Query 012241
Match_columns 467
No_of_seqs 259 out of 809
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 05:33:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012241.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012241hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3lwt_X Phosphoinositide phosph 100.0 1E-115 4E-120 930.8 27.8 365 3-380 52-505 (505)
2 1ta3_B Endo-1,4-beta-xylanase; 29.1 31 0.0011 33.6 3.2 82 206-293 78-175 (303)
3 3cui_A EXO-beta-1,4-glucanase; 23.8 52 0.0018 31.9 3.6 60 233-294 98-174 (315)
4 3emz_A Xylanase, endo-1,4-beta 20.9 99 0.0034 30.5 5.0 87 206-294 76-181 (331)
5 1w32_A Endo-1,4-beta-xylanase 19.7 2E+02 0.0069 28.3 7.1 80 207-294 77-185 (348)
6 4f8x_A Endo-1,4-beta-xylanase; 19.1 48 0.0016 32.9 2.2 63 233-295 104-185 (335)
7 1i1w_A Endo-1,4-beta-xylanase; 17.9 66 0.0023 31.1 2.9 56 235-292 104-175 (303)
8 1nq6_A XYS1; glycoside hydrola 16.8 1.4E+02 0.0049 28.5 5.1 49 207-260 77-126 (302)
9 3u7b_A Endo-1,4-beta-xylanase; 14.8 98 0.0034 30.5 3.3 60 234-295 103-178 (327)
10 1v0l_A Endo-1,4-beta-xylanase 14.5 1E+02 0.0035 30.0 3.3 80 207-294 78-175 (313)
No 1
>3lwt_X Phosphoinositide phosphatase SAC1; SAC3/FIG4, lipid metabol endoplasmic reticulum, hydrolase, membrane, transmembrane; 1.96A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-115 Score=930.83 Aligned_cols=365 Identities=34% Similarity=0.593 Sum_probs=304.7
Q ss_pred ccceEEEEeeeeeecccCceEEEEEEceeEeeeeCCccEEEEEeEEEEeCCCCCCCCchhhhhhhHHHHHHHHhhhcCCc
Q 012241 3 KCNYYYALIACLYVCMLLGSYLIVITERECVGSYLGHPIYKVASLKILPCDHSLNNSSAEQKKVEAEFSCLLKLAERTPG 82 (467)
Q Consensus 3 ~~~~i~GilG~i~~~l~~~~yLvvIt~~~~Vg~i~g~~Iy~I~~~~~ipl~~~~~~~~~~~~~~E~~~l~llk~~l~s~~ 82 (467)
++++|+||+|+|+ +.++.||+|||+++.||.|+||.||+|+++++||++.+. .+.++|.+|+++|+.++++++
T Consensus 52 ~~~~i~GilG~i~--l~~~~YlivIT~~~~vg~i~gh~Iy~I~~~~~ipl~~~~-----~~~~~E~~yl~ll~~~l~s~~ 124 (505)
T 3lwt_X 52 EVVKIASLMGFIK--LKLNRYAIIANTVEETGRFNGHVFYRVLQHSIVSTKFNS-----RIDSEEAEYIKLLELHLKNST 124 (505)
T ss_dssp CCEEESEEEEEEE--ETTEEEEEEEEEEEEEEEETTEEEEEEEEEEEEESCTTC-----CCCHHHHHHHHHHHHHHHHCC
T ss_pred ceeEEEEEEEEEE--ECCCcEEEEEEccEEEEEECCeEEEEEEEEEEEEecCcc-----ccChhHHHHHHHHHHHhcCCC
Confidence 4789999999999 999999999999999999999999999999999998642 345789999999999999999
Q ss_pred eEEecCCCccchhhhhcccCCCCCCCccccCCCCcceechhhhHHHHhCC-----CCCceeeeeeceeEeeEEeecCceE
