Query 012242
Match_columns 467
No_of_seqs 141 out of 1229
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 05:34:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012242.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012242hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g22_A Hydroxycinnamoyl-COA sh 100.0 5E-81 1.7E-85 642.4 43.5 426 1-463 3-438 (439)
2 2e1v_A Acyl transferase; BAHD 100.0 4E-78 1.4E-82 623.8 42.4 438 1-466 1-451 (454)
3 2xr7_A Malonyltransferase; xen 100.0 1.4E-78 4.6E-83 627.3 37.7 434 5-466 1-451 (453)
4 2bgh_A Vinorine synthase; VS, 100.0 1.1E-73 3.8E-78 584.7 37.3 406 2-465 1-415 (421)
5 2rkv_A Trichothecene 3-O-acety 100.0 1.2E-63 4.1E-68 515.5 30.9 403 26-464 4-446 (451)
6 1q9j_A PAPA5, polyketide synth 99.0 5.1E-08 1.7E-12 98.3 24.8 298 24-368 5-314 (422)
7 2jgp_A Tyrocidine synthetase 3 98.9 8.5E-06 2.9E-10 84.5 34.0 290 24-368 94-401 (520)
8 1l5a_A Amide synthase, VIBH; n 98.8 1.8E-05 6.3E-10 79.9 33.8 257 63-368 35-305 (436)
9 4hvm_A Tlmii; PSI-biology, mid 98.6 2.3E-06 7.7E-11 88.3 21.4 294 24-368 11-328 (493)
10 2xhg_A Tyrocidine synthetase A 98.5 7.2E-05 2.5E-09 76.1 27.7 304 24-369 15-337 (466)
11 2vsq_A Surfactin synthetase su 98.3 0.00011 3.8E-09 84.7 27.2 266 63-368 49-328 (1304)
12 3fot_A 15-O-acetyltransferase; 98.1 0.0003 1E-08 72.7 22.7 377 60-466 72-515 (519)
13 2kl8_A OR15; structural genomi 78.0 1.9 6.5E-05 29.9 3.2 38 61-98 10-47 (85)
14 1q23_A Chloramphenicol acetylt 74.7 2.3 7.9E-05 38.2 3.8 44 143-186 168-213 (219)
15 3cla_A Type III chloramphenico 73.9 2.4 8.2E-05 37.9 3.7 45 142-186 163-209 (213)
16 2i9d_A Chloramphenicol acetylt 72.9 2.6 9E-05 37.7 3.7 44 142-185 171-216 (217)
17 3b8k_A PDCE2;, dihydrolipoylly 68.6 3.5 0.00012 37.5 3.6 29 158-186 204-232 (239)
18 1dpb_A Dihydrolipoyl-transacet 68.0 3.8 0.00013 37.4 3.7 29 158-186 208-236 (243)
19 1scz_A E2, dihydrolipoamide su 67.9 3.9 0.00013 37.1 3.7 29 158-186 196-224 (233)
20 3rqc_A Probable lipoamide acyl 67.7 3.3 0.00011 37.3 3.2 29 158-186 187-215 (224)
21 4hhu_A OR280; engineered prote 66.8 5.8 0.0002 31.2 3.9 37 62-98 93-129 (170)
22 2ii3_A Lipoamide acyltransfera 66.3 4.3 0.00015 37.5 3.7 29 158-186 224-252 (262)
23 4hhu_A OR280; engineered prote 64.1 5.8 0.0002 31.2 3.5 95 63-187 13-107 (170)
24 3mae_A 2-oxoisovalerate dehydr 60.3 6.5 0.00022 36.1 3.7 29 158-186 210-238 (256)
25 3l60_A Branched-chain alpha-ke 58.8 7.1 0.00024 35.7 3.7 29 158-186 205-233 (250)
26 2xl1_A Arginine attenuator pep 56.2 8.4 0.00029 20.7 2.1 20 282-301 5-24 (26)
27 3dva_I Dihydrolipoyllysine-res 38.7 6.5 0.00022 39.1 0.0 29 158-186 391-419 (428)
28 1x93_A Hypothetical protein HP 32.7 83 0.0028 20.4 4.4 22 252-273 3-24 (55)
29 3qoq_A Alginate and motility r 23.0 1.6E+02 0.0055 20.8 5.1 46 250-306 19-64 (69)
No 1
>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A
Probab=100.00 E-value=5e-81 Score=642.38 Aligned_cols=426 Identities=23% Similarity=0.366 Sum_probs=349.6
Q ss_pred CCCcceEEEEeEEeeCCCCCCCCcceecCChhhhcccCCCCccEEEEEecCCCCCCcchhhhHHHHHHHHHHhhhhccCc
Q 012242 1 MAAASVKIHEAIKVTPFSSDSTTSFTLPLTYFDFFWLKFPPVERLFFYQICDLTWDSFSSVILPKLKHSLSLTVHHYLPL 80 (467)
Q Consensus 1 ~~~~~v~~~~~~~V~P~~~~~~~~~~~~LS~lD~~~~~~~yi~~~~~y~~~~~~~~~f~~~~~~~L~~sL~~~L~~~p~L 80 (467)
|++|+|++.+.++|+|+.|++ .+.++||+||+.+.. .|++.+|||+.++ . +. ...+++||+||+++|++||||
T Consensus 3 m~~~~V~i~~~~~V~P~~~tp--~~~~~LS~lD~~~~~-~~~~~~~~y~~~~-~-~~--~~~~~~Lk~sLs~~L~~f~pl 75 (439)
T 4g22_A 3 MGSMKIEVKESTMVRPAQETP--GRNLWNSNVDLVVPN-FHTPSVYFYRPTG-S-SN--FFDAKVLKDALSRALVPFYPM 75 (439)
T ss_dssp ---CCEEEEEEEEECCSSCCC--CCEECCCHHHHSCCT-TCCCEEEEECCCS-C-TT--TTCHHHHHHHHHHHTTTTGGG
T ss_pred CCceEEEEeeeEEEeCCCCCC--CCeecCChhHhCccc-cceeeEEEEcCCC-C-cc--ccHHHHHHHHHHHHHhhcccc
Confidence 567899999999999999987 778999999999654 5999999998754 3 21 246899999999999999999
Q ss_pred ceeEecCCCCCCcEEEEecCCceEEEEEEeCCcchhhhccCCCcccccCCCCCCCCCCCC--CCCcEEEEEEEeeCCCcE
Q 012242 81 AGHIMWPLEAPKPAVYFFPNDGVSFTVAESNNADFNHLSSNGIRRAVEFRPLVPEPSISD--DKAEVIAIQITLFPNQGF 158 (467)
Q Consensus 81 aGrl~~~~~~g~~~i~~~~~~gv~f~~a~~~~~~~~~l~~~~~~~~~~~~~l~p~~~~~~--~~~Pll~vQvt~~~~gG~ 158 (467)
||||+.+++ |+++|+|+ ++||.|+++++| ++++|+.... +...++.|+|..+... .+.|++.||||+|+|||+
T Consensus 76 AGRl~~~~~-g~~~i~c~-~~Gv~fv~A~~d-~~l~~l~~~~--p~~~~~~l~p~~~~~~~~~~~pll~vQvT~f~cGG~ 150 (439)
T 4g22_A 76 AGRLKRDED-GRIEIECN-GEGVLFVEAESD-GVVDDFGDFA--PTLELRRLIPAVDYSQGISSYALLVLQVTYFKCGGV 150 (439)
T ss_dssp GCEEEECTT-SCEEEECC-CCCEEEEEEEES-SCGGGGTTCC--CCGGGGGGSCCCCTTSCTTSSCSEEEEEEECTTSCE
T ss_pred ceeeeeCCC-CCEEEEEC-CCCCEEEEEEcC-CcHHHhcCCC--CCHHHHhcCCCCCcccccccCceeEEEEEEecCCCE
Confidence 999998776 89999995 899999999999 9999995422 3445667888765432 467999999999999999
Q ss_pred EEEEeeccccccchhhHHHHHHHHHHhhhhhcccccccccccCCCCCCCCcccccccc--CCCCcchHhhhhhhhhcccc
Q 012242 159 SIGISSHHAVLDGKSSTMFVKSWAYLCKQLQLQEDKNDVVLSSLPLQLTPCFDRSVIK--DPKGLDVVYANHWLEFANTR 236 (467)
Q Consensus 159 ~lg~~~~H~v~Dg~g~~~fl~~wa~~~r~~~~g~~~~~~~~~~~p~~~~P~~dr~~l~--~p~~~~~~~~~~~~~~~~~~ 236 (467)
+||+++||+++||.|+++|+++||++|| |.. . ..+|++||+.+. +|+..... +.+|...+...
T Consensus 151 ~lg~~~~H~v~Dg~~~~~Fl~~wa~~~r----g~~--------~--~~~P~~dr~~l~~~~pp~~~~~-~~~~~~~~~~~ 215 (439)
T 4g22_A 151 SLGVGMRHHAADGFSGLHFINSWSDMAR----GLD--------V--TLPPFIDRTLLRARDPPQPQFQ-HIEYQPPPALA 215 (439)
T ss_dssp EEEEEECTTTCCHHHHHHHHHHHHHHHT----TCC--------C--SSCCBCCGGGGCCCSSCCCSSC-CGGGSCCC---
T ss_pred EEEEEeeeccCcHHHHHHHHHHHHHHhC----CCC--------C--CCCCccccccccCCCCCCCCcC-cccccCCCCCc
Confidence 9999999999999999999999999999 864 1 356899999875 34432211 12232211000
Q ss_pred cccccCCcCCC-CCcEEEEEEeCHHHHHHHHHHHHHhhhhhccCccCccccHHHHHHHHHHHHHHhhcCCCCCCeEEEEE
Q 012242 237 SLKIIPMKQVN-SDLVRMTFEMRPEDITKLRDKIKENILQAGKSAEQLHLSTHVLACAHSFVCLVKAYGEETDTNVMFGV 315 (467)
Q Consensus 237 ~~~~~~~~~~~-~~~~~~~f~f~~~~l~~Lk~~~~~~~~~~~~~~~~~~~St~d~l~A~iW~~~~~ar~~~~~~~~~l~~ 315 (467)
. ...+....+ .++++++|+|++++|++||+.+.... +..++|+||+|+||+|+|++|||++.+++.+.+.+
T Consensus 216 ~-~~~~~~~~~~~~~~~~~f~fs~~~i~~LK~~a~~~~-------~~~~~St~dal~A~iWr~~~rAr~~~~~~~~~l~~ 287 (439)
T 4g22_A 216 V-SPQTAASDSVPETAVSIFKLTREQISALKAKSKEDG-------NTISYSSYEMLAGHVWRCACKARGLEVDQGTKLYI 287 (439)
T ss_dssp -------------CEEEEEEEECHHHHHHHHHGGGGGG-------CCCCCCHHHHHHHHHHHHHHHHTTCCTTCEEEEEE
T ss_pred c-cccccccCCcccceEEEEEECHHHHHHHHHHhhccC-------CCCCccHHHHHHHHHHHHHHHhcCCCCCCcEEEEE
Confidence 0 000000112 46889999999999999999887543 24579999999999999999999988889999999
Q ss_pred EecCCCccCCCCCCCccccccccceeeeecccccccCcHHHHHHHHHHHHHhhcchhhcchHHHHHHHhhccc---CC--
Q 012242 316 AADCRSRLDPPLPVNYFGNCVGGQGTVQKASYLMGENGEAFVAEKLSDCIKELKGDVIEGSEDKFVNVLGMMK---GE-- 390 (467)
Q Consensus 316 ~vd~R~rl~p~lp~~Y~GN~~~~~~~~~~~~~l~~~~~l~~~A~~IR~ai~~~~~~~v~~~~~~~~~~~~~~~---~~-- 390 (467)
+||+|+|++||+|++||||++..+.+.++++||.+ ++|+++|..||+++++++++++++.++|++.. ++.. .+
T Consensus 288 ~vd~R~rl~Pplp~~Y~GN~v~~~~~~~~~~el~~-~~L~~~A~~Ir~ai~~~~~e~~~~~~~~~~~~-~~~~~~~~~~~ 365 (439)
T 4g22_A 288 ATDGRARLRPSLPPGYFGNVIFTATPIAIAGDLEF-KPVWYAASKIHDALARMDNDYLRSALDYLELQ-PDLKALVRGAH 365 (439)
T ss_dssp EEECTTTSSSCCCTTBCSCCEEEECCEEEHHHHHH-SCHHHHHHHHHHHHHTCSHHHHHHHHHHHHTC-SCSTTCCCCHH
T ss_pred EEcccCCCCCCCCCCcccceeehhhcceEHHHHhh-CcHHHHHHHHHHHHHhhCHHHHHHHHHHHHhC-ccchhhcccCC
Confidence 99999999999999999999999999999999986 89999999999999999999999999999865 4321 11
Q ss_pred CcccceEEEeccCCCcccccccCCCccceeEEeeecCCceEEEeecCCCCCcEEEEEEeCHHHHHHHHHHHHh
Q 012242 391 GLQQRILSVAGSNRFDVYGSDFGWGKPKKVEIVSIDKTGAISLAESGDGSGGIEVGVVLEKHQMEVFASLFTD 463 (467)
Q Consensus 391 ~~~~~~~~vtsw~~~~~~~~DFG~G~P~~~~~~~~~~~g~v~i~p~~~~~gg~ev~v~L~~~~m~~l~~~~~~ 463 (467)
.+....+.+|||+++++|++|||||||+++++.....+|.++++|+++++||++|.|+|++++|++|+++|++
T Consensus 366 ~~~~~~~~vssw~r~~~y~~DFGwGkP~~~~~~~~~~~g~~~~~p~~~~~ggi~v~v~L~~~~m~~f~~~~~~ 438 (439)
T 4g22_A 366 TFKCPNLGITSWVRLPIHDADFGWGRPIFMGPGGIAYEGLSFILPSPTNDGSMSVAISLQGEHMKLFQSFLYD 438 (439)
T ss_dssp HHCTTCEEEEECTTSCTTCCCCSSCCCSEEEESSCCSTTEEEEEECTTCSSCEEEEEEEEHHHHHHHHHHHTC
T ss_pred cCcCCcEEEeecCcCCccccccCCCCcceeeccccCCCcEEEEeecCCCCCcEEEEEECCHHHHHHHHHHhcc
Confidence 0113679999999999999999999999999876667899999999888899999999999999999999975
No 2
>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A
Probab=100.00 E-value=4e-78 Score=623.82 Aligned_cols=438 Identities=34% Similarity=0.618 Sum_probs=344.7
Q ss_pred CCC-cceEEEEeEEeeCCCCCCCCcceecCChhhhcccCCCCccEEEEEecCCCCCCcchhhhHHHHHHHHHHhhhhccC
Q 012242 1 MAA-ASVKIHEAIKVTPFSSDSTTSFTLPLTYFDFFWLKFPPVERLFFYQICDLTWDSFSSVILPKLKHSLSLTVHHYLP 79 (467)
Q Consensus 1 ~~~-~~v~~~~~~~V~P~~~~~~~~~~~~LS~lD~~~~~~~yi~~~~~y~~~~~~~~~f~~~~~~~L~~sL~~~L~~~p~ 79 (467)
||. .+|++.+.++|+|+.|+++ .+.++||.||+.+...+|++.+|||+.++ ..++|.++++++||+||+++|++|||
T Consensus 1 ~~~~~~v~v~~~~~V~P~~~~~~-~~~~~LS~lD~~~~~~~~~~~~~~y~~~~-~~~~~~~~~~~~Lk~sLs~~L~~~~p 78 (454)
T 2e1v_A 1 MASLPILTVLEQSQVSPPPDTLG-DKSLQLTFFDFFWLRSPPINNLFFYELPI-TRSQFTETVVPNIKHSLSITLKHFYP 78 (454)
T ss_dssp -----CEEEEEEEEECCCTTSCC-CEEEECCHHHHTTTTCCCEEEEEEEECCC-CHHHHHHTHHHHHHHHHHHHHTTCGG
T ss_pred CCCCceEEEEEEEEEeCCCCCCC-CceecCchHHhhhhccCCccEEEEEeCCC-CcchhhHHHHHHHHHHHHHHhhhccc
Confidence 454 6899999999999987554 78999999999876667999999999754 32222346799999999999999999
Q ss_pred cceeEe-cCCCCCCcEEEEecCCceEEEEEEeCCcchhhhccCCCcccccCCCCCCCCCCCC-----CCCcEEEEEEEee
Q 012242 80 LAGHIM-WPLEAPKPAVYFFPNDGVSFTVAESNNADFNHLSSNGIRRAVEFRPLVPEPSISD-----DKAEVIAIQITLF 153 (467)
Q Consensus 80 LaGrl~-~~~~~g~~~i~~~~~~gv~f~~a~~~~~~~~~l~~~~~~~~~~~~~l~p~~~~~~-----~~~Pll~vQvt~~ 153 (467)
|||||+ .++++|+++|+|++++||.|++++++ .+++++.+..+.+...+..|+|..+... .+.|++.||||+|
T Consensus 79 lAGRl~~~~~~~g~~~i~c~~~~gv~fv~A~~~-~~l~~l~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~pll~vQvT~f 157 (454)
T 2e1v_A 79 FVGKLVVYPAPTKKPEICYVEGDSVAVTFAECN-LDLNELTGNHPRNCDKFYDLVPILGESTRLSDCIKIPLFSVQVTLF 157 (454)
T ss_dssp GGSEEEECSSSSSCCEEEECTTCCEEEEEEEEC-SCGGGTSSSSCEEGGGGGGGSCCCCCCEECSSCEEEECEEEEEEEE
T ss_pred cceeeeeccCCCCCEEEEECCCCcEEEEEEEeC-CCHHHhcCCCCCcchhhhcCCCCCCCcccccccccCceEEEEEEEe
Confidence 999998 65445899999964589999999999 9999996544334445667888754322 2349999999999
Q ss_pred CCCcEEEEEeeccccccchhhHHHHHHHHHHhhhhhcccccccccccCCCCCCCCccccccccCCCCcchHhhhhhhhhc
Q 012242 154 PNQGFSIGISSHHAVLDGKSSTMFVKSWAYLCKQLQLQEDKNDVVLSSLPLQLTPCFDRSVIKDPKGLDVVYANHWLEFA 233 (467)
Q Consensus 154 ~~gG~~lg~~~~H~v~Dg~g~~~fl~~wa~~~r~~~~g~~~~~~~~~~~p~~~~P~~dr~~l~~p~~~~~~~~~~~~~~~ 233 (467)
+|||++||+++||+++||.|+++|+++||++|| .|.... ...++.+.|++|| .+..|+ ++..+...+....
