Your job contains 1 sequence.
>012245
MEMNGSKREENEKMEECKETVVYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGC
GFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVT
EAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRR
KTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGG
EGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRH
SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEG
RVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWG
WNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 012245
(467 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2099986 - symbol:AT3G55580 species:3702 "Arabi... 1382 2.6e-141 1
TAIR|locus:2163986 - symbol:UVR8 "UVB-RESISTANCE 8" speci... 343 5.8e-40 2
ZFIN|ZDB-GENE-070718-6 - symbol:herc2 "hect domain and RL... 288 2.3e-28 3
UNIPROTKB|F1S098 - symbol:HERC1 "Uncharacterized protein"... 291 1.5e-27 3
UNIPROTKB|E2QYQ5 - symbol:HERC1 "Uncharacterized protein"... 291 1.5e-27 3
MGI|MGI:2444156 - symbol:Rccd1 "RCC1 domain containing 1"... 177 1.6e-27 3
UNIPROTKB|F1MNS0 - symbol:HERC1 "Uncharacterized protein"... 291 1.9e-27 3
TAIR|locus:2146142 - symbol:AT5G16040 "AT5G16040" species... 240 3.0e-27 3
UNIPROTKB|Q15751 - symbol:HERC1 "Probable E3 ubiquitin-pr... 288 4.1e-27 3
UNIPROTKB|E1C4H7 - symbol:HERC1 "Uncharacterized protein"... 288 1.1e-26 3
MGI|MGI:1914595 - symbol:Herc4 "hect domain and RLD 4" sp... 280 6.2e-26 2
TAIR|locus:2076889 - symbol:AT3G02510 "AT3G02510" species... 235 7.9e-25 4
RGD|1310971 - symbol:Herc4 "HECT and RLD domain containin... 273 9.4e-25 2
FB|FBgn0031107 - symbol:HERC2 "HECT and RLD domain contai... 249 1.4e-24 3
TAIR|locus:504956339 - symbol:RUG1 "AT5G08710" species:37... 244 2.1e-24 2
UNIPROTKB|Q5GLZ8 - symbol:HERC4 "Probable E3 ubiquitin-pr... 271 2.1e-24 2
RGD|1309901 - symbol:Rccd1 "RCC1 domain containing 1" spe... 190 2.4e-24 2
UNIPROTKB|F1N7C1 - symbol:HERC6 "Uncharacterized protein"... 250 3.2e-24 2
UNIPROTKB|F1NCH3 - symbol:HERC4 "Uncharacterized protein"... 271 3.4e-24 2
UNIPROTKB|E2RFW5 - symbol:HERC4 "Uncharacterized protein"... 267 5.1e-24 2
UNIPROTKB|E2RFV1 - symbol:HERC4 "Uncharacterized protein"... 267 5.2e-24 2
UNIPROTKB|E1BAV2 - symbol:HERC4 "Uncharacterized protein"... 266 6.9e-24 2
UNIPROTKB|J9NWD8 - symbol:HERC1 "Uncharacterized protein"... 291 8.5e-24 2
UNIPROTKB|Q9UII4 - symbol:HERC5 "E3 ISG15--protein ligase... 293 1.3e-23 2
TAIR|locus:2159295 - symbol:RUG3 "RCC1/UVR8/GEF-like 3" s... 238 1.4e-23 2
FB|FBgn0035207 - symbol:CG9153 species:7227 "Drosophila m... 256 6.1e-23 3
RGD|1307803 - symbol:Herc3 "HECT and RLD domain containin... 247 6.4e-23 2
UNIPROTKB|O95199 - symbol:RCBTB2 "RCC1 and BTB domain-con... 286 8.7e-23 1
UNIPROTKB|A2VDP7 - symbol:HERC3 "HERC3 protein" species:9... 241 2.0e-22 2
TAIR|locus:2205794 - symbol:AT1G27060 species:3702 "Arabi... 223 2.9e-22 3
MGI|MGI:1917200 - symbol:Rcbtb2 "regulator of chromosome ... 281 3.5e-22 1
UNIPROTKB|E2RDC2 - symbol:HERC2 "Uncharacterized protein"... 280 3.9e-22 3
TAIR|locus:2076532 - symbol:AT3G02300 "AT3G02300" species... 241 4.1e-22 3
UNIPROTKB|E2RMB0 - symbol:HERC3 "Uncharacterized protein"... 246 4.7e-22 2
RGD|1307989 - symbol:Herc2 "HECT and RLD domain containin... 229 5.4e-22 3
TAIR|locus:2165770 - symbol:AT5G42140 "AT5G42140" species... 265 5.4e-22 2
UNIPROTKB|F1M560 - symbol:Herc2 "Protein Herc2" species:1... 229 5.5e-22 3
UNIPROTKB|F1RW66 - symbol:HERC3 "Uncharacterized protein"... 244 6.0e-22 2
UNIPROTKB|F1NDJ4 - symbol:RCCD1 "Uncharacterized protein"... 160 7.3e-22 2
UNIPROTKB|Q15034 - symbol:HERC3 "Probable E3 ubiquitin-pr... 245 7.7e-22 2
UNIPROTKB|F1RMH6 - symbol:RCCD1 "Uncharacterized protein"... 169 1.0e-21 2
UNIPROTKB|O95714 - symbol:HERC2 "E3 ubiquitin-protein lig... 280 1.0e-21 3
UNIPROTKB|G3V2I3 - symbol:RCCD1 "RCC1 domain-containing p... 176 1.2e-21 2
UNIPROTKB|D4ACN3 - symbol:Herc2 "Protein Herc2" species:1... 279 1.3e-21 3
MGI|MGI:103234 - symbol:Herc2 "hect (homologous to the E6... 279 1.4e-21 3
TAIR|locus:2086253 - symbol:AT3G23270 "AT3G23270" species... 251 1.4e-21 2
UNIPROTKB|G3MX12 - symbol:HERC2 "Uncharacterized protein"... 281 1.4e-21 3
UNIPROTKB|E1B782 - symbol:HERC2 "Uncharacterized protein"... 281 1.5e-21 3
UNIPROTKB|E1BW48 - symbol:HERC2 "Uncharacterized protein"... 275 3.0e-21 3
UNIPROTKB|E1C8K2 - symbol:HERC2 "Uncharacterized protein"... 275 3.0e-21 3
UNIPROTKB|E1B8U7 - symbol:RCCD1 "Uncharacterized protein"... 168 3.3e-21 2
MGI|MGI:1918580 - symbol:Rcbtb1 "regulator of chromosome ... 272 3.7e-21 1
UNIPROTKB|F1N1N9 - symbol:HERC5 "Uncharacterized protein"... 252 7.6e-21 2
TAIR|locus:505006603 - symbol:AT5G12350 "AT5G12350" speci... 271 8.5e-21 2
UNIPROTKB|F1PB99 - symbol:HERC5 "Uncharacterized protein"... 276 8.8e-21 2
UNIPROTKB|E1BKF7 - symbol:RCBTB1 "Uncharacterized protein... 267 1.0e-20 2
UNIPROTKB|Q8NDN9 - symbol:RCBTB1 "RCC1 and BTB domain-con... 268 1.1e-20 1
UNIPROTKB|E1C514 - symbol:HERC3 "Uncharacterized protein"... 267 1.3e-20 2
RGD|1308467 - symbol:Rcbtb1 "regulator of chromosome cond... 267 1.4e-20 1
TAIR|locus:2025277 - symbol:PRAF1 "AT1G76950" species:370... 250 2.1e-20 2
UNIPROTKB|I3LCV3 - symbol:RCBTB1 "Uncharacterized protein... 266 2.2e-20 1
UNIPROTKB|F1PV11 - symbol:RCBTB1 "Uncharacterized protein... 265 2.4e-20 1
MGI|MGI:1914388 - symbol:Herc6 "hect domain and RLD 6" sp... 228 2.5e-20 2
MGI|MGI:1890646 - symbol:Nek8 "NIMA (never in mitosis gen... 259 2.5e-20 2
RGD|1306897 - symbol:Nek8 "NIMA-related kinase 8" species... 258 2.7e-20 2
ZFIN|ZDB-GENE-040426-2216 - symbol:rcc1 "regulator of chr... 202 6.9e-20 2
UNIPROTKB|F1NUG6 - symbol:Gga.50841 "Uncharacterized prot... 263 8.7e-20 1
ZFIN|ZDB-GENE-030131-7951 - symbol:rcbtb1 "regulator of c... 260 9.3e-20 1
UNIPROTKB|Q9N1T2 - symbol:RPGR "X-linked retinitis pigmen... 251 1.7e-19 2
ZFIN|ZDB-GENE-090313-139 - symbol:herc3 "hect domain and ... 236 2.5e-19 2
UNIPROTKB|E1BVG2 - symbol:RCBTB1 "Uncharacterized protein... 256 2.6e-19 2
TAIR|locus:2009739 - symbol:AT1G65920 species:3702 "Arabi... 233 3.2e-19 2
RGD|1306366 - symbol:Herc1 "HECT and RLD domain containin... 254 3.6e-19 2
UNIPROTKB|F1NBC5 - symbol:HERC3 "Uncharacterized protein"... 260 3.8e-19 2
UNIPROTKB|F1RNC5 - symbol:NEK8 "Uncharacterized protein" ... 249 5.3e-19 2
ZFIN|ZDB-GENE-090311-16 - symbol:si:ch211-281g13.4 "si:ch... 257 7.2e-19 1
UNIPROTKB|E1B827 - symbol:NEK8 "Uncharacterized protein" ... 247 9.1e-19 2
DICTYBASE|DDB_G0269934 - symbol:DDB_G0269934 "Ras GTPase ... 248 9.3e-19 2
TAIR|locus:2092190 - symbol:AT3G26100 species:3702 "Arabi... 223 1.0e-18 3
ZFIN|ZDB-GENE-090311-7 - symbol:si:ch211-281g13.5 "si:ch2... 255 1.2e-18 1
UNIPROTKB|I3LT85 - symbol:RCC1 "Uncharacterized protein" ... 247 1.3e-18 1
RGD|1561739 - symbol:Herc6 "HECT and RLD domain containin... 231 1.5e-18 2
UNIPROTKB|Q86SG6 - symbol:NEK8 "Serine/threonine-protein ... 244 1.6e-18 2
ZFIN|ZDB-GENE-090311-56 - symbol:si:ch73-190m4.1 "si:ch73... 254 1.6e-18 1
UNIPROTKB|E2QZC2 - symbol:NEK8 "Uncharacterized protein" ... 244 2.1e-18 2
TAIR|locus:2156233 - symbol:RUG2 "RCC1/UVR8/GEF-like 2" s... 221 3.3e-18 2
UNIPROTKB|F1NAG9 - symbol:NEK9 "Uncharacterized protein" ... 249 3.4e-18 2
TAIR|locus:2079147 - symbol:AT3G47660 "AT3G47660" species... 215 5.9e-18 2
ZFIN|ZDB-GENE-070615-14 - symbol:zgc:163136 "zgc:163136" ... 249 5.9e-18 1
UNIPROTKB|I3L8I2 - symbol:LOC100737658 "Uncharacterized p... 249 6.4e-18 2
UNIPROTKB|I3L5B6 - symbol:LOC100737658 "Uncharacterized p... 249 6.6e-18 2
RGD|1592835 - symbol:Rcc1 "regulator of chromosome conden... 241 6.6e-18 1
MGI|MGI:1344037 - symbol:Rpgr "retinitis pigmentosa GTPas... 242 6.9e-18 2
UNIPROTKB|Q92834 - symbol:RPGR "X-linked retinitis pigmen... 248 7.9e-18 1
UNIPROTKB|F1PBB3 - symbol:HERC6 "Uncharacterized protein"... 239 1.6e-17 3
UNIPROTKB|F1LPM8 - symbol:Herc6 "Protein Herc6" species:1... 229 2.3e-17 2
MGI|MGI:1913989 - symbol:Rcc1 "regulator of chromosome co... 236 2.6e-17 1
UNIPROTKB|Q8IVU3 - symbol:HERC6 "Probable E3 ubiquitin-pr... 239 2.7e-17 2
UNIPROTKB|A7Z018 - symbol:RCC1 "Uncharacterized protein" ... 235 3.4e-17 1
RGD|1307187 - symbol:Nek9 "NIMA-related kinase 9" species... 245 4.0e-17 2
WARNING: Descriptions of 130 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2099986 [details] [associations]
symbol:AT3G55580 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] INTERPRO:IPR000408 Pfam:PF00415
EMBL:CP002686 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:AL132975
HSSP:P18754 IPI:IPI00521720 PIR:T47697 RefSeq:NP_191117.1
UniGene:At.35013 ProteinModelPortal:Q9M2S1 SMR:Q9M2S1 PRIDE:Q9M2S1
EnsemblPlants:AT3G55580.1 GeneID:824723 KEGG:ath:AT3G55580
TAIR:At3g55580 InParanoid:Q9M2S1 OMA:HPIPCIE PhylomeDB:Q9M2S1
ProtClustDB:CLSN2685056 Genevestigator:Q9M2S1 Uniprot:Q9M2S1
Length = 488
Score = 1382 (491.5 bits), Expect = 2.6e-141, P = 2.6e-141
Identities = 261/458 (56%), Positives = 322/458 (70%)
Query: 21 VVYMWGYLPGTSPEKSPILSPIPARLCGG--DSWKDVCGGGCGFALATSESGKLITWGSA 78
VVYMWGYLPG SP++SP++SP+ ++ SWKDV GGGCGFA+AT+ESGKLITWGS
Sbjct: 32 VVYMWGYLPGASPQRSPLMSPVEVKIPPAVESSWKDVSGGGCGFAMATAESGKLITWGST 91
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
DD GQSY+TSGKHGETPEPFPLP E V KA AGWAHCV+VTE +VYTWGWREC+P+ +
Sbjct: 92 DDLGQSYVTSGKHGETPEPFPLPPEVCVQKAEAGWAHCVAVTENQQVYTWGWRECIPTGR 151
Query: 139 V---------TRDFG-SAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREE 188
V R+ S S GK+S+ T + R G E K+R+ S +++
Sbjct: 152 VFGQVDGDSCERNISFSTEQVSSSSQGKKSSGGTSSQV--EGRGGGEPTKKRRISPSKQA 209
Query: 189 SENPASGDEF-FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMXXXXXXXXXXXXXXXXX 247
+EN + D + PCLV+L PGV+I VAAGGRHTL LSD+
Sbjct: 210 AENSSQSDNIDLSALPCLVSLAPGVRIVSVAAGGRHTLALSDIGQVWGWGYGGEGQLGLG 269
Query: 248 SRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDA 307
SR+++V +PH IPC+E ++ GK V SV G+ SYVK+IACGGRHSAV+TD
Sbjct: 270 SRVRLVSSPHPIPCIEPSSYGKATSSGVNMSSVVQCGRVLGSYVKKIACGGRHSAVITDT 329
Query: 308 GALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
GALLTFGWGLYGQCG GST+D+L P+ SSL+ I++E++AAGLWHT C S +G VY FGG
Sbjct: 330 GALLTFGWGLYGQCGQGSTDDELSPTCVSSLLGIRIEEVAAGLWHTTCASSDGDVYAFGG 389
Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
NQFGQLGTG DQAE +PKLLE P LE+ K +SCGARH+AV+T++G+V WGWNKYGQL
Sbjct: 390 NQFGQLGTGCDQAETLPKLLEAPNLENVNVKTISCGARHTAVITDEGRVFCWGWNKYGQL 449
Query: 428 GLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAETT 465
G+GD IDRN P+ V I P+NIACGWWHTLLL + T
Sbjct: 450 GIGDVIDRNAPAEVRIKDCFPKNIACGWWHTLLLGQPT 487
Score = 146 (56.5 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 38/128 (29%), Positives = 64/128 (50%)
Query: 343 VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSC 402
V++IA G H+ I+ G + FG +GQ G G E P + + L R + V+
Sbjct: 313 VKKIACGGRHSAVITDTGALLTFGWGLYGQCGQGSTDDELSPTCVSS--LLGIRIEEVAA 370
Query: 403 GARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV--P-IHGFLPRNIACGWWHTL 459
G H+ + DG V ++G N++GQLG G +P L+ P + + I+CG HT
Sbjct: 371 GLWHTTCASSDGDVYAFGGNQFGQLGTGCDQAETLPKLLEAPNLENVNVKTISCGARHTA 430
Query: 460 LLAETTQI 467
++ + ++
Sbjct: 431 VITDEGRV 438
Score = 38 (18.4 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 12/30 (40%), Positives = 16/30 (53%)
Query: 151 KDSTGKQSALPTEQAPPSDKRAGEEVVKRR 180
K TG SA T P +++ EEVV +R
Sbjct: 6 KLETGGTSAAAT----PKEEKEEEEVVSQR 31
>TAIR|locus:2163986 [details] [associations]
symbol:UVR8 "UVB-RESISTANCE 8" species:3702 "Arabidopsis
thaliana" [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=ISS]
[GO:0009411 "response to UV" evidence=IMP] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0010224 "response to UV-B"
evidence=IEP;IGI] [GO:0000785 "chromatin" evidence=IDA] [GO:0009649
"entrainment of circadian clock" evidence=IMP] [GO:0006007 "glucose
catabolic process" evidence=RCA] [GO:0042803 "protein
homodimerization activity" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005829 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009649 GO:GO:0000785 EMBL:AB007646
GO:GO:0003682 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0010224 eggNOG:COG5184 UniGene:At.49214
EMBL:AF130441 EMBL:AY125497 EMBL:BT000600 IPI:IPI00521473
PIR:T50662 RefSeq:NP_201191.1 PDB:4D9S PDB:4DNU PDB:4DNV PDB:4DNW
PDBsum:4D9S PDBsum:4DNU PDBsum:4DNV PDBsum:4DNW
ProteinModelPortal:Q9FN03 SMR:Q9FN03 DIP:DIP-59667N STRING:Q9FN03
PRIDE:Q9FN03 EnsemblPlants:AT5G63860.1 GeneID:836506
KEGG:ath:AT5G63860 TAIR:At5g63860 HOGENOM:HOG000240817
InParanoid:Q9FN03 OMA:GTLWCWG PhylomeDB:Q9FN03
ProtClustDB:CLSN2686209 Genevestigator:Q9FN03 Uniprot:Q9FN03
Length = 440
Score = 343 (125.8 bits), Expect = 1.5e-33, Sum P(2) = 1.5e-33
Identities = 66/171 (38%), Positives = 102/171 (59%)
Query: 291 VKEIACGGRHSAVVTDAGA-LLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAG 349
+ + CG H+ + +G + ++GWG +G+ GHG+++D P +L I+++QIA G
Sbjct: 69 IVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACG 128
Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
H + +++EG V +G NQ GQLG G + VP+ ++ E R K+V+ GA H+A
Sbjct: 129 DSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQA--FEGIRIKMVAAGAEHTAA 186
Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN-IACGWWHTL 459
+TEDG + WGW +YG LGLGD DR +P V G + +ACGW HT+
Sbjct: 187 VTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTI 237
Score = 324 (119.1 bits), Expect = 5.8e-40, Sum P(2) = 5.8e-40
Identities = 65/179 (36%), Positives = 102/179 (56%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
+K +A G H+A VT+ G L +GWG YG G G D+L P +S ++ +A G
Sbjct: 174 IKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGW 233
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
HT+ +S G +Y +G +++GQLG G + +P LE L + +S G RH+ L
Sbjct: 234 RHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEA--LSNSFISQISGGWRHTMAL 291
Query: 411 TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV--PIHGFLPRNIACGWWHTLLLAETTQI 467
T DG++ WGWNK+GQ+G+G+++D+ P V P + + ++CGW HTL + E +
Sbjct: 292 TSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQ-VSCGWRHTLAVTERNNV 349
Score = 318 (117.0 bits), Expect = 3.6e-39, Sum P(2) = 3.6e-39
Identities = 60/155 (38%), Positives = 93/155 (60%)
Query: 287 GRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQI 346
G + +ACG RH+ V+ +GAL T+GW YGQ GHG D L P +L + + QI
Sbjct: 222 GGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQI 281
Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
+ G HT+ ++ +G++Y +G N+FGQ+G G + + P + P + ++ VSCG RH
Sbjct: 282 SGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFP--DDQKVVQVSCGWRH 339
Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
+ +TE V +WG GQLG+G+S+DRN P ++
Sbjct: 340 TLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKII 374
Score = 275 (101.9 bits), Expect = 2.8e-22, Sum P(2) = 2.8e-22
Identities = 60/173 (34%), Positives = 96/173 (55%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
+K+IACG H VT G + ++G GQ G G T D L P + I+++ +AAG
Sbjct: 122 IKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGA 181
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAEN-VPKLLETPILESKRAKVVSCGARHSAV 409
HT ++ +G +Y +G ++G LG G D+ + VP+ + + ++ +V+CG RH+
Sbjct: 182 EHTAAVTEDGDLYGWGWGRYGNLGLG-DRTDRLVPERVTST--GGEKMSMVACGWRHTIS 238
Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNIP-SLVPIHGFLPRNIACGWWHTLLL 461
++ G + ++GW+KYGQLG GD D IP L + I+ GW HT+ L
Sbjct: 239 VSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMAL 291
Score = 249 (92.7 bits), Expect = 9.2e-19, P = 9.2e-19
Identities = 60/172 (34%), Positives = 84/172 (48%)
Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
I+ G HS + + ++G G GQ GHG D+ P+ S+L Q+ + G HT
Sbjct: 20 ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHT 79
Query: 354 VCISVEG-RVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTE 412
V S G VY +G FG+LG G P L L R K ++CG H +T
Sbjct: 80 VAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTP--LPIKALHGIRIKQIACGDSHCLAVTM 137
Query: 413 DGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
+G+V SWG N+ GQLGLGD+ D +P + G + +A G HT + E
Sbjct: 138 EGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTE 189
Score = 167 (63.8 bits), Expect = 2.3e-17, Sum P(2) = 2.3e-17
Identities = 34/100 (34%), Positives = 53/100 (53%)
Query: 289 SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
S++ +I+ G RH+ +T G L +GW +GQ G G+ DQ P D +V Q++
Sbjct: 276 SFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSC 335
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE 388
G HT+ ++ V+ +G GQLG G N PK++E
Sbjct: 336 GWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIE 375
Score = 118 (46.6 bits), Expect = 5.8e-40, Sum P(2) = 5.8e-40
Identities = 33/113 (29%), Positives = 50/113 (44%)
Query: 22 VYMWGYLP-GT--SPEKSPILSPIPARLCGGDSWKDV-CGGGCGFALATSESGKLITWGS 77
VY WG+ G S + +P+P + G K + CG LA + G++ +WG
Sbjct: 89 VYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDS--HCLAVTMEGEVQSWGR 146
Query: 78 ADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+ GQ L + P+ + AAG H +VTE G++Y WGW
Sbjct: 147 -NQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGW 198
Score = 110 (43.8 bits), Expect = 4.0e-39, Sum P(2) = 4.0e-39
Identities = 44/182 (24%), Positives = 75/182 (41%)
Query: 55 VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS------VVK 108
+ G ++A + +WG +D GQ G HG+ E P PT+ S +V
Sbjct: 19 IISAGASHSVALLSGDIVCSWGRGED-GQL----G-HGDA-EDRPSPTQLSALDGHQIVS 71
Query: 109 AAAGWAHCVSVTEAG-EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP 167
G H V+ +++G EVY+WGW + ++ S+ F + +Q
Sbjct: 72 VTCGADHTVAYSQSGMEVYSWGWGDF---GRLGHG-NSSDLFTPLPIKALHGIRIKQIAC 127
Query: 168 SDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL 227
D ++ S R ++ GD +L P + G++I VAAG HT +
Sbjct: 128 GDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAV 187
Query: 228 SD 229
++
Sbjct: 188 TE 189
Score = 106 (42.4 bits), Expect = 6.5e-38, Sum P(2) = 6.5e-38
Identities = 58/206 (28%), Positives = 87/206 (42%)
Query: 41 PIPARLCGGDSWKDVCGGGCG--FALATSESG-KLITWGSADDEGQSYLTSGKHGETPEP 97
P P +L D + + CG +A S+SG ++ +WG D + G HG + +
Sbjct: 56 PSPTQLSALDGHQ-IVSVTCGADHTVAYSQSGMEVYSWGWGD-----FGRLG-HGNSSDL 108
Query: 98 F-PLPTEA----SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
F PLP +A + + A G +HC++VT GEV +WG + G + +D
Sbjct: 109 FTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQ-------NGQLGLGDT--ED 159
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE----------NPASGDEFFTLS 202
S Q E AG E T++ E+ + N GD L
Sbjct: 160 SLVPQKIQAFEGIRIKMVAAGAE-----HTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLV 214
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILS 228
P VT G K++ VA G RHT+ +S
Sbjct: 215 PERVTSTGGEKMSMVACGWRHTISVS 240
Score = 90 (36.7 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 25/95 (26%), Positives = 45/95 (47%)
Query: 42 IPARLC--GGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
+P R+ GG+ V CG+ ++ S SG L T+G + GQ + P
Sbjct: 214 VPERVTSTGGEKMSMVA---CGWRHTISVSYSGALYTYGWSK-YGQLGHGDLEDHLIPHK 269
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ + + + + GW H +++T G++Y WGW +
Sbjct: 270 LEALSNSFISQISGGWRHTMALTSDGKLYGWGWNK 304
Score = 86 (35.3 bits), Expect = 4.9e-14, Sum P(2) = 4.9e-14
Identities = 22/72 (30%), Positives = 29/72 (40%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G A +E G L WG G L PE + A GW H +S
Sbjct: 180 GAEHTAAVTEDGDLYGWGWGR-YGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTIS 238
Query: 119 VTEAGEVYTWGW 130
V+ +G +YT+GW
Sbjct: 239 VSYSGALYTYGW 250
Score = 78 (32.5 bits), Expect = 1.0e-07, Sum P(3) = 1.0e-07
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSL 338
V +++CG RH+ VT+ + +G G GQ G G + D+ P +L
Sbjct: 330 VVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEAL 377
Score = 50 (22.7 bits), Expect = 8.2e-05, Sum P(2) = 8.2e-05
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
G+ SP V K+ +V+ G RHTL +++
Sbjct: 311 GNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTE 345
Score = 38 (18.4 bits), Expect = 1.5e-33, Sum P(2) = 1.5e-33
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWG 129
V+ +AG +H V++ V +WG
Sbjct: 17 VLIISAGASHSVALLSGDIVCSWG 40
Score = 38 (18.4 bits), Expect = 1.0e-07, Sum P(3) = 1.0e-07
Identities = 6/15 (40%), Positives = 12/15 (80%)
Query: 214 ITKVAAGGRHTLILS 228
I++++ G RHT+ L+
Sbjct: 278 ISQISGGWRHTMALT 292
>ZFIN|ZDB-GENE-070718-6 [details] [associations]
symbol:herc2 "hect domain and RLD 2" species:7955
"Danio rerio" [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0006464 "cellular protein modification
process" evidence=IEA] [GO:0020037 "heme binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00632
InterPro:IPR000433 InterPro:IPR000569 InterPro:IPR001199
InterPro:IPR009060 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-070718-6
GO:GO:0046872 GO:GO:0008270 GO:GO:0020037 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
SUPFAM:SSF46934 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 InterPro:IPR006624 SMART:SM00706
EMBL:CABZ01006344 EMBL:CABZ01006345 EMBL:CABZ01006346 EMBL:FP085470
IPI:IPI00495163 Ensembl:ENSDART00000110770 Uniprot:E7EYK8
Length = 4832
Score = 288 (106.4 bits), Expect = 2.3e-28, Sum P(3) = 2.3e-28
Identities = 64/180 (35%), Positives = 98/180 (54%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
+++IACG HSA +T +G L ++G G YG+ GHG QLRP L+ +V Q+A G
Sbjct: 3097 IRDIACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVVQVACGS 3156
Query: 351 W--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
T+ ++ EG V+ +G FG+LG G + N+P+ +E L + + CGA+ S
Sbjct: 3157 RDAQTLALTDEGMVFSWGDGDFGKLGRGGSEGCNIPQNIER--LNGQGVCQIECGAQFSL 3214
Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
LT+ G V +WG Y +LG G + P +V + G ++A G H L + ET Q+
Sbjct: 3215 ALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTETGQV 3274
Score = 268 (99.4 bits), Expect = 6.9e-19, Sum P(2) = 6.9e-19
Identities = 68/192 (35%), Positives = 99/192 (51%)
Query: 279 SVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSL 338
SV S G+ V IACG +SA +T G L T+G G YG+ GHGS+ DQ P ++L
Sbjct: 532 SVFSGRPVGKQVV-HIACGSTYSAAITADGELHTWGRGNYGRLGHGSSEDQTTPMLVTAL 590
Query: 339 MDIQVEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKR 396
++V +A G T+ ++ G+V+ +G +G+LG G PKL+E L+
Sbjct: 591 KGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEK--LQDLD 648
Query: 397 AKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGW 455
V CG++ S LT+DGQV +WG +LG G P L+ + G +IA G
Sbjct: 649 IVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQGKRVVDIAVGS 708
Query: 456 WHTLLLAETTQI 467
H L L E ++
Sbjct: 709 THCLALTEEGEV 720
Score = 241 (89.9 bits), Expect = 2.6e-23, Sum P(3) = 2.6e-23
Identities = 57/180 (31%), Positives = 96/180 (53%)
Query: 290 YVKEIAC--GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA 347
+++++A GG+H ++ G L ++G G+ GHG+ + RP SL ++V IA
Sbjct: 4036 FIRKVAVNSGGKHCLALSSEGELYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIA 4095
Query: 348 AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA--R 405
AG H+ CI+ G +Y +G ++G+LG G + + PKL+E L+ R V+CG+
Sbjct: 4096 AGGAHSACITASGELYTWGKGRYGRLGHGDSEDQLKPKLVEA--LQGHRVIDVACGSGDA 4153
Query: 406 HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAET 464
+ LT+D V SWG YG+LG G S +P + + G + CG ++ L ++
Sbjct: 4154 QTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4213
Score = 229 (85.7 bits), Expect = 5.6e-21, Sum P(3) = 5.6e-21
Identities = 59/179 (32%), Positives = 97/179 (54%)
Query: 291 VKEIAC--GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
VK++A GGRH+ +T G + ++G G G+ GH S + +P +L ++ IA
Sbjct: 3043 VKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIAC 3102
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGAR--H 406
G H+ I+ G +Y +G ++G+LG G + + PKL++ +L R V+CG+R
Sbjct: 3103 GSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVK--VLLGHRVVQVACGSRDAQ 3160
Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAET 464
+ LT++G V SWG +G+LG G S NIP + ++G I CG +L L ++
Sbjct: 3161 TLALTDEGMVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 3219
Score = 212 (79.7 bits), Expect = 6.1e-20, Sum P(3) = 6.1e-20
Identities = 52/162 (32%), Positives = 85/162 (52%)
Query: 297 GGRHSA-VVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHT 353
GG + VT G L G+G G+ G G T P+ S+ + + ++A +G H
Sbjct: 3990 GGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHC 4049
Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
+ +S EG +Y +G + G+LG G + P+++E+ L ++ G HSA +T
Sbjct: 4050 LALSSEGELYSWGEAEDGKLGHGNRSPCDRPRVIES--LRGVEVVDIAAGGAHSACITAS 4107
Query: 414 GQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACG 454
G++ +WG +YG+LG GDS D+ P LV + G ++ACG
Sbjct: 4108 GELYTWGKGRYGRLGHGDSEDQLKPKLVEALQGHRVIDVACG 4149
Score = 211 (79.3 bits), Expect = 7.9e-20, Sum P(3) = 7.9e-20
Identities = 54/172 (31%), Positives = 86/172 (50%)
Query: 291 VKEIACGG--RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
V ++ACG + +TD + ++G G YG+ G G ++ P SL + V ++
Sbjct: 4143 VIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 4202
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
G +V ++ G VY +G + +LG G D P+ ++ L+ K+ ++ G+ H
Sbjct: 4203 GSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG--LQGKKVIAIATGSLHCV 4260
Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTL 459
TEDG+V +WG N GQLG G + P LV + G +ACG HTL
Sbjct: 4261 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTL 4312
Score = 208 (78.3 bits), Expect = 1.5e-18, Sum P(3) = 1.5e-18
Identities = 54/172 (31%), Positives = 86/172 (50%)
Query: 291 VKEIACGGR--HSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
V ++ACG R + +TD G + ++G G +G+ G G + P L V QI
Sbjct: 3149 VVQVACGSRDAQTLALTDEGMVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIEC 3208
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
G ++ ++ G V+ +G + +LG G D P+++E L K+ V+ GA H
Sbjct: 3209 GAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEG--LRGKKIVHVAVGALHCL 3266
Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTL 459
+TE GQV +WG N +GQ G G + P+LV + G +ACG H++
Sbjct: 3267 AVTETGQVFAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3318
Score = 207 (77.9 bits), Expect = 2.7e-14, Sum P(4) = 2.7e-14
Identities = 44/134 (32%), Positives = 74/134 (55%)
Query: 291 VKEIACGG--RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
V ++ACG + VT+ G + ++G G YG+ G G ++ P L D+ + ++
Sbjct: 595 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCC 654
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
G +V ++ +G+VY +G +LG G D+ PKLL++ L+ KR ++ G+ H
Sbjct: 655 GSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRYPKLLDS--LQGKRVVDIAVGSTHCL 712
Query: 409 VLTEDGQVLSWGWN 422
LTE+G+V SWG N
Sbjct: 713 ALTEEGEVHSWGSN 726
Score = 189 (71.6 bits), Expect = 6.6e-10, Sum P(2) = 6.6e-10
Identities = 52/177 (29%), Positives = 86/177 (48%)
Query: 298 GRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSL----MDIQVEQIAAGLWHT 353
G+H ++ G + ++G G G+ GHG T P+ S + QV IA G ++
Sbjct: 494 GQHYLALSVNGEVFSWGCGDGGRLGHGDTTYLEEPTMISVFSGRPVGKQVVHIACGSTYS 553
Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL--T 411
I+ +G ++ +G +G+LG G + + P L+ L+ + V+CG+ + L T
Sbjct: 554 AAITADGELHTWGRGNYGRLGHGSSEDQTTPMLVTA--LKGLKVIDVACGSGDAQTLAVT 611
Query: 412 EDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
E+GQV SWG YG+LG G S P LV + + CG ++ L + Q+
Sbjct: 612 ENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQV 668
Score = 174 (66.3 bits), Expect = 9.0e-15, Sum P(4) = 9.0e-15
Identities = 37/121 (30%), Positives = 61/121 (50%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
V +I CG + S +T +G + T+G G Y + GHG+ +P L ++ +A G
Sbjct: 3203 VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGA 3262
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
H + ++ G+V+ +G N GQ G G P L++ LE ++ V+CG+ HS
Sbjct: 3263 LHCLAVTETGQVFAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSVAW 3320
Query: 411 T 411
T
Sbjct: 3321 T 3321
Score = 172 (65.6 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 54/175 (30%), Positives = 87/175 (49%)
Query: 303 VVTDAGAL-LTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL--WHTVCISVE 359
V ++ G L LT +Y Q + ST L P +L ++ ++AA H + +SV
Sbjct: 447 VCSEKGFLILTITGAVYTQ-NYKSTT--LAPMLVHALTSRKIMKLAAHPDGQHYLALSVN 503
Query: 360 GRVYVFGGNQFGQLGTGVDQAENVPKLLET----PILESKRAKVVSCGARHSAVLTEDGQ 415
G V+ +G G+LG G P ++ P+ K+ ++CG+ +SA +T DG+
Sbjct: 504 GEVFSWGCGDGGRLGHGDTTYLEEPTMISVFSGRPV--GKQVVHIACGSTYSAAITADGE 561
Query: 416 VLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWW--HTLLLAETTQI 467
+ +WG YG+LG G S D+ P LV + G ++ACG TL + E Q+
Sbjct: 562 LHTWGRGNYGRLGHGSSEDQTTPMLVTALKGLKVIDVACGSGDAQTLAVTENGQV 616
Score = 169 (64.5 bits), Expect = 2.9e-15, Sum P(2) = 2.9e-15
Identities = 49/161 (30%), Positives = 80/161 (49%)
Query: 313 FGWGLYG--QCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQ 369
F WGL Q G G +++ PS++ +L + V Q+A G ++ EG+VY G
Sbjct: 2958 FVWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTAEGKVYACGEAT 3016
Query: 370 FGQLGTGVDQAENVPKLLETPILESKRAKVVSC--GARHSAVLTEDGQVLSWGWNKYGQL 427
G+LG G+ +P + L + K V+ G RH+ LT DG+V SWG G+L
Sbjct: 3017 NGRLGLGLSSG-TIPIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKL 3075
Query: 428 GLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
G ++ + P L+ + R+IACG H+ + + ++
Sbjct: 3076 GHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGEL 3116
Score = 148 (57.2 bits), Expect = 8.5e-13, Sum P(3) = 8.5e-13
Identities = 42/164 (25%), Positives = 81/164 (49%)
Query: 308 GALLTFGWGLY--GQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYV 364
G+ +GWG GQ G G +++ P+ +L ++ Q+ G ++ +G++Y
Sbjct: 3948 GSGTIYGWGHNHRGQLG-GIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYA 4006
Query: 365 FGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKY 424
G G+LG G ++ + P LLE+ R V+ G +H L+ +G++ SWG +
Sbjct: 4007 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGELYSWGEAED 4066
Query: 425 GQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
G+LG G+ + P ++ + G +IA G H+ + + ++
Sbjct: 4067 GKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGEL 4110
Score = 121 (47.7 bits), Expect = 2.3e-28, Sum P(3) = 2.3e-28
Identities = 26/75 (34%), Positives = 42/75 (56%)
Query: 55 VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWA 114
VC G F++A ++ G++ TWG D++ + T +H P+ VV A G
Sbjct: 652 VCCGS-QFSVALTKDGQVYTWGKGDNQRLGHGTD-EHVRYPKLLDSLQGKRVVDIAVGST 709
Query: 115 HCVSVTEAGEVYTWG 129
HC+++TE GEV++WG
Sbjct: 710 HCLALTEEGEVHSWG 724
Score = 116 (45.9 bits), Expect = 8.4e-23, Sum P(3) = 8.4e-23
Identities = 28/77 (36%), Positives = 39/77 (50%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAG 112
VC CG F+LA ++SG + TWG D + T H P+ +V A G
Sbjct: 3203 VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTD-VHVRKPQMVEGLRGKKIVHVAVG 3261
Query: 113 WAHCVSVTEAGEVYTWG 129
HC++VTE G+V+ WG
Sbjct: 3262 ALHCLAVTETGQVFAWG 3278
Score = 111 (44.1 bits), Expect = 6.9e-19, Sum P(2) = 6.9e-19
Identities = 30/77 (38%), Positives = 39/77 (50%)
Query: 55 VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT--EASVVKAAAG 112
V GG LA S G+L +WG A+D G+ L G P + + VV AAG
Sbjct: 4042 VNSGG-KHCLALSSEGELYSWGEAED-GK--LGHGNRSPCDRPRVIESLRGVEVVDIAAG 4097
Query: 113 WAHCVSVTEAGEVYTWG 129
AH +T +GE+YTWG
Sbjct: 4098 GAHSACITASGELYTWG 4114
Score = 110 (43.8 bits), Expect = 1.1e-13, Sum P(4) = 1.1e-13
Identities = 28/78 (35%), Positives = 42/78 (53%)
Query: 54 DV-CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAA 111
DV CG G LA +E+G++ +WG D G+ G G +TP+ + +VK
Sbjct: 597 DVACGSGDAQTLAVTENGQVWSWGDGD-YGKLG-RGGSDGCKTPKLVEKLQDLDIVKVCC 654
Query: 112 GWAHCVSVTEAGEVYTWG 129
G V++T+ G+VYTWG
Sbjct: 655 GSQFSVALTKDGQVYTWG 672
Score = 99 (39.9 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 36/122 (29%), Positives = 61/122 (50%)
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGARHSAV 409
W T+ G +Y +G N GQLG G++ A+ VP T L + R + G +
Sbjct: 3942 W-TLSAGGSGTIYGWGHNHRGQLG-GIEGAKVKVPT--PTEALATLRPVQLIGGEQTLFA 3997
Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI--HGFLPRNIAC--GWWHTLLLAETT 465
+T DG++ + G+ G+LG+G + + P+L+ H F+ R +A G H L L+
Sbjct: 3998 VTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFI-RKVAVNSGGKHCLALSSEG 4056
Query: 466 QI 467
++
Sbjct: 4057 EL 4058
Score = 98 (39.6 bits), Expect = 4.1e-13, Sum P(3) = 4.1e-13
Identities = 26/95 (27%), Positives = 44/95 (46%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ ++ K G A+A + GK+ +WG DD G+ S + + P
Sbjct: 3030 PIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3088
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ A G +H ++T +GE+Y+WG E
Sbjct: 3089 IEALKTKRIRDIACGSSHSAAITSSGELYSWGLGE 3123
Score = 97 (39.2 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 24/74 (32%), Positives = 37/74 (50%)
Query: 284 GKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQV 343
G G+ + IA G H T+ G + T+G GQ G G+TN RP ++L ++
Sbjct: 4243 GLQGKKVIA-IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKI 4301
Query: 344 EQIAAGLWHTVCIS 357
++A G HT+ S
Sbjct: 4302 NRVACGSAHTLAWS 4315
Score = 89 (36.4 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 26/78 (33%), Positives = 36/78 (46%)
Query: 54 DV-CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAA 111
DV CG G L ++ + +WG D G+ G G + P T VVK
Sbjct: 4145 DVACGSGDAQTLCLTDDDMVWSWGDGD-YGKLG-RGGSDGCKVPMKIDSLTGLGVVKVEC 4202
Query: 112 GWAHCVSVTEAGEVYTWG 129
G V++T++G VYTWG
Sbjct: 4203 GSQFSVALTKSGAVYTWG 4220
Score = 78 (32.5 bits), Expect = 4.1e-18, Sum P(4) = 4.1e-18
Identities = 29/106 (27%), Positives = 46/106 (43%)
Query: 26 GYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSY 85
G+ T E+ ++S R G CG ++ A + G+L TWG + G+
Sbjct: 518 GHGDTTYLEEPTMISVFSGRPVGKQVVHIACGST--YSAAITADGELHTWGRGN-YGRLG 574
Query: 86 LTSGKHGETPEPFPLPTEASVVKAAAGW--AHCVSVTEAGEVYTWG 129
S + TP V+ A G A ++VTE G+V++WG
Sbjct: 575 HGSSEDQTTPMLVTALKGLKVIDVACGSGDAQTLAVTENGQVWSWG 620
Score = 77 (32.2 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 24/75 (32%), Positives = 41/75 (54%)
Query: 357 SVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGARHSAVLTEDGQ 415
++ +V+V+G N QLG G+ ++ VP ET L + V+ G++ +T +G+
Sbjct: 2952 TIRTKVFVWGLNDKDQLG-GLKGSKIKVPSFSET--LSALNVVQVAGGSKSLFAVTAEGK 3008
Query: 416 VLSWGWNKYGQLGLG 430
V + G G+LGLG
Sbjct: 3009 VYACGEATNGRLGLG 3023
Score = 76 (31.8 bits), Expect = 2.7e-14, Sum P(4) = 2.7e-14
Identities = 21/70 (30%), Positives = 33/70 (47%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL----PTEASVVKAAAGWAHCVSV 119
LA S +G++ +WG D G+ + E P + P VV A G + ++
Sbjct: 498 LALSVNGEVFSWGCGDG-GRLGHGDTTYLEEPTMISVFSGRPVGKQVVHIACGSTYSAAI 556
Query: 120 TEAGEVYTWG 129
T GE++TWG
Sbjct: 557 TADGELHTWG 566
Score = 71 (30.1 bits), Expect = 3.5e-18, Sum P(3) = 3.5e-18
Identities = 20/75 (26%), Positives = 33/75 (44%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAAGWA 114
CG LA ++ G + +WG D G+ G G P+ V + G
Sbjct: 3154 CGSRDAQTLALTDEGMVFSWGDGDF-GKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQ 3211
Query: 115 HCVSVTEAGEVYTWG 129
+++T++G V+TWG
Sbjct: 3212 FSLALTKSGVVWTWG 3226
Score = 67 (28.6 bits), Expect = 4.2e-14, Sum P(3) = 4.2e-14
Identities = 21/77 (27%), Positives = 33/77 (42%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA--AGWAH 115
GG A + GKL G G+ + + TP + K A +G H
Sbjct: 3990 GGEQTLFAVTADGKLYATGYGAG-GRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKH 4048
Query: 116 CVSVTEAGEVYTWGWRE 132
C++++ GE+Y+WG E
Sbjct: 4049 CLALSSEGELYSWGEAE 4065
Score = 57 (25.1 bits), Expect = 3.9e-16, Sum P(3) = 3.9e-16
Identities = 34/131 (25%), Positives = 53/131 (40%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G LA +E+G++ WG +D GQ + P + + A G +H V+
Sbjct: 3261 GALHCLAVTETGQVFAWGD-NDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3319
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQS-ALPTEQAPP--SDKRAGEE 175
T +V T PS F +A +DS G +P++ P S+K G
Sbjct: 3320 WTTV-DVTT-------PSVHEPVLFQTA----RDSLGASYLGVPSDSDPSLLSNKLNGVN 3367
Query: 176 VVKRRKTSSAR 186
VK + S A+
Sbjct: 3368 NVKPNRPSLAK 3378
Score = 57 (25.1 bits), Expect = 2.0e-08, Sum P(4) = 2.0e-08
Identities = 19/69 (27%), Positives = 29/69 (42%)
Query: 61 GFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVT 120
G A + K+ WG +D+ Q G + P + +VV+ A G +VT
Sbjct: 2946 GLESAATIRTKVFVWG-LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT 3004
Query: 121 EAGEVYTWG 129
G+VY G
Sbjct: 3005 AEGKVYACG 3013
Score = 56 (24.8 bits), Expect = 2.5e-08, Sum P(4) = 2.5e-08
Identities = 17/64 (26%), Positives = 30/64 (46%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAG------ 112
G LA +E G++ +WGS +D+ Q + T + + P+ P +V + G
Sbjct: 707 GSTHCLALTEEGEVHSWGS-NDKLQHFDTLFSNKKQPKALPGLNSKHIVGISCGPGQSFS 765
Query: 113 WAHC 116
W+ C
Sbjct: 766 WSSC 769
Score = 48 (22.0 bits), Expect = 2.6e-23, Sum P(3) = 2.6e-23
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTL 225
P LV G KIT+VA G H++
Sbjct: 3296 PTLVQGLEGQKITRVACGSSHSV 3318
Score = 48 (22.0 bits), Expect = 6.9e-19, Sum P(2) = 6.9e-19
Identities = 15/31 (48%), Positives = 18/31 (58%)
Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILS 228
TL+P LV KI K+AA G+H L LS
Sbjct: 471 TLAPMLVHALTSRKIMKLAAHPDGQHYLALS 501
Score = 47 (21.6 bits), Expect = 2.1e-11, Sum P(4) = 2.1e-11
Identities = 10/30 (33%), Positives = 18/30 (60%)
Query: 102 TEASVVKAAA--GWAHCVSVTEAGEVYTWG 129
T ++K AA H ++++ GEV++WG
Sbjct: 481 TSRKIMKLAAHPDGQHYLALSVNGEVFSWG 510
Score = 46 (21.3 bits), Expect = 1.3e-19, Sum P(3) = 1.3e-19
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 202 SPC----LVTLNPGVKITKVAAGGRHTLILS 228
SPC ++ GV++ +AAGG H+ ++
Sbjct: 4075 SPCDRPRVIESLRGVEVVDIAAGGAHSACIT 4105
Score = 46 (21.3 bits), Expect = 9.0e-15, Sum P(4) = 9.0e-15
Identities = 7/11 (63%), Positives = 7/11 (63%)
Query: 411 TEDGQVLSWGW 421
T DG V WGW
Sbjct: 3690 TSDGSVNGWGW 3700
Score = 42 (19.8 bits), Expect = 1.1e-22, Sum P(3) = 1.1e-22
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILS 228
+P L+ V I KVA +GG+H L LS
Sbjct: 4025 TPTLLESIQHVFIRKVAVNSGGKHCLALS 4053
Score = 42 (19.8 bits), Expect = 4.1e-18, Sum P(4) = 4.1e-18
Identities = 7/12 (58%), Positives = 7/12 (58%)
Query: 120 TEAGEVYTWGWR 131
T G V WGWR
Sbjct: 3690 TSDGSVNGWGWR 3701
Score = 42 (19.8 bits), Expect = 2.7e-14, Sum P(4) = 2.7e-14
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 202 SPCLVTLNPGVKITKVAAG 220
+P LVT G+K+ VA G
Sbjct: 583 TPMLVTALKGLKVIDVACG 601
Score = 41 (19.5 bits), Expect = 1.3e-22, Sum P(3) = 1.3e-22
Identities = 11/35 (31%), Positives = 16/35 (45%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
G + P +V G KI VA G H L +++
Sbjct: 3236 GTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTE 3270
Score = 39 (18.8 bits), Expect = 2.3e-28, Sum P(3) = 2.3e-28
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 212 VKITKVAAGGRHTLILS 228
VK V +GGRH + L+
Sbjct: 3043 VKKVAVHSGGRHAMALT 3059
Score = 37 (18.1 bits), Expect = 1.8e-06, Sum P(4) = 1.8e-06
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 60 CGFALATSESGKLITWGSADDEGQSYLTSGKHGE 93
C T + ++G ++ GQS SG+ G+
Sbjct: 2728 CESCFKTRKHNPRHSFGRINEPGQSPTFSGRSGK 2761
>UNIPROTKB|F1S098 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR017986 InterPro:IPR000569 InterPro:IPR001680
InterPro:IPR003877 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016567
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 SUPFAM:SSF56204
CTD:8925 KO:K10594 OMA:HHYQDGI GeneTree:ENSGT00700000104312
EMBL:CU550694 EMBL:CU582937 RefSeq:XP_001927286.4 UniGene:Ssc.96208
UniGene:Ssc.97542 Ensembl:ENSSSCT00000005038 GeneID:100153537
KEGG:ssc:100153537 Uniprot:F1S098
Length = 4859
Score = 291 (107.5 bits), Expect = 1.5e-27, Sum P(3) = 1.5e-27
Identities = 66/179 (36%), Positives = 106/179 (59%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
V +++CG +HSAVVT G L TFG G YG+ G G+T+++ P ++L Q+ Q+A GL
Sbjct: 4134 VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGL 4193
Query: 351 WHTVCISVEGR-VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
HT+ +S +G V+ FG +G+LG G A++ P+ ++ +L K V+CG + S
Sbjct: 4194 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVD--VLCGIGIKKVACGTQFSVA 4251
Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI-HGFLPRNIACGWWHTLLLAETTQI 467
LT+DG V ++G ++ L G + + N P +P+ G + ++A G HTL LA T +
Sbjct: 4252 LTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDV 4310
Score = 254 (94.5 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 62/178 (34%), Positives = 97/178 (54%)
Query: 289 SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQI 346
S + I G + V++ G++ G G YG+ G G +N+Q L+ I+
Sbjct: 403 SDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSS 462
Query: 347 AAGL-WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGAR 405
+ G HT+ + EG V+ +G +G+LG G + PKL++ P L+ K VS G R
Sbjct: 463 SKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP-LQGKVVVCVSAGYR 521
Query: 406 HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAE 463
HSA +TEDG++ +WG +G+LG GDS RNIP+LV + ++CG HT+ L++
Sbjct: 522 HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGE-VSCGSSHTIALSK 578
Score = 249 (92.7 bits), Expect = 4.2e-22, Sum P(3) = 4.2e-22
Identities = 52/172 (30%), Positives = 99/172 (57%)
Query: 295 ACGGR-HSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
+CG HS +T++G + ++G G YG+ GHG+++ Q RP +L +V Q++ G H+
Sbjct: 4085 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4144
Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
++ +G+++ FG +G+LG G + +P+ + LE + V+CG H+ ++ D
Sbjct: 4145 AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA--LEGYQIGQVACGLNHTLAVSAD 4202
Query: 414 GQVL-SWGWNKYGQLGLGDSIDRNIPSLVPIH-GFLPRNIACGWWHTLLLAE 463
G ++ ++G YG+LGLG+S ++ P V + G + +ACG ++ L +
Sbjct: 4203 GSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTK 4254
Score = 249 (92.7 bits), Expect = 4.2e-22, Sum P(3) = 4.2e-22
Identities = 54/178 (30%), Positives = 98/178 (55%)
Query: 289 SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
S +++ CG + V+ G +L G G YG+ G G+++D + S+L V Q+
Sbjct: 4025 SQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVT 4084
Query: 349 GLW---HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGAR 405
H++ ++ G V+ +G +G+LG G + P+ +E L+ + +SCG +
Sbjct: 4085 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA--LQGEEVVQMSCGFK 4142
Query: 406 HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLA 462
HSAV+T DG++ ++G YG+LGLG++ ++ +P V + G+ +ACG HTL ++
Sbjct: 4143 HSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVS 4200
Score = 208 (78.3 bits), Expect = 5.1e-18, Sum P(2) = 5.1e-18
Identities = 56/175 (32%), Positives = 88/175 (50%)
Query: 289 SYVKEIACGGRHS-AVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA 347
S V E++CG H+ A+ D + +FG G G+ GHG TN +P +L + + ++
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVC 620
Query: 348 AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV-PKLLETPILESKRAKVVSCGARH 406
AG ++ ++ G+VY +G LG G +A + PKL+E L + R +S G H
Sbjct: 621 AGSQSSLALTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEE--LAATRIVDISIGDSH 676
Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDR-NIPSLVP-IHGFLPRNIACGWWHTL 459
L+ D +V +WG N GQ G G+S P V + G + I+ G H+L
Sbjct: 677 CLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731
Score = 172 (65.6 bits), Expect = 2.7e-13, Sum P(3) = 2.7e-13
Identities = 49/157 (31%), Positives = 73/157 (46%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
+K++ACG + S +T G + TFG G + RP L + +E +A G
Sbjct: 4239 IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGA 4298
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
HT+ ++ G VY +G N GQLG G P L+ +L+ K + +S G HSA
Sbjct: 4299 EHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVT--VLQGKNVRQISAGRCHSAAW 4356
Query: 411 TEDG-QVLSWGWNKYGQLGLGDSIDRNIPSL--VPIH 444
T + G + QLGL D++ +L V IH
Sbjct: 4357 TAPPVPPRAPGVSVPLQLGLPDAVPPQYGALREVSIH 4393
Score = 171 (65.3 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 47/168 (27%), Positives = 78/168 (46%)
Query: 303 VVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRV 362
+V++ + +G Q G+ L+P A S D Q I AG + T IS +G V
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT--IEAGQYCTFVISTDGSV 424
Query: 363 YVFGGNQFGQLGTGVDQAEN-VPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
G +G+LG G ++ + KL P K+ H+ T +G+V SWG
Sbjct: 425 RACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGD 484
Query: 422 NKYGQLGLGDSIDRNIPSLV--PIHGFLPRNIACGWWHTLLLAETTQI 467
YG+LG G+S + P L+ P+ G + ++ G+ H+ + E ++
Sbjct: 485 GDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGEL 532
Score = 112 (44.5 bits), Expect = 6.9e-06, Sum P(4) = 6.9e-06
Identities = 34/121 (28%), Positives = 62/121 (51%)
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
WH + + VY++G + GQL + NV P +A+ V CG + V+
Sbjct: 3989 WH---LGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFS--QAQQVICGQNCTFVI 4040
Query: 411 TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNI--ACGW-WHTLLLAETTQ 466
+G VL+ G YG+LG G+S D ++ +++ + GF+ + +CG H++ L E+ +
Sbjct: 4041 QANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGE 4100
Query: 467 I 467
+
Sbjct: 4101 V 4101
Score = 106 (42.4 bits), Expect = 1.5e-27, Sum P(3) = 1.5e-27
Identities = 25/73 (34%), Positives = 37/73 (50%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA-AAGWAHC 116
G G LA + G++ +WG D + S + P+ P + VV +AG+ H
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ-KYPKLIQGPLQGKVVVCVSAGYRHS 523
Query: 117 VSVTEAGEVYTWG 129
+VTE GE+YTWG
Sbjct: 524 AAVTEDGELYTWG 536
Score = 89 (36.4 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 22/74 (29%), Positives = 38/74 (51%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAH 115
CG G ++A +ESG++ +WG D + S + + L E VV+ + G+ H
Sbjct: 4086 CGSD-GHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGE-EVVQMSCGFKH 4143
Query: 116 CVSVTEAGEVYTWG 129
VT G+++T+G
Sbjct: 4144 SAVVTSDGKLFTFG 4157
Score = 77 (32.2 bits), Expect = 1.5e-24, Sum P(3) = 1.5e-24
Identities = 20/77 (25%), Positives = 35/77 (45%)
Query: 53 KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAG 112
+ VC G +LA + +G++ WG G +S P+ +V + G
Sbjct: 617 RKVCAGSQS-SLALTSTGQVYAWGCGACLGCG--SSEATALRPKLIEELAATRIVDISIG 673
Query: 113 WAHCVSVTEAGEVYTWG 129
+HC++++ EVY WG
Sbjct: 674 DSHCLALSHDNEVYAWG 690
Score = 74 (31.1 bits), Expect = 3.1e-24, Sum P(3) = 3.1e-24
Identities = 28/93 (30%), Positives = 43/93 (46%)
Query: 53 KDVCGGG---CGFA--LATSESGKLITWG-SADDEGQSYLTSGKHGETPEPF-PLPTEAS 105
KD+ G CG + +A S+ G+ + W D G+ G HG+T + P EA
Sbjct: 558 KDISNVGEVSCGSSHTIALSKDGRTV-WSFGGGDNGKL----G-HGDTNRVYKPKVIEAL 611
Query: 106 ----VVKAAAGWAHCVSVTEAGEVYTWGWRECV 134
+ K AG +++T G+VY WG C+
Sbjct: 612 QGMFIRKVCAGSQSSLALTSTGQVYAWGCGACL 644
Score = 68 (29.0 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 24/81 (29%), Positives = 41/81 (50%)
Query: 53 KDVCGGGCGF---ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA 109
++V CGF A+ TS+ GKL T+G+ D G+ L + + + PE + +
Sbjct: 4132 EEVVQMSCGFKHSAVVTSD-GKLFTFGNGD-YGRLGLGNTSNKKLPERVTALEGYQIGQV 4189
Query: 110 AAGWAHCVSVTEAGE-VYTWG 129
A G H ++V+ G V+ +G
Sbjct: 4190 ACGLNHTLAVSADGSMVWAFG 4210
Score = 66 (28.3 bits), Expect = 1.2e-23, Sum P(2) = 1.2e-23
Identities = 24/97 (24%), Positives = 41/97 (42%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
P +P S +CG + + G A G+L G++DD + S G
Sbjct: 4018 PAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRL-GQGNSDDLHVLTVISALQG 4076
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
F + +V + H +++TE+GEV++WG
Sbjct: 4077 -----FVV---TQLVTSCGSDGHSMALTESGEVFSWG 4105
Score = 66 (28.3 bits), Expect = 2.0e-23, Sum P(3) = 2.0e-23
Identities = 21/77 (27%), Positives = 39/77 (50%)
Query: 55 VC-GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGW 113
VC G + A +E G+L TWG D G+ L G P + ++V + + G
Sbjct: 514 VCVSAGYRHSAAVTEDGELYTWGEGDF-GR--LGHGDSNSRNIPTLVKDISNVGEVSCGS 570
Query: 114 AHCVSVTEAGE-VYTWG 129
+H +++++ G V+++G
Sbjct: 571 SHTIALSKDGRTVWSFG 587
Score = 47 (21.6 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 19/72 (26%), Positives = 30/72 (41%)
Query: 22 VYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFAL--ATS-ESGKLITWGSA 78
V +WG + G + P + G +W + G G L AT +SG + W
Sbjct: 3648 VKLWGPISGCWRCLHSLCHP---SIVNGIAWCSLPGKGSKLHLLMATGCQSGLVCVWRIP 3704
Query: 79 DDEGQSYLTSGK 90
D Q+ +TS +
Sbjct: 3705 QDTTQTSVTSSE 3716
Score = 42 (19.8 bits), Expect = 1.5e-27, Sum P(3) = 1.5e-27
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 158 SALPTEQA--PPSDK---RAGEEVVKRRKTSSAREESENPAS 194
+ LPT +A PP +EV +R+ +S +S PA+
Sbjct: 2690 TVLPTRRAQTPPISSLPTSPSDEVGRRQSLTSPDSQSARPAN 2731
Score = 41 (19.5 bits), Expect = 6.9e-06, Sum P(4) = 6.9e-06
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 324 GSTNDQLRPSYASSLMDIQVEQI 346
G+ D+L P SL+D+ Q+
Sbjct: 1827 GTYADKLSPKVVQSLLDLLCSQL 1849
Score = 40 (19.1 bits), Expect = 9.7e-21, Sum P(3) = 9.7e-21
Identities = 7/11 (63%), Positives = 8/11 (72%)
Query: 119 VTEAGEVYTWG 129
V+E EVY WG
Sbjct: 368 VSETCEVYVWG 378
Score = 37 (18.1 bits), Expect = 5.0e-27, Sum P(3) = 5.0e-27
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 174 EEVVKRRKTSSAREESENPASGDEFFTLSPCL 205
+E+ KRR+ + S + + G T S L
Sbjct: 1461 DELQKRREEGQLHQPSTSASEGGGLMTRSESL 1492
Score = 37 (18.1 bits), Expect = 5.0e-27, Sum P(3) = 5.0e-27
Identities = 10/32 (31%), Positives = 14/32 (43%)
Query: 197 EFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
E L P L+ +I ++ G H L LS
Sbjct: 650 EATALRPKLIEELAATRIVDISIGDSHCLALS 681
Score = 37 (18.1 bits), Expect = 5.0e-27, Sum P(3) = 5.0e-27
Identities = 15/51 (29%), Positives = 23/51 (45%)
Query: 174 EEVVKRRKTSSAREESEN-PASGDEFFT-LSPCLVTLNPGVKITKVAAGGR 222
E+ +K +K EE EN P F + C + N G +T +GG+
Sbjct: 2008 EQEIKLQKQGELEEEDENLPIQEVSFDPEKAQCCIVEN-GQILTH-GSGGK 2056
>UNIPROTKB|E2QYQ5 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR017986 InterPro:IPR000569
InterPro:IPR001680 InterPro:IPR003877 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00622 PROSITE:PS50082 PROSITE:PS50237
PROSITE:PS50294 SMART:SM00119 SMART:SM00320 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016567 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449
PROSITE:PS50188 SUPFAM:SSF56204 OMA:HHYQDGI
GeneTree:ENSGT00700000104312 EMBL:AAEX03016202
Ensembl:ENSCAFT00000026962 Uniprot:E2QYQ5
Length = 4863
Score = 291 (107.5 bits), Expect = 1.5e-27, Sum P(3) = 1.5e-27
Identities = 66/179 (36%), Positives = 106/179 (59%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
V +++CG +HSAVVT G L TFG G YG+ G G+T+++ P ++L Q+ Q+A GL
Sbjct: 4137 VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGL 4196
Query: 351 WHTVCISVEGR-VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
HT+ +S +G V+ FG +G+LG G A++ P+ ++ +L K V+CG + S
Sbjct: 4197 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVD--VLCGIGIKKVACGTQFSVA 4254
Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI-HGFLPRNIACGWWHTLLLAETTQI 467
LT+DG V ++G ++ L G + + N P +P+ G + ++A G HTL LA T +
Sbjct: 4255 LTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDV 4313
Score = 254 (94.5 bits), Expect = 2.2e-16, Sum P(2) = 2.2e-16
Identities = 62/178 (34%), Positives = 97/178 (54%)
Query: 289 SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQI 346
S + I G + V++ G++ G G YG+ G G +N+Q L+ I+
Sbjct: 403 SDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSS 462
Query: 347 AAGL-WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGAR 405
+ G HT+ + EG V+ +G +G+LG G + PKL++ P L+ K VS G R
Sbjct: 463 SKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP-LQGKVVVCVSAGYR 521
Query: 406 HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAE 463
HSA +TEDG++ +WG +G+LG GDS RNIP+LV + ++CG HT+ L++
Sbjct: 522 HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGE-VSCGSSHTIALSK 578
Score = 249 (92.7 bits), Expect = 4.2e-22, Sum P(3) = 4.2e-22
Identities = 52/172 (30%), Positives = 99/172 (57%)
Query: 295 ACGGR-HSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
+CG HS +T++G + ++G G YG+ GHG+++ Q RP +L +V Q++ G H+
Sbjct: 4088 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4147
Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
++ +G+++ FG +G+LG G + +P+ + LE + V+CG H+ ++ D
Sbjct: 4148 AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA--LEGYQIGQVACGLNHTLAVSAD 4205
Query: 414 GQVL-SWGWNKYGQLGLGDSIDRNIPSLVPIH-GFLPRNIACGWWHTLLLAE 463
G ++ ++G YG+LGLG+S ++ P V + G + +ACG ++ L +
Sbjct: 4206 GSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTK 4257
Score = 249 (92.7 bits), Expect = 4.2e-22, Sum P(3) = 4.2e-22
Identities = 54/178 (30%), Positives = 98/178 (55%)
Query: 289 SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
S +++ CG + V+ G +L G G YG+ G G+++D + S+L V Q+
Sbjct: 4028 SQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVT 4087
Query: 349 GLW---HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGAR 405
H++ ++ G V+ +G +G+LG G + P+ +E L+ + +SCG +
Sbjct: 4088 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA--LQGEEVVQMSCGFK 4145
Query: 406 HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLA 462
HSAV+T DG++ ++G YG+LGLG++ ++ +P V + G+ +ACG HTL ++
Sbjct: 4146 HSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVS 4203
Score = 193 (73.0 bits), Expect = 2.4e-16, Sum P(2) = 2.4e-16
Identities = 55/176 (31%), Positives = 87/176 (49%)
Query: 289 SYVKEIACGGRHS-AVVTDAGALLTFGWG-LYGQCGHGSTNDQLRPSYASSLMDIQVEQI 346
S V E++CG H+ A+ D + +FG G G+ GHG TN +P +L + + ++
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNVGKLGHGDTNRVYKPKVVEALQGMFIRKV 620
Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV-PKLLETPILESKRAKVVSCGAR 405
AG ++ ++ G+VY +G LG G +A + PKL+E L + R +S G
Sbjct: 621 CAGSQSSLALTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEE--LAATRIVDISIGDS 676
Query: 406 HSAVLTEDGQVLSWGWNKYGQLGLGDSIDR-NIPSLVP-IHGFLPRNIACGWWHTL 459
H + D +V +WG N GQ G G+S P V + G + I+ G H+L
Sbjct: 677 HVWLFVMDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSL 732
Score = 171 (65.3 bits), Expect = 3.6e-13, Sum P(3) = 3.6e-13
Identities = 49/157 (31%), Positives = 73/157 (46%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
+K++ACG + S +T G + TFG G + RP L + +E +A G
Sbjct: 4242 IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGA 4301
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
HT+ ++ G VY +G N GQLG G P L+ +L+ K + +S G HSA
Sbjct: 4302 EHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVT--VLQGKNIRQISAGRCHSAAW 4359
Query: 411 TEDG-QVLSWGWNKYGQLGLGDSIDRNIPSL--VPIH 444
T + G + QLGL D++ +L V IH
Sbjct: 4360 TAPPVPPRAPGVSVPLQLGLPDAVPPQYGALREVSIH 4396
Score = 112 (44.5 bits), Expect = 6.9e-06, Sum P(4) = 6.9e-06
Identities = 34/121 (28%), Positives = 62/121 (51%)
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
WH + + VY++G + GQL + NV P +A+ V CG + V+
Sbjct: 3992 WH---LGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFS--QAQQVICGQNCTFVI 4043
Query: 411 TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNI--ACGW-WHTLLLAETTQ 466
+G VL+ G YG+LG G+S D ++ +++ + GF+ + +CG H++ L E+ +
Sbjct: 4044 QANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGE 4103
Query: 467 I 467
+
Sbjct: 4104 V 4104
Score = 106 (42.4 bits), Expect = 1.5e-27, Sum P(3) = 1.5e-27
Identities = 25/73 (34%), Positives = 37/73 (50%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA-AAGWAHC 116
G G LA + G++ +WG D + S + P+ P + VV +AG+ H
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ-KYPKLIQGPLQGKVVVCVSAGYRHS 523
Query: 117 VSVTEAGEVYTWG 129
+VTE GE+YTWG
Sbjct: 524 AAVTEDGELYTWG 536
Score = 89 (36.4 bits), Expect = 3.7e-12, Sum P(2) = 3.7e-12
Identities = 22/74 (29%), Positives = 38/74 (51%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAH 115
CG G ++A +ESG++ +WG D + S + + L E VV+ + G+ H
Sbjct: 4089 CGSD-GHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGE-EVVQMSCGFKH 4146
Query: 116 CVSVTEAGEVYTWG 129
VT G+++T+G
Sbjct: 4147 SAVVTSDGKLFTFG 4160
Score = 81 (33.6 bits), Expect = 5.8e-25, Sum P(3) = 5.8e-25
Identities = 28/93 (30%), Positives = 46/93 (49%)
Query: 53 KDVCGGG---CGFA--LATSESGKLI-TWGSADDEGQSYLTSGKHGETPEPF-PLPTEAS 105
KD+ G CG + +A S+ G+ + ++G D+ G+ G HG+T + P EA
Sbjct: 558 KDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNVGKL----G-HGDTNRVYKPKVVEAL 612
Query: 106 ----VVKAAAGWAHCVSVTEAGEVYTWGWRECV 134
+ K AG +++T G+VY WG C+
Sbjct: 613 QGMFIRKVCAGSQSSLALTSTGQVYAWGCGACL 645
Score = 68 (29.0 bits), Expect = 5.4e-10, Sum P(2) = 5.4e-10
Identities = 24/81 (29%), Positives = 41/81 (50%)
Query: 53 KDVCGGGCGF---ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA 109
++V CGF A+ TS+ GKL T+G+ D G+ L + + + PE + +
Sbjct: 4135 EEVVQMSCGFKHSAVVTSD-GKLFTFGNGD-YGRLGLGNTSNKKLPERVTALEGYQIGQV 4192
Query: 110 AAGWAHCVSVTEAGE-VYTWG 129
A G H ++V+ G V+ +G
Sbjct: 4193 ACGLNHTLAVSADGSMVWAFG 4213
Score = 66 (28.3 bits), Expect = 1.2e-23, Sum P(2) = 1.2e-23
Identities = 24/97 (24%), Positives = 41/97 (42%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
P +P S +CG + + G A G+L G++DD + S G
Sbjct: 4021 PAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRL-GQGNSDDLHVLTVISALQG 4079
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
F + +V + H +++TE+GEV++WG
Sbjct: 4080 -----FVV---TQLVTSCGSDGHSMALTESGEVFSWG 4108
Score = 66 (28.3 bits), Expect = 2.1e-23, Sum P(3) = 2.1e-23
Identities = 21/77 (27%), Positives = 39/77 (50%)
Query: 55 VC-GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGW 113
VC G + A +E G+L TWG D G+ L G P + ++V + + G
Sbjct: 514 VCVSAGYRHSAAVTEDGELYTWGEGDF-GR--LGHGDSNSRNIPTLVKDISNVGEVSCGS 570
Query: 114 AHCVSVTEAGE-VYTWG 129
+H +++++ G V+++G
Sbjct: 571 SHTIALSKDGRTVWSFG 587
Score = 55 (24.4 bits), Expect = 2.8e-22, Sum P(3) = 2.8e-22
Identities = 19/77 (24%), Positives = 30/77 (38%)
Query: 53 KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAG 112
+ VC G +LA + +G++ WG G +S P+ +V + G
Sbjct: 618 RKVCAGSQS-SLALTSTGQVYAWGCGACLGCG--SSEATALRPKLIEELAATRIVDISIG 674
Query: 113 WAHCVSVTEAGEVYTWG 129
+H EVY WG
Sbjct: 675 DSHVWLFVMDNEVYAWG 691
Score = 42 (19.8 bits), Expect = 1.5e-27, Sum P(3) = 1.5e-27
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 158 SALPTEQA--PPSDK---RAGEEVVKRRKTSSAREESENPAS 194
+ LPT +A PP +EV +R+ +S +S PA+
Sbjct: 2693 TVLPTRRAQTPPISSLPTSPSDEVGRRQSLTSPDSQSARPAN 2734
Score = 41 (19.5 bits), Expect = 6.9e-06, Sum P(4) = 6.9e-06
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 324 GSTNDQLRPSYASSLMDIQVEQI 346
G+ D+L P SL+D+ Q+
Sbjct: 1828 GTYADKLSPKVVQSLLDLLCSQL 1850
Score = 40 (19.1 bits), Expect = 9.7e-21, Sum P(3) = 9.7e-21
Identities = 7/11 (63%), Positives = 8/11 (72%)
Query: 119 VTEAGEVYTWG 129
V+E EVY WG
Sbjct: 368 VSETCEVYVWG 378
Score = 37 (18.1 bits), Expect = 5.0e-27, Sum P(3) = 5.0e-27
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 174 EEVVKRRKTSSAREESEN 191
E+ +K +K EE EN
Sbjct: 2011 EQEIKSQKQGELEEEDEN 2028
Score = 37 (18.1 bits), Expect = 5.0e-27, Sum P(3) = 5.0e-27
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 175 EVVKRRKTSSAREESENPASGD 196
E+++ R +S R SEN S D
Sbjct: 1315 ELIQTRSSSRDRWISENQDSAD 1336
>MGI|MGI:2444156 [details] [associations]
symbol:Rccd1 "RCC1 domain containing 1" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] MGI:MGI:2444156
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005886 GO:GO:0005737
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 CTD:91433 HOGENOM:HOG000154085 HOVERGEN:HBG061852
OMA:ERPGAWF OrthoDB:EOG41NTMF EMBL:AK030872 EMBL:AK084219
EMBL:AK088662 EMBL:BC069844 IPI:IPI00881984 IPI:IPI00896067
RefSeq:NP_775621.2 UniGene:Mm.474502 ProteinModelPortal:Q8BTU7
SMR:Q8BTU7 PhosphoSite:Q8BTU7 PRIDE:Q8BTU7
Ensembl:ENSMUST00000047362 Ensembl:ENSMUST00000121882 GeneID:269955
KEGG:mmu:269955 UCSC:uc009ial.2 GeneTree:ENSGT00700000104312
InParanoid:Q8BTU7 NextBio:393123 Bgee:Q8BTU7 Genevestigator:Q8BTU7
Uniprot:Q8BTU7
Length = 377
Score = 177 (67.4 bits), Expect = 1.6e-27, Sum P(3) = 1.6e-27
Identities = 30/83 (36%), Positives = 53/83 (63%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
V+++ G H ++ AG + ++G G +GQ GHG+ +L P +L +++ ++AAG
Sbjct: 163 VRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGTLEAELEPRLLEALQGLRMAKVAAGG 222
Query: 351 WHTVCISVEGRVYVFGGNQFGQL 373
WH+VC+S G +Y++G N+ GQL
Sbjct: 223 WHSVCLSETGDIYIWGWNESGQL 245
Score = 174 (66.3 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 37/99 (37%), Positives = 55/99 (55%)
Query: 332 PSYASSLM-DIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETP 390
P + L +++V Q+ G H + + G+V+ +G + GQLG G +AE P+LLE
Sbjct: 151 PPFCQPLAPELRVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGTLEAELEPRLLEA- 209
Query: 391 ILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
L+ R V+ G HS L+E G + WGWN+ GQL L
Sbjct: 210 -LQGLRMAKVAAGGWHSVCLSETGDIYIWGWNESGQLAL 247
Score = 157 (60.3 bits), Expect = 1.6e-27, Sum P(3) = 1.6e-27
Identities = 34/82 (41%), Positives = 48/82 (58%)
Query: 384 PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP- 442
P LL+ P+ A + SCG+RH+AV+T G++ +WGW KYGQLG DS + P V
Sbjct: 292 PALLDLPL--GSDAVMASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSLDRPCCVEY 349
Query: 443 -IHGFLP-RNIACGWWHTLLLA 462
+ L R + CG W+T + A
Sbjct: 350 FVERQLEVRAVTCGPWNTYVYA 371
Score = 137 (53.3 bits), Expect = 4.2e-12, Sum P(2) = 4.2e-12
Identities = 27/67 (40%), Positives = 38/67 (56%)
Query: 295 ACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVE--QIAAGLWH 352
+CG RH+AVVT G L T+GWG YGQ GH + RP ++ Q+E + G W+
Sbjct: 307 SCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSLDRPCCVEYFVERQLEVRAVTCGPWN 366
Query: 353 TVCISVE 359
T ++E
Sbjct: 367 TYVYAME 373
Score = 127 (49.8 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 28/80 (35%), Positives = 44/80 (55%)
Query: 390 PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI-PSLVP-IHGFL 447
P+ R + + GA H +L GQV SWG ++GQLG G +++ + P L+ + G
Sbjct: 156 PLAPELRVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHG-TLEAELEPRLLEALQGLR 214
Query: 448 PRNIACGWWHTLLLAETTQI 467
+A G WH++ L+ET I
Sbjct: 215 MAKVAAGGWHSVCLSETGDI 234
Score = 98 (39.6 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 30/96 (31%), Positives = 43/96 (44%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASV--VKAAAGWAHC 116
G L +G++ +WG A GQ L G EP L + K AAG H
Sbjct: 169 GAEHVLLLCAAGQVFSWG-AGRHGQ--LGHGTLEAELEPRLLEALQGLRMAKVAAGGWHS 225
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
V ++E G++Y WGW E A TR G+ +++
Sbjct: 226 VCLSETGDIYIWGWNESGQLALPTRS-GTENKAERE 260
Score = 81 (33.6 bits), Expect = 1.6e-27, Sum P(3) = 1.6e-27
Identities = 39/161 (24%), Positives = 62/161 (38%)
Query: 82 GQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTR 141
GQ+ + H P PL + + +AGW++ VT G V G +A R
Sbjct: 18 GQALGSGNSHHSVYSPEPLHASDDICQVSAGWSYTALVTRGGRVELSG--SVSGAADGCR 75
Query: 142 DFGSAGSFQKDSTGKQSALPTEQA-PPSDKRAGEEVVKRRKTSSAREESEN-PASGDEFF 199
D ++ K + QA P GE + + S A+ + E+ P+
Sbjct: 76 DVWASEELLVLLRNKGGSSTEVQAWVPGSALQGEPLWVQNLVSGAKGQGEDEPSRESRMG 135
Query: 200 TLS--PCL---VT--------LNPGVKITKVAAGGRHTLIL 227
TL PC VT L P +++ ++ G H L+L
Sbjct: 136 TLPLLPCARAYVTPEPPFCQPLAPELRVRQLELGAEHVLLL 176
Score = 69 (29.3 bits), Expect = 9.6e-05, Sum P(2) = 9.6e-05
Identities = 15/57 (26%), Positives = 28/57 (49%)
Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCG 403
+ G HT ++ G +Y +G ++GQLG + + P +E + + V+CG
Sbjct: 307 SCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSLDRPCCVEYFVERQLEVRAVTCG 363
Score = 65 (27.9 bits), Expect = 1.1e-13, Sum P(3) = 1.1e-13
Identities = 16/39 (41%), Positives = 22/39 (56%)
Query: 94 TPEP-F--PLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
TPEP F PL E V + G H + + AG+V++WG
Sbjct: 148 TPEPPFCQPLAPELRVRQLELGAEHVLLLCAAGQVFSWG 186
Score = 62 (26.9 bits), Expect = 1.1e-13, Sum P(3) = 1.1e-13
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSD 229
L P L+ G+++ KVAAGG H++ LS+
Sbjct: 202 LEPRLLEALQGLRMAKVAAGGWHSVCLSE 230
Score = 55 (24.4 bits), Expect = 5.9e-10, Sum P(2) = 5.9e-10
Identities = 21/63 (33%), Positives = 34/63 (53%)
Query: 308 GALLTFGWGLYGQC-GHGSTNDQL---RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVY 363
GA FG+ +GQ G G+++ + P +AS DI Q++AG +T ++ GRV
Sbjct: 7 GAWFGFGFCGFGQALGSGNSHHSVYSPEPLHASD--DIC--QVSAGWSYTALVTRGGRVE 62
Query: 364 VFG 366
+ G
Sbjct: 63 LSG 65
Score = 51 (23.0 bits), Expect = 3.3e-10, Sum P(3) = 3.3e-10
Identities = 19/76 (25%), Positives = 30/76 (39%)
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGD--EFFTLSP--CLVTLNPGV 212
Q ALPT ++ +A E +EE +G F + P L+ L G
Sbjct: 244 QLALPTRSG--TENKAEREEATELNEDGLKEELAVADAGAPAHFIAIQPFPALLDLPLGS 301
Query: 213 KITKVAAGGRHTLILS 228
+ G RHT +++
Sbjct: 302 DAVMASCGSRHTAVVT 317
>UNIPROTKB|F1MNS0 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR017986 InterPro:IPR000569 InterPro:IPR001680
InterPro:IPR003877 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016567
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 SUPFAM:SSF56204
OMA:HHYQDGI GeneTree:ENSGT00700000104312 EMBL:DAAA02028744
EMBL:DAAA02028745 EMBL:DAAA02028746 IPI:IPI00924381
Ensembl:ENSBTAT00000061038 ArrayExpress:F1MNS0 Uniprot:F1MNS0
Length = 4857
Score = 291 (107.5 bits), Expect = 1.9e-27, Sum P(3) = 1.9e-27
Identities = 66/179 (36%), Positives = 106/179 (59%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
V +++CG +HSAVVT G L TFG G YG+ G G+T+++ P ++L Q+ Q+A GL
Sbjct: 4131 VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGL 4190
Query: 351 WHTVCISVEGR-VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
HT+ +S +G V+ FG +G+LG G A++ P+ ++ +L K V+CG + S
Sbjct: 4191 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVD--VLCGIGIKKVACGTQFSVA 4248
Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI-HGFLPRNIACGWWHTLLLAETTQI 467
LT+DG V ++G ++ L G + + N P +P+ G + ++A G HTL LA T +
Sbjct: 4249 LTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDV 4307
Score = 254 (94.5 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 62/178 (34%), Positives = 97/178 (54%)
Query: 289 SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQI 346
S + I G + V++ G++ G G YG+ G G +N+Q L+ I+
Sbjct: 403 SDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSS 462
Query: 347 AAGL-WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGAR 405
+ G HT+ + EG V+ +G +G+LG G + PKL++ P L+ K VS G R
Sbjct: 463 SKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP-LQGKVVVCVSAGYR 521
Query: 406 HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAE 463
HSA +TEDG++ +WG +G+LG GDS RNIP+LV + ++CG HT+ L++
Sbjct: 522 HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGE-VSCGSSHTIALSK 578
Score = 249 (92.7 bits), Expect = 5.3e-22, Sum P(3) = 5.3e-22
Identities = 52/172 (30%), Positives = 99/172 (57%)
Query: 295 ACGGR-HSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
+CG HS +T++G + ++G G YG+ GHG+++ Q RP +L +V Q++ G H+
Sbjct: 4082 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4141
Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
++ +G+++ FG +G+LG G + +P+ + LE + V+CG H+ ++ D
Sbjct: 4142 AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA--LEGYQIGQVACGLNHTLAVSAD 4199
Query: 414 GQVL-SWGWNKYGQLGLGDSIDRNIPSLVPIH-GFLPRNIACGWWHTLLLAE 463
G ++ ++G YG+LGLG+S ++ P V + G + +ACG ++ L +
Sbjct: 4200 GSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTK 4251
Score = 249 (92.7 bits), Expect = 5.3e-22, Sum P(3) = 5.3e-22
Identities = 54/178 (30%), Positives = 98/178 (55%)
Query: 289 SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
S +++ CG + V+ G +L G G YG+ G G+++D + S+L V Q+
Sbjct: 4022 SQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVT 4081
Query: 349 GLW---HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGAR 405
H++ ++ G V+ +G +G+LG G + P+ +E L+ + +SCG +
Sbjct: 4082 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA--LQGEEVVQMSCGFK 4139
Query: 406 HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLA 462
HSAV+T DG++ ++G YG+LGLG++ ++ +P V + G+ +ACG HTL ++
Sbjct: 4140 HSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVS 4197
Score = 208 (78.3 bits), Expect = 5.1e-18, Sum P(2) = 5.1e-18
Identities = 56/175 (32%), Positives = 88/175 (50%)
Query: 289 SYVKEIACGGRHS-AVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA 347
S V E++CG H+ A+ D + +FG G G+ GHG TN +P +L + + ++
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVC 620
Query: 348 AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV-PKLLETPILESKRAKVVSCGARH 406
AG ++ ++ G+VY +G LG G +A + PKL+E L + R +S G H
Sbjct: 621 AGSQSSLALTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEE--LAATRIVDISIGDSH 676
Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDR-NIPSLVP-IHGFLPRNIACGWWHTL 459
L+ D +V +WG N GQ G G+S P V + G + I+ G H+L
Sbjct: 677 CLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731
Score = 172 (65.6 bits), Expect = 3.4e-13, Sum P(3) = 3.4e-13
Identities = 49/157 (31%), Positives = 73/157 (46%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
+K++ACG + S +T G + TFG G + RP L + +E +A G
Sbjct: 4236 IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGA 4295
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
HT+ ++ G VY +G N GQLG G P L+ +L+ K + +S G HSA
Sbjct: 4296 EHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVT--VLQGKNVRQISAGRCHSAAW 4353
Query: 411 TEDG-QVLSWGWNKYGQLGLGDSIDRNIPSL--VPIH 444
T + G + QLGL D++ +L V IH
Sbjct: 4354 TAPPVPPRAPGVSVPLQLGLPDTVPPQYGALREVSIH 4390
Score = 171 (65.3 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 47/168 (27%), Positives = 78/168 (46%)
Query: 303 VVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRV 362
+V++ + +G Q G+ L+P A S D Q I AG + T IS +G V
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT--IEAGQYCTFVISTDGSV 424
Query: 363 YVFGGNQFGQLGTGVDQAEN-VPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
G +G+LG G ++ + KL P K+ H+ T +G+V SWG
Sbjct: 425 RACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGD 484
Query: 422 NKYGQLGLGDSIDRNIPSLV--PIHGFLPRNIACGWWHTLLLAETTQI 467
YG+LG G+S + P L+ P+ G + ++ G+ H+ + E ++
Sbjct: 485 GDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGEL 532
Score = 112 (44.5 bits), Expect = 2.8e-06, Sum P(4) = 2.8e-06
Identities = 34/121 (28%), Positives = 62/121 (51%)
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
WH + + VY++G + GQL + NV P +A+ V CG + V+
Sbjct: 3986 WH---LGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFS--QAQQVICGQNCTFVI 4037
Query: 411 TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNI--ACGW-WHTLLLAETTQ 466
+G VL+ G YG+LG G+S D ++ +++ + GF+ + +CG H++ L E+ +
Sbjct: 4038 QANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGE 4097
Query: 467 I 467
+
Sbjct: 4098 V 4098
Score = 106 (42.4 bits), Expect = 1.9e-27, Sum P(3) = 1.9e-27
Identities = 25/73 (34%), Positives = 37/73 (50%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA-AAGWAHC 116
G G LA + G++ +WG D + S + P+ P + VV +AG+ H
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ-KYPKLIQGPLQGKVVVCVSAGYRHS 523
Query: 117 VSVTEAGEVYTWG 129
+VTE GE+YTWG
Sbjct: 524 AAVTEDGELYTWG 536
Score = 89 (36.4 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 22/74 (29%), Positives = 38/74 (51%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAH 115
CG G ++A +ESG++ +WG D + S + + L E VV+ + G+ H
Sbjct: 4083 CGSD-GHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGE-EVVQMSCGFKH 4140
Query: 116 CVSVTEAGEVYTWG 129
VT G+++T+G
Sbjct: 4141 SAVVTSDGKLFTFG 4154
Score = 77 (32.2 bits), Expect = 1.9e-24, Sum P(3) = 1.9e-24
Identities = 20/77 (25%), Positives = 35/77 (45%)
Query: 53 KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAG 112
+ VC G +LA + +G++ WG G +S P+ +V + G
Sbjct: 617 RKVCAGSQS-SLALTSTGQVYAWGCGACLGCG--SSEATALRPKLIEELAATRIVDISIG 673
Query: 113 WAHCVSVTEAGEVYTWG 129
+HC++++ EVY WG
Sbjct: 674 DSHCLALSHDNEVYAWG 690
Score = 74 (31.1 bits), Expect = 3.9e-24, Sum P(3) = 3.9e-24
Identities = 28/93 (30%), Positives = 43/93 (46%)
Query: 53 KDVCGGG---CGFA--LATSESGKLITWG-SADDEGQSYLTSGKHGETPEPF-PLPTEAS 105
KD+ G CG + +A S+ G+ + W D G+ G HG+T + P EA
Sbjct: 558 KDISNVGEVSCGSSHTIALSKDGRTV-WSFGGGDNGKL----G-HGDTNRVYKPKVIEAL 611
Query: 106 ----VVKAAAGWAHCVSVTEAGEVYTWGWRECV 134
+ K AG +++T G+VY WG C+
Sbjct: 612 QGMFIRKVCAGSQSSLALTSTGQVYAWGCGACL 644
Score = 68 (29.0 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 24/81 (29%), Positives = 41/81 (50%)
Query: 53 KDVCGGGCGF---ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA 109
++V CGF A+ TS+ GKL T+G+ D G+ L + + + PE + +
Sbjct: 4129 EEVVQMSCGFKHSAVVTSD-GKLFTFGNGD-YGRLGLGNTSNKKLPERVTALEGYQIGQV 4186
Query: 110 AAGWAHCVSVTEAGE-VYTWG 129
A G H ++V+ G V+ +G
Sbjct: 4187 ACGLNHTLAVSADGSMVWAFG 4207
Score = 66 (28.3 bits), Expect = 1.2e-23, Sum P(2) = 1.2e-23
Identities = 24/97 (24%), Positives = 41/97 (42%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
P +P S +CG + + G A G+L G++DD + S G
Sbjct: 4015 PAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRL-GQGNSDDLHVLTVISALQG 4073
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
F + +V + H +++TE+GEV++WG
Sbjct: 4074 -----FVV---TQLVTSCGSDGHSMALTESGEVFSWG 4102
Score = 66 (28.3 bits), Expect = 2.6e-23, Sum P(3) = 2.6e-23
Identities = 21/77 (27%), Positives = 39/77 (50%)
Query: 55 VC-GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGW 113
VC G + A +E G+L TWG D G+ L G P + ++V + + G
Sbjct: 514 VCVSAGYRHSAAVTEDGELYTWGEGDF-GR--LGHGDSNSRNIPTLVKDISNVGEVSCGS 570
Query: 114 AHCVSVTEAGE-VYTWG 129
+H +++++ G V+++G
Sbjct: 571 SHTIALSKDGRTVWSFG 587
Score = 47 (21.6 bits), Expect = 2.3e-21, Sum P(3) = 2.3e-21
Identities = 19/72 (26%), Positives = 30/72 (41%)
Query: 22 VYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFAL--ATS-ESGKLITWGSA 78
V +WG + G + P + G +W + G G L AT +SG + W
Sbjct: 3645 VKLWGPISGCWRCLHSLCHP---SIVNGIAWCSLPGKGSKLHLLMATGCQSGLVCVWRIP 3701
Query: 79 DDEGQSYLTSGK 90
D Q+ +TS +
Sbjct: 3702 QDTTQTSVTSSE 3713
Score = 41 (19.5 bits), Expect = 1.9e-27, Sum P(3) = 1.9e-27
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 174 EEVVKRRKTSSAREESENPASGDEFFTLSPCL 205
EE+ KRR+ ++ S + + G T S L
Sbjct: 1461 EELQKRREEGQLQQPSTSTSEGGGLMTRSESL 1492
Score = 41 (19.5 bits), Expect = 2.3e-21, Sum P(3) = 2.3e-21
Identities = 9/41 (21%), Positives = 14/41 (34%)
Query: 115 HCVSVTEAGEVYTWGWRECVPSA-KVTRDFGSAGSFQKDST 154
HC+ + W W EC + K + F + T
Sbjct: 3906 HCLPDPASWNPNEWAWLECFSTTIKAAEALTNGAQFPESFT 3946
Score = 41 (19.5 bits), Expect = 2.8e-06, Sum P(4) = 2.8e-06
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 324 GSTNDQLRPSYASSLMDIQVEQI 346
G+ D+L P SL+D+ Q+
Sbjct: 1827 GTYADKLSPKVVQSLLDLLCSQL 1849
Score = 40 (19.1 bits), Expect = 1.2e-20, Sum P(3) = 1.2e-20
Identities = 7/11 (63%), Positives = 8/11 (72%)
Query: 119 VTEAGEVYTWG 129
V+E EVY WG
Sbjct: 368 VSETCEVYVWG 378
Score = 37 (18.1 bits), Expect = 5.0e-27, Sum P(3) = 5.0e-27
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 175 EVVKRRKTSSAREESENPASGD 196
E+++ R +S R SEN S D
Sbjct: 1314 ELIQTRSSSRDRWISENQDSAD 1335
Score = 37 (18.1 bits), Expect = 5.0e-27, Sum P(3) = 5.0e-27
Identities = 10/32 (31%), Positives = 14/32 (43%)
Query: 197 EFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
E L P L+ +I ++ G H L LS
Sbjct: 650 EATALRPKLIEELAATRIVDISIGDSHCLALS 681
Score = 37 (18.1 bits), Expect = 5.0e-27, Sum P(3) = 5.0e-27
Identities = 15/51 (29%), Positives = 23/51 (45%)
Query: 174 EEVVKRRKTSSAREESEN-PASGDEFFT-LSPCLVTLNPGVKITKVAAGGR 222
E+ +K +K EE EN P F + C + N G +T +GG+
Sbjct: 2007 EQEIKLQKQGELEEEDENLPIQEVSFDPEKAQCCIVEN-GQILTH-GSGGK 2055
>TAIR|locus:2146142 [details] [associations]
symbol:AT5G16040 "AT5G16040" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008536 "Ran GTPase binding" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688 EMBL:AL391145
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 UniGene:At.19750
UniGene:At.49027 EMBL:BT028960 IPI:IPI00525887 PIR:T51387
RefSeq:NP_197108.1 HSSP:O87916 ProteinModelPortal:Q9LFS0 SMR:Q9LFS0
PRIDE:Q9LFS0 EnsemblPlants:AT5G16040.1 GeneID:831461
KEGG:ath:AT5G16040 TAIR:At5g16040 InParanoid:Q9LFS0 OMA:TTGHPME
PhylomeDB:Q9LFS0 ProtClustDB:CLSN2686124 Genevestigator:Q9LFS0
Uniprot:Q9LFS0
Length = 396
Score = 240 (89.5 bits), Expect = 3.0e-27, Sum P(3) = 3.0e-27
Identities = 54/158 (34%), Positives = 80/158 (50%)
Query: 287 GRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQI 346
G V+ IA G H+ + + G L +G YGQ G G T + P L D+ + I
Sbjct: 194 GLENVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSYPIPVQGLDDLTLVDI 253
Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
AAG WH+ ++ EG VY +G + G+LG G + + + +L + VSCG H
Sbjct: 254 AAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGEDIIQVSCGGTH 313
Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIH 444
S LT DG++ S+G +G+LG G + P +PIH
Sbjct: 314 SVALTRDGRIFSFGRGDHGRLGYGRKVTTGQPLELPIH 351
Score = 227 (85.0 bits), Expect = 2.2e-16, P = 2.2e-16
Identities = 59/182 (32%), Positives = 88/182 (48%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHG-STNDQLRPSYASSLMDIQVEQIAAG 349
V+ + G R+S + D G L T+GW G GH T + PS SL ++++ Q A G
Sbjct: 40 VRSVVGGSRNSLAICDDGKLFTWGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIG 99
Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRA-----KVVSCGA 404
WH + + +GR Y +GGN++GQ G + E + ++ + A + V+ G
Sbjct: 100 GWHCLAVDDQGRAYAWGGNEYGQCGEEPSKDETGRPVRRDIVIPKRCAQQLTVRQVAAGG 159
Query: 405 RHSAVLTEDGQVLSWG--WNKYGQLGLGDSIDRNIPSLVPIHGFLP-RNIACGWWHTLLL 461
HS VLT +G V +WG W GD ++P V + G R IA G +H L L
Sbjct: 160 THSVVLTREGYVWTWGQPWPP------GDIKQISVP--VRVQGLENVRLIAVGAFHNLAL 211
Query: 462 AE 463
E
Sbjct: 212 KE 213
Score = 208 (78.3 bits), Expect = 8.4e-22, Sum P(2) = 8.4e-22
Identities = 60/201 (29%), Positives = 100/201 (49%)
Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL 330
RP VR+ V A + V+++A GG HS V+T G + T WG G
Sbjct: 134 RP--VRRDIVIPKRCAQQLTVRQVAAGGTHSVVLTREGYVWT--WGQ--PWPPGDIKQIS 187
Query: 331 RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETP 390
P L ++++ IA G +H + + +G ++ +G N++GQLGTG Q + P +
Sbjct: 188 VPVRVQGLENVRL--IAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSYP--IPVQ 243
Query: 391 ILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRN---IPSLVPI-HGF 446
L+ ++ G HS LT +G+V WG ++G+LG GD+ D++ +P V + G
Sbjct: 244 GLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDN-DKSSKMLPQKVNLLAGE 302
Query: 447 LPRNIACGWWHTLLLAETTQI 467
++CG H++ L +I
Sbjct: 303 DIIQVSCGGTHSVALTRDGRI 323
Score = 136 (52.9 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 41/138 (29%), Positives = 66/138 (47%)
Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN--DQLRPSYASSLMDIQVEQIAAGL 350
+IA GG HS +T+ G + +G G +G+ G G + ++ P + L + Q++ G
Sbjct: 252 DIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGEDIIQVSCGG 311
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL----ESKR---------- 396
H+V ++ +GR++ FG G+LG G P LE PI E +
Sbjct: 312 THSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQP--LELPIHIPPPEGRFNHTDEEDDGK 369
Query: 397 --AKVVSCGARHSAVLTE 412
AK V+CG RH+ + E
Sbjct: 370 WIAKHVACGGRHTLAIVE 387
Score = 135 (52.6 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 32/100 (32%), Positives = 53/100 (53%)
Query: 362 VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
V +G + GQLG G D+ + + +++ LE + V G+R+S + +DG++ +WGW
Sbjct: 7 VIAWGSGEDGQLGLGTDEEKELASVVDA--LEPFNVRSVVGGSRNSLAICDDGKLFTWGW 64
Query: 422 NKYGQLGLG-DSIDRNIPSLVP-IHGFLPRNIACGWWHTL 459
N+ G LG ++ + PSLV + A G WH L
Sbjct: 65 NQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGGWHCL 104
Score = 112 (44.5 bits), Expect = 3.0e-27, Sum P(3) = 3.0e-27
Identities = 35/124 (28%), Positives = 50/124 (40%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG +LA + GKL TWG + K TP +V+AA G HC+
Sbjct: 45 GGSRNSLAICDDGKLFTWGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGGWHCL 104
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSF-QKDSTGKQSALPTEQAPPSDKRAGEEV 176
+V + G Y WG E +G G KD TG+ P + KR +++
Sbjct: 105 AVDDQGRAYAWGGNE----------YGQCGEEPSKDETGR----PVRRDIVIPKRCAQQL 150
Query: 177 VKRR 180
R+
Sbjct: 151 TVRQ 154
Score = 108 (43.1 bits), Expect = 0.00032, Sum P(3) = 0.00032
Identities = 36/114 (31%), Positives = 56/114 (49%)
Query: 22 VYMWG--YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSAD 79
V+ WG + PG + S +P R+ G ++ + + G LA E G L WG+ +
Sbjct: 171 VWTWGQPWPPGDIKQIS-----VPVRVQGLENVRLIAVGAF-HNLALKEDGTLWAWGN-N 223
Query: 80 DEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSVTEAGEVYTWG 129
+ GQ L +G P +P+P + ++V AAG H ++T GEVY WG
Sbjct: 224 EYGQ--LGTGD--TQPRSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWG 273
Score = 78 (32.5 bits), Expect = 9.7e-24, Sum P(3) = 9.7e-24
Identities = 33/112 (29%), Positives = 47/112 (41%)
Query: 26 GYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSY 85
G+ P T E +P L A + + GG LA + G+ WG ++ GQ
Sbjct: 71 GHPPETKTESTPSLVKSLANV---KIVQAAIGGW--HCLAVDDQGRAYAWGG-NEYGQCG 124
Query: 86 LTSGKHGETPEP----FPLPT----EASVVKAAAGWAHCVSVTEAGEVYTWG 129
K ET P +P + +V + AAG H V +T G V+TWG
Sbjct: 125 EEPSKD-ETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLTREGYVWTWG 175
Score = 77 (32.2 bits), Expect = 4.8e-26, Sum P(4) = 4.8e-26
Identities = 16/61 (26%), Positives = 30/61 (49%)
Query: 72 LITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
+I WGS +D GQ L + + E +V G + +++ + G+++TWGW
Sbjct: 7 VIAWGSGED-GQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWGWN 65
Query: 132 E 132
+
Sbjct: 66 Q 66
Score = 55 (24.4 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 287 GRSYVKEIACGGRHSAVVTD 306
G+ K +ACGGRH+ + +
Sbjct: 368 GKWIAKHVACGGRHTLAIVE 387
Score = 51 (23.0 bits), Expect = 4.8e-26, Sum P(4) = 4.8e-26
Identities = 12/28 (42%), Positives = 15/28 (53%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSD 229
+P LV VKI + A GG H L + D
Sbjct: 81 TPSLVKSLANVKIVQAAIGGWHCLAVDD 108
Score = 45 (20.9 bits), Expect = 3.0e-27, Sum P(3) = 3.0e-27
Identities = 7/18 (38%), Positives = 13/18 (72%)
Query: 446 FLPRNIACGWWHTLLLAE 463
++ +++ACG HTL + E
Sbjct: 370 WIAKHVACGGRHTLAIVE 387
Score = 45 (20.9 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
D+ + P V L G I +V+ GG H++ L+
Sbjct: 286 DKSSKMLPQKVNLLAGEDIIQVSCGGTHSVALT 318
>UNIPROTKB|Q15751 [details] [associations]
symbol:HERC1 "Probable E3 ubiquitin-protein ligase HERC1"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0005086 "ARF
guanyl-nucleotide exchange factor activity" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=TAS] Pfam:PF00632
InterPro:IPR017986 InterPro:IPR000569 InterPro:IPR001680
InterPro:IPR003877 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 GO:GO:0005794 GO:GO:0016020 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 GO:GO:0005086
SUPFAM:SSF56204 eggNOG:COG5021 EMBL:U50078 EMBL:AC073167
EMBL:AC118274 EMBL:BC040929 IPI:IPI00022479 PIR:S71752
RefSeq:NP_003913.3 UniGene:Hs.210385 HSSP:Q922Y1
ProteinModelPortal:Q15751 SMR:Q15751 IntAct:Q15751 STRING:Q15751
PhosphoSite:Q15751 DMDM:296434522 PaxDb:Q15751 PRIDE:Q15751
Ensembl:ENST00000443617 GeneID:8925 KEGG:hsa:8925 UCSC:uc002amp.3
CTD:8925 GeneCards:GC15M063900 HGNC:HGNC:4867 HPA:HPA049749
MIM:605109 neXtProt:NX_Q15751 PharmGKB:PA29242 HOGENOM:HOG000168589
HOVERGEN:HBG053919 InParanoid:Q15751 KO:K10594 OMA:HHYQDGI
OrthoDB:EOG40GCPW GenomeRNAi:8925 NextBio:33556 ArrayExpress:Q15751
Bgee:Q15751 CleanEx:HS_HERC1 Genevestigator:Q15751 Uniprot:Q15751
Length = 4861
Score = 288 (106.4 bits), Expect = 4.1e-27, Sum P(3) = 4.1e-27
Identities = 65/179 (36%), Positives = 105/179 (58%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
V +++CG +HSAVVT G L TFG G YG+ G G+T+++ P ++L Q+ Q+A GL
Sbjct: 4136 VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGL 4195
Query: 351 WHTVCISVEGR-VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
HT+ +S +G V+ FG +G+LG G A++ P+ ++ +L K V+CG + S
Sbjct: 4196 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKID--VLCGIGIKKVACGTQFSVA 4253
Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI-HGFLPRNIACGWWHTLLLAETTQI 467
LT+DG V ++G ++ L G + + N P +P+ G + ++A G HTL LA +
Sbjct: 4254 LTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDV 4312
Score = 254 (94.5 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 62/178 (34%), Positives = 97/178 (54%)
Query: 289 SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQI 346
S + I G + V++ G++ G G YG+ G G +N+Q L+ I+
Sbjct: 403 SDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSS 462
Query: 347 AAGL-WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGAR 405
+ G HT+ + EG V+ +G +G+LG G + PKL++ P L+ K VS G R
Sbjct: 463 SKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP-LQGKVVVCVSAGYR 521
Query: 406 HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAE 463
HSA +TEDG++ +WG +G+LG GDS RNIP+LV + ++CG HT+ L++
Sbjct: 522 HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGE-VSCGSSHTIALSK 578
Score = 249 (92.7 bits), Expect = 4.2e-22, Sum P(3) = 4.2e-22
Identities = 54/178 (30%), Positives = 98/178 (55%)
Query: 289 SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
S +++ CG + V+ G +L G G YG+ G G+++D + S+L V Q+
Sbjct: 4027 SQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVT 4086
Query: 349 GLW---HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGAR 405
H++ ++ G V+ +G +G+LG G + P+ +E L+ + +SCG +
Sbjct: 4087 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA--LQGEEVVQMSCGFK 4144
Query: 406 HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLA 462
HSAV+T DG++ ++G YG+LGLG++ ++ +P V + G+ +ACG HTL ++
Sbjct: 4145 HSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVS 4202
Score = 248 (92.4 bits), Expect = 5.4e-22, Sum P(3) = 5.4e-22
Identities = 51/172 (29%), Positives = 99/172 (57%)
Query: 295 ACGGR-HSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
+CG HS +T++G + ++G G YG+ GHG+++ Q RP +L +V Q++ G H+
Sbjct: 4087 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4146
Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
++ +G+++ FG +G+LG G + +P+ + LE + V+CG H+ ++ D
Sbjct: 4147 AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA--LEGYQIGQVACGLNHTLAVSAD 4204
Query: 414 GQVL-SWGWNKYGQLGLGDSIDRNIPSLVPIH-GFLPRNIACGWWHTLLLAE 463
G ++ ++G YG+LGLG+S ++ P + + G + +ACG ++ L +
Sbjct: 4205 GSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTK 4256
Score = 209 (78.6 bits), Expect = 3.9e-18, Sum P(2) = 3.9e-18
Identities = 57/175 (32%), Positives = 88/175 (50%)
Query: 289 SYVKEIACGGRHS-AVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA 347
S V E++CG H+ A+ D + +FG G G+ GHG TN +P +L + + ++
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVC 620
Query: 348 AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV-PKLLETPILESKRAKVVSCGARH 406
AG ++ ++ G+VY +G LG G +A + PKL+E L + R VS G H
Sbjct: 621 AGSQSSLALTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEE--LAATRIVDVSIGDSH 676
Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDR-NIPSLVP-IHGFLPRNIACGWWHTL 459
L+ D +V +WG N GQ G G+S P V + G + I+ G H+L
Sbjct: 677 CLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731
Score = 171 (65.3 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 47/168 (27%), Positives = 78/168 (46%)
Query: 303 VVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRV 362
+V++ + +G Q G+ L+P A S D Q I AG + T IS +G V
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT--IEAGQYCTFVISTDGSV 424
Query: 363 YVFGGNQFGQLGTGVDQAEN-VPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
G +G+LG G ++ + KL P K+ H+ T +G+V SWG
Sbjct: 425 RACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGD 484
Query: 422 NKYGQLGLGDSIDRNIPSLV--PIHGFLPRNIACGWWHTLLLAETTQI 467
YG+LG G+S + P L+ P+ G + ++ G+ H+ + E ++
Sbjct: 485 GDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGEL 532
Score = 167 (63.8 bits), Expect = 9.7e-13, Sum P(3) = 9.7e-13
Identities = 49/157 (31%), Positives = 72/157 (45%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
+K++ACG + S +T G + TFG G + RP L + +E +A G
Sbjct: 4241 IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGA 4300
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
HT+ ++ G VY +G N GQLG G P L+ L+ K + +S G HSA
Sbjct: 4301 EHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTG--LQGKNVRQISAGRCHSAAW 4358
Query: 411 TEDG-QVLSWGWNKYGQLGLGDSIDRNIPSL--VPIH 444
T + G + QLGL D++ +L V IH
Sbjct: 4359 TAPPVPPRAPGVSVPLQLGLPDTVPPQYGALREVSIH 4395
Score = 112 (44.5 bits), Expect = 5.5e-06, Sum P(4) = 5.5e-06
Identities = 34/121 (28%), Positives = 62/121 (51%)
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
WH + + VY++G + GQL + NV P +A+ V CG + V+
Sbjct: 3991 WH---LGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFS--QAQQVICGQNCTFVI 4042
Query: 411 TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNI--ACGW-WHTLLLAETTQ 466
+G VL+ G YG+LG G+S D ++ +++ + GF+ + +CG H++ L E+ +
Sbjct: 4043 QANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGE 4102
Query: 467 I 467
+
Sbjct: 4103 V 4103
Score = 106 (42.4 bits), Expect = 4.1e-27, Sum P(3) = 4.1e-27
Identities = 25/73 (34%), Positives = 37/73 (50%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA-AAGWAHC 116
G G LA + G++ +WG D + S + P+ P + VV +AG+ H
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ-KYPKLIQGPLQGKVVVCVSAGYRHS 523
Query: 117 VSVTEAGEVYTWG 129
+VTE GE+YTWG
Sbjct: 524 AAVTEDGELYTWG 536
Score = 89 (36.4 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 22/74 (29%), Positives = 38/74 (51%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAH 115
CG G ++A +ESG++ +WG D + S + + L E VV+ + G+ H
Sbjct: 4088 CGSD-GHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGE-EVVQMSCGFKH 4145
Query: 116 CVSVTEAGEVYTWG 129
VT G+++T+G
Sbjct: 4146 SAVVTSDGKLFTFG 4159
Score = 78 (32.5 bits), Expect = 3.2e-24, Sum P(3) = 3.2e-24
Identities = 20/77 (25%), Positives = 35/77 (45%)
Query: 53 KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAG 112
+ VC G +LA + +G++ WG G +S P+ +V + G
Sbjct: 617 RKVCAGSQS-SLALTSTGQVYAWGCGACLGCG--SSEATALRPKLIEELAATRIVDVSIG 673
Query: 113 WAHCVSVTEAGEVYTWG 129
+HC++++ EVY WG
Sbjct: 674 DSHCLALSHDNEVYAWG 690
Score = 74 (31.1 bits), Expect = 8.2e-24, Sum P(3) = 8.2e-24
Identities = 28/93 (30%), Positives = 43/93 (46%)
Query: 53 KDVCGGG---CGFA--LATSESGKLITWG-SADDEGQSYLTSGKHGETPEPF-PLPTEAS 105
KD+ G CG + +A S+ G+ + W D G+ G HG+T + P EA
Sbjct: 558 KDISNVGEVSCGSSHTIALSKDGRTV-WSFGGGDNGKL----G-HGDTNRVYKPKVIEAL 611
Query: 106 ----VVKAAAGWAHCVSVTEAGEVYTWGWRECV 134
+ K AG +++T G+VY WG C+
Sbjct: 612 QGMFIRKVCAGSQSSLALTSTGQVYAWGCGACL 644
Score = 68 (29.0 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 24/81 (29%), Positives = 41/81 (50%)
Query: 53 KDVCGGGCGF---ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA 109
++V CGF A+ TS+ GKL T+G+ D G+ L + + + PE + +
Sbjct: 4134 EEVVQMSCGFKHSAVVTSD-GKLFTFGNGD-YGRLGLGNTSNKKLPERVTALEGYQIGQV 4191
Query: 110 AAGWAHCVSVTEAGE-VYTWG 129
A G H ++V+ G V+ +G
Sbjct: 4192 ACGLNHTLAVSADGSMVWAFG 4212
Score = 66 (28.3 bits), Expect = 3.0e-23, Sum P(2) = 3.0e-23
Identities = 24/97 (24%), Positives = 41/97 (42%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
P +P S +CG + + G A G+L G++DD + S G
Sbjct: 4020 PAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRL-GQGNSDDLHVLTVISALQG 4078
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
F + +V + H +++TE+GEV++WG
Sbjct: 4079 -----FVV---TQLVTSCGSDGHSMALTESGEVFSWG 4107
Score = 66 (28.3 bits), Expect = 5.5e-23, Sum P(3) = 5.5e-23
Identities = 21/77 (27%), Positives = 39/77 (50%)
Query: 55 VC-GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGW 113
VC G + A +E G+L TWG D G+ L G P + ++V + + G
Sbjct: 514 VCVSAGYRHSAAVTEDGELYTWGEGDF-GR--LGHGDSNSRNIPTLVKDISNVGEVSCGS 570
Query: 114 AHCVSVTEAGE-VYTWG 129
+H +++++ G V+++G
Sbjct: 571 SHTIALSKDGRTVWSFG 587
Score = 46 (21.3 bits), Expect = 3.7e-21, Sum P(2) = 3.7e-21
Identities = 19/72 (26%), Positives = 30/72 (41%)
Query: 22 VYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFAL--ATS-ESGKLITWGSA 78
V +WG + G + P + G +W + G G L AT +SG + W
Sbjct: 3650 VKLWGSISGCWCCLHSLCHP---SIVNGIAWCRLPGKGSKLQLLMATGCQSGLVCVWRIP 3706
Query: 79 DDEGQSYLTSGK 90
D Q+ +TS +
Sbjct: 3707 QDTTQTNVTSAE 3718
Score = 42 (19.8 bits), Expect = 4.1e-27, Sum P(3) = 4.1e-27
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 158 SALPTEQA--PPSDK---RAGEEVVKRRKTSSAREESENPAS 194
+ LPT +A PP +EV +R+ +S +S PA+
Sbjct: 2692 TVLPTRRAQTPPISSLPTSPSDEVGRRQSLTSPDSQSARPAN 2733
Score = 41 (19.5 bits), Expect = 5.5e-06, Sum P(4) = 5.5e-06
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 324 GSTNDQLRPSYASSLMDIQVEQI 346
G+ D+L P SL+D+ Q+
Sbjct: 1827 GTYADKLSPKVVQSLLDLLCSQL 1849
Score = 40 (19.1 bits), Expect = 2.6e-20, Sum P(3) = 2.6e-20
Identities = 7/11 (63%), Positives = 8/11 (72%)
Query: 119 VTEAGEVYTWG 129
V+E EVY WG
Sbjct: 368 VSETCEVYVWG 378
Score = 38 (18.4 bits), Expect = 1.1e-26, Sum P(3) = 1.1e-26
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 174 EEVVKRRKTSSAREESENPASGDEFFTLSPCL 205
+E+ KRR+ ++ S + + G T S L
Sbjct: 1461 DELQKRREEGQLQQPSTSASEGGGLMTRSESL 1492
Score = 38 (18.4 bits), Expect = 1.1e-26, Sum P(3) = 1.1e-26
Identities = 11/32 (34%), Positives = 14/32 (43%)
Query: 197 EFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
E L P L+ +I V+ G H L LS
Sbjct: 650 EATALRPKLIEELAATRIVDVSIGDSHCLALS 681
Score = 37 (18.1 bits), Expect = 1.3e-26, Sum P(3) = 1.3e-26
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 175 EVVKRRKTSSAREESENPASGD 196
E+++ R +S R SEN S D
Sbjct: 1314 ELIQTRSSSRDRWISENQDSAD 1335
>UNIPROTKB|E1C4H7 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] Pfam:PF00632 InterPro:IPR017986
InterPro:IPR000569 InterPro:IPR001680 InterPro:IPR003877
InterPro:IPR015880 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 SMART:SM00355 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008270 GO:GO:0016567 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 SUPFAM:SSF56204
OMA:HHYQDGI GeneTree:ENSGT00700000104312 EMBL:AADN02040444
EMBL:AADN02040445 EMBL:AADN02040446 IPI:IPI00593079
Ensembl:ENSGALT00000005344 Uniprot:E1C4H7
Length = 4863
Score = 288 (106.4 bits), Expect = 1.1e-26, Sum P(3) = 1.1e-26
Identities = 70/181 (38%), Positives = 105/181 (58%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
V +++CG +HSAVVT G L TFG G YG+ G G+T+++ P ++L Q+ Q+A GL
Sbjct: 4136 VVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGL 4195
Query: 351 WHTVCISVEGR-VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
HTV +S +G V+ FG +G+LG G A++ P+ ++ IL K V+CG + S
Sbjct: 4196 NHTVAVSTDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVD--ILCGIGIKKVACGTQFSVA 4253
Query: 410 LTEDGQVLSWGWNKYGQLGL--GDSIDRNIPSLVPI-HGFLPRNIACGWWHTLLLAETTQ 466
LT+DG V ++G +GL G + + N P VP+ G +IA G HTL L+ T
Sbjct: 4254 LTKDGHVYTFGQVSDRLIGLPEGRARNHNRPQQVPVLSGVFIEDIAVGAEHTLALSSTGD 4313
Query: 467 I 467
+
Sbjct: 4314 V 4314
Score = 254 (94.5 bits), Expect = 2.2e-16, Sum P(2) = 2.2e-16
Identities = 62/178 (34%), Positives = 97/178 (54%)
Query: 289 SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQI 346
S + I G + V++ G++ G G YG+ G G +N+Q L+ I+
Sbjct: 403 SDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSS 462
Query: 347 AAGL-WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGAR 405
+ G HT+ + EG V+ +G +G+LG G + PKL++ P L+ K VS G R
Sbjct: 463 SKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP-LQGKVVVCVSAGYR 521
Query: 406 HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAE 463
HSA +TEDG++ +WG +G+LG GDS RNIP+LV + ++CG HT+ L++
Sbjct: 522 HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGE-VSCGSSHTIALSK 578
Score = 253 (94.1 bits), Expect = 3.6e-22, Sum P(3) = 3.6e-22
Identities = 53/172 (30%), Positives = 99/172 (57%)
Query: 295 ACGGR-HSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
+CG HS +T++G + ++G G YG+ GHG+++ Q RP +L +V Q++ G H+
Sbjct: 4087 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4146
Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
++ +G+++ FG +G+LG G + +P+ + LE + V+CG H+ ++ D
Sbjct: 4147 AVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTA--LEGYQIGQVACGLNHTVAVSTD 4204
Query: 414 GQVL-SWGWNKYGQLGLGDSIDRNIPSLVPIH-GFLPRNIACGWWHTLLLAE 463
G ++ ++G YG+LGLG+S ++ P V I G + +ACG ++ L +
Sbjct: 4205 GSMVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTK 4256
Score = 246 (91.7 bits), Expect = 2.5e-21, Sum P(3) = 2.5e-21
Identities = 53/178 (29%), Positives = 98/178 (55%)
Query: 289 SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
S +++ CG + V+ G +L G G YG+ G G+++D + S+L V Q+
Sbjct: 4027 SQAQQVVCGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVT 4086
Query: 349 GLW---HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGAR 405
H++ ++ G V+ +G +G+LG G + P+ +E L+ + +SCG +
Sbjct: 4087 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA--LQGEEVVQMSCGFK 4144
Query: 406 HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLA 462
HSAV+T DG++ ++G YG+LGLG++ ++ +P V + G+ +ACG HT+ ++
Sbjct: 4145 HSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAVS 4202
Score = 224 (83.9 bits), Expect = 9.6e-19, Sum P(3) = 9.6e-19
Identities = 53/170 (31%), Positives = 87/170 (51%)
Query: 291 VKEIACGGRHS-AVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAG 349
+ ++ACG H+ AV TD + FG G YG+ G G++ + P L I ++++A G
Sbjct: 4188 IGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKVACG 4247
Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
+V ++ +G VY FG +G +A N + + P+L + ++ GA H+
Sbjct: 4248 TQFSVALTKDGHVYTFGQVSDRLIGLPEGRARNHNRPQQVPVLSGVFIEDIAVGAEHTLA 4307
Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI-HGFLPRNIACGWWHT 458
L+ G V +WG N GQLGLG + P+L+ + G R I+ G H+
Sbjct: 4308 LSSTGDVYAWGSNSEGQLGLGHTNHVREPTLITVLQGKNIRQISAGRCHS 4357
Score = 206 (77.6 bits), Expect = 8.5e-18, Sum P(2) = 8.5e-18
Identities = 56/175 (32%), Positives = 88/175 (50%)
Query: 289 SYVKEIACGGRHS-AVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA 347
S V E++CG H+ A+ D + +FG G G+ GHG TN +P +L + + ++
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVC 620
Query: 348 AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV-PKLLETPILESKRAKVVSCGARH 406
AG ++ ++ G+VY +G LG G +A + PKL+E L + R +S G H
Sbjct: 621 AGSQSSLALTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEE--LAATRIVDISIGDSH 676
Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDR-NIPSLVP-IHGFLPRNIACGWWHTL 459
L+ D +V +WG N GQ G G+S P V + G + I+ G H+L
Sbjct: 677 CLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVSIQQISAGTSHSL 731
Score = 172 (65.6 bits), Expect = 7.0e-13, Sum P(3) = 7.0e-13
Identities = 53/159 (33%), Positives = 74/159 (46%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCG--HGSTNDQLRPSYASSLMDIQVEQIAA 348
+K++ACG + S +T G + TFG G G + RP L + +E IA
Sbjct: 4241 IKKVACGTQFSVALTKDGHVYTFGQVSDRLIGLPEGRARNHNRPQQVPVLSGVFIEDIAV 4300
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
G HT+ +S G VY +G N GQLG G P L+ +L+ K + +S G HSA
Sbjct: 4301 GAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREPTLIT--VLQGKNIRQISAGRCHSA 4358
Query: 409 VLTEDG-QVLSWGWNKYGQLGLGDSIDRNIPSL--VPIH 444
T + G + QLGL D+I +L V IH
Sbjct: 4359 AWTAPPVPPRAPGVSVPLQLGLPDAIPPQYGALKEVSIH 4397
Score = 171 (65.3 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 47/168 (27%), Positives = 78/168 (46%)
Query: 303 VVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRV 362
+V++ + +G Q G+ L+P A S D Q I AG + T IS +G V
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT--IEAGQYCTFVISTDGSV 424
Query: 363 YVFGGNQFGQLGTGVDQAEN-VPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
G +G+LG G ++ + KL P K+ H+ T +G+V SWG
Sbjct: 425 RACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGD 484
Query: 422 NKYGQLGLGDSIDRNIPSLV--PIHGFLPRNIACGWWHTLLLAETTQI 467
YG+LG G+S + P L+ P+ G + ++ G+ H+ + E ++
Sbjct: 485 GDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGEL 532
Score = 114 (45.2 bits), Expect = 3.4e-06, Sum P(4) = 3.4e-06
Identities = 34/121 (28%), Positives = 63/121 (52%)
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
WH + + VY++G + GQL + NV + P +A+ V CG + V+
Sbjct: 3991 WH---LGGKCDVYLWGAGRHGQLA---EAGRNVMVPVAAPSFS--QAQQVVCGQNCTFVI 4042
Query: 411 TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNI--ACGW-WHTLLLAETTQ 466
+G VL+ G YG+LG G+S D ++ +++ + GF+ + +CG H++ L E+ +
Sbjct: 4043 QANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGE 4102
Query: 467 I 467
+
Sbjct: 4103 V 4103
Score = 106 (42.4 bits), Expect = 1.1e-26, Sum P(3) = 1.1e-26
Identities = 25/73 (34%), Positives = 37/73 (50%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA-AAGWAHC 116
G G LA + G++ +WG D + S + P+ P + VV +AG+ H
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ-KYPKLIQGPLQGKVVVCVSAGYRHS 523
Query: 117 VSVTEAGEVYTWG 129
+VTE GE+YTWG
Sbjct: 524 AAVTEDGELYTWG 536
Score = 93 (37.8 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 19/64 (29%), Positives = 33/64 (51%)
Query: 290 YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAG 349
++++IA G H+ ++ G + +G GQ G G TN P+ + L + QI+AG
Sbjct: 4294 FIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREPTLITVLQGKNIRQISAG 4353
Query: 350 LWHT 353
H+
Sbjct: 4354 RCHS 4357
