHHHHcCCCCEEEEEECC-CC--cchHHHHHHHHHHHHHHCCCcEEec
Confidence 35555555544344566665443 33 2333443455777788883344445
No 471
>PRK14723 flhF flagellar biosynthesis regulator FlhF; Provisional
Probab=32.32 E-value=7.3e+02 Score=27.54 Aligned_cols=132 Identities=16% Similarity=0.157 Sum_probs=61.6
Q ss_pred hHHHHHHHHHHHhCCCC--cccccCceeeeecCCchhHHHHHHHHHHHh--CCC-CEEEEcC-CCCc-chHH----HHhh
Q 012238 128 LAAFNKVTAELLFGADN--SVLKEQRVATVQGLSGTGSLRLAAALIERY--FPG-AKVLISS-PTWG-NHKN----IFND 196 (467)
Q Consensus 128 ~~~lr~aia~~l~~~~~--~~~~~~~i~~~~t~ggt~al~l~~~~l~~~--~~g-d~Vlv~~-P~y~-~~~~----~~~~ 196 (467)
..-+++.+.+.+....+ ..+...+|+.+....|.|=-..+..+...+ ..| .+|.+.. -+|. ...+ ..+.
T Consensus 161 ~~~l~~~L~~~l~il~~~~~~~~~g~Vi~lVGpnGvGKTTTiaKLA~~~~~~~G~kkV~lit~Dt~RigA~eQL~~~a~~ 240 (767)
T PRK14723 161 MAWIRNELATHLPVLRDEDALLAQGGVLALVGPTGVGKTTTTAKLAARCVAREGADQLALLTTDSFRIGALEQLRIYGRI 240 (767)
T ss_pred HHHHHHHHHHHhhhccCCCcccCCCeEEEEECCCCCcHHHHHHHHHhhHHHHcCCCeEEEecCcccchHHHHHHHHHHHh
Confidence 34455555554422111 122234565544666655444443343333 345 4665544 3342 2223 3345
Q ss_pred CCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHH---HhcCCeeEEeccCC
Q 012238 197 ARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVI---QEKNHIPFFDVAYQ 272 (467)
Q Consensus 197 ~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~---~~~~~~li~Deay~ 272 (467)
.|+.+..+ .|++++.+.+++......++|-+.+-||.- .+..+++..++ .....++|.|..++
T Consensus 241 ~gvpv~~~---------~~~~~l~~al~~~~~~D~VLIDTAGRs~~d----~~l~eel~~l~~~~~p~e~~LVLsAt~~ 306 (767)
T PRK14723 241 LGVPVHAV---------KDAADLRFALAALGDKHLVLIDTVGMSQRD----RNVSEQIAMLCGVGRPVRRLLLLNAASH 306 (767)
T ss_pred CCCCcccc---------CCHHHHHHHHHHhcCCCEEEEeCCCCCccC----HHHHHHHHHHhccCCCCeEEEEECCCCc
Confidence 55433221 267778887776544444444333434431 22333333333 33568888887743
No 472
>KOG0622 consensus Ornithine decarboxylase [Amino acid transport and metabolism]
Probab=32.01 E-value=3.9e+02 Score=27.01 Aligned_cols=81 Identities=11% Similarity=0.084 Sum_probs=53.5
Q ss_pred CCCEEEEcCCCCc-chHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCC-------CC
Q 012238 176 PGAKVLISSPTWG-NHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGID-------PT 247 (467)
Q Consensus 176 ~gd~Vlv~~P~y~-~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~-------~~ 247 (467)
+.++++..+||-. .+...+...|+.+-.++. .+++.+..+. ++...+++-.++.-++++. .+
T Consensus 122 ~P~riIyanpcK~~s~IkyAa~~gV~~~tfDn---------e~el~kv~~~-hP~a~llLrIatdds~a~~~l~~KFG~~ 191 (448)
T KOG0622|consen 122 SPERIIYANPCKQVSQIKYAAKHGVSVMTFDN---------EEELEKVAKS-HPNANLLLRIATDDSTATCRLNLKFGCS 191 (448)
T ss_pred ChHHeEecCCCccHHHHHHHHHcCCeEEeecC---------HHHHHHHHHh-CCCceEEEEEccCCCcccccccCccCCC
Confidence 5689999999985 455666677876655422 2455554444 3555555555544454333 46
Q ss_pred HHHHHHHHHHHHhcCCeeE
Q 012238 248 PEQWEKIADVIQEKNHIPF 266 (467)
Q Consensus 248 ~~~l~~l~~~~~~~~~~li 266 (467)
.+..+.|.+.++++++-++
T Consensus 192 ~~~~~~lLd~ak~l~lnvv 210 (448)
T KOG0622|consen 192 LDNCRHLLDMAKELELNVV 210 (448)
T ss_pred HHHHHHHHHHHHHcCceEE
Confidence 7799999999999987766
No 473
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase. Members of this family are the trehalose biosynthetic enzyme malto-oligosyltrehalose trehalohydrolase, formally known as 4-alpha-D-{(1-4)-alpha-D-glucano}trehalose trehalohydrolase (EC 3.2.1.141). It is the TreZ protein of the TreYZ pathway for trehalose biosynthesis, and alternative to the OtsAB system.
Probab=31.97 E-value=80 Score=33.37 Aligned_cols=31 Identities=19% Similarity=0.313 Sum_probs=27.4
Q ss_pred CCCHHHHHHHHHHHHhcCCeeEEeccCCCCC
Q 012238 245 DPTPEQWEKIADVIQEKNHIPFFDVAYQGFA 275 (467)
Q Consensus 245 ~~~~~~l~~l~~~~~~~~~~li~Deay~~~~ 275 (467)
.-+.++++++++.|+++|+-||.|-+|.+..
T Consensus 156 ~G~~~e~k~lV~~aH~~Gi~VilD~V~NH~~ 186 (542)
T TIGR02402 156 YGGPDDLKALVDAAHGLGLGVILDVVYNHFG 186 (542)
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEEccCCCC
Confidence 3358999999999999999999999988765
No 474
>PF04412 DUF521: Protein of unknown function (DUF521); InterPro: IPR007506 This is a group of hypothetical proteins.
