Query         012241
Match_columns 467
No_of_seqs    259 out of 809
Neff          6.3 
Searched_HMMs 46136
Date          Fri Mar 29 00:33:10 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012241.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012241hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG1889 Putative phosphoinosit 100.0  3E-132  7E-137 1025.1  33.9  449    4-466    51-576 (579)
  2 COG5329 Phosphoinositide polyp 100.0  5E-103  1E-107  820.5  35.5  372    4-384    57-507 (570)
  3 KOG1890 Phosphoinositide phosp 100.0 5.2E-95 1.1E-99  749.8  23.6  369    5-381    46-540 (949)
  4 KOG1888 Putative phosphoinosit 100.0   1E-90 2.2E-95  740.8  27.1  378    3-387    85-572 (868)
  5 KOG0566 Inositol-1,4,5-triphos 100.0   1E-87 2.3E-92  724.8  29.7  367    3-381    56-503 (1080)
  6 PF02383 Syja_N:  SacI homology 100.0 1.3E-86 2.7E-91  674.8  23.0  294    7-302     1-319 (319)
  7 PF15214 PXT1:  Peroxisomal tes  51.2     3.9 8.5E-05   30.3  -0.5   10  116-125    42-51  (51)
  8 KOG0566 Inositol-1,4,5-triphos  35.8      38 0.00083   39.6   3.9   37   20-56     80-118 (1080)
  9 PHA02762 hypothetical protein;  27.0      76  0.0017   24.2   2.9   35  152-186     5-41  (62)
 10 TIGR03237 dnd_assoc_2 dnd syst  24.1 1.4E+02  0.0031   36.2   6.0   44  236-279   721-768 (1256)
 11 COG1867 TRM1 N2,N2-dimethylgua  20.6      64  0.0014   34.1   2.1   47  283-332   314-364 (380)

No 1  
>KOG1889 consensus Putative phosphoinositide phosphatase [Lipid transport and metabolism]
Probab=100.00  E-value=3.4e-132  Score=1025.09  Aligned_cols=449  Identities=49%  Similarity=0.837  Sum_probs=422.3

Q ss_pred             cceEEEEeeeeeecccCceEEEEEEceeEeeeeCCccEEEEEeEEEEeCCCCCCCCchhhhhhhHHHHHHHHhhhcCCce
Q 012241            4 CNYYYALIACLYVCMLLGSYLIVITERECVGSYLGHPIYKVASLKILPCDHSLNNSSAEQKKVEAEFSCLLKLAERTPGL   83 (467)
Q Consensus         4 ~~~i~GilG~i~~~l~~~~yLvvIt~~~~Vg~i~g~~Iy~I~~~~~ipl~~~~~~~~~~~~~~E~~~l~llk~~l~s~~f   83 (467)
                      ++.++|++|.|+  |..+.||+|||+++.+|.+.||+||+|+++++||+..+  ++++++.+.|.+|.++|+.++.+++|
T Consensus        51 ~~~i~gv~G~ik--L~~~~ylivvt~~~~vg~~~gh~i~~v~~~~iIp~k~~--~~~~~q~k~~~~~~~lL~~~lkt~~f  126 (579)
T KOG1889|consen   51 IRSIFGVLGMIK--LLAGSYLIVVTEAESVGQFNGHVIYRITDFEIIPYKKT--NLTEEQIKMETEFSNLLSHVLKTGGF  126 (579)
T ss_pred             eeeeeeeeeEEE--EecCcEEEEEEehhhhccccCcceEEEeeeeEEEeecC--CchHHHHHHHHHHHHHHHHHHhcCce
Confidence            578999999999  99999999999999999999999999999999999987  67778888888999999999999999


Q ss_pred             EEecCCCccchhhhhcccCCCCCCCccccCCCCcceechhhhHHHHhC-CCCCceeeeeeceeEeeEEeecCceEEEEEE
Q 012241           84 YFSYDTNLTLSVQRLNTLGDESKLLPLWRQAEPRFLWNNYLMEALIDN-KLDPFLLPVIQGSFHHFQTAIGRDIIDVTLI  162 (467)
Q Consensus        84 YFSy~~DLT~s~Q~~~~~~~~~~~~~~~~~~d~rF~WN~~l~~~l~~~-~~~~~~lpvI~Gfv~~~~~~~~~~~~~~~LI  162 (467)
                      ||||+||||+|+||+++.+++....|+|+++|+||+||.+|++.|+++ +.+.|++|+||||+++..+.++++.+.++||
T Consensus       127 yfSyt~dlT~slqrl~~~~~~~~~~~l~~~ad~rFlwN~~ll~~~~~~~~~~~f~lpvi~Gf~~~~~~~i~~~tv~l~lI  206 (579)
T KOG1889|consen  127 YFSYTYDLTNSLQRLHENADEGKALSLWRRADKRFLWNGYLLEDLIDNAKVDLFILPVIQGFIGSVDVGINGKTVDLTLI  206 (579)
T ss_pred             EEEEEEccchHHHhhhhccccccccchhhhcccceeecchhHHHHhcCccccchhhHHhhhhhheeeEeeccceEEEEEe
Confidence            999999999999999998888888889999999999999999999998 5899999999999999999999999999999


Q ss_pred             eeeccCCCCcccccccCCCCCceeeeeeEeEEEEeCCeEEEEEEeecCCCeeeeEccCCCcCceeeecCCCccHHHHHHH
Q 012241          163 ARRCTRRNGTRMWRRGADSDGYVANFVETEQVVQMNGFMASFVQVRGSIPFLWEQTVDLTYKPKFEILRAEEAPRVVERH  242 (467)
Q Consensus       163 SRRS~~raGtRy~~RGiD~~G~vANfVETEqIv~~~~~~~SfvQiRGSVPlfW~Q~~~l~~kP~i~i~~~~~~~~a~~kH  242 (467)
                      ||||+.||||||++||+|++||||||||||||+..++..+||||+|||||+||+|.++|+|||++.+.+.+++..|+.||
T Consensus       207 sRRs~~RaGtRyfrRG~D~~G~vaNfvETEQIv~~~~~~~SFvQ~RGSiP~~W~qv~nL~YkP~~~l~~~~~~~~~~~rh  286 (579)
T KOG1889|consen  207 SRRSIRRAGTRYFRRGSDEDGYVANFVETEQIVEYNGHTTSFVQTRGSIPFFWEQVPNLRYKPKPVLVPPENALAAFGRH  286 (579)
T ss_pred             ehhhhhccceeEEecccCCcccccccceeeEEEEecCcEEEEEEeccCccchHHhcCCCccCCceeecChHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhCCcEEEeCccCCCchhhHHHHHHHHHhhccCCCceeeechhhhhhcCcccchHHHHHHHHHHHHHhcCeEEe
Q 012241          243 FLDLRKKYGNVLAVDLVNKHGGEGRLCENFGNAMQNVASDDIRYLHFDFHRICGHVHFERLSILFEQIEDFLEKNGYLLL  322 (467)
Q Consensus       243 F~~L~~~YG~v~~vNLl~~~g~E~~L~~ay~~~v~~l~~~~i~y~~fDfh~~ck~~~~~~l~~L~~~l~~~l~~~g~f~~  322 (467)
                      |++|++.||++++|||+||||+|++|.++||+.+..++++.|+|++||||+||++|+|+|+++|+++|++.++++|||..
T Consensus       287 F~~~~~~YG~~v~VNLvnqKG~E~~l~~~ye~~~~~~~~~~irYv~FDFHkec~~m~wdrl~lll~~ie~~~~~~gy~~~  366 (579)
T KOG1889|consen  287 FDELRKKYGDVVAVNLVNQKGREGPLKEGYEKVVRRLNNPPIRYVHFDFHKECGHMRWDRLSLLLEQIEQELEEFGYFLL  366 (579)
T ss_pred             HHHHHHHhCCEEEEEeecccCcccchhhHHHHHHHhcCCCCceEEEeehhhhccccchhhHHHHHHHHHHHHHhcCEEEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999987