T Consensus 158 ~cgG~~lg~~~~H~v~Dg~~~~~Fl~awa~~~r---~g~~~~----~~~~~~~~P~~dr-~l~~p~-~~~~~~~~~~~~~ 228 (454)
T 2e1v_A 158 PNQGIAIGITNHHCLGDASTRFCFLKAWTSIAR---SGNNDE----SFLANGTRPLYDR-IIKYPM-LDEAYLKRAKVES 228 (454)
T ss_dssp TTTEEEEEEEECGGGCCHHHHHHHHHHHHHHHH---TTSCCH----HHHHHSCCCBCCC-CCCCHH-HHHHHHHHTTCTT
T ss_pred cCCcEEEEEEeeeeecchhHHHHHHHHHHHHhc---cCCCcc----ccCCCCCCCcccc-cCCCCC-cchHHHHhhhccc
Confidence 999999999999999999999999999999999 343100 0001134689999 776544 3322222221100
Q ss_pred ccccccccCC-cCCCCCcEEEEEEeCHHHHHHHHHHHHHhhhhhccCccCccccHHHHHHHHHHHHHHhhcCCCCCCeEE
Q 012242 234 NTRSLKIIPM-KQVNSDLVRMTFEMRPEDITKLRDKIKENILQAGKSAEQLHLSTHVLACAHSFVCLVKAYGEETDTNVM 312 (467)
Q Consensus 234 ~~~~~~~~~~-~~~~~~~~~~~f~f~~~~l~~Lk~~~~~~~~~~~~~~~~~~~St~d~l~A~iW~~~~~ar~~~~~~~~~ 312 (467)
.. ..+.+. ...+.+.++++|+|++++|++||+.+.+... ...++|+||+|+||+|+|++||| +++.+.
T Consensus 229 ~~--~~~~~~~~~~~~~~~~~~f~f~~~~i~~LK~~a~~~~~------~~~~~St~d~l~A~lWr~~~~Ar---~~~~~~ 297 (454)
T 2e1v_A 229 FN--EDYVTQSLAGPSDKLRATFILTRAVINQLKDRVLAQLP------TLEYVSSFTVACAYIWSCIAKSR---NDKLQL 297 (454)
T ss_dssp HH--HHCCCCCCCCCCCEEEEEEEECHHHHHHHHHHHHHHCT------TCSCCCHHHHHHHHHHHHHHHHH---CCSEEE
T ss_pred cc--cccCcccCCCCCCceEEEEEECHHHHHHHHHHHhhcCC------CCCcccHHHHHHHHHHHHHhhhc---CCCceE
Confidence 00 000000 0023467899999999999999999976531 12579999999999999999999 678999
Q ss_pred EEEEecCCCccCCCCCCCccccccccceeeeecccccccCcHHHHHHHHHHHHHhhc----chhhcc-hHHHHHHHhhcc
Q 012242 313 FGVAADCRSRLDPPLPVNYFGNCVGGQGTVQKASYLMGENGEAFVAEKLSDCIKELK----GDVIEG-SEDKFVNVLGMM 387 (467)
Q Consensus 313 l~~~vd~R~rl~p~lp~~Y~GN~~~~~~~~~~~~~l~~~~~l~~~A~~IR~ai~~~~----~~~v~~-~~~~~~~~~~~~ 387 (467)
+.++||+|+|++||+|++||||++..+.+.++++||.++++|+++|..||+++.+++ ++++++ +.+|++.. +.+
T Consensus 298 l~~~vd~R~rl~pplP~~Y~GN~~~~~~~~~~~~el~~~~~l~~~a~~Ir~ai~~~~~~~~~~~~~~~~~~~~~~~-~~~ 376 (454)
T 2e1v_A 298 FGFPIDRRARMKPPIPTAYFGNCVGGCAAIAKTNLLIGKEGFITAAKLIGENLHKTLTDYKDGVLKDDMESFNDLV-SEG 376 (454)
T ss_dssp EEEEEECGGGSSSCCCTTBCSCCEEEEEEEEEGGGTSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCC-----CHHH-HHC
T ss_pred EEEEecchhccCCCCCcccccceeeeEEeecchhhccccccHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHH-Hhh
Confidence 999999999999999999999999999999999999843799999999999999996 667788 77888765 433
Q ss_pred cCCCcccceEEEeccCCCcccccccCCCccceeEEeeecCCceEEEeecCCCCCcEEEEEEeCHHHHHHHHHHHHhhhc
Q 012242 388 KGEGLQQRILSVAGSNRFDVYGSDFGWGKPKKVEIVSIDKTGAISLAESGDGSGGIEVGVVLEKHQMEVFASLFTDGLQ 466 (467)
Q Consensus 388 ~~~~~~~~~~~vtsw~~~~~~~~DFG~G~P~~~~~~~~~~~g~v~i~p~~~~~gg~ev~v~L~~~~m~~l~~~~~~~~~ 466 (467)
. + +..+.+|||+++++|++|||||||+++++...+.+|.++|+|+++++||++|.|+|++++|++|+++|.+.|.
T Consensus 377 ~-~---~~~~~vssw~~~~~y~~DFG~G~P~~v~~~~~~~~g~~~l~p~~~~~ggi~v~v~L~~~~m~~f~~~~~~~~~ 451 (454)
T 2e1v_A 377 M-P---TTMTWVSGTPKLRFYDMDFGWGKPKKLETVSIDHNGAISINSCKESNEDLEIGVCISATQMEDFVHIFDDGLK 451 (454)
T ss_dssp C-C---SEEEEEECCTTSCGGGCCSSSCSCSEEEEGGGGGSSEEEEEECSSCTTSEEEEEEEEHHHHHHHHHHHHHHC-
T ss_pred c-C---CceEEEecCCCCCcccccccCccceEEEeeeeCCCCeEEEEecCCCCCCEEEEEEECHHHHHHHHHHHHHHHH
Confidence 2 1 2589999999999999999999999999876666899999999888899999999999999999999999875
No 3
>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum}
Probab=100.00 E-value=1.4e-78 Score=627.32 Aligned_cols=434 Identities=37% Similarity=0.677 Sum_probs=352.1
Q ss_pred ceEEEEeEEeeCCCCCCCCcceecCChhhhcccCCCCccEEEEEecCCCCCCcchhhhHHHHHHHHHHhhhhccCcceeE
Q 012242 5 SVKIHEAIKVTPFSSDSTTSFTLPLTYFDFFWLKFPPVERLFFYQICDLTWDSFSSVILPKLKHSLSLTVHHYLPLAGHI 84 (467)
Q Consensus 5 ~v~~~~~~~V~P~~~~~~~~~~~~LS~lD~~~~~~~yi~~~~~y~~~~~~~~~f~~~~~~~L~~sL~~~L~~~p~LaGrl 84 (467)
+|++.++++|+|+.|+++ .+.++||+||+.+.+.+|++.+|||+.+. ..++|.++++++||+||+++|++||||||||
T Consensus 1 ~v~v~~~~~V~P~~~~~~-~~~~~LS~lD~~~~~~~~~~~~~~y~~~~-~~~~~~~~~~~~Lk~sLs~~L~~~~plAGRl 78 (453)
T 2xr7_A 1 MASVIEQCQVVPSPGSAT-ELTLPLTYFDHVWLAFHRMRRILFYKLPI-SRPDFVQTIIPTLKDSLSLTLKYYLPLAGNV 78 (453)
T ss_dssp -CEEEEESCCCCCTTCCS-EEEEECCHHHHGGGGSCCEEEEEEEECCC-CSHHHHHTHHHHHHHHHHHHHTTSGGGGSCC
T ss_pred CeEEEEEEEecCCCCCCC-CceECCCHHHhhhhhcCCccEEEEEeCCC-CCchhHHHHHHHHHHHHHHHhhhccccCeeE
Confidence 389999999999987554 78999999999866667999999999754 3222335689999999999999999999999
Q ss_pred ecCCC-CCCcEEEEecCCceEEEEEEeCCcchhhhccCCCcccccCCCCCCCCCCCCCC-----CcEEEEEEEeeCCCcE
Q 012242 85 MWPLE-APKPAVYFFPNDGVSFTVAESNNADFNHLSSNGIRRAVEFRPLVPEPSISDDK-----AEVIAIQITLFPNQGF 158 (467)
Q Consensus 85 ~~~~~-~g~~~i~~~~~~gv~f~~a~~~~~~~~~l~~~~~~~~~~~~~l~p~~~~~~~~-----~Pll~vQvt~~~~gG~ 158 (467)
+.+++ +|+++|+|++++||.|++++++ .+++++.++.+.+...+..|+|..+..... .|++.+|||+|+|||+
T Consensus 79 ~~~~~~~g~~~i~c~~~~gv~fv~A~~~-~~l~~l~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~pll~vQvT~f~cGG~ 157 (453)
T 2xr7_A 79 ACPQDWSGYPELRYVTGNSVSVIFSESD-MDFNYLIGYHPRNTKDFYHFVPQLAEPKDAPGVQLAPVLAIQVTLFPNHGI 157 (453)
T ss_dssp EEESSTTCCCEEEEETTCCCEEEEEECC-SCHHHHTCSSCCCGGGGGGGSCCCCCCEEETTEEECCCEEEEEEEETTTEE
T ss_pred EccCCCCCCEEEEecCCCceEEEEEecC-CCHHHhhccCCCChhhhhcCCCCCCCcccccccccCCeEEEEEEEccCCcE
Confidence 98753 5899999975689999999999 999999754434455566788875533223 8999999999999999
Q ss_pred EEEEeeccccccchhhHHHHHHHHHHhhhhhcccccccccccCCCCCCCCccccccccCCCCcchHhhhhhhhhcccccc
Q 012242 159 SIGISSHHAVLDGKSSTMFVKSWAYLCKQLQLQEDKNDVVLSSLPLQLTPCFDRSVIKDPKGLDVVYANHWLEFANTRSL 238 (467)
Q Consensus 159 ~lg~~~~H~v~Dg~g~~~fl~~wa~~~r~~~~g~~~~~~~~~~~p~~~~P~~dr~~l~~p~~~~~~~~~~~~~~~~~~~~ 238 (467)
+||+++||+++||.|+++|+++||++|| .|... ...++.+.|++||+.+..|+.+...+...+... ...
T Consensus 158 ~lg~~~~H~v~Dg~~~~~Fl~~wa~~~r---~G~~~-----~~~~~~~~P~~dr~~l~~p~~~~~~~~~~~~~~---~~~ 226 (453)
T 2xr7_A 158 SIGFTNHHVAGDGATIVKFVRAWALLNK---FGGDE-----QFLANEFIPFYDRSVIKDPNGVGMSIWNEMKKY---KHM 226 (453)
T ss_dssp EEEEEECTTTCCSHHHHHHHHHHHHHHH---TTTCG-----GGSCGGGSCBCCCSSSCCSSCHHHHTTTTGGGC---TTT
T ss_pred EEEEeeeeeeechhHHHHHHHHHHHHhh---cCCCc-----ccCCCCCCCccccccccCCCCcchHHHHhcccc---CCc
Confidence 9999999999999999999999999999 34310 002234568999998887665433222222110 000
Q ss_pred -cccCCcCCCCCcEEEEEEeCHHHHHHHHHHHHHhhhhhccCccCccccHHHHHHHHHHHHHHhhcCC-----CCCCeEE
Q 012242 239 -KIIPMKQVNSDLVRMTFEMRPEDITKLRDKIKENILQAGKSAEQLHLSTHVLACAHSFVCLVKAYGE-----ETDTNVM 312 (467)
Q Consensus 239 -~~~~~~~~~~~~~~~~f~f~~~~l~~Lk~~~~~~~~~~~~~~~~~~~St~d~l~A~iW~~~~~ar~~-----~~~~~~~ 312 (467)
.... ...+.++++++|+|++++|++||+.+.+... ...++|+||+|+||+|+|+++||.. .+++.+.
T Consensus 227 ~~~~~-~~~~~~~~~~~f~f~~~~i~~Lk~~a~~~~~------~~~~~St~~~l~A~lW~~~~~Ar~~~~~~~~~~~~~~ 299 (453)
T 2xr7_A 227 MKMSD-VVTPPDKVRGTFIITRHDIGKLKNLVLTRRP------KLTHVTSFTVTCAYVWTCIIKSEAATGEEIDENGMEF 299 (453)
T ss_dssp SCCSC-CCCCCSCCCEEEEECHHHHHHHHHHHHHHSC------CCSCCCHHHHHHHHHHHHHHHHHHHTTCCCCTTSEEE
T ss_pred ccccc-ccCCCCceEEEEEECHHHHHHHHHHHhhcCC------CCCcccHHHHHHHHHHHHHHHHhccccccCCCCcceE
Confidence 0000 0113467789999999999999999976531 1257999999999999999999975 5678999
Q ss_pred EEEEecCCCccCCCCCCCccccccccceeeeecccccccCcHHHHHHHHHHHHHh--hcch-hhcchHHHHHHHhhcccC
Q 012242 313 FGVAADCRSRLDPPLPVNYFGNCVGGQGTVQKASYLMGENGEAFVAEKLSDCIKE--LKGD-VIEGSEDKFVNVLGMMKG 389 (467)
Q Consensus 313 l~~~vd~R~rl~p~lp~~Y~GN~~~~~~~~~~~~~l~~~~~l~~~A~~IR~ai~~--~~~~-~v~~~~~~~~~~~~~~~~ 389 (467)
+.++||+|+|++||+|++||||++..+.+.++++||.++++|+++|..||+++.+ ++++ ++++ +|++.. +.+.