Score = 88 (36.0 bits), Expect = 6.1e-18, Sum P(2) = 6.1e-18
Identities = 22/74 (29%), Positives = 38/74 (51%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAH 115
CG G ++A +ESG++ +WG D + S + + L E VV+ + G+ H
Sbjct: 4088 CGSD-GHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGE-EVVQMSCGFKH 4145
Query: 116 CVSVTEAGEVYTWG 129
VT G+++T+G
Sbjct: 4146 SAVVTADGKLFTFG 4159
Score = 77 (32.2 bits), Expect = 1.0e-23, Sum P(3) = 1.0e-23
Identities = 20/77 (25%), Positives = 35/77 (45%)
Query: 53 KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAG 112
+ VC G +LA + +G++ WG G +S P+ +V + G
Sbjct: 617 RKVCAGSQS-SLALTSTGQVYAWGCGACLGCG--SSEATALRPKLIEELAATRIVDISIG 673
Query: 113 WAHCVSVTEAGEVYTWG 129
+HC++++ EVY WG
Sbjct: 674 DSHCLALSHDNEVYAWG 690
Score = 74 (31.1 bits), Expect = 2.1e-23, Sum P(3) = 2.1e-23
Identities = 28/93 (30%), Positives = 43/93 (46%)
Query: 53 KDVCGGG---CGFA--LATSESGKLITWG-SADDEGQSYLTSGKHGETPEPF-PLPTEAS 105
KD+ G CG + +A S+ G+ + W D G+ G HG+T + P EA
Sbjct: 558 KDISNVGEVSCGSSHTIALSKDGRTV-WSFGGGDNGKL----G-HGDTNRVYKPKVIEAL 611
Query: 106 ----VVKAAAGWAHCVSVTEAGEVYTWGWRECV 134
+ K AG +++T G+VY WG C+
Sbjct: 612 QGMFIRKVCAGSQSSLALTSTGQVYAWGCGACL 644
Score = 69 (29.3 bits), Expect = 1.5e-23, Sum P(2) = 1.5e-23
Identities = 28/111 (25%), Positives = 46/111 (41%)
Query: 22 VYMWGY-LPGTSPEKSP-ILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSAD 79
VY+WG G E ++ P+ A + + VCG C F + + + GS
Sbjct: 3999 VYLWGAGRHGQLAEAGRNVMVPVAAPSFS-QAQQVVCGQNCTFVIQANGTVLACGEGSYG 4057
Query: 80 DEGQSYLTSGKHGETP-EPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
GQ + H T +V + H +++TE+GEV++WG
Sbjct: 4058 RLGQGN-SDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWG 4107
Score = 69 (29.3 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 24/81 (29%), Positives = 41/81 (50%)
Query: 53 KDVCGGGCGF---ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA 109
++V CGF A+ T++ GKL T+G+ D G+ L + + + PE + +
Sbjct: 4134 EEVVQMSCGFKHSAVVTAD-GKLFTFGNGD-YGRLGLGNTSNKKLPERVTALEGYQIGQV 4191
Query: 110 AAGWAHCVSV-TEAGEVYTWG 129
A G H V+V T+ V+ +G
Sbjct: 4192 ACGLNHTVAVSTDGSMVWAFG 4212
Score = 66 (28.3 bits), Expect = 1.4e-22, Sum P(3) = 1.4e-22
Identities = 21/77 (27%), Positives = 39/77 (50%)
Query: 55 VC-GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGW 113
VC G + A +E G+L TWG D G+ L G P + ++V + + G
Sbjct: 514 VCVSAGYRHSAAVTEDGELYTWGEGDF-GR--LGHGDSNSRNIPTLVKDISNVGEVSCGS 570
Query: 114 AHCVSVTEAGE-VYTWG 129
+H +++++ G V+++G
Sbjct: 571 SHTIALSKDGRTVWSFG 587
Score = 41 (19.5 bits), Expect = 3.4e-06, Sum P(4) = 3.4e-06
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 324 GSTNDQLRPSYASSLMDIQVEQI 346
G+ D+L P SL+D+ Q+
Sbjct: 1827 GTYADKLSPKVVQSLLDLLCSQL 1849
Score = 40 (19.1 bits), Expect = 6.7e-20, Sum P(3) = 6.7e-20
Identities = 7/11 (63%), Positives = 8/11 (72%)
Query: 119 VTEAGEVYTWG 129
V+E EVY WG
Sbjct: 368 VSETCEVYVWG 378
Score = 38 (18.4 bits), Expect = 1.1e-26, Sum P(3) = 1.1e-26
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 211 GVKITKVAAGGRHTL 225
GV I +++AG H+L
Sbjct: 717 GVSIQQISAGTSHSL 731
Score = 38 (18.4 bits), Expect = 1.1e-26, Sum P(3) = 1.1e-26
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 170 KRAGEEVVKRRKTSS-----AREESEN 191
K AG+++ K R S REE EN
Sbjct: 2249 KEAGQKLKKSRSIQSREENEVREEKEN 2275
Score = 37 (18.1 bits), Expect = 1.3e-26, Sum P(3) = 1.3e-26
Identities = 10/32 (31%), Positives = 14/32 (43%)
Query: 197 EFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
E L P L+ +I ++ G H L LS
Sbjct: 650 EATALRPKLIEELAATRIVDISIGDSHCLALS 681
>MGI|MGI:1914595 [details] [associations]
symbol:Herc4 "hect domain and RLD 4" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA;TAS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0006464 "cellular protein modification process"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IMP]
[GO:0016567 "protein ubiquitination" evidence=TAS] [GO:0016874
"ligase activity" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 MGI:MGI:1914595 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 GO:GO:0005634 GO:GO:0005737 GO:GO:0030154
GO:GO:0007283 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00660000095216 HOVERGEN:HBG050878 HSSP:Q9UEP9
CTD:26091 KO:K10615 EMBL:AK009436 EMBL:AK143111 EMBL:AK145735
EMBL:AK147723 EMBL:BC026855 EMBL:BC043082 EMBL:BC047157
EMBL:BC060033 IPI:IPI00453903 IPI:IPI00554980 IPI:IPI00828240
RefSeq:NP_080377.2 RefSeq:NP_084390.1 UniGene:Mm.234437
UniGene:Mm.422789 UniGene:Mm.441725 UniGene:Mm.487274
ProteinModelPortal:Q6PAV2 SMR:Q6PAV2 STRING:Q6PAV2
PhosphoSite:Q6PAV2 PaxDb:Q6PAV2 PRIDE:Q6PAV2
Ensembl:ENSMUST00000020258 GeneID:67345 KEGG:mmu:67345
UCSC:uc007fka.2 UCSC:uc007fkc.2 UCSC:uc007fkd.2 InParanoid:Q6PAV2
OMA:KLVIQPT OrthoDB:EOG44XJG1 NextBio:324318 Bgee:Q6PAV2
CleanEx:MM_HERC4 Genevestigator:Q6PAV2 Uniprot:Q6PAV2
Length = 1057
Score = 280 (103.6 bits), Expect = 6.2e-26, Sum P(2) = 6.2e-26
Identities = 66/175 (37%), Positives = 100/175 (57%)
Query: 294 IACGGRHSAVVTDAGALLTFGWGLY--GQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGL 350
+ACG H+ + D G + + WGL GQ G + + +R P SL DIQ+ Q+A G
Sbjct: 89 VACGEAHTLALNDKGQV--YAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGY 146
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVD-QAENVPKLLETPILESKRAKVVSCGARHSAV 409
+H++ +S V+ +G N++GQLG G+D Q + P+L+++ +L +V + GA HS V
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKS-LLGIPFMQVAAGGA-HSFV 204
Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
LT G + WG NK+GQLGL D DR +P+L+ + I CG HT L +
Sbjct: 205 LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK 259
Score = 235 (87.8 bits), Expect = 9.5e-16, Sum P(2) = 9.5e-16
Identities = 58/174 (33%), Positives = 92/174 (52%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
V+++ CG RH+ V D G + T G GQ GH + +P +L + +A G
Sbjct: 36 VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVACGE 93
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGT-GVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
HT+ ++ +G+VY +G + GQLG G ++ VP+ +++ L + V+CG HS
Sbjct: 94 AHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKS--LSDIQIVQVACGYYHSLA 151
Query: 410 LTEDGQVLSWGWNKYGQLGLG-DSIDRNIPSLVP-IHGFLPRNIACGWWHTLLL 461
L++ +V WG NKYGQLGLG D + P L+ + G +A G H+ +L
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVL 205
Score = 220 (82.5 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 54/165 (32%), Positives = 89/165 (53%)
Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
+L +G YGQ G G +++ L P + ++ +V + GL HTV + +G VY G
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
N GQLG +++ P+ + L+++ V+CG H+ L + GQV +WG + GQL
Sbjct: 61 NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
GL S + RNI SL I +ACG++H+L L++ +++
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALSKASEV 158
Score = 218 (81.8 bits), Expect = 2.4e-21, Sum P(3) = 2.4e-21
Identities = 56/153 (36%), Positives = 79/153 (51%)
Query: 293 EIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
++A GG HS V+T +GA+ FGWG +GQ G ND+ P+ SL ++ I G
Sbjct: 194 QVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGE 251
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGARH-SA 408
HT ++ EG V+ FG +GQLG E N K+ E L V+CG +H SA
Sbjct: 252 DHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE---LMGSIVTQVACGRQHTSA 308
Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
+ G++ S+G GQLG G + +R P V
Sbjct: 309 FVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 100 (40.3 bits), Expect = 2.4e-21, Sum P(3) = 2.4e-21
Identities = 24/90 (26%), Positives = 47/90 (52%)
Query: 43 PARLCGGDSWKDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFP 99
P ++ D+ +++ CG A LA ++ G++ WG D +GQ L + P
Sbjct: 75 PEQVVALDA-QNIVAVACGEAHTLALNDKGQVYAWG-LDSDGQLGLQGSEECIRVPRNIK 132
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
++ +V+ A G+ H +++++A EV+ WG
Sbjct: 133 SLSDIQIVQVACGYYHSLALSKASEVFCWG 162
Score = 92 (37.4 bits), Expect = 2.4e-07, Sum P(3) = 2.4e-07
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 289 SYVKEIACGGRH-SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
S V ++ACG +H SA V +G + +FG G GQ G GST+++ P
Sbjct: 294 SIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
Score = 86 (35.3 bits), Expect = 6.2e-26, Sum P(2) = 6.2e-26
Identities = 25/79 (31%), Positives = 37/79 (46%)
Query: 53 KDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
K V GCG + + G + T G +D GQ L K + PE ++V A
Sbjct: 34 KKVRDVGCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVA 90
Query: 111 AGWAHCVSVTEAGEVYTWG 129
G AH +++ + G+VY WG
Sbjct: 91 CGEAHTLALNDKGQVYAWG 109
Score = 54 (24.1 bits), Expect = 2.4e-21, Sum P(3) = 2.4e-21
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILS 228
SP L+ G+ +VAAGG H+ +L+
Sbjct: 180 SPQLIKSLLGIPFMQVAAGGAHSFVLT 206
Score = 41 (19.5 bits), Expect = 3.1e-21, Sum P(2) = 3.1e-21
Identities = 9/16 (56%), Positives = 10/16 (62%)
Query: 214 ITKVAAGGRHTLILSD 229
I VA G HTL L+D
Sbjct: 86 IVAVACGEAHTLALND 101
Score = 40 (19.1 bits), Expect = 3.9e-21, Sum P(2) = 3.9e-21
Identities = 11/34 (32%), Positives = 14/34 (41%)
Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
DE L P K+ V G RHT+ + D
Sbjct: 18 DEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLD 51
Score = 38 (18.4 bits), Expect = 2.9e-18, Sum P(3) = 2.9e-18
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 212 VKITKVAAGGRHTLILS 228
++I +VA G H+L LS
Sbjct: 137 IQIVQVACGYYHSLALS 153
>TAIR|locus:2076889 [details] [associations]
symbol:AT3G02510 "AT3G02510" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
[GO:0008536 "Ran GTPase binding" evidence=ISS] INTERPRO:IPR000408
Pfam:PF00415 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 UniGene:At.20016
UniGene:At.41128 EMBL:AK227929 IPI:IPI00539921 RefSeq:NP_186900.3
UniGene:At.70614 ProteinModelPortal:Q0WSJ9 SMR:Q0WSJ9 PRIDE:Q0WSJ9
EnsemblPlants:AT3G02510.1 GeneID:821100 KEGG:ath:AT3G02510
TAIR:At3g02510 OMA:NGGVQCW PhylomeDB:Q0WSJ9 Genevestigator:Q2V3Z2
Uniprot:Q0WSJ9
Length = 393
Score = 235 (87.8 bits), Expect = 7.9e-25, Sum P(4) = 7.9e-25
Identities = 55/159 (34%), Positives = 82/159 (51%)
Query: 287 GRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQI 346
G V+ IA G H+ + + G LL +G YGQ G G T P L D+ + I
Sbjct: 194 GLENVRLIAVGAFHNLALEEDGRLLAWGNNEYGQLGTGDTQPTSHPVPVQGLDDLTLVDI 253
Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAEN--VPKLLETPILESKRAKVVSCGA 404
AAG WH+ ++ +G VY +G + G+LG G + + VP+ + +L + VSCG
Sbjct: 254 AAGGWHSTALTDKGEVYGWGRGEHGRLGLGDNDKSSKMVPQKVN--LLAEEDIIQVSCGG 311
Query: 405 RHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
HS LT DG++ S+G +G+LG G + P +PI
Sbjct: 312 THSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQPLELPI 350
Score = 220 (82.5 bits), Expect = 3.1e-16, Sum P(2) = 3.1e-16
Identities = 59/183 (32%), Positives = 90/183 (49%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHG-STNDQLRPSYASSLMDIQVEQIAAG 349
V+ + G R+S + D G + T+GW G GH T + PS +L ++++ Q A G
Sbjct: 40 VRSVVSGSRNSLAICDDGTMFTWGWNQRGTLGHQPETKTENIPSRVKALANVKITQAAIG 99
Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRA------KVVSCG 403
WH + + +GR Y +GGN++GQ G + E + + + I+ KR + V+ G
Sbjct: 100 GWHCLAVDDQGRAYAWGGNEYGQCGEEPLKDE-MGRPVRRDIVIPKRCAPKLTVRQVAAG 158
Query: 404 ARHSAVLTEDGQVLSWG--WNKYGQLGLGDSIDRNIPSLVPIHGFLP-RNIACGWWHTLL 460
HS VLT +G V +WG W GD ++P V + G R IA G +H L
Sbjct: 159 GTHSVVLTREGHVWTWGQPWPP------GDIKQISVP--VRVQGLENVRLIAVGAFHNLA 210
Query: 461 LAE 463
L E
Sbjct: 211 LEE 213
Score = 211 (79.3 bits), Expect = 2.2e-21, Sum P(4) = 2.2e-21
Identities = 62/202 (30%), Positives = 103/202 (50%)
Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL 330
RP VR+ V A + V+++A GG HS V+T G + T WG G
Sbjct: 134 RP--VRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTREGHVWT--WGQ--PWPPGDIKQIS 187
Query: 331 RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETP 390
P L ++++ IA G +H + + +GR+ +G N++GQLGTG Q + P ++
Sbjct: 188 VPVRVQGLENVRL--IAVGAFHNLALEEDGRLLAWGNNEYGQLGTGDTQPTSHPVPVQG- 244
Query: 391 ILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP--IHGFLP 448
L+ ++ G HS LT+ G+V WG ++G+LGLGD+ D++ +VP ++
Sbjct: 245 -LDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGLGDN-DKS-SKMVPQKVNLLAE 301
Query: 449 RNI---ACGWWHTLLLAETTQI 467
+I +CG H++ L +I
Sbjct: 302 EDIIQVSCGGTHSVALTRDGRI 323
Score = 147 (56.8 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 42/138 (30%), Positives = 67/138 (48%)
Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN--DQLRPSYASSLMDIQVEQIAAGL 350
+IA GG HS +TD G + +G G +G+ G G + ++ P + L + + Q++ G
Sbjct: 252 DIAAGGWHSTALTDKGEVYGWGRGEHGRLGLGDNDKSSKMVPQKVNLLAEEDIIQVSCGG 311
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL---------------ESK 395
H+V ++ +GR++ FG G+LG G P LE PI E K
Sbjct: 312 THSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQP--LELPIKIPPPEGSFNHTDEEEEGK 369
Query: 396 -RAKVVSCGARHSAVLTE 412
AK ++CG RH+ + E
Sbjct: 370 WSAKSIACGGRHTLAIVE 387
Score = 132 (51.5 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 32/100 (32%), Positives = 51/100 (51%)
Query: 362 VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
+ +G + GQLG G ++ + ++E LE + V G+R+S + +DG + +WGW
Sbjct: 7 IIAWGSGEDGQLGIGTNEEKEWACVVEA--LEPYSVRSVVSGSRNSLAICDDGTMFTWGW 64
Query: 422 NKYGQLG-LGDSIDRNIPSLVP-IHGFLPRNIACGWWHTL 459
N+ G LG ++ NIPS V + A G WH L
Sbjct: 65 NQRGTLGHQPETKTENIPSRVKALANVKITQAAIGGWHCL 104
Score = 120 (47.3 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 36/112 (32%), Positives = 58/112 (51%)
Query: 22 VYMWG--YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSAD 79
V+ WG + PG + S +P R+ G ++ + + G LA E G+L+ WG+ +
Sbjct: 171 VWTWGQPWPPGDIKQIS-----VPVRVQGLENVRLIAVGAF-HNLALEEDGRLLAWGN-N 223
Query: 80 DEGQSYLTSGKHGETPEPFPLP--TEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ GQ L +G T P P+ + ++V AAG H ++T+ GEVY WG
Sbjct: 224 EYGQ--LGTGDTQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGWG 273
Score = 89 (36.4 bits), Expect = 4.2e-24, Sum P(3) = 4.2e-24
Identities = 19/70 (27%), Positives = 28/70 (40%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
+LA + G + TWG + K P + +AA G HC++V +
Sbjct: 50 SLAICDDGTMFTWGWNQRGTLGHQPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQ 109
Query: 123 GEVYTWGWRE 132
G Y WG E
Sbjct: 110 GRAYAWGGNE 119
Score = 74 (31.1 bits), Expect = 7.9e-25, Sum P(4) = 7.9e-25
Identities = 16/61 (26%), Positives = 30/61 (49%)
Query: 72 LITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
+I WGS +D GQ + + + E SV +G + +++ + G ++TWGW
Sbjct: 7 IIAWGSGED-GQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWGWN 65
Query: 132 E 132
+
Sbjct: 66 Q 66
Score = 74 (31.1 bits), Expect = 1.5e-22, Sum P(3) = 1.5e-22
Identities = 30/110 (27%), Positives = 42/110 (38%)
Query: 26 GYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSAD--DEGQ 83
G+ P T E P S + A L + GG LA + G+ WG + G+
Sbjct: 71 GHQPETKTENIP--SRVKA-LANVKITQAAIGGW--HCLAVDDQGRAYAWGGNEYGQCGE 125
Query: 84 SYLTSGKHGETPEPFPLPTEAS----VVKAAAGWAHCVSVTEAGEVYTWG 129
L +P + V + AAG H V +T G V+TWG
Sbjct: 126 EPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTREGHVWTWG 175
Score = 60 (26.2 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 12/32 (37%), Positives = 19/32 (59%)
Query: 277 QGSVNSSGKA--GRSYVKEIACGGRHSAVVTD 306
+GS N + + G+ K IACGGRH+ + +
Sbjct: 356 EGSFNHTDEEEEGKWSAKSIACGGRHTLAIVE 387
Score = 50 (22.7 bits), Expect = 7.9e-25, Sum P(4) = 7.9e-25
Identities = 12/27 (44%), Positives = 14/27 (51%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSD 229
P V VKIT+ A GG H L + D
Sbjct: 82 PSRVKALANVKITQAAIGGWHCLAVDD 108
Score = 44 (20.5 bits), Expect = 7.9e-25, Sum P(4) = 7.9e-25
Identities = 8/15 (53%), Positives = 11/15 (73%)
Query: 449 RNIACGWWHTLLLAE 463
++IACG HTL + E
Sbjct: 373 KSIACGGRHTLAIVE 387
Score = 42 (19.8 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 7/11 (63%), Positives = 9/11 (81%)
Query: 217 VAAGGRHTLIL 227
+A GGRHTL +
Sbjct: 375 IACGGRHTLAI 385
>RGD|1310971 [details] [associations]
symbol:Herc4 "HECT and RLD domain containing E3 ubiquitin
protein ligase 4" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;IBA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=IBA]
[GO:0005737 "cytoplasm" evidence=IBA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA;ISO;ISS]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=IBA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 UniPathway:UPA00143 RGD:1310971
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829 GO:GO:0005634
GO:GO:0005737 GO:GO:0030154 GO:GO:0007283 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 eggNOG:COG5021 GeneTree:ENSGT00660000095216
HOGENOM:HOG000208452 HOVERGEN:HBG050878 HSSP:Q9UEP9 CTD:26091
KO:K10615 OMA:KLVIQPT OrthoDB:EOG44XJG1 EMBL:BC087104
IPI:IPI00360837 RefSeq:NP_001012074.1 UniGene:Rn.18143
ProteinModelPortal:Q5PQN1 PhosphoSite:Q5PQN1 PRIDE:Q5PQN1
Ensembl:ENSRNOT00000051367 GeneID:309758 KEGG:rno:309758
UCSC:RGD:1310971 InParanoid:Q5PQN1 NextBio:661276
ArrayExpress:Q5PQN1 Genevestigator:Q5PQN1 Uniprot:Q5PQN1
Length = 1057
Score = 273 (101.2 bits), Expect = 9.4e-25, Sum P(2) = 9.4e-25
Identities = 64/175 (36%), Positives = 100/175 (57%)
Query: 294 IACGGRHSAVVTDAGALLTFGWGLY--GQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGL 350
++CG H+ + D G + + WGL GQ G + + +R P SL DIQ+ Q+A G
Sbjct: 89 VSCGEAHTLALNDKGQV--YAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGY 146
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVD-QAENVPKLLETPILESKRAKVVSCGARHSAV 409
+H++ +S V+ +G N++GQLG G++ Q + P+L+++ +L +V + GA HS V
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKS-LLGIPFMQVAAGGA-HSFV 204
Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
LT G + WG NK+GQLGL D DR +P+L+ + I CG HT L +
Sbjct: 205 LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK 259
Score = 254 (94.5 bits), Expect = 2.8e-22, Sum P(3) = 2.8e-22
Identities = 59/170 (34%), Positives = 91/170 (53%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHG-STNDQLRPSYASSLMDIQVEQIAAG 349
+ ++ACG HS ++ A + +G YGQ G G Q P SL+ I Q+AAG
Sbjct: 139 IVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAG 198
Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
H+ +++ G ++ +G N+FGQLG + VP LL++ L S++ + CG H+A
Sbjct: 199 GAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS--LRSQKIVYICCGEDHTAA 256
Query: 410 LTEDGQVLSWGWNKYGQLGLGD-SIDRNIPSLVPIHGFLPRNIACGWWHT 458
LT++G V ++G YGQLG S + N + + G + IACG HT
Sbjct: 257 LTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHT 306
Score = 229 (85.7 bits), Expect = 4.6e-15, Sum P(2) = 4.6e-15
Identities = 56/174 (32%), Positives = 91/174 (52%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
V+++ CG RH+ V D G + T G GQ GH + +P +L + ++ G
Sbjct: 36 VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGE 93
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGT-GVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
HT+ ++ +G+VY +G + GQLG G ++ VP+ +++ L + V+CG HS
Sbjct: 94 AHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKS--LSDIQIVQVACGYYHSLA 151
Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNI-PSLVP-IHGFLPRNIACGWWHTLLL 461
L++ +V WG NKYGQLGLG + P L+ + G +A G H+ +L
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVL 205
Score = 223 (83.6 bits), Expect = 5.2e-15, P = 5.2e-15
Identities = 55/165 (33%), Positives = 89/165 (53%)
Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
+L +G YGQ G G +++ L P + ++ +V + GL HTV + +G VY G
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
N GQLG +++ P+ + L+++ VSCG H+ L + GQV +WG + GQL
Sbjct: 61 NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
GL S + RNI SL I +ACG++H+L L++ +++
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALSKASEV 158
Score = 217 (81.4 bits), Expect = 3.1e-21, Sum P(3) = 3.1e-21
Identities = 55/153 (35%), Positives = 79/153 (51%)
Query: 293 EIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
++A GG HS V+T +GA+ FGWG +GQ G ND+ P+ SL ++ I G
Sbjct: 194 QVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGE 251
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGARH-SA 408
HT ++ EG V+ FG +GQLG E N K+ E L ++CG +H SA
Sbjct: 252 DHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE---LMGSIVTQIACGRQHTSA 308
Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
+ G++ S+G GQLG G + +R P V
Sbjct: 309 FVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 100 (40.3 bits), Expect = 3.1e-21, Sum P(3) = 3.1e-21
Identities = 24/90 (26%), Positives = 47/90 (52%)
Query: 43 PARLCGGDSWKDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFP 99
P ++ D+ +++ CG A LA ++ G++ WG D +GQ L + P
Sbjct: 75 PEQVVALDA-QNIVAVSCGEAHTLALNDKGQVYAWG-LDSDGQLGLQGSEECIRVPRNIK 132
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
++ +V+ A G+ H +++++A EV+ WG
Sbjct: 133 SLSDIQIVQVACGYYHSLALSKASEVFCWG 162
Score = 93 (37.8 bits), Expect = 1.9e-07, Sum P(3) = 1.9e-07
Identities = 21/45 (46%), Positives = 29/45 (64%)
Query: 289 SYVKEIACGGRH-SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
S V +IACG +H SA V +G + +FG G GQ G GST+++ P
Sbjct: 294 SIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
Score = 83 (34.3 bits), Expect = 9.4e-25, Sum P(2) = 9.4e-25
Identities = 24/79 (30%), Positives = 37/79 (46%)
Query: 53 KDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
K V GCG + + G + T G +D GQ L K + PE ++V +
Sbjct: 34 KKVRDVGCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVS 90
Query: 111 AGWAHCVSVTEAGEVYTWG 129
G AH +++ + G+VY WG
Sbjct: 91 CGEAHTLALNDKGQVYAWG 109
Score = 54 (24.1 bits), Expect = 3.1e-21, Sum P(3) = 3.1e-21
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILS 228
SP L+ G+ +VAAGG H+ +L+
Sbjct: 180 SPQLIKSLLGIPFMQVAAGGAHSFVLT 206
Score = 40 (19.1 bits), Expect = 2.9e-20, Sum P(2) = 2.9e-20
Identities = 11/34 (32%), Positives = 14/34 (41%)
Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
DE L P K+ V G RHT+ + D
Sbjct: 18 DEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLD 51
Score = 38 (18.4 bits), Expect = 2.8e-22, Sum P(3) = 2.8e-22
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 212 VKITKVAAGGRHTLILS 228
++I +VA G H+L LS
Sbjct: 137 IQIVQVACGYYHSLALS 153
Score = 38 (18.4 bits), Expect = 4.7e-20, Sum P(2) = 4.7e-20
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 214 ITKVAAGGRHTLILSD 229
I V+ G HTL L+D
Sbjct: 86 IVAVSCGEAHTLALND 101
>FB|FBgn0031107 [details] [associations]
symbol:HERC2 "HECT and RLD domain containing protein 2
ortholog (H. sapiens)" species:7227 "Drosophila melanogaster"
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=NAS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA;NAS] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0020037 "heme binding" evidence=IEA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] Pfam:PF00632 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR009060 InterPro:IPR010606
Pfam:PF00173 Pfam:PF06701 PROSITE:PS50237 PROSITE:PS51416
SMART:SM00119 UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 GO:GO:0005814 GO:GO:0046872
EMBL:AE014298 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 InterPro:IPR015940 PROSITE:PS50030
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939
PROSITE:PS51284 InterPro:IPR000859 SUPFAM:SSF49854 GO:GO:0042787
SUPFAM:SSF46934 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00700000104208 EMBL:AY113293 EMBL:AF189221
RefSeq:NP_608388.2 UniGene:Dm.3302 ProteinModelPortal:Q9VR91
SMR:Q9VR91 IntAct:Q9VR91 STRING:Q9VR91 PaxDb:Q9VR91
EnsemblMetazoa:FBtr0301344 GeneID:33035 KEGG:dme:Dmel_CG11734
UCSC:CG11734-RB CTD:8924 FlyBase:FBgn0031107 InParanoid:Q9VR91
KO:K10595 OMA:QLAFTRD OrthoDB:EOG48GTJ3 PhylomeDB:Q9VR91
GenomeRNAi:33035 NextBio:781623 Bgee:Q9VR91 GermOnline:CG11734
Uniprot:Q9VR91
Length = 4912
Score = 249 (92.7 bits), Expect = 1.4e-24, Sum P(3) = 1.4e-24
Identities = 60/162 (37%), Positives = 90/162 (55%)
Query: 297 GGRHSA-VVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHT 353
GG S VT G L G+G G+ G G ++ P+ SL + V+++A +G H
Sbjct: 4089 GGEQSLFAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHC 4148
Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
+ ++ EG VY +G + G+LG G + + PKL+E L ++CG+ HSA +T
Sbjct: 4149 LALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEH--LNGMSVADIACGSAHSAAITAS 4206
Query: 414 GQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACG 454
G VL+WG +YG+LG GDS D+ P LV + G+ +IACG
Sbjct: 4207 GHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACG 4248
Score = 242 (90.2 bits), Expect = 3.7e-21, Sum P(3) = 3.7e-21
Identities = 60/186 (32%), Positives = 97/186 (52%)
Query: 288 RSYV-KEIAC--GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVE 344
R YV K++A GG+H+ +T G + ++G G G+ GHG+ +P +L ++
Sbjct: 3069 RQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIR 3128
Query: 345 QIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA 404
+A G H+ IS +G +Y +G ++G+LG G + + PKL+ L +R V+CG+
Sbjct: 3129 DVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQLKPKLVTA--LAGRRVVQVACGS 3186
Query: 405 R--HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLL 461
R + LTEDG V SWG +G+LG G S + P + + G I CG +L L
Sbjct: 3187 RDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLAL 3246
Query: 462 AETTQI 467
++
Sbjct: 3247 TRAGEV 3252
Score = 222 (83.2 bits), Expect = 2.3e-21, Sum P(3) = 2.3e-21
Identities = 58/186 (31%), Positives = 91/186 (48%)
Query: 284 GKAGRSYVKEIAC--GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDI 341
G +VK++A GG+H +T G + +G G G+ GHG+ RP L +
Sbjct: 4129 GSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGM 4188
Query: 342 QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVS 401
V IA G H+ I+ G V +G ++G+LG G + + PKL+E L RA ++
Sbjct: 4189 SVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEA--LLGYRAIDIA 4246
Query: 402 CGARHSAVL--TEDGQVLSWGWNKYGQLGLGDSIDRNIP-SLVPIHGFLPRNIACGWWHT 458
CG+ + L T+D V SWG YG+LG G S +P + + G + CG +
Sbjct: 4247 CGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFS 4306
Query: 459 LLLAET 464
+ L ++
Sbjct: 4307 VALTKS 4312
Score = 220 (82.5 bits), Expect = 1.4e-18, Sum P(3) = 1.4e-18
Identities = 58/179 (32%), Positives = 91/179 (50%)
Query: 286 AGRSYVKEIACGGR--HSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQV 343
AGR V ++ACG R + +T+ GA+ ++G G +G+ G G + P L I V
Sbjct: 3175 AGRRVV-QVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGV 3233
Query: 344 EQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI--LESKRAKVVS 401
QI G ++ ++ G V+ +G + +LG G DQ P+ PI L +R V+
Sbjct: 3234 VQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQ----PIGGLRGRRVIHVA 3289
Query: 402 CGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTL 459
GA H +T+ GQV +WG N +GQ G G++ P+LV + +ACG H++
Sbjct: 3290 VGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSI 3348
Score = 199 (75.1 bits), Expect = 8.7e-10, Sum P(3) = 8.7e-10
Identities = 44/132 (33%), Positives = 74/132 (56%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
V+ + CG +SA +T G LLT+G G Y + GHG+++D+ P+ +L D V +A G
Sbjct: 670 VQSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGS 729
Query: 351 W--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
H++ ++ EG V+ +G +G+LG G P L+E+ R + V G++ S
Sbjct: 730 GDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVES----LPRVQRVFAGSQFSV 785
Query: 409 VLTEDGQVLSWG 420
L+ +GQ+ +WG
Sbjct: 786 ALSSEGQLYTWG 797
Score = 197 (74.4 bits), Expect = 1.6e-18, Sum P(3) = 1.6e-18
Identities = 46/126 (36%), Positives = 67/126 (53%)
Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQ 345
AG VK + CG + S +T +GA+ T+G G + + GHGS + RP ++L ++
Sbjct: 4292 AGLGVVK-VECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIIS 4350
Query: 346 IAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGAR 405
IA G H V S G VY +G N GQLG G A P+L+ L+ K V+CG+
Sbjct: 4351 IATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAA--LQGKHIVKVTCGSA 4408
Query: 406 HSAVLT 411
H+ L+
Sbjct: 4409 HTLALS 4414
Score = 197 (74.4 bits), Expect = 1.6e-18, Sum P(3) = 1.6e-18
Identities = 56/179 (31%), Positives = 88/179 (49%)
Query: 293 EIACGG--RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
+IACG + +TD + ++G G YG+ G G ++ P SL + V ++ G
Sbjct: 4244 DIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECGS 4303
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTG-VDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
+V ++ G VY +G F +LG G VD PK + L+ K+ ++ G+ H
Sbjct: 4304 QFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRR-PK--KVAALQGKKIISIATGSLHCVA 4360
Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
++ G+V +WG N GQLG G P LV + G + CG HTL L+ T+Q+
Sbjct: 4361 CSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALS-TSQL 4418
Score = 175 (66.7 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 49/159 (30%), Positives = 81/159 (50%)
Query: 315 WGLYG--QCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
WGL Q G G +++ P+++ ++ ++ IA G +S +G+VY G G
Sbjct: 2991 WGLNDKEQLG-GLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYACGEGTNG 3049
Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSC--GARHSAVLTEDGQVLSWGWNKYGQLGL 429
+LG GV NVP + P+L K V+ G +H+ LT DG+V SWG + G+LG
Sbjct: 3050 RLGLGV--THNVPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGH 3107
Query: 430 GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
G+ + P LV + R++ACG H+ ++ ++
Sbjct: 3108 GNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGEL 3146
Score = 173 (66.0 bits), Expect = 9.4e-12, Sum P(2) = 9.4e-12
Identities = 51/165 (30%), Positives = 79/165 (47%)
Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
+ G HS +T G + +G G YG+ G+G+ N L+P SL +V+++ AG +
Sbjct: 727 LGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLP--RVQRVFAGSQFS 784
Query: 354 VCISVEGRVYVFG-GNQFG-QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLT 411
V +S EG++Y +G G QL Q +VP+L+ + L+ KR V+ H L+
Sbjct: 785 VALSSEGQLYTWGKATCLGHQLVERSVQGCSVPRLVSS--LQHKRIVDVAVSVAHCLALS 842
Query: 412 EDGQVLSWGWNKYGQL---GLGDSIDRNIPSLVPIHGFLPRNIAC 453
G+V WG N Q+ + P LV + F IAC
Sbjct: 843 SSGEVFGWGRNDSQQICPASVSSEPLLRTPILVSLPTFPASGIAC 887
Score = 171 (65.3 bits), Expect = 1.3e-15, Sum P(3) = 1.3e-15
Identities = 45/164 (27%), Positives = 82/164 (50%)
Query: 308 GALLTFGWGLY--GQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYV 364
GA +GWG GQ G G +++ P+ +L ++ Q+A G ++ +G+++
Sbjct: 4047 GASTIYGWGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFA 4105
Query: 365 FGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKY 424
G G+LG G + +P LL + + V+ G +H LT +G+V +WG +
Sbjct: 4106 TGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGED 4165
Query: 425 GQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
G+LG G+ + + P LV ++G +IACG H+ + + +
Sbjct: 4166 GKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHV 4209
Score = 151 (58.2 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 40/147 (27%), Positives = 68/147 (46%)
Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC 355
C GRH + ++G G + GHG T+ + P+ ++L V+ + G ++
Sbjct: 623 CEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAA 682
Query: 356 ISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKV-VSCGARHSAVLTEDG 414
I+ G + +G + +LG G ++P L+ + + V + G HS LT +G
Sbjct: 683 ITCGGNLLTWGRGTYARLGHGNSDDRSLPTLV-VALSDHMVVDVALGSGDAHSLALTSEG 741
Query: 415 QVLSWGWNKYGQLGLGDSIDRNIPSLV 441
V +WG YG+LG G+ P LV
Sbjct: 742 LVFAWGDGDYGKLGNGNCNGSLQPILV 768
Score = 139 (54.0 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 49/180 (27%), Positives = 81/180 (45%)
Query: 288 RSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA 347
R +K++AC +++ G L T W L +++ A + I +
Sbjct: 571 RFQIKQVACCETQMLILSQEGKLYT--WRLAKPEAEPLPMEEV----AHDVF-ISIAGHC 623
Query: 348 AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHS 407
G H + I Y +G + +LG G A VP + LE + V CG +S
Sbjct: 624 EGR-HFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAA--LEQHCVQSVYCGCSYS 680
Query: 408 AVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAETTQ 466
A +T G +L+WG Y +LG G+S DR++P+LV + + ++A G LA T++
Sbjct: 681 AAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSE 740
Score = 123 (48.4 bits), Expect = 1.4e-24, Sum P(3) = 1.4e-24
Identities = 26/72 (36%), Positives = 39/72 (54%)
Query: 60 CG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
CG F+LA + +G++ TWG D + +H P+P V+ A G HC+
Sbjct: 3238 CGAQFSLALTRAGEVWTWGKGDYYRLGH-GGDQHVRKPQPIGGLRGRRVIHVAVGALHCL 3296
Query: 118 SVTEAGEVYTWG 129
+VT+AG+VY WG
Sbjct: 3297 AVTDAGQVYAWG 3308
Score = 106 (42.4 bits), Expect = 2.0e-23, Sum P(3) = 2.0e-23
Identities = 23/72 (31%), Positives = 34/72 (47%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAAGWAHCV 117
G F++A S G+L TWG A G + G P +V A AHC+
Sbjct: 780 GSQFSVALSSEGQLYTWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCL 839
Query: 118 SVTEAGEVYTWG 129
+++ +GEV+ WG
Sbjct: 840 ALSSSGEVFGWG 851
Score = 100 (40.3 bits), Expect = 3.4e-22, Sum P(3) = 3.4e-22
Identities = 31/112 (27%), Positives = 48/112 (42%)
Query: 22 VYMWG---YLPGTSPEKSPILSP-IPARLCGGDSWKDVCGGGCGFALATSESGKLITWGS 77
+Y WG Y + + L P + L G + CG LA +E G + +WG
Sbjct: 3146 LYTWGLGEYGRLGHGDNTTQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGD 3205
Query: 78 ADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
D G+ + +TP + VV+ G +++T AGEV+TWG
Sbjct: 3206 GDF-GKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWG 3256
Score = 92 (37.4 bits), Expect = 5.5e-22, Sum P(3) = 5.5e-22
Identities = 26/89 (29%), Positives = 42/89 (47%)
Query: 54 DVC-GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAG 112
DV G G +LA + G + WG D G+ L +G + +P + + V + AG
Sbjct: 724 DVALGSGDAHSLALTSEGLVFAWGDGD-YGK--LGNGNCNGSLQPILVESLPRVQRVFAG 780
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTR 141
V+++ G++YTWG C+ V R
Sbjct: 781 SQFSVALSSEGQLYTWGKATCLGHQLVER 809
Score = 89 (36.4 bits), Expect = 1.1e-21, Sum P(3) = 1.1e-21
Identities = 26/80 (32%), Positives = 40/80 (50%)
Query: 55 VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT-EASVVK-AAAG 112
V GG ALA + GK+ +WG +D G+ L G +P + A ++ A G
Sbjct: 3078 VHSGG-KHALALTLDGKVFSWGEGED-GK--LGHGNRTTLDKPRLVEALRAKKIRDVACG 3133
Query: 113 WAHCVSVTEAGEVYTWGWRE 132
+H +++ GE+YTWG E
Sbjct: 3134 SSHSAAISSQGELYTWGLGE 3153
Score = 83 (34.3 bits), Expect = 4.6e-21, Sum P(3) = 4.6e-21
Identities = 26/79 (32%), Positives = 39/79 (49%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT------EASVVKAA-- 110
GC ++ A + G L+TWG +Y G HG + + LPT + VV A
Sbjct: 676 GCSYSAAITCGGNLLTWGRG-----TYARLG-HGNSDDR-SLPTLVVALSDHMVVDVALG 728
Query: 111 AGWAHCVSVTEAGEVYTWG 129
+G AH +++T G V+ WG
Sbjct: 729 SGDAHSLALTSEGLVFAWG 747
Score = 81 (33.6 bits), Expect = 3.4e-14, Sum P(2) = 3.4e-14
Identities = 23/75 (30%), Positives = 34/75 (45%)
Query: 55 VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWA 114
V GG LA + G++ WG +D G+ + + P+ SV A G A
Sbjct: 4141 VNSGG-KHCLALTTEGEVYAWGEGED-GKLGHGNRMSYDRPKLVEHLNGMSVADIACGSA 4198
Query: 115 HCVSVTEAGEVYTWG 129
H ++T +G V TWG
Sbjct: 4199 HSAAITASGHVLTWG 4213
Score = 74 (31.1 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 32/117 (27%), Positives = 44/117 (37%)
Query: 20 TVVYMWGY-----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLIT 74
+ +Y WG+ L G E S I +P P + GG A + GKL
Sbjct: 4049 STIYGWGHNHRGQLGGL--EGSRIKTPTPCEALSLLRPVQLAGGEQSL-FAVTPDGKLFA 4105
Query: 75 WGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA--AGWAHCVSVTEAGEVYTWG 129
G G+ + P V K A +G HC+++T GEVY WG
Sbjct: 4106 TGYGSG-GRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWG 4161
Score = 70 (29.7 bits), Expect = 1.0e-19, Sum P(3) = 1.0e-19
Identities = 24/76 (31%), Positives = 34/76 (44%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT-EASVVKAAA---GW 113
GG S+ GK+ G + G+ L G P P LP VVK A G
Sbjct: 3026 GGSKSLFIVSQDGKVYACGEGTN-GR--LGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGG 3082
Query: 114 AHCVSVTEAGEVYTWG 129
H +++T G+V++WG
Sbjct: 3083 KHALALTLDGKVFSWG 3098
Score = 65 (27.9 bits), Expect = 2.1e-18, Sum P(2) = 2.1e-18
Identities = 36/129 (27%), Positives = 57/129 (44%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP-FPLPTEASVV-KAAAGWAHC 116
G LA +++G++ WG +D GQ SG +P + +A V + A G +H
Sbjct: 3291 GALHCLAVTDAGQVYAWGD-NDHGQQ--GSGNTFVNKKPALVIGLDAVFVNRVACGSSHS 3347
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRD-FG--SAGSFQKDS--TGKQSALPTEQAPPSDKR 171
++ R VP + TRD G S G ++ ++ T KQ A P Q+ S+
Sbjct: 3348 IAWGLPNASSDEEKRGPVPFSS-TRDPLGGSSLGIYEAETMQTLKQEAKPLNQSSLSESL 3406
Query: 172 AGEEVVKRR 180
A E R+
Sbjct: 3407 ALETPAARQ 3415
Score = 63 (27.2 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 25/88 (28%), Positives = 42/88 (47%)
Query: 49 GDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPF-PLPTEASV- 106
G S D+ G A T+ SG ++TWG +G+ Y G HG++ + P EA +
Sbjct: 4187 GMSVADIACGSAHSAAITA-SGHVLTWG----KGR-YGRLG-HGDSEDQLRPKLVEALLG 4239
Query: 107 -----VKAAAGWAHCVSVTEAGEVYTWG 129
+ +G A + +T+ V++WG
Sbjct: 4240 YRAIDIACGSGDAQTLCITDDDNVWSWG 4267
Score = 55 (24.4 bits), Expect = 2.0e-23, Sum P(3) = 2.0e-23
Identities = 15/37 (40%), Positives = 20/37 (54%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGR--HTLILSD 229
GD L P LVT G ++ +VA G R TL L++
Sbjct: 3160 GDNTTQLKPKLVTALAGRRVVQVACGSRDAQTLALTE 3196
Score = 52 (23.4 bits), Expect = 4.8e-17, Sum P(2) = 4.8e-17
Identities = 17/69 (24%), Positives = 30/69 (43%)
Query: 62 FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTE 121
+AL+ + + WG + GQ G +TP P + V+ A G +VT
Sbjct: 4041 WALSWGGASTIYGWGH-NHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTP 4099
Query: 122 AGEVYTWGW 130
G+++ G+
Sbjct: 4100 DGKLFATGY 4108
Score = 49 (22.3 bits), Expect = 1.4e-24, Sum P(3) = 1.4e-24
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
SG+ F P LV V + +VA G H++
Sbjct: 3317 SGNTFVNKKPALVIGLDAVFVNRVACGSSHSI 3348
Score = 47 (21.6 bits), Expect = 3.0e-16, Sum P(3) = 3.0e-16
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 99 PLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW--RECV 134
P + +S AA G +++ G+V+ W W R C+
Sbjct: 3891 PATSSSSSSSAAPG-----AISSTGDVHKWAWFKRYCI 3923
Score = 47 (21.6 bits), Expect = 8.7e-10, Sum P(3) = 8.7e-10
Identities = 21/73 (28%), Positives = 28/73 (38%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA-SVVKAAAGWA---HCVSV 119
L S+ GKL TW A E EP P+ A V + AG H +++
Sbjct: 585 LILSQEGKLYTWRLAKPEA-------------EPLPMEEVAHDVFISIAGHCEGRHFLAI 631
Query: 120 TEAGEVYTWGWRE 132
Y+WG E
Sbjct: 632 DSNHNAYSWGTGE 644
Score = 44 (20.5 bits), Expect = 4.6e-17, Sum P(3) = 4.6e-17
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 64 LATSESGKLITWGSADDEG--QSYLTSGKHGETPEPFPLPT 102
LA S SG++ WG D + + ++S TP LPT
Sbjct: 839 LALSSSGEVFGWGRNDSQQICPASVSSEPLLRTPILVSLPT 879
Score = 42 (19.8 bits), Expect = 7.6e-24, Sum P(3) = 7.6e-24
Identities = 8/21 (38%), Positives = 10/21 (47%)
Query: 128 WGWRECVPSAKVTRDFGSAGS 148
WGWR V + G +GS
Sbjct: 3746 WGWRFWVHAIMPAATLGESGS 3766
Score = 42 (19.8 bits), Expect = 2.8e-09, Sum P(3) = 2.8e-09
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 257 HLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY--VKEIAC 296
HLI E S PLL +G ++ G G+ Y +++ C
Sbjct: 104 HLIQDCE-LVSSPTAPLLNARGQLSYLGDDGKHYCGAQQLKC 144
Score = 41 (19.5 bits), Expect = 5.5e-22, Sum P(3) = 5.5e-22
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 253 VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGK 285
VP PH +P L R +V++ +V+S GK
Sbjct: 3059 VPLPHQLPVL--------RQYVVKKVAVHSGGK 3083
Score = 38 (18.4 bits), Expect = 1.1e-21, Sum P(3) = 1.1e-21
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 212 VKITKVAAGGRHTLILS 228
VK V +GG+H L L+
Sbjct: 3073 VKKVAVHSGGKHALALT 3089
Score = 37 (18.1 bits), Expect = 6.0e-17, Sum P(4) = 6.0e-17
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 212 VKITKVAAGGRHTLILS 228
VK V +GG+H L L+
Sbjct: 4136 VKKVAVNSGGKHCLALT 4152
Score = 37 (18.1 bits), Expect = 8.7e-10, Sum P(3) = 8.7e-10
Identities = 13/36 (36%), Positives = 16/36 (44%)
Query: 416 VLSWGWNKYGQLG--LGDSI-----DRNIPSLVPIH 444
V+ WG N QLG G + + I L PIH
Sbjct: 2988 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIH 3023
>TAIR|locus:504956339 [details] [associations]
symbol:RUG1 "AT5G08710" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
EMBL:BT005498 EMBL:AK118882 IPI:IPI00533904 RefSeq:NP_680156.2
UniGene:At.45869 ProteinModelPortal:Q8GWF2 SMR:Q8GWF2 PRIDE:Q8GWF2
EnsemblPlants:AT5G08710.1 GeneID:830771 KEGG:ath:AT5G08710
TAIR:At5g08710 HOGENOM:HOG000006005 InParanoid:Q8GWF2 OMA:HSACIDE
PhylomeDB:Q8GWF2 ProtClustDB:CLSN2690903 Genevestigator:Q8GWF2
Uniprot:Q8GWF2
Length = 434
Score = 244 (91.0 bits), Expect = 2.1e-24, Sum P(2) = 2.1e-24
Identities = 58/187 (31%), Positives = 92/187 (49%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGS---------TNDQLRPSYASSLMDI 341
++ +A G HS VTD G +L++G G G+ GHG +N + P L I
Sbjct: 190 IQSVALGSEHSVAVTDGGEVLSWGGGGSGRLGHGHQSSLFGILRSNSEFTPRLIKELEGI 249
Query: 342 QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL-ETPILESKRAKVV 400
+V +AAGL H+ C G ++FG ++G G + P ++ E P E V
Sbjct: 250 KVTNVAAGLLHSACTDENGSAFMFGEKSINKMGFGGVRNATTPSIISEVPYAEE-----V 304
Query: 401 SCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHG-FLPRNIA---CGWW 456
+CG H+ V+T G++ +WG N+ G LG + + P V + G FL ++ CGW
Sbjct: 305 ACGGYHTCVVTRGGELYTWGSNENGCLGTDSTYVSHSP--VRVEGPFLESTVSQVSCGWK 362
Query: 457 HTLLLAE 463
HT +++
Sbjct: 363 HTAAISD 369
Score = 219 (82.2 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 68/209 (32%), Positives = 104/209 (49%)
Query: 266 ASGKDR-PLLVRQGSVNSSGKAGRSYVKEIA-CGGRHSAVVTDAGALLTFGWGL--YGQC 321
A G+ R P+ QGS +SG S + I C R V +++G WG YG+
Sbjct: 5 AIGRVRIPVSRIQGSNCTSGLLKDSKLGPIGVCCSRW--VSSESGKRFAAMWGSGDYGRL 62
Query: 322 GHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE 381
G G+ + Q P+ S+L D + +A G HT+ ++ RV+ G N GQLG D
Sbjct: 63 GLGNLDSQWTPAVCSALSDHSITAVACGGAHTLFLTETRRVFATGLNDCGQLGVS-DVKS 121
Query: 382 NVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR--NIPS 439
+ LE L+ K +S G HSA +T DG++ WG N GQLGLG R +P+
Sbjct: 122 HAMDPLEVSGLD-KDILHISAGYYHSAAITVDGELYMWGKNSSGQLGLGKKAARVVRVPT 180
Query: 440 LVP-IHGFLPRNIACGWWHTLLLAETTQI 467
V +HG +++A G H++ + + ++
Sbjct: 181 KVEALHGITIQSVALGSEHSVAVTDGGEV 209
Score = 217 (81.4 bits), Expect = 4.4e-21, Sum P(2) = 4.4e-21
Identities = 60/187 (32%), Positives = 92/187 (49%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
V +A G HSA + G+ FG + G G + PS S + E++A G
Sbjct: 251 VTNVAAGLLHSACTDENGSAFMFGEKSINKMGFGGVRNATTPSIISEVP--YAEEVACGG 308
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
+HT ++ G +Y +G N+ G LGT + P +E P LES ++V SCG +H+A +
Sbjct: 309 YHTCVVTRGGELYTWGSNENGCLGTDSTYVSHSPVRVEGPFLESTVSQV-SCGWKHTAAI 367
Query: 411 TEDGQVLSWGW------------NKYGQLGLGDSIDRNIPSLVPIHGFLPR--NIACGWW 456
+ D V +WGW + GQLG G +D P++V + G R +I+CG+
Sbjct: 368 S-DNNVFTWGWGGSHGTFSVDGHSSGGQLGHGSDVDYARPAMVDL-GKNVRAVHISCGFN 425
Query: 457 HTLLLAE 463
HT + E
Sbjct: 426 HTAAVLE 432
Score = 206 (77.6 bits), Expect = 5.7e-15, Sum P(2) = 5.7e-15
Identities = 54/178 (30%), Positives = 83/178 (46%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
+ +ACGG H+ +T+ + G GQ G S +D + I+AG
Sbjct: 84 ITAVACGGAHTLFLTETRRVFATGLNDCGQLGVSDVKSHAMDPLEVSGLDKDILHISAGY 143
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
+H+ I+V+G +Y++G N GQLG G A V + L + V+ G+ HS +
Sbjct: 144 YHSAAITVDGELYMWGKNSSGQLGLGKKAARVVRVPTKVEALHGITIQSVALGSEHSVAV 203
Query: 411 TEDGQVLSWGWNKYGQLGLGDS-----IDRN----IPSLVP-IHGFLPRNIACGWWHT 458
T+ G+VLSWG G+LG G I R+ P L+ + G N+A G H+
Sbjct: 204 TDGGEVLSWGGGGSGRLGHGHQSSLFGILRSNSEFTPRLIKELEGIKVTNVAAGLLHS 261
Score = 139 (54.0 bits), Expect = 9.1e-14, Sum P(3) = 9.1e-14
Identities = 45/136 (33%), Positives = 66/136 (48%)
Query: 290 YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVEQIAA 348
Y +E+ACGG H+ VVT G L T+G G G ST P ++ V Q++
Sbjct: 300 YAEEVACGGYHTCVVTRGGELYTWGSNENGCLGTDSTYVSHSPVRVEGPFLESTVSQVSC 359
Query: 349 GLWHTVCISVEGRVYVFG--GNQ--F--------GQLGTGVDQAENVPKLLETPILESKR 396
G HT IS + V+ +G G+ F GQLG G D P +++ + ++ R
Sbjct: 360 GWKHTAAIS-DNNVFTWGWGGSHGTFSVDGHSSGGQLGHGSDVDYARPAMVD--LGKNVR 416
Query: 397 AKVVSCGARHSAVLTE 412
A +SCG H+A + E
Sbjct: 417 AVHISCGFNHTAAVLE 432
Score = 104 (41.7 bits), Expect = 8.9e-10, Sum P(3) = 8.9e-10
Identities = 30/106 (28%), Positives = 47/106 (44%)
Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWG----LY 318
E+ G D V V G S V +++CG +H+A ++D + T+GWG +
Sbjct: 327 ENGCLGTDSTY-VSHSPVRVEGPFLESTVSQVSCGWKHTAAISDNN-VFTWGWGGSHGTF 384
Query: 319 --------GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCI 356
GQ GHGS D RP+ +++ I+ G HT +
Sbjct: 385 SVDGHSSGGQLGHGSDVDYARPAMVDLGKNVRAVHISCGFNHTAAV 430
Score = 97 (39.2 bits), Expect = 2.1e-24, Sum P(2) = 2.1e-24
Identities = 34/106 (32%), Positives = 48/106 (45%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLT 87
G S KS + P+ + G D KD+ G+ + A + G+L WG + GQ L
Sbjct: 115 GVSDVKSHAMDPL--EVSGLD--KDILHISAGYYHSAAITVDGELYMWGK-NSSGQ--LG 167
Query: 88 SGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSVTEAGEVYTWG 129
GK P EA ++ A G H V+VT+ GEV +WG
Sbjct: 168 LGKKAARVVRVPTKVEALHGITIQSVALGSEHSVAVTDGGEVLSWG 213
Score = 82 (33.9 bits), Expect = 7.7e-23, Sum P(2) = 7.7e-23
Identities = 25/78 (32%), Positives = 35/78 (44%)
Query: 58 GGCGFALATSESGKLIT--WGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAH 115
G C +SESGK WGS D G+ L + TP ++ S+ A G AH
Sbjct: 35 GVCCSRWVSSESGKRFAAMWGSGD-YGRLGLGNLDSQWTPAVCSALSDHSITAVACGGAH 93
Query: 116 CVSVTEAGEVYTWGWREC 133
+ +TE V+ G +C
Sbjct: 94 TLFLTETRRVFATGLNDC 111
Score = 55 (24.4 bits), Expect = 9.1e-14, Sum P(3) = 9.1e-14
Identities = 23/88 (26%), Positives = 34/88 (38%)
Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMXXXXXXXXXXXXXXXXXSRIKMV 253
S EF +P L+ G+K+T VAAG H+ +D ++
Sbjct: 234 SNSEF---TPRLIKELEGIKVTNVAAGLLHSAC-TDENGSAFMFGEKSINKMGFGGVRNA 289
Query: 254 PTPHLI---PCLEHAASGKDRPLLVRQG 278
TP +I P E A G +V +G
Sbjct: 290 TTPSIISEVPYAEEVACGGYHTCVVTRG 317
Score = 51 (23.0 bits), Expect = 1.3e-19, Sum P(2) = 1.3e-19
Identities = 10/16 (62%), Positives = 12/16 (75%)
Query: 214 ITKVAAGGRHTLILSD 229
IT VA GG HTL L++
Sbjct: 84 ITAVACGGAHTLFLTE 99
>UNIPROTKB|Q5GLZ8 [details] [associations]
symbol:HERC4 "Probable E3 ubiquitin-protein ligase HERC4"
species:9606 "Homo sapiens" [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0007283
"spermatogenesis" evidence=ISS] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 UniPathway:UPA00143
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829 GO:GO:0005634
GO:GO:0005737 GO:GO:0030154 GO:GO:0007283 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 eggNOG:COG5021 HOGENOM:HOG000208452
HOVERGEN:HBG050878 EMBL:AY221963 EMBL:AY650032 EMBL:AY650033
EMBL:AY650034 EMBL:AB046813 EMBL:AL356741 EMBL:AC024258
EMBL:AL133551 EMBL:BC039600 IPI:IPI00333067 IPI:IPI00552050
IPI:IPI00604497 IPI:IPI00827523 IPI:IPI00827948 IPI:IPI00827992
RefSeq:NP_056416.2 RefSeq:NP_071362.1 UniGene:Hs.51891 HSSP:Q9UEP9
ProteinModelPortal:Q5GLZ8 SMR:Q5GLZ8 IntAct:Q5GLZ8 STRING:Q5GLZ8
PhosphoSite:Q5GLZ8 DMDM:74707832 PaxDb:Q5GLZ8 PRIDE:Q5GLZ8
DNASU:26091 Ensembl:ENST00000277817 Ensembl:ENST00000373700
Ensembl:ENST00000395187 Ensembl:ENST00000395198
Ensembl:ENST00000412272 Ensembl:ENST00000473533
Ensembl:ENST00000492996 GeneID:26091 KEGG:hsa:26091 UCSC:uc001jng.4
UCSC:uc001jnh.4 UCSC:uc001jnk.3 UCSC:uc009xpr.3 CTD:26091
GeneCards:GC10M069681 HGNC:HGNC:24521 HPA:HPA045453 MIM:609248
neXtProt:NX_Q5GLZ8 PharmGKB:PA134949021 InParanoid:Q5GLZ8 KO:K10615
ChiTaRS:HERC4 GenomeRNAi:26091 NextBio:48027 ArrayExpress:Q5GLZ8
Bgee:Q5GLZ8 CleanEx:HS_HERC4 Genevestigator:Q5GLZ8 Uniprot:Q5GLZ8
Length = 1057
Score = 271 (100.5 bits), Expect = 2.1e-24, Sum P(2) = 2.1e-24
Identities = 65/175 (37%), Positives = 99/175 (56%)
Query: 294 IACGGRHSAVVTDAGALLTFGWGLY--GQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGL 350
++CG H+ + D G + + WGL GQ G + + +R P SL DIQ+ Q+A G
Sbjct: 89 VSCGEAHTLALNDKGQV--YAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGY 146
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVD-QAENVPKLLETPILESKRAKVVSCGARHSAV 409
+H++ +S V+ +G N++GQLG G D + + P+LL++ +L +V + GA HS V
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKS-LLGIPFMQVAAGGA-HSFV 204
Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
LT G + WG NK+GQLGL D DR +P+L+ + I CG HT L +
Sbjct: 205 LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK 259
Score = 255 (94.8 bits), Expect = 1.8e-22, Sum P(2) = 1.8e-22
Identities = 59/170 (34%), Positives = 92/170 (54%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST-NDQLRPSYASSLMDIQVEQIAAG 349
+ ++ACG HS ++ A + +G YGQ G G+ Q P SL+ I Q+AAG
Sbjct: 139 IVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAG 198
Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
H+ +++ G ++ +G N+FGQLG + VP LL++ L S++ + CG H+A
Sbjct: 199 GAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS--LRSQKIVYICCGEDHTAA 256
Query: 410 LTEDGQVLSWGWNKYGQLGLGD-SIDRNIPSLVPIHGFLPRNIACGWWHT 458
LT++G V ++G YGQLG S + N + + G + IACG HT
Sbjct: 257 LTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHT 306
Score = 231 (86.4 bits), Expect = 6.7e-16, P = 6.7e-16
Identities = 57/174 (32%), Positives = 92/174 (52%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
V+++ CG RH+ V D G + T G GQ GH + +P +L + ++ G
Sbjct: 36 VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGE 93
Query: 351 WHTVCISVEGRVYVFGGNQFGQLG-TGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
HT+ ++ +G+VY +G + GQLG G ++ VP+ +++ L + V+CG HS
Sbjct: 94 AHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKS--LSDIQIVQVACGYYHSLA 151
Query: 410 LTEDGQVLSWGWNKYGQLGLG-DSIDRNIPSLVP-IHGFLPRNIACGWWHTLLL 461
L++ +V WG NKYGQLGLG D + P L+ + G +A G H+ +L
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVL 205
Score = 220 (82.5 bits), Expect = 1.8e-21, Sum P(3) = 1.8e-21
Identities = 58/165 (35%), Positives = 84/165 (50%)
Query: 293 EIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
++A GG HS V+T +GA+ FGWG +GQ G ND+ P+ SL ++ I G
Sbjct: 194 QVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGE 251
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGARH-SA 408
HT ++ EG V+ FG +GQLG E N K+ E L ++CG +H SA
Sbjct: 252 DHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE---LMGSIVTEIACGRQHTSA 308
Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIAC 453
+ G++ S+G GQLG G + +R P V + + P N C
Sbjct: 309 FVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWY-PYNGQC 352
Score = 218 (81.8 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 54/165 (32%), Positives = 89/165 (53%)
Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
+L +G +GQ G G +++ L P + ++ +V + GL HTV + +G VY G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
N GQLG +++ P+ + L+++ VSCG H+ L + GQV +WG + GQL
Sbjct: 61 NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
GL S + RNI SL I +ACG++H+L L++ +++
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALSKASEV 158
Score = 101 (40.6 bits), Expect = 1.8e-21, Sum P(3) = 1.8e-21
Identities = 24/90 (26%), Positives = 47/90 (52%)
Query: 43 PARLCGGDSWKDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFP 99
P ++ D+ +++ CG A LA ++ G++ WG D +GQ L + P
Sbjct: 75 PEQVVALDA-QNIVAVSCGEAHTLALNDKGQVYAWG-LDSDGQLGLVGSEECIRVPRNIK 132
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
++ +V+ A G+ H +++++A EV+ WG
Sbjct: 133 SLSDIQIVQVACGYYHSLALSKASEVFCWG 162
Score = 96 (38.9 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
Identities = 22/45 (48%), Positives = 29/45 (64%)
Query: 289 SYVKEIACGGRH-SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
S V EIACG +H SA V +G + +FG G GQ G GST+++ P
Sbjct: 294 SIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
Score = 82 (33.9 bits), Expect = 2.1e-24, Sum P(2) = 2.1e-24
Identities = 22/73 (30%), Positives = 35/73 (47%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWG 129
+++ + G+VY WG
Sbjct: 97 LALNDKGQVYAWG 109
Score = 79 (32.9 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 22/73 (30%), Positives = 37/73 (50%)
Query: 60 CGF--ALATSESGKLITWGSADDEGQSYL-TSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
CG+ +LA S++ ++ WG + GQ L T K +P+ ++ AAG AH
Sbjct: 144 CGYYHSLALSKASEVFCWGQ-NKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHS 202
Query: 117 VSVTEAGEVYTWG 129
+T +G ++ WG
Sbjct: 203 FVLTLSGAIFGWG 215
Score = 52 (23.4 bits), Expect = 1.8e-21, Sum P(3) = 1.8e-21
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILS 228
SP L+ G+ +VAAGG H+ +L+
Sbjct: 180 SPQLLKSLLGIPFMQVAAGGAHSFVLT 206
Score = 42 (19.8 bits), Expect = 9.8e-05, Sum P(3) = 9.8e-05
Identities = 19/80 (23%), Positives = 31/80 (38%)
Query: 212 VKITKVAAGGRHTLILSDMXXXXXXXXXXXXXXXXXSRIKMVPTPHL------IPCLEHA 265
++I +VA G H+L LS + K +P L IP ++ A
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196
Query: 266 ASGKDRPLLVRQGSVNSSGK 285
A G +L G++ G+
Sbjct: 197 AGGAHSFVLTLSGAIFGWGR 216
Score = 38 (18.4 bits), Expect = 8.3e-20, Sum P(2) = 8.3e-20
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 214 ITKVAAGGRHTLILSD 229
I V+ G HTL L+D
Sbjct: 86 IVAVSCGEAHTLALND 101
>RGD|1309901 [details] [associations]
symbol:Rccd1 "RCC1 domain containing 1" species:10116 "Rattus
norvegicus" [GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0005886
"plasma membrane" evidence=IEA;ISO] RGD:1309901 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 CTD:91433
OrthoDB:EOG41NTMF GeneTree:ENSGT00700000104312 IPI:IPI00391295
RefSeq:XP_218819.5 UniGene:Rn.225183 Ensembl:ENSRNOT00000029471
GeneID:308760 KEGG:rno:308760 UCSC:RGD:1309901 NextBio:659480
Uniprot:D3ZG92
Length = 378
Score = 190 (71.9 bits), Expect = 2.4e-24, Sum P(2) = 2.4e-24
Identities = 31/83 (37%), Positives = 55/83 (66%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
V+++ G H+ ++ +AG + ++G G +GQ GHGS +L P +L +++ ++AAG
Sbjct: 163 VRQLQLGAEHALLLCEAGQVFSWGGGRHGQLGHGSLEAELEPRLLEALQGLRMAEVAAGG 222
Query: 351 WHTVCISVEGRVYVFGGNQFGQL 373
WH+VC+S G +Y++G N+ GQL
Sbjct: 223 WHSVCVSETGDIYIWGWNESGQL 245
Score = 174 (66.3 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 37/100 (37%), Positives = 57/100 (57%)
Query: 331 RPSYASSLM-DIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
+P + L +++V Q+ G H + + G+V+ +GG + GQLG G +AE P+LLE
Sbjct: 150 QPPFCQPLAPELRVRQLQLGAEHALLLCEAGQVFSWGGGRHGQLGHGSLEAELEPRLLEA 209
Query: 390 PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
L+ R V+ G HS ++E G + WGWN+ GQL L
Sbjct: 210 --LQGLRMAEVAAGGWHSVCVSETGDIYIWGWNESGQLAL 247
Score = 156 (60.0 bits), Expect = 2.4e-24, Sum P(2) = 2.4e-24
Identities = 36/82 (43%), Positives = 48/82 (58%)
Query: 384 PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP- 442
P LL+ P L S K SCG+RH+AV+T G++ +WGW KYGQLG DS + P V
Sbjct: 293 PALLDLP-LGSDAVKA-SCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSSDQPCRVEY 350
Query: 443 -IHGFLP-RNIACGWWHTLLLA 462
+ L R + CG W+T + A
Sbjct: 351 FVERQLEVRAVTCGPWNTYVYA 372
Score = 140 (54.3 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 30/75 (40%), Positives = 41/75 (54%)
Query: 287 GRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVE-- 344
G VK +CG RH+AVVT G L T+GWG YGQ GH + +P ++ Q+E
Sbjct: 301 GSDAVKA-SCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSSDQPCRVEYFVERQLEVR 359
Query: 345 QIAAGLWHTVCISVE 359
+ G W+T +VE
Sbjct: 360 AVTCGPWNTYVYAVE 374
Score = 137 (53.3 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 29/80 (36%), Positives = 46/80 (57%)
Query: 390 PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI-PSLVP-IHGFL 447
P+ R + + GA H+ +L E GQV SWG ++GQLG G S++ + P L+ + G
Sbjct: 156 PLAPELRVRQLQLGAEHALLLCEAGQVFSWGGGRHGQLGHG-SLEAELEPRLLEALQGLR 214
Query: 448 PRNIACGWWHTLLLAETTQI 467
+A G WH++ ++ET I
Sbjct: 215 MAEVAAGGWHSVCVSETGDI 234
Score = 109 (43.4 bits), Expect = 2.0e-15, Sum P(2) = 2.0e-15
Identities = 36/115 (31%), Positives = 51/115 (44%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA---AAGWAH 115
G AL E+G++ +WG GQ L G EP L + A A GW H
Sbjct: 169 GAEHALLLCEAGQVFSWGGGR-HGQ--LGHGSLEAELEPRLLEALQGLRMAEVAAGGW-H 224
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTG-KQSALPTEQAPPSD 169
V V+E G++Y WGW E A TR + ++++T L E+A +D
Sbjct: 225 SVCVSETGDIYIWGWNESGQLALPTRSGTEKKTVREEATELNDDGLRGEEAALAD 279
Score = 88 (36.0 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 59/250 (23%), Positives = 95/250 (38%)
Query: 88 SGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRD-FGSA 146
+G+H P PL V + +A W++ VT G V G C +A RD + S
Sbjct: 25 NGQHA-VHSPEPLHAADDVCQVSASWSYTALVTRGGRVELSGSVSC--AADGCRDVWASE 81
Query: 147 GSF--QKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESEN-PASGDEFFTLS- 202
G Q++ +G + L + P GE + + S A+ + E+ P S TL
Sbjct: 82 GLLVVQRNKSGSGTEL--QAWVPGSALQGEPLWVQNLASGAKAQGEDEPGSEPRMGTLPL 139
Query: 203 -PCL---VT--------LNPGVKITKVAAGGRHTLILSDMXXXXXXXXXXXXXXXXXSRI 250
PC +T L P +++ ++ G H L+L + S +
Sbjct: 140 LPCARAYMTPQPPFCQPLAPELRVRQLQLGAEHALLLCEAGQVFSWGGGRHGQLGHGS-L 198
Query: 251 KMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGAL 310
+ P L+ L+ G +R E+A GG HS V++ G +
Sbjct: 199 EAELEPRLLEALQ----G------LRMA--------------EVAAGGWHSVCVSETGDI 234
Query: 311 LTFGWGLYGQ 320
+GW GQ
Sbjct: 235 YIWGWNESGQ 244
Score = 72 (30.4 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 15/57 (26%), Positives = 28/57 (49%)
Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCG 403
+ G HT ++ G +Y +G ++GQLG + + P +E + + V+CG
Sbjct: 308 SCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSSDQPCRVEYFVERQLEVRAVTCG 364
>UNIPROTKB|F1N7C1 [details] [associations]
symbol:HERC6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
OMA:HIFAGTY EMBL:DAAA02017014 IPI:IPI00825680 UniGene:Bt.42179
Ensembl:ENSBTAT00000027362 NextBio:20874614 Uniprot:F1N7C1
Length = 1016
Score = 250 (93.1 bits), Expect = 3.2e-24, Sum P(2) = 3.2e-24
Identities = 65/177 (36%), Positives = 94/177 (53%)
Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST-NDQLRPSYASSLMDIQVEQIAAGLW 351
++ACG HS +++ G + ++G +GQ G G Q P SL I + Q+AAG
Sbjct: 132 QVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGH 191
Query: 352 HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVS--CGARHSAV 409
H+ +S+ G + +G N GQL + A V + I K VVS CG +H+AV
Sbjct: 192 HSFALSLSGTSFGWGSNSAGQLALSGNNAP-VQRYKPVSIGALKTLGVVSISCGYKHTAV 250
Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETT 465
LT+DG+V ++G N YGQLG + ++ P LV I G + + I CG HTL TT
Sbjct: 251 LTQDGKVFTFGDNSYGQLGHDPTAEKRGPQLVERIEGLVSQ-IDCGSDHTLAYIYTT 306
Score = 227 (85.0 bits), Expect = 1.8e-15, P = 1.8e-15
Identities = 64/199 (32%), Positives = 95/199 (47%)
Query: 267 SGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST 326
+G RPL RQ AG + + + A G HS ++ G + + G GQ G T
Sbjct: 7 AGGRRPLRERQVC------AGGNTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGT 60
Query: 327 NDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG-VDQAENVPK 385
+P +L + V ++ G H++ + +GRV+ +G GQLG G + +PK
Sbjct: 61 PRGEQPERIPALETLNVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPK 120
Query: 386 LLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI-PSLV-PI 443
++T L + V+CG HS L+EDGQV SWG N +GQLGLG P V +
Sbjct: 121 KIKT--LAGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSL 178
Query: 444 HGFLPRNIACGWWHTLLLA 462
G +A G H+ L+
Sbjct: 179 EGIPLAQVAAGGHHSFALS 197
Score = 207 (77.9 bits), Expect = 3.0e-16, Sum P(2) = 3.0e-16
Identities = 55/180 (30%), Positives = 91/180 (50%)
Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQ-LRPSYASSLMDIQVEQIAAGLWH 352
++CG HS V G + +G GQ G G + P +L I++ Q+A G +H
Sbjct: 80 VSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYH 139
Query: 353 TVCISVEGRVYVFGGNQFGQLGTGVD-QAENVPKLLETPILESKRAKVVSCGARHSAVLT 411
+V +S +G+V+ +G N GQLG G + ++ P+ + + LE V+ G HS L+
Sbjct: 140 SVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRS--LEGIPLAQVAAGGHHSFALS 197
Query: 412 EDGQVLSWGWNKYGQLGL-GDS--IDRNIP-SLVPIHGFLPRNIACGWWHTLLLAETTQI 467
G WG N GQL L G++ + R P S+ + +I+CG+ HT +L + ++
Sbjct: 198 LSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKV 257
Score = 173 (66.0 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 42/126 (33%), Positives = 66/126 (52%)
Query: 345 QIAAGLWHTVCISVEGRVYVFGGNQFGQLGT-GVDQAENVPKLLETPILESKRAKVVSCG 403
Q A+G H++ + +G V G N GQLG G + E ++ P LE+ +VSCG
Sbjct: 27 QAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERI---PALETLNVALVSCG 83
Query: 404 ARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRN-IPSLVP-IHGFLPRNIACGWWHTLLL 461
HS + G+V +WG GQLG+G+ + IP + + G +ACG +H++ L
Sbjct: 84 KEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVAL 143
Query: 462 AETTQI 467
+E Q+
Sbjct: 144 SEDGQV 149
Score = 129 (50.5 bits), Expect = 4.7e-12, Sum P(3) = 4.7e-12
Identities = 37/103 (35%), Positives = 51/103 (49%)
Query: 265 AASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHG 324
A SG + P V++ S G V I+CG +H+AV+T G + TFG YGQ GH
Sbjct: 214 ALSGNNAP--VQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHD 271
Query: 325 STNDQLRPSYASSLMDIQVEQIAAGLWHTVC-ISVEGRVYVFG 366
T ++ P + + V QI G HT+ I G+V FG
Sbjct: 272 PTAEKRGPQLVERIEGL-VSQIDCGSDHTLAYIYTTGQVVSFG 313
Score = 104 (41.7 bits), Expect = 3.2e-24, Sum P(2) = 3.2e-24
Identities = 33/103 (32%), Positives = 50/103 (48%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
G PE+ P L + L CG +LA G++ WG+A EGQ L G
Sbjct: 63 GEQPERIPALETLNVALVS-------CGKE--HSLAVCHKGRVFAWGAAS-EGQ--LGIG 110
Query: 90 KHGETPE-PFPLPTEASV--VKAAAGWAHCVSVTEAGEVYTWG 129
+ ET P + T A + ++ A G H V+++E G+V++WG
Sbjct: 111 EFKETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSWG 153
Score = 75 (31.5 bits), Expect = 3.7e-22, Sum P(3) = 3.7e-22
Identities = 26/85 (30%), Positives = 34/85 (40%)
Query: 53 KDVCGGGCGFALATS-ESGKLI-----TWGSADDEGQSYL-TSGK-HGETPEPFPLPTEA 104
+ VC GG A S E L+ T S D + L G GE PE P
Sbjct: 16 RQVCAGGNTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETL 75
Query: 105 SVVKAAAGWAHCVSVTEAGEVYTWG 129
+V + G H ++V G V+ WG
Sbjct: 76 NVALVSCGKEHSLAVCHKGRVFAWG 100
Score = 66 (28.3 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 21/75 (28%), Positives = 37/75 (49%)
Query: 60 CGF--ALATSESGKLITWGSADDEGQSYLTSGKH---GETPEPFPLPTEASVVKAAAGWA 114
CG ++A SE G++ +WG+ + GQ L GK +P+ + + AAG
Sbjct: 135 CGHYHSVALSEDGQVFSWGT-NSHGQ--LGLGKEFPSQASPQRVRSLEGIPLAQVAAGGH 191
Query: 115 HCVSVTEAGEVYTWG 129
H +++ +G + WG
Sbjct: 192 HSFALSLSGTSFGWG 206
Score = 62 (26.9 bits), Expect = 3.9e-05, Sum P(3) = 3.9e-05
Identities = 20/66 (30%), Positives = 33/66 (50%)
Query: 291 VKEIACGGRHS-AVVTDAGALLTFGWG--LYGQCGH-GSTNDQLRPSY-ASSLMDIQVEQ 345
V +I CG H+ A + G +++FG G + H G+ + + A L D+QV+
Sbjct: 289 VSQIDCGSDHTLAYIYTTGQVVSFGRGPGCASRSPHPGAESSDISCLVSAKDLADVQVKH 348
Query: 346 IAAGLW 351
I AG +
Sbjct: 349 IFAGTY 354
Score = 57 (25.1 bits), Expect = 4.7e-12, Sum P(3) = 4.7e-12
Identities = 15/35 (42%), Positives = 20/35 (57%)
Query: 195 GDEFFT-LSPCLVTLNPGVKITKVAAGGRHTLILS 228
G EF + SP V G+ + +VAAGG H+ LS
Sbjct: 163 GKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALS 197
Score = 49 (22.3 bits), Expect = 3.7e-22, Sum P(3) = 3.7e-22
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
T P + G+KI +VA G H++ LS+
Sbjct: 116 TFIPKKIKTLAGIKIIQVACGHYHSVALSE 145
>UNIPROTKB|F1NCH3 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
OMA:KLVIQPT EMBL:AADN02028016 IPI:IPI00586918
Ensembl:ENSGALT00000006135 ArrayExpress:F1NCH3 Uniprot:F1NCH3
Length = 1048
Score = 271 (100.5 bits), Expect = 3.4e-24, Sum P(2) = 3.4e-24
Identities = 61/173 (35%), Positives = 99/173 (57%)
Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWH 352
++CG H+ + D G + +G GQ G T + +R P SL +IQ+ Q+A G +H
Sbjct: 89 VSCGEAHTLALNDKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYH 148
Query: 353 TVCISVEGRVYVFGGNQFGQLGTGVD-QAENVPKLLETPILESKRAKVVSCGARHSAVLT 411
++ +S V+ +G N++GQLG G + + +N P ++++ +L A++ + GA HS VLT
Sbjct: 149 SLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKS-LLGIPFAQIAAGGA-HSFVLT 206
Query: 412 EDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
G + WG NK+GQLGL D DR +P+L+ + +I CG HT L +
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTK 259
Score = 247 (92.0 bits), Expect = 2.5e-21, Sum P(2) = 2.5e-21
Identities = 59/170 (34%), Positives = 90/170 (52%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHG-STNDQLRPSYASSLMDIQVEQIAAG 349
+ ++ACG HS ++ + ++G YGQ G G Q P SL+ I QIAAG
Sbjct: 139 IVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAG 198
Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
H+ +++ G ++ +G N+FGQLG D VP LL++ L +++ + CG H+A
Sbjct: 199 GAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKS--LRTQKVVHICCGEDHTAA 256
Query: 410 LTEDGQVLSWGWNKYGQLGLGD-SIDRNIPSLVPIHGFLPRNIACGWWHT 458
LT++G V ++G YGQLG S + N + + G L I CG HT
Sbjct: 257 LTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSLVTQITCGRQHT 306
Score = 240 (89.5 bits), Expect = 5.0e-16, Sum P(2) = 5.0e-16
Identities = 58/174 (33%), Positives = 92/174 (52%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
++++ CG RH+ V D G + T G GQ GH RP + +L + ++ G
Sbjct: 36 IRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKARK--RPEHVGALDAQNIVAVSCGE 93
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGT-GVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
HT+ ++ +G+VY +G GQLG G ++ VP+ +++ L + V+CG HS
Sbjct: 94 AHTLALNDKGQVYAWGLATDGQLGLPGTEECIRVPRNIKS--LSEIQIVQVACGYYHSLA 151
Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDR-NIPSLVP-IHGFLPRNIACGWWHTLLL 461
L++ +V SWG NKYGQLGLG + N P ++ + G IA G H+ +L
Sbjct: 152 LSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVL 205
Score = 222 (83.2 bits), Expect = 2.6e-21, Sum P(3) = 2.6e-21
Identities = 59/165 (35%), Positives = 84/165 (50%)
Query: 293 EIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
+IA GG HS V+T +GA+ FGWG +GQ G ND+ P+ SL +V I G
Sbjct: 194 QIAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGE 251
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGARHS-A 408
HT ++ EG V+ FG +GQLG E N K+ E L ++CG +H+ A
Sbjct: 252 DHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE---LMGSLVTQITCGRQHTTA 308
Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIAC 453
+ G++ S+G GQLG G + +R P V +LP + C
Sbjct: 309 FVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVK-GNWLPYSTQC 352
Score = 210 (79.0 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 53/165 (32%), Positives = 87/165 (52%)
Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
+L +G +GQ G G +++ L P + ++ ++ + GL HTV + +G VY G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
N GQLG ++A P+ L+++ VSCG H+ L + GQV +WG GQL
Sbjct: 61 NDLGQLGH--EKARKRPE--HVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQL 116
Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
GL + + RNI SL I +ACG++H+L L++ +++
Sbjct: 117 GLPGTEECIRVPRNIKSLSEIQIV---QVACGYYHSLALSKGSEV 158
Score = 181 (68.8 bits), Expect = 1.4e-16, Sum P(3) = 1.4e-16
Identities = 40/95 (42%), Positives = 48/95 (50%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
V I CG H+A +T G + TFG G YGQ GH ST+ ++ P LM V QI G
Sbjct: 244 VVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSLVTQITCGR 303
Query: 351 WHTVC-ISVEGRVYVFGGNQFGQLGTGVDQAENVP 384
HT + GR+Y FG GQLGTG P
Sbjct: 304 QHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSP 338
Score = 98 (39.6 bits), Expect = 2.6e-21, Sum P(3) = 2.6e-21
Identities = 23/80 (28%), Positives = 42/80 (52%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKA 109
+++ CG A LA ++ G++ WG A D GQ L + P +E +V+
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWGLATD-GQLGLPGTEECIRVPRNIKSLSEIQIVQV 142
Query: 110 AAGWAHCVSVTEAGEVYTWG 129
A G+ H +++++ EV++WG
Sbjct: 143 ACGYYHSLALSKGSEVFSWG 162
Score = 83 (34.3 bits), Expect = 6.1e-06, Sum P(3) = 6.1e-06
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 289 SYVKEIACGGRHS-AVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
S V +I CG +H+ A V +G + +FG G GQ G G+T+++ P
Sbjct: 294 SLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSP 338
Score = 80 (33.2 bits), Expect = 3.4e-24, Sum P(2) = 3.4e-24
Identities = 22/73 (30%), Positives = 35/73 (47%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKARKRPEHVGALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWG 129
+++ + G+VY WG
Sbjct: 97 LALNDKGQVYAWG 109
Score = 71 (30.1 bits), Expect = 7.0e-13, Sum P(2) = 7.0e-13
Identities = 21/73 (28%), Positives = 34/73 (46%)
Query: 60 CGF--ALATSESGKLITWGSADDEGQSYLT-SGKHGETPEPFPLPTEASVVKAAAGWAHC 116
CG+ +LA S+ ++ +WG + GQ L K +P + AAG AH
Sbjct: 144 CGYYHSLALSKGSEVFSWGQ-NKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHS 202
Query: 117 VSVTEAGEVYTWG 129
+T +G ++ WG
Sbjct: 203 FVLTLSGAIFGWG 215
Score = 51 (23.0 bits), Expect = 2.6e-21, Sum P(3) = 2.6e-21
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILS 228
SP ++ G+ ++AAGG H+ +L+
Sbjct: 180 SPHVIKSLLGIPFAQIAAGGAHSFVLT 206
Score = 42 (19.8 bits), Expect = 7.9e-14, Sum P(3) = 7.9e-14
Identities = 19/80 (23%), Positives = 30/80 (37%)
Query: 212 VKITKVAAGGRHTLILSDMXXXXXXXXXXXXXXXXXSRIKMVPTPHLI------PCLEHA 265
++I +VA G H+L LS K +PH+I P + A
Sbjct: 137 IQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIA 196
Query: 266 ASGKDRPLLVRQGSVNSSGK 285
A G +L G++ G+
Sbjct: 197 AGGAHSFVLTLSGAIFGWGR 216
Score = 38 (18.4 bits), Expect = 8.1e-20, Sum P(2) = 8.1e-20
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 214 ITKVAAGGRHTLILSD 229
I V+ G HTL L+D
Sbjct: 86 IVAVSCGEAHTLALND 101
Score = 37 (18.1 bits), Expect = 1.0e-19, Sum P(2) = 1.0e-19
Identities = 11/34 (32%), Positives = 14/34 (41%)
Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
DE L P +I V G RHT+ + D
Sbjct: 18 DEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLD 51
>UNIPROTKB|E2RFW5 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:26091 KO:K10615 EMBL:AAEX03002773
GeneID:479225 KEGG:cfa:479225 RefSeq:XP_536367.2
Ensembl:ENSCAFT00000021404 Uniprot:E2RFW5
Length = 1049
Score = 267 (99.0 bits), Expect = 5.1e-24, Sum P(2) = 5.1e-24
Identities = 64/175 (36%), Positives = 100/175 (57%)
Query: 294 IACGGRHSAVVTDAGALLTFGWGLY--GQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGL 350
++CG H+ + D G + + WGL GQ G + + +R P SL DIQ+ Q+A G
Sbjct: 89 VSCGEAHTLALNDKGQV--YAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGY 146
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVD-QAENVPKLLETPILESKRAKVVSCGARHSAV 409
+H++ +S V+ +G N++GQLG G+D + + P+L+++ +L +V + GA HS V
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKS-LLGIPFMQVAAGGA-HSFV 204
Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
LT G + WG NK+GQLGL D DR +P+L+ + I CG HT L +
Sbjct: 205 LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTK 259
Score = 251 (93.4 bits), Expect = 4.2e-22, Sum P(2) = 4.2e-22
Identities = 58/170 (34%), Positives = 91/170 (53%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHG-STNDQLRPSYASSLMDIQVEQIAAG 349
+ ++ACG HS ++ A + +G YGQ G G Q P SL+ I Q+AAG
Sbjct: 139 IVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAG 198
Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
H+ +++ G ++ +G N+FGQLG + VP LL++ L +++ + CG H+A
Sbjct: 199 GAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS--LRTQKIVYICCGEDHTAA 256
Query: 410 LTEDGQVLSWGWNKYGQLGLGD-SIDRNIPSLVPIHGFLPRNIACGWWHT 458
LT++G V ++G YGQLG S + N + + G + IACG HT
Sbjct: 257 LTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHT 306
Score = 230 (86.0 bits), Expect = 4.4e-15, Sum P(2) = 4.4e-15
Identities = 57/174 (32%), Positives = 92/174 (52%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
V+++ CG RH+ V D G + T G GQ GH + +P +L + ++ G
Sbjct: 36 VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGE 93
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGT-GVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
HT+ ++ +G+VY +G + GQLG G ++ VP+ +++ L + V+CG HS
Sbjct: 94 AHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKS--LSDIQIVQVACGYYHSLA 151
Query: 410 LTEDGQVLSWGWNKYGQLGLG-DSIDRNIPSLVP-IHGFLPRNIACGWWHTLLL 461
L++ +V WG NKYGQLGLG D + P L+ + G +A G H+ +L
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVL 205
Score = 222 (83.2 bits), Expect = 6.4e-22, Sum P(3) = 6.4e-22
Identities = 59/165 (35%), Positives = 84/165 (50%)
Query: 293 EIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
++A GG HS V+T +GA+ FGWG +GQ G ND+ P+ SL ++ I G
Sbjct: 194 QVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGE 251
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGARH-SA 408
HT ++ EG V+ FG +GQLG E N K+ E L ++CG +H SA
Sbjct: 252 DHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE---LMGSIVTQIACGRQHTSA 308
Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIAC 453
+ G++ S+G GQLG G + +R P V + F P N C
Sbjct: 309 FVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWF-PYNGQC 352
Score = 217 (81.4 bits), Expect = 2.4e-14, P = 2.4e-14
Identities = 54/165 (32%), Positives = 89/165 (53%)
Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
+L +G +GQ G G +++ L P + ++ +V + GL HTV + +G VY G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
N GQLG +++ P+ + L+++ VSCG H+ L + GQV +WG + GQL
Sbjct: 61 NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
GL S + RNI SL I +ACG++H+L L++ +++
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALSKASEV 158
Score = 101 (40.6 bits), Expect = 6.4e-22, Sum P(3) = 6.4e-22
Identities = 25/90 (27%), Positives = 48/90 (53%)
Query: 43 PARLCGGDSWKDVCGGGCGFA--LATSESGKLITWGSADDEGQ-SYLTSGKHGETPEPFP 99
P ++ D+ +++ CG A LA ++ G++ WG D +GQ L S + P
Sbjct: 75 PEQVVALDA-QNIVAVSCGEAHTLALNDKGQVYAWG-LDSDGQLGLLGSEECIRVPRNIK 132
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
++ +V+ A G+ H +++++A EV+ WG
Sbjct: 133 SLSDIQIVQVACGYYHSLALSKASEVFCWG 162
Score = 93 (37.8 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 21/45 (46%), Positives = 29/45 (64%)
Query: 289 SYVKEIACGGRH-SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
S V +IACG +H SA V +G + +FG G GQ G GST+++ P
Sbjct: 294 SIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
Score = 83 (34.3 bits), Expect = 5.1e-24, Sum P(2) = 5.1e-24
Identities = 24/79 (30%), Positives = 37/79 (46%)
Query: 53 KDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
K V GCG + + G + T G +D GQ L K + PE ++V +
Sbjct: 34 KKVRDVGCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVS 90
Query: 111 AGWAHCVSVTEAGEVYTWG 129
G AH +++ + G+VY WG
Sbjct: 91 CGEAHTLALNDKGQVYAWG 109
Score = 54 (24.1 bits), Expect = 6.4e-22, Sum P(3) = 6.4e-22
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILS 228
SP L+ G+ +VAAGG H+ +L+
Sbjct: 180 SPQLIKSLLGIPFMQVAAGGAHSFVLT 206
Score = 39 (18.8 bits), Expect = 2.0e-19, Sum P(2) = 2.0e-19
Identities = 11/34 (32%), Positives = 14/34 (41%)
Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
DE L P K+ V G RHT+ + D
Sbjct: 18 DEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD 51
Score = 39 (18.8 bits), Expect = 0.00031, Sum P(3) = 0.00031
Identities = 19/80 (23%), Positives = 30/80 (37%)
Query: 212 VKITKVAAGGRHTLILSDMXXXXXXXXXXXXXXXXXSRIKMVPTPHLI------PCLEHA 265
++I +VA G H+L LS K +P LI P ++ A
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVA 196
Query: 266 ASGKDRPLLVRQGSVNSSGK 285
A G +L G++ G+
Sbjct: 197 AGGAHSFVLTLSGAIFGWGR 216
Score = 38 (18.4 bits), Expect = 2.5e-19, Sum P(2) = 2.5e-19
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 214 ITKVAAGGRHTLILSD 229
I V+ G HTL L+D
Sbjct: 86 IVAVSCGEAHTLALND 101
>UNIPROTKB|E2RFV1 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:26091 KO:K10615 OMA:KLVIQPT
EMBL:AAEX03002773 RefSeq:XP_849808.1 Ensembl:ENSCAFT00000021413
GeneID:479225 KEGG:cfa:479225 NextBio:20854436 Uniprot:E2RFV1
Length = 1057
Score = 267 (99.0 bits), Expect = 5.2e-24, Sum P(2) = 5.2e-24
Identities = 64/175 (36%), Positives = 100/175 (57%)
Query: 294 IACGGRHSAVVTDAGALLTFGWGLY--GQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGL 350
++CG H+ + D G + + WGL GQ G + + +R P SL DIQ+ Q+A G
Sbjct: 89 VSCGEAHTLALNDKGQV--YAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGY 146
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVD-QAENVPKLLETPILESKRAKVVSCGARHSAV 409
+H++ +S V+ +G N++GQLG G+D + + P+L+++ +L +V + GA HS V
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKS-LLGIPFMQVAAGGA-HSFV 204
Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
LT G + WG NK+GQLGL D DR +P+L+ + I CG HT L +
Sbjct: 205 LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTK 259
Score = 251 (93.4 bits), Expect = 4.2e-22, Sum P(2) = 4.2e-22
Identities = 58/170 (34%), Positives = 91/170 (53%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHG-STNDQLRPSYASSLMDIQVEQIAAG 349
+ ++ACG HS ++ A + +G YGQ G G Q P SL+ I Q+AAG
Sbjct: 139 IVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAG 198
Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
H+ +++ G ++ +G N+FGQLG + VP LL++ L +++ + CG H+A
Sbjct: 199 GAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS--LRTQKIVYICCGEDHTAA 256
Query: 410 LTEDGQVLSWGWNKYGQLGLGD-SIDRNIPSLVPIHGFLPRNIACGWWHT 458
LT++G V ++G YGQLG S + N + + G + IACG HT
Sbjct: 257 LTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHT 306
Score = 230 (86.0 bits), Expect = 4.5e-15, Sum P(2) = 4.5e-15
Identities = 57/174 (32%), Positives = 92/174 (52%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
V+++ CG RH+ V D G + T G GQ GH + +P +L + ++ G
Sbjct: 36 VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGE 93
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGT-GVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
HT+ ++ +G+VY +G + GQLG G ++ VP+ +++ L + V+CG HS
Sbjct: 94 AHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKS--LSDIQIVQVACGYYHSLA 151
Query: 410 LTEDGQVLSWGWNKYGQLGLG-DSIDRNIPSLVP-IHGFLPRNIACGWWHTLLL 461
L++ +V WG NKYGQLGLG D + P L+ + G +A G H+ +L
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVL 205
Score = 222 (83.2 bits), Expect = 6.6e-22, Sum P(3) = 6.6e-22
Identities = 59/165 (35%), Positives = 84/165 (50%)
Query: 293 EIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
++A GG HS V+T +GA+ FGWG +GQ G ND+ P+ SL ++ I G
Sbjct: 194 QVAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGE 251
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGARH-SA 408
HT ++ EG V+ FG +GQLG E N K+ E L ++CG +H SA
Sbjct: 252 DHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE---LMGSIVTQIACGRQHTSA 308
Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIAC 453
+ G++ S+G GQLG G + +R P V + F P N C
Sbjct: 309 FVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWF-PYNGQC 352
Score = 217 (81.4 bits), Expect = 2.4e-14, P = 2.4e-14
Identities = 54/165 (32%), Positives = 89/165 (53%)
Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
+L +G +GQ G G +++ L P + ++ +V + GL HTV + +G VY G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
N GQLG +++ P+ + L+++ VSCG H+ L + GQV +WG + GQL
Sbjct: 61 NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
GL S + RNI SL I +ACG++H+L L++ +++
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALSKASEV 158
Score = 101 (40.6 bits), Expect = 6.6e-22, Sum P(3) = 6.6e-22
Identities = 25/90 (27%), Positives = 48/90 (53%)
Query: 43 PARLCGGDSWKDVCGGGCGFA--LATSESGKLITWGSADDEGQ-SYLTSGKHGETPEPFP 99
P ++ D+ +++ CG A LA ++ G++ WG D +GQ L S + P
Sbjct: 75 PEQVVALDA-QNIVAVSCGEAHTLALNDKGQVYAWG-LDSDGQLGLLGSEECIRVPRNIK 132
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
++ +V+ A G+ H +++++A EV+ WG
Sbjct: 133 SLSDIQIVQVACGYYHSLALSKASEVFCWG 162
Score = 93 (37.8 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 21/45 (46%), Positives = 29/45 (64%)
Query: 289 SYVKEIACGGRH-SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
S V +IACG +H SA V +G + +FG G GQ G GST+++ P
Sbjct: 294 SIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
Score = 83 (34.3 bits), Expect = 5.2e-24, Sum P(2) = 5.2e-24
Identities = 24/79 (30%), Positives = 37/79 (46%)
Query: 53 KDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
K V GCG + + G + T G +D GQ L K + PE ++V +
Sbjct: 34 KKVRDVGCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVS 90
Query: 111 AGWAHCVSVTEAGEVYTWG 129
G AH +++ + G+VY WG
Sbjct: 91 CGEAHTLALNDKGQVYAWG 109
Score = 54 (24.1 bits), Expect = 6.6e-22, Sum P(3) = 6.6e-22
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILS 228
SP L+ G+ +VAAGG H+ +L+
Sbjct: 180 SPQLIKSLLGIPFMQVAAGGAHSFVLT 206
Score = 39 (18.8 bits), Expect = 2.0e-19, Sum P(2) = 2.0e-19
Identities = 11/34 (32%), Positives = 14/34 (41%)
Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
DE L P K+ V G RHT+ + D
Sbjct: 18 DEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD 51
Score = 39 (18.8 bits), Expect = 0.00032, Sum P(3) = 0.00032
Identities = 19/80 (23%), Positives = 30/80 (37%)
Query: 212 VKITKVAAGGRHTLILSDMXXXXXXXXXXXXXXXXXSRIKMVPTPHLI------PCLEHA 265
++I +VA G H+L LS K +P LI P ++ A
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVA 196
Query: 266 ASGKDRPLLVRQGSVNSSGK 285
A G +L G++ G+
Sbjct: 197 AGGAHSFVLTLSGAIFGWGR 216
Score = 38 (18.4 bits), Expect = 2.6e-19, Sum P(2) = 2.6e-19
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 214 ITKVAAGGRHTLILSD 229
I V+ G HTL L+D
Sbjct: 86 IVAVSCGEAHTLALND 101
>UNIPROTKB|E1BAV2 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007283 "spermatogenesis" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0007283 GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:26091 KO:K10615 OMA:KLVIQPT
EMBL:DAAA02061808 EMBL:DAAA02061809 EMBL:DAAA02061810
IPI:IPI00839181 RefSeq:NP_001070362.2 UniGene:Bt.15687
Ensembl:ENSBTAT00000018639 GeneID:533336 KEGG:bta:533336
NextBio:20876005 ArrayExpress:E1BAV2 Uniprot:E1BAV2
Length = 1057
Score = 266 (98.7 bits), Expect = 6.9e-24, Sum P(2) = 6.9e-24
Identities = 63/175 (36%), Positives = 100/175 (57%)
Query: 294 IACGGRHSAVVTDAGALLTFGWGLY--GQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGL 350
++CG H+ + D G + + WGL GQ G + + +R P SL DIQ+ Q+A G
Sbjct: 89 VSCGEAHTLALNDKGQV--YAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGY 146
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVD-QAENVPKLLETPILESKRAKVVSCGARHSAV 409
+H++ +S V+ +G N++GQLG G+D + + P+L+++ +L ++ + GA HS V
Sbjct: 147 YHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKS-LLGIPFMQIAAGGA-HSFV 204
Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
LT G + WG NK+GQLGL D DR +P+L+ + I CG HT L +
Sbjct: 205 LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTK 259
Score = 252 (93.8 bits), Expect = 3.3e-22, Sum P(2) = 3.3e-22
Identities = 59/170 (34%), Positives = 91/170 (53%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHG-STNDQLRPSYASSLMDIQVEQIAAG 349
+ ++ACG HS ++ A + +G YGQ G G Q P SL+ I QIAAG
Sbjct: 139 IVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAG 198
Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
H+ +++ G ++ +G N+FGQLG + VP LL++ L +++ + CG H+A
Sbjct: 199 GAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS--LRTQKIVYICCGEDHTAA 256
Query: 410 LTEDGQVLSWGWNKYGQLGLGD-SIDRNIPSLVPIHGFLPRNIACGWWHT 458
LT++G V ++G YGQLG S + N + + G + IACG HT
Sbjct: 257 LTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHT 306
Score = 231 (86.4 bits), Expect = 3.4e-15, Sum P(2) = 3.4e-15
Identities = 58/174 (33%), Positives = 92/174 (52%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
V+++ CG RH+ V D G + T G GQ GH + +P +L + ++ G
Sbjct: 36 VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGE 93
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGT-GVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
HT+ ++ +G+VY +G + GQLG G ++ VP+ +++ L + V+CG HS
Sbjct: 94 AHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKS--LSDIQIVQVACGYYHSLA 151
Query: 410 LTEDGQVLSWGWNKYGQLGLG-DSIDRNIPSLVP-IHGFLPRNIACGWWHTLLL 461
L++ +V WG NKYGQLGLG D + P L+ + G IA G H+ +L
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVL 205
Score = 223 (83.6 bits), Expect = 6.2e-22, Sum P(3) = 6.2e-22
Identities = 60/165 (36%), Positives = 84/165 (50%)
Query: 293 EIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
+IA GG HS V+T +GA+ FGWG +GQ G ND+ P+ SL ++ I G
Sbjct: 194 QIAAGGAHSFVLTLSGAI--FGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGE 251
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGARH-SA 408
HT ++ EG V+ FG +GQLG E N K+ E L ++CG +H SA
Sbjct: 252 DHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE---LMGSIVTQIACGRQHTSA 308
Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIAC 453
+ G++ S+G GQLG G + +R P V + F P N C
Sbjct: 309 FVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWF-PYNGQC 352
Score = 217 (81.4 bits), Expect = 2.4e-14, P = 2.4e-14
Identities = 54/165 (32%), Positives = 89/165 (53%)
Query: 310 LLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
+L +G +GQ G G +++ L P + ++ +V + GL HTV + +G VY G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
N GQLG +++ P+ + L+++ VSCG H+ L + GQV +WG + GQL
Sbjct: 61 NDLGQLGH--EKSRKKPE--QVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 428 GLGDS-----IDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
GL S + RNI SL I +ACG++H+L L++ +++
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIV---QVACGYYHSLALSKASEV 158
Score = 101 (40.6 bits), Expect = 6.2e-22, Sum P(3) = 6.2e-22
Identities = 25/90 (27%), Positives = 48/90 (53%)
Query: 43 PARLCGGDSWKDVCGGGCGFA--LATSESGKLITWGSADDEGQ-SYLTSGKHGETPEPFP 99
P ++ D+ +++ CG A LA ++ G++ WG D +GQ L S + P
Sbjct: 75 PEQVVALDA-QNIVAVSCGEAHTLALNDKGQVYAWG-LDSDGQLGLLGSEECIRVPRNIK 132
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
++ +V+ A G+ H +++++A EV+ WG
Sbjct: 133 SLSDIQIVQVACGYYHSLALSKASEVFCWG 162
Score = 93 (37.8 bits), Expect = 1.9e-07, Sum P(3) = 1.9e-07
Identities = 21/45 (46%), Positives = 29/45 (64%)
Query: 289 SYVKEIACGGRH-SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
S V +IACG +H SA V +G + +FG G GQ G GST+++ P
Sbjct: 294 SIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
Score = 83 (34.3 bits), Expect = 6.9e-24, Sum P(2) = 6.9e-24
Identities = 24/79 (30%), Positives = 37/79 (46%)
Query: 53 KDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
K V GCG + + G + T G +D GQ L K + PE ++V +
Sbjct: 34 KKVRDVGCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVS 90
Query: 111 AGWAHCVSVTEAGEVYTWG 129
G AH +++ + G+VY WG
Sbjct: 91 CGEAHTLALNDKGQVYAWG 109
Score = 53 (23.7 bits), Expect = 6.2e-22, Sum P(3) = 6.2e-22
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILS 228
SP L+ G+ ++AAGG H+ +L+
Sbjct: 180 SPQLIKSLLGIPFMQIAAGGAHSFVLT 206
Score = 39 (18.8 bits), Expect = 2.7e-19, Sum P(2) = 2.7e-19
Identities = 11/34 (32%), Positives = 14/34 (41%)
Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
DE L P K+ V G RHT+ + D
Sbjct: 18 DEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD 51
Score = 39 (18.8 bits), Expect = 0.00032, Sum P(3) = 0.00032
Identities = 19/80 (23%), Positives = 30/80 (37%)
Query: 212 VKITKVAAGGRHTLILSDMXXXXXXXXXXXXXXXXXSRIKMVPTPHLI------PCLEHA 265
++I +VA G H+L LS K +P LI P ++ A
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIA 196
Query: 266 ASGKDRPLLVRQGSVNSSGK 285
A G +L G++ G+
Sbjct: 197 AGGAHSFVLTLSGAIFGWGR 216
Score = 38 (18.4 bits), Expect = 3.4e-19, Sum P(2) = 3.4e-19
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 214 ITKVAAGGRHTLILSD 229
I V+ G HTL L+D
Sbjct: 86 IVAVSCGEAHTLALND 101
>UNIPROTKB|J9NWD8 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR017986 InterPro:IPR000569
InterPro:IPR001680 InterPro:IPR003877 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00622 PROSITE:PS50082 PROSITE:PS50237
PROSITE:PS50294 SMART:SM00119 SMART:SM00320 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016567 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449
PROSITE:PS50188 SUPFAM:SSF56204 GeneTree:ENSGT00700000104312
EMBL:AAEX03016202 Ensembl:ENSCAFT00000042764 Uniprot:J9NWD8
Length = 4118
Score = 291 (107.5 bits), Expect = 8.5e-24, Sum P(2) = 8.5e-24
Identities = 66/179 (36%), Positives = 106/179 (59%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
V +++CG +HSAVVT G L TFG G YG+ G G+T+++ P ++L Q+ Q+A GL
Sbjct: 3393 VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGL 3452
Query: 351 WHTVCISVEGR-VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
HT+ +S +G V+ FG +G+LG G A++ P+ ++ +L K V+CG + S
Sbjct: 3453 NHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVD--VLCGIGIKKVACGTQFSVA 3510
Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI-HGFLPRNIACGWWHTLLLAETTQI 467
LT+DG V ++G ++ L G + + N P +P+ G + ++A G HTL LA T +
Sbjct: 3511 LTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDV 3569
Score = 249 (92.7 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 52/172 (30%), Positives = 99/172 (57%)
Query: 295 ACGGR-HSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
+CG HS +T++G + ++G G YG+ GHG+++ Q RP +L +V Q++ G H+
Sbjct: 3344 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 3403
Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
++ +G+++ FG +G+LG G + +P+ + LE + V+CG H+ ++ D
Sbjct: 3404 AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA--LEGYQIGQVACGLNHTLAVSAD 3461
Query: 414 GQVL-SWGWNKYGQLGLGDSIDRNIPSLVPIH-GFLPRNIACGWWHTLLLAE 463
G ++ ++G YG+LGLG+S ++ P V + G + +ACG ++ L +
Sbjct: 3462 GSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTK 3513
Score = 249 (92.7 bits), Expect = 3.6e-16, Sum P(2) = 3.6e-16
Identities = 54/178 (30%), Positives = 98/178 (55%)
Query: 289 SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
S +++ CG + V+ G +L G G YG+ G G+++D + S+L V Q+
Sbjct: 3284 SQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVT 3343
Query: 349 GLW---HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGAR 405
H++ ++ G V+ +G +G+LG G + P+ +E L+ + +SCG +
Sbjct: 3344 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA--LQGEEVVQMSCGFK 3401
Query: 406 HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLA 462
HSAV+T DG++ ++G YG+LGLG++ ++ +P V + G+ +ACG HTL ++
Sbjct: 3402 HSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVS 3459
Score = 171 (65.3 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 49/157 (31%), Positives = 73/157 (46%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
+K++ACG + S +T G + TFG G + RP L + +E +A G
Sbjct: 3498 IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGA 3557
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
HT+ ++ G VY +G N GQLG G P L+ +L+ K + +S G HSA
Sbjct: 3558 EHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVT--VLQGKNIRQISAGRCHSAAW 3615
Query: 411 TEDG-QVLSWGWNKYGQLGLGDSIDRNIPSL--VPIH 444
T + G + QLGL D++ +L V IH
Sbjct: 3616 TAPPVPPRAPGVSVPLQLGLPDAVPPQYGALREVSIH 3652
Score = 112 (44.5 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 34/121 (28%), Positives = 62/121 (51%)
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
WH + + VY++G + GQL + NV P +A+ V CG + V+
Sbjct: 3248 WH---LGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFS--QAQQVICGQNCTFVI 3299
Query: 411 TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNI--ACGW-WHTLLLAETTQ 466
+G VL+ G YG+LG G+S D ++ +++ + GF+ + +CG H++ L E+ +
Sbjct: 3300 QANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGE 3359
Query: 467 I 467
+
Sbjct: 3360 V 3360
Score = 89 (36.4 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 22/74 (29%), Positives = 38/74 (51%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAH 115
CG G ++A +ESG++ +WG D + S + + L E VV+ + G+ H
Sbjct: 3345 CGSD-GHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGE-EVVQMSCGFKH 3402
Query: 116 CVSVTEAGEVYTWG 129
VT G+++T+G
Sbjct: 3403 SAVVTSDGKLFTFG 3416
Score = 72 (30.4 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 16/37 (43%), Positives = 22/37 (59%)
Query: 319 GQCGHG-STNDQLRPSYASSLMDIQVEQIAAGLWHTV 354
GQCG G ST +P S L I ++QI+AG H++
Sbjct: 2 GQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSL 38
Score = 68 (29.0 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 24/81 (29%), Positives = 41/81 (50%)
Query: 53 KDVCGGGCGF---ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA 109
++V CGF A+ TS+ GKL T+G+ D G+ L + + + PE + +
Sbjct: 3391 EEVVQMSCGFKHSAVVTSD-GKLFTFGNGD-YGRLGLGNTSNKKLPERVTALEGYQIGQV 3448
Query: 110 AAGWAHCVSVTEAGE-VYTWG 129
A G H ++V+ G V+ +G
Sbjct: 3449 ACGLNHTLAVSADGSMVWAFG 3469
Score = 66 (28.3 bits), Expect = 8.5e-24, Sum P(2) = 8.5e-24
Identities = 24/97 (24%), Positives = 41/97 (42%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
P +P S +CG + + G A G+L G++DD + S G
Sbjct: 3277 PAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRL-GQGNSDDLHVLTVISALQG 3335
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
F + +V + H +++TE+GEV++WG
Sbjct: 3336 -----FVV---TQLVTSCGSDGHSMALTESGEVFSWG 3364
Score = 42 (19.8 bits), Expect = 2.7e-21, Sum P(2) = 2.7e-21
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 158 SALPTEQA--PPSDK---RAGEEVVKRRKTSSAREESENPAS 194
+ LPT +A PP +EV +R+ +S +S PA+
Sbjct: 1956 TVLPTRRAQTPPISSLPTSPSDEVGRRQSLTSPDSQSARPAN 1997
Score = 37 (18.1 bits), Expect = 9.1e-21, Sum P(2) = 9.1e-21
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 174 EEVVKRRKTSSAREESEN 191
E+ +K +K EE EN
Sbjct: 1317 EQEIKSQKQGELEEEDEN 1334
Score = 37 (18.1 bits), Expect = 9.1e-21, Sum P(2) = 9.1e-21
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 175 EVVKRRKTSSAREESENPASGD 196
E+++ R +S R SEN S D
Sbjct: 621 ELIQTRSSSRDRWISENQDSAD 642
>UNIPROTKB|Q9UII4 [details] [associations]
symbol:HERC5 "E3 ISG15--protein ligase HERC5" species:9606
"Homo sapiens" [GO:0051607 "defense response to virus"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0005737
"cytoplasm" evidence=IBA] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IBA] [GO:0032020 "ISG15-protein conjugation" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042296 "ISG15
ligase activity" evidence=IDA] [GO:0050688 "regulation of defense
response to virus" evidence=IDA] [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0019221
"cytokine-mediated signaling pathway" evidence=TAS] [GO:0032480
"negative regulation of type I interferon production" evidence=TAS]
[GO:0045087 "innate immune response" evidence=TAS] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 EMBL:AY337518
EMBL:AB027289 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829
GO:GO:0005634 GO:GO:0048471 Reactome:REACT_6900 GO:GO:0000079
GO:GO:0045087 GO:GO:0019221 GO:GO:0051607 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
GO:GO:0032480 GO:GO:0050688 SUPFAM:SSF56204 eggNOG:COG5021
HOGENOM:HOG000208452 HOVERGEN:HBG050878 EMBL:AC083829 EMBL:BC140716
IPI:IPI00008821 RefSeq:NP_057407.2 UniGene:Hs.26663
ProteinModelPortal:Q9UII4 SMR:Q9UII4 DIP:DIP-44200N IntAct:Q9UII4
STRING:Q9UII4 PhosphoSite:Q9UII4 DMDM:296434523 PaxDb:Q9UII4
PRIDE:Q9UII4 Ensembl:ENST00000264350 GeneID:51191 KEGG:hsa:51191
UCSC:uc003hrt.3 CTD:51191 GeneCards:GC04P089378 H-InvDB:HIX0200636
HGNC:HGNC:24368 HPA:HPA043929 MIM:608242 neXtProt:NX_Q9UII4
PharmGKB:PA134973940 InParanoid:Q9UII4 OMA:KDWITNT
OrthoDB:EOG4N30N6 PhylomeDB:Q9UII4 GenomeRNAi:51191 NextBio:54182
ArrayExpress:Q9UII4 Bgee:Q9UII4 CleanEx:HS_HERC5
Genevestigator:Q9UII4 GermOnline:ENSG00000138646 GO:GO:0042296
GO:GO:0032020 Uniprot:Q9UII4
Length = 1024
Score = 293 (108.2 bits), Expect = 1.3e-23, Sum P(2) = 1.3e-23
Identities = 62/169 (36%), Positives = 98/169 (57%)
Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST-NDQLRPSYASSLMDIQVEQIAAGLW 351
+I CG HS ++ G L +G L+GQ G G P L + + QI+AG
Sbjct: 142 QITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEA 201
Query: 352 HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLT 411
H++ +S+ G +Y +G N+ GQLG G ++++ P L+E L++++ + V+CG HSA+LT
Sbjct: 202 HSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEG--LDNQKVEFVACGGSHSALLT 259
Query: 412 EDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTL 459
+DG + ++G K+GQLG + + P LV + G+ IACG WHTL
Sbjct: 260 QDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTL 308
Score = 239 (89.2 bits), Expect = 7.1e-22, Sum P(2) = 7.1e-22
Identities = 65/182 (35%), Positives = 95/182 (52%)
Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQC 321
L H S KD P L+ +G N V+ +ACGG HSA++T G L TFG G +GQ
Sbjct: 225 LGHTES-KDDPSLI-EGLDNQK-------VEFVACGGSHSALLTQDGLLFTFGAGKHGQL 275
Query: 322 GHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC-ISVEGRVYVFGGNQFGQLGTGVDQA 380
GH ST ++LRP + L+ +V QIA G WHT+ +S G+V+ FG + GQLG G +
Sbjct: 276 GHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRD 335
Query: 381 ENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQ--VLSWGWNKYGQLGLGDSIDRNIP 438
+ +P L + S+ K+ S + ++ G +L W + + L R IP
Sbjct: 336 QLMP--LPVKVSSSEELKLESHTSEKELIMIAGGNQSILLWIKKENSYVNL----KRTIP 389
Query: 439 SL 440
+L
Sbjct: 390 TL 391
Score = 186 (70.5 bits), Expect = 5.6e-11, Sum P(2) = 5.6e-11
Identities = 49/152 (32%), Positives = 78/152 (51%)
Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWH 352
+I+ G HS ++ +G + ++G GQ G G T + PS L + +VE +A G H
Sbjct: 195 QISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSH 254
Query: 353 TVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTE 412
+ ++ +G ++ FG + GQLG Q E P L+ L R ++CG H+
Sbjct: 255 SALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAE--LVGYRVTQIACGRWHTLAYVS 312
Query: 413 D-GQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
D G+V S+G K GQLG G + D+ +P V +
Sbjct: 313 DLGKVFSFGSGKDGQLGNGGTRDQLMPLPVKV 344
Score = 183 (69.5 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 59/215 (27%), Positives = 98/215 (45%)
Query: 255 TPHLIPCLEHAASGKD-RPLLVRQGSVNSSG--KAGRSY-VKEIACGGRHSAVVTDAGAL 310
+P + LE +G LL G + K G++ + + G H +++ G
Sbjct: 59 SPGRLAVLERGGAGVQVHQLLAGSGGARTPKCIKLGKNMKIHSVDQGAEHMLILSSDGK- 117
Query: 311 LTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQF 370
F + Y LR + S L + ++ QI G +H++ +S G ++ +G N
Sbjct: 118 -PFEYDNYSM-------KHLR--FESILQEKKIIQITCGDYHSLALSKGGELFAWGQNLH 167
Query: 371 GQLGTGVD-QAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
GQLG G + P+++E L +S G HS L+ G + SWG N+ GQLGL
Sbjct: 168 GQLGVGRKFPSTTTPQIVEH--LAGVPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGL 225
Query: 430 GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
G + ++ PSL+ + +ACG H+ LL +
Sbjct: 226 GHTESKDDPSLIEGLDNQKVEFVACGGSHSALLTQ 260
Score = 94 (38.1 bits), Expect = 7.1e-22, Sum P(2) = 7.1e-22
Identities = 29/79 (36%), Positives = 42/79 (53%)
Query: 60 CG--FALATSESGKLITWGSADDEGQSYLTSG-KHGETPEPFPLPTEASVVKA--AAGWA 114
CG +LA S+ G+L WG + GQ L G K T P + A V A +AG A
Sbjct: 145 CGDYHSLALSKGGELFAWGQ-NLHGQ--LGVGRKFPSTTTPQIVEHLAGVPLAQISAGEA 201
Query: 115 HCVSVTEAGEVYTWGWREC 133
H ++++ +G +Y+WG EC
Sbjct: 202 HSMALSMSGNIYSWGKNEC 220
Score = 47 (21.6 bits), Expect = 1.3e-23, Sum P(2) = 1.3e-23
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILS 228
+P + L +KI V G H LILS
Sbjct: 87 TPKCIKLGKNMKIHSVDQGAEHMLILS 113
>TAIR|locus:2159295 [details] [associations]
symbol:RUG3 "RCC1/UVR8/GEF-like 3" species:3702
"Arabidopsis thaliana" [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008536 "Ran GTPase binding" evidence=ISS] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0008380 "RNA splicing"
evidence=IMP] [GO:0032981 "mitochondrial respiratory chain complex
I assembly" evidence=IMP] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 EMBL:CP002688 GO:GO:0008380 EMBL:AB015472
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0032981
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 UniGene:At.29139
UniGene:At.50545 HSSP:P18754 IPI:IPI00532631 RefSeq:NP_200895.2
ProteinModelPortal:Q9FJG9 SMR:Q9FJG9 PRIDE:Q9FJG9
EnsemblPlants:AT5G60870.1 GeneID:836208 KEGG:ath:AT5G60870
TAIR:At5g60870 HOGENOM:HOG000030010 InParanoid:Q9FJG9 OMA:ISCGLFH
PhylomeDB:Q9FJG9 ProtClustDB:CLSN2681113 Genevestigator:Q9FJG9
Uniprot:Q9FJG9
Length = 445
Score = 238 (88.8 bits), Expect = 1.4e-23, Sum P(2) = 1.4e-23
Identities = 60/182 (32%), Positives = 93/182 (51%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
++ IA GG HS +T G + T+G+G +G GH +L P D ++ IA
Sbjct: 154 IRCIALGGLHSVALTHQGDVFTWGYGGFGALGHKVYTRELVPRRVDDSWDCKISAIATSG 213
Query: 351 WHTVCISVEGRVYVFGGNQF-GQLGTGVDQAENVPKLLETPI-LESKRAKV--VSCGARH 406
HT I+ G +Y++G + G+LG G + N L P +++ V VSCG
Sbjct: 214 THTAAITESGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALTVPVASVSCGGFF 273
Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETT 465
+ LT++GQ+ +WG N +LG GD++ P VP + G IACG +H+L L E
Sbjct: 274 TMALTKEGQLWNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLALTEEG 333
Query: 466 QI 467
++
Sbjct: 334 KV 335
Score = 188 (71.2 bits), Expect = 7.6e-18, Sum P(3) = 7.6e-18
Identities = 49/157 (31%), Positives = 82/157 (52%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLY---GQCGHG---STNDQLRPSYASSL--MDIQ 342
+ IA G H+A +T++G L + WG G+ G G N+ S S + + +
Sbjct: 206 ISAIATSGTHTAAITESGEL--YMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALTVP 263
Query: 343 VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSC 402
V ++ G + T+ ++ EG+++ +G N +LG G + P + P LE R ++C
Sbjct: 264 VASVSCGGFFTMALTKEGQLWNWGANSNYELGRGDNLGGWEP--MPVPSLEGVRITQIAC 321