Q ss_pred             c--------CCCceEeecccccccccc-----------------------------------------------------
Q 012241          323 N--------EKDNVDLVCVPVCCRDNV-----------------------------------------------------  341 (467)
Q Consensus       323 ~--------~~g~iRtNCiDCLDRTNv-----------------------------------------------------  341 (467)
                      +        |.|++|||||||||||||                                                     
T Consensus       367 ~~~g~~~~~Q~gvvRTNCmDCLDRTNVvQs~lar~~L~~qL~~~gVl~~~~~le~~~~f~~~fk~iWAdngD~iS~qYSG  446 (579)
T KOG1889|consen  367 DSNGKTVLEQTGVVRTNCMDCLDRTNVVQSMLARWSLQKQLRKLGVLHAGQKLEEADPFESIFKNLWADNGDYISIQYSG  446 (579)
T ss_pred             ecCCceeeeecCeeeccchhhccchhHHHHHHHHHHHHHHHHhcCeeccccchhhcccHHHHHHHhhhcccchhhhhccC
Confidence            6        457789999999999999                                                     


Q ss_pred             -----------cchhhhhhhhhhhhhhhhcccccCCCcchhhHHHHhhcCcccccCCCC--CCCccccc--hhHHHHHHH
Q 012241          342 -----------DLRTMQGILNDGWNALARYYLNNFCDGTKQDAIDLLQGHYIVSVSRDI--APPSQNAG--LEAMASFPL  406 (467)
Q Consensus       342 -----------Gkrt~~G~l~D~~~S~~Ryy~NnF~Dg~rQdaidL~lG~~~~~~~~~~--~~~~~~~~--~~~~~~~~~  406 (467)
                                 |+||..|+++||+||+.|||+|||.||.|||||||+||+|+|.++...  |.|.+..+  ...+.++++
T Consensus       447 T~ALKtDFtR~G~RT~~Ga~~Dg~Ns~~RYylNNf~DG~rQDsiDL~lG~f~v~~s~s~~~pl~~~~~~~~~~~p~i~lv  526 (579)
T KOG1889|consen  447 TGALKTDFTRTGKRTIVGALKDGWNSFRRYYLNNFADGTRQDSIDLFLGNFRVDVSRSDLSPLPLRRGLYILAAPIIFLV  526 (579)
T ss_pred             CcccccceeeccceeehhhhHhHHHHHHHHHHhcccCccccchHHHhcCCcccccccccCCCcccccCceeehhhHHHHH
Confidence                       999999999999999999999999999999999999999999988853  44444222  333455778


Q ss_pred             HHHHHHHHHHHhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhcCccccccCCCCCCC
Q 012241          407 ALSLVLTGLFFATLSLRQVRYDLKHLLFSFIWASLSVALAAFVRAKGRLFCNRPRLHKPQ  466 (467)
Q Consensus       407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~v~~P~l~~~~  466 (467)
                      |++|++++++++          +.++++.+||++++++++.+|+.||.+|||||||+.|.
T Consensus       527 a~~m~~is~l~~----------~~~l~~~l~w~~~~~~s~~~i~~~g~~fvnwPrl~~p~  576 (579)
T KOG1889|consen  527 ALSMFIISLLFS----------TPNLLYRLFWFAIMVVSIAVILINGDQFVNWPRLVLPQ  576 (579)
T ss_pred             HHHHHHHHHHhC----------CchHHHHHHHHHHHHHHHHhheechHHhcCCccccCcc
Confidence            888888887764          56899999999999999999999999999999999874


No 2  
>COG5329 Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
Probab=100.00  E-value=5.1e-103  Score=820.45  Aligned_cols=372  Identities=37%  Similarity=0.610  Sum_probs=343.8

Q ss_pred             cceEEEEeeeeeecccCceEEEEEEceeEeeeeCCccEEEEEeEEEEeCCCCCCCCchhhhhhhHHHHH--HHHhhhcCC
Q 012241            4 CNYYYALIACLYVCMLLGSYLIVITERECVGSYLGHPIYKVASLKILPCDHSLNNSSAEQKKVEAEFSC--LLKLAERTP   81 (467)
Q Consensus         4 ~~~i~GilG~i~~~l~~~~yLvvIt~~~~Vg~i~g~~Iy~I~~~~~ipl~~~~~~~~~~~~~~E~~~l~--llk~~l~s~   81 (467)
                      ..+++|++|+|.  +....||++||+++.||.++||.||||.+|+|+|++++.+..  +...||.++.+  .+|.+++++
T Consensus        57 ~~~i~g~~Gli~--l~~~~yl~~it~~s~v~~~~g~~IykI~~vdfi~l~~~~~d~--~~~~~~~~~~~~~~lk~Lls~g  132 (570)
T COG5329          57 AHKIYGVIGLIK--LKGDIYLIVITGASLVGVIPGHSIYKILDVDFISLNNNKWDD--ELEEDEANYDKLSELKKLLSNG  132 (570)
T ss_pred             ceeEEeEEEEEE--ecCcEEEEEEecceEEeeeCCcceEEEeeeEEEEccccccch--hhhhhhhhhhhhhhhhhhhcCC
Confidence            467999999999  999999999999999999999999999999999999876533  22235666666  788899999


Q ss_pred             ceEEecCCCccchhhhhcccCCCCCCCccccCCCCcceechhhhHHHHhCC---------CCCceeeeeeceeEeeEEee
Q 012241           82 GLYFSYDTNLTLSVQRLNTLGDESKLLPLWRQAEPRFLWNNYLMEALIDNK---------LDPFLLPVIQGSFHHFQTAI  152 (467)
Q Consensus        82 ~fYFSy~~DLT~s~Q~~~~~~~~~~~~~~~~~~d~rF~WN~~l~~~l~~~~---------~~~~~lpvI~Gfv~~~~~~~  152 (467)
                      .|||||+||||+++|+....    ...+.++++|.+|+||.+|+++|+.+.         .+.|++++|+||+++..+.+
T Consensus       133 tFYfS~~~diTn~lQ~~~~~----~~~~~~~~~d~~f~wN~fl~~e~i~~r~~~~~~~k~~~~flt~vIrGf~~t~~~~~  208 (570)
T COG5329         133 TFYFSYDFDITNSLQKNLSE----GLEASVDRADLIFMWNSFLLEEFINHRSKLSSLEKQFDNFLTTVIRGFAETVDIKV  208 (570)
T ss_pred             cEEEecccchhhhhhhcccc----CccccccchhheeecchhhHHHHHhhcccCChhhhcccchheeeeeeeeeeEEEee
Confidence            99999999999999987221    245678889999999999999998753         23499999999999999999