Probab=31.75 E-value=1e+02 Score=31.04 Aligned_cols=44 Identities=14% Similarity=0.250 Sum_probs=33.8
Q ss_pred CCChhhHHHHHHcC----CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcC
Q 012238 213 GLDFEGMIADIKAA----PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKN 262 (467)
Q Consensus 213 ~~d~~~l~~~l~~~----~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~ 262 (467)
.++.+++++.+++. ..+..++++.+|| ++.+|+.+|+++++.++
T Consensus 269 ~i~~~dl~~~~~~l~~~~~~~~D~V~lGcPH------~S~~El~~ia~ll~gr~ 316 (400)
T PF04412_consen 269 TITDADLEEVYEELNTAGDEKVDLVALGCPH------LSLEELREIAELLEGRK 316 (400)
T ss_pred EeCHHHHHHHHHHhccCCCCCCCEEEECCCC------CCHHHHHHHHHHHhCCC
Confidence 35666666655542 3567799999999 88999999999998765
No 475
>COG1875 NYN ribonuclease and ATPase of PhoH family domains [General function prediction only]
Probab=31.66 E-value=1.5e+02 Score=29.53 Aligned_cols=29 Identities=31% Similarity=0.314 Sum_probs=18.5
Q ss_pred chhHHHHHHHHHHHhC--CCCEEEEcCCCCc
Q 012238 160 GTGSLRLAAALIERYF--PGAKVLISSPTWG 188 (467)
Q Consensus 160 gt~al~l~~~~l~~~~--~gd~Vlv~~P~y~ 188 (467)
|.-.+.+++.+...+. .-++|+|..|.++
T Consensus 257 GKTlLALaAgleqv~e~~~y~KiiVtRp~vp 287 (436)
T COG1875 257 GKTLLALAAGLEQVLERKRYRKIIVTRPTVP 287 (436)
T ss_pred cHhHHHHHHHHHHHHHHhhhceEEEecCCcC
Confidence 3445555554544444 3479999999986
No 476
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=31.10 E-value=38 Score=32.15 Aligned_cols=30 Identities=17% Similarity=0.265 Sum_probs=26.5
Q ss_pred CHHHHHHHHHHHHhcCCeeEEeccCCCCCC
Q 012238 247 TPEQWEKIADVIQEKNHIPFFDVAYQGFAS 276 (467)
Q Consensus 247 ~~~~l~~l~~~~~~~~~~li~Deay~~~~~ 276 (467)
+.++++++++.|+++|+-||.|-++-+...
T Consensus 50 t~~d~~~Lv~~~h~~gi~VilD~V~NH~~~ 79 (316)
T PF00128_consen 50 TMEDFKELVDAAHKRGIKVILDVVPNHTSD 79 (316)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEETSEEET
T ss_pred hhhhhhhhhhccccccceEEEeeecccccc
Confidence 489999999999999999999999776554
No 477
>PF03786 UxuA: D-mannonate dehydratase (UxuA); InterPro: IPR004628 This Fe2+-requiring enzyme plays a role in D-glucuronate catabolism in Escherichia coli. Mannonate dehydratase converts D-mannonate to 2-dehydro-3-deoxy-D-gluconate. An apparent equivalog is found in a glucuronate utilization operon in Bacillus stearothermophilus T-6.; GO: 0008927 mannonate dehydratase activity, 0006064 glucuronate catabolic process; PDB: 1TZ9_A 3FVM_A 3BDK_B 3BAN_B 3DBN_B.
Probab=30.62 E-value=93 Score=30.66 Aligned_cols=51 Identities=12% Similarity=-0.018 Sum_probs=31.2
Q ss_pred ChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEE
Q 012238 215 DFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFF 267 (467)
Q Consensus 215 d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~ 267 (467)
|+..|....+. .+..-++...++.|.|.+++.+++.++.+.++++|+.+-+
T Consensus 13 dpv~l~~irQ~--~Gv~giV~al~~~p~g~~W~~e~i~~~k~~ie~~GL~~~v 63 (351)
T PF03786_consen 13 DPVTLWDIRQQ--PGVTGIVTALHDIPNGEVWDYEEIRALKERIEAAGLTLSV 63 (351)
T ss_dssp -SS-HHHHCTS--TTEEEEEE--SSS-TTS---HHHHHHHHHHHHCTT-EEEE
T ss_pred CcchHHHHHHh--cCCCCeeeCCCCCCCCCCCCHHHHHHHHHHHHHcCCeEEE
Confidence 55555443332 3555666677999999999999999999999999976544
No 478
>cd06564 GH20_DspB_LnbB-like Glycosyl hydrolase family 20 (GH20) catalytic domain of dispersin B (DspB), lacto-N-biosidase (LnbB) and related proteins. Dispersin B is a soluble beta-N-acetylglucosamidase found in bacteria that hydrolyzes the beta-1,6-linkages of PGA (poly-beta-(1,6)-N-acetylglucosamine), a major component of the extracellular polysaccharide matrix. Lacto-N-biosidase hydrolyzes lacto-N-biose (LNB) type I oligosaccharides at the nonreducing terminus to produce lacto-N-biose as part of the GNB/LNB (galacto-N-biose/lacto-N-biose I) degradation pathway. The lacto-N-biosidase from Bifidobacterium bifidum has this GH20 domain, a carbohydrate binding module 32, and a bacterial immunoglobulin-like domain 2, as well as a YSIRK signal peptide and a G5 membrane anchor at the N and C termini, respectively. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=30.41 E-value=54 Score=32.05 Aligned_cols=26 Identities=8% Similarity=0.059 Sum_probs=23.4
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCeeE
Q 012238 241 PTGIDPTPEQWEKIADVIQEKNHIPF 266 (467)
Q Consensus 241 PTG~~~~~~~l~~l~~~~~~~~~~li 266 (467)
+.+-.|+.+|+++|++.|+++|+-||
T Consensus 74 ~~~~~YT~~di~eiv~yA~~rgI~vI 99 (326)
T cd06564 74 ANDGYYTKEEFKELIAYAKDRGVNII 99 (326)
T ss_pred CCCCcccHHHHHHHHHHHHHcCCeEe
Confidence 45778999999999999999999887
No 479
>PLN02970 serine racemase
Probab=30.40 E-value=2.1e+02 Score=27.96 Aligned_cols=53 Identities=15% Similarity=-0.086 Sum_probs=35.3
Q ss_pred ceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeee
Q 012238 151 RVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRY 206 (467)
Q Consensus 151 ~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~ 206 (467)
.|+. ..+|+.++.++.. .+.+.-.-.|++|..+...-...++.+|++++.++-
T Consensus 77 ~vv~--aSsGN~g~alA~~-a~~~G~~~~ivvp~~~~~~k~~~~~~~GA~Vi~~~~ 129 (328)
T PLN02970 77 GVVT--HSSGNHAAALALA-AKLRGIPAYIVVPKNAPACKVDAVIRYGGIITWCEP 129 (328)
T ss_pred eEEE--ECCcHHHHHHHHH-HHHcCCCEEEEECCCCCHHHHHHHHhcCCEEEEeCC
Confidence 4665 7888888888721 122222246677666655567778999999998763
No 480
>KOG1467 consensus Translation initiation factor 2B, delta subunit (eIF-2Bdelta/GCD2) [Translation, ribosomal structure and biogenesis]
Probab=30.36 E-value=4.6e+02 Score=27.06 Aligned_cols=108 Identities=14% Similarity=0.075 Sum_probs=64.5
Q ss_pred cccCceeeeecCCchhHHHHHHHHHHHhCCC--CEEEEcC--CCCcch--HHHHhhCCCCeEEeeeecCCCCCCChhhHH
Q 012238 147 LKEQRVATVQGLSGTGSLRLAAALIERYFPG--AKVLISS--PTWGNH--KNIFNDARVPWSEYRYYDPKTVGLDFEGMI 220 (467)
Q Consensus 147 ~~~~~i~~~~t~ggt~al~l~~~~l~~~~~g--d~Vlv~~--P~y~~~--~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~ 220 (467)
+....+++ |-|.+..++.+ ++.....| =+|+|.+ |.+.+- ...+...|+++.++-+. .++ -+
T Consensus 357 I~dgdvil--tyg~s~vV~~i--ll~A~~~~k~frVvVVDSRP~~EG~~~lr~Lv~~GinctYv~I~-----a~s--yi- 424 (556)
T KOG1467|consen 357 IQDGDVLL--TYGSSSVVNMI--LLEAKELGKKFRVVVVDSRPNLEGRKLLRRLVDRGINCTYVLIN-----AAS--YI- 424 (556)
T ss_pred hhcCCEEE--EecchHHHHHH--HHHHHHhCcceEEEEEeCCCCcchHHHHHHHHHcCCCeEEEEeh-----hHH--HH-
Confidence 33456777 78887777776 44444333 2555543 666543 33455678777776552 011 11
Q ss_pred HHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEe-ccC
Q 012238 221 ADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFD-VAY 271 (467)
Q Consensus 221 ~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~D-eay 271 (467)
+. +-+++++=++.--..|.+|++.--..++=+++.+|+.+|+= |.|
T Consensus 425 --m~---evtkvfLGahailsNG~vysR~GTa~valvAna~nVPVlVCCE~y 471 (556)
T KOG1467|consen 425 --ML---EVTKVFLGAHAILSNGAVYSRVGTACVALVANAFNVPVLVCCEAY 471 (556)
T ss_pred --HH---hcceeeechhhhhcCcchhhhcchHHHHHHhcccCCCEEEEechh
Confidence 11 33455554444455699999887777887888899988754 444
No 481
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=30.12 E-value=2.6e+02 Score=26.93 Aligned_cols=56 Identities=13% Similarity=0.137 Sum_probs=33.9
Q ss_pred cccCceeeeecCCchhHHHHHHHHHHHhCCCCEE--EEcCCCCcchHHHHhhCCCCeEEeee
Q 012238 147 LKEQRVATVQGLSGTGSLRLAAALIERYFPGAKV--LISSPTWGNHKNIFNDARVPWSEYRY 206 (467)
Q Consensus 147 ~~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~V--lv~~P~y~~~~~~~~~~G~~~~~v~~ 206 (467)
+.+...++..| +|+-++.++ +.+.. .|=++ .+|+..-......++.+|++++.+|-
T Consensus 59 l~pG~tIVE~T-SGNTGI~LA--~vaa~-~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 59 LKPGGTIVEAT-SGNTGIALA--MVAAA-KGYRLIIVMPETMSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred CCCCCEEEEcC-CChHHHHHH--HHHHH-cCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence 44555555444 445557776 33333 45433 33333335667889999999999876
No 482
>COG0157 NadC Nicotinate-nucleotide pyrophosphorylase [Coenzyme metabolism]
Probab=29.70 E-value=3.7e+02 Score=25.54 Aligned_cols=123 Identities=17% Similarity=0.202 Sum_probs=74.2
Q ss_pred cCCchhHHHHHHHHHHHhCC--------CCEEEEcCCCC---cchHHHHh----hCCCCe-EEeeeecCCCCCCChhhHH
Q 012238 157 GLSGTGSLRLAAALIERYFP--------GAKVLISSPTW---GNHKNIFN----DARVPW-SEYRYYDPKTVGLDFEGMI 220 (467)
Q Consensus 157 t~ggt~al~l~~~~l~~~~~--------gd~Vlv~~P~y---~~~~~~~~----~~G~~~-~~v~~~~~~~~~~d~~~l~ 220 (467)
|-=.+.++.++...--...- .|.|++-+..- +....+++ ..+..+ ++|.+ -++++++
T Consensus 130 TRKT~PglR~leKyAV~~GGG~nHR~gLsDavliKDNHia~~g~i~~Av~~aR~~~~~~~kIEVEv-------esle~~~ 202 (280)
T COG0157 130 TRKTTPGLRLLEKYAVRAGGGDNHRFGLSDAVLIKDNHIAAAGSITEAVRRARAAAPFTKKIEVEV-------ESLEEAE 202 (280)
T ss_pred ccCCCccHHHHHHHHHHhcCCccccCCCcceEEehhhHHHHhccHHHHHHHHHHhCCCCceEEEEc-------CCHHHHH
Confidence 66677777775433222222 26777766321 23334433 233333 56655 3688999
Q ss_pred HHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEe
Q 012238 221 ADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQ 300 (467)
Q Consensus 221 ~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 300 (467)
++++ .++.+|.+-| ++++++++.++++...+-.++ |+-.+. ....++.++..+-++|.++
T Consensus 203 eAl~---agaDiImLDN--------m~~e~~~~av~~l~~~~~~~l--EaSGgI-------t~~ni~~yA~tGVD~IS~g 262 (280)
T COG0157 203 EALE---AGADIIMLDN--------MSPEELKEAVKLLGLAGRALL--EASGGI-------TLENIREYAETGVDVISVG 262 (280)
T ss_pred HHHH---cCCCEEEecC--------CCHHHHHHHHHHhccCCceEE--EEeCCC-------CHHHHHHHhhcCCCEEEeC
Confidence 9998 4566777654 448999999998754553333 332333 3346777888888999888
Q ss_pred cCccCc
Q 012238 301 SYSKNL 306 (467)
Q Consensus 301 S~SK~~ 306 (467)
.+++..