Q 012241 83 LYFSYDTNLTLSVQRLNTLGDESKLLPLWRQAEPRFLWNNYLMEALIDNK-----LDPFLLPVIQGSFHHFQTAIGRDII 157 (467)
Q Consensus 83 fYFSy~~DLT~s~Q~~~~~~~~~~~~~~~~~~d~rF~WN~~l~~~l~~~~-----~~~~~lpvI~Gfv~~~~~~~~~~~~ 157 (467)
|||||+||||+++|++..... .+.|+.+|++|+||++|+++|++.. .+.|++|+||||+++..+.++++++
T Consensus 125 FYfS~~yDLT~slQ~~~~~~~----~~~~~~~d~~F~WN~~l~~~l~~~~~~~~~~~~~~~piI~Gfv~~~~~~~~~~~~ 200 (505)
T 3lwt_X 125 FYFSYTYDLTNSLQRNEKVGP----AASWKTADERFFWNHYLTEDLRNFAHQDPRIDSFIQPVIYGYAKTVDAVLNATPI 200 (505)
T ss_dssp CEECSSSCTTSCHHHHHHHCS----CCCGGGSCTTTCTTTGGGHHHHHHHTTCGGGGGGCCCCBSSEEEEEEEEETTEEE
T ss_pred EEEeCCcCCCcchhhccccCc----cccccCCCCceechHHHHHHHHHhcccCcchhhhhhHhhcCceEEEEEEECCceE
Confidence 999999999999999876532 3789999999999999999998753 3579999999999999999999999
Q ss_pred EEEEEeeeccCCCCcccccccCCCCCceeeeeeEeEEEEeCC------eEEEEEEeecCCCeeeeEccCCCcCceeeecC
Q 012241 158 DVTLIARRCTRRNGTRMWRRGADSDGYVANFVETEQVVQMNG------FMASFVQVRGSIPFLWEQTVDLTYKPKFEILR 231 (467)
Q Consensus 158 ~~~LISRRS~~raGtRy~~RGiD~~G~vANfVETEqIv~~~~------~~~SfvQiRGSVPlfW~Q~~~l~~kP~i~i~~ 231 (467)
.++||||||++||||||++||||++||||||||||||+..++ .++||||+||||||||+|.++++|||+|++.
T Consensus 201 ~~tLISRRS~~raGtRy~~RGidd~G~VANfVETEqIv~~~~~~~~~~~~~SfvQiRGSVPlfW~Q~~~l~~kP~i~i~- 279 (505)
T 3lwt_X 201 VLGLITRRSIFRAGTRYFRRGVDKDGNVGNFNETEQILLAENPESEKIHVFSFLQTRGSVPIYWAEINNLKYKPNLVLG- 279 (505)
T ss_dssp EEEEEEEECCCCCSSSCCSSSBCTTSCCSCEEEEEEEEEEECTTTCCEEEEEEEEEEECCCSBSCCCCCSSSCCCCCCC-
T ss_pred EEEEEEEEecccCCccccccCcCCCCCccceeeEEEEEEeCCCCCCCccEEEEEEeccccCceeeecCCcCcCCCeeec-
Confidence 999999999999999999999999999999999999999987 8999999999999999999999999999985
Q ss_pred CCccHHHHHHHHHHHHHhhCCcEEEeCccCCCchhhHHHHHHHHHhhccCCCceeeechhhhhhcCcccchHHHHHHHHH
Q 012241 232 AEEAPRVVERHFLDLRKKYGNVLAVDLVNKHGGEGRLCENFGNAMQNVASDDIRYLHFDFHRICGHVHFERLSILFEQIE 311 (467)
Q Consensus 232 ~~~~~~a~~kHF~~L~~~YG~v~~vNLl~~~g~E~~L~~ay~~~v~~l~~~~i~y~~fDfh~~ck~~~~~~l~~L~~~l~ 311 (467)
+++++||++||++|.++||++++||||++|++|.+|+++|+++|+.+++++|+|++||||++||+|+|++++.|+++++
T Consensus 280 -~~~~~a~~kHF~~L~~~YG~~~iVNLl~~k~~E~~L~~~y~~~v~~l~~~~i~y~~fDfh~~~k~~~~~~v~~ll~~l~ 358 (505)
T 3lwt_X 280 -ENSLDATKKHFDQQKELYGDNYLVNLVNQKGHELPVKEGYESVVHALNDPKIHYVYFDFHHECRKMQWHRVKLLIDHLE 358 (505)
T ss_dssp -HHHHHHHHHHHHHHHHHHSEEEEEEECCCSSCCCHHHHHHHHHHHHHCCTTEEEEEECCCSSTTTHHHHHHHHHHHHHH