Query: 403 GARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS 439
G HS LTE+G+VLSWG +GQLG ++ +P+
Sbjct: 322 GGYHSLALTEEGKVLSWGHGGHGQLGSSSLRNQKVPT 358
Score = 181 (68.8 bits), Expect = 5.2e-17, Sum P(3) = 5.2e-17
Identities = 47/151 (31%), Positives = 75/151 (49%)
Query: 279 SVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSL 338
SV S KA V ++CGG + +T G L +G + G G P SL
Sbjct: 252 SVPSKVKALTVPVASVSCGGFFTMALTKEGQLWNWGANSNYELGRGDNLGGWEPMPVPSL 311
Query: 339 MDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAK 398
+++ QIA G +H++ ++ EG+V +G GQLG+ + + VP +E L K+
Sbjct: 312 EGVRITQIACGGYHSLALTEEGKVLSWGHGGHGQLGSSSLRNQKVPTEIEA--LADKKIV 369
Query: 399 VVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
++ G SA +T+ G++ WG K QLG+
Sbjct: 370 FIASGGSSSAAITDGGELWMWGNAKDFQLGV 400
Score = 180 (68.4 bits), Expect = 7.2e-11, P = 7.2e-11
Identities = 54/181 (29%), Positives = 88/181 (48%)
Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
I+CG HS + D G L +G G G+ G G N P+ + + IA G H+
Sbjct: 106 ISCGLFHSGLTID-GDLWIWGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIALGGLHS 164
Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
V ++ +G V+ +G FG LG V E VP+ ++ + K + + + G H+A +TE
Sbjct: 165 VALTHQGDVFTWGYGGFGALGHKVYTRELVPRRVDDS-WDCKISAIATSGT-HTAAITES 222
Query: 414 GQVLSWGWNKY-GQLGLGDSIDRN------IPSLVPIHGFLPRNIACGWWHTLLLAETTQ 466
G++ WG + G+LGLG N +PS V +++CG + T+ L + Q
Sbjct: 223 GELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALTVPVASVSCGGFFTMALTKEGQ 282
Query: 467 I 467
+
Sbjct: 283 L 283
Score = 147 (56.8 bits), Expect = 5.2e-13, Sum P(3) = 5.2e-13
Identities = 38/125 (30%), Positives = 66/125 (52%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
+ +IACGG HS +T+ G +L++G G +GQ G S +Q P+ +L D ++ IA+G
Sbjct: 316 ITQIACGGYHSLALTEEGKVLSWGHGGHGQLGSSSLRNQKVPTEIEALADKKIVFIASGG 375
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGT-GVDQAENVPK----LLETPILESKRAKVVSCGAR 405
+ I+ G ++++G + QLG G+ + + P L E + + +S GA
Sbjct: 376 SSSAAITDGGELWMWGNAKDFQLGVPGLPEIQTTPVEVNFLTEEDECQPHKVISISIGAS 435
Query: 406 HSAVL 410
H+ L
Sbjct: 436 HALCL 440
Score = 97 (39.2 bits), Expect = 1.4e-23, Sum P(2) = 1.4e-23
Identities = 33/100 (33%), Positives = 46/100 (46%)
Query: 34 EKSPILSPIPARLCGGDSWKDVCGGGCG-FALATSESGKLITWGSADDEGQSYLTSGKHG 92
++S L+ P R+ DS G CG F + G L WG D G+ L G+
Sbjct: 83 DQSFSLAQTPGRI-DADSSSFRIGISCGLFHSGLTIDGDLWIWGKGDG-GR--LGFGQEN 138
Query: 93 ET--PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
P PL E S+ A G H V++T G+V+TWG+
Sbjct: 139 SVFVPNLNPLFEEHSIRCIALGGLHSVALTHQGDVFTWGY 178
Score = 88 (36.0 bits), Expect = 6.0e-12, Sum P(2) = 6.0e-12
Identities = 30/118 (25%), Positives = 51/118 (43%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSW----KDVCGGGCGFALATSESGKLITWG 76
V+ WGY G K +P R+ DSW + G A A +ESG+L WG
Sbjct: 173 VFTWGYGGFGALGHKVYTRELVPRRV--DDSWDCKISAIATSGTHTA-AITESGELYMWG 229
Query: 77 SADDEGQSYLTSGKHGETPEPFPLPTEAS-----VVKAAAGWAHCVSVTEAGEVYTWG 129
+ +G+ L G+ +P++ V + G +++T+ G+++ WG
Sbjct: 230 REEGDGRLGLGPGRGPNEGGGLSVPSKVKALTVPVASVSCGGFFTMALTKEGQLWNWG 287
Score = 69 (29.3 bits), Expect = 7.4e-14, Sum P(2) = 7.4e-14
Identities = 18/75 (24%), Positives = 30/75 (40%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG ++A + G + TWG + + P + + A H
Sbjct: 160 GGL-HSVALTHQGDVFTWGYGGFGALGHKVYTRE-LVPRRVDDSWDCKISAIATSGTHTA 217
Query: 118 SVTEAGEVYTWGWRE 132
++TE+GE+Y WG E
Sbjct: 218 AITESGELYMWGREE 232
Score = 63 (27.2 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
GD P V GV+IT++A GG H+L L++
Sbjct: 297 GDNLGGWEPMPVPSLEGVRITQIACGGYHSLALTE 331
Score = 39 (18.8 bits), Expect = 7.6e-18, Sum P(3) = 7.6e-18
Identities = 12/39 (30%), Positives = 20/39 (51%)
Query: 193 ASGDEFFT--LSPCLVTLNPGVKITKVAAGGRHTLILSD 229
A G + +T L P V + KI+ +A G HT +++
Sbjct: 183 ALGHKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITE 221
>FB|FBgn0035207 [details] [associations]
symbol:CG9153 species:7227 "Drosophila melanogaster"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS;IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 HSSP:Q05086 EMBL:AY128479 ProteinModelPortal:Q8MQN4
SMR:Q8MQN4 PaxDb:Q8MQN4 PRIDE:Q8MQN4 FlyBase:FBgn0035207
InParanoid:Q8MQN4 OrthoDB:EOG4WDBSR ChiTaRS:CG9153
ArrayExpress:Q8MQN4 Bgee:Q8MQN4 Uniprot:Q8MQN4
Length = 1058
Score = 256 (95.2 bits), Expect = 6.1e-23, Sum P(3) = 6.1e-23
Identities = 65/175 (37%), Positives = 91/175 (52%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYA---SSLMDIQVEQIA 347
V +IACG HS +T G L ++G +YGQ G S ND +Y ++L+ I + IA
Sbjct: 145 VVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIA 204
Query: 348 AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHS 407
G H+ IS G V+ +G N GQLG + + P L+T L + + V+CG S
Sbjct: 205 CGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRSYPTQLKT--LRTLGVRFVACGDEFS 262
Query: 408 AVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLL 461
LT +G V + G YGQLG G S + +P +V + G +ACG HTL L
Sbjct: 263 VFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLAL 317
Score = 242 (90.2 bits), Expect = 3.1e-18, Sum P(2) = 3.1e-18
Identities = 62/179 (34%), Positives = 90/179 (50%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
V+++ACG RH+ +T G + G Y Q GH RP L D + QI G
Sbjct: 42 VQQVACGHRHTLFLTATGKVYACGSNDYSQLGHDLPTK--RPLLIPELQDYVIIQICCGS 99
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVD-QAENVPKLLETPILESKRAKVVSCGARHSAV 409
H++ +S G+V +G N GQLG D + +PK++ L +K ++CG HS
Sbjct: 100 RHSLALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQ--LVTKTVVQIACGNNHSLA 157
Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDR---NIP-SLVPIHGFLPRNIACGWWHTLLLAET 464
LT G++ SWG N YGQLG+ D N P L + G IACG H+ L++++
Sbjct: 158 LTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKS 216
Score = 204 (76.9 bits), Expect = 5.4e-19, Sum P(3) = 5.4e-19
Identities = 51/152 (33%), Positives = 80/152 (52%)
Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ---VEQIAAGL 350
IACGG HS +++ +GA+ FGWG CG ND+ SY + L ++ V +A G
Sbjct: 203 IACGGNHSFLISKSGAV--FGWGR-NNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGD 259
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHS-AV 409
+V ++ EG V+ G +GQLG G E +P+++ L V+CG RH+ A+
Sbjct: 260 EFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMVME--LMGSTITQVACGNRHTLAL 317
Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
+ G+V ++G GQLG + +P +V
Sbjct: 318 VPSRGRVYAFGLGSSGQLGTRSTKSLMLPQVV 349
Score = 203 (76.5 bits), Expect = 8.6e-13, P = 8.6e-13
Identities = 59/161 (36%), Positives = 80/161 (49%)
Query: 315 WGL--YGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQF 370
WG +GQ G G D+ L PS D V+Q+A G HT+ ++ G+VY G N +
Sbjct: 10 WGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGSNDY 69
Query: 371 GQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG 430
QLG D P L+ P L+ + CG+RHS L++ GQVLSWG N GQLG
Sbjct: 70 SQLGH--DLPTKRPLLI--PELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDCGQLG-- 123
Query: 431 DSIDRNIPSLVPIHGFLPRN----IACGWWHTLLLAETTQI 467
+ D+ I L + L IACG H+L L ++
Sbjct: 124 HATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGEL 164
Score = 180 (68.4 bits), Expect = 3.0e-16, Sum P(3) = 3.0e-16
Identities = 45/132 (34%), Positives = 71/132 (53%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
V+ +ACG S +T+ G + T G G YGQ GHG +++++ P LM + Q+A G
Sbjct: 252 VRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGN 311
Query: 351 WHTVC-ISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETP-ILESKRAKVVSCGARHSA 408
HT+ + GRVY FG GQLGT ++ +P+++ P + S A + S ++ S
Sbjct: 312 RHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLPQVVIGPWVSPSGSALLQSNDSQVSL 371
Query: 409 VLTEDGQVLSWG 420
V+ Q+ S G
Sbjct: 372 VIR---QIFSGG 380
Score = 138 (53.6 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 34/107 (31%), Positives = 53/107 (49%)
Query: 362 VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
+Y +G GQLG G + E + + P + V+CG RH+ LT G+V + G
Sbjct: 7 LYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGS 66
Query: 422 NKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
N Y QLG + P L+P + ++ I CG H+L L++ Q+
Sbjct: 67 NDYSQLG--HDLPTKRPLLIPELQDYVIIQICCGSRHSLALSDWGQV 111
Score = 99 (39.9 bits), Expect = 5.4e-19, Sum P(3) = 5.4e-19
Identities = 24/73 (32%), Positives = 42/73 (57%)
Query: 60 CG--FALATSESGKLITWGSADDEGQ-SYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
CG +LA S+ G++++WG +D GQ + T + + P+ +VV+ A G H
Sbjct: 97 CGSRHSLALSDWGQVLSWGD-NDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHS 155
Query: 117 VSVTEAGEVYTWG 129
+++T GE+Y+WG
Sbjct: 156 LALTSCGELYSWG 168
Score = 83 (34.3 bits), Expect = 9.6e-06, Sum P(3) = 9.6e-06
Identities = 18/45 (40%), Positives = 25/45 (55%)
Query: 289 SYVKEIACGGRHS-AVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
S + ++ACG RH+ A+V G + FG G GQ G ST + P
Sbjct: 302 STITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLP 346
Score = 75 (31.5 bits), Expect = 6.1e-23, Sum P(3) = 6.1e-23
Identities = 24/65 (36%), Positives = 30/65 (46%)
Query: 69 SGK-LITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
SGK L WGS GQ L G E TP P + +V + A G H + +T G+
Sbjct: 3 SGKELYCWGSTS-HGQLGL-GGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGK 60
Query: 125 VYTWG 129
VY G
Sbjct: 61 VYACG 65
Score = 73 (30.8 bits), Expect = 5.8e-13, Sum P(2) = 5.8e-13
Identities = 26/86 (30%), Positives = 38/86 (44%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKH-GETPEPFPLPTEASVVKA 109
K V CG +LA + G+L +WGS + GQ + S P L T + A
Sbjct: 143 KTVVQIACGNNHSLALTSCGELYSWGS-NIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLA 201
Query: 110 A--AGWAHCVSVTEAGEVYTWGWREC 133
A G H ++++G V+ WG C
Sbjct: 202 AIACGGNHSFLISKSGAVFGWGRNNC 227
Score = 69 (29.3 bits), Expect = 3.1e-21, Sum P(2) = 3.1e-21
Identities = 20/78 (25%), Positives = 36/78 (46%)
Query: 60 CGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT--EASVVKAAAGWAH 115
CG L + +GK+ GS D Y G T P +P + +++ G H
Sbjct: 47 CGHRHTLFLTATGKVYACGSND-----YSQLGHDLPTKRPLLIPELQDYVIIQICCGSRH 101
Query: 116 CVSVTEAGEVYTWGWREC 133
+++++ G+V +WG +C
Sbjct: 102 SLALSDWGQVLSWGDNDC 119
Score = 56 (24.8 bits), Expect = 7.1e-20, Sum P(2) = 7.1e-20
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILS 228
L+P + P + +VA G RHTL L+
Sbjct: 29 LTPSQIPWTPDTAVQQVACGHRHTLFLT 56
Score = 50 (22.7 bits), Expect = 6.1e-23, Sum P(3) = 6.1e-23
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
G + T P L+ I ++ G RH+L LSD
Sbjct: 73 GHDLPTKRPLLIPELQDYVIIQICCGSRHSLALSD 107
Score = 48 (22.0 bits), Expect = 5.4e-19, Sum P(3) = 5.4e-19
Identities = 8/26 (30%), Positives = 15/26 (57%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILS 228
P +T G+ + +A GG H+ ++S
Sbjct: 189 PLRLTTLLGIPLAAIACGGNHSFLIS 214
>RGD|1307803 [details] [associations]
symbol:Herc3 "HECT and RLD domain containing E3 ubiquitin
protein ligase 3" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0005737 "cytoplasm" evidence=ISO;IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 RGD:1307803
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 EMBL:CH474011 IPI:IPI00568958 UniGene:Rn.203362
Ensembl:ENSRNOT00000009694 UCSC:RGD:1307803 Uniprot:D3ZYI2
Length = 909
Score = 247 (92.0 bits), Expect = 4.0e-17, Sum P(2) = 4.0e-17
Identities = 61/193 (31%), Positives = 95/193 (49%)
Query: 276 RQGSVNSS-GKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR-PS 333
R+G+ G ++ +ACG HS ++D G L ++G G GQ G +T D + P
Sbjct: 70 REGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPR 129
Query: 334 YASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD-QAENVPKLLETPIL 392
L + Q++ G WH + ++ +G+ + +G N GQLG G + ++ P+ + + L
Sbjct: 130 LIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRS--L 187
Query: 393 ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI-HGFLPRNI 451
E V+ G HS L+ G V WG N GQLGL D DR P V + I
Sbjct: 188 EGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYI 247
Query: 452 ACGWWHTLLLAET 464
+CG HT +L ++
Sbjct: 248 SCGEEHTAVLTKS 260
Score = 240 (89.5 bits), Expect = 2.6e-16, Sum P(2) = 2.6e-16
Identities = 57/175 (32%), Positives = 87/175 (49%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
+KE+ACGG HS + + G + T G GQ GH + +P +L D + +A G
Sbjct: 36 IKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN--KPEQIGALADQHIIHVACGE 93
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGT-GVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
H++ +S G+++ +G GQLG + + VP+L++ L + VSCG H
Sbjct: 94 SHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK--LNQQTILQVSCGNWHCLA 151
Query: 410 LTEDGQVLSWGWNKYGQLGLGDSI-DRNIPSLV-PIHGFLPRNIACGWWHTLLLA 462
L DGQ +WG N +GQLGLG + P V + G +A G H+ L+
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALS 206
Score = 235 (87.8 bits), Expect = 6.4e-23, Sum P(2) = 6.4e-23
Identities = 60/184 (32%), Positives = 92/184 (50%)
Query: 285 KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST-NDQLRPSYASSLMDIQV 343
K + + +++CG H + G T+G +GQ G G Q P SL I +
Sbjct: 133 KLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPL 192
Query: 344 EQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCG 403
Q+AAG H+ +S+ G V+ +G N GQLG ++ P +L +++ +SCG
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESP--CHVKLLRTQKVVYISCG 250
Query: 404 ARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI-PSLV-PIHGFLPRNIACGWWHTLLL 461
H+AVLT+ G V ++G GQLG DS++ + P V + G IACG HTL L
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLG-HDSVNDEVNPRRVLELMGSEVTQIACGRQHTLAL 309
Query: 462 AETT 465
++
Sbjct: 310 VPSS 313
Score = 191 (72.3 bits), Expect = 6.7e-18, Sum P(2) = 6.7e-18
Identities = 50/156 (32%), Positives = 78/156 (50%)
Query: 293 EIACGGRHSAVVTDAGALLTFGWGLY--GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
++A GG HS ++ +GA+ FGWG+ GQ G D+ P + L +V I+ G
Sbjct: 194 QVAAGGAHSFALSLSGAV--FGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGE 251
Query: 351 WHTVCISVEGRVYVFGGNQFGQLG-TGVDQAENVPKLLETPILESKRAKVVSCGARHS-A 408
HT ++ G V+ FG GQLG V+ N ++LE L ++CG +H+ A
Sbjct: 252 EHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLE---LMGSEVTQIACGRQHTLA 308
Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIH 444
++ G + ++G GQLG G + + PS V H
Sbjct: 309 LVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKGH 344
Score = 179 (68.1 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 51/161 (31%), Positives = 79/161 (49%)
Query: 310 LLTFGWGLYGQCGHGSTNDQL--RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
+L +G+ GQ G S + P + D ++++A G H+V + +G VY G
Sbjct: 1 MLCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGV 60
Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
N GQLG ++ N P+ + L + V+CG HS L++ GQ+ SWG GQL
Sbjct: 61 NTKGQLGH--EREGNKPEQIGA--LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQL 116
Query: 428 GLGDSIDR-NIPSLVP-IHGFLPRNIACGWWHTLLLAETTQ 466
GL + D +P L+ ++ ++CG WH L LA Q
Sbjct: 117 GLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQ 157
Score = 117 (46.2 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 37/171 (21%), Positives = 69/171 (40%)
Query: 60 CG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
CG +LA S+ G+L +WG+ D +T+ P + ++++ + G HC+
Sbjct: 91 CGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCL 150
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV 177
++ G+ +TWG + + ++F S S Q+ +P Q + +
Sbjct: 151 ALAADGQFFTWG-KNSHGQLGLGKEFPSQTSPQR--VRSLEGIPLAQVAAGGAHSFALSL 207
Query: 178 KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ DE SPC V L K+ ++ G HT +L+
Sbjct: 208 SGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Score = 107 (42.7 bits), Expect = 6.4e-23, Sum P(2) = 6.4e-23
Identities = 32/111 (28%), Positives = 53/111 (47%)
Query: 25 WGYL----PGTSPEKSPILS-PIPARLCGGDSWKDV-CGGGCGFALATSESGKLITWGSA 78
WGY PG S I++ P R S K+V CGG L E G++ T G
Sbjct: 4 WGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLL--EDGEVYTCG-V 60
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ +GQ L + G PE + ++ A G +H +++++ G++++WG
Sbjct: 61 NTKGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWG 109
Score = 94 (38.1 bits), Expect = 8.8e-05, Sum P(2) = 8.8e-05
Identities = 30/94 (31%), Positives = 42/94 (44%)
Query: 40 SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
SP R G V GG + A S SG + WG ++ GQ L+ K E+P
Sbjct: 180 SPQRVRSLEGIPLAQVAAGGA-HSFALSLSGAVFGWGM-NNAGQLGLSDEKDRESPCHVK 237
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
L VV + G H +T++G V+T+G C
Sbjct: 238 LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSC 271
Score = 83 (34.3 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 20/46 (43%), Positives = 27/46 (58%)
Query: 289 SYVKEIACGGRHS-AVVTDAGALLTFGWGLYGQCGHGSTNDQLRPS 333
S V +IACG +H+ A+V +G + FG G GQ G G T + PS
Sbjct: 294 SEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPS 339
Score = 39 (18.8 bits), Expect = 7.8e-16, Sum P(2) = 7.8e-16
Identities = 9/16 (56%), Positives = 10/16 (62%)
Query: 214 ITKVAAGGRHTLILSD 229
I VA G H+L LSD
Sbjct: 86 IIHVACGESHSLALSD 101
Score = 38 (18.4 bits), Expect = 4.0e-17, Sum P(2) = 4.0e-17
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 214 ITKVAAGGRHTLIL 227
I +VA GG H++ L
Sbjct: 36 IKEVACGGNHSVFL 49
>UNIPROTKB|O95199 [details] [associations]
symbol:RCBTB2 "RCC1 and BTB domain-containing protein 2"
species:9606 "Homo sapiens" [GO:0005087 "Ran guanyl-nucleotide
exchange factor activity" evidence=TAS] InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CH471075 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
HOVERGEN:HBG053261 KO:K11494 EMBL:AF060219 EMBL:AY341245
EMBL:AK315703 EMBL:AL157813 EMBL:BC029052 IPI:IPI00658195
IPI:IPI00941277 PIR:T50663 RefSeq:NP_001259.1 UniGene:Hs.652712
ProteinModelPortal:O95199 SMR:O95199 IntAct:O95199
MINT:MINT-1481780 STRING:O95199 PhosphoSite:O95199 PRIDE:O95199
DNASU:1102 Ensembl:ENST00000344532 GeneID:1102 KEGG:hsa:1102
UCSC:uc001vch.3 CTD:1102 GeneCards:GC13M049063 HGNC:HGNC:1914
HPA:HPA040242 MIM:603524 neXtProt:NX_O95199 PharmGKB:PA26450
InParanoid:O95199 OrthoDB:EOG4M91R6 PhylomeDB:O95199 ChiTaRS:RCBTB2
GenomeRNAi:1102 NextBio:4558 ArrayExpress:O95199 Bgee:O95199
CleanEx:HS_RCBTB2 Genevestigator:O95199 GermOnline:ENSG00000136161
Uniprot:O95199
Length = 551
Score = 286 (105.7 bits), Expect = 8.7e-23, P = 8.7e-23
Identities = 62/182 (34%), Positives = 105/182 (57%)
Query: 292 KEIAC----GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVEQI 346
K+IAC G H + T G + T+G Y Q G+G+TN L P + S+ L + QV ++
Sbjct: 98 KKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV 157
Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
A G +H++ ++ +G V+ +G N GQ+G+G + +P+ + T L++K ++CG
Sbjct: 158 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRV-TGCLQNKVVVTIACGQMC 216
Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETT 465
+ + G+V WG+N GQLGLG+S ++ P V + G + +ACG+ HTL+L +
Sbjct: 217 CMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEG 276
Query: 466 QI 467
Q+
Sbjct: 277 QV 278
Score = 258 (95.9 bits), Expect = 9.1e-21, Sum P(2) = 9.1e-21
Identities = 69/182 (37%), Positives = 94/182 (51%)
Query: 279 SVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS- 337
S N S K V E+ACG HS V+T G + +G+ GQ G GST +Q P +
Sbjct: 146 STNLSNKQ----VIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGC 201
Query: 338 LMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRA 397
L + V IA G + + G VYV+G N GQLG G + N P L+ R
Sbjct: 202 LQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLG--NSGNQPTPCRVAALQGIRV 259
Query: 398 KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIA-CGWW 456
+ V+CG H+ VLT++GQV +WG N YGQLG G+ +++ P+ V + IA C
Sbjct: 260 QRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHST 319
Query: 457 HT 458
HT
Sbjct: 320 HT 321
Score = 213 (80.0 bits), Expect = 8.9e-17, Sum P(3) = 8.9e-17
Identities = 48/133 (36%), Positives = 75/133 (56%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
V IACG V D G + +G+ GQ G G++ +Q P ++L I+V+++A G
Sbjct: 207 VVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGY 266
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI-LESKRA-KVVSCGARH-S 407
HT+ ++ EG+VY +G N +GQLGTG ++ P TP+ +E R ++ +C + H S
Sbjct: 267 AHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP----TPVTVEKDRIIEIAACHSTHTS 322
Query: 408 AVLTEDGQVLSWG 420
A T+ G V WG
Sbjct: 323 AAKTQGGHVYMWG 335
Score = 131 (51.2 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 36/113 (31%), Positives = 51/113 (45%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S + PIP R+ G K V CG +A ++G++ WG
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGY- 231
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEAS--VVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 232 --NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282
Score = 131 (51.2 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 34/114 (29%), Positives = 59/114 (51%)
Query: 357 SVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGAR-HSAVLTEDGQ 415
+V ++V G N G LG G Q+ P+ L++ L K+ +S G+ H + T +G+
Sbjct: 62 TVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDS--LNGKKIACLSYGSGPHIVLATTEGE 119
Query: 416 VLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR--NIACGWWHTLLLAETTQI 467
V +WG N Y QLG G + +P + + + +ACG +H+L+L ++
Sbjct: 120 VFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEV 173
Score = 92 (37.4 bits), Expect = 0.00094, Sum P(2) = 0.00094
Identities = 28/94 (29%), Positives = 42/94 (44%)
Query: 42 IPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P + S K V CG +L + G++ WG ++ GQ + SG P P
Sbjct: 141 VPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY-NNSGQ--VGSGSTVNQPIPRR 197
Query: 100 LP---TEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+ VV A G C++V + GEVY WG+
Sbjct: 198 VTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGY 231
Score = 70 (29.7 bits), Expect = 0.00094, Sum P(2) = 0.00094
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSD 229
+PC V G+++ +VA G HTL+L+D
Sbjct: 247 TPCRVAALQGIRVQRVACGYAHTLVLTD 274
Score = 52 (23.4 bits), Expect = 9.1e-21, Sum P(2) = 9.1e-21
Identities = 9/15 (60%), Positives = 10/15 (66%)
Query: 115 HCVSVTEAGEVYTWG 129
H V T GEV+TWG
Sbjct: 110 HIVLATTEGEVFTWG 124
Score = 50 (22.7 bits), Expect = 8.9e-17, Sum P(3) = 8.9e-17
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILS 228
L PC ++ N K + +VA G H+L+L+
Sbjct: 140 LVPCHISTNLSNKQVIEVACGSYHSLVLT 168
>UNIPROTKB|A2VDP7 [details] [associations]
symbol:HERC3 "HERC3 protein" species:9913 "Bos taurus"
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 GeneTree:ENSGT00660000095216 CTD:8916
HOGENOM:HOG000208452 HOVERGEN:HBG050878 KO:K10614 OMA:SPAVDFR
OrthoDB:EOG4RBQHS EMBL:DAAA02017014 EMBL:BC133341 IPI:IPI00710875
RefSeq:NP_001077132.1 UniGene:Bt.85959 Ensembl:ENSBTAT00000013357
GeneID:510924 KEGG:bta:510924 InParanoid:A2VDP7 NextBio:20869685
Uniprot:A2VDP7
Length = 1050
Score = 241 (89.9 bits), Expect = 3.9e-16, Sum P(2) = 3.9e-16
Identities = 57/175 (32%), Positives = 87/175 (49%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
VKE+ACGG HS + + G + T G GQ GH + +P +L D + +A G
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN--KPEQIGALADQHIVHVACGE 93
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGT-GVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
H++ +S +G+++ +G GQLG ++ + VP+L++ L + VSCG H
Sbjct: 94 SHSLALSDQGQLFSWGAGSDGQLGLMTIEDSVAVPRLIQK--LNQQTILQVSCGNWHCLA 151
Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNI-PSLV-PIHGFLPRNIACGWWHTLLLA 462
L DGQ +WG N +GQLGLG P V + G + G H+ L+
Sbjct: 152 LAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFALS 206
Score = 239 (89.2 bits), Expect = 6.6e-16, Sum P(2) = 6.6e-16
Identities = 63/194 (32%), Positives = 98/194 (50%)
Query: 276 RQGSVNSS-GKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR-PS 333
R+G+ G ++ +ACG HS ++D G L ++G G GQ G + D + P
Sbjct: 70 REGNKPEQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTIEDSVAVPR 129
Query: 334 YASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD-QAENVPKLLETPIL 392
L + Q++ G WH + ++ +G+ + +G N GQLG G + ++ P+ + + L
Sbjct: 130 LIQKLNQQTILQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRS--L 187
Query: 393 ES-KRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI-HGFLPRN 450
E A+VV+ GA HS L+ G V WG N GQLGL D DR P V +
Sbjct: 188 EGIPLAQVVAGGA-HSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVY 246
Query: 451 IACGWWHTLLLAET 464
I+CG HT +L ++
Sbjct: 247 ISCGEEHTAVLTKS 260
Score = 225 (84.3 bits), Expect = 2.0e-22, Sum P(2) = 2.0e-22
Identities = 58/178 (32%), Positives = 88/178 (49%)
Query: 285 KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST-NDQLRPSYASSLMDIQV 343
K + + +++CG H + G T+G +GQ G G Q P SL I +
Sbjct: 133 KLNQQTILQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPL 192
Query: 344 EQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCG 403
Q+ AG H+ +S+ G V+ +G N GQLG ++ P +L +++ +SCG
Sbjct: 193 AQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESP--CHVKLLRTQKVVYISCG 250
Query: 404 ARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI-PSLV-PIHGFLPRNIACGWWHTL 459
H+AVLT+ G V ++G GQLG DS++ + P V + G IACG HTL
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTL 307
Score = 189 (71.6 bits), Expect = 9.2e-19, Sum P(2) = 9.2e-19
Identities = 39/84 (46%), Positives = 50/84 (59%)
Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
I+CG H+AV+T +G + TFG G GQ GH S ND++ P LM +V QIA G HT
Sbjct: 247 ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHT 306
Query: 354 VC-ISVEGRVYVFGGNQFGQLGTG 376
+ + G +Y FG GQLGTG
Sbjct: 307 LAFVPSSGLIYAFGCGARGQLGTG 330
Score = 179 (68.1 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 54/162 (33%), Positives = 79/162 (48%)
Query: 310 LLTFGWGLYGQCGHGSTNDQ---LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFG 366
+L +G+ GQ G S N Q P + D V+++A G H+V + +G VY G
Sbjct: 1 MLCWGYWSLGQPGI-SPNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG 59
Query: 367 GNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQ 426
N GQLG ++ N P+ + L + V+CG HS L++ GQ+ SWG GQ
Sbjct: 60 VNTKGQLGH--EREGNKPEQIGA--LADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQ 115
Query: 427 LGLGDSIDR-NIPSLVP-IHGFLPRNIACGWWHTLLLAETTQ 466
LGL D +P L+ ++ ++CG WH L LA Q
Sbjct: 116 LGLMTIEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQ 157
Score = 119 (46.9 bits), Expect = 9.2e-19, Sum P(2) = 9.2e-19
Identities = 38/171 (22%), Positives = 68/171 (39%)
Query: 60 CG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
CG +LA S+ G+L +WG+ D +T P + ++++ + G HC+
Sbjct: 91 CGESHSLALSDQGQLFSWGAGSDGQLGLMTIEDSVAVPRLIQKLNQQTILQVSCGNWHCL 150
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV 177
++ G+ +TWG R + ++F S S Q+ +P Q + +
Sbjct: 151 ALAADGQFFTWG-RNSHGQLGLGKEFPSQASPQR--VRSLEGIPLAQVVAGGAHSFALSL 207
Query: 178 KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ DE SPC V L K+ ++ G HT +L+
Sbjct: 208 SGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Score = 115 (45.5 bits), Expect = 2.0e-22, Sum P(2) = 2.0e-22
Identities = 36/111 (32%), Positives = 56/111 (50%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCG--GD-SWKDV-CGGGCGFALATSESGKLITWGSA 78
WGY P SP L I A ++CG D S K+V CGG L E G++ T G
Sbjct: 4 WGYWSLGQPGISPNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLL--EDGEVYTCG-V 60
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ +GQ L + G PE + +V A G +H +++++ G++++WG
Sbjct: 61 NTKGQ--LGHEREGNKPEQIGALADQHIVHVACGESHSLALSDQGQLFSWG 109
Score = 95 (38.5 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 28/79 (35%), Positives = 39/79 (49%)
Query: 55 VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWA 114
V GG FAL S SG + WG ++ GQ L+ K E+P L VV + G
Sbjct: 196 VAGGAHSFAL--SLSGAVFGWGM-NNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252
Query: 115 HCVSVTEAGEVYTWGWREC 133
H +T++G V+T+G C
Sbjct: 253 HTAVLTKSGGVFTFGAGSC 271
Score = 81 (33.6 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 20/46 (43%), Positives = 26/46 (56%)
Query: 289 SYVKEIACGGRHS-AVVTDAGALLTFGWGLYGQCGHGSTNDQLRPS 333
S V +IACG +H+ A V +G + FG G GQ G G T + PS
Sbjct: 294 SEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPS 339
Score = 40 (19.1 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 9/16 (56%), Positives = 10/16 (62%)
Query: 214 ITKVAAGGRHTLILSD 229
I VA G H+L LSD
Sbjct: 86 IVHVACGESHSLALSD 101
Score = 37 (18.1 bits), Expect = 3.9e-16, Sum P(2) = 3.9e-16
Identities = 6/14 (42%), Positives = 10/14 (71%)
Query: 214 ITKVAAGGRHTLIL 227
+ +VA GG H++ L
Sbjct: 36 VKEVACGGNHSVFL 49
>TAIR|locus:2205794 [details] [associations]
symbol:AT1G27060 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 EMBL:BT030023 IPI:IPI00535833 RefSeq:NP_174026.1
UniGene:At.41142 UniGene:At.50938 ProteinModelPortal:A2RVN2
SMR:A2RVN2 DNASU:839595 EnsemblPlants:AT1G27060.1 GeneID:839595
KEGG:ath:AT1G27060 TAIR:At1g27060 HOGENOM:HOG000236375
InParanoid:A2RVN2 OMA:GYIYAWG PhylomeDB:A2RVN2
ProtClustDB:CLSN2682864 Genevestigator:A2RVN2 Uniprot:A2RVN2
Length = 386
Score = 223 (83.6 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 55/153 (35%), Positives = 75/153 (49%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
+ +ACGG H +T G + T+G G GQ GHG + P S D + Q AAG
Sbjct: 50 ISMLACGGAHVIALTSGGKVFTWGRGSSGQLGHGDILNITLPKLVSFFDDSVITQAAAGW 109
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
H+ +S G ++ G FGQLG G + + P + + K+V+CG RHS VL
Sbjct: 110 SHSGFVSDSGCIFTCGNGSFGQLGHGDTLSLSTPAKVSH--FNNDSVKMVACGMRHSLVL 167
Query: 411 TEDGQVLSWGWNKYGQLGLG-DSIDR-NIPSLV 441
QV +G K GQLG D I N+P +V
Sbjct: 168 FAGNQVCGFGSGKRGQLGFSSDRIKSVNLPCVV 200
Score = 220 (82.5 bits), Expect = 2.9e-22, Sum P(3) = 2.9e-22
Identities = 57/173 (32%), Positives = 85/173 (49%)
Query: 289 SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
S + + A G HS V+D+G + T G G +GQ GHG T P+ S + V+ +A
Sbjct: 100 SVITQAAAGWSHSGFVSDSGCIFTCGNGSFGQLGHGDTLSLSTPAKVSHFNNDSVKMVAC 159
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
G+ H++ + +V FG + GQLG D+ ++V L+ +S HSA
Sbjct: 160 GMRHSLVLFAGNQVCGFGSGKRGQLGFSSDRIKSVNLPCVVSGLKDVEVVRISANGDHSA 219
Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLL 461
++ DGQ SWG G G +++PS P+ F R +A GW H LLL
Sbjct: 220 AISADGQFFSWGRGFCG--GPDVHAPQSLPS--PL-SF--REVAVGWNHALLL 265
Score = 200 (75.5 bits), Expect = 3.8e-20, Sum P(3) = 3.8e-20
Identities = 51/154 (33%), Positives = 79/154 (51%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
V I+ G HSA ++ G F WG G CG G D P S + + ++A G
Sbjct: 208 VVRISANGDHSAAISADGQF--FSWGR-GFCG-GP--DVHAPQSLPSPLSFR--EVAVGW 259
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE-TPILESKRAKVVSCGARHSAV 409
H + ++V+G V+ G Q Q ++ L E P + + ++ GA HSA
Sbjct: 260 NHALLLTVDGEVFKLGSTLNKQPEKQQLQIDSSEALFEKVPDFDGVKVMQIAAGAEHSAA 319
Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
+TE+G+V +WGW ++GQLGLG++ D+ P LV +
Sbjct: 320 VTENGEVKTWGWGEHGQLGLGNTNDQTSPELVSL 353
Score = 168 (64.2 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 43/157 (27%), Positives = 74/157 (47%)
Query: 312 TFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
++G G GQ G D+L P S + +A G H + ++ G+V+ +G G
Sbjct: 19 SWGAGTDGQLGTTKLQDELLPQLLSLTSLPSISMLACGGAHVIALTSGGKVFTWGRGSSG 78
Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
QLG G +PKL+ + + G HS +++ G + + G +GQLG GD
Sbjct: 79 QLGHGDILNITLPKLVS--FFDDSVITQAAAGWSHSGFVSDSGCIFTCGNGSFGQLGHGD 136
Query: 432 SIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
++ + P+ V + + +ACG H+L+L Q+
Sbjct: 137 TLSLSTPAKVSHFNNDSVKMVACGMRHSLVLFAGNQV 173
Score = 151 (58.2 bits), Expect = 9.3e-08, P = 9.3e-08
Identities = 37/107 (34%), Positives = 56/107 (52%)
Query: 359 EGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLS 418
E +V+ +G GQLGT Q E +P+LL L S +++CG H LT G+V +
Sbjct: 14 EEQVWSWGAGTDGQLGTTKLQDELLPQLLSLTSLPS--ISMLACGGAHVIALTSGGKVFT 71
Query: 419 WGWNKYGQLGLGDSIDRNIPSLVPIHG-FLPRNIACGWWHTLLLAET 464
WG GQLG GD ++ +P LV + A GW H+ ++++
Sbjct: 72 WGRGSSGQLGHGDILNITLPKLVSFFDDSVITQAAAGWSHSGFVSDS 118
Score = 106 (42.4 bits), Expect = 6.4e-09, Sum P(3) = 6.4e-09
Identities = 32/121 (26%), Positives = 58/121 (47%)
Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMD-------IQVE 344
+E+A G H+ ++T G + G L Q QL+ + +L + ++V
Sbjct: 253 REVAVGWNHALLLTVDGEVFKLGSTLNKQ----PEKQQLQIDSSEALFEKVPDFDGVKVM 308
Query: 345 QIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKV-VSCG 403
QIAAG H+ ++ G V +G + GQLG G + P+L+ ++ + ++ V CG
Sbjct: 309 QIAAGAEHSAAVTENGEVKTWGWGEHGQLGLGNTNDQTSPELVSLGSIDLRTKEIKVYCG 368
Query: 404 A 404
+
Sbjct: 369 S 369
Score = 90 (36.7 bits), Expect = 2.9e-22, Sum P(3) = 2.9e-22
Identities = 20/62 (32%), Positives = 33/62 (53%)
Query: 68 ESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYT 127
E ++ +WG+ D GQ T + P+ L + S+ A G AH +++T G+V+T
Sbjct: 13 EEEQVWSWGAGTD-GQLGTTKLQDELLPQLLSLTSLPSISMLACGGAHVIALTSGGKVFT 71
Query: 128 WG 129
WG
Sbjct: 72 WG 73
Score = 89 (36.4 bits), Expect = 4.8e-20, Sum P(3) = 4.8e-20
Identities = 22/74 (29%), Positives = 37/74 (50%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAH 115
CGG +A + GK+ TWG GQ + P+ ++ + +AAAGW+H
Sbjct: 55 CGGA--HVIALTSGGKVFTWGRGSS-GQLGHGDILNITLPKLVSFFDDSVITQAAAGWSH 111
Query: 116 CVSVTEAGEVYTWG 129
V+++G ++T G
Sbjct: 112 SGFVSDSGCIFTCG 125
Score = 49 (22.3 bits), Expect = 3.8e-20, Sum P(3) = 3.8e-20
Identities = 10/36 (27%), Positives = 22/36 (61%)
Query: 194 SGDEFFTLS-PCLVTLNPGVKITKVAAGGRHTLILS 228
S D +++ PC+V+ V++ +++A G H+ +S
Sbjct: 187 SSDRIKSVNLPCVVSGLKDVEVVRISANGDHSAAIS 222
Score = 44 (20.5 bits), Expect = 2.9e-22, Sum P(3) = 2.9e-22
Identities = 15/44 (34%), Positives = 19/44 (43%)
Query: 186 REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
R S GD P LV+ IT+ AAG H+ +SD
Sbjct: 74 RGSSGQLGHGDILNITLPKLVSFFDDSVITQAAAGWSHSGFVSD 117
Score = 43 (20.2 bits), Expect = 1.6e-19, Sum P(3) = 1.6e-19
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL 227
GD +P V+ + VA G RH+L+L
Sbjct: 135 GDTLSLSTPAKVSHFNNDSVKMVACGMRHSLVL 167
Score = 43 (20.2 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILS 228
L P L++L I+ +A GG H + L+
Sbjct: 37 LLPQLLSLTSLPSISMLACGGAHVIALT 64
>MGI|MGI:1917200 [details] [associations]
symbol:Rcbtb2 "regulator of chromosome condensation (RCC1)
and BTB (POZ) domain containing protein 2" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651
PROSITE:PS50097 SMART:SM00225 MGI:MGI:1917200 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104208 HOGENOM:HOG000065752
HOVERGEN:HBG053261 KO:K11494 CTD:1102 OrthoDB:EOG4M91R6
ChiTaRS:RCBTB2 EMBL:AK031242 EMBL:AK031248 EMBL:AK160881
EMBL:BC003224 IPI:IPI00308981 IPI:IPI00661148 RefSeq:NP_001164165.1
RefSeq:NP_598844.3 UniGene:Mm.280068 ProteinModelPortal:Q99LJ7
SMR:Q99LJ7 STRING:Q99LJ7 PhosphoSite:Q99LJ7 PaxDb:Q99LJ7
PRIDE:Q99LJ7 Ensembl:ENSMUST00000022702 Ensembl:ENSMUST00000110952
Ensembl:ENSMUST00000164822 Ensembl:ENSMUST00000169479
Ensembl:ENSMUST00000169513 Ensembl:ENSMUST00000170677 GeneID:105670
KEGG:mmu:105670 UCSC:uc007upj.2 UCSC:uc007upm.2 InParanoid:Q99LJ7
OMA:QMCSMAV NextBio:357822 Bgee:Q99LJ7 Genevestigator:Q99LJ7
GermOnline:ENSMUSG00000022106 Uniprot:Q99LJ7
Length = 551
Score = 281 (104.0 bits), Expect = 3.5e-22, P = 3.5e-22
Identities = 60/172 (34%), Positives = 100/172 (58%)
Query: 298 GRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVEQIAAGLWHTVCI 356
G H + T G + T+G Y Q G+G+TN L P + S+ L + QV ++A G +H++ +
Sbjct: 108 GPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVL 167
Query: 357 SVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQV 416
+ +G V+ +G N GQ+G+G + +P+ + T L++K ++CG S + + G+V
Sbjct: 168 TSDGEVFAWGYNNSGQVGSGSTANQPIPRRV-TGCLQNKVVMNIACGQMCSMAVVDTGEV 226
Query: 417 LSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
WG+N GQLGLG S ++ P V + G + +ACG+ HTL+L + QI
Sbjct: 227 YVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQI 278
Score = 259 (96.2 bits), Expect = 1.3e-19, P = 1.3e-19
Identities = 63/166 (37%), Positives = 90/166 (54%)
Query: 279 SVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS- 337
S N S K V E+ACG HS V+T G + +G+ GQ G GST +Q P +
Sbjct: 146 STNLSNKQ----VIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGC 201
Query: 338 LMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRA 397
L + V IA G ++ + G VYV+G N GQLG G + N P L+ R
Sbjct: 202 LQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLG--SSGNQPTPCRVAALQGIRV 259
Query: 398 KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
+ V+CG H+ VLT++GQ+ +WG N YGQLG G+ +++ P+ V +
Sbjct: 260 QRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVV 305
Score = 222 (83.2 bits), Expect = 2.1e-20, Sum P(2) = 2.1e-20
Identities = 49/133 (36%), Positives = 76/133 (57%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
V IACG S V D G + +G+ GQ G GS+ +Q P ++L I+V+++A G
Sbjct: 207 VMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGY 266
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL-ESKRA-KVVSCGARH-S 407
HT+ ++ EG++Y +G N +GQLGTG ++ P TP++ E R ++ +C + H S
Sbjct: 267 AHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYP----TPVVVEKDRIIEIAACHSAHTS 322
Query: 408 AVLTEDGQVLSWG 420
A T+ G V WG
Sbjct: 323 AAKTQGGHVYMWG 335
Score = 134 (52.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 35/114 (30%), Positives = 59/114 (51%)
Query: 357 SVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGAR-HSAVLTEDGQ 415
+V ++V G N G LG G Q+ P+ L++ L K+ +S G+ H + T DG+
Sbjct: 62 TVNDEIFVLGTNCSGCLGVGDIQSTIEPRRLDS--LTGKKIASLSYGSGPHIVLATTDGE 119
Query: 416 VLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR--NIACGWWHTLLLAETTQI 467
V +WG N Y QLG G + +P + + + +ACG +H+L+L ++
Sbjct: 120 VFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEV 173
Score = 129 (50.5 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 35/113 (30%), Positives = 51/113 (45%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S PIP R+ G K V CG ++A ++G++ WG
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGY- 231
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEAS--VVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G++Y WG
Sbjct: 232 --NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWG 282
Score = 90 (36.7 bits), Expect = 2.1e-20, Sum P(2) = 2.1e-20
Identities = 25/77 (32%), Positives = 37/77 (48%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGW 113
G G LAT++ G++ TWG S L +G P + T S V++ A G
Sbjct: 106 GSGPHIVLATTD-GEVFTWGH---NAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGS 161
Query: 114 AHCVSVTEAGEVYTWGW 130
H + +T GEV+ WG+
Sbjct: 162 YHSLVLTSDGEVFAWGY 178
Score = 50 (22.7 bits), Expect = 3.1e-16, Sum P(2) = 3.1e-16
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILS 228
L PC ++ N K + +VA G H+L+L+
Sbjct: 140 LVPCHISTNLSNKQVIEVACGSYHSLVLT 168
>UNIPROTKB|E2RDC2 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0032183 "SUMO binding" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0020037 "heme
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005743
GO:GO:0046872 GO:GO:0008270 GO:GO:0006281 GO:GO:0007283
GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
Gene3D:2.30.30.30 InterPro:IPR021097 InterPro:IPR014722
Pfam:PF11515 SUPFAM:SSF56204 GeneTree:ENSGT00700000104208 CTD:8924
KO:K10595 OMA:QLAFTRD InterPro:IPR006624 SMART:SM00706
EMBL:AAEX03002160 EMBL:AAEX03002161 EMBL:AAEX03002162
RefSeq:XP_536160.2 ProteinModelPortal:E2RDC2
Ensembl:ENSCAFT00000015697 GeneID:479005 KEGG:cfa:479005
Uniprot:E2RDC2
Length = 4837
Score = 280 (103.6 bits), Expect = 5.6e-21, Sum P(2) = 5.6e-21
Identities = 66/188 (35%), Positives = 98/188 (52%)
Query: 283 SGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ 342
SGK +V IACG +SA +T G L T+G G YG+ GHGS+ D+ P + L ++
Sbjct: 546 SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 605
Query: 343 VEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVV 400
V +A G T+ ++ G+V+ +G +G+LG G PKL+E L+ V
Sbjct: 606 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK--LQDLDVVKV 663
Query: 401 SCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTL 459
CG++ S LT+DGQV SWG +LG G P L+ + G ++A G H L
Sbjct: 664 RCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCL 723
Query: 460 LLAETTQI 467
L E +++
Sbjct: 724 ALTEDSEV 731
Score = 231 (86.4 bits), Expect = 3.9e-22, Sum P(3) = 3.9e-22
Identities = 55/180 (30%), Positives = 95/180 (52%)
Query: 290 YVKEIAC--GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA 347
++K++A GG+H ++ G + ++G G+ GHG+ + RP SL I+V +A
Sbjct: 4041 FIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVA 4100
Query: 348 AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA--R 405
AG H+ C++ G +Y +G ++G+LG + + PKL+E L+ R V+CG+
Sbjct: 4101 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA--LQGHRVVDVACGSGDA 4158
Query: 406 HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAET 464
+ LT+D V SWG YG+LG G S +P + + G + CG ++ L ++
Sbjct: 4159 QTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4218
Score = 228 (85.3 bits), Expect = 3.2e-21, Sum P(2) = 3.2e-21
Identities = 59/182 (32%), Positives = 99/182 (54%)
Query: 289 SYV-KEIAC--GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQ 345
SYV K++A GGRH+ +T G + ++G G G+ GH S + +P +L ++
Sbjct: 3045 SYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRD 3104
Query: 346 IAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGAR 405
IA G H+ ++ G +Y +G ++G+LG G + + PK+++ +L R V+CG+R
Sbjct: 3105 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK--VLLGHRVIQVACGSR 3162
Query: 406 --HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLA 462
+ LT++G V SWG +G+LG G S NIP + ++G I CG +L L
Sbjct: 3163 DAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3222
Query: 463 ET 464
++
Sbjct: 3223 KS 3224
Score = 214 (80.4 bits), Expect = 1.2e-19, Sum P(4) = 1.2e-19
Identities = 54/172 (31%), Positives = 86/172 (50%)
Query: 291 VKEIACGG--RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
V ++ACG + +TD + ++G G YG+ G G ++ P SL + V ++
Sbjct: 4148 VVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 4207
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
G +V ++ G VY +G + +LG G D P+ ++ L+ K+ ++ G+ H
Sbjct: 4208 GSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG--LQGKKVIAIATGSLHCV 4265
Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTL 459
TEDG+V +WG N GQLG G + P LV + G +ACG HTL
Sbjct: 4266 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4317
Score = 209 (78.6 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 60/192 (31%), Positives = 91/192 (47%)
Query: 284 GKAGRSYVKEIA-CGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ 342
G A R+ VK A G H + G + ++G G G+ GHG T P S+ Q
Sbjct: 490 GLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ 549
Query: 343 ----VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAK 398
V IA G ++ I+ EG +Y +G +G+LG G + E +P L+ L+ +
Sbjct: 550 AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAG--LKGLKVI 607
Query: 399 VVSCGARHSAVL--TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGW 455
V+CG+ + L TE+GQV SWG YG+LG G S P L+ + + CG
Sbjct: 608 DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGS 667
Query: 456 WHTLLLAETTQI 467
++ L + Q+
Sbjct: 668 QFSIALTKDGQV 679
Score = 205 (77.2 bits), Expect = 3.9e-19, Sum P(3) = 3.9e-19
Identities = 53/162 (32%), Positives = 84/162 (51%)
Query: 297 GGRHSA-VVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHT 353
GG + VT G L G+G G+ G G T P+ S+ + ++++A +G H
Sbjct: 3995 GGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHC 4054
Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
+ +S EG VY +G + G+LG G + P+++E+ L V+ G HSA +T
Sbjct: 4055 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES--LRGIEVVDVAAGGAHSACVTAA 4112
Query: 414 GQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACG 454
G + +WG +YG+LG DS D+ P LV + G ++ACG
Sbjct: 4113 GDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACG 4154
Score = 199 (75.1 bits), Expect = 5.9e-18, Sum P(2) = 5.9e-18
Identities = 53/172 (30%), Positives = 86/172 (50%)
Query: 291 VKEIACGGR--HSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
V ++ACG R + +TD G + ++G G +G+ G G + P L V QI
Sbjct: 3154 VIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIEC 3213
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
G ++ ++ G V+ +G + +LG G D P+++E L K+ V+ GA H
Sbjct: 3214 GAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG--LRGKKIVHVAVGALHCL 3271
Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTL 459
+T+ GQV +WG N +GQ G G + P+LV + G +ACG H++
Sbjct: 3272 AVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3323
Score = 197 (74.4 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 52/169 (30%), Positives = 85/169 (50%)
Query: 291 VKEIACGG--RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
V ++ACG + VT+ G + ++G G YG+ G G ++ P L D+ V ++
Sbjct: 606 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC 665
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
G ++ ++ +G+VY +G +LG G ++ PKLLE L+ K+ V+ G+ H
Sbjct: 666 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG--LQGKKVIDVAAGSTHCL 723
Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNI---ACG 454
LTED +V SWG N Q D++ P + G ++I ACG
Sbjct: 724 ALTEDSEVHSWGSND--QCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 770
Score = 186 (70.5 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 59/193 (30%), Positives = 94/193 (48%)
Query: 281 NSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG--QCGHGSTNDQLR-PSYASS 337
+ G +G S +++ A G +A + F WGL Q G G +++ PS++ +
Sbjct: 2936 DEKGNSG-SLIRKKAAGLESAATIRTK----VFVWGLNDKDQLG-GLKGSKIKVPSFSET 2989
Query: 338 LMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRA 397
L + V Q+A G ++VEG+VY G G+LG G+ VP + L S
Sbjct: 2990 LSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSG-TVPIPRQITALSSYVV 3048
Query: 398 KVVSC--GARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACG 454
K V+ G RH+ LT DG+V SWG G+LG ++ + P L+ + R+IACG
Sbjct: 3049 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACG 3108
Query: 455 WWHTLLLAETTQI 467
H+ L + ++
Sbjct: 3109 SSHSAALTSSGEL 3121
Score = 180 (68.4 bits), Expect = 5.4e-15, Sum P(3) = 5.4e-15
Identities = 39/121 (32%), Positives = 61/121 (50%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
V +I CG + S +T +G + T+G G Y + GHGS +P L ++ +A G
Sbjct: 3208 VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGA 3267
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
H + ++ G+VY +G N GQ G G P L++ LE ++ V+CG+ HS
Sbjct: 3268 LHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSVAW 3325
Query: 411 T 411
T
Sbjct: 3326 T 3326
Score = 147 (56.8 bits), Expect = 1.1e-12, Sum P(3) = 1.1e-12
Identities = 44/156 (28%), Positives = 79/156 (50%)
Query: 308 GALLTFGWGLY--GQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYV 364
G+ +GWG GQ G G +++ P+ +L ++ Q+ G ++ +G++Y
Sbjct: 3953 GSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA 4011
Query: 365 FGGNQFGQLGTGVDQAENVPKLLETPILESKRAKV-VSCGARHSAVLTEDGQVLSWGWNK 423
G G+LG G ++ + P LLE+ I KV V+ G +H L+ +G+V SWG +
Sbjct: 4012 TGYGAGGRLGIGGTESVSTPTLLES-IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4070
Query: 424 YGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHT 458
G+LG G+ + P ++ + G ++A G H+
Sbjct: 4071 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4106
Score = 121 (47.7 bits), Expect = 3.9e-22, Sum P(3) = 3.9e-22
Identities = 29/77 (37%), Positives = 40/77 (51%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAG 112
VC CG F+LA ++SG + TWG D + S H P+ +V A G
Sbjct: 3208 VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVG 3266
Query: 113 WAHCVSVTEAGEVYTWG 129
HC++VT+AG+VY WG
Sbjct: 3267 ALHCLAVTDAGQVYAWG 3283
Score = 115 (45.5 bits), Expect = 3.2e-21, Sum P(2) = 3.2e-21
Identities = 25/78 (32%), Positives = 43/78 (55%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 659 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 717
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 718 GSTHCLALTEDSEVHSWG 735
Score = 109 (43.4 bits), Expect = 9.7e-20, Sum P(4) = 9.7e-20
Identities = 36/113 (31%), Positives = 53/113 (46%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWK--DV-CGGGCGFALATSESGKLITWGS 77
+Y WG G S IP + G K DV CG G LA +E+G++ +WG
Sbjct: 573 LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGD 632
Query: 78 ADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
D G+ G G +TP+ + VVK G +++T+ G+VY+WG
Sbjct: 633 GD-YGKLG-RGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWG 683
Score = 109 (43.4 bits), Expect = 5.2e-19, Sum P(2) = 5.2e-19
Identities = 30/77 (38%), Positives = 39/77 (50%)
Query: 55 VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT--EASVVKAAAG 112
V GG LA S G++ +WG A+D G+ L G P + + VV AAG
Sbjct: 4047 VNSGG-KHCLALSSEGEVYSWGEAED-GK--LGHGNRSPCDRPRVIESLRGIEVVDVAAG 4102
Query: 113 WAHCVSVTEAGEVYTWG 129
AH VT AG++YTWG
Sbjct: 4103 GAHSACVTAAGDLYTWG 4119
Score = 100 (40.3 bits), Expect = 1.8e-13, Sum P(3) = 1.8e-13
Identities = 28/95 (29%), Positives = 43/95 (45%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 3035 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3093
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ A G +H ++T +GE+YTWG E
Sbjct: 3094 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3128
Score = 98 (39.6 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
Identities = 34/121 (28%), Positives = 60/121 (49%)
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGARHSAV 409
W T+ G +Y +G N GQLG G++ A+ VP E L + R + G +
Sbjct: 3947 W-TLSAGGSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEA--LATLRPVQLIGGEQTLFA 4002
Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI--HGFLPR-NIACGWWHTLLLAETTQ 466
+T DG++ + G+ G+LG+G + + P+L+ H F+ + + G H L L+ +
Sbjct: 4003 VTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 4062
Query: 467 I 467
+
Sbjct: 4063 V 4063
Score = 98 (39.6 bits), Expect = 4.9e-07, Sum P(4) = 4.9e-07
Identities = 25/74 (33%), Positives = 37/74 (50%)
Query: 284 GKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQV 343
G G+ + IA G H T+ G + T+G GQ G G+TN RP ++L +V
Sbjct: 4248 GLQGKKVIA-IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKV 4306
Query: 344 EQIAAGLWHTVCIS 357
++A G HT+ S
Sbjct: 4307 NRVACGSAHTLAWS 4320
Score = 91 (37.1 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 33/113 (29%), Positives = 45/113 (39%)
Query: 22 VYMWG---YLPGTSPEKSPILSPIPARLCGGDSWKDV-CGGGCGFALATSESGKLITWGS 77
+Y WG Y + L P G DV CG G L ++ + +WG
Sbjct: 4115 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGD 4174
Query: 78 ADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
D G+ G G + P T VVK G V++T++G VYTWG
Sbjct: 4175 GD-YGKLG-RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWG 4225
Score = 73 (30.8 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 26/75 (34%), Positives = 39/75 (52%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGET-P--EPFPLPT----EAS--VVKAAAGWA 114
LA + +G++ +WG D G+ G HG+T P EP + +A VV A G
Sbjct: 509 LALAATGEVYSWGCGDG-GRL----G-HGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562
Query: 115 HCVSVTEAGEVYTWG 129
+ ++T GE+YTWG
Sbjct: 563 YSAAITAEGELYTWG 577
Score = 71 (30.1 bits), Expect = 9.6e-15, Sum P(3) = 9.6e-15
Identities = 22/77 (28%), Positives = 33/77 (42%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA--AGWAH 115
GG A + GKL G G+ + + TP + K A +G H
Sbjct: 3995 GGEQTLFAVTADGKLYATGYGAG-GRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKH 4053
Query: 116 CVSVTEAGEVYTWGWRE 132
C++++ GEVY+WG E
Sbjct: 4054 CLALSSEGEVYSWGEAE 4070
Score = 70 (29.7 bits), Expect = 3.3e-16, Sum P(4) = 3.3e-16
Identities = 20/75 (26%), Positives = 33/75 (44%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAAGWA 114
CG LA ++ G + +WG D G+ G G P+ V + G
Sbjct: 3159 CGSRDAQTLALTDEGLVFSWGDGDF-GKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQ 3216
Query: 115 HCVSVTEAGEVYTWG 129
+++T++G V+TWG
Sbjct: 3217 FSLALTKSGVVWTWG 3231
Score = 57 (25.1 bits), Expect = 4.1e-09, Sum P(3) = 4.1e-09
Identities = 21/81 (25%), Positives = 33/81 (40%)
Query: 49 GDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVK 108
G+S + G A + K+ WG +D+ Q G + P + +VV+
Sbjct: 2939 GNSGSLIRKKAAGLESAATIRTKVFVWG-LNDKDQLGGLKGSKIKVPSFSETLSALNVVQ 2997
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
A G +VT G+VY G
Sbjct: 2998 VAGGSKSLFAVTVEGKVYACG 3018
Score = 55 (24.4 bits), Expect = 6.5e-09, Sum P(3) = 6.5e-09
Identities = 22/80 (27%), Positives = 32/80 (40%)
Query: 54 DVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGW 113
DV G LA +E ++ +WGS +D+ Q + T PEP LP
Sbjct: 714 DVAAGST-HCLALTEDSEVHSWGS-NDQCQHFDTL--RVTKPEPAALP--------GLDT 761
Query: 114 AHCVSVTEAGEVYTWGWREC 133
H V + G ++ W C
Sbjct: 762 KHIVGIA-CGPAQSFAWSSC 780
Score = 54 (24.1 bits), Expect = 5.6e-21, Sum P(2) = 5.6e-21
Identities = 18/52 (34%), Positives = 27/52 (51%)
Query: 82 GQSYLTSGKHGETPEPFPLPTEAS--VVKAAA--GWAHCVSVTEAGEVYTWG 129
G+ Y T + +T P + AS +VK AA H +++ GEVY+WG
Sbjct: 471 GRVY-TQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWG 521
Score = 49 (22.3 bits), Expect = 4.2e-14, Sum P(4) = 4.2e-14
Identities = 15/62 (24%), Positives = 26/62 (41%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G LA +++G++ WG +D GQ + P + + A G +H V+
Sbjct: 3266 GALHCLAVTDAGQVYAWGD-NDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324
Query: 119 VT 120
T
Sbjct: 3325 WT 3326
Score = 48 (22.0 bits), Expect = 3.9e-22, Sum P(3) = 3.9e-22
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTL 225
P LV G KIT+VA G H++
Sbjct: 3301 PTLVQGLEGQKITRVACGSSHSV 3323
Score = 45 (20.9 bits), Expect = 3.2e-21, Sum P(3) = 3.2e-21
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
G + P +V G KI VA G H L ++D
Sbjct: 3241 GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3275
Score = 45 (20.9 bits), Expect = 1.2e-19, Sum P(4) = 1.2e-19
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 202 SPC----LVTLNPGVKITKVAAGGRHT 224
SPC ++ G+++ VAAGG H+
Sbjct: 4080 SPCDRPRVIESLRGIEVVDVAAGGAHS 4106
Score = 43 (20.2 bits), Expect = 2.3e-21, Sum P(4) = 2.3e-21
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 166 PPSDKRAGEEVVKRRKTSSARE-ESENPASGDE 197
P +D ++ T + + ES+N ASG E
Sbjct: 3501 PVTDDPGAASIIAETMTKTKEDVESQNKASGPE 3533
Score = 42 (19.8 bits), Expect = 2.3e-21, Sum P(4) = 2.3e-21
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILS 228
+P L+ V I KVA +GG+H L LS
Sbjct: 4030 TPTLLESIQHVFIKKVAVNSGGKHCLALS 4058
Score = 41 (19.5 bits), Expect = 5.4e-15, Sum P(3) = 5.4e-15
Identities = 6/9 (66%), Positives = 6/9 (66%)
Query: 413 DGQVLSWGW 421
DG V WGW
Sbjct: 3697 DGSVNGWGW 3705
Score = 40 (19.1 bits), Expect = 2.1e-07, Sum P(3) = 2.1e-07
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 60 CGFALATSESGKLITWGSADDEGQSYLTSGKHGE 93
C T + T+G ++ GQS + G+ G+
Sbjct: 2733 CETCFKTRKHNTRHTFGRINEPGQSAIFCGRSGK 2766
Score = 39 (18.8 bits), Expect = 9.7e-20, Sum P(4) = 9.7e-20
Identities = 6/9 (66%), Positives = 6/9 (66%)
Query: 123 GEVYTWGWR 131
G V WGWR
Sbjct: 3698 GSVNGWGWR 3706
>TAIR|locus:2076532 [details] [associations]
symbol:AT3G02300 "AT3G02300" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0008536
"Ran GTPase binding" evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415
EMBL:CP002686 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 IPI:IPI00534317
RefSeq:NP_186879.2 UniGene:At.41157 ProteinModelPortal:F4J609
SMR:F4J609 EnsemblPlants:AT3G02300.1 GeneID:821167
KEGG:ath:AT3G02300 OMA:LKELCEF Uniprot:F4J609
Length = 471
Score = 241 (89.9 bits), Expect = 4.1e-22, Sum P(3) = 4.1e-22
Identities = 60/184 (32%), Positives = 95/184 (51%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGS--TND-QLRPSYASSLMDIQVEQIA 347
+ +++CG H+A ++DAG + T+G G GQ GH S + D +L P L + ++++A
Sbjct: 229 IMQLSCGEYHTAALSDAGEVYTWGLGSMGQLGHVSLQSGDKELIPRRVVGLDGVSMKEVA 288
Query: 348 AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA-----ENVPKLL--ETPILESKR-AKV 399
G HT +S+EG +Y +GG Q GQLG G N ++L P+L ++
Sbjct: 289 CGGVHTCALSLEGALYAWGGGQAGQLGLGPQSGFFFSVSNGSEMLLRNVPVLVIPTDVRL 348
Query: 400 VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTL 459
V+CG H+ V +G++ WG+N YGQ S PS V R +A G H+
Sbjct: 349 VACGHSHTLVYMREGRICGWGYNSYGQAANEKSSYAWYPSPVDWCVGQVRKLAAGGGHSA 408
Query: 460 LLAE 463
+L +
Sbjct: 409 VLTD 412
Score = 204 (76.9 bits), Expect = 5.3e-16, Sum P(2) = 5.3e-16
Identities = 61/195 (31%), Positives = 98/195 (50%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR-P----SYASSLMD----I 341
+++++CG H +++ G L +G+ GQ G G T + L+ P +YA L + +
Sbjct: 168 IRQVSCGTAHVVALSEEGLLQAWGYNEQGQLGRGVTCEGLQAPRVINAYAKFLDEAPELV 227
Query: 342 QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI--LESKRAKV 399
++ Q++ G +HT +S G VY +G GQLG V +L+ + L+ K
Sbjct: 228 KIMQLSCGEYHTAALSDAGEVYTWGLGSMGQLGH-VSLQSGDKELIPRRVVGLDGVSMKE 286
Query: 400 VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD------SID-------RNIPSLV-PIHG 445
V+CG H+ L+ +G + +WG + GQLGLG S+ RN+P LV P
Sbjct: 287 VACGGVHTCALSLEGALYAWGGGQAGQLGLGPQSGFFFSVSNGSEMLLRNVPVLVIPTD- 345
Query: 446 FLPRNIACGWWHTLL 460
R +ACG HTL+
Sbjct: 346 --VRLVACGHSHTLV 358
Score = 195 (73.7 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 54/186 (29%), Positives = 90/186 (48%)
Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWH 352
+I+CG H+A V G+L +G YGQ G G+ + P L V+ ++ G +
Sbjct: 65 DISCGREHTAAVASDGSLFAWGANEYGQLGDGTEVGRKHPKKVKQLQSEFVKFVSCGAFC 124
Query: 353 TVCISVEGRVYVFGGNQFGQLGT-GVDQAENVPKLLETPILESKRAKVVSCGARHSAVLT 411
T I+ E R G +L G +Q N+P+L + + VSCG H L+
Sbjct: 125 TAAIA-EPREND-GTLSTSRLWVWGQNQGSNLPRLFSGAFPATTAIRQVSCGTAHVVALS 182
Query: 412 EDGQVLSWGWNKYGQLGLGDSIDR-NIPSLVPIHG-FL---PR-----NIACGWWHTLLL 461
E+G + +WG+N+ GQLG G + + P ++ + FL P ++CG +HT L
Sbjct: 183 EEGLLQAWGYNEQGQLGRGVTCEGLQAPRVINAYAKFLDEAPELVKIMQLSCGEYHTAAL 242
Query: 462 AETTQI 467
++ ++
Sbjct: 243 SDAGEV 248
Score = 162 (62.1 bits), Expect = 8.2e-09, P = 8.2e-09
Identities = 40/130 (30%), Positives = 65/130 (50%)
Query: 341 IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGV-DQAENVPK-----LLETPILES 394
+ + +I + +V I + +YV+G NQ GQ G ++ +PK L P +
Sbjct: 1 MDIGEIIGEVAPSVSIPTKSAIYVWGYNQSGQTGRNEQEKLLRIPKQLPPELFGCPAGAN 60
Query: 395 KRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIAC 453
R +SCG H+A + DG + +WG N+YGQLG G + R P V + + ++C
Sbjct: 61 SRWLDISCGREHTAAVASDGSLFAWGANEYGQLGDGTEVGRKHPKKVKQLQSEFVKFVSC 120
Query: 454 GWWHTLLLAE 463
G + T +AE
Sbjct: 121 GAFCTAAIAE 130
Score = 78 (32.5 bits), Expect = 8.7e-22, Sum P(2) = 8.7e-22
Identities = 25/81 (30%), Positives = 38/81 (46%)
Query: 60 CGFA--LATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPF--------PLPTEASVVK 108
CG A +A SE G L WG +++GQ G + P P +++
Sbjct: 173 CGTAHVVALSEEGLLQAWGY-NEQGQLGRGVTCEGLQAPRVINAYAKFLDEAPELVKIMQ 231
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
+ G H ++++AGEVYTWG
Sbjct: 232 LSCGEYHTAALSDAGEVYTWG 252
Score = 73 (30.8 bits), Expect = 4.1e-22, Sum P(3) = 4.1e-22
Identities = 24/84 (28%), Positives = 36/84 (42%)
Query: 56 CGGGCGFALA-------TSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVK 108
CG C A+A T + +L WG L SG FP T ++ +
Sbjct: 120 CGAFCTAAIAEPRENDGTLSTSRLWVWGQNQGSNLPRLFSGA-------FPATT--AIRQ 170
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRE 132
+ G AH V+++E G + WG+ E
Sbjct: 171 VSCGTAHVVALSEEGLLQAWGYNE 194
Score = 65 (27.9 bits), Expect = 2.7e-21, Sum P(3) = 2.7e-21
Identities = 32/120 (26%), Positives = 51/120 (42%)
Query: 20 TVVYMWGY----LPGTSPEKSPILSP--IPARL--C--GGDS-WKDVCGGGCG--FALAT 66
+ +Y+WGY G + ++ + P +P L C G +S W D+ CG A
Sbjct: 20 SAIYVWGYNQSGQTGRNEQEKLLRIPKQLPPELFGCPAGANSRWLDI---SCGREHTAAV 76
Query: 67 SESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT-EASVVKAAAGWAHCVS-VTEAGE 124
+ G L WG A++ GQ L G P + ++ VK + A C + + E E
Sbjct: 77 ASDGSLFAWG-ANEYGQ--LGDGTEVGRKHPKKVKQLQSEFVKFVSCGAFCTAAIAEPRE 133
Score = 50 (22.7 bits), Expect = 9.5e-20, Sum P(3) = 9.5e-20
Identities = 12/40 (30%), Positives = 18/40 (45%)
Query: 95 PEPFPLPTEASV--VKAAAGWAHCVSVTEAGEVYTWGWRE 132
PE F P A+ + + G H +V G ++ WG E
Sbjct: 50 PELFGCPAGANSRWLDISCGREHTAAVASDGSLFAWGANE 89
Score = 42 (19.8 bits), Expect = 4.1e-22, Sum P(3) = 4.1e-22
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 212 VKITKVAAGGRHTLILSD 229
VKI +++ G HT LSD
Sbjct: 227 VKIMQLSCGEYHTAALSD 244
Score = 39 (18.8 bits), Expect = 1.3e-18, Sum P(3) = 1.3e-18
Identities = 6/19 (31%), Positives = 10/19 (52%)
Query: 114 AHCVSVTEAGEVYTWGWRE 132
A VS+ +Y WG+ +
Sbjct: 11 APSVSIPTKSAIYVWGYNQ 29
>UNIPROTKB|E2RMB0 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:8916 KO:K10614 OMA:SPAVDFR
EMBL:AAEX03016754 EMBL:AAEX03016753 RefSeq:XP_535653.3
Ensembl:ENSCAFT00000015540 GeneID:478475 KEGG:cfa:478475
Uniprot:E2RMB0
Length = 1050
Score = 246 (91.7 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 61/193 (31%), Positives = 93/193 (48%)
Query: 276 RQGSVNSS-GKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR-PS 333
R+G+ G ++ +ACG HS ++D G L ++G G GQ G +T D + P
Sbjct: 70 REGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPR 129
Query: 334 YASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV-PKLLETPIL 392
L + Q++ G WH + ++ +G+ + +G N GQLG G + P+ + + L
Sbjct: 130 LIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEYPSQASPQRVRS--L 187
Query: 393 ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI-HGFLPRNI 451
E V+ G HS L+ G V WG N GQLGL D DR P V + I
Sbjct: 188 EGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYI 247
Query: 452 ACGWWHTLLLAET 464
+CG HT +L ++
Sbjct: 248 SCGEEHTAVLTKS 260
Score = 240 (89.5 bits), Expect = 5.0e-16, Sum P(2) = 5.0e-16
Identities = 58/175 (33%), Positives = 86/175 (49%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
VKE+ACGG HS + + G + T G GQ GH + +P +L D + +A G
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIVHVACGE 93
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGT-GVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
H++ +S G+++ +G GQLG + + VP+L++ L + VSCG H
Sbjct: 94 SHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK--LNQQTILQVSCGNWHCLA 151
Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNI-PSLV-PIHGFLPRNIACGWWHTLLLA 462
L DGQ +WG N +GQLGLG P V + G +A G H+ L+
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEYPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 206
Score = 230 (86.0 bits), Expect = 4.7e-22, Sum P(2) = 4.7e-22
Identities = 59/178 (33%), Positives = 89/178 (50%)
Query: 285 KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN-DQLRPSYASSLMDIQV 343
K + + +++CG H + G T+G +GQ G G Q P SL I +
Sbjct: 133 KLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEYPSQASPQRVRSLEGIPL 192
Query: 344 EQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCG 403
Q+AAG H+ +S+ G V+ +G N GQLG ++ P +L +++ +SCG
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESP--CHVKLLRTQKVVYISCG 250
Query: 404 ARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI-PSLV-PIHGFLPRNIACGWWHTL 459
H+AVLT+ G V ++G GQLG DS++ + P V + G IACG HTL
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTL 307
Score = 189 (71.6 bits), Expect = 1.9e-18, Sum P(2) = 1.9e-18
Identities = 39/84 (46%), Positives = 50/84 (59%)
Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
I+CG H+AV+T +G + TFG G GQ GH S ND++ P LM +V QIA G HT
Sbjct: 247 ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHT 306
Query: 354 VC-ISVEGRVYVFGGNQFGQLGTG 376
+ + G +Y FG GQLGTG
Sbjct: 307 LAFVPSSGLIYAFGCGAKGQLGTG 330
Score = 185 (70.2 bits), Expect = 8.2e-11, P = 8.2e-11
Identities = 55/162 (33%), Positives = 81/162 (50%)
Query: 310 LLTFGWGLYGQCGHGSTNDQ---LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFG 366
+L +G+ GQ G STN Q P + D V+++A G H+V + +G VY G
Sbjct: 1 MLCWGYWSLGQPGI-STNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG 59
Query: 367 GNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQ 426
N GQLG ++ N P+ + L + V+CG HS L++ GQ+ SWG GQ
Sbjct: 60 LNTKGQLGH--EREGNKPEQIGA--LADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQ 115
Query: 427 LGLGDSIDR-NIPSLVP-IHGFLPRNIACGWWHTLLLAETTQ 466
LGL + D +P L+ ++ ++CG WH L LA Q
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQ 157
Score = 116 (45.9 bits), Expect = 1.9e-18, Sum P(2) = 1.9e-18
Identities = 36/171 (21%), Positives = 69/171 (40%)
Query: 60 CG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
CG +LA S+ G+L +WG+ D +T+ P + ++++ + G HC+
Sbjct: 91 CGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCL 150
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV 177
++ G+ +TWG + + +++ S S Q+ +P Q + +
Sbjct: 151 ALAADGQFFTWG-KNSHGQLGLGKEYPSQASPQR--VRSLEGIPLAQVAAGGAHSFALSL 207
Query: 178 KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ DE SPC V L K+ ++ G HT +L+
Sbjct: 208 SGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Score = 106 (42.4 bits), Expect = 4.7e-22, Sum P(2) = 4.7e-22
Identities = 35/111 (31%), Positives = 55/111 (49%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCG--GD-SWKDV-CGGGCGFALATSESGKLITWGSA 78
WGY P S L I A ++CG D S K+V CGG L E G++ T G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLL--EDGEVYTCG-L 60
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ +GQ L + G PE + +V A G +H +++++ G++++WG
Sbjct: 61 NTKGQ--LGHEREGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWG 109
Score = 91 (37.1 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 31/104 (29%), Positives = 44/104 (42%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
G E SP R G V GG + A S SG + WG ++ GQ L+
Sbjct: 170 GLGKEYPSQASPQRVRSLEGIPLAQVAAGGA-HSFALSLSGAVFGWGM-NNAGQLGLSDE 227
Query: 90 KHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
+ E+P L VV + G H +T++G V+T+G C
Sbjct: 228 EDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSC 271
Score = 81 (33.6 bits), Expect = 8.5e-07, Sum P(2) = 8.5e-07
Identities = 20/46 (43%), Positives = 26/46 (56%)
Query: 289 SYVKEIACGGRHS-AVVTDAGALLTFGWGLYGQCGHGSTNDQLRPS 333
S V +IACG +H+ A V +G + FG G GQ G G T + PS
Sbjct: 294 SEVTQIACGRQHTLAFVPSSGLIYAFGCGAKGQLGTGHTCNVKCPS 339
Score = 40 (19.1 bits), Expect = 3.5e-15, Sum P(2) = 3.5e-15
Identities = 9/16 (56%), Positives = 10/16 (62%)
Query: 214 ITKVAAGGRHTLILSD 229
I VA G H+L LSD
Sbjct: 86 IVHVACGESHSLALSD 101
Score = 37 (18.1 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 6/14 (42%), Positives = 10/14 (71%)
Query: 214 ITKVAAGGRHTLIL 227
+ +VA GG H++ L
Sbjct: 36 VKEVACGGNHSVFL 49
>RGD|1307989 [details] [associations]
symbol:Herc2 "HECT and RLD domain containing E3 ubiquitin
protein ligase 2" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IBA] [GO:0005634
"nucleus" evidence=ISO;IBA] [GO:0005737 "cytoplasm"
evidence=ISO;IBA] [GO:0005743 "mitochondrial inner membrane"
evidence=ISO] [GO:0006281 "DNA repair" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=ISO] [GO:0007283
"spermatogenesis" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0020037 "heme binding" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=ISO] [GO:0032183 "SUMO binding"
evidence=ISO] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
RGD:1307989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0020037
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
GO:GO:0042787 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204 InterPro:IPR006624
SMART:SM00706 IPI:IPI00476523 Ensembl:ENSRNOT00000019318
UCSC:RGD:1307989 ArrayExpress:F1M716 Uniprot:F1M716
Length = 3607
Score = 229 (85.7 bits), Expect = 5.4e-22, Sum P(3) = 5.4e-22
Identities = 54/180 (30%), Positives = 95/180 (52%)
Query: 290 YVKEIAC--GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA 347
++K++A GG+H ++ G + ++G G+ GHG+ + RP SL I+V +A
Sbjct: 2812 FIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVA 2871
Query: 348 AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA--R 405
AG H+ C++ G +Y +G ++G+LG + + PKL+E L+ R ++CG+
Sbjct: 2872 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA--LQGHRVIDIACGSGDA 2929
Query: 406 HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAET 464
+ LT+D V SWG YG+LG G S +P + + G + CG ++ L ++
Sbjct: 2930 QTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 2989
Score = 228 (85.3 bits), Expect = 3.0e-15, Sum P(2) = 3.0e-15
Identities = 59/182 (32%), Positives = 99/182 (54%)
Query: 289 SYV-KEIAC--GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQ 345
SYV K++A GGRH+ +T G + ++G G G+ GH S + +P +L ++
Sbjct: 1853 SYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRD 1912
Query: 346 IAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGAR 405
IA G H+ ++ G +Y +G ++G+LG G + + PK+++ +L R V+CG+R
Sbjct: 1913 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK--VLLGHRVIQVACGSR 1970
Query: 406 --HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLA 462
+ LT++G V SWG +G+LG G S NIP + ++G I CG +L L
Sbjct: 1971 DAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 2030
Query: 463 ET 464
++
Sbjct: 2031 KS 2032
Score = 214 (80.4 bits), Expect = 2.9e-20, Sum P(3) = 2.9e-20
Identities = 55/172 (31%), Positives = 86/172 (50%)
Query: 291 VKEIACGG--RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
V +IACG + +TD + ++G G YG+ G G ++ P SL + V ++
Sbjct: 2919 VIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 2978
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
G +V ++ G VY +G + +LG G D P+ ++ L+ K+ ++ G+ H
Sbjct: 2979 GSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG--LQGKKVIAIATGSLHCV 3036
Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTL 459
TEDG+V +WG N GQLG G + P LV + G +ACG HTL
Sbjct: 3037 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 3088
Score = 206 (77.6 bits), Expect = 2.4e-19, Sum P(3) = 2.4e-19
Identities = 54/162 (33%), Positives = 84/162 (51%)
Query: 297 GGRHSA-VVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHT 353
GG + VT G L G+G G+ G G T P+ S+ + ++++A +G H
Sbjct: 2766 GGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHC 2825
Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
+ +S EG VY +G + G+LG G + P+++E+ L V+ G HSA +T
Sbjct: 2826 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES--LRGIEVVDVAAGGAHSACVTAA 2883
Query: 414 GQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACG 454
G + +WG +YG+LG DS D+ P LV + G +IACG
Sbjct: 2884 GDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACG 2925
Score = 201 (75.8 bits), Expect = 6.9e-17, Sum P(2) = 6.9e-17
Identities = 53/172 (30%), Positives = 86/172 (50%)
Query: 291 VKEIACGGR--HSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
V ++ACG R + +TD G + ++G G +G+ G G + P L V QI
Sbjct: 1962 VIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIEC 2021
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
G ++ ++ G V+ +G + +LG G D P+++E L K+ V+ GA H
Sbjct: 2022 GAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG--LRGKKIVHVAVGALHCL 2079
Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTL 459
+T+ GQV +WG N +GQ G G + P+LV + G +ACG H++
Sbjct: 2080 AVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 2131
Score = 181 (68.8 bits), Expect = 5.7e-14, Sum P(3) = 5.7e-14
Identities = 39/121 (32%), Positives = 61/121 (50%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
V +I CG + S +T +G + T+G G Y + GHGS +P L ++ +A G
Sbjct: 2016 VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGA 2075
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
H + ++ G+VY +G N GQ G G P L++ LE ++ V+CG+ HS
Sbjct: 2076 LHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSVAW 2133
Query: 411 T 411
T
Sbjct: 2134 T 2134
Score = 178 (67.7 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 53/161 (32%), Positives = 81/161 (50%)
Query: 313 FGWGLYG--QCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQ 369
F WGL Q G G +++ PS++ +L + V Q+A G ++VEG+VY G
Sbjct: 1771 FVWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEAT 1829
Query: 370 FGQLGTGVDQAENVPKLLETPILESKRAKVVSC--GARHSAVLTEDGQVLSWGWNKYGQL 427
G+LG G+ VP + L S K V+ G RH+ LT DG+V SWG G+L
Sbjct: 1830 NGRLGLGMSSG-TVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 1888
Query: 428 GLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
G ++ + P L+ + R+IACG H+ L + ++
Sbjct: 1889 GHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGEL 1929
Score = 147 (56.8 bits), Expect = 9.1e-13, Sum P(3) = 9.1e-13
Identities = 44/156 (28%), Positives = 79/156 (50%)
Query: 308 GALLTFGWGLY--GQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYV 364
G+ +GWG GQ G G +++ P+ +L ++ Q+ G ++ +G++Y
Sbjct: 2724 GSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA 2782
Query: 365 FGGNQFGQLGTGVDQAENVPKLLETPILESKRAKV-VSCGARHSAVLTEDGQVLSWGWNK 423
G G+LG G ++ + P LLE+ I KV V+ G +H L+ +G+V SWG +
Sbjct: 2783 TGYGAGGRLGIGGTESVSTPTLLES-IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 2841
Query: 424 YGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHT 458
G+LG G+ + P ++ + G ++A G H+
Sbjct: 2842 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 2877
Score = 118 (46.6 bits), Expect = 5.4e-22, Sum P(3) = 5.4e-22
Identities = 28/77 (36%), Positives = 40/77 (51%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAG 112
VC CG F+LA ++SG + TWG D + S H P+ +V A G
Sbjct: 2016 VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVG 2074
Query: 113 WAHCVSVTEAGEVYTWG 129
HC++VT++G+VY WG
Sbjct: 2075 ALHCLAVTDSGQVYAWG 2091
Score = 109 (43.4 bits), Expect = 2.8e-19, Sum P(2) = 2.8e-19
Identities = 30/77 (38%), Positives = 39/77 (50%)
Query: 55 VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT--EASVVKAAAG 112
V GG LA S G++ +WG A+D G+ L G P + + VV AAG
Sbjct: 2818 VNSGG-KHCLALSSEGEVYSWGEAED-GK--LGHGNRSPCDRPRVIESLRGIEVVDVAAG 2873
Query: 113 WAHCVSVTEAGEVYTWG 129
AH VT AG++YTWG
Sbjct: 2874 GAHSACVTAAGDLYTWG 2890
Score = 100 (40.3 bits), Expect = 7.8e-20, Sum P(3) = 7.8e-20
Identities = 28/95 (29%), Positives = 43/95 (45%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 1843 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 1901
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ A G +H ++T +GE+YTWG E
Sbjct: 1902 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE 1936
Score = 98 (39.6 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 25/74 (33%), Positives = 37/74 (50%)
Query: 284 GKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQV 343
G G+ + IA G H T+ G + T+G GQ G G+TN RP ++L +V
Sbjct: 3019 GLQGKKVIA-IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKV 3077
Query: 344 EQIAAGLWHTVCIS 357
++A G HT+ S
Sbjct: 3078 NRVACGSAHTLAWS 3091
Score = 98 (39.6 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 34/121 (28%), Positives = 60/121 (49%)
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGARHSAV 409
W T+ G +Y +G N GQLG G++ A+ VP E L + R + G +
Sbjct: 2718 W-TLSAGGSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEA--LATLRPVQLIGGEQTLFA 2773
Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI--HGFLPR-NIACGWWHTLLLAETTQ 466
+T DG++ + G+ G+LG+G + + P+L+ H F+ + + G H L L+ +
Sbjct: 2774 VTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 2833
Query: 467 I 467
+
Sbjct: 2834 V 2834
Score = 89 (36.4 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 32/113 (28%), Positives = 45/113 (39%)
Query: 22 VYMWG---YLPGTSPEKSPILSPIPARLCGGDSWKDV-CGGGCGFALATSESGKLITWGS 77
+Y WG Y + L P G D+ CG G L ++ + +WG
Sbjct: 2886 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGD 2945
Query: 78 ADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
D G+ G G + P T VVK G V++T++G VYTWG
Sbjct: 2946 GD-YGKLG-RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWG 2996
Score = 71 (30.1 bits), Expect = 3.9e-15, Sum P(3) = 3.9e-15
Identities = 22/77 (28%), Positives = 33/77 (42%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA--AGWAH 115
GG A + GKL G G+ + + TP + K A +G H
Sbjct: 2766 GGEQTLFAVTADGKLYATGYGAG-GRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKH 2824
Query: 116 CVSVTEAGEVYTWGWRE 132
C++++ GEVY+WG E
Sbjct: 2825 CLALSSEGEVYSWGEAE 2841
Score = 70 (29.7 bits), Expect = 4.5e-17, Sum P(3) = 4.5e-17
Identities = 20/75 (26%), Positives = 33/75 (44%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAAGWA 114
CG LA ++ G + +WG D G+ G G P+ V + G
Sbjct: 1967 CGSRDAQTLALTDEGLVFSWGDGDF-GKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQ 2024
Query: 115 HCVSVTEAGEVYTWG 129
+++T++G V+TWG
Sbjct: 2025 FSLALTKSGVVWTWG 2039
Score = 55 (24.4 bits), Expect = 3.0e-15, Sum P(2) = 3.0e-15
Identities = 17/59 (28%), Positives = 27/59 (45%)
Query: 71 KLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
K+ WG +D+ Q G + P + +VV+ A G +VT G+VY+ G
Sbjct: 1769 KVFVWG-LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCG 1826
Score = 52 (23.4 bits), Expect = 2.8e-14, Sum P(4) = 2.8e-14
Identities = 16/62 (25%), Positives = 26/62 (41%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G LA ++SG++ WG +D GQ + P + + A G +H V+
Sbjct: 2074 GALHCLAVTDSGQVYAWGD-NDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 2132
Query: 119 VT 120
T
Sbjct: 2133 WT 2134
Score = 48 (22.0 bits), Expect = 5.4e-22, Sum P(3) = 5.4e-22
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTL 225
P LV G KIT+VA G H++
Sbjct: 2109 PTLVQGLEGQKITRVACGSSHSV 2131
Score = 45 (20.9 bits), Expect = 6.0e-20, Sum P(3) = 6.0e-20
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 202 SPC----LVTLNPGVKITKVAAGGRHT 224
SPC ++ G+++ VAAGG H+
Sbjct: 2851 SPCDRPRVIESLRGIEVVDVAAGGAHS 2877
Score = 45 (20.9 bits), Expect = 7.8e-20, Sum P(3) = 7.8e-20
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
G + P +V G KI VA G H L ++D
Sbjct: 2049 GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 2083
Score = 42 (19.8 bits), Expect = 2.2e-21, Sum P(3) = 2.2e-21
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILS 228
+P L+ V I KVA +GG+H L LS
Sbjct: 2801 TPTLLESIQHVFIKKVAVNSGGKHCLALS 2829
Score = 41 (19.5 bits), Expect = 5.7e-14, Sum P(3) = 5.7e-14
Identities = 6/9 (66%), Positives = 6/9 (66%)
Query: 413 DGQVLSWGW 421
DG V WGW
Sbjct: 2468 DGSVNGWGW 2476
Score = 40 (19.1 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 60 CGFALATSESGKLITWGSADDEGQSYLTSGKHGE 93
C T + T+G ++ GQS + G+ G+
Sbjct: 1541 CETCFKTKKHNTRHTFGRINEPGQSAVFCGRSGK 1574
Score = 39 (18.8 bits), Expect = 2.8e-14, Sum P(4) = 2.8e-14
Identities = 6/9 (66%), Positives = 6/9 (66%)
Query: 123 GEVYTWGWR 131
G V WGWR
Sbjct: 2469 GSVNGWGWR 2477
>TAIR|locus:2165770 [details] [associations]
symbol:AT5G42140 "AT5G42140" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005576
"extracellular region" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=ISS] [GO:0008536 "Ran GTPase binding" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007165 "signal
transduction" evidence=ISS] [GO:0035091 "phosphatidylinositol
binding" evidence=ISS] InterPro:IPR000306 Pfam:PF01363
SMART:SM00064 INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0046872 EMBL:AB017067 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.30.40.10 InterPro:IPR017455
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 InterPro:IPR013591 Pfam:PF08381 PROSITE:PS51514
HSSP:Q15075 ProtClustDB:CLSN2686442 IPI:IPI00533393
RefSeq:NP_199029.1 UniGene:At.28039 ProteinModelPortal:Q9FHX1
SMR:Q9FHX1 PRIDE:Q9FHX1 EnsemblPlants:AT5G42140.1 GeneID:834219
KEGG:ath:AT5G42140 TAIR:At5g42140 HOGENOM:HOG000240974
InParanoid:Q9FHX1 OMA:RNEVFTW PhylomeDB:Q9FHX1
Genevestigator:Q9FHX1 Uniprot:Q9FHX1
Length = 1073
Score = 265 (98.3 bits), Expect = 4.7e-19, Sum P(2) = 4.7e-19
Identities = 60/176 (34%), Positives = 91/176 (51%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
V IACG +H+A+V+ G + T+G G+ GHG D P SL ++ +A G
Sbjct: 274 VHHIACGVKHAALVSRQGEVFTWGEASGGRLGHGMGKDVTGPQLIESLAATSIDFVACGE 333
Query: 351 WHTVCISVEGRVYVFGG--NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
+HT +++ G +Y +G + G LG G D + +PK + P LE + VSCG H+A
Sbjct: 334 FHTCAVTMTGEIYTWGDGTHNAGLLGHGTDVSHWIPKRISGP-LEGLQIASVSCGPWHTA 392
Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
++T GQ+ ++G +G LG GD P V + G +ACG WH + E
Sbjct: 393 LITSTGQLFTFGDGTFGVLGHGDKETVFYPREVESLSGLRTIAVACGVWHAAAIVE 448
Score = 236 (88.1 bits), Expect = 5.4e-22, Sum P(2) = 5.4e-22
Identities = 56/156 (35%), Positives = 85/156 (54%)
Query: 300 HSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVE 359
HS+ +G L T+G G + GHG +L+P+ S+L+D ++A G TV ++
Sbjct: 453 HSSSSVSSGKLFTWGDGDKSRLGHGDKEPRLKPTCVSALIDHTFHRVACGHSLTVGLTTS 512
Query: 360 GRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSW 419
G+VY G +GQLG + +P L+E + + + ++CGA H AVLT +V +W
Sbjct: 513 GKVYTMGSTVYGQLGNPNADGK-LPCLVEDKLTKDC-VEEIACGAYHVAVLTSRNEVFTW 570
Query: 420 GWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACG 454
G G+LG GD DR P+LV + +NIACG
Sbjct: 571 GKGANGRLGHGDVEDRKAPTLVDALKERHVKNIACG 606
Score = 211 (79.3 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 64/221 (28%), Positives = 103/221 (46%)
Query: 264 HAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALL-TFGWG------ 316
H AS D P ++ +G+ A R V + H + D AL + WG
Sbjct: 187 HVAS--DSPNMLVRGT---GSDAFRVSVSSVQSSSSHGSAPDDCDALGDVYIWGEVLCEN 241
Query: 317 --LYG---QCGH-GSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQF 370
+G G+ GS +D L P S + + V IA G+ H +S +G V+ +G
Sbjct: 242 VTKFGADKNIGYLGSRSDVLIPKPLESNVVLDVHHIACGVKHAALVSRQGEVFTWGEASG 301
Query: 371 GQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKY--GQLG 428
G+LG G+ + P+L+E+ L + V+CG H+ +T G++ +WG + G LG
Sbjct: 302 GRLGHGMGKDVTGPQLIES--LAATSIDFVACGEFHTCAVTMTGEIYTWGDGTHNAGLLG 359
Query: 429 LGDSIDRNIPSLV--PIHGFLPRNIACGWWHTLLLAETTQI 467
G + IP + P+ G +++CG WHT L+ T Q+
Sbjct: 360 HGTDVSHWIPKRISGPLEGLQIASVSCGPWHTALITSTGQL 400
Score = 204 (76.9 bits), Expect = 2.4e-18, Sum P(2) = 2.4e-18
Identities = 56/198 (28%), Positives = 90/198 (45%)
Query: 283 SGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ 342
SG + ++CG H+A++T G L TFG G +G GHG P SL ++
Sbjct: 373 SGPLEGLQIASVSCGPWHTALITSTGQLFTFGDGTFGVLGHGDKETVFYPREVESLSGLR 432
Query: 343 VEQIAAGLWHTVCI----------SVE-GRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
+A G+WH I SV G+++ +G +LG G D+ + + +
Sbjct: 433 TIAVACGVWHAAAIVEVIVTHSSSSVSSGKLFTWGDGDKSRLGHG-DKEPRLKPTCVSAL 491
Query: 392 LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP--IHGFLPR 449
++ +V +CG + LT G+V + G YGQLG + D +P LV +
Sbjct: 492 IDHTFHRV-ACGHSLTVGLTTSGKVYTMGSTVYGQLG-NPNADGKLPCLVEDKLTKDCVE 549
Query: 450 NIACGWWHTLLLAETTQI 467
IACG +H +L ++
Sbjct: 550 EIACGAYHVAVLTSRNEV 567
Score = 141 (54.7 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 32/117 (27%), Positives = 59/117 (50%)
Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
+ACG + +T +G + T G +YGQ G+ + + +L L VE+IA G +H
Sbjct: 499 VACGHSLTVGLTTSGKVYTMGSTVYGQLGNPNADGKLPCLVEDKLTKDCVEEIACGAYHV 558
Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
++ V+ +G G+LG G + P L++ L+ + K ++CG+ +A +
Sbjct: 559 AVLTSRNEVFTWGKGANGRLGHGDVEDRKAPTLVDA--LKERHVKNIACGSNFTAAI 613
Score = 125 (49.1 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 27/72 (37%), Positives = 38/72 (52%)
Query: 285 KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVE 344
K + V+EIACG H AV+T + T+G G G+ GHG D+ P+ +L + V+
Sbjct: 542 KLTKDCVEEIACGAYHVAVLTSRNEVFTWGKGANGRLGHGDVEDRKAPTLVDALKERHVK 601
Query: 345 QIAAGLWHTVCI 356
IA G T I
Sbjct: 602 NIACGSNFTAAI 613
Score = 99 (39.9 bits), Expect = 5.4e-22, Sum P(2) = 5.4e-22
Identities = 35/106 (33%), Positives = 46/106 (43%)
Query: 26 GYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQ 83
GYL G+ +S +L P P + DV CG A S G++ TWG A G+
Sbjct: 252 GYL-GS---RSDVLIPKPLE---SNVVLDVHHIACGVKHAALVSRQGEVFTWGEASG-GR 303
Query: 84 SYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
GK P+ S+ A G H +VT GE+YTWG
Sbjct: 304 LGHGMGKDVTGPQLIESLAATSIDFVACGEFHTCAVTMTGEIYTWG 349
Score = 76 (31.8 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 27/67 (40%), Positives = 35/67 (52%)
Query: 69 SGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVV------KAAAGWAHCVSVTEA 122
SGKL TWG D +S L G HG+ EP PT S + + A G + V +T +
Sbjct: 460 SGKLFTWGDGD---KSRL--G-HGDK-EPRLKPTCVSALIDHTFHRVACGHSLTVGLTTS 512
Query: 123 GEVYTWG 129
G+VYT G
Sbjct: 513 GKVYTMG 519
Score = 69 (29.3 bits), Expect = 7.3e-19, Sum P(2) = 7.3e-19
Identities = 17/50 (34%), Positives = 21/50 (42%)
Query: 80 DEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
D+ YL S P+P V A G H V+ GEV+TWG
Sbjct: 248 DKNIGYLGSRSDVLIPKPLESNVVLDVHHIACGVKHAALVSRQGEVFTWG 297
Score = 58 (25.5 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 33/130 (25%), Positives = 54/130 (41%)
Query: 22 VYMWG---YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG---FALATSESGKLITW 75
+Y WG + G + + IP R+ G + CG AL TS +G+L T+
Sbjct: 345 IYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQIASVSCGPWHTALITS-TGQLFTF 403
Query: 76 GSADDEGQSYLTSGKHGETPEPF-PLPTEA----SVVKAAAGWAHCVSVTE--------- 121
G +G ++ G HG+ F P E+ + A G H ++ E
Sbjct: 404 G----DG-TFGVLG-HGDKETVFYPREVESLSGLRTIAVACGVWHAAAIVEVIVTHSSSS 457
Query: 122 --AGEVYTWG 129
+G+++TWG
Sbjct: 458 VSSGKLFTWG 467
Score = 38 (18.4 bits), Expect = 4.7e-19, Sum P(2) = 4.7e-19
Identities = 11/28 (39%), Positives = 12/28 (42%)
Query: 123 GEVYTWGWRECVPSAKVTRD--FGSAGS 148
G+VY WG C K D G GS
Sbjct: 229 GDVYIWGEVLCENVTKFGADKNIGYLGS 256
>UNIPROTKB|F1M560 [details] [associations]
symbol:Herc2 "Protein Herc2" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
RGD:1307989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0046872
GO:GO:0008270 GO:GO:0020037 GO:GO:0005622 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.10.120.10
SUPFAM:SSF55856 InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939
Pfam:PF03256 PROSITE:PS51284 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204 InterPro:IPR006624
SMART:SM00706 IPI:IPI00779702 Ensembl:ENSRNOT00000055965
ArrayExpress:F1M560 Uniprot:F1M560
Length = 3643
Score = 229 (85.7 bits), Expect = 5.5e-22, Sum P(3) = 5.5e-22
Identities = 54/180 (30%), Positives = 95/180 (52%)
Query: 290 YVKEIAC--GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA 347
++K++A GG+H ++ G + ++G G+ GHG+ + RP SL I+V +A
Sbjct: 2848 FIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVA 2907
Query: 348 AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA--R 405
AG H+ C++ G +Y +G ++G+LG + + PKL+E L+ R ++CG+
Sbjct: 2908 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA--LQGHRVIDIACGSGDA 2965
Query: 406 HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAET 464
+ LT+D V SWG YG+LG G S +P + + G + CG ++ L ++
Sbjct: 2966 QTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 3025
Score = 228 (85.3 bits), Expect = 3.1e-15, Sum P(2) = 3.1e-15
Identities = 59/182 (32%), Positives = 99/182 (54%)
Query: 289 SYV-KEIAC--GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQ 345
SYV K++A GGRH+ +T G + ++G G G+ GH S + +P +L ++
Sbjct: 1853 SYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRD 1912
Query: 346 IAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGAR 405
IA G H+ ++ G +Y +G ++G+LG G + + PK+++ +L R V+CG+R
Sbjct: 1913 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK--VLLGHRVIQVACGSR 1970
Query: 406 --HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLA 462
+ LT++G V SWG +G+LG G S NIP + ++G I CG +L L
Sbjct: 1971 DAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 2030
Query: 463 ET 464
++
Sbjct: 2031 KS 2032
Score = 214 (80.4 bits), Expect = 3.0e-20, Sum P(3) = 3.0e-20
Identities = 55/172 (31%), Positives = 86/172 (50%)
Query: 291 VKEIACGG--RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
V +IACG + +TD + ++G G YG+ G G ++ P SL + V ++
Sbjct: 2955 VIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 3014
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
G +V ++ G VY +G + +LG G D P+ ++ L+ K+ ++ G+ H
Sbjct: 3015 GSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG--LQGKKVIAIATGSLHCV 3072
Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTL 459
TEDG+V +WG N GQLG G + P LV + G +ACG HTL
Sbjct: 3073 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 3124
Score = 206 (77.6 bits), Expect = 2.5e-19, Sum P(3) = 2.5e-19
Identities = 54/162 (33%), Positives = 84/162 (51%)
Query: 297 GGRHSA-VVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHT 353
GG + VT G L G+G G+ G G T P+ S+ + ++++A +G H
Sbjct: 2802 GGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHC 2861
Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
+ +S EG VY +G + G+LG G + P+++E+ L V+ G HSA +T
Sbjct: 2862 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES--LRGIEVVDVAAGGAHSACVTAA 2919
Query: 414 GQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACG 454
G + +WG +YG+LG DS D+ P LV + G +IACG
Sbjct: 2920 GDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACG 2961
Score = 201 (75.8 bits), Expect = 7.0e-17, Sum P(2) = 7.0e-17
Identities = 53/172 (30%), Positives = 86/172 (50%)
Query: 291 VKEIACGGR--HSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
V ++ACG R + +TD G + ++G G +G+ G G + P L V QI
Sbjct: 1962 VIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIEC 2021
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
G ++ ++ G V+ +G + +LG G D P+++E L K+ V+ GA H
Sbjct: 2022 GAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG--LRGKKIVHVAVGALHCL 2079
Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTL 459
+T+ GQV +WG N +GQ G G + P+LV + G +ACG H++
Sbjct: 2080 AVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 2131
Score = 181 (68.8 bits), Expect = 5.9e-14, Sum P(3) = 5.9e-14
Identities = 39/121 (32%), Positives = 61/121 (50%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
V +I CG + S +T +G + T+G G Y + GHGS +P L ++ +A G
Sbjct: 2016 VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGA 2075
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
H + ++ G+VY +G N GQ G G P L++ LE ++ V+CG+ HS
Sbjct: 2076 LHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSVAW 2133
Query: 411 T 411
T
Sbjct: 2134 T 2134
Score = 178 (67.7 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 53/161 (32%), Positives = 81/161 (50%)
Query: 313 FGWGLYG--QCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQ 369
F WGL Q G G +++ PS++ +L + V Q+A G ++VEG+VY G
Sbjct: 1771 FVWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEAT 1829
Query: 370 FGQLGTGVDQAENVPKLLETPILESKRAKVVSC--GARHSAVLTEDGQVLSWGWNKYGQL 427
G+LG G+ VP + L S K V+ G RH+ LT DG+V SWG G+L
Sbjct: 1830 NGRLGLGMSSG-TVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 1888
Query: 428 GLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
G ++ + P L+ + R+IACG H+ L + ++
Sbjct: 1889 GHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGEL 1929
Score = 147 (56.8 bits), Expect = 9.3e-13, Sum P(3) = 9.3e-13
Identities = 44/156 (28%), Positives = 79/156 (50%)
Query: 308 GALLTFGWGLY--GQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYV 364
G+ +GWG GQ G G +++ P+ +L ++ Q+ G ++ +G++Y
Sbjct: 2760 GSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA 2818
Query: 365 FGGNQFGQLGTGVDQAENVPKLLETPILESKRAKV-VSCGARHSAVLTEDGQVLSWGWNK 423
G G+LG G ++ + P LLE+ I KV V+ G +H L+ +G+V SWG +
Sbjct: 2819 TGYGAGGRLGIGGTESVSTPTLLES-IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 2877
Query: 424 YGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHT 458
G+LG G+ + P ++ + G ++A G H+
Sbjct: 2878 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 2913
Score = 118 (46.6 bits), Expect = 5.5e-22, Sum P(3) = 5.5e-22
Identities = 28/77 (36%), Positives = 40/77 (51%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAG 112
VC CG F+LA ++SG + TWG D + S H P+ +V A G
Sbjct: 2016 VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVG 2074
Query: 113 WAHCVSVTEAGEVYTWG 129
HC++VT++G+VY WG
Sbjct: 2075 ALHCLAVTDSGQVYAWG 2091
Score = 109 (43.4 bits), Expect = 2.8e-19, Sum P(2) = 2.8e-19
Identities = 30/77 (38%), Positives = 39/77 (50%)
Query: 55 VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT--EASVVKAAAG 112
V GG LA S G++ +WG A+D G+ L G P + + VV AAG
Sbjct: 2854 VNSGG-KHCLALSSEGEVYSWGEAED-GK--LGHGNRSPCDRPRVIESLRGIEVVDVAAG 2909
Query: 113 WAHCVSVTEAGEVYTWG 129
AH VT AG++YTWG
Sbjct: 2910 GAHSACVTAAGDLYTWG 2926
Score = 100 (40.3 bits), Expect = 8.0e-20, Sum P(3) = 8.0e-20
Identities = 28/95 (29%), Positives = 43/95 (45%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 1843 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 1901
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ A G +H ++T +GE+YTWG E
Sbjct: 1902 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE 1936
Score = 98 (39.6 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 25/74 (33%), Positives = 37/74 (50%)
Query: 284 GKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQV 343
G G+ + IA G H T+ G + T+G GQ G G+TN RP ++L +V
Sbjct: 3055 GLQGKKVIA-IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKV 3113
Query: 344 EQIAAGLWHTVCIS 357
++A G HT+ S
Sbjct: 3114 NRVACGSAHTLAWS 3127
Score = 98 (39.6 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 34/121 (28%), Positives = 60/121 (49%)
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGARHSAV 409
W T+ G +Y +G N GQLG G++ A+ VP E L + R + G +
Sbjct: 2754 W-TLSAGGSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEA--LATLRPVQLIGGEQTLFA 2809
Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI--HGFLPR-NIACGWWHTLLLAETTQ 466
+T DG++ + G+ G+LG+G + + P+L+ H F+ + + G H L L+ +
Sbjct: 2810 VTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 2869
Query: 467 I 467
+
Sbjct: 2870 V 2870
Score = 89 (36.4 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 32/113 (28%), Positives = 45/113 (39%)
Query: 22 VYMWG---YLPGTSPEKSPILSPIPARLCGGDSWKDV-CGGGCGFALATSESGKLITWGS 77
+Y WG Y + L P G D+ CG G L ++ + +WG
Sbjct: 2922 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGD 2981
Query: 78 ADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
D G+ G G + P T VVK G V++T++G VYTWG
Sbjct: 2982 GD-YGKLG-RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWG 3032
Score = 71 (30.1 bits), Expect = 4.0e-15, Sum P(3) = 4.0e-15
Identities = 22/77 (28%), Positives = 33/77 (42%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA--AGWAH 115
GG A + GKL G G+ + + TP + K A +G H
Sbjct: 2802 GGEQTLFAVTADGKLYATGYGAG-GRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKH 2860
Query: 116 CVSVTEAGEVYTWGWRE 132
C++++ GEVY+WG E
Sbjct: 2861 CLALSSEGEVYSWGEAE 2877
Score = 70 (29.7 bits), Expect = 4.7e-17, Sum P(3) = 4.7e-17
Identities = 20/75 (26%), Positives = 33/75 (44%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAAGWA 114
CG LA ++ G + +WG D G+ G G P+ V + G
Sbjct: 1967 CGSRDAQTLALTDEGLVFSWGDGDF-GKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQ 2024
Query: 115 HCVSVTEAGEVYTWG 129
+++T++G V+TWG
Sbjct: 2025 FSLALTKSGVVWTWG 2039
Score = 55 (24.4 bits), Expect = 3.1e-15, Sum P(2) = 3.1e-15
Identities = 17/59 (28%), Positives = 27/59 (45%)
Query: 71 KLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
K+ WG +D+ Q G + P + +VV+ A G +VT G+VY+ G
Sbjct: 1769 KVFVWG-LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCG 1826
Score = 52 (23.4 bits), Expect = 2.9e-14, Sum P(4) = 2.9e-14
Identities = 16/62 (25%), Positives = 26/62 (41%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G LA ++SG++ WG +D GQ + P + + A G +H V+
Sbjct: 2074 GALHCLAVTDSGQVYAWGD-NDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 2132
Query: 119 VT 120
T
Sbjct: 2133 WT 2134
Score = 48 (22.0 bits), Expect = 5.5e-22, Sum P(3) = 5.5e-22
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTL 225
P LV G KIT+VA G H++
Sbjct: 2109 PTLVQGLEGQKITRVACGSSHSV 2131
Score = 45 (20.9 bits), Expect = 6.1e-20, Sum P(3) = 6.1e-20
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 202 SPC----LVTLNPGVKITKVAAGGRHT 224
SPC ++ G+++ VAAGG H+
Sbjct: 2887 SPCDRPRVIESLRGIEVVDVAAGGAHS 2913
Score = 45 (20.9 bits), Expect = 8.0e-20, Sum P(3) = 8.0e-20
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
G + P +V G KI VA G H L ++D
Sbjct: 2049 GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 2083
Score = 42 (19.8 bits), Expect = 2.3e-21, Sum P(3) = 2.3e-21
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILS 228
+P L+ V I KVA +GG+H L LS
Sbjct: 2837 TPTLLESIQHVFIKKVAVNSGGKHCLALS 2865
Score = 41 (19.5 bits), Expect = 5.9e-14, Sum P(3) = 5.9e-14
Identities = 6/9 (66%), Positives = 6/9 (66%)
Query: 413 DGQVLSWGW 421
DG V WGW
Sbjct: 2504 DGSVNGWGW 2512
Score = 40 (19.1 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 60 CGFALATSESGKLITWGSADDEGQSYLTSGKHGE 93
C T + T+G ++ GQS + G+ G+
Sbjct: 1541 CETCFKTKKHNTRHTFGRINEPGQSAVFCGRSGK 1574
Score = 39 (18.8 bits), Expect = 2.9e-14, Sum P(4) = 2.9e-14
Identities = 6/9 (66%), Positives = 6/9 (66%)
Query: 123 GEVYTWGWR 131
G V WGWR
Sbjct: 2505 GSVNGWGWR 2513
>UNIPROTKB|F1RW66 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:8916 KO:K10614 OMA:SPAVDFR
EMBL:FP015981 EMBL:CU915521 RefSeq:XP_003129374.3 UniGene:Ssc.42366
Ensembl:ENSSSCT00000010082 GeneID:100517903 KEGG:ssc:100517903
Uniprot:F1RW66
Length = 1050
Score = 244 (91.0 bits), Expect = 2.3e-17, P = 2.3e-17
Identities = 60/193 (31%), Positives = 95/193 (49%)
Query: 276 RQGSVNSS-GKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR-PS 333
R+G+ G ++ +ACG HS ++D G L ++G G GQ G +T + + P
Sbjct: 70 REGNKPEQIGALADEHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEESVAVPR 129
Query: 334 YASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD-QAENVPKLLETPIL 392
L + Q++ G WH + ++ +G+ + +G N GQLG G + ++ P+ + + L
Sbjct: 130 LIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS--L 187
Query: 393 ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI-HGFLPRNI 451
E V+ G HS L+ G V WG N GQLGL D DR P V + I
Sbjct: 188 EGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRAQKVVYI 247
Query: 452 ACGWWHTLLLAET 464
+CG HT +L ++
Sbjct: 248 SCGEEHTAVLTKS 260
Score = 241 (89.9 bits), Expect = 5.1e-17, P = 5.1e-17
Identities = 58/175 (33%), Positives = 87/175 (49%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
VKE+ACGG HS + + G + T G GQ GH + +P +L D + +A G
Sbjct: 36 VKEVACGGDHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADEHIVHVACGE 93
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGT-GVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
H++ +S G+++ +G GQLG +++ VP+L++ L + VSCG H
Sbjct: 94 SHSLALSDRGQLFSWGAGSDGQLGLMTTEESVAVPRLIQK--LNQQTILQVSCGNWHCLA 151
Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNI-PSLV-PIHGFLPRNIACGWWHTLLLA 462
L DGQ +WG N +GQLGLG P V + G +A G H+ L+
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 206
Score = 230 (86.0 bits), Expect = 6.0e-22, Sum P(2) = 6.0e-22
Identities = 59/178 (33%), Positives = 89/178 (50%)
Query: 285 KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST-NDQLRPSYASSLMDIQV 343
K + + +++CG H + G T+G +GQ G G Q P SL I +
Sbjct: 133 KLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPL 192
Query: 344 EQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCG 403
Q+AAG H+ +S+ G V+ +G N GQLG ++ P +L +++ +SCG
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESP--CHVKLLRAQKVVYISCG 250
Query: 404 ARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI-PSLV-PIHGFLPRNIACGWWHTL 459
H+AVLT+ G V ++G GQLG DS++ + P V + G IACG HTL
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTL 307
Score = 189 (71.6 bits), Expect = 3.5e-19, Sum P(2) = 3.5e-19
Identities = 39/84 (46%), Positives = 50/84 (59%)
Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
I+CG H+AV+T +G + TFG G GQ GH S ND++ P LM +V QIA G HT
Sbjct: 247 ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHT 306
Query: 354 VC-ISVEGRVYVFGGNQFGQLGTG 376
+ + G +Y FG GQLGTG
Sbjct: 307 LAFVPSSGLIYAFGCGARGQLGTG 330
Score = 181 (68.8 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 54/162 (33%), Positives = 81/162 (50%)
Query: 310 LLTFGWGLYGQCGHGSTNDQ---LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFG 366
+L +G+ GQ G STN Q P + D V+++A G H+V + +G VY G
Sbjct: 1 MLCWGYWSLGQPGI-STNLQGIVAEPQVCGFISDRSVKEVACGGDHSVFLLEDGEVYTCG 59
Query: 367 GNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQ 426
N GQLG ++ N P+ + L + V+CG HS L++ GQ+ SWG GQ
Sbjct: 60 LNTKGQLGH--EREGNKPEQIGA--LADEHIVHVACGESHSLALSDRGQLFSWGAGSDGQ 115
Query: 427 LGLGDSIDR-NIPSLVP-IHGFLPRNIACGWWHTLLLAETTQ 466
LGL + + +P L+ ++ ++CG WH L LA Q
Sbjct: 116 LGLMTTEESVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQ 157
Score = 123 (48.4 bits), Expect = 3.5e-19, Sum P(2) = 3.5e-19
Identities = 37/171 (21%), Positives = 70/171 (40%)
Query: 60 CG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
CG +LA S+ G+L +WG+ D +T+ + P + ++++ + G HC+
Sbjct: 91 CGESHSLALSDRGQLFSWGAGSDGQLGLMTTEESVAVPRLIQKLNQQTILQVSCGNWHCL 150
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV 177
++ G+ +TWG + + ++F S S Q+ +P Q + +
Sbjct: 151 ALAADGQFFTWG-KNSHGQLGLGKEFPSQASPQR--VRSLEGIPLAQVAAGGAHSFALSL 207
Query: 178 KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ DE SPC V L K+ ++ G HT +L+
Sbjct: 208 SGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRAQKVVYISCGEEHTAVLT 258
Score = 105 (42.0 bits), Expect = 6.0e-22, Sum P(2) = 6.0e-22
Identities = 35/111 (31%), Positives = 55/111 (49%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCG--GD-SWKDV-CGGGCGFALATSESGKLITWGSA 78