T Consensus 300 l~~~vd~R~rl~pplP~~Y~GN~~~~~~~~~~~~el~~~~~l~~~a~~Ir~ai~~~~~~~e~~~~~--~~~~~~-~~~~- 375 (453)
T 2xr7_A 300 FGCAADCRAQFNPPLPPSYFGNALVGYVARTRQVDLAGKEGFTIAVELIGEAIRKRMKDEEWILSG--SWFKEY-DKVD- 375 (453)
T ss_dssp EEEECCTTSCSSSCCCTTBCSCCCCEEEEEEEHHHHTSSSHHHHHHHHHHHHHTTSSSCHHHHHSS--CTTSCC-CCSC-
T ss_pred EEEEecccccCCCCCCcccccceeeeeeeeeeHHHhcCcchHHHHHHHHHHHHHhhccCCccchhh--HHHHHH-Hhhc-
Confidence 9999999999999999999999999999999999998447999999999999999 5777 8988 787655 4322
Q ss_pred CCcccceEEEeccCCCcccccccCCCccceeEEeeecCCc--eEEEeecCCCCCcEEEEEEeCHHHHHHHHHHHHhhhc
Q 012242 390 EGLQQRILSVAGSNRFDVYGSDFGWGKPKKVEIVSIDKTG--AISLAESGDGSGGIEVGVVLEKHQMEVFASLFTDGLQ 466 (467)
Q Consensus 390 ~~~~~~~~~vtsw~~~~~~~~DFG~G~P~~~~~~~~~~~g--~v~i~p~~~~~gg~ev~v~L~~~~m~~l~~~~~~~~~ 466 (467)
.+..+.+|||+++++|++|||||||+++++...+.+| .++|+|+++++||++|.|+|++++|++|+++|.+.|.
T Consensus 376 ---~~~~~~vssw~~~~~y~~DFG~G~P~~v~~~~~~~~g~~~~~l~~~~~~~ggi~v~v~L~~~~m~~f~~~~~~~~~ 451 (453)
T 2xr7_A 376 ---AKRSLSVAGSPKLDLYAADFGWGRPEKLEFVSIDNDDGISMSLSKSKDSDGDLEIGLSLSKTRMNAFAAMFTHGIS 451 (453)
T ss_dssp ---GGGEEEECSCSSCCGGGCCCSSCSCSEEEEGGGSSCSSCEEEEEECSSSTTCEEEEECCCHHHHHHHHHHHHHHHT
T ss_pred ---cCCcEEEeccccCCccccccCCCcceEEEeeeecCCCceEEEEeecCCCCCCEEEEEEeCHHHHHHHHHHHHHHhh
Confidence 1368999999999999999999999999987666788 8889998888899999999999999999999999875
No 4
>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina}
Probab=100.00 E-value=1.1e-73 Score=584.68 Aligned_cols=406 Identities=21% Similarity=0.303 Sum_probs=329.6
Q ss_pred CCcceEEEEeEEeeCCCCCCCCcceecCChhhhcccCCCCccEEEEEecCCCCCCcchhhhHHHHHHHHHHhhhhccCcc
Q 012242 2 AAASVKIHEAIKVTPFSSDSTTSFTLPLTYFDFFWLKFPPVERLFFYQICDLTWDSFSSVILPKLKHSLSLTVHHYLPLA 81 (467)
Q Consensus 2 ~~~~v~~~~~~~V~P~~~~~~~~~~~~LS~lD~~~~~~~yi~~~~~y~~~~~~~~~f~~~~~~~L~~sL~~~L~~~p~La 81 (467)
|+|+|++.++++|+|+.|++.+.+.++||.||+.++ ..|++.++||+.++ ......+.++++||+||+++|++|||||
T Consensus 1 m~m~v~v~~~~~V~P~~ptp~~~~~~~LS~lD~~~~-~~~~~~~~~y~~~~-~~~~~~~~~~~~Lk~sLs~~L~~~~plA 78 (421)
T 2bgh_A 1 MAPQMEKVSEELILPSSPTPQSLKCYKISHLDQLLL-TCHIPFILFYPNPL-DSNLDPAQTSQHLKQSLSKVLTHFYPLA 78 (421)
T ss_dssp ---CEEEEEEEEEECSSCCCTTSCCCBCCHHHHTSC-SSEEEEEEEECCCS-SCCCCHHHHHHHHHHHHHHHTTTSGGGG
T ss_pred CCceEEEeeeEEEeCCCCCCCCCcccCCChHHhccc-ccccceEEEEeCCC-ccccchhhHHHHHHHHHHHHhhhcchhc
Confidence 358899999999999999875466999999999865 45999999998754 2100134689999999999999999999
Q ss_pred eeEecCCCCCCcEEEEecCCceEEEEEEeCCcchhhhccCCCcccccCCCCCCCCCCC-----CCCCcEEEEEEEeeCCC
Q 012242 82 GHIMWPLEAPKPAVYFFPNDGVSFTVAESNNADFNHLSSNGIRRAVEFRPLVPEPSIS-----DDKAEVIAIQITLFPNQ 156 (467)
Q Consensus 82 Grl~~~~~~g~~~i~~~~~~gv~f~~a~~~~~~~~~l~~~~~~~~~~~~~l~p~~~~~-----~~~~Pll~vQvt~~~~g 156 (467)
|||+. +++|+|+ ++||.|+++++| ++++++....+ ....++.|+|..... ..+.|++.+|||+|+||
T Consensus 79 GRl~~-----~~~i~c~-~~Gv~fv~A~~d-~~l~~~~~~~p-~~~~~~~l~p~~~~~~~~~~~~~~pll~vQvt~f~cg 150 (421)
T 2bgh_A 79 GRINV-----NSSVDCN-DSGVPFVEARVQ-AQLSQAIQNVV-ELEKLDQYLPSAAYPGGKIEVNEDVPLAVKISFFECG 150 (421)
T ss_dssp SEEET-----TTEEECC-CCCEEEEEEEES-SCHHHHHSCCS-SGGGGGGGSSSCSSSSSSSCCCTTCSEEEEEEECTTS
T ss_pred cccCC-----CcEEEEc-CCceEEEEEEEc-CCHHHHhccCC-ChHHHHhcCCCCCCccccccccCCceEEEEEEEEcCC
Confidence 99972 5899996 789999999999 99999864323 223455677654211 34689999999999999
Q ss_pred cEEEEEeeccccccchhhHHHHHHHHHHhhhhhcccccccccccCCCCCCCCcccc-ccccCC-CCcchHhhhhhhhhcc
Q 012242 157 GFSIGISSHHAVLDGKSSTMFVKSWAYLCKQLQLQEDKNDVVLSSLPLQLTPCFDR-SVIKDP-KGLDVVYANHWLEFAN 234 (467)
Q Consensus 157 G~~lg~~~~H~v~Dg~g~~~fl~~wa~~~r~~~~g~~~~~~~~~~~p~~~~P~~dr-~~l~~p-~~~~~~~~~~~~~~~~ 234 (467)
|++||+++||+++||.|+++|+++||++|| |... + ..|++|| +.+..+ .....
T Consensus 151 G~~lg~~~~H~v~Dg~~~~~fl~~wa~~~r----g~~~--------~--~~P~~dr~~~l~p~~~~~~~----------- 205 (421)
T 2bgh_A 151 GTAIGVNLSHKIADVLSLATFLNAWTATCR----GETE--------I--VLPNFDLAARHFPPVDNTPS----------- 205 (421)
T ss_dssp CEEEEEEEETTTCCHHHHHHHHHHHHHHHT----TCSC--------C--CCCBCSHHHHHSCCCTTCCC-----------
T ss_pred CEEEEEEeeEEechHHHHHHHHHHHHHHhc----CCCC--------C--CCCccccccccCCCcccCCC-----------
Confidence 999999999999999999999999999999 8641 2 4688998 655322 11110
Q ss_pred cccccccCCcCCCCCcEEEEEEeCHHHHHHHHHHHHHhhhhhccCccCccccHHHHHHHHHHHHHHhhcCCC--CCCeEE
Q 012242 235 TRSLKIIPMKQVNSDLVRMTFEMRPEDITKLRDKIKENILQAGKSAEQLHLSTHVLACAHSFVCLVKAYGEE--TDTNVM 312 (467)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~f~f~~~~l~~Lk~~~~~~~~~~~~~~~~~~~St~d~l~A~iW~~~~~ar~~~--~~~~~~ 312 (467)
+....+.++++++|+|++++|++||+.+.+.. ...++|+||+|+||+|+|+++||... +++.+.
T Consensus 206 -------~~~~~~~~~~~~~f~f~~~~i~~LK~~a~~~~-------~~~~~St~d~l~A~iW~~~~~Ar~~~~~~~~~~~ 271 (421)
T 2bgh_A 206 -------PELVPDENVVMKRFVFDKEKIGALRAQASSAS-------EEKNFSRVQLVVAYIWKHVIDVTRAKYGAKNKFV 271 (421)
T ss_dssp -------CCCCCCSSEEEEEEEECHHHHHHHHHHTC------------CCCCHHHHHHHHHHHHHHHHHHHHSCCCSCEE
T ss_pred -------CccCCccceEEEEEEECHHHHHHHHHHhhccC-------CCCCCchhHhHHHHHHHHHHHHhcccCCCCCceE
Confidence 00111346889999999999999999886543 12579999999999999999998642 567999
Q ss_pred EEEEecCCCccCCCCCCCccccccccceeeeecccccccCcHHHHHHHHHHHHHhhcchhhcchHHHHHHHhhcccCCCc
Q 012242 313 FGVAADCRSRLDPPLPVNYFGNCVGGQGTVQKASYLMGENGEAFVAEKLSDCIKELKGDVIEGSEDKFVNVLGMMKGEGL 392 (467)
Q Consensus 313 l~~~vd~R~rl~p~lp~~Y~GN~~~~~~~~~~~~~l~~~~~l~~~A~~IR~ai~~~~~~~v~~~~~~~~~~~~~~~~~~~ 392 (467)
+.++||+|+|++||+|++||||++..+.+.+++++ + .+|+++|..||+++.++++++++.+.++.+.. ... ..
T Consensus 272 l~~~vd~R~rl~pplP~~y~GN~~~~~~~~~~~~~--~-~~l~~~a~~ir~ai~~~~~~~~~~~~~~~~~~-~~~--~~- 344 (421)
T 2bgh_A 272 VVQAVNLRSRMNPPLPHYAMGNIATLLFAAVDAEW--D-KDFPDLIGPLRTSLEKTEDDHNHELLKGMTCL-YEL--EP- 344 (421)
T ss_dssp EEEEEESGGGSSSCCCTTBCSCCEEEEEEEECTTC--C-CCGGGGHHHHHHHTCCCSSCHHHHHHHHHHHH-HTS--CG-
T ss_pred EEEEecCccccCCCCCCCccceEEEEEEEEecccc--c-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcc--CC-
Confidence 99999999999999999999999999999888876 3 89999999999999999988998877776544 321 11
Q ss_pred ccceEEEeccCCCcccccccCCCccceeEEeeecCCceEEEeecCCCCCcEEEEEEeCHHHHHHHHHHHHhhh
Q 012242 393 QQRILSVAGSNRFDVYGSDFGWGKPKKVEIVSIDKTGAISLAESGDGSGGIEVGVVLEKHQMEVFASLFTDGL 465 (467)
Q Consensus 393 ~~~~~~vtsw~~~~~~~~DFG~G~P~~~~~~~~~~~g~v~i~p~~~~~gg~ev~v~L~~~~m~~l~~~~~~~~ 465 (467)
...+.+|||.++++|++|||||||+++++...+.+|.++++|++++ +|++|.|+|++++|++|+++|.++.
T Consensus 345 -~~~~~vssw~~~~~y~~DFGwGkP~~v~~~~~~~~g~~~~~p~~~~-~gi~v~v~L~~~~m~~f~~e~~~~~ 415 (421)
T 2bgh_A 345 -QELLSFTSWCRLGFYDLDFGWGKPLSACTTTFPKRNAALLMDTRSG-DGVEAWLPMAEDEMAMLPVELLSLV 415 (421)
T ss_dssp -GGEEEEEEETTSCGGGCCSSSCCCSEEECCCCCSTTEEEEEECTTS-SSEEEEEEEEHHHHHHSCHHHHTTB
T ss_pred -CCeEEEeccccCCCcccccCCCccCeecccccCcCCEEEEEecCCC-CeEEEEEEcCHHHHHHHHHHHHHhh
Confidence 2579999999999999999999999999876667899999999875 4899999999999999999988764
No 5
>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A*
Probab=100.00 E-value=1.2e-63 Score=515.52 Aligned_cols=403 Identities=14% Similarity=0.140 Sum_probs=303.8
Q ss_pred eecCChhhhccc-CCCCccEEEEEecCCCCCCcchhhhHHHHHHHHHHhhhhccCcceeEecCC----CCCCcEEEEecC
Q 012242 26 TLPLTYFDFFWL-KFPPVERLFFYQICDLTWDSFSSVILPKLKHSLSLTVHHYLPLAGHIMWPL----EAPKPAVYFFPN 100 (467)
Q Consensus 26 ~~~LS~lD~~~~-~~~yi~~~~~y~~~~~~~~~f~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~----~~g~~~i~~~~~ 100 (467)
..+||.+||+++ ...|++.++||+.++ ..+ .++++++||+||+++|++||||||||+.++ ++|+++|+|+ +
T Consensus 4 ~~~Ls~lD~~~~~~~~y~~~~~~y~~~~-~~~--~~~~~~~Lk~sLs~~L~~~~plAGRl~~~~~~~~~~g~~~i~~~-~ 79 (451)
T 2rkv_A 4 KIQLDTLGQLPGLLSIYTQISLLYPVSD-SSQ--YPTIVSTFEQGLKRFSEAVPWVAGQVKAEGISEGNTGTSFIVPF-E 79 (451)
T ss_dssp CEECCGGGGCTTGGGCEEEEEEEEECSC-GGG--HHHHHHHHHHHHHHHHHHSGGGGCEEEEESCBTTBCCEEEEECC-C
T ss_pred cccCChhhcCccccccceeEEEEEECCC-CCC--HHHHHHHHHHHHHHHHHhCCceeEEEEECCCCCCCCCcEEEeec-C
Confidence 469999999961 234999999999654 212 356899999999999999999999998764 2488999974 5
Q ss_pred CceEEEEEEeCCc-----chhhhcc-CCCcccccCC--CCCCC--CCC-----CCCCCcEEEEEEEeeCCCcEEEEEeec
Q 012242 101 DGVSFTVAESNNA-----DFNHLSS-NGIRRAVEFR--PLVPE--PSI-----SDDKAEVIAIQITLFPNQGFSIGISSH 165 (467)
Q Consensus 101 ~gv~f~~a~~~~~-----~~~~l~~-~~~~~~~~~~--~l~p~--~~~-----~~~~~Pll~vQvt~~~~gG~~lg~~~~ 165 (467)
.++.|++++++ . ++++|.. +.|. ..+. .+.|. .+. ...+.|++.||||+| |||++||+++|
T Consensus 80 ~~~~~~va~~~-~d~~~p~~~~l~~~~~p~--~~~~~~~~~p~~~~p~~~~~~~~~~~pll~vQvT~~-~GG~~lg~~~~ 155 (451)
T 2rkv_A 80 DVPRVVVKDLR-DDPSAPTIEGMRKAGYPM--AMFDENIIAPRKTLPIGPGTGPDDPKPVILLQLNFI-KGGLILTVNGQ 155 (451)
T ss_dssp SSCEEEEEECT-TCTTSCBHHHHHHHTSCG--GGSBHHHHCSSCSSSCSTTCSTTSCCBSEEEEEEEE-BTEEEEEEEEE
T ss_pred CCCeEEEEeCC-CCCCCCCHHHHHHcCCCh--hhcCHhhcCCcccCCCCcccCCCCCCceEEEEEEEe-cCceeeeeeeh
Confidence 56669998876 3 6777753 2222 1111 12221 111 123589999999988 89999999999
Q ss_pred cccccchhhHHHHHHHHHHhhhhhcccccccccccCCCC--CCCCccccccccC-----CCCcchHhhhhhhhhcccccc
Q 012242 166 HAVLDGKSSTMFVKSWAYLCKQLQLQEDKNDVVLSSLPL--QLTPCFDRSVIKD-----PKGLDVVYANHWLEFANTRSL 238 (467)
Q Consensus 166 H~v~Dg~g~~~fl~~wa~~~r~~~~g~~~~~~~~~~~p~--~~~P~~dr~~l~~-----p~~~~~~~~~~~~~~~~~~~~ 238 (467)
|+++||.|+++|+++||++|| |.. ++. ...|++||+.+.. ++....+ ...+...+.