T ss_pred -CchHHHHHHHHHHHHHHhCCcEEEecccCCCchhHHHHHHHHHHHHhcccCCceEEecchHhhhccchhHHHHHHHHHH
Confidence 3489999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HH-HHhcCeEEec-------------CCCceEeecccccccccc------------------------------------
Q 012241 312 DF-LEKNGYLLLN-------------EKDNVDLVCVPVCCRDNV------------------------------------ 341 (467)
Q Consensus 312 ~~-l~~~g~f~~~-------------~~g~iRtNCiDCLDRTNv------------------------------------ 341 (467)
+. ++++|||+.+ |+|++|||||||||||||
T Consensus 359 ~~~~~~~g~f~~~~~~~g~~~~~~~~Q~GV~RtNCiDCLDRTNvvQ~~i~~~~L~~qL~~lgi~~~~~~~~~~~~~~~~f 438 (505)
T 3lwt_X 359 KLGLSNEDFFHKVIDSNGNTVEIVNEQHSVVRTNCMDCLDRTNVVQSVLAQWVLQKEFESADVVATGSTWEDNAPLLTSY 438 (505)
T ss_dssp HHTCCTTCSEEEEECTTSCEEEEEECCCEEEEEETTSCHHHHHHHHHHHHHHHHHHHHHHTTSSCTTCCGGGCHHHHHHH
T ss_pred HhcccccCceEeeccCCCCccceeeccceEEEEecccccccchHHHHHHHHHHHHHHHHHcCCCCCccccccCHHHHHHH
Confidence 85 7889999751 678889999999999999
Q ss_pred ----------------------------cchhhhhhhhhhhhhhhhcccccCCCcchhhHHHHhhcC
Q 012241 342 ----------------------------DLRTMQGILNDGWNALARYYLNNFCDGTKQDAIDLLQGH 380 (467)
Q Consensus 342 ----------------------------Gkrt~~G~l~D~~~S~~Ryy~NnF~Dg~rQdaidL~lG~ 380 (467)
|||++.|+++|+++|++|||+|||.|+.||||||||||+
T Consensus 439 ~~lWadnGD~iS~qYaGT~Alkt~~tR~gk~~~~g~l~D~~~S~~Ryy~NnF~D~~rQ~aidl~LGn 505 (505)
T 3lwt_X 439 QNLWADNADAVSVAYSGTGALKTDFTRTGKRTRLGAFNDFLNSASRYYQNNWTDGPRQDSYDLFLGG 505 (505)
T ss_dssp HHHHHHHHHHHTTTCCCCC------------------------------------------------
T ss_pred HHHHHHhhHHHHHHhcCCccccCceeeceeechhhhHHHHHHhHhheeecccCcHHHHHHHHHHcCC
Confidence 999999999999999999999999999999999999996
No 2
>1ta3_B Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), beta alpha barrel (xylanase), HYD inhibitor-hydrolase complex; HET: NAG; 1.70A {Emericella nidulans} SCOP: c.1.8.3
Probab=29.11 E-value=31 Score=33.57 Aligned_cols=82 Identities=22% Similarity=0.293 Sum_probs=45.5
Q ss_pred EeecCCCeeeeEccCCCcCceeeecCCCccHHHHHHHHHHHHHhhCC-cEEEeCccC----CC-----------chhhHH
Q 012241 206 QVRGSIPFLWEQTVDLTYKPKFEILRAEEAPRVVERHFLDLRKKYGN-VLAVDLVNK----HG-----------GEGRLC 269 (467)
Q Consensus 206 QiRGSVPlfW~Q~~~l~~kP~i~i~~~~~~~~a~~kHF~~L~~~YG~-v~~vNLl~~----~g-----------~E~~L~ 269 (467)
.+||-.++.=+|.|..-..+. ..+.-..++++|...+.++|+. +..-+.+|+ .| .+.-+.