T Consensus 263 alths~ 268 (280)
T COG0157 263 ALTHSA 268 (280)
T ss_pred ccccCC
Confidence 877754
No 483
>PF08672 APC2: Anaphase promoting complex (APC) subunit 2; InterPro: IPR014786 The anaphase-promoting complex (APC) or cyclosome is a multi-subunit E3 protein ubiquitin ligase that regulates important events in mitosis such as the initiation of anaphase and exit from telophase. The APC, in conjunction with other enzymes, assembles multi-ubiquitin chains on a variety of regulatory proteins, thereby targeting them for proteolysis by the 26S proteasome. Anaphase is initiated when the APC triggers the destruction of securin, thereby allowing the protease, separase, to disrupt sister-chromatid cohesion. Securin ubiquitination by the APC is inhibited by cyclin-dependent kinase 1 (Cdk1)-dependent phosphorylation []. Forkhead Box M1 (FoxM1), which is a transcription factor that is over-expressed in many cancers, is degraded in late mitosis and early G1 phase by the APC/cyclosome (APC/C) E3 ubiquitin ligase []. The APC/C targets mitotic cyclins for destruction in mitosis and G1 phase and is then inactivated at S phase. It thereby generates alternating states of high and low cyclin-Cdk activity, which is required for the alternation of mitosis and DNA replication []. The APC/C is composed of at least 13 subunits that stay tightly associated throughout the cell cycle: APC1, APC2, APC4, APC5, APC9, APC11, CDC16, CDC23, CDC26, CDC27, DOC1, MND2 and SWM1[], []. In fission yeast the 13 subunits are known as: Apc1, Apc2, Nuc2, Apc4, Apc5, Cut9, Apc8, Apc10, Apc11, Hcn1, Apc13, Apc14 and Apc15 []. This entry represents a C-terminal domain found in APC subunit 2. ; PDB: 1LDD_A.
Probab=29.52 E-value=46 Score=23.54 Aligned_cols=35 Identities=20% Similarity=0.380 Sum_probs=23.3
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCC
Q 012238 238 AHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ 272 (467)
Q Consensus 238 p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~ 272 (467)
+..|++...+.++++++.+-..+.+.+.+.+..|.
T Consensus 25 ~~~~~~~~~s~~eL~~fL~~lv~e~~L~~~~G~Yk 59 (60)
T PF08672_consen 25 PKDPGGYDISLEELQEFLDRLVEEGKLECSGGSYK 59 (60)
T ss_dssp -GGG--TT--HHHHHHHHHHHHHTTSEE--TTEEE
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHCCcEEecCCEEe
Confidence 35678888999999999998888888888777663
No 484
>TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit. ATP citrate lyases appear to form an outgroup.
Probab=29.39 E-value=3.4e+02 Score=25.97 Aligned_cols=47 Identities=13% Similarity=0.058 Sum_probs=27.3
Q ss_pred ChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEecc
Q 012238 215 DFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVA 270 (467)
Q Consensus 215 d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Dea 270 (467)
-++.+++..+. .-..+++++.. ++..+-++|.++++++|+.++==.+
T Consensus 76 v~~~l~e~~~~--Gvk~avIis~G-------f~e~~~~~l~~~a~~~girilGPNc 122 (286)
T TIGR01019 76 AADAIFEAIDA--GIELIVCITEG-------IPVHDMLKVKRYMEESGTRLIGPNC 122 (286)
T ss_pred HHHHHHHHHHC--CCCEEEEECCC-------CCHHHHHHHHHHHHHcCCEEECCCC
Confidence 34556665552 22234443332 2344457899999999998874443
No 485
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=29.02 E-value=2.3e+02 Score=25.81 Aligned_cols=72 Identities=10% Similarity=0.100 Sum_probs=47.9
Q ss_pred CEEEEcCCCCc-------chHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHH
Q 012238 178 AKVLISSPTWG-------NHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQ 250 (467)
Q Consensus 178 d~Vlv~~P~y~-------~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~ 250 (467)
.+|++..+.=. -...+++..|++++.+.. ...++++.+.+.+ .++.++.++.-.++| ...
T Consensus 89 ~~vvl~t~~gd~HdiG~~iv~~~l~~~G~~Vi~LG~------~vp~e~~v~~~~~--~~~~~V~lS~~~~~~-----~~~ 155 (213)
T cd02069 89 GKIVLATVKGDVHDIGKNLVGVILSNNGYEVIDLGV------MVPIEKILEAAKE--HKADIIGLSGLLVPS-----LDE 155 (213)
T ss_pred CeEEEEeCCCchhHHHHHHHHHHHHhCCCEEEECCC------CCCHHHHHHHHHH--cCCCEEEEccchhcc-----HHH
Confidence 36666654432 234567889999988754 2677888888886 455566666544333 677
Q ss_pred HHHHHHHHHhcC
Q 012238 251 WEKIADVIQEKN 262 (467)
Q Consensus 251 l~~l~~~~~~~~ 262 (467)
.+++++..++.+
T Consensus 156 ~~~~i~~L~~~~ 167 (213)
T cd02069 156 MVEVAEEMNRRG 167 (213)
T ss_pred HHHHHHHHHhcC
Confidence 888888888764
No 486
>PRK11864 2-ketoisovalerate ferredoxin oxidoreductase subunit beta; Provisional
Probab=28.87 E-value=3.9e+02 Score=25.84 Aligned_cols=70 Identities=21% Similarity=0.222 Sum_probs=44.9
Q ss_pred HHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcC--CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEE
Q 012238 191 KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA--PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFF 267 (467)
Q Consensus 191 ~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~--~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~ 267 (467)
..++..+|+..+..-. . .++.++.+.+++. .+...+|.+-+|+. +|..++.++-.++.+++.+-|.|.+.