T Consensus 156 H~v~Dg~g~~~Fl~awa~~~r----g~~--------~~~~~~~~p~~dr~~~~p~~~~~~p~~~~~-~~~~~~~~~---- 218 (451)
T 2rkv_A 156 HGAMDMVGQDAVIRLLSKACR----NDP--------FTEEEMTAMNLDRKTIVPYLENYTIGPEVD-HQIVKADVA---- 218 (451)
T ss_dssp TTTCCHHHHHHHHHHHHHHHH----TCC--------CCHHHHHHTTCCSTTSSCCCTTCCCCGGGT-TCBCCTTSC----
T ss_pred hccccHHHHHHHHHHHHHHhc----CCC--------CCccccccccCchhhccccccccCCCcccc-ccccCCCCC----
Confidence 999999999999999999999 864 221 1247788874321 1111110 011111000
Q ss_pred cccCCcCCCCCcEEEEEEeCHHHHHHHHHHHHHhhhhhccCccCccccHHHHHHHHHHHHHHhhc-C-CCCCCeEEEEEE
Q 012242 239 KIIPMKQVNSDLVRMTFEMRPEDITKLRDKIKENILQAGKSAEQLHLSTHVLACAHSFVCLVKAY-G-EETDTNVMFGVA 316 (467)
Q Consensus 239 ~~~~~~~~~~~~~~~~f~f~~~~l~~Lk~~~~~~~~~~~~~~~~~~~St~d~l~A~iW~~~~~ar-~-~~~~~~~~l~~~ 316 (467)
.........++++++|+|++++|++||+.+.+... ....++|+||+|+||+|+|+++|| . ..+++.+.+.++
T Consensus 219 -~~~~~~~~~~~~~~~f~f~~~~i~~LK~~a~~~~~-----~~~~~~St~d~l~A~~Wr~~~~Ar~~~~~~~~~~~l~~~ 292 (451)
T 2rkv_A 219 -GGDAVLTPVSASWAFFTFSPKAMSELKDAATKTLD-----ASTKFVSTDDALSAFIWKSASRVRLERIDGSAPTEFCRA 292 (451)
T ss_dssp -C-------CCEEEEEEEECHHHHHHHHHHHHTTCC-----TTCSCCCHHHHHHHHHHHHHHHHHTTTSCTTSEEEEEEE
T ss_pred -CCCCCCCCCCceEEEEEECHHHHHHHHHHHhhhcc-----CCCCCccHHHHHHHHHHHHHHHHHhccCCCCCceEEEEE
Confidence 00000113467899999999999999999976531 013579999999999999999998 3 567889999999
Q ss_pred ecCCCccCCCCCCCccccccccceeeeecccccccCcHHHHHHHHHHHHHhhcchh-hcchHHHHHHHhhccc---C-CC
Q 012242 317 ADCRSRLDPPLPVNYFGNCVGGQGTVQKASYLMGENGEAFVAEKLSDCIKELKGDV-IEGSEDKFVNVLGMMK---G-EG 391 (467)
Q Consensus 317 vd~R~rl~p~lp~~Y~GN~~~~~~~~~~~~~l~~~~~l~~~A~~IR~ai~~~~~~~-v~~~~~~~~~~~~~~~---~-~~ 391 (467)
||+|+|++ +|++|+||++..+.+.++++||.+ .+|+++|..||+++.+++.++ +++.++|++.. ++.. . +.
T Consensus 293 vd~R~rl~--lP~~y~GN~~~~~~~~~~~~el~~-~~L~~~a~~ir~ai~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 368 (451)
T 2rkv_A 293 VDARPAMG--VSNNYPGLLQNMTYHNSTIGEIAN-ESLGATASRLRSELDPASMRQRTRGLATYLHNN-PDKSNVSLTAD 368 (451)
T ss_dssp EECHHHHT--CCTTCCSCCEEEEEEEEEHHHHHH-SCHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHC-SCCTTBCTTTT
T ss_pred ecccccCC--CCCCCcccceeeecccCcHHHhcc-chHHHHHHHHHHHhcccCchhHHHHHHHHHhcC-CCccccccccc
Confidence 99999998 899999999999999999999986 899999999999999998888 99999999875 3311 1 11
Q ss_pred c-ccceEEEeccCCCcccccccC--CCccceeEEeee-cCCceEEEeecCCCCCcEEEEEEeCHHHHHHHHH--HHHhh
Q 012242 392 L-QQRILSVAGSNRFDVYGSDFG--WGKPKKVEIVSI-DKTGAISLAESGDGSGGIEVGVVLEKHQMEVFAS--LFTDG 464 (467)
Q Consensus 392 ~-~~~~~~vtsw~~~~~~~~DFG--~G~P~~~~~~~~-~~~g~v~i~p~~~~~gg~ev~v~L~~~~m~~l~~--~~~~~ 464 (467)
+ .+.++.+|||+++++|++||| ||||++++.+.. ..+|.++++|+. ++||++|.|+|++++|++|++ +|.++
T Consensus 369 ~~~~~~~~~ssw~~~~~y~~DFG~gwG~P~~v~~~~~~~~~g~~~~~p~~-~~ggi~v~v~L~~~~m~~f~~d~ef~~~ 446 (451)
T 2rkv_A 369 ADPSTSVMLSSWAKVGLWDYDFGLGLGKPETVRRPIFEPVESLMYFMPKK-PDGEFCAALSLRDEDMDRLKADKEWTKY 446 (451)
T ss_dssp CCTTTCEEEEECTTCCGGGCCTTCSSCSCSEEECCBCSCCTTEEEECCCC-TTSCEEEEEEEEHHHHHHHHHCHHHHTT
T ss_pred cCCCCCEEEeccccCCccccccCCCCCCceEEEcCCccCCCCEEEEecCC-CCCCEEEEEEeCHHHHHHHhcCHHHHhh
Confidence 1 245799999999999999998 899999986543 358999999864 478999999999999999987 55544
No 6
>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2
Probab=99.03 E-value=5.1e-08 Score=98.29 Aligned_cols=298 Identities=12% Similarity=0.111 Sum_probs=164.0
Q ss_pred cceecCChhhhcccCCCCccEEEEEecCCCCCCcchhhhHHHHHHHHHHhhhhccCcceeEecCCCCCCcEEEEecCCce
Q 012242 24 SFTLPLTYFDFFWLKFPPVERLFFYQICDLTWDSFSSVILPKLKHSLSLTVHHYLPLAGHIMWPLEAPKPAVYFFPNDGV 103 (467)
Q Consensus 24 ~~~~~LS~lD~~~~~~~yi~~~~~y~~~~~~~~~f~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~~g~~~i~~~~~~gv 103 (467)
...+|||++.+.+....| ...+.|.... .. ..++|++++.+++..+|.|-.+++..++ +.+.+.. +...+
T Consensus 5 ~~~~pls~~Q~~~~~~~y-~~~~~~~l~g-~l------d~~~l~~A~~~lv~rh~~LRt~f~~~~~-~~~q~v~-~~~~~ 74 (422)
T 1q9j_A 5 SVIRKLSHSEEVFAQYEV-FTSMTIQLRG-VI------DVDALSDAFDALLETHPVLASHLEQSSD-GGWNLVA-DDLLH 74 (422)
T ss_dssp SEEEECCHHHHHHHHTTC-EEEEEEEEES-CC------CHHHHHHHHHHHHHHCGGGSEEEEECTT-SSEEEEE-CCSSS
T ss_pred ceeecCCHHHHHHHhcCc-eEEEEEEEec-CC------CHHHHHHHHHHHHHhCccceEEEEecCC-cceeeec-cCCCC
Confidence 568999999886532222 2333444433 22 2789999999999999999999876543 3333322 22222
Q ss_pred E-EEEEEeCCcchhhhccCCCcccccCCCCCCCCCCCCCCCcEEEEEEEeeCCCcEEEEEeeccccccchhhHHHHHHHH
Q 012242 104 S-FTVAESNNADFNHLSSNGIRRAVEFRPLVPEPSISDDKAEVIAIQITLFPNQGFSIGISSHHAVLDGKSSTMFVKSWA 182 (467)
Q Consensus 104 ~-f~~a~~~~~~~~~l~~~~~~~~~~~~~l~p~~~~~~~~~Pll~vQvt~~~~gG~~lg~~~~H~v~Dg~g~~~fl~~wa 182 (467)
. +.+.+.+ +..... ... .. ..+.+ ...|++++.+.. ..++..|.+.+||.++||.|+..|++.|.
T Consensus 75 ~~~~~~d~~-----~~~~~~--~~~--~~---~~~~d-~~~pl~r~~l~~-~~~~~~l~l~~hH~i~Dg~S~~~l~~~l~ 140 (422)
T 1q9j_A 75 SGICVIDGT-----AATNGS--PSG--NA---ELRLD-QSVSLLHLQLIL-REGGAELTLYLHHCMADGHHGAVLVDELF 140 (422)
T ss_dssp CCCEEEC---------------------C---CCCCC-TTTCSEEEEEEC-CSSSCEEEEEEEGGGCCHHHHHHHHHHHH
T ss_pred CceEEEECC-----CCCcch--hhh--cc---cCccC-CCCCcEEEEEEe-cCCCeEEEEEeceEEEchhhHHHHHHHHH
Confidence 2 2222211 100000 000 00 01112 467899888877 67899999999999999999999999999
Q ss_pred HHhhhhhcccccccccccCCCCCCCCccc--cccccCC-------CCcchHhhhhhhhhcccccccccC--CcCCCCCcE
Q 012242 183 YLCKQLQLQEDKNDVVLSSLPLQLTPCFD--RSVIKDP-------KGLDVVYANHWLEFANTRSLKIIP--MKQVNSDLV 251 (467)
Q Consensus 183 ~~~r~~~~g~~~~~~~~~~~p~~~~P~~d--r~~l~~p-------~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 251 (467)
+.++....|... ..++ ..++-+ ....... .... .....||.........++. .........
T Consensus 141 ~~Y~~~~~~~~~-----~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~W~~~l~~~~~lp~~~~~~~~~~~~ 212 (422)
T 1q9j_A 141 SRYTDAVTTGDP-----GPIT--PQPTPLSMEAVLAQRGIRKQGLSGAE-RFMSVMYAYEIPATETPAVLAHPGLPQAVP 212 (422)
T ss_dssp HHHHHHHHSSSC-----CCCC--CCCCCBCHHHHHHHSSCCC-----CT-TSSTTTTCC-------------CCSBCCCC
T ss_pred HHHHHhhccCCC-----CCCC--CCCCCCCHHHHHHhcCCcccccchhh-hhhhhhhcccCCCcccCCCCCCCCCCCCcc
Confidence 999843222221 0111 112111 1100000 0000 0012232210000001110 001112245
Q ss_pred EEEEEeCHHHHHHHHHHHHHhhhhhccCccCccccHHHHHHHHHHHHHHhhcCCCCCCeEEEEEEecCCCccCCCCCCCc
Q 012242 252 RMTFEMRPEDITKLRDKIKENILQAGKSAEQLHLSTHVLACAHSFVCLVKAYGEETDTNVMFGVAADCRSRLDPPLPVNY 331 (467)
Q Consensus 252 ~~~f~f~~~~l~~Lk~~~~~~~~~~~~~~~~~~~St~d~l~A~iW~~~~~ar~~~~~~~~~l~~~vd~R~rl~p~lp~~Y 331 (467)
...+.++++..++|++.|.+. .+|.+.++.|.+-..+.|-+. .......+.++++.|....|+++..=
T Consensus 213 ~~~~~l~~~~~~~l~~~a~~~-----------~~t~~~~l~aa~~~~l~r~~~-~~~~~v~~g~~~~~R~~~~~~~~~~~ 280 (422)
T 1q9j_A 213 VTRLWLSKQQTSDLMAFGREH-----------RLSLNAVVAAAILLTEWQLRN-TPHVPIPYVYPVDLRFVLAPPVAPTE 280 (422)
T ss_dssp EEEECCCHHHHHHHHHHHTTT-----------TCCHHHHHHHHHHHHHHHHHT-CSSCCEEEEEEEETTTTSSSCCCTTT
T ss_pred ceEEEeCHHHHHHHHHHHHHh-----------CCCHHHHHHHHHHHHHHhccc-CCCceEEEeeeeecccccCCCCChhh
Confidence 678899999999999887543 489999999986666665422 23567899999999998765543111
Q ss_pred cccccccceeeeecccccccCcHHHHHHHHHHHHHhh
Q 012242 332 FGNCVGGQGTVQKASYLMGENGEAFVAEKLSDCIKEL 368 (467)
Q Consensus 332 ~GN~~~~~~~~~~~~~l~~~~~l~~~A~~IR~ai~~~ 368 (467)
+.|.+.+....+++. .+.++.+++..+++.+.+.
T Consensus 281 ~~~~vG~f~n~lp~~---~~~~~~~~l~~v~~~~~~~ 314 (422)
T 1q9j_A 281 ATNLLGAASYLAEIG---PNTDIVDLASDIVATLRAD 314 (422)
T ss_dssp BSCCEEEEEEEECCC---SSCCHHHHHHHHHHHHHHH
T ss_pred hhhhheeeeeeeecc---CCCCHHHHHHHHHHHHHHH
Confidence 233333332333332 1256788888888877764
No 7
>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis}
Probab=98.85 E-value=8.5e-06 Score=84.52 Aligned_cols=290 Identities=12% Similarity=0.069 Sum_probs=165.4
Q ss_pred cceecCChhhhcc-------c--CCCCccEEEEEecCCCCCCcchhhhHHHHHHHHHHhhhhccCcceeEecCCCCCCcE
Q 012242 24 SFTLPLTYFDFFW-------L--KFPPVERLFFYQICDLTWDSFSSVILPKLKHSLSLTVHHYLPLAGHIMWPLEAPKPA 94 (467)
Q Consensus 24 ~~~~~LS~lD~~~-------~--~~~yi~~~~~y~~~~~~~~~f~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~~g~~~ 94 (467)
...+|||+.-+.+ + ..+.+...+-++. .. ..++|++++.+++...|.|--++...+ |.+.
T Consensus 94 ~~~~pls~~Q~~~~~~~~~~~~~~~y~~~~~~~l~g---~l------d~~~l~~A~~~lv~rh~~LRt~f~~~~--~~~~ 162 (520)
T 2jgp_A 94 QAYYPVSSAQKRMYILDQFEGVGISYNMPSTMLIEG---KL------ERTRVEAAFQRLIARHESLRTSFAVVN--GEPV 162 (520)
T ss_dssp CSSEECCHHHHHHHHHHHHTCCTTTTBCCEEEEEEE---CC------CHHHHHHHHHHHHHHCGGGGEEEEEET--TEEE
T ss_pred CCCCCCCHHHHHHHHHHhcCCCCCcccceEEEEECC---CC------CHHHHHHHHHHHHHHhHhheeEEEeeC--CEEE
Confidence 5678999875432 1 1112333333333 22 388999999999999999988887532 4332
Q ss_pred EEEecCCceEEEEEEeCCcchhhhccCCCcccccCCCCCCCCCCCCCCCcEEEEEEEeeCCCcEEEEEeeccccccchhh
Q 012242 95 VYFFPNDGVSFTVAESNNADFNHLSSNGIRRAVEFRPLVPEPSISDDKAEVIAIQITLFPNQGFSIGISSHHAVLDGKSS 174 (467)
Q Consensus 95 i~~~~~~gv~f~~a~~~~~~~~~l~~~~~~~~~~~~~l~p~~~~~~~~~Pll~vQvt~~~~gG~~lg~~~~H~v~Dg~g~ 174 (467)
-...+...+.+.+.+.+...+.++.... .. | + .-...|++++.+-....+...|.+.+||.++||.|+
T Consensus 163 q~v~~~~~~~~~~~~~~~~~~~~~~~~~------~~---~-f--dl~~~pl~r~~l~~~~~~~~~l~~~~HH~i~Dg~S~ 230 (520)
T 2jgp_A 163 QNIHEDVPFALAYSEVTEEEARELVSSL------VQ---P-F--DLEVAPLIRVSLLKIGEDRYVLFTDMHHSISDGVSS 230 (520)
T ss_dssp EEECSCCCCCCEEEECCHHHHHHHHHHT------CC---C-C--CTTSSCCEEEEEEEEETTEEEEEEEEBGGGCCHHHH
T ss_pred EEECCCCCCceEEEeCCHHHHHHHHHHh------cC---C-C--CCCCCcceeEEEEEEcCCcEEEEEEccceeecHhHH
Confidence 2222222233322222101111111100 00 0 1 113568888888777667899999999999999999
Q ss_pred HHHHHHHHHHhhhhhcccccccccccCCCCCCCCcccccc-cc-CCCCcchHhhhhhhhhc---ccccccccCC---cCC
Q 012242 175 TMFVKSWAYLCKQLQLQEDKNDVVLSSLPLQLTPCFDRSV-IK-DPKGLDVVYANHWLEFA---NTRSLKIIPM---KQV 246 (467)
Q Consensus 175 ~~fl~~wa~~~r~~~~g~~~~~~~~~~~p~~~~P~~dr~~-l~-~p~~~~~~~~~~~~~~~---~~~~~~~~~~---~~~ 246 (467)
..|++.+.+.++ |.. +|+...++-|-.. .. ............||... ......++.. +..