T Consensus 78 ~v~ghtlvW~~q~P~W~~~~~----~~~~~~~~~~~~i~~v~~rY~g~v~~Wdv~NE~~~~~g~~r~s~~~~~~G~~~i~ 153 (303)
T 1ta3_B 78 KVRGHTLVWHSQLPSWVSSIG----DANTLRSVMTNHINEVVGRYKGKIMHWDVVNEIFNEDGTFRNSVFYNLLGEDFVR 153 (303)
T ss_dssp EEEEEEEECSSSCCHHHHTCC----CHHHHHHHHHHHHHHHHHHTTTSCSEEEEEESCBCTTSSBCCCHHHHHHTTHHHH
T ss_pred EEEEeeccccCCCChhhhcCC----CHHHHHHHHHHHHHHHHHhcCCcceEEEeecCcccCCCCcccchHHHhccHHHHH
Confidence 378877773245443221110 1123368899999999999975 554444432 11 133455
Q ss_pred HHHHHHHhhccCCCceeeechhhh
Q 012241 270 ENFGNAMQNVASDDIRYLHFDFHR 293 (467)
Q Consensus 270 ~ay~~~v~~l~~~~i~y~~fDfh~ 293 (467)
.+|+.+=+. +|+.+...=||+-
T Consensus 154 ~af~~Ar~~--dP~a~L~~Ndyn~ 175 (303)
T 1ta3_B 154 IAFETARAA--DPDAKLYINDYNL 175 (303)
T ss_dssp HHHHHHHHH--CTTSEEEEEESCC
T ss_pred HHHHHHHHH--CCCCEEEeccccc
Confidence 666655433 4566666567763
No 3
>3cui_A EXO-beta-1,4-glucanase; CEX, xylanase, isofagomine inhibitor, TIM barrel, cellulose degradation, glycosidase, hydrolase; HET: X4S; 1.50A {Cellulomonas fimi} PDB: 3cug_A* 3cuh_A* 3cuf_A* 3cuj_A* 1fh9_A* 1fh7_A 1fh8_A 1exp_A* 1fhd_A* 1j01_A* 2exo_A 2xyl_A 2his_A*
Probab=23.79 E-value=52 Score=31.92 Aligned_cols=60 Identities=18% Similarity=0.277 Sum_probs=35.6
Q ss_pred CccHHHHHHHHHHHHHhhCC-cEEEeCccC----C-C-----------chhhHHHHHHHHHhhccCCCceeeechhhhh
Q 012241 233 EEAPRVVERHFLDLRKKYGN-VLAVDLVNK----H-G-----------GEGRLCENFGNAMQNVASDDIRYLHFDFHRI 294 (467)
Q Consensus 233 ~~~~~a~~kHF~~L~~~YG~-v~~vNLl~~----~-g-----------~E~~L~~ay~~~v~~l~~~~i~y~~fDfh~~ 294 (467)
+....++++|...+.++|+. |.....+|+ . | .+.-+..+|+.+=+ . +|+.+...=||.-+
T Consensus 98 ~~~~~~~~~~i~~v~~ry~g~v~~WdV~NE~~~~~~g~~r~~~~~~~~g~~~i~~af~~Ar~-~-dP~a~l~~ndy~~~ 174 (315)
T 3cui_A 98 SAFESAMVNHVTKVADHFEGKVASWDVVNEAFADGGGRRQDSAFQQKLGNGYIETAFRAARA-A-DPTAKLCINDYNVE 174 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCCEEEEEECCBCTTSSBCSSCHHHHHHCTTHHHHHHHHHHH-H-CSSSEEEEEESSCS
T ss_pred HHHHHHHHHHHHHHHHHcCCceEEEEeecccccCCCCccccchHHHhccHHHHHHHHHHHHh-h-CCCCEEEECCcccc
Confidence 34568899999999999975 554444443 1 1 13455666665433 2 34555444466543
No 4
>3emz_A Xylanase, endo-1,4-beta-xylanase; (alpha/beta)8 barrel, GH10 enzyme complex, hydrolase; HET: HXH; 2.08A {Bacillus SP} SCOP: c.1.8.3 PDB: 3emq_A* 3emc_A*
Probab=20.90 E-value=99 Score=30.53 Aligned_cols=87 Identities=17% Similarity=0.229 Sum_probs=49.6
Q ss_pred EeecCCCeeeeEccCCCcC-ceeeecCCCccHHHHHHHHHHHHHhhCC-cE---EEeCc-cCCC-------------chh
Q 012241 206 QVRGSIPFLWEQTVDLTYK-PKFEILRAEEAPRVVERHFLDLRKKYGN-VL---AVDLV-NKHG-------------GEG 266 (467)
Q Consensus 206 QiRGSVPlfW~Q~~~l~~k-P~i~i~~~~~~~~a~~kHF~~L~~~YG~-v~---~vNLl-~~~g-------------~E~ 266 (467)
.+||-..+.=+|.|..-.+ +.=.....++-..++++|+..+..+|+. +. +||=. +..| +|.