WGY P S L I A ++CG D S K+V CGG L E G++ T G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGDHSVFLL--EDGEVYTCG-L 60
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ +GQ L + G PE + +V A G +H +++++ G++++WG
Sbjct: 61 NTKGQ--LGHEREGNKPEQIGALADEHIVHVACGESHSLALSDRGQLFSWG 109
Score = 90 (36.7 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 29/94 (30%), Positives = 42/94 (44%)
Query: 40 SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
SP R G V GG + A S SG + WG ++ GQ L+ + E+P
Sbjct: 180 SPQRVRSLEGIPLAQVAAGGA-HSFALSLSGAVFGWGM-NNAGQLGLSDEEDRESPCHVK 237
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
L VV + G H +T++G V+T+G C
Sbjct: 238 LLRAQKVVYISCGEEHTAVLTKSGGVFTFGAGSC 271
Score = 81 (33.6 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 20/46 (43%), Positives = 26/46 (56%)
Query: 289 SYVKEIACGGRHS-AVVTDAGALLTFGWGLYGQCGHGSTNDQLRPS 333
S V +IACG +H+ A V +G + FG G GQ G G T + PS
Sbjct: 294 SEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPS 339
Score = 40 (19.1 bits), Expect = 3.5e-15, Sum P(2) = 3.5e-15
Identities = 9/16 (56%), Positives = 10/16 (62%)
Query: 214 ITKVAAGGRHTLILSD 229
I VA G H+L LSD
Sbjct: 86 IVHVACGESHSLALSD 101
>UNIPROTKB|F1NDJ4 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104312 EMBL:AADN02038799 IPI:IPI00812606
Ensembl:ENSGALT00000038135 OMA:GHKDTSS Uniprot:F1NDJ4
Length = 221
Score = 160 (61.4 bits), Expect = 7.3e-22, Sum P(2) = 7.3e-22
Identities = 35/78 (44%), Positives = 45/78 (57%)
Query: 384 PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP- 442
P LL+ P LE A VSCG+RH+A LT G++ +WGW KYGQLG GD + P V
Sbjct: 107 PALLDLP-LEPAVA-AVSCGSRHTAALTRGGELNTWGWGKYGQLGHGDRASCDHPRRVEQ 164
Query: 443 --IHGFLPRNIACGWWHT 458
G + + CG W+T
Sbjct: 165 LWAEGLRAQEVVCGPWNT 182
Score = 139 (54.0 bits), Expect = 9.0e-12, Sum P(2) = 9.0e-12
Identities = 27/73 (36%), Positives = 40/73 (54%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLM--DIQVEQIAA 348
V ++CG RH+A +T G L T+GWG YGQ GHG P L ++ +++
Sbjct: 118 VAAVSCGSRHTAALTRGGELNTWGWGKYGQLGHGDRASCDHPRRVEQLWAEGLRAQEVVC 177
Query: 349 GLWHT-VCISVEG 360
G W+T VC+ +G
Sbjct: 178 GPWNTYVCVLQQG 190
Score = 136 (52.9 bits), Expect = 7.3e-22, Sum P(2) = 7.3e-22
Identities = 24/57 (42%), Positives = 36/57 (63%)
Query: 318 YGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
+GQ GHGS + +P +L + + +AAG WH+ C+S G +YV+G N+ GQLG
Sbjct: 10 HGQLGHGSLESEQQPRLVEALGGVPMRAVAAGGWHSACVSDGGDLYVWGWNESGQLG 66
Score = 121 (47.7 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 25/62 (40%), Positives = 38/62 (61%)
Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
++ GQLG G ++E P+L+E L + V+ G HSA +++ G + WGWN+ GQL
Sbjct: 8 HRHGQLGHGSLESEQQPRLVEA--LGGVPMRAVAAGGWHSACVSDGGDLYVWGWNESGQL 65
Query: 428 GL 429
GL
Sbjct: 66 GL 67
Score = 84 (34.6 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 27/85 (31%), Positives = 48/85 (56%)
Query: 337 SLMDIQVEQ-IAA---GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPI 391
+L+D+ +E +AA G HT ++ G + +G ++GQLG G D+A + P+ +E
Sbjct: 108 ALLDLPLEPAVAAVSCGSRHTAALTRGGELNTWGWGKYGQLGHG-DRASCDHPRRVEQLW 166
Query: 392 LESKRAKVVSCGARHSAV-LTEDGQ 415
E RA+ V CG ++ V + + G+
Sbjct: 167 AEGLRAQEVVCGPWNTYVCVLQQGE 191
Score = 80 (33.2 bits), Expect = 5.0e-16, Sum P(2) = 5.0e-16
Identities = 15/32 (46%), Positives = 20/32 (62%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCG 322
++ +A GG HSA V+D G L +GW GQ G
Sbjct: 35 MRAVAAGGWHSACVSDGGDLYVWGWNESGQLG 66
Score = 78 (32.5 bits), Expect = 8.1e-16, Sum P(2) = 8.1e-16
Identities = 12/24 (50%), Positives = 16/24 (66%)
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRE 132
AA GW H V++ G++Y WGW E
Sbjct: 39 AAGGW-HSACVSDGGDLYVWGWNE 61
Score = 52 (23.4 bits), Expect = 4.0e-13, Sum P(2) = 4.0e-13
Identities = 13/27 (48%), Positives = 16/27 (59%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSD 229
P LV GV + VAAGG H+ +SD
Sbjct: 24 PRLVEALGGVPMRAVAAGGWHSACVSD 50
>UNIPROTKB|Q15034 [details] [associations]
symbol:HERC3 "Probable E3 ubiquitin-protein ligase HERC3"
species:9606 "Homo sapiens" [GO:0016023 "cytoplasmic
membrane-bounded vesicle" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IBA] [GO:0005737 "cytoplasm" evidence=IDA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0016023 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 EMBL:CH471057 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 eggNOG:COG5021 EMBL:D25215 EMBL:AK289990
IPI:IPI00014216 RefSeq:NP_001258531.1 RefSeq:NP_055421.1
UniGene:Hs.35804 ProteinModelPortal:Q15034 SMR:Q15034 IntAct:Q15034
MINT:MINT-158126 STRING:Q15034 PhosphoSite:Q15034 DMDM:2495699
PaxDb:Q15034 PRIDE:Q15034 DNASU:8916 Ensembl:ENST00000264345
Ensembl:ENST00000402738 GeneID:8916 KEGG:hsa:8916 UCSC:uc003hrw.1
CTD:8916 GeneCards:GC04P089444 HGNC:HGNC:4876 HPA:HPA039170
MIM:605200 neXtProt:NX_Q15034 PharmGKB:PA29251 HOGENOM:HOG000208452
HOVERGEN:HBG050878 InParanoid:Q15034 KO:K10614 OMA:SPAVDFR
OrthoDB:EOG4RBQHS PhylomeDB:Q15034 ChiTaRS:HERC3 GenomeRNAi:8916
NextBio:33540 ArrayExpress:Q15034 Bgee:Q15034 CleanEx:HS_HERC3
Genevestigator:Q15034 Uniprot:Q15034
Length = 1050
Score = 245 (91.3 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 61/193 (31%), Positives = 95/193 (49%)
Query: 276 RQGSVNSS-GKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR-PS 333
R+G+ G ++ +ACG HS ++D G L ++G G GQ G +T D + P
Sbjct: 70 REGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPR 129
Query: 334 YASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD-QAENVPKLLETPIL 392
L + Q++ G WH + ++ +G+ + +G N GQLG G + ++ P+ + + L
Sbjct: 130 LIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS--L 187
Query: 393 ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI-HGFLPRNI 451
E V+ G HS L+ G V WG N GQLGL D DR P V + I
Sbjct: 188 EGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYI 247
Query: 452 ACGWWHTLLLAET 464
+CG HT +L ++
Sbjct: 248 SCGEEHTAVLTKS 260
Score = 240 (89.5 bits), Expect = 5.0e-16, Sum P(2) = 5.0e-16
Identities = 58/175 (33%), Positives = 86/175 (49%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
VKE+ACGG HS + + G + T G GQ GH + +P +L D + +A G
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIIHVACGE 93
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGT-GVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
H++ +S G+++ +G GQLG + + VP+L++ L + VSCG H
Sbjct: 94 SHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK--LNQQTILQVSCGNWHCLA 151
Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNI-PSLV-PIHGFLPRNIACGWWHTLLLA 462
L DGQ +WG N +GQLGLG P V + G +A G H+ L+
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 206
Score = 229 (85.7 bits), Expect = 7.7e-22, Sum P(2) = 7.7e-22
Identities = 59/178 (33%), Positives = 89/178 (50%)
Query: 285 KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST-NDQLRPSYASSLMDIQV 343
K + + +++CG H + G T+G +GQ G G Q P SL I +
Sbjct: 133 KLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPL 192
Query: 344 EQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCG 403
Q+AAG H+ +S+ G V+ +G N GQLG ++ P +L +++ +SCG
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESP--CHVKLLRTQKVVYISCG 250
Query: 404 ARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI-PSLV-PIHGFLPRNIACGWWHTL 459
H+AVLT+ G V ++G GQLG DS++ + P V + G IACG HTL
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTL 307
Score = 189 (71.6 bits), Expect = 9.2e-19, Sum P(2) = 9.2e-19
Identities = 39/84 (46%), Positives = 50/84 (59%)
Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
I+CG H+AV+T +G + TFG G GQ GH S ND++ P LM +V QIA G HT
Sbjct: 247 ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHT 306
Query: 354 VC-ISVEGRVYVFGGNQFGQLGTG 376
+ + G +Y FG GQLGTG
Sbjct: 307 LAFVPSSGLIYAFGCGARGQLGTG 330
Score = 184 (69.8 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 55/162 (33%), Positives = 81/162 (50%)
Query: 310 LLTFGWGLYGQCGHGSTNDQ---LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFG 366
+L +G+ GQ G STN Q P + D V+++A G H+V + +G VY G
Sbjct: 1 MLCWGYWSLGQPGI-STNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG 59
Query: 367 GNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQ 426
N GQLG ++ N P+ + L + V+CG HS L++ GQ+ SWG GQ
Sbjct: 60 LNTKGQLGH--EREGNKPEQIGA--LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ 115
Query: 427 LGLGDSIDR-NIPSLVP-IHGFLPRNIACGWWHTLLLAETTQ 466
LGL + D +P L+ ++ ++CG WH L LA Q
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQ 157
Score = 119 (46.9 bits), Expect = 9.2e-19, Sum P(2) = 9.2e-19
Identities = 37/171 (21%), Positives = 69/171 (40%)
Query: 60 CG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
CG +LA S+ G+L +WG+ D +T+ P + ++++ + G HC+
Sbjct: 91 CGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCL 150
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV 177
++ G+ +TWG + + ++F S S Q+ +P Q + +
Sbjct: 151 ALAADGQFFTWG-KNSHGQLGLGKEFPSQASPQR--VRSLEGIPLAQVAAGGAHSFALSL 207
Query: 178 KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ DE SPC V L K+ ++ G HT +L+
Sbjct: 208 SGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Score = 105 (42.0 bits), Expect = 7.7e-22, Sum P(2) = 7.7e-22
Identities = 34/111 (30%), Positives = 55/111 (49%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCG--GD-SWKDV-CGGGCGFALATSESGKLITWGSA 78
WGY P S L I A ++CG D S K+V CGG L E G++ T G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLL--EDGEVYTCG-L 60
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ +GQ L + G PE + ++ A G +H +++++ G++++WG
Sbjct: 61 NTKGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWG 109
Score = 94 (38.1 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 30/94 (31%), Positives = 42/94 (44%)
Query: 40 SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
SP R G V GG + A S SG + WG ++ GQ L+ K E+P
Sbjct: 180 SPQRVRSLEGIPLAQVAAGGA-HSFALSLSGAVFGWGM-NNAGQLGLSDEKDRESPCHVK 237
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
L VV + G H +T++G V+T+G C
Sbjct: 238 LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSC 271
Score = 81 (33.6 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 20/46 (43%), Positives = 26/46 (56%)
Query: 289 SYVKEIACGGRHS-AVVTDAGALLTFGWGLYGQCGHGSTNDQLRPS 333
S V +IACG +H+ A V +G + FG G GQ G G T + PS
Sbjct: 294 SEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPS 339
Score = 39 (18.8 bits), Expect = 5.8e-15, Sum P(2) = 5.8e-15
Identities = 9/16 (56%), Positives = 10/16 (62%)
Query: 214 ITKVAAGGRHTLILSD 229
I VA G H+L LSD
Sbjct: 86 IIHVACGESHSLALSD 101
Score = 37 (18.1 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 6/14 (42%), Positives = 10/14 (71%)
Query: 214 ITKVAAGGRHTLIL 227
+ +VA GG H++ L
Sbjct: 36 VKEVACGGNHSVFL 49
>UNIPROTKB|F1RMH6 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
OMA:ERPGAWF GeneTree:ENSGT00700000104312 EMBL:CT868688
Ensembl:ENSSSCT00000002041 Uniprot:F1RMH6
Length = 382
Score = 169 (64.5 bits), Expect = 1.0e-21, Sum P(2) = 1.0e-21
Identities = 28/82 (34%), Positives = 50/82 (60%)
Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW 351
+ + G H+ ++ AG + ++G G +GQ GHG+ + P +L + + ++AAG W
Sbjct: 167 RRLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAEREPRVLEALQGLPMAEVAAGGW 226
Query: 352 HTVCISVEGRVYVFGGNQFGQL 373
H+VC+S G +Y++G N+ GQL
Sbjct: 227 HSVCVSETGDIYIWGWNESGQL 248
Score = 163 (62.4 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 33/98 (33%), Positives = 52/98 (53%)
Query: 332 PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
P Y ++ ++ G H + + G+V+ +GG + GQLG G +AE P++LE
Sbjct: 155 PFYRPLAPTLRARRLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAEREPRVLEA-- 212
Query: 392 LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
L+ V+ G HS ++E G + WGWN+ GQL L
Sbjct: 213 LQGLPMAEVAAGGWHSVCVSETGDIYIWGWNESGQLAL 250
Score = 155 (59.6 bits), Expect = 1.0e-21, Sum P(2) = 1.0e-21
Identities = 35/82 (42%), Positives = 49/82 (59%)
Query: 384 PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP- 442
P LL+ P L S K SCG+RH+AV+T G++ +WGW KYGQLG D+ + P V
Sbjct: 297 PALLDLP-LGSDAVKA-SCGSRHTAVVTRTGELYTWGWGKYGQLGHKDTTSLDRPCRVEY 354
Query: 443 -IHGFLP-RNIACGWWHTLLLA 462
+ L R ++CG W+T + A
Sbjct: 355 FVDKQLQVRTVSCGPWNTYVFA 376
Score = 155 (59.6 bits), Expect = 3.4e-15, Sum P(2) = 3.4e-15
Identities = 33/75 (44%), Positives = 42/75 (56%)
Query: 287 GRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMD--IQVE 344
G VK +CG RH+AVVT G L T+GWG YGQ GH T RP +D +QV
Sbjct: 305 GSDAVKA-SCGSRHTAVVTRTGELYTWGWGKYGQLGHKDTTSLDRPCRVEYFVDKQLQVR 363
Query: 345 QIAAGLWHTVCISVE 359
++ G W+T +VE
Sbjct: 364 TVSCGPWNTYVFAVE 378
Score = 132 (51.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 28/79 (35%), Positives = 43/79 (54%)
Query: 390 PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD-SIDRNIPSLVPIHGFLP 448
P+ + RA+ + GA H+ +L GQV SWG ++GQLG G +R L + G
Sbjct: 159 PLAPTLRARRLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAEREPRVLEALQGLPM 218
Query: 449 RNIACGWWHTLLLAETTQI 467
+A G WH++ ++ET I
Sbjct: 219 AEVAAGGWHSVCVSETGDI 237
Score = 108 (43.1 bits), Expect = 3.4e-15, Sum P(2) = 3.4e-15
Identities = 35/121 (28%), Positives = 51/121 (42%)
Query: 59 GCGFALATSESGKLITWGSA--DDEGQSYLTSGKHGETPEPFP-LPTEASVVKAAAGWAH 115
G AL +G++ +WG G L + + E LP A V AA GW H
Sbjct: 172 GAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAEREPRVLEALQGLPM-AEV--AAGGW-H 227
Query: 116 CVSVTEAGEVYTWGWRE----CVPSAKVTRD----FGSAGSFQKDSTGKQSALPTEQAPP 167
V V+E G++Y WGW E +P+ + D G A +D + + A E P
Sbjct: 228 SVCVSETGDIYIWGWNESGQLALPARSLAEDGKTITGDAPGLNEDGSEAKRATEGEDGGP 287
Query: 168 S 168
+
Sbjct: 288 T 288
Score = 71 (30.1 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 56/260 (21%), Positives = 91/260 (35%)
Query: 82 GQSYLTSGKHGE--TPEPFPLP-TEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
GQ+ L SG+ + +PEP +P V + +A W++ +VT G + G SA
Sbjct: 18 GQA-LGSGRGRQVYSPEPLEVPGASLDVCRVSASWSYTATVTRGGRLELSG--SVSGSAG 74
Query: 139 VTRDFGSAGSFQ---KDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASG 195
RD ++ + + TG S + P GE + + E + P G
Sbjct: 75 GCRDAWASEALLVVLRAGTGSDSGAELQAWAPGSSLRGEPLWAQTVVLEV-ERKDGPG-G 132
Query: 196 DEF----FTLSPCLVT-----------LNPGVKITKVAAGGRHTLILSDMXXXXXXXXXX 240
DE L PC L P ++ ++ G H L+L D
Sbjct: 133 DETQAGPLPLLPCASAYVSPQPPFYRPLAPTLRARRLELGAEHALLL-DAAGQVFSWGGG 191
Query: 241 XXXXXXXSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRH 300
++ P ++ L+ P+ E+A GG H
Sbjct: 192 RHGQLGHGTLEAEREPRVLEALQGL------PMA------------------EVAAGGWH 227
Query: 301 SAVVTDAGALLTFGWGLYGQ 320
S V++ G + +GW GQ
Sbjct: 228 SVCVSETGDIYIWGWNESGQ 247
Score = 71 (30.1 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 16/57 (28%), Positives = 30/57 (52%)
Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCG 403
+ G HT ++ G +Y +G ++GQLG + + P +E + + + + VSCG
Sbjct: 312 SCGSRHTAVVTRTGELYTWGWGKYGQLGHKDTTSLDRPCRVEYFVDKQLQVRTVSCG 368
Score = 59 (25.8 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
Identities = 40/157 (25%), Positives = 56/157 (35%)
Query: 79 DDEGQSYLTSG-KHGETPE-PFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE-CVP 135
D GQ + G +HG+ E V++A G EV GW CV
Sbjct: 180 DAAGQVFSWGGGRHGQLGHGTLEAEREPRVLEALQG-------LPMAEVAAGGWHSVCVS 232
Query: 136 SAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR-AGEEVVKRRKTSSAREESENPAS 194
T D G + +G Q ALP K G+ S A+ +E
Sbjct: 233 E---TGDIYIWGW---NESG-QLALPARSLAEDGKTITGDAPGLNEDGSEAKRATEGEDG 285
Query: 195 GDE-FFTLSP--CLVTLNPGVKITKVAAGGRHTLILS 228
G F + P L+ L G K + G RHT +++
Sbjct: 286 GPTPFIAVQPFPALLDLPLGSDAVKASCGSRHTAVVT 322
>UNIPROTKB|O95714 [details] [associations]
symbol:HERC2 "E3 ubiquitin-protein ligase HERC2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0020037 "heme binding" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=NAS] [GO:0006886 "intracellular protein transport"
evidence=NAS] [GO:0006281 "DNA repair" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IPI] [GO:0032183 "SUMO binding"
evidence=IDA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS00191 PROSITE:PS01357 PROSITE:PS50082
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS50294
PROSITE:PS51416 SMART:SM00119 SMART:SM00291 UniPathway:UPA00143
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
Reactome:REACT_6900 GO:GO:0006886 GO:GO:0005814 PROSITE:PS00678
GO:GO:0005743 GO:GO:0046872 GO:GO:0008270 GO:GO:0006281
GO:GO:0007283 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0005085 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939
Pfam:PF03256 PROSITE:PS51284 GO:GO:0042787 GO:GO:0032183
Gene3D:2.30.30.30 InterPro:IPR021097 InterPro:IPR014722
Pfam:PF11515 SUPFAM:SSF56204 eggNOG:COG5021 CTD:8924 KO:K10595
OMA:QLAFTRD EMBL:AF071172 EMBL:AC091304 EMBL:AC126332 EMBL:AC135329
EMBL:AF224243 EMBL:AF224242 EMBL:AF224245 EMBL:AF224244
EMBL:AF224249 EMBL:AF224246 EMBL:AF224247 EMBL:AF224248
EMBL:AF224251 EMBL:AF224250 EMBL:AF224255 EMBL:AF224254
EMBL:AF224252 EMBL:AF224253 EMBL:AF224257 EMBL:AF224256
EMBL:AF225401 EMBL:AF225400 EMBL:AF225404 EMBL:AF225402
EMBL:AF225403 EMBL:AF225407 EMBL:AF225405 EMBL:AF225406
EMBL:AF225409 EMBL:AF225408 IPI:IPI00005826 RefSeq:NP_004658.3
UniGene:Hs.434890 UniGene:Hs.610412 UniGene:Hs.741019 PDB:2KEO
PDB:3KCI PDBsum:2KEO PDBsum:3KCI ProteinModelPortal:O95714
SMR:O95714 DIP:DIP-37632N IntAct:O95714 STRING:O95714
PhosphoSite:O95714 PaxDb:O95714 PRIDE:O95714
Ensembl:ENST00000261609 GeneID:8924 KEGG:hsa:8924 UCSC:uc001zbj.3
GeneCards:GC15M028356 H-InvDB:HIX0012044 H-InvDB:HIX0017540
H-InvDB:HIX0038121 H-InvDB:HIX0038320 H-InvDB:HIX0038830
H-InvDB:HIX0173226 H-InvDB:HIX0173299 H-InvDB:HIX0194348
HGNC:HGNC:4868 HPA:CAB017188 MIM:227220 MIM:605837
neXtProt:NX_O95714 PharmGKB:PA29243 HOVERGEN:HBG081598
InParanoid:O95714 OrthoDB:EOG41C6V9 PhylomeDB:O95714
EvolutionaryTrace:O95714 GenomeRNAi:8924 NextBio:33552
ArrayExpress:O95714 Bgee:O95714 Genevestigator:O95714
GermOnline:ENSG00000128731 InterPro:IPR006624 SMART:SM00706
Uniprot:O95714
Length = 4834
Score = 280 (103.6 bits), Expect = 5.6e-21, Sum P(2) = 5.6e-21
Identities = 66/188 (35%), Positives = 98/188 (52%)
Query: 283 SGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ 342
SGK +V IACG +SA +T G L T+G G YG+ GHGS+ D+ P + L ++
Sbjct: 545 SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 604
Query: 343 VEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVV 400
V +A G T+ ++ G+V+ +G +G+LG G PKL+E L+ V
Sbjct: 605 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK--LQDLDVVKV 662
Query: 401 SCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTL 459
CG++ S LT+DGQV SWG +LG G P L+ + G ++A G H L
Sbjct: 663 RCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCL 722
Query: 460 LLAETTQI 467
L E +++
Sbjct: 723 ALTEDSEV 730
Score = 230 (86.0 bits), Expect = 1.0e-21, Sum P(3) = 1.0e-21
Identities = 54/180 (30%), Positives = 95/180 (52%)
Query: 290 YVKEIAC--GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA 347
++K++A GG+H ++ G + ++G G+ GHG+ + RP SL I+V +A
Sbjct: 4038 FIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVA 4097
Query: 348 AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA--R 405
AG H+ C++ G +Y +G ++G+LG + + PKL+E L+ R ++CG+
Sbjct: 4098 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA--LQGHRVVDIACGSGDA 4155
Query: 406 HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAET 464
+ LT+D V SWG YG+LG G S +P + + G + CG ++ L ++
Sbjct: 4156 QTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4215
Score = 228 (85.3 bits), Expect = 3.2e-21, Sum P(2) = 3.2e-21
Identities = 59/182 (32%), Positives = 99/182 (54%)
Query: 289 SYV-KEIAC--GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQ 345
SYV K++A GGRH+ +T G + ++G G G+ GH S + +P +L ++
Sbjct: 3044 SYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRD 3103
Query: 346 IAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGAR 405
IA G H+ ++ G +Y +G ++G+LG G + + PK+++ +L R V+CG+R
Sbjct: 3104 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK--VLLGHRVIQVACGSR 3161
Query: 406 --HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLA 462
+ LT++G V SWG +G+LG G S NIP + ++G I CG +L L
Sbjct: 3162 DAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3221
Query: 463 ET 464
++
Sbjct: 3222 KS 3223
Score = 215 (80.7 bits), Expect = 5.7e-20, Sum P(3) = 5.7e-20
Identities = 55/172 (31%), Positives = 86/172 (50%)
Query: 291 VKEIACGG--RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
V +IACG + +TD + ++G G YG+ G G ++ P SL + V ++
Sbjct: 4145 VVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 4204
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
G +V ++ G VY +G + +LG G D P+ ++ L+ K+ ++ G+ H
Sbjct: 4205 GSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG--LQGKKVIAIATGSLHCV 4262
Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTL 459
TEDG+V +WG N GQLG G + P LV + G +ACG HTL
Sbjct: 4263 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4314
Score = 209 (78.6 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 60/192 (31%), Positives = 91/192 (47%)
Query: 284 GKAGRSYVKEIA-CGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ 342
G A R+ VK A G H + G + ++G G G+ GHG T P S+ Q
Sbjct: 489 GLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ 548
Query: 343 ----VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAK 398
V IA G ++ I+ EG +Y +G +G+LG G + E +P L+ L+ +
Sbjct: 549 AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAG--LKGLKVI 606
Query: 399 VVSCGARHSAVL--TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGW 455
V+CG+ + L TE+GQV SWG YG+LG G S P L+ + + CG
Sbjct: 607 DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGS 666
Query: 456 WHTLLLAETTQI 467
++ L + Q+
Sbjct: 667 QFSIALTKDGQV 678
Score = 206 (77.6 bits), Expect = 6.0e-19, Sum P(3) = 6.0e-19
Identities = 54/162 (33%), Positives = 84/162 (51%)
Query: 297 GGRHSA-VVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHT 353
GG + VT G L G+G G+ G G T P+ S+ + ++++A +G H
Sbjct: 3992 GGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHC 4051
Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
+ +S EG VY +G + G+LG G + P+++E+ L V+ G HSA +T
Sbjct: 4052 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES--LRGIEVVDVAAGGAHSACVTAA 4109
Query: 414 GQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACG 454
G + +WG +YG+LG DS D+ P LV + G +IACG
Sbjct: 4110 GDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACG 4151
Score = 201 (75.8 bits), Expect = 3.5e-18, Sum P(2) = 3.5e-18
Identities = 53/172 (30%), Positives = 86/172 (50%)
Query: 291 VKEIACGGR--HSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
V ++ACG R + +TD G + ++G G +G+ G G + P L V QI
Sbjct: 3153 VIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIEC 3212
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
G ++ ++ G V+ +G + +LG G D P+++E L K+ V+ GA H
Sbjct: 3213 GAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG--LRGKKIVHVAVGALHCL 3270
Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTL 459
+T+ GQV +WG N +GQ G G + P+LV + G +ACG H++
Sbjct: 3271 AVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3322
Score = 197 (74.4 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 52/169 (30%), Positives = 85/169 (50%)
Query: 291 VKEIACGG--RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
V ++ACG + VT+ G + ++G G YG+ G G ++ P L D+ V ++
Sbjct: 605 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC 664
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
G ++ ++ +G+VY +G +LG G ++ PKLLE L+ K+ V+ G+ H
Sbjct: 665 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG--LQGKKVIDVAAGSTHCL 722
Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNI---ACG 454
LTED +V SWG N Q D++ P + G ++I ACG
Sbjct: 723 ALTEDSEVHSWGSND--QCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 769
Score = 188 (71.2 bits), Expect = 9.8e-17, Sum P(2) = 9.8e-17
Identities = 59/193 (30%), Positives = 94/193 (48%)
Query: 281 NSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG--QCGHGSTNDQLR-PSYASS 337
+ G +G S +++ A G +A + F WGL Q G G +++ PS++ +
Sbjct: 2935 DEKGNSG-SLIRKKAAGLESAATIRTK----VFVWGLNDKDQLG-GLKGSKIKVPSFSET 2988
Query: 338 LMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRA 397
L + V Q+A G ++VEG+VY G G+LG G+ VP + L S
Sbjct: 2989 LSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSG-TVPIPRQITALSSYVV 3047
Query: 398 KVVSC--GARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACG 454
K V+ G RH+ LT DG+V SWG G+LG ++ + P L+ + R+IACG
Sbjct: 3048 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACG 3107
Query: 455 WWHTLLLAETTQI 467
H+ L + ++
Sbjct: 3108 SSHSAALTSSGEL 3120
Score = 181 (68.8 bits), Expect = 4.1e-15, Sum P(3) = 4.1e-15
Identities = 39/121 (32%), Positives = 61/121 (50%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
V +I CG + S +T +G + T+G G Y + GHGS +P L ++ +A G
Sbjct: 3207 VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGA 3266
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
H + ++ G+VY +G N GQ G G P L++ LE ++ V+CG+ HS
Sbjct: 3267 LHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSVAW 3324
Query: 411 T 411
T
Sbjct: 3325 T 3325
Score = 147 (56.8 bits), Expect = 2.2e-12, Sum P(3) = 2.2e-12
Identities = 44/156 (28%), Positives = 79/156 (50%)
Query: 308 GALLTFGWGLY--GQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYV 364
G+ +GWG GQ G G +++ P+ +L ++ Q+ G ++ +G++Y
Sbjct: 3950 GSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA 4008
Query: 365 FGGNQFGQLGTGVDQAENVPKLLETPILESKRAKV-VSCGARHSAVLTEDGQVLSWGWNK 423
G G+LG G ++ + P LLE+ I KV V+ G +H L+ +G+V SWG +
Sbjct: 4009 TGYGAGGRLGIGGTESVSTPTLLES-IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4067
Query: 424 YGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHT 458
G+LG G+ + P ++ + G ++A G H+
Sbjct: 4068 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4103
Score = 118 (46.6 bits), Expect = 1.0e-21, Sum P(3) = 1.0e-21
Identities = 28/77 (36%), Positives = 40/77 (51%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAG 112
VC CG F+LA ++SG + TWG D + S H P+ +V A G
Sbjct: 3207 VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVG 3265
Query: 113 WAHCVSVTEAGEVYTWG 129
HC++VT++G+VY WG
Sbjct: 3266 ALHCLAVTDSGQVYAWG 3282
Score = 115 (45.5 bits), Expect = 3.2e-21, Sum P(2) = 3.2e-21
Identities = 25/78 (32%), Positives = 43/78 (55%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 716
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 717 GSTHCLALTEDSEVHSWG 734
Score = 109 (43.4 bits), Expect = 1.3e-19, Sum P(4) = 1.3e-19
Identities = 36/113 (31%), Positives = 53/113 (46%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWK--DV-CGGGCGFALATSESGKLITWGS 77
+Y WG G S IP + G K DV CG G LA +E+G++ +WG
Sbjct: 572 LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGD 631
Query: 78 ADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
D G+ G G +TP+ + VVK G +++T+ G+VY+WG
Sbjct: 632 GD-YGKLG-RGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWG 682
Score = 109 (43.4 bits), Expect = 4.0e-19, Sum P(2) = 4.0e-19
Identities = 30/77 (38%), Positives = 39/77 (50%)
Query: 55 VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT--EASVVKAAAG 112
V GG LA S G++ +WG A+D G+ L G P + + VV AAG
Sbjct: 4044 VNSGG-KHCLALSSEGEVYSWGEAED-GK--LGHGNRSPCDRPRVIESLRGIEVVDVAAG 4099
Query: 113 WAHCVSVTEAGEVYTWG 129
AH VT AG++YTWG
Sbjct: 4100 GAHSACVTAAGDLYTWG 4116
Score = 100 (40.3 bits), Expect = 1.4e-13, Sum P(3) = 1.4e-13
Identities = 28/95 (29%), Positives = 43/95 (45%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 3034 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3092
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ A G +H ++T +GE+YTWG E
Sbjct: 3093 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3127
Score = 98 (39.6 bits), Expect = 3.0e-07, Sum P(3) = 3.0e-07
Identities = 25/74 (33%), Positives = 37/74 (50%)
Query: 284 GKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQV 343
G G+ + IA G H T+ G + T+G GQ G G+TN RP ++L +V
Sbjct: 4245 GLQGKKVIA-IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKV 4303
Query: 344 EQIAAGLWHTVCIS 357
++A G HT+ S
Sbjct: 4304 NRVACGSAHTLAWS 4317
Score = 98 (39.6 bits), Expect = 3.0e-07, Sum P(3) = 3.0e-07
Identities = 34/121 (28%), Positives = 60/121 (49%)
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGARHSAV 409
W T+ G +Y +G N GQLG G++ A+ VP E L + R + G +
Sbjct: 3944 W-TLSAGGSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEA--LATLRPVQLIGGEQTLFA 3999
Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI--HGFLPR-NIACGWWHTLLLAETTQ 466
+T DG++ + G+ G+LG+G + + P+L+ H F+ + + G H L L+ +
Sbjct: 4000 VTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 4059
Query: 467 I 467
+
Sbjct: 4060 V 4060
Score = 90 (36.7 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 32/113 (28%), Positives = 45/113 (39%)
Query: 22 VYMWG---YLPGTSPEKSPILSPIPARLCGGDSWKDV-CGGGCGFALATSESGKLITWGS 77
+Y WG Y + L P G D+ CG G L ++ + +WG
Sbjct: 4112 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGD 4171
Query: 78 ADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
D G+ G G + P T VVK G V++T++G VYTWG
Sbjct: 4172 GD-YGKLG-RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWG 4222
Score = 73 (30.8 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 26/75 (34%), Positives = 39/75 (52%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGET-P--EPFPLPT----EAS--VVKAAAGWA 114
LA + +G++ +WG D G+ G HG+T P EP + +A VV A G
Sbjct: 508 LALAATGEVYSWGCGDG-GRL----G-HGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561
Query: 115 HCVSVTEAGEVYTWG 129
+ ++T GE+YTWG
Sbjct: 562 YSAAITAEGELYTWG 576
Score = 71 (30.1 bits), Expect = 7.4e-15, Sum P(3) = 7.4e-15
Identities = 22/77 (28%), Positives = 33/77 (42%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA--AGWAH 115
GG A + GKL G G+ + + TP + K A +G H
Sbjct: 3992 GGEQTLFAVTADGKLYATGYGAG-GRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKH 4050
Query: 116 CVSVTEAGEVYTWGWRE 132
C++++ GEVY+WG E
Sbjct: 4051 CLALSSEGEVYSWGEAE 4067
Score = 70 (29.7 bits), Expect = 8.8e-17, Sum P(3) = 8.8e-17
Identities = 20/75 (26%), Positives = 33/75 (44%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAAGWA 114
CG LA ++ G + +WG D G+ G G P+ V + G
Sbjct: 3158 CGSRDAQTLALTDEGLVFSWGDGDF-GKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQ 3215
Query: 115 HCVSVTEAGEVYTWG 129
+++T++G V+TWG
Sbjct: 3216 FSLALTKSGVVWTWG 3230
Score = 57 (25.1 bits), Expect = 3.1e-09, Sum P(3) = 3.1e-09
Identities = 21/81 (25%), Positives = 33/81 (40%)
Query: 49 GDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVK 108
G+S + G A + K+ WG +D+ Q G + P + +VV+
Sbjct: 2938 GNSGSLIRKKAAGLESAATIRTKVFVWG-LNDKDQLGGLKGSKIKVPSFSETLSALNVVQ 2996
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
A G +VT G+VY G
Sbjct: 2997 VAGGSKSLFAVTVEGKVYACG 3017
Score = 55 (24.4 bits), Expect = 5.0e-09, Sum P(3) = 5.0e-09
Identities = 22/80 (27%), Positives = 32/80 (40%)
Query: 54 DVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGW 113
DV G LA +E ++ +WGS +D+ Q + T PEP LP
Sbjct: 713 DVAAGST-HCLALTEDSEVHSWGS-NDQCQHFDTL--RVTKPEPAALP--------GLDT 760
Query: 114 AHCVSVTEAGEVYTWGWREC 133
H V + G ++ W C
Sbjct: 761 KHIVGIA-CGPAQSFAWSSC 779
Score = 54 (24.1 bits), Expect = 5.6e-21, Sum P(2) = 5.6e-21
Identities = 18/52 (34%), Positives = 27/52 (51%)
Query: 82 GQSYLTSGKHGETPEPFPLPTEAS--VVKAAA--GWAHCVSVTEAGEVYTWG 129
G+ Y T + +T P + AS +VK AA H +++ GEVY+WG
Sbjct: 470 GRVY-TQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWG 520
Score = 52 (23.4 bits), Expect = 7.1e-14, Sum P(4) = 7.1e-14
Identities = 16/62 (25%), Positives = 26/62 (41%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G LA ++SG++ WG +D GQ + P + + A G +H V+
Sbjct: 3265 GALHCLAVTDSGQVYAWGD-NDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3323
Query: 119 VT 120
T
Sbjct: 3324 WT 3325
Score = 48 (22.0 bits), Expect = 1.0e-21, Sum P(3) = 1.0e-21
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTL 225
P LV G KIT+VA G H++
Sbjct: 3300 PTLVQGLEGQKITRVACGSSHSV 3322
Score = 45 (20.9 bits), Expect = 4.3e-21, Sum P(3) = 4.3e-21
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
G + P +V G KI VA G H L ++D
Sbjct: 3240 GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3274
Score = 45 (20.9 bits), Expect = 1.2e-19, Sum P(3) = 1.2e-19
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 202 SPC----LVTLNPGVKITKVAAGGRHT 224
SPC ++ G+++ VAAGG H+
Sbjct: 4077 SPCDRPRVIESLRGIEVVDVAAGGAHS 4103
Score = 42 (19.8 bits), Expect = 4.3e-21, Sum P(3) = 4.3e-21
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILS 228
+P L+ V I KVA +GG+H L LS
Sbjct: 4027 TPTLLESIQHVFIKKVAVNSGGKHCLALS 4055
Score = 41 (19.5 bits), Expect = 4.1e-15, Sum P(3) = 4.1e-15
Identities = 6/9 (66%), Positives = 6/9 (66%)
Query: 413 DGQVLSWGW 421
DG V WGW
Sbjct: 3694 DGSVNGWGW 3702
Score = 40 (19.1 bits), Expect = 1.6e-07, Sum P(3) = 1.6e-07
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 60 CGFALATSESGKLITWGSADDEGQSYLTSGKHGE 93
C T + T+G ++ GQS + G+ G+
Sbjct: 2732 CETCFKTKKHNTRHTFGRINEPGQSAVFCGRSGK 2765
Score = 39 (18.8 bits), Expect = 1.3e-19, Sum P(4) = 1.3e-19
Identities = 6/9 (66%), Positives = 6/9 (66%)
Query: 123 GEVYTWGWR 131
G V WGWR
Sbjct: 3695 GSVNGWGWR 3703
>UNIPROTKB|G3V2I3 [details] [associations]
symbol:RCCD1 "RCC1 domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 EMBL:AC068831 HGNC:HGNC:30457
ProteinModelPortal:G3V2I3 SMR:G3V2I3 Ensembl:ENST00000555155
ArrayExpress:G3V2I3 Bgee:G3V2I3 Uniprot:G3V2I3
Length = 374
Score = 176 (67.0 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 29/82 (35%), Positives = 52/82 (63%)
Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW 351
+++ G H+ ++ AG + ++G G +GQ GHG+ +L P +L + + ++AAG W
Sbjct: 161 RQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLVMAEVAAGGW 220
Query: 352 HTVCISVEGRVYVFGGNQFGQL 373
H+VC+S G +Y++G N+ GQL
Sbjct: 221 HSVCVSETGDIYIWGWNESGQL 242
Score = 169 (64.5 bits), Expect = 8.1e-10, P = 8.1e-10
Identities = 35/98 (35%), Positives = 53/98 (54%)
Query: 332 PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
P Y +++ Q+ G H + + G+V+ +GG + GQLG G +AE P+LLE
Sbjct: 149 PFYRPLAPELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEA-- 206
Query: 392 LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
L+ V+ G HS ++E G + WGWN+ GQL L
Sbjct: 207 LQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQLAL 244
Score = 154 (59.3 bits), Expect = 2.5e-15, Sum P(2) = 2.5e-15
Identities = 33/75 (44%), Positives = 42/75 (56%)
Query: 287 GRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMD--IQVE 344
G VK +CG RH+AVVT G L T+GWG YGQ GH T RP +D +QV+
Sbjct: 297 GSDAVKA-SCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRRVEYFVDKQLQVK 355
Query: 345 QIAAGLWHTVCISVE 359
+ G W+T +VE
Sbjct: 356 AVTCGPWNTYVYAVE 370
Score = 146 (56.5 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 33/82 (40%), Positives = 48/82 (58%)
Query: 384 PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP- 442
P LL+ P + S K SCG+RH+AV+T G++ +WGW KYGQLG D+ + P V
Sbjct: 289 PALLDLP-MGSDAVKA-SCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRRVEY 346
Query: 443 -IHGFLP-RNIACGWWHTLLLA 462
+ L + + CG W+T + A
Sbjct: 347 FVDKQLQVKAVTCGPWNTYVYA 368
Score = 138 (53.6 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 58/207 (28%), Positives = 90/207 (43%)
Query: 276 RQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW--GLYGQCGHGSTNDQLR-- 331
RQ S +AG + ++ ++A VT G L G G G+C ++ L
Sbjct: 27 RQVHSPSPLRAGVDICR-VSASWSYTAFVTRGGRLELSGSASGAAGRCKDAWASEGLLAV 85
Query: 332 ----PSYASSLMDIQVEQIAAG--LW-HTVCISVEGRVYVFGGNQFGQLGT-GVDQAENV 383
P + L E G LW V EG G Q G+L +A
Sbjct: 86 LRAGPGPEALLQVWAAESALRGEPLWAQNVVPEAEGEDDPAGEAQAGRLPLLPCARAYVS 145
Query: 384 PKL-LETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI-PSLV 441
P+ P+ RA+ + GA H+ +L GQV SWG ++GQLG G +++ + P L+
Sbjct: 146 PRAPFYRPLAPELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHG-TLEAELEPRLL 204
Query: 442 P-IHGFLPRNIACGWWHTLLLAETTQI 467
+ G + +A G WH++ ++ET I
Sbjct: 205 EALQGLVMAEVAAGGWHSVCVSETGDI 231
Score = 110 (43.8 bits), Expect = 2.5e-15, Sum P(2) = 2.5e-15
Identities = 32/92 (34%), Positives = 41/92 (44%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA---AAGWAH 115
G AL +G++ +WG GQ L G EP L +V A A GW H
Sbjct: 166 GAEHALLLDAAGQVFSWGGGR-HGQ--LGHGTLEAELEPRLLEALQGLVMAEVAAGGW-H 221
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG 147
V V+E G++Y WGW E A TR+ G
Sbjct: 222 SVCVSETGDIYIWGWNESGQLALPTRNLAEDG 253
Score = 78 (32.5 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 21/85 (24%), Positives = 41/85 (48%)
Query: 332 PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
P+ M + + G HT ++ G +Y +G ++GQLG + + P+ +E +
Sbjct: 289 PALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRRVEYFV 348
Query: 392 LESKRAKVVSCGARHSAVLT-EDGQ 415
+ + K V+CG ++ V E G+
Sbjct: 349 DKQLQVKAVTCGPWNTYVYAVEKGK 373
Score = 54 (24.1 bits), Expect = 3.6e-10, Sum P(3) = 3.6e-10
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 97 PF--PLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
PF PL E + G H + + AG+V++WG
Sbjct: 149 PFYRPLAPELRARQLELGAEHALLLDAAGQVFSWG 183
Score = 51 (23.0 bits), Expect = 3.6e-10, Sum P(3) = 3.6e-10
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSD 229
L P L+ G+ + +VAAGG H++ +S+
Sbjct: 199 LEPRLLEALQGLVMAEVAAGGWHSVCVSE 227
>UNIPROTKB|D4ACN3 [details] [associations]
symbol:Herc2 "Protein Herc2" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
RGD:1307989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005743 GO:GO:0046872 GO:GO:0008270 GO:GO:0006281
GO:GO:0007283 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 OrthoDB:EOG41C6V9 InterPro:IPR006624
SMART:SM00706 IPI:IPI00764717 Ensembl:ENSRNOT00000019245
ArrayExpress:D4ACN3 Uniprot:D4ACN3
Length = 4779
Score = 279 (103.3 bits), Expect = 1.2e-20, Sum P(2) = 1.2e-20
Identities = 66/188 (35%), Positives = 98/188 (52%)
Query: 283 SGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ 342
SGK +V IACG +SA +T G L T+G G YG+ GHGS+ D+ P + L ++
Sbjct: 491 SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 550
Query: 343 VEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVV 400
V +A G T+ ++ G+V+ +G +G+LG G PKL+E L+ V
Sbjct: 551 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK--LQDLDVIKV 608
Query: 401 SCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTL 459
CG++ S LT+DGQV SWG +LG G P L+ + G ++A G H L
Sbjct: 609 RCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCL 668
Query: 460 LLAETTQI 467
L E +++
Sbjct: 669 ALTEDSEV 676
Score = 229 (85.7 bits), Expect = 1.3e-21, Sum P(3) = 1.3e-21
Identities = 54/180 (30%), Positives = 95/180 (52%)
Query: 290 YVKEIAC--GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA 347
++K++A GG+H ++ G + ++G G+ GHG+ + RP SL I+V +A
Sbjct: 3983 FIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVA 4042
Query: 348 AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA--R 405
AG H+ C++ G +Y +G ++G+LG + + PKL+E L+ R ++CG+
Sbjct: 4043 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA--LQGHRVIDIACGSGDA 4100
Query: 406 HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAET 464
+ LT+D V SWG YG+LG G S +P + + G + CG ++ L ++
Sbjct: 4101 QTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4160
Score = 228 (85.3 bits), Expect = 3.1e-21, Sum P(2) = 3.1e-21
Identities = 59/182 (32%), Positives = 99/182 (54%)
Query: 289 SYV-KEIAC--GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQ 345
SYV K++A GGRH+ +T G + ++G G G+ GH S + +P +L ++
Sbjct: 2988 SYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRD 3047
Query: 346 IAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGAR 405
IA G H+ ++ G +Y +G ++G+LG G + + PK+++ +L R V+CG+R
Sbjct: 3048 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK--VLLGHRVIQVACGSR 3105
Query: 406 --HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLA 462
+ LT++G V SWG +G+LG G S NIP + ++G I CG +L L
Sbjct: 3106 DAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3165
Query: 463 ET 464
++
Sbjct: 3166 KS 3167
Score = 214 (80.4 bits), Expect = 7.1e-20, Sum P(3) = 7.1e-20
Identities = 55/172 (31%), Positives = 86/172 (50%)
Query: 291 VKEIACGG--RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
V +IACG + +TD + ++G G YG+ G G ++ P SL + V ++
Sbjct: 4090 VIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 4149
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
G +V ++ G VY +G + +LG G D P+ ++ L+ K+ ++ G+ H
Sbjct: 4150 GSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG--LQGKKVIAIATGSLHCV 4207
Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTL 459
TEDG+V +WG N GQLG G + P LV + G +ACG HTL
Sbjct: 4208 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4259
Score = 209 (78.6 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 60/192 (31%), Positives = 91/192 (47%)
Query: 284 GKAGRSYVKEIA-CGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ 342
G A R+ VK A G H + G + ++G G G+ GHG T P S+ Q
Sbjct: 435 GLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ 494
Query: 343 ----VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAK 398
V IA G ++ I+ EG +Y +G +G+LG G + E +P L+ L+ +
Sbjct: 495 AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAG--LKGLKVI 552
Query: 399 VVSCGARHSAVL--TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGW 455
V+CG+ + L TE+GQV SWG YG+LG G S P L+ + + CG
Sbjct: 553 DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGS 612
Query: 456 WHTLLLAETTQI 467
++ L + Q+
Sbjct: 613 QFSIALTKDGQV 624
Score = 206 (77.6 bits), Expect = 5.8e-19, Sum P(3) = 5.8e-19
Identities = 54/162 (33%), Positives = 84/162 (51%)
Query: 297 GGRHSA-VVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHT 353
GG + VT G L G+G G+ G G T P+ S+ + ++++A +G H
Sbjct: 3937 GGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHC 3996
Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
+ +S EG VY +G + G+LG G + P+++E+ L V+ G HSA +T
Sbjct: 3997 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES--LRGIEVVDVAAGGAHSACVTAA 4054
Query: 414 GQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACG 454
G + +WG +YG+LG DS D+ P LV + G +IACG
Sbjct: 4055 GDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACG 4096
Score = 201 (75.8 bits), Expect = 3.4e-18, Sum P(2) = 3.4e-18
Identities = 53/172 (30%), Positives = 86/172 (50%)
Query: 291 VKEIACGGR--HSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
V ++ACG R + +TD G + ++G G +G+ G G + P L V QI
Sbjct: 3097 VIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIEC 3156
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
G ++ ++ G V+ +G + +LG G D P+++E L K+ V+ GA H
Sbjct: 3157 GAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG--LRGKKIVHVAVGALHCL 3214
Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTL 459
+T+ GQV +WG N +GQ G G + P+LV + G +ACG H++
Sbjct: 3215 AVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3266
Score = 196 (74.1 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 52/169 (30%), Positives = 85/169 (50%)
Query: 291 VKEIACGG--RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
V ++ACG + VT+ G + ++G G YG+ G G ++ P L D+ V ++
Sbjct: 551 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRC 610
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
G ++ ++ +G+VY +G +LG G ++ PKLLE L+ K+ V+ G+ H
Sbjct: 611 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG--LQGKKVIDVAAGSTHCL 668
Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNI---ACG 454
LTED +V SWG N Q D++ P + G ++I ACG
Sbjct: 669 ALTEDSEVHSWGSND--QCQHFDTLRVTKPEPTALPGLDTKHIVGIACG 715
Score = 181 (68.8 bits), Expect = 4.0e-15, Sum P(3) = 4.0e-15
Identities = 39/121 (32%), Positives = 61/121 (50%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
V +I CG + S +T +G + T+G G Y + GHGS +P L ++ +A G
Sbjct: 3151 VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGA 3210
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
H + ++ G+VY +G N GQ G G P L++ LE ++ V+CG+ HS
Sbjct: 3211 LHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSVAW 3268
Query: 411 T 411
T
Sbjct: 3269 T 3269
Score = 178 (67.7 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 53/161 (32%), Positives = 81/161 (50%)
Query: 313 FGWGLYG--QCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQ 369
F WGL Q G G +++ PS++ +L + V Q+A G ++VEG+VY G
Sbjct: 2906 FVWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEAT 2964
Query: 370 FGQLGTGVDQAENVPKLLETPILESKRAKVVSC--GARHSAVLTEDGQVLSWGWNKYGQL 427
G+LG G+ VP + L S K V+ G RH+ LT DG+V SWG G+L
Sbjct: 2965 NGRLGLGMSSG-TVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3023
Query: 428 GLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
G ++ + P L+ + R+IACG H+ L + ++
Sbjct: 3024 GHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGEL 3064
Score = 147 (56.8 bits), Expect = 2.1e-12, Sum P(3) = 2.1e-12
Identities = 44/156 (28%), Positives = 79/156 (50%)
Query: 308 GALLTFGWGLY--GQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYV 364
G+ +GWG GQ G G +++ P+ +L ++ Q+ G ++ +G++Y
Sbjct: 3895 GSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA 3953
Query: 365 FGGNQFGQLGTGVDQAENVPKLLETPILESKRAKV-VSCGARHSAVLTEDGQVLSWGWNK 423
G G+LG G ++ + P LLE+ I KV V+ G +H L+ +G+V SWG +
Sbjct: 3954 TGYGAGGRLGIGGTESVSTPTLLES-IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4012
Query: 424 YGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHT 458
G+LG G+ + P ++ + G ++A G H+
Sbjct: 4013 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4048
Score = 118 (46.6 bits), Expect = 1.3e-21, Sum P(3) = 1.3e-21
Identities = 28/77 (36%), Positives = 40/77 (51%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAG 112
VC CG F+LA ++SG + TWG D + S H P+ +V A G
Sbjct: 3151 VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVG 3209
Query: 113 WAHCVSVTEAGEVYTWG 129
HC++VT++G+VY WG
Sbjct: 3210 ALHCLAVTDSGQVYAWG 3226
Score = 115 (45.5 bits), Expect = 3.1e-21, Sum P(2) = 3.1e-21
Identities = 25/78 (32%), Positives = 43/78 (55%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 604 DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 662
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 663 GSTHCLALTEDSEVHSWG 680
Score = 109 (43.4 bits), Expect = 5.0e-19, Sum P(2) = 5.0e-19
Identities = 30/77 (38%), Positives = 39/77 (50%)
Query: 55 VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT--EASVVKAAAG 112
V GG LA S G++ +WG A+D G+ L G P + + VV AAG
Sbjct: 3989 VNSGG-KHCLALSSEGEVYSWGEAED-GK--LGHGNRSPCDRPRVIESLRGIEVVDVAAG 4044
Query: 113 WAHCVSVTEAGEVYTWG 129
AH VT AG++YTWG
Sbjct: 4045 GAHSACVTAAGDLYTWG 4061
Score = 108 (43.1 bits), Expect = 2.0e-19, Sum P(4) = 2.0e-19
Identities = 35/113 (30%), Positives = 53/113 (46%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWK--DV-CGGGCGFALATSESGKLITWGS 77
+Y WG G S IP + G K DV CG G LA +E+G++ +WG
Sbjct: 518 LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGD 577
Query: 78 ADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
D G+ G G +TP+ + V+K G +++T+ G+VY+WG
Sbjct: 578 GD-YGKLG-RGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWG 628
Score = 100 (40.3 bits), Expect = 1.3e-13, Sum P(3) = 1.3e-13
Identities = 28/95 (29%), Positives = 43/95 (45%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 2978 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3036
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ A G +H ++T +GE+YTWG E
Sbjct: 3037 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3071
Score = 98 (39.6 bits), Expect = 2.9e-07, Sum P(3) = 2.9e-07
Identities = 25/74 (33%), Positives = 37/74 (50%)
Query: 284 GKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQV 343
G G+ + IA G H T+ G + T+G GQ G G+TN RP ++L +V
Sbjct: 4190 GLQGKKVIA-IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKV 4248
Query: 344 EQIAAGLWHTVCIS 357
++A G HT+ S
Sbjct: 4249 NRVACGSAHTLAWS 4262
Score = 98 (39.6 bits), Expect = 2.9e-07, Sum P(3) = 2.9e-07
Identities = 34/121 (28%), Positives = 60/121 (49%)
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGARHSAV 409
W T+ G +Y +G N GQLG G++ A+ VP E L + R + G +
Sbjct: 3889 W-TLSAGGSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEA--LATLRPVQLIGGEQTLFA 3944
Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI--HGFLPR-NIACGWWHTLLLAETTQ 466
+T DG++ + G+ G+LG+G + + P+L+ H F+ + + G H L L+ +
Sbjct: 3945 VTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 4004
Query: 467 I 467
+
Sbjct: 4005 V 4005
Score = 89 (36.4 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 32/113 (28%), Positives = 45/113 (39%)
Query: 22 VYMWG---YLPGTSPEKSPILSPIPARLCGGDSWKDV-CGGGCGFALATSESGKLITWGS 77
+Y WG Y + L P G D+ CG G L ++ + +WG
Sbjct: 4057 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGD 4116
Query: 78 ADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
D G+ G G + P T VVK G V++T++G VYTWG
Sbjct: 4117 GD-YGKLG-RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWG 4167
Score = 80 (33.2 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 26/77 (33%), Positives = 42/77 (54%)
Query: 357 SVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGARHSAVLTEDGQ 415
++ +V+V+G N QLG G+ ++ VP ET L + V+ G++ +T +G+
Sbjct: 2900 TIRTKVFVWGLNDKDQLG-GLKGSKIKVPSFSET--LSALNVVQVAGGSKSLFAVTVEGK 2956
Query: 416 VLSWGWNKYGQLGLGDS 432
V S G G+LGLG S
Sbjct: 2957 VYSCGEATNGRLGLGMS 2973
Score = 73 (30.8 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 26/75 (34%), Positives = 39/75 (52%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGET-P--EPFPLPT----EAS--VVKAAAGWA 114
LA + +G++ +WG D G+ G HG+T P EP + +A VV A G
Sbjct: 454 LALAATGEVYSWGCGDG-GRL----G-HGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 507
Query: 115 HCVSVTEAGEVYTWG 129
+ ++T GE+YTWG
Sbjct: 508 YSAAITAEGELYTWG 522
Score = 71 (30.1 bits), Expect = 9.3e-15, Sum P(3) = 9.3e-15
Identities = 22/77 (28%), Positives = 33/77 (42%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA--AGWAH 115
GG A + GKL G G+ + + TP + K A +G H
Sbjct: 3937 GGEQTLFAVTADGKLYATGYGAG-GRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKH 3995
Query: 116 CVSVTEAGEVYTWGWRE 132
C++++ GEVY+WG E
Sbjct: 3996 CLALSSEGEVYSWGEAE 4012
Score = 70 (29.7 bits), Expect = 1.1e-16, Sum P(3) = 1.1e-16
Identities = 20/75 (26%), Positives = 33/75 (44%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAAGWA 114
CG LA ++ G + +WG D G+ G G P+ V + G
Sbjct: 3102 CGSRDAQTLALTDEGLVFSWGDGDF-GKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQ 3159
Query: 115 HCVSVTEAGEVYTWG 129
+++T++G V+TWG
Sbjct: 3160 FSLALTKSGVVWTWG 3174
Score = 55 (24.4 bits), Expect = 4.8e-09, Sum P(3) = 4.8e-09
Identities = 17/59 (28%), Positives = 27/59 (45%)
Query: 71 KLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
K+ WG +D+ Q G + P + +VV+ A G +VT G+VY+ G
Sbjct: 2904 KVFVWG-LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCG 2961
Score = 55 (24.4 bits), Expect = 4.8e-09, Sum P(3) = 4.8e-09
Identities = 22/80 (27%), Positives = 32/80 (40%)
Query: 54 DVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGW 113
DV G LA +E ++ +WGS +D+ Q + T PEP LP
Sbjct: 659 DVAAGST-HCLALTEDSEVHSWGS-NDQCQHFDTL--RVTKPEPTALP--------GLDT 706
Query: 114 AHCVSVTEAGEVYTWGWREC 133
H V + G ++ W C
Sbjct: 707 KHIVGIA-CGPAQSFAWSSC 725
Score = 52 (23.4 bits), Expect = 1.2e-20, Sum P(2) = 1.2e-20
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 105 SVVKAAA--GWAHCVSVTEAGEVYTWG 129
++VK AA H +++ GEVY+WG
Sbjct: 440 NIVKIAAHSDGHHYLALAATGEVYSWG 466
Score = 52 (23.4 bits), Expect = 8.8e-14, Sum P(4) = 8.8e-14
Identities = 16/62 (25%), Positives = 26/62 (41%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G LA ++SG++ WG +D GQ + P + + A G +H V+
Sbjct: 3209 GALHCLAVTDSGQVYAWGD-NDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3267
Query: 119 VT 120
T
Sbjct: 3268 WT 3269
Score = 48 (22.0 bits), Expect = 1.3e-21, Sum P(3) = 1.3e-21
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTL 225
P LV G KIT+VA G H++
Sbjct: 3244 PTLVQGLEGQKITRVACGSSHSV 3266
Score = 45 (20.9 bits), Expect = 5.4e-21, Sum P(3) = 5.4e-21
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
G + P +V G KI VA G H L ++D
Sbjct: 3184 GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3218
Score = 45 (20.9 bits), Expect = 1.4e-19, Sum P(3) = 1.4e-19
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 202 SPC----LVTLNPGVKITKVAAGGRHT 224
SPC ++ G+++ VAAGG H+
Sbjct: 4022 SPCDRPRVIESLRGIEVVDVAAGGAHS 4048
Score = 42 (19.8 bits), Expect = 5.4e-21, Sum P(3) = 5.4e-21
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILS 228
+P L+ V I KVA +GG+H L LS
Sbjct: 3972 TPTLLESIQHVFIKKVAVNSGGKHCLALS 4000
Score = 41 (19.5 bits), Expect = 4.0e-15, Sum P(3) = 4.0e-15
Identities = 6/9 (66%), Positives = 6/9 (66%)
Query: 413 DGQVLSWGW 421
DG V WGW
Sbjct: 3639 DGSVNGWGW 3647
Score = 40 (19.1 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 60 CGFALATSESGKLITWGSADDEGQSYLTSGKHGE 93
C T + T+G ++ GQS + G+ G+
Sbjct: 2676 CETCFKTKKHNTRHTFGRINEPGQSAVFCGRSGK 2709
Score = 39 (18.8 bits), Expect = 2.0e-19, Sum P(4) = 2.0e-19
Identities = 6/9 (66%), Positives = 6/9 (66%)
Query: 123 GEVYTWGWR 131
G V WGWR
Sbjct: 3640 GSVNGWGWR 3648
>MGI|MGI:103234 [details] [associations]
symbol:Herc2 "hect (homologous to the E6-AP (UBE3A) carboxyl
terminus) domain and RCC1 (CHC1)-like domain (RLD) 2" species:10090
"Mus musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;IBA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;IBA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005743 "mitochondrial inner membrane"
evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0006281
"DNA repair" evidence=ISO] [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=ISO] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016874
"ligase activity" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=ISO] [GO:0032183 "SUMO binding" evidence=ISO] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=IBA] [GO:0046872 "metal ion binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS00191 PROSITE:PS01357 PROSITE:PS50082
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS50294
PROSITE:PS51416 SMART:SM00119 SMART:SM00291 UniPathway:UPA00143
MGI:MGI:103234 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005814 PROSITE:PS00678 GO:GO:0005743 GO:GO:0046872
GO:GO:0008270 GO:GO:0006281 GO:GO:0007283 GO:GO:0020037
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 GO:GO:0042787 GO:GO:0032183 Gene3D:2.30.30.30
InterPro:IPR021097 InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
eggNOG:COG5021 GeneTree:ENSGT00700000104208 CTD:8924 KO:K10595
OMA:QLAFTRD HOVERGEN:HBG081598 OrthoDB:EOG41C6V9 InterPro:IPR006624
SMART:SM00706 EMBL:AF061529 EMBL:AF071173 EMBL:AC102121
EMBL:AC102150 EMBL:AK141515 EMBL:AK148361 EMBL:AK161826
EMBL:AK162270 EMBL:AK162708 EMBL:AK220338 EMBL:BC044667
EMBL:BC054829 IPI:IPI00309574 IPI:IPI00314989 RefSeq:NP_034548.2
UniGene:Mm.20929 ProteinModelPortal:Q4U2R1 SMR:Q4U2R1 STRING:Q4U2R1
PhosphoSite:Q4U2R1 PaxDb:Q4U2R1 PRIDE:Q4U2R1
Ensembl:ENSMUST00000076226 Ensembl:ENSMUST00000164095 GeneID:15204
KEGG:mmu:15204 UCSC:uc009hdv.1 InParanoid:Q4U2R1 ChiTaRS:HERC2
NextBio:287753 Bgee:Q4U2R1 Genevestigator:Q4U2R1
GermOnline:ENSMUSG00000030451 Uniprot:Q4U2R1
Length = 4836
Score = 279 (103.3 bits), Expect = 1.2e-20, Sum P(2) = 1.2e-20
Identities = 66/188 (35%), Positives = 98/188 (52%)
Query: 283 SGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ 342
SGK +V IACG +SA +T G L T+G G YG+ GHGS+ D+ P + L ++
Sbjct: 546 SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 605
Query: 343 VEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVV 400
V +A G T+ ++ G+V+ +G +G+LG G PKL+E L+ V
Sbjct: 606 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK--LQDLDVIKV 663
Query: 401 SCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTL 459
CG++ S LT+DGQV SWG +LG G P L+ + G ++A G H L
Sbjct: 664 RCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCL 723
Query: 460 LLAETTQI 467
L E +++
Sbjct: 724 ALTEDSEV 731
Score = 229 (85.7 bits), Expect = 1.4e-21, Sum P(3) = 1.4e-21
Identities = 54/180 (30%), Positives = 95/180 (52%)
Query: 290 YVKEIAC--GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA 347
++K++A GG+H ++ G + ++G G+ GHG+ + RP SL I+V +A
Sbjct: 4040 FIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVA 4099
Query: 348 AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA--R 405
AG H+ C++ G +Y +G ++G+LG + + PKL+E L+ R ++CG+
Sbjct: 4100 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA--LQGHRVIDIACGSGDA 4157
Query: 406 HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAET 464
+ LT+D V SWG YG+LG G S +P + + G + CG ++ L ++
Sbjct: 4158 QTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4217
Score = 228 (85.3 bits), Expect = 3.2e-21, Sum P(2) = 3.2e-21
Identities = 59/182 (32%), Positives = 99/182 (54%)
Query: 289 SYV-KEIAC--GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQ 345
SYV K++A GGRH+ +T G + ++G G G+ GH S + +P +L ++
Sbjct: 3045 SYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRD 3104
Query: 346 IAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGAR 405
IA G H+ ++ G +Y +G ++G+LG G + + PK+++ +L R V+CG+R
Sbjct: 3105 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK--VLLGHRVIQVACGSR 3162
Query: 406 --HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLA 462
+ LT++G V SWG +G+LG G S NIP + ++G I CG +L L
Sbjct: 3163 DAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3222
Query: 463 ET 464
++
Sbjct: 3223 KS 3224
Score = 214 (80.4 bits), Expect = 7.3e-20, Sum P(3) = 7.3e-20
Identities = 55/172 (31%), Positives = 86/172 (50%)
Query: 291 VKEIACGG--RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
V +IACG + +TD + ++G G YG+ G G ++ P SL + V ++
Sbjct: 4147 VIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 4206
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
G +V ++ G VY +G + +LG G D P+ ++ L+ K+ ++ G+ H
Sbjct: 4207 GSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG--LQGKKVIAIATGSLHCV 4264
Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTL 459
TEDG+V +WG N GQLG G + P LV + G +ACG HTL
Sbjct: 4265 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4316
Score = 209 (78.6 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 60/192 (31%), Positives = 91/192 (47%)
Query: 284 GKAGRSYVKEIA-CGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ 342
G A R+ VK A G H + G + ++G G G+ GHG T P S+ Q
Sbjct: 490 GLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ 549
Query: 343 ----VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAK 398
V IA G ++ I+ EG +Y +G +G+LG G + E +P L+ L+ +
Sbjct: 550 AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAG--LKGLKVI 607
Query: 399 VVSCGARHSAVL--TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGW 455
V+CG+ + L TE+GQV SWG YG+LG G S P L+ + + CG
Sbjct: 608 DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGS 667
Query: 456 WHTLLLAETTQI 467
++ L + Q+
Sbjct: 668 QFSIALTKDGQV 679
Score = 206 (77.6 bits), Expect = 6.0e-19, Sum P(3) = 6.0e-19
Identities = 54/162 (33%), Positives = 84/162 (51%)
Query: 297 GGRHSA-VVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHT 353
GG + VT G L G+G G+ G G T P+ S+ + ++++A +G H
Sbjct: 3994 GGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHC 4053
Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
+ +S EG VY +G + G+LG G + P+++E+ L V+ G HSA +T
Sbjct: 4054 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES--LRGIEVVDVAAGGAHSACVTAA 4111
Query: 414 GQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACG 454
G + +WG +YG+LG DS D+ P LV + G +IACG
Sbjct: 4112 GDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACG 4153
Score = 201 (75.8 bits), Expect = 3.5e-18, Sum P(2) = 3.5e-18
Identities = 53/172 (30%), Positives = 86/172 (50%)
Query: 291 VKEIACGGR--HSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
V ++ACG R + +TD G + ++G G +G+ G G + P L V QI
Sbjct: 3154 VIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIEC 3213
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
G ++ ++ G V+ +G + +LG G D P+++E L K+ V+ GA H
Sbjct: 3214 GAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG--LRGKKIVHVAVGALHCL 3271
Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTL 459
+T+ GQV +WG N +GQ G G + P+LV + G +ACG H++
Sbjct: 3272 AVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3323
Score = 196 (74.1 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 52/169 (30%), Positives = 85/169 (50%)
Query: 291 VKEIACGG--RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
V ++ACG + VT+ G + ++G G YG+ G G ++ P L D+ V ++
Sbjct: 606 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRC 665
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
G ++ ++ +G+VY +G +LG G ++ PKLLE L+ K+ V+ G+ H
Sbjct: 666 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG--LQGKKVIDVAAGSTHCL 723
Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNI---ACG 454
LTED +V SWG N Q D++ P + G ++I ACG
Sbjct: 724 ALTEDSEVHSWGSND--QCQHFDTLRVTKPEPTALPGLDSKHIVGIACG 770
Score = 181 (68.8 bits), Expect = 4.1e-15, Sum P(3) = 4.1e-15
Identities = 39/121 (32%), Positives = 61/121 (50%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
V +I CG + S +T +G + T+G G Y + GHGS +P L ++ +A G
Sbjct: 3208 VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGA 3267
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
H + ++ G+VY +G N GQ G G P L++ LE ++ V+CG+ HS
Sbjct: 3268 LHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSVAW 3325
Query: 411 T 411
T
Sbjct: 3326 T 3326
Score = 178 (67.7 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 53/161 (32%), Positives = 81/161 (50%)
Query: 313 FGWGLYG--QCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQ 369
F WGL Q G G +++ PS++ +L + V Q+A G ++VEG+VY G
Sbjct: 2963 FVWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEAT 3021
Query: 370 FGQLGTGVDQAENVPKLLETPILESKRAKVVSC--GARHSAVLTEDGQVLSWGWNKYGQL 427
G+LG G+ VP + L S K V+ G RH+ LT DG+V SWG G+L
Sbjct: 3022 NGRLGLGMSSG-TVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3080
Query: 428 GLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
G ++ + P L+ + R+IACG H+ L + ++
Sbjct: 3081 GHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGEL 3121
Score = 147 (56.8 bits), Expect = 2.2e-12, Sum P(3) = 2.2e-12
Identities = 44/156 (28%), Positives = 79/156 (50%)
Query: 308 GALLTFGWGLY--GQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYV 364
G+ +GWG GQ G G +++ P+ +L ++ Q+ G ++ +G++Y
Sbjct: 3952 GSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA 4010
Query: 365 FGGNQFGQLGTGVDQAENVPKLLETPILESKRAKV-VSCGARHSAVLTEDGQVLSWGWNK 423
G G+LG G ++ + P LLE+ I KV V+ G +H L+ +G+V SWG +
Sbjct: 4011 TGYGAGGRLGIGGTESVSTPTLLES-IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4069
Query: 424 YGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHT 458
G+LG G+ + P ++ + G ++A G H+
Sbjct: 4070 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4105
Score = 118 (46.6 bits), Expect = 1.4e-21, Sum P(3) = 1.4e-21
Identities = 28/77 (36%), Positives = 40/77 (51%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAG 112
VC CG F+LA ++SG + TWG D + S H P+ +V A G
Sbjct: 3208 VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVG 3266
Query: 113 WAHCVSVTEAGEVYTWG 129
HC++VT++G+VY WG
Sbjct: 3267 ALHCLAVTDSGQVYAWG 3283
Score = 115 (45.5 bits), Expect = 3.2e-21, Sum P(2) = 3.2e-21
Identities = 25/78 (32%), Positives = 43/78 (55%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 659 DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 717
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 718 GSTHCLALTEDSEVHSWG 735
Score = 109 (43.4 bits), Expect = 5.2e-19, Sum P(2) = 5.2e-19
Identities = 30/77 (38%), Positives = 39/77 (50%)
Query: 55 VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT--EASVVKAAAG 112
V GG LA S G++ +WG A+D G+ L G P + + VV AAG
Sbjct: 4046 VNSGG-KHCLALSSEGEVYSWGEAED-GK--LGHGNRSPCDRPRVIESLRGIEVVDVAAG 4101
Query: 113 WAHCVSVTEAGEVYTWG 129
AH VT AG++YTWG
Sbjct: 4102 GAHSACVTAAGDLYTWG 4118
Score = 108 (43.1 bits), Expect = 2.1e-19, Sum P(4) = 2.1e-19
Identities = 35/113 (30%), Positives = 53/113 (46%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWK--DV-CGGGCGFALATSESGKLITWGS 77
+Y WG G S IP + G K DV CG G LA +E+G++ +WG
Sbjct: 573 LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGD 632
Query: 78 ADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
D G+ G G +TP+ + V+K G +++T+ G+VY+WG
Sbjct: 633 GD-YGKLG-RGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWG 683
Score = 100 (40.3 bits), Expect = 1.4e-13, Sum P(3) = 1.4e-13
Identities = 28/95 (29%), Positives = 43/95 (45%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 3035 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3093
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ A G +H ++T +GE+YTWG E
Sbjct: 3094 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3128
Score = 98 (39.6 bits), Expect = 3.0e-07, Sum P(3) = 3.0e-07
Identities = 25/74 (33%), Positives = 37/74 (50%)
Query: 284 GKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQV 343
G G+ + IA G H T+ G + T+G GQ G G+TN RP ++L +V
Sbjct: 4247 GLQGKKVIA-IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKV 4305
Query: 344 EQIAAGLWHTVCIS 357
++A G HT+ S
Sbjct: 4306 NRVACGSAHTLAWS 4319
Score = 98 (39.6 bits), Expect = 3.0e-07, Sum P(3) = 3.0e-07
Identities = 34/121 (28%), Positives = 60/121 (49%)
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGARHSAV 409
W T+ G +Y +G N GQLG G++ A+ VP E L + R + G +
Sbjct: 3946 W-TLSAGGSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEA--LATLRPVQLIGGEQTLFA 4001
Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI--HGFLPR-NIACGWWHTLLLAETTQ 466
+T DG++ + G+ G+LG+G + + P+L+ H F+ + + G H L L+ +
Sbjct: 4002 VTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 4061
Query: 467 I 467
+
Sbjct: 4062 V 4062
Score = 89 (36.4 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 32/113 (28%), Positives = 45/113 (39%)
Query: 22 VYMWG---YLPGTSPEKSPILSPIPARLCGGDSWKDV-CGGGCGFALATSESGKLITWGS 77
+Y WG Y + L P G D+ CG G L ++ + +WG
Sbjct: 4114 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGD 4173
Query: 78 ADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
D G+ G G + P T VVK G V++T++G VYTWG
Sbjct: 4174 GD-YGKLG-RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWG 4224
Score = 80 (33.2 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 26/77 (33%), Positives = 42/77 (54%)
Query: 357 SVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGARHSAVLTEDGQ 415
++ +V+V+G N QLG G+ ++ VP ET L + V+ G++ +T +G+
Sbjct: 2957 TIRTKVFVWGLNDKDQLG-GLKGSKIKVPSFSET--LSALNVVQVAGGSKSLFAVTVEGK 3013
Query: 416 VLSWGWNKYGQLGLGDS 432
V S G G+LGLG S
Sbjct: 3014 VYSCGEATNGRLGLGMS 3030
Score = 73 (30.8 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 26/75 (34%), Positives = 39/75 (52%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGET-P--EPFPLPT----EAS--VVKAAAGWA 114
LA + +G++ +WG D G+ G HG+T P EP + +A VV A G
Sbjct: 509 LALAATGEVYSWGCGDG-GRL----G-HGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562
Query: 115 HCVSVTEAGEVYTWG 129
+ ++T GE+YTWG
Sbjct: 563 YSAAITAEGELYTWG 577
Score = 71 (30.1 bits), Expect = 9.6e-15, Sum P(3) = 9.6e-15
Identities = 22/77 (28%), Positives = 33/77 (42%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA--AGWAH 115
GG A + GKL G G+ + + TP + K A +G H
Sbjct: 3994 GGEQTLFAVTADGKLYATGYGAG-GRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKH 4052
Query: 116 CVSVTEAGEVYTWGWRE 132
C++++ GEVY+WG E
Sbjct: 4053 CLALSSEGEVYSWGEAE 4069
Score = 70 (29.7 bits), Expect = 1.1e-16, Sum P(3) = 1.1e-16
Identities = 20/75 (26%), Positives = 33/75 (44%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAAGWA 114
CG LA ++ G + +WG D G+ G G P+ V + G
Sbjct: 3159 CGSRDAQTLALTDEGLVFSWGDGDF-GKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQ 3216
Query: 115 HCVSVTEAGEVYTWG 129
+++T++G V+TWG
Sbjct: 3217 FSLALTKSGVVWTWG 3231
Score = 56 (24.8 bits), Expect = 4.0e-09, Sum P(3) = 4.0e-09
Identities = 23/80 (28%), Positives = 33/80 (41%)
Query: 54 DVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGW 113
DV G LA +E ++ +WGS +D+ Q + T PEP LP S
Sbjct: 714 DVAAGST-HCLALTEDSEVHSWGS-NDQCQHFDTL--RVTKPEPTALPGLDS-------- 761
Query: 114 AHCVSVTEAGEVYTWGWREC 133
H V + G ++ W C
Sbjct: 762 KHIVGIA-CGPAQSFAWSSC 780
Score = 55 (24.4 bits), Expect = 5.0e-09, Sum P(3) = 5.0e-09
Identities = 17/59 (28%), Positives = 27/59 (45%)
Query: 71 KLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
K+ WG +D+ Q G + P + +VV+ A G +VT G+VY+ G
Sbjct: 2961 KVFVWG-LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCG 3018
Score = 52 (23.4 bits), Expect = 1.2e-20, Sum P(2) = 1.2e-20
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 105 SVVKAAA--GWAHCVSVTEAGEVYTWG 129
++VK AA H +++ GEVY+WG
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVYSWG 521
Score = 52 (23.4 bits), Expect = 9.2e-14, Sum P(4) = 9.2e-14
Identities = 16/62 (25%), Positives = 26/62 (41%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G LA ++SG++ WG +D GQ + P + + A G +H V+
Sbjct: 3266 GALHCLAVTDSGQVYAWGD-NDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324
Query: 119 VT 120
T
Sbjct: 3325 WT 3326
Score = 48 (22.0 bits), Expect = 1.4e-21, Sum P(3) = 1.4e-21
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTL 225
P LV G KIT+VA G H++
Sbjct: 3301 PTLVQGLEGQKITRVACGSSHSV 3323
Score = 45 (20.9 bits), Expect = 5.6e-21, Sum P(3) = 5.6e-21
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
G + P +V G KI VA G H L ++D
Sbjct: 3241 GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3275
Score = 45 (20.9 bits), Expect = 1.5e-19, Sum P(3) = 1.5e-19
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 202 SPC----LVTLNPGVKITKVAAGGRHT 224
SPC ++ G+++ VAAGG H+
Sbjct: 4079 SPCDRPRVIESLRGIEVVDVAAGGAHS 4105
Score = 42 (19.8 bits), Expect = 5.6e-21, Sum P(3) = 5.6e-21
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILS 228
+P L+ V I KVA +GG+H L LS
Sbjct: 4029 TPTLLESIQHVFIKKVAVNSGGKHCLALS 4057
Score = 41 (19.5 bits), Expect = 4.1e-15, Sum P(3) = 4.1e-15
Identities = 6/9 (66%), Positives = 6/9 (66%)
Query: 413 DGQVLSWGW 421
DG V WGW
Sbjct: 3696 DGSVNGWGW 3704
Score = 40 (19.1 bits), Expect = 1.6e-07, Sum P(3) = 1.6e-07
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 60 CGFALATSESGKLITWGSADDEGQSYLTSGKHGE 93
C T + T+G ++ GQS + G+ G+
Sbjct: 2733 CETCFKTKKHNTRHTFGRINEPGQSAVFCGRSGK 2766
Score = 39 (18.8 bits), Expect = 2.1e-19, Sum P(4) = 2.1e-19
Identities = 6/9 (66%), Positives = 6/9 (66%)
Query: 123 GEVYTWGWR 131
G V WGWR
Sbjct: 3697 GSVNGWGWR 3705
>TAIR|locus:2086253 [details] [associations]
symbol:AT3G23270 "AT3G23270" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0008536 "Ran GTPase binding" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007165 "signal
transduction" evidence=ISS] [GO:0035091 "phosphatidylinositol
binding" evidence=ISS] [GO:0009827 "plant-type cell wall
modification" evidence=RCA] [GO:0009860 "pollen tube growth"
evidence=RCA] InterPro:IPR000306 InterPro:IPR001849
InterPro:IPR024774 Pfam:PF01363 Pfam:PF12814 PROSITE:PS50003
SMART:SM00064 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005938 EMBL:CP002686 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046872 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS50012
GO:GO:0032065 InterPro:IPR013591 Pfam:PF08381 PROSITE:PS51514
IPI:IPI00516271 RefSeq:NP_188968.1 UniGene:At.53452
ProteinModelPortal:F4J2Y2 SMR:F4J2Y2 PRIDE:F4J2Y2
EnsemblPlants:AT3G23270.1 GeneID:821906 KEGG:ath:AT3G23270
OMA:PKFRAFR ArrayExpress:F4J2Y2 Uniprot:F4J2Y2
Length = 1045
Score = 251 (93.4 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 59/176 (33%), Positives = 92/176 (52%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
V +I CG RH A+VT G + T+G + G+ GHG D RP L ++ +A G
Sbjct: 253 VHQIVCGVRHVALVTRQGEVFTWGEEVGGRLGHGIQVDISRPKLVEFLALTNIDFVACGE 312
Query: 351 WHTVCISVEGRVYVFGG--NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
+HT +S G ++ +G + G LG G D + +PK + P LE + V+CG HSA
Sbjct: 313 YHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIPKRVSGP-LEGLQVLSVACGTWHSA 371
Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
+ T +G++ ++G +G LG G+ + P V ++G +AC WHT + E
Sbjct: 372 LATANGKLFTFGDGAFGVLGHGNRESVSYPKEVQSLNGLKTVKVACSIWHTAAIVE 427
Score = 228 (85.3 bits), Expect = 6.4e-19, Sum P(2) = 6.4e-19
Identities = 50/146 (34%), Positives = 81/146 (55%)
Query: 310 LLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQ 369
L T+G G + GHG+ L P+ SSL+D +IA G TV ++ G V+ GG
Sbjct: 441 LFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFHKIACGHTFTVALTTSGHVFTMGGTA 500
Query: 370 FGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
GQLG + + +P L++ ++ + + ++CGA H AVLT +V +WG G+LG
Sbjct: 501 HGQLGNSISDGK-LPCLVQDRLV-GEFVEEIACGAHHVAVLTSRSEVFTWGKGANGRLGH 558
Query: 430 GDSIDRNIPSLVP-IHGFLPRNIACG 454
GD+ D+ P+LV + ++++CG
Sbjct: 559 GDTEDKRTPTLVEALRDRHVKSLSCG 584
Score = 211 (79.3 bits), Expect = 5.6e-17, Sum P(2) = 5.6e-17
Identities = 59/197 (29%), Positives = 91/197 (46%)
Query: 283 SGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ 342
SG V +ACG HSA+ T G L TFG G +G GHG+ P SL ++
Sbjct: 352 SGPLEGLQVLSVACGTWHSALATANGKLFTFGDGAFGVLGHGNRESVSYPKEVQSLNGLK 411
Query: 343 VEQIAAGLWHTVCI-SVEG---------RVYVFGGNQFGQLGTGVDQAENVPKLLETPIL 392
++A +WHT I V G +++ +G +LG G + +P + + ++
Sbjct: 412 TVKVACSIWHTAAIVEVMGQTATSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSS-LI 470
Query: 393 ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP--IHGFLPRN 450
+ K+ +CG + LT G V + G +GQLG S D +P LV + G
Sbjct: 471 DYNFHKI-ACGHTFTVALTTSGHVFTMGGTAHGQLGNSIS-DGKLPCLVQDRLVGEFVEE 528
Query: 451 IACGWWHTLLLAETTQI 467
IACG H +L +++
Sbjct: 529 IACGAHHVAVLTSRSEV 545
Score = 190 (71.9 bits), Expect = 5.5e-11, Sum P(2) = 5.5e-11
Identities = 46/137 (33%), Positives = 68/137 (49%)
Query: 328 DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL 387
D L P S + + V QI G+ H ++ +G V+ +G G+LG G+ + PKL+
Sbjct: 238 DVLTPRPLESNVVLDVHQIVCGVRHVALVTRQGEVFTWGEEVGGRLGHGIQVDISRPKLV 297
Query: 388 ETPILESKRAKVVSCGARHSAVLTEDGQVLSWG--WNKYGQLGLGDSIDRNIPSLV--PI 443
E L V+CG H+ V++ G + SWG + G LG G I IP V P+
Sbjct: 298 E--FLALTNIDFVACGEYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIPKRVSGPL 355
Query: 444 HGFLPRNIACGWWHTLL 460
G ++ACG WH+ L
Sbjct: 356 EGLQVLSVACGTWHSAL 372
Score = 141 (54.7 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 33/116 (28%), Positives = 58/116 (50%)
Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWH 352
+IACG + +T +G + T G +GQ G+ ++ +L L+ VE+IA G H
Sbjct: 476 KIACGHTFTVALTTSGHVFTMGGTAHGQLGNSISDGKLPCLVQDRLVGEFVEEIACGAHH 535
Query: 353 TVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
++ V+ +G G+LG G + + P L+E L + K +SCG+ ++
Sbjct: 536 VAVLTSRSEVFTWGKGANGRLGHGDTEDKRTPTLVEA--LRDRHVKSLSCGSNFTS 589
Score = 135 (52.6 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 32/91 (35%), Positives = 49/91 (53%)
Query: 290 YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAG 349
+V+EIACG H AV+T + T+G G G+ GHG T D+ P+ +L D V+ ++ G
Sbjct: 525 FVEEIACGAHHVAVLTSRSEVFTWGKGANGRLGHGDTEDKRTPTLVEALRDRHVKSLSCG 584
Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
T I + +V G +Q + +G QA
Sbjct: 585 SNFTSSICIHK--WVSGADQ--SICSGCRQA 611
Score = 78 (32.5 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 27/81 (33%), Positives = 34/81 (41%)
Query: 56 CGGGCGFALATSES-GKLITWGSADDEG--QSYLTSGKHGETPEPFPLPTEASVV----K 108
C G G ES G + WG EG S + +T P P E++VV +
Sbjct: 197 CSSG-GSGPDDIESLGDVYVWGEVWTEGILPDGTASNETVKTDVLTPRPLESNVVLDVHQ 255
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
G H VT GEV+TWG
Sbjct: 256 IVCGVRHVALVTRQGEVFTWG 276
Score = 69 (29.3 bits), Expect = 5.6e-18, Sum P(2) = 5.6e-18
Identities = 35/121 (28%), Positives = 55/121 (45%)
Query: 22 VYMWG------YLP-GTSPE---KSPILSPIPARL-CGGDSWKDVCGGGCGFALATSESG 70
VY+WG LP GT+ K+ +L+P P D + VCG AL T + G
Sbjct: 213 VYVWGEVWTEGILPDGTASNETVKTDVLTPRPLESNVVLDVHQIVCGVR-HVALVTRQ-G 270
Query: 71 KLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA--SVVKAAAGWAHCVSVTEAGEVYTW 128
++ TWG +E L G + P + A ++ A G H V+ +G++++W
Sbjct: 271 EVFTWG---EEVGGRLGHGIQVDISRPKLVEFLALTNIDFVACGEYHTCVVSTSGDLFSW 327
Query: 129 G 129
G
Sbjct: 328 G 328
Score = 69 (29.3 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 28/72 (38%), Positives = 38/72 (52%)
Query: 65 ATSESG-KLITWGSADDEGQSYLTSGKHGETPEPFPLPT-EASVV-----KAAAGWAHCV 117
ATS S KL TWG D ++ L G HG E + LPT +S++ K A G V
Sbjct: 433 ATSMSSRKLFTWGDGD---KNRL--G-HGNK-ETYLLPTCVSSLIDYNFHKIACGHTFTV 485
Query: 118 SVTEAGEVYTWG 129
++T +G V+T G
Sbjct: 486 ALTTSGHVFTMG 497
Score = 54 (24.1 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 21/74 (28%), Positives = 29/74 (39%)
Query: 60 CG--FALATSESGKLITWGSA-DDEGQSYLTSGKHGETPEPFPLPTEA-SVVKAAAGWAH 115
CG S SG L +WG + G S P+ P E V+ A G H
Sbjct: 310 CGEYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGLQVLSVACGTWH 369
Query: 116 CVSVTEAGEVYTWG 129
T G+++T+G
Sbjct: 370 SALATANGKLFTFG 383
Score = 43 (20.2 bits), Expect = 6.1e-18, Sum P(2) = 6.1e-18
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 104 ASVVKAAAGWAHCVSVTEAGEVYTWG--WRE 132
+S ++G + + G+VY WG W E
Sbjct: 192 SSTPSCSSGGSGPDDIESLGDVYVWGEVWTE 222
>UNIPROTKB|G3MX12 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0020037 "heme binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0046872 GO:GO:0008270
GO:GO:0020037 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 InterPro:IPR006624 SMART:SM00706
EMBL:DAAA02003804 EMBL:DAAA02003805 Ensembl:ENSBTAT00000063010
Uniprot:G3MX12
Length = 4757
Score = 281 (104.0 bits), Expect = 4.1e-21, Sum P(2) = 4.1e-21
Identities = 66/188 (35%), Positives = 98/188 (52%)
Query: 283 SGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ 342
SGK +V IACG +SA +T G L T+G G YG+ GHGS+ D+ P + L ++
Sbjct: 456 SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 515
Query: 343 VEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVV 400
V +A G T+ ++ G+V+ +G +G+LG G PKL+E L+ V
Sbjct: 516 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK--LQDLDVVKV 573
Query: 401 SCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTL 459
CG++ S LT+DGQV SWG +LG G P L+ + G ++A G H L
Sbjct: 574 RCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCL 633
Query: 460 LLAETTQI 467
L E +++
Sbjct: 634 ALTEDSEV 641
Score = 228 (85.3 bits), Expect = 3.1e-21, Sum P(2) = 3.1e-21
Identities = 59/182 (32%), Positives = 99/182 (54%)
Query: 289 SYV-KEIAC--GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQ 345
SYV K++A GGRH+ +T G + ++G G G+ GH S + +P +L ++
Sbjct: 2965 SYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRD 3024
Query: 346 IAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGAR 405
IA G H+ ++ G +Y +G ++G+LG G + + PK+++ +L R V+CG+R
Sbjct: 3025 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK--VLLGHRVIQVACGSR 3082
Query: 406 --HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLA 462
+ LT++G V SWG +G+LG G S NIP + ++G I CG +L L
Sbjct: 3083 DAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3142
Query: 463 ET 464
++
Sbjct: 3143 KS 3144
Score = 226 (84.6 bits), Expect = 1.4e-21, Sum P(3) = 1.4e-21
Identities = 54/180 (30%), Positives = 94/180 (52%)
Query: 290 YVKEIAC--GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA 347
++K++A GG+H ++ G + ++G G+ GHG+ + RP SL +V +A
Sbjct: 3961 FIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVA 4020
Query: 348 AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA--R 405
AG H+ C++ G +Y +G ++G+LG + + PKL+E L+ R V+CG+
Sbjct: 4021 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA--LQGHRVVDVACGSGDA 4078
Query: 406 HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAET 464
+ LT+D V SWG YG+LG G S +P + + G + CG ++ L ++
Sbjct: 4079 QTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4138
Score = 210 (79.0 bits), Expect = 1.0e-19, Sum P(3) = 1.0e-19
Identities = 53/172 (30%), Positives = 86/172 (50%)
Query: 291 VKEIACGG--RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
V ++ACG + +TD + ++G G YG+ G G ++ P SL + V ++
Sbjct: 4068 VVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 4127
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
G +V ++ G VY +G + +LG G D P+ ++ L+ K+ ++ G+ H
Sbjct: 4128 GSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG--LQGKKVIAIATGSLHCV 4185
Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTL 459
+EDG+V +WG N GQLG G + P LV + G +ACG HTL
Sbjct: 4186 CCSEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4237
Score = 208 (78.3 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 60/192 (31%), Positives = 91/192 (47%)
Query: 284 GKAGRSYVKEIA-CGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ 342
G A R+ VK A G H + G + ++G G G+ GHG T P S+ Q
Sbjct: 400 GLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ 459
Query: 343 ----VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAK 398
V IA G ++ I+ EG +Y +G +G+LG G + E +P L+ L+ +
Sbjct: 460 AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAG--LKGLKVI 517
Query: 399 VVSCGARHSAVL--TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGW 455
V+CG+ + L TE+GQV SWG YG+LG G S P L+ + + CG
Sbjct: 518 DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGS 577
Query: 456 WHTLLLAETTQI 467
++ L + Q+
Sbjct: 578 QFSVALTKDGQV 589
Score = 207 (77.9 bits), Expect = 2.2e-19, Sum P(3) = 2.2e-19
Identities = 53/162 (32%), Positives = 84/162 (51%)
Query: 297 GGRHSA-VVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHT 353
GG + VT G L G+G G+ G G T P+ S+ + ++++A +G H
Sbjct: 3915 GGEQTLFAVTADGKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHC 3974
Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
+ +S EG VY +G + G+LG G + P+++E+ L V+ G HSA +T
Sbjct: 3975 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES--LRGTEVVDVAAGGAHSACVTAA 4032
Query: 414 GQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACG 454
G + +WG +YG+LG DS D+ P LV + G ++ACG
Sbjct: 4033 GDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACG 4074
Score = 199 (75.1 bits), Expect = 5.7e-18, Sum P(2) = 5.7e-18
Identities = 53/172 (30%), Positives = 86/172 (50%)
Query: 291 VKEIACGGR--HSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
V ++ACG R + +TD G + ++G G +G+ G G + P L V QI
Sbjct: 3074 VIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIEC 3133
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
G ++ ++ G V+ +G + +LG G D P+++E L K+ V+ GA H
Sbjct: 3134 GAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG--LRGKKIVHVAVGALHCL 3191
Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTL 459
+T+ GQV +WG N +GQ G G + P+LV + G +ACG H++
Sbjct: 3192 AVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3243
Score = 199 (75.1 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 54/169 (31%), Positives = 86/169 (50%)
Query: 291 VKEIACGG--RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
V ++ACG + VT+ G + ++G G YG+ G G ++ P L D+ V ++
Sbjct: 516 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC 575
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
G +V ++ +G+VY +G +LG G ++ PKLLE L+ K+ V+ G+ H
Sbjct: 576 GSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG--LQGKKVIDVAAGSTHCL 633
Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNI---ACG 454
LTED +V SWG N Q + + PS +P G ++I ACG
Sbjct: 634 ALTEDSEVHSWGSNDQCQHFDTLRVTKPEPSALP--GLDTKHIVGIACG 680
Score = 188 (71.2 bits), Expect = 9.4e-17, Sum P(2) = 9.4e-17
Identities = 59/193 (30%), Positives = 94/193 (48%)
Query: 281 NSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG--QCGHGSTNDQLR-PSYASS 337
+ G +G S +++ A G +A + F WGL Q G G +++ PS++ +
Sbjct: 2856 DEKGNSG-SLIRKKAAGLESAATIRTK----VFVWGLNDKDQLG-GLKGSKIKVPSFSET 2909
Query: 338 LMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRA 397
L + V Q+A G ++VEG+VY G G+LG G+ VP + L S
Sbjct: 2910 LSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSG-TVPIPRQITALSSYVV 2968
Query: 398 KVVSC--GARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACG 454
K V+ G RH+ LT DG+V SWG G+LG ++ + P L+ + R+IACG
Sbjct: 2969 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACG 3028
Query: 455 WWHTLLLAETTQI 467
H+ L + ++
Sbjct: 3029 SSHSAALTSSGEL 3041
Score = 180 (68.4 bits), Expect = 5.1e-15, Sum P(3) = 5.1e-15
Identities = 39/121 (32%), Positives = 61/121 (50%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
V +I CG + S +T +G + T+G G Y + GHGS +P L ++ +A G
Sbjct: 3128 VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGA 3187
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
H + ++ G+VY +G N GQ G G P L++ LE ++ V+CG+ HS
Sbjct: 3188 LHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSVAW 3245
Query: 411 T 411
T
Sbjct: 3246 T 3246
Score = 145 (56.1 bits), Expect = 1.7e-12, Sum P(3) = 1.7e-12
Identities = 44/156 (28%), Positives = 79/156 (50%)
Query: 308 GALLTFGWGLY--GQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYV 364
G+ +GWG GQ G G +++ P+ +L ++ Q+ G ++ +G++Y
Sbjct: 3873 GSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYA 3931
Query: 365 FGGNQFGQLGTGVDQAENVPKLLETPILESKRAKV-VSCGARHSAVLTEDGQVLSWGWNK 423
G G+LG G ++ + P LLE+ I KV V+ G +H L+ +G+V SWG +
Sbjct: 3932 TGYGAGGRLGVGGTESVSTPTLLES-IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 3990
Query: 424 YGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHT 458
G+LG G+ + P ++ + G ++A G H+
Sbjct: 3991 DGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHS 4026
Score = 121 (47.7 bits), Expect = 1.4e-21, Sum P(3) = 1.4e-21
Identities = 29/77 (37%), Positives = 40/77 (51%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAG 112
VC CG F+LA ++SG + TWG D + S H P+ +V A G
Sbjct: 3128 VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVG 3186
Query: 113 WAHCVSVTEAGEVYTWG 129
HC++VT+AG+VY WG
Sbjct: 3187 ALHCLAVTDAGQVYAWG 3203
Score = 115 (45.5 bits), Expect = 3.1e-21, Sum P(2) = 3.1e-21
Identities = 30/98 (30%), Positives = 52/98 (53%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 569 DVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 627
Query: 112 GWAHCVSVTEAGEVYTWGWRE-C--VPSAKVTRDFGSA 146
G HC+++TE EV++WG + C + +VT+ SA
Sbjct: 628 GSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPSA 665
Score = 110 (43.8 bits), Expect = 2.9e-19, Sum P(4) = 2.9e-19
Identities = 37/113 (32%), Positives = 53/113 (46%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWK--DV-CGGGCGFALATSESGKLITWGS 77
+Y WG G S IP + G K DV CG G LA +E+G++ +WG
Sbjct: 483 LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGD 542
Query: 78 ADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
D G+ G G +TP+ + VVK G V++T+ G+VY+WG
Sbjct: 543 GD-YGKLG-RGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWG 593
Score = 110 (43.8 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 30/77 (38%), Positives = 39/77 (50%)
Query: 55 VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT--EASVVKAAAG 112
V GG LA S G++ +WG A+D G+ L G P + + VV AAG
Sbjct: 3967 VNSGG-KHCLALSSEGEVYSWGEAED-GK--LGHGNRSPCDRPRVIESLRGTEVVDVAAG 4022
Query: 113 WAHCVSVTEAGEVYTWG 129
AH VT AG++YTWG
Sbjct: 4023 GAHSACVTAAGDLYTWG 4039
Score = 100 (40.3 bits), Expect = 1.7e-13, Sum P(3) = 1.7e-13
Identities = 28/95 (29%), Positives = 43/95 (45%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 2955 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3013
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ A G +H ++T +GE+YTWG E
Sbjct: 3014 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3048
Score = 97 (39.2 bits), Expect = 1.7e-07, Sum P(3) = 1.7e-07
Identities = 34/121 (28%), Positives = 60/121 (49%)
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGARHSAV 409
W T+ G +Y +G N GQLG G++ A+ VP E L + R + G +
Sbjct: 3867 W-TLSAGGSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEA--LAALRPVQLIGGEQTLFA 3922
Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI--HGFLPR-NIACGWWHTLLLAETTQ 466
+T DG++ + G+ G+LG+G + + P+L+ H F+ + + G H L L+ +
Sbjct: 3923 VTADGKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 3982
Query: 467 I 467
+
Sbjct: 3983 V 3983
Score = 94 (38.1 bits), Expect = 3.4e-07, Sum P(3) = 3.4e-07
Identities = 24/74 (32%), Positives = 37/74 (50%)
Query: 284 GKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQV 343
G G+ + IA G H ++ G + T+G GQ G G+TN RP ++L +V
Sbjct: 4168 GLQGKKVIA-IATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKV 4226
Query: 344 EQIAAGLWHTVCIS 357
++A G HT+ S
Sbjct: 4227 NRVACGSAHTLAWS 4240
Score = 91 (37.1 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 33/113 (29%), Positives = 45/113 (39%)
Query: 22 VYMWG---YLPGTSPEKSPILSPIPARLCGGDSWKDV-CGGGCGFALATSESGKLITWGS 77
+Y WG Y + L P G DV CG G L ++ + +WG
Sbjct: 4035 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGD 4094
Query: 78 ADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
D G+ G G + P T VVK G V++T++G VYTWG
Sbjct: 4095 GD-YGKLG-RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWG 4145
Score = 73 (30.8 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 26/75 (34%), Positives = 39/75 (52%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGET-P--EPFPLPT----EAS--VVKAAAGWA 114
LA + +G++ +WG D G+ G HG+T P EP + +A VV A G
Sbjct: 419 LALAATGEVYSWGCGDG-GRL----G-HGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 472
Query: 115 HCVSVTEAGEVYTWG 129
+ ++T GE+YTWG
Sbjct: 473 YSAAITAEGELYTWG 487
Score = 71 (30.1 bits), Expect = 5.3e-14, Sum P(3) = 5.3e-14
Identities = 30/118 (25%), Positives = 46/118 (38%)
Query: 22 VYMWGY-----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWG 76
+Y WG+ L G K + P P + GG T++ GKL G
Sbjct: 3877 IYGWGHNHRGQLGGIEGAKVKV--PTPCEALAALRPVQLIGGEQTLFAVTAD-GKLYATG 3933
Query: 77 SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA--AGWAHCVSVTEAGEVYTWGWRE 132
G+ + + TP + K A +G HC++++ GEVY+WG E
Sbjct: 3934 YGAG-GRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 3990
Score = 70 (29.7 bits), Expect = 2.4e-16, Sum P(3) = 2.4e-16
Identities = 20/75 (26%), Positives = 33/75 (44%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAAGWA 114
CG LA ++ G + +WG D G+ G G P+ V + G
Sbjct: 3079 CGSRDAQTLALTDEGLVFSWGDGDF-GKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQ 3136
Query: 115 HCVSVTEAGEVYTWG 129
+++T++G V+TWG
Sbjct: 3137 FSLALTKSGVVWTWG 3151
Score = 57 (25.1 bits), Expect = 3.9e-09, Sum P(3) = 3.9e-09
Identities = 21/81 (25%), Positives = 33/81 (40%)
Query: 49 GDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVK 108
G+S + G A + K+ WG +D+ Q G + P + +VV+
Sbjct: 2859 GNSGSLIRKKAAGLESAATIRTKVFVWG-LNDKDQLGGLKGSKIKVPSFSETLSALNVVQ 2917
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
A G +VT G+VY G
Sbjct: 2918 VAGGSKSLFAVTVEGKVYACG 2938
Score = 54 (24.1 bits), Expect = 4.1e-21, Sum P(2) = 4.1e-21
Identities = 18/52 (34%), Positives = 27/52 (51%)
Query: 82 GQSYLTSGKHGETPEPFPLPTEAS--VVKAAA--GWAHCVSVTEAGEVYTWG 129
G+ Y T + +T P + AS +VK AA H +++ GEVY+WG
Sbjct: 381 GRVY-TQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWG 431
Score = 49 (22.3 bits), Expect = 3.9e-13, Sum P(4) = 3.9e-13
Identities = 15/62 (24%), Positives = 26/62 (41%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G LA +++G++ WG +D GQ + P + + A G +H V+
Sbjct: 3186 GALHCLAVTDAGQVYAWGD-NDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3244
Query: 119 VT 120
T
Sbjct: 3245 WT 3246
Score = 48 (22.0 bits), Expect = 1.4e-21, Sum P(3) = 1.4e-21
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTL 225
P LV G KIT+VA G H++
Sbjct: 3221 PTLVQGLEGQKITRVACGSSHSV 3243
Score = 45 (20.9 bits), Expect = 1.2e-20, Sum P(3) = 1.2e-20
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
G + P +V G KI VA G H L ++D
Sbjct: 3161 GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3195
Score = 42 (19.8 bits), Expect = 5.8e-21, Sum P(3) = 5.8e-21
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILS 228
+P L+ V I KVA +GG+H L LS
Sbjct: 3950 TPTLLESIQHVFIKKVAVNSGGKHCLALS 3978
Score = 42 (19.8 bits), Expect = 4.1e-19, Sum P(3) = 4.1e-19
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 202 SPC----LVTLNPGVKITKVAAGGRHT 224
SPC ++ G ++ VAAGG H+
Sbjct: 4000 SPCDRPRVIESLRGTEVVDVAAGGAHS 4026
Score = 41 (19.5 bits), Expect = 5.1e-15, Sum P(3) = 5.1e-15
Identities = 6/9 (66%), Positives = 6/9 (66%)
Query: 413 DGQVLSWGW 421
DG V WGW
Sbjct: 3617 DGSVNGWGW 3625
Score = 40 (19.1 bits), Expect = 2.0e-07, Sum P(3) = 2.0e-07
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 60 CGFALATSESGKLITWGSADDEGQSYLTSGKHGE 93
C T + T+G ++ GQS + G+ G+
Sbjct: 2653 CEACFKTRKHNTRHTFGRINEPGQSAIFCGRSGK 2686
Score = 39 (18.8 bits), Expect = 2.9e-19, Sum P(4) = 2.9e-19
Identities = 6/9 (66%), Positives = 6/9 (66%)
Query: 123 GEVYTWGWR 131
G V WGWR
Sbjct: 3618 GSVNGWGWR 3626
>UNIPROTKB|E1B782 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0032183 "SUMO binding" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0020037 "heme
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005743
GO:GO:0046872 GO:GO:0008270 GO:GO:0006281 GO:GO:0007283
GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
Gene3D:2.30.30.30 InterPro:IPR021097 InterPro:IPR014722
Pfam:PF11515 SUPFAM:SSF56204 GeneTree:ENSGT00700000104208
OMA:QLAFTRD InterPro:IPR006624 SMART:SM00706 EMBL:DAAA02003804
EMBL:DAAA02003805 IPI:IPI00713038 Ensembl:ENSBTAT00000018496
Uniprot:E1B782
Length = 4847
Score = 281 (104.0 bits), Expect = 4.2e-21, Sum P(2) = 4.2e-21
Identities = 66/188 (35%), Positives = 98/188 (52%)
Query: 283 SGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ 342
SGK +V IACG +SA +T G L T+G G YG+ GHGS+ D+ P + L ++
Sbjct: 546 SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 605
Query: 343 VEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVV 400
V +A G T+ ++ G+V+ +G +G+LG G PKL+E L+ V
Sbjct: 606 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK--LQDLDVVKV 663
Query: 401 SCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTL 459
CG++ S LT+DGQV SWG +LG G P L+ + G ++A G H L
Sbjct: 664 RCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCL 723
Query: 460 LLAETTQI 467
L E +++
Sbjct: 724 ALTEDSEV 731
Score = 228 (85.3 bits), Expect = 3.2e-21, Sum P(2) = 3.2e-21
Identities = 59/182 (32%), Positives = 99/182 (54%)
Query: 289 SYV-KEIAC--GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQ 345
SYV K++A GGRH+ +T G + ++G G G+ GH S + +P +L ++
Sbjct: 3055 SYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRD 3114
Query: 346 IAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGAR 405
IA G H+ ++ G +Y +G ++G+LG G + + PK+++ +L R V+CG+R
Sbjct: 3115 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK--VLLGHRVIQVACGSR 3172
Query: 406 --HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLA 462
+ LT++G V SWG +G+LG G S NIP + ++G I CG +L L
Sbjct: 3173 DAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3232
Query: 463 ET 464
++
Sbjct: 3233 KS 3234
Score = 226 (84.6 bits), Expect = 1.5e-21, Sum P(3) = 1.5e-21
Identities = 54/180 (30%), Positives = 94/180 (52%)
Query: 290 YVKEIAC--GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA 347
++K++A GG+H ++ G + ++G G+ GHG+ + RP SL +V +A
Sbjct: 4051 FIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVA 4110
Query: 348 AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA--R 405
AG H+ C++ G +Y +G ++G+LG + + PKL+E L+ R V+CG+
Sbjct: 4111 AGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA--LQGHRVVDVACGSGDA 4168
Query: 406 HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAET 464
+ LT+D V SWG YG+LG G S +P + + G + CG ++ L ++
Sbjct: 4169 QTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4228
Score = 210 (79.0 bits), Expect = 1.1e-19, Sum P(3) = 1.1e-19
Identities = 53/172 (30%), Positives = 86/172 (50%)
Query: 291 VKEIACGG--RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
V ++ACG + +TD + ++G G YG+ G G ++ P SL + V ++
Sbjct: 4158 VVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 4217
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
G +V ++ G VY +G + +LG G D P+ ++ L+ K+ ++ G+ H
Sbjct: 4218 GSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG--LQGKKVIAIATGSLHCV 4275
Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTL 459
+EDG+V +WG N GQLG G + P LV + G +ACG HTL
Sbjct: 4276 CCSEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4327
Score = 208 (78.3 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 60/192 (31%), Positives = 91/192 (47%)
Query: 284 GKAGRSYVKEIA-CGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ 342
G A R+ VK A G H + G + ++G G G+ GHG T P S+ Q
Sbjct: 490 GLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ 549
Query: 343 ----VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAK 398
V IA G ++ I+ EG +Y +G +G+LG G + E +P L+ L+ +
Sbjct: 550 AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAG--LKGLKVI 607
Query: 399 VVSCGARHSAVL--TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGW 455
V+CG+ + L TE+GQV SWG YG+LG G S P L+ + + CG
Sbjct: 608 DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGS 667
Query: 456 WHTLLLAETTQI 467
++ L + Q+
Sbjct: 668 QFSVALTKDGQV 679
Score = 207 (77.9 bits), Expect = 2.3e-19, Sum P(3) = 2.3e-19
Identities = 53/162 (32%), Positives = 84/162 (51%)
Query: 297 GGRHSA-VVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHT 353
GG + VT G L G+G G+ G G T P+ S+ + ++++A +G H
Sbjct: 4005 GGEQTLFAVTADGKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHC 4064
Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
+ +S EG VY +G + G+LG G + P+++E+ L V+ G HSA +T
Sbjct: 4065 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES--LRGTEVVDVAAGGAHSACVTAA 4122
Query: 414 GQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACG 454
G + +WG +YG+LG DS D+ P LV + G ++ACG
Sbjct: 4123 GDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACG 4164
Score = 199 (75.1 bits), Expect = 5.9e-18, Sum P(2) = 5.9e-18
Identities = 53/172 (30%), Positives = 86/172 (50%)
Query: 291 VKEIACGGR--HSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
V ++ACG R + +TD G + ++G G +G+ G G + P L V QI
Sbjct: 3164 VIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIEC 3223
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
G ++ ++ G V+ +G + +LG G D P+++E L K+ V+ GA H
Sbjct: 3224 GAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG--LRGKKIVHVAVGALHCL 3281
Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTL 459
+T+ GQV +WG N +GQ G G + P+LV + G +ACG H++
Sbjct: 3282 AVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3333
Score = 199 (75.1 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 54/169 (31%), Positives = 86/169 (50%)
Query: 291 VKEIACGG--RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
V ++ACG + VT+ G + ++G G YG+ G G ++ P L D+ V ++
Sbjct: 606 VIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC 665
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
G +V ++ +G+VY +G +LG G ++ PKLLE L+ K+ V+ G+ H
Sbjct: 666 GSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG--LQGKKVIDVAAGSTHCL 723
Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNI---ACG 454
LTED +V SWG N Q + + PS +P G ++I ACG
Sbjct: 724 ALTEDSEVHSWGSNDQCQHFDTLRVTKPEPSALP--GLDTKHIVGIACG 770
Score = 188 (71.2 bits), Expect = 9.8e-17, Sum P(2) = 9.8e-17
Identities = 59/193 (30%), Positives = 94/193 (48%)
Query: 281 NSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG--QCGHGSTNDQLR-PSYASS 337
+ G +G S +++ A G +A + F WGL Q G G +++ PS++ +
Sbjct: 2946 DEKGNSG-SLIRKKAAGLESAATIRTK----VFVWGLNDKDQLG-GLKGSKIKVPSFSET 2999
Query: 338 LMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRA 397
L + V Q+A G ++VEG+VY G G+LG G+ VP + L S
Sbjct: 3000 LSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSG-TVPIPRQITALSSYVV 3058
Query: 398 KVVSC--GARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACG 454
K V+ G RH+ LT DG+V SWG G+LG ++ + P L+ + R+IACG
Sbjct: 3059 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACG 3118
Query: 455 WWHTLLLAETTQI 467
H+ L + ++
Sbjct: 3119 SSHSAALTSSGEL 3131
Score = 180 (68.4 bits), Expect = 5.4e-15, Sum P(3) = 5.4e-15
Identities = 39/121 (32%), Positives = 61/121 (50%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
V +I CG + S +T +G + T+G G Y + GHGS +P L ++ +A G
Sbjct: 3218 VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGA 3277
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
H + ++ G+VY +G N GQ G G P L++ LE ++ V+CG+ HS
Sbjct: 3278 LHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSVAW 3335
Query: 411 T 411
T
Sbjct: 3336 T 3336
Score = 145 (56.1 bits), Expect = 1.8e-12, Sum P(3) = 1.8e-12
Identities = 44/156 (28%), Positives = 79/156 (50%)
Query: 308 GALLTFGWGLY--GQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYV 364
G+ +GWG GQ G G +++ P+ +L ++ Q+ G ++ +G++Y
Sbjct: 3963 GSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYA 4021
Query: 365 FGGNQFGQLGTGVDQAENVPKLLETPILESKRAKV-VSCGARHSAVLTEDGQVLSWGWNK 423