T Consensus 231 ~~l~~el~~~Y~----~~~--------l~~~~~~~~d~~~~~~~~~~~~~~~~~~~yW~~~l~~~~~~~~lp~~~~~~~~ 298 (520)
T 2jgp_A 231 GILLAEWVQLYQ----GDV--------LPELRIQYKDFAVWQQEFSQSAAFHKQEAYWLQTFADDIPVLNLPTDFTRPST 298 (520)
T ss_dssp HHHHHHHHHHHT----TCC--------CCCCSCCHHHHHHHHHHHTTSHHHHHHHHHHHHHTSSCCCCCCCCCSSCCCSS
T ss_pred HHHHHHHHHHHc----cCC--------CCCCCCCHHHHHHHHHHhhcChhhHHHHHHHHHHhCCCCCcCCCCCCCCCCCC
Confidence 999999999998 643 2211112111000 00 00000001112233210 0000111110 111
Q ss_pred -CCCcEEEEEEeCHHHHHHHHHHHHHhhhhhccCccCccccHHHHHHHHHHHHHHhhcCCCCCCeEEEEEEecCCCccCC
Q 012242 247 -NSDLVRMTFEMRPEDITKLRDKIKENILQAGKSAEQLHLSTHVLACAHSFVCLVKAYGEETDTNVMFGVAADCRSRLDP 325 (467)
Q Consensus 247 -~~~~~~~~f~f~~~~l~~Lk~~~~~~~~~~~~~~~~~~~St~d~l~A~iW~~~~~ar~~~~~~~~~l~~~vd~R~rl~p 325 (467)
........+.++.+..++|++.|.+. .+|.+.++.|.+-..+.+-.+ .....+.++++.|.. +
T Consensus 299 ~~~~~~~~~~~l~~~~~~~l~~~a~~~-----------~~T~~~~l~aa~a~~L~~~~~---~~dv~~g~~~~gR~~--~ 362 (520)
T 2jgp_A 299 QSFAGDQCTIGAGKALTEGLHQLAQAT-----------GTTLYMVLLAAYNVLLAKYAG---QEDIIVGTPITGRSH--A 362 (520)
T ss_dssp CCCBEEEEEEECCHHHHHHHHHHHHHH-----------TCCHHHHHHHHHHHHHHHHHT---CSCEEEEEEECCCCS--G
T ss_pred CCCCccEEEEeCCHHHHHHHHHHHHHc-----------CCCHHHHHHHHHHHHHHHhcC---CCCeEEEeccCCCCc--h
Confidence 12345678899999999999988764 388899998875555554433 467899999999975 2
Q ss_pred CCCCCccccccccceeeeecccccccCcHHHHHHHHHHHHHhh
Q 012242 326 PLPVNYFGNCVGGQGTVQKASYLMGENGEAFVAEKLSDCIKEL 368 (467)
Q Consensus 326 ~lp~~Y~GN~~~~~~~~~~~~~l~~~~~l~~~A~~IR~ai~~~ 368 (467)
--++-+|+++.......... .+.++.++...+++.+.+.
T Consensus 363 -~~~~~vG~f~n~lplr~~~~---~~~~~~~~l~~v~~~~~~~ 401 (520)
T 2jgp_A 363 -DLEPIVGMFVNTLAMRNKPQ---REKTFSEFLQEVKQNALDA 401 (520)
T ss_dssp -GGTTCCSCCCEEEEEEECCC---TTSBHHHHHHHHHHHHHHH
T ss_pred -hhhccEEeeeeeeeEEecCC---CCCCHHHHHHHHHHHHHHH
Confidence 23556777766555554433 2367888888888887764
No 8
>1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2
Probab=98.80 E-value=1.8e-05 Score=79.86 Aligned_cols=257 Identities=12% Similarity=0.028 Sum_probs=149.7
Q ss_pred HHHHHHHHHHhhhhccCcceeEecCCCCCCcEEEEecCCceEEEEEEeCCcc-----hhhhccCCCcccccCCCCCCCCC
Q 012242 63 LPKLKHSLSLTVHHYLPLAGHIMWPLEAPKPAVYFFPNDGVSFTVAESNNAD-----FNHLSSNGIRRAVEFRPLVPEPS 137 (467)
Q Consensus 63 ~~~L~~sL~~~L~~~p~LaGrl~~~~~~g~~~i~~~~~~gv~f~~a~~~~~~-----~~~l~~~~~~~~~~~~~l~p~~~ 137 (467)
.++|++++.+++..+|.|--++... +| .+. +...+.+.+.+..... +.++.... .-.. +
T Consensus 35 ~~~L~~A~~~lv~rh~~LRt~f~~~--~~--~v~--~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-----~~~~----f- 98 (436)
T 1l5a_A 35 TTLLLRALHLTVSEIDLFRARFSAQ--GE--LYW--HPFSPPIDYQDLSIHLEAEPLAWRQIEQD-----LQRS----S- 98 (436)
T ss_dssp HHHHHHHHHHHHHTCGGGGEEECTT--CC--EEE--CSSCCCCEEEECTTCTTHHHHHHHHHHHH-----HTSC----C-
T ss_pred HHHHHHHHHHHHHHhheeEEEEEec--CC--eEC--CCcCCCccEEeCCCCCCHHHHHHHHHHHH-----hcCC----C-
Confidence 8899999999999999998887653 24 332 2233333333322010 11111000 0000 1
Q ss_pred CCCCCCcEEEEEEEeeCCCcEEEEEeeccccccchhhHHHHHHHHHHhhhhhcccccccccccCCCCCCCCccc-----c
Q 012242 138 ISDDKAEVIAIQITLFPNQGFSIGISSHHAVLDGKSSTMFVKSWAYLCKQLQLQEDKNDVVLSSLPLQLTPCFD-----R 212 (467)
Q Consensus 138 ~~~~~~Pll~vQvt~~~~gG~~lg~~~~H~v~Dg~g~~~fl~~wa~~~r~~~~g~~~~~~~~~~~p~~~~P~~d-----r 212 (467)
.-...|++++.+-....+...|.+.+||.++||.|+..|++.+.+.+.....|.. .+....++-| +
T Consensus 99 -dl~~~pl~r~~l~~~~~~~~~l~~~~HH~i~Dg~S~~~l~~~l~~~Y~~~~~g~~--------~~~~~~~~~~~~~~~~ 169 (436)
T 1l5a_A 99 -TLIDAPITSHQVYRLSHSEHLIYTRAHHIVLDGYGMMLFEQRLSQHYQSLLSGQT--------PTAAFKPYQSYLEEEA 169 (436)
T ss_dssp -CCBTSCSCEEEEEEEETTEEEEEEEEETTTCCHHHHHHHHHHHHHHHHHHHHTCC--------CCCCCCCHHHHHHHHH
T ss_pred -CcCCCCCeEEEEEEEcCCEEEEEEeehhheecHhHHHHHHHHHHHHHHHHhcCCC--------CCCCccCHHHHHHHHH
Confidence 1134688888887776688999999999999999999999999999983222332 1111111111 0
Q ss_pred ccccCCCCcchHhhhhhhhhc---ccccccccCCcC-CCCCcEEEEEEeCHHHHHHHHHHHHHhhhhhccCccCccccHH
Q 012242 213 SVIKDPKGLDVVYANHWLEFA---NTRSLKIIPMKQ-VNSDLVRMTFEMRPEDITKLRDKIKENILQAGKSAEQLHLSTH 288 (467)
Q Consensus 213 ~~l~~p~~~~~~~~~~~~~~~---~~~~~~~~~~~~-~~~~~~~~~f~f~~~~l~~Lk~~~~~~~~~~~~~~~~~~~St~ 288 (467)
..+... .. .....||... .+....++.... .........+.++.+..++|++.|... .+|.+
T Consensus 170 ~~~~~~-~~--~~~~~~W~~~l~~~~~~~~lp~~~~~~~~~~~~~~~~l~~~~~~~l~~~a~~~-----------~~t~~ 235 (436)
T 1l5a_A 170 AYLTSH-RY--WQDKQFWQGYLREAPDLTLTSATYDPQLSHAVSLSYTLNSQLNHLLLKLANAN-----------QIGWP 235 (436)
T ss_dssp HHHTSH-HH--HHHHHHHHHHHHTSCCCCBCCTTCCGGGCCEEEEEEECCHHHHHHHHHHHHHT-----------TCCHH
T ss_pred HhhccH-hH--HHHHHHHHHHhcCCCCcccCCCCCCCCcccceeeEEecCHHHHHHHHHHHHHh-----------CCCHH
Confidence 111111 00 1111222210 000011111011 112345778999999999999988764 48899
Q ss_pred HHHHHHHHHHHHhhcCCCCCCeEEEEEEecCCCccCCCCCCCccccccccceeeeecccccccCcHHHHHHHHHHHHHhh
Q 012242 289 VLACAHSFVCLVKAYGEETDTNVMFGVAADCRSRLDPPLPVNYFGNCVGGQGTVQKASYLMGENGEAFVAEKLSDCIKEL 368 (467)
Q Consensus 289 d~l~A~iW~~~~~ar~~~~~~~~~l~~~vd~R~rl~p~lp~~Y~GN~~~~~~~~~~~~~l~~~~~l~~~A~~IR~ai~~~ 368 (467)
.++.|.+-..+.+-. . ....+.++++.|.. + --++-+|+++.......... .+.++.+++..+++.+.+.
T Consensus 236 ~~l~aa~~~~L~~~~---g-~dv~ig~~~~~R~~--~-~~~~~vG~f~n~lplr~~~~---~~~t~~~~l~~v~~~~~~~ 305 (436)
T 1l5a_A 236 DALVALCALYLESAE---P-DAPWLWLPFMNRWG--S-VAANVPGLMVNSLPLLRLSA---QQTSLGNYLKQSGQAIRSL 305 (436)
T ss_dssp HHHHHHHHHHHHHHS---T-TCCEEEEEECCCTT--S-GGGGSCSCCCEEEEEECCCC---TTCBHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhh---C-CceEEeeecccCCC--h-HHhcCcceEEEEEEEEEecC---CCCCHHHHHHHHHHHHHHH
Confidence 999887555554443 3 67899999999965 2 23556676665554444333 2357899999999888775
No 9
>4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus}
Probab=98.64 E-value=2.3e-06 Score=88.27 Aligned_cols=294 Identities=9% Similarity=-0.077 Sum_probs=163.9
Q ss_pred cceecCChhhhccc-------CCCCccEEEEEecCCCCCCcchhhhHHHHHHHHHHhhhhccCcceeEecCCCCCCcEEE
Q 012242 24 SFTLPLTYFDFFWL-------KFPPVERLFFYQICDLTWDSFSSVILPKLKHSLSLTVHHYLPLAGHIMWPLEAPKPAVY 96 (467)
Q Consensus 24 ~~~~~LS~lD~~~~-------~~~yi~~~~~y~~~~~~~~~f~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~~g~~~i~ 96 (467)
...+|||+.-+.+. ... ....+.|+... .. ..++|++++.+++..+|.|--++...+ |.+. .
T Consensus 11 ~~~~Pls~~Q~~~~~~~~~~~~~~-y~~~~~~~l~g-~l------d~~~L~~A~~~lv~rh~~LRt~f~~~~--~~~~-~ 79 (493)
T 4hvm_A 11 PGLRRASFLQRGAWRWLREAPPAA-AFAARGLLGSG-RI------DDDRLAAAADEVLDAFPLLRVNFVDDD--GLWM-R 79 (493)
T ss_dssp -CEEECCHHHHHHHHHHTTSCGGG-GEEEEEEEEES-SC------CHHHHHHHHHHHHHHCGGGGEEEEESS--SEEE-E
T ss_pred CCCCCCCHHHHHHHHHHhhCCCCc-ceeEEEEEEeC-CC------CHHHHHHHHHHHHHhchhceeEEEccC--CEEE-E
Confidence 56889998765321 111 12334455443 33 389999999999999999988887643 4544 4
Q ss_pred EecCCceEEEEEEeCCcch--hhhccCCCcccccCCCCCCCCCCCCCCCcEEEEEEEeeCCCcEEEEEeeccccccchhh
Q 012242 97 FFPNDGVSFTVAESNNADF--NHLSSNGIRRAVEFRPLVPEPSISDDKAEVIAIQITLFPNQGFSIGISSHHAVLDGKSS 174 (467)
Q Consensus 97 ~~~~~gv~f~~a~~~~~~~--~~l~~~~~~~~~~~~~l~p~~~~~~~~~Pll~vQvt~~~~gG~~lg~~~~H~v~Dg~g~ 174 (467)
..+.. +.+.+.+.....- +++.... ....-..+ .-...|++++.+.....+...|.+.+||+++||.|+
T Consensus 80 v~~~~-~~~~~~d~~~~~~~~~~~~~~~--~~~~~~~f------dl~~~pl~r~~l~~~~~~~~~l~l~~HH~i~Dg~S~ 150 (493)
T 4hvm_A 80 TRENA-DALVRSDLRGHPDPQARCVELL--RADRDRPT------DPERDPLVRLHLVRLSETDVVLGVVAHQMLLDARSR 150 (493)
T ss_dssp ECSCC-CCEEEEECTTSSSHHHHHHHHH--HHHHSSCC------CTTTSCSEEEEEEECSSSEEEEEEEEETTTCCHHHH
T ss_pred ecCCC-CCceEEECCCCCchHHHHHHHH--HHHhcCCC------CCCCCCeEEEEEEEECCCcEEEEEecchhhccHHHH
Confidence 33333 5555555320110 1111000 00000011 113568898888887667789999999999999999
Q ss_pred HHHHHHHHHHhhhhhcccccccccccCCCCCCCCcccccccc-C--C-CCcchHhhhhhhhhc-ccccccccCCcCCCCC
Q 012242 175 TMFVKSWAYLCKQLQLQEDKNDVVLSSLPLQLTPCFDRSVIK-D--P-KGLDVVYANHWLEFA-NTRSLKIIPMKQVNSD 249 (467)
Q Consensus 175 ~~fl~~wa~~~r~~~~g~~~~~~~~~~~p~~~~P~~dr~~l~-~--p-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 249 (467)
..+++.+.+.+. |.. .+ .++.|-.... . . ..........||... ..... +...+.....