T Consensus 76 ~vrgHtLvWh~q~P~W~~~~~~g~~~~~~~l~~~~~~~I~~v~~rYkg~i~~WDVvNE~~~~~~~~~~r~s~~~~~lG~~ 155 (331)
T 3emz_A 76 GVRGHTLVWHNQTPAWMFEDASGGTASREMMLSRLKQHIDTVVGRYKDQIYAWDVVNEAIEDKTDLIMRDTKWLRLLGED 155 (331)
T ss_dssp EEEECCSBCSSSCCGGGGBCTTSSBCCHHHHHHHHHHHHHHHHHHTTTTCSEEEEEECCBCSSTTCCBCCCHHHHHTCTT
T ss_pred EEeeeeeeccccCcHhHhccccCCCCCHHHHHHHHHHHHHHHHHHhCCCceEEEEeccccCCCCCccccCCchhhhcCHH
Confidence 4688866544565543221 0000011123467899999999999976 55 55532 1111 244
Q ss_pred hHHHHHHHHHhhccCCCceeeechhhhh
Q 012241 267 RLCENFGNAMQNVASDDIRYLHFDFHRI 294 (467)
Q Consensus 267 ~L~~ay~~~v~~l~~~~i~y~~fDfh~~ 294 (467)
-+..||+.+-+. +|+.+...=||.-+
T Consensus 156 ~i~~aF~~Ar~a--dP~a~L~~NDyn~~ 181 (331)
T 3emz_A 156 YLVQAFNMAHEA--DPNALLFYNDYNET 181 (331)
T ss_dssp HHHHHHHHHHHH--CTTSEEEEEESSCS
T ss_pred HHHHHHHHHHhh--CCCceEEecccccc
Confidence 567777776554 45666666677754
No 5
>1w32_A Endo-1,4-beta-xylanase A precursor; mutant, calcium ION, thermostable, glycosyle hydrolase, family 10, error prone PCR, hydrolase; 1.2A {Cellvibrio japonicus} SCOP: c.1.8.3 PDB: 1w2p_A 1w2v_A 1w3h_A 1clx_A 1e5n_A* 1xys_A
Probab=19.73 E-value=2e+02 Score=28.31 Aligned_cols=80 Identities=18% Similarity=0.186 Sum_probs=47.3
Q ss_pred eecCCCeeee--EccCCCcCceeeecCCCccHHHHHHHHHHHHHhhCC-cE---EEeC-ccCC-----C-----------
Q 012241 207 VRGSIPFLWE--QTVDLTYKPKFEILRAEEAPRVVERHFLDLRKKYGN-VL---AVDL-VNKH-----G----------- 263 (467)
Q Consensus 207 iRGSVPlfW~--Q~~~l~~kP~i~i~~~~~~~~a~~kHF~~L~~~YG~-v~---~vNL-l~~~-----g----------- 263 (467)
+||-.|+.-+ |.|..-..+ ......++++|...+.++|+. |. ++|= ++.. |
T Consensus 77 v~ghtl~W~~~~q~P~W~~~~------~~~~~~~~~~~i~~v~~rY~g~i~~wdv~NE~~~~~~~~~~g~~~~~~~r~s~ 150 (348)
T 1w32_A 77 VHGHALVWHPSYQLPNWASDS------NANFRQDFARHIDTVAAHFAGQVKSWDVVNEALFDSADDPDGRGSANGYRQSV 150 (348)