Q ss_pred             cCceEEEEEEeeeccCCCCcccccccCCCCCceeeeeeEeEEEEeCCeEEEEEEeecCCCeeeeEccCCCcCceeeecCC
Q 012241          153 GRDIIDVTLIARRCTRRNGTRMWRRGADSDGYVANFVETEQVVQMNGFMASFVQVRGSIPFLWEQTVDLTYKPKFEILRA  232 (467)
Q Consensus       153 ~~~~~~~~LISRRS~~raGtRy~~RGiD~~G~vANfVETEqIv~~~~~~~SfvQiRGSVPlfW~Q~~~l~~kP~i~i~~~  232 (467)
                      +++++.++||||||++||||||++||||++||||||||||||+.....++||||+|||||+||+| .++.|.|||.|.+.
T Consensus       209 ~~~~i~ltLISR~S~~raGtRy~~RGiDddGnvsnFVETE~Iv~~~~~~fSf~QvRGSIPifWeq-~~~l~~pkI~i~~s  287 (570)
T COG5329         209 GGNTISLTLISRRSSERAGTRYLSRGIDDDGNVSNFVETEQIVTDSQYIFSFTQVRGSIPLFWEQ-SNLLYGPKIKVTRS  287 (570)
T ss_pred             cCceEEEEEEEeehhhcccceeeccccCCCCcccceeeeEEEEEecceEEEEEEecCceeeEEhh-hccccCCCeEEecc
Confidence            99999999999999999999999999999999999999999999999999999999999999999 67788999999986


Q ss_pred             -CccHHHHHHHHHHHHHhhCCcEEEeCccCCCchhhHHHHHHHHHhhccCCCceeeechhhhhhcCcccchHHHHHHHHH
Q 012241          233 -EEAPRVVERHFLDLRKKYGNVLAVDLVNKHGGEGRLCENFGNAMQNVASDDIRYLHFDFHRICGHVHFERLSILFEQIE  311 (467)
Q Consensus       233 -~~~~~a~~kHF~~L~~~YG~v~~vNLl~~~g~E~~L~~ay~~~v~~l~~~~i~y~~fDfh~~ck~~~~~~l~~L~~~l~  311 (467)
                       +.+++||++||++|.++||+|++||||+.||+|.+|.++|++++...+.+++.|++||||++|+.++|+.++.|+..++
T Consensus       288 ~~a~~~af~kHF~~L~~~YG~v~vvNLl~tK~~E~~L~~~ye~~l~~~~~~~i~~~~fdfh~e~~~~~~~~~~~Ll~~i~  367 (570)
T COG5329         288 SEAAQSAFDKHFDKLREKYGDVYVVNLLKTKGYEAPLLELYEKHLDLSKKPKIHYTEFDFHKETSQDGFDDVKKLLYLIE  367 (570)
T ss_pred             chhhHHHHHHHHHHHHHHcCCEEEEEcccCCcchhHHHHHHHHHHhhCCCCCceeEEEeehhcccccccccHHHHHHHHH
Confidence             4589999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcCeEEec---------CCCceEeecccccccccc-----------------------------------------
Q 012241          312 DFLEKNGYLLLN---------EKDNVDLVCVPVCCRDNV-----------------------------------------  341 (467)
Q Consensus       312 ~~l~~~g~f~~~---------~~g~iRtNCiDCLDRTNv-----------------------------------------  341 (467)
                      +++.++|||..|         |+|++|||||||||||||                                         
T Consensus       368 ~~l~~~gy~~~d~~~~~~~s~Q~GV~RtNClDCLDRTNviQ~~Isr~~le~~~~~~~i~~~~~~fl~~~~~LWaDNgd~i  447 (570)
T COG5329         368 QDLLEFGYFAYDINEGKSISEQDGVFRTNCLDCLDRTNVIQSLISRVLLEQFRSEGVISDGYSPFLQIHRELWADNGDAI  447 (570)
T ss_pred             HHHHhcCceeccccCCceeeeecceEEecchhhcccchHHHHHHHHHHHHHHHhhhhhcccccHHHHHHHHHHhhchhHH
Confidence            999999999843         679999999999999999                                         


Q ss_pred             -----------------cchhhhhhhhhhhhhhhhcccccCCCcchhhHHHHhhcCcccc
Q 012241          342 -----------------DLRTMQGILNDGWNALARYYLNNFCDGTKQDAIDLLQGHYIVS  384 (467)
Q Consensus       342 -----------------Gkrt~~G~l~D~~~S~~Ryy~NnF~Dg~rQdaidL~lG~~~~~  384 (467)
                                       |+|++.|+++|+.+|++|||+|||.|+.|||+|||+||.+.+.
T Consensus       448 s~~YTGt~alks~fTr~g~~s~~gal~D~~~S~~R~y~nnf~D~~rQ~~idllLg~~~~~  507 (570)
T COG5329         448 SRLYTGTGALKSSFTRRGRRSFAGALNDFIKSFSRYYINNFTDGQRQDAIDLLLGKFRPQ  507 (570)
T ss_pred             HHHhcCCccccchhhhhcchhhhhhhhhhhhhhHHhhcccccchhhhhHHHHHhccCCCc
Confidence                             9999999999999999999999999999999999999999553


No 3  
>KOG1890 consensus Phosphoinositide phosphatase SAC1 [Lipid transport and metabolism]
Probab=100.00  E-value=5.2e-95  Score=749.75  Aligned_cols=369  Identities=31%  Similarity=0.564  Sum_probs=329.8

Q ss_pred             ceEEEEeeeeeecccCc--eEEEEEEceeEeeeeCC-ccEEEEEeEEEEeCCCCCC-------C-----------Cch--
Q 012241            5 NYYYALIACLYVCMLLG--SYLIVITERECVGSYLG-HPIYKVASLKILPCDHSLN-------N-----------SSA--   61 (467)
Q Consensus         5 ~~i~GilG~i~~~l~~~--~yLvvIt~~~~Vg~i~g-~~Iy~I~~~~~ipl~~~~~-------~-----------~~~--   61 (467)
                      ..+.|++|.|.  |...  ++|++|.++..||.++| |.|++|+++..+++..+..       +           +++  
T Consensus        46 G~veg~iGkIs--l~~~~~~~L~~v~~~s~Vg~l~g~H~v~ki~~i~~ls~~~pd~dl~~ckkhh~~~n~~~~i~Pss~~  123 (949)
T KOG1890|consen   46 GNVEGLIGKIS--LDEQHEPFLFFVVDSSVVGCLRGSHSVRKIERIIALSVKSPDTDLSVCKKHHSVSNNNNAITPSSGG  123 (949)
T ss_pred             cceeeeEEEEe--ccccCCceEEEEEeeeeEEEecCCceeeeEEEEEEEecCCCCccchhhhhhccccCCCCcccCCCCc
Confidence            34789999999  8775  59999999999999975 9999999999998765210       0           000  


Q ss_pred             ---------------------------hhhhhhHHHH-HHHHhhhcCCceEEecCCCccchhhhhcccCCCCCCCccccC
Q 012241           62 ---------------------------EQKKVEAEFS-CLLKLAERTPGLYFSYDTNLTLSVQRLNTLGDESKLLPLWRQ  113 (467)
Q Consensus        62 ---------------------------~~~~~E~~~l-~llk~~l~s~~fYFSy~~DLT~s~Q~~~~~~~~~~~~~~~~~  113 (467)
                                                 +....|++.+ +++|.+..+.+||||.++|+|+|+||+..-..+.     ...
T Consensus       124 sKfl~kt~~~iksn~~a~n~kkVk~srEpr~ierrlleellK~F~ds~sFYfs~~~DvTns~Qr~~~~~re~-----~s~  198 (949)
T KOG1890|consen  124 SKFLKKTTEKIKSNFAAANTKKVKKSREPRHIERRLLEELLKLFNDSKSFYFSRSRDVTNSSQRYEFEKREA-----HST  198 (949)
T ss_pred             chHHHHHHHHHHhhccccchhhhhcccCcchhhHHHHHHHHHHhccccceEEEeecccccHHhhhhhhhccc-----ccC
Confidence                                       0011244444 4678888999999999999999999975433221     135