T Consensus 164 ~~i~~a~g~~yVA~~~--~----~~~~~~~~~i~~A~~~~Gps~I~~~spC~-~~~~~~~~~~~~~~k~Av~tg~wply 235 (300)
T PRK11864 164 PDIMAAHKVPYVATAS--I----AYPEDFIRKLKKAKEIRGFKFIHLLAPCP-PGWRFDPDKTIEIARLAVETGVWPLF 235 (300)
T ss_pred HHHHHHcCCCEEEEEe--C----CCHHHHHHHHHHHHhCCCCEEEEEeCCCC-CCCCcChHHHHHHHHHHHHcCCceEE
Confidence 4566667775554211 1 3555555555442 24555666666664 78888888888999999888877664
No 487
>TIGR01343 hacA_fam homoaconitate hydratase family protein. This model represents a subfamily of proteins consisting of aconitase, homoaconitase, 3-isopropylmalate dehydratase, and uncharacterized proteins. The majority of the members of this family have been designated as 3-isopropylmalate dehydratase large subunit (LeuC) in microbial genome annotation, but the only characterized member is Thermus thermophilus homoaconitase, an enzyme of a non-aspartate pathway of Lys biosynthesis.
Probab=28.72 E-value=2.4e+02 Score=28.53 Aligned_cols=72 Identities=17% Similarity=0.150 Sum_probs=44.8
Q ss_pred EEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHH-HHhcCCeEEEEecCccCcccC
Q 012238 231 FILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRL-FATRGMELLVAQSYSKNLGLY 309 (467)
Q Consensus 231 ~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~S~SK~~~~~ 309 (467)
+++++...+-|+...-..+..+.+.++|++||+.-+.|-- .++... ..... +...++-++-..|.+-++|.-
T Consensus 55 ~v~~~~DH~~p~~~~~~a~~~~~~r~fa~~~gi~~~~~~g-~GI~H~------v~~E~g~~~PG~~iig~DSHT~t~Gal 127 (412)
T TIGR01343 55 RIVIVVDHVVPASTIKAAEMQKLAREFVKKTGIKHFFDVG-EGICHQ------VLPEEGLVKPGDLVVGADSHTCTYGAL 127 (412)
T ss_pred cEEEEcCCCCCCCChhHHHHHHHHHHHHHHcCCceeecCC-CCEEEE------EchhhCcCCCCcEEEecCCCcCCcCch
Confidence 4555566667777766678889999999999997555632 233221 01111 334455666677777777643
No 488
>cd01585 AcnA_Bact Aconitase catalyzes the reversible isomerization of citrate and isocitrate as part of the TCA cycle. Bacterial Aconitase-like catalytic domain. Aconitase (aconitate hydratase or citrate hydrolyase) catalyzes the reversible isomerization of citrate and isocitrate as part of the TCA cycle. Cis-aconitate is formed as an intermediate product during the course of the reaction. This distinct subfamily is found only in bacteria and Archaea. Its exact characteristics are not known.
Probab=28.52 E-value=3e+02 Score=27.58 Aligned_cols=71 Identities=14% Similarity=0.062 Sum_probs=45.5
Q ss_pred EEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEecCccCcccCC
Q 012238 232 ILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYA 310 (467)
Q Consensus 232 ~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G 310 (467)
++++...+-|+...-..+....+-++++++|+. +.|.- +++... . .+..++..++-++--.|.+-++|.-|
T Consensus 30 ~~~~~DH~~p~~~~~~a~~~~~lr~~a~~~gi~-~~~~g-~GI~H~-----v-~~E~~~~PG~~ivg~DSHT~t~GalG 100 (380)
T cd01585 30 SVSYVDHNTLQTDFENADDHRFLQTVAARYGIY-FSRPG-NGICHQ-----V-HLERFAVPGKTLLGSDSHTPTAGGLG 100 (380)
T ss_pred eEEEeCCCCCCCChHHHHHHHHHHHHHHHcCCE-EECCC-CCeeee-----e-cHhhccCCCCEEEecCcCcCCCCccc
Confidence 555666777887766778899999999999985 44532 333321 1 11123445666677778888776433
No 489
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=28.00 E-value=3.7e+02 Score=25.12 Aligned_cols=95 Identities=19% Similarity=0.153 Sum_probs=51.6
Q ss_pred ceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCC-ChhhHHHHHHcCCCC
Q 012238 151 RVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGL-DFEGMIADIKAAPGG 229 (467)
Q Consensus 151 ~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~-d~~~l~~~l~~~~~~ 229 (467)
+|++ ..|.+++-.++.. +...|. |+++--+ .|.............+.. +++ |.+++++.+++ .+
T Consensus 2 ~ILv--lgGTtE~r~la~~---L~~~g~-v~~sv~t--~~g~~~~~~~~~~~~v~~-----G~lg~~~~l~~~l~~--~~ 66 (249)
T PF02571_consen 2 KILV--LGGTTEGRKLAER---LAEAGY-VIVSVAT--SYGGELLKPELPGLEVRV-----GRLGDEEGLAEFLRE--NG 66 (249)
T ss_pred EEEE--EechHHHHHHHHH---HHhcCC-EEEEEEh--hhhHhhhccccCCceEEE-----CCCCCHHHHHHHHHh--CC
Confidence 4666 6888999888632 344565 5543322 222222211111122222 346 89999999986 34
Q ss_pred cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeE
Q 012238 230 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPF 266 (467)
Q Consensus 230 ~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li 266 (467)
..+|+-. ..|= ..+-=+.+.+.|++.|+..+
T Consensus 67 i~~vIDA--THPf----A~~is~na~~a~~~~~ipyl 97 (249)
T PF02571_consen 67 IDAVIDA--THPF----AAEISQNAIEACRELGIPYL 97 (249)
T ss_pred CcEEEEC--CCch----HHHHHHHHHHHHhhcCcceE
Confidence 4455532 2333 23334567788888887766
No 490
>PRK06988 putative formyltransferase; Provisional
Probab=27.98 E-value=3.2e+02 Score=26.44 Aligned_cols=88 Identities=17% Similarity=0.097 Sum_probs=50.0
Q ss_pred CChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEE-eccCCCCCCCCCCCChhHHHHHHhc
Q 012238 214 LDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFF-DVAYQGFASGSLDNDASSVRLFATR 292 (467)
Q Consensus 214 ~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~-Deay~~~~~~~~~~~~~~~~~~~~~ 292 (467)
+-...|+..++. ....+.++++|.+|.+.... ..+.++|+++|+.++. ++. . +...+..+...