T ss_dssp EEEEEEECCCGGGCCTTCSTT------CTTHHHHHHHHHHHHHHHTTTTCSEEEEEECCBCCGGGCTTCCCEETTEECCH
T ss_pred EEEEeeecCccccCchhhhcC------CHHHHHHHHHHHHHHHHHhCCceeEEEeecccccCCccccCCcccccccccch
Confidence 6887766323 555432211 123578899999999999986 54 5552 2212 2
Q ss_pred ------chhhHHHHHHHHHhhccCCCceeeechhhhh
Q 012241 264 ------GEGRLCENFGNAMQNVASDDIRYLHFDFHRI 294 (467)
Q Consensus 264 ------~E~~L~~ay~~~v~~l~~~~i~y~~fDfh~~ 294 (467)
.+.-+.+||+.+=+. +|+.+...=||.-+
T Consensus 151 ~~~~lgG~~~i~~aF~~Ar~a--dP~a~L~~NDyn~~ 185 (348)
T 1w32_A 151 FYRQFGGPEYIDEAFRRARAA--DPTAELYYNDFNTE 185 (348)
T ss_dssp HHHHHTSTHHHHHHHHHHHHH--CTTSEEEEEESSTT
T ss_pred HHHhcCchHHHHHHHHHHHHh--CCCCEEEecccccc
Confidence 344566777766543 45666555577654
No 6
>4f8x_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA; 1.47A {Penicillium canescens}
Probab=19.10 E-value=48 Score=32.94 Aligned_cols=63 Identities=19% Similarity=0.336 Sum_probs=41.0
Q ss_pred CccHHHHHHHHHHHHHhhCC-cE---EEeCccC-CC-----------chhhHHHHHHHHHhhc---cCCCceeeechhhh
Q 012241 233 EEAPRVVERHFLDLRKKYGN-VL---AVDLVNK-HG-----------GEGRLCENFGNAMQNV---ASDDIRYLHFDFHR 293 (467)
Q Consensus 233 ~~~~~a~~kHF~~L~~~YG~-v~---~vNLl~~-~g-----------~E~~L~~ay~~~v~~l---~~~~i~y~~fDfh~ 293 (467)
++...++++|+.....+|+. +. +||=.-. .| +|.-+..||+.+-+.+ .+|+.+...=||.-
T Consensus 104 ~~l~~~~~~~I~~v~~rY~g~i~~WDVvNE~~~~~g~~r~s~~~~~lG~~~i~~aF~~Ar~a~~~~~dP~a~L~~NDYn~ 183 (335)
T 4f8x_A 104 KELTAVMKNHIFKTVQHFGRRCYSWDVVNEALNGDGTFSSSVWYDTIGEEYFYLAFKYAQEALAQIGANDVKLYYNDYGI 183 (335)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGCSEEEEEESCBCTTSSBCCCHHHHHHCTHHHHHHHHHHHHHHHHTTCTTSEEEEEESSC
T ss_pred HHHHHHHHHHHHHHHHHhCCCceEEEEecCccCCCCccccCchhhhcCHHHHHHHHHHHHHhccccCCCCcEEEEecccc
Confidence 34568899999999999976 55 4553211 11 2445667777765542 25677777778875
Q ss_pred hh
Q 012241 294 IC 295 (467)
Q Consensus 294 ~c 295 (467)
+.