G G+LG G ++ + P LLE+ I KV V+ G +H L+ +G+V SWG +
Sbjct: 4022 TGYGAGGRLGVGGTESVSTPTLLES-IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4080
Query: 424 YGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHT 458
G+LG G+ + P ++ + G ++A G H+
Sbjct: 4081 DGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHS 4116
Score = 121 (47.7 bits), Expect = 1.5e-21, Sum P(3) = 1.5e-21
Identities = 29/77 (37%), Positives = 40/77 (51%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAG 112
VC CG F+LA ++SG + TWG D + S H P+ +V A G
Sbjct: 3218 VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRGKKIVHVAVG 3276
Query: 113 WAHCVSVTEAGEVYTWG 129
HC++VT+AG+VY WG
Sbjct: 3277 ALHCLAVTDAGQVYAWG 3293
Score = 115 (45.5 bits), Expect = 3.2e-21, Sum P(2) = 3.2e-21
Identities = 30/98 (30%), Positives = 52/98 (53%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 659 DVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 717
Query: 112 GWAHCVSVTEAGEVYTWGWRE-C--VPSAKVTRDFGSA 146
G HC+++TE EV++WG + C + +VT+ SA
Sbjct: 718 GSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPSA 755
Score = 110 (43.8 bits), Expect = 3.1e-19, Sum P(4) = 3.1e-19
Identities = 37/113 (32%), Positives = 53/113 (46%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWK--DV-CGGGCGFALATSESGKLITWGS 77
+Y WG G S IP + G K DV CG G LA +E+G++ +WG
Sbjct: 573 LYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGD 632
Query: 78 ADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
D G+ G G +TP+ + VVK G V++T+ G+VY+WG
Sbjct: 633 GD-YGKLG-RGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWG 683
Score = 110 (43.8 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 30/77 (38%), Positives = 39/77 (50%)
Query: 55 VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT--EASVVKAAAG 112
V GG LA S G++ +WG A+D G+ L G P + + VV AAG
Sbjct: 4057 VNSGG-KHCLALSSEGEVYSWGEAED-GK--LGHGNRSPCDRPRVIESLRGTEVVDVAAG 4112
Query: 113 WAHCVSVTEAGEVYTWG 129
AH VT AG++YTWG
Sbjct: 4113 GAHSACVTAAGDLYTWG 4129
Score = 100 (40.3 bits), Expect = 1.8e-13, Sum P(3) = 1.8e-13
Identities = 28/95 (29%), Positives = 43/95 (45%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 3045 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3103
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ A G +H ++T +GE+YTWG E
Sbjct: 3104 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3138
Score = 97 (39.2 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 34/121 (28%), Positives = 60/121 (49%)
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGARHSAV 409
W T+ G +Y +G N GQLG G++ A+ VP E L + R + G +
Sbjct: 3957 W-TLSAGGSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEA--LAALRPVQLIGGEQTLFA 4012
Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI--HGFLPR-NIACGWWHTLLLAETTQ 466
+T DG++ + G+ G+LG+G + + P+L+ H F+ + + G H L L+ +
Sbjct: 4013 VTADGKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 4072
Query: 467 I 467
+
Sbjct: 4073 V 4073
Score = 94 (38.1 bits), Expect = 3.6e-07, Sum P(3) = 3.6e-07
Identities = 24/74 (32%), Positives = 37/74 (50%)
Query: 284 GKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQV 343
G G+ + IA G H ++ G + T+G GQ G G+TN RP ++L +V
Sbjct: 4258 GLQGKKVIA-IATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKV 4316
Query: 344 EQIAAGLWHTVCIS 357
++A G HT+ S
Sbjct: 4317 NRVACGSAHTLAWS 4330
Score = 91 (37.1 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 33/113 (29%), Positives = 45/113 (39%)
Query: 22 VYMWG---YLPGTSPEKSPILSPIPARLCGGDSWKDV-CGGGCGFALATSESGKLITWGS 77
+Y WG Y + L P G DV CG G L ++ + +WG
Sbjct: 4125 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGD 4184
Query: 78 ADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
D G+ G G + P T VVK G V++T++G VYTWG
Sbjct: 4185 GD-YGKLG-RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWG 4235
Score = 73 (30.8 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 26/75 (34%), Positives = 39/75 (52%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGET-P--EPFPLPT----EAS--VVKAAAGWA 114
LA + +G++ +WG D G+ G HG+T P EP + +A VV A G
Sbjct: 509 LALAATGEVYSWGCGDG-GRL----G-HGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562
Query: 115 HCVSVTEAGEVYTWG 129
+ ++T GE+YTWG
Sbjct: 563 YSAAITAEGELYTWG 577
Score = 71 (30.1 bits), Expect = 5.6e-14, Sum P(3) = 5.6e-14
Identities = 30/118 (25%), Positives = 46/118 (38%)
Query: 22 VYMWGY-----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWG 76
+Y WG+ L G K + P P + GG T++ GKL G
Sbjct: 3967 IYGWGHNHRGQLGGIEGAKVKV--PTPCEALAALRPVQLIGGEQTLFAVTAD-GKLYATG 4023
Query: 77 SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA--AGWAHCVSVTEAGEVYTWGWRE 132
G+ + + TP + K A +G HC++++ GEVY+WG E
Sbjct: 4024 YGAG-GRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4080
Score = 70 (29.7 bits), Expect = 2.5e-16, Sum P(3) = 2.5e-16
Identities = 20/75 (26%), Positives = 33/75 (44%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAAGWA 114
CG LA ++ G + +WG D G+ G G P+ V + G
Sbjct: 3169 CGSRDAQTLALTDEGLVFSWGDGDF-GKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQ 3226
Query: 115 HCVSVTEAGEVYTWG 129
+++T++G V+TWG
Sbjct: 3227 FSLALTKSGVVWTWG 3241
Score = 57 (25.1 bits), Expect = 4.1e-09, Sum P(3) = 4.1e-09
Identities = 21/81 (25%), Positives = 33/81 (40%)
Query: 49 GDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVK 108
G+S + G A + K+ WG +D+ Q G + P + +VV+
Sbjct: 2949 GNSGSLIRKKAAGLESAATIRTKVFVWG-LNDKDQLGGLKGSKIKVPSFSETLSALNVVQ 3007
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
A G +VT G+VY G
Sbjct: 3008 VAGGSKSLFAVTVEGKVYACG 3028
Score = 54 (24.1 bits), Expect = 4.2e-21, Sum P(2) = 4.2e-21
Identities = 18/52 (34%), Positives = 27/52 (51%)
Query: 82 GQSYLTSGKHGETPEPFPLPTEAS--VVKAAA--GWAHCVSVTEAGEVYTWG 129
G+ Y T + +T P + AS +VK AA H +++ GEVY+WG
Sbjct: 471 GRVY-TQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWG 521
Score = 49 (22.3 bits), Expect = 4.2e-13, Sum P(4) = 4.2e-13
Identities = 15/62 (24%), Positives = 26/62 (41%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G LA +++G++ WG +D GQ + P + + A G +H V+
Sbjct: 3276 GALHCLAVTDAGQVYAWGD-NDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3334
Query: 119 VT 120
T
Sbjct: 3335 WT 3336
Score = 48 (22.0 bits), Expect = 1.5e-21, Sum P(3) = 1.5e-21
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTL 225
P LV G KIT+VA G H++
Sbjct: 3311 PTLVQGLEGQKITRVACGSSHSV 3333
Score = 45 (20.9 bits), Expect = 1.3e-20, Sum P(3) = 1.3e-20
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
G + P +V G KI VA G H L ++D
Sbjct: 3251 GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3285
Score = 42 (19.8 bits), Expect = 6.2e-21, Sum P(3) = 6.2e-21
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILS 228
+P L+ V I KVA +GG+H L LS
Sbjct: 4040 TPTLLESIQHVFIKKVAVNSGGKHCLALS 4068
Score = 42 (19.8 bits), Expect = 4.4e-19, Sum P(3) = 4.4e-19
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 202 SPC----LVTLNPGVKITKVAAGGRHT 224
SPC ++ G ++ VAAGG H+
Sbjct: 4090 SPCDRPRVIESLRGTEVVDVAAGGAHS 4116
Score = 41 (19.5 bits), Expect = 5.4e-15, Sum P(3) = 5.4e-15
Identities = 6/9 (66%), Positives = 6/9 (66%)
Query: 413 DGQVLSWGW 421
DG V WGW
Sbjct: 3707 DGSVNGWGW 3715
Score = 40 (19.1 bits), Expect = 2.1e-07, Sum P(3) = 2.1e-07
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 60 CGFALATSESGKLITWGSADDEGQSYLTSGKHGE 93
C T + T+G ++ GQS + G+ G+
Sbjct: 2743 CEACFKTRKHNTRHTFGRINEPGQSAIFCGRSGK 2776
Score = 39 (18.8 bits), Expect = 3.1e-19, Sum P(4) = 3.1e-19
Identities = 6/9 (66%), Positives = 6/9 (66%)
Query: 123 GEVYTWGWR 131
G V WGWR
Sbjct: 3708 GSVNGWGWR 3716
>UNIPROTKB|E1BW48 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0020037
"heme binding" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] [GO:0032183 "SUMO binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR009060 InterPro:IPR010606
Pfam:PF00173 Pfam:PF00569 Pfam:PF06701 PROSITE:PS01357
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS51416
SMART:SM00119 SMART:SM00291 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005743 GO:GO:0046872 GO:GO:0008270
GO:GO:0006281 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 SUPFAM:SSF46934 Gene3D:2.30.30.30
InterPro:IPR021097 InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 OMA:QLAFTRD EMBL:AADN02017653
IPI:IPI00571031 Ensembl:ENSGALT00000027018 ArrayExpress:E1BW48
Uniprot:E1BW48
Length = 4841
Score = 275 (101.9 bits), Expect = 4.8e-20, Sum P(2) = 4.8e-20
Identities = 65/188 (34%), Positives = 98/188 (52%)
Query: 283 SGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ 342
SGK +V IACG +SA +T G L T+G G YG+ GHGS+ DQ P + L ++
Sbjct: 546 SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLK 605
Query: 343 VEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVV 400
V ++ G T+ ++ G+V+ +G +G+LG G PKL+E L+ V
Sbjct: 606 VIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK--LQDLDIVKV 663
Query: 401 SCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTL 459
CG++ S LT+DGQV +WG +LG G P L+ + G ++A G H L
Sbjct: 664 RCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCL 723
Query: 460 LLAETTQI 467
L E +++
Sbjct: 724 ALTEDSEV 731
Score = 228 (85.3 bits), Expect = 2.7e-20, Sum P(4) = 2.7e-20
Identities = 58/179 (32%), Positives = 97/179 (54%)
Query: 291 VKEIAC--GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
VK++A GGRH+ +T G + ++G G G+ GH S + +P +L ++ IA
Sbjct: 3051 VKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIAC 3110
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGAR--H 406
G H+ I+ G +Y +G ++G+LG G + + PK+++ +L R V+CG+R
Sbjct: 3111 GSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK--VLLGHRVIQVACGSRDAQ 3168
Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAET 464
+ LT++G V SWG +G+LG G S NIP + ++G I CG +L L ++
Sbjct: 3169 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 3227
Score = 227 (85.0 bits), Expect = 3.0e-21, Sum P(3) = 3.0e-21
Identities = 52/153 (33%), Positives = 85/153 (55%)
Query: 290 YVKEIAC--GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA 347
++K++A GG+H ++ G + ++G G+ GHG+ + RP SL I+V IA
Sbjct: 4043 FIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIA 4102
Query: 348 AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA--R 405
AG H+ CI+ G ++ +G ++G+LG G + + PKL+E L+ R ++CG+
Sbjct: 4103 AGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEA--LQGYRVIDIACGSGDA 4160
Query: 406 HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP 438
+ LT+D V SWG YG+LG G S +P
Sbjct: 4161 QTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVP 4193
Score = 217 (81.4 bits), Expect = 6.8e-20, Sum P(4) = 6.8e-20
Identities = 54/162 (33%), Positives = 86/162 (53%)
Query: 297 GGRHSA-VVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHT 353
GG + VT G L G+G G+ G G T P+ S+ + ++++A +G H
Sbjct: 3997 GGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHC 4056
Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
+ +S EG VY +G + G+LG G + P+++E+ L ++ G HSA +T
Sbjct: 4057 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES--LRGIEVVDIAAGGAHSACITAA 4114
Query: 414 GQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACG 454
G + +WG +YG+LG GDS D+ P LV + G+ +IACG
Sbjct: 4115 GDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACG 4156
Score = 210 (79.0 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 60/190 (31%), Positives = 92/190 (48%)
Query: 286 AGRSYVKEIA-CGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ-- 342
A R+ VK A G H ++ G + ++G G G+ GHG T P S+L Q
Sbjct: 492 ASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAG 551
Query: 343 --VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVV 400
V IA G ++ I+ EG +Y +G +G+LG G + + +P L+ L+ + V
Sbjct: 552 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTG--LKGLKVIDV 609
Query: 401 SCGARHSAVL--TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWH 457
SCG+ + L TE+GQV SWG YG+LG G S P L+ + + CG
Sbjct: 610 SCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQF 669
Query: 458 TLLLAETTQI 467
++ L + Q+
Sbjct: 670 SIALTKDGQV 679
Score = 209 (78.6 bits), Expect = 5.8e-19, Sum P(4) = 5.8e-19
Identities = 56/174 (32%), Positives = 87/174 (50%)
Query: 291 VKEIACGG--RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
V +IACG + +TD + ++G G YG+ G G ++ P SL D+ V ++
Sbjct: 4150 VIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTDLGVVKVEC 4209
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
G +V ++ G VY +G + +LG G D P+ ++ L+ K+ ++ G+ H
Sbjct: 4210 GSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG--LQGKKVIAIATGSLHCV 4267
Query: 409 VLTEDG--QVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTL 459
TEDG +V +WG N GQLG G + P LV + G +ACG HTL
Sbjct: 4268 CCTEDGLGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTL 4321
Score = 202 (76.2 bits), Expect = 3.1e-17, Sum P(4) = 3.1e-17
Identities = 53/172 (30%), Positives = 86/172 (50%)
Query: 291 VKEIACGGR--HSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
V ++ACG R + +TD G + ++G G +G+ G G + P L V QI
Sbjct: 3157 VIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIEC 3216
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
G ++ ++ G V+ +G + +LG G D P+++E L K+ V+ GA H
Sbjct: 3217 GAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEG--LRGKKIVHVAVGALHCL 3274
Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTL 459
+T+ GQV +WG N +GQ G G + P+LV + G +ACG H++
Sbjct: 3275 AVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3326
Score = 194 (73.4 bits), Expect = 7.2e-14, Sum P(2) = 7.2e-14
Identities = 50/169 (29%), Positives = 85/169 (50%)
Query: 291 VKEIACGG--RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
V +++CG + VT+ G + ++G G YG+ G G ++ P L D+ + ++
Sbjct: 606 VIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRC 665
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
G ++ ++ +G+VY +G +LG G ++ PKLLE L+ K+ V+ G+ H
Sbjct: 666 GSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEG--LKGKKVIDVAAGSTHCL 723
Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNI---ACG 454
LTED +V SWG N Q D++ P + G ++I ACG
Sbjct: 724 ALTEDSEVHSWGSND--QCQHFDTLRITKPEPAALPGLDTKHIVGIACG 770
Score = 183 (69.5 bits), Expect = 9.7e-16, Sum P(3) = 9.7e-16
Identities = 59/203 (29%), Positives = 95/203 (46%)
Query: 272 PLLVRQGSVNSSGKAGR-SYVKEIACGGRHSAVVTDAGALLTFGWGLYG--QCGHGSTND 328
P L KA S V++ A G +A + F WGL Q G G
Sbjct: 2928 PFLASDNEEEDDDKANTGSLVRKKAAGLESAATIRTK----VFVWGLNDKDQLG-GLKGS 2982
Query: 329 QLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKL 386
+++ PS++ +L + V Q+A G ++VEG+VY G G+LG G+ +P+
Sbjct: 2983 KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQ 3042
Query: 387 LETPILESKRAKV-VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IH 444
+ T + KV V G RH+ LT DG++ SWG G+LG ++ + P L+ +
Sbjct: 3043 I-TALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALK 3101
Query: 445 GFLPRNIACGWWHTLLLAETTQI 467
R+IACG H+ + + ++
Sbjct: 3102 TKRIRDIACGSSHSAAITSSGEL 3124
Score = 177 (67.4 bits), Expect = 3.0e-14, Sum P(5) = 3.0e-14
Identities = 38/121 (31%), Positives = 61/121 (50%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
V +I CG + S +T +G + T+G G Y + GHG+ +P L ++ +A G
Sbjct: 3211 VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGA 3270
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
H + ++ G+VY +G N GQ G G P L++ LE ++ V+CG+ HS
Sbjct: 3271 LHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSVAW 3328
Query: 411 T 411
T
Sbjct: 3329 T 3329
Score = 148 (57.2 bits), Expect = 4.3e-12, Sum P(4) = 4.3e-12
Identities = 45/156 (28%), Positives = 79/156 (50%)
Query: 308 GALLTFGWGLY--GQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYV 364
G+ +GWG GQ G G +++ P+ +L ++ Q+ G ++ +G++Y
Sbjct: 3955 GSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA 4013
Query: 365 FGGNQFGQLGTGVDQAENVPKLLETPILESKRAKV-VSCGARHSAVLTEDGQVLSWGWNK 423
G G+LG G ++ + P LLE+ I KV V+ G +H L+ +G+V SWG +
Sbjct: 4014 TGYGAGGRLGIGGTESVSTPTLLES-IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4072
Query: 424 YGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHT 458
G+LG G+ + P ++ + G +IA G H+
Sbjct: 4073 DGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHS 4108
Score = 118 (46.6 bits), Expect = 1.1e-20, Sum P(4) = 1.1e-20
Identities = 25/78 (32%), Positives = 43/78 (55%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
D+ CG F++A ++ G++ TWG D++ + T +H P+ V+ AA
Sbjct: 659 DIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTE-EHVRYPKLLEGLKGKKVIDVAA 717
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 718 GSTHCLALTEDSEVHSWG 735
Score = 117 (46.2 bits), Expect = 3.0e-21, Sum P(3) = 3.0e-21
Identities = 28/77 (36%), Positives = 39/77 (50%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAG 112
VC CG F+LA ++SG + TWG D + T H P+ +V A G
Sbjct: 3211 VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTD-VHVRKPQVVEGLRGKKIVHVAVG 3269
Query: 113 WAHCVSVTEAGEVYTWG 129
HC++VT+ G+VY WG
Sbjct: 3270 ALHCLAVTDTGQVYAWG 3286
Score = 111 (44.1 bits), Expect = 1.0e-19, Sum P(3) = 1.0e-19
Identities = 36/113 (31%), Positives = 53/113 (46%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWK--DV-CGGGCGFALATSESGKLITWGS 77
+Y WG G S IP + G K DV CG G LA +E+G++ +WG
Sbjct: 573 LYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGD 632
Query: 78 ADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
D G+ G G +TP+ + +VK G +++T+ G+VYTWG
Sbjct: 633 GD-YGKLG-RGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWG 683
Score = 110 (43.8 bits), Expect = 0.00050, Sum P(3) = 0.00050
Identities = 32/118 (27%), Positives = 56/118 (47%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAG 349
+ ++ CG + S +T G + T+G G + GHG T + +R P L +V +AAG
Sbjct: 660 IVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHG-TEEHVRYPKLLEGLKGKKVIDVAAG 718
Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHS 407
H + ++ + V+ +G N Q + + P L P L++K ++CG S
Sbjct: 719 STHCLALTEDSEVHSWGSNDQCQHFDTLRITKPEPAAL--PGLDTKHIVGIACGPAQS 774
Score = 103 (41.3 bits), Expect = 3.1e-17, Sum P(3) = 3.1e-17
Identities = 28/77 (36%), Positives = 39/77 (50%)
Query: 55 VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT--EASVVKAAAG 112
V GG LA S G++ +WG A+D G+ L G P + + VV AAG
Sbjct: 4049 VNSGG-KHCLALSSEGEVYSWGEAED-GK--LGHGNRSPCDRPRVIESLRGIEVVDIAAG 4104
Query: 113 WAHCVSVTEAGEVYTWG 129
AH +T AG+++TWG
Sbjct: 4105 GAHSACITAAGDLFTWG 4121
Score = 103 (41.3 bits), Expect = 1.9e-13, Sum P(3) = 1.9e-13
Identities = 27/95 (28%), Positives = 44/95 (46%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ ++ K G A+A + GK+ +WG DD G+ S + + P
Sbjct: 3038 PIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDD-GKLGHFSRMNCDKPRL 3096
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ A G +H ++T +GE+YTWG E
Sbjct: 3097 IEALKTKRIRDIACGSSHSAAITSSGELYTWGLGE 3131
Score = 98 (39.6 bits), Expect = 6.6e-07, Sum P(4) = 6.6e-07
Identities = 34/121 (28%), Positives = 60/121 (49%)
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGARHSAV 409
W T+ G +Y +G N GQLG G++ A+ VP E L + R + G +
Sbjct: 3949 W-TLSAGGSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEA--LATLRPVQLIGGEQTLFA 4004
Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI--HGFLPR-NIACGWWHTLLLAETTQ 466
+T DG++ + G+ G+LG+G + + P+L+ H F+ + + G H L L+ +
Sbjct: 4005 VTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 4064
Query: 467 I 467
+
Sbjct: 4065 V 4065
Score = 89 (36.4 bits), Expect = 4.9e-06, Sum P(4) = 4.9e-06
Identities = 24/76 (31%), Positives = 36/76 (47%)
Query: 284 GKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY--GQCGHGSTNDQLRPSYASSLMDI 341
G G+ + IA G H T+ G + WG GQ G G+TN RP ++L
Sbjct: 4250 GLQGKKVIA-IATGSLHCVCCTEDGLGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGK 4308
Query: 342 QVEQIAAGLWHTVCIS 357
++ ++A G HT+ S
Sbjct: 4309 KINRVACGSAHTLAWS 4324
Score = 81 (33.6 bits), Expect = 7.2e-14, Sum P(2) = 7.2e-14
Identities = 34/119 (28%), Positives = 54/119 (45%)
Query: 22 VYMWGYLPGTS---PEKSPILSP-IPARLCGGDSWKDVCGGGCG--FALATSESGKLITW 75
V+ WG G + P+ P + + L G + K V CG ++ A + G+L TW
Sbjct: 517 VFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVHIACGSTYSAAITAEGELYTW 576
Query: 76 GSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA-----AAGWAHCVSVTEAGEVYTWG 129
G + G+ L G + P L T +K +G A ++VTE G+V++WG
Sbjct: 577 GRGN-YGR--LGHGSSEDQTIPM-LVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWG 631
Score = 76 (31.8 bits), Expect = 4.2e-10, Sum P(5) = 4.2e-10
Identities = 27/75 (36%), Positives = 39/75 (52%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGET-P--EPFPLPT----EAS--VVKAAAGWA 114
LA S +G++ +WG D G+ G HG+T P EP + +A VV A G
Sbjct: 509 LALSANGEVFSWGCGDG-GRL----G-HGDTVPLEEPKLISALSGKQAGKHVVHIACGST 562
Query: 115 HCVSVTEAGEVYTWG 129
+ ++T GE+YTWG
Sbjct: 563 YSAAITAEGELYTWG 577
Score = 71 (30.1 bits), Expect = 3.6e-14, Sum P(3) = 3.6e-14
Identities = 22/77 (28%), Positives = 33/77 (42%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA--AGWAH 115
GG A + GKL G G+ + + TP + K A +G H
Sbjct: 3997 GGEQTLFAVTADGKLYATGYGAG-GRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKH 4055
Query: 116 CVSVTEAGEVYTWGWRE 132
C++++ GEVY+WG E
Sbjct: 4056 CLALSSEGEVYSWGEAE 4072
Score = 70 (29.7 bits), Expect = 2.0e-16, Sum P(3) = 2.0e-16
Identities = 20/75 (26%), Positives = 33/75 (44%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAAGWA 114
CG LA ++ G + +WG D G+ G G P+ V + G
Sbjct: 3162 CGSRDAQTLALTDEGLVFSWGDGDF-GKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQ 3219
Query: 115 HCVSVTEAGEVYTWG 129
+++T++G V+TWG
Sbjct: 3220 FSLALTKSGVVWTWG 3234
Score = 70 (29.7 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 34/118 (28%), Positives = 49/118 (41%)
Query: 22 VYMWGYLPGTS---PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSA 78
VY WG +SP P G D+ GG A T+ +G L TWG
Sbjct: 4065 VYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITA-AGDLFTWG-- 4121
Query: 79 DDEGQSYLTSGKHGETPEPF-PLPTEA----SVVKAAAGW--AHCVSVTEAGEVYTWG 129
+G+ Y G HG++ + P EA V+ A G A + +T+ V++WG
Sbjct: 4122 --KGR-YGRLG-HGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWG 4175
Score = 56 (24.8 bits), Expect = 3.7e-08, Sum P(4) = 3.7e-08
Identities = 19/69 (27%), Positives = 29/69 (42%)
Query: 61 GFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVT 120
G A + K+ WG +D+ Q G + P + +VV+ A G +VT
Sbjct: 2954 GLESAATIRTKVFVWG-LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT 3012
Query: 121 EAGEVYTWG 129
G+VY G
Sbjct: 3013 VEGKVYACG 3021
Score = 54 (24.1 bits), Expect = 4.7e-08, Sum P(5) = 4.7e-08
Identities = 22/80 (27%), Positives = 32/80 (40%)
Query: 54 DVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGW 113
DV G LA +E ++ +WGS +D+ Q + T PEP LP
Sbjct: 714 DVAAGST-HCLALTEDSEVHSWGS-NDQCQHFDTL--RITKPEPAALP--------GLDT 761
Query: 114 AHCVSVTEAGEVYTWGWREC 133
H V + G ++ W C
Sbjct: 762 KHIVGIA-CGPAQSFAWSSC 780
Score = 51 (23.0 bits), Expect = 4.8e-20, Sum P(2) = 4.8e-20
Identities = 17/52 (32%), Positives = 29/52 (55%)
Query: 82 GQSYLTSGKHGETPEPFPLPTEAS--VVKAAA--GWAHCVSVTEAGEVYTWG 129
G+ Y T + +T P + + AS +VK AA H ++++ GEV++WG
Sbjct: 471 GRVY-TQAYNSDTLGPQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWG 521
Score = 49 (22.3 bits), Expect = 2.2e-13, Sum P(3) = 2.2e-13
Identities = 15/62 (24%), Positives = 26/62 (41%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G LA +++G++ WG +D GQ + P + + A G +H V+
Sbjct: 3269 GALHCLAVTDTGQVYAWGD-NDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3327
Query: 119 VT 120
T
Sbjct: 3328 WT 3329
Score = 48 (22.0 bits), Expect = 3.0e-21, Sum P(3) = 3.0e-21
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTL 225
P LV G KIT+VA G H++
Sbjct: 3304 PTLVQGLEGQKITRVACGSSHSV 3326
Score = 45 (20.9 bits), Expect = 1.2e-18, Sum P(4) = 1.2e-18
Identities = 9/31 (29%), Positives = 18/31 (58%)
Query: 202 SPC----LVTLNPGVKITKVAAGGRHTLILS 228
SPC ++ G+++ +AAGG H+ ++
Sbjct: 4082 SPCDRPRVIESLRGIEVVDIAAGGAHSACIT 4112
Score = 44 (20.5 bits), Expect = 1.1e-20, Sum P(4) = 1.1e-20
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
G + P +V G KI VA G H L ++D
Sbjct: 3244 GTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3278
Score = 43 (20.2 bits), Expect = 1.9e-18, Sum P(4) = 1.9e-18
Identities = 13/37 (35%), Positives = 17/37 (45%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGG--RHTLILSD 229
GD L P LV G ++ +A G TL L+D
Sbjct: 4131 GDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTD 4167
Score = 42 (19.8 bits), Expect = 1.1e-20, Sum P(4) = 1.1e-20
Identities = 15/53 (28%), Positives = 23/53 (43%)
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEE 175
GE+ GW +V D GS S++ GK L + PP+ + E+
Sbjct: 1898 GELGEDGW------IRVQWDTGSTNSYRMGKEGKYD-LKLAEPPPAAQPTTED 1943
Score = 42 (19.8 bits), Expect = 2.4e-18, Sum P(4) = 2.4e-18
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILS 228
+P L+ V I KVA +GG+H L LS
Sbjct: 4032 TPTLLESIQHVFIKKVAVNSGGKHCLALS 4060
Score = 41 (19.5 bits), Expect = 3.0e-14, Sum P(5) = 3.0e-14
Identities = 6/9 (66%), Positives = 6/9 (66%)
Query: 413 DGQVLSWGW 421
DG V WGW
Sbjct: 3699 DGSVNGWGW 3707
Score = 40 (19.1 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 30/109 (27%), Positives = 41/109 (37%)
Query: 130 WRECVPSAKVT---RDFGSAGSF---QKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
W E V ++ +F G + DST Q+A E+ +K+ EE T
Sbjct: 36 WNEMVKDGEIVYPGTEFTQNGELPPRKDDSTECQTASKKEEQNDKEKKDEEEAPP--PTY 93
Query: 184 SAREESENPASGDE--FFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
AR E+ G + L CL L VK + A T LS M
Sbjct: 94 RARSIVESWVWGKQPDVNELKECLHVL---VKEQQTLATQTATTALSAM 139
Score = 39 (18.8 bits), Expect = 2.7e-20, Sum P(4) = 2.7e-20
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 212 VKITKVAAGGRHTLILS 228
VK V +GGRH + L+
Sbjct: 3051 VKKVAVHSGGRHAMALT 3067
Score = 39 (18.8 bits), Expect = 1.0e-19, Sum P(3) = 1.0e-19
Identities = 6/9 (66%), Positives = 6/9 (66%)
Query: 123 GEVYTWGWR 131
G V WGWR
Sbjct: 3700 GSVNGWGWR 3708
Score = 38 (18.4 bits), Expect = 2.1e-06, Sum P(4) = 2.1e-06
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 60 CGFALATSESGKLITWGSADDEGQSYLTSGKHGE 93
C T + T+G ++ GQS + G+ G+
Sbjct: 2736 CETCFKTRKHNTRHTFGRINEPGQSPVFCGRSGK 2769
>UNIPROTKB|E1C8K2 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR009060 InterPro:IPR010606
Pfam:PF00173 Pfam:PF00569 Pfam:PF06701 PROSITE:PS01357
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS51416
SMART:SM00119 SMART:SM00291 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0046872 GO:GO:0008270 GO:GO:0020037 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
SUPFAM:SSF46934 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 EMBL:AADN02017653 IPI:IPI00818548
Ensembl:ENSGALT00000036596 ArrayExpress:E1C8K2 Uniprot:E1C8K2
Length = 4841
Score = 275 (101.9 bits), Expect = 4.8e-20, Sum P(2) = 4.8e-20
Identities = 65/188 (34%), Positives = 98/188 (52%)
Query: 283 SGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ 342
SGK +V IACG +SA +T G L T+G G YG+ GHGS+ DQ P + L ++
Sbjct: 546 SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLK 605
Query: 343 VEQIAAGLW--HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVV 400
V ++ G T+ ++ G+V+ +G +G+LG G PKL+E L+ V
Sbjct: 606 VIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK--LQDLDIVKV 663
Query: 401 SCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTL 459
CG++ S LT+DGQV +WG +LG G P L+ + G ++A G H L
Sbjct: 664 RCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCL 723
Query: 460 LLAETTQI 467
L E +++
Sbjct: 724 ALTEDSEV 731
Score = 228 (85.3 bits), Expect = 2.7e-20, Sum P(4) = 2.7e-20
Identities = 58/179 (32%), Positives = 97/179 (54%)
Query: 291 VKEIAC--GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
VK++A GGRH+ +T G + ++G G G+ GH S + +P +L ++ IA
Sbjct: 3051 VKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIAC 3110
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGAR--H 406
G H+ I+ G +Y +G ++G+LG G + + PK+++ +L R V+CG+R
Sbjct: 3111 GSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK--VLLGHRVIQVACGSRDAQ 3168
Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAET 464
+ LT++G V SWG +G+LG G S NIP + ++G I CG +L L ++
Sbjct: 3169 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 3227
Score = 227 (85.0 bits), Expect = 3.0e-21, Sum P(3) = 3.0e-21
Identities = 52/153 (33%), Positives = 85/153 (55%)
Query: 290 YVKEIAC--GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA 347
++K++A GG+H ++ G + ++G G+ GHG+ + RP SL I+V IA
Sbjct: 4043 FIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIA 4102
Query: 348 AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA--R 405
AG H+ CI+ G ++ +G ++G+LG G + + PKL+E L+ R ++CG+
Sbjct: 4103 AGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEA--LQGYRVIDIACGSGDA 4160
Query: 406 HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP 438
+ LT+D V SWG YG+LG G S +P
Sbjct: 4161 QTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVP 4193
Score = 217 (81.4 bits), Expect = 6.8e-20, Sum P(4) = 6.8e-20
Identities = 54/162 (33%), Positives = 86/162 (53%)
Query: 297 GGRHSA-VVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA--AGLWHT 353
GG + VT G L G+G G+ G G T P+ S+ + ++++A +G H
Sbjct: 3997 GGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHC 4056
Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
+ +S EG VY +G + G+LG G + P+++E+ L ++ G HSA +T
Sbjct: 4057 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES--LRGIEVVDIAAGGAHSACITAA 4114
Query: 414 GQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACG 454
G + +WG +YG+LG GDS D+ P LV + G+ +IACG
Sbjct: 4115 GDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACG 4156
Score = 210 (79.0 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 60/190 (31%), Positives = 92/190 (48%)
Query: 286 AGRSYVKEIA-CGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ-- 342
A R+ VK A G H ++ G + ++G G G+ GHG T P S+L Q
Sbjct: 492 ASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAG 551
Query: 343 --VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVV 400
V IA G ++ I+ EG +Y +G +G+LG G + + +P L+ L+ + V
Sbjct: 552 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTG--LKGLKVIDV 609
Query: 401 SCGARHSAVL--TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWH 457
SCG+ + L TE+GQV SWG YG+LG G S P L+ + + CG
Sbjct: 610 SCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQF 669
Query: 458 TLLLAETTQI 467
++ L + Q+
Sbjct: 670 SIALTKDGQV 679
Score = 209 (78.6 bits), Expect = 5.8e-19, Sum P(4) = 5.8e-19
Identities = 56/174 (32%), Positives = 87/174 (50%)
Query: 291 VKEIACGG--RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
V +IACG + +TD + ++G G YG+ G G ++ P SL D+ V ++
Sbjct: 4150 VIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTDLGVVKVEC 4209
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
G +V ++ G VY +G + +LG G D P+ ++ L+ K+ ++ G+ H
Sbjct: 4210 GSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG--LQGKKVIAIATGSLHCV 4267
Query: 409 VLTEDG--QVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTL 459
TEDG +V +WG N GQLG G + P LV + G +ACG HTL
Sbjct: 4268 CCTEDGLGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTL 4321
Score = 202 (76.2 bits), Expect = 3.1e-17, Sum P(4) = 3.1e-17
Identities = 53/172 (30%), Positives = 86/172 (50%)
Query: 291 VKEIACGGR--HSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
V ++ACG R + +TD G + ++G G +G+ G G + P L V QI
Sbjct: 3157 VIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIEC 3216
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
G ++ ++ G V+ +G + +LG G D P+++E L K+ V+ GA H
Sbjct: 3217 GAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEG--LRGKKIVHVAVGALHCL 3274
Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTL 459
+T+ GQV +WG N +GQ G G + P+LV + G +ACG H++
Sbjct: 3275 AVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3326
Score = 194 (73.4 bits), Expect = 7.2e-14, Sum P(2) = 7.2e-14
Identities = 50/169 (29%), Positives = 85/169 (50%)
Query: 291 VKEIACGG--RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
V +++CG + VT+ G + ++G G YG+ G G ++ P L D+ + ++
Sbjct: 606 VIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRC 665
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
G ++ ++ +G+VY +G +LG G ++ PKLLE L+ K+ V+ G+ H
Sbjct: 666 GSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEG--LKGKKVIDVAAGSTHCL 723
Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNI---ACG 454
LTED +V SWG N Q D++ P + G ++I ACG
Sbjct: 724 ALTEDSEVHSWGSND--QCQHFDTLRITKPEPAALPGLDTKHIVGIACG 770
Score = 183 (69.5 bits), Expect = 9.7e-16, Sum P(3) = 9.7e-16
Identities = 59/203 (29%), Positives = 95/203 (46%)
Query: 272 PLLVRQGSVNSSGKAGR-SYVKEIACGGRHSAVVTDAGALLTFGWGLYG--QCGHGSTND 328
P L KA S V++ A G +A + F WGL Q G G
Sbjct: 2928 PFLASDNEEEDDDKANTGSLVRKKAAGLESAATIRTK----VFVWGLNDKDQLG-GLKGS 2982
Query: 329 QLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKL 386
+++ PS++ +L + V Q+A G ++VEG+VY G G+LG G+ +P+
Sbjct: 2983 KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQ 3042
Query: 387 LETPILESKRAKV-VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IH 444
+ T + KV V G RH+ LT DG++ SWG G+LG ++ + P L+ +
Sbjct: 3043 I-TALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALK 3101
Query: 445 GFLPRNIACGWWHTLLLAETTQI 467
R+IACG H+ + + ++
Sbjct: 3102 TKRIRDIACGSSHSAAITSSGEL 3124
Score = 177 (67.4 bits), Expect = 3.0e-14, Sum P(5) = 3.0e-14
Identities = 38/121 (31%), Positives = 61/121 (50%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
V +I CG + S +T +G + T+G G Y + GHG+ +P L ++ +A G
Sbjct: 3211 VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGA 3270
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
H + ++ G+VY +G N GQ G G P L++ LE ++ V+CG+ HS
Sbjct: 3271 LHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG--LEGQKITRVACGSSHSVAW 3328
Query: 411 T 411
T
Sbjct: 3329 T 3329
Score = 148 (57.2 bits), Expect = 4.3e-12, Sum P(4) = 4.3e-12
Identities = 45/156 (28%), Positives = 79/156 (50%)
Query: 308 GALLTFGWGLY--GQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYV 364
G+ +GWG GQ G G +++ P+ +L ++ Q+ G ++ +G++Y
Sbjct: 3955 GSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYA 4013
Query: 365 FGGNQFGQLGTGVDQAENVPKLLETPILESKRAKV-VSCGARHSAVLTEDGQVLSWGWNK 423
G G+LG G ++ + P LLE+ I KV V+ G +H L+ +G+V SWG +
Sbjct: 4014 TGYGAGGRLGIGGTESVSTPTLLES-IQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4072
Query: 424 YGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHT 458
G+LG G+ + P ++ + G +IA G H+
Sbjct: 4073 DGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHS 4108
Score = 118 (46.6 bits), Expect = 1.1e-20, Sum P(4) = 1.1e-20
Identities = 25/78 (32%), Positives = 43/78 (55%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
D+ CG F++A ++ G++ TWG D++ + T +H P+ V+ AA
Sbjct: 659 DIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTE-EHVRYPKLLEGLKGKKVIDVAA 717
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 718 GSTHCLALTEDSEVHSWG 735
Score = 117 (46.2 bits), Expect = 3.0e-21, Sum P(3) = 3.0e-21
Identities = 28/77 (36%), Positives = 39/77 (50%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAG 112
VC CG F+LA ++SG + TWG D + T H P+ +V A G
Sbjct: 3211 VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTD-VHVRKPQVVEGLRGKKIVHVAVG 3269
Query: 113 WAHCVSVTEAGEVYTWG 129
HC++VT+ G+VY WG
Sbjct: 3270 ALHCLAVTDTGQVYAWG 3286
Score = 111 (44.1 bits), Expect = 1.0e-19, Sum P(3) = 1.0e-19
Identities = 36/113 (31%), Positives = 53/113 (46%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWK--DV-CGGGCGFALATSESGKLITWGS 77
+Y WG G S IP + G K DV CG G LA +E+G++ +WG
Sbjct: 573 LYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGD 632
Query: 78 ADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
D G+ G G +TP+ + +VK G +++T+ G+VYTWG
Sbjct: 633 GD-YGKLG-RGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWG 683
Score = 110 (43.8 bits), Expect = 0.00050, Sum P(3) = 0.00050
Identities = 32/118 (27%), Positives = 56/118 (47%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAG 349
+ ++ CG + S +T G + T+G G + GHG T + +R P L +V +AAG
Sbjct: 660 IVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHG-TEEHVRYPKLLEGLKGKKVIDVAAG 718
Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHS 407
H + ++ + V+ +G N Q + + P L P L++K ++CG S
Sbjct: 719 STHCLALTEDSEVHSWGSNDQCQHFDTLRITKPEPAAL--PGLDTKHIVGIACGPAQS 774
Score = 103 (41.3 bits), Expect = 3.1e-17, Sum P(3) = 3.1e-17
Identities = 28/77 (36%), Positives = 39/77 (50%)
Query: 55 VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT--EASVVKAAAG 112
V GG LA S G++ +WG A+D G+ L G P + + VV AAG
Sbjct: 4049 VNSGG-KHCLALSSEGEVYSWGEAED-GK--LGHGNRSPCDRPRVIESLRGIEVVDIAAG 4104
Query: 113 WAHCVSVTEAGEVYTWG 129
AH +T AG+++TWG
Sbjct: 4105 GAHSACITAAGDLFTWG 4121
Score = 103 (41.3 bits), Expect = 1.9e-13, Sum P(3) = 1.9e-13
Identities = 27/95 (28%), Positives = 44/95 (46%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ ++ K G A+A + GK+ +WG DD G+ S + + P
Sbjct: 3038 PIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDD-GKLGHFSRMNCDKPRL 3096
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ A G +H ++T +GE+YTWG E
Sbjct: 3097 IEALKTKRIRDIACGSSHSAAITSSGELYTWGLGE 3131
Score = 98 (39.6 bits), Expect = 6.6e-07, Sum P(4) = 6.6e-07
Identities = 34/121 (28%), Positives = 60/121 (49%)
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGARHSAV 409
W T+ G +Y +G N GQLG G++ A+ VP E L + R + G +
Sbjct: 3949 W-TLSAGGSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEA--LATLRPVQLIGGEQTLFA 4004
Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI--HGFLPR-NIACGWWHTLLLAETTQ 466
+T DG++ + G+ G+LG+G + + P+L+ H F+ + + G H L L+ +
Sbjct: 4005 VTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 4064
Query: 467 I 467
+
Sbjct: 4065 V 4065
Score = 89 (36.4 bits), Expect = 4.9e-06, Sum P(4) = 4.9e-06
Identities = 24/76 (31%), Positives = 36/76 (47%)
Query: 284 GKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY--GQCGHGSTNDQLRPSYASSLMDI 341
G G+ + IA G H T+ G + WG GQ G G+TN RP ++L
Sbjct: 4250 GLQGKKVIA-IATGSLHCVCCTEDGLGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGK 4308
Query: 342 QVEQIAAGLWHTVCIS 357
++ ++A G HT+ S
Sbjct: 4309 KINRVACGSAHTLAWS 4324
Score = 81 (33.6 bits), Expect = 7.2e-14, Sum P(2) = 7.2e-14
Identities = 34/119 (28%), Positives = 54/119 (45%)
Query: 22 VYMWGYLPGTS---PEKSPILSP-IPARLCGGDSWKDVCGGGCG--FALATSESGKLITW 75
V+ WG G + P+ P + + L G + K V CG ++ A + G+L TW
Sbjct: 517 VFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVHIACGSTYSAAITAEGELYTW 576
Query: 76 GSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA-----AAGWAHCVSVTEAGEVYTWG 129
G + G+ L G + P L T +K +G A ++VTE G+V++WG
Sbjct: 577 GRGN-YGR--LGHGSSEDQTIPM-LVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWG 631
Score = 76 (31.8 bits), Expect = 4.2e-10, Sum P(5) = 4.2e-10
Identities = 27/75 (36%), Positives = 39/75 (52%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGET-P--EPFPLPT----EAS--VVKAAAGWA 114
LA S +G++ +WG D G+ G HG+T P EP + +A VV A G
Sbjct: 509 LALSANGEVFSWGCGDG-GRL----G-HGDTVPLEEPKLISALSGKQAGKHVVHIACGST 562
Query: 115 HCVSVTEAGEVYTWG 129
+ ++T GE+YTWG
Sbjct: 563 YSAAITAEGELYTWG 577
Score = 71 (30.1 bits), Expect = 3.6e-14, Sum P(3) = 3.6e-14
Identities = 22/77 (28%), Positives = 33/77 (42%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA--AGWAH 115
GG A + GKL G G+ + + TP + K A +G H
Sbjct: 3997 GGEQTLFAVTADGKLYATGYGAG-GRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKH 4055
Query: 116 CVSVTEAGEVYTWGWRE 132
C++++ GEVY+WG E
Sbjct: 4056 CLALSSEGEVYSWGEAE 4072
Score = 70 (29.7 bits), Expect = 2.0e-16, Sum P(3) = 2.0e-16
Identities = 20/75 (26%), Positives = 33/75 (44%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAAGWA 114
CG LA ++ G + +WG D G+ G G P+ V + G
Sbjct: 3162 CGSRDAQTLALTDEGLVFSWGDGDF-GKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQ 3219
Query: 115 HCVSVTEAGEVYTWG 129
+++T++G V+TWG
Sbjct: 3220 FSLALTKSGVVWTWG 3234
Score = 70 (29.7 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 34/118 (28%), Positives = 49/118 (41%)
Query: 22 VYMWGYLPGTS---PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSA 78
VY WG +SP P G D+ GG A T+ +G L TWG
Sbjct: 4065 VYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITA-AGDLFTWG-- 4121
Query: 79 DDEGQSYLTSGKHGETPEPF-PLPTEA----SVVKAAAGW--AHCVSVTEAGEVYTWG 129
+G+ Y G HG++ + P EA V+ A G A + +T+ V++WG
Sbjct: 4122 --KGR-YGRLG-HGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWG 4175
Score = 56 (24.8 bits), Expect = 3.7e-08, Sum P(4) = 3.7e-08
Identities = 19/69 (27%), Positives = 29/69 (42%)
Query: 61 GFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVT 120
G A + K+ WG +D+ Q G + P + +VV+ A G +VT
Sbjct: 2954 GLESAATIRTKVFVWG-LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT 3012
Query: 121 EAGEVYTWG 129
G+VY G
Sbjct: 3013 VEGKVYACG 3021
Score = 54 (24.1 bits), Expect = 4.7e-08, Sum P(5) = 4.7e-08
Identities = 22/80 (27%), Positives = 32/80 (40%)
Query: 54 DVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGW 113
DV G LA +E ++ +WGS +D+ Q + T PEP LP
Sbjct: 714 DVAAGST-HCLALTEDSEVHSWGS-NDQCQHFDTL--RITKPEPAALP--------GLDT 761
Query: 114 AHCVSVTEAGEVYTWGWREC 133
H V + G ++ W C
Sbjct: 762 KHIVGIA-CGPAQSFAWSSC 780
Score = 51 (23.0 bits), Expect = 4.8e-20, Sum P(2) = 4.8e-20
Identities = 17/52 (32%), Positives = 29/52 (55%)
Query: 82 GQSYLTSGKHGETPEPFPLPTEAS--VVKAAA--GWAHCVSVTEAGEVYTWG 129
G+ Y T + +T P + + AS +VK AA H ++++ GEV++WG
Sbjct: 471 GRVY-TQAYNSDTLGPQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWG 521
Score = 49 (22.3 bits), Expect = 2.2e-13, Sum P(3) = 2.2e-13
Identities = 15/62 (24%), Positives = 26/62 (41%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G LA +++G++ WG +D GQ + P + + A G +H V+
Sbjct: 3269 GALHCLAVTDTGQVYAWGD-NDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3327
Query: 119 VT 120
T
Sbjct: 3328 WT 3329
Score = 48 (22.0 bits), Expect = 3.0e-21, Sum P(3) = 3.0e-21
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTL 225
P LV G KIT+VA G H++
Sbjct: 3304 PTLVQGLEGQKITRVACGSSHSV 3326
Score = 45 (20.9 bits), Expect = 1.2e-18, Sum P(4) = 1.2e-18
Identities = 9/31 (29%), Positives = 18/31 (58%)
Query: 202 SPC----LVTLNPGVKITKVAAGGRHTLILS 228
SPC ++ G+++ +AAGG H+ ++
Sbjct: 4082 SPCDRPRVIESLRGIEVVDIAAGGAHSACIT 4112
Score = 44 (20.5 bits), Expect = 1.1e-20, Sum P(4) = 1.1e-20
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
G + P +V G KI VA G H L ++D
Sbjct: 3244 GTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3278
Score = 43 (20.2 bits), Expect = 1.9e-18, Sum P(4) = 1.9e-18
Identities = 13/37 (35%), Positives = 17/37 (45%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGG--RHTLILSD 229
GD L P LV G ++ +A G TL L+D
Sbjct: 4131 GDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTD 4167
Score = 42 (19.8 bits), Expect = 1.1e-20, Sum P(4) = 1.1e-20
Identities = 15/53 (28%), Positives = 23/53 (43%)
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEE 175
GE+ GW +V D GS S++ GK L + PP+ + E+
Sbjct: 1898 GELGEDGW------IRVQWDTGSTNSYRMGKEGKYD-LKLAEPPPAAQPTTED 1943
Score = 42 (19.8 bits), Expect = 2.4e-18, Sum P(4) = 2.4e-18
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILS 228
+P L+ V I KVA +GG+H L LS
Sbjct: 4032 TPTLLESIQHVFIKKVAVNSGGKHCLALS 4060
Score = 41 (19.5 bits), Expect = 3.0e-14, Sum P(5) = 3.0e-14
Identities = 6/9 (66%), Positives = 6/9 (66%)
Query: 413 DGQVLSWGW 421
DG V WGW
Sbjct: 3699 DGSVNGWGW 3707
Score = 40 (19.1 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 30/109 (27%), Positives = 41/109 (37%)
Query: 130 WRECVPSAKVT---RDFGSAGSF---QKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
W E V ++ +F G + DST Q+A E+ +K+ EE T
Sbjct: 36 WNEMVKDGEIVYPGTEFTQNGELPPRKDDSTECQTASKKEEQNDKEKKDEEEAPP--PTY 93
Query: 184 SAREESENPASGDE--FFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
AR E+ G + L CL L VK + A T LS M
Sbjct: 94 RARSIVESWVWGKQPDVNELKECLHVL---VKEQQTLATQTATTALSAM 139
Score = 39 (18.8 bits), Expect = 2.7e-20, Sum P(4) = 2.7e-20
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 212 VKITKVAAGGRHTLILS 228
VK V +GGRH + L+
Sbjct: 3051 VKKVAVHSGGRHAMALT 3067
Score = 39 (18.8 bits), Expect = 1.0e-19, Sum P(3) = 1.0e-19
Identities = 6/9 (66%), Positives = 6/9 (66%)
Query: 123 GEVYTWGWR 131
G V WGWR
Sbjct: 3700 GSVNGWGWR 3708
Score = 38 (18.4 bits), Expect = 2.1e-06, Sum P(4) = 2.1e-06
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 60 CGFALATSESGKLITWGSADDEGQSYLTSGKHGE 93
C T + T+G ++ GQS + G+ G+
Sbjct: 2736 CETCFKTRKHNTRHTFGRINEPGQSPVFCGRSGK 2769
>UNIPROTKB|E1B8U7 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
OMA:ERPGAWF GeneTree:ENSGT00700000104312 EMBL:DAAA02052163
IPI:IPI00710464 UniGene:Bt.111664 Ensembl:ENSBTAT00000024803
NextBio:20875558 Uniprot:E1B8U7
Length = 377
Score = 168 (64.2 bits), Expect = 3.3e-21, Sum P(2) = 3.3e-21
Identities = 28/82 (34%), Positives = 51/82 (62%)
Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW 351
+ + G H+ ++ AG + ++G G +GQ GHG+ + P +L +++ ++AAG W
Sbjct: 162 RRLELGAEHALLLDAAGQVFSWGAGRHGQLGHGTLEAEPEPRLLEALQGLRMAEVAAGGW 221
Query: 352 HTVCISVEGRVYVFGGNQFGQL 373
H+VC+S G +Y++G N+ GQL
Sbjct: 222 HSVCLSETGDIYIWGWNESGQL 243
Score = 168 (64.2 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 35/98 (35%), Positives = 52/98 (53%)
Query: 332 PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
P Y ++ ++ G H + + G+V+ +G + GQLG G +AE P+LLE
Sbjct: 150 PFYRPLAPTLRARRLELGAEHALLLDAAGQVFSWGAGRHGQLGHGTLEAEPEPRLLEA-- 207
Query: 392 LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
L+ R V+ G HS L+E G + WGWN+ GQL L
Sbjct: 208 LQGLRMAEVAAGGWHSVCLSETGDIYIWGWNESGQLAL 245
Score = 154 (59.3 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 32/75 (42%), Positives = 43/75 (57%)
Query: 287 GRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMD--IQVE 344
G VK ++CG RH+AV+T G L T+GWG YGQ GH T RP +D +QV
Sbjct: 300 GSEAVK-VSCGSRHTAVLTRTGELYTWGWGKYGQLGHKDTTTLDRPCRVEYFVDKQLQVR 358
Query: 345 QIAAGLWHTVCISVE 359
++ G W+T +VE
Sbjct: 359 TVSCGPWNTYVYAVE 373
Score = 151 (58.2 bits), Expect = 3.3e-21, Sum P(2) = 3.3e-21
Identities = 34/82 (41%), Positives = 48/82 (58%)
Query: 384 PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP- 442
P LL+ + A VSCG+RH+AVLT G++ +WGW KYGQLG D+ + P V
Sbjct: 292 PALLD--LSPGSEAVKVSCGSRHTAVLTRTGELYTWGWGKYGQLGHKDTTTLDRPCRVEY 349
Query: 443 -IHGFLP-RNIACGWWHTLLLA 462
+ L R ++CG W+T + A
Sbjct: 350 FVDKQLQVRTVSCGPWNTYVYA 371
Score = 133 (51.9 bits), Expect = 8.9e-06, P = 8.9e-06
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 390 PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLP 448
P+ + RA+ + GA H+ +L GQV SWG ++GQLG G P L+ + G
Sbjct: 154 PLAPTLRARRLELGAEHALLLDAAGQVFSWGAGRHGQLGHGTLEAEPEPRLLEALQGLRM 213
Query: 449 RNIACGWWHTLLLAETTQI 467
+A G WH++ L+ET I
Sbjct: 214 AEVAAGGWHSVCLSETGDI 232
Score = 123 (48.4 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 38/120 (31%), Positives = 53/120 (44%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA---AAGWAH 115
G AL +G++ +WG A GQ L G PEP L + A A GW H
Sbjct: 167 GAEHALLLDAAGQVFSWG-AGRHGQ--LGHGTLEAEPEPRLLEALQGLRMAEVAAGGW-H 222
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEE 175
V ++E G++Y WGW E A T+ G K + G+ S L + + AGE+
Sbjct: 223 SVCLSETGDIYIWGWNESGQLALPTKSLAEDG---KTTAGEASGLEEDGSEVKRGSAGED 279
Score = 54 (24.1 bits), Expect = 1.5e-10, Sum P(3) = 1.5e-10
Identities = 11/27 (40%), Positives = 19/27 (70%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSD 229
P L+ G+++ +VAAGG H++ LS+
Sbjct: 202 PRLLEALQGLRMAEVAAGGWHSVCLSE 228
Score = 49 (22.3 bits), Expect = 1.5e-10, Sum P(3) = 1.5e-10
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 97 PF--PLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
PF PL + G H + + AG+V++WG
Sbjct: 150 PFYRPLAPTLRARRLELGAEHALLLDAAGQVFSWG 184
>MGI|MGI:1918580 [details] [associations]
symbol:Rcbtb1 "regulator of chromosome condensation (RCC1)
and BTB (POZ) domain containing protein 1" species:10090 "Mus
musculus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] InterPro:IPR000210 InterPro:IPR013069
Pfam:PF00651 PROSITE:PS50097 SMART:SM00225 MGI:MGI:1918580
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0006355 GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0007049 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GeneTree:ENSGT00700000104208 CTD:55213 HOGENOM:HOG000065752
HOVERGEN:HBG053261 KO:K11494 OrthoDB:EOG4MSCXX EMBL:AK033501
EMBL:AK088299 EMBL:BC067005 IPI:IPI00469440 RefSeq:NP_082040.2
UniGene:Mm.234195 ProteinModelPortal:Q6NXM2 SMR:Q6NXM2
IntAct:Q6NXM2 STRING:Q6NXM2 PhosphoSite:Q6NXM2 PaxDb:Q6NXM2
PRIDE:Q6NXM2 Ensembl:ENSMUST00000022551 Ensembl:ENSMUST00000043227
GeneID:71330 KEGG:mmu:71330 UCSC:uc007ueb.2 InParanoid:Q6NXM2
NextBio:333557 Bgee:Q6NXM2 Genevestigator:Q6NXM2
GermOnline:ENSMUSG00000035469 Uniprot:Q6NXM2
Length = 531
Score = 272 (100.8 bits), Expect = 3.7e-21, P = 3.7e-21
Identities = 57/176 (32%), Positives = 99/176 (56%)
Query: 291 VKEIACG-GRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP-SYASSLMDIQVEQIAA 348
+K ++ G G H + T+ G + +G Y Q G+G+TN + P ++L+ QV ++A
Sbjct: 76 IKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVAC 135
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
G H++ ++ +G ++ +G N GQ+G+G + P+ + T L +KR ++CG S
Sbjct: 136 GSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKV-TNCLHTKRVVNIACGQTSSM 194
Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
+ + G+V WG+N GQLGLG++ ++ P V +HG I CG+ HTL L +
Sbjct: 195 AVLDSGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTD 250
Score = 212 (79.7 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 55/170 (32%), Positives = 81/170 (47%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ-VEQIAAG 349
V E+ACG HS + G L +G+ GQ G GST +Q P ++ + + V IA G
Sbjct: 130 VIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACG 189
Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
++ + G VY +G N GQLG G + + P + L + CG H+
Sbjct: 190 QTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLTP--VRVAALHGMCVNQIVCGYAHTLA 247
Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIA-CGWWHT 458
LT++G + +WG N YGQLG G + P+ + + IA C HT
Sbjct: 248 LTDEGLLYAWGANTYGQLGTGSKNNLLSPTQIMVEKERVIEIAACHSTHT 297
Score = 203 (76.5 bits), Expect = 1.3e-19, Sum P(2) = 1.3e-19
Identities = 52/135 (38%), Positives = 74/135 (54%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYG--QCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
V IACG S V D+G + +GWG G Q G G+ +QL P ++L + V QI
Sbjct: 183 VVNIACGQTSSMAVLDSGEV--YGWGYNGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVC 240
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL-ESKRA-KVVSCGARH 406
G HT+ ++ EG +Y +G N +GQLGTG N+ L T I+ E +R ++ +C + H
Sbjct: 241 GYAHTLALTDEGLLYAWGANTYGQLGTG--SKNNL--LSPTQIMVEKERVIEIAACHSTH 296
Query: 407 -SAVLTEDGQVLSWG 420
SA T+ G V WG
Sbjct: 297 TSAAKTQGGHVYMWG 311
Score = 201 (75.8 bits), Expect = 4.7e-13, P = 4.7e-13
Identities = 50/168 (29%), Positives = 83/168 (49%)
Query: 304 VTDAGALLTFGWGLYGQC-GHGSTNDQLRPSYASSLMDIQVEQIAAGLW-HTVCISVEGR 361
VTD + FG Y C G G L P +L +++ ++ G H + + +G
Sbjct: 37 VTDNDEVFVFGLN-YSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLTTEDGV 95
Query: 362 VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
VY +G N + QLG G P + T +L K+ V+CG+ HS L DG++ +WG+
Sbjct: 96 VYAWGHNGYSQLGNGTTNQGIAPVQVCTNLL-IKQVIEVACGSHHSMALAADGELFAWGY 154
Query: 422 NKYGQLGLGDSIDRNIPSLVP--IHGFLPRNIACGWWHTLLLAETTQI 467
N GQ+G G + ++ P V +H NIACG ++ + ++ ++
Sbjct: 155 NNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEV 202
Score = 155 (59.6 bits), Expect = 6.0e-08, P = 6.0e-08
Identities = 48/136 (35%), Positives = 68/136 (50%)
Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
L P A S+ V +A + ++ V+VFG N LGTG +Q+ VPK LE
Sbjct: 13 LSPQEAGSIRKACVFGTSAN--EAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEA 70
Query: 390 PILESKRAKVVSCGAR-HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLP 448
L K+ K +S G+ H + TEDG V +WG N Y QLG G + P V + +
Sbjct: 71 --LCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIK 128
Query: 449 R--NIACGWWHTLLLA 462
+ +ACG H++ LA
Sbjct: 129 QVIEVACGSHHSMALA 144
Score = 103 (41.3 bits), Expect = 1.3e-19, Sum P(2) = 1.3e-19
Identities = 29/107 (27%), Positives = 46/107 (42%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
GT +S ++ LCG K + G L T+E G + WG G S L +G
Sbjct: 55 GTGDNQSTLVPKKLEALCG-KKIKSLSYGSGPHVLLTTEDGVVYAWGH---NGYSQLGNG 110
Query: 90 KHGETPEPFPLPTEA---SVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
+ P + T V++ A G H +++ GE++ WG+ C
Sbjct: 111 TTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNC 157
>UNIPROTKB|F1N1N9 [details] [associations]
symbol:HERC5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050688 "regulation of defense response to virus"
evidence=IEA] [GO:0042296 "ISG15 ligase activity" evidence=IEA]
[GO:0032020 "ISG15-protein conjugation" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0050688 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:KDWITNT GO:GO:0042296
GO:GO:0032020 EMBL:DAAA02017014 IPI:IPI00907336
Ensembl:ENSBTAT00000052811 Uniprot:F1N1N9
Length = 959
Score = 252 (93.8 bits), Expect = 5.8e-18, Sum P(2) = 5.8e-18
Identities = 61/175 (34%), Positives = 90/175 (51%)
Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST-NDQLRPSYASSLMDIQVEQIAAGLW 351
+I CG HS ++ G L +G L GQ G G P +L + + QI+AG
Sbjct: 152 QITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISAGEA 211
Query: 352 HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLT 411
H++ +S+ G VY +G N GQLG G + P +E L+ ++ + ++CG H+A+LT
Sbjct: 212 HSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEA--LDDQKVEFLACGGCHTALLT 269
Query: 412 EDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETT 465
+ G V ++G KYGQLG + + P LV + G IACG HTL T
Sbjct: 270 KSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQIACGRQHTLAYVSDT 324
Score = 223 (83.6 bits), Expect = 7.6e-21, Sum P(2) = 7.6e-21
Identities = 54/153 (35%), Positives = 86/153 (56%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
V+ +ACGG H+A++T +G + TFG G YGQ GH ST ++LRP + L+ +V QIA G
Sbjct: 255 VEFLACGGCHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQIACGR 314
Query: 351 WHTVC-ISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
HT+ +S G+V+ FG + GQLG G + + +P+ ++ +L S+ K S + +
Sbjct: 315 QHTLAYVSDTGKVFSFGSGKEGQLGNGGTRNQLIPRPMK--LLSSEELKSESSTSVKELI 372
Query: 410 LTEDGQ--VLSWGWNKYGQLGLGDSIDRNIPSL 440
+ G +L W + + L R IP+L
Sbjct: 373 MVAGGNQSILIWMEKENSYVNLR----RKIPTL 401
Score = 208 (78.3 bits), Expect = 6.8e-13, Sum P(2) = 6.8e-13
Identities = 51/147 (34%), Positives = 83/147 (56%)
Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWH 352
+I+ G HS ++ +G + ++G GQ G G T ++ PS +L D +VE +A G H
Sbjct: 205 QISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGGCH 264
Query: 353 TVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHS-AVLT 411
T ++ G V+ FG ++GQLG Q E P+L+ L R ++CG +H+ A ++
Sbjct: 265 TALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTG--LVGNRVTQIACGRQHTLAYVS 322
Query: 412 EDGQVLSWGWNKYGQLGLGDSIDRNIP 438
+ G+V S+G K GQLG G + ++ IP
Sbjct: 323 DTGKVFSFGSGKEGQLGNGGTRNQLIP 349
Score = 180 (68.4 bits), Expect = 9.1e-10, Sum P(2) = 9.1e-10
Identities = 43/129 (33%), Positives = 68/129 (52%)
Query: 338 LMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG-VDQAENVPKLLETPILESKR 396
L + + QI G +H++ +S G ++ +G N GQLG G + + + P+++E L
Sbjct: 145 LQEKNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVEN--LSGVP 202
Query: 397 AKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGW 455
+S G HS L+ G V SWG N GQLGLG + ++ PS + + +ACG
Sbjct: 203 LVQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGG 262
Query: 456 WHTLLLAET 464
HT LL ++
Sbjct: 263 CHTALLTKS 271
Score = 101 (40.6 bits), Expect = 7.6e-21, Sum P(2) = 7.6e-21
Identities = 28/79 (35%), Positives = 43/79 (54%)
Query: 60 CG--FALATSESGKLITWGSADDEGQSYLTSGK---HGETPEPFPLPTEASVVKAAAGWA 114
CG +LA S+ G+L WG D GQ L G+ TPE + +V+ +AG A
Sbjct: 155 CGDYHSLALSKGGELFAWGQNLD-GQ--LGVGRIFASTSTPEIVENLSGVPLVQISAGEA 211
Query: 115 HCVSVTEAGEVYTWGWREC 133
H ++++ +G VY+WG +C
Sbjct: 212 HSMALSMSGNVYSWGRNDC 230
Score = 77 (32.2 bits), Expect = 2.4e-18, Sum P(2) = 2.4e-18
Identities = 28/127 (22%), Positives = 54/127 (42%)
Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
E ++++ G H +++++ GE++ WG + V R F S + + S +P
Sbjct: 147 EKNIIQITCGDYHSLALSKGGELFAWG-QNLDGQLGVGRIFASTST--PEIVENLSGVPL 203
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSP-CLVTLNPGVKITKVAAGG 221
Q + + + S R + G + SP C+ L+ K+ +A GG
Sbjct: 204 VQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQ-KVEFLACGG 262
Query: 222 RHTLILS 228
HT +L+
Sbjct: 263 CHTALLT 269
Score = 41 (19.5 bits), Expect = 5.8e-18, Sum P(2) = 5.8e-18
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 187 EESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
E + PA D P + L +KI + G H L+LS
Sbjct: 85 EVHQLPAGSDG--ARKPKCIKLGKKMKIHSMDQGEEHMLVLS 124
>TAIR|locus:505006603 [details] [associations]
symbol:AT5G12350 "AT5G12350" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=ISS] [GO:0008536 "Ran GTPase binding" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009630 "gravitropism" evidence=RCA]
[GO:0009887 "organ morphogenesis" evidence=RCA] [GO:0009888 "tissue
development" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0010638 "positive regulation of
organelle organization" evidence=RCA] [GO:0033044 "regulation of
chromosome organization" evidence=RCA] [GO:0042546 "cell wall
biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045492 "xylan biosynthetic
process" evidence=RCA] InterPro:IPR000306 InterPro:IPR001849
InterPro:IPR024774 Pfam:PF01363 Pfam:PF12814 SMART:SM00064
SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005886
GO:GO:0005938 EMBL:CP002688 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046872 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0032065 InterPro:IPR013591 Pfam:PF08381
PROSITE:PS51514 IPI:IPI00540281 RefSeq:NP_568268.3 UniGene:At.22310
UniGene:At.51056 ProteinModelPortal:F4K0X5 SMR:F4K0X5
EnsemblPlants:AT5G12350.1 GeneID:831110 KEGG:ath:AT5G12350
OMA:NTNGHPR Uniprot:F4K0X5
Length = 1075
Score = 271 (100.5 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 61/176 (34%), Positives = 94/176 (53%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWG--LYGQCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
V+ IACGG+H+ +VT G +F WG G+ GHG ++ +P +L +E +A
Sbjct: 310 VQNIACGGQHAVLVTKQGE--SFSWGEESEGRLGHGVDSNIQQPKLIDALNTTNIELVAC 367
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
G +H+ +++ G +Y +G FG LG G + + VPK + +LE ++CG H+A
Sbjct: 368 GEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNF-LLEGIHVSSIACGPYHTA 426
Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
V+T GQ+ ++G +G LG GD IP V + G ACG WHT + E
Sbjct: 427 VVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWHTAAVVE 482
Score = 241 (89.9 bits), Expect = 8.5e-21, Sum P(2) = 8.5e-21
Identities = 64/193 (33%), Positives = 92/193 (47%)
Query: 290 YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAG 349
+V IACG H+AVVT AG L TFG G +G GHG P SL ++ + A G
Sbjct: 414 HVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACG 473
Query: 350 LWHTVCISVE-------------GRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKR 396
+WHT + VE G+++ +G G+LG G + + VP + ++E
Sbjct: 474 VWHTAAV-VEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAA-LVEPNF 531
Query: 397 AKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP--IHGFLPRNIACG 454
+V +CG + LT G V + G YGQLG D P+ V +H IACG
Sbjct: 532 CQV-ACGHSLTVALTTSGHVYTMGSPVYGQLG-NSHADGKTPNRVEGKLHKSFVEEIACG 589
Query: 455 WWHTLLLAETTQI 467
+H +L T++
Sbjct: 590 AYHVAVLTSRTEV 602
Score = 226 (84.6 bits), Expect = 4.6e-19, Sum P(2) = 4.6e-19
Identities = 58/165 (35%), Positives = 89/165 (53%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
V E+ G S+ + +G L T+G G G+ GHG+ +L P+ ++L++ Q+A G
Sbjct: 480 VVEVMVGSSSSSNCS-SGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNFCQVACGH 538
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
TV ++ G VY G +GQLG + P +E + +S + ++CGA H AVL
Sbjct: 539 SLTVALTTSGHVYTMGSPVYGQLGNSHADGKT-PNRVEGKLHKSF-VEEIACGAYHVAVL 596
Query: 411 TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACG 454
T +V +WG G+LG GD DRN P+LV + ++IACG
Sbjct: 597 TSRTEVYTWGKGSNGRLGHGDVDDRNSPTLVESLKDKQVKSIACG 641
Score = 202 (76.2 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 45/142 (31%), Positives = 73/142 (51%)
Query: 328 DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL 387
D L P S + + V+ IA G H V ++ +G + +G G+LG GVD PKL+
Sbjct: 295 DSLLPKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLI 354
Query: 388 ETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP--IHG 445
+ L + ++V+CG HS +T G + +WG +G LG G+ + +P V + G
Sbjct: 355 DA--LNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEG 412
Query: 446 FLPRNIACGWWHTLLLAETTQI 467
+IACG +HT ++ Q+
Sbjct: 413 IHVSSIACGPYHTAVVTSAGQL 434
Score = 154 (59.3 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 35/118 (29%), Positives = 59/118 (50%)
Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWH 352
++ACG + +T +G + T G +YGQ G+ + + L VE+IA G +H
Sbjct: 533 QVACGHSLTVALTTSGHVYTMGSPVYGQLGNSHADGKTPNRVEGKLHKSFVEEIACGAYH 592
Query: 353 TVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
++ VY +G G+LG G N P L+E+ L+ K+ K ++CG +A +
Sbjct: 593 VAVLTSRTEVYTWGKGSNGRLGHGDVDDRNSPTLVES--LKDKQVKSIACGTNFTAAV 648
Score = 151 (58.2 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 34/75 (45%), Positives = 45/75 (60%)
Query: 284 GKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQV 343
GK +S+V+EIACG H AV+T + T+G G G+ GHG +D+ P+ SL D QV
Sbjct: 576 GKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDVDDRNSPTLVESLKDKQV 635
Query: 344 EQIAAGLWHT--VCI 356
+ IA G T VCI
Sbjct: 636 KSIACGTNFTAAVCI 650
Score = 82 (33.9 bits), Expect = 8.5e-21, Sum P(2) = 8.5e-21
Identities = 20/74 (27%), Positives = 36/74 (48%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAH 115
CGG A+ ++ G+ +WG + EG+ + + P+ ++ A G H
Sbjct: 315 CGGQ--HAVLVTKQGESFSWGE-ESEGRLGHGVDSNIQQPKLIDALNTTNIELVACGEFH 371
Query: 116 CVSVTEAGEVYTWG 129
+VT +G++YTWG
Sbjct: 372 SCAVTLSGDLYTWG 385
Score = 77 (32.2 bits), Expect = 3.6e-10, Sum P(2) = 3.6e-10
Identities = 26/67 (38%), Positives = 35/67 (52%)
Query: 69 SGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT------EASVVKAAAGWAHCVSVTEA 122
SGKL TWG D +G+ G HG EP +PT E + + A G + V++T +
Sbjct: 495 SGKLFTWGDGD-KGRL----G-HGNK-EPKLVPTCVAALVEPNFCQVACGHSLTVALTTS 547
Query: 123 GEVYTWG 129
G VYT G
Sbjct: 548 GHVYTMG 554
Score = 68 (29.0 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
Identities = 24/73 (32%), Positives = 33/73 (45%)
Query: 60 CG-F-ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA-AAGWAHC 116
CG F + A + SG L TWG D + H P+ E V + A G H
Sbjct: 367 CGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHW-VPKRVNFLLEGIHVSSIACGPYHT 425
Query: 117 VSVTEAGEVYTWG 129
VT AG+++T+G
Sbjct: 426 AVVTSAGQLFTFG 438
Score = 57 (25.1 bits), Expect = 3.4e-18, Sum P(2) = 3.4e-18
Identities = 11/24 (45%), Positives = 14/24 (58%)
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWG 129
V A G H V VT+ GE ++WG
Sbjct: 310 VQNIACGGQHAVLVTKQGESFSWG 333
>UNIPROTKB|F1PB99 [details] [associations]
symbol:HERC5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:KDWITNT EMBL:AAEX03016753
EMBL:AAEX03016752 Ensembl:ENSCAFT00000015560 Uniprot:F1PB99
Length = 1025
Score = 276 (102.2 bits), Expect = 8.8e-21, Sum P(2) = 8.8e-21
Identities = 62/172 (36%), Positives = 95/172 (55%)
Query: 293 EIACGGRHSAVVT--DAGALLTFGWGLYGQCGHGSTNDQL-RPSYASSLMDIQVEQIAAG 349
+I CG HS ++ G L +G L+GQ G G + P L + + QI+AG
Sbjct: 139 QITCGDYHSLALSKGQGGELFAWGQNLHGQLGVGRLFTSIPTPQLVEHLSGVPLVQISAG 198
Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
H++ +S+ G +Y +G N GQLG G E+ P L+E L++++ + ++CG H+A+
Sbjct: 199 KAHSMALSMSGNIYSWGRNDLGQLGLGHTNGEDFPSLIEA--LDNQKVEFLACGGSHTAL 256
Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGW-WHTL 459
LT+DG V ++G KYGQLG + + P LV + G +ACG WHTL
Sbjct: 257 LTKDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQVACGSRWHTL 308
Score = 218 (81.8 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
Identities = 54/154 (35%), Positives = 82/154 (53%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
V+ +ACGG H+A++T G + TFG G YGQ GH ST ++LRP + L +V Q+A G
Sbjct: 244 VEFLACGGSHTALLTKDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQVACGS 303
Query: 351 -WHTVC-ISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
WHT+ +S G+V+ FG + GQLG G + +P ++ P ++ K S +
Sbjct: 304 RWHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKLP--SNEELKFESRTSEKEL 361
Query: 409 VLTEDGQ--VLSWGWNKYGQLGLGDSIDRNIPSL 440
++ G +L W K + L R IP+L
Sbjct: 362 IMIAGGNQSILLWMGKKNPYVNLR----RRIPTL 391
Score = 212 (79.7 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 57/160 (35%), Positives = 88/160 (55%)
Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWH 352
+I+ G HS ++ +G + ++G GQ G G TN + PS +L + +VE +A G H
Sbjct: 194 QISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTNGEDFPSLIEALDNQKVEFLACGGSH 253
Query: 353 TVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGAR-HSAVLT 411
T ++ +G V+ FG ++GQLG Q E P+L+ L R V+CG+R H+
Sbjct: 254 TALLTKDGLVFTFGAGKYGQLGHNSTQNELRPRLVTE--LAGNRVTQVACGSRWHTLAYV 311
Query: 412 ED-GQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN 450
D G+V S+G K GQLG G + ++ IP +P+ LP N
Sbjct: 312 SDLGKVFSFGSGKEGQLGNGGTHNQLIP--LPMK--LPSN 347
Score = 165 (63.1 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 44/130 (33%), Positives = 66/130 (50%)
Query: 338 LMDIQVEQIAAGLWHTVCISVE--GRVYVFGGNQFGQLGTG-VDQAENVPKLLETPILES 394
L + + QI G +H++ +S G ++ +G N GQLG G + + P+L+E L
Sbjct: 132 LQEKSIIQITCGDYHSLALSKGQGGELFAWGQNLHGQLGVGRLFTSIPTPQLVEH--LSG 189
Query: 395 KRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIAC 453
+S G HS L+ G + SWG N GQLGLG + + PSL+ + +AC
Sbjct: 190 VPLVQISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTNGEDFPSLIEALDNQKVEFLAC 249
Query: 454 GWWHTLLLAE 463
G HT LL +
Sbjct: 250 GGSHTALLTK 259
Score = 85 (35.0 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
Identities = 25/78 (32%), Positives = 40/78 (51%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE----ASVVKAAA 111
CG AL+ + G+L WG + GQ L G+ T P P E +V+ +A
Sbjct: 142 CGDYHSLALSKGQGGELFAWGQ-NLHGQ--LGVGRLF-TSIPTPQLVEHLSGVPLVQISA 197
Query: 112 GWAHCVSVTEAGEVYTWG 129
G AH ++++ +G +Y+WG
Sbjct: 198 GKAHSMALSMSGNIYSWG 215
Score = 41 (19.5 bits), Expect = 8.8e-21, Sum P(2) = 8.8e-21
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 206 VTLNPGVKITKVAAGGRHTLILS 228
+ L +KI V G H LILS
Sbjct: 88 IKLGKKMKIHSVDQGAEHMLILS 110
>UNIPROTKB|E1BKF7 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104208 CTD:55213 KO:K11494
OMA:NCSNCLG EMBL:DAAA02032915 EMBL:DAAA02032914 IPI:IPI00826911
RefSeq:NP_001178141.1 UniGene:Bt.22187 Ensembl:ENSBTAT00000035796
GeneID:785222 KEGG:bta:785222 NextBio:20927167 Uniprot:E1BKF7
Length = 531
Score = 267 (99.0 bits), Expect = 1.0e-20, Sum P(2) = 1.0e-20
Identities = 58/176 (32%), Positives = 98/176 (55%)
Query: 291 VKEIACG-GRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP-SYASSLMDIQVEQIAA 348
+K ++ G G H + T+ G + +G Y Q G+G+TN L P ++L+ QV ++A
Sbjct: 76 IKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVAC 135
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
G H++ ++ +G V+ +G N GQ+G+G + P+ + T L KR ++CG S
Sbjct: 136 GSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKV-TNCLHIKRVVGIACGQTSSM 194
Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
+ ++G+V WG+N GQLGLG++ ++ P V +H I CG+ HTL L +
Sbjct: 195 AVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTD 250
Score = 216 (81.1 bits), Expect = 8.9e-15, Sum P(2) = 8.9e-15
Identities = 54/155 (34%), Positives = 79/155 (50%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ-VEQIAAG 349
V E+ACG HS + G + +G+ GQ G GST +Q P ++ + I+ V IA G
Sbjct: 130 VVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACG 189
Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
++ + G VY +G N GQLG G + + P + L S + CG H+
Sbjct: 190 QTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTP--VRVAALHSVCVNQIVCGYAHTLA 247
Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIH 444
LT++G + +WG N YGQLG G+ N+ L P H
Sbjct: 248 LTDEGLLYAWGANTYGQLGTGNK--NNL--LSPAH 278
Score = 201 (75.8 bits), Expect = 4.7e-13, P = 4.7e-13
Identities = 52/168 (30%), Positives = 83/168 (49%)
Query: 304 VTDAGALLTFGWGLYGQC-GHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVE-GR 361
VTD+ + FG Y C G G + L P +L +++ ++ G V +S E G
Sbjct: 37 VTDSDEVFVFGLN-YSSCLGTGDNHSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGV 95
Query: 362 VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
VY +G N + QLG G P + T +L K+ V+CG+ HS L DG+V +WG+
Sbjct: 96 VYAWGHNGYSQLGNGTTNQGLAPIQVCTNLL-IKQVVEVACGSHHSMALAADGEVFAWGY 154
Query: 422 NKYGQLGLGDSIDRNIPSLVP--IHGFLPRNIACGWWHTLLLAETTQI 467
N GQ+G G + ++ P V +H IACG ++ + + ++
Sbjct: 155 NNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEV 202
Score = 197 (74.4 bits), Expect = 8.0e-19, Sum P(2) = 8.0e-19
Identities = 46/130 (35%), Positives = 68/130 (52%)
Query: 294 IACGGRHSAVVTDAGALLTFGWGLYG--QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW 351
IACG S V D G + +GWG G Q G G+ +QL P ++L + V QI G
Sbjct: 186 IACGQTSSMAVLDNGEV--YGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYA 243
Query: 352 HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH-SAVL 410
HT+ ++ EG +Y +G N +GQLGTG N+ + + + ++ +C + H SA
Sbjct: 244 HTLALTDEGLLYAWGANTYGQLGTG--NKNNLLSPAHIMVEKERVIEIAACHSAHTSAAK 301
Query: 411 TEDGQVLSWG 420
T+ G V WG
Sbjct: 302 TQGGHVYMWG 311
Score = 114 (45.2 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 26/77 (33%), Positives = 39/77 (50%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
V +I CG H+ +TD G L +G YGQ G G+ N+ L P++ + +E A
Sbjct: 235 VNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVEKERVIEIAACHS 294
Query: 351 WHTVCISVEG-RVYVFG 366
HT +G VY++G
Sbjct: 295 AHTSAAKTQGGHVYMWG 311
Score = 102 (41.0 bits), Expect = 8.0e-19, Sum P(2) = 8.0e-19
Identities = 30/107 (28%), Positives = 45/107 (42%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
GT S ++ LCG K + G L ++E G + WG G S L +G
Sbjct: 55 GTGDNHSTLVPKKLEALCG-KKIKSLSYGSGPHVLLSTEDGVVYAWGH---NGYSQLGNG 110
Query: 90 KHGETPEPFPLPTEA---SVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
+ P + T VV+ A G H +++ GEV+ WG+ C
Sbjct: 111 TTNQGLAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNC 157
Score = 91 (37.1 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 34/117 (29%), Positives = 52/117 (44%)
Query: 21 VVYMWGYLPGTSPEKSPILSP--IPARLCGGDSWKDVCGGGCG--FALATSESGKLITWG 76
VVY WG+ G S + + P ++C K V CG ++A + G++ WG
Sbjct: 95 VVYAWGH-NGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWG 153
Query: 77 SADDEGQSYLTSGKHGETPEPFPLPT---EASVVKAAAGWAHCVSVTEAGEVYTWGW 130
++ GQ + SG P P + VV A G ++V + GEVY WG+
Sbjct: 154 Y-NNCGQ--VGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGY 207
Score = 42 (19.8 bits), Expect = 8.9e-15, Sum P(2) = 8.9e-15
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILS 228
L+P V N +K + +VA G H++ L+
Sbjct: 116 LAPIQVCTNLLIKQVVEVACGSHHSMALA 144
Score = 40 (19.1 bits), Expect = 1.0e-20, Sum P(2) = 1.0e-20
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSD 229
+GD TL P + G KI ++ G G H L+ ++
Sbjct: 56 TGDNHSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTE 92
>UNIPROTKB|Q8NDN9 [details] [associations]
symbol:RCBTB1 "RCC1 and BTB domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR000210 InterPro:IPR013069
Pfam:PF00651 PROSITE:PS50097 SMART:SM00225 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0007049 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 EMBL:AL139321 EMBL:AF334406
EMBL:AJ319660 EMBL:AK096654 EMBL:AL833821 EMBL:BC038104
IPI:IPI00329626 IPI:IPI00973193 RefSeq:NP_060661.3
UniGene:Hs.508021 ProteinModelPortal:Q8NDN9 SMR:Q8NDN9
IntAct:Q8NDN9 MINT:MINT-4718485 STRING:Q8NDN9 PhosphoSite:Q8NDN9
DMDM:74751227 PRIDE:Q8NDN9 DNASU:55213 Ensembl:ENST00000258646
Ensembl:ENST00000378302 Ensembl:ENST00000546015 GeneID:55213
KEGG:hsa:55213 UCSC:uc001vde.1 CTD:55213 GeneCards:GC13M050106
HGNC:HGNC:18243 HPA:HPA045925 MIM:607867 neXtProt:NX_Q8NDN9
PharmGKB:PA134955699 HOGENOM:HOG000065752 HOVERGEN:HBG053261
InParanoid:Q8NDN9 KO:K11494 OMA:NCSNCLG OrthoDB:EOG4MSCXX
PhylomeDB:Q8NDN9 GenomeRNAi:55213 NextBio:59164 ArrayExpress:Q8NDN9
Bgee:Q8NDN9 CleanEx:HS_RCBTB1 Genevestigator:Q8NDN9
GermOnline:ENSG00000136144 Uniprot:Q8NDN9
Length = 531
Score = 268 (99.4 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 59/183 (32%), Positives = 101/183 (55%)
Query: 284 GKAGRSYVKEIACG-GRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP-SYASSLMDI 341
G G+ +K ++ G G H + T+ G + +G Y Q G+G+TN + P ++L+
Sbjct: 70 GLCGKK-IKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIK 128
Query: 342 QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVS 401
QV ++A G H++ ++ +G V+ +G N GQ+G+G + P+ + T L KR ++
Sbjct: 129 QVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKV-TNCLHIKRVVGIA 187
Query: 402 CGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLL 460
CG S + ++G+V WG+N GQLGLG++ ++ P V +H I CG+ HTL
Sbjct: 188 CGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLA 247
Query: 461 LAE 463
L +
Sbjct: 248 LTD 250
Score = 216 (81.1 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 54/155 (34%), Positives = 79/155 (50%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ-VEQIAAG 349
V E+ACG HS + G + +G+ GQ G GST +Q P ++ + I+ V IA G
Sbjct: 130 VVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACG 189
Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
++ + G VY +G N GQLG G + + P + L S + CG H+
Sbjct: 190 QTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTP--VRVAALHSVCVNQIVCGYAHTLA 247
Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIH 444
LT++G + +WG N YGQLG G+ N+ L P H
Sbjct: 248 LTDEGLLYAWGANTYGQLGTGNK--NNL--LSPAH 278
Score = 198 (74.8 bits), Expect = 6.2e-19, Sum P(2) = 6.2e-19
Identities = 46/130 (35%), Positives = 68/130 (52%)
Query: 294 IACGGRHSAVVTDAGALLTFGWGLYG--QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW 351
IACG S V D G + +GWG G Q G G+ +QL P ++L + V QI G
Sbjct: 186 IACGQTSSMAVLDNGEV--YGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYA 243
Query: 352 HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH-SAVL 410
HT+ ++ EG +Y +G N +GQLGTG N+ + + + ++ +C + H SA
Sbjct: 244 HTLALTDEGLLYAWGANTYGQLGTG--NKNNLLSPAHIMVEKERVVEIAACHSAHTSAAK 301
Query: 411 TEDGQVLSWG 420
T+ G V WG
Sbjct: 302 TQGGHVYMWG 311
Score = 197 (74.4 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 52/168 (30%), Positives = 80/168 (47%)
Query: 304 VTDAGALLTFGWGLYGQC-GHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVE-GR 361
VTD + FG Y C G G L P L +++ ++ G V +S E G
Sbjct: 37 VTDNDEVFVFGLN-YSNCLGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLSTEDGV 95
Query: 362 VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
VY +G N + QLG G P + T +L K+ V+CG+ HS L DG+V +WG+
Sbjct: 96 VYAWGHNGYSQLGNGTTNQGIAPVQVCTNLL-IKQVVEVACGSHHSMALAADGEVFAWGY 154
Query: 422 NKYGQLGLGDSIDRNIPSLVP--IHGFLPRNIACGWWHTLLLAETTQI 467
N GQ+G G + ++ P V +H IACG ++ + + ++
Sbjct: 155 NNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEV 202
Score = 115 (45.5 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 27/77 (35%), Positives = 39/77 (50%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
V +I CG H+ +TD G L +G YGQ G G+ N+ L P++ + VE A
Sbjct: 235 VNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHS 294
Query: 351 WHTVCISVEG-RVYVFG 366
HT +G VY++G
Sbjct: 295 AHTSAAKTQGGHVYMWG 311
Score = 102 (41.0 bits), Expect = 6.2e-19, Sum P(2) = 6.2e-19
Identities = 30/107 (28%), Positives = 46/107 (42%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
GT +S ++ LCG K + G L ++E G + WG G S L +G
Sbjct: 55 GTGDNQSTLVPKKLEGLCG-KKIKSLSYGSGPHVLLSTEDGVVYAWGH---NGYSQLGNG 110
Query: 90 KHGETPEPFPLPTEA---SVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
+ P + T VV+ A G H +++ GEV+ WG+ C
Sbjct: 111 TTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNC 157
Score = 92 (37.4 bits), Expect = 6.8e-18, Sum P(2) = 6.8e-18
Identities = 33/116 (28%), Positives = 50/116 (43%)
Query: 21 VVYMWGYLPGTSPEKSPILSPI-PARLCGGDSWKDVCGGGCG--FALATSESGKLITWGS 77
VVY WG+ + I P ++C K V CG ++A + G++ WG
Sbjct: 95 VVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGY 154
Query: 78 ADDEGQSYLTSGKHGETPEPFPLPT---EASVVKAAAGWAHCVSVTEAGEVYTWGW 130
++ GQ + SG P P + VV A G ++V + GEVY WG+
Sbjct: 155 -NNCGQ--VGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGY 207
Score = 40 (19.1 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 9/29 (31%), Positives = 17/29 (58%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILS 228
++P V N +K + +VA G H++ L+
Sbjct: 116 IAPVQVCTNLLIKQVVEVACGSHHSMALA 144
>UNIPROTKB|E1C514 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:SPAVDFR EMBL:AADN02016126
EMBL:AADN02016127 EMBL:AADN02016128 EMBL:AADN02016129
IPI:IPI00576498 Ensembl:ENSGALT00000016877 ArrayExpress:E1C514
Uniprot:E1C514
Length = 1050
Score = 267 (99.0 bits), Expect = 3.2e-19, Sum P(2) = 3.2e-19
Identities = 62/175 (35%), Positives = 90/175 (51%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
VKE+ACGG HS + + G + T G GQ GH S +P++ +L + +A G
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHESEGS--KPAWVGTLAGQHIVHVACGE 93
Query: 351 WHTVCISVEGRVYVFGGNQFGQLG-TGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
H+V +S +G+V+ +G GQLG T ++ A VP+L++ L + +SCG H
Sbjct: 94 SHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKK--LNQQTILQISCGNWHCLA 151
Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNI-PSLVP-IHGFLPRNIACGWWHTLLLA 462
L DGQ +WG N YGQLGLG P V + G +A G H+ L+
Sbjct: 152 LAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALS 206
Score = 240 (89.5 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 62/178 (34%), Positives = 89/178 (50%)
Query: 285 KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST-NDQLRPSYASSLMDIQV 343
K + + +I+CG H + G T+G YGQ G G Q P SL I +
Sbjct: 133 KLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPL 192
Query: 344 EQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCG 403
Q+AAG H+ +S+ G V+ +G N GQLG ++ P +L S++ +SCG
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESP--CHVKLLRSQKVVYISCG 250
Query: 404 ARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI-PSLV-PIHGFLPRNIACGWWHTL 459
H+AVLT+ G V ++G GQLG DS++ + P V + G IACG HTL
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLG-HDSMNDEVNPRRVLELMGSEVSQIACGRHHTL 307
Score = 240 (89.5 bits), Expect = 5.0e-16, Sum P(2) = 5.0e-16
Identities = 58/182 (31%), Positives = 94/182 (51%)
Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR-PSYASSLMDIQVE 344
AG+ ++ +ACG HS ++D G + ++G G GQ G + D + P L +
Sbjct: 82 AGQ-HIVHVACGESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTIL 140
Query: 345 QIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD-QAENVPKLLETPILESKRAKVVSCG 403
QI+ G WH + ++ +G+ + +G N +GQLG G + ++ P+ +++ L+ V+ G
Sbjct: 141 QISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKS--LDGIPLAQVAAG 198
Query: 404 ARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI-HGFLPRNIACGWWHTLLLA 462
HS L+ G V WG N GQLGL D DR P V + I+CG HT +L
Sbjct: 199 GAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLT 258
Query: 463 ET 464
++
Sbjct: 259 KS 260
Score = 194 (73.4 bits), Expect = 8.4e-12, P = 8.4e-12
Identities = 55/161 (34%), Positives = 80/161 (49%)
Query: 310 LLTFGWGLYGQCGHGSTNDQL--RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
+L +G+ +GQ G GS + P + D V+++A G H+V + +G VY G
Sbjct: 1 MLCWGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGL 60
Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
N GQLG + ++ P + T L + V+CG HS L++ GQV SWG GQL
Sbjct: 61 NTKGQLGHESEGSK--PAWVGT--LAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQL 116
Query: 428 GLGDSIDR-NIPSLVP-IHGFLPRNIACGWWHTLLLAETTQ 466
GL D +P L+ ++ I+CG WH L LA Q
Sbjct: 117 GLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQ 157
Score = 191 (72.3 bits), Expect = 7.0e-19, Sum P(2) = 7.0e-19
Identities = 39/84 (46%), Positives = 50/84 (59%)
Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
I+CG H+AV+T +G + TFG G GQ GH S ND++ P LM +V QIA G HT
Sbjct: 247 ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHT 306
Query: 354 VC-ISVEGRVYVFGGNQFGQLGTG 376
+ + G +Y FG GQLGTG
Sbjct: 307 LAFVPSSGMIYAFGCGTRGQLGTG 330
Score = 127 (49.8 bits), Expect = 0.00018, P = 0.00018
Identities = 34/104 (32%), Positives = 56/104 (53%)
Query: 365 FGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKY 424
+G + FGQ G G + +P+ + + K V+CG HS L EDG+V + G N
Sbjct: 4 WGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 425 GQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAETTQI 467
GQLG +S + + P+ V + G ++ACG H++ L++ Q+
Sbjct: 64 GQLG-HES-EGSKPAWVGTLAGQHIVHVACGESHSVALSDQGQV 105
Score = 118 (46.6 bits), Expect = 7.0e-19, Sum P(2) = 7.0e-19
Identities = 39/172 (22%), Positives = 74/172 (43%)
Query: 60 CG--FALATSESGKLITWGSADDEGQSYLTSGKHGET-PEPFPLPTEASVVKAAAGWAHC 116
CG ++A S+ G++ +WG+ D GQ LT+ + T P + ++++ + G HC
Sbjct: 91 CGESHSVALSDQGQVFSWGAGSD-GQLGLTTIEDAVTVPRLIKKLNQQTILQISCGNWHC 149
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++ G+ +TWG + + ++ S S Q+ + +P Q +
Sbjct: 150 LALAADGQFFTWG-QNSYGQLGLGKECPSQASPQRVKS--LDGIPLAQVAAGGAHSFALS 206
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ + S DE SPC V L K+ ++ G HT +L+
Sbjct: 207 LSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLT 258
Score = 93 (37.8 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 32/109 (29%), Positives = 46/109 (42%)
Query: 25 WGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQS 84
+G L G E SP + G V GG + A S SG + WG + GQ
Sbjct: 166 YGQL-GLGKECPSQASPQRVKSLDGIPLAQVAAGGA-HSFALSLSGAVFGWGK-NSSGQL 222
Query: 85 YLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
L+ + E+P L VV + G H +T++G V+T+G C
Sbjct: 223 GLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSC 271
Score = 81 (33.6 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 36/115 (31%), Positives = 56/115 (48%)
Query: 25 WGYL----PGTSPEKSPILSPIPARLCG--GD-SWKDV-CGGGCGFALATSESGKLITWG 76
WGY PG I+ P P ++ G D + K+V CGG L E G++ T G
Sbjct: 4 WGYSSFGQPGIGSNLQVII-PEP-QVYGFIHDRNVKEVACGGNHSVFLL--EDGEVYTCG 59
Query: 77 SADDEGQSYLTSGKHGETPEPFPLPTEAS--VVKAAAGWAHCVSVTEAGEVYTWG 129
+ +GQ G E +P + T A +V A G +H V++++ G+V++WG
Sbjct: 60 -LNTKGQL----GHESEGSKPAWVGTLAGQHIVHVACGESHSVALSDQGQVFSWG 109
Score = 81 (33.6 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 20/46 (43%), Positives = 25/46 (54%)
Query: 289 SYVKEIACGGRHS-AVVTDAGALLTFGWGLYGQCGHGSTNDQLRPS 333
S V +IACG H+ A V +G + FG G GQ G G T + PS
Sbjct: 294 SEVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNVKCPS 339
Score = 43 (20.2 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 13/35 (37%), Positives = 15/35 (42%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
G E P V G I VA G H++ LSD
Sbjct: 67 GHESEGSKPAWVGTLAGQHIVHVACGESHSVALSD 101
Score = 37 (18.1 bits), Expect = 3.2e-19, Sum P(2) = 3.2e-19
Identities = 6/14 (42%), Positives = 10/14 (71%)
Query: 214 ITKVAAGGRHTLIL 227
+ +VA GG H++ L
Sbjct: 36 VKEVACGGNHSVFL 49
>RGD|1308467 [details] [associations]
symbol:Rcbtb1 "regulator of chromosome condensation (RCC1) and
BTB (POZ) domain containing protein 1" species:10116 "Rattus
norvegicus" [GO:0005737 "cytoplasm" evidence=IEA;ISO]
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 RGD:1308467 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:CH474049
GeneTree:ENSGT00700000104208 CTD:55213 KO:K11494 OMA:NCSNCLG
OrthoDB:EOG4MSCXX IPI:IPI00364409 RefSeq:NP_001101850.1
UniGene:Rn.229110 Ensembl:ENSRNOT00000037800 GeneID:361050
KEGG:rno:361050 UCSC:RGD:1308467 NextBio:675026 Uniprot:D4AD40
Length = 531
Score = 267 (99.0 bits), Expect = 1.4e-20, P = 1.4e-20
Identities = 56/176 (31%), Positives = 99/176 (56%)
Query: 291 VKEIACG-GRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP-SYASSLMDIQVEQIAA 348
+K ++ G G H + T+ G + +G Y Q G+G+TN + P ++L+ QV ++A
Sbjct: 76 IKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLVKQVVEVAC 135
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
G H++ ++ +G ++ +G N GQ+G+G + P+ + T L +K+ ++CG S
Sbjct: 136 GSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKV-TNCLHTKKVVNIACGQTSSM 194
Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
+ + G+V WG+N GQLGLG++ ++ P V +HG I CG+ HTL L +
Sbjct: 195 AVLDSGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHGVCVNQIVCGYAHTLALTD 250
Score = 212 (79.7 bits), Expect = 3.3e-14, Sum P(2) = 3.3e-14
Identities = 55/170 (32%), Positives = 81/170 (47%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ-VEQIAAG 349
V E+ACG HS + G L +G+ GQ G GST +Q P ++ + + V IA G
Sbjct: 130 VVEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKKVVNIACG 189
Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
++ + G VY +G N GQLG G + + P + L + CG H+
Sbjct: 190 QTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLTP--VRVAALHGVCVNQIVCGYAHTLA 247
Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIA-CGWWHT 458
LT++G + +WG N YGQLG G + P+ + + IA C HT
Sbjct: 248 LTDEGLLYAWGANTYGQLGTGSKNNLLSPTQIMVEKERVIEIAACHSTHT 297
Score = 206 (77.6 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 52/168 (30%), Positives = 84/168 (50%)
Query: 304 VTDAGALLTFGWGLYGQC-GHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVE-GR 361
VTD+ + FG Y C G G L P +L +++ ++ G V +S E G
Sbjct: 37 VTDSDEVFVFGLN-YSNCLGTGDNQSTLVPKKLEALCGKRIKSLSYGSGPHVLLSTEDGV 95
Query: 362 VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
VY +G N + QLG G P + T +L K+ V+CG+ HS L DG++ +WG+
Sbjct: 96 VYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLV-KQVVEVACGSHHSMALAADGELFAWGY 154
Query: 422 NKYGQLGLGDSIDRNIPSLVP--IHGFLPRNIACGWWHTLLLAETTQI 467
N GQ+G G + ++ P V +H NIACG ++ + ++ ++
Sbjct: 155 NNCGQVGSGSTANQPTPRKVTNCLHTKKVVNIACGQTSSMAVLDSGEV 202
Score = 205 (77.2 bits), Expect = 1.6e-19, Sum P(2) = 1.6e-19
Identities = 52/135 (38%), Positives = 74/135 (54%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYG--QCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
V IACG S V D+G + +GWG G Q G G+ +QL P ++L + V QI
Sbjct: 183 VVNIACGQTSSMAVLDSGEV--YGWGYNGNGQLGLGNNGNQLTPVRVAALHGVCVNQIVC 240
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPIL-ESKRA-KVVSCGARH 406
G HT+ ++ EG +Y +G N +GQLGTG N+ L T I+ E +R ++ +C + H
Sbjct: 241 GYAHTLALTDEGLLYAWGANTYGQLGTG--SKNNL--LSPTQIMVEKERVIEIAACHSTH 296
Query: 407 -SAVLTEDGQVLSWG 420
SA T+ G V WG
Sbjct: 297 TSAAKTQGGHVYMWG 311
Score = 157 (60.3 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 49/136 (36%), Positives = 68/136 (50%)
Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
L P S+ V I+A + ++ V+VFG N LGTG +Q+ VPK LE
Sbjct: 13 LSPQETGSIRKACVFGISAS--EAIYVTDSDEVFVFGLNYSNCLGTGDNQSTLVPKKLEA 70
Query: 390 PILESKRAKVVSCGAR-HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLP 448
L KR K +S G+ H + TEDG V +WG N Y QLG G + P V + +
Sbjct: 71 --LCGKRIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLVK 128
Query: 449 R--NIACGWWHTLLLA 462
+ +ACG H++ LA
Sbjct: 129 QVVEVACGSHHSMALA 144
Score = 100 (40.3 bits), Expect = 1.6e-19, Sum P(2) = 1.6e-19
Identities = 29/107 (27%), Positives = 46/107 (42%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
GT +S ++ LCG K + G L ++E G + WG G S L +G
Sbjct: 55 GTGDNQSTLVPKKLEALCG-KRIKSLSYGSGPHVLLSTEDGVVYAWGH---NGYSQLGNG 110
Query: 90 KHGETPEPFPLPTEA---SVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
+ P + T VV+ A G H +++ GE++ WG+ C
Sbjct: 111 TTNQGIAPIQVCTNLLVKQVVEVACGSHHSMALAADGELFAWGYNNC 157
Score = 41 (19.5 bits), Expect = 3.3e-14, Sum P(2) = 3.3e-14
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILS 228
++P V N VK + +VA G H++ L+
Sbjct: 116 IAPIQVCTNLLVKQVVEVACGSHHSMALA 144
>TAIR|locus:2025277 [details] [associations]
symbol:PRAF1 "AT1G76950" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=ISS]
[GO:0008536 "Ran GTPase binding" evidence=ISS] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR000306 Pfam:PF01363
SMART:SM00064 INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0046872
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR013591 Pfam:PF08381
PROSITE:PS51514 HSSP:Q15075 EMBL:AF323270 IPI:IPI00521580
RefSeq:NP_565144.1 UniGene:At.19186 ProteinModelPortal:Q947D2
SMR:Q947D2 PRIDE:Q947D2 EnsemblPlants:AT1G76950.1 GeneID:844030
KEGG:ath:AT1G76950 TAIR:At1g76950 InParanoid:Q947D2 OMA:WIPKRIA
PhylomeDB:Q947D2 ProtClustDB:CLSN2686442 Genevestigator:Q947D2
Uniprot:Q947D2
Length = 1103
Score = 250 (93.1 bits), Expect = 2.5e-17, Sum P(2) = 2.5e-17
Identities = 61/177 (34%), Positives = 90/177 (50%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ-VEQIAAG 349
V +IACG RH+A VT G + T+G G+ GHG D P SL V+ +A G
Sbjct: 283 VHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHPRLVESLTATSSVDFVACG 342
Query: 350 LWHTVCISVEGRVYVFGG--NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHS 407
+HT +++ G +Y +G + G LG G D + +PK + LE VSCG H+
Sbjct: 343 EFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGS-LEGLHVASVSCGPWHT 401
Query: 408 AVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
A++T G++ ++G +G LG GD P V + G ++CG WHT + E
Sbjct: 402 ALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESLSGLRTIAVSCGVWHTAAVVE 458
Score = 237 (88.5 bits), Expect = 2.1e-20, Sum P(2) = 2.1e-20
Identities = 75/216 (34%), Positives = 101/216 (46%)
Query: 268 GKD--RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY--GQCGH 323
GKD P LV + SS V +ACG H+ VT AG L T+G G + G GH
Sbjct: 318 GKDVFHPRLVESLTATSS-------VDFVACGEFHTCAVTLAGELYTWGDGTHNVGLLGH 370
Query: 324 GSTNDQLRPS-YASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAEN 382
GS P A SL + V ++ G WHT I+ GR++ FG FG LG G +
Sbjct: 371 GSDISHWIPKRIAGSLEGLHVASVSCGPWHTALITSYGRLFTFGDGTFGVLGHGDKETVQ 430
Query: 383 VPKLLETPILESKRAKVVSCGARHSAVLTE------------DGQVLSWGWNKYGQLGLG 430
P+ +E+ L R VSCG H+A + E G++ +WG +LG G
Sbjct: 431 YPREVES--LSGLRTIAVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHG 488
Query: 431 DSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETT 465
D R P+ VP + + IACG H+L + TT
Sbjct: 489 DKDPRLKPTCVPALIDYNFHKIACG--HSLTVGLTT 522
Score = 227 (85.0 bits), Expect = 1.4e-19, Sum P(2) = 1.4e-19
Identities = 58/165 (35%), Positives = 90/165 (54%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
V EI +S+ V+ +G L T+G G + GHG + +L+P+ +L+D +IA G
Sbjct: 456 VVEIIVTQSNSSSVS-SGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNFHKIACGH 514
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
TV ++ G+V+ G +GQLG + +P L+E L S+ + +SCGA H A L
Sbjct: 515 SLTVGLTTSGQVFTMGSTVYGQLGN-LQTDGKLPCLVEDK-LASEFVEEISCGAYHVAAL 572
Query: 411 TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACG 454
T +V +WG G+LG GD DR +P++V + + IACG
Sbjct: 573 TSRNEVYTWGKGANGRLGHGDLEDRKVPTIVEALKDRHVKYIACG 617
Score = 204 (76.9 bits), Expect = 5.9e-17, Sum P(2) = 5.9e-17
Identities = 57/194 (29%), Positives = 87/194 (44%)
Query: 290 YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAG 349
+V ++CG H+A++T G L TFG G +G GHG P SL ++ ++ G
Sbjct: 390 HVASVSCGPWHTALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESLSGLRTIAVSCG 449
Query: 350 LWHTVCI-----------SVE-GRVYVFGGNQFGQLGTGVDQAENVPKLLET--PILESK 395
+WHT + SV G+++ +G +LG G + P+L T P L
Sbjct: 450 VWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHG----DKDPRLKPTCVPALIDY 505
Query: 396 RAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP--IHGFLPRNIAC 453
++CG + LT GQV + G YGQLG D +P LV + I+C
Sbjct: 506 NFHKIACGHSLTVGLTTSGQVFTMGSTVYGQLG-NLQTDGKLPCLVEDKLASEFVEEISC 564
Query: 454 GWWHTLLLAETTQI 467
G +H L ++
Sbjct: 565 GAYHVAALTSRNEV 578
Score = 179 (68.1 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 41/138 (29%), Positives = 71/138 (51%)
Query: 328 DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL 387
D L P S + + V QIA G+ H ++ +G ++ +G G+LG G+ + P+L+
Sbjct: 268 DVLVPKPLESNIVLDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHPRLV 327
Query: 388 ETPILESKRAKVVSCGARHSAVLTEDGQVLSWG--WNKYGQLGLGDSIDRNIPSLVP--I 443
E+ + + V+CG H+ +T G++ +WG + G LG G I IP + +
Sbjct: 328 ES-LTATSSVDFVACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSL 386
Query: 444 HGFLPRNIACGWWHTLLL 461
G +++CG WHT L+
Sbjct: 387 EGLHVASVSCGPWHTALI 404
Score = 158 (60.7 bits), Expect = 7.7e-12, Sum P(2) = 7.7e-12
Identities = 35/118 (29%), Positives = 62/118 (52%)
Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWH 352
+IACG + +T +G + T G +YGQ G+ T+ +L L VE+I+ G +H
Sbjct: 509 KIACGHSLTVGLTTSGQVFTMGSTVYGQLGNLQTDGKLPCLVEDKLASEFVEEISCGAYH 568
Query: 353 TVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
++ VY +G G+LG G + VP ++E L+ + K ++CG+ ++A +
Sbjct: 569 VAALTSRNEVYTWGKGANGRLGHGDLEDRKVPTIVEA--LKDRHVKYIACGSNYTAAI 624
Score = 126 (49.4 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 29/85 (34%), Positives = 43/85 (50%)
Query: 285 KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVE 344
K +V+EI+CG H A +T + T+G G G+ GHG D+ P+ +L D V+
Sbjct: 553 KLASEFVEEISCGAYHVAALTSRNEVYTWGKGANGRLGHGDLEDRKVPTIVEALKDRHVK 612
Query: 345 QIAAGLWHTVCISVEGRVYVFGGNQ 369
IA G +T I + +V G Q
Sbjct: 613 YIACGSNYTAAICLHK--WVSGAEQ 635
Score = 86 (35.3 bits), Expect = 1.4e-19, Sum P(2) = 1.4e-19
Identities = 28/79 (35%), Positives = 36/79 (45%)
Query: 54 DVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP-LPTEASVVKAA 110
DV CG A + G++ TWG + G+ GK P L +SV A
Sbjct: 282 DVHQIACGVRHAAFVTRQGEIFTWGE-ESGGRLGHGIGKDVFHPRLVESLTATSSVDFVA 340
Query: 111 AGWAHCVSVTEAGEVYTWG 129
G H +VT AGE+YTWG
Sbjct: 341 CGEFHTCAVTLAGELYTWG 359
Score = 83 (34.3 bits), Expect = 2.1e-20, Sum P(2) = 2.1e-20
Identities = 18/50 (36%), Positives = 24/50 (48%)
Query: 80 DEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
D+ SYLT+ P+P V + A G H VT GE++TWG
Sbjct: 257 DKNASYLTTRTDVLVPKPLESNIVLDVHQIACGVRHAAFVTRQGEIFTWG 306
Score = 74 (31.1 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 21/63 (33%), Positives = 32/63 (50%)
Query: 69 SGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT--EASVVKAAAGWAHCVSVTEAGEVY 126
SGKL TWG D ++ L G +P +P + + K A G + V +T +G+V+
Sbjct: 471 SGKLFTWGDGD---KNRLGHGDKDPRLKPTCVPALIDYNFHKIACGHSLTVGLTTSGQVF 527
Query: 127 TWG 129
T G
Sbjct: 528 TMG 530
Score = 53 (23.7 bits), Expect = 3.9e-16, Sum P(2) = 3.9e-16
Identities = 36/130 (27%), Positives = 51/130 (39%)
Query: 22 VYMWG---YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG---FALATSESGKLITW 75
+Y WG + G S I IP R+ G V CG AL TS G+L T+
Sbjct: 355 LYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVASVSCGPWHTALITSY-GRLFTF 413
Query: 76 GSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSVTE---------- 121
G D L G ET + +P E+ + + G H +V E
Sbjct: 414 G---DGTFGVLGHGDK-ETVQ-YPREVESLSGLRTIAVSCGVWHTAAVVEIIVTQSNSSS 468
Query: 122 --AGEVYTWG 129
+G+++TWG
Sbjct: 469 VSSGKLFTWG 478
Score = 45 (20.9 bits), Expect = 2.7e-15, Sum P(2) = 2.7e-15
Identities = 19/75 (25%), Positives = 28/75 (37%)
Query: 60 CG--FALATSESGKLITWGSADDEGQSYLTSGKHGE--TPEPFPLPTEA-SVVKAAAGWA 114
CG A + +G+L TWG L G P+ E V + G
Sbjct: 341 CGEFHTCAVTLAGELYTWGDGT-HNVGLLGHGSDISHWIPKRIAGSLEGLHVASVSCGPW 399
Query: 115 HCVSVTEAGEVYTWG 129
H +T G ++T+G
Sbjct: 400 HTALITSYGRLFTFG 414
Score = 39 (18.8 bits), Expect = 2.5e-17, Sum P(2) = 2.5e-17
Identities = 13/41 (31%), Positives = 19/41 (46%)
Query: 105 SVVKAAAGWAHCVSVTEA---GEVYTWGWRECVPSAKVTRD 142
SV A + +H + ++ G+VY WG C KV D
Sbjct: 217 SVSSAQSSSSHGSAADDSDALGDVYIWGEVICDNVVKVGID 257
>UNIPROTKB|I3LCV3 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104208 OMA:NCSNCLG
EMBL:FP325140 Ensembl:ENSSSCT00000023143 Uniprot:I3LCV3
Length = 560
Score = 266 (98.7 bits), Expect = 2.2e-20, P = 2.2e-20
Identities = 57/176 (32%), Positives = 98/176 (55%)
Query: 291 VKEIACG-GRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP-SYASSLMDIQVEQIAA 348
+K ++ G G H + T+ G + +G Y Q G+G+TN + P ++L+ QV ++A
Sbjct: 105 IKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVAC 164
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
G H++ ++ +G V+ +G N GQ+G+G + P+ + T L KR ++CG S
Sbjct: 165 GSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKV-TNCLHIKRVVSIACGQTSSM 223
Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
+ ++G+V WG+N GQLGLG++ ++ P V +H I CG+ HTL L +
Sbjct: 224 AVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTD 279
Score = 218 (81.8 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 54/155 (34%), Positives = 79/155 (50%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ-VEQIAAG 349
V E+ACG HS + G + +G+ GQ G GST +Q P ++ + I+ V IA G
Sbjct: 159 VVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACG 218
Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
++ + G VY +G N GQLG G + + P + L S + CG H+
Sbjct: 219 QTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTP--VRVAALHSVCVNQIVCGYAHTLA 276
Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIH 444
LT++G + +WG N YGQLG G+ N+ L P H
Sbjct: 277 LTDEGLLYAWGANTYGQLGTGNK--NNL--LSPAH 307
Score = 200 (75.5 bits), Expect = 2.8e-19, Sum P(2) = 2.8e-19
Identities = 47/133 (35%), Positives = 69/133 (51%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYG--QCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
V IACG S V D G + +GWG G Q G G+ +QL P ++L + V QI
Sbjct: 212 VVSIACGQTSSMAVLDNGEV--YGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVC 269
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH-S 407
G HT+ ++ EG +Y +G N +GQLGTG N+ + + + ++ +C + H S
Sbjct: 270 GYAHTLALTDEGLLYAWGANTYGQLGTG--NKNNLLSPAHIMVEKERVVEIAACHSAHTS 327
Query: 408 AVLTEDGQVLSWG 420
A T+ G V WG
Sbjct: 328 AAKTQGGHVYMWG 340
Score = 198 (74.8 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 52/168 (30%), Positives = 82/168 (48%)
Query: 304 VTDAGALLTFGWGLYGQC-GHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVE-GR 361
VTD + FG Y C G G L P +L +++ ++ G V +S E G
Sbjct: 66 VTDNDEVFVFGLN-YSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGV 124
Query: 362 VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
VY +G N + QLG G P + T +L K+ V+CG+ HS L DG+V +WG+
Sbjct: 125 VYAWGHNGYSQLGNGTTNQGIAPIQVCTNLL-IKQVVEVACGSHHSMALAADGEVFAWGY 183
Query: 422 NKYGQLGLGDSIDRNIPSLVP--IHGFLPRNIACGWWHTLLLAETTQI 467
N GQ+G G + ++ P V +H +IACG ++ + + ++
Sbjct: 184 NNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEV 231
Score = 104 (41.7 bits), Expect = 2.8e-19, Sum P(2) = 2.8e-19
Identities = 30/107 (28%), Positives = 46/107 (42%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
GT +S ++ LCG K + G L ++E G + WG G S L +G
Sbjct: 84 GTGDNQSTLVPKKLEALCG-KKIKSLSYGSGPHVLLSTEDGVVYAWGH---NGYSQLGNG 139
Query: 90 KHGETPEPFPLPTEA---SVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
+ P + T VV+ A G H +++ GEV+ WG+ C
Sbjct: 140 TTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNC 186
Score = 40 (19.1 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 9/29 (31%), Positives = 17/29 (58%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILS 228
++P V N +K + +VA G H++ L+
Sbjct: 145 IAPIQVCTNLLIKQVVEVACGSHHSMALA 173
>UNIPROTKB|F1PV11 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104208 CTD:55213 KO:K11494 OMA:NCSNCLG
EMBL:AAEX03013105 RefSeq:XP_542558.2 Ensembl:ENSCAFT00000006979
GeneID:485440 KEGG:cfa:485440 Uniprot:F1PV11
Length = 531
Score = 265 (98.3 bits), Expect = 2.4e-20, P = 2.4e-20
Identities = 57/176 (32%), Positives = 98/176 (55%)
Query: 291 VKEIACG-GRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP-SYASSLMDIQVEQIAA 348
+K ++ G G H + T+ G + +G Y Q G+G+TN + P ++L+ QV ++A
Sbjct: 76 IKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVAC 135
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
G H++ ++ +G V+ +G N GQ+G+G + P+ + T L KR ++CG S
Sbjct: 136 GSHHSMALAADGEVFAWGYNNCGQVGSGSTTNQPTPRKV-TNCLHIKRVVGIACGQTSSM 194
Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
+ ++G+V WG+N GQLGLG++ ++ P V +H I CG+ HTL L +
Sbjct: 195 AVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTD 250
Score = 218 (81.8 bits), Expect = 8.3e-15, Sum P(2) = 8.3e-15
Identities = 54/155 (34%), Positives = 79/155 (50%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ-VEQIAAG 349
V E+ACG HS + G + +G+ GQ G GST +Q P ++ + I+ V IA G
Sbjct: 130 VVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACG 189
Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
++ + G VY +G N GQLG G + + P + L S + CG H+
Sbjct: 190 QTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTP--VRVAALHSVCVNQIVCGYAHTLA 247
Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIH 444