Q ss_pred             CCCcceechhhhHHHHhCCCC--CceeeeeeceeEeeEEeecCc---eEEEEEEeeeccCCCCcccccccCCCCCceeee
Q 012241          114 AEPRFLWNNYLMEALIDNKLD--PFLLPVIQGSFHHFQTAIGRD---IIDVTLIARRCTRRNGTRMWRRGADSDGYVANF  188 (467)
Q Consensus       114 ~d~rF~WN~~l~~~l~~~~~~--~~~lpvI~Gfv~~~~~~~~~~---~~~~~LISRRS~~raGtRy~~RGiD~~G~vANf  188 (467)
                      .|+|||||++|.++|.+.+++  .|++|+||||+...++.+++.   -++++||||||++|||+||.+||+|+.||||||
T Consensus       199 ~ddrFFWNK~Mi~dL~e~~~~D~~wi~PiiQGfvq~e~lvi~de~~c~ftialiSRRSrhRAG~RYkRRGvDe~gNvANy  278 (949)
T KOG1890|consen  199 SDDRFFWNKRMIGDLGEAKISDKKWICPIIQGFVQTEQLVITDEINCYFTIALISRRSRHRAGARYKRRGVDEAGNVANY  278 (949)
T ss_pred             ccchhhhHHHHHhhHhhcCCCCccEeehhhhhhhhhheEEeccccceEEEEEeeechhhhhccchhhhcCcccccchhhh
Confidence            699999999999999998863  599999999999999988765   389999999999999999999999999999999


Q ss_pred             eeEeEEEEeCCeEEEEEEeecCCCeeeeEccCCCcCceeeecCC-CccHHHHHHHHHHHHHhhCCcEEEeCccCCCchhh
Q 012241          189 VETEQVVQMNGFMASFVQVRGSIPFLWEQTVDLTYKPKFEILRA-EEAPRVVERHFLDLRKKYGNVLAVDLVNKHGGEGR  267 (467)
Q Consensus       189 VETEqIv~~~~~~~SfvQiRGSVPlfW~Q~~~l~~kP~i~i~~~-~~~~~a~~kHF~~L~~~YG~v~~vNLl~~~g~E~~  267 (467)
                      ||||||+-..++..||||+|||||+||+|. +.+|.|++++.+. +++..+|..||.++++.||.+++|||++|.|+|++
T Consensus       279 VETEqil~~~~H~LSFvQ~RGSvPvfWSQ~-GykYrPpprldRsv~ET~~~F~~HF~~~l~~Y~~~vivnLVdQ~GrEk~  357 (949)
T KOG1890|consen  279 VETEQILNIFEHELSFVQCRGSVPVFWSQR-GYKYRPPPRLDRSVEETHGVFTEHFKRLLAHYDTLVIVNLVDQRGREKP  357 (949)
T ss_pred             hhHHHHHHhhhceeeEEEeecccceeeccc-CcccCCCccccchHHHHHHHHHHHHHHHHHhhCcEEEEEhhhhcCcccc
Confidence            999999999999999999999999999996 7899999999886 68999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCceeeechhhhhhcCcccchHHHHHHHHHHHHHhcCeEEecCCC-------ceEeeccccccccc
Q 012241          268 LCENFGNAMQNVASDDIRYLHFDFHRICGHVHFERLSILFEQIEDFLEKNGYLLLNEKD-------NVDLVCVPVCCRDN  340 (467)
Q Consensus       268 L~~ay~~~v~~l~~~~i~y~~fDfh~~ck~~~~~~l~~L~~~l~~~l~~~g~f~~~~~g-------~iRtNCiDCLDRTN  340 (467)
                      +++||.+++-.++++++.|+.||||.+|++|+|++++.|++.+.+.+..+||+|.|+.|       ++|+||||||||||
T Consensus       358 igdayl~hvvk~nn~~ltyvsFDfH~hCRGm~FenvqtLida~~~~~~~mgfcWvD~~Gvic~QkgvfRvNCmDCLDRTN  437 (949)
T KOG1890|consen  358 IGDAYLEHVVKANNNDLTYVSFDFHQHCRGMNFENVQTLIDAMEETLKTMGFCWVDKTGVICSQKGVFRVNCMDCLDRTN  437 (949)
T ss_pred             hHHHHHHHHHcccCCceEEEEeehHHhhCccchhhHHHHHHHHHHHHhhceeEEecccceeecccceEEeehhhhhchhh
Confidence            99999999999999999999999999999999999999999999999999999988655       55999999999999


Q ss_pred             c--------------------------------------------------------------cchhhhhhhhhhhhhhh
Q 012241          341 V--------------------------------------------------------------DLRTMQGILNDGWNALA  358 (467)
Q Consensus       341 v--------------------------------------------------------------Gkrt~~G~l~D~~~S~~  358 (467)
                      |                                                              |.|.++|+|+||+||+.
T Consensus       438 vVQ~aI~~~V~eqQl~kLGi~pP~~p~Pe~l~~~~q~mWAnNGD~ISrQYAGTaALKGD~TRtGERKl~GvMKDG~NSAn  517 (949)
T KOG1890|consen  438 VVQGAISLFVVEQQLQKLGIFPPLCPPPEVLVQTMQTMWANNGDVISRQYAGTAALKGDVTRTGERKLMGVMKDGYNSAN  517 (949)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhhcCCceeehhhcchhhhcCcccccchHHHhhhhhccccchh
Confidence            9                                                              89999999999999999


Q ss_pred             hcccccCCCcchhhHHHHhhcCc
Q 012241          359 RYYLNNFCDGTKQDAIDLLQGHY  381 (467)
Q Consensus       359 Ryy~NnF~Dg~rQdaidL~lG~~  381 (467)
                      |||++.|.|++||.+|||++|+-
T Consensus       518 RYYL~rfKDayRQa~Idlm~G~~  540 (949)
T KOG1890|consen  518 RYYLTRFKDAYRQAAIDLMTGQT  540 (949)
T ss_pred             HHHHHhhhHHHHHHHHHHhcCCc
Confidence            99999999999999999999987


No 4  
>KOG1888 consensus Putative phosphoinositide phosphatase [Lipid transport and metabolism]
Probab=100.00  E-value=1e-90  Score=740.84  Aligned_cols=378  Identities=30%  Similarity=0.481  Sum_probs=331.5

Q ss_pred             ccceEEEEeeeeeecccCceEEEEEEceeEeeeeCCccEEEEEeEEEEeCCCCCCCCchhhhhhhHHHHHHHHhhhcCCc
Q 012241            3 KCNYYYALIACLYVCMLLGSYLIVITERECVGSYLGHPIYKVASLKILPCDHSLNNSSAEQKKVEAEFSCLLKLAERTPG   82 (467)
Q Consensus         3 ~~~~i~GilG~i~~~l~~~~yLvvIt~~~~Vg~i~g~~Iy~I~~~~~ipl~~~~~~~~~~~~~~E~~~l~llk~~l~s~~   82 (467)
                      +++.+|||+|+++  +..+.||++||++..||.|+||.||+|.++++||+......   .+.++|++|+++++.+..++.
T Consensus        85 ~~t~ayGIlGfvk--Fle~YYLlliTkr~~ia~iggH~VY~I~es~mI~I~~~~vq---~~~~~e~r~~r~fq~vDLt~~  159 (868)
T KOG1888|consen   85 KVTSAYGILGFVK--FLEGYYLLLITKRRQIADIGGHAVYTIDESQMIPIPNDTVQ---PNHANEARYLRYFQNVDLTKD  159 (868)
T ss_pred             eeeeeeeeeeEEE--ecCceEEEEEEcccccccccCceeEEEccceEEEccCCCcC---CCCccHHHHHHHHhhcccccc
Confidence            5778999999999  99999999999999999999999999999999999875322   236789999999999999999