T Consensus 151 ~~l~~~l~~~Y~----g~~--------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~l~~~~~-l~~~~~~~~~ 214 (493)
T 4hvm_A 151 YMVLGAVWQAYY----GRF--------RP---AQYRDFAEVADFHPLDRETVRVARHRWWSRRLPALPV-RGGDGGPVGP 214 (493)
T ss_dssp HHHHHHHHHHHT----TCC--------CG---GGSBCGGGTTTCCTTCSHHHHHHHHHHHHHHGGGSCC-CC-------C
T ss_pred HHHHHHHHHHhC----CCC--------CC---cCHHHHHHHHhhhhcccChhhHHHHHHHHHhccCCCC-CCCCCCCCCC
Confidence 999999999997 764 11 1211110000 1 0 000011112233210 00000 1110111122
Q ss_pred cEEEEEEeCHHHHHHHHHHHHHhhhhhccCccCcccc--HHHHHHHHHHHHHHhhcC-C-------CCCCeEEEEEEecC
Q 012242 250 LVRMTFEMRPEDITKLRDKIKENILQAGKSAEQLHLS--THVLACAHSFVCLVKAYG-E-------ETDTNVMFGVAADC 319 (467)
Q Consensus 250 ~~~~~f~f~~~~l~~Lk~~~~~~~~~~~~~~~~~~~S--t~d~l~A~iW~~~~~ar~-~-------~~~~~~~l~~~vd~ 319 (467)
.....+.++.+..++|++.|.+. .+| .+.++.|.+-..+.+-+. . .......+.++++.
T Consensus 215 ~~~~~~~l~~~~~~~l~~~a~~~-----------~vt~~~~~~l~aa~a~~L~~~~~~~~~~~~~~~g~~dv~~g~~~~g 283 (493)
T 4hvm_A 215 PETSRLRVPGSRWQALTEPGGPL-----------GGNGSLAMAALTAWWLWTQGAGTGTDTGAGTGTGKDSLYLSTEVDL 283 (493)
T ss_dssp CEEEEEEEEHHHHHHHHCC-----------------CHHHHHHHHHHHHHHHC----------------CEEEEEEEEEH
T ss_pred CeeEEEEcCHHHHHHHHHHHHHc-----------CCCchHHHHHHHHHHHHHHHhhhcccccccCcCCCCCEEEEeeccC
Confidence 56788999999999999877653 478 999999976555554410 0 23568999999999
Q ss_pred CCccCCCCCCCccccccccceeeeecccccccCcHHHHHHHHHHHHHhh
Q 012242 320 RSRLDPPLPVNYFGNCVGGQGTVQKASYLMGENGEAFVAEKLSDCIKEL 368 (467)
Q Consensus 320 R~rl~p~lp~~Y~GN~~~~~~~~~~~~~l~~~~~l~~~A~~IR~ai~~~ 368 (467)
|.. +--++.+|+++.........+... +.++.+++..+++.+.+.
T Consensus 284 R~~---~~~~~~vG~f~n~lplr~~~~~~~-~~t~~~~l~~v~~~~~~~ 328 (493)
T 4hvm_A 284 RDH---LQLGSVVGPLTDRVVFGVDLTGLR-EPSFRDLMSRTQAGFLDA 328 (493)
T ss_dssp HHH---TTCCSBCSCCEEEEEEEEECTTCS-SCBHHHHHHHHHHHHHHH
T ss_pred CCC---cchhcCeEeeeceeEEEEecCCCc-CCCHHHHHHHHHHHHHHH
Confidence 965 234567787776665555544321 267888888888887764
No 10
>2xhg_A Tyrocidine synthetase A; isomerase, nonribosomal peptide synthesis, cofactor-independ epimerization; 1.50A {Brevibacillus brevis}
Probab=98.49 E-value=7.2e-05 Score=76.14 Aligned_cols=304 Identities=10% Similarity=0.046 Sum_probs=167.8
Q ss_pred cceecCChhhhccc-----CCCCccEEEEEecCCCCCCcchhhhHHHHHHHHHHhhhhccCcceeEecCCCCCCcEEEEe
Q 012242 24 SFTLPLTYFDFFWL-----KFPPVERLFFYQICDLTWDSFSSVILPKLKHSLSLTVHHYLPLAGHIMWPLEAPKPAVYFF 98 (467)
Q Consensus 24 ~~~~~LS~lD~~~~-----~~~yi~~~~~y~~~~~~~~~f~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~~g~~~i~~~ 98 (467)
...+|||+..+++. ........+.|+... .. ..++|+++|.+++...+.|--++...+ |.+.-...
T Consensus 15 ~~~~pls~~Q~~~~~~~~~~~~~y~~~~~~~l~g-~l------d~~~L~~Al~~lv~rh~~LRt~f~~~~--~~~~q~v~ 85 (466)
T 2xhg_A 15 AGNVPLTPIQKWFFGKNFTNTGHWNQSSVLYRPE-GF------DPKVIQSVMDKIIEHHDALRMVYQHEN--GNVVQHNR 85 (466)
T ss_dssp CEECCCCHHHHHHHHTTCTTTTCBEEEEEEEETT-CC------CHHHHHHHHHHHHHHSGGGGEEEECGG--GCCEEEEC
T ss_pred CCCCCCCHHHHHHHhCCCCCcCcceeEEEEEcCC-CC------CHHHHHHHHHHHHHhChHhheEEecCC--Cceeeecc
Confidence 66889998876321 111122344555544 33 388999999999999999988887543 44433322
Q ss_pred c--CCceEEEEEEeC-CcchhhhccCCCcccccCCCCCCCCCCCCCCCcEEEEEEEeeCCCcEEEEEeeccccccchhhH
Q 012242 99 P--NDGVSFTVAESN-NADFNHLSSNGIRRAVEFRPLVPEPSISDDKAEVIAIQITLFPNQGFSIGISSHHAVLDGKSST 175 (467)
Q Consensus 99 ~--~~gv~f~~a~~~-~~~~~~l~~~~~~~~~~~~~l~p~~~~~~~~~Pll~vQvt~~~~gG~~lg~~~~H~v~Dg~g~~ 175 (467)
+ ...+.+.+.+.. ..+.++..... ..... .+..-...|++++.+.... ++-.|-+.+||.++||.|+.
T Consensus 86 ~~~~~~~~~~~~d~~~~~~~~~~~~~~---~~~~~-----~~fdl~~~pl~r~~l~~~~-~~~~l~l~~HH~i~Dg~S~~ 156 (466)
T 2xhg_A 86 GLGGQLYDFFSYNLTAQPDVQQAIEAE---TQRLH-----SSMNLQEGPLVKVALFQTL-HGDHLFLAIHHLVVDGISWR 156 (466)
T ss_dssp CSSSCCCEEEEEECTTCSCHHHHHHHH---HHHHH-----TTCCTTTCCCEEEEEEEET-TEEEEEEEEEGGGCCHHHHH
T ss_pred ccccccceeEEEecCCcccHHHHHHHH---HHHHH-----hccCCCCCCeEEEEEEEcC-CCCEEEEEeeeeeechhhHH
Confidence 2 123444444322 01111110000 00000 0011135688998888885 44457799999999999999
Q ss_pred HHHHHHHHHhhhhhcccccccccccCCCCCCCCccc-----cccccCCC-CcchHhhhhhhhhcccccccccCC---cC-
Q 012242 176 MFVKSWAYLCKQLQLQEDKNDVVLSSLPLQLTPCFD-----RSVIKDPK-GLDVVYANHWLEFANTRSLKIIPM---KQ- 245 (467)
Q Consensus 176 ~fl~~wa~~~r~~~~g~~~~~~~~~~~p~~~~P~~d-----r~~l~~p~-~~~~~~~~~~~~~~~~~~~~~~~~---~~- 245 (467)
.|++.+.+.++....|.. ..+++...++.| +.....+. .-...++...... .+ ...++.. +.
T Consensus 157 ~l~~el~~~Y~~~~~g~~------~~l~~~~~~y~~~~~~~~~~~~~~~~~~~~~~W~~~l~~-~~-~~~lp~~~~~~~~ 228 (466)
T 2xhg_A 157 ILFEDLATGYAQALAGQA------ISLPEKTDSFQSWSQWLQEYANEADLLSEIPYWESLESQ-AK-NVSLPKDYEVTDC 228 (466)
T ss_dssp HHHHHHHHHHHHHHTTCC------CCCCCCCSCHHHHHHHHHHHTTSHHHHTTHHHHHHHHHH-CC-CCCCCCSSCCSSC
T ss_pred HHHHHHHHHHHHHHcCCC------CCCCCCCCCHHHHHHHHHHHhcCccchhhhHHHHHhhcc-CC-cccCCcccccccc
Confidence 999999999973322332 012111111111 00000100 0011122211110 00 0111110 00
Q ss_pred CCCCcEEEEEEeCHHHHHHHHHHHHHhhhhhccCccCccccHHHHHHHHHHHHHHhhcCCCCCCeEEEEEEecCCCccCC
Q 012242 246 VNSDLVRMTFEMRPEDITKLRDKIKENILQAGKSAEQLHLSTHVLACAHSFVCLVKAYGEETDTNVMFGVAADCRSRLDP 325 (467)
Q Consensus 246 ~~~~~~~~~f~f~~~~l~~Lk~~~~~~~~~~~~~~~~~~~St~d~l~A~iW~~~~~ar~~~~~~~~~l~~~vd~R~rl~p 325 (467)
.........+.++++..++|++.+... ..+|.++++.|.+-..+.+-.+ .....+.++++.|....+
T Consensus 229 ~~~~~~~~~~~l~~~~~~~l~~~~~~~----------~~~t~~~~llaa~~~~l~~~~~---~~dv~ig~~~~gR~~~~~ 295 (466)
T 2xhg_A 229 KQKSVRNMRIRLHPEETEQLLKHANQA----------YQTEINDLLLAALGLAFAEWSK---LAQIVIHLEGHGREDIIE 295 (466)
T ss_dssp BGGGEEEEEEECCHHHHHHHHHTGGGT----------TTCCHHHHHHHHHHHHHHHHHC---CSEEEEEEEECCCCSCST
T ss_pred ccccceEEEEEcCHHHHHHHHHHhHHh----------hCCCHHHHHHHHHHHHHHHHhC---CCceEEEecCCCCCcccc
Confidence 112345678899999999998765432 2488999998876666655443 467899999999976421
Q ss_pred -CCCCCccccccccceeeeecccccccCcHHHHHHHHHHHHHhhc
Q 012242 326 -PLPVNYFGNCVGGQGTVQKASYLMGENGEAFVAEKLSDCIKELK 369 (467)
Q Consensus 326 -~lp~~Y~GN~~~~~~~~~~~~~l~~~~~l~~~A~~IR~ai~~~~ 369 (467)
+--.+-+|+.+........+. .+.++.+++..|++.+..+.
T Consensus 296 ~~~~~~~vG~f~n~lplr~~~~---~~~~~~~~l~~v~~~~~~~~ 337 (466)
T 2xhg_A 296 QANVARTVGWFTSQYPVLLDLK---QTAPLSDYIKLTKENMRKIP 337 (466)
T ss_dssp TCCCTTCCSCCCEEEEEEEECS---CCCSHHHHHHHHHHHHHHSG
T ss_pred CCCccccccceeeeccEEEecC---CCCCHHHHHHHHHHHHHhCc
Confidence 123456677665555444433 22579999999999988763
No 11
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=98.34 E-value=0.00011 Score=84.71 Aligned_cols=266 Identities=13% Similarity=0.076 Sum_probs=153.8
Q ss_pred HHHHHHHHHHhhhhccCcceeEecCCCCCCcEEEEecCCceEEEEEEeCCcc-------hhhhccCCCcccccCCCCCCC
Q 012242 63 LPKLKHSLSLTVHHYLPLAGHIMWPLEAPKPAVYFFPNDGVSFTVAESNNAD-------FNHLSSNGIRRAVEFRPLVPE 135 (467)
Q Consensus 63 ~~~L~~sL~~~L~~~p~LaGrl~~~~~~g~~~i~~~~~~gv~f~~a~~~~~~-------~~~l~~~~~~~~~~~~~l~p~ 135 (467)
.+.|++++.+++...+.|--++.....++-..+.. +...+.+.+.+....+ +.++.... .-..
T Consensus 49 ~~~l~~A~~~lv~rH~~LRt~f~~~~~~~p~Q~v~-~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~-----~~~~---- 118 (1304)
T 2vsq_A 49 IKCLEESMNVIMDRYDVFRTVFIHEKVKRPVQVVL-KKRQFHIEEIDLTHLTGSEQTAKINEYKEQD-----KIRG---- 118 (1304)
T ss_dssp HHHHHHHHHHHHHHCGGGGEEEECSSCSSCEEEEE-SCCCCCEEEEECTTSCHHHHHHHHHHHHHHH-----HHHC----
T ss_pred HHHHHHHHHHHHHhhhhceEEEEEcCCCeEEEEEC-CCCCCceEEEECCCCCchhHHHHHHHHHHHH-----hcCC----
Confidence 88999999999999999988887654311233332 2333444443322011 11111100 0000
Q ss_pred CCCCCCCCcEEEEEEEeeCCCcEEEEEeeccccccchhhHHHHHHHHHHhhhhhcccccccccccCCCCCCCCccccc-c
Q 012242 136 PSISDDKAEVIAIQITLFPNQGFSIGISSHHAVLDGKSSTMFVKSWAYLCKQLQLQEDKNDVVLSSLPLQLTPCFDRS-V 214 (467)
Q Consensus 136 ~~~~~~~~Pll~vQvt~~~~gG~~lg~~~~H~v~Dg~g~~~fl~~wa~~~r~~~~g~~~~~~~~~~~p~~~~P~~dr~-~ 214 (467)
+ +-...|++++.+.....+...|.+.+||.++||.|+..+++.+.+.++....|.. ..+++ ..++-|-. .
T Consensus 119 f--dl~~~pl~r~~l~~~~~~~~~l~~~~HHii~DG~S~~~l~~el~~~Y~~~~~g~~------~~l~~-~~~y~d~~~~ 189 (1304)
T 2vsq_A 119 F--DLTRDIPMRAAIFKKAEESFEWVWSYHHIILDGWCFGIVVQDLFKVYNALREQKP------YSLPP-VKPYKDYIKW 189 (1304)
T ss_dssp C--CTTTSCSEEEEEEEEETTEEEEEEEEEGGGCCHHHHHHHHHHHHHHHHHHHTTCC------CCCCC-CCCTHHHHHH
T ss_pred C--CCCCCCcEEEEEEEECCCcEEEEEecCceeechhhHHHHHHHHHHHHHHhhcCCC------CCCCC-cccHHHHHHH
Confidence 1 1135689999988887788999999999999999999999999999983222332 11221 11211110 0
Q ss_pred ccCCCCcchHhhhhhhhhc---ccccccccCCc--C-CCCCcEEEEEEeCHHHHHHHHHHHHHhhhhhccCccCccccHH
Q 012242 215 IKDPKGLDVVYANHWLEFA---NTRSLKIIPMK--Q-VNSDLVRMTFEMRPEDITKLRDKIKENILQAGKSAEQLHLSTH 288 (467)
Q Consensus 215 l~~p~~~~~~~~~~~~~~~---~~~~~~~~~~~--~-~~~~~~~~~f~f~~~~l~~Lk~~~~~~~~~~~~~~~~~~~St~ 288 (467)
+.... . .....||... .+....++... . .........+.++++..++||+.|++. .+|.+
T Consensus 190 ~~~~~-~--~~~~~yW~~~L~~~~~~~~lp~~~~~~~~~~~~~~~~~~l~~~~~~~L~~~a~~~-----------~~T~~ 255 (1304)
T 2vsq_A 190 LEKQD-K--QASLRYWREYLEGFEGQTTFAEQRKKQKDGYEPKELLFSPSEAETKAFTELAKSQ-----------HTTLS 255 (1304)
T ss_dssp HHTSC-H--HHHHHHHHHHHTTCCCCCTTTTTCCCSSCCCCEEEEEECCCHHHHHHHHHHHHHT-----------TCCHH
T ss_pred Hhcch-h--hHHHHHHHHHhCCCCccccCCCCCCccccccCcceEEEecCHHHHHHHHHHHHHc-----------CCCHH
Confidence 11111 1 1111222210 00001111100 1 112345677889999999999988764 37889
Q ss_pred HHHHHHHHHHHHhhcCCCCCCeEEEEEEecCCCccCCCCCCCccccccccceeeeecccccccCcHHHHHHHHHHHHHhh
Q 012242 289 VLACAHSFVCLVKAYGEETDTNVMFGVAADCRSRLDPPLPVNYFGNCVGGQGTVQKASYLMGENGEAFVAEKLSDCIKEL 368 (467)
Q Consensus 289 d~l~A~iW~~~~~ar~~~~~~~~~l~~~vd~R~rl~p~lp~~Y~GN~~~~~~~~~~~~~l~~~~~l~~~A~~IR~ai~~~ 368 (467)
.++.|.+-..+.|-- ......+.++++.|..-.+. -++-+|+.+.....+..++ .+.++.++...+++...+.