LT++G + +WG N YGQLG G+ N+ L P H
Sbjct: 248 LTDEGLLYAWGANTYGQLGTGNK--NNL--LSPAH 278
Score = 198 (74.8 bits), Expect = 3.8e-19, Sum P(2) = 3.8e-19
Identities = 46/130 (35%), Positives = 68/130 (52%)
Query: 294 IACGGRHSAVVTDAGALLTFGWGLYG--QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW 351
IACG S V D G + +GWG G Q G G+ +QL P ++L + V QI G
Sbjct: 186 IACGQTSSMAVLDNGEV--YGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYA 243
Query: 352 HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH-SAVL 410
HT+ ++ EG +Y +G N +GQLGTG N+ + + + ++ +C + H SA
Sbjct: 244 HTLALTDEGLLYAWGANTYGQLGTG--NKNNLLSPAHIMVEKERVVEIAACHSAHTSAAK 301
Query: 411 TEDGQVLSWG 420
T+ G V WG
Sbjct: 302 TQGGHVYMWG 311
Score = 197 (74.4 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 52/168 (30%), Positives = 81/168 (48%)
Query: 304 VTDAGALLTFGWGLYGQC-GHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVE-GR 361
VTD + FG Y C G G L P +L +++ ++ G V +S E G
Sbjct: 37 VTDNDEVFVFGLN-YSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGV 95
Query: 362 VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
VY +G N + QLG G P + T +L K+ V+CG+ HS L DG+V +WG+
Sbjct: 96 VYAWGHNGYSQLGNGTTNQGIAPIQVCTNLL-IKQVVEVACGSHHSMALAADGEVFAWGY 154
Query: 422 NKYGQLGLGDSIDRNIPSLVP--IHGFLPRNIACGWWHTLLLAETTQI 467
N GQ+G G + ++ P V +H IACG ++ + + ++
Sbjct: 155 NNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEV 202
Score = 115 (45.5 bits), Expect = 8.7e-10, Sum P(2) = 8.7e-10
Identities = 27/77 (35%), Positives = 39/77 (50%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
V +I CG H+ +TD G L +G YGQ G G+ N+ L P++ + VE A
Sbjct: 235 VNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHS 294
Query: 351 WHTVCISVEG-RVYVFG 366
HT +G VY++G
Sbjct: 295 AHTSAAKTQGGHVYMWG 311
Score = 104 (41.7 bits), Expect = 3.8e-19, Sum P(2) = 3.8e-19
Identities = 30/107 (28%), Positives = 46/107 (42%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
GT +S ++ LCG K + G L ++E G + WG G S L +G
Sbjct: 55 GTGDNQSTLVPKKLEALCG-KKIKSLSYGSGPHVLLSTEDGVVYAWGH---NGYSQLGNG 110
Query: 90 KHGETPEPFPLPTEA---SVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
+ P + T VV+ A G H +++ GEV+ WG+ C
Sbjct: 111 TTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNC 157
Score = 89 (36.4 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
Identities = 33/116 (28%), Positives = 50/116 (43%)
Query: 21 VVYMWGYLPGTSPEKSPILSPI-PARLCGGDSWKDVCGGGCG--FALATSESGKLITWGS 77
VVY WG+ + I P ++C K V CG ++A + G++ WG
Sbjct: 95 VVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGY 154
Query: 78 ADDEGQSYLTSGKHGETPEPFPLPT---EASVVKAAAGWAHCVSVTEAGEVYTWGW 130
++ GQ + SG P P + VV A G ++V + GEVY WG+
Sbjct: 155 -NNCGQ--VGSGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGY 207
Score = 40 (19.1 bits), Expect = 8.3e-15, Sum P(2) = 8.3e-15
Identities = 9/29 (31%), Positives = 17/29 (58%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILS 228
++P V N +K + +VA G H++ L+
Sbjct: 116 IAPIQVCTNLLIKQVVEVACGSHHSMALA 144
>MGI|MGI:1914388 [details] [associations]
symbol:Herc6 "hect domain and RLD 6" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;IBA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=ISO;IBA] [GO:0006464 "cellular protein modification
process" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0030332 "cyclin binding" evidence=ISO] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IBA] [GO:0045087 "innate immune response"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 MGI:MGI:1914388 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 GO:GO:0005634 GO:GO:0005737 GO:GO:0045087
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0042787 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
CTD:55008 OMA:HIFAGTY EMBL:AC127307 EMBL:AC142212 EMBL:AK017888
EMBL:AK149648 IPI:IPI00850197 RefSeq:NP_080268.1 UniGene:Mm.297393
ProteinModelPortal:F2Z461 SMR:F2Z461 PRIDE:F2Z461
Ensembl:ENSMUST00000031817 GeneID:67138 KEGG:mmu:67138
ChiTaRS:HERC6 NextBio:323692 Bgee:F2Z461 Uniprot:F2Z461
Length = 1003
Score = 228 (85.3 bits), Expect = 2.5e-20, Sum P(2) = 2.5e-20
Identities = 57/175 (32%), Positives = 89/175 (50%)
Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCGHG-STNDQLRPSYASSLMDIQVEQIAAGLW 351
+++CG HS +++ G + ++G GQ G G ++ Q P SL I + Q+AAG
Sbjct: 131 QVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGT 190
Query: 352 HTVCISVEGRVYVFGGNQFGQLG-TGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
H+ +S+ G + +G N+ GQL +G E + K L++ +SCG H+AVL
Sbjct: 191 HSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVL 250
Query: 411 TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAETT 465
TE+GQV ++G N GQL + P L+ G I C +HT+ TT
Sbjct: 251 TEEGQVFTFGGNSSGQLQPSPRSGQRGPQLIEGIGGRVSQIECASYHTIAYVYTT 305
Score = 228 (85.3 bits), Expect = 5.0e-18, Sum P(2) = 5.0e-18
Identities = 57/184 (30%), Positives = 96/184 (52%)
Query: 290 YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND-QLRPSYASSLMDIQVEQIAA 348
+V ++CG HS V G + +G G GQ G G + P+ +L I++ Q++
Sbjct: 75 HVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSC 134
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVD-QAENVPKLLETPILESKRAKVVSCGARHS 407
G +H++ +S +G V+ +G N GQLG G + +++ +P+ +++ LE V+ G HS
Sbjct: 135 GHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKS--LEGIPLAQVAAGGTHS 192
Query: 408 AVLTEDGQVLSWGWNKYGQLGL-GDSIDRNI--P-SLVPIHGFLPRNIACGWWHTLLLAE 463
L+ G WG N+ GQL L G+ + I P S+ + I+CG+ HT +L E
Sbjct: 193 FALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTE 252
Query: 464 TTQI 467
Q+
Sbjct: 253 EGQV 256
Score = 227 (85.0 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 62/186 (33%), Positives = 93/186 (50%)
Query: 285 KAGRSYVK--EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ 342
KAG S ++ + A G HS ++ + + G +GQ G RP +L D+
Sbjct: 16 KAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQALNDLH 75
Query: 343 VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKV--V 400
V+ ++ G H+V + +G+V+ +G GQLG G + + + + T I K+ V
Sbjct: 76 VDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIG--EFKEI-SFMPTKIKALAGIKIIQV 132
Query: 401 SCGARHSAVLTEDGQVLSWGWNKYGQLGLG-DSIDRNIPSLVP-IHGFLPRNIACGWWHT 458
SCG HS L+EDG V SWG N GQLGLG +S + IP V + G +A G H+
Sbjct: 133 SCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHS 192
Query: 459 LLLAET 464
L+ T
Sbjct: 193 FALSLT 198
Score = 100 (40.3 bits), Expect = 6.5e-07, Sum P(3) = 6.5e-07
Identities = 32/98 (32%), Positives = 44/98 (44%)
Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ-VEQIAAGLWH 352
I+CG H+AV+T+ G + TFG G+++ QL+PS S Q +E I +
Sbjct: 240 ISCGYEHTAVLTEEGQVFTFG---------GNSSGQLQPSPRSGQRGPQLIEGIGGRVSQ 290
Query: 353 TVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETP 390
C S YV+ Q LG G N P E P
Sbjct: 291 IECASYHTIAYVYTTGQVVSLGRGPSHTSN-PTHQEAP 327
Score = 91 (37.1 bits), Expect = 2.5e-20, Sum P(2) = 2.5e-20
Identities = 27/106 (25%), Positives = 44/106 (41%)
Query: 25 WGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQS 84
WG L + + PI A D D+ G ++A GK+ WG A EGQ
Sbjct: 51 WGQLGQRRDQSTERPEPIQAL---NDLHVDLVSCGKEHSVAVCHKGKVFAWG-AGSEGQL 106
Query: 85 YLTSGKH-GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ K P +++ + G H ++++E G V++WG
Sbjct: 107 GIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWG 152
Score = 78 (32.5 bits), Expect = 8.1e-05, Sum P(2) = 8.1e-05
Identities = 21/73 (28%), Positives = 33/73 (45%)
Query: 60 CGF--ALATSESGKLITWGSADDEGQSYLTSGKHGET-PEPFPLPTEASVVKAAAGWAHC 116
CG +LA SE G + +WG + EGQ L + P+ + + AAG H
Sbjct: 134 CGHYHSLALSEDGHVFSWGR-NSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHS 192
Query: 117 VSVTEAGEVYTWG 129
+++ G + WG
Sbjct: 193 FALSLTGTSFGWG 205
Score = 69 (29.3 bits), Expect = 3.1e-19, Sum P(3) = 3.1e-19
Identities = 23/89 (25%), Positives = 37/89 (41%)
Query: 43 PARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL 100
P RL G S ++ G +L + ++ + G + GQ + E PEP
Sbjct: 12 PRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGD-NSWGQLGQRRDQSTERPEPIQA 70
Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ V + G H V+V G+V+ WG
Sbjct: 71 LNDLHVDLVSCGKEHSVAVCHKGKVFAWG 99
Score = 52 (23.4 bits), Expect = 3.1e-19, Sum P(3) = 3.1e-19
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 189 SENPASGDEFFTLS--PCLVTLNPGVKITKVAAGGRHTLILSD 229
SE EF +S P + G+KI +V+ G H+L LS+
Sbjct: 102 SEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSE 144
Score = 50 (22.7 bits), Expect = 6.5e-07, Sum P(3) = 6.5e-07
Identities = 9/18 (50%), Positives = 13/18 (72%)
Query: 211 GVKITKVAAGGRHTLILS 228
G+ + +VAAGG H+ LS
Sbjct: 179 GIPLAQVAAGGTHSFALS 196
Score = 40 (19.1 bits), Expect = 5.2e-15, Sum P(2) = 5.2e-15
Identities = 6/17 (35%), Positives = 13/17 (76%)
Query: 211 GVKITKVAAGGRHTLIL 227
G+++ + A+G H+L+L
Sbjct: 21 GIELLQAASGEHHSLLL 37
>MGI|MGI:1890646 [details] [associations]
symbol:Nek8 "NIMA (never in mitosis gene a)-related
expressed kinase 8" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005929 "cilium" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0042995 "cell projection" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0072372 "primary
cilium" evidence=IDA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 MGI:MGI:1890646 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005524 GO:GO:0005737 GO:GO:0005856 GO:GO:0046872
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104137 CTD:284086 HOGENOM:HOG000006908
HOVERGEN:HBG098799 OMA:EREVFAW OrthoDB:EOG4PZJ65 EMBL:AF407579
EMBL:AK154358 EMBL:BC070457 IPI:IPI00135930 RefSeq:NP_543125.1
UniGene:Mm.23788 ProteinModelPortal:Q91ZR4 SMR:Q91ZR4 IntAct:Q91ZR4
MINT:MINT-1341145 STRING:Q91ZR4 PhosphoSite:Q91ZR4 PRIDE:Q91ZR4
Ensembl:ENSMUST00000017549 GeneID:140859 KEGG:mmu:140859
InParanoid:Q91ZR4 NextBio:370021 Bgee:Q91ZR4 Genevestigator:Q91ZR4
GermOnline:ENSMUSG00000017405 Uniprot:Q91ZR4
Length = 698
Score = 259 (96.2 bits), Expect = 2.5e-20, Sum P(2) = 2.5e-20
Identities = 53/157 (33%), Positives = 92/157 (58%)
Query: 284 GKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQV 343
G++G + +K +ACG +A +TD G ++TFG G G GHG+ D +P+ +L+ ++
Sbjct: 393 GQSGVT-IKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGNLTDISQPTIVEALLGYEM 451
Query: 344 EQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCG 403
Q+A G H + +S +G ++ +G G+LG G ++ N P+ + P+ + A+ V CG
Sbjct: 452 VQVACGASHVLALSTDGELFAWGRGDGGRLGLGTRESHNCPQ--QVPVAPGQEAQRVVCG 509
Query: 404 ARHSAVLTEDGQVLSWGWNKYGQLGLGD-SIDRN-IP 438
S +LT G+VL+ G N++ +LGL S+D +P
Sbjct: 510 IDSSMILTSPGRVLACGSNRFNKLGLDHLSLDEEPVP 546
Score = 168 (64.2 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 51/186 (27%), Positives = 89/186 (47%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND---QL-RPSYASSLMD----IQ 342
V ++A G A VT +G L+ + G G G+ +L +P + S ++ +
Sbjct: 340 VVQVAAGRTQKAGVTRSGRLILWEAPPLG-AGGGTLLPGAVELPQPQFVSRFLEGQSGVT 398
Query: 343 VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSC 402
++ +A G T C++ G + FG G LG G + P ++E +L + +V +C
Sbjct: 399 IKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGNLTDISQPTIVEA-LLGYEMVQV-AC 456
Query: 403 GARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIH-GFLPRNIACGWWHTLLL 461
GA H L+ DG++ +WG G+LGLG N P VP+ G + + CG +++L
Sbjct: 457 GASHVLALSTDGELFAWGRGDGGRLGLGTRESHNCPQQVPVAPGQEAQRVVCGIDSSMIL 516
Query: 462 AETTQI 467
++
Sbjct: 517 TSPGRV 522
Score = 162 (62.1 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 51/186 (27%), Positives = 86/186 (46%)
Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQCG--HGSTNDQLRP----SYASSLMDI---Q 342
+ + CG S ++T G +L G + + G H S +++ P A S +
Sbjct: 504 QRVVCGIDSSMILTSPGRVLACGSNRFNKLGLDHLSLDEEPVPYQQVEEALSFTPLGSAP 563
Query: 343 VEQ-----IAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRA 397
++Q + G H+ I+ G Y FG NQ GQLGT + P ++ LE +
Sbjct: 564 LDQEPLLCVDLGTAHSAAITASGDCYTFGSNQHGQLGTSSRRVSRAPCRVQG--LEGIKM 621
Query: 398 KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI---HGFLPRNIACG 454
+V+CG + + +G+V SWG G+LG D D +P V + H ++ +++C
Sbjct: 622 VMVACGDAFTVAVGAEGEVYSWGKGTRGRLGRRDE-DAGLPRPVQLDETHPYMVTSVSCC 680
Query: 455 WWHTLL 460
+TLL
Sbjct: 681 HGNTLL 686
Score = 155 (59.6 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 46/175 (26%), Positives = 78/175 (44%)
Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWH 352
++ACG H ++ G L +G G G+ G G+ P + +++ G+
Sbjct: 453 QVACGASHVLALSTDGELFAWGRGDGGRLGLGTRESHNCPQQVPVAPGQEAQRVVCGIDS 512
Query: 353 TVCISVEGRVYVFGGNQFGQLGT---GVDQA----ENVPKLLE-TPI----LESKRAKVV 400
++ ++ GRV G N+F +LG +D+ + V + L TP+ L+ + V
Sbjct: 513 SMILTSPGRVLACGSNRFNKLGLDHLSLDEEPVPYQQVEEALSFTPLGSAPLDQEPLLCV 572
Query: 401 SCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACG 454
G HSA +T G ++G N++GQLG P V + G +ACG
Sbjct: 573 DLGTAHSAAITASGDCYTFGSNQHGQLGTSSRRVSRAPCRVQGLEGIKMVMVACG 627
Score = 70 (29.7 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 28/106 (26%), Positives = 45/106 (42%)
Query: 28 LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDE--GQ 83
LPG P +R G S + CG F ++ G ++T+GS + G
Sbjct: 375 LPGAVELPQP---QFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGH 431
Query: 84 SYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
LT E L E +V+ A G +H ++++ GE++ WG
Sbjct: 432 GNLTDISQPTIVEAL-LGYE--MVQVACGASHVLALSTDGELFAWG 474
Score = 64 (27.6 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 18/71 (25%), Positives = 27/71 (38%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G LA S G+L WG D G+ L + + P+ P+ + G +
Sbjct: 457 GASHVLALSTDGELFAWGRGDG-GRLGLGTRESHNCPQQVPVAPGQEAQRVVCGIDSSMI 515
Query: 119 VTEAGEVYTWG 129
+T G V G
Sbjct: 516 LTSPGRVLACG 526
Score = 51 (23.0 bits), Expect = 2.5e-20, Sum P(2) = 2.5e-20
Identities = 13/38 (34%), Positives = 16/38 (42%)
Query: 92 GETPEPFPLPT-EASVVKAAAGWAHCVSVTEAGEVYTW 128
G P LP VV+ AAG VT +G + W
Sbjct: 325 GGLSSPLRLPMLNTEVVQVAAGRTQKAGVTRSGRLILW 362
Score = 44 (20.5 bits), Expect = 1.2e-09, Sum P(3) = 1.2e-09
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILS 228
P +V G ++ +VA G H L LS
Sbjct: 440 PTIVEALLGYEMVQVACGASHVLALS 465
>RGD|1306897 [details] [associations]
symbol:Nek8 "NIMA-related kinase 8" species:10116 "Rattus
norvegicus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0072372
"primary cilium" evidence=IEA;ISO] InterPro:IPR000719
InterPro:IPR002290 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 RGD:1306897 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372
PRINTS:PR00633 PROSITE:PS50012 EMBL:CH473948 KO:K08857
GeneTree:ENSGT00700000104137 CTD:284086 OrthoDB:EOG4PZJ65
IPI:IPI00369945 RefSeq:NP_001099274.1 UniGene:Rn.144705
Ensembl:ENSRNOT00000017264 GeneID:287473 KEGG:rno:287473
NextBio:626264 Uniprot:D3ZGQ5
Length = 698
Score = 258 (95.9 bits), Expect = 2.7e-20, Sum P(2) = 2.7e-20
Identities = 51/146 (34%), Positives = 88/146 (60%)
Query: 284 GKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQV 343
G++G + +K +ACG +A +TD G ++TFG G G GHGS D +P+ +L+ ++
Sbjct: 393 GQSGVT-IKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEM 451
Query: 344 EQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCG 403
Q+A G H + +S +G ++ +G G+LG G ++ N P+ + P++ + A+ V CG
Sbjct: 452 VQVACGASHVLALSADGELFAWGRGDGGRLGLGTRESHNCPQ--QVPMVPGQEAQRVVCG 509
Query: 404 ARHSAVLTEDGQVLSWGWNKYGQLGL 429
S +LT G+VL+ G N++ +LGL
Sbjct: 510 IDCSMILTSPGRVLACGSNRFNKLGL 535
Score = 166 (63.5 bits), Expect = 5.7e-09, P = 5.7e-09
Identities = 49/173 (28%), Positives = 82/173 (47%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGH----GSTNDQLRPSYASSLMD----IQ 342
V ++A G A VT +G L+ + G G G+ + +P + S ++ +
Sbjct: 340 VVQVAAGRTQKAGVTRSGRLILWEAPPLGTGGGTLLPGAV-ELPQPQFVSRFLEGQSGVT 398
Query: 343 VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSC 402
++ +A G T C++ G + FG G LG G + P ++E +L + +V +C
Sbjct: 399 IKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEA-LLGYEMVQV-AC 456
Query: 403 GARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACG 454
GA H L+ DG++ +WG G+LGLG N P VP + G + + CG
Sbjct: 457 GASHVLALSADGELFAWGRGDGGRLGLGTRESHNCPQQVPMVPGQEAQRVVCG 509
Score = 152 (58.6 bits), Expect = 4.9e-10, Sum P(2) = 4.9e-10
Identities = 48/186 (25%), Positives = 81/186 (43%)
Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQCG------------HGSTNDQLR-PSYASSL 338
+ + CG S ++T G +L G + + G H + L S+
Sbjct: 504 QRVVCGIDCSMILTSPGRVLACGSNRFNKLGLDCLSLEEEPVPHQQVEEALSFTPLGSAP 563
Query: 339 MDIQVEQ-IAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRA 397
+D + + G H+ ++ G Y FG NQ GQLGT + P ++ LE +
Sbjct: 564 LDRETLLCVDLGTAHSAAVTASGACYTFGSNQHGQLGTSSRRVSRAPCRVQG--LEGIKM 621
Query: 398 KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI---HGFLPRNIACG 454
+V+CG + + +G+V SWG G+LG D D +P V + H + +++C
Sbjct: 622 VMVACGDAFTVAIGAEGEVYSWGKGARGRLGRRDE-DAGLPRPVQLDETHPYTVTSVSCC 680
Query: 455 WWHTLL 460
+TLL
Sbjct: 681 HGNTLL 686
Score = 151 (58.2 bits), Expect = 6.3e-10, Sum P(2) = 6.3e-10
Identities = 46/175 (26%), Positives = 77/175 (44%)
Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWH 352
++ACG H ++ G L +G G G+ G G+ P + + +++ G+
Sbjct: 453 QVACGASHVLALSADGELFAWGRGDGGRLGLGTRESHNCPQQVPMVPGQEAQRVVCGIDC 512
Query: 353 TVCISVEGRVYVFGGNQFGQLGTGVDQAENVP---KLLE-----TPI----LESKRAKVV 400
++ ++ GRV G N+F +LG E P + +E TP+ L+ + V
Sbjct: 513 SMILTSPGRVLACGSNRFNKLGLDCLSLEEEPVPHQQVEEALSFTPLGSAPLDRETLLCV 572
Query: 401 SCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACG 454
G HSA +T G ++G N++GQLG P V + G +ACG
Sbjct: 573 DLGTAHSAAVTASGACYTFGSNQHGQLGTSSRRVSRAPCRVQGLEGIKMVMVACG 627
Score = 70 (29.7 bits), Expect = 4.9e-10, Sum P(2) = 4.9e-10
Identities = 28/106 (26%), Positives = 45/106 (42%)
Query: 28 LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDE--GQ 83
LPG P +R G S + CG F ++ G ++T+GS + G
Sbjct: 375 LPGAVELPQP---QFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGH 431
Query: 84 SYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
LT E L E +V+ A G +H ++++ GE++ WG
Sbjct: 432 GSLTDISQPTIVEAL-LGYE--MVQVACGASHVLALSADGELFAWG 474
Score = 62 (26.9 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 18/71 (25%), Positives = 27/71 (38%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G LA S G+L WG D G+ L + + P+ P+ + G +
Sbjct: 457 GASHVLALSADGELFAWGRGDG-GRLGLGTRESHNCPQQVPMVPGQEAQRVVCGIDCSMI 515
Query: 119 VTEAGEVYTWG 129
+T G V G
Sbjct: 516 LTSPGRVLACG 526
Score = 52 (23.4 bits), Expect = 2.7e-20, Sum P(2) = 2.7e-20
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTW 128
P P+P VV+ AAG VT +G + W
Sbjct: 330 PLRLPMPN-TEVVQVAAGRTQKAGVTRSGRLILW 362
Score = 44 (20.5 bits), Expect = 1.2e-08, Sum P(3) = 1.2e-08
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILS 228
P +V G ++ +VA G H L LS
Sbjct: 440 PTIVEALLGYEMVQVACGASHVLALS 465
>ZFIN|ZDB-GENE-040426-2216 [details] [associations]
symbol:rcc1 "regulator of chromosome condensation
1" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-040426-2216
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104160 KO:K11493 CTD:1104
HOGENOM:HOG000234341 HOVERGEN:HBG017712 OrthoDB:EOG4320Z9
HSSP:P18754 OMA:GTESCFV EMBL:CR855299 EMBL:BC059796 EMBL:BC066721
IPI:IPI00511389 RefSeq:NP_998343.1 UniGene:Dr.77012 SMR:Q6NY65
STRING:Q6NY65 Ensembl:ENSDART00000054026 GeneID:406457
KEGG:dre:406457 InParanoid:Q6NY65 NextBio:20818049 Uniprot:Q6NY65
Length = 418
Score = 202 (76.2 bits), Expect = 6.9e-20, Sum P(2) = 6.9e-20
Identities = 56/185 (30%), Positives = 86/185 (46%)
Query: 287 GRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQI 346
G+ ++ CG + V+ G + FG Y Q G STN P SS + +
Sbjct: 235 GKVVFTDVFCGAYFTFAVSKEGHVYGFGLSNYHQLGTQSTNTCFVPVKLSSFKNSTTSWV 294
Query: 347 --AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA 404
+ G HT+C++ EG+ Y G ++G+LG G D E K T + +VV+CGA
Sbjct: 295 GFSGGQHHTLCLNSEGKAYSLGRAEYGRLGLGKDVGE---KSEPTVVPGISDVQVVACGA 351
Query: 405 RHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP---IHGFLPRNIACGWWHTLLL 461
S +T+ G V SWG QLG G+ D P + + + +++ G HT+LL
Sbjct: 352 SVSYAVTKQGSVFSWGMGTNLQLGTGEEEDEWSPVEMTGKQLENRVVLSVSSGGQHTVLL 411
Query: 462 AETTQ 466
+ Q
Sbjct: 412 VKDKQ 416
Score = 178 (67.7 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 54/144 (37%), Positives = 77/144 (53%)
Query: 306 DAGALLTFGWGLYGQCGHGS-TNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYV 364
+ G +L G G GQ G G ++ +P+ + L + V+ +A G+ HTVC+S G VY
Sbjct: 33 EKGLVLVLGQGDVGQLGLGEDVMERKKPALVT-LPEGIVQAVAGGM-HTVCLSDTGNVYT 90
Query: 365 FGGNQFGQLG--TGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW- 421
FG N G LG T + +E VP ++ L K +V S G HSA LTEDG V WG
Sbjct: 91 FGCNDEGALGRDTSEEGSETVPAKVD---LGEKIIQV-SAGDSHSAALTEDGGVYVWGSF 146
Query: 422 -NKYGQLGLGDSIDR-NIPSLVPI 443
+ G +GL + + + +P VPI
Sbjct: 147 RDNNGVIGLLEPMKKCTVPVKVPI 170
Score = 142 (55.0 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 54/180 (30%), Positives = 81/180 (45%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCG----H----GSTNDQLRPSYASSLM--- 339
V +I G H ++T G L T G G GQ G H G +R ++
Sbjct: 174 VVKIVSGNDHLVMLTAHGELYTSGCGEQGQLGRVAEHFANRGGRKGLMRLLEPQMVIIKP 233
Query: 340 --DIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRA 397
+ + G + T +S EG VY FG + + QLGT VP L + S +
Sbjct: 234 RGKVVFTDVFCGAYFTFAVSKEGHVYGFGLSNYHQLGTQSTNTCFVPVKLSS-FKNSTTS 292
Query: 398 KV-VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSI-DRNIPSLVPIHGFLP-RNIACG 454
V S G H+ L +G+ S G +YG+LGLG + +++ P++VP G + +ACG
Sbjct: 293 WVGFSGGQHHTLCLNSEGKAYSLGRAEYGRLGLGKDVGEKSEPTVVP--GISDVQVVACG 350
Score = 132 (51.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 39/140 (27%), Positives = 72/140 (51%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
V+ +A GG H+ ++D G + TFG G G ++ + A + ++ Q++AG
Sbjct: 70 VQAVA-GGMHTVCLSDTGNVYTFGCNDEGALGRDTSEEGSETVPAKVDLGEKIIQVSAGD 128
Query: 351 WHTVCISVEGRVYVFGG--NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
H+ ++ +G VYV+G + G +G ++ + ++ PI + K+VS G H
Sbjct: 129 SHSAALTEDGGVYVWGSFRDNNGVIGL-LEPMKKCTVPVKVPI-DKPVVKIVS-GNDHLV 185
Query: 409 VLTEDGQVLSWGWNKYGQLG 428
+LT G++ + G + GQLG
Sbjct: 186 MLTAHGELYTSGCGEQGQLG 205
Score = 131 (51.2 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 55/213 (25%), Positives = 93/213 (43%)
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKA--GRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
C + A G+D +GS K G + +++ G HSA +T+ G + + WG +
Sbjct: 93 CNDEGALGRDTS---EEGSETVPAKVDLGEKII-QVSAGDSHSAALTEDGGV--YVWGSF 146
Query: 319 GQCGHGSTNDQLRPSYASSL-----MDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL 373
+ L P ++ +D V +I +G H V ++ G +Y G + GQL
Sbjct: 147 RD--NNGVIGLLEPMKKCTVPVKVPIDKPVVKIVSGNDHLVMLTAHGELYTSGCGEQGQL 204
Query: 374 GTGVDQAEN------VPKLLETPILESK-RAKVVS----CGARHSAVLTEDGQVLSWGWN 422
G + N + +LLE ++ K R KVV CGA + ++++G V +G +
Sbjct: 205 GRVAEHFANRGGRKGLMRLLEPQMVIIKPRGKVVFTDVFCGAYFTFAVSKEGHVYGFGLS 264
Query: 423 KYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGW 455
Y QLG + +P V + F +N W
Sbjct: 265 NYHQLGTQSTNTCFVP--VKLSSF--KNSTTSW 293
Score = 102 (41.0 bits), Expect = 6.9e-20, Sum P(2) = 6.9e-20
Identities = 38/118 (32%), Positives = 52/118 (44%)
Query: 31 TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGS-ADDEGQSYLTSG 89
TS E S +PA++ G+ V G A A +E G + WGS D+ G L
Sbjct: 103 TSEEGS---ETVPAKVDLGEKIIQVSAGDSHSA-ALTEDGGVYVWGSFRDNNGVIGLLEP 158
Query: 90 KHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG 147
T P +P + VVK +G H V +T GE+YT G E +V F + G
Sbjct: 159 MKKCTV-PVKVPIDKPVVKIVSGNDHLVMLTAHGELYTSGCGEQGQLGRVAEHFANRG 215
Score = 95 (38.5 bits), Expect = 3.7e-19, Sum P(2) = 3.7e-19
Identities = 26/95 (27%), Positives = 45/95 (47%)
Query: 35 KSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGET 94
K P L +P + + V GG + S++G + T+G +DEG + + G
Sbjct: 58 KKPALVTLPEGIV-----QAVAGGM--HTVCLSDTGNVYTFG-CNDEGALGRDTSEEGSE 109
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P + +++ +AG +H ++TE G VY WG
Sbjct: 110 TVPAKVDLGEKIIQVSAGDSHSAALTEDGGVYVWG 144
Score = 78 (32.5 bits), Expect = 5.0e-18, Sum P(3) = 5.0e-18
Identities = 25/81 (30%), Positives = 36/81 (44%)
Query: 68 ESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYT 127
E G ++ G D GQ L E +P + +V+A AG H V +++ G VYT
Sbjct: 33 EKGLVLVLGQGD-VGQLGLGEDVM-ERKKPALVTLPEGIVQAVAGGMHTVCLSDTGNVYT 90
Query: 128 WGWRECVPSAKVTRDFGSAGS 148
+G C + RD GS
Sbjct: 91 FG---CNDEGALGRDTSEEGS 108
Score = 63 (27.2 bits), Expect = 7.9e-16, Sum P(2) = 7.9e-16
Identities = 15/27 (55%), Positives = 17/27 (62%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSD 229
P LVTL G I + AGG HT+ LSD
Sbjct: 60 PALVTLPEG--IVQAVAGGMHTVCLSD 84
Score = 41 (19.5 bits), Expect = 5.0e-18, Sum P(3) = 5.0e-18
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSD 229
P V L G KI +V+AG H+ L++
Sbjct: 112 PAKVDL--GEKIIQVSAGDSHSAALTE 136
>UNIPROTKB|F1NUG6 [details] [associations]
symbol:Gga.50841 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005929
"cilium" evidence=IEA] [GO:0007601 "visual perception"
evidence=IEA] [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
GO:GO:0005929 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104160 EMBL:AADN02011054 IPI:IPI00586770
Ensembl:ENSGALT00000026211 OMA:ENGLMFT Uniprot:F1NUG6
Length = 720
Score = 263 (97.6 bits), Expect = 8.7e-20, P = 8.7e-20
Identities = 61/168 (36%), Positives = 89/168 (52%)
Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
I+CG H+AVVT G L FG +GQ G GS N +P+ +L + + G HT
Sbjct: 42 ISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGSKNTVRKPTCVKALKPEKTKLAVCGRNHT 101
Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
+ + +G VY GGN GQLG G D E L + + K ++ G+ SA +TED
Sbjct: 102 LVYTEKGNVYAAGGNSEGQLGLG-DTEERTTFHLISFFTNQHKIKQLAAGSYTSAAVTED 160
Query: 414 GQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLL 461
GQ+ WG N GQ+GL D ++P V + G +I+CG++H+ +
Sbjct: 161 GQLFVWGDNSEGQIGLADKTCVSVPCQVDV-GKPVSSISCGYYHSAFI 207
Score = 213 (80.0 bits), Expect = 9.6e-17, Sum P(2) = 9.6e-17
Identities = 66/182 (36%), Positives = 98/182 (53%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR----PSYASSLMDIQVEQI 346
V I+CG HSA +T G L TFG G+ G +QL+ P +M+ +V ++
Sbjct: 194 VSSISCGYYHSAFITGDGELYTFGEPENGKLG--LLPEQLKNSRVPQPVLGIME-KVNKV 250
Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGAR 405
A G HTV ++ G VY FG Q+GQLG G + +VPK ++ L S + V+CG
Sbjct: 251 ACGGEHTVVLTETG-VYTFGLGQYGQLGHGTLLFKTSVPKSVKH--LRSHKIHNVTCGES 307
Query: 406 HSAVL--TEDGQVLSWGWNKYGQLGLGDSIDRNI--PSLVP-IHGFLPRNIACGWWHTLL 460
H+AV+ TE+G + ++G ++G+LGLG+ N P+L F +ACG H L+
Sbjct: 308 HTAVIADTENGLMFTFGDGRHGKLGLGEENFANQFDPALCSNFLSFTVLLVACGGCHMLV 367
Query: 461 LA 462
A
Sbjct: 368 FA 369
Score = 212 (79.7 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 53/176 (30%), Positives = 91/176 (51%)
Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDI-QVEQIAAGL 350
K CG H+ V T+ G + G GQ G G T ++ S + +++Q+AAG
Sbjct: 92 KLAVCGRNHTLVYTEKGNVYAAGGNSEGQLGLGDTEERTTFHLISFFTNQHKIKQLAAGS 151
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
+ + ++ +G+++V+G N GQ+G +VP ++ K +SCG HSA +
Sbjct: 152 YTSAAVTEDGQLFVWGDNSEGQIGLADKTCVSVPCQVDV----GKPVSSISCGYYHSAFI 207
Query: 411 TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR--NIACGWWHTLLLAET 464
T DG++ ++G + G+LGL +N P+ G + + +ACG HT++L ET
Sbjct: 208 TGDGELYTFGEPENGKLGLLPEQLKNSRVPQPVLGIMEKVNKVACGGEHTVVLTET 263
Score = 211 (79.3 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 56/177 (31%), Positives = 90/177 (50%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
+K++A G SA VT+ G L +G GQ G P + V I+ G
Sbjct: 144 IKQLAAGSYTSAAVTEDGQLFVWGDNSEGQIGLADKTCVSVPCQVD--VGKPVSSISCGY 201
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILE-SKRAKVVSCGARHSAV 409
+H+ I+ +G +Y FG + G+LG +Q +N + P+L ++ V+CG H+ V
Sbjct: 202 YHSAFITGDGELYTFGEPENGKLGLLPEQLKN--SRVPQPVLGIMEKVNKVACGGEHTVV 259
Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDR-NIPSLVP-IHGFLPRNIACGWWHTLLLAET 464
LTE G V ++G +YGQLG G + + ++P V + N+ CG HT ++A+T
Sbjct: 260 LTETG-VYTFGLGQYGQLGHGTLLFKTSVPKSVKHLRSHKIHNVTCGESHTAVIADT 315
Score = 172 (65.6 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 40/124 (32%), Positives = 65/124 (52%)
Query: 346 IAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGAR 405
I+ G HT ++ G++Y+FG N +GQLG G P ++ L+ ++ K+ CG
Sbjct: 42 ISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGSKNTVRKPTCVKA--LKPEKTKLAVCGRN 99
Query: 406 HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI--HGFLPRNIACGWWHTLLLAE 463
H+ V TE G V + G N GQLGLGD+ +R L+ + + +A G + + + E
Sbjct: 100 HTLVYTEKGNVYAAGGNSEGQLGLGDTEERTTFHLISFFTNQHKIKQLAAGSYTSAAVTE 159
Query: 464 TTQI 467
Q+
Sbjct: 160 DGQL 163
Score = 69 (29.3 bits), Expect = 9.6e-17, Sum P(2) = 9.6e-17
Identities = 30/107 (28%), Positives = 43/107 (40%)
Query: 25 WGYLPGTSPEKSPILSPIPARLCGGDSWK-DVCGGGCGFALATSESGKLITWGSADDEGQ 83
WG L G K+ + P + + K VCG L +E G + G + EGQ
Sbjct: 66 WGQL-GLG-SKNTVRKPTCVKALKPEKTKLAVCGRN--HTLVYTEKGNVYAAGG-NSEGQ 120
Query: 84 SYLTSGKHGETPEPFPLPTEASVVKA-AAGWAHCVSVTEAGEVYTWG 129
L + T T +K AAG +VTE G+++ WG
Sbjct: 121 LGLGDTEERTTFHLISFFTNQHKIKQLAAGSYTSAAVTEDGQLFVWG 167
>ZFIN|ZDB-GENE-030131-7951 [details] [associations]
symbol:rcbtb1 "regulator of chromosome
condensation (RCC1) and BTB (POZ) domain containing protein 1"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651
PROSITE:PS50097 SMART:SM00225 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-030131-7951 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
CTD:55213 HOVERGEN:HBG053261 KO:K11494 HSSP:O87916 EMBL:BC045877
IPI:IPI00503126 RefSeq:NP_956285.1 UniGene:Dr.5968
ProteinModelPortal:Q7ZVG0 GeneID:336007 KEGG:dre:336007
InParanoid:Q7ZVG0 NextBio:20811137 ArrayExpress:Q7ZVG0
Uniprot:Q7ZVG0
Length = 531
Score = 260 (96.6 bits), Expect = 9.3e-20, P = 9.3e-20
Identities = 57/180 (31%), Positives = 100/180 (55%)
Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVE 344
+G+ + G H +VT+ G L +G Y Q G+G+TN + P S+ L +V
Sbjct: 72 SGKKLISLSYGSGPHVLLVTEDGELYAWGHNGYSQLGNGTTNQGVSPILVSTNLQGKRVT 131
Query: 345 QIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA 404
+++ G H++ ++ EG V+ +G N GQ+G+G + P+ + L++K ++CG
Sbjct: 132 EVSCGSHHSLALTHEGEVFAWGYNNCGQVGSGSTANQPTPRKVSN-CLQNKVIVNIACGQ 190
Query: 405 RHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS-LVPIHGFLPRNIACGWWHTLLLAE 463
S +T++G+V WG+N GQLGLG++ ++ P L+ + GF IA G+ H+L L +
Sbjct: 191 TSSMAVTDNGEVYGWGYNGNGQLGLGNNGNQLTPCRLIALQGFCVLQIASGYAHSLALTD 250
Score = 218 (81.8 bits), Expect = 5.8e-15, P = 5.8e-15
Identities = 58/168 (34%), Positives = 86/168 (51%)
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
P+LV S N GK V E++CG HS +T G + +G+ GQ G GST +Q
Sbjct: 118 PILV---STNLQGKR----VTEVSCGSHHSLALTHEGEVFAWGYNNCGQVGSGSTANQPT 170
Query: 332 PSYASSLMDIQV-EQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETP 390
P S+ + +V IA G ++ ++ G VY +G N GQLG G + + P L
Sbjct: 171 PRKVSNCLQNKVIVNIACGQTSSMAVTDNGEVYGWGYNGNGQLGLGNNGNQLTPCRLIA- 229
Query: 391 ILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP 438
L+ ++ G HS LT++G + +WG N YGQLG G+ ++ P
Sbjct: 230 -LQGFCVLQIASGYAHSLALTDEGLLYAWGANTYGQLGTGNKSNQLSP 276
Score = 206 (77.6 bits), Expect = 9.3e-20, Sum P(2) = 9.3e-20
Identities = 51/134 (38%), Positives = 73/134 (54%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYG--QCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
+ IACG S VTD G + +GWG G Q G G+ +QL P +L V QIA+
Sbjct: 183 IVNIACGQTSSMAVTDNGEV--YGWGYNGNGQLGLGNNGNQLTPCRLIALQGFCVLQIAS 240
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKR-AKVVSCGARH- 406
G H++ ++ EG +Y +G N +GQLGTG + P + T E +R ++ +C + H
Sbjct: 241 GYAHSLALTDEGLLYAWGANTYGQLGTGNKSNQLSPVQVMT---EKERIVEIAACHSTHT 297
Query: 407 SAVLTEDGQVLSWG 420
SA T+ GQV WG
Sbjct: 298 SAAKTQSGQVYMWG 311
Score = 198 (74.8 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 43/149 (28%), Positives = 77/149 (51%)
Query: 322 GHGSTNDQLRPSYASSLMDIQVEQIAAGLW-HTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
G G + + P L ++ ++ G H + ++ +G +Y +G N + QLG G
Sbjct: 55 GTGDSQSTIAPKKLDCLSGKKLISLSYGSGPHVLLVTEDGELYAWGHNGYSQLGNGTTN- 113
Query: 381 ENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSL 440
+ V +L + L+ KR VSCG+ HS LT +G+V +WG+N GQ+G G + ++ P
Sbjct: 114 QGVSPILVSTNLQGKRVTEVSCGSHHSLALTHEGEVFAWGYNNCGQVGSGSTANQPTPRK 173
Query: 441 VP--IHGFLPRNIACGWWHTLLLAETTQI 467
V + + NIACG ++ + + ++
Sbjct: 174 VSNCLQNKVIVNIACGQTSSMAVTDNGEV 202
Score = 146 (56.5 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 40/117 (34%), Positives = 60/117 (51%)
Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGAR-HSAVLTE 412
+ I+ + VYV G N LGTG Q+ PK L+ L K+ +S G+ H ++TE
Sbjct: 35 IYITHDDEVYVLGLNCSNCLGTGDSQSTIAPKKLDC--LSGKKLISLSYGSGPHVLLVTE 92
Query: 413 DGQVLSWGWNKYGQLGLGDSIDRNIPSLVP--IHGFLPRNIACGWWHTLLLAETTQI 467
DG++ +WG N Y QLG G + P LV + G ++CG H+L L ++
Sbjct: 93 DGELYAWGHNGYSQLGNGTTNQGVSPILVSTNLQGKRVTEVSCGSHHSLALTHEGEV 149
Score = 101 (40.6 bits), Expect = 9.3e-20, Sum P(2) = 9.3e-20
Identities = 29/107 (27%), Positives = 44/107 (41%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
GT +S I +P G + G L +E G+L WG G S L +G
Sbjct: 55 GTGDSQSTI-APKKLDCLSGKKLISLSYGSGPHVLLVTEDGELYAWGH---NGYSQLGNG 110
Query: 90 KHGETPEPFPLPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWREC 133
+ P + T V + + G H +++T GEV+ WG+ C
Sbjct: 111 TTNQGVSPILVSTNLQGKRVTEVSCGSHHSLALTHEGEVFAWGYNNC 157
Score = 58 (25.5 bits), Expect = 2.8e-15, Sum P(2) = 2.8e-15
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 201 LSPCLVTLN-PGVKITKVAAGGRHTLILS 228
+SP LV+ N G ++T+V+ G H+L L+
Sbjct: 116 VSPILVSTNLQGKRVTEVSCGSHHSLALT 144
>UNIPROTKB|Q9N1T2 [details] [associations]
symbol:RPGR "X-linked retinitis pigmentosa GTPase
regulator" species:9615 "Canis lupus familiaris" [GO:0036126 "sperm
flagellum" evidence=ISS] [GO:0036064 "cilium basal body"
evidence=ISS] [GO:0042073 "intraflagellar transport" evidence=ISS]
[GO:0042384 "cilium assembly" evidence=ISS] [GO:0005813
"centrosome" evidence=ISS] [GO:0007601 "visual perception"
evidence=ISS] [GO:0005794 "Golgi apparatus" evidence=ISS]
[GO:0035085 "cilium axoneme" evidence=IEA] [GO:0050896 "response to
stimulus" evidence=IEA] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005794 GO:GO:0005813 GO:GO:0007601 GO:GO:0050896
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085
GO:GO:0042384 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042073 eggNOG:COG5184 GO:GO:0036064
GO:GO:0036126 EMBL:AF148798 EMBL:AF148799 EMBL:AF148800
EMBL:AF148801 RefSeq:NP_001003126.1 UniGene:Cfa.3592
ProteinModelPortal:Q9N1T2 STRING:Q9N1T2 GeneID:403726
KEGG:cfa:403726 CTD:6103 HOGENOM:HOG000231314 HOVERGEN:HBG026899
InParanoid:Q9N1T2 NextBio:20817229 Uniprot:Q9N1T2
Length = 1003
Score = 251 (93.4 bits), Expect = 3.5e-18, P = 3.5e-18
Identities = 61/174 (35%), Positives = 92/174 (52%)
Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
++CG H+AVVT L FG +GQ G GS + +P+ +L +V+ A G HT
Sbjct: 40 LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHT 99
Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
+ + G+VY GGN GQLG G D E L + ++ K +S G+ SA LTED
Sbjct: 100 LVSTEGGKVYAAGGNNEGQLGLG-DTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTED 158
Query: 414 GQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
G++ WG N GQ+GL + + +P V + G I+CG++H+ + Q+
Sbjct: 159 GELFMWGDNSEGQIGLENVTNVCVPQQVTV-GKPISWISCGYYHSAFVTTEGQL 211
Score = 237 (88.5 bits), Expect = 1.7e-19, Sum P(2) = 1.7e-19
Identities = 65/177 (36%), Positives = 102/177 (57%)
Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYA--SSLMDI--QVEQIAAG 349
I+CG HSA VT G L TFG +CG +QL ++ + I +V Q+A G
Sbjct: 195 ISCGYYHSAFVTTEGQLYTFG---EPECGKLGLPNQLLVNHRMPQPVPGIPGKVVQVACG 251
Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGARHSA 408
HTV ++ E VY FG QFGQLG G E +VPK +E ++ ++ ++CG H+A
Sbjct: 252 GGHTVVLT-EKAVYTFGLGQFGQLGLGTFLFETSVPKAIEH--IKDQKISFIACGENHTA 308
Query: 409 VLTEDGQVLSWGWNKYGQLGLG--DSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLA 462
++T+ G + ++G ++G+LGLG +S ++ IP+L F+ + ++CG HTL+ A
Sbjct: 309 LITDMGLMYTFGDGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCGGCHTLVFA 365
Score = 203 (76.5 bits), Expect = 8.0e-13, P = 8.0e-13
Identities = 55/178 (30%), Positives = 95/178 (53%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ--VEQIAA 348
VK ACG H+ V T+ G + G GQ G G T ++ + S Q ++Q++A
Sbjct: 89 VKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEER-STFHLISFFTSQRKIKQLSA 147
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
G + ++ +G ++++G N GQ+G ++ NV + + K +SCG HSA
Sbjct: 148 GSNTSAALTEDGELFMWGDNSEGQIG--LENVTNV--CVPQQVTVGKPISWISCGYYHSA 203
Query: 409 VLTEDGQVLSWGWNKYGQLGLGDS--IDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
+T +GQ+ ++G + G+LGL + ++ +P VP I G + + +ACG HT++L E
Sbjct: 204 FVTTEGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPGKVVQ-VACGGGHTVVLTE 260
Score = 186 (70.5 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 51/175 (29%), Positives = 87/175 (49%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
+K+++ G SA +T+ G L +G GQ G + + P + + + I+ G
Sbjct: 142 IKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNVCVPQQVT--VGKPISWISCGY 199
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
+H+ ++ EG++Y FG + G+LG N P + K +V +CG H+ VL
Sbjct: 200 YHSAFVTTEGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPGKVVQV-ACGGGHTVVL 258
Query: 411 TEDGQVLSWGWNKYGQLGLGDSI-DRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
TE V ++G ++GQLGLG + + ++P + I IACG HT L+ +
Sbjct: 259 TEKA-VYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENHTALITD 312
Score = 73 (30.8 bits), Expect = 1.7e-19, Sum P(2) = 1.7e-19
Identities = 30/107 (28%), Positives = 45/107 (42%)
Query: 25 WGYLPGTSPEKSPILSPIPARLCGGDSWK-DVCGGGCGFALATSESGKLITWGSADDEGQ 83
WG L G KS + P + + K CG L ++E GK+ G ++EGQ
Sbjct: 64 WGQL-GLG-SKSTVSKPTCVKALKPEKVKFAACGRN--HTLVSTEGGKVYAAGG-NNEGQ 118
Query: 84 SYLTSGKHGETPEPFPLPTEASVVKA-AAGWAHCVSVTEAGEVYTWG 129
L + T T +K +AG ++TE GE++ WG
Sbjct: 119 LGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTEDGELFMWG 165
>ZFIN|ZDB-GENE-090313-139 [details] [associations]
symbol:herc3 "hect domain and RLD 3" species:7955
"Danio rerio" [GO:0006464 "cellular protein modification process"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-090313-139
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00660000095216 CTD:8916 HOGENOM:HOG000208452
HOVERGEN:HBG050878 OMA:SPAVDFR OrthoDB:EOG4RBQHS EMBL:CU467858
IPI:IPI00901161 RefSeq:NP_001139096.1 UniGene:Dr.86009
Ensembl:ENSDART00000112994 Ensembl:ENSDART00000141977
GeneID:100003587 NextBio:20785898 Uniprot:B8JLD4
Length = 1046
Score = 236 (88.1 bits), Expect = 5.6e-16, Sum P(2) = 5.6e-16
Identities = 59/179 (32%), Positives = 91/179 (50%)
Query: 287 GRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQI 346
GR +KE+ACG +HS + G++ T G GQ GH RP +L ++ +
Sbjct: 33 GRG-LKEVACGNQHSLFLLHDGSVYTCGSNSCGQLGHDKGGS--RPELVGALDAQKISGV 89
Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGV-DQAENVPKLLETPILESKRAKVVSCGAR 405
+ G H++ ++ +G+V+ +G GQLG G ++A VP+L++ L R V CG
Sbjct: 90 SCGQAHSLAVNEQGQVFAWGAGDGGQLGLGTAEEAVRVPRLIKK--LCEHRISQVMCGNH 147
Query: 406 HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI-PS-LVPIHGFLPRNIACGWWHTLLLA 462
H L++DGQ+ WG N GQLGLG + P L + G I+ G H+ L+
Sbjct: 148 HCIALSKDGQLFVWGENSSGQLGLGKGEPSTLSPQPLKSLCGIPLTQISAGGDHSFALS 206
Score = 228 (85.3 bits), Expect = 2.5e-19, Sum P(2) = 2.5e-19
Identities = 58/177 (32%), Positives = 87/177 (49%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQ-LRPSYASSLMDIQVEQIAAG 349
+ ++ CG H ++ G L +G GQ G G L P SL I + QI+AG
Sbjct: 139 ISQVMCGNHHCIALSKDGQLFVWGENSSGQLGLGKGEPSTLSPQPLKSLCGIPLTQISAG 198
Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
H+ +S G V+ +G N GQLG +Q VP ++ L S++ +SCG H+A
Sbjct: 199 GDHSFALSFSGAVFGWGKNSAGQLGLNDEQDRAVPCHIK--FLRSQKVVYISCGEEHTAA 256
Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACGWWHTLLLAETT 465
LT++G + ++G GQLG + + +P V + G IACG HTL +T
Sbjct: 257 LTKEGGLFTFGNGSKGQLGHDSTRNEPLPRRVMELMGTEVSQIACGRNHTLAFVPST 313
Score = 187 (70.9 bits), Expect = 4.1e-15, Sum P(2) = 4.1e-15
Identities = 55/171 (32%), Positives = 82/171 (47%)
Query: 293 EIACGGRHSAVVTDAGALLTFGWGLY--GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
+I+ GG HS ++ +GA+ FGWG GQ G D+ P + L +V I+ G
Sbjct: 194 QISAGGDHSFALSFSGAV--FGWGKNSAGQLGLNDEQDRAVPCHIKFLRSQKVVYISCGE 251
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKV--VSCGARHS- 407
HT ++ EG ++ FG GQLG D N P L ++E +V ++CG H+
Sbjct: 252 EHTAALTKEGGLFTFGNGSKGQLGH--DSTRNEP--LPRRVMELMGTEVSQIACGRNHTL 307
Query: 408 AVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHT 458
A + G + ++G N GQLG G I + S VP+ P I + T
Sbjct: 308 AFVPSTGLIYAFGCNTQGQLGTG--IRGSAKSPVPVSNIQPLCIGNAYTRT 356
Score = 179 (68.1 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 48/161 (29%), Positives = 84/161 (52%)
Query: 310 LLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ-VEQIAAGLWHTVCISVEGRVYVFGGN 368
+L +G GQ G G++ + + + D + ++++A G H++ + +G VY G N
Sbjct: 2 MLCWGSSGAGQLGIGASEASVFEPRSCCVFDGRGLKEVACGNQHSLFLLHDGSVYTCGSN 61
Query: 369 QFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLG 428
GQLG D+ + P+L+ L++++ VSCG HS + E GQV +WG GQLG
Sbjct: 62 SCGQLGH--DKGGSRPELVGA--LDAQKISGVSCGQAHSLAVNEQGQVFAWGAGDGGQLG 117
Query: 429 LGDSIDR-NIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
LG + + +P L+ + + CG H + L++ Q+
Sbjct: 118 LGTAEEAVRVPRLIKKLCEHRISQVMCGNHHCIALSKDGQL 158
Score = 104 (41.7 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 38/186 (20%), Positives = 67/186 (36%)
Query: 46 LCGGDSWKDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPT 102
L G + + G CG A LA +E G++ WG A D GQ L + + P
Sbjct: 77 LVGALDAQKISGVSCGQAHSLAVNEQGQVFAWG-AGDGGQLGLGTAEEAVRVPRLIKKLC 135
Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
E + + G HC+++++ G+++ WG S ++ G + +P
Sbjct: 136 EHRISQVMCGNHHCIALSKDGQLFVWGENS---SGQLGLGKGEPSTLSPQPLKSLCGIPL 192
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
Q + + + DE PC + K+ ++ G
Sbjct: 193 TQISAGGDHSFALSFSGAVFGWGKNSAGQLGLNDEQDRAVPCHIKFLRSQKVVYISCGEE 252
Query: 223 HTLILS 228
HT L+
Sbjct: 253 HTAALT 258
Score = 86 (35.3 bits), Expect = 4.1e-15, Sum P(2) = 4.1e-15
Identities = 27/101 (26%), Positives = 47/101 (46%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
GT+ E + I +LC + +CG +A S+ G+L WG + GQ L G
Sbjct: 119 GTAEEAVRVPRLIK-KLCEHRISQVMCGNH--HCIALSKDGQLFVWGE-NSSGQLGLGKG 174
Query: 90 KHGE-TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ +P+P + + +AG H +++ +G V+ WG
Sbjct: 175 EPSTLSPQPLKSLCGIPLTQISAGGDHSFALSFSGAVFGWG 215
Score = 82 (33.9 bits), Expect = 2.5e-19, Sum P(2) = 2.5e-19
Identities = 28/101 (27%), Positives = 42/101 (41%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDV-CGGGCGFALATSESGKLITWGSADDEGQSYLTS 88
G ++ + P + G K+V CG +L G + T GS + GQ L
Sbjct: 14 GIGASEASVFEPRSCCVFDGRGLKEVACGNQ--HSLFLLHDGSVYTCGS-NSCGQ--LGH 68
Query: 89 GKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
K G PE + + G AH ++V E G+V+ WG
Sbjct: 69 DKGGSRPELVGALDAQKISGVSCGQAHSLAVNEQGQVFAWG 109
Score = 70 (29.7 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 17/52 (32%), Positives = 23/52 (44%)
Query: 291 VKEIACGGRHS-AVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDI 341
V +IACG H+ A V G + FG GQ G G P S++ +
Sbjct: 296 VSQIACGRNHTLAFVPSTGLIYAFGCNTQGQLGTGIRGSAKSPVPVSNIQPL 347
Score = 43 (20.2 bits), Expect = 4.6e-15, Sum P(3) = 4.6e-15
Identities = 15/63 (23%), Positives = 26/63 (41%)
Query: 72 LITWGSADDEGQSYLTSGKHGE-TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
++ WGS+ GQ + + + P + + + A G H + + G VYT G
Sbjct: 2 MLCWGSSG-AGQLGIGASEASVFEPRSCCVFDGRGLKEVACGNQHSLFLLHDGSVYTCGS 60
Query: 131 REC 133
C
Sbjct: 61 NSC 63
Score = 41 (19.5 bits), Expect = 5.6e-16, Sum P(2) = 5.6e-16
Identities = 13/35 (37%), Positives = 17/35 (48%)
Query: 193 ASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL 227
AS F C V G+K +VA G +H+L L
Sbjct: 17 ASEASVFEPRSCCVFDGRGLK--EVACGNQHSLFL 49
Score = 38 (18.4 bits), Expect = 4.6e-15, Sum P(3) = 4.6e-15
Identities = 17/66 (25%), Positives = 25/66 (37%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMXXXXXXXXXXXXXXXXXSRIKMVPTPHLIPCL 262
P LV KI+ V+ G H+L +++ + + V P LI L
Sbjct: 75 PELVGALDAQKISGVSCGQAHSLAVNEQGQVFAWGAGDGGQLGLGTAEEAVRVPRLIKKL 134
Query: 263 -EHAAS 267
EH S
Sbjct: 135 CEHRIS 140
>UNIPROTKB|E1BVG2 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104208 OMA:NCSNCLG EMBL:AADN02005390
IPI:IPI00590638 Ensembl:ENSGALT00000027473 Uniprot:E1BVG2
Length = 531
Score = 256 (95.2 bits), Expect = 2.7e-19, P = 2.7e-19
Identities = 56/176 (31%), Positives = 97/176 (55%)
Query: 291 VKEIACG-GRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP-SYASSLMDIQVEQIAA 348
+ ++ G G H + T+ G + +G Y Q G+G+TN + P ++L+ +V ++A
Sbjct: 76 ISSLSYGSGPHVLLCTEDGEVYAWGHNGYSQLGNGATNQGVTPVQVCTNLLLKKVIEVAC 135
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
G H++ +S +G +Y +G N GQ+G+G + P+ + L+ K ++CG S
Sbjct: 136 GSHHSMALSFDGDLYAWGYNNCGQVGSGSTANQPTPRRVSN-CLQDKMVVGIACGQTSSM 194
Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
+ +G+V WG+N GQLGLG++ ++ P V +HG IACG+ HTL L +
Sbjct: 195 AVVNNGEVYGWGYNGNGQLGLGNNGNQLTPCRVAALHGVCILQIACGYAHTLALTD 250
Score = 215 (80.7 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 53/149 (35%), Positives = 76/149 (51%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVEQIAAG 349
V E+ACG HS ++ G L +G+ GQ G GST +Q P S+ L D V IA G
Sbjct: 130 VIEVACGSHHSMALSFDGDLYAWGYNNCGQVGSGSTANQPTPRRVSNCLQDKMVVGIACG 189
Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
++ + G VY +G N GQLG G + + P L ++CG H+
Sbjct: 190 QTSSMAVVNNGEVYGWGYNGNGQLGLGNNGNQLTP--CRVAALHGVCILQIACGYAHTLA 247
Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNIP 438
LT++G + +WG N YGQLG G+ ++ P
Sbjct: 248 LTDEGLLYAWGANTYGQLGTGNKSNQLSP 276
Score = 203 (76.5 bits), Expect = 2.6e-19, Sum P(2) = 2.6e-19
Identities = 48/131 (36%), Positives = 73/131 (55%)
Query: 294 IACGGRHSAVVTDAGALLTFGWGLYG--QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW 351
IACG S V + G + +GWG G Q G G+ +QL P ++L + + QIA G
Sbjct: 186 IACGQTSSMAVVNNGEV--YGWGYNGNGQLGLGNNGNQLTPCRVAALHGVCILQIACGYA 243
Query: 352 HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRA-KVVSCGARH-SAV 409
HT+ ++ EG +Y +G N +GQLGTG + P + ++E +R ++ +C + H SA
Sbjct: 244 HTLALTDEGLLYAWGANTYGQLGTGNKSNQLSPLQI---MMEKERVVEIAACHSAHTSAA 300
Query: 410 LTEDGQVLSWG 420
T+ GQV WG
Sbjct: 301 KTQSGQVYMWG 311
Score = 172 (65.6 bits), Expect = 7.9e-10, P = 7.9e-10
Identities = 42/161 (26%), Positives = 75/161 (46%)
Query: 310 LLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW-HTVCISVEGRVYVFGGN 368
+ FG G G + + P +L ++ ++ G H + + +G VY +G N
Sbjct: 43 VFVFGLNCSNCLGTGDSQSTIVPKKLEALCGKKISSLSYGSGPHVLLCTEDGEVYAWGHN 102
Query: 369 QFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLG 428
+ QLG G P + T +L K+ V+CG+ HS L+ DG + +WG+N GQ+G
Sbjct: 103 GYSQLGNGATNQGVTPVQVCTNLL-LKKVIEVACGSHHSMALSFDGDLYAWGYNNCGQVG 161
Query: 429 LGDSIDRNIPSLVP--IHGFLPRNIACGWWHTLLLAETTQI 467
G + ++ P V + + IACG ++ + ++
Sbjct: 162 SGSTANQPTPRRVSNCLQDKMVVGIACGQTSSMAVVNNGEV 202
Score = 114 (45.2 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 27/77 (35%), Positives = 40/77 (51%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
+ +IACG H+ +TD G L +G YGQ G G+ ++QL P + VE A
Sbjct: 235 ILQIACGYAHTLALTDEGLLYAWGANTYGQLGTGNKSNQLSPLQIMMEKERVVEIAACHS 294
Query: 351 WHTVCISVE-GRVYVFG 366
HT + G+VY++G
Sbjct: 295 AHTSAAKTQSGQVYMWG 311
Score = 100 (40.3 bits), Expect = 2.6e-19, Sum P(2) = 2.6e-19
Identities = 30/107 (28%), Positives = 46/107 (42%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
GT +S I+ LCG G G L T E G++ WG G S L +G
Sbjct: 55 GTGDSQSTIVPKKLEALCGKKISSLSYGSGPHVLLCT-EDGEVYAWGH---NGYSQLGNG 110
Query: 90 KHGETPEPFPLPTEA---SVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
+ P + T V++ A G H ++++ G++Y WG+ C
Sbjct: 111 ATNQGVTPVQVCTNLLLKKVIEVACGSHHSMALSFDGDLYAWGYNNC 157
Score = 92 (37.4 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
Identities = 35/116 (30%), Positives = 50/116 (43%)
Query: 22 VYMWGYLPGTSPEKSPILSP--IPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGS 77
VY WG+ G S + + P ++C K V CG ++A S G L WG
Sbjct: 96 VYAWGH-NGYSQLGNGATNQGVTPVQVCTNLLLKKVIEVACGSHHSMALSFDGDLYAWGY 154
Query: 78 ADDEGQSYLTSGKHGETPEPFPLPT---EASVVKAAAGWAHCVSVTEAGEVYTWGW 130
++ GQ + SG P P + + VV A G ++V GEVY WG+
Sbjct: 155 -NNCGQ--VGSGSTANQPTPRRVSNCLQDKMVVGIACGQTSSMAVVNNGEVYGWGY 207
Score = 64 (27.6 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSD 229
L+PC V GV I ++A G HTL L+D
Sbjct: 222 LTPCRVAALHGVCILQIACGYAHTLALTD 250
Score = 40 (19.1 bits), Expect = 4.5e-13, Sum P(2) = 4.5e-13
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 213 KITKVAAGGRHTLILS 228
K+ +VA G H++ LS
Sbjct: 129 KVIEVACGSHHSMALS 144
>TAIR|locus:2009739 [details] [associations]
symbol:AT1G65920 species:3702 "Arabidopsis thaliana"
[GO:0005543 "phospholipid binding" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=ISM] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005773 "vacuole" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] InterPro:IPR000306
InterPro:IPR001849 Pfam:PF01363 SMART:SM00064 SMART:SM00233
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0005773 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0046872 EMBL:AC009513
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184 InterPro:IPR013591
Pfam:PF08381 PROSITE:PS51514 HSSP:Q15075 HOGENOM:HOG000240974
IPI:IPI00526779 PIR:E96683 RefSeq:NP_176767.1 UniGene:At.35824
ProteinModelPortal:Q9SRZ7 SMR:Q9SRZ7 PaxDb:Q9SRZ7 PRIDE:Q9SRZ7
EnsemblPlants:AT1G65920.1 GeneID:842904 KEGG:ath:AT1G65920
TAIR:At1g65920 InParanoid:Q9SRZ7 OMA:AQADSWF PhylomeDB:Q9SRZ7
ProtClustDB:CLSN2679687 Genevestigator:Q9SRZ7 Uniprot:Q9SRZ7
Length = 1006
Score = 233 (87.1 bits), Expect = 3.2e-19, Sum P(2) = 3.2e-19
Identities = 63/180 (35%), Positives = 92/180 (51%)
Query: 288 RSYVKEIACGGRHSAVVTDA------------GALLTFGWGLYGQCGHGSTNDQLRPSYA 335
R V ++CG H+A + + G L T+G G G+ GH + +L P+
Sbjct: 446 RMKVISVSCGPWHTAAIVETANDRKFYNAKSCGKLFTWGDGDKGRLGHADSKRKLVPTCV 505
Query: 336 SSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESK 395
+ L+D +++ G TV +S+ G VY G + GQLG + ++V +L L +
Sbjct: 506 TELIDHDFIKVSCGWTLTVALSISGTVYTMGSSIHGQLGCPRAKDKSVNVVLGN--LTRQ 563
Query: 396 RAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-PIHGFLPRNIACG 454
K ++ G+ H AVLT G V +WG GQLGLGD DRN P LV P+ L +IACG
Sbjct: 564 FVKDIASGSHHVAVLTSFGNVYTWGKGMNGQLGLGDVRDRNSPVLVEPLGDRLVESIACG 623
Score = 201 (75.8 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 57/189 (30%), Positives = 94/189 (49%)
Query: 287 GRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQI 346
G V +ACG H+A+VT +G L T+G G +G GHGS +P SL ++V +
Sbjct: 393 GSLTVLSVACGAWHTAIVTSSGQLFTYGSGTFGVLGHGSLESVTKPKEVESLRRMKVISV 452
Query: 347 AAGLWHTVCISVE-------------GRVYVFGGNQFGQLGTGVDQAENVPKLLETPILE 393
+ G WHT I VE G+++ +G G+LG + + VP + T +++
Sbjct: 453 SCGPWHTAAI-VETANDRKFYNAKSCGKLFTWGDGDKGRLGHADSKRKLVPTCV-TELID 510
Query: 394 SKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIA 452
KV SCG + L+ G V + G + +GQLG + D+++ ++ + ++IA
Sbjct: 511 HDFIKV-SCGWTLTVALSISGTVYTMGSSIHGQLGCPRAKDKSVNVVLGNLTRQFVKDIA 569
Query: 453 CGWWHTLLL 461
G H +L
Sbjct: 570 SGSHHVAVL 578
Score = 195 (73.7 bits), Expect = 6.6e-15, Sum P(2) = 6.6e-15
Identities = 55/188 (29%), Positives = 88/188 (46%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLM-DIQVEQIAAG 349
V+ +AC + VT++G L + WG+ G S + L + L + V +A G
Sbjct: 346 VRSVACSDHQTCAVTESGEL--YLWGIDGGTIEQSGSQFLTRKISDVLGGSLTVLSVACG 403
Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
WHT ++ G+++ +G FG LG G E+V K E L + VSCG H+A
Sbjct: 404 AWHTAIVTSSGQLFTYGSGTFGVLGHG--SLESVTKPKEVESLRRMKVISVSCGPWHTAA 461
Query: 410 LTED------------GQVLSWGWNKYGQLGLGDSIDRNIPSLVPI---HGFLPRNIACG 454
+ E G++ +WG G+LG DS + +P+ V H F+ ++CG
Sbjct: 462 IVETANDRKFYNAKSCGKLFTWGDGDKGRLGHADSKRKLVPTCVTELIDHDFI--KVSCG 519
Query: 455 WWHTLLLA 462
W T+ L+
Sbjct: 520 WTLTVALS 527
Score = 185 (70.2 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 50/177 (28%), Positives = 84/177 (47%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
V+ I+ G +H+A+VT G + +G G G+ G D P SL D+ V +A
Sbjct: 294 VQSISLGAKHAALVTRQGEVFCWGNGNSGKLGLKVNIDIDHPKRVESLEDVAVRSVACSD 353
Query: 351 WHTVCISVEGRVYVFG--GNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
T ++ G +Y++G G Q G+ + + + + + S V+CGA H+A
Sbjct: 354 HQTCAVTESGELYLWGIDGGTIEQSGS-----QFLTRKISDVLGGSLTVLSVACGAWHTA 408
Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAET 464
++T GQ+ ++G +G LG G P V + +++CG WHT + ET
Sbjct: 409 IVTSSGQLFTYGSGTFGVLGHGSLESVTKPKEVESLRRMKVISVSCGPWHTAAIVET 465
Score = 159 (61.0 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 45/158 (28%), Positives = 76/158 (48%)
Query: 315 WG-LYGQC-GHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQ 372
WG + G G + ND L P S V+ I+ G H ++ +G V+ +G G+
Sbjct: 264 WGAITGLIDGSKNQNDALSPKLLESATMFDVQSISLGAKHAALVTRQGEVFCWGNGNSGK 323
Query: 373 LGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDS 432
LG V+ + PK +E+ LE + V+C + +TE G++ WG + G + S
Sbjct: 324 LGLKVNIDIDHPKRVES--LEDVAVRSVACSDHQTCAVTESGELYLWGIDG-GTIEQSGS 380
Query: 433 --IDRNIPSLVPIHGFLP-RNIACGWWHTLLLAETTQI 467
+ R I + + G L ++ACG WHT ++ + Q+
Sbjct: 381 QFLTRKISDV--LGGSLTVLSVACGAWHTAIVTSSGQL 416
Score = 130 (50.8 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 35/84 (41%), Positives = 44/84 (52%)
Query: 279 SVNSS-GKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS 337
SVN G R +VK+IA G H AV+T G + T+G G+ GQ G G D+ P
Sbjct: 552 SVNVVLGNLTRQFVKDIASGSHHVAVLTSFGNVYTWGKGMNGQLGLGDVRDRNSPVLVEP 611
Query: 338 LMDIQVEQIAAGLWHT--VCISVE 359
L D VE IA GL T +C+ E
Sbjct: 612 LGDRLVESIACGLNLTAAICLHKE 635
Score = 80 (33.2 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 19/60 (31%), Positives = 28/60 (46%)
Query: 70 GKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
GKL TWG D +G+ K P + +K + GW V+++ +G VYT G
Sbjct: 478 GKLFTWGDGD-KGRLGHADSKRKLVPTCVTELIDHDFIKVSCGWTLTVALSISGTVYTMG 536
Score = 75 (31.5 bits), Expect = 3.2e-19, Sum P(2) = 3.2e-19
Identities = 28/113 (24%), Positives = 48/113 (42%)
Query: 22 VYMWGYLPGT---SPEKSPILSPIPARLCGGDSWKDV--CGGGCGFALATSESGKLITWG 76
+ +WG + G S ++ LSP +L + DV G A + G++ WG
Sbjct: 261 IMIWGAITGLIDGSKNQNDALSP---KLLESATMFDVQSISLGAKHAALVTRQGEVFCWG 317
Query: 77 SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ + G+ L + P+ + +V A +VTE+GE+Y WG
Sbjct: 318 NGNS-GKLGLKVNIDIDHPKRVESLEDVAVRSVACSDHQTCAVTESGELYLWG 369
Score = 71 (30.1 bits), Expect = 8.4e-19, Sum P(2) = 8.4e-19
Identities = 21/69 (30%), Positives = 34/69 (49%)
Query: 65 ATSESGKLITWG----SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVT 120
A +ESG+L WG + + G +LT K + L +V+ A G H VT
Sbjct: 358 AVTESGELYLWGIDGGTIEQSGSQFLTR-KISDV-----LGGSLTVLSVACGAWHTAIVT 411
Query: 121 EAGEVYTWG 129
+G+++T+G
Sbjct: 412 SSGQLFTYG 420
Score = 59 (25.8 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 31/124 (25%), Positives = 51/124 (41%)
Query: 22 VYMWGYLPGTSPEK-SPILSPIPARLCGGD-SWKDVCGGGCGFALATSESGKLITWGSAD 79
+Y+WG GT + S L+ + + GG + V G A+ TS SG+L T+GS
Sbjct: 365 LYLWGIDGGTIEQSGSQFLTRKISDVLGGSLTVLSVACGAWHTAIVTS-SGQLFTYGSGT 423
Query: 80 DEGQSYLTSGKHGETPEPFPLPT--EASVVKAAAGWAHCVSVTEA------------GEV 125
L G +P + + V+ + G H ++ E G++
Sbjct: 424 F---GVLGHGSLESVTKPKEVESLRRMKVISVSCGPWHTAAIVETANDRKFYNAKSCGKL 480
Query: 126 YTWG 129
+TWG
Sbjct: 481 FTWG 484
Score = 44 (20.5 bits), Expect = 5.4e-16, Sum P(2) = 5.4e-16
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 60 CGFALATSESGKLITWGSADDEGQSYLTS 88
C F L+ E K + W S ++E Q L+S
Sbjct: 41 CPFKLSMDE--KYLIWYSGEEERQLRLSS 67
>RGD|1306366 [details] [associations]
symbol:Herc1 "HECT and RLD domain containing E3 ubiquitin
protein ligase family member 1" species:10116 "Rattus norvegicus"
[GO:0010507 "negative regulation of autophagy" evidence=ISO]
[GO:0021702 "cerebellar Purkinje cell differentiation"
evidence=ISO] [GO:0031175 "neuron projection development"
evidence=ISO] [GO:0050885 "neuromuscular process controlling
balance" evidence=ISO] RGD:1306366 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 OrthoDB:EOG40GCPW
GeneTree:ENSGT00700000104312 IPI:IPI00765979
Ensembl:ENSRNOT00000049300 UCSC:RGD:1306366 Uniprot:D3Z9N9
Length = 1203
Score = 254 (94.5 bits), Expect = 8.2e-18, Sum P(2) = 8.2e-18
Identities = 62/178 (34%), Positives = 97/178 (54%)
Query: 289 SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQI 346
S + I G + V++ G++ G G YG+ G G +N+Q L+ I+
Sbjct: 403 SDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSS 462
Query: 347 AAGL-WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGAR 405
+ G HT+ + EG V+ +G +G+LG G + PKL++ P L+ K VS G R
Sbjct: 463 SKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGP-LQGKVVVCVSAGYR 521
Query: 406 HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAE 463
HSA +TEDG++ +WG +G+LG GDS RNIP+LV + ++CG HT+ L++
Sbjct: 522 HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGE-VSCGSSHTIALSK 578
Score = 206 (77.6 bits), Expect = 3.6e-19, Sum P(2) = 3.6e-19
Identities = 56/175 (32%), Positives = 88/175 (50%)
Query: 289 SYVKEIACGGRHS-AVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA 347
S V E++CG H+ A+ D + +FG G G+ GHG TN +P +L + + ++
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVC 620
Query: 348 AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV-PKLLETPILESKRAKVVSCGARH 406
AG ++ ++ G+VY +G LG G +A + PKL+E L + R +S G H
Sbjct: 621 AGSQSSLALTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEE--LAATRIVDISIGDSH 676
Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDR-NIPSLVP-IHGFLPRNIACGWWHTL 459
L+ D +V +WG N GQ G G+S P V + G + I+ G H+L
Sbjct: 677 CLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731
Score = 171 (65.3 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 47/168 (27%), Positives = 78/168 (46%)
Query: 303 VVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRV 362
+V++ + +G Q G+ L+P A S D Q I AG + T IS +G V
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT--IEAGQYCTFVISTDGSV 424
Query: 363 YVFGGNQFGQLGTGVDQAEN-VPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
G +G+LG G ++ + KL P K+ H+ T +G+V SWG
Sbjct: 425 RACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGD 484
Query: 422 NKYGQLGLGDSIDRNIPSLV--PIHGFLPRNIACGWWHTLLLAETTQI 467
YG+LG G+S + P L+ P+ G + ++ G+ H+ + E ++
Sbjct: 485 GDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGEL 532
Score = 106 (42.4 bits), Expect = 3.6e-19, Sum P(2) = 3.6e-19
Identities = 25/73 (34%), Positives = 37/73 (50%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA-AAGWAHC 116
G G LA + G++ +WG D + S + P+ P + VV +AG+ H
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQ-KYPKLIQGPLQGKVVVCVSAGYRHS 523
Query: 117 VSVTEAGEVYTWG 129
+VTE GE+YTWG
Sbjct: 524 AAVTEDGELYTWG 536
Score = 40 (19.1 bits), Expect = 8.2e-18, Sum P(2) = 8.2e-18
Identities = 7/11 (63%), Positives = 8/11 (72%)
Query: 119 VTEAGEVYTWG 129
V+E EVY WG
Sbjct: 368 VSETCEVYVWG 378
>UNIPROTKB|F1NBC5 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 EMBL:AADN02016126 EMBL:AADN02016127
EMBL:AADN02016128 EMBL:AADN02016129 IPI:IPI00572483
Ensembl:ENSGALT00000016878 ArrayExpress:F1NBC5 Uniprot:F1NBC5
Length = 1050
Score = 260 (96.6 bits), Expect = 2.2e-18, Sum P(2) = 2.2e-18
Identities = 62/175 (35%), Positives = 88/175 (50%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
VKE+ACGG HS + + G + T G GQ GH S +P +L + +A G
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHESEGS--KPEPIGALAGQHIVHVACGE 93
Query: 351 WHTVCISVEGRVYVFGGNQFGQLG-TGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
H+V +S +G+V+ +G GQLG T ++ A VP+L++ L + +SCG H
Sbjct: 94 SHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKK--LNQQTILQISCGNWHCLA 151
Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNI-PSLVP-IHGFLPRNIACGWWHTLLLA 462
L DGQ +WG N YGQLGLG P V + G +A G H+ L+
Sbjct: 152 LAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALS 206
Score = 240 (89.5 bits), Expect = 3.8e-19, Sum P(2) = 3.8e-19
Identities = 58/182 (31%), Positives = 94/182 (51%)
Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR-PSYASSLMDIQVE 344
AG+ ++ +ACG HS ++D G + ++G G GQ G + D + P L +
Sbjct: 82 AGQ-HIVHVACGESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTIL 140
Query: 345 QIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD-QAENVPKLLETPILESKRAKVVSCG 403
QI+ G WH + ++ +G+ + +G N +GQLG G + ++ P+ +++ L+ V+ G
Sbjct: 141 QISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKS--LDGIPLAQVAAG 198
Query: 404 ARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI-HGFLPRNIACGWWHTLLLA 462
HS L+ G V WG N GQLGL D DR P V + I+CG HT +L
Sbjct: 199 GAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLT 258
Query: 463 ET 464
++
Sbjct: 259 KS 260
Score = 240 (89.5 bits), Expect = 3.9e-19, Sum P(3) = 3.9e-19
Identities = 62/178 (34%), Positives = 89/178 (50%)
Query: 285 KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST-NDQLRPSYASSLMDIQV 343
K + + +I+CG H + G T+G YGQ G G Q P SL I +
Sbjct: 133 KLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPL 192
Query: 344 EQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCG 403
Q+AAG H+ +S+ G V+ +G N GQLG ++ P +L S++ +SCG
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESP--CHVKLLRSQKVVYISCG 250
Query: 404 ARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI-PSLV-PIHGFLPRNIACGWWHTL 459
H+AVLT+ G V ++G GQLG DS++ + P V + G IACG HTL
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLG-HDSMNDEVNPRRVLELMGSEVSQIACGRHHTL 307
Score = 192 (72.6 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 54/161 (33%), Positives = 78/161 (48%)
Query: 310 LLTFGWGLYGQCGHGSTNDQL--RPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG 367
+L +G+ +GQ G GS + P + D V+++A G H+V + +G VY G
Sbjct: 1 MLCWGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGL 60
Query: 368 NQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
N GQLG + ++ P L + V+CG HS L++ GQV SWG GQL
Sbjct: 61 NTKGQLGHESEGSKPEP----IGALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQL 116
Query: 428 GLGDSIDR-NIPSLVP-IHGFLPRNIACGWWHTLLLAETTQ 466
GL D +P L+ ++ I+CG WH L LA Q
Sbjct: 117 GLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQ 157
Score = 191 (72.3 bits), Expect = 5.5e-19, Sum P(2) = 5.5e-19
Identities = 39/84 (46%), Positives = 50/84 (59%)
Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
I+CG H+AV+T +G + TFG G GQ GH S ND++ P LM +V QIA G HT
Sbjct: 247 ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHT 306
Query: 354 VC-ISVEGRVYVFGGNQFGQLGTG 376
+ + G +Y FG GQLGTG
Sbjct: 307 LAFVPSSGMIYAFGCGTRGQLGTG 330
Score = 127 (49.8 bits), Expect = 0.00018, P = 0.00018
Identities = 32/103 (31%), Positives = 52/103 (50%)
Query: 365 FGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKY 424
+G + FGQ G G + +P+ + + K V+CG HS L EDG+V + G N
Sbjct: 4 WGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 425 GQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
GQLG + P + + G ++ACG H++ L++ Q+
Sbjct: 64 GQLGHESEGSKPEP-IGALAGQHIVHVACGESHSVALSDQGQV 105
Score = 119 (46.9 bits), Expect = 5.5e-19, Sum P(2) = 5.5e-19
Identities = 49/204 (24%), Positives = 82/204 (40%)
Query: 26 GYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSY 85
G L S P PI A L G CG AL S+ G++ +WG+ D GQ
Sbjct: 64 GQLGHESEGSKP--EPIGA-LAGQHIVHVACGESHSVAL--SDQGQVFSWGAGSD-GQLG 117
Query: 86 LTSGKHGET-PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFG 144
LT+ + T P + ++++ + G HC+++ G+ +TWG + + ++
Sbjct: 118 LTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWG-QNSYGQLGLGKECP 176
Query: 145 SAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPC 204
S S Q+ + +P Q + + + S DE SPC
Sbjct: 177 SQASPQRVKS--LDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPC 234
Query: 205 LVTLNPGVKITKVAAGGRHTLILS 228
V L K+ ++ G HT +L+
Sbjct: 235 HVKLLRSQKVVYISCGEEHTAVLT 258
Score = 93 (37.8 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 32/109 (29%), Positives = 46/109 (42%)
Query: 25 WGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQS 84
+G L G E SP + G V GG + A S SG + WG + GQ
Sbjct: 166 YGQL-GLGKECPSQASPQRVKSLDGIPLAQVAAGGA-HSFALSLSGAVFGWGK-NSSGQL 222
Query: 85 YLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
L+ + E+P L VV + G H +T++G V+T+G C
Sbjct: 223 GLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSC 271
Score = 81 (33.6 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 20/46 (43%), Positives = 25/46 (54%)
Query: 289 SYVKEIACGGRHS-AVVTDAGALLTFGWGLYGQCGHGSTNDQLRPS 333
S V +IACG H+ A V +G + FG G GQ G G T + PS
Sbjct: 294 SEVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNVKCPS 339
Score = 67 (28.6 bits), Expect = 3.8e-19, Sum P(2) = 3.8e-19
Identities = 20/60 (33%), Positives = 29/60 (48%)
Query: 72 LITWGSADDEGQSYLTSGKHGETPEP--FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
++ WG + GQ + S PEP + + +V + A G H V + E GEVYT G
Sbjct: 1 MLCWGYSSF-GQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCG 59
Score = 40 (19.1 bits), Expect = 3.9e-19, Sum P(3) = 3.9e-19
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 211 GVKITKVAAGGRHTLILSD 229
G I VA G H++ LSD
Sbjct: 83 GQHIVHVACGESHSVALSD 101
Score = 37 (18.1 bits), Expect = 2.2e-18, Sum P(2) = 2.2e-18
Identities = 6/14 (42%), Positives = 10/14 (71%)
Query: 214 ITKVAAGGRHTLIL 227
+ +VA GG H++ L
Sbjct: 36 VKEVACGGNHSVFL 49
>UNIPROTKB|F1RNC5 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
InterPro:IPR000719 InterPro:IPR002290 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GeneTree:ENSGT00700000104137
EMBL:FP016171 Ensembl:ENSSSCT00000019338 OMA:EPASHQQ Uniprot:F1RNC5
Length = 700
Score = 249 (92.7 bits), Expect = 5.3e-19, Sum P(2) = 5.3e-19
Identities = 52/146 (35%), Positives = 85/146 (58%)
Query: 284 GKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQV 343
G++G + +K +ACG +A +TD G ++TFG G G GHGS ND +P+ +L+ ++
Sbjct: 395 GQSGVT-IKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQPTIVEALLGYEM 453
Query: 344 EQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCG 403
Q+A G H + +S E ++ +G G+LG G ++ P+L+ P + A+ V CG
Sbjct: 454 VQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESHCCPQLVPMP--PGQEAQRVVCG 511
Query: 404 ARHSAVLTEDGQVLSWGWNKYGQLGL 429
S +LT GQ L+ G N++ +LGL
Sbjct: 512 IDSSMILTVPGQALACGSNRFNKLGL 537
Score = 159 (61.0 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 48/179 (26%), Positives = 84/179 (46%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHG---STNDQLRPSYASSLMD----IQV 343
V ++A G A VT +G L+ + G G +Q +P + S ++ + +
Sbjct: 342 VVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGALLPGAIEQPQPQFVSRFLEGQSGVTI 401
Query: 344 EQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCG 403
+ +A G T C++ G + FG G LG G + P ++E +L + +V +CG
Sbjct: 402 KHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQPTIVEA-LLGYEMVQV-ACG 459
Query: 404 ARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIH-GFLPRNIACGWWHTLLL 461
A H L+ + ++ +WG G+LGLG P LVP+ G + + CG +++L
Sbjct: 460 ASHVLALSTERELFAWGRGDGGRLGLGTRESHCCPQLVPMPPGQEAQRVVCGIDSSMIL 518
Score = 148 (57.2 bits), Expect = 4.3e-09, Sum P(3) = 4.3e-09
Identities = 34/112 (30%), Positives = 56/112 (50%)
Query: 352 HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLT 411
H++ ++ G Y FG NQ GQLGT + P ++ L+ + V+CG + +
Sbjct: 580 HSLLLTASGDCYTFGSNQHGQLGTNARRVSRAPCRVQG--LQGIKISTVACGDAFTVAIG 637
Query: 412 EDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI---HGFLPRNIACGWWHTLL 460
+G+V SWG G+LG D D +P V + H + +++C +TLL
Sbjct: 638 AEGEVFSWGKGARGRLGRKDE-DAGLPRPVQLDETHPYTVTSVSCCHGNTLL 688
Score = 141 (54.7 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 44/175 (25%), Positives = 77/175 (44%)
Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWH 352
++ACG H ++ L +G G G+ G G+ P + +++ G+
Sbjct: 455 QVACGASHVLALSTERELFAWGRGDGGRLGLGTRESHCCPQLVPMPPGQEAQRVVCGIDS 514
Query: 353 TVCISVEGRVYVFGGNQFGQLGT-----GVDQA--ENVPKLLE-TPI----LESKRAKVV 400
++ ++V G+ G N+F +LG G + A + V + + TP+ L+ + V
Sbjct: 515 SMILTVPGQALACGSNRFNKLGLDPLSLGEEPAPHQQVEEAVTFTPLGSAPLDQEPLLSV 574
Query: 401 SCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACG 454
G HS +LT G ++G N++GQLG P V + G +ACG
Sbjct: 575 DLGPAHSLLLTASGDCYTFGSNQHGQLGTNARRVSRAPCRVQGLQGIKISTVACG 629
Score = 117 (46.2 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 31/106 (29%), Positives = 47/106 (44%)
Query: 297 GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCI 356
G HS ++T +G TFG +GQ G + P L I++ +A G TV I
Sbjct: 577 GPAHSLLLTASGDCYTFGSNQHGQLGTNARRVSRAPCRVQGLQGIKISTVACGDAFTVAI 636
Query: 357 SVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSC 402
EG V+ +G G+LG D+ +P+ ++ VSC
Sbjct: 637 GAEGEVFSWGKGARGRLGRK-DEDAGLPRPVQLDETHPYTVTSVSC 681
Score = 67 (28.6 bits), Expect = 4.3e-09, Sum P(3) = 4.3e-09
Identities = 24/106 (22%), Positives = 45/106 (42%)
Query: 28 LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSY 85
LPG + P +R G S + CG F ++ G ++T+GS +
Sbjct: 377 LPGAIEQPQP---QFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSN---GC 430
Query: 86 LTSGKHGETPEPFPLPTEAS--VVKAAAGWAHCVSVTEAGEVYTWG 129
L G + +P + +V+ A G +H ++++ E++ WG
Sbjct: 431 LGHGSLNDISQPTIVEALLGYEMVQVACGASHVLALSTERELFAWG 476
Score = 56 (24.8 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 20/84 (23%), Positives = 33/84 (39%)
Query: 46 LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS 105
L G + + CG AL+T +L WG D G+ L + + P+ P+P
Sbjct: 448 LLGYEMVQVACGASHVLALSTER--ELFAWGRGDG-GRLGLGTRESHCCPQLVPMPPGQE 504
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWG 129
+ G + +T G+ G
Sbjct: 505 AQRVVCGIDSSMILTVPGQALACG 528
Score = 50 (22.7 bits), Expect = 5.3e-19, Sum P(2) = 5.3e-19
Identities = 13/38 (34%), Positives = 16/38 (42%)
Query: 92 GETPEPFPLPT-EASVVKAAAGWAHCVSVTEAGEVYTW 128
G P LP VV+ AAG VT +G + W
Sbjct: 327 GGLSAPLRLPMLNTEVVQVAAGRTQKAGVTRSGRLILW 364
Score = 44 (20.5 bits), Expect = 5.4e-08, Sum P(3) = 5.4e-08
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILS 228
P +V G ++ +VA G H L LS
Sbjct: 442 PTIVEALLGYEMVQVACGASHVLALS 467
Score = 38 (18.4 bits), Expect = 4.3e-09, Sum P(3) = 4.3e-09
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILS 228
P LV + PG + +V G ++IL+
Sbjct: 494 PQLVPMPPGQEAQRVVCGIDSSMILT 519
>ZFIN|ZDB-GENE-090311-16 [details] [associations]
symbol:si:ch211-281g13.4 "si:ch211-281g13.4"
species:7955 "Danio rerio" [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-090311-16 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
eggNOG:COG5021 HOGENOM:HOG000208452 HOVERGEN:HBG050878
GeneTree:ENSGT00700000104312 EMBL:BX321880 IPI:IPI00923765
RefSeq:NP_001139174.1 UniGene:Dr.150552 Ensembl:ENSDART00000138510
GeneID:794323 NextBio:20931808 Uniprot:B8A4S5
Length = 985
Score = 257 (95.5 bits), Expect = 7.2e-19, P = 7.2e-19
Identities = 62/177 (35%), Positives = 94/177 (53%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAG 349
V +IACG +HS +++ G L +G +GQ G ++ P + SL I V QI+AG
Sbjct: 120 VIQIACGDQHSVALSNDGQLFVWGENAHGQLGLRKEQALIQSPQHLQSLCGIPVAQISAG 179
Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
H+ +S+ G V+ +G N GQLG G VP ++++ L K+ +SCG H+A
Sbjct: 180 GNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFVPTIVKS--LSGKKTVSISCGGEHTAT 237
Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETT 465
L++ G V ++G +GQLG D + P LV + G + CG HTL+L T
Sbjct: 238 LSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLVAELWGSKVSQVTCGRHHTLVLVALT 294
Score = 225 (84.3 bits), Expect = 6.2e-16, Sum P(2) = 6.2e-16
Identities = 57/166 (34%), Positives = 87/166 (52%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLY--GQCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
V +I+ GG HS V++ +G + FGWG GQ G G T D+ P+ SL + I+
Sbjct: 173 VAQISAGGNHSFVLSLSGVV--FGWGSNSAGQLGLGDTTDRFVPTIVKSLSGKKTVSISC 230
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
G HT +S G V+ FG FGQLG + E+ P+L+ L + V+CG H+
Sbjct: 231 GGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLVAE--LWGSKVSQVTCGRHHTL 288
Query: 409 VLTE-DGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIAC 453
VL ++ S+G GQLG G+ + +++P +P+ LP + C
Sbjct: 289 VLVALTNRIYSFGCGMQGQLGNGEQVKQSVP--LPV--LLPTDCNC 330
Score = 221 (82.9 bits), Expect = 7.9e-15, P = 7.9e-15
Identities = 69/203 (33%), Positives = 100/203 (49%)
Query: 268 GKDRPLLVRQGSVNSSGKAG-----RSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG 322
GK L +R N GK R ++ I CG + ++ D G +L Y C
Sbjct: 53 GKVSVLRLRDEDCNQDGKLKQLDLKREKIRSIVCGEDGAVLLADGGKVLLMD--KYTVC- 109
Query: 323 HGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE- 381
RP L + +V QIA G H+V +S +G+++V+G N GQLG +QA
Sbjct: 110 --------RP--LKGLDNTKVIQIACGDQHSVALSNDGQLFVWGENAHGQLGLRKEQALI 159
Query: 382 NVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
P+ L++ L +S G HS VL+ G V WG N GQLGLGD+ DR +P++V
Sbjct: 160 QSPQHLQS--LCGIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFVPTIV 217
Query: 442 P-IHGFLPRNIACGWWHTLLLAE 463
+ G +I+CG HT L++
Sbjct: 218 KSLSGKKTVSISCGGEHTATLSK 240
Score = 52 (23.4 bits), Expect = 6.2e-16, Sum P(2) = 6.2e-16
Identities = 7/18 (38%), Positives = 14/18 (77%)
Query: 211 GVKITKVAAGGRHTLILS 228
G+ + +++AGG H+ +LS
Sbjct: 170 GIPVAQISAGGNHSFVLS 187
>UNIPROTKB|E1B827 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072372 "primary cilium" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0072372 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104137 OMA:EREVFAW EMBL:DAAA02048605
EMBL:DAAA02048606 IPI:IPI00700790 Ensembl:ENSBTAT00000020643
Uniprot:E1B827
Length = 698
Score = 247 (92.0 bits), Expect = 9.1e-19, Sum P(2) = 9.1e-19
Identities = 50/146 (34%), Positives = 85/146 (58%)
Query: 284 GKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQV 343
G++G + +K +ACG +A +TD G ++TFG G G GHG ND +P+ +L+ ++
Sbjct: 393 GQSGVT-IKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGGLNDISQPTIVEALLGYEM 451
Query: 344 EQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCG 403
Q+A G H + +S E ++ +G G+LG G ++ + P+ + P+ + A+ V CG
Sbjct: 452 VQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESHSCPQ--QVPMPPGQEAQRVICG 509
Query: 404 ARHSAVLTEDGQVLSWGWNKYGQLGL 429
S +LT GQ L+ G N++ +LGL
Sbjct: 510 IDSSVILTVPGQALACGSNRFNKLGL 535
Score = 155 (59.6 bits), Expect = 9.2e-08, P = 9.2e-08
Identities = 46/172 (26%), Positives = 80/172 (46%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHG---STNDQLRPSYASSLMD----IQV 343
V ++A G A VT +G L+ + G G +Q +P + S ++ + +
Sbjct: 340 VVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGALLPGAVEQQQPQFVSRFLEGQSGVTI 399
Query: 344 EQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCG 403
+ +A G T C++ G + FG G LG G + P ++E +L + +V +CG
Sbjct: 400 KHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGGLNDISQPTIVEA-LLGYEMVQV-ACG 457
Query: 404 ARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIH-GFLPRNIACG 454
A H L+ + ++ +WG G+LGLG + P VP+ G + + CG
Sbjct: 458 ASHVLALSTERELFAWGRGDGGRLGLGTRESHSCPQQVPMPPGQEAQRVICG 509
Score = 146 (56.5 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 46/175 (26%), Positives = 77/175 (44%)
Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWH 352
++ACG H ++ L +G G G+ G G+ P + +++ G+
Sbjct: 453 QVACGASHVLALSTERELFAWGRGDGGRLGLGTRESHSCPQQVPMPPGQEAQRVICGIDS 512
Query: 353 TVCISVEGRVYVFGGNQFGQLGT-----GVDQA--ENVPKLLE-TPI----LESKRAKVV 400
+V ++V G+ G N+F +LG G + A + V + L TP+ L+ + V
Sbjct: 513 SVILTVPGQALACGSNRFNKLGLDHLSLGEEPALHQQVEEALNFTPLGSAPLDQEPLLSV 572
Query: 401 SCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACG 454
G HSA +T G ++G N++GQLG P V + G +ACG
Sbjct: 573 DLGTAHSAAVTASGDCYTFGSNQHGQLGTNARRVSRAPCQVQGLQGIKIAMVACG 627
Score = 145 (56.1 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
Identities = 47/186 (25%), Positives = 79/186 (42%)
Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQCG------------HGSTNDQLR--PSYASS 337
+ + CG S ++T G L G + + G H + L P ++
Sbjct: 504 QRVICGIDSSVILTVPGQALACGSNRFNKLGLDHLSLGEEPALHQQVEEALNFTPLGSAP 563
Query: 338 LMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRA 397
L + + G H+ ++ G Y FG NQ GQLGT + P ++ L+ +
Sbjct: 564 LDQEPLLSVDLGTAHSAAVTASGDCYTFGSNQHGQLGTNARRVSRAPCQVQG--LQGIKI 621
Query: 398 KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLP---RNIACG 454
+V+CG + + +G+V SWG G+LG D D +P V + P +++C
Sbjct: 622 AMVACGDAFTVAIGAEGEVYSWGKGARGRLGRRDE-DAALPRPVQLDETQPYTVTSVSCC 680
Query: 455 WWHTLL 460
+TLL
Sbjct: 681 HGNTLL 686
Score = 132 (51.5 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 43/147 (29%), Positives = 68/147 (46%)
Query: 262 LEHAASGKDRPLLVRQ--GSVNSS--GKA--GRSYVKEIACGGRHSAVVTDAGALLTFGW 315
L+H + G++ P L +Q ++N + G A + + + G HSA VT +G TFG
Sbjct: 535 LDHLSLGEE-PALHQQVEEALNFTPLGSAPLDQEPLLSVDLGTAHSAAVTASGDCYTFGS 593
Query: 316 GLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGT 375
+GQ G + P L I++ +A G TV I EG VY +G G+LG
Sbjct: 594 NQHGQLGTNARRVSRAPCQVQGLQGIKIAMVACGDAFTVAIGAEGEVYSWGKGARGRLGR 653
Query: 376 GVDQAENVPKLLETPILESKRAKVVSC 402
D+ +P+ ++ + VSC
Sbjct: 654 R-DEDAALPRPVQLDETQPYTVTSVSC 679
Score = 67 (28.6 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 24/106 (22%), Positives = 46/106 (43%)
Query: 28 LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSY 85
LPG ++ P +R G S + CG F ++ G ++T+GS +
Sbjct: 375 LPGAVEQQQP---QFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSN---GC 428
Query: 86 LTSGKHGETPEPFPLPTEAS--VVKAAAGWAHCVSVTEAGEVYTWG 129
L G + +P + +V+ A G +H ++++ E++ WG
Sbjct: 429 LGHGGLNDISQPTIVEALLGYEMVQVACGASHVLALSTERELFAWG 474
Score = 64 (27.6 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 21/84 (25%), Positives = 33/84 (39%)
Query: 46 LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS 105
L G + + CG AL+T +L WG D G+ L + + P+ P+P
Sbjct: 446 LLGYEMVQVACGASHVLALSTER--ELFAWGRGDG-GRLGLGTRESHSCPQQVPMPPGQE 502
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWG 129
+ G V +T G+ G
Sbjct: 503 AQRVICGIDSSVILTVPGQALACG 526
Score = 50 (22.7 bits), Expect = 9.1e-19, Sum P(2) = 9.1e-19
Identities = 13/38 (34%), Positives = 16/38 (42%)
Query: 92 GETPEPFPLPT-EASVVKAAAGWAHCVSVTEAGEVYTW 128
G P LP VV+ AAG VT +G + W
Sbjct: 325 GGLSAPLRLPMLNTEVVQVAAGRTQKAGVTRSGRLILW 362
Score = 44 (20.5 bits), Expect = 8.9e-08, Sum P(3) = 8.9e-08
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILS 228
P +V G ++ +VA G H L LS
Sbjct: 440 PTIVEALLGYEMVQVACGASHVLALS 465
>DICTYBASE|DDB_G0269934 [details] [associations]
symbol:DDB_G0269934 "Ras GTPase activation
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0051056 "regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0043547 "positive regulation of
GTPase activity" evidence=IEA] [GO:0035023 "regulation of Rho
protein signal transduction" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005096 "GTPase activator activity" evidence=IEA]
[GO:0005089 "Rho guanyl-nucleotide exchange factor activity"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001936
InterPro:IPR008936 Pfam:PF00616 Pfam:PF00621 PROSITE:PS50010
PROSITE:PS50018 SMART:SM00323 dictyBase:DDB_G0269934
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0007165 EMBL:AAFI02000005
GO:GO:0005096 GO:GO:0043547 SUPFAM:SSF48350 GO:GO:0005622
GO:GO:0005089 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 Gene3D:1.10.506.10 eggNOG:COG5261
RefSeq:XP_646416.1 ProteinModelPortal:Q55CR5
EnsemblProtists:DDB0233497 GeneID:8617373 KEGG:ddi:DDB_G0269934
InParanoid:Q55CR5 OMA:SHTEYEN Uniprot:Q55CR5
Length = 2044
Score = 248 (92.4 bits), Expect = 3.7e-17, Sum P(2) = 3.7e-17
Identities = 59/176 (33%), Positives = 92/176 (52%)
Query: 289 SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
S V ++ G H A V G LLT+G G GQ GHG TN+Q+ P SL + Q+
Sbjct: 804 SDVVSVSIGFCHGAAVRANGELLTWGVGENGQLGHGDTNNQIEPKIIQSLTSFWITQVQC 863
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
G HT+C++ G+VY +G +++GQLG G + P ++ LE ++ G+ H A
Sbjct: 864 GEKHTICLTKNGKVYSWGASEYGQLGLGDVTQHSSP--MQVSALEKYNVLQIASGSTHCA 921
Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN-IACGWWHTLLLAE 463
VLT +VL +G +G + ++P+LVP +L + + CG + T + E
Sbjct: 922 VLTTSKEVLVFG--NGAAMGAASVV--SLPTLVPSLKYLHIDRLCCGHYSTAAITE 973
Score = 211 (79.3 bits), Expect = 9.3e-19, Sum P(2) = 9.3e-19
Identities = 58/179 (32%), Positives = 97/179 (54%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
V +IA G H AV+T + +L FG G G+ + P+ SL + ++++ G
Sbjct: 910 VLQIASGSTHCAVLTTSKEVLVFGNG----AAMGAASVVSLPTLVPSLKYLHIDRLCCGH 965
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
+ T I+ G VY +G Q +LG G + E PKL+E L ++ + +SCG RH+A L
Sbjct: 966 YSTAAITECGDVYTWGTGQ--ELGHGGNSTETSPKLIEA--LRNQSIRQISCGGRHTAFL 1021
Query: 411 TEDGQVLSWGWNKYGQLGL--GD-SIDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQ 466
T+ G++ + G + +GQLG GD + + I SL F+ +++CG + + L +TT+
Sbjct: 1022 TDSGRIFTCGKDSFGQLGQMSGDQNKPKRIESLTKTT-FI--SVSCGENYNVALFDTTR 1077
Score = 193 (73.0 bits), Expect = 4.4e-15, Sum P(2) = 4.4e-15
Identities = 51/179 (28%), Positives = 82/179 (45%)
Query: 290 YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAG 349
++ ++ CG +H+ +T G + ++G YGQ G G P S+L V QIA+G
Sbjct: 857 WITQVQCGEKHTICLTKNGKVYSWGASEYGQLGLGDVTQHSSPMQVSALEKYNVLQIASG 916
Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
H ++ V VFG G ++P L+ P L+ + CG +A
Sbjct: 917 STHCAVLTTSKEVLVFGNGA----AMGAASVVSLPTLV--PSLKYLHIDRLCCGHYSTAA 970
Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
+TE G V +WG + +LG G + P L+ + R I+CG HT L ++ +I
Sbjct: 971 ITECGDVYTWGTGQ--ELGHGGNSTETSPKLIEALRNQSIRQISCGGRHTAFLTDSGRI 1027
Score = 161 (61.7 bits), Expect = 3.3e-13, Sum P(2) = 3.3e-13
Identities = 36/121 (29%), Positives = 61/121 (50%)
Query: 290 YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAG 349
++ + CG +A +T+ G + T WG + GHG + + P +L + + QI+ G
Sbjct: 957 HIDRLCCGHYSTAAITECGDVYT--WGTGQELGHGGNSTETSPKLIEALRNQSIRQISCG 1014
Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
HT ++ GR++ G + FGQLG + +N PK +E+ L VSCG ++
Sbjct: 1015 GRHTAFLTDSGRIFTCGKDSFGQLGQ-MSGDQNKPKRIES--LTKTTFISVSCGENYNVA 1071
Query: 410 L 410
L
Sbjct: 1072 L 1072
Score = 141 (54.7 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 53/199 (26%), Positives = 95/199 (47%)
Query: 281 NSSGKAGRSYVKEIACGGRHSAVVTDAG-ALLTFGWGLYGQCGHG---STNDQLRPSYAS 336
+SS G+S ++ SA+ D L+T WG C G + DQ +P+
Sbjct: 687 SSSPPNGQS--PSLSSTAHRSAIHLDTSRGLMT--WGSASNCKLGFKVTAKDQSQPT-PE 741
Query: 337 SLMDIQVEQI---AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET--PI 391
L + + I ++G +++ ++ G VY++G G + T +P++ + P
Sbjct: 742 RLPNFNIPDICSISSGSYYSSVLTENGDVYLWGR---GAVKTPAVPILGIPQIEDQLLPF 798
Query: 392 -LESKRAKV-VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLP 448
LES V VS G H A + +G++L+WG + GQLG GD+ ++ P ++ + F
Sbjct: 799 KLESLSDVVSVSIGFCHGAAVRANGELLTWGVGENGQLGHGDTNNQIEPKIIQSLTSFWI 858
Query: 449 RNIACGWWHTLLLAETTQI 467
+ CG HT+ L + ++
Sbjct: 859 TQVQCGEKHTICLTKNGKV 877
Score = 102 (41.0 bits), Expect = 9.3e-19, Sum P(2) = 9.3e-19
Identities = 38/122 (31%), Positives = 57/122 (46%)
Query: 22 VYMWGYLPGTSPEKSPILS-P------IPARLCGGDSWKDVCGGGCGFA--LATSESGKL 72
VY+WG +P PIL P +P +L +S DV GF A +G+L
Sbjct: 770 VYLWGRGAVKTPAV-PILGIPQIEDQLLPFKL---ESLSDVVSVSIGFCHGAAVRANGEL 825
Query: 73 ITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS--VVKAAAGWAHCVSVTEAGEVYTWGW 130
+TWG ++ GQ L G EP + + S + + G H + +T+ G+VY+WG
Sbjct: 826 LTWGVGEN-GQ--LGHGDTNNQIEPKIIQSLTSFWITQVQCGEKHTICLTKNGKVYSWGA 882
Query: 131 RE 132
E
Sbjct: 883 SE 884
Score = 86 (35.3 bits), Expect = 4.3e-17, Sum P(2) = 4.3e-17
Identities = 40/172 (23%), Positives = 68/172 (39%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVT 120
A+ S L+TWGSA + + + K P P LP + ++G + +T
Sbjct: 706 AIHLDTSRGLMTWGSASNCKLGFKVTAKDQSQPTPERLPNFNIPDICSISSGSYYSSVLT 765
Query: 121 EAGEVYTWGW----RECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
E G+VY WG VP + + F+ +S ++ + RA E+
Sbjct: 766 ENGDVYLWGRGAVKTPAVPILGIPQIEDQLLPFKLESLSDVVSVSIGFCHGAAVRANGEL 825
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ T E + GD + P ++ IT+V G +HT+ L+
Sbjct: 826 L----TWGVGENGQL-GHGDTNNQIEPKIIQSLTSFWITQVQCGEKHTICLT 872
Score = 82 (33.9 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 25/93 (26%), Positives = 42/93 (45%)
Query: 41 PIPARLCGGDSWKDVCG--GGCGFALATSESGKLITWGSADDEGQSYLTSG--KHGETPE 96
P P RL + D+C G ++ +E+G + WG + + G + +
Sbjct: 738 PTPERLPNFNI-PDICSISSGSYYSSVLTENGDVYLWGRGAVKTPAVPILGIPQIEDQLL 796
Query: 97 PFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
PF L + + VV + G+ H +V GE+ TWG
Sbjct: 797 PFKLESLSDVVSVSIGFCHGAAVRANGELLTWG 829
Score = 79 (32.9 bits), Expect = 7.9e-11, Sum P(2) = 7.9e-11
Identities = 22/82 (26%), Positives = 40/82 (48%)
Query: 60 CG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
CG + +++GK+ +WG A + GQ L +P + +V++ A+G HC
Sbjct: 863 CGEKHTICLTKNGKVYSWG-ASEYGQLGLGDVTQHSSPMQVSALEKYNVLQIASGSTHCA 921
Query: 118 SVTEAGEVYTWGWRECVPSAKV 139
+T + EV +G + +A V
Sbjct: 922 VLTTSKEVLVFGNGAAMGAASV 943
Score = 46 (21.3 bits), Expect = 3.7e-17, Sum P(2) = 3.7e-17
Identities = 28/113 (24%), Positives = 44/113 (38%)
Query: 29 PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTS 88
P +S +PI SP P+ S ++ C A++ S L AD+ G S T+
Sbjct: 634 PSSSSSSTPISSPPPSL----SSSSNIAISSCS---ASNLSNVL-----ADNSGSSTGTT 681
Query: 89 GKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE-CVPSAKVT 140
G + P P S ++ + + + + TWG C KVT
Sbjct: 682 PTDGFSSSP---PNGQSPSLSSTAHRSAIHLDTSRGLMTWGSASNCKLGFKVT 731
>TAIR|locus:2092190 [details] [associations]
symbol:AT3G26100 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002686
EMBL:AB023041 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 HSSP:P18754
EMBL:AK230272 IPI:IPI00540426 RefSeq:NP_974362.1 UniGene:At.25510
UniGene:At.69016 ProteinModelPortal:Q9LU80 SMR:Q9LU80 STRING:Q9LU80
PRIDE:Q9LU80 EnsemblPlants:AT3G26100.2 GeneID:822208
KEGG:ath:AT3G26100 TAIR:At3g26100 HOGENOM:HOG000070923
InParanoid:Q9LU80 OMA:LACQPNG PhylomeDB:Q9LU80
ProtClustDB:CLSN2688790 Genevestigator:Q9LU80 Uniprot:Q9LU80
Length = 532
Score = 223 (83.6 bits), Expect = 1.0e-18, Sum P(3) = 1.0e-18
Identities = 54/179 (30%), Positives = 97/179 (54%)
Query: 290 YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPS-YASSLMDIQVEQIAA 348
+V + A G +AV++ G + TF WG G+ GH + + P L ++ V QIAA
Sbjct: 250 FVVQAAIGNYFTAVLSREGKVYTFSWGNDGRLGHQTEAADVEPRPLLGPLENVPVVQIAA 309
Query: 349 GLWHTVCISVEGR---VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGAR 405
G + + ++ + VY G G+LG G E P+++E + + + +VV+ GA
Sbjct: 310 GYCYLLALACQPNGMSVYSVGCGLGGKLGHGSRTDEKYPRVIEQFQILNLQPRVVAAGAW 369
Query: 406 HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
H+AV+ +DG+V +WGW +YG LG G+ ++P +V + ++A G + T ++++
Sbjct: 370 HAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVEGLSHVKAVHVATGDYTTFVVSD 428
Score = 206 (77.6 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 57/174 (32%), Positives = 87/174 (50%)
Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWH 352
+ G HS VT G + TFG+ GQ GHG T D+ R SL +++ Q AAG
Sbjct: 147 QAVAGPGHSVAVTSKGEVYTFGYNNSGQLGHGHTEDEARIQPVRSLQGVRIIQAAAGAAR 206
Query: 353 TVCISVEGRVYVFGGNQFGQLGTGVDQAENV--PKLLETPILESKRAKVVSCGARHSAVL 410
T+ IS +G+VY G FG+ G + V P+L+ + L++ + G +AVL
Sbjct: 207 TMLISDDGKVYACGKESFGEAEYGGQGTKPVTTPQLVTS--LKNIFVVQAAIGNYFTAVL 264
Query: 411 TEDGQVLSWGWNKYGQLG-LGDSID-RNIPSLVPIHGFLPRNIACGWWHTLLLA 462
+ +G+V ++ W G+LG ++ D P L P+ IA G+ + L LA
Sbjct: 265 SREGKVYTFSWGNDGRLGHQTEAADVEPRPLLGPLENVPVVQIAAGYCYLLALA 318
Score = 167 (63.8 bits), Expect = 1.3e-13, Sum P(3) = 1.3e-13
Identities = 51/166 (30%), Positives = 77/166 (46%)
Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
+A G H+AVV G + T+GWG YG GHG+ + P L ++ +A G + T
Sbjct: 364 VAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVEGLSHVKAVHVATGDYTT 423
Query: 354 VCISVEGRVYVFGGNQFGQLG--TGVDQAEN--VPKLLETPILESKRA--KVVSCGAR-- 405
+S +G VY FG + LG D+ N L T + K+ ++V
Sbjct: 424 FVVSDDGDVYSFGCGESASLGHHPSFDEQGNRHANVLSPTVVTSLKQVNERMVQISLTNS 483
Query: 406 -----HSAVLTEDGQVLSWGWNKYGQLG--LG-DSIDRNIPSLVPI 443
H+ LTE G++ ++G GQLG LG + +R +P V I
Sbjct: 484 IYWNAHTFALTESGKLFAFGAGDQGQLGTELGKNQKERCVPEKVDI 529
Score = 165 (63.1 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 51/183 (27%), Positives = 83/183 (45%)
Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGS--TNDQLRPSYASSLMDIQVEQIAAGL 350
+ A G + +++D G + G +G+ +G T P +SL +I V Q A G
Sbjct: 199 QAAAGAARTMLISDDGKVYACGKESFGEAEYGGQGTKPVTTPQLVTSLKNIFVVQAAIGN 258
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
+ T +S EG+VY F G+LG + A+ P+ L P LE+ ++ G + L
Sbjct: 259 YFTAVLSREGKVYTFSWGNDGRLGHQTEAADVEPRPLLGP-LENVPVVQIAAGYCYLLAL 317
Query: 411 T--EDGQ-VLSWGWNKYGQLGLGDSIDRNIPSLVP---IHGFLPRNIACGWWHTLLLAET 464
+G V S G G+LG G D P ++ I PR +A G WH ++ +
Sbjct: 318 ACQPNGMSVYSVGCGLGGKLGHGSRTDEKYPRVIEQFQILNLQPRVVAAGAWHAAVVGQD 377
Query: 465 TQI 467
++
Sbjct: 378 GRV 380
Score = 70 (29.7 bits), Expect = 4.5e-12, Sum P(2) = 4.5e-12
Identities = 24/80 (30%), Positives = 30/80 (37%)
Query: 55 VCGGGCGF-ALATSESGKLIT---WGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+ G C ALA +G + G G T K+ E F + V AA
Sbjct: 307 IAAGYCYLLALACQPNGMSVYSVGCGLGGKLGHGSRTDEKYPRVIEQFQILNLQPRVVAA 366
Query: 111 AGWAHCVSVTEAGEVYTWGW 130
W H V + G V TWGW
Sbjct: 367 GAW-HAAVVGQDGRVCTWGW 385
Score = 67 (28.6 bits), Expect = 1.0e-18, Sum P(3) = 1.0e-18
Identities = 13/23 (56%), Positives = 17/23 (73%)
Query: 108 KAAAGWAHCVSVTEAGEVYTWGW 130
+A AG H V+VT GEVYT+G+
Sbjct: 147 QAVAGPGHSVAVTSKGEVYTFGY 169
Score = 66 (28.3 bits), Expect = 1.3e-18, Sum P(3) = 1.3e-18
Identities = 22/76 (28%), Positives = 41/76 (53%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL-PTEA----SVVKAAAGW 113
G G ++A + G++ T+G ++ GQ G HG T + + P + +++AAAG
Sbjct: 151 GPGHSVAVTSKGEVYTFGY-NNSGQL----G-HGHTEDEARIQPVRSLQGVRIIQAAAGA 204
Query: 114 AHCVSVTEAGEVYTWG 129
A + +++ G+VY G
Sbjct: 205 ARTMLISDDGKVYACG 220
Score = 60 (26.2 bits), Expect = 4.9e-11, Sum P(2) = 4.9e-11
Identities = 20/73 (27%), Positives = 29/73 (39%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSG-KHGETPEPFPLPTEASVVKAAAGWAHCV 117
G + S+ GK+ G Y G K TP+ VV+AA G
Sbjct: 203 GAARTMLISDDGKVYACGKESFGEAEYGGQGTKPVTTPQLVTSLKNIFVVQAAIGNYFTA 262
Query: 118 SVTEAGEVYTWGW 130
++ G+VYT+ W
Sbjct: 263 VLSREGKVYTFSW 275
Score = 56 (24.8 bits), Expect = 1.3e-13, Sum P(3) = 1.3e-13
Identities = 26/87 (29%), Positives = 37/87 (42%)
Query: 211 GVKITKVAAGGRHTLILSDMXXXXXXXXXXXXXXXXXSR-IKMVPTPHLIPCLEH----- 264
GV+I + AAG T+++SD + K V TP L+ L++
Sbjct: 194 GVRIIQAAAGAARTMLISDDGKVYACGKESFGEAEYGGQGTKPVTTPQLVTSLKNIFVVQ 253
Query: 265 AASGKD-RPLLVRQGSVN--SSGKAGR 288
AA G +L R+G V S G GR
Sbjct: 254 AAIGNYFTAVLSREGKVYTFSWGNDGR 280
Score = 55 (24.4 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 17/59 (28%), Positives = 27/59 (45%)
Query: 62 FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE-ASVVKAAAGWAHCVSV 119
F S GK+ T+ +D + T E P P P E VV+ AAG+ + +++
Sbjct: 260 FTAVLSREGKVYTFSWGNDGRLGHQTEAADVE-PRPLLGPLENVPVVQIAAGYCYLLAL 317
Score = 41 (19.5 bits), Expect = 1.0e-18, Sum P(3) = 1.0e-18
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 188 ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
E+E G + T +P LVT + + + A G T +LS
Sbjct: 226 EAEYGGQGTKPVT-TPQLVTSLKNIFVVQAAIGNYFTAVLS 265
>ZFIN|ZDB-GENE-090311-7 [details] [associations]
symbol:si:ch211-281g13.5 "si:ch211-281g13.5"
species:7955 "Danio rerio" [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-090311-7 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
eggNOG:COG5021 HOGENOM:HOG000208452 HOVERGEN:HBG050878
GeneTree:ENSGT00700000104312 EMBL:BX321880 IPI:IPI00899041
RefSeq:NP_001139103.1 UniGene:Dr.155114 Ensembl:ENSDART00000113315
GeneID:100148091 OMA:TLAWFPS NextBio:20791722 Uniprot:B8A4S7
Length = 992
Score = 255 (94.8 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 60/179 (33%), Positives = 98/179 (54%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAG 349
V +IACG +HS +++ G L +G +GQ G + P + SL +I V QI+AG
Sbjct: 117 VIQIACGDQHSMALSNDGQLFVWGENTHGQLGLRKEQAGTQSPQHLQSLCEIPVAQISAG 176
Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
H+ +S+ G V+ +G N GQLG G + VP ++++ L K+ +SCG H+A
Sbjct: 177 GNHSFVLSLSGVVFGWGSNSAGQLGLGDTKDRFVPTIVKS--LCGKKTVSISCGGEHTAT 234
Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
L++ G V ++G +GQLG D + P L+ + G + CG HTL+ E++++
Sbjct: 235 LSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLIAELWGSKVSQVTCGRHHTLVFEESSKL 293
Score = 224 (83.9 bits), Expect = 3.7e-15, P = 3.7e-15
Identities = 59/178 (33%), Positives = 90/178 (50%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLY--GQCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
V +I+ GG HS V++ +G + FGWG GQ G G T D+ P+ SL + I+
Sbjct: 170 VAQISAGGNHSFVLSLSGVV--FGWGSNSAGQLGLGDTKDRFVPTIVKSLCGKKTVSISC 227
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
G HT +S G V+ FG FGQLG + E+ P+L+ L + V+CG H+
Sbjct: 228 GGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLIAE--LWGSKVSQVTCGRHHTL 285
Query: 409 VLTEDGQVL-SWGWNKYGQLGLGDSIDRNIPS--LVPIH--GFLPRNIACGWWHTLLL 461
V E +++ S+G GQLG G+ + +++P L+P F + G H+ L
Sbjct: 286 VFEESSKLIYSFGCGMQGQLGNGEQVKQSVPLPVLLPTECTEFTMEKLITGEHHSFAL 343
Score = 214 (80.4 bits), Expect = 4.8e-14, P = 4.8e-14
Identities = 64/175 (36%), Positives = 97/175 (55%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
++ I CG + ++ D G +L + Q ST RP SL + QV QIA G
Sbjct: 78 IRSIVCGEAGAVLLADDGKVL-----IMDQ----ST--VCRP--LKSLENRQVIQIACGD 124
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQA-ENVPKLLETPILESKRAKVVSCGARHSAV 409
H++ +S +G+++V+G N GQLG +QA P+ L++ + E A++ S G HS V
Sbjct: 125 QHSMALSNDGQLFVWGENTHGQLGLRKEQAGTQSPQHLQS-LCEIPVAQI-SAGGNHSFV 182
Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
L+ G V WG N GQLGLGD+ DR +P++V + G +I+CG HT L++
Sbjct: 183 LSLSGVVFGWGSNSAGQLGLGDTKDRFVPTIVKSLCGKKTVSISCGGEHTATLSK 237
>UNIPROTKB|I3LT85 [details] [associations]
symbol:RCC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051225 "spindle assembly" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0031492 "nucleosomal DNA binding" evidence=IEA]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=IEA] [GO:0007088 "regulation of mitosis" evidence=IEA]
[GO:0007059 "chromosome segregation" evidence=IEA] [GO:0007052
"mitotic spindle organization" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005087 "Ran guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0000794 "condensed
nuclear chromosome" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
GO:GO:0007088 GO:GO:0007059 GO:GO:0007052 GO:GO:0051225
GO:GO:0000082 GO:GO:0031965 GO:GO:0000790 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0000794 GO:GO:0005087
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0007090 GO:GO:0031492 GeneTree:ENSGT00700000104160 KO:K11493
CTD:1104 OMA:GTESCFV EMBL:FP565629 RefSeq:XP_003482053.1
Ensembl:ENSSSCT00000028011 GeneID:100621543 KEGG:ssc:100621543
Uniprot:I3LT85
Length = 421
Score = 247 (92.0 bits), Expect = 1.3e-18, P = 1.3e-18
Identities = 106/408 (25%), Positives = 169/408 (41%)
Query: 66 TSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
++E G ++T G D GQ L G++ E +P +P +V+A AG H V ++++G+
Sbjct: 31 STEPGLVLTLGQGD-VGQ--LGLGENVMERKKPALVPIPEDIVQAEAGGMHTVCLSKSGQ 87
Query: 125 VYTWGWRECVPSAKVTRDFGSAGS-FQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
VY++G C + RD GS Q + A S A E +
Sbjct: 88 VYSFG---CNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWG 144
Query: 184 SAREESENPASGD-EFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMXXXXXXXXXXXX 242
S R+ N G E S V + + + KVA+G H ++L+
Sbjct: 145 SFRDN--NGVIGLLEPMKKSMVPVQVQLSMPVVKVASGNDHLVMLT---ADGELYTLGSG 199
Query: 243 XXXXXSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSA 302
R+ P L G +R L+ + + S G G ++ CG +
Sbjct: 200 EQGQLGRV-----PELF-ANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTF 253
Query: 303 VVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQI--AAGLWHTVCISVEG 360
++ G + FG Y Q G T P +S + + + G HTVC+ EG
Sbjct: 254 AISSEGHVYGFGLSNYHQLGTPGTESCFVPQNLTSFKNSTKSWVRFSGGQHHTVCMDSEG 313
Query: 361 RVYVFGGNQFGQLGTGVDQAE-NVPKLLET-PILESKRAKVVSCGARHSAVLTEDGQVLS 418
R Y G ++G+LG G E +VP L+ P + S V+CGA +T+DG+V +
Sbjct: 314 RAYSLGRAEYGRLGLGEGAEEKSVPTLISRLPAVSS-----VACGASVGYAVTKDGRVFA 368
Query: 419 WGWNKYGQLGLGDSIDRNIPSLVP---IHGFLPRNIACGWWHTLLLAE 463
WG QLG G D P + + + +++ G HT+LL +
Sbjct: 369 WGMGTNYQLGTGQEEDAWSPVEMTGKQLENRMVLSVSSGGQHTVLLVK 416
Score = 199 (75.1 bits), Expect = 4.6e-13, P = 4.6e-13
Identities = 63/170 (37%), Positives = 92/170 (54%)
Query: 300 HSAVVTDAGALLTFGWGLYGQCGHG-STNDQLRPSYASSLMDIQVEQIAAGLWHTVCISV 358
H + T+ G +LT G G GQ G G + ++ +P+ DI V+ A G+ HTVC+S
Sbjct: 27 HRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVPIPEDI-VQAEAGGM-HTVCLSK 84
Query: 359 EGRVYVFGGNQFGQLG--TGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQV 416
G+VY FG N G LG T V+ +E VP +E L+ K +V S G H+A LTEDG+V
Sbjct: 85 SGQVYSFGCNDEGALGRDTSVEGSEMVPGKVE---LQEKVVQV-SAGDSHTAALTEDGRV 140
Query: 417 LSWGW--NKYGQLGLGDSIDRNIPSLVPIHGFLPR---NIACGWWHTLLL 461
WG + G +GL + + + S+VP+ L +A G H ++L
Sbjct: 141 FLWGSFRDNNGVIGLLEPMKK---SMVPVQVQLSMPVVKVASGNDHLVML 187
Score = 120 (47.3 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 39/138 (28%), Positives = 68/138 (49%)
Query: 279 SVNSSGKAGRSYVKEIACGGRHSAVVTDA-GALLTFGWGLYGQCGHGS-TNDQLRPSYAS 336
++ S + +S+V+ GG+H V D+ G + G YG+ G G ++ P+ S
Sbjct: 285 NLTSFKNSTKSWVR--FSGGQHHTVCMDSEGRAYSLGRAEYGRLGLGEGAEEKSVPTLIS 342
Query: 337 SLMDIQVEQIAAGLWHTVCISVEGRVYVFG-GNQFGQLGTGVDQAENVPKLLETPILESK 395
L V +A G ++ +GRV+ +G G + QLGTG ++ P + LE++
Sbjct: 343 RLP--AVSSVACGASVGYAVTKDGRVFAWGMGTNY-QLGTGQEEDAWSPVEMTGKQLENR 399
Query: 396 RAKVVSCGARHSAVLTED 413
VS G +H+ +L +D
Sbjct: 400 MVLSVSSGGQHTVLLVKD 417
Score = 90 (36.7 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 29/93 (31%), Positives = 41/93 (44%)
Query: 59 GCGFALATSESGKLITWGS-ADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
G A +E G++ WGS D+ G L ++ P + VVK A+G H V
Sbjct: 127 GDSHTAALTEDGRVFLWGSFRDNNGVIGLLEPMK-KSMVPVQVQLSMPVVKVASGNDHLV 185
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQ 150
+T GE+YT G E +V F + G Q
Sbjct: 186 MLTADGELYTLGSGEQGQLGRVPELFANRGGRQ 218
>RGD|1561739 [details] [associations]
symbol:Herc6 "HECT and RLD domain containing E3 ubiquitin
protein ligase family member 6" species:10116 "Rattus norvegicus"
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 RGD:1561739 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021
HOGENOM:HOG000208452 HOVERGEN:HBG050878 OrthoDB:EOG4N30N6
IPI:IPI00553869 EMBL:BC085921 UniGene:Rn.107120
ProteinModelPortal:Q5U2P8 PhosphoSite:Q5U2P8 UCSC:RGD:1561739
InParanoid:Q5U2P8 ArrayExpress:Q5U2P8 Genevestigator:Q5U2P8
Uniprot:Q5U2P8
Length = 1034
Score = 231 (86.4 bits), Expect = 1.5e-18, Sum P(2) = 1.5e-18
Identities = 62/200 (31%), Positives = 98/200 (49%)
Query: 268 GKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN 327
G+ + + +NS AG + +++CG HS +++ G + ++G GQ G G+
Sbjct: 115 GESKEISFMPTKINSL--AGIKII-QVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNL 171
Query: 328 -DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG-TGVDQAENVPK 385
Q P SL I + Q+AAG H+ +S+ G + +G N+ GQL +G E + K
Sbjct: 172 CSQASPQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYK 231
Query: 386 LLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHG 445
L++ +SCG H++VLTEDGQV ++G + QL R P L+ G
Sbjct: 232 PHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEGIG 291
Query: 446 FLPRNIACGWWHTLLLAETT 465
I CG +HT+ TT
Sbjct: 292 GHVSQIECGSYHTIAYVYTT 311
Score = 230 (86.0 bits), Expect = 2.0e-18, Sum P(2) = 2.0e-18
Identities = 59/184 (32%), Positives = 95/184 (51%)
Query: 290 YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND-QLRPSYASSLMDIQVEQIAA 348
++ ++CG HS V G + T+G G GQ G G + + P+ +SL I++ Q++
Sbjct: 81 HIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSC 140
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV-PKLLETPILESKRAKVVSCGARHS 407
G +H++ +S +G+V+ +G N+ GQLG G + P+ +++ LE V+ G HS
Sbjct: 141 GHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKS--LEGIPLAQVAAGGTHS 198
Query: 408 AVLTEDGQVLSWGWNKYGQLGL-GDSIDRNIPSLVPIHGFLPRN---IACGWWHTLLLAE 463
L+ G WG N+ GQL L G+S I I N I+CG+ HT +L E
Sbjct: 199 FALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTE 258
Query: 464 TTQI 467
Q+
Sbjct: 259 DGQV 262
Score = 228 (85.3 bits), Expect = 4.0e-16, Sum P(2) = 4.0e-16
Identities = 57/172 (33%), Positives = 88/172 (51%)
Query: 295 ACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTV 354
A G RHS ++ + + G GQ G S RP +L + ++ ++ G H+V
Sbjct: 34 ASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPIQALSTVHIDLVSCGKEHSV 93
Query: 355 CISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKV--VSCGARHSAVLTE 412
+ +GRV+ +G GQLG G +++ + + T I K+ VSCG HS L+E
Sbjct: 94 AVCHQGRVFTWGAGSEGQLGIG--ESKEI-SFMPTKINSLAGIKIIQVSCGHYHSLALSE 150
Query: 413 DGQVLSWGWNKYGQLGLGDSI-DRNIPSLVP-IHGFLPRNIACGWWHTLLLA 462
DGQV SWG N+ GQLGLG+++ + P V + G +A G H+ L+
Sbjct: 151 DGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALS 202