Q ss_pred             eEEecCCCccchhhhhcccCCCCCCCcccc--CCCCcceechhhhHHHHhCCCC-CceeeeeeceeEeeEEeecCceEEE
Q 012241           83 LYFSYDTNLTLSVQRLNTLGDESKLLPLWR--QAEPRFLWNNYLMEALIDNKLD-PFLLPVIQGSFHHFQTAIGRDIIDV  159 (467)
Q Consensus        83 fYFSy~~DLT~s~Q~~~~~~~~~~~~~~~~--~~d~rF~WN~~l~~~l~~~~~~-~~~lpvI~Gfv~~~~~~~~~~~~~~  159 (467)
                      |||||+||||+|+|.+......  ..+.++  .++.+|+||.+|++|+...... .|++-++|||+++..+.+.|+.+.+
T Consensus       160 FYFSYSYditrslQ~N~~~~~~--~~~~~~~~~~~~~FVWN~~Ll~pir~~~~~~~W~v~lvhGf~~Q~~lsi~Gr~~~v  237 (868)
T KOG1888|consen  160 FYFSYSYDITRSLQKNILRSRL--GGPDYEKLEADEMFVWNSFLLQPIRSILLNTDWTVALVHGFFKQSPLSISGRDFYV  237 (868)
T ss_pred             eeEEeehhhhhhhccccccccc--CCcchhhhcccceeEehHhHhHHHHHhccchhHHHHHHhhhhccceehhcCceeEE
Confidence            9999999999999986543321  222222  3577999999999999887666 8999999999999999999999999


Q ss_pred             EEEeeeccCCCCcccccccCCCCCceeeeeeEeEEEEeC--C----eEEEEEEeecCCCeeeeEcc-CCCcCceeeecCC
Q 012241          160 TLIARRCTRRNGTRMWRRGADSDGYVANFVETEQVVQMN--G----FMASFVQVRGSIPFLWEQTV-DLTYKPKFEILRA  232 (467)
Q Consensus       160 ~LISRRS~~raGtRy~~RGiD~~G~vANfVETEqIv~~~--~----~~~SfvQiRGSVPlfW~Q~~-~l~~kP~i~i~~~  232 (467)
                      +||+|||++.|||||.+||+|..|+|||+|||||||+..  +    .++||||.|||||+||+|.. .+..||+|.+...
T Consensus       238 tLiARRSr~fAGTRfLKRG~N~~G~VANeVETEQIV~d~~~~~~~~~~sS~VQ~RGSIPl~WsQd~S~~~~KP~I~l~~~  317 (868)
T KOG1888|consen  238 TLIARRSRHFAGTRFLKRGANSCGDVANEVETEQIVSDDVPGFHAGRISSFVQMRGSIPLFWSQDASRMVPKPDIVLDKR  317 (868)
T ss_pred             EEEEecccccccchHHhccCCCCCCcccceeeeeeEecCcCCCCccceeeeeeccccccceeccchhhcCCCCCeEEecc
Confidence            999999999999999999999999999999999999986  3    79999999999999999986 5679999999999


Q ss_pred             CccHHHHHHHHHHHHHhhCC-cEEEeCccC---CCchhhHHHHHHHHHhhcc-----CCCceeeechhhhhhcCcccchH
Q 012241          233 EEAPRVVERHFLDLRKKYGN-VLAVDLVNK---HGGEGRLCENFGNAMQNVA-----SDDIRYLHFDFHRICGHVHFERL  303 (467)
Q Consensus       233 ~~~~~a~~kHF~~L~~~YG~-v~~vNLl~~---~g~E~~L~~ay~~~v~~l~-----~~~i~y~~fDfh~~ck~~~~~~l  303 (467)
                      |+++++...||++|.++||+ ++|+|||+.   +++|..|.++|+++|..++     .++++|++||+|+..|...-.-|
T Consensus       318 DP~y~~a~lHF~~L~~RYG~PIiilNLIKt~ekr~~E~IL~~eF~~ai~yLNqflp~e~rl~~i~wD~hk~~Ks~~~nVl  397 (868)
T KOG1888|consen  318 DPFYETAALHFDNLVQRYGNPIIILNLIKTNEKRPRESILREEFENAIDYLNQFLPPENRLKYIHWDMHKHSKSKGQNVL  397 (868)
T ss_pred             CCccchHHHHHHHHHHhcCCcEEEEEeeccccCCchhHHHHHHHHHHHHHHhccCCCcceeeeeechHHhhhccCcccHH
Confidence            99999999999999999997 789999975   4799999999999999886     46899999999999887444445


Q ss_pred             HHHHHHHHHHHHhcCeEEe----------------------------cCCCceEeecccccccccc--------------
Q 012241          304 SILFEQIEDFLEKNGYLLL----------------------------NEKDNVDLVCVPVCCRDNV--------------  341 (467)
Q Consensus       304 ~~L~~~l~~~l~~~g~f~~----------------------------~~~g~iRtNCiDCLDRTNv--------------  341 (467)
                      ..|....+..+...|+|..                            -|.|++||||+||||||||              
T Consensus       398 e~L~~~a~~~v~~tG~f~~~~~~~~~~~~~~~~~~~dd~~g~~~~~rlQ~GIlRtNCiDCLDRTN~AQf~~Gk~ALg~QL  477 (868)
T KOG1888|consen  398 EVLEKVAESAVMLTGIFFNMPLRDSLKLSPSPHESADDIEGDVKPPRLQSGILRTNCIDCLDRTNVAQFAIGKAALGCQL  477 (868)
T ss_pred             HHHHHHHhhhHhhhceeecccchhhhhcCCCcccccccccccccchhhcccceeccchhhcccccHHHHHHHHHHHHHHH
Confidence            6677777778999999976                            1468889999999999999              


Q ss_pred             -------------------------------------cc------------hhhhhhhhhhhhhhhhcccccCCCcchhh
Q 012241          342 -------------------------------------DL------------RTMQGILNDGWNALARYYLNNFCDGTKQD  372 (467)
Q Consensus       342 -------------------------------------Gk------------rt~~G~l~D~~~S~~Ryy~NnF~Dg~rQd  372 (467)
                                                           |+            .-+.-.-+|.+.+++|||.|.|.|+.|||
T Consensus       478 ~~LGi~D~p~lelDs~~v~~L~dLye~~GDtlAlQYgGS~lvh~v~tyrk~~~~s~~srd~~~TL~RyYsNaf~D~dkQd  557 (868)
T KOG1888|consen  478 HALGISDKPNLELDSDIVSLLEDLYEEHGDTLALQYGGSQLVHSVKTYRKTAQWSTQSRDFLQTLSRYYSNAFVDADKQD  557 (868)
T ss_pred             HHccCccCcccccCcHHHHHHHHHHHHhhhHHHHHhchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHHHhhccccHHHHH
Confidence                                                 32            22345678999999999999999999999