T Consensus 256 ~vllaa~a~~L~r~t---g~~dvv~G~pvsgR~~~~~~-~~~~vG~fvntlplr~~~~---~~~s~~~ll~~v~~~~~~a 328 (1304)
T 2vsq_A 256 TALQAVWSVLISRYQ---QSGDLAFGTVVSGRPAEIKG-VEHMVGLFINVVPRRVKLS---EGITFNGLLKRLQEQSLQS 328 (1304)
T ss_dssp HHHHHHHHHHHHHHH---TCSEEEEEEEECCCCTTSTT-GGGCCSSCCEEEEEEEECC---TTCBHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhc---CCCCEEEEEEeCCCCccchh-hhcccccceeEEEEEecCC---CCCcHHHHHHHHHHHHHHh
Confidence 998886444444433 35678999999999753222 2455666655544444333 2367899999999887764
No 12
>3fot_A 15-O-acetyltransferase; fusarium head blight, trichothecene mycotoxin, deoxynivaleno toxin, fusarium graminearum, coenzyme A; 1.75A {Fusarium sporotrichioides} PDB: 3fp0_A*
Probab=98.15 E-value=0.0003 Score=72.66 Aligned_cols=377 Identities=11% Similarity=0.081 Sum_probs=189.0
Q ss_pred hhhHHHHHHHHHHhhhhccCcceeEecCCCCCCcEEEEecC-C--ce------EEEEEEeCCcchhhhcc---------C
Q 012242 60 SVILPKLKHSLSLTVHHYLPLAGHIMWPLEAPKPAVYFFPN-D--GV------SFTVAESNNADFNHLSS---------N 121 (467)
Q Consensus 60 ~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~~g~~~i~~~~~-~--gv------~f~~a~~~~~~~~~l~~---------~ 121 (467)
+++.+.|+.|.-.+--.+|-+|+++..+ +++.....|..- + .+ -|.+.+.+ .+-+|+.. +
T Consensus 72 ~~l~~~lr~AW~~lR~~hP~iA~~v~~d-~~~~~~~~Y~~~~~~~~~~~Wl~~Tf~v~~~~-~t~~e~~~~~~~~r~~~~ 149 (519)
T 3fot_A 72 QNLKEMFELALLDARFEHPECACTVSWD-DEVPAIITYESPESNESARDWARGCIHVQPTA-KSALDLWSEMEEGRAAAN 149 (519)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGGCEEECC-SSSSCEEEEECCSSHHHHHHHHHHHEEEEECS-CCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHhhCCcceeEEeeC-CCCcccEEEecCCCHHHHHHHHHhcEEEeCCC-CCHHHHHHhhhhhhcccc
Confidence 5679999999999999999999999977 334555555421 1 11 25555544 45555411 1
Q ss_pred CCcccccC--CCCCCCCCCCCCCCcEEEEEEEeeCCC--cEEEEEeeccccccchhhHHHHHHHHHHhhhhh-ccccccc
Q 012242 122 GIRRAVEF--RPLVPEPSISDDKAEVIAIQITLFPNQ--GFSIGISSHHAVLDGKSSTMFVKSWAYLCKQLQ-LQEDKND 196 (467)
Q Consensus 122 ~~~~~~~~--~~l~p~~~~~~~~~Pll~vQvt~~~~g--G~~lg~~~~H~v~Dg~g~~~fl~~wa~~~r~~~-~g~~~~~ 196 (467)
..++.... .-+.|. ...+.| + .+ -.-|.+.+||.++||.|...|++.+=+...... .|...
T Consensus 150 ~~~p~~~~~l~~v~~~---~~~~~~--------~-p~~~~~~lv~~~~H~~~DG~g~~~f~~~ll~~L~~~~~~~~~~-- 215 (519)
T 3fot_A 150 DNTPSKSIELFLLSDV---STDSTP--------I-PQDATVEILFHSNHLFWDGIGCRKFVGDLFRLVGSYIGRSDSR-- 215 (519)
T ss_dssp -CCCCCSCEEEEEESS---SSTTSC--------C-CTTCEEEEEEEECGGGCCHHHHHHHHHHHHHHHTTSTTC-CGG--
T ss_pred cCCCccceEEEEEecc---cccccc--------C-CCCceEEEEEEeCceeEchHhHHHHHHHHHHHHHhhhccCCcc--
Confidence 11111100 000110 011111 3 24 567788899999999999999998877776221 11110
Q ss_pred ccccCCC-----CCCCCccccccccCCCC-cchH---hhhhhhhh--cccccccccCCcCCCCCcEEEEEEeCHHHHHHH
Q 012242 197 VVLSSLP-----LQLTPCFDRSVIKDPKG-LDVV---YANHWLEF--ANTRSLKIIPMKQVNSDLVRMTFEMRPEDITKL 265 (467)
Q Consensus 197 ~~~~~~p-----~~~~P~~dr~~l~~p~~-~~~~---~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~f~f~~~~l~~L 265 (467)
....+. ..++|..+ ..+..|.. ...+ ...++... .......++. ...+..-....+.|++++.++|
T Consensus 216 -~~~~~~~g~E~~~L~P~~e-~~~~~p~~~~~~e~~~~~~~~~~~~~~~~~~~~~P~-~~~~~~~~~~~~~ls~~~t~~L 292 (519)
T 3fot_A 216 -EMKKIQWGQEIKNLSPPVV-DSLKLDINTLGSEFDDKCTEYTSALVANYKSRGMKF-QPGLALPRCVIHKLSADESIDI 292 (519)
T ss_dssp -GSCCCCTTTTGGGSCCCTG-GGBSSCGGGCCHHHHHHHHHHHHHHHHHHHSCCSBC-CCCCCCEEEEEEECCHHHHHHH
T ss_pred -CCCcCCCCcccccCCcCHH-HHhCCCCCCCCHHHHHHHHHHHHHhhcCCCcccCCC-CCCCCCcceEEEEcCHHHHHHH
Confidence 000010 01112111 11111211 1000 11111100 0000111211 1111233457889999999999
Q ss_pred HHHHHHhhhhhccCccCccccHHHHHHHHHHHHHHhhcC---CCCCCeEEEEEEecCCCccCCCCCCCccccccccceee
Q 012242 266 RDKIKENILQAGKSAEQLHLSTHVLACAHSFVCLVKAYG---EETDTNVMFGVAADCRSRLDPPLPVNYFGNCVGGQGTV 342 (467)
Q Consensus 266 k~~~~~~~~~~~~~~~~~~~St~d~l~A~iW~~~~~ar~---~~~~~~~~l~~~vd~R~rl~p~lp~~Y~GN~~~~~~~~ 342 (467)
++.|++.. +..+|.+.+|.|.+-.++.+... ........+.++||+|+++.++...+|+|.+.......
T Consensus 293 ~~~ck~~~--------~~g~Tvt~~l~Aa~~~al~~~~~~~~~~~~~~~~~~~pvnlR~~l~~~~~~n~~~~~~~~~~~~ 364 (519)
T 3fot_A 293 VKAVKTRL--------GPGFTISHLTQAAIVLALLDHLKPNDLSDDEVFISPTSVDGRRWLREDIASNFYAMCQTAAVVR 364 (519)
T ss_dssp HHHHHHHT--------CTTCCHHHHHHHHHHHHHHHHC----CCTTCCEEEEEEEECGGGBCHHHHTSCCSCCEEEEEEE
T ss_pred HHHHHhcC--------CCCeeHHHHHHHHHHHHHHhhcCCcccCCCccEEEEeeeeccccCCCcccccccceeeeeeeeE
Confidence 99998862 34589999998776666655321 12234688999999999998766667888877655544
Q ss_pred eec-cc-cccc---C---c--HHHHHHHHHHHHHhh-cchhhcchHHHHH----HHhhccc-CCCcccceEEEeccCCCc
Q 012242 343 QKA-SY-LMGE---N---G--EAFVAEKLSDCIKEL-KGDVIEGSEDKFV----NVLGMMK-GEGLQQRILSVAGSNRFD 406 (467)
Q Consensus 343 ~~~-~~-l~~~---~---~--l~~~A~~IR~ai~~~-~~~~v~~~~~~~~----~~~~~~~-~~~~~~~~~~vtsw~~~~ 406 (467)
.+. .. +... + . +.++++.+++..... +..+++.+--++. ....... .+. ......+||.-.+.
T Consensus 365 v~~i~~~~~~~~~~e~~~~~~~~~~ar~l~~~y~~~~~np~i~~l~~~~k~~~~~l~~~~~~~~~-~~~tp~lSslG~vd 443 (519)
T 3fot_A 365 IENLKSITVSHKDEKELQVRALESACRNIKKSYRQWLENPFLQALGLRVHNFEASYLHAKPIPFE-GEANPLFISDGINE 443 (519)
T ss_dssp ECCGGGGCCCTTSCHHHHHHHHHHHHHHHHHHHHHHHTCTTHHHHHHHHHHHHHHHHHHCSSCCC-SBCCCEEEEEEEGG
T ss_pred ecCccccccccchhhhhhHhHHHHHHHHHHHHhhcccCCchHHHhHHHHHHHHHHHhcccCCCCC-CccCcccccCCccc
Confidence 321 11 1100 0 1 466677777766553 3334443222221 1101111 111 02344556654443
Q ss_pred cc-ccccC---CCcc-ceeEEeee--c-CC-ceEEEeecCCCCCcEEEEEE-----eCHHHHHHHHHHHHhhhc
Q 012242 407 VY-GSDFG---WGKP-KKVEIVSI--D-KT-GAISLAESGDGSGGIEVGVV-----LEKHQMEVFASLFTDGLQ 466 (467)
Q Consensus 407 ~~-~~DFG---~G~P-~~~~~~~~--~-~~-g~v~i~p~~~~~gg~ev~v~-----L~~~~m~~l~~~~~~~~~ 466 (467)
=| .-.+| .|.. ..+.-... . .. ...+-+-+. +|-+.+.++ .+++.|+.|.+.+.+.|.
T Consensus 444 ~~lp~~y~~~~~~~~~~~V~~~~~~~~~~~~~~~~~~~Tf--~g~L~l~~~yn~a~~~~e~v~~~l~~v~~~L~ 515 (519)
T 3fot_A 444 RFIPHEIKQTATGENVLSVESIDFVVNQSLPYLAIRLDSW--RDASTLNIIYNDANYTEAEVQKYLQSIVEFML 515 (519)
T ss_dssp GTSCSEEEETTTTEEEEEEEEEEEEECCCSSSCEEEEEEE--TTEEEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred cccchhhccccCCCCceEEEEEEEEccccCCceEEEEEEE--CCEEEEEEEeccccCCHHHHHHHHHHHHHHHH
Confidence 11 22344 2322 22222211 1 11 222222333 245555554 367999999999988774
No 13
>2kl8_A OR15; structural genomics, PSI-2, protein structure initiative, de novo protein, ferrodoxin fold; NMR {Artificial gene}
Probab=78.00 E-value=1.9 Score=29.94 Aligned_cols=38 Identities=13% Similarity=0.211 Sum_probs=31.8
Q ss_pred hhHHHHHHHHHHhhhhccCcceeEecCCCCCCcEEEEe
Q 012242 61 VILPKLKHSLSLTVHHYLPLAGHIMWPLEAPKPAVYFF 98 (467)
Q Consensus 61 ~~~~~L~~sL~~~L~~~p~LaGrl~~~~~~g~~~i~~~ 98 (467)
+.++.+..+|..++.+-..+||.+...-+++.++|+..
T Consensus 10 ddleafekalkemirqarkfagtvtytldgndleirit 47 (85)
T 2kl8_A 10 DDLEAFEKALKEMIRQARKFAGTVTYTLDGNDLEIRIT 47 (85)
T ss_dssp SSHHHHHHHHHHHHHHHTTTTCEEEEEECSSCEEEEEE
T ss_pred CcHHHHHHHHHHHHHHHHhhcceEEEEecCCeeEEEEe
Confidence 34788889999999999999999987655567999885
No 14
>1q23_A Chloramphenicol acetyltransferase; CAT I, trimer, fusidic acid; HET: FUA; 2.18A {Escherichia coli} SCOP: c.43.1.1 PDB: 1noc_B 1pd5_A* 3u9b_A 3u9f_A*
Probab=74.66 E-value=2.3 Score=38.19 Aligned_cols=44 Identities=23% Similarity=0.341 Sum_probs=33.6
Q ss_pred CcEEEEEEEeeCCCc--EEEEEeeccccccchhhHHHHHHHHHHhh
Q 012242 143 AEVIAIQITLFPNQG--FSIGISSHHAVLDGKSSTMFVKSWAYLCK 186 (467)
Q Consensus 143 ~Pll~vQvt~~~~gG--~~lg~~~~H~v~Dg~g~~~fl~~wa~~~r 186 (467)
.|++.+--..-+.|. +-|++++||.++||.-+..|++.+.+...
T Consensus 168 ~pIi~~G~~~~~~~r~~m~lsls~DHRvvDG~~aa~Fl~~lk~~le 213 (219)
T 1q23_A 168 APVFTMGKYYTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCD 213 (219)
T ss_dssp SCEEEECCCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred eEEEecccEEEECCcEEEEEEEEEEchhhChHHHHHHHHHHHHHHh
Confidence 577765322222233 78899999999999999999999999876
No 15
>3cla_A Type III chloramphenicol acetyltransferase; transferase (acyltransferase); HET: CLM; 1.75A {Escherichia coli} SCOP: c.43.1.1 PDB: 1cla_A* 2cla_A 4cla_A* 1cia_A 1qca_A*
Probab=73.91 E-value=2.4 Score=37.89 Aligned_cols=45 Identities=24% Similarity=0.397 Sum_probs=33.7
Q ss_pred CCcEEEEEEEeeCCCc--EEEEEeeccccccchhhHHHHHHHHHHhh
Q 012242 142 KAEVIAIQITLFPNQG--FSIGISSHHAVLDGKSSTMFVKSWAYLCK 186 (467)
Q Consensus 142 ~~Pll~vQvt~~~~gG--~~lg~~~~H~v~Dg~g~~~fl~~wa~~~r 186 (467)
..|++.+--..-+.|. +-|++++||.++||.-+..|++.+.+...
T Consensus 163 ~~PIi~~G~~~~~~~~~~m~lsls~DHRvvDG~~aa~Fl~~lk~~le 209 (213)
T 3cla_A 163 FAPIITMAKYQQEGDRLLLPLSVQVHHAVCDGFHVARFINRLQELCN 209 (213)
T ss_dssp CSCEEEEECCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHT
T ss_pred cccEEEeeEEEEECCeEEEEEEEEEcccccChHHHHHHHHHHHHHHH
Confidence 4588864322222233 68899999999999999999999998765
No 16
>2i9d_A Chloramphenicol acetyltransferase; structural genomics, PSI- protein structure initiative, midwest center for structural genomics; 2.30A {Bacteroides thetaiotaomicron}
Probab=72.87 E-value=2.6 Score=37.75 Aligned_cols=44 Identities=16% Similarity=0.329 Sum_probs=31.8
Q ss_pred CCcEEEEEEEeeCCCc--EEEEEeeccccccchhhHHHHHHHHHHh
Q 012242 142 KAEVIAIQITLFPNQG--FSIGISSHHAVLDGKSSTMFVKSWAYLC 185 (467)
Q Consensus 142 ~~Pll~vQvt~~~~gG--~~lg~~~~H~v~Dg~g~~~fl~~wa~~~ 185 (467)
..|++.+=-..-+.|. +-|++++||.++||.-+..|++.+.+..