T Consensus 184 e~ 185 (335)
T 4f8x_A 184 EN 185 (335)
T ss_dssp SS
T ss_pred cC
Confidence 53
No 7
>1i1w_A Endo-1,4-beta-xylanase; xylan degradation, hydrolase, glycosidase, enzyme, ultra HIG resolution, cryo temperature, 1; HET: PCA; 0.89A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1i1x_A* 2bnj_A* 1gok_A 1gom_A 1goo_A 1goq_A* 1gor_A* 1k6a_A 3o2l_A 3nyd_A* 1tux_A 1b31_A 1b30_A 1b3v_A* 1b3w_A* 1b3x_A* 1b3y_A* 1b3z_A* 1bg4_A
Probab=17.92 E-value=66 Score=31.13 Aligned_cols=56 Identities=25% Similarity=0.397 Sum_probs=34.7
Q ss_pred cHHHHHHHHHHHHHhhCC-cEEEeCccCC----C-----------chhhHHHHHHHHHhhccCCCceeeechhh
Q 012241 235 APRVVERHFLDLRKKYGN-VLAVDLVNKH----G-----------GEGRLCENFGNAMQNVASDDIRYLHFDFH 292 (467)
Q Consensus 235 ~~~a~~kHF~~L~~~YG~-v~~vNLl~~~----g-----------~E~~L~~ay~~~v~~l~~~~i~y~~fDfh 292 (467)
-..++++|...+.++|+. +...+.+|+- | .+.-+..+|+.+=+. +|+.+...=||.
T Consensus 104 ~~~~~~~~i~~v~~ry~g~v~~WdV~NE~~~~~g~~r~s~~~~~~g~~~i~~af~~Ar~~--dP~a~L~~Ndyn 175 (303)
T 1i1w_A 104 LTNVMKNHITTLMTRYKGKIRAWDVVNEAFNEDGSLRQTVFLNVIGEDYIPIAFQTARAA--DPNAKLYINDYN 175 (303)
T ss_dssp HHHHHHHHHHHHHHHTTTSCSEEEEEESCBCTTSSBCCCHHHHHTCTTHHHHHHHHHHHH--CTTSEEEEEESS
T ss_pred HHHHHHHHHHHHHHhcCCceeEEEeecCccCCCCCcccchHHHhcCHHHHHHHHHHHHHH--CCCCeEEecccc
Confidence 368899999999999975 5444444321 1 134567777766443 355555544665
No 8
>1nq6_A XYS1; glycoside hydrolase family 10, xylanase, xylan degradation,, hydrolase; 1.78A {Streptomyces halstedii} SCOP: c.1.8.3
Probab=16.82 E-value=1.4e+02 Score=28.48 Aligned_cols=49 Identities=22% Similarity=0.361 Sum_probs=29.2
Q ss_pred eecCCCeeeeEccCCCcCceeeecCCCccHHHHHHHHHHHHHhhCC-cEEEeCcc
Q 012241 207 VRGSIPFLWEQTVDLTYKPKFEILRAEEAPRVVERHFLDLRKKYGN-VLAVDLVN 260 (467)
Q Consensus 207 iRGSVPlfW~Q~~~l~~kP~i~i~~~~~~~~a~~kHF~~L~~~YG~-v~~vNLl~ 260 (467)
+||-+++.=+|.|..- +. + ..+....++++|...+.++|+. +.....+|
T Consensus 77 v~gh~lvW~~~~P~W~-~~---~-~~~~~~~~~~~~i~~v~~ry~g~v~~WdV~N 126 (302)
T 1nq6_A 77 VRGHTLVWHSQLPGWV-SP---L-AATDLRSAMNNHITQVMTHYKGKIHSWDVVN 126 (302)
T ss_dssp EEEEEEEESTTCCTTT-TT---S-CHHHHHHHHHHHHHHHHHHTTTSCSEEEEEE
T ss_pred EEEEecccCCCCChhh-hc---C-CHHHHHHHHHHHHHHHHHHcCCceEEEEeec
Confidence 4666655225555432 10 1 1234578899999999999975 54444433
No 9
>3u7b_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA MAN; 1.94A {Fusarium oxysporum}
Probab=14.77 E-value=98 Score=30.46 Aligned_cols=60 Identities=20% Similarity=0.274 Sum_probs=38.7
Q ss_pred ccHHHHHHHHHHHHHhhCC-cEEEeCccC----CC-----------chhhHHHHHHHHHhhccCCCceeeechhhhhh
Q 012241 234 EAPRVVERHFLDLRKKYGN-VLAVDLVNK----HG-----------GEGRLCENFGNAMQNVASDDIRYLHFDFHRIC 295 (467)
Q Consensus 234 ~~~~a~~kHF~~L~~~YG~-v~~vNLl~~----~g-----------~E~~L~~ay~~~v~~l~~~~i~y~~fDfh~~c 295 (467)
+...++++|+..+..+|+. +..-+.+|+ .| .|.-+..||+.+=+. +|+.+...=||.-+.