Q ss_pred             HHHHhhcCcccccCC
Q 012241          373 AIDLLQGHYIVSVSR  387 (467)
Q Consensus       373 aidL~lG~~~~~~~~  387 (467)
                      ||+||||.|.|....
T Consensus       558 aINLFLG~f~P~~g~  572 (868)
T KOG1888|consen  558 AINLFLGVFRPSEGK  572 (868)
T ss_pred             HHHHHhccccccCCC
Confidence            999999999765443


No 5  
>KOG0566 consensus Inositol-1,4,5-triphosphate 5-phosphatase (synaptojanin), INP51/INP52/INP53 family [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00  E-value=1e-87  Score=724.84  Aligned_cols=367  Identities=32%  Similarity=0.485  Sum_probs=319.9

Q ss_pred             ccceEEEEeeeeeecccCceEEEEEEceeEeeeeC-CccEEEEEeEEEEeCCCCCCC--Cchhhhhhh-----HHHHHHH
Q 012241            3 KCNYYYALIACLYVCMLLGSYLIVITERECVGSYL-GHPIYKVASLKILPCDHSLNN--SSAEQKKVE-----AEFSCLL   74 (467)
Q Consensus         3 ~~~~i~GilG~i~~~l~~~~yLvvIt~~~~Vg~i~-g~~Iy~I~~~~~ipl~~~~~~--~~~~~~~~E-----~~~l~ll   74 (467)
                      +...+||+||+++  |.++.++.||++...++.+. ...|++|.+++|+.++++.+.  .-++..++|     .+-+.-|
T Consensus        56 k~~~~yG~LGll~--l~~~~~~~vi~g~~~l~~V~~~~sv~ki~~vdf~~l~~~~~dFi~l~~~~~~~~~~~~~~~~s~L  133 (1080)
T KOG0566|consen   56 KSHDIYGILGLLR--LNGGDFVAVISGVSFLAQVTGSESVGKIEDVDFYSLTNTVWDFISLERSSSPEDTLYPKHPCSEL  133 (1080)
T ss_pred             cceeeeeeeEEEE--EcCCceEEEeccceEEEEecCCceeccccceeEEEeccchhhheecccCCCCccccccccchHHH
Confidence            4678999999999  99999988777777777764 356666666666666654210  000011112     1346678


Q ss_pred             HhhhcCCceEEecCCCccchhhhhcccCCCCCCCccccCCCCcceechhhhHHHHhCC------C--CCceeeeeeceeE
Q 012241           75 KLAERTPGLYFSYDTNLTLSVQRLNTLGDESKLLPLWRQAEPRFLWNNYLMEALIDNK------L--DPFLLPVIQGSFH  146 (467)
Q Consensus        75 k~~l~s~~fYFSy~~DLT~s~Q~~~~~~~~~~~~~~~~~~d~rF~WN~~l~~~l~~~~------~--~~~~lpvI~Gfv~  146 (467)
                      ++++++|.||||.+||||..+|++....         +..|.+|+||++|+.+|+..+      +  +.|++.+|+|||+
T Consensus       134 rkLLssGsFYfS~~fDlt~~~q~rg~~~---------d~~d~~f~WN~~L~~el~~~~s~~k~l~d~~~~Ll~~irG~ve  204 (1080)
T KOG0566|consen  134 RKLLSSGSFYFSSDFDLTCFAQNRGDQT---------DETDLRFFWNRFLHSELINYRSHLKQLLDCDGFLLTVIRGFVE  204 (1080)
T ss_pred             HHHhhCCcEEEeeccchhhHHHhcCCCc---------ccccceeechhHHHHHHHHhhhhhhhccccccHHHHhhhceEE
Confidence            9999999999999999999999874221         235899999999999999865      3  5799999999999


Q ss_pred             eeEEeecCceEEEEEEeeeccCCCCcccccccCCCCCceeeeeeEeEEEEeCCeEEEEEEeecCCCeeeeEccCCCcCce
Q 012241          147 HFQTAIGRDIIDVTLIARRCTRRNGTRMWRRGADSDGYVANFVETEQVVQMNGFMASFVQVRGSIPFLWEQTVDLTYKPK  226 (467)
Q Consensus       147 ~~~~~~~~~~~~~~LISRRS~~raGtRy~~RGiD~~G~vANfVETEqIv~~~~~~~SfvQiRGSVPlfW~Q~~~l~~kP~  226 (467)
                      ...++++.+++.++||||.||+||||||+.||||||||||||||||||++.++.++||+||||||||||+|+....+.|+
T Consensus       205 ~~~iy~g~~~~~~~iISR~S~eragtrf~~rGidddG~VanFVETE~iv~~~~~v~Sf~QIRGSvPlFWEQ~g~~~~s~k  284 (1080)
T KOG0566|consen  205 TRTIYVGANTARMTLISRLSCERAGTRFNVRGIDDDGNVANFVETEQIVYSDQTVFSFTQIRGSVPLFWEQPGVQVGSHK  284 (1080)
T ss_pred             EEEEEeccceeeEEEEEeehhcccCceecccccCCccceeeeeeeEEEEEecCcEEEEEEeccceeeeEeccCcccccce
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999877789999


Q ss_pred             eeecCC-CccHHHHHHHHHHHHHhhCCcEEEeCccCCCchhhHHHHHHHHHhhccC-CCceeeechhhhhhcCcccchHH
Q 012241          227 FEILRA-EEAPRVVERHFLDLRKKYGNVLAVDLVNKHGGEGRLCENFGNAMQNVAS-DDIRYLHFDFHRICGHVHFERLS  304 (467)
Q Consensus       227 i~i~~~-~~~~~a~~kHF~~L~~~YG~v~~vNLl~~~g~E~~L~~ay~~~v~~l~~-~~i~y~~fDfh~~ck~~~~~~l~  304 (467)
                      |++.+. +.+++||.+||..|.++||++++||||..|+.|..|+++|+++++..+. ++|.++.||||++|+..+++.+.
T Consensus       285 v~itR~~easq~aFdrHf~~L~~~YG~v~IVNLLgtk~gE~~Ls~~fk~hl~~s~~~~dv~~t~fDyH~~~~~~~~~~~~  364 (1080)
T KOG0566|consen  285 VKITRSFEASQPAFDRHFSKLREKYGPVYIVNLLGTKEGEESLSEAFKRHLKLSPIKPDVPLTNFDYHAEVSGGKFEALH  364 (1080)
T ss_pred             eEEeccchhhhHHHHHHHHHHHHhcCcEEEEEcccCcchHHHHHHHHHHHHhccCCCCCcceeEEeeccccccCCcchhH
Confidence            999875 7789999999999999999999999999999999999999999987653 48999999999999999999999


Q ss_pred             HHHHHHHHHHHhcCeEEec--------CCCceEeecccccccccc-----------------------------------
Q 012241          305 ILFEQIEDFLEKNGYLLLN--------EKDNVDLVCVPVCCRDNV-----------------------------------  341 (467)
Q Consensus       305 ~L~~~l~~~l~~~g~f~~~--------~~g~iRtNCiDCLDRTNv-----------------------------------  341 (467)
                      .|+..+.+++.++|||..+        |+|++||||+|||||||+                                   
T Consensus       365 kL~~~i~~~~~~~G~f~~~~~~~~~~~Q~GVfRtNcLDCLDRTN~vQ~~Isl~~~~l~le~l~l~~~~~~~~~f~e~~~~  444 (1080)
T KOG0566|consen  365 KLLYLILQDILEFGFFYYDISEGLISEQDGVFRTNCLDCLDRTNVVQSLISLEVLRLQLEDLNLNEKQSVVDRFLEIHRT  444 (1080)
T ss_pred             HHHHHHHhhHHhcCeeeeccccCceeeecceEEecchhhcccchHHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHH
Confidence            9999999999999999765        568889999999999999                                   