T Consensus 13 ~a~~~L~~L~~~--~~~i~~Vvt~~d~~~~~~~~----~~v~~~A~~~gip~~~~~~~----~------~~~~~~~l~~~ 76 (312)
T PRK06988 13 VGVRCLQVLLAR--GVDVALVVTHEDNPTENIWF----GSVAAVAAEHGIPVITPADP----N------DPELRAAVAAA 76 (312)
T ss_pred HHHHHHHHHHhC--CCCEEEEEcCCCCCccCcCC----CHHHHHHHHcCCcEEccccC----C------CHHHHHHHHhc
Confidence 344556665653 23456667888888774322 2466679999998774 221 0 11123334445
Q ss_pred CCeEEEEecCccCcc---cCCCccceEE
Q 012238 293 GMELLVAQSYSKNLG---LYAERIGAMN 317 (467)
Q Consensus 293 ~~~~i~~~S~SK~~~---~~G~RiG~~~ 317 (467)
..+++++.+|.+.+. +.-.+.|.+.
T Consensus 77 ~~Dliv~~~~~~iip~~il~~~~~g~iN 104 (312)
T PRK06988 77 APDFIFSFYYRHMIPVDLLALAPRGAYN 104 (312)
T ss_pred CCCEEEEehhccccCHHHHhcCCCCEEE
Confidence 567888888887663 1123456654
No 491
>PF01008 IF-2B: Initiation factor 2 subunit family; InterPro: IPR000649 Initiation factor 2 binds to Met-tRNA, GTP and the small ribosomal subunit. The eukaryotic translation initiation factor EIF-2B is a complex made up of five different subunits, alpha, beta, gamma, delta and epsilon, and catalyses the exchange of EIF-2-bound GDP for GTP. This family includes initiation factor 2B alpha, beta and delta subunits from eukaryotes; related proteins from archaebacteria and IF-2 from prokaryotes and also contains a subfamily of proteins in eukaryotes, archaeae (e.g. Pyrococcus furiosus), or eubacteria such as Bacillus subtilis and Thermotoga maritima. Many of these proteins were initially annotated as putative translation initiation factors despite the fact that there is no evidence for the requirement of an IF2 recycling factor in prokaryotic translation initiation. Recently, one of these proteins from B. subtilis has been functionally characterised as a 5-methylthioribose-1-phosphate isomerase (MTNA) []. This enzyme participates in the methionine salvage pathway catalysing the isomerisation of 5-methylthioribose-1-phosphate to 5-methylthioribulose-1-phosphate []. The methionine salvage pathway leads to the synthesis of methionine from methylthioadenosine, the end product of the spermidine and spermine anabolism in many species.; GO: 0044237 cellular metabolic process; PDB: 1VB5_A 1T5O_D 3A11_E 3VM6_C 1W2W_A 1T9K_A 3ECS_B 2YRF_A 2YVK_B 2A0U_A ....
Probab=27.88 E-value=3.1e+02 Score=25.90 Aligned_cols=119 Identities=11% Similarity=-0.012 Sum_probs=55.9
Q ss_pred HHHHHHHHHHhCCCCcccccCceeeeecCCchhHHHHHHHHHHHhCCC--CEEEEcC--CCCcc--hHHHHhhCCCCeEE
Q 012238 130 AFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPG--AKVLISS--PTWGN--HKNIFNDARVPWSE 203 (467)
Q Consensus 130 ~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~al~l~~~~l~~~~~g--d~Vlv~~--P~y~~--~~~~~~~~G~~~~~ 203 (467)
..++.++++.... +....+++ |.|-+..+..+ +......| =+|+|.+ |.+.+ ....+...|.++..
T Consensus 92 ~~~~~I~~~~~~~----I~~~~~IL--T~~~S~~v~~~--l~~a~~~~~~~~V~v~es~P~~eG~~~a~~L~~~gi~v~~ 163 (282)
T PF01008_consen 92 QAREKIADHASEL----INDGDTIL--THGYSSTVERF--LLSAKKKGKKFRVIVLESRPYNEGRLMAKELAEAGIPVTL 163 (282)
T ss_dssp HHHHHHHHHHHCC----C-TTEEEE--EES--SHHHHH--HHHHHHTTEEEEEEEE--TTTTHHHTHHHHHHHTT-EEEE
T ss_pred HHHHHHHHHHHHh----ccCCeEEE--EeCCchHHHHH--HHHHHHcCCeEEEEEccCCcchhhhhHHHHhhhcceeEEE
Confidence 4445555554332 33456666 78877777665 34333344 2566665 66654 33444567877776
Q ss_pred eeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEe
Q 012238 204 YRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFD 268 (467)
Q Consensus 204 v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~D 268 (467)
++. ..+-..+.+ .-.++++=...--+.|.++..-=-..++-.|+++++.+++=
T Consensus 164 i~d----------~~~~~~m~~--~vd~VliGad~v~~nG~v~nk~Gt~~~a~~Ak~~~vPv~v~ 216 (282)
T PF01008_consen 164 IPD----------SAVGYVMPR--DVDKVLIGADAVLANGGVVNKVGTLQLALAAKEFNVPVYVL 216 (282)
T ss_dssp E-G----------GGHHHHHHC--TESEEEEE-SEEETTS-EEEETTHHHHHHHHHHTT-EEEEE
T ss_pred Eec----------hHHHHHHHH--hCCeeEEeeeEEecCCCEeehhhHHHHHHHHHhhCCCEEEE
Confidence 643 334444442 02223322222223343333222345666788899877764
No 492
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=27.84 E-value=4.5e+02 Score=23.58 Aligned_cols=38 Identities=24% Similarity=0.213 Sum_probs=26.0
Q ss_pred ccCceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcch
Q 012238 148 KEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNH 190 (467)
Q Consensus 148 ~~~~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~ 190 (467)
+..+|++ ..||.-|...+. .++..|..|.+.+|.+...