T Consensus 103 ~l~~~~~~~I~~v~~rY~g~i~~WDVvNE~~~~~g~~r~~~~~~~~G~~~i~~af~~Ar~~--dP~a~L~~Ndyn~e~ 178 (327)
T 3u7b_A 103 TLQAVMRDHINAVMGRYRGKCTHWDVVNEALNEDGTYRDSVFLRVIGEAYIPIAFRMALAA--DPTTKLYYNDYNLEY 178 (327)
T ss_dssp HHHHHHHHHHHHHHHHTTTTCSEEEEEECCBCTTSSBCCCHHHHHHCTTHHHHHHHHHHHH--CTTSEEEEEESSCTT
T ss_pred HHHHHHHHHHHHHHHHhCCCceEEEEeccccCCCCCccccchhhhccHHHHHHHHHHHHhH--CCCCeEEeccccccC
Confidence 3467899999999999976 654444433 11 244566777766543 456666666777554
No 10
>1v0l_A Endo-1,4-beta-xylanase A; glycoside hydrolase family 10, xylan degradation, isofagomine, hydrolase; 0.98A {Streptomyces lividans} SCOP: c.1.8.3 PDB: 1e0x_A 1e0w_A* 1od8_A 1v0k_A 1v0m_A 1v0n_A 1e0v_A* 1xas_A 2g3i_A 2g3j_A* 2g4f_A 1v6y_A
Probab=14.45 E-value=1e+02 Score=30.00 Aligned_cols=80 Identities=18% Similarity=0.264 Sum_probs=45.9
Q ss_pred eecCCCeeee-EccCCCcCceeeecCCCccHHHHHHHHHHHHHhhCC-cEEEeCccC----CC------------chhhH
Q 012241 207 VRGSIPFLWE-QTVDLTYKPKFEILRAEEAPRVVERHFLDLRKKYGN-VLAVDLVNK----HG------------GEGRL 268 (467)
Q Consensus 207 iRGSVPlfW~-Q~~~l~~kP~i~i~~~~~~~~a~~kHF~~L~~~YG~-v~~vNLl~~----~g------------~E~~L 268 (467)
+||-.++ |. |.|..... + ..+.-..++++|+..+.++|+. +...+.+|+ .+ .+.-+
T Consensus 78 v~ghtlv-W~~q~P~W~~~----~-~~~~~~~~~~~~i~~v~~ry~g~i~~wdv~NE~~~~~g~~~~~~~~~~~~G~~~i 151 (313)
T 1v0l_A 78 VRGHTLA-WHSQQPGWMQS----L-SGSALRQAMIDHINGVMAHYKGKIVQWDVVNEAFADGSSGARRDSNLQRSGNDWI 151 (313)
T ss_dssp EEEEEEE-CSSSCCHHHHT----C-CHHHHHHHHHHHHHHHHHHTTTTCSEEEEEECCBCSSSSCCBCCSHHHHTCTTHH
T ss_pred EEEEeec-CcCcCchhhhc----C-CHHHHHHHHHHHHHHHHHHcCCcceEEeeecccccCCCcccccCcHHHhhhHHHH
Confidence 6776664 64 43321111 1 1234467899999999999975 543333331 11 14567
Q ss_pred HHHHHHHHhhccCCCceeeechhhhh
Q 012241 269 CENFGNAMQNVASDDIRYLHFDFHRI 294 (467)
Q Consensus 269 ~~ay~~~v~~l~~~~i~y~~fDfh~~ 294 (467)
..+|+.+=+. +|+.+...=||+-+
T Consensus 152 ~~af~~Ar~~--dP~a~L~~Ndyn~~ 175 (313)
T 1v0l_A 152 EVAFRTARAA--DPSAKLCYNDYNVE 175 (313)
T ss_dssp HHHHHHHHHH--CTTSEEEEEESSCC
T ss_pred HHHHHHHHhh--CCCCEEEEeccccc
Confidence 7788776543 45666555577644
Done!