Q ss_pred             --------------------cchhhhhhhhhhhhhhhhcccccCCCcchhhHHHHhhcCc
Q 012241          342 --------------------DLRTMQGILNDGWNALARYYLNNFCDGTKQDAIDLLQGHY  381 (467)
Q Consensus       342 --------------------Gkrt~~G~l~D~~~S~~Ryy~NnF~Dg~rQdaidL~lG~~  381 (467)
                                          |+-+ .|+|+|+.+|++|.|+|||.|+.||+||||+||.+
T Consensus       445 lWs~NGd~iskiYTGtgAlk~s~t-rG~L~D~skS~~R~y~nnf~D~~kQeaIdlLLg~l  503 (1080)
T KOG0566|consen  445 LWSNNGDSLSKIYTGTGALKSSAT-RGKLKDASKSVTRTYQNNFMDKEKQEAIDLLLGRL  503 (1080)
T ss_pred             HHHhcchhhhhhhccccccccccc-ccchhhhhHHHHHHHhccccchhhHHHHHHHHhcC
Confidence                                2323 38999999999999999999999999999999977


No 6  
>PF02383 Syja_N:  SacI homology domain;  InterPro: IPR002013 Synaptic vesicles are recycled with remarkable speed and precision in nerve terminals. A major recycling pathway involves clathrin-mediated endocytosis at endocytic zones located around sites of release. Different 'accessory' proteins linked to this pathway have been shown to alter the shape and composition of lipid membranes, to modify membrane-coat protein interactions, and to influence actin polymerisation. These include the GTPase dynamin, the lysophosphatidic acid acyl transferase endophilin, and the phosphoinositide phosphatase synaptojanin [].  The recessive suppressor of secretory defect in yeast Golgi and yeast actin function belongs to this family. This protein may be involved in the coordination of the activities of the secretory pathway and the actin cytoskeleton. Human synaptojanin which may be localised on coated endocytic intermediates in nerve terminals also belongs to this family.; GO: 0042578 phosphoric ester hydrolase activity; PDB: 3LWT_X.
Probab=100.00  E-value=1.3e-86  Score=674.85  Aligned_cols=294  Identities=42%  Similarity=0.748  Sum_probs=211.9

Q ss_pred             EEEEeeeeeecccCceEEEEEEceeEeeeeC-CccEEEEEeEEEEeCCCCCCCCc------hhhhhhhHHHHHHHHhhhc
Q 012241            7 YYALIACLYVCMLLGSYLIVITERECVGSYL-GHPIYKVASLKILPCDHSLNNSS------AEQKKVEAEFSCLLKLAER   79 (467)
Q Consensus         7 i~GilG~i~~~l~~~~yLvvIt~~~~Vg~i~-g~~Iy~I~~~~~ipl~~~~~~~~------~~~~~~E~~~l~llk~~l~   79 (467)
                      |+||+|+|+  +.++.||+|||+++.||.++ +|+||+|+++++||+........      .++.++|.+++++|++++.
T Consensus         1 ~~GilG~i~--l~~~~yL~vIt~~~~v~~i~~~h~Iy~I~~v~~i~l~~~~~~~~~~~~~~~~~~~~e~~~~~~l~~~l~   78 (319)
T PF02383_consen    1 CFGILGIIR--LLSGPYLVVITESELVGTIPGGHDIYRITKVEFIPLPSSSSSSSLLNSEQSEQSRDEQRYLSLLKKLLS   78 (319)
T ss_dssp             --EEEEEEE--ETTEEEEEEEEEEEEEEEETT-EEEEEEEEEEEEES-TT---------------HHHHHHHHHHHHHHH
T ss_pred             CceEEEEEE--ECCCcEEEEEEecEEEEEeCCCcEEEEEeEEEEEEcCCCccccccccccccccchHHHHHHHHHHHHhc
Confidence            689999999  99999999999999999999 59999999999999988754433      3456788899999999999


Q ss_pred             CCceEEecCCCccchhhhhcccCCC-----CCCCccccCCCCcceechhhhHHHHhCC--CCCceeeeeeceeEeeEEee
Q 012241           80 TPGLYFSYDTNLTLSVQRLNTLGDE-----SKLLPLWRQAEPRFLWNNYLMEALIDNK--LDPFLLPVIQGSFHHFQTAI  152 (467)
Q Consensus        80 s~~fYFSy~~DLT~s~Q~~~~~~~~-----~~~~~~~~~~d~rF~WN~~l~~~l~~~~--~~~~~lpvI~Gfv~~~~~~~  152 (467)
                      +++|||||+||||+++|++......     ....++|+.+|++|+||++|+++|++.+  .+.|++|+|||||++..+.+
T Consensus        79 ~~~fYfS~~~DLT~slQ~~~~~~~~~~~~~~~~~~~~~~~~~~F~WN~~l~~~~~~~~~~~~~~~~~iiqG~v~~~~~~~  158 (319)
T PF02383_consen   79 SGSFYFSYTYDLTNSLQRQFENNSQSSTESSSSHSLWDRADDRFFWNRHLLKPFIEFGPDLDRWCLPIIQGFVESRQIEI  158 (319)
T ss_dssp             H---EE-SSS-TTS-HHHHHHH-S------------GGGS-TTT-TTTGGGHHHHHHHGGGGGG----BSSEEEEEEEEE
T ss_pred             CCCEEEECCCChhHhhcccccccccccccccccccccccCCCccCchHHHHHHHHhhCCCcccEEEEEEeeeEEEEEeee
Confidence            9999999999999999998654321     1234778899999999999999999887  88999999999999999999


Q ss_pred             c-CceEEEEEEeeeccCCCCcccccccCCCCCceeeeeeEeEEEE-e-C--CeEEEEEEeecCCCeeeeEccCCCcCcee
Q 012241          153 G-RDIIDVTLIARRCTRRNGTRMWRRGADSDGYVANFVETEQVVQ-M-N--GFMASFVQVRGSIPFLWEQTVDLTYKPKF  227 (467)
Q Consensus       153 ~-~~~~~~~LISRRS~~raGtRy~~RGiD~~G~vANfVETEqIv~-~-~--~~~~SfvQiRGSVPlfW~Q~~~l~~kP~i  227 (467)
                      + ++.++++||||||++||||||++||||++||||||||||||+. . +  +.++||||+||||||||+|.++++++|++
T Consensus       159 ~~~~~~~~~lIsRrS~~r~GtRy~~RGid~~G~vANfVEtEqiv~~~~~~~~~~~SfvqiRGSVPl~W~Q~~~~~~~p~i  238 (319)
T PF02383_consen  159 NSGKNFQLTLISRRSCRRAGTRYNRRGIDDDGNVANFVETEQIVYIYNNQSGHIFSFVQIRGSVPLFWSQPPNLKYKPPI  238 (319)
T ss_dssp             T-TEEEEEEEEEEE-----SSS--SSSB-TTS--S-EEEEEEEEEEE-T--EEEEEEEEEEE---SBS-----SSS----
T ss_pred             ecCceEEEEEEEeEeccccccccccccccccCccceeEEEEEEEEEcCCCCccEEEEeEecCCCCceeEcCCCCCCCCCe
Confidence            8 9999999999999999999999999999999999999999999 5 5  79999999999999999999999999999