T Consensus 9 ~~k~vLV--IGgG~va~~ka~---~Ll~~ga~V~VIs~~~~~~ 46 (202)
T PRK06718 9 SNKRVVI--VGGGKVAGRRAI---TLLKYGAHIVVISPELTEN 46 (202)
T ss_pred CCCEEEE--ECCCHHHHHHHH---HHHHCCCeEEEEcCCCCHH
Confidence 3457877 788888877752 3345677888888887543
No 493
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=27.80 E-value=5.1e+02 Score=24.20 Aligned_cols=92 Identities=18% Similarity=0.153 Sum_probs=54.1
Q ss_pred ceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCC-CcchHHHHhhCCCCeEEeeeecCCCCCC-ChhhHHHHHHcCCC
Q 012238 151 RVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPT-WGNHKNIFNDARVPWSEYRYYDPKTVGL-DFEGMIADIKAAPG 228 (467)
Q Consensus 151 ~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~-y~~~~~~~~~~G~~~~~v~~~~~~~~~~-d~~~l~~~l~~~~~ 228 (467)
.|++ ..|.+++-.++..+ ...|-.|++..-+ |.. ....+. .+. .+++ |.+++++.+++ .
T Consensus 4 ~Ilv--lgGT~egr~la~~L---~~~g~~v~~Svat~~g~----~~~~~~---~v~-----~G~l~~~~~l~~~l~~--~ 64 (248)
T PRK08057 4 RILL--LGGTSEARALARAL---AAAGVDIVLSLAGRTGG----PADLPG---PVR-----VGGFGGAEGLAAYLRE--E 64 (248)
T ss_pred eEEE--EechHHHHHHHHHH---HhCCCeEEEEEccCCCC----cccCCc---eEE-----ECCCCCHHHHHHHHHH--C
Confidence 5777 78889988887433 3456666665433 332 222222 111 2457 89999999986 4
Q ss_pred CcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEE
Q 012238 229 GSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFF 267 (467)
Q Consensus 229 ~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~li~ 267 (467)
+..+|+-. ..| |..+--+.+.+.|++.|+..+-
T Consensus 65 ~i~~VIDA--THP----fA~~is~~a~~ac~~~~ipyiR 97 (248)
T PRK08057 65 GIDLVIDA--THP----YAAQISANAAAACRALGIPYLR 97 (248)
T ss_pred CCCEEEEC--CCc----cHHHHHHHHHHHHHHhCCcEEE
Confidence 44455533 233 2333345677889998887663
No 494
>COG0505 CarA Carbamoylphosphate synthase small subunit [Amino acid transport and metabolism / Nucleotide transport and metabolism]
Probab=27.74 E-value=1e+02 Score=30.23 Aligned_cols=57 Identities=14% Similarity=0.042 Sum_probs=35.9
Q ss_pred CCEEEEcCCCCc-chHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCC
Q 012238 177 GAKVLISSPTWG-NHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGI 244 (467)
Q Consensus 177 gd~Vlv~~P~y~-~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~ 244 (467)
+.+|++.+-+.- +....+...|+++..+|.. .+.+++.+. + ..-+++-|-|.+|.-.
T Consensus 179 ~~~Vv~iD~GvK~nIlr~L~~rg~~vtVVP~~------t~~eeIl~~-~----pDGiflSNGPGDP~~~ 236 (368)
T COG0505 179 GKHVVVIDFGVKRNILRELVKRGCRVTVVPAD------TSAEEILAL-N----PDGIFLSNGPGDPAPL 236 (368)
T ss_pred CcEEEEEEcCccHHHHHHHHHCCCeEEEEcCC------CCHHHHHhh-C----CCEEEEeCCCCChhHH
Confidence 457777776653 6666777889999999883 455655442 1 1234444558888543
No 495
>PRK08638 threonine dehydratase; Validated
Probab=27.50 E-value=2.1e+02 Score=28.07 Aligned_cols=52 Identities=10% Similarity=-0.103 Sum_probs=33.4
Q ss_pred ceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEee
Q 012238 151 RVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYR 205 (467)
Q Consensus 151 ~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~ 205 (467)
.|+. +.+|+.++.++... +.+.-.-.|++|......-...++.+|++++.++
T Consensus 77 ~vv~--~SsGN~g~alA~~a-a~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~ 128 (333)
T PRK08638 77 GVVA--CSAGNHAQGVALSC-ALLGIDGKVVMPKGAPKSKVAATCGYGAEVVLHG 128 (333)
T ss_pred eEEE--eCCcHHHHHHHHHH-HHcCCCEEEEeCCCCcHHHHHHHHHcCCEEEEEC
Confidence 4655 78888888887221 2222224566665555556678899999998764
No 496
>TIGR01761 thiaz-red thiazolinyl imide reductase. This reductase is found associated with gene clusters for the biosynthesis of various non-ribosomal peptide derived natural products in which cysteine is cyclized to a thiazoline ring containing an imide double bond. Examples include yersiniabactin (irp3/YbtU) and pyochelin (PchG).