Score = 173 (66.0 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 40/129 (31%), Positives = 71/129 (55%)
Query: 341 IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVV 400
+++ + A+G H++ + RVY G N GQLG Q+ P+ ++ L + +V
Sbjct: 28 LKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPIQA--LSTVHIDLV 85
Query: 401 SCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRN-IPSLV-PIHGFLPRNIACGWWHT 458
SCG HS + G+V +WG GQLG+G+S + + +P+ + + G ++CG +H+
Sbjct: 86 SCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHS 145
Query: 459 LLLAETTQI 467
L L+E Q+
Sbjct: 146 LALSEDGQV 154
Score = 91 (37.1 bits), Expect = 0.00076, Sum P(3) = 0.00076
Identities = 30/110 (27%), Positives = 53/110 (48%)
Query: 26 GYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSY 85
G L SP+ + PI A D+ G ++A G++ TWG A EGQ
Sbjct: 58 GQLGQKSPQSTKRPEPIQAL---STVHIDLVSCGKEHSVAVCHQGRVFTWG-AGSEGQLG 113
Query: 86 LTSGKHGETPEPFPLPTEAS------VVKAAAGWAHCVSVTEAGEVYTWG 129
+ GE+ E +PT+ + +++ + G H ++++E G+V++WG
Sbjct: 114 I-----GESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWG 158
Score = 71 (30.1 bits), Expect = 1.5e-18, Sum P(2) = 1.5e-18
Identities = 23/88 (26%), Positives = 37/88 (42%)
Query: 43 PARLCGGDSWKDV-CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP 101
P RL G K + G +L + ++ + G + GQ S + + PEP
Sbjct: 19 PRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGD-NSRGQLGQKSPQSTKRPEPIQAL 77
Query: 102 TEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ + + G H V+V G V+TWG
Sbjct: 78 STVHIDLVSCGKEHSVAVCHQGRVFTWG 105
Score = 66 (28.3 bits), Expect = 0.00076, Sum P(3) = 0.00076
Identities = 29/96 (30%), Positives = 45/96 (46%)
Query: 262 LEHAA-SGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHS-AVVTDAGALLTFGWGLYG 319
L+H+ SG+ P L+ G G +V +I CG H+ A V G +++ G G
Sbjct: 273 LQHSPRSGRGGPQLIE-------GIGG--HVSQIECGSYHTIAYVYTTGQVVSLGRG--P 321
Query: 320 QCGHGSTNDQLRPS------YASSLMDIQVEQIAAG 349
C +T+ + S A L+DI+V+ I AG
Sbjct: 322 SCTSNATHQEAACSDVTCLLSAKDLVDIEVKDIFAG 357
Score = 54 (24.1 bits), Expect = 0.00076, Sum P(3) = 0.00076
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDM 230
SP V G+ + +VAAGG H+ LS M
Sbjct: 176 SPQKVKSLEGIPLAQVAAGGTHSFALSLM 204
Score = 51 (23.0 bits), Expect = 1.8e-16, Sum P(2) = 1.8e-16
Identities = 9/17 (52%), Positives = 14/17 (82%)
Query: 211 GVKITKVAAGGRHTLIL 227
G+K+ K A+G RH+L+L
Sbjct: 27 GLKLLKAASGERHSLLL 43
>UNIPROTKB|Q86SG6 [details] [associations]
symbol:NEK8 "Serine/threonine-protein kinase Nek8"
species:9606 "Homo sapiens" [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0072372 "primary cilium" evidence=ISS]
InterPro:IPR000719 InterPro:IPR002290 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 GO:GO:0005737 GO:GO:0005856
GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372
EMBL:CH471159 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 KO:K08857 Orphanet:655 EMBL:AC010761 CTD:284086
HOGENOM:HOG000006908 HOVERGEN:HBG098799 EMBL:AY242354 EMBL:AY267371
EMBL:BC112240 EMBL:BC113705 EMBL:AL833909 IPI:IPI00328397
RefSeq:NP_835464.1 UniGene:Hs.448468 ProteinModelPortal:Q86SG6
SMR:Q86SG6 IntAct:Q86SG6 STRING:Q86SG6 PhosphoSite:Q86SG6
DMDM:34098463 PaxDb:Q86SG6 PRIDE:Q86SG6 DNASU:284086
Ensembl:ENST00000268766 GeneID:284086 KEGG:hsa:284086
UCSC:uc002hcp.3 GeneCards:GC17P027055 HGNC:HGNC:13387 HPA:HPA040661
HPA:HPA040679 MIM:609799 MIM:613824 neXtProt:NX_Q86SG6
PharmGKB:PA38361 InParanoid:Q86SG6 OMA:EREVFAW OrthoDB:EOG4PZJ65
GenomeRNAi:284086 NextBio:94527 ArrayExpress:Q86SG6 Bgee:Q86SG6
CleanEx:HS_NEK8 Genevestigator:Q86SG6 GermOnline:ENSG00000160602
Uniprot:Q86SG6
Length = 692
Score = 244 (91.0 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
Identities = 50/146 (34%), Positives = 85/146 (58%)
Query: 284 GKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQV 343
G++G + +K +ACG +A +TD G ++TFG G G GHGS D +P+ +L+ ++
Sbjct: 387 GQSGVT-IKHVACGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEM 445
Query: 344 EQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCG 403
Q+A G H + +S E ++ +G G+LG G ++ + P+ + P+ + A+ V CG
Sbjct: 446 VQVACGASHVLALSTERELFAWGRGDSGRLGLGTRESHSCPQ--QVPMPPGQEAQRVVCG 503
Query: 404 ARHSAVLTEDGQVLSWGWNKYGQLGL 429
S +LT GQ L+ G N++ +LGL
Sbjct: 504 IDSSMILTVPGQALACGSNRFNKLGL 529
Score = 162 (62.1 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 49/180 (27%), Positives = 87/180 (48%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGS----TNDQLRPSYASSLMD----IQ 342
V ++A G A VT +G L+ + G G GS +Q +P + S ++ +
Sbjct: 334 VVQVAAGRTQKAGVTRSGRLILWEAPPLG-AGGGSLLPGAVEQPQPQFISRFLEGQSGVT 392
Query: 343 VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSC 402
++ +A G + T C++ G + FG G LG G + P ++E +L + +V +C
Sbjct: 393 IKHVACGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEA-LLGYEMVQV-AC 450
Query: 403 GARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIH-GFLPRNIACGWWHTLLL 461
GA H L+ + ++ +WG G+LGLG + P VP+ G + + CG +++L
Sbjct: 451 GASHVLALSTERELFAWGRGDSGRLGLGTRESHSCPQQVPMPPGQEAQRVVCGIDSSMIL 510
Score = 154 (59.3 bits), Expect = 5.9e-10, Sum P(2) = 5.9e-10
Identities = 50/186 (26%), Positives = 84/186 (45%)
Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQCG--HGSTNDQLRP--------SYA---SSL 338
+ + CG S ++T G L G + + G H S ++ P S+ S+
Sbjct: 498 QRVVCGIDSSMILTVPGQALACGSNRFNKLGLDHLSLGEEPVPHQQVEEALSFTLLGSAP 557
Query: 339 MDIQ-VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRA 397
+D + + I G H+ ++ G Y FG NQ GQLGT + P ++ LE +
Sbjct: 558 LDQEPLLSIDLGTAHSAAVTASGDCYTFGSNQHGQLGTNTRRGSRAPCKVQG--LEGIKM 615
Query: 398 KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI---HGFLPRNIACG 454
+V+CG + + + +V SWG G+LG D D +P V + H + +++C
Sbjct: 616 AMVACGDAFTVAIGAESEVYSWGKGARGRLGRRDE-DAGLPRPVQLDETHPYTVTSVSCC 674
Query: 455 WWHTLL 460
+TLL
Sbjct: 675 HGNTLL 680
Score = 142 (55.0 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 44/188 (23%), Positives = 80/188 (42%)
Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWH 352
++ACG H ++ L +G G G+ G G+ P + +++ G+
Sbjct: 447 QVACGASHVLALSTERELFAWGRGDSGRLGLGTRESHSCPQQVPMPPGQEAQRVVCGIDS 506
Query: 353 TVCISVEGRVYVFGGNQFGQLGTG-VDQAEN-VPK----------LLETPILESKRAKVV 400
++ ++V G+ G N+F +LG + E VP LL + L+ + +
Sbjct: 507 SMILTVPGQALACGSNRFNKLGLDHLSLGEEPVPHQQVEEALSFTLLGSAPLDQEPLLSI 566
Query: 401 SCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTL 459
G HSA +T G ++G N++GQLG P V + G +ACG T+
Sbjct: 567 DLGTAHSAAVTASGDCYTFGSNQHGQLGTNTRRGSRAPCKVQGLEGIKMAMVACGDAFTV 626
Query: 460 LLAETTQI 467
+ +++
Sbjct: 627 AIGAESEV 634
Score = 67 (28.6 bits), Expect = 5.9e-10, Sum P(2) = 5.9e-10
Identities = 27/106 (25%), Positives = 45/106 (42%)
Query: 28 LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDE--GQ 83
LPG + P +R G S + CG F ++ G ++T+GS + G
Sbjct: 369 LPGAVEQPQP---QFISRFLEGQSGVTIKHVACGDFFTACLTDRGIIMTFGSGSNGCLGH 425
Query: 84 SYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
LT E L E +V+ A G +H ++++ E++ WG
Sbjct: 426 GSLTDISQPTIVEAL-LGYE--MVQVACGASHVLALSTERELFAWG 468
Score = 63 (27.2 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 20/84 (23%), Positives = 33/84 (39%)
Query: 46 LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS 105
L G + + CG AL+T +L WG D G+ L + + P+ P+P
Sbjct: 440 LLGYEMVQVACGASHVLALSTER--ELFAWGRGDS-GRLGLGTRESHSCPQQVPMPPGQE 496
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWG 129
+ G + +T G+ G
Sbjct: 497 AQRVVCGIDSSMILTVPGQALACG 520
Score = 51 (23.0 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
Identities = 15/44 (34%), Positives = 19/44 (43%)
Query: 85 YLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTW 128
Y G G TP P+ VV+ AAG VT +G + W
Sbjct: 315 YAWGGGLG-TPLRLPM-LNTEVVQVAAGRTQKAGVTRSGRLILW 356
Score = 44 (20.5 bits), Expect = 8.9e-09, Sum P(3) = 8.9e-09
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILS 228
P +V G ++ +VA G H L LS
Sbjct: 434 PTIVEALLGYEMVQVACGASHVLALS 459
>ZFIN|ZDB-GENE-090311-56 [details] [associations]
symbol:si:ch73-190m4.1 "si:ch73-190m4.1"
species:7955 "Danio rerio" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0006464 "cellular protein modification process" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-090311-56
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00700000104312
EMBL:CR788312 EMBL:CU467858 IPI:IPI00933554 RefSeq:XP_688463.5
UniGene:Dr.113692 UniGene:Dr.113776 Ensembl:ENSDART00000111114
GeneID:559981 KEGG:dre:559981 NextBio:20883233 Uniprot:F1RDE7
Length = 992
Score = 254 (94.5 bits), Expect = 1.6e-18, P = 1.6e-18
Identities = 73/212 (34%), Positives = 104/212 (49%)
Query: 255 TPHLIPCLEHAASGKDR--PLLVRQGSVNSSGKAG--RSYVKEIACGGRHSAVVTDAGAL 310
T LI C E+ A D +L+ S S G V +IACG +HS +T+ G L
Sbjct: 80 TIRLIVCGEYGAVLLDDGGKVLIMDKSTECSPLKGLENRQVIQIACGDQHSMALTNDGQL 139
Query: 311 LTFGWGLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQ 369
+G GQ G + P + SL I V QI+AG H+ +S+ G V+ +GGN
Sbjct: 140 FVWGENALGQLGLRKEQAGTQSPRHLQSLCGIPVAQISAGGNHSFVLSLSGVVFGWGGNS 199
Query: 370 FGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
GQLG G VP ++ + L+ K+ +SCG H+A L + G V ++G +GQLG
Sbjct: 200 AGQLGLGDTTDRFVPTVVNS--LKRKKIVSISCGGEHTAALAKGGTVFTFGSGGFGQLGH 257
Query: 430 GDSIDRNIPSLVP-IHGFLPRNIACGWWHTLL 460
D + P LV + G + CG HTL+
Sbjct: 258 NSFKDEHHPRLVAELWGSKVSQVTCGRNHTLV 289
Score = 220 (82.5 bits), Expect = 8.4e-14, Sum P(2) = 8.4e-14
Identities = 52/151 (34%), Positives = 83/151 (54%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWG--LYGQCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
V +I+ GG HS V++ +G + FGWG GQ G G T D+ P+ +SL ++ I+
Sbjct: 173 VAQISAGGNHSFVLSLSGVV--FGWGGNSAGQLGLGDTTDRFVPTVVNSLKRKKIVSISC 230
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
G HT ++ G V+ FG FGQLG + E+ P+L+ L + V+CG H+
Sbjct: 231 GGEHTAALAKGGTVFTFGSGGFGQLGHNSFKDEHHPRLVAE--LWGSKVSQVTCGRNHTL 288
Query: 409 VLTEDGQVL-SWGWNKYGQLGLGDSIDRNIP 438
V T +++ S+G GQLG G+ + +++P
Sbjct: 289 VSTASPKLIYSFGCGMQGQLGNGEQVKQSVP 319
Score = 196 (74.1 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 51/127 (40%), Positives = 73/127 (57%)
Query: 342 QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA-ENVPKLLETPILESKRAKVV 400
QV QIA G H++ ++ +G+++V+G N GQLG +QA P+ L++ L +
Sbjct: 119 QVIQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQSPRHLQS--LCGIPVAQI 176
Query: 401 SCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR----NIACGWW 456
S G HS VL+ G V WG N GQLGLGD+ DR +P++V L R +I+CG
Sbjct: 177 SAGGNHSFVLSLSGVVFGWGGNSAGQLGLGDTTDRFVPTVV---NSLKRKKIVSISCGGE 233
Query: 457 HTLLLAE 463
HT LA+
Sbjct: 234 HTAALAK 240
Score = 178 (67.7 bits), Expect = 4.3e-12, Sum P(2) = 4.3e-12
Identities = 43/127 (33%), Positives = 63/127 (49%)
Query: 288 RSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA 347
R + I+CGG H+A + G + TFG G +GQ GH S D+ P + L +V Q+
Sbjct: 222 RKKIVSISCGGEHTAALAKGGTVFTFGSGGFGQLGHNSFKDEHHPRLVAELWGSKVSQVT 281
Query: 348 AGLWHTVCISVEGR-VYVFGGNQFGQLGTGVDQAENVPKLLETPIL---ESKRAKVVSCG 403
G HT+ + + +Y FG GQLG G ++VP ++ P E K+V+ G
Sbjct: 282 CGRNHTLVSTASPKLIYSFGCGMQGQLGNGEQVKQSVPLPVDQPTEYNDEYTIQKLVA-G 340
Query: 404 ARHSAVL 410
HS L
Sbjct: 341 ENHSFAL 347
Score = 66 (28.3 bits), Expect = 4.3e-12, Sum P(2) = 4.3e-12
Identities = 20/73 (27%), Positives = 34/73 (46%)
Query: 60 CG--FALATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAAGWAHC 116
CG ++A + G+L WG + GQ L + G ++P V + +AG H
Sbjct: 125 CGDQHSMALTNDGQLFVWGE-NALGQLGLRKEQAGTQSPRHLQSLCGIPVAQISAGGNHS 183
Query: 117 VSVTEAGEVYTWG 129
++ +G V+ WG
Sbjct: 184 FVLSLSGVVFGWG 196
Score = 64 (27.6 bits), Expect = 6.9e-12, Sum P(2) = 6.9e-12
Identities = 29/149 (19%), Positives = 51/149 (34%)
Query: 80 DEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKV 139
D+G L K E P V++ A G H +++T G+++ WG + +
Sbjct: 95 DDGGKVLIMDKSTEC-SPLKGLENRQVIQIACGDQHSMALTNDGQLFVWG-ENALGQLGL 152
Query: 140 TRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFF 199
++ AG+ +P Q + + + GD
Sbjct: 153 RKE--QAGTQSPRHLQSLCGIPVAQISAGGNHSFVLSLSGVVFGWGGNSAGQLGLGDTTD 210
Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILS 228
P +V KI ++ GG HT L+
Sbjct: 211 RFVPTVVNSLKRKKIVSISCGGEHTAALA 239
Score = 37 (18.1 bits), Expect = 8.4e-14, Sum P(2) = 8.4e-14
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACG 297
+P LVR G+ +S V++++ G
Sbjct: 17 KPELVRHGNCGIKSICPKSAVQDMSAG 43
>UNIPROTKB|E2QZC2 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
Ensembl:ENSCAFT00000029828 Uniprot:E2QZC2
Length = 701
Score = 244 (91.0 bits), Expect = 2.1e-18, Sum P(2) = 2.1e-18
Identities = 50/146 (34%), Positives = 85/146 (58%)
Query: 284 GKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQV 343
G++G + +K +ACG +A +TD G ++TFG G G GHGS ND +P+ +L+ ++
Sbjct: 396 GQSGVT-IKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQPTIVEALLGYEM 454
Query: 344 EQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCG 403
Q+A G H + +S E ++ +G G+LG G ++ + P+ + P + A+ V CG
Sbjct: 455 VQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESHSCPQQVSMP--PGQEAQRVVCG 512
Query: 404 ARHSAVLTEDGQVLSWGWNKYGQLGL 429
S +LT G+ L+ G N++ +LGL
Sbjct: 513 IDSSMILTVPGRALACGSNRFNKLGL 538
Score = 155 (59.6 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 48/186 (25%), Positives = 84/186 (45%)
Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQCG--------HGSTNDQLRPSYA-----SSL 338
+ + CG S ++T G L G + + G + N Q+ + + S+
Sbjct: 507 QRVVCGIDSSMILTVPGRALACGSNRFNKLGLDRLSLGEEPAPNQQVEEALSFTPLGSAP 566
Query: 339 MDIQ-VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRA 397
D + + + G H+ ++ G Y FG NQ GQLGT + P ++ L++ +
Sbjct: 567 FDREPLLSVDLGTAHSAAVTASGDCYTFGSNQHGQLGTNARRVSRAPCQVQG--LQNIKI 624
Query: 398 KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP---SLVPIHGFLPRNIACG 454
+V+CG + + +G+V SWG G+LG D D +P L IH + +++C
Sbjct: 625 AMVACGDAFTVAVGAEGEVYSWGKGARGRLGRRDE-DAGLPRPVQLDEIHPYTVTSVSCC 683
Query: 455 WWHTLL 460
+TLL
Sbjct: 684 HGNTLL 689
Score = 150 (57.9 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 46/179 (25%), Positives = 83/179 (46%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHG---STNDQLRPSYASSLMD----IQV 343
V ++A G A VT +G L+ + G G +Q +P + S ++ + +
Sbjct: 343 VVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGALLPGAVEQQQPQFVSRFLEGQSGVTI 402
Query: 344 EQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCG 403
+ +A G T C++ G + FG G LG G + P ++E +L + +V +CG
Sbjct: 403 KHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQPTIVEA-LLGYEMVQV-ACG 460
Query: 404 ARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIH-GFLPRNIACGWWHTLLL 461
A H L+ + ++ +WG G+LGLG + P V + G + + CG +++L
Sbjct: 461 ASHVLALSTERELFAWGRGDGGRLGLGTRESHSCPQQVSMPPGQEAQRVVCGIDSSMIL 519
Score = 145 (56.1 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 46/175 (26%), Positives = 76/175 (43%)
Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWH 352
++ACG H ++ L +G G G+ G G+ P S + +++ G+
Sbjct: 456 QVACGASHVLALSTERELFAWGRGDGGRLGLGTRESHSCPQQVSMPPGQEAQRVVCGIDS 515
Query: 353 TVCISVEGRVYVFGGNQFGQLGT-----GVDQAEN--VPKLLE-TPI----LESKRAKVV 400
++ ++V GR G N+F +LG G + A N V + L TP+ + + V
Sbjct: 516 SMILTVPGRALACGSNRFNKLGLDRLSLGEEPAPNQQVEEALSFTPLGSAPFDREPLLSV 575
Query: 401 SCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACG 454
G HSA +T G ++G N++GQLG P V + +ACG
Sbjct: 576 DLGTAHSAAVTASGDCYTFGSNQHGQLGTNARRVSRAPCQVQGLQNIKIAMVACG 630
Score = 134 (52.2 bits), Expect = 6.0e-08, Sum P(2) = 6.0e-08
Identities = 34/115 (29%), Positives = 52/115 (45%)
Query: 288 RSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA 347
R + + G HSA VT +G TFG +GQ G + P L +I++ +A
Sbjct: 569 REPLLSVDLGTAHSAAVTASGDCYTFGSNQHGQLGTNARRVSRAPCQVQGLQNIKIAMVA 628
Query: 348 AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSC 402
G TV + EG VY +G G+LG D+ +P+ ++ + VSC
Sbjct: 629 CGDAFTVAVGAEGEVYSWGKGARGRLGRR-DEDAGLPRPVQLDEIHPYTVTSVSC 682
Score = 69 (29.3 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 24/106 (22%), Positives = 46/106 (43%)
Query: 28 LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSY 85
LPG ++ P +R G S + CG F ++ G ++T+GS +
Sbjct: 378 LPGAVEQQQP---QFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSN---GC 431
Query: 86 LTSGKHGETPEPFPLPTEAS--VVKAAAGWAHCVSVTEAGEVYTWG 129
L G + +P + +V+ A G +H ++++ E++ WG
Sbjct: 432 LGHGSLNDISQPTIVEALLGYEMVQVACGASHVLALSTERELFAWG 477
Score = 52 (23.4 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 19/84 (22%), Positives = 31/84 (36%)
Query: 46 LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS 105
L G + + CG AL+T +L WG D G+ L + + P+ +P
Sbjct: 449 LLGYEMVQVACGASHVLALSTER--ELFAWGRGDG-GRLGLGTRESHSCPQQVSMPPGQE 505
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWG 129
+ G + +T G G
Sbjct: 506 AQRVVCGIDSSMILTVPGRALACG 529
Score = 50 (22.7 bits), Expect = 2.1e-18, Sum P(2) = 2.1e-18
Identities = 13/38 (34%), Positives = 16/38 (42%)
Query: 92 GETPEPFPLPT-EASVVKAAAGWAHCVSVTEAGEVYTW 128
G P LP VV+ AAG VT +G + W
Sbjct: 328 GGLSAPLRLPMLNTEVVQVAAGRTQKAGVTRSGRLILW 365
Score = 44 (20.5 bits), Expect = 9.0e-09, Sum P(3) = 9.0e-09
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILS 228
P +V G ++ +VA G H L LS
Sbjct: 443 PTIVEALLGYEMVQVACGASHVLALS 468
>TAIR|locus:2156233 [details] [associations]
symbol:RUG2 "RCC1/UVR8/GEF-like 2" species:3702
"Arabidopsis thaliana" [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0008150 "biological_process" evidence=ND] INTERPRO:IPR000408
Pfam:PF00415 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
HSSP:P18754 EMBL:BT005508 EMBL:AK117526 IPI:IPI00527447
RefSeq:NP_199644.2 UniGene:At.29855 ProteinModelPortal:Q8GYL6
SMR:Q8GYL6 PRIDE:Q8GYL6 EnsemblPlants:AT5G48330.1 GeneID:834886
KEGG:ath:AT5G48330 TAIR:At5g48330 HOGENOM:HOG000238877
InParanoid:Q8GYL6 OMA:SAGHYHS PhylomeDB:Q8GYL6
ProtClustDB:CLSN2680477 ArrayExpress:Q8GYL6 Genevestigator:Q8GYL6
Uniprot:Q8GYL6
Length = 455
Score = 221 (82.9 bits), Expect = 3.3e-18, Sum P(2) = 3.3e-18
Identities = 60/174 (34%), Positives = 93/174 (53%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
V +IACG HS ++ G LL+ G +YGQ G + ++P + + + IAAGL
Sbjct: 288 VADIACGSDHSLILCHDGTLLSAGSNIYGQLGRSKQDLGMKPV---DITESPIS-IAAGL 343
Query: 351 WHT--VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
H+ +C E + +G N+ QLG G + EN+P+ +E + + VS G HS
Sbjct: 344 GHSLAICNRGERNILSWGWNRSRQLGRG--KPENLPREVEG--FDGESPASVSAGRVHSL 399
Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLL 461
+TE G+ WG K G+LGLG S D P L+ + G + + +A G+ H+L+L
Sbjct: 400 CVTEKGEAWVWGCGKNGRLGLGSSSDEPEPMLLEDVEGCVLQAVA-GFDHSLIL 452
Score = 166 (63.5 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 50/164 (30%), Positives = 82/164 (50%)
Query: 310 LLTFGWGLYGQCGHGSTN------DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVY 363
+++FG G G G S++ D P+ S+L + I+AG +H++ ++ G ++
Sbjct: 46 VMSFGDGNLGALGLSSSSIPGMGMDAYEPTVVSNLPS-DISSISAGHYHSLAVTSSGEIW 104
Query: 364 VFGGNQFGQLGTGV-DQAENV---PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSW 419
+G N GQLG V D + + PK +E LE+ + SA + +DG + W
Sbjct: 105 AWGRNDEGQLGRIVIDSSRDSRSEPKRVEG--LENVNVQAAFASGVVSAAIGDDGSLWVW 162
Query: 420 GWNKYGQLGLGDSI-DRNIPSLVP-IHGFLPRNIACGWWHTLLL 461
G +K GQLGLG+ I + +PS V + ++ GW H L L
Sbjct: 163 GRSKRGQLGLGNGIIEARVPSRVENLAAEHVVKVSLGWGHALAL 206
Score = 151 (58.2 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 44/145 (30%), Positives = 69/145 (47%)
Query: 289 SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGH----GSTNDQLRPSYASSLMDIQVE 344
S + I+ G HS VT +G + +G GQ G S + + P L ++ V+
Sbjct: 82 SDISSISAGHYHSLAVTSSGEIWAWGRNDEGQLGRIVIDSSRDSRSEPKRVEGLENVNVQ 141
Query: 345 QIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCG 403
A + I +G ++V+G ++ GQLG G E VP +E L ++ VS G
Sbjct: 142 AAFASGVVSAAIGDDGSLWVWGRSKRGQLGLGNGIIEARVPSRVEN--LAAEHVVKVSLG 199
Query: 404 ARHSAVLTEDGQVLSWGWNKYGQLG 428
H+ LT DG+V WG+ G++G
Sbjct: 200 WGHALALTVDGKVFGWGYVADGRVG 224
Score = 135 (52.6 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 40/136 (29%), Positives = 62/136 (45%)
Query: 332 PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLETP 390
P + +V IA G H++ + +G + G N +GQLG P + E+P
Sbjct: 277 PCLVEETCNEKVADIACGSDHSLILCHDGTLLSAGSNIYGQLGRSKQDLGMKPVDITESP 336
Query: 391 ILESKRAKVVSCGARHSAVLTEDGQ--VLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFL 447
I ++ G HS + G+ +LSWGWN+ QLG G N+P V G
Sbjct: 337 IS-------IAAGLGHSLAICNRGERNILSWGWNRSRQLGRGKP--ENLPREVEGFDGES 387
Query: 448 PRNIACGWWHTLLLAE 463
P +++ G H+L + E
Sbjct: 388 PASVSAGRVHSLCVTE 403
Score = 135 (52.6 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 79/324 (24%), Positives = 130/324 (40%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGK-HGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
A + G L WG + GQ L +G P VVK + GW H +++T G
Sbjct: 152 AIGDDGSLWVWGRSK-RGQLGLGNGIIEARVPSRVENLAAEHVVKVSLGWGHALALTVDG 210
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGE---EVVKRR 180
+V+ WG+ V +V G+ G +++ S T+ + AG+ E +++
Sbjct: 211 KVFGWGY---VADGRV----GNVG-LPLEASLLDSI--TDGSMKGHHAAGDLNLEAAEKK 260
Query: 181 KTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS-DMXXXXXXXXX 239
+ +E++ P + + PCLV K+ +A G H+LIL D
Sbjct: 261 VVEAMSKENDMPIAWE------PCLVEETCNEKVADIACGSDHSLILCHDGTLLSAGSNI 314
Query: 240 XXXXXXXXSRIKMVP-----TPHLIPC-LEHAASGKDR-PLLVRQGSVNSSGKAGR---- 288
+ M P +P I L H+ + +R + N S + GR
Sbjct: 315 YGQLGRSKQDLGMKPVDITESPISIAAGLGHSLAICNRGERNILSWGWNRSRQLGRGKPE 374
Query: 289 SYVKEI----------ACGGR-HSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS 337
+ +E+ GR HS VT+ G +G G G+ G GS++D+ P
Sbjct: 375 NLPREVEGFDGESPASVSAGRVHSLCVTEKGEAWVWGCGKNGRLGLGSSSDEPEPML--- 431
Query: 338 LMDIQ--VEQIAAGLWHTVCISVE 359
L D++ V Q AG H++ + E
Sbjct: 432 LEDVEGCVLQAVAGFDHSLILVAE 455
Score = 119 (46.9 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 35/122 (28%), Positives = 57/122 (46%)
Query: 294 IACGGRHSAVVTDAGA--LLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW 351
IA G HS + + G +L++GW Q G G + P ++AG
Sbjct: 339 IAAGLGHSLAICNRGERNILSWGWNRSRQLGRGKPENL--PREVEGFDGESPASVSAGRV 396
Query: 352 HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLT 411
H++C++ +G +V+G + G+LG G E P LLE +E + V+ G HS +L
Sbjct: 397 HSLCVTEKGEAWVWGCGKNGRLGLGSSSDEPEPMLLED--VEGCVLQAVA-GFDHSLILV 453
Query: 412 ED 413
+
Sbjct: 454 AE 455
Score = 66 (28.3 bits), Expect = 3.3e-18, Sum P(2) = 3.3e-18
Identities = 12/30 (40%), Positives = 21/30 (70%)
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
LP++ S + +AG H ++VT +GE++ WG
Sbjct: 80 LPSDISSI--SAGHYHSLAVTSSGEIWAWG 107
Score = 61 (26.5 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 20/71 (28%), Positives = 34/71 (47%)
Query: 63 ALATSESGKLITWGSADDEGQ--SYLTSGKHGETPEPFPLPTEASV-VKAA-AGWAHCVS 118
+LA + SG++ WG +DEGQ + EP + +V V+AA A +
Sbjct: 94 SLAVTSSGEIWAWGR-NDEGQLGRIVIDSSRDSRSEPKRVEGLENVNVQAAFASGVVSAA 152
Query: 119 VTEAGEVYTWG 129
+ + G ++ WG
Sbjct: 153 IGDDGSLWVWG 163
Score = 50 (22.7 bits), Expect = 1.5e-16, Sum P(2) = 1.5e-16
Identities = 17/49 (34%), Positives = 23/49 (46%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVV 107
G G ALA + GK+ WG Y+ G+ G LP EAS++
Sbjct: 199 GWGHALALTVDGKVFGWG--------YVADGRVGNVG----LPLEASLL 235
>UNIPROTKB|F1NAG9 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GeneTree:ENSGT00700000104074
OMA:GCDGTFL EMBL:AADN02003466 IPI:IPI00598995
Ensembl:ENSGALT00000016792 Uniprot:F1NAG9
Length = 984
Score = 249 (92.7 bits), Expect = 3.4e-18, Sum P(2) = 3.4e-18
Identities = 62/189 (32%), Positives = 94/189 (49%)
Query: 285 KAGRSYVKEIACGGRHSAVVTDAGALLTF-----GWGLYGQCGHGSTNDQLRPSYASSLM 339
K+G S +++ G H AVVT L T+ G L+GQ GHG +P + L
Sbjct: 376 KSGCS-ARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDRASYRQPKHVEKLQ 434
Query: 340 DIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKV 399
+ Q++ G TVCI+ EG++Y FG + +G +G V + L+ + +
Sbjct: 435 GKAIRQVSCGDDFTVCITDEGQLYAFGSDYYGCIGIDKAYGSEVLEPLQLDFFLTNPVEQ 494
Query: 400 VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR-NIACGWWHT 458
VSCG H AVLT + +V +WG +YG+LGL D P V + L ++ CG T
Sbjct: 495 VSCGDNHVAVLTRNREVYTWGCGEYGRLGLDSEEDHYTPQKVDVPKTLNIVSVHCGCDGT 554
Query: 459 LLLAETTQI 467
LL +T ++
Sbjct: 555 FLLTQTGKV 563
Score = 176 (67.0 bits), Expect = 6.5e-13, Sum P(2) = 6.5e-13
Identities = 54/190 (28%), Positives = 88/190 (46%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
V++++CG H AV+T + T+G G YG+ G S D P + + + G
Sbjct: 492 VEQVSCGDNHVAVLTRNREVYTWGCGEYGRLGLDSEEDHYTPQKVDVPKTLNIVSVHCGC 551
Query: 351 WHTVCISVEGRVYVFGGNQFGQLG-----TGV---DQAENVPKLLETPI---LESKRAKV 399
T ++ G+V G N+F +LG +G+ D VP + L + +
Sbjct: 552 DGTFLLTQTGKVLACGLNEFNKLGLNQCTSGIINHDTYCEVPYATSLTLAKQLSFYKIRT 611
Query: 400 VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR-NIPSLV-PIHGFLPRNIACGWWH 457
+S G H+A + E G++L++G NK GQLG+GD I L P+ G ++CG
Sbjct: 612 ISPGKTHTASIDERGRLLTFGSNKCGQLGVGDYKKHLGINLLAGPLGGKQVIRVSCGDEF 671
Query: 458 TLLLAETTQI 467
T+ + I
Sbjct: 672 TIAATDDNHI 681
Score = 165 (63.1 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 57/196 (29%), Positives = 87/196 (44%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYG-----QCGHGSTNDQL--RPSYASSLM---- 339
+ + CG + ++T G +L G + QC G N YA+SL
Sbjct: 544 IVSVHCGCDGTFLLTQTGKVLACGLNEFNKLGLNQCTSGIINHDTYCEVPYATSLTLAKQ 603
Query: 340 --DIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLETPILESKR 396
++ I+ G HT I GR+ FG N+ GQLG G D +++ LL P L K+
Sbjct: 604 LSFYKIRTISPGKTHTASIDERGRLLTFGSNKCGQLGVG-DYKKHLGINLLAGP-LGGKQ 661
Query: 397 AKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL-------GDSIDRNIPSLVPIHGFLPR 449
VSCG + T+D + +WG G+L + G I + P PI G L
Sbjct: 662 VIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERAHGSDICTSWPR--PIFGSLHH 719
Query: 450 --NIACGWWHTLLLAE 463
+++C WHT+++ E
Sbjct: 720 VPDLSCRGWHTIIVVE 735
Score = 76 (31.8 bits), Expect = 6.5e-13, Sum P(2) = 6.5e-13
Identities = 33/114 (28%), Positives = 50/114 (43%)
Query: 22 VYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITW----GS 77
VY+WG T P+K L I + G S + VC G FA+ T E +L TW G
Sbjct: 359 VYVWGGGKST-PQK---LDAIKS----GCSARQVCAGNTHFAVVTVEK-ELYTWVNMQGG 409
Query: 78 ADDEGQSYLTSGKHGETPEPFPLPT-EASVVK-AAAGWAHCVSVTEAGEVYTWG 129
GQ L G +P + + ++ + G V +T+ G++Y +G
Sbjct: 410 TKLHGQ--LGHGDRASYRQPKHVEKLQGKAIRQVSCGDDFTVCITDEGQLYAFG 461
Score = 71 (30.1 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 24/77 (31%), Positives = 34/77 (44%)
Query: 60 CG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS--VVKAAAGWAH 115
CG F + ++ G+L +GS D G + E EP L + V + + G H
Sbjct: 443 CGDDFTVCITDEGQLYAFGS-DYYGCIGIDKAYGSEVLEPLQLDFFLTNPVEQVSCGDNH 501
Query: 116 CVSVTEAGEVYTWGWRE 132
+T EVYTWG E
Sbjct: 502 VAVLTRNREVYTWGCGE 518
Score = 62 (26.9 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 23/97 (23%), Positives = 41/97 (42%)
Query: 36 SPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETP 95
S +L P+ + + V G A+ T + ++ TWG + G+ L S + TP
Sbjct: 476 SEVLEPLQLDFFLTNPVEQVSCGDNHVAVLT-RNREVYTWGCGE-YGRLGLDSEEDHYTP 533
Query: 96 EPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ +P ++V G +T+ G+V G E
Sbjct: 534 QKVDVPKTLNIVSVHCGCDGTFLLTQTGKVLACGLNE 570
Score = 52 (23.4 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 19/67 (28%), Positives = 28/67 (41%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP-LPTEASVVKAAAGWAHCVSVTE 121
A+ TS + ++ WG GK TP+ + + S + AG H VT
Sbjct: 350 AVVTSRTSEVYVWGG-----------GK--STPQKLDAIKSGCSARQVCAGNTHFAVVTV 396
Query: 122 AGEVYTW 128
E+YTW
Sbjct: 397 EKELYTW 403
Score = 47 (21.6 bits), Expect = 3.4e-18, Sum P(2) = 3.4e-18
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQ 164
++ DFGS S + S G LP EQ
Sbjct: 32 ISSDFGSESSGRGGSRGGGGGLPGEQ 57
Score = 39 (18.8 bits), Expect = 2.3e-17, Sum P(2) = 2.3e-17
Identities = 7/19 (36%), Positives = 9/19 (47%)
Query: 117 VSVTEAGEVYTWGWRECVP 135
V + EVY WG + P
Sbjct: 351 VVTSRTSEVYVWGGGKSTP 369
>TAIR|locus:2079147 [details] [associations]
symbol:AT3G47660 "AT3G47660" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0008536
"Ran GTPase binding" evidence=ISS] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000306 Pfam:PF01363 SMART:SM00064
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002686 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046872 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 IPI:IPI00548806 RefSeq:NP_190350.4 UniGene:At.48747
UniGene:At.66547 ProteinModelPortal:F4JCN3 SMR:F4JCN3 PRIDE:F4JCN3
EnsemblPlants:AT3G47660.1 GeneID:823920 KEGG:ath:AT3G47660
OMA:CLSHEIS ArrayExpress:F4JCN3 Uniprot:F4JCN3
Length = 954
Score = 215 (80.7 bits), Expect = 5.9e-18, Sum P(2) = 5.9e-18
Identities = 63/187 (33%), Positives = 94/187 (50%)
Query: 293 EIA-CGGRHSAVVTDAGALLTFGWGLY--GQCGHGSTNDQLRPSYASSLMD-IQVEQIAA 348
E+A CG H+ VT +G L +G G + G G GS +P M+ I V+ I+
Sbjct: 354 ELADCGEFHTCAVTASGDLYAWGDGDHNAGLLGLGSGASHWKPVRILGQMEGIYVKAISC 413
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
G WHT ++ EG+++ FG FG LG G + N+P+ +E L R +CG HSA
Sbjct: 414 GPWHTAFVTSEGKLFTFGDGTFGALGHGDRISTNIPREVEA--LNGCRTIKAACGVWHSA 471
Query: 409 VL-------TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLL 460
+ T G++ +WG G+LG GD R IPS V + + +ACG T+
Sbjct: 472 AVVSVFGEATSSGKLFTWGDGDDGRLGHGDIECRLIPSCVTELDTTSFQQVACGQSITVA 531
Query: 461 LAETTQI 467
L+ + Q+
Sbjct: 532 LSMSGQV 538
Score = 209 (78.6 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 52/171 (30%), Positives = 83/171 (48%)
Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW 351
+ I+CG ++ +VT G + ++G G+ GHG + P VE G +
Sbjct: 302 QSISCGTNYAVLVTKQGQMYSWGEESGGRLGHGVCSYVPHPKLIDEFNGSTVELADCGEF 361
Query: 352 HTVCISVEGRVYVFGGNQF--GQLGTGVDQAENVP-KLLETPILESKRAKVVSCGARHSA 408
HT ++ G +Y +G G LG G + P ++L +E K +SCG H+A
Sbjct: 362 HTCAVTASGDLYAWGDGDHNAGLLGLGSGASHWKPVRILGQ--MEGIYVKAISCGPWHTA 419
Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHT 458
+T +G++ ++G +G LG GD I NIP V ++G ACG WH+
Sbjct: 420 FVTSEGKLFTFGDGTFGALGHGDRISTNIPREVEALNGCRTIKAACGVWHS 470
Score = 199 (75.1 bits), Expect = 3.8e-16, Sum P(2) = 3.8e-16
Identities = 60/171 (35%), Positives = 86/171 (50%)
Query: 295 ACGGRHSAVV-------TDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA 347
ACG HSA V T +G L T+G G G+ GHG +L PS + L +Q+A
Sbjct: 464 ACGVWHSAAVVSVFGEATSSGKLFTWGDGDDGRLGHGDIECRLIPSCVTELDTTSFQQVA 523
Query: 348 AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV---PKLLETPILESKRAKVVSCGA 404
G TV +S+ G+VY +GT D + ++ P +E + +S + V+CG
Sbjct: 524 CGQSITVALSMSGQVYA--------MGTA-DPSHDIVRAPSCIEGGLGKSF-VQEVACGF 573
Query: 405 RHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACG 454
H AVL +V +WG GQLG GD+ R +P+LV + G R + CG
Sbjct: 574 HHIAVLNSKAEVYTWGKGSNGQLGHGDTEYRCMPTLVKALKGKQVRKVVCG 624
Score = 179 (68.1 bits), Expect = 6.6e-14, Sum P(2) = 6.6e-14
Identities = 52/187 (27%), Positives = 85/187 (45%)
Query: 290 YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAG 349
YVK I+CG H+A VT G L TFG G +G GHG P +L + + A G
Sbjct: 407 YVKAISCGPWHTAFVTSEGKLFTFGDGTFGALGHGDRISTNIPREVEALNGCRTIKAACG 466
Query: 350 LWHTVCI-SV------EGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSC 402
+WH+ + SV G+++ +G G+LG G + +P + L++ + V+C
Sbjct: 467 VWHSAAVVSVFGEATSSGKLFTWGDGDDGRLGHGDIECRLIPSCVTE--LDTTSFQQVAC 524
Query: 403 GARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP--IHGFLPRNIACGWWHTLL 460
G + L+ GQV + G D + PS + + + +ACG+ H +
Sbjct: 525 GQSITVALSMSGQVYAMGTADPSH----DIV--RAPSCIEGGLGKSFVQEVACGFHHIAV 578
Query: 461 LAETTQI 467
L ++
Sbjct: 579 LNSKAEV 585
Score = 159 (61.0 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 41/151 (27%), Positives = 71/151 (47%)
Query: 314 GWGLYGQCGHGST--NDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
G G++ + G S+ D P S + + + I+ G + V ++ +G++Y +G G
Sbjct: 271 GGGMH-KSGSSSSLMTDSFLPKVLKSHVALDAQSISCGTNYAVLVTKQGQMYSWGEESGG 329
Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKY--GQLGL 429
+LG GV PKL++ ++ CG H+ +T G + +WG + G LGL
Sbjct: 330 RLGHGVCSYVPHPKLIDE--FNGSTVELADCGEFHTCAVTASGDLYAWGDGDHNAGLLGL 387
Query: 430 GDSID--RNIPSLVPIHGFLPRNIACGWWHT 458
G + + L + G + I+CG WHT
Sbjct: 388 GSGASHWKPVRILGQMEGIYVKAISCGPWHT 418
Score = 133 (51.9 bits), Expect = 7.7e-09, Sum P(2) = 7.7e-09
Identities = 30/83 (36%), Positives = 44/83 (53%)
Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPS 333
+VR S G G+S+V+E+ACG H AV+ + T+G G GQ GHG T + P+
Sbjct: 550 IVRAPSCIEGG-LGKSFVQEVACGFHHIAVLNSKAEVYTWGKGSNGQLGHGDTEYRCMPT 608
Query: 334 YASSLMDIQVEQIAAGLWHTVCI 356
+L QV ++ G +T I
Sbjct: 609 LVKALKGKQVRKVVCGSNYTATI 631
Score = 101 (40.6 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 30/121 (24%), Positives = 59/121 (48%)
Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR-PS-YASSLMDIQVEQIAAG 349
+++ACG + ++ +G + G ++D +R PS L V+++A G
Sbjct: 520 QQVACGQSITVALSMSGQVYAMGTA-------DPSHDIVRAPSCIEGGLGKSFVQEVACG 572
Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
H ++ + VY +G GQLG G + +P L++ L+ K+ + V CG+ ++A
Sbjct: 573 FHHIAVLNSKAEVYTWGKGSNGQLGHGDTEYRCMPTLVKA--LKGKQVRKVVCGSNYTAT 630
Query: 410 L 410
+
Sbjct: 631 I 631
Score = 82 (33.9 bits), Expect = 5.9e-18, Sum P(2) = 5.9e-18
Identities = 21/73 (28%), Positives = 35/73 (47%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT-EASVVKAA-AGWAHC 116
G +A+ ++ G++ +WG +E L G P P + S V+ A G H
Sbjct: 307 GTNYAVLVTKQGQMYSWG---EESGGRLGHGVCSYVPHPKLIDEFNGSTVELADCGEFHT 363
Query: 117 VSVTEAGEVYTWG 129
+VT +G++Y WG
Sbjct: 364 CAVTASGDLYAWG 376
Score = 72 (30.4 bits), Expect = 4.2e-15, Sum P(2) = 4.2e-15
Identities = 34/113 (30%), Positives = 46/113 (40%)
Query: 22 VYMWGYLPGTSPEKSPILSPIP-ARLCGGDSWKDVCGGGCG-F-ALATSESGKLITWGSA 78
+Y WG G + S +P +L + V CG F A + SG L WG
Sbjct: 320 MYSWGEESGGRLGHG-VCSYVPHPKLIDEFNGSTVELADCGEFHTCAVTASGDLYAWGDG 378
Query: 79 D-DEGQSYLTSGKHGETPEPFPLPTEASVVKA-AAGWAHCVSVTEAGEVYTWG 129
D + G L SG P E VKA + G H VT G+++T+G
Sbjct: 379 DHNAGLLGLGSGASHWKPVRILGQMEGIYVKAISCGPWHTAFVTSEGKLFTFG 431
Score = 50 (22.7 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 8/20 (40%), Positives = 14/20 (70%)
Query: 110 AAGWAHCVSVTEAGEVYTWG 129
+ G + V VT+ G++Y+WG
Sbjct: 305 SCGTNYAVLVTKQGQMYSWG 324
>ZFIN|ZDB-GENE-070615-14 [details] [associations]
symbol:zgc:163136 "zgc:163136" species:7955 "Danio
rerio" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0006464
"cellular protein modification process" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 ZFIN:ZDB-GENE-070615-14 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00700000104312 EMBL:BX321880 IPI:IPI00852092
Ensembl:ENSDART00000113072 OMA:CELECKL Bgee:F1Q5I9 Uniprot:F1Q5I9
Length = 997
Score = 249 (92.7 bits), Expect = 5.9e-18, P = 5.9e-18
Identities = 60/177 (33%), Positives = 93/177 (52%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAG 349
V +IACG +HS +T+ G L +G GQ G + P + SL I V QI+AG
Sbjct: 118 VIQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQSPQHLQSLCGIPVAQISAG 177
Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
H+ +S+ G V+ +G N GQLG G +P ++++ L K+ +SCG H+A
Sbjct: 178 GNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFIPTIVKS--LSGKKTVSISCGGEHTAT 235
Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETT 465
L++ G V ++G +GQLG D + P LV + G + CG HTL+ +++
Sbjct: 236 LSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLVAELWGSKVSQVTCGRHHTLVFEDSS 292
Score = 222 (83.2 bits), Expect = 6.3e-15, P = 6.3e-15
Identities = 53/151 (35%), Positives = 80/151 (52%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLY--GQCGHGSTNDQLRPSYASSLMDIQVEQIAA 348
V +I+ GG HS V++ +G + FGWG GQ G G T D+ P+ SL + I+
Sbjct: 171 VAQISAGGNHSFVLSLSGVV--FGWGSNSAGQLGLGDTTDRFIPTIVKSLSGKKTVSISC 228
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
G HT +S G V+ FG FGQLG + E+ P+L+ L + V+CG H+
Sbjct: 229 GGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLVAE--LWGSKVSQVTCGRHHTL 286
Query: 409 VLTEDG-QVLSWGWNKYGQLGLGDSIDRNIP 438
V + Q+ S+G GQLG G+ + +++P
Sbjct: 287 VFEDSSNQIYSFGCGMQGQLGNGEQVKQSVP 317
Score = 207 (77.9 bits), Expect = 2.9e-13, P = 2.9e-13
Identities = 60/175 (34%), Positives = 90/175 (51%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
++ I CG + ++ D G +L C RP L + QV QIA G
Sbjct: 79 IRSIVCGEAGAVLLADDGKVLVMDQSTV--C---------RP--LKGLENRQVIQIACGD 125
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQA-ENVPKLLETPILESKRAKVVSCGARHSAV 409
H++ ++ +G+++V+G N GQLG +QA P+ L++ L +S G HS V
Sbjct: 126 QHSMALTNDGQLFVWGENALGQLGLRKEQAGTQSPQHLQS--LCGIPVAQISAGGNHSFV 183
Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
L+ G V WG N GQLGLGD+ DR IP++V + G +I+CG HT L++
Sbjct: 184 LSLSGVVFGWGSNSAGQLGLGDTTDRFIPTIVKSLSGKKTVSISCGGEHTATLSK 238
>UNIPROTKB|I3L8I2 [details] [associations]
symbol:LOC100737658 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
InterPro:IPR000719 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104137 Ensembl:ENSSSCT00000025619
Uniprot:I3L8I2
Length = 676
Score = 249 (92.7 bits), Expect = 6.4e-18, Sum P(2) = 6.4e-18
Identities = 52/146 (35%), Positives = 85/146 (58%)
Query: 284 GKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQV 343
G++G + +K +ACG +A +TD G ++TFG G G GHGS ND +P+ +L+ ++
Sbjct: 378 GQSGVT-IKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQPTIVEALLGYEM 436
Query: 344 EQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCG 403
Q+A G H + +S E ++ +G G+LG G ++ P+L+ P + A+ V CG
Sbjct: 437 VQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESHCCPQLVPMP--PGQEAQRVVCG 494
Query: 404 ARHSAVLTEDGQVLSWGWNKYGQLGL 429
S +LT GQ L+ G N++ +LGL
Sbjct: 495 IDSSMILTVPGQALACGSNRFNKLGL 520
Score = 146 (56.5 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 38/139 (27%), Positives = 69/139 (49%)
Query: 328 DQLRPSYASSLMD----IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV 383
+Q +P + S ++ + ++ +A G T C++ G + FG G LG G +
Sbjct: 365 EQPQPQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQ 424
Query: 384 PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
P ++E +L + +V +CGA H L+ + ++ +WG G+LGLG P LVP+
Sbjct: 425 PTIVEA-LLGYEMVQV-ACGASHVLALSTERELFAWGRGDGGRLGLGTRESHCCPQLVPM 482
Query: 444 H-GFLPRNIACGWWHTLLL 461
G + + CG +++L
Sbjct: 483 PPGQEAQRVVCGIDSSMIL 501
Score = 39 (18.8 bits), Expect = 6.4e-18, Sum P(2) = 6.4e-18
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 95 PEPFPLPTEASVVKAAAG 112
P P P+P++A + A G
Sbjct: 340 PAPSPVPSQAPPLGAGGG 357
>UNIPROTKB|I3L5B6 [details] [associations]
symbol:LOC100737658 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
InterPro:IPR000719 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104137 Ensembl:ENSSSCT00000029356 OMA:PEREMAM
Uniprot:I3L5B6
Length = 680
Score = 249 (92.7 bits), Expect = 6.6e-18, Sum P(2) = 6.6e-18
Identities = 52/146 (35%), Positives = 85/146 (58%)
Query: 284 GKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQV 343
G++G + +K +ACG +A +TD G ++TFG G G GHGS ND +P+ +L+ ++
Sbjct: 382 GQSGVT-IKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQPTIVEALLGYEM 440
Query: 344 EQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCG 403
Q+A G H + +S E ++ +G G+LG G ++ P+L+ P + A+ V CG
Sbjct: 441 VQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESHCCPQLVPMP--PGQEAQRVVCG 498
Query: 404 ARHSAVLTEDGQVLSWGWNKYGQLGL 429
S +LT GQ L+ G N++ +LGL
Sbjct: 499 IDSSMILTVPGQALACGSNRFNKLGL 524
Score = 146 (56.5 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 38/139 (27%), Positives = 69/139 (49%)
Query: 328 DQLRPSYASSLMD----IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV 383
+Q +P + S ++ + ++ +A G T C++ G + FG G LG G +
Sbjct: 369 EQPQPQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQ 428
Query: 384 PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
P ++E +L + +V +CGA H L+ + ++ +WG G+LGLG P LVP+
Sbjct: 429 PTIVEA-LLGYEMVQV-ACGASHVLALSTERELFAWGRGDGGRLGLGTRESHCCPQLVPM 486
Query: 444 H-GFLPRNIACGWWHTLLL 461
G + + CG +++L
Sbjct: 487 PPGQEAQRVVCGIDSSMIL 505
Score = 39 (18.8 bits), Expect = 6.6e-18, Sum P(2) = 6.6e-18
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 95 PEPFPLPTEASVVKAAAG 112
P P P+P++A + A G
Sbjct: 344 PAPSPVPSQAPPLGAGGG 361
>RGD|1592835 [details] [associations]
symbol:Rcc1 "regulator of chromosome condensation 1"
species:10116 "Rattus norvegicus" [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=ISO] [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0000794 "condensed nuclear chromosome"
evidence=ISO] [GO:0003682 "chromatin binding" evidence=ISO]
[GO:0005087 "Ran guanyl-nucleotide exchange factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0007052 "mitotic spindle
organization" evidence=ISO] [GO:0007059 "chromosome segregation"
evidence=ISO] [GO:0007088 "regulation of mitosis" evidence=ISO]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=ISO] [GO:0031492 "nucleosomal DNA binding" evidence=ISO]
[GO:0031965 "nuclear membrane" evidence=ISO] [GO:0042393 "histone
binding" evidence=ISO] [GO:0050790 "regulation of catalytic
activity" evidence=ISO] [GO:0051225 "spindle assembly"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] RGD:1592835
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 EMBL:CH473968 KO:K11493 CTD:1104
HOVERGEN:HBG017712 EMBL:BC160834 IPI:IPI00896784
RefSeq:NP_001121661.1 UniGene:Rn.217123 SMR:B1H227 GeneID:682908
KEGG:rno:682908 NextBio:724000 Genevestigator:B1H227 Uniprot:B1H227
Length = 421
Score = 241 (89.9 bits), Expect = 6.6e-18, P = 6.6e-18
Identities = 110/412 (26%), Positives = 169/412 (41%)
Query: 67 SESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVY 126
+E G ++T G D GQ L E +P +P VV+A AG H V ++++G+VY
Sbjct: 32 TEPGLVLTLGQGD-VGQLGLGESVL-ERKKPALVPLLQDVVQAEAGGMHTVCLSQSGQVY 89
Query: 127 TWGWRECVPSAKVTRDFGSAGS-FQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSA 185
++G C + RD GS Q + A S A E + S
Sbjct: 90 SFG---CNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGSF 146
Query: 186 REESENPASGD-EFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMXXXXXXXXXXXXXX 244
R+ N G E S V + ++ KVA+G H ++L+
Sbjct: 147 RDN--NGVIGLLEPMKKSMVPVQVQLDTQVVKVASGNDHLVMLT---TDGDLYTLGCGEQ 201
Query: 245 XXXSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVV 304
R+ P L G +R L+ R + S G GR ++ CG + +
Sbjct: 202 GQLGRV-----PELF-ANRGGRQGLERLLVPRCVLLKSRGTRGRVRFQDAFCGAYFTFAI 255
Query: 305 TDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQI--AAGLWHTVCISVEGRV 362
+ G + FG Y Q G T P +S + + + G HTVC+ EG+
Sbjct: 256 SREGHVYGFGLSNYHQLGTPGTGSCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKA 315
Query: 363 YVFGGNQFGQLGTGVDQAE-NVPKLLET-PILESKRAKVVSCGARHSAVLTEDGQVLSWG 420
Y G ++G+LG G E ++P L+ P++ S V+CGA +++DG+V +WG
Sbjct: 316 YSLGRAEYGRLGLGEGAEEKSIPTLISRLPVVSS-----VACGASVGYAVSKDGRVFAWG 370
Query: 421 WNKYGQLGLGDSIDRNIPSLVPIHGFLPRN-----IACGWWHTLLLA-ETTQ 466
QLG G D P V + G N ++ G HT+LL + TQ
Sbjct: 371 MGTNYQLGTGQEDDAWSP--VEMTGKQLENREVLTVSSGGQHTVLLVKDKTQ 420
Score = 208 (78.3 bits), Expect = 4.3e-14, P = 4.3e-14
Identities = 64/170 (37%), Positives = 93/170 (54%)
Query: 300 HSAVVTDAGALLTFGWGLYGQCGHG-STNDQLRPSYASSLMDIQVEQIAAGLWHTVCISV 358
H + T+ G +LT G G GQ G G S ++ +P+ L D+ V+ A G+ HTVC+S
Sbjct: 27 HRSHNTEPGLVLTLGQGDVGQLGLGESVLERKKPALVPLLQDV-VQAEAGGM-HTVCLSQ 84
Query: 359 EGRVYVFGGNQFGQLG--TGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQV 416
G+VY FG N G LG T V+ +E VP +E L+ K +V S G H+A LTEDG+V
Sbjct: 85 SGQVYSFGCNDEGALGRDTSVEGSEMVPGKVE---LQEKVVQV-SAGDSHTAALTEDGRV 140
Query: 417 LSWGW--NKYGQLGLGDSIDRNIPSLVPIHGFLPRNI---ACGWWHTLLL 461
WG + G +GL + + + S+VP+ L + A G H ++L
Sbjct: 141 FLWGSFRDNNGVIGLLEPMKK---SMVPVQVQLDTQVVKVASGNDHLVML 187
>MGI|MGI:1344037 [details] [associations]
symbol:Rpgr "retinitis pigmentosa GTPase regulator"
species:10090 "Mus musculus" [GO:0001750 "photoreceptor outer
segment" evidence=ISO] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005929
"cilium" evidence=IDA] [GO:0007601 "visual perception"
evidence=ISO;IMP] [GO:0030030 "cell projection organization"
evidence=IEA] [GO:0042384 "cilium assembly" evidence=ISO]
[GO:0042462 "eye photoreceptor cell development" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0050896 "response
to stimulus" evidence=IEA] MGI:MGI:1344037 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005794 GO:GO:0005737 GO:GO:0005813
GO:GO:0005929 GO:GO:0007601 GO:GO:0050896 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042073
eggNOG:COG5184 GO:GO:0036064 GO:GO:0042462
GeneTree:ENSGT00700000104160 GO:GO:0036126 CTD:6103
HOGENOM:HOG000231314 HOVERGEN:HBG026899 ChiTaRS:RPGR EMBL:AF044677
EMBL:AJ238396 EMBL:AJ318464 EMBL:AL671042 EMBL:AK017192
EMBL:BX005236 EMBL:HQ260316 IPI:IPI00122416 IPI:IPI00128188
IPI:IPI00230648 IPI:IPI00230650 RefSeq:NP_001171421.1
RefSeq:NP_035415.1 UniGene:Mm.247556 ProteinModelPortal:Q9R0X5
SMR:Q9R0X5 DIP:DIP-46319N STRING:Q9R0X5 PhosphoSite:Q9R0X5
PRIDE:Q9R0X5 Ensembl:ENSMUST00000044598 GeneID:19893 KEGG:mmu:19893
UCSC:uc009sqj.2 InParanoid:Q9R0X5 NextBio:297416 CleanEx:MM_RPGR
Genevestigator:Q9R0X5 GermOnline:ENSMUSG00000031174 Uniprot:Q9R0X5
Length = 1001
Score = 242 (90.2 bits), Expect = 3.6e-17, P = 3.6e-17
Identities = 62/167 (37%), Positives = 90/167 (53%)
Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
++CG H+A+VT L FG +GQ G GS ++P+ +L +V+ A G HT
Sbjct: 40 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHT 99
Query: 354 VCISVEGRVYVFGGNQFGQLGTG-VDQAENVPKLLE-TPILESKRAKVVSCGARHSAVLT 411
+ + G VY GGN GQLG G D + +++ TP + K +S GA SA LT
Sbjct: 100 LVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTP---ADTIKQLSAGANTSAALT 156
Query: 412 EDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHT 458
EDG++ WG N GQ+GL D + IP V + G I+CG++H+
Sbjct: 157 EDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTV-GKPISWISCGYYHS 202
Score = 214 (80.4 bits), Expect = 6.9e-18, Sum P(2) = 6.9e-18
Identities = 63/175 (36%), Positives = 96/175 (54%)
Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCG--HGSTNDQLRPSYASSLMDIQVEQIAAGLW 351
I+CG HSA VT G L TFG G+ G + + P + + +V Q+A G
Sbjct: 195 ISCGYYHSAFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPE-RVIQVACGGG 253
Query: 352 HTVCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGARHSAVL 410
HTV ++ E VY FG QFGQLG G E + PK++E ++ ++ +SCG H+A++
Sbjct: 254 HTVVLT-EKVVYAFGLGQFGQLGLGTFLFETSEPKIIER--IKDQKICHISCGENHTALM 310
Query: 411 TEDGQVLSWGWNKYGQLGLG--DSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLA 462
TE G + ++G ++G+LGLG + ++ P+L F + IACG H L+ A
Sbjct: 311 TELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVFA 365
Score = 205 (77.2 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
Identities = 55/178 (30%), Positives = 93/178 (52%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ---VEQIA 347
VK ACG H+ V TD G + G GQ G G T+D R ++ + ++Q++
Sbjct: 89 VKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDD--RDTFHQIVFFTPADTIKQLS 146
Query: 348 AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHS 407
AG + ++ +G+++++G N GQ+G ++ NV + + K +SCG HS
Sbjct: 147 AGANTSAALTEDGKLFMWGDNSEGQIG--LEDKSNV--CIPHEVTVGKPISWISCGYYHS 202
Query: 408 AVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR--NIACGWWHTLLLAE 463
A +T DG++ ++G + G+LGL + + N S + G R +ACG HT++L E
Sbjct: 203 AFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPERVIQVACGGGHTVVLTE 260
Score = 174 (66.3 bits), Expect = 7.0e-10, Sum P(2) = 7.0e-10
Identities = 52/178 (29%), Positives = 92/178 (51%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
+K+++ G SA +T+ G L +G GQ G ++ P + + + I+ G
Sbjct: 142 IKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVT--VGKPISWISCGY 199
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAEN--VP-KLLETPILESKRAKVVSCGARHS 407
+H+ ++++G +Y FG + G+LG + N P ++L P +R V+CG H+
Sbjct: 200 YHSAFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIP----ERVIQVACGGGHT 255
Query: 408 AVLTEDGQVLSWGWNKYGQLGLGDSI-DRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
VLTE V ++G ++GQLGLG + + + P ++ I +I+CG HT L+ E
Sbjct: 256 VVLTEK-VVYAFGLGQFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTE 312
Score = 170 (64.9 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 46/135 (34%), Positives = 72/135 (53%)
Query: 302 AVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGR 361
++V D GA+ TFG + + N PS DI + ++ G HT ++ +
Sbjct: 6 SLVPDTGAVFTFGKTKFAE------NI---PSKFWFKNDIPI-CLSCGDEHTAIVTGNNK 55
Query: 362 VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
+Y+FG N +GQLG G A P ++ L+ ++ K+ +CG H+ V T+ G V + G
Sbjct: 56 LYMFGSNNWGQLGLGSKAAIIKPTCIKA--LKPEKVKLAACGRNHTLVSTDTGGVYAAGG 113
Query: 422 NKYGQLGLGDSIDRN 436
N GQLGLGD+ DR+
Sbjct: 114 NNEGQLGLGDTDDRD 128
Score = 83 (34.3 bits), Expect = 6.9e-18, Sum P(2) = 6.9e-18
Identities = 25/80 (31%), Positives = 37/80 (46%)
Query: 50 DSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA 109
D+ K + G + A +E GKL WG + EGQ L + P + S +
Sbjct: 140 DTIKQL-SAGANTSAALTEDGKLFMWGD-NSEGQIGLEDKSNVCIPHEVTVGKPISWI-- 195
Query: 110 AAGWAHCVSVTEAGEVYTWG 129
+ G+ H VT GE+YT+G
Sbjct: 196 SCGYYHSAFVTMDGELYTFG 215
Score = 49 (22.3 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 195 GDEFFTLSP-CLVTLNPGVKITKVAAGGRHTLILSD 229
G + + P C+ L P K+ A G HTL+ +D
Sbjct: 70 GSKAAIIKPTCIKALKPE-KVKLAACGRNHTLVSTD 104
Score = 43 (20.2 bits), Expect = 9.9e-14, Sum P(2) = 9.9e-14
Identities = 21/67 (31%), Positives = 28/67 (41%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
A+ T + KL +GS ++ GQ L S P V AA G H + T+
Sbjct: 48 AIVTGNN-KLYMFGS-NNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHTLVSTDT 105
Query: 123 GEVYTWG 129
G VY G
Sbjct: 106 GGVYAAG 112
>UNIPROTKB|Q92834 [details] [associations]
symbol:RPGR "X-linked retinitis pigmentosa GTPase
regulator" species:9606 "Homo sapiens" [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0050896 "response to stimulus" evidence=IEA] [GO:0035085
"cilium axoneme" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007601 "visual perception" evidence=IMP] [GO:0001750
"photoreceptor outer segment" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0042073 "intraflagellar transport" evidence=ISS]
[GO:0036064 "cilium basal body" evidence=ISS] [GO:0036126 "sperm
flagellum" evidence=ISS] [GO:0006886 "intracellular protein
transport" evidence=TAS] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005794 GO:GO:0005813 GO:GO:0006886 GO:GO:0007601
Orphanet:1872 Orphanet:791 GO:GO:0050896 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085 GO:GO:0042384
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:CH471141 GO:GO:0042073 GO:GO:0001750 eggNOG:COG5184
Orphanet:244 GO:GO:0036064 Orphanet:49382 GO:GO:0036126
EMBL:AL606748 CTD:6103 HOVERGEN:HBG026899 EMBL:U57629 EMBL:X97668
EMBL:AJ238395 EMBL:AJ318463 EMBL:BC031624 EMBL:AF286471
EMBL:BK005711 IPI:IPI00023757 IPI:IPI00215806 IPI:IPI00215807
IPI:IPI00215808 IPI:IPI00382445 IPI:IPI00397031 RefSeq:NP_000319.1
RefSeq:NP_001030025.1 UniGene:Hs.61438 ProteinModelPortal:Q92834
SMR:Q92834 STRING:Q92834 PhosphoSite:Q92834 DMDM:23503098
PaxDb:Q92834 PRIDE:Q92834 DNASU:6103 Ensembl:ENST00000309513
Ensembl:ENST00000318842 Ensembl:ENST00000338898
Ensembl:ENST00000339363 Ensembl:ENST00000342811
Ensembl:ENST00000378505 Ensembl:ENST00000474584
Ensembl:ENST00000482855 GeneID:6103 KEGG:hsa:6103 UCSC:uc004deb.3
GeneCards:GC0XM038128 HGNC:HGNC:10295 HPA:HPA001593 MIM:300029
MIM:300455 MIM:300834 MIM:304020 MIM:312610 neXtProt:NX_Q92834
Orphanet:247522 PharmGKB:PA34656 OMA:NNVLPHY PhylomeDB:Q92834
ChiTaRS:RPGR GenomeRNAi:6103 NextBio:23741 ArrayExpress:Q92834
Bgee:Q92834 CleanEx:HS_RPGR Genevestigator:Q92834
GermOnline:ENSG00000156313 Uniprot:Q92834
Length = 1020
Score = 248 (92.4 bits), Expect = 7.9e-18, P = 7.9e-18
Identities = 62/165 (37%), Positives = 88/165 (53%)
Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
++CG HSAVVT L FG +GQ G GS + +P+ +L +V+ A G HT
Sbjct: 40 LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHT 99
Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
+ + G VY GGN GQLG G + N ++ E K K +S G+ SA LTED
Sbjct: 100 LVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHK-IKQLSAGSNTSAALTED 158
Query: 414 GQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHT 458
G++ WG N GQ+GL + + +P V I G I+CG++H+
Sbjct: 159 GRLFMWGDNSEGQIGLKNVSNVCVPQQVTI-GKPVSWISCGYYHS 202
Score = 226 (84.6 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 62/178 (34%), Positives = 97/178 (54%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCG--HGSTNDQLRPSYASSLMDIQVEQIAA 348
V I+CG HSA VT G L FG G+ G + + P S + + +V Q+A
Sbjct: 192 VSWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPE-KVIQVAC 250
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGARHS 407
G HTV ++ E VY FG QFGQLG G E + PK++E + + +SCG H+
Sbjct: 251 GGEHTVVLT-ENAVYTFGLGQFGQLGLGTFLFETSEPKVIEN--IRDQTISYISCGENHT 307
Query: 408 AVLTEDGQVLSWGWNKYGQLGLG-DSIDRN-IPSLVP-IHGFLPRNIACGWWHTLLLA 462
A++T+ G + ++G ++G+LGLG ++ + IP+L F+ + +ACG H ++ A
Sbjct: 308 ALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVFA 365
Score = 193 (73.0 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 53/176 (30%), Positives = 89/176 (50%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLM-DIQVEQIAAG 349
VK ACG H+ V T+ G + G GQ G G T ++ S + +++Q++AG
Sbjct: 89 VKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAG 148
Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
+ ++ +GR++++G N GQ+G + NV + + K +SCG HSA
Sbjct: 149 SNTSAALTEDGRLFMWGDNSEGQIG--LKNVSNV--CVPQQVTIGKPVSWISCGYYHSAF 204
Query: 410 LTEDGQVLSWGWNKYGQLGLGDSI--DRNIPSLVPIHGFLPRNIACGWWHTLLLAE 463
+T DG++ +G + G+LGL + + + P LV +ACG HT++L E
Sbjct: 205 VTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTE 260
Score = 179 (68.1 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 44/134 (32%), Positives = 73/134 (54%)
Query: 303 VVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRV 362
++ D+GA+ TFG + + N+ P D+ V ++ G H+ ++ ++
Sbjct: 7 LMPDSGAVFTFGKSKFAE------NN---PGKFWFKNDVPVH-LSCGDEHSAVVTGNNKL 56
Query: 363 YVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWN 422
Y+FG N +GQLG G A + P ++ L+ ++ K+ +CG H+ V TE G V + G N
Sbjct: 57 YMFGSNNWGQLGLGSKSAISKPTCVKA--LKPEKVKLAACGRNHTLVSTEGGNVYATGGN 114
Query: 423 KYGQLGLGDSIDRN 436
GQLGLGD+ +RN
Sbjct: 115 NEGQLGLGDTEERN 128
Score = 108 (43.1 bits), Expect = 3.7e-07, Sum P(3) = 3.7e-07
Identities = 24/73 (32%), Positives = 39/73 (53%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN--DQLRPSYASSLMDIQVEQIAA 348
+ I+CG H+A++TD G + TFG G +G+ G G N + P+ S+ + V+ +A
Sbjct: 297 ISYISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVAC 356
Query: 349 GLWHTVCISVEGR 361
G H V + R
Sbjct: 357 GGCHMVVFAAPHR 369
Score = 79 (32.9 bits), Expect = 3.7e-07, Sum P(3) = 3.7e-07
Identities = 21/71 (29%), Positives = 34/71 (47%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G + A +E G+L WG + EGQ L + + P+ + S + + G+ H
Sbjct: 148 GSNTSAALTEDGRLFMWGD-NSEGQIGLKNVSNVCVPQQVTIGKPVSWI--SCGYYHSAF 204
Query: 119 VTEAGEVYTWG 129
VT GE+Y +G
Sbjct: 205 VTTDGELYVFG 215
Score = 68 (29.0 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 28/106 (26%), Positives = 44/106 (41%)
Query: 25 WGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQS 84
WG L G KS I P + + K + G L ++E G + G ++EGQ
Sbjct: 64 WGQL-GLG-SKSAISKPTCVKALKPEKVK-LAACGRNHTLVSTEGGNVYATGG-NNEGQL 119
Query: 85 YLTSGKHGETPEPFPLPT-EASVVKAAAGWAHCVSVTEAGEVYTWG 129
L + T T E + + +AG ++TE G ++ WG
Sbjct: 120 GLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTEDGRLFMWG 165
Score = 66 (28.3 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 34/115 (29%), Positives = 54/115 (46%)
Query: 22 VYMWG-YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF---ALATSESGKLITWGS 77
++MWG G K+ +P ++ G K V CG+ A T++ G+L +G
Sbjct: 161 LFMWGDNSEGQIGLKNVSNVCVPQQVTIG---KPVSWISCGYYHSAFVTTD-GELYVFGE 216
Query: 78 ADDEGQSYLTS---GKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
++ G+ L + G H TP+ E V++ A G H V +TE VYT+G
Sbjct: 217 PEN-GKLGLPNQLLGNH-RTPQLVSEIPE-KVIQVACGGEHTVVLTE-NAVYTFG 267
Score = 56 (24.8 bits), Expect = 3.7e-07, Sum P(3) = 3.7e-07
Identities = 12/28 (42%), Positives = 20/28 (71%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSD 229
+P LV+ P K+ +VA GG HT++L++
Sbjct: 234 TPQLVSEIPE-KVIQVACGGEHTVVLTE 260
Score = 52 (23.4 bits), Expect = 5.2e-16, Sum P(2) = 5.2e-16
Identities = 22/72 (30%), Positives = 29/72 (40%)
Query: 60 CG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
CG + + + KL +GS ++ GQ L S P V AA G H +
Sbjct: 42 CGDEHSAVVTGNNKLYMFGS-NNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHTL 100
Query: 118 SVTEAGEVYTWG 129
TE G VY G
Sbjct: 101 VSTEGGNVYATG 112
Score = 42 (19.8 bits), Expect = 5.7e-15, Sum P(2) = 5.7e-15
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 204 CLVTLNPGVKITKVAAGGRHTLILSD 229
C+ L P K+ A G HTL+ ++
Sbjct: 80 CVKALKPE-KVKLAACGRNHTLVSTE 104
>UNIPROTKB|F1PBB3 [details] [associations]
symbol:HERC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:HIFAGTY EMBL:AAEX03016752
EMBL:AAEX03016750 EMBL:AAEX03016751 Ensembl:ENSCAFT00000015531
Uniprot:F1PBB3
Length = 1018
Score = 239 (89.2 bits), Expect = 1.6e-17, Sum P(3) = 1.6e-17
Identities = 59/178 (33%), Positives = 93/178 (52%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST-NDQLRPSYASSLMDIQVEQIAAG 349
+K+++CG HS +++ G + ++G GQ G G Q P SL I + Q+AAG
Sbjct: 131 IKQVSCGHYHSLALSEGGQVFSWGSNSDGQLGLGKKFPSQASPQRVRSLDGIPLAQVAAG 190
Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLETPILESKRAKVVSCGARHSA 408
H+ +S+ G + +G N GQL + K L++ +SCG H+
Sbjct: 191 GAHSFALSLSGTSFGWGRNNAGQLALHKNNVSGQSYKPYSISALKNLGVIYISCGYEHTV 250
Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETT 465
VLT++G+V ++G N YGQLG + +++ P LV I G + + I CG +HTL TT
Sbjct: 251 VLTQNGKVFTFGDNTYGQLGHSPTAEKSGPQLVEGIDGLVSQ-IDCGSYHTLAYVYTT 307
Score = 215 (80.7 bits), Expect = 3.9e-14, Sum P(2) = 3.9e-14
Identities = 60/177 (33%), Positives = 91/177 (51%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGH-GST-NDQLRPSYASSLMDIQVEQIAA 348
+++ A G RHS ++ G + + G GQ G G+ + QL+ + L + V+ ++
Sbjct: 25 LRQAASGERHSLLLLSNGQVHSCGDNGRGQLGQRGAPCSAQLKERIRA-LETLHVDLVSC 83
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAEN-VPKLLETPILESKRAKVVSCGARHS 407
G H++ + +GRV+ +G GQLGTG + N +P ++T L + K VSCG HS
Sbjct: 84 GKEHSLAVCHKGRVFAWGAGSEGQLGTGEFKETNLIPMKIKT--LNDIKIKQVSCGHYHS 141
Query: 408 AVLTEDGQVLSWGWNKYGQLGLGDSIDRNI-PSLV-PIHGFLPRNIACGWWHTLLLA 462
L+E GQV SWG N GQLGLG P V + G +A G H+ L+
Sbjct: 142 LALSEGGQVFSWGSNSDGQLGLGKKFPSQASPQRVRSLDGIPLAQVAAGGAHSFALS 198
Score = 205 (77.2 bits), Expect = 4.2e-13, Sum P(2) = 4.2e-13
Identities = 56/186 (30%), Positives = 92/186 (49%)
Query: 290 YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND-QLRPSYASSLMDIQVEQIAA 348
+V ++CG HS V G + +G G GQ G G + L P +L DI+++Q++
Sbjct: 77 HVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGTGEFKETNLIPMKIKTLNDIKIKQVSC 136
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVD-QAENVPKLLETPILESKRAKVVSCGARHS 407
G +H++ +S G+V+ +G N GQLG G ++ P+ + + L+ V+ G HS
Sbjct: 137 GHYHSLALSEGGQVFSWGSNSDGQLGLGKKFPSQASPQRVRS--LDGIPLAQVAAGGAHS 194
Query: 408 AVLTEDGQVLSWGWNKYGQLGL------GDSIDRNIPSLVPIHGFLPRNIACGWWHTLLL 461
L+ G WG N GQL L G S S + G + I+CG+ HT++L
Sbjct: 195 FALSLSGTSFGWGRNNAGQLALHKNNVSGQSYKPYSISALKNLGVI--YISCGYEHTVVL 252
Query: 462 AETTQI 467
+ ++
Sbjct: 253 TQNGKV 258
Score = 170 (64.9 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 40/130 (30%), Positives = 70/130 (53%)
Query: 341 IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGT-GVDQAENVPKLLETPILESKRAKV 399
+++ Q A+G H++ + G+V+ G N GQLG G + + + + LE+ +
Sbjct: 23 VELRQAASGERHSLLLLSNGQVHSCGDNGRGQLGQRGAPCSAQLKERIRA--LETLHVDL 80
Query: 400 VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRN-IPSLVP-IHGFLPRNIACGWWH 457
VSCG HS + G+V +WG GQLG G+ + N IP + ++ + ++CG +H
Sbjct: 81 VSCGKEHSLAVCHKGRVFAWGAGSEGQLGTGEFKETNLIPMKIKTLNDIKIKQVSCGHYH 140
Query: 458 TLLLAETTQI 467
+L L+E Q+
Sbjct: 141 SLALSEGGQV 150
Score = 126 (49.4 bits), Expect = 2.1e-10, Sum P(3) = 2.1e-10
Identities = 28/74 (37%), Positives = 39/74 (52%)
Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
I+CG H+ V+T G + TFG YGQ GH T ++ P + D V QI G +HT
Sbjct: 242 ISCGYEHTVVLTQNGKVFTFGDNTYGQLGHSPTAEKSGPQLVEGI-DGLVSQIDCGSYHT 300
Query: 354 VC-ISVEGRVYVFG 366
+ + G+V FG
Sbjct: 301 LAYVYTTGKVVSFG 314
Score = 95 (38.5 bits), Expect = 2.1e-10, Sum P(3) = 2.1e-10
Identities = 24/75 (32%), Positives = 41/75 (54%)
Query: 60 CG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPE-PFPLPT--EASVVKAAAGWA 114
CG +LA G++ WG A EGQ L +G+ ET P + T + + + + G
Sbjct: 83 CGKEHSLAVCHKGRVFAWG-AGSEGQ--LGTGEFKETNLIPMKIKTLNDIKIKQVSCGHY 139
Query: 115 HCVSVTEAGEVYTWG 129
H ++++E G+V++WG
Sbjct: 140 HSLALSEGGQVFSWG 154
Score = 86 (35.3 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 33/115 (28%), Positives = 50/115 (43%)
Query: 22 VYMWGYLP----GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITW 75
V+ WG GT K L P+ + K V CG +LA SE G++ +W
Sbjct: 97 VFAWGAGSEGQLGTGEFKETNLIPMKIKTLNDIKIKQV---SCGHYHSLALSEGGQVFSW 153
Query: 76 GSADDEGQSYLTSGKHGE-TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
GS D GQ L + +P+ + + AAG AH +++ +G + WG
Sbjct: 154 GSNSD-GQLGLGKKFPSQASPQRVRSLDGIPLAQVAAGGAHSFALSLSGTSFGWG 207
Score = 53 (23.7 bits), Expect = 2.1e-10, Sum P(3) = 2.1e-10
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILS 228
SP V G+ + +VAAGG H+ LS
Sbjct: 172 SPQRVRSLDGIPLAQVAAGGAHSFALS 198
Score = 48 (22.0 bits), Expect = 1.6e-17, Sum P(3) = 1.6e-17
Identities = 17/44 (38%), Positives = 23/44 (52%)
Query: 189 SENPASGDEF--FTLSPCLV-TLNPGVKITKVAAGGRHTLILSD 229
SE EF L P + TLN +KI +V+ G H+L LS+
Sbjct: 104 SEGQLGTGEFKETNLIPMKIKTLND-IKIKQVSCGHYHSLALSE 146
Score = 47 (21.6 bits), Expect = 5.5e-17, Sum P(2) = 5.5e-17
Identities = 13/28 (46%), Positives = 16/28 (57%)
Query: 262 LEHAASGKDRPLLV-RQGSVNSSGKAGR 288
L AASG+ LL+ G V+S G GR
Sbjct: 25 LRQAASGERHSLLLLSNGQVHSCGDNGR 52
Score = 46 (21.3 bits), Expect = 7.0e-17, Sum P(2) = 7.0e-17
Identities = 8/17 (47%), Positives = 14/17 (82%)
Query: 211 GVKITKVAAGGRHTLIL 227
GV++ + A+G RH+L+L
Sbjct: 22 GVELRQAASGERHSLLL 38
Score = 44 (20.5 bits), Expect = 1.6e-17, Sum P(3) = 1.6e-17
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 110 AAGWAHCVSVTEAGEVYTWG 129
+ G H ++V G V+ WG
Sbjct: 82 SCGKEHSLAVCHKGRVFAWG 101
>UNIPROTKB|F1LPM8 [details] [associations]
symbol:Herc6 "Protein Herc6" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
RGD:1561739 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
EMBL:AC126722 IPI:IPI00553869 Ensembl:ENSRNOT00000058626
ArrayExpress:F1LPM8 Uniprot:F1LPM8
Length = 1036
Score = 229 (85.7 bits), Expect = 2.3e-17, Sum P(2) = 2.3e-17
Identities = 62/201 (30%), Positives = 99/201 (49%)
Query: 268 GKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN 327
G+ + + +NS AG + +++CG HS +++ G + ++G GQ G G+
Sbjct: 116 GESKEISFMPTKINSL--AGIKII-QVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNL 172
Query: 328 -DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD--QAENVP 384
Q P SL I + Q+AAG H+ +S+ G + +G N+ GQL + +AE +
Sbjct: 173 CSQASPQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSAKAEQIY 232
Query: 385 KLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIH 444
K L++ +SCG H++VLTEDGQV ++G + QL R P L+
Sbjct: 233 KPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEGI 292
Query: 445 GFLPRNIACGWWHTLLLAETT 465
G I CG +HT+ TT
Sbjct: 293 GGHVSQIECGSYHTIAYVYTT 313
Score = 221 (82.9 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 59/185 (31%), Positives = 95/185 (51%)
Query: 290 YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND-QLRPSYASSLMDIQVEQIAA 348
++ ++CG HS V G + T+G G GQ G G + + P+ +SL I++ Q++
Sbjct: 82 HIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSC 141
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV-PKLLETPILESKRAKVVSCGARHS 407
G +H++ +S +G+V+ +G N+ GQLG G + P+ +++ LE V+ G HS
Sbjct: 142 GHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKS--LEGIPLAQVAAGGTHS 199
Query: 408 AVLTEDGQVLSWGWNKYGQLGL-GDSID-RNIPSLVPIHGFLPRN---IACGWWHTLLLA 462
L+ G WG N+ GQL L G+S I I N I+CG+ HT +L
Sbjct: 200 FALSLMGTSFGWGNNRSGQLALSGNSAKAEQIYKPHSIGALKTLNVVYISCGYEHTSVLT 259
Query: 463 ETTQI 467
E Q+
Sbjct: 260 EDGQV 264
Score = 220 (82.5 bits), Expect = 3.3e-15, Sum P(2) = 3.3e-15
Identities = 57/173 (32%), Positives = 88/173 (50%)
Query: 295 ACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYA-SSLMDIQVEQIAAGLWHT 353
A G RHS ++ + + G GQ G S RP +L + ++ ++ G H+
Sbjct: 34 ASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEEPIQALSTVHIDLVSCGKEHS 93
Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKV--VSCGARHSAVLT 411
V + +GRV+ +G GQLG G +++ + + T I K+ VSCG HS L+
Sbjct: 94 VAVCHQGRVFTWGAGSEGQLGIG--ESKEI-SFMPTKINSLAGIKIIQVSCGHYHSLALS 150
Query: 412 EDGQVLSWGWNKYGQLGLGDSI-DRNIPSLVP-IHGFLPRNIACGWWHTLLLA 462
EDGQV SWG N+ GQLGLG+++ + P V + G +A G H+ L+
Sbjct: 151 EDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALS 203
Score = 173 (66.0 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 43/131 (32%), Positives = 71/131 (54%)
Query: 341 IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI--LESKRAK 398
+++ + A+G H++ + RVY G N GQLG Q+ P E PI L +
Sbjct: 28 LKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRP---EEPIQALSTVHID 84
Query: 399 VVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRN-IPSLV-PIHGFLPRNIACGWW 456
+VSCG HS + G+V +WG GQLG+G+S + + +P+ + + G ++CG +
Sbjct: 85 LVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHY 144
Query: 457 HTLLLAETTQI 467
H+L L+E Q+
Sbjct: 145 HSLALSEDGQV 155
Score = 62 (26.9 bits), Expect = 2.3e-17, Sum P(2) = 2.3e-17
Identities = 23/89 (25%), Positives = 37/89 (41%)
Query: 43 PARLCGGDSWKDV-CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPE-PFPL 100
P RL G K + G +L + ++ + G + GQ S + + PE P
Sbjct: 19 PRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGD-NSRGQLGQKSPQSTKRPEEPIQA 77
Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ + + G H V+V G V+TWG
Sbjct: 78 LSTVHIDLVSCGKEHSVAVCHQGRVFTWG 106
Score = 51 (23.0 bits), Expect = 3.1e-16, Sum P(2) = 3.1e-16
Identities = 9/17 (52%), Positives = 14/17 (82%)
Query: 211 GVKITKVAAGGRHTLIL 227
G+K+ K A+G RH+L+L
Sbjct: 27 GLKLLKAASGERHSLLL 43
Score = 41 (19.5 bits), Expect = 3.4e-15, Sum P(2) = 3.4e-15
Identities = 12/45 (26%), Positives = 18/45 (40%)
Query: 85 YLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
Y T P T ++KAA+G H + + VY+ G
Sbjct: 9 YFTWAPGRRQPRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCG 53
>MGI|MGI:1913989 [details] [associations]
symbol:Rcc1 "regulator of chromosome condensation 1"
species:10090 "Mus musculus" [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=ISO] [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0000794 "condensed nuclear chromosome"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=ISO;IDA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007052
"mitotic spindle organization" evidence=ISO] [GO:0007059
"chromosome segregation" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007088 "regulation of mitosis" evidence=ISO]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=ISO] [GO:0031492 "nucleosomal DNA binding" evidence=ISO]
[GO:0042393 "histone binding" evidence=ISO] [GO:0050790 "regulation
of catalytic activity" evidence=IDA] [GO:0051225 "spindle assembly"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
MGI:MGI:1913989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0007088 GO:GO:0007059 GO:GO:0051301
GO:GO:0007067 GO:GO:0007052 GO:GO:0051225 GO:GO:0000082
GO:GO:0031965 GO:GO:0000790 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0000794 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GO:GO:0007090 GO:GO:0031492 GeneTree:ENSGT00700000104160 KO:K11493
CTD:1104 HOGENOM:HOG000234341 HOVERGEN:HBG017712 EMBL:AK150153
EMBL:BC019807 IPI:IPI00626402 RefSeq:NP_598639.1 UniGene:Mm.255045
ProteinModelPortal:Q8VE37 SMR:Q8VE37 MINT:MINT-2568412
STRING:Q8VE37 PhosphoSite:Q8VE37 PaxDb:Q8VE37 PRIDE:Q8VE37
Ensembl:ENSMUST00000084250 Ensembl:ENSMUST00000105951 GeneID:100088
KEGG:mmu:100088 OrthoDB:EOG4320Z9 ChiTaRS:RCC1 NextBio:354253
Bgee:Q8VE37 CleanEx:MM_RCC1 Genevestigator:Q8VE37
GermOnline:ENSMUSG00000028896 Uniprot:Q8VE37
Length = 421
Score = 236 (88.1 bits), Expect = 2.6e-17, P = 2.6e-17
Identities = 105/406 (25%), Positives = 165/406 (40%)
Query: 67 SESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVY 126
+E G ++T G D GQ L E +P +P VV+A AG H V ++++G+VY
Sbjct: 32 TEPGLVLTLGQGD-VGQLGLGESVL-ERKKPALVPLLQDVVQAEAGGMHTVCLSQSGQVY 89
Query: 127 TWGWRECVPSAKVTRDFGSAGS-FQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSA 185
++G C + RD GS Q + A S A E + S
Sbjct: 90 SFG---CNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGSF 146
Query: 186 REESENPASGD-EFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMXXXXXXXXXXXXXX 244
R+ N G E S V + + KVA+G H ++L++
Sbjct: 147 RDN--NGVIGLLEPMKKSMVPVQVQLDAPVVKVASGNDHLVMLTN---DGDLYTLGCGEQ 201
Query: 245 XXXSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVV 304
R+ P L G R L+ R + S G GR ++ CG + +
Sbjct: 202 GQLGRV-----PELF-ANRGGRQGLGRLLVPRCVLLKSRGTRGRVRFQDAFCGAYFTFAI 255
Query: 305 TDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQI--AAGLWHTVCISVEGRV 362
+ G + FG Y Q G T P +S + + + G HTVC+ EG+
Sbjct: 256 SREGHVYGFGLSNYHQLGTPGTGSCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKA 315
Query: 363 YVFGGNQFGQLGTGVDQAE-NVPKLLET-PILESKRAKVVSCGARHSAVLTEDGQVLSWG 420
Y G ++G+LG G E ++P L+ P++ S V+CGA +++DG+V +WG
Sbjct: 316 YSLGRAEYGRLGLGEGAEEKSIPTLISRLPVVSS-----VACGASVGYAVSKDGRVFAWG 370
Query: 421 WNKYGQLGLGDSIDRNIPSLVP---IHGFLPRNIACGWWHTLLLAE 463
QLG G D P + + + ++ G HT+LL +
Sbjct: 371 MGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLTVSSGGQHTVLLVK 416
Score = 208 (78.3 bits), Expect = 4.3e-14, P = 4.3e-14
Identities = 62/168 (36%), Positives = 94/168 (55%)
Query: 300 HSAVVTDAGALLTFGWGLYGQCGHG-STNDQLRPSYASSLMDIQVEQIAAGLWHTVCISV 358
H + T+ G +LT G G GQ G G S ++ +P+ L D+ V+ A G+ HTVC+S
Sbjct: 27 HRSHNTEPGLVLTLGQGDVGQLGLGESVLERKKPALVPLLQDV-VQAEAGGM-HTVCLSQ 84
Query: 359 EGRVYVFGGNQFGQLG--TGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQV 416
G+VY FG N G LG T V+ +E VP +E L+ K +V S G H+A LTEDG+V
Sbjct: 85 SGQVYSFGCNDEGALGRDTSVEGSEMVPGKVE---LQEKVVQV-SAGDSHTAALTEDGRV 140
Query: 417 LSWGW--NKYGQLGLGDSIDRN-IPSLVPIHGFLPRNIACGWWHTLLL 461
WG + G +GL + + ++ +P V + + + +A G H ++L
Sbjct: 141 FLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDAPVVK-VASGNDHLVML 187
Score = 125 (49.1 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 38/120 (31%), Positives = 59/120 (49%)
Query: 297 GGRHSAVVTDA-GALLTFGWGLYGQCGHGS-TNDQLRPSYASSLMDIQVEQIAAGLWHTV 354
GG+H V D+ G + G YG+ G G ++ P+ S L V +A G
Sbjct: 301 GGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLP--VVSSVACGASVGY 358
Query: 355 CISVEGRVYVFG-GNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
+S +GRV+ +G G + QLGTG D+ P + LE++ VS G +H+ +L +D
Sbjct: 359 AVSKDGRVFAWGMGTNY-QLGTGQDEDAWSPVEMTGKQLENRVVLTVSSGGQHTVLLVKD 417
Score = 96 (38.9 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 29/93 (31%), Positives = 43/93 (46%)
Query: 59 GCGFALATSESGKLITWGS-ADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
G A +E G++ WGS D+ G L ++ P + +A VVK A+G H V
Sbjct: 127 GDSHTAALTEDGRVFLWGSFRDNNGVIGLLEPMK-KSMVPVQVQLDAPVVKVASGNDHLV 185
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQ 150
+T G++YT G E +V F + G Q
Sbjct: 186 MLTNDGDLYTLGCGEQGQLGRVPELFANRGGRQ 218
Score = 92 (37.4 bits), Expect = 5.8e-10, Sum P(2) = 5.8e-10
Identities = 22/72 (30%), Positives = 38/72 (52%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG + S+SG++ ++G +DEG + G P + + VV+ +AG +H
Sbjct: 75 GGM-HTVCLSQSGQVYSFG-CNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTA 132
Query: 118 SVTEAGEVYTWG 129
++TE G V+ WG
Sbjct: 133 ALTEDGRVFLWG 144
>UNIPROTKB|Q8IVU3 [details] [associations]
symbol:HERC6 "Probable E3 ubiquitin-protein ligase HERC6"
species:9606 "Homo sapiens" [GO:0005829 "cytosol" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 HOVERGEN:HBG050878 HSSP:Q9UEP9 EMBL:AF336798
EMBL:AY653201 EMBL:AK000644 EMBL:AK092403 EMBL:AK295832
EMBL:BC035775 EMBL:BC042047 EMBL:AL833664 EMBL:BX647121
IPI:IPI00168048 IPI:IPI00455627 IPI:IPI00554785
RefSeq:NP_001158608.1 RefSeq:NP_060382.3 UniGene:Hs.529317
ProteinModelPortal:Q8IVU3 SMR:Q8IVU3 IntAct:Q8IVU3 STRING:Q8IVU3
PhosphoSite:Q8IVU3 DMDM:74750679 PaxDb:Q8IVU3 PRIDE:Q8IVU3
Ensembl:ENST00000264346 Ensembl:ENST00000273960
Ensembl:ENST00000380265 GeneID:55008 KEGG:hsa:55008 UCSC:uc011cdi.2
UCSC:uc011cdj.2 CTD:55008 GeneCards:GC04P089299 HGNC:HGNC:26072
HPA:HPA035846 MIM:609249 neXtProt:NX_Q8IVU3 PharmGKB:PA134894313
InParanoid:Q8IVU3 OMA:HIFAGTY GenomeRNAi:55008 NextBio:58353
ArrayExpress:Q8IVU3 Bgee:Q8IVU3 Genevestigator:Q8IVU3
Uniprot:Q8IVU3
Length = 1022
Score = 239 (89.2 bits), Expect = 2.7e-17, Sum P(2) = 2.7e-17
Identities = 62/178 (34%), Positives = 93/178 (52%)
Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST-NDQLRPSYASSLMDIQVEQIAAGLW 351
+++CG HS ++ + ++G +GQ G G Q P SL I + Q+AAG
Sbjct: 132 QVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 191
Query: 352 HTVCISVEGRVYVFGGNQFGQL---GTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
H+ +S+ G + +G N GQL G V N P L L++ +SCG H+A
Sbjct: 192 HSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKP--LSVGALKNLGVVYISCGDAHTA 249
Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETT 465
VLT+DG+V ++G N+ GQLG + ++ P LV I G + + I CG +HTL TT
Sbjct: 250 VLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVSQ-IDCGSYHTLAYVHTT 306
Score = 209 (78.6 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 63/199 (31%), Positives = 95/199 (47%)
Query: 268 GKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGH-GST 326
G D L R+ + S G + + + A G RHS ++ +L+ G GQ G G+
Sbjct: 6 GADSRELQRRRTAGSPG----AELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQ 61
Query: 327 NDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG-VDQAENVPK 385
+L P +L + V+ ++ G H++ + +GRV+ +G GQLG G + PK
Sbjct: 62 RGEL-PEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPK 120
Query: 386 LLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI-PSLV-PI 443
+ T L + VSCG HS L++D QV SWG N +GQLGLG P V +
Sbjct: 121 KIMT--LNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSL 178
Query: 444 HGFLPRNIACGWWHTLLLA 462
G +A G H+ L+
Sbjct: 179 EGIPLAQVAAGGAHSFALS 197
Score = 163 (62.4 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 40/146 (27%), Positives = 74/146 (50%)
Query: 324 GSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV 383
G+ + +L+ + ++ Q A+G H++ + RV G N GQLG Q +
Sbjct: 6 GADSRELQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGEL 65
Query: 384 PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD--SIDRNIPSLV 441
P+ ++ LE+ +VSCG HS + G+V +WG GQLG+G+ I ++
Sbjct: 66 PEPIQA--LETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIM 123
Query: 442 PIHGFLPRNIACGWWHTLLLAETTQI 467
++ ++CG +H+L L++ +Q+
Sbjct: 124 TLNDIKIIQVSCGHYHSLALSKDSQV 149
Score = 122 (48.0 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 35/103 (33%), Positives = 50/103 (48%)
Query: 265 AASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHG 324
A SG++ P V+ S G V I+CG H+AV+T G + TFG GQ G+
Sbjct: 214 ALSGRNVP--VQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYS 271
Query: 325 STNDQLRPSYASSLMDIQVEQIAAGLWHTVC-ISVEGRVYVFG 366
T ++ P + D V QI G +HT+ + G+V FG
Sbjct: 272 PTPEKRGPQLVERI-DGLVSQIDCGSYHTLAYVHTTGQVVSFG 313
Score = 87 (35.7 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 23/95 (24%), Positives = 46/95 (48%)
Query: 60 CG--FALATSESGKLITWGSADDEGQSYLTSGKH-GETPEPFPLPTEASVVKAAAGWAHC 116
CG +LA G++ WG A EGQ + K TP+ + +++ + G H
Sbjct: 82 CGKEHSLAVCHKGRVFAWG-AGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHS 140
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
+++++ +V++WG + + ++F S S Q+
Sbjct: 141 LALSKDSQVFSWG-KNSHGQLGLGKEFPSQASPQR 174
Score = 79 (32.9 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 40/164 (24%), Positives = 62/164 (37%)
Query: 71 KLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
++++ G + GQ + GE PEP V + G H ++V G V+ WG
Sbjct: 43 RVLSCGD-NSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWG- 100
Query: 131 RECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGE----EVVKRRKTSSAR 186
A G G F++ S + + G + K + S
Sbjct: 101 ------AGSEGQLG-IGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWG 153
Query: 187 EESENPAS-GDEFFT-LSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ S G EF + SP V G+ + +VAAGG H+ LS
Sbjct: 154 KNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 197
Score = 50 (22.7 bits), Expect = 2.7e-17, Sum P(2) = 2.7e-17
Identities = 8/19 (42%), Positives = 15/19 (78%)
Query: 209 NPGVKITKVAAGGRHTLIL 227
+PG ++ + A+G RH+L+L
Sbjct: 20 SPGAELLQAASGERHSLLL 38
>UNIPROTKB|A7Z018 [details] [associations]
symbol:RCC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0000794 "condensed nuclear chromosome" evidence=IEA]
[GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=IEA] [GO:0051225
"spindle assembly" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031492 "nucleosomal DNA binding" evidence=IEA] [GO:0007090
"regulation of S phase of mitotic cell cycle" evidence=IEA]
[GO:0007088 "regulation of mitosis" evidence=IEA] [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0007052 "mitotic spindle
organization" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0007088 GO:GO:0007059 GO:GO:0007052
GO:GO:0051225 GO:GO:0000082 GO:GO:0031965 GO:GO:0000790
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0000794
GO:GO:0005087 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 GO:GO:0007090 GO:GO:0031492
GeneTree:ENSGT00700000104160 KO:K11493 CTD:1104
HOGENOM:HOG000234341 HOVERGEN:HBG017712 OrthoDB:EOG4320Z9
EMBL:DAAA02006335 EMBL:BC153215 IPI:IPI00868581
RefSeq:NP_001098878.1 UniGene:Bt.54942 SMR:A7Z018 STRING:A7Z018
Ensembl:ENSBTAT00000032060 GeneID:534142 KEGG:bta:534142
InParanoid:A7Z018 OMA:GTESCFV NextBio:20876286 Uniprot:A7Z018
Length = 422
Score = 235 (87.8 bits), Expect = 3.4e-17, P = 3.4e-17
Identities = 105/406 (25%), Positives = 167/406 (41%)
Query: 67 SESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEV 125
+E G ++T G D GQ L G++ E +P + +V+A AG H V ++++G+V
Sbjct: 32 TEPGVVLTLGQGD-VGQ--LGLGENVMERKKPALVSIPEDIVQAEAGGMHTVCLSKSGQV 88
Query: 126 YTWGWRECVPSAKVTRDFGSAGS-FQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSS 184
Y++G C + RD GS Q + A S A E + S
Sbjct: 89 YSFG---CNDEGALGRDTSVEGSEMVPGKVDLQEKVIQVSAGDSHTAALTEDGRVFLWGS 145
Query: 185 AREESENPASGD-EFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMXXXXXXXXXXXXX 243
R+ N G E S V + V + KVA+G H ++L+
Sbjct: 146 FRDN--NGVIGLLEPMKKSMVPVQVQLSVPVVKVASGNDHLVMLT---VDGDLYTLGSGE 200
Query: 244 XXXXSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAV 303
R+ P L G +R L+ + + S G G ++ CG +
Sbjct: 201 QGQLGRV-----PELF-ANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFA 254
Query: 304 VTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQI--AAGLWHTVCISVEGR 361
++ G + FG Y Q G T P +S + + + G HTVC+ EG+
Sbjct: 255 ISSEGHVYGFGLSNYHQLGTQGTESCFVPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGK 314
Query: 362 VYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWG 420
Y G ++G+LG G E +VP L+ P L + + V+CGA +T+DG+V +WG
Sbjct: 315 AYSLGRAEYGRLGLGEGAEEKSVPTLI--PRLPTVSS--VACGASVGYAVTKDGRVFAWG 370
Query: 421 WNKYGQLGLGDSIDRNIPSLVP---IHGFLPRNIACGWWHTLLLAE 463
QLG G D P + + + ++ G HT+LL +
Sbjct: 371 MGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLTVSSGGQHTVLLVK 416
Score = 199 (75.1 bits), Expect = 4.6e-13, P = 4.6e-13
Identities = 58/149 (38%), Positives = 85/149 (57%)
Query: 300 HSAVVTDAGALLTFGWGLYGQCGHG-STNDQLRPSYASSLMDIQVEQIAAGLWHTVCISV 358
H + T+ G +LT G G GQ G G + ++ +P+ S DI V+ A G+ HTVC+S
Sbjct: 27 HRSHGTEPGVVLTLGQGDVGQLGLGENVMERKKPALVSIPEDI-VQAEAGGM-HTVCLSK 84
Query: 359 EGRVYVFGGNQFGQLG--TGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQV 416
G+VY FG N G LG T V+ +E VP ++ L+ K +V S G H+A LTEDG+V
Sbjct: 85 SGQVYSFGCNDEGALGRDTSVEGSEMVPGKVD---LQEKVIQV-SAGDSHTAALTEDGRV 140
Query: 417 LSWGW--NKYGQLGLGDSIDRNIPSLVPI 443
WG + G +GL + + + S+VP+
Sbjct: 141 FLWGSFRDNNGVIGLLEPMKK---SMVPV 166
Score = 122 (48.0 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 38/126 (30%), Positives = 61/126 (48%)
Query: 297 GGRHSAVVTDA-GALLTFGWGLYGQCGHGS-TNDQLRPSYASSLMDIQVEQIAAGLWHTV 354
GG+H V D+ G + G YG+ G G ++ P+ L V +A G
Sbjct: 301 GGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSVPTLIPRLPT--VSSVACGASVGY 358
Query: 355 CISVEGRVYVFG-GNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
++ +GRV+ +G G + QLGTG D+ P + LE++ VS G +H+ +L +D
Sbjct: 359 AVTKDGRVFAWGMGTNY-QLGTGQDEDAWSPVEMTGKQLENRVVLTVSSGGQHTVLLVKD 417
Query: 414 GQVLSW 419
+ SW
Sbjct: 418 KEQ-SW 422
Score = 87 (35.7 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 28/93 (30%), Positives = 41/93 (44%)
Query: 59 GCGFALATSESGKLITWGS-ADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
G A +E G++ WGS D+ G L ++ P + VVK A+G H V
Sbjct: 127 GDSHTAALTEDGRVFLWGSFRDNNGVIGLLEPMK-KSMVPVQVQLSVPVVKVASGNDHLV 185
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQ 150
+T G++YT G E +V F + G Q
Sbjct: 186 MLTVDGDLYTLGSGEQGQLGRVPELFANRGGRQ 218
>RGD|1307187 [details] [associations]
symbol:Nek9 "NIMA-related kinase 9" species:10116 "Rattus
norvegicus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0019901 "protein kinase binding"
evidence=ISO] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 RGD:1307187 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS50012 OMA:GCDGTFL OrthoDB:EOG4NZTSM IPI:IPI00870835
Ensembl:ENSRNOT00000009300 UCSC:RGD:1307187 ArrayExpress:D4A4B2
Uniprot:D4A4B2
Length = 975
Score = 245 (91.3 bits), Expect = 4.0e-17, Sum P(2) = 4.0e-17
Identities = 64/192 (33%), Positives = 97/192 (50%)
Query: 285 KAGRSYVKEIACGGRHSAVVTDAGALLTF-----GWGLYGQCGHGSTNDQLRPSYASSLM 339
K+G S +++ G H AVVT L T+ G L+GQ GHG +P + L
Sbjct: 364 KSGCS-ARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQ 422
Query: 340 DIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILE---SKR 396
+ Q++ G TVC++ EG++Y FG + +G +G VD+ P++LE L S
Sbjct: 423 GKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMG--VDKVSG-PEVLEPMQLNFFLSNP 479
Query: 397 AKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI-HGFLPRNIACGW 455
+ VSCG H VLT + +V SWG +YG+LGL D P V + + + CG
Sbjct: 480 VEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGC 539
Query: 456 WHTLLLAETTQI 467
T LL ++ ++
Sbjct: 540 DGTFLLTQSGKV 551
Score = 164 (62.8 bits), Expect = 8.3e-12, Sum P(2) = 8.3e-12
Identities = 58/192 (30%), Positives = 85/192 (44%)
Query: 294 IACGGRHSAVVTDAGALLTFGWGLYG-----QCGHGSTNDQLR---P---SY--ASSLMD 340
+ CG + ++T +G +L G + QC G N + P S+ A L
Sbjct: 535 VQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSF 594
Query: 341 IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVV 400
++ IA G HT I GR+ FG N+ GQLG G + LL P L K+ V
Sbjct: 595 YKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGP-LGGKQVIRV 653
Query: 401 SCGARHSAVLTEDGQVLSWGWNKYGQLGL-------GDSIDRNIPSLVPIHGFLPR--NI 451
SCG + T+D + +WG G+L + G I + P PI G L ++
Sbjct: 654 SCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPR--PIFGSLHHVPDL 711
Query: 452 ACGWWHTLLLAE 463
+C WHT+L+ E
Sbjct: 712 SCRGWHTILIVE 723
Score = 163 (62.4 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 50/190 (26%), Positives = 89/190 (46%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
V++++CG H V+T + ++G G YG+ G S D P + + + G
Sbjct: 480 VEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGC 539
Query: 351 WHTVCISVEGRVYVFGGNQFGQLG-----TGVDQAE---NVPKLLETPI---LESKRAKV 399
T ++ G+V G N+F +LG +G+ E VP + L + +
Sbjct: 540 DGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRT 599
Query: 400 VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV--PIHGFLPRNIACGWWH 457
++ G H+A + E G++L++G NK GQLG+G+ R +L+ P+ G ++CG
Sbjct: 600 IAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEF 659
Query: 458 TLLLAETTQI 467
T+ + I
Sbjct: 660 TIAATDDNHI 669
Score = 78 (32.5 bits), Expect = 8.3e-12, Sum P(2) = 8.3e-12
Identities = 33/126 (26%), Positives = 56/126 (44%)
Query: 22 VYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDE 81
VY+WG T P+K ++ G S + VC G FA+ T E +L TW +
Sbjct: 347 VYVWGGGKST-PQKLDVIK-------SGCSARQVCAGNTHFAVVTVEK-ELYTWVNMQGG 397
Query: 82 GQSYLTSGKHGET-----PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG--WRECV 134
+ + G HG+ P+ ++ + + G V VT+ G++Y +G + C+
Sbjct: 398 TKLHGQLG-HGDKASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCM 456
Query: 135 PSAKVT 140
KV+
Sbjct: 457 GVDKVS 462
Score = 71 (30.1 bits), Expect = 4.4e-11, Sum P(2) = 4.4e-11
Identities = 25/77 (32%), Positives = 35/77 (45%)
Query: 60 CG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS--VVKAAAGWAH 115
CG F + ++ G+L +GS D G + E EP L S V + + G H
Sbjct: 431 CGDDFTVCVTDEGQLYAFGS-DYYGCMGVDKVSGPEVLEPMQLNFFLSNPVEQVSCGDNH 489
Query: 116 CVSVTEAGEVYTWGWRE 132
V +T EVY+WG E
Sbjct: 490 VVVLTRNKEVYSWGCGE 506
Score = 54 (24.1 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 17/75 (22%), Positives = 33/75 (44%)
Query: 60 CG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
CG + + + ++ +WG + G+ L S + TP+ +P +V G
Sbjct: 485 CGDNHVVVLTRNKEVYSWGCGE-YGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGCDGTF 543
Query: 118 SVTEAGEVYTWGWRE 132
+T++G+V G E
Sbjct: 544 LLTQSGKVLACGLNE 558
Score = 52 (23.4 bits), Expect = 4.0e-09, Sum P(2) = 4.0e-09
Identities = 19/67 (28%), Positives = 28/67 (41%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP-LPTEASVVKAAAGWAHCVSVTE 121
A+ TS + ++ WG GK TP+ + + S + AG H VT
Sbjct: 338 AVVTSRTSEVYVWGG-----------GK--STPQKLDVIKSGCSARQVCAGNTHFAVVTV 384
Query: 122 AGEVYTW 128
E+YTW
Sbjct: 385 EKELYTW 391
Score = 41 (19.5 bits), Expect = 4.0e-17, Sum P(2) = 4.0e-17
Identities = 11/39 (28%), Positives = 16/39 (41%)
Query: 97 PFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVP 135
P P ++V +A V + EVY WG + P
Sbjct: 323 PTKRPRSSTVTEAPIA----VVTSRTSEVYVWGGGKSTP 357
>MGI|MGI:2387995 [details] [associations]
symbol:Nek9 "NIMA (never in mitosis gene a)-related
expressed kinase 9" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0016310 "phosphorylation" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0016772 "transferase
activity, transferring phosphorus-containing groups" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 MGI:MGI:2387995
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0019901 GO:GO:0051301 GO:GO:0007067
GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 EMBL:CH466590
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104074 CTD:91754 HOVERGEN:HBG039572
OMA:GCDGTFL OrthoDB:EOG4NZTSM EMBL:AJ489828 EMBL:BC024926
EMBL:BC117971 EMBL:BC117972 IPI:IPI00169806 RefSeq:NP_660120.2
UniGene:Mm.29071 ProteinModelPortal:Q8K1R7 SMR:Q8K1R7
DIP:DIP-56880N IntAct:Q8K1R7 STRING:Q8K1R7 PhosphoSite:Q8K1R7
PaxDb:Q8K1R7 PRIDE:Q8K1R7 Ensembl:ENSMUST00000040992 GeneID:217718
KEGG:mmu:217718 InParanoid:Q148U2 NextBio:375996 Bgee:Q8K1R7
Genevestigator:Q8K1R7 GermOnline:ENSMUSG00000034290 Uniprot:Q8K1R7
Length = 984
Score = 245 (91.3 bits), Expect = 4.1e-17, Sum P(2) = 4.1e-17
Identities = 64/192 (33%), Positives = 97/192 (50%)
Query: 285 KAGRSYVKEIACGGRHSAVVTDAGALLTF-----GWGLYGQCGHGSTNDQLRPSYASSLM 339
K+G S +++ G H AVVT L T+ G L+GQ GHG +P + L
Sbjct: 366 KSGCS-ARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQ 424
Query: 340 DIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILE---SKR 396
+ Q++ G TVC++ EG++Y FG + +G +G VD+ P++LE L S
Sbjct: 425 GKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMG--VDKVSG-PEVLEPMQLNFFLSNP 481
Query: 397 AKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI-HGFLPRNIACGW 455
+ VSCG H VLT + +V SWG +YG+LGL D P V + + + CG
Sbjct: 482 VEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGC 541
Query: 456 WHTLLLAETTQI 467
T LL ++ ++
Sbjct: 542 DGTFLLTQSGKV 553
Score = 164 (62.8 bits), Expect = 8.5e-12, Sum P(2) = 8.5e-12
Identities = 58/192 (30%), Positives = 85/192 (44%)
Query: 294 IACGGRHSAVVTDAGALLTFGWGLYG-----QCGHGSTNDQLR---P---SY--ASSLMD 340
+ CG + ++T +G +L G + QC G N + P S+ A L
Sbjct: 537 VQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSF 596
Query: 341 IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVV 400
++ IA G HT I GR+ FG N+ GQLG G + LL P L K+ V
Sbjct: 597 YKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGP-LGGKQVIRV 655
Query: 401 SCGARHSAVLTEDGQVLSWGWNKYGQLGL-------GDSIDRNIPSLVPIHGFLPR--NI 451
SCG + T+D + +WG G+L + G I + P PI G L ++
Sbjct: 656 SCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPR--PIFGSLHHVPDL 713
Query: 452 ACGWWHTLLLAE 463
+C WHT+L+ E
Sbjct: 714 SCRGWHTILIVE 725
Score = 163 (62.4 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 50/190 (26%), Positives = 89/190 (46%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
V++++CG H V+T + ++G G YG+ G S D P + + + G
Sbjct: 482 VEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGC 541
Query: 351 WHTVCISVEGRVYVFGGNQFGQLG-----TGVDQAE---NVPKLLETPI---LESKRAKV 399
T ++ G+V G N+F +LG +G+ E VP + L + +
Sbjct: 542 DGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRT 601
Query: 400 VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV--PIHGFLPRNIACGWWH 457
++ G H+A + E G++L++G NK GQLG+G+ R +L+ P+ G ++CG
Sbjct: 602 IAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEF 661
Query: 458 TLLLAETTQI 467
T+ + I
Sbjct: 662 TIAATDDNHI 671
Score = 78 (32.5 bits), Expect = 8.5e-12, Sum P(2) = 8.5e-12
Identities = 33/126 (26%), Positives = 56/126 (44%)
Query: 22 VYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDE 81
VY+WG T P+K ++ G S + VC G FA+ T E +L TW +
Sbjct: 349 VYVWGGGKST-PQKLDVIK-------SGCSARQVCAGNTHFAVVTVEK-ELYTWVNMQGG 399
Query: 82 GQSYLTSGKHGET-----PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG--WRECV 134
+ + G HG+ P+ ++ + + G V VT+ G++Y +G + C+
Sbjct: 400 TKLHGQLG-HGDKASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCM 458
Query: 135 PSAKVT 140
KV+
Sbjct: 459 GVDKVS 464
Score = 71 (30.1 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 25/77 (32%), Positives = 35/77 (45%)
Query: 60 CG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS--VVKAAAGWAH 115
CG F + ++ G+L +GS D G + E EP L S V + + G H
Sbjct: 433 CGDDFTVCVTDEGQLYAFGS-DYYGCMGVDKVSGPEVLEPMQLNFFLSNPVEQVSCGDNH 491
Query: 116 CVSVTEAGEVYTWGWRE 132
V +T EVY+WG E
Sbjct: 492 VVVLTRNKEVYSWGCGE 508
Score = 54 (24.1 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 17/75 (22%), Positives = 33/75 (44%)
Query: 60 CG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
CG + + + ++ +WG + G+ L S + TP+ +P +V G
Sbjct: 487 CGDNHVVVLTRNKEVYSWGCGE-YGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGCDGTF 545
Query: 118 SVTEAGEVYTWGWRE 132
+T++G+V G E
Sbjct: 546 LLTQSGKVLACGLNE 560
Score = 52 (23.4 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 19/67 (28%), Positives = 28/67 (41%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP-LPTEASVVKAAAGWAHCVSVTE 121
A+ TS + ++ WG GK TP+ + + S + AG H VT
Sbjct: 340 AVVTSRTSEVYVWGG-----------GK--STPQKLDVIKSGCSARQVCAGNTHFAVVTV 386
Query: 122 AGEVYTW 128
E+YTW
Sbjct: 387 EKELYTW 393
Score = 41 (19.5 bits), Expect = 4.1e-17, Sum P(2) = 4.1e-17
Identities = 11/39 (28%), Positives = 16/39 (41%)
Query: 97 PFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVP 135
P P ++V +A V + EVY WG + P
Sbjct: 325 PTKRPRSSTVTEAPIA----VVTSRTSEVYVWGGGKSTP 359
Score = 37 (18.1 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 10/27 (37%), Positives = 13/27 (48%)
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQA 165
+ DFGS DS SA+P +A
Sbjct: 14 INSDFGSESGGGGDSGPGPSAVPGPRA 40
>RGD|1307558 [details] [associations]
symbol:Wbscr16 "Williams-Beuren syndrome chromosome region 16"
species:10116 "Rattus norvegicus" [GO:0005739 "mitochondrion"
evidence=IEA;ISO] RGD:1307558 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
EMBL:CH473973 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104312 CTD:81554 OMA:MVTLAKS
OrthoDB:EOG4F1X33 IPI:IPI00189798 RefSeq:NP_001101802.1
UniGene:Rn.40552 Ensembl:ENSRNOT00000002032 GeneID:360796
KEGG:rno:360796 UCSC:RGD:1307558 NextBio:674123 Uniprot:D4AE90
Length = 461
Score = 212 (79.7 bits), Expect = 4.2e-17, Sum P(2) = 4.2e-17
Identities = 52/155 (33%), Positives = 79/155 (50%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPS-YASSLMDIQVEQIAAG 349
V ++ CG HS +TD G + + GWG GQ G G N PS L + V Q+A
Sbjct: 229 VVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSTPSKLGGDLAGVTVVQVATY 288
Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGARHSA 408
+ +S +G V+ +G +++ QL + D + NVP+ L P + K V+CG A
Sbjct: 289 GDCCLALSADGGVFGWGNSEYLQLASVTDSTQVNVPRCL--PFSGVGKVKQVACGGTGCA 346
Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRN-IPSLVP 442
+L E+G V WG YG LG G ++ +P ++P
Sbjct: 347 ILNEEGHVFVWG---YGILGKGPNLSETALPEMIP 378
Score = 183 (69.5 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 54/179 (30%), Positives = 84/179 (46%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL-RPSY-ASSLMDI--QVEQI 346
V +++CG HS V+TD + + G +GQCG D++ S+ + D QV Q+
Sbjct: 173 VLQVSCGRAHSLVLTDREGVFSMGNNAHGQCGRKVVEDEVYSESHKVHRMQDFEGQVVQV 232
Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
G H++ ++ +G VY G GQ G G + P L + +V + G
Sbjct: 233 VCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSTPSKLGGDLAGVTVVQVATYGDCC 292
Query: 407 SAVLTEDGQVLSWGWNKYGQLG-LGDSIDRNIPSLVPIHGF-LPRNIACGWWHTLLLAE 463
A L+ DG V WG ++Y QL + DS N+P +P G + +ACG +L E
Sbjct: 293 LA-LSADGGVFGWGNSEYLQLASVTDSTQVNVPRCLPFSGVGKVKQVACGGTGCAILNE 350
Score = 162 (62.1 bits), Expect = 6.2e-12, Sum P(2) = 6.2e-12
Identities = 56/189 (29%), Positives = 90/189 (47%)
Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQLRPSYASSLMDI-Q 342
AG + V+ G A+ D G FGWG Y Q + + Q+ + +
Sbjct: 278 AGVTVVQVATYGDCCLALSADGGV---FGWGNSEYLQLASVTDSTQVNVPRCLPFSGVGK 334
Query: 343 VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAEN-VPKLLETPILE----SKRA 397
V+Q+A G ++ EG V+V+G +G LG G + +E +P+++ + +
Sbjct: 335 VKQVACGGTGCAILNEEGHVFVWG---YGILGKGPNLSETALPEMIPPTLFGLTEFNPEV 391
Query: 398 KV--VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGW 455
KV + CG H A LT G++ WG N G LG+G D+ P V + G P ++ACG
Sbjct: 392 KVSQIRCGLSHFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRVTMPGE-PVDVACGV 450
Query: 456 WHTLLLAET 464
H + LA++
Sbjct: 451 DHMVTLAKS 459
Score = 123 (48.4 bits), Expect = 0.00016, P = 0.00016
Identities = 32/102 (31%), Positives = 50/102 (49%)
Query: 340 DIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKV 399
+ +V Q++ G H++ ++ V+ G N GQ G V + E + + ++ +V
Sbjct: 170 ETKVLQVSCGRAHSLVLTDREGVFSMGNNAHGQCGRKVVEDEVYSESHKVHRMQDFEGQV 229
Query: 400 VS--CGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS 439
V CG HS LT+ G+V S GW GQ GLG + PS
Sbjct: 230 VQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSTPS 271
Score = 72 (30.4 bits), Expect = 6.2e-12, Sum P(2) = 6.2e-12
Identities = 26/96 (27%), Positives = 41/96 (42%)
Query: 40 SPIPARLCGGDSWKDVCGGGCGFA---LATSESGKLITWGSADDE-GQSYLTSGKHGETP 95
SP+P L K V CG A + T G +A + G+ + + E+
Sbjct: 159 SPVPLPLDRPQETK-VLQVSCGRAHSLVLTDREGVFSMGNNAHGQCGRKVVEDEVYSESH 217
Query: 96 EPFPLPT-EASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+ + E VV+ G H + +T+ GEVY+ GW
Sbjct: 218 KVHRMQDFEGQVVQVVCGQDHSLFLTDKGEVYSCGW 253
Score = 66 (28.3 bits), Expect = 4.2e-17, Sum P(2) = 4.2e-17
Identities = 31/115 (26%), Positives = 50/115 (43%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLIT--WGSA-DDEGQSYL 86
G P + + P+P RL D G GF L +S++ K +T WG + + Q
Sbjct: 86 GLRPRRR--IQPVPYRL-ELDHKISSAACGYGFTLLSSKT-KDVTKVWGMGLNKDSQLGF 141
Query: 87 TSGKHGET--------PEPFPLPT----EASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ +T P P PLP E V++ + G AH + +T+ V++ G
Sbjct: 142 HRSRKDKTRGYEYVLEPSPVPLPLDRPQETKVLQVSCGRAHSLVLTDREGVFSMG 196
Score = 43 (20.2 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 7/17 (41%), Positives = 13/17 (76%)
Query: 213 KITKVAAGGRHTLILSD 229
K+ +V+ G H+L+L+D
Sbjct: 172 KVLQVSCGRAHSLVLTD 188
>ZFIN|ZDB-GENE-070912-423 [details] [associations]
symbol:rpgra "retinitis pigmentosa GTPase regulator
a" species:7955 "Danio rerio" [GO:0072001 "renal system
development" evidence=IMP] INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-070912-423 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0072001 GeneTree:ENSGT00700000104160 EMBL:BX571713
IPI:IPI00955233 RefSeq:XP_003199276.1 Ensembl:ENSDART00000079095
GeneID:571327 KEGG:dre:571327 CTD:571327 NextBio:20890513
Bgee:F1QV77 Uniprot:F1QV77
Length = 1698
Score = 225 (84.3 bits), Expect = 4.3e-17, Sum P(2) = 4.3e-17
Identities = 61/188 (32%), Positives = 103/188 (54%)
Query: 287 GRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ-VEQ 345
G+S + ++CG RHSA+VTD+G + +FG G+ G S + SY + + V Q
Sbjct: 188 GQS-IHWVSCGYRHSALVTDSGDVYSFGESADGRLGL-SAHQLANHSYPQRVESLHSVLQ 245
Query: 346 IAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILES--KRAKV--VS 401
+A G HT+ ++ E +Y FGG +FGQLG G + + ++P+ ++ +V V+
Sbjct: 246 VACGGKHTLALT-EDELYCFGGGEFGQLGLGT-----LVFVADSPVAVGHFRKGRVTHVT 299
Query: 402 CGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRN--IPSLVP-IHGFLPRNIACGWWHT 458
CG +HSA++T+ G + ++G ++G+LG GD N P++ + +ACG H
Sbjct: 300 CGEQHSALITDSGLLYTFGDGRHGKLGHGDENFTNQFTPTVCQRFFEYSVMTVACGSSHM 359
Query: 459 LLLAETTQ 466
L+ A Q
Sbjct: 360 LVFARPRQ 367
Score = 225 (84.3 bits), Expect = 5.8e-15, P = 5.8e-15
Identities = 56/175 (32%), Positives = 87/175 (49%)
Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
I+CG HSA VT+ G L FG GQ G +P L + + +A G HT
Sbjct: 39 ISCGQSHSAFVTEQGRLFVFGDNNRGQLGLQIKGPVTKPVCVKVLKGERAQSVACGTDHT 98
Query: 354 VCISVEGRVYVFGGNQFGQLGTG-VDQAENVPKLLETPILESKRAKVVSCGARHSAVLTE 412
+ + +G + GGN GQLG G + + + +L P + K++S G SA LTE
Sbjct: 99 LVSTSQGEILAAGGNSDGQLGLGHCNDSISFQRL--RPFCDYAPIKLLSAGDHTSAALTE 156
Query: 413 DGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
DG++ WG N GQLG G+ +P + + G ++CG+ H+ L+ ++ +
Sbjct: 157 DGRLFLWGDNSAGQLGFGNDSHALLPKELNM-GQSIHWVSCGYRHSALVTDSGDV 210
Score = 224 (83.9 bits), Expect = 6.8e-14, Sum P(3) = 6.8e-14
Identities = 60/176 (34%), Positives = 89/176 (50%)
Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ-VEQIAAGL 350
+ +ACG H+ V T G +L G GQ G G ND + D ++ ++AG
Sbjct: 89 QSVACGTDHTLVSTSQGEILAAGGNSDGQLGLGHCNDSISFQRLRPFCDYAPIKLLSAGD 148
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
+ ++ +GR++++G N GQLG G D +PK L + VSCG RHSA++
Sbjct: 149 HTSAALTEDGRLFLWGDNSAGQLGFGNDSHALLPKELNM----GQSIHWVSCGYRHSALV 204
Query: 411 TEDGQVLSWGWNKYGQLGLG--DSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
T+ G V S+G + G+LGL + + P V +H L +ACG HTL L E
Sbjct: 205 TDSGDVYSFGESADGRLGLSAHQLANHSYPQRVESLHSVL--QVACGGKHTLALTE 258
Score = 180 (68.4 bits), Expect = 4.7e-12, Sum P(2) = 4.7e-12
Identities = 53/179 (29%), Positives = 89/179 (49%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
+K ++ G SA +T+ G L +G GQ G G+ + L P + M + ++ G
Sbjct: 141 IKLLSAGDHTSAALTEDGRLFLWGDNSAGQLGFGNDSHALLPKELN--MGQSIHWVSCGY 198
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAEN--VPKLLETPILESKRAKVVSCGARHSA 408
H+ ++ G VY FG + G+LG Q N P+ +E+ L S V+CG +H+
Sbjct: 199 RHSALVTDSGDVYSFGESADGRLGLSAHQLANHSYPQRVES--LHS--VLQVACGGKHTL 254
Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLP---RNIACGWWHTLLLAET 464
LTED ++ +G ++GQLGLG + S V + F ++ CG H+ L+ ++
Sbjct: 255 ALTED-ELYCFGGGEFGQLGLGTLVFV-ADSPVAVGHFRKGRVTHVTCGEQHSALITDS 311
Score = 173 (66.0 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 51/156 (32%), Positives = 76/156 (48%)
Query: 304 VTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVY 363
+ D GA+ TFG N+ PS DI V I+ G H+ ++ +GR++
Sbjct: 7 IPDTGAVFTFGKSKIA-------NNV--PSRLWLKSDIPVH-ISCGQSHSAFVTEQGRLF 56
Query: 364 VFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNK 423
VFG N GQLG + P ++ +L+ +RA+ V+CG H+ V T G++L+ G N
Sbjct: 57 VFGDNNRGQLGLQIKGPVTKPVCVK--VLKGERAQSVACGTDHTLVSTSQGEILAAGGNS 114
Query: 424 YGQLGLGDSIDR-NIPSLVPIHGFLPRNIACGWWHT 458
GQLGLG D + L P + P + HT
Sbjct: 115 DGQLGLGHCNDSISFQRLRPFCDYAPIKLLSAGDHT 150
Score = 129 (50.5 bits), Expect = 2.7e-08, Sum P(3) = 2.7e-08
Identities = 27/70 (38%), Positives = 39/70 (55%)
Query: 285 KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN--DQLRPSYASSLMDIQ 342
+ GR V + CG +HSA++TD+G L TFG G +G+ GHG N +Q P+ +
Sbjct: 291 RKGR--VTHVTCGEQHSALITDSGLLYTFGDGRHGKLGHGDENFTNQFTPTVCQRFFEYS 348
Query: 343 VEQIAAGLWH 352
V +A G H
Sbjct: 349 VMTVACGSSH 358
Score = 83 (34.3 bits), Expect = 2.7e-08, Sum P(3) = 2.7e-08
Identities = 20/65 (30%), Positives = 33/65 (50%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A +E G+L WG + GQ + H P+ L S+ + G+ H VT++G+
Sbjct: 153 ALTEDGRLFLWGD-NSAGQLGFGNDSHALLPKE--LNMGQSIHWVSCGYRHSALVTDSGD 209
Query: 125 VYTWG 129
VY++G
Sbjct: 210 VYSFG 214
Score = 69 (29.3 bits), Expect = 4.3e-17, Sum P(2) = 4.3e-17
Identities = 22/96 (22%), Positives = 42/96 (43%)
Query: 35 KSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDE-GQSYLTSGKHGE 93
K P+ P+ ++ G+ + V G ++TS+ L G++D + G + +