Q ss_pred             eecC-CCccHHHHHHHHHHHHHhhCCcEEEeCccCCCchhhHHHHHHHHHhhc-----cCCCceeeechhhhhhcCcccc
Q 012241          228 EILR-AEEAPRVVERHFLDLRKKYGNVLAVDLVNKHGGEGRLCENFGNAMQNV-----ASDDIRYLHFDFHRICGHVHFE  301 (467)
Q Consensus       228 ~i~~-~~~~~~a~~kHF~~L~~~YG~v~~vNLl~~~g~E~~L~~ay~~~v~~l-----~~~~i~y~~fDfh~~ck~~~~~  301 (467)
                      .|.+ .+++.+||+|||++|.++||+|++||||+++++|+.|+++|+++++.+     +.++|+|++||||++||+|+||
T Consensus       239 ~i~~~~~~~~~af~kHf~~L~~~Y~~i~~VNLl~~~~~E~~L~~~y~~~~~~~~~~~~~~~~i~y~~fDfh~~~k~~~~~  318 (319)
T PF02383_consen  239 KISRSSEENQPAFKKHFDELLKRYGPIIIVNLLDKKGSEGKLSEAYEEAVKKLNQKSPNNDKIKYIWFDFHKECKNMKYE  318 (319)
T ss_dssp             ------HHHHHHHHHHHHHHHHHHSEEEEEEE---SS---HHHHHHHHHHHHH-------TTEEEEEE---SSTTTHHHH
T ss_pred             EEEeccchhHHHHHHHHHHHHHhcCceEEEEcccCCCCHHHHHHHHHHHHHHHhccccCcCCCcEEEeChhHHhcCCCCC
Confidence            9985 578899999999999999999999999999999999999999999998     5679999999999999999998


Q ss_pred             h
Q 012241          302 R  302 (467)
Q Consensus       302 ~  302 (467)
                      |
T Consensus       319 n  319 (319)
T PF02383_consen  319 N  319 (319)
T ss_dssp             -
T ss_pred             C
Confidence            6


No 7  
>PF15214 PXT1:  Peroxisomal testis-specific protein 1
Probab=51.18  E-value=3.9  Score=30.25  Aligned_cols=10  Identities=60%  Similarity=1.258  Sum_probs=8.4

Q ss_pred             Ccceechhhh
Q 012241          116 PRFLWNNYLM  125 (467)
Q Consensus       116 ~rF~WN~~l~  125 (467)
                      -||+||.||+
T Consensus        42 LrFfwnnhll   51 (51)
T PF15214_consen   42 LRFFWNNHLL   51 (51)
T ss_pred             hhhhhhcccC
Confidence            4899999875


No 8  
>KOG0566 consensus Inositol-1,4,5-triphosphate 5-phosphatase (synaptojanin), INP51/INP52/INP53 family [Intracellular trafficking, secretion, and vesicular transport]
Probab=35.84  E-value=38  Score=39.61  Aligned_cols=37  Identities=22%  Similarity=0.282  Sum_probs=33.6

Q ss_pred             CceEEEEEEceeEeeeeCCccEEEEEeE--EEEeCCCCC
Q 012241           20 LGSYLIVITERECVGSYLGHPIYKVASL--KILPCDHSL   56 (467)
Q Consensus        20 ~~~yLvvIt~~~~Vg~i~g~~Iy~I~~~--~~ipl~~~~   56 (467)
                      +-.+++.||+++.||+|.+-+||+|++.  +|+++..+.
T Consensus        80 g~~~l~~V~~~~sv~ki~~vdf~~l~~~~~dFi~l~~~~  118 (1080)
T KOG0566|consen   80 GVSFLAQVTGSESVGKIEDVDFYSLTNTVWDFISLERSS  118 (1080)
T ss_pred             cceEEEEecCCceeccccceeEEEeccchhhheecccCC
Confidence            3469999999999999999999999999  999998753


No 9  
>PHA02762 hypothetical protein; Provisional
Probab=26.96  E-value=76  Score=24.21  Aligned_cols=35  Identities=17%  Similarity=0.323  Sum_probs=25.8

Q ss_pred             ecCceEEEEEEeeeccCC--CCcccccccCCCCCcee
Q 012241          152 IGRDIIDVTLIARRCTRR--NGTRMWRRGADSDGYVA  186 (467)
Q Consensus       152 ~~~~~~~~~LISRRS~~r--aGtRy~~RGiD~~G~vA  186 (467)
                      +.++-=.+.++-.||...  -|--|-.=|||++|+.|
T Consensus         5 idn~fgnlii~~~rs~~ks~eg~afvtigide~g~ia   41 (62)
T PHA02762          5 IDNDFGNLIIEFKRNVEKSFEGEAFVTIGIDENDKIS   41 (62)
T ss_pred             ecCCCccEEEEEecCccccccccEEEEEeECCCCcEE
Confidence            344444566666777654  58899999999999988


No 10 
>TIGR03237 dnd_assoc_2 dnd system-associated protein 2. cereus E33L, Hahella chejuensis KCTC 2396, and Pseudoalteromonas haloplanktis TAC12.
Probab=24.13  E-value=1.4e+02  Score=36.22  Aligned_cols=44  Identities=18%  Similarity=0.259  Sum_probs=31.9

Q ss_pred             HHHHHHHHHHHHHhhCC-cEEEeCccCCCchhh---HHHHHHHHHhhc
Q 012241          236 PRVVERHFLDLRKKYGN-VLAVDLVNKHGGEGR---LCENFGNAMQNV  279 (467)
Q Consensus       236 ~~a~~kHF~~L~~~YG~-v~~vNLl~~~g~E~~---L~~ay~~~v~~l  279 (467)
                      ...|..||+.|....++ .+.||+||....+..   |-+-|++.++.+
T Consensus       721 i~eF~~~F~~LF~~~s~apl~IN~IN~~~~kElf~Giv~y~k~~~~~~  768 (1256)
T TIGR03237       721 IQQFTGHFGYLFSEYSRAPLQINSVNNENNHETFRGLVNYMLERIEGL  768 (1256)
T ss_pred             HHHHHHHHHHHhccCCCCcEEEEEecccchHHHHHHHHHHHHHhhccc
Confidence            45589999999999987 689999998754443   345566655443


No 11 
>COG1867 TRM1 N2,N2-dimethylguanosine tRNA methyltransferase [Translation, ribosomal structure and biogenesis]
Probab=20.61  E-value=64  Score=34.06  Aligned_cols=47  Identities=23%  Similarity=0.431  Sum_probs=30.6

Q ss_pred             CceeeechhhhhhcCcccchHHHHHHHHHHHHHhcCeEE----ecCCCceEeec
Q 012241          283 DIRYLHFDFHRICGHVHFERLSILFEQIEDFLEKNGYLL----LNEKDNVDLVC  332 (467)
Q Consensus       283 ~i~y~~fDfh~~ck~~~~~~l~~L~~~l~~~l~~~g~f~----~~~~g~iRtNC  332 (467)
                      ++.-..||.|+.|+..+...-  =++.+-+.|.+.||-.    ..++| +|||+
T Consensus       314 ~~~p~fydl~~ias~l~~s~p--~~~~vv~~L~~~G~~asrTHf~p~g-iKTda  364 (380)
T COG1867         314 DISPLFYDLHRIASKLGLSAP--PLEEVVEALRSAGYEASRTHFSPTG-IKTDA  364 (380)
T ss_pred             CCCceEEEHHHHHHHhCCCCC--CHHHHHHHHHhcCceeeeeccCCcc-cccCC
Confidence            444788999999987665531  1234556678899864    34555 57765


Done!