Probab=27.37 E-value=3.3e+02 Score=26.89 Aligned_cols=69 Identities=12% Similarity=0.113 Sum_probs=34.5
Q ss_pred CCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCee
Q 012238 186 TWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIP 265 (467)
Q Consensus 186 ~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~l~~~~~~~~~~l 265 (467)
.|..+.+++....+.++.++...+. ..-.+...++++ .+.-+++ .=|-. .+|.+++++.|+++|+.+
T Consensus 52 ~y~~~eell~d~Di~~V~ipt~~P~--~~H~e~a~~aL~---aGkHVL~----EKPla----~~Ea~el~~~A~~~g~~l 118 (343)
T TIGR01761 52 LYCEVEELPDDIDIACVVVRSAIVG--GQGSALARALLA---RGIHVLQ----EHPLH----PRDIQDLLRLAERQGRRY 118 (343)
T ss_pred ccCCHHHHhcCCCEEEEEeCCCCCC--ccHHHHHHHHHh---CCCeEEE----cCCCC----HHHHHHHHHHHHHcCCEE
Confidence 5666666664444444444321011 122344444554 3333444 33332 467777777777777776
Q ss_pred EE
Q 012238 266 FF 267 (467)
Q Consensus 266 i~ 267 (467)
.+
T Consensus 119 ~v 120 (343)
T TIGR01761 119 LV 120 (343)
T ss_pred EE
Confidence 65
No 497
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=27.31 E-value=4.6e+02 Score=23.54 Aligned_cols=95 Identities=13% Similarity=0.088 Sum_probs=43.5
Q ss_pred ceeeeecCCchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHc---CC
Q 012238 151 RVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKA---AP 227 (467)
Q Consensus 151 ~i~~~~t~ggt~al~l~~~~l~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~---~~ 227 (467)
.+++ .|+++.+-... .......|..|.+...............+.++..++.+ --|.+.+++.+++ .-
T Consensus 8 ~vlI---tGa~g~iG~~l-a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D-----~~~~~~~~~~~~~~~~~~ 78 (245)
T PRK12936 8 KALV---TGASGGIGEEI-ARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPAN-----LSDRDEVKALGQKAEADL 78 (245)
T ss_pred EEEE---ECCCChHHHHH-HHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEcc-----CCCHHHHHHHHHHHHHHc
Confidence 4554 66666665541 12234578777765543333333333344455444442 1345555554432 11
Q ss_pred CCcEEEEeCCCCCCCCC--CCCHHHHHHH
Q 012238 228 GGSFILLHGCAHNPTGI--DPTPEQWEKI 254 (467)
Q Consensus 228 ~~~~~i~i~~p~NPTG~--~~~~~~l~~l 254 (467)
.+..+++++....+.+. ..+.+++++.
T Consensus 79 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~ 107 (245)
T PRK12936 79 EGVDILVNNAGITKDGLFVRMSDEDWDSV 107 (245)
T ss_pred CCCCEEEECCCCCCCCccccCCHHHHHHH
Confidence 23456665544332221 2244555443
No 498
>TIGR00649 MG423 conserved hypothetical protein. Contains an ATP-binding domain at the N-terminal end of the protein. Possibly part of a superfamily of beta-lactmases
Probab=27.21 E-value=5.7e+02 Score=25.86 Aligned_cols=74 Identities=11% Similarity=0.041 Sum_probs=41.7
Q ss_pred CCCEEEEcCCCCcchH-----H----HHhhCCCCeEE-eeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCC
Q 012238 176 PGAKVLISSPTWGNHK-----N----IFNDARVPWSE-YRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGID 245 (467)
Q Consensus 176 ~gd~Vlv~~P~y~~~~-----~----~~~~~G~~~~~-v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~ 245 (467)
+||.|+...+.++++. . .+...|+++.. +.+ .+--+-++|...++...++..+-+ +..
T Consensus 318 ~~d~vi~s~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~h~----SgHa~~~dl~~~i~~~~Pk~~ipv--Hge------ 385 (422)
T TIGR00649 318 KGDTVVFSAPPIPGNENIAVSILLDIRLNEVGARVIKRIHV----SGHASQEDHKLLLRLLKPKYIIPV--HGE------ 385 (422)
T ss_pred CCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCEEEeceEe----cCCCCHHHHHHHHHHhCCCEEEec--CCc------
Confidence 6789999987777655 1 23346666543 222 223455666666654334433333 222
Q ss_pred CCHHHHHHHHHHHHhcCC
Q 012238 246 PTPEQWEKIADVIQEKNH 263 (467)
Q Consensus 246 ~~~~~l~~l~~~~~~~~~ 263 (467)
...+...++++++.|+
T Consensus 386 --~~~~~~~~~~a~~~g~ 401 (422)
T TIGR00649 386 --YRMLINHTKLAEEEGY 401 (422)
T ss_pred --HHHHHHHHHHHHHcCC
Confidence 3467777777876664
No 499
>cd00758 MoCF_BD MoCF_BD: molybdenum cofactor (MoCF) binding domain (BD). This domain is found a variety of proteins involved in biosynthesis of molybdopterin cofactor, like MoaB, MogA, and MoeA. The domain is presumed to bind molybdopterin.
Probab=26.90 E-value=1.5e+02 Score=24.40 Aligned_cols=59 Identities=15% Similarity=0.070 Sum_probs=35.2
Q ss_pred hHHHHhhCCCCeEEeeeecCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHH
Q 012238 190 HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEK 253 (467)
Q Consensus 190 ~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~~~~~l~~ 253 (467)
....++..|+++..+..-. -|.+.+.+.+++.-....+++.+-..-++-..+.++-+++
T Consensus 24 l~~~l~~~G~~v~~~~~v~-----Dd~~~i~~~i~~~~~~~DlvittGG~g~g~~D~t~~ai~~ 82 (133)
T cd00758 24 LEALLEDLGCEVIYAGVVP-----DDADSIRAALIEASREADLVLTTGGTGVGRRDVTPEALAE 82 (133)
T ss_pred HHHHHHHCCCEEEEeeecC-----CCHHHHHHHHHHHHhcCCEEEECCCCCCCCCcchHHHHHH
Confidence 4556778898887775532 3567777776543223557776666555555555553333
No 500
>PLN02960 alpha-amylase
Probab=26.89 E-value=1e+02 Score=34.29 Aligned_cols=37 Identities=16% Similarity=0.251 Sum_probs=31.6
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCC
Q 012238 241 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASG 277 (467)
Q Consensus 241 PTG~~~~~~~l~~l~~~~~~~~~~li~Deay~~~~~~ 277 (467)
|++..-++++++++++.|.++|+-||.|-+|.++..+
T Consensus 458 ~~~~yGtp~dfk~LVd~aH~~GI~VILDvV~NH~~~d 494 (897)
T PLN02960 458 VSSRFGTPDDFKRLVDEAHGLGLLVFLDIVHSYAAAD 494 (897)
T ss_pred cccccCCHHHHHHHHHHHHHCCCEEEEEecccccCCc
Confidence 4455557899999999999999999999999888754
Done!