T Consensus 171 ~~PIi~~Gk~~~~~~r~~m~lsls~DHRvvDG~~aa~Fl~~lk~~l 216 (217)
T 2i9d_A 171 NYPLLNAGKAIIREGRLVMPIAMTIHHGFIDGHHLSLFYKKVEDFL 216 (217)
T ss_dssp SSCEEEECCCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHH
T ss_pred eEEEEecceEEEECCcEEEEEEEEecchhhChHHHHHHHHHHHHHh
Confidence 4688753211111233 6889999999999999999999998764
No 17
>3b8k_A PDCE2;, dihydrolipoyllysine-residue acetyltransferase; central beta-sheet surrounded by five alpha-helices; 8.80A {Homo sapiens}
Probab=68.56 E-value=3.5 Score=37.54 Aligned_cols=29 Identities=21% Similarity=0.433 Sum_probs=27.4
Q ss_pred EEEEEeeccccccchhhHHHHHHHHHHhh
Q 012242 158 FSIGISSHHAVLDGKSSTMFVKSWAYLCK 186 (467)
Q Consensus 158 ~~lg~~~~H~v~Dg~g~~~fl~~wa~~~r 186 (467)
+-|++++||.++||.-+..|++.+.+...
T Consensus 204 m~lsls~DHRviDGa~aa~Fl~~lk~~le 232 (239)
T 3b8k_A 204 MSVTLSCDHRVVDGAVGAQWLAEFRKYLE 232 (239)
T ss_dssp EEEEECCCCCSSCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEcceeechHHHHHHHHHHHHHHh
Confidence 78999999999999999999999998875
No 18
>1dpb_A Dihydrolipoyl-transacetylase; dihydrolipoamide acetyltransferase; 2.50A {Azotobacter vinelandii} SCOP: c.43.1.1 PDB: 1dpd_A 1eaa_A 1eab_A* 1eac_A* 1ead_A* 1eae_A* 1eaf_A 1dpc_A
Probab=67.99 E-value=3.8 Score=37.39 Aligned_cols=29 Identities=21% Similarity=0.369 Sum_probs=27.2
Q ss_pred EEEEEeeccccccchhhHHHHHHHHHHhh
Q 012242 158 FSIGISSHHAVLDGKSSTMFVKSWAYLCK 186 (467)
Q Consensus 158 ~~lg~~~~H~v~Dg~g~~~fl~~wa~~~r 186 (467)
+-|+++++|.++||.-+..|++.+.+...
T Consensus 208 m~lsls~DHRviDGa~aa~Fl~~lk~~le 236 (243)
T 1dpb_A 208 LPLSLSYDCRVINGAAAARFTKRLGDLLA 236 (243)
T ss_dssp EEEEEEEETTTSCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEECcccccHHHHHHHHHHHHHHHh
Confidence 67999999999999999999999999876
No 19
>1scz_A E2, dihydrolipoamide succinyltransferase; COA-dependent acyltransferase, CAT-like, alpha and beta (2 L mixed beta-sheeet of 6 strands; 2.20A {Escherichia coli} SCOP: c.43.1.1 PDB: 1e2o_A 1c4t_A
Probab=67.92 E-value=3.9 Score=37.08 Aligned_cols=29 Identities=24% Similarity=0.424 Sum_probs=27.1
Q ss_pred EEEEEeeccccccchhhHHHHHHHHHHhh
Q 012242 158 FSIGISSHHAVLDGKSSTMFVKSWAYLCK 186 (467)
Q Consensus 158 ~~lg~~~~H~v~Dg~g~~~fl~~wa~~~r 186 (467)
+-|+++++|.++||.-+..|++.+.+...
T Consensus 196 m~lsls~DHRviDGa~aa~Fl~~lk~~le 224 (233)
T 1scz_A 196 MYLALSYDHRLIDGRESVGFLVTIKELLE 224 (233)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEcceeechHHHHHHHHHHHHHHh
Confidence 66999999999999999999999999876
No 20
>3rqc_A Probable lipoamide acyltransferase; alpha beta fold; 4.01A {Thermoplasma acidophilum dsm 1728}
Probab=67.74 E-value=3.3 Score=37.25 Aligned_cols=29 Identities=21% Similarity=0.436 Sum_probs=27.0
Q ss_pred EEEEEeeccccccchhhHHHHHHHHHHhh
Q 012242 158 FSIGISSHHAVLDGKSSTMFVKSWAYLCK 186 (467)
Q Consensus 158 ~~lg~~~~H~v~Dg~g~~~fl~~wa~~~r 186 (467)
+-|+++++|.+.||.-+..|++.+.+...
T Consensus 187 m~lsls~DHRviDGa~aa~Fl~~l~~~le 215 (224)
T 3rqc_A 187 MYLSLSCDHRLIDGAVATRFIVDLKKVIE 215 (224)
T ss_dssp CCEEEEEETTTSCHHHHHHHHHHHHHHHT
T ss_pred EEEEEEeccceecHHHHHHHHHHHHHHHh
Confidence 55899999999999999999999999986
No 21
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=66.75 E-value=5.8 Score=31.16 Aligned_cols=37 Identities=16% Similarity=0.266 Sum_probs=31.5
Q ss_pred hHHHHHHHHHHhhhhccCcceeEecCCCCCCcEEEEe
Q 012242 62 ILPKLKHSLSLTVHHYLPLAGHIMWPLEAPKPAVYFF 98 (467)
Q Consensus 62 ~~~~L~~sL~~~L~~~p~LaGrl~~~~~~g~~~i~~~ 98 (467)
.++.|..+|...+.+-..+||.+...-++++++|...
T Consensus 93 dlea~ekalkemirqarkfagtvtytl~gn~l~i~it 129 (170)
T 4hhu_A 93 DLEALEKALKEMIRQARKFAGTVTYTLSGNRLVIVIT 129 (170)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCEEEEEECSSEEEEEEE
T ss_pred cHHHHHHHHHHHHHHHHhhcceEEEEEeCCEEEEEEe
Confidence 4888999999999999999999987655578888875
No 22
>2ii3_A Lipoamide acyltransferase component of branched-C alpha-keto acid dehydrogenase complex...; cubic core, HOMO trimer, oxidized COA-bound form; HET: CAO; 2.17A {Bos taurus} PDB: 2ihw_A* 2ii4_A* 2ii5_A*
Probab=66.28 E-value=4.3 Score=37.50 Aligned_cols=29 Identities=21% Similarity=0.538 Sum_probs=27.0
Q ss_pred EEEEEeeccccccchhhHHHHHHHHHHhh
Q 012242 158 FSIGISSHHAVLDGKSSTMFVKSWAYLCK 186 (467)
Q Consensus 158 ~~lg~~~~H~v~Dg~g~~~fl~~wa~~~r 186 (467)
+-|+++++|.++||.-+..|++.+.+.+.
T Consensus 224 m~lsls~DHRviDGa~aa~Fl~~lk~~Le 252 (262)
T 2ii3_A 224 MNVSWSADHRIIDGATVSRFSNLWKSYLE 252 (262)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred eEEEEEECcceecHHHHHHHHHHHHHHHh
Confidence 56999999999999999999999999876
No 23
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=64.11 E-value=5.8 Score=31.16 Aligned_cols=95 Identities=20% Similarity=0.285 Sum_probs=57.2
Q ss_pred HHHHHHHHHHhhhhccCcceeEecCCCCCCcEEEEecCCceEEEEEEeCCcchhhhccCCCcccccCCCCCCCCCCCCCC
Q 012242 63 LPKLKHSLSLTVHHYLPLAGHIMWPLEAPKPAVYFFPNDGVSFTVAESNNADFNHLSSNGIRRAVEFRPLVPEPSISDDK 142 (467)
Q Consensus 63 ~~~L~~sL~~~L~~~p~LaGrl~~~~~~g~~~i~~~~~~gv~f~~a~~~~~~~~~l~~~~~~~~~~~~~l~p~~~~~~~~ 142 (467)
++.|..+|...+.+-..+||.+...-++++++|... ||+- .--.+|......-...+.
T Consensus 13 lea~ekalkemirqarkfagtvtytl~gn~l~i~it---gvpe-------qvrkelakeaerl~~efn------------ 70 (170)
T 4hhu_A 13 LEALEKALKEMIRQARKFAGTVTYTLSGNRLVIVIT---GVPE-------QVRKELAKEAERLKAEFN------------ 70 (170)
T ss_dssp HHHHHHHHHHHHHHHHHTTCEEEEEEETTEEEEEEE---SCCH-------HHHHHHHHHHHHHHHHHT------------
T ss_pred HHHHHHHHHHHHHHHHhhcceEEEEEeCCEEEEEEe---CCcH-------HHHHHHHHHHHHHHHhcc------------
Confidence 788999999999999999999987655578888875 4421 011233221100001111
Q ss_pred CcEEEEEEEeeCCCcEEEEEeeccccccchhhHHHHHHHHHHhhh
Q 012242 143 AEVIAIQITLFPNQGFSIGISSHHAVLDGKSSTMFVKSWAYLCKQ 187 (467)
Q Consensus 143 ~Pll~vQvt~~~~gG~~lg~~~~H~v~Dg~g~~~fl~~wa~~~r~ 187 (467)
+.||.+....|.=+..+ ++.|--.-.|-+++-+..|+
T Consensus 71 ---i~v~y~imgsgsgvm~i-----~f~gddlea~ekalkemirq 107 (170)
T 4hhu_A 71 ---INVQYQIMGSGSGVMVI-----VFEGDDLEALEKALKEMIRQ 107 (170)
T ss_dssp ---CEEEEEEECTTCCEEEE-----EEECSCHHHHHHHHHHHHHH
T ss_pred ---eEEEEEEEeCCceEEEE-----EEecCcHHHHHHHHHHHHHH
Confidence 45677777543323222 33466667788888888884
No 24
>3mae_A 2-oxoisovalerate dehydrogenase E2 component, dihydrolipamide acetyltransferase; 2-oxoacid dehydrogenases acyltransferase; 2.50A {Listeria monocytogenes}
Probab=60.26 E-value=6.5 Score=36.13 Aligned_cols=29 Identities=21% Similarity=0.332 Sum_probs=27.2
Q ss_pred EEEEEeeccccccchhhHHHHHHHHHHhh
Q 012242 158 FSIGISSHHAVLDGKSSTMFVKSWAYLCK 186 (467)
Q Consensus 158 ~~lg~~~~H~v~Dg~g~~~fl~~wa~~~r 186 (467)
+-|+++++|-+.||.-+..|++.+.+...
T Consensus 210 m~lsLs~DHRviDGa~aa~Fl~~lk~~Le 238 (256)
T 3mae_A 210 VNLCLSIDHRILDGLLAGKFLQAIKANVE 238 (256)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEccccccHHHHHHHHHHHHHHHh
Confidence 45999999999999999999999999987
No 25
>3l60_A Branched-chain alpha-keto acid dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: c.43.1.0
Probab=58.83 E-value=7.1 Score=35.71 Aligned_cols=29 Identities=21% Similarity=0.307 Sum_probs=27.2
Q ss_pred EEEEEeeccccccchhhHHHHHHHHHHhh
Q 012242 158 FSIGISSHHAVLDGKSSTMFVKSWAYLCK 186 (467)
Q Consensus 158 ~~lg~~~~H~v~Dg~g~~~fl~~wa~~~r 186 (467)
+-|+++++|-+.||.-+..|++.+.+...
T Consensus 205 m~lsLs~DHRviDGa~aa~Fl~~lk~~Le 233 (250)
T 3l60_A 205 MTLTCVFDHRVVDGAQVAQFMCELRDLIE 233 (250)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred eEEEEEecccccCHHHHHHHHHHHHHHHh
Confidence 46899999999999999999999999987
No 26
>2xl1_A Arginine attenuator peptide; translation, antibiotic, ribosome, cytomegalovirus; NMR {Neurospora crassa}
Probab=56.22 E-value=8.4 Score=20.75 Aligned_cols=20 Identities=10% Similarity=0.085 Sum_probs=16.5
Q ss_pred CccccHHHHHHHHHHHHHHh
Q 012242 282 QLHLSTHVLACAHSFVCLVK 301 (467)
Q Consensus 282 ~~~~St~d~l~A~iW~~~~~ 301 (467)
++-+++.|-|+-++|+++..
T Consensus 5 psvftsqdylsdhlwralna 24 (26)
T 2xl1_A 5 PSVFTSQDYLSDHLWRALNA 24 (26)
T ss_pred CceeecHHHHHHHHHHHHhc
Confidence 45578899999999998753
No 27
>3dva_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; oxidoreductase, multienzyme complex; HET: TPW; 2.35A {Bacillus stearothermophilus} PDB: 3dv0_I* 3duf_I* 1b5s_A 1lab_A 1lac_A 1w3d_A
Probab=38.73 E-value=6.5 Score=39.08 Aligned_cols=29 Identities=17% Similarity=0.340 Sum_probs=0.0
Q ss_pred EEEEEeeccccccchhhHHHHHHHHHHhh
Q 012242 158 FSIGISSHHAVLDGKSSTMFVKSWAYLCK 186 (467)
Q Consensus 158 ~~lg~~~~H~v~Dg~g~~~fl~~wa~~~r 186 (467)
+-|++++||.++||.-+..|++.+.+.+.
T Consensus 391 m~lsls~DHRviDG~~aa~Fl~~lk~~Le 419 (428)
T 3dva_I 391 LALSLSFDHRMIDGATAQKALNHIKRLLS 419 (428)
T ss_dssp -----------------------------
T ss_pred EEEEEEecccccchHHHHHHHHHHHHHHh
Confidence 35999999999999999999999998875
No 28
>1x93_A Hypothetical protein HP0222; JHP0208, transcription, regula METJ, MNT, PArg, COPG, REPA; NMR {Helicobacter pylori} SCOP: a.43.1.3
Probab=32.73 E-value=83 Score=20.44 Aligned_cols=22 Identities=18% Similarity=0.226 Sum_probs=19.7
Q ss_pred EEEEEeCHHHHHHHHHHHHHhh
Q 012242 252 RMTFEMRPEDITKLRDKIKENI 273 (467)
Q Consensus 252 ~~~f~f~~~~l~~Lk~~~~~~~ 273 (467)
...|+|++++-+.|++.|.++.
T Consensus 3 ~Vs~Y~SkEey~~L~klA~eE~ 24 (55)
T 1x93_A 3 AVSLYFSDEQYQKLEKMANEEE 24 (55)
T ss_dssp EEEEEECHHHHHHHHHHHHHTT
T ss_pred eEEEEecHHHHHHHHHHHHHHH
Confidence 5689999999999999998865
No 29
>3qoq_A Alginate and motility regulator Z; protein-DNA complex, ribbon-helix-helix; HET: DNA; 3.10A {Pseudomonas aeruginosa}
Probab=23.01 E-value=1.6e+02 Score=20.79 Aligned_cols=46 Identities=9% Similarity=0.024 Sum_probs=36.1
Q ss_pred cEEEEEEeCHHHHHHHHHHHHHhhhhhccCccCccccHHHHHHHHHHHHHHhhcCCC
Q 012242 250 LVRMTFEMRPEDITKLRDKIKENILQAGKSAEQLHLSTHVLACAHSFVCLVKAYGEE 306 (467)
Q Consensus 250 ~~~~~f~f~~~~l~~Lk~~~~~~~~~~~~~~~~~~~St~d~l~A~iW~~~~~ar~~~ 306 (467)
...-.+++|.+--++|+..|... ..|.|.-|.+.|-+++.+-..+.
T Consensus 19 ~~kf~LRlP~eL~~~L~~~A~~~-----------grSlNaeIv~~Le~sl~~e~~l~ 64 (69)
T 3qoq_A 19 ADKFVVRLPEGMREQIAEVARSH-----------HRSMNSEIIARLEQSLLQEGALQ 64 (69)
T ss_dssp SEEEEEECCTTHHHHHHHHHHHT-----------TCCHHHHHHHHHHHHHHHHTC--
T ss_pred CCceEEECCHHHHHHHHHHHHHh-----------CCCHHHHHHHHHHHHHHHcCCcc
Confidence 44568999999999999888765 38999999999999887665543
Done!