Sbjct: 71 KGPVTKPVCVKVLKGERAQSVACGTDHTLVSTSQGEILAAGGNSDGQLGLGHCNDSISFQ 130
Query: 94 TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
PF A + +AG ++TE G ++ WG
Sbjct: 131 RLRPFC--DYAPIKLLSAGDHTSAALTEDGRLFLWG 164
Score = 69 (29.3 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 25/78 (32%), Positives = 43/78 (55%)
Query: 60 CGF---ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA--SVVKAAAGWA 114
CG+ AL T +SG + ++G + D G+ L++ H +P E+ SV++ A G
Sbjct: 196 CGYRHSALVT-DSGDVYSFGESAD-GRLGLSA--HQLANHSYPQRVESLHSVLQVACGGK 251
Query: 115 HCVSVTEAGEVYTWGWRE 132
H +++TE E+Y +G E
Sbjct: 252 HTLALTE-DELYCFGGGE 268
Score = 48 (22.0 bits), Expect = 2.7e-08, Sum P(3) = 2.7e-08
Identities = 8/16 (50%), Positives = 13/16 (81%)
Query: 214 ITKVAAGGRHTLILSD 229
+ +VA GG+HTL L++
Sbjct: 243 VLQVACGGKHTLALTE 258
Score = 43 (20.2 bits), Expect = 5.2e-14, Sum P(3) = 5.2e-14
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 107 VKAAAGWAHCVSVTEAGEVYTWG 129
V + G +H VTE G ++ +G
Sbjct: 37 VHISCGQSHSAFVTEQGRLFVFG 59
Score = 39 (18.8 bits), Expect = 5.2e-14, Sum P(3) = 5.2e-14
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLI 226
P V + G + VA G HTL+
Sbjct: 77 PVCVKVLKGERAQSVACGTDHTLV 100
>UNIPROTKB|Q8TD19 [details] [associations]
symbol:NEK9 "Serine/threonine-protein kinase Nek9"
species:9606 "Homo sapiens" [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005739 "mitochondrion" evidence=IDA]
InterPro:IPR000719 InterPro:IPR002290 InterPro:IPR008271
InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0051301
GO:GO:0007067 GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
EMBL:AC007055 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
KO:K08857 CleanEx:HS_NEK8 EMBL:AY048580 EMBL:AY080896 EMBL:AB082526
EMBL:BC009336 EMBL:BC093881 EMBL:BC112101 IPI:IPI00301609
RefSeq:NP_149107.4 UniGene:Hs.7200 ProteinModelPortal:Q8TD19
SMR:Q8TD19 IntAct:Q8TD19 MINT:MINT-2984282 STRING:Q8TD19
PhosphoSite:Q8TD19 DMDM:116242675 PaxDb:Q8TD19 PeptideAtlas:Q8TD19
PRIDE:Q8TD19 DNASU:91754 Ensembl:ENST00000238616 GeneID:91754
KEGG:hsa:91754 UCSC:uc001xrl.3 CTD:91754 GeneCards:GC14M075548
HGNC:HGNC:18591 HPA:HPA001405 MIM:609798 neXtProt:NX_Q8TD19
PharmGKB:PA38593 HOVERGEN:HBG039572 InParanoid:Q8TD19 OMA:GCDGTFL
OrthoDB:EOG4NZTSM PhylomeDB:Q8TD19 BindingDB:Q8TD19
ChEMBL:CHEMBL5257 GenomeRNAi:91754 NextBio:77443
ArrayExpress:Q8TD19 Bgee:Q8TD19 CleanEx:HS_NEK9
Genevestigator:Q8TD19 GermOnline:ENSG00000119638 Uniprot:Q8TD19
Length = 979
Score = 244 (91.0 bits), Expect = 5.4e-17, Sum P(2) = 5.4e-17
Identities = 64/192 (33%), Positives = 97/192 (50%)
Query: 285 KAGRSYVKEIACGGRHSAVVTDAGALLTF-----GWGLYGQCGHGSTNDQLRPSYASSLM 339
K+G S +++ G H AVVT L T+ G L+GQ GHG +P + L
Sbjct: 366 KSGCS-ARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQ 424
Query: 340 DIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILE---SKR 396
+ Q++ G TVC++ EG++Y FG + +G +G VD+ P++LE L S
Sbjct: 425 GKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMG--VDKVAG-PEVLEPMQLNFFLSNP 481
Query: 397 AKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI-HGFLPRNIACGW 455
+ VSCG H VLT + +V SWG +YG+LGL D P V + + + CG
Sbjct: 482 VEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGC 541
Query: 456 WHTLLLAETTQI 467
T LL ++ ++
Sbjct: 542 DGTFLLTQSGKV 553
Score = 164 (62.8 bits), Expect = 8.4e-12, Sum P(2) = 8.4e-12
Identities = 58/192 (30%), Positives = 85/192 (44%)
Query: 294 IACGGRHSAVVTDAGALLTFGWGLYG-----QCGHGSTNDQLR---P---SY--ASSLMD 340
+ CG + ++T +G +L G + QC G N + P S+ A L
Sbjct: 537 VQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSF 596
Query: 341 IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVV 400
++ IA G HT I GR+ FG N+ GQLG G + LL P L K+ V
Sbjct: 597 YKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGP-LGGKQVIRV 655
Query: 401 SCGARHSAVLTEDGQVLSWGWNKYGQLGL-------GDSIDRNIPSLVPIHGFLPR--NI 451
SCG + T+D + +WG G+L + G I + P PI G L ++
Sbjct: 656 SCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPR--PIFGSLHHVPDL 713
Query: 452 ACGWWHTLLLAE 463
+C WHT+L+ E
Sbjct: 714 SCRGWHTILIVE 725
Score = 163 (62.4 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 50/190 (26%), Positives = 89/190 (46%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
V++++CG H V+T + ++G G YG+ G S D P + + + G
Sbjct: 482 VEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGC 541
Query: 351 WHTVCISVEGRVYVFGGNQFGQLG-----TGVDQAE---NVPKLLETPI---LESKRAKV 399
T ++ G+V G N+F +LG +G+ E VP + L + +
Sbjct: 542 DGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRT 601
Query: 400 VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV--PIHGFLPRNIACGWWH 457
++ G H+A + E G++L++G NK GQLG+G+ R +L+ P+ G ++CG
Sbjct: 602 IAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEF 661
Query: 458 TLLLAETTQI 467
T+ + I
Sbjct: 662 TIAATDDNHI 671
Score = 78 (32.5 bits), Expect = 8.4e-12, Sum P(2) = 8.4e-12
Identities = 32/114 (28%), Positives = 49/114 (42%)
Query: 22 VYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITW----GS 77
VY+WG T P+K ++ G S + VC G FA+ T E +L TW G
Sbjct: 349 VYVWGGGKST-PQKLDVIK-------SGCSARQVCAGNTHFAVVTVEK-ELYTWVNMQGG 399
Query: 78 ADDEGQSYLTSGKHGETPEPFPLPT-EASVVK-AAAGWAHCVSVTEAGEVYTWG 129
GQ L G +P + + ++ + G V VT+ G++Y +G
Sbjct: 400 TKLHGQ--LGHGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFG 451
Score = 70 (29.7 bits), Expect = 5.7e-11, Sum P(2) = 5.7e-11
Identities = 25/77 (32%), Positives = 35/77 (45%)
Query: 60 CG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS--VVKAAAGWAH 115
CG F + ++ G+L +GS D G + E EP L S V + + G H
Sbjct: 433 CGDDFTVCVTDEGQLYAFGS-DYYGCMGVDKVAGPEVLEPMQLNFFLSNPVEQVSCGDNH 491
Query: 116 CVSVTEAGEVYTWGWRE 132
V +T EVY+WG E
Sbjct: 492 VVVLTRNKEVYSWGCGE 508
Score = 55 (24.4 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 17/75 (22%), Positives = 33/75 (44%)
Query: 60 CG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
CG + + + ++ +WG + G+ L S + TP+ +P +V G
Sbjct: 487 CGDNHVVVLTRNKEVYSWGCGE-YGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTF 545
Query: 118 SVTEAGEVYTWGWRE 132
+T++G+V G E
Sbjct: 546 LLTQSGKVLACGLNE 560
Score = 52 (23.4 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 19/67 (28%), Positives = 28/67 (41%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP-LPTEASVVKAAAGWAHCVSVTE 121
A+ TS + ++ WG GK TP+ + + S + AG H VT
Sbjct: 340 AVVTSRTSEVYVWGG-----------GK--STPQKLDVIKSGCSARQVCAGNTHFAVVTV 386
Query: 122 AGEVYTW 128
E+YTW
Sbjct: 387 EKELYTW 393
Score = 41 (19.5 bits), Expect = 5.4e-17, Sum P(2) = 5.4e-17
Identities = 11/39 (28%), Positives = 16/39 (41%)
Query: 97 PFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVP 135
P P ++V +A V + EVY WG + P
Sbjct: 325 PTKRPRSSTVTEAPIA----VVTSRTSEVYVWGGGKSTP 359
>UNIPROTKB|E1BRZ2 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0072372
"primary cilium" evidence=IEA] InterPro:IPR000719
InterPro:IPR002290 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372 PRINTS:PR00633
PROSITE:PS50012 GeneTree:ENSGT00700000104137 OMA:EREVFAW
EMBL:AADN02025864 IPI:IPI00574044 ProteinModelPortal:E1BRZ2
Ensembl:ENSGALT00000006340 Uniprot:E1BRZ2
Length = 689
Score = 230 (86.0 bits), Expect = 8.6e-17, Sum P(2) = 8.6e-17
Identities = 50/146 (34%), Positives = 83/146 (56%)
Query: 284 GKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQV 343
G++G + +K ++CG +A +TD G ++TFG G G GHG+ D +P +L+ ++
Sbjct: 393 GQSGVT-IKHVSCGDLFTACLTDRGIIMTFGSGSNGCLGHGNFTDVSQPKIVEALLGYEM 451
Query: 344 EQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCG 403
Q+A G H + +S E V+ +G G+LG G + N P+ + P E + +V+ CG
Sbjct: 452 VQVACGASHVLAVSNEREVFAWGRGDNGRLGLGTLECHNSPQQVAVPP-EHEAQRVI-CG 509
Query: 404 ARHSAVLTEDGQVLSWGWNKYGQLGL 429
S VLT + Q+L+ G N+ +LGL
Sbjct: 510 IDSSMVLTVNNQILACGSNRCNKLGL 535
Score = 162 (62.1 bits), Expect = 8.8e-12, Sum P(2) = 8.8e-12
Identities = 38/115 (33%), Positives = 60/115 (52%)
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
G H+ ++ G+ Y FG NQ GQLGT + VP L+ L + + VV+CG +
Sbjct: 575 GTAHSAAVTASGQCYTFGSNQHGQLGTNSCRNSRVPHLVVG--LRAMKVTVVACGDAFTV 632
Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI---HGFLPRNIACGWWHTLL 460
+ DG+V +WG G+LG D + +P V + H ++ ++AC +TLL
Sbjct: 633 AIGADGEVCTWGKGARGRLGRKDE-ETGMPRPVQLEETHPYVVTSVACCHGNTLL 686
Score = 141 (54.7 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 42/175 (24%), Positives = 81/175 (46%)
Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWH 352
++ACG H V++ + +G G G+ G G+ P + + + +++ G+
Sbjct: 453 QVACGASHVLAVSNEREVFAWGRGDNGRLGLGTLECHNSPQQVAVPPEHEAQRVICGIDS 512
Query: 353 TVCISVEGRVYVFGGNQFGQLGTG-VDQAENV-PK--LLETPILESKRA-----KVVSC- 402
++ ++V ++ G N+ +LG + AE P+ + E + ++ + V C
Sbjct: 513 SMVLTVNNQILACGSNRCNKLGLDRISSAEEPSPEDQVEEATVFTCAQSAPLNQEPVVCA 572
Query: 403 --GARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACG 454
G HSA +T GQ ++G N++GQLG + +P LV + +ACG
Sbjct: 573 DIGTAHSAAVTASGQCYTFGSNQHGQLGTNSCRNSRVPHLVVGLRAMKVTVVACG 627
Score = 116 (45.9 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 37/130 (28%), Positives = 59/130 (45%)
Query: 275 VRQGSVNSSGKAGRSYVKEIAC---GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
V + +V + ++ + + C G HSA VT +G TFG +GQ G S +
Sbjct: 550 VEEATVFTCAQSAPLNQEPVVCADIGTAHSAAVTASGQCYTFGSNQHGQLGTNSCRNSRV 609
Query: 332 PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
P L ++V +A G TV I +G V +G G+LG D+ +P+ ++
Sbjct: 610 PHLVVGLRAMKVTVVACGDAFTVAIGADGEVCTWGKGARGRLGRK-DEETGMPRPVQ--- 665
Query: 392 LESKRAKVVS 401
LE VV+
Sbjct: 666 LEETHPYVVT 675
Score = 76 (31.8 bits), Expect = 8.8e-12, Sum P(2) = 8.8e-12
Identities = 28/106 (26%), Positives = 46/106 (43%)
Query: 28 LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDE--GQ 83
LPG + + P +R G S + CG F ++ G ++T+GS + G
Sbjct: 375 LPGATEQLQP---QFVSRFLEGQSGVTIKHVSCGDLFTACLTDRGIIMTFGSGSNGCLGH 431
Query: 84 SYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
T + E L E +V+ A G +H ++V+ EV+ WG
Sbjct: 432 GNFTDVSQPKIVEAL-LGYE--MVQVACGASHVLAVSNEREVFAWG 474
Score = 58 (25.5 bits), Expect = 6.4e-10, Sum P(2) = 6.4e-10
Identities = 16/75 (21%), Positives = 30/75 (40%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G LA S ++ WG D+ G+ L + + +P+ +P E + G +
Sbjct: 457 GASHVLAVSNEREVFAWGRGDN-GRLGLGTLECHNSPQQVAVPPEHEAQRVICGIDSSMV 515
Query: 119 VTEAGEVYTWGWREC 133
+T ++ G C
Sbjct: 516 LTVNNQILACGSNRC 530
Score = 50 (22.7 bits), Expect = 8.6e-17, Sum P(2) = 8.6e-17
Identities = 14/45 (31%), Positives = 20/45 (44%)
Query: 84 SYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTW 128
S T G TP P+ VV+ +AG VT++G + W
Sbjct: 319 SIYTWGSGITTPLRLPM-LNTEVVQVSAGRTQKAGVTKSGRLIMW 362
Score = 44 (20.5 bits), Expect = 3.6e-16, Sum P(2) = 3.6e-16
Identities = 17/55 (30%), Positives = 22/55 (40%)
Query: 125 VYTWGWRECVP------SAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
+YTWG P + +V + SAG QK K L +APP G
Sbjct: 320 IYTWGSGITTPLRLPMLNTEVVQV--SAGRTQKAGVTKSGRLIMWEAPPMGTAGG 372
Score = 40 (19.1 bits), Expect = 3.5e-09, Sum P(3) = 3.5e-09
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSD 229
P +V G ++ +VA G H L +S+
Sbjct: 440 PKIVEALLGYEMVQVACGASHVLAVSN 466
>UNIPROTKB|E2R5W9 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 OMA:ERPGAWF GeneTree:ENSGT00700000104312
EMBL:AAEX03002330 EMBL:AAEX03002329 Ensembl:ENSCAFT00000035362
Uniprot:E2R5W9
Length = 313
Score = 178 (67.7 bits), Expect = 4.2e-11, P = 4.2e-11
Identities = 30/82 (36%), Positives = 51/82 (62%)
Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW 351
+ + G H+ ++ +AG + ++G G +GQ GHGS + P +L + V ++AAG W
Sbjct: 98 RRLELGAEHALLLDEAGQVFSWGQGRHGQLGHGSLEAEPEPRLLEALQGLPVAEVAAGGW 157
Query: 352 HTVCISVEGRVYVFGGNQFGQL 373
H+VC+S G +Y++G N+ GQL
Sbjct: 158 HSVCVSETGDIYIWGWNESGQL 179
Score = 169 (64.5 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 59/175 (33%), Positives = 83/175 (47%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
V E+A GG HS V++ G + +GW GQ S S A I E A+GL
Sbjct: 149 VAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPSR------SLAEDTKTIPRE--ASGL 200
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
E R G + G + + P LL+ P L + K SCG+RH+AV+
Sbjct: 201 NED---GFEVRRTAKGED--GAPAPFI-AIQPFPALLDLP-LGADVVKA-SCGSRHTAVV 252
Query: 411 TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP--IHGFLP-RNIACGWWHTLLLA 462
T G++ +WGW KYGQLG D+ + P V + L R ++CG W+T + A
Sbjct: 253 TGTGELYTWGWGKYGQLGHKDTTSLDRPCRVEYFVDKQLQVRAVSCGPWNTYVYA 307
Score = 156 (60.0 bits), Expect = 8.6e-17, Sum P(2) = 8.6e-17
Identities = 33/75 (44%), Positives = 42/75 (56%)
Query: 287 GRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMD--IQVE 344
G VK +CG RH+AVVT G L T+GWG YGQ GH T RP +D +QV
Sbjct: 236 GADVVKA-SCGSRHTAVVTGTGELYTWGWGKYGQLGHKDTTSLDRPCRVEYFVDKQLQVR 294
Query: 345 QIAAGLWHTVCISVE 359
++ G W+T +VE
Sbjct: 295 AVSCGPWNTYVYAVE 309
Score = 131 (51.2 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 28/73 (38%), Positives = 41/73 (56%)
Query: 396 RAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACG 454
RA+ + GA H+ +L E GQV SWG ++GQLG G P L+ + G +A G
Sbjct: 96 RARRLELGAEHALLLDEAGQVFSWGQGRHGQLGHGSLEAEPEPRLLEALQGLPVAEVAAG 155
Query: 455 WWHTLLLAETTQI 467
WH++ ++ET I
Sbjct: 156 GWHSVCVSETGDI 168
Score = 118 (46.6 bits), Expect = 8.6e-17, Sum P(2) = 8.6e-17
Identities = 32/90 (35%), Positives = 42/90 (46%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS--VVKAAAGWAHC 116
G AL E+G++ +WG GQ L G PEP L V + AAG H
Sbjct: 103 GAEHALLLDEAGQVFSWGQGR-HGQ--LGHGSLEAEPEPRLLEALQGLPVAEVAAGGWHS 159
Query: 117 VSVTEAGEVYTWGWRE----CVPSAKVTRD 142
V V+E G++Y WGW E +PS + D
Sbjct: 160 VCVSETGDIYIWGWNESGQLALPSRSLAED 189
Score = 62 (26.9 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 28/108 (25%), Positives = 45/108 (41%)
Query: 25 WGYLPGTSPEKSPILSPIPARLCG-GDSWKDVCGGGCGFALATSESGK--LITWGSADDE 81
+G PG+ + +LSP P + G G + V AL T E L+ G
Sbjct: 17 FGQAPGSGRGRQ-VLSPEPLQTPGSGADVRRVSASWSYTALVTRERPPPALLRPGPRVPG 75
Query: 82 GQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
++ + + P P L E + G H + + EAG+V++WG
Sbjct: 76 AKAPQPALR---PPAPRALAPELRARRLELGAEHALLLDEAGQVFSWG 120
>UNIPROTKB|P23800 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:10036 "Mesocricetus auratus" [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0007059
"chromosome segregation" evidence=ISS] [GO:0031492 "nucleosomal DNA
binding" evidence=ISS] [GO:0051225 "spindle assembly" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0007059 GO:GO:0051301 GO:GO:0007067 GO:GO:0051225
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0031492 HOVERGEN:HBG017712 EMBL:M33579 PIR:A34726
ProteinModelPortal:P23800 SMR:P23800 Uniprot:P23800
Length = 421
Score = 231 (86.4 bits), Expect = 9.7e-17, P = 9.7e-17
Identities = 103/406 (25%), Positives = 165/406 (40%)
Query: 67 SESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVY 126
+E G ++T G D GQ L E +P +P VV+A AG H V + ++G+VY
Sbjct: 32 TEPGLVLTLGQGD-VGQLGLGESVL-ERKKPALVPLLQDVVQAEAGGMHTVCLNQSGQVY 89
Query: 127 TWGWRECVPSAKVTRDFGSAGS-FQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSA 185
++G C + RD GS Q + A S A E + S
Sbjct: 90 SFG---CNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGSF 146
Query: 186 REESENPASGD-EFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMXXXXXXXXXXXXXX 244
R+ N G E S V + + + KVA+G H ++L+
Sbjct: 147 RDN--NGVIGLLEPMKKSMVPVQVQLDMPVVKVASGNDHLVMLT---TDGDLYTLGCGEQ 201
Query: 245 XXXSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVV 304
R+ P L G +R L+ + + S G GR ++ CG + +
Sbjct: 202 GQLGRV-----PELF-ANRGGRQGLERLLVPKCVLLKSRGSRGRVRFQDAFCGAYLTFAI 255
Query: 305 TDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQI--AAGLWHTVCISVEGRV 362
+ G + FG Y Q G T P +S + + + G HT+C+ EG+
Sbjct: 256 SREGHVYGFGLSNYHQLGTPGTASCFIPQNLTSFKNSTKSWVGFSGGQHHTICMDSEGKA 315
Query: 363 YVFGGNQFGQLGTGVDQAE-NVPKLLET-PILESKRAKVVSCGARHSAVLTEDGQVLSWG 420
Y G ++G+LG G E ++P L+ P++ S V+CGA +++DG+V +WG
Sbjct: 316 YSLGRAEYGRLGLGEGAEEKSIPTLISRLPVVSS-----VACGASVGYAVSKDGRVFAWG 370
Query: 421 WNKYGQLGLGDSIDRNIPSLVP---IHGFLPRNIACGWWHTLLLAE 463
QLG G D P + + + ++ G HT+LL +
Sbjct: 371 MGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLTVSSGGQHTVLLVK 416
Score = 206 (77.6 bits), Expect = 7.3e-14, P = 7.3e-14
Identities = 63/170 (37%), Positives = 93/170 (54%)
Query: 300 HSAVVTDAGALLTFGWGLYGQCGHG-STNDQLRPSYASSLMDIQVEQIAAGLWHTVCISV 358
H + T+ G +LT G G GQ G G S ++ +P+ L D+ V+ A G+ HTVC++
Sbjct: 27 HRSHKTEPGLVLTLGQGDVGQLGLGESVLERKKPALVPLLQDV-VQAEAGGM-HTVCLNQ 84
Query: 359 EGRVYVFGGNQFGQLG--TGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQV 416
G+VY FG N G LG T V+ +E VP +E L+ K +V S G H+A LTEDG+V
Sbjct: 85 SGQVYSFGCNDEGALGRDTSVEGSEMVPGKVE---LQEKVVQV-SAGDSHTAALTEDGRV 140
Query: 417 LSWGW--NKYGQLGLGDSIDRNIPSLVPIHGFLPR---NIACGWWHTLLL 461
WG + G +GL + + + S+VP+ L +A G H ++L
Sbjct: 141 FLWGSFRDNNGVIGLLEPMKK---SMVPVQVQLDMPVVKVASGNDHLVML 187
Score = 124 (48.7 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 37/120 (30%), Positives = 59/120 (49%)
Query: 297 GGRHSAVVTDA-GALLTFGWGLYGQCGHGS-TNDQLRPSYASSLMDIQVEQIAAGLWHTV 354
GG+H + D+ G + G YG+ G G ++ P+ S L V +A G
Sbjct: 301 GGQHHTICMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLP--VVSSVACGASVGY 358
Query: 355 CISVEGRVYVFG-GNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
+S +GRV+ +G G + QLGTG D+ P + LE++ VS G +H+ +L +D
Sbjct: 359 AVSKDGRVFAWGMGTNY-QLGTGQDEDAWSPVEMTGKQLENRVVLTVSSGGQHTVLLVKD 417
Score = 90 (36.7 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 28/93 (30%), Positives = 42/93 (45%)
Query: 59 GCGFALATSESGKLITWGS-ADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
G A +E G++ WGS D+ G L ++ P + + VVK A+G H V
Sbjct: 127 GDSHTAALTEDGRVFLWGSFRDNNGVIGLLEPMK-KSMVPVQVQLDMPVVKVASGNDHLV 185
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQ 150
+T G++YT G E +V F + G Q
Sbjct: 186 MLTTDGDLYTLGCGEQGQLGRVPELFANRGGRQ 218
Score = 89 (36.4 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 21/72 (29%), Positives = 38/72 (52%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG + ++SG++ ++G +DEG + G P + + VV+ +AG +H
Sbjct: 75 GGM-HTVCLNQSGQVYSFG-CNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTA 132
Query: 118 SVTEAGEVYTWG 129
++TE G V+ WG
Sbjct: 133 ALTEDGRVFLWG 144
>UNIPROTKB|P18754 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=IDA]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0007088
"regulation of mitosis" evidence=IDA] [GO:0000082 "G1/S transition
of mitotic cell cycle" evidence=IMP] [GO:0007090 "regulation of S
phase of mitotic cell cycle" evidence=IMP] [GO:0042393 "histone
binding" evidence=IDA] [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000794 "condensed nuclear chromosome" evidence=IDA]
[GO:0007052 "mitotic spindle organization" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0031492 "nucleosomal DNA binding" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007059
"chromosome segregation" evidence=IMP] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0016032 "viral reproduction" evidence=TAS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 Reactome:REACT_116125 GO:GO:0007088 GO:GO:0007059
GO:GO:0005654 GO:GO:0016032 GO:GO:0051301 GO:GO:0007067
GO:GO:0007052 GO:GO:0051225 GO:GO:0000082 GO:GO:0031965
GO:GO:0000790 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0000794 GO:GO:0042393 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GO:GO:0007090 GO:GO:0031492 PDB:1I2M PDBsum:1I2M KO:K11493
EMBL:X12654 EMBL:X06130 EMBL:D00591 EMBL:AF498924 EMBL:BC007300
EMBL:BC010067 EMBL:BC036903 EMBL:BC069198 EMBL:S75708
IPI:IPI00001661 IPI:IPI00747309 PIR:A26691 RefSeq:NP_001041659.1
RefSeq:NP_001041660.1 RefSeq:NP_001041664.1 RefSeq:NP_001260.1
UniGene:Hs.469723 PDB:1A12 PDBsum:1A12 ProteinModelPortal:P18754
SMR:P18754 DIP:DIP-35416N IntAct:P18754 MINT:MINT-240062
STRING:P18754 PhosphoSite:P18754 DMDM:132170 PaxDb:P18754
PRIDE:P18754 DNASU:1104 Ensembl:ENST00000373831
Ensembl:ENST00000373832 Ensembl:ENST00000373833
Ensembl:ENST00000398958 GeneID:1104 KEGG:hsa:1104 UCSC:uc001bqa.2
UCSC:uc001bqf.2 CTD:1104 GeneCards:GC01P028834 HGNC:HGNC:1913
HPA:CAB015413 HPA:HPA027573 HPA:HPA027574 MIM:179710
neXtProt:NX_P18754 PharmGKB:PA26449 HOGENOM:HOG000234341
HOVERGEN:HBG017712 OMA:RETTEEG PhylomeDB:P18754
EvolutionaryTrace:P18754 GenomeRNAi:1104 NextBio:4572
ArrayExpress:P18754 Bgee:P18754 CleanEx:HS_RCC1
Genevestigator:P18754 GermOnline:ENSG00000180198 Uniprot:P18754
Length = 421
Score = 231 (86.4 bits), Expect = 9.7e-17, P = 9.7e-17
Identities = 103/408 (25%), Positives = 165/408 (40%)
Query: 66 TSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
++E G ++T G D GQ L G++ E +P + VV+A AG H V ++++G+
Sbjct: 31 STEPGLVLTLGQGD-VGQ--LGLGENVMERKKPALVSIPEDVVQAEAGGMHTVCLSKSGQ 87
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK-QSALPTEQAPPSDKRAGEEVVKRRKTS 183
VY++G C + RD GS + GK + Q D R
Sbjct: 88 VYSFG---CNDEGALGRDTSVEGS--EMVPGKVELQEKVVQVSAGDSHTAALTDDGRVFL 142
Query: 184 SAREESENPASGD-EFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMXXXXXXXXXXXX 242
N G E S V + V + KVA+G H ++L+
Sbjct: 143 WGSFRDNNGVIGLLEPMKKSMVPVQVQLDVPVVKVASGNDHLVMLT---ADGDLYTLGCG 199
Query: 243 XXXXXSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSA 302
R+ P L G +R L+ + + S G G ++ CG +
Sbjct: 200 EQGQLGRV-----PELF-ANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTF 253
Query: 303 VVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQI--AAGLWHTVCISVEG 360
++ G + FG Y Q G T P +S + + + G HTVC+ EG
Sbjct: 254 AISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEG 313
Query: 361 RVYVFGGNQFGQLGTGVDQAE-NVPKLLET-PILESKRAKVVSCGARHSAVLTEDGQVLS 418
+ Y G ++G+LG G E ++P L+ P + S V+CGA +T+DG+V +
Sbjct: 314 KAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAVSS-----VACGASVGYAVTKDGRVFA 368
Query: 419 WGWNKYGQLGLGDSIDRNIPSLV---PIHGFLPRNIACGWWHTLLLAE 463
WG QLG G D P + + + +++ G HT+LL +
Sbjct: 369 WGMGTNYQLGTGQDEDAWSPVEMMGKQLENRVVLSVSSGGQHTVLLVK 416
Score = 199 (75.1 bits), Expect = 4.6e-13, P = 4.6e-13
Identities = 57/149 (38%), Positives = 85/149 (57%)
Query: 300 HSAVVTDAGALLTFGWGLYGQCGHG-STNDQLRPSYASSLMDIQVEQIAAGLWHTVCISV 358
H + T+ G +LT G G GQ G G + ++ +P+ S D+ V+ A G+ HTVC+S
Sbjct: 27 HRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDV-VQAEAGGM-HTVCLSK 84
Query: 359 EGRVYVFGGNQFGQLG--TGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQV 416
G+VY FG N G LG T V+ +E VP +E L+ K +V S G H+A LT+DG+V
Sbjct: 85 SGQVYSFGCNDEGALGRDTSVEGSEMVPGKVE---LQEKVVQV-SAGDSHTAALTDDGRV 140
Query: 417 LSWGW--NKYGQLGLGDSIDRNIPSLVPI 443
WG + G +GL + + + S+VP+
Sbjct: 141 FLWGSFRDNNGVIGLLEPMKK---SMVPV 166
Score = 120 (47.3 bits), Expect = 5.4e-09, Sum P(2) = 5.4e-09
Identities = 37/120 (30%), Positives = 59/120 (49%)
Query: 297 GGRHSAVVTDA-GALLTFGWGLYGQCGHGS-TNDQLRPSYASSLMDIQVEQIAAGLWHTV 354
GG+H V D+ G + G YG+ G G ++ P+ S L V +A G
Sbjct: 301 GGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLP--AVSSVACGASVGY 358
Query: 355 CISVEGRVYVFG-GNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
++ +GRV+ +G G + QLGTG D+ P + LE++ VS G +H+ +L +D
Sbjct: 359 AVTKDGRVFAWGMGTNY-QLGTGQDEDAWSPVEMMGKQLENRVVLSVSSGGQHTVLLVKD 417
Score = 88 (36.0 bits), Expect = 5.4e-09, Sum P(2) = 5.4e-09
Identities = 27/93 (29%), Positives = 42/93 (45%)
Query: 59 GCGFALATSESGKLITWGS-ADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
G A ++ G++ WGS D+ G L ++ P + + VVK A+G H V
Sbjct: 127 GDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMK-KSMVPVQVQLDVPVVKVASGNDHLV 185
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQ 150
+T G++YT G E +V F + G Q
Sbjct: 186 MLTADGDLYTLGCGEQGQLGRVPELFANRGGRQ 218
>UNIPROTKB|E2QYP0 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] InterPro:IPR000719
InterPro:IPR002290 InterPro:IPR008271 InterPro:IPR011009
Pfam:PF00069 PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104074 CTD:91754 OMA:GCDGTFL
EMBL:AAEX03005855 RefSeq:XP_547912.3 Ensembl:ENSCAFT00000026967
GeneID:490790 KEGG:cfa:490790 NextBio:20863745 Uniprot:E2QYP0
Length = 976
Score = 241 (89.9 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 63/192 (32%), Positives = 97/192 (50%)
Query: 285 KAGRSYVKEIACGGRHSAVVTDAGALLTF-----GWGLYGQCGHGSTNDQLRPSYASSLM 339
K+G S +++ G H AVVT L T+ G L+GQ GHG +P + L
Sbjct: 366 KSGCS-ARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQ 424
Query: 340 DIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILE---SKR 396
+ Q++ G TVC++ EG++Y FG + +G +G VD+ P++LE L +
Sbjct: 425 GKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMG--VDKVAG-PEVLEPMQLNFFLNNP 481
Query: 397 AKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI-HGFLPRNIACGW 455
+ VSCG H VLT + +V SWG +YG+LGL D P V + + + CG
Sbjct: 482 VEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGC 541
Query: 456 WHTLLLAETTQI 467
T LL ++ ++
Sbjct: 542 DGTFLLTQSGKV 553
Score = 164 (62.8 bits), Expect = 8.4e-12, Sum P(2) = 8.4e-12
Identities = 58/192 (30%), Positives = 85/192 (44%)
Query: 294 IACGGRHSAVVTDAGALLTFGWGLYG-----QCGHGSTNDQLR---P---SY--ASSLMD 340
+ CG + ++T +G +L G + QC G N + P S+ A L
Sbjct: 537 VQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEIPYTTSFTLAKQLSF 596
Query: 341 IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVV 400
++ IA G HT I GR+ FG N+ GQLG G + LL P L K+ V
Sbjct: 597 YKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGP-LGGKQVIRV 655
Query: 401 SCGARHSAVLTEDGQVLSWGWNKYGQLGL-------GDSIDRNIPSLVPIHGFLPR--NI 451
SCG + T+D + +WG G+L + G I + P PI G L ++
Sbjct: 656 SCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPR--PIFGSLHHVPDL 713
Query: 452 ACGWWHTLLLAE 463
+C WHT+L+ E
Sbjct: 714 SCRGWHTILIVE 725
Score = 162 (62.1 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 49/190 (25%), Positives = 89/190 (46%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
V++++CG H V+T + ++G G YG+ G S D P + + + G
Sbjct: 482 VEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGC 541
Query: 351 WHTVCISVEGRVYVFGGNQFGQLG-----TGVDQAE---NVPKLLETPI---LESKRAKV 399
T ++ G+V G N+F +LG +G+ E +P + L + +
Sbjct: 542 DGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEIPYTTSFTLAKQLSFYKIRT 601
Query: 400 VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV--PIHGFLPRNIACGWWH 457
++ G H+A + E G++L++G NK GQLG+G+ R +L+ P+ G ++CG
Sbjct: 602 IAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEF 661
Query: 458 TLLLAETTQI 467
T+ + I
Sbjct: 662 TIAATDDNHI 671
Score = 78 (32.5 bits), Expect = 8.4e-12, Sum P(2) = 8.4e-12
Identities = 32/114 (28%), Positives = 49/114 (42%)
Query: 22 VYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITW----GS 77
VY+WG T P+K ++ G S + VC G FA+ T E +L TW G
Sbjct: 349 VYVWGGGKST-PQKLDVIK-------SGCSARQVCAGNTHFAVVTVEK-ELYTWVNMQGG 399
Query: 78 ADDEGQSYLTSGKHGETPEPFPLPT-EASVVK-AAAGWAHCVSVTEAGEVYTWG 129
GQ L G +P + + ++ + G V VT+ G++Y +G
Sbjct: 400 TKLHGQ--LGHGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFG 451
Score = 68 (29.0 bits), Expect = 9.0e-11, Sum P(2) = 9.0e-11
Identities = 24/77 (31%), Positives = 34/77 (44%)
Query: 60 CG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP--TEASVVKAAAGWAH 115
CG F + ++ G+L +GS D G + E EP L V + + G H
Sbjct: 433 CGDDFTVCVTDEGQLYAFGS-DYYGCMGVDKVAGPEVLEPMQLNFFLNNPVEQVSCGDNH 491
Query: 116 CVSVTEAGEVYTWGWRE 132
V +T EVY+WG E
Sbjct: 492 VVVLTRNKEVYSWGCGE 508
Score = 55 (24.4 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 17/75 (22%), Positives = 33/75 (44%)
Query: 60 CG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
CG + + + ++ +WG + G+ L S + TP+ +P +V G
Sbjct: 487 CGDNHVVVLTRNKEVYSWGCGE-YGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTF 545
Query: 118 SVTEAGEVYTWGWRE 132
+T++G+V G E
Sbjct: 546 LLTQSGKVLACGLNE 560
Score = 52 (23.4 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 19/67 (28%), Positives = 28/67 (41%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP-LPTEASVVKAAAGWAHCVSVTE 121
A+ TS + ++ WG GK TP+ + + S + AG H VT
Sbjct: 340 AVVTSRTSEVYVWGG-----------GK--STPQKLDVIKSGCSARQVCAGNTHFAVVTV 386
Query: 122 AGEVYTW 128
E+YTW
Sbjct: 387 EKELYTW 393
Score = 41 (19.5 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 11/39 (28%), Positives = 16/39 (41%)
Query: 97 PFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVP 135
P P ++V +A V + EVY WG + P
Sbjct: 325 PTKRPRSSTVTEAPIA----VVTSRTSEVYVWGGGKSTP 359
>UNIPROTKB|F1MM88 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS50012 GeneTree:ENSGT00700000104074 OMA:GCDGTFL
EMBL:DAAA02029619 IPI:IPI00714098 Ensembl:ENSBTAT00000022098
Uniprot:F1MM88
Length = 994
Score = 241 (89.9 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 59/189 (31%), Positives = 92/189 (48%)
Query: 285 KAGRSYVKEIACGGRHSAVVTDAGALLTF-----GWGLYGQCGHGSTNDQLRPSYASSLM 339
K+G S +++ G H AVVT L T+ G L+GQ GHG +P + L
Sbjct: 383 KSGCS-ARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQ 441
Query: 340 DIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKV 399
+ Q++ G TVC++ EG++Y FG + +G +G V + ++ S +
Sbjct: 442 GKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGAEVLEPMQLDFFLSNPVEQ 501
Query: 400 VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI-HGFLPRNIACGWWHT 458
VSCG H VLT + +V SWG +YG+LGL D P V + + + CG T
Sbjct: 502 VSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGT 561
Query: 459 LLLAETTQI 467
LL ++ ++
Sbjct: 562 FLLTQSGKV 570
Score = 165 (63.1 bits), Expect = 6.8e-12, Sum P(2) = 6.8e-12
Identities = 51/190 (26%), Positives = 89/190 (46%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
V++++CG H V+T + ++G G YG+ G S D P + + + G
Sbjct: 499 VEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGC 558
Query: 351 WHTVCISVEGRVYVFGGNQFGQLG-----TGVDQAE---NVPKLLETPI---LESKRAKV 399
T ++ G+V G N+F +LG +G+ E VP + L + +
Sbjct: 559 DGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRT 618
Query: 400 VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV--PIHGFLPRNIACGWWH 457
++ G H+A L E G++L++G NK GQLG+G+ R +L+ P+ G ++CG
Sbjct: 619 IAPGKTHTAALDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEF 678
Query: 458 TLLLAETTQI 467
T+ + I
Sbjct: 679 TIAATDDNHI 688
Score = 155 (59.6 bits), Expect = 8.6e-11, Sum P(2) = 8.6e-11
Identities = 56/192 (29%), Positives = 85/192 (44%)
Query: 294 IACGGRHSAVVTDAGALLTFGWGLYG-----QCGHGSTNDQLR---P---SY--ASSLMD 340
+ CG + ++T +G +L G + QC G N + P S+ A L
Sbjct: 554 VQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSF 613
Query: 341 IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVV 400
++ IA G HT + GR+ FG N+ GQLG G + LL P L K+ V
Sbjct: 614 YKIRTIAPGKTHTAALDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGP-LGGKQVIRV 672
Query: 401 SCGARHSAVLTEDGQVLSWGWNKYGQLGL-------GDSIDRNIPSLVPIHGFLPR--NI 451
SCG + T+D + +WG G+L + G I + P PI G L ++
Sbjct: 673 SCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPR--PIFGSLHHVPDL 730
Query: 452 ACGWWHTLLLAE 463
+C W+T+L+ E
Sbjct: 731 SCRGWNTILIVE 742
Score = 78 (32.5 bits), Expect = 6.8e-12, Sum P(2) = 6.8e-12
Identities = 32/114 (28%), Positives = 49/114 (42%)
Query: 22 VYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITW----GS 77
VY+WG T P+K ++ G S + VC G FA+ T E +L TW G
Sbjct: 366 VYVWGGGKST-PQKLDVIK-------SGCSARQVCAGNTHFAVVTVEK-ELYTWVNMQGG 416
Query: 78 ADDEGQSYLTSGKHGETPEPFPLPT-EASVVK-AAAGWAHCVSVTEAGEVYTWG 129
GQ L G +P + + ++ + G V VT+ G++Y +G
Sbjct: 417 TKLHGQ--LGHGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFG 468
Score = 73 (30.8 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 25/77 (32%), Positives = 35/77 (45%)
Query: 60 CG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS--VVKAAAGWAH 115
CG F + ++ G+L +GS D G + E EP L S V + + G H
Sbjct: 450 CGDDFTVCVTDEGQLYAFGS-DYYGCMGVDKVAGAEVLEPMQLDFFLSNPVEQVSCGDNH 508
Query: 116 CVSVTEAGEVYTWGWRE 132
V +T EVY+WG E
Sbjct: 509 VVVLTRNKEVYSWGCGE 525
Score = 55 (24.4 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 17/75 (22%), Positives = 33/75 (44%)
Query: 60 CG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
CG + + + ++ +WG + G+ L S + TP+ +P +V G
Sbjct: 504 CGDNHVVVLTRNKEVYSWGCGE-YGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTF 562
Query: 118 SVTEAGEVYTWGWRE 132
+T++G+V G E
Sbjct: 563 LLTQSGKVLACGLNE 577
Score = 52 (23.4 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 19/67 (28%), Positives = 28/67 (41%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP-LPTEASVVKAAAGWAHCVSVTE 121
A+ TS + ++ WG GK TP+ + + S + AG H VT
Sbjct: 357 AVVTSRTSEVYVWGG-----------GK--STPQKLDVIKSGCSARQVCAGNTHFAVVTV 403
Query: 122 AGEVYTW 128
E+YTW
Sbjct: 404 EKELYTW 410
Score = 41 (19.5 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 11/39 (28%), Positives = 16/39 (41%)
Query: 97 PFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVP 135
P P ++V +A V + EVY WG + P
Sbjct: 342 PTKRPRSSTVTEAPIA----VVTSRTSEVYVWGGGKSTP 376
>ZFIN|ZDB-GENE-081015-2 [details] [associations]
symbol:rpgrb "retinitis pigmentosa GTPase regulator
b" species:7955 "Danio rerio" [GO:0060287 "epithelial cilium
movement involved in determination of left/right asymmetry"
evidence=IMP] [GO:0060271 "cilium morphogenesis" evidence=IMP]
[GO:0010842 "retina layer formation" evidence=IMP] [GO:0060041
"retina development in camera-type eye" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] INTERPRO:IPR000408
Pfam:PF00415 ZFIN:ZDB-GENE-081015-2 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0010842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0060271 GO:GO:0060287
GeneTree:ENSGT00700000104160 EMBL:CR450831 IPI:IPI00798788
RefSeq:XP_685964.5 UniGene:Dr.100975 Ensembl:ENSDART00000088624
GeneID:557752 KEGG:dre:557752 CTD:557752 NextBio:20882140
Bgee:F1QM29 Uniprot:F1QM29
Length = 1413
Score = 239 (89.2 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 56/165 (33%), Positives = 87/165 (52%)
Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
I+CG H+A+VT+ G L FG +GQ G G+ +P+ +L +V+ A G HT
Sbjct: 41 ISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALKSERVKLTACGRTHT 100
Query: 354 VCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTED 413
+ + G +Y GGN GQLG G L+E + K+++ G+ SA LT+D
Sbjct: 101 LVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEF-FNKQGPIKMLAAGSNTSAALTQD 159
Query: 414 GQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHT 458
G++ WG N GQ+GLG + P V + G ++CG++H+
Sbjct: 160 GRLYMWGDNSEGQIGLGKESNALTPQEVSV-GKRVFWVSCGYYHS 203
Score = 238 (88.8 bits), Expect = 2.2e-16, Sum P(2) = 2.2e-16
Identities = 65/176 (36%), Positives = 97/176 (55%)
Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDI--QVEQIAAGLW 351
++CG HSA VT GAL TFG G+ G ST + DI +V Q+A G
Sbjct: 196 VSCGYYHSAFVTVDGALYTFGEKDSGKLGL-STEKLANHKVPQQVTDIPDRVVQVACGGG 254
Query: 352 HTVCISVEGRVYVFGGNQFGQLGTGVDQAEN-VPKLLETPILESKRAKVVSCGARHSAVL 410
HTV ++ E VY FG QFGQLG G E+ +P+++E R K +CG H+A++
Sbjct: 255 HTVALT-ENEVYSFGLGQFGQLGHGTFIFESRLPRVVEH--FRKGRVKHAACGENHTALI 311
Query: 411 TEDGQVLSWGWNKYGQLGLGDSIDRNI--PSLVP-IHGFLPRNIACGWWHTLLLAE 463
T++G + ++G ++G+LGLG+ N P+L P + ++ CG H L+LA+
Sbjct: 312 TDNGLLYTFGDGRHGKLGLGEENFTNQFKPTLCPRFLDYHVHSVTCGGCHMLVLAK 367
Score = 203 (76.5 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 60/178 (33%), Positives = 86/178 (48%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSY-ASSLMDIQ--VEQIA 347
VK ACG H+ V T G L G GQ G G ND R S+ + Q ++ +A
Sbjct: 90 VKLTACGRTHTLVFTSRGNLYACGGNNEGQLGLGDCND--RTSFHLVEFFNKQGPIKMLA 147
Query: 348 AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHS 407
AG + ++ +GR+Y++G N GQ+G G + P+ E + KR VSCG HS
Sbjct: 148 AGSNTSAALTQDGRLYMWGDNSEGQIGLGKESNALTPQ--EVSV--GKRVFWVSCGYYHS 203
Query: 408 AVLTEDGQVLSWGWNKYGQLGLGDS--IDRNIPSLVPIHGFLPRNIACGWWHTLLLAE 463
A +T DG + ++G G+LGL + +P V +ACG HT+ L E
Sbjct: 204 AFVTVDGALYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPDRVVQVACGGGHTVALTE 261
Score = 183 (69.5 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 47/138 (34%), Positives = 72/138 (52%)
Query: 304 VTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVY 363
+ ++GA+ TFG + N PS D+ + +I+ G HT ++ G+++
Sbjct: 9 IPESGAVFTFGKSKFAD------N---APSKFWLKNDVPL-RISCGDEHTALVTENGKLF 58
Query: 364 VFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNK 423
+FG N +GQLG G N P ++ L+S+R K+ +CG H+ V T G + + G N
Sbjct: 59 MFGSNNWGQLGLGTKTTVNKPTCVKA--LKSERVKLTACGRTHTLVFTSRGNLYACGGNN 116
Query: 424 YGQLGLGDSIDRNIPSLV 441
GQLGLGD DR LV
Sbjct: 117 EGQLGLGDCNDRTSFHLV 134
Score = 161 (61.7 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 40/123 (32%), Positives = 59/123 (47%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR-PSYASSLMDIQVEQIAAG 349
V ++ACGG H+ +T+ + +FG G +GQ GHG+ + R P +V+ A G
Sbjct: 246 VVQVACGGGHTVALTE-NEVYSFGLGQFGQLGHGTFIFESRLPRVVEHFRKGRVKHAACG 304
Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
HT I+ G +Y FG + G+LG G + N K P V+CG H V
Sbjct: 305 ENHTALITDNGLLYTFGDGRHGKLGLGEENFTNQFKPTLCPRFLDYHVHSVTCGGCHMLV 364
Query: 410 LTE 412
L +
Sbjct: 365 LAK 367
Score = 125 (49.1 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 27/75 (36%), Positives = 41/75 (54%)
Query: 285 KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN--DQLRPSYASSLMDIQ 342
+ GR VK ACG H+A++TD G L TFG G +G+ G G N +Q +P+ +D
Sbjct: 294 RKGR--VKHAACGENHTALITDNGLLYTFGDGRHGKLGLGEENFTNQFKPTLCPRFLDYH 351
Query: 343 VEQIAAGLWHTVCIS 357
V + G H + ++
Sbjct: 352 VHSVTCGGCHMLVLA 366
Score = 81 (33.6 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 22/74 (29%), Positives = 34/74 (45%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G + A ++ G+L WG + EGQ L GK P + V + G+ H
Sbjct: 149 GSNTSAALTQDGRLYMWGD-NSEGQIGL--GKESNALTPQEVSVGKRVFWVSCGYYHSAF 205
Query: 119 VTEAGEVYTWGWRE 132
VT G +YT+G ++
Sbjct: 206 VTVDGALYTFGEKD 219
Score = 71 (30.1 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 36/118 (30%), Positives = 55/118 (46%)
Query: 22 VYMWGYLP----GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF---ALATSESGKLIT 74
+YMWG G E + + P + G K V CG+ A T + G L T
Sbjct: 162 LYMWGDNSEGQIGLGKESNALT---PQEVSVG---KRVFWVSCGYYHSAFVTVD-GALYT 214
Query: 75 WGSADDEGQSYLTSGK--HGETPEPFP-LPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+G D G+ L++ K + + P+ +P VV+ A G H V++TE EVY++G
Sbjct: 215 FGEKDS-GKLGLSTEKLANHKVPQQVTDIPDR--VVQVACGGGHTVALTE-NEVYSFG 268
Score = 46 (21.3 bits), Expect = 2.2e-16, Sum P(2) = 2.2e-16
Identities = 27/108 (25%), Positives = 41/108 (37%)
Query: 25 WGYLP-GTSPEKSPILSPIPARLCGGDSWK-DVCGGGCGFALATSESGKLITWGSADDEG 82
WG L GT K+ + P + + K CG L + G L G ++EG
Sbjct: 65 WGQLGLGT---KTTVNKPTCVKALKSERVKLTACGRT--HTLVFTSRGNLYACGG-NNEG 118
Query: 83 QSYLTSGKHGETPEPFPLPTEASVVKA-AAGWAHCVSVTEAGEVYTWG 129
Q L + + +K AAG ++T+ G +Y WG
Sbjct: 119 QLGLGDCNDRTSFHLVEFFNKQGPIKMLAAGSNTSAALTQDGRLYMWG 166
Score = 45 (20.9 bits), Expect = 2.8e-16, Sum P(2) = 2.8e-16
Identities = 19/74 (25%), Positives = 30/74 (40%)
Query: 76 GSADDE---GQSYLTSGKH---GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
G +DE + T GK P F L + + + + G H VTE G+++ +G
Sbjct: 3 GETEDEIPESGAVFTFGKSKFADNAPSKFWLKNDVPL-RISCGDEHTALVTENGKLFMFG 61
Query: 130 ---WRECVPSAKVT 140
W + K T
Sbjct: 62 SNNWGQLGLGTKTT 75
Score = 45 (20.9 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSD 229
P VT P ++ +VA GG HT+ L++
Sbjct: 236 PQQVTDIPD-RVVQVACGGGHTVALTE 261
>MGI|MGI:2137600 [details] [associations]
symbol:Wbscr16 "Williams-Beuren syndrome chromosome region
16 homolog (human)" species:10090 "Mus musculus" [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=NAS]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0050790 "regulation
of catalytic activity" evidence=NAS] MGI:MGI:2137600
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GeneTree:ENSGT00700000104312 CTD:81554 HOGENOM:HOG000232125
HOVERGEN:HBG054246 OMA:MVTLAKS OrthoDB:EOG4F1X33 EMBL:AK017733
EMBL:BC024714 EMBL:BC055335 IPI:IPI00111460 RefSeq:NP_291050.1
UniGene:Mm.29508 ProteinModelPortal:Q9CYF5 SMR:Q9CYF5 STRING:Q9CYF5
PhosphoSite:Q9CYF5 PRIDE:Q9CYF5 Ensembl:ENSMUST00000076228
GeneID:94254 KEGG:mmu:94254 InParanoid:Q9CYF5 NextBio:352275
Bgee:Q9CYF5 Genevestigator:Q9CYF5 GermOnline:ENSMUSG00000061979
Uniprot:Q9CYF5
Length = 461
Score = 207 (77.9 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 53/155 (34%), Positives = 78/155 (50%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPS-YASSLMDIQVEQIAAG 349
V ++ CG HS +TD G + + GWG GQ G G N PS L + V Q+A
Sbjct: 229 VVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSTPSKLGGDLAGVTVVQVATY 288
Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGARHSA 408
+ +S +G V+ +G +++ QL + D + NVP+ L P + K V+CG A
Sbjct: 289 GDCCLALSADGGVFGWGNSEYLQLASVTDSTQVNVPRCL--PFSGVGKVKQVACGGTGCA 346
Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSI-DRNIPSLVP 442
VL +G V WG YG LG G + + IP ++P
Sbjct: 347 VLNAEGHVFVWG---YGILGKGPKLLETAIPEMIP 378
Score = 183 (69.5 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 53/170 (31%), Positives = 81/170 (47%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL-RPSYASSLM---DIQVEQI 346
V +++CG HS V+TD + + G +GQCG D++ S+ M D QV Q+
Sbjct: 173 VLQVSCGRAHSLVLTDREGVFSMGNNSHGQCGRKVVEDEVYSESHKVHRMQDFDGQVVQV 232
Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
G H++ ++ +G VY G GQ G G + P L + +V + G
Sbjct: 233 VCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSTPSKLGGDLAGVTVVQVATYGDCC 292
Query: 407 SAVLTEDGQVLSWGWNKYGQLG-LGDSIDRNIPSLVPIHGF-LPRNIACG 454
A L+ DG V WG ++Y QL + DS N+P +P G + +ACG
Sbjct: 293 LA-LSADGGVFGWGNSEYLQLASVTDSTQVNVPRCLPFSGVGKVKQVACG 341
Score = 159 (61.0 bits), Expect = 5.7e-11, Sum P(2) = 5.7e-11
Identities = 56/189 (29%), Positives = 88/189 (46%)
Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQLRPSYASSLMDI-Q 342
AG + V+ G A+ D G FGWG Y Q + + Q+ + +
Sbjct: 278 AGVTVVQVATYGDCCLALSADGGV---FGWGNSEYLQLASVTDSTQVNVPRCLPFSGVGK 334
Query: 343 VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAEN-VPKLLETPI--LESKRAKV 399
V+Q+A G ++ EG V+V+G +G LG G E +P+++ + L +V
Sbjct: 335 VKQVACGGTGCAVLNAEGHVFVWG---YGILGKGPKLLETAIPEMIPPTLFGLTEFNPEV 391
Query: 400 ----VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGW 455
+ CG H A LT G++ WG N G LG+G D+ P V + G P ++ACG
Sbjct: 392 QVSQIRCGLSHFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRVTMPGE-PVDVACGV 450
Query: 456 WHTLLLAET 464
H + LA++
Sbjct: 451 DHMVTLAKS 459
Score = 122 (48.0 bits), Expect = 0.00021, P = 0.00021
Identities = 32/102 (31%), Positives = 50/102 (49%)
Query: 340 DIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKV 399
+ +V Q++ G H++ ++ V+ G N GQ G V + E + + ++ +V
Sbjct: 170 ETKVLQVSCGRAHSLVLTDREGVFSMGNNSHGQCGRKVVEDEVYSESHKVHRMQDFDGQV 229
Query: 400 VS--CGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS 439
V CG HS LT+ G+V S GW GQ GLG + PS
Sbjct: 230 VQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSTPS 271
Score = 66 (28.3 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 31/115 (26%), Positives = 50/115 (43%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLIT--WGSA-DDEGQSYL 86
G P + + P+P RL D G GF L +S++ K +T WG + + Q
Sbjct: 86 GLRPRRR--IQPVPYRL-ELDHKISSAACGYGFTLLSSKT-KDVTKVWGMGLNKDSQLGF 141
Query: 87 TSGKHGET--------PEPFPLPT----EASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ +T P P PLP E V++ + G AH + +T+ V++ G
Sbjct: 142 HRSRKDKTRGYEYVLEPSPVPLPLDRPQETKVLQVSCGRAHSLVLTDREGVFSMG 196
Score = 66 (28.3 bits), Expect = 5.7e-11, Sum P(2) = 5.7e-11
Identities = 24/96 (25%), Positives = 41/96 (42%)
Query: 40 SPIPARLCGGDSWKDVCGGGCGFA---LATSESGKLITWGSADDE-GQSYLTSGKHGETP 95
SP+P L K V CG A + T G ++ + G+ + + E+
Sbjct: 159 SPVPLPLDRPQETK-VLQVSCGRAHSLVLTDREGVFSMGNNSHGQCGRKVVEDEVYSESH 217
Query: 96 EPFPLPT-EASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+ + + VV+ G H + +T+ GEVY+ GW
Sbjct: 218 KVHRMQDFDGQVVQVVCGQDHSLFLTDKGEVYSCGW 253
Score = 43 (20.2 bits), Expect = 4.1e-14, Sum P(2) = 4.1e-14
Identities = 7/17 (41%), Positives = 13/17 (76%)
Query: 213 KITKVAAGGRHTLILSD 229
K+ +V+ G H+L+L+D
Sbjct: 172 KVLQVSCGRAHSLVLTD 188
>UNIPROTKB|F1S2Q4 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS50012 GeneTree:ENSGT00700000104074 OMA:GCDGTFL
EMBL:CT737372 Ensembl:ENSSSCT00000002648 Uniprot:F1S2Q4
Length = 1004
Score = 241 (89.9 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 63/192 (32%), Positives = 97/192 (50%)
Query: 285 KAGRSYVKEIACGGRHSAVVTDAGALLTF-----GWGLYGQCGHGSTNDQLRPSYASSLM 339
K+G S +++ G H AVVT L T+ G L+GQ GHG +P + L
Sbjct: 385 KSGCS-ARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQ 443
Query: 340 DIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILE---SKR 396
+ Q++ G TVC++ EG++Y FG + +G +G VD+ P++LE L +
Sbjct: 444 GKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMG--VDKVAG-PEVLEPMQLNFFSNNP 500
Query: 397 AKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI-HGFLPRNIACGW 455
+ VSCG H VLT + +V SWG +YG+LGL D P V + + + CG
Sbjct: 501 VEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGC 560
Query: 456 WHTLLLAETTQI 467
T LL ++ ++
Sbjct: 561 DGTFLLTQSGKV 572
Score = 164 (62.8 bits), Expect = 9.0e-12, Sum P(2) = 9.0e-12
Identities = 51/190 (26%), Positives = 89/190 (46%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
V++++CG H V+T + ++G G YG+ G S D P + + + G
Sbjct: 501 VEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGC 560
Query: 351 WHTVCISVEGRVYVFGGNQFGQLG-----TGVDQAE---NVPKLLETPI---LESKRAKV 399
T ++ G+V G N+F +LG +G+ E VP + L + +
Sbjct: 561 DGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRT 620
Query: 400 VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV--PIHGFLPRNIACGWWH 457
V+ G H+A + E G++L++G NK GQLG+G+ R +L+ P+ G ++CG
Sbjct: 621 VAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEF 680
Query: 458 TLLLAETTQI 467
T+ + I
Sbjct: 681 TIAATDDNHI 690
Score = 163 (62.4 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 57/192 (29%), Positives = 85/192 (44%)
Query: 294 IACGGRHSAVVTDAGALLTFGWGLYG-----QCGHGSTNDQLR---P---SY--ASSLMD 340
+ CG + ++T +G +L G + QC G N + P S+ A L
Sbjct: 556 VQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSF 615
Query: 341 IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVV 400
++ +A G HT I GR+ FG N+ GQLG G + LL P L K+ V
Sbjct: 616 YKIRTVAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGP-LGGKQVIRV 674
Query: 401 SCGARHSAVLTEDGQVLSWGWNKYGQLGL-------GDSIDRNIPSLVPIHGFLPR--NI 451
SCG + T+D + +WG G+L + G I + P PI G L ++
Sbjct: 675 SCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPR--PIFGSLHHVPDL 732
Query: 452 ACGWWHTLLLAE 463
+C WHT+L+ E
Sbjct: 733 SCRGWHTILIVE 744
Score = 78 (32.5 bits), Expect = 9.0e-12, Sum P(2) = 9.0e-12
Identities = 32/114 (28%), Positives = 49/114 (42%)
Query: 22 VYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITW----GS 77
VY+WG T P+K ++ G S + VC G FA+ T E +L TW G
Sbjct: 368 VYVWGGGKST-PQKLDVIK-------SGCSARQVCAGNTHFAVVTVEK-ELYTWVNMQGG 418
Query: 78 ADDEGQSYLTSGKHGETPEPFPLPT-EASVVK-AAAGWAHCVSVTEAGEVYTWG 129
GQ L G +P + + ++ + G V VT+ G++Y +G
Sbjct: 419 TKLHGQ--LGHGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFG 470
Score = 70 (29.7 bits), Expect = 7.8e-11, Sum P(2) = 7.8e-11
Identities = 24/77 (31%), Positives = 35/77 (45%)
Query: 60 CG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP--TEASVVKAAAGWAH 115
CG F + ++ G+L +GS D G + E EP L + V + + G H
Sbjct: 452 CGDDFTVCVTDEGQLYAFGS-DYYGCMGVDKVAGPEVLEPMQLNFFSNNPVEQVSCGDNH 510
Query: 116 CVSVTEAGEVYTWGWRE 132
V +T EVY+WG E
Sbjct: 511 VVVLTRNKEVYSWGCGE 527
Score = 58 (25.5 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 20/96 (20%), Positives = 40/96 (41%)
Query: 38 ILSPIPARLCGGDSWKDV-CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPE 96
+L P+ + + V CG + + + ++ +WG + G+ L S + TP+
Sbjct: 487 VLEPMQLNFFSNNPVEQVSCGDN--HVVVLTRNKEVYSWGCGE-YGRLGLDSEEDYYTPQ 543
Query: 97 PFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+P +V G +T++G+V G E
Sbjct: 544 KVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNE 579
Score = 52 (23.4 bits), Expect = 4.4e-09, Sum P(2) = 4.4e-09
Identities = 19/67 (28%), Positives = 28/67 (41%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP-LPTEASVVKAAAGWAHCVSVTE 121
A+ TS + ++ WG GK TP+ + + S + AG H VT
Sbjct: 359 AVVTSRTSEVYVWGG-----------GK--STPQKLDVIKSGCSARQVCAGNTHFAVVTV 405
Query: 122 AGEVYTW 128
E+YTW
Sbjct: 406 EKELYTW 412
Score = 39 (18.8 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 7/19 (36%), Positives = 9/19 (47%)
Query: 117 VSVTEAGEVYTWGWRECVP 135
V + EVY WG + P
Sbjct: 360 VVTSRTSEVYVWGGGKSTP 378
>WB|WBGene00017195 [details] [associations]
symbol:glo-4 species:6239 "Caenorhabditis elegans"
[GO:0019915 "lipid storage" evidence=IMP] [GO:0045202 "synapse"
evidence=IDA] [GO:0030424 "axon" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0030424 GO:GO:0045202 GO:GO:0019915
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104208 EMBL:FO081074
PIR:T28816 PIR:T28817 RefSeq:NP_505392.2 ProteinModelPortal:Q5DX34
SMR:Q5DX34 STRING:Q5DX34 PaxDb:Q5DX34 EnsemblMetazoa:F07C3.4
GeneID:179306 KEGG:cel:CELE_F07C3.4 UCSC:F07C3.4 CTD:179306
WormBase:F07C3.4 HOGENOM:HOG000021586 InParanoid:Q5DX34 OMA:MANHEDV
NextBio:904820 Uniprot:Q5DX34
Length = 1392
Score = 241 (89.9 bits), Expect = 4.2e-16, Sum P(3) = 4.2e-16
Identities = 56/136 (41%), Positives = 82/136 (60%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND--QLRPSYASSLMDIQVEQIAA 348
+++IACG HSA + G+L TFGWG++GQ GHG N+ QL P+ + L+ +V QIA
Sbjct: 829 IEKIACGQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVPTRVNGLI-CKVTQIAC 887
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE-TPI-LESKRAKVVSCGARH 406
G HTV ++ GRV V G +GQ+G VD +++ K+ TP+ L R + ++ H
Sbjct: 888 GRAHTVVLTDTGRVLVCGSGSYGQMG--VD--DDIKKVFAFTPLPLGPLRVRDIATHYYH 943
Query: 407 SAVLTEDGQVLSWGWN 422
S +TED +V WG N
Sbjct: 944 SICITEDNRVFEWGRN 959
Score = 218 (81.8 bits), Expect = 2.1e-13, Sum P(3) = 2.1e-13
Identities = 55/179 (30%), Positives = 92/179 (51%)
Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW 351
+ IACG H V++ +G L +G +GQCG G + +E+IA G +
Sbjct: 779 RAIACGAEHILVLSSSGQLSAWGGNRFGQCGVGHSFRIANLHQVDGDWPA-IEKIACGQF 837
Query: 352 HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKV--VSCGARHSAV 409
H+ I +G ++ FG +GQLG G N +L+ T + KV ++CG H+ V
Sbjct: 838 HSAFICSDGSLWTFGWGVWGQLGHGGRNNSN--QLVPTRV-NGLICKVTQIACGRAHTVV 894
Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNIP-SLVPIHGFLPRNIACGWWHTLLLAETTQI 467
LT+ G+VL G YGQ+G+ D I + + +P+ R+IA ++H++ + E ++
Sbjct: 895 LTDTGRVLVCGSGSYGQMGVDDDIKKVFAFTPLPLGPLRVRDIATHYYHSICITEDNRV 953
Score = 152 (58.6 bits), Expect = 7.2e-10, Sum P(3) = 7.2e-10
Identities = 30/84 (35%), Positives = 47/84 (55%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
+ +ACG HSA++T G L T+G GL Q GHG+ N+++ P + ++ G
Sbjct: 1024 IVSVACGLSHSALITSEGTLYTWGKGLDYQLGHGNKNERMEPHQVFEPNGAKWVNVSLGN 1083
Query: 351 WHTVCISVEGRVYVFGGNQFGQLG 374
HT+ + +G V+ +G N FGQ G
Sbjct: 1084 NHTIASTDDGSVFAWGKNDFGQCG 1107
Score = 143 (55.4 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 30/83 (36%), Positives = 49/83 (59%)
Query: 381 ENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSL 440
+++P++LE P R + ++CGA H VL+ GQ+ +WG N++GQ G+G S I +L
Sbjct: 765 QHLPRVLEYP---GGRPRAIACGAEHILVLSSSGQLSAWGGNRFGQCGVGHSF--RIANL 819
Query: 441 VPIHGFLP--RNIACGWWHTLLL 461
+ G P IACG +H+ +
Sbjct: 820 HQVDGDWPAIEKIACGQFHSAFI 842
Score = 125 (49.1 bits), Expect = 6.1e-07, Sum P(3) = 6.1e-07
Identities = 30/91 (32%), Positives = 44/91 (48%)
Query: 339 MDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAK 398
+D + +A GL H+ I+ EG +Y +G QLG G P + P +
Sbjct: 1020 LDGNIVSVACGLSHSALITSEGTLYTWGKGLDYQLGHGNKNERMEPHQVFEP--NGAKWV 1077
Query: 399 VVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
VS G H+ T+DG V +WG N +GQ G+
Sbjct: 1078 NVSLGNNHTIASTDDGSVFAWGKNDFGQCGV 1108
Score = 67 (28.6 bits), Expect = 7.2e-10, Sum P(3) = 7.2e-10
Identities = 28/107 (26%), Positives = 41/107 (38%)
Query: 28 LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSAD----DEGQ 83
LP +P+ L P GG CG L S SG+L WG G
Sbjct: 756 LPPPAPKPEQHL-PRVLEYPGGRPRAIACGAE--HILVLSSSGQLSAWGGNRFGQCGVGH 812
Query: 84 SYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
S+ + H + +P ++ K A G H + G ++T+GW
Sbjct: 813 SFRIANLH-QVDGDWP-----AIEKIACGQFHSAFICSDGSLWTFGW 853
Score = 63 (27.2 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 31/112 (27%), Positives = 48/112 (42%)
Query: 24 MWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFA--LATSESGKLITWGSADDE 81
+WG L S L +P R+ G K V CG A + +++G+++ GS
Sbjct: 855 VWGQLGHGGRNNSNQL--VPTRV-NGLICK-VTQIACGRAHTVVLTDTGRVLVCGSG--- 907
Query: 82 GQSYLTSGKHGETPEPF---PLPTEASVVK-AAAGWAHCVSVTEAGEVYTWG 129
SY G + + F PLP V+ A + H + +TE V+ WG
Sbjct: 908 --SYGQMGVDDDIKKVFAFTPLPLGPLRVRDIATHYYHSICITEDNRVFEWG 957
Score = 52 (23.4 bits), Expect = 7.2e-10, Sum P(3) = 7.2e-10
Identities = 8/17 (47%), Positives = 14/17 (82%)
Query: 213 KITKVAAGGRHTLILSD 229
K+T++A G HT++L+D
Sbjct: 881 KVTQIACGRAHTVVLTD 897
Score = 42 (19.8 bits), Expect = 4.2e-16, Sum P(3) = 4.2e-16
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 210 PGVKITKVAAGGRHTLILS 228
PG + +A G H L+LS
Sbjct: 774 PGGRPRAIACGAEHILVLS 792
Score = 39 (18.8 bits), Expect = 4.2e-16, Sum P(3) = 4.2e-16
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 57 GGGCGFALATSESGKLITWGS 77
G CG + +E +L+ WG+
Sbjct: 708 GNNCGATI--TEDDRLMIWGN 726
>UNIPROTKB|E1BIS5 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104312 CTD:81554 OMA:MVTLAKS
EMBL:DAAA02058190 IPI:IPI00705939 RefSeq:NP_001179275.1
UniGene:Bt.1520 Ensembl:ENSBTAT00000015608 GeneID:513273
KEGG:bta:513273 NextBio:20870790 Uniprot:E1BIS5
Length = 464
Score = 200 (75.5 bits), Expect = 4.3e-16, Sum P(2) = 4.3e-16
Identities = 50/155 (32%), Positives = 79/155 (50%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPS-YASSLMDIQVEQIAAG 349
V ++ACG HS +TD G + + GWG GQ G G N P+ L + V Q+A
Sbjct: 232 VVQVACGQDHSLFLTDQGEVYSCGWGADGQTGLGHYNITSTPTKLGGDLAGVNVVQVATY 291
Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGARHSA 408
+ +S +G ++ +G +++ QL + D + NVP+ L P + K +CG A
Sbjct: 292 GDCCLAVSADGGLFGWGNSEYLQLASVTDSTQVNVPRCL--PFSGVGQVKQAACGGTGCA 349
Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSI-DRNIPSLVP 442
VL +G V WG YG LG G ++ + +P ++P
Sbjct: 350 VLNGEGHVFVWG---YGILGKGPNLLETALPEMIP 381
Score = 183 (69.5 bits), Expect = 4.1e-14, Sum P(2) = 4.1e-14
Identities = 53/170 (31%), Positives = 81/170 (47%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL-RPSYASSLM---DIQVEQI 346
V +++CG HS V+TD + + G YGQCG +++ S+ M D QV Q+
Sbjct: 176 VLQVSCGRAHSLVLTDGEGVFSMGNNSYGQCGRKVVENEIYSESHRVHRMQDFDGQVVQV 235
Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
A G H++ ++ +G VY G GQ G G + P L + +V + G
Sbjct: 236 ACGQDHSLFLTDQGEVYSCGWGADGQTGLGHYNITSTPTKLGGDLAGVNVVQVATYGDCC 295
Query: 407 SAVLTEDGQVLSWGWNKYGQLG-LGDSIDRNIPSLVPIHGF-LPRNIACG 454
AV + DG + WG ++Y QL + DS N+P +P G + ACG
Sbjct: 296 LAV-SADGGLFGWGNSEYLQLASVTDSTQVNVPRCLPFSGVGQVKQAACG 344
Score = 157 (60.3 bits), Expect = 2.5e-11, Sum P(3) = 2.5e-11
Identities = 59/189 (31%), Positives = 86/189 (45%)
Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQLRPSYASSLMDI-Q 342
AG + V+ G AV D G FGWG Y Q + + Q+ + Q
Sbjct: 281 AGVNVVQVATYGDCCLAVSADGGL---FGWGNSEYLQLASVTDSTQVNVPRCLPFSGVGQ 337
Query: 343 VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAEN-VPKLLETPIL---ESKRAK 398
V+Q A G ++ EG V+V+G +G LG G + E +P+++ + E
Sbjct: 338 VKQAACGGTGCAVLNGEGHVFVWG---YGILGKGPNLLETALPEMIPPTLFGLSEFNPGV 394
Query: 399 VVS---CGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGW 455
VS CG H A LT G++ WG N G LG+G D+ P V + G P ++ACG
Sbjct: 395 QVSRIRCGLSHFAALTNRGELFVWGKNIRGCLGIGRLEDQYFPWRVTMPGE-PMDVACGV 453
Query: 456 WHTLLLAET 464
H + LA +
Sbjct: 454 DHMVTLARS 462
Score = 124 (48.7 bits), Expect = 0.00013, P = 0.00013
Identities = 30/93 (32%), Positives = 48/93 (51%)
Query: 340 DIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKV 399
+ +V Q++ G H++ ++ V+ G N +GQ G V + E + ++ +V
Sbjct: 173 ETRVLQVSCGRAHSLVLTDGEGVFSMGNNSYGQCGRKVVENEIYSESHRVHRMQDFDGQV 232
Query: 400 V--SCGARHSAVLTEDGQVLSWGWNKYGQLGLG 430
V +CG HS LT+ G+V S GW GQ GLG
Sbjct: 233 VQVACGQDHSLFLTDQGEVYSCGWGADGQTGLG 265
Score = 70 (29.7 bits), Expect = 4.3e-16, Sum P(2) = 4.3e-16
Identities = 32/115 (27%), Positives = 51/115 (44%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLIT--WGSA-DDEGQSYL 86
G+ P + + P+P RL D G GF L +S++ K IT WG + + Q
Sbjct: 89 GSRPRRR--IQPVPYRL-ELDQKISSAACGYGFTLLSSKT-KDITKVWGMGLNKDSQLGF 144
Query: 87 TSGKHGET--------PEPFPLPT----EASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ +T P P PLP E V++ + G AH + +T+ V++ G
Sbjct: 145 HRSRKDKTRGYEYVLEPSPVPLPLDRPQETRVLQVSCGRAHSLVLTDGEGVFSMG 199
Score = 68 (29.0 bits), Expect = 6.1e-11, Sum P(2) = 6.1e-11
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+ VV+ A G H + +T+ GEVY+ GW
Sbjct: 229 DGQVVQVACGQDHSLFLTDQGEVYSCGW 256
Score = 40 (19.1 bits), Expect = 5.6e-13, Sum P(2) = 5.6e-13
Identities = 6/17 (35%), Positives = 13/17 (76%)
Query: 213 KITKVAAGGRHTLILSD 229
++ +V+ G H+L+L+D
Sbjct: 175 RVLQVSCGRAHSLVLTD 191
Score = 39 (18.8 bits), Expect = 2.5e-11, Sum P(3) = 2.5e-11
Identities = 7/17 (41%), Positives = 12/17 (70%)
Query: 213 KITKVAAGGRHTLILSD 229
++ +VA G H+L L+D
Sbjct: 231 QVVQVACGQDHSLFLTD 247
>UNIPROTKB|Q3MHW0 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9913 "Bos taurus" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0050709 "negative regulation of protein
secretion" evidence=IEA] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=IEA] InterPro:IPR027048 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0005730 GO:GO:0045111 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
eggNOG:COG5184 GeneTree:ENSGT00700000104160 EMBL:BC104610
IPI:IPI00689945 RefSeq:NP_001069489.1 UniGene:Bt.1247
ProteinModelPortal:Q3MHW0 STRING:Q3MHW0 PRIDE:Q3MHW0
Ensembl:ENSBTAT00000007022 GeneID:534377 KEGG:bta:534377 CTD:26297
HOGENOM:HOG000154414 HOVERGEN:HBG051746 InParanoid:Q3MHW0 KO:K15421
OMA:NIWAPKP OrthoDB:EOG4J1183 NextBio:20876380
PANTHER:PTHR22870:SF7 Uniprot:Q3MHW0
Length = 464
Score = 196 (74.1 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
Identities = 51/133 (38%), Positives = 67/133 (50%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
+K I GG HSAVVTD G+L G GQ G G T + L + SL+ ++Q+A G
Sbjct: 51 IKRITGGGGHSAVVTDEGSLFVCGLNKDGQLGLGHTEEVLYFTPCKSLLGCAIQQVACGW 110
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETP-ILESKRAKVVS--CGARHS 407
T+ ++ G+V G N FGQLG + P+ P +E R KVVS G RH+
Sbjct: 111 DFTIILTENGQVLSCGSNSFGQLGV-----PHGPRRCVIPQAIELLREKVVSIAAGLRHA 165
Query: 408 AVLTEDGQVLSWG 420
T G V WG
Sbjct: 166 LAATASGTVFQWG 178
Score = 184 (69.8 bits), Expect = 5.4e-16, Sum P(2) = 5.4e-16
Identities = 59/188 (31%), Positives = 84/188 (44%)
Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAA---GL 350
+ G HSA +TDAG L +G +GQ + L P + Q E+IAA G
Sbjct: 217 VLAGSDHSASLTDAGELYVWGSNKHGQLASQAAF-LLLPQRIEARC-FQNEKIAAVWSGW 274
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKR-------------- 396
H V +V G+V+ +G +GQLG V+ E + P L
Sbjct: 275 THLVAQTVTGKVFTWGRADYGQLGRTVETREGWESEKQDPSLPGSGPQKGTPSCLPCLTG 334
Query: 397 AKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGW 455
A +SCG+ H+ + G SWGWN++G G G D P VP + FL ++ CG
Sbjct: 335 ATEISCGSEHNLAVI-GGVCHSWGWNEHGMCGDGTEADVWAPKPVPGLRFFLGLHVGCGA 393
Query: 456 WHTLLLAE 463
H+L L +
Sbjct: 394 GHSLALCQ 401
Score = 182 (69.1 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 57/184 (30%), Positives = 91/184 (49%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCG--HGSTNDQLRPSYASSLMDIQVEQIAA 348
++++ACG + ++T+ G +L+ G +GQ G HG + P A L+ +V IAA
Sbjct: 103 IQQVACGWDFTIILTENGQVLSCGSNSFGQLGVPHGPRRCVI-PQ-AIELLREKVVSIAA 160
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL--ETPI----LESKRAKVVSC 402
GL H + + G V+ +G G + + +P L + P LE+ +A V
Sbjct: 161 GLRHALAATASGTVFQWGTG-LASSGRRLCPGQTLPLFLTAKEPSTVTGLENSQAVCVLA 219
Query: 403 GARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGW--WHTLL 460
G+ HSA LT+ G++ WG NK+GQL + +P + F IA W W T L
Sbjct: 220 GSDHSASLTDAGELYVWGSNKHGQLA-SQAAFLLLPQRIEARCFQNEKIAAVWSGW-THL 277
Query: 461 LAET 464
+A+T
Sbjct: 278 VAQT 281
Score = 178 (67.7 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 56/163 (34%), Positives = 77/163 (47%)
Query: 300 HSA-VVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ-VEQIAAGLWHTVCIS 357
HS+ V A AL +G YGQ G G D L S +++I G H+ ++
Sbjct: 6 HSSEAVPTAAALFAWGANSYGQLGLGHKEDVLSAQQLSDFCKSGCIKRITGGGGHSAVVT 65
Query: 358 VEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVL 417
EG ++V G N+ GQLG G E V L + V+CG + +LTE+GQVL
Sbjct: 66 DEGSLFVCGLNKDGQLGLG--HTEEVLYFTPCKSLLGCAIQQVACGWDFTIILTENGQVL 123
Query: 418 SWGWNKYGQLGLGDSIDRN-IPSLVPIHGFLPRNIACGWWHTL 459
S G N +GQLG+ R IP + + +IA G H L
Sbjct: 124 SCGSNSFGQLGVPHGPRRCVIPQAIELLREKVVSIAAGLRHAL 166
Score = 150 (57.9 bits), Expect = 7.7e-10, Sum P(2) = 7.7e-10
Identities = 47/151 (31%), Positives = 70/151 (46%)
Query: 288 RSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ----CGHGSTNDQL----RPSYASSLM 339
R V IA G RH+ T +G + +G GL C G T PS + L
Sbjct: 152 REKVVSIAAGLRHALAATASGTVFQWGTGLASSGRRLCP-GQTLPLFLTAKEPSTVTGLE 210
Query: 340 DIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV--PKLLETPILESKRA 397
+ Q + AG H+ ++ G +YV+G N+ GQL + QA + P+ +E ++++
Sbjct: 211 NSQAVCVLAGSDHSASLTDAGELYVWGSNKHGQLAS---QAAFLLLPQRIEARCFQNEKI 267
Query: 398 KVVSCGARHSAVLTEDGQVLSWGWNKYGQLG 428
V G H T G+V +WG YGQLG
Sbjct: 268 AAVWSGWTHLVAQTVTGKVFTWGRADYGQLG 298
Score = 146 (56.5 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 37/110 (33%), Positives = 58/110 (52%)
Query: 362 VYVFGGNQFGQLGTGVDQAENVPKLLE-TPILESKRAKVVSCGARHSAVLTEDGQVLSWG 420
++ +G N +GQLG G E+V + + +S K ++ G HSAV+T++G + G
Sbjct: 17 LFAWGANSYGQLGLG--HKEDVLSAQQLSDFCKSGCIKRITGGGGHSAVVTDEGSLFVCG 74
Query: 421 WNKYGQLGLGDSIDRNIPSLVPIHGFLP---RNIACGWWHTLLLAETTQI 467
NK GQLGLG + + P L + +ACGW T++L E Q+
Sbjct: 75 LNKDGQLGLGHT--EEVLYFTPCKSLLGCAIQQVACGWDFTIILTENGQV 122
Score = 87 (35.7 bits), Expect = 5.4e-16, Sum P(2) = 5.4e-16
Identities = 24/73 (32%), Positives = 39/73 (53%)
Query: 60 CG--FALATSESGKLITWGSADDEGQSYLTSG-KHGETPEPFPLPTEASVVKAAAGWAHC 116
CG F + +E+G++++ GS + GQ + G + P+ L E VV AAG H
Sbjct: 108 CGWDFTIILTENGQVLSCGS-NSFGQLGVPHGPRRCVIPQAIELLRE-KVVSIAAGLRHA 165
Query: 117 VSVTEAGEVYTWG 129
++ T +G V+ WG
Sbjct: 166 LAATASGTVFQWG 178
Score = 85 (35.0 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 18/64 (28%), Positives = 28/64 (43%)
Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWH 352
EI+CG H+ V G ++GW +G CG G+ D P L + G H
Sbjct: 337 EISCGSEHNLAVI-GGVCHSWGWNEHGMCGDGTEADVWAPKPVPGLRFFLGLHVGCGAGH 395
Query: 353 TVCI 356
++ +
Sbjct: 396 SLAL 399
Score = 85 (35.0 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 25/90 (27%), Positives = 44/90 (48%)
Query: 43 PARLCGGDSWKDVCG-GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP 101
P+ + G ++ + VC G + + +++G+L WGS + GQ + P+
Sbjct: 203 PSTVTGLENSQAVCVLAGSDHSASLTDAGELYVWGS-NKHGQ-LASQAAFLLLPQRIEAR 260
Query: 102 TEASVVKAA--AGWAHCVSVTEAGEVYTWG 129
+ AA +GW H V+ T G+V+TWG
Sbjct: 261 CFQNEKIAAVWSGWTHLVAQTVTGKVFTWG 290
Score = 79 (32.9 bits), Expect = 3.6e-15, Sum P(2) = 3.6e-15
Identities = 23/77 (29%), Positives = 32/77 (41%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKH------GETPEPFPLPTEASVVKAAAG 112
G ALA + SG + WG+ L G+ + P + V AG
Sbjct: 161 GLRHALAATASGTVFQWGTGLASSGRRLCPGQTLPLFLTAKEPSTVTGLENSQAVCVLAG 220
Query: 113 WAHCVSVTEAGEVYTWG 129
H S+T+AGE+Y WG
Sbjct: 221 SDHSASLTDAGELYVWG 237
Score = 65 (27.9 bits), Expect = 7.0e-14, Sum P(3) = 7.0e-14
Identities = 24/83 (28%), Positives = 34/83 (40%)
Query: 47 CGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASV 106
C K + GGG A+ T E G L G D GQ L + P ++
Sbjct: 46 CKSGCIKRITGGGGHSAVVTDE-GSLFVCGLNKD-GQLGLGHTEEVLYFTPCKSLLGCAI 103
Query: 107 VKAAAGWAHCVSVTEAGEVYTWG 129
+ A GW + +TE G+V + G
Sbjct: 104 QQVACGWDFTIILTENGQVLSCG 126
Score = 48 (22.0 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
Identities = 23/70 (32%), Positives = 35/70 (50%)
Query: 96 EPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK-DST 154
EP P +EA V AAA +A G++ G +E V SA+ DF +G ++
Sbjct: 2 EPEPHSSEA-VPTAAALFAW--GANSYGQLGL-GHKEDVLSAQQLSDFCKSGCIKRITGG 57
Query: 155 GKQSALPTEQ 164
G SA+ T++
Sbjct: 58 GGHSAVVTDE 67
Score = 44 (20.5 bits), Expect = 9.2e-13, Sum P(3) = 9.2e-13
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
+E +PC L G I +VA G T+IL++
Sbjct: 87 EEVLYFTPCKSLL--GCAIQQVACGWDFTIILTE 118
Score = 39 (18.8 bits), Expect = 5.1e-11, Sum P(2) = 5.1e-11
Identities = 15/76 (19%), Positives = 30/76 (39%)
Query: 214 ITKVAAGGRHTLILSD---MXXXXXXXXXXXXXXXXXSRIKMVPTPHLIPC-LEHAASGK 269
I ++ GG H+ +++D + + P L+ C ++ A G
Sbjct: 51 IKRITGGGGHSAVVTDEGSLFVCGLNKDGQLGLGHTEEVLYFTPCKSLLGCAIQQVACGW 110
Query: 270 DRPLLVRQ-GSVNSSG 284
D +++ + G V S G
Sbjct: 111 DFTIILTENGQVLSCG 126
Score = 38 (18.4 bits), Expect = 7.0e-14, Sum P(3) = 7.0e-14
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 213 KITKVAAGGRHTL 225
K+ +AAG RH L
Sbjct: 154 KVVSIAAGLRHAL 166
>UNIPROTKB|F1RJL0 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104312 OMA:MVTLAKS
EMBL:FP326664 RefSeq:XP_003354559.2 Ensembl:ENSSSCT00000008468
GeneID:100513850 KEGG:ssc:100513850 Uniprot:F1RJL0
Length = 470
Score = 203 (76.5 bits), Expect = 8.0e-16, Sum P(3) = 8.0e-16
Identities = 57/189 (30%), Positives = 90/189 (47%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPS-YASSLMDIQVEQIAAG 349
V ++ACG HS +TD G + + GWG GQ G G N P+ L + V Q+A
Sbjct: 238 VVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSAPTKLGGDLAGVNVVQVATY 297
Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGARHSA 408
+ +S +G ++ +G +++ QL + D + NVP+ L P + K +CG A
Sbjct: 298 GDCCLAVSADGSLFGWGNSEYLQLASVTDSTQVNVPRCL--PFSGVGQVKQAACGGTGCA 355
Query: 409 VLTEDGQVLSWGWNKYGQLGLGDS-IDRNIPSLVP--IHGFLPRN-------IACGWWHT 458
VL +G V WG YG LG G + ++ +P ++P + G N I CG H
Sbjct: 356 VLNGEGHVFVWG---YGILGKGPNLVETALPEMIPPTLFGLTELNPEVRVSRIRCGLSHF 412
Query: 459 LLLAETTQI 467
L + ++
Sbjct: 413 AALTDRGEL 421
Score = 184 (69.8 bits), Expect = 5.4e-11, Sum P(2) = 5.4e-11
Identities = 53/170 (31%), Positives = 81/170 (47%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL-RPSYASSLM---DIQVEQI 346
V +++CG HS V+TD + + G YGQCG +++ S+ M D QV Q+
Sbjct: 182 VLQVSCGRAHSLVLTDGEGVFSMGNNSYGQCGRKVVENEIYSESHKVHRMQDFDGQVVQV 241
Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
A G H++ ++ +G VY G GQ G G + P L + +V + G
Sbjct: 242 ACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSAPTKLGGDLAGVNVVQVATYGDCC 301
Query: 407 SAVLTEDGQVLSWGWNKYGQLG-LGDSIDRNIPSLVPIHGF-LPRNIACG 454
AV + DG + WG ++Y QL + DS N+P +P G + ACG
Sbjct: 302 LAV-SADGSLFGWGNSEYLQLASVTDSTQVNVPRCLPFSGVGQVKQAACG 350
Score = 164 (62.8 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 56/184 (30%), Positives = 88/184 (47%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQLRPSYASSLMDI-QVEQIA 347
V ++A G V+ G+L FGWG Y Q + + Q+ + QV+Q A
Sbjct: 291 VVQVATYGDCCLAVSADGSL--FGWGNSEYLQLASVTDSTQVNVPRCLPFSGVGQVKQAA 348
Query: 348 AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAEN-VPKLLE------TPILESKRAKVV 400
G ++ EG V+V+G +G LG G + E +P+++ T + R +
Sbjct: 349 CGGTGCAVLNGEGHVFVWG---YGILGKGPNLVETALPEMIPPTLFGLTELNPEVRVSRI 405
Query: 401 SCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLL 460
CG H A LT+ G++ WG N G LG+G D+ P V + G P ++ACG H +
Sbjct: 406 RCGLSHFAALTDRGELFVWGKNIRGCLGIGRLEDQYFPWRVTMPGE-PVDVACGVDHMVT 464
Query: 461 LAET 464
LA++
Sbjct: 465 LAKS 468
Score = 128 (50.1 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 31/93 (33%), Positives = 49/93 (52%)
Query: 340 DIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKV 399
+ QV Q++ G H++ ++ V+ G N +GQ G V + E + + ++ +V
Sbjct: 179 ETQVLQVSCGRAHSLVLTDGEGVFSMGNNSYGQCGRKVVENEIYSESHKVHRMQDFDGQV 238
Query: 400 V--SCGARHSAVLTEDGQVLSWGWNKYGQLGLG 430
V +CG HS LT+ G+V S GW GQ GLG
Sbjct: 239 VQVACGQDHSLFLTDKGEVYSCGWGADGQTGLG 271
Score = 112 (44.5 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 36/134 (26%), Positives = 59/134 (44%)
Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLM------ 339
+G VK+ ACGG AV+ G + +G+G+ G+ G L +L
Sbjct: 339 SGVGQVKQAACGGTGCAVLNGEGHVFVWGYGILGK-GPNLVETALPEMIPPTLFGLTELN 397
Query: 340 -DIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAK 398
+++V +I GL H ++ G ++V+G N G LG G + + P + P
Sbjct: 398 PEVRVSRIRCGLSHFAALTDRGELFVWGKNIRGCLGIGRLEDQYFPWRVTMP----GEPV 453
Query: 399 VVSCGARHSAVLTE 412
V+CG H L +
Sbjct: 454 DVACGVDHMVTLAK 467
Score = 68 (29.0 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+ VV+ A G H + +T+ GEVY+ GW
Sbjct: 235 DGQVVQVACGQDHSLFLTDKGEVYSCGW 262
Score = 65 (27.9 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 25/86 (29%), Positives = 42/86 (48%)
Query: 60 CG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE---ASVVKAAAGWA 114
CG +L ++ G++ + G D GQ+ L G + T P L + +VV+ A
Sbjct: 243 CGQDHSLFLTDKGEVYSCGWGAD-GQTGL--GHYNITSAPTKLGGDLAGVNVVQVATYGD 299
Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVT 140
C++V+ G ++ WG E + A VT
Sbjct: 300 CCLAVSADGSLFGWGNSEYLQLASVT 325
Score = 61 (26.5 bits), Expect = 8.0e-16, Sum P(3) = 8.0e-16
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 94 TPEPFPL--PTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+P P PL P E V++ + G AH + +T+ V++ G
Sbjct: 168 SPVPLPLHRPQETQVLQVSCGRAHSLVLTDGEGVFSMG 205
Score = 39 (18.8 bits), Expect = 8.0e-16, Sum P(3) = 8.0e-16
Identities = 7/17 (41%), Positives = 12/17 (70%)
Query: 213 KITKVAAGGRHTLILSD 229
++ +VA G H+L L+D
Sbjct: 237 QVVQVACGQDHSLFLTD 253
Score = 39 (18.8 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 6/17 (35%), Positives = 13/17 (76%)
Query: 213 KITKVAAGGRHTLILSD 229
++ +V+ G H+L+L+D
Sbjct: 181 QVLQVSCGRAHSLVLTD 197
>UNIPROTKB|Q7ZZC8 [details] [associations]
symbol:nek9 "Serine/threonine-protein kinase Nek9"
species:8355 "Xenopus laevis" [GO:0019901 "protein kinase binding"
evidence=ISS] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 GO:GO:0005737 GO:GO:0019901
GO:GO:0051301 GO:GO:0007067 GO:GO:0046872 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
HOVERGEN:HBG039572 EMBL:AY271412 UniGene:Xl.77246
ProteinModelPortal:Q7ZZC8 Xenbase:XB-GENE-974105 Uniprot:Q7ZZC8
Length = 944
Score = 233 (87.1 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 59/182 (32%), Positives = 85/182 (46%)
Query: 292 KEIACGGRHSAVVTDAGALLTF-----GWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQI 346
+++ G H AVVT L T+ G L+GQ GHG +P + L V+++
Sbjct: 354 RQVCAGDAHFAVVTVEKELYTWVNMQGGSKLHGQLGHGDRASYRQPKHVEKLQGKSVQKV 413
Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
+ G TVCI+ EG++Y FG + +G LG V + L ++ VSCG H
Sbjct: 414 SCGSDFTVCITDEGQLYSFGSDYYGCLGVNQSAGSEVLEPLLVDFFLNEPVDQVSCGDSH 473
Query: 407 SAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIH-GFLPRNIACGWWHTLLLAETT 465
LT V SWG +YG+LGL D P V + G N+ CG + LL T
Sbjct: 474 IMALTRSKSVYSWGCGEYGRLGLDSEDDVYSPQKVEVQRGLCIVNVCCGSDGSFLLTLTG 533
Query: 466 QI 467
++
Sbjct: 534 KV 535
Score = 166 (63.5 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 42/145 (28%), Positives = 77/145 (53%)
Query: 287 GRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG--HGSTNDQLRPSYASSLMDIQVE 344
G+S V++++CG + +TD G L +FG YG G + ++ L P ++ V+
Sbjct: 407 GKS-VQKVSCGSDFTVCITDEGQLYSFGSDYYGCLGVNQSAGSEVLEPLLVDFFLNEPVD 465
Query: 345 QIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGA 404
Q++ G H + ++ VY +G ++G+LG +D ++V + + V CG+
Sbjct: 466 QVSCGDSHIMALTRSKSVYSWGCGEYGRLG--LDSEDDVYSPQKVEVQRGLCIVNVCCGS 523
Query: 405 RHSAVLTEDGQVLSWGWNKYGQLGL 429
S +LT G+VL+ G N++ +LGL
Sbjct: 524 DGSFLLTLTGKVLACGLNEHNKLGL 548
Score = 161 (61.7 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 57/196 (29%), Positives = 86/196 (43%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCG-----HGSTNDQL--RPSYASSLM---- 339
+ + CG S ++T G +L G + + G G N + Y +SL
Sbjct: 516 IVNVCCGSDGSFLLTLTGKVLACGLNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQ 575
Query: 340 --DIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLETPILESKR 396
++ I+ G HT I GR+ FG N+ GQLG G D +++ LL P L K+
Sbjct: 576 LSFYKIRSISPGRTHTAAIDERGRLLTFGSNKCGQLGVG-DYRKHLGINLLGGP-LGGKQ 633
Query: 397 AKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL-------GDSIDRNIPSLVPIHGFLPR 449
VSCG + T D + +WG G+L + G I + P PI G L
Sbjct: 634 VIRVSCGDEFTTAATADNHIFAWGNGGNGRLAMTPNERPQGSDICTSWPR--PIFGSLHH 691
Query: 450 --NIACGWWHTLLLAE 463
+++C WHT+L+ E
Sbjct: 692 VTDLSCRGWHTILIVE 707
Score = 153 (58.9 bits), Expect = 9.1e-12, Sum P(2) = 9.1e-12
Identities = 45/177 (25%), Positives = 85/177 (48%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
V +++CG H +T + ++ ++G G YG+ G S +D P + + + G
Sbjct: 464 VDQVSCGDSHIMALTRSKSVYSWGCGEYGRLGLDSEDDVYSPQKVEVQRGLCIVNVCCGS 523
Query: 351 WHTVCISVEGRVYVFGGNQFGQLG-----TGV---DQAENVPKLLETPI---LESKRAKV 399
+ +++ G+V G N+ +LG G+ + + VP + L + +
Sbjct: 524 DGSFLLTLTGKVLACGLNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLSFYKIRS 583
Query: 400 VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV--PIHGFLPRNIACG 454
+S G H+A + E G++L++G NK GQLG+GD +L+ P+ G ++CG
Sbjct: 584 ISPGRTHTAAIDERGRLLTFGSNKCGQLGVGDYRKHLGINLLGGPLGGKQVIRVSCG 640
Score = 89 (36.4 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 32/113 (28%), Positives = 51/113 (45%)
Query: 22 VYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDE 81
VY+WG T+P+K + GG + VC G FA+ T E +L TW +
Sbjct: 331 VYVWGG-GKTTPQKLDVFK-------GGWRARQVCAGDAHFAVVTVEK-ELYTWVNMQGG 381
Query: 82 GQSYLTSGKHGET-----PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ + G HG+ P+ SV K + G V +T+ G++Y++G
Sbjct: 382 SKLHGQLG-HGDRASYRQPKHVEKLQGKSVQKVSCGSDFTVCITDEGQLYSFG 433
Score = 72 (30.4 bits), Expect = 6.9e-11, Sum P(2) = 6.9e-11
Identities = 24/90 (26%), Positives = 41/90 (45%)
Query: 45 RLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP--T 102
+L G K CG F + ++ G+L ++GS D G + E EP +
Sbjct: 404 KLQGKSVQKVSCGSD--FTVCITDEGQLYSFGS-DYYGCLGVNQSAGSEVLEPLLVDFFL 460
Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
V + + G +H +++T + VY+WG E
Sbjct: 461 NEPVDQVSCGDSHIMALTRSKSVYSWGCGE 490
Score = 40 (19.1 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 117 VSVTEAGEVYTWGWRECVP 135
V + + EVY WG + P
Sbjct: 323 VVTSRSSEVYVWGGGKTTP 341
>ZFIN|ZDB-GENE-020509-1 [details] [associations]
symbol:nek8 "NIMA (never in mitosis gene a)-related
kinase 8" species:7955 "Danio rerio" [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0061326 "renal tubule development" evidence=IMP]
[GO:0072116 "pronephros formation" evidence=IGI] [GO:0072372
"primary cilium" evidence=IDA] [GO:0001947 "heart looping"
evidence=IGI] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-020509-1 GO:GO:0005524 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0072372 GO:GO:0001947 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 KO:K08857 EMBL:AF407580
IPI:IPI00770181 RefSeq:NP_620776.1 UniGene:Dr.12587
ProteinModelPortal:Q90XC2 GeneID:171094 KEGG:dre:171094 CTD:284086
HOGENOM:HOG000006908 HOVERGEN:HBG098799 InParanoid:Q90XC2
NextBio:20797120 ArrayExpress:Q90XC2 GO:GO:0072116 GO:GO:0061326
Uniprot:Q90XC2
Length = 697
Score = 217 (81.4 bits), Expect = 1.7e-15, Sum P(2) = 1.7e-15
Identities = 45/147 (30%), Positives = 82/147 (55%)
Query: 284 GKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQV 343
G++G + +K ++CG + +TD G ++TFG G G GHG+ ND +P +L+ ++
Sbjct: 394 GQSGVT-IKSVSCGDLFTTCLTDRGIIMTFGSGSNGCLGHGNFNDVTQPKIVEALLGYEL 452
Query: 344 EQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI-LESKRAKVVSC 402
Q++ G H + ++ E V+ +G G+LG + N P+ + P E++R V C
Sbjct: 453 VQVSCGASHVLAVTNEREVFSWGRGDNGRLGLATQDSHNCPQQVSLPADFEAQR---VLC 509
Query: 403 GARHSAVLTEDGQVLSWGWNKYGQLGL 429
G S +++ Q+L+ G N++ +LGL
Sbjct: 510 GVDCSMIMSTQHQILACGNNRFNKLGL 536
Score = 167 (63.8 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 50/187 (26%), Positives = 86/187 (45%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN-----DQLRPSYASSLMD----I 341
V +++ G VT +G L+T W G G +Q++P + S ++ +
Sbjct: 342 VIQVSLGRTQKMGVTKSGRLIT--WEA-PSVGSGEPTLPGAVEQMQPQFISRFLEGQSGV 398
Query: 342 QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVS 401
++ ++ G T C++ G + FG G LG G PK++E +L + +V S
Sbjct: 399 TIKSVSCGDLFTTCLTDRGIIMTFGSGSNGCLGHGNFNDVTQPKIVEA-LLGYELVQV-S 456
Query: 402 CGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHG-FLPRNIACGWWHTLL 460
CGA H +T + +V SWG G+LGL N P V + F + + CG +++
Sbjct: 457 CGASHVLAVTNEREVFSWGRGDNGRLGLATQDSHNCPQQVSLPADFEAQRVLCGVDCSMI 516
Query: 461 LAETTQI 467
++ QI
Sbjct: 517 MSTQHQI 523
Score = 162 (62.1 bits), Expect = 4.5e-12, Sum P(2) = 4.5e-12
Identities = 46/188 (24%), Positives = 89/188 (47%)
Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWH 352
+++CG H VT+ + ++G G G+ G + + P S D + +++ G+
Sbjct: 454 QVSCGASHVLAVTNEREVFSWGRGDNGRLGLATQDSHNCPQQVSLPADFEAQRVLCGVDC 513
Query: 353 TVCISVEGRVYVFGGNQFGQLG----TGVD------QAENVP--KLLETPILESKRAKVV 400
++ +S + ++ G N+F +LG +G + Q E V +L+++ L +++ +
Sbjct: 514 SMIMSTQHQILACGNNRFNKLGLDKVSGTEEPSSFCQVEEVHLFQLVQSAPLNTEKIVYI 573
Query: 401 SCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTL 459
G HS +TE GQ ++G N++GQLG +P V + G ACG TL
Sbjct: 574 DIGTAHSVAVTEKGQCFTFGSNQHGQLGCSHRRSSRVPYQVSGLQGITMA--ACGDAFTL 631
Query: 460 LLAETTQI 467
+ ++
Sbjct: 632 AIGAEGEV 639
Score = 137 (53.3 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 36/122 (29%), Positives = 61/122 (50%)
Query: 342 QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVS 401
++ I G H+V ++ +G+ + FG NQ GQLG ++ VP + L+ + +
Sbjct: 569 KIVYIDIGTAHSVAVTEKGQCFTFGSNQHGQLGCSHRRSSRVP--YQVSGLQG--ITMAA 624
Query: 402 CGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI---HGFLPRNIACGWWHT 458
CG + + +G+V +WG G+LG + D IP V + H F ++AC +T
Sbjct: 625 CGDAFTLAIGAEGEVYTWGKGARGRLGRKEE-DFGIPKPVQLDESHAFTVTSVACCHGNT 683
Query: 459 LL 460
LL
Sbjct: 684 LL 685
Score = 79 (32.9 bits), Expect = 4.5e-12, Sum P(2) = 4.5e-12
Identities = 26/106 (24%), Positives = 46/106 (43%)
Query: 28 LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSY 85
LPG + P +R G S + CG F ++ G ++T+GS +
Sbjct: 376 LPGAVEQMQP---QFISRFLEGQSGVTIKSVSCGDLFTTCLTDRGIIMTFGSGSN---GC 429
Query: 86 LTSGKHGETPEPFPLPTEAS--VVKAAAGWAHCVSVTEAGEVYTWG 129
L G + +P + +V+ + G +H ++VT EV++WG
Sbjct: 430 LGHGNFNDVTQPKIVEALLGYELVQVSCGASHVLAVTNEREVFSWG 475
Score = 54 (24.1 bits), Expect = 9.7e-07, Sum P(2) = 9.7e-07
Identities = 12/54 (22%), Positives = 20/54 (37%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAG 112
G LA + ++ +WG D+ T H P+ LP + + G
Sbjct: 458 GASHVLAVTNEREVFSWGRGDNGRLGLATQDSHN-CPQQVSLPADFEAQRVLCG 510
Score = 52 (23.4 bits), Expect = 1.7e-15, Sum P(2) = 1.7e-15
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 84 SYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTW 128
S T G TP P+ V++ + G + VT++G + TW
Sbjct: 321 SVYTWGSGISTPLRLPM-LNTEVIQVSLGRTQKMGVTKSGRLITW 364
Score = 47 (21.6 bits), Expect = 9.0e-09, Sum P(2) = 9.0e-09
Identities = 28/114 (24%), Positives = 50/114 (43%)
Query: 22 VYMWGYLPGTS-PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSAD- 79
VY WG G S P + P+L+ ++ G + K + ++SG+LITW +
Sbjct: 322 VYTWG--SGISTPLRLPMLNTEVIQVSLGRTQK----------MGVTKSGRLITWEAPSV 369
Query: 80 DEGQSYLTSGKHGETPEPFP--LPTEASV-VKAAA-GWAHCVSVTEAGEVYTWG 129
G+ L P+ L ++ V +K+ + G +T+ G + T+G
Sbjct: 370 GSGEPTLPGAVEQMQPQFISRFLEGQSGVTIKSVSCGDLFTTCLTDRGIIMTFG 423
>FB|FBgn0045980 [details] [associations]
symbol:niki "nimA-like kinase" species:7227 "Drosophila
melanogaster" [GO:0004702 "receptor signaling protein
serine/threonine kinase activity" evidence=ISS;NAS] [GO:0006468
"protein phosphorylation" evidence=IEA;NAS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0048812 "neuron projection
morphogenesis" evidence=IMP] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE014297
GO:GO:0005524 eggNOG:COG0515 SUPFAM:SSF56112 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004702 HSSP:O14965
PRINTS:PR00633 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104137 RefSeq:NP_651293.1 UniGene:Dm.27397
ProteinModelPortal:Q9VC32 SMR:Q9VC32 PRIDE:Q9VC32
EnsemblMetazoa:FBtr0084737 GeneID:42959 KEGG:dme:Dmel_CG10951
UCSC:CG10951-RA CTD:42959 FlyBase:FBgn0045980 InParanoid:Q9VC32
OMA:WRHYPTK OrthoDB:EOG4FJ6QP PhylomeDB:Q9VC32 GenomeRNAi:42959
NextBio:831528 ArrayExpress:Q9VC32 Bgee:Q9VC32 Uniprot:Q9VC32
Length = 841
Score = 202 (76.2 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 60/181 (33%), Positives = 92/181 (50%)
Query: 288 RSYVKEIACGGR-HSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQI 346
R+Y AC G + +VT AG+LL+ G + G + P + L D++VEQ+
Sbjct: 503 RNYHVVSACAGDGFTILVTQAGSLLSCGSNAHLALGQDEQRNYHSPKLIARLADVRVEQV 562
Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTG-VDQAENVPKLLETPILESKRAKVVSCGAR 405
AAGL H + +S EG VYV+G + G LG G Q + P+ + +++K +K+ CG
Sbjct: 563 AAGLQHVLALSREGAVYVWGTSTCGALGLGNYQQQQKFPQKILLSHVKTKPSKIY-CGPD 621
Query: 406 HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNI--AC-GWWHTLLLA 462
SAVL +G++ G N Y +LG S I + + LP + AC H++ L
Sbjct: 622 TSAVLFANGELHVCGSNDYNKLGFQRSA--KITAFKKVQ--LPHKVTQACFSSTHSVFLV 677
Query: 463 E 463
E
Sbjct: 678 E 678
Score = 150 (57.9 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 48/173 (27%), Positives = 76/173 (43%)
Query: 288 RSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR-PSYASSLMDIQVEQI 346
++ + ++A H VV + G+ +G G +GQ G + PS S+ + V
Sbjct: 451 KAVIVDVAMSDSHFVVVNEDGSAYAWGEGTHGQLGLTALEAWKHYPSRMESVRNYHVVSA 510
Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV--PKLLETPILESKRAKVVSCGA 404
AG T+ ++ G + G N L G D+ N PKL+ L R + V+ G
Sbjct: 511 CAGDGFTILVTQAGSLLSCGSN--AHLALGQDEQRNYHSPKLIAR--LADVRVEQVAAGL 566
Query: 405 RHSAVLTEDGQVLSWGWNKYGQLGLGD-SIDRNIPSLVPI-H-GFLPRNIACG 454
+H L+ +G V WG + G LGLG+ + P + + H P I CG
Sbjct: 567 QHVLALSREGAVYVWGTSTCGALGLGNYQQQQKFPQKILLSHVKTKPSKIYCG 619
Score = 104 (41.7 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 41/157 (26%), Positives = 70/157 (44%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVE--QIAA 348
V+++A G +H ++ GA+ +G G G G+ Q + L ++ + +I
Sbjct: 559 VEQVAAGLQHVLALSREGAVYVWGTSTCGALGLGNYQQQQKFPQKILLSHVKTKPSKIYC 618
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVV-SC-GARH 406
G + + G ++V G N + +LG K ++ P KV +C + H
Sbjct: 619 GPDTSAVLFANGELHVCGSNDYNKLGFQRSAKITAFKKVQLP------HKVTQACFSSTH 672
Query: 407 SAVLTEDGQVLSWGWNKYGQLGLG--DSIDRNIPSLV 441
S L E G V + G N GQ G+ +S+D P+LV
Sbjct: 673 SVFLVEGGYVYTMGRNAEGQRGIRHCNSVDH--PTLV 707
Score = 92 (37.4 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 35/140 (25%), Positives = 63/140 (45%)
Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWH 352
+I CG SAV+ G L G Y + G + ++ ++ + +V Q H
Sbjct: 615 KIYCGPDTSAVLFANGELHVCGSNDYNKLGF-QRSAKIT-AFKKVQLPHKVTQACFSSTH 672
Query: 353 TVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTE 412
+V + G VY G N GQ G + + P L+++ ++S+ +C + + V +E
Sbjct: 673 SVFLVEGGYVYTMGRNAEGQRGIRHCNSVDHPTLVDS--VKSRYIVKANCSDQCTIVASE 730
Query: 413 DGQVLSWGWNKYGQLGLGDS 432
D + WG + G G+G +
Sbjct: 731 DNIITVWG-TRNGLPGIGST 749
Score = 85 (35.0 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 22/82 (26%), Positives = 40/82 (48%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE----TPEPFPLPTEASVVKAAA 111
C G GF + +++G L++ GS ++L G+ + +P+ + V + AA
Sbjct: 511 CAGD-GFTILVTQAGSLLSCGS-----NAHLALGQDEQRNYHSPKLIARLADVRVEQVAA 564
Query: 112 GWAHCVSVTEAGEVYTWGWREC 133
G H ++++ G VY WG C
Sbjct: 565 GLQHVLALSREGAVYVWGTSTC 586
Score = 70 (29.7 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 14/33 (42%), Positives = 17/33 (51%)
Query: 97 PFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P LP +A +V A +H V V E G Y WG
Sbjct: 445 PIQLPPKAVIVDVAMSDSHFVVVNEDGSAYAWG 477
Score = 58 (25.5 bits), Expect = 0.00020, Sum P(3) = 0.00020
Identities = 21/69 (30%), Positives = 28/69 (40%)
Query: 64 LATSESGKLITWGSADDEGQSYLTS---GKHGETPEPFPLPTEASVVKAAAGWAHCVSVT 120
+ +E G WG GQ LT+ KH P VV A AG + VT
Sbjct: 465 VVVNEDGSAYAWGEGT-HGQLGLTALEAWKH--YPSRMESVRNYHVVSACAGDGFTILVT 521
Query: 121 EAGEVYTWG 129
+AG + + G
Sbjct: 522 QAGSLLSCG 530
Score = 51 (23.0 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILS 228
SP L+ V++ +VAAG +H L LS
Sbjct: 547 SPKLIARLADVRVEQVAAGLQHVLALS 573
>TAIR|locus:2090136 [details] [associations]
symbol:AT3G15430 "AT3G15430" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] [GO:0006486 "protein glycosylation" evidence=RCA]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002686 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 EMBL:AB022218 EMBL:AC024081 HSSP:P18754
EMBL:AY150379 IPI:IPI00535822 RefSeq:NP_566512.1 RefSeq:NP_974323.1
UniGene:At.24353 ProteinModelPortal:Q9LDU3 SMR:Q9LDU3 IntAct:Q9LDU3
EnsemblPlants:AT3G15430.1 EnsemblPlants:AT3G15430.2 GeneID:820782
KEGG:ath:AT3G15430 TAIR:At3g15430 InParanoid:Q9LDU3 OMA:GDNERAQ
PhylomeDB:Q9LDU3 ProtClustDB:CLSN2688406 Genevestigator:Q9LDU3
Uniprot:Q9LDU3
Length = 488
Score = 197 (74.4 bits), Expect = 2.8e-14, Sum P(3) = 2.8e-14
Identities = 57/175 (32%), Positives = 84/175 (48%)
Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDI-QVEQIAAGL 350
K++A G + ++ G T G +GQ GHG T D+ P L I V QIAAG
Sbjct: 219 KQVAAGLHFTVFLSREGHAYTCGSNTHGQLGHGDTLDRPVPKVVEFLKTIGPVVQIAAGP 278
Query: 351 WHTVCISVEGRVYVFG-GNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
+ + ++ +G VY FG G+ F LG G Q E P++++ + VS G H+
Sbjct: 279 SYVLAVTQDGSVYSFGSGSNFC-LGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVA 337
Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNIPS-LVPIHGFLPRNIACGWWHTLLLAE 463
L +G+V +WG G LG GD D+ P LV ++ L + T +L E
Sbjct: 338 LDSNGRVYTWGKGYCGALGHGDENDKITPQVLVNLNNCLAVQVCARKRKTFVLVE 392
Score = 188 (71.2 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 52/153 (33%), Positives = 76/153 (49%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL-RPSYASSLMDIQVEQIAAG 349
V +++ HSA V +G +LT G CGH T+ + RP +L +Q+AAG
Sbjct: 165 VAQVSATQNHSAFVLQSGQVLTCGDNSSHCCGHLDTSRPIFRPKLVEALKGTPCKQVAAG 224
Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKV-VSCGARHSA 408
L TV +S EG Y G N GQLG G VPK++E L++ V ++ G +
Sbjct: 225 LHFTVFLSREGHAYTCGSNTHGQLGHGDTLDRPVPKVVE--FLKTIGPVVQIAAGPSYVL 282
Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
+T+DG V S+G LG G+ D P ++
Sbjct: 283 AVTQDGSVYSFGSGSNFCLGHGEQQDELQPRVI 315
Score = 181 (68.8 bits), Expect = 2.4e-15, Sum P(2) = 2.4e-15
Identities = 58/197 (29%), Positives = 92/197 (46%)
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
CL H G+ + L Q V + K ++ ++ G H+ + G + T+G G G
Sbjct: 300 CLGH---GEQQDEL--QPRVIQAFKRKGIHILRVSAGDEHAVALDSNGRVYTWGKGYCGA 354
Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG---TGV 377
GHG ND++ P +L + Q+ A T + G +Y FG FG LG GV
Sbjct: 355 LGHGDENDKITPQVLVNLNNCLAVQVCARKRKTFVLVEGGLLYGFGWMGFGSLGFPDRGV 414
Query: 378 DQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI 437
P++LE L+ R VS G H+ V+T+ G++ +G N+ QLG DS+ +
Sbjct: 415 SDKVLRPRVLEC--LKPHRVSQVSTGLYHTIVVTQRGRIFGFGDNERAQLG-HDSLRGCL 471
Query: 438 -PSLVPIHGFLPRNIAC 453
P+ + +H R+ C
Sbjct: 472 EPTEIFLHCGRSRSRLC 488
Score = 145 (56.1 bits), Expect = 6.7e-07, P = 6.7e-07
Identities = 44/152 (28%), Positives = 72/152 (47%)
Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSL-MDIQVEQIAAGLW 351
+IA G H+ ++ ++ + + G L G HGS Q QV Q++A
Sbjct: 115 QIATGKYHTLLINNS-KVYSCGVSLSGVLAHGSETTQCVAFTPIEFPFPAQVAQVSATQN 173
Query: 352 HTVCISVEGRVYVFGGNQFGQLGTGVDQAENV--PKLLETPILESKRAKVVSCGARHSAV 409
H+ + G+V G N G +D + + PKL+E L+ K V+ G +
Sbjct: 174 HSAFVLQSGQVLTCGDNSSHCCGH-LDTSRPIFRPKLVEA--LKGTPCKQVAAGLHFTVF 230
Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
L+ +G + G N +GQLG GD++DR +P +V
Sbjct: 231 LSREGHAYTCGSNTHGQLGHGDTLDRPVPKVV 262
Score = 85 (35.0 bits), Expect = 2.4e-15, Sum P(2) = 2.4e-15
Identities = 34/99 (34%), Positives = 46/99 (46%)
Query: 37 PILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPE 96
PI P G K V G F + S G T GS + GQ G HG+T +
Sbjct: 203 PIFRPKLVEALKGTPCKQVAAG-LHFTVFLSREGHAYTCGS-NTHGQL----G-HGDTLD 255
Query: 97 -PFP-----LPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P P L T VV+ AAG ++ ++VT+ G VY++G
Sbjct: 256 RPVPKVVEFLKTIGPVVQIAAGPSYVLAVTQDGSVYSFG 294
Score = 56 (24.8 bits), Expect = 2.8e-14, Sum P(3) = 2.8e-14
Identities = 13/36 (36%), Positives = 18/36 (50%)
Query: 94 TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
TP FP P + + V A H V ++G+V T G
Sbjct: 155 TPIEFPFPAQVAQVSATQN--HSAFVLQSGQVLTCG 188
Score = 37 (18.1 bits), Expect = 2.8e-14, Sum P(3) = 2.8e-14
Identities = 11/26 (42%), Positives = 13/26 (50%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILS 228
P LV G +VAAG T+ LS
Sbjct: 207 PKLVEALKGTPCKQVAAGLHFTVFLS 232
>UNIPROTKB|A6NED2 [details] [associations]
symbol:RCCD1 "RCC1 domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:CH471101 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 EMBL:AC068831
EMBL:BC113826 EMBL:BC140708 EMBL:BC140709 IPI:IPI00399158
RefSeq:NP_001017919.1 RefSeq:NP_291022.2 UniGene:Hs.655895
ProteinModelPortal:A6NED2 SMR:A6NED2 STRING:A6NED2
PhosphoSite:A6NED2 PaxDb:A6NED2 PRIDE:A6NED2
Ensembl:ENST00000394258 Ensembl:ENST00000556618 GeneID:91433
KEGG:hsa:91433 UCSC:uc002bqj.3 CTD:91433 GeneCards:GC15P091498
HGNC:HGNC:30457 HPA:HPA039683 HPA:HPA040776 neXtProt:NX_A6NED2
PharmGKB:PA142671092 eggNOG:NOG305770 HOGENOM:HOG000154085
HOVERGEN:HBG061852 InParanoid:A6NED2 OMA:ERPGAWF OrthoDB:EOG41NTMF
PhylomeDB:A6NED2 GenomeRNAi:91433 NextBio:77244 ArrayExpress:A6NED2
Bgee:A6NED2 CleanEx:HS_RCCD1 Genevestigator:A6NED2 Uniprot:A6NED2
Length = 376
Score = 176 (67.0 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 29/82 (35%), Positives = 52/82 (63%)
Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW 351
+++ G H+ ++ AG + ++G G +GQ GHG+ +L P +L + + ++AAG W
Sbjct: 161 RQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLVMAEVAAGGW 220
Query: 352 HTVCISVEGRVYVFGGNQFGQL 373
H+VC+S G +Y++G N+ GQL
Sbjct: 221 HSVCVSETGDIYIWGWNESGQL 242
Score = 169 (64.5 bits), Expect = 6.5e-13, Sum P(3) = 6.5e-13
Identities = 54/174 (31%), Positives = 84/174 (48%)
Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWH 352
E+A GG HS V++ G + +GW GQ + N L + E +A
Sbjct: 214 EVAAGGWHSVCVSETGDIYIWGWNESGQLALPTRN----------LAE-DGETVAR---E 259
Query: 353 TVCISVEG-RVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLT 411
++ +G +V GG + G + + P LL+ P + S K SCG+RH+AV+T
Sbjct: 260 ATELNEDGSQVKRTGGAEDGAPAPFI-AVQPFPALLDLP-MGSDAVKA-SCGSRHTAVVT 316
Query: 412 EDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP--IHGFLP-RNIACGWWHTLLLA 462
G++ +WGW KYGQLG D+ + P V + L + + CG W+T + A
Sbjct: 317 RTGELYTWGWGKYGQLGHEDTTSLDRPRRVEYFVDKQLQVKAVTCGPWNTYVYA 370
Score = 169 (64.5 bits), Expect = 8.3e-10, P = 8.3e-10
Identities = 35/98 (35%), Positives = 53/98 (54%)
Query: 332 PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
P Y +++ Q+ G H + + G+V+ +GG + GQLG G +AE P+LLE
Sbjct: 149 PFYRPLAPELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEA-- 206
Query: 392 LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
L+ V+ G HS ++E G + WGWN+ GQL L
Sbjct: 207 LQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQLAL 244
Score = 154 (59.3 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
Identities = 33/75 (44%), Positives = 42/75 (56%)
Query: 287 GRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMD--IQVE 344
G VK +CG RH+AVVT G L T+GWG YGQ GH T RP +D +QV+
Sbjct: 299 GSDAVKA-SCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRRVEYFVDKQLQVK 357
Query: 345 QIAAGLWHTVCISVE 359
+ G W+T +VE
Sbjct: 358 AVTCGPWNTYVYAVE 372
Score = 138 (53.6 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 58/207 (28%), Positives = 90/207 (43%)
Query: 276 RQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW--GLYGQCGHGSTNDQLR-- 331
RQ S +AG + ++ ++A VT G L G G G+C ++ L
Sbjct: 27 RQVHSPSPLRAGVDICR-VSASWSYTAFVTRGGRLELSGSASGAAGRCKDAWASEGLLAV 85
Query: 332 ----PSYASSLMDIQVEQIAAG--LW-HTVCISVEGRVYVFGGNQFGQLGT-GVDQAENV 383
P + L E G LW V EG G Q G+L +A
Sbjct: 86 LRAGPGPEALLQVWAAESALRGEPLWAQNVVPEAEGEDDPAGEAQAGRLPLLPCARAYVS 145
Query: 384 PKL-LETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI-PSLV 441
P+ P+ RA+ + GA H+ +L GQV SWG ++GQLG G +++ + P L+
Sbjct: 146 PRAPFYRPLAPELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHG-TLEAELEPRLL 204
Query: 442 P-IHGFLPRNIACGWWHTLLLAETTQI 467
+ G + +A G WH++ ++ET I
Sbjct: 205 EALQGLVMAEVAAGGWHSVCVSETGDI 231
Score = 110 (43.8 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
Identities = 32/92 (34%), Positives = 41/92 (44%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA---AAGWAH 115
G AL +G++ +WG GQ L G EP L +V A A GW H
Sbjct: 166 GAEHALLLDAAGQVFSWGGGR-HGQ--LGHGTLEAELEPRLLEALQGLVMAEVAAGGW-H 221
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG 147
V V+E G++Y WGW E A TR+ G
Sbjct: 222 SVCVSETGDIYIWGWNESGQLALPTRNLAEDG 253
Score = 54 (24.1 bits), Expect = 6.5e-13, Sum P(3) = 6.5e-13
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 97 PF--PLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
PF PL E + G H + + AG+V++WG
Sbjct: 149 PFYRPLAPELRARQLELGAEHALLLDAAGQVFSWG 183
Score = 51 (23.0 bits), Expect = 6.5e-13, Sum P(3) = 6.5e-13
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSD 229
L P L+ G+ + +VAAGG H++ +S+
Sbjct: 199 LEPRLLEALQGLVMAEVAAGGWHSVCVSE 227
>UNIPROTKB|C9JRH2 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 OrthoDB:EOG4320Z9
IPI:IPI00927389 ProteinModelPortal:C9JRH2 SMR:C9JRH2 STRING:C9JRH2
Ensembl:ENST00000427469 ArrayExpress:C9JRH2 Bgee:C9JRH2
Uniprot:C9JRH2
Length = 230
Score = 199 (75.1 bits), Expect = 3.0e-15, P = 3.0e-15
Identities = 57/149 (38%), Positives = 85/149 (57%)
Query: 300 HSAVVTDAGALLTFGWGLYGQCGHG-STNDQLRPSYASSLMDIQVEQIAAGLWHTVCISV 358
H + T+ G +LT G G GQ G G + ++ +P+ S D+ V+ A G+ HTVC+S
Sbjct: 27 HRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDV-VQAEAGGM-HTVCLSK 84
Query: 359 EGRVYVFGGNQFGQLG--TGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQV 416
G+VY FG N G LG T V+ +E VP +E L+ K +V S G H+A LT+DG+V
Sbjct: 85 SGQVYSFGCNDEGALGRDTSVEGSEMVPGKVE---LQEKVVQV-SAGDSHTAALTDDGRV 140
Query: 417 LSWGW--NKYGQLGLGDSIDRNIPSLVPI 443
WG + G +GL + + + S+VP+
Sbjct: 141 FLWGSFRDNNGVIGLLEPMKK---SMVPV 166
Score = 120 (47.3 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 39/143 (27%), Positives = 69/143 (48%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST--NDQLRPSYASSLMDIQVEQIAA 348
V + GG H+ ++ +G + +FG G G ++ ++ P + +V Q++A
Sbjct: 69 VVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVE--LQEKVVQVSA 126
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI---LESKRAKVVSCGAR 405
G HT ++ +GRV+++G F + E + K + P+ L+ KV S G
Sbjct: 127 GDSHTAALTDDGRVFLWGS--FRDNNGVIGLLEPMKKSM-VPVQVQLDVPVVKVAS-GND 182
Query: 406 HSAVLTEDGQVLSWGWNKYGQLG 428
H +LT DG + + G + GQLG
Sbjct: 183 HLVMLTADGDLYTLGCGEQGQLG 205
>UNIPROTKB|Q9P258 [details] [associations]
symbol:RCC2 "Protein RCC2" species:9606 "Homo sapiens"
[GO:0005874 "microtubule" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0000775 "chromosome, centromeric region"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005819
"spindle" evidence=IEA] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 Reactome:REACT_115566 Reactome:REACT_21300
GO:GO:0000775 GO:GO:0005730 GO:GO:0051301 GO:GO:0005819
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005874
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GO:GO:0000236 CTD:55920 HOGENOM:HOG000232061
HOVERGEN:HBG080538 OMA:FGENKLG OrthoDB:EOG4DNF4B EMBL:AJ421269
EMBL:AB040903 EMBL:BC004933 EMBL:BC042141 EMBL:BC053908
EMBL:AL359612 IPI:IPI00465044 PIR:T50630 RefSeq:NP_001129676.1
RefSeq:NP_061185.1 UniGene:Hs.380857 ProteinModelPortal:Q9P258
SMR:Q9P258 IntAct:Q9P258 STRING:Q9P258 PhosphoSite:Q9P258
DMDM:71152033 SWISS-2DPAGE:Q9P258 PaxDb:Q9P258 PeptideAtlas:Q9P258
PRIDE:Q9P258 Ensembl:ENST00000375433 Ensembl:ENST00000375436
GeneID:55920 KEGG:hsa:55920 UCSC:uc001bal.3 GeneCards:GC01M017733
HGNC:HGNC:30297 MIM:609587 neXtProt:NX_Q9P258 PharmGKB:PA142671091
InParanoid:Q9P258 GenomeRNAi:55920 NextBio:61323 Bgee:Q9P258
CleanEx:HS_RCC2 Genevestigator:Q9P258 GermOnline:ENSG00000179051
Uniprot:Q9P258
Length = 522
Score = 182 (69.1 bits), Expect = 4.9e-13, Sum P(3) = 4.9e-13
Identities = 44/134 (32%), Positives = 67/134 (50%)
Query: 295 ACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTV 354
+C HS ++T G L ++G GQ GHG T P L + A G HT+
Sbjct: 157 SCAA-HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTL 215
Query: 355 CISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDG 414
++ G V+ FG N+ GQLG G +Q + VP + + + ++CGA S ++ G
Sbjct: 216 ALTETGSVFAFGENKMGQLGLG-NQTDAVPSPAQI-MYNGQPITKMACGAEFSMIMDCKG 273
Query: 415 QVLSWGWNKYGQLG 428
+ S+G +YGQLG
Sbjct: 274 NLYSFGCPEYGQLG 287
Score = 180 (68.4 bits), Expect = 8.4e-13, Sum P(3) = 8.4e-13
Identities = 54/162 (33%), Positives = 80/162 (49%)
Query: 308 GALLTFG---WGLYG-------QCGHGSTNDQL-RPSYASSLMDIQVEQIAAGLW--HTV 354
G LL FG W L G Q + + L P L ++V + +G H++
Sbjct: 104 GQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLAGVRVRTVVSGSCAAHSL 163
Query: 355 CISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDG 414
I+ EG+++ +G N+ GQLG G + P+L+E L + +CG H+ LTE G
Sbjct: 164 LITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEG--LSHEVIVSAACGRNHTLALTETG 221
Query: 415 QVLSWGWNKYGQLGLGDSIDRNIPSLVPI--HGFLPRNIACG 454
V ++G NK GQLGLG+ D +PS I +G +ACG
Sbjct: 222 SVFAFGENKMGQLGLGNQTDA-VPSPAQIMYNGQPITKMACG 262
Score = 164 (62.8 bits), Expect = 5.0e-15, Sum P(3) = 5.0e-15
Identities = 46/179 (25%), Positives = 86/179 (48%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ---VEQIA 347
V+++ACG H+ V+ + ++G+G YG+ GH D++ P L D QI
Sbjct: 332 VRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVK-LFDFPGRGASQIY 390
Query: 348 AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHS 407
AG + +S G ++ +G + T PK ++ L R + ++CG + S
Sbjct: 391 AGYTCSFAVSEVGGLFFWGATNTSREST------MYPKAVQD--LCGWRIRSLACG-KSS 441
Query: 408 AVLTEDGQVLSWGWNK-YGQLGLGDSIDRNIPS---LVPIHGFLPRNIACGWWHTLLLA 462
++ D +SWG + +G+LG GD ++ + + + G +A G+ H+L++A
Sbjct: 442 IIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVIA 500
Score = 125 (49.1 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
Identities = 28/85 (32%), Positives = 47/85 (55%)
Query: 295 ACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ-VEQIAAGLWHT 353
ACG H+ +T+ G++ FG GQ G G+ D + PS A + + Q + ++A G +
Sbjct: 208 ACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDAV-PSPAQIMYNGQPITKMACGAEFS 266
Query: 354 VCISVEGRVYVFGGNQFGQLGTGVD 378
+ + +G +Y FG ++GQLG D
Sbjct: 267 MIMDCKGNLYSFGCPEYGQLGHNSD 291
Score = 119 (46.9 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 40/122 (32%), Positives = 60/122 (49%)
Query: 359 EGRVYVFGGNQFGQLG---TGVDQA--ENVPKLLETP----ILESKRAKVVSCG--ARHS 407
+G++ +FG + +G QA N+ + L P L R + V G A HS
Sbjct: 103 KGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLAGVRVRTVVSGSCAAHS 162
Query: 408 AVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP--IHGFLPRNIACGWWHTLLLAETT 465
++T +G++ SWG N+ GQLG GD+ P L+ H + + ACG HTL L ET
Sbjct: 163 LLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIV-SAACGRNHTLALTETG 221
Query: 466 QI 467
+
Sbjct: 222 SV 223
Score = 92 (37.4 bits), Expect = 5.0e-15, Sum P(3) = 5.0e-15
Identities = 24/78 (30%), Positives = 38/78 (48%)
Query: 53 KDVCGGGCG-FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
+ V G C +L + GKL +WG +++GQ K E P + +V AA
Sbjct: 151 RTVVSGSCAAHSLLITTEGKLWSWGR-NEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAAC 209
Query: 112 GWAHCVSVTEAGEVYTWG 129
G H +++TE G V+ +G
Sbjct: 210 GRNHTLALTETGSVFAFG 227
Score = 76 (31.8 bits), Expect = 2.4e-05, Sum P(3) = 2.4e-05
Identities = 30/128 (23%), Positives = 54/128 (42%)
Query: 287 GRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQI 346
GR +I G S V++ G L F WG + S + P L ++ +
Sbjct: 383 GRG-ASQIYAGYTCSFAVSEVGGL--FFWG----ATNTSRESTMYPKAVQDLCGWRIRSL 435
Query: 347 AAGLWHTVCISVEGRVYVFGGNQ-FGQLGTGVDQAENVPKLLETPILESKRAKVVSCGAR 405
A G ++ ++ + +G + FG+LG G + ++ E L+ ++ V+ G
Sbjct: 436 ACGK-SSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYS 494
Query: 406 HSAVLTED 413
HS V+ D
Sbjct: 495 HSLVIARD 502
Score = 72 (30.4 bits), Expect = 2.4e-05, Sum P(3) = 2.4e-05
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGS 325
+ ++ACG S ++ G L +FG YGQ GH S
Sbjct: 256 ITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNS 290
Score = 52 (23.4 bits), Expect = 4.9e-13, Sum P(3) = 4.9e-13
Identities = 9/22 (40%), Positives = 16/22 (72%)
Query: 440 LVPIHGFLPRNIACGWWHTLLL 461
++P+ + R++ACG HTL+L
Sbjct: 324 ILPVPNVVVRDVACGANHTLVL 345
Score = 48 (22.0 bits), Expect = 5.0e-15, Sum P(3) = 5.0e-15
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 210 PGVKITKVAAGGRHTLIL 227
P V + VA G HTL+L
Sbjct: 328 PNVVVRDVACGANHTLVL 345
Score = 48 (22.0 bits), Expect = 4.9e-13, Sum P(3) = 4.9e-13
Identities = 17/57 (29%), Positives = 27/57 (47%)
Query: 141 RDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDE 197
R +A ++++ S+G +A +A P KR G KR + S +SGDE
Sbjct: 3 RKKAAAAAWEEPSSGNGTA----RAGPR-KRGGPAGRKRERPERCSSSSGGGSSGDE 54
Score = 47 (21.6 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 105 SVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+VV + AH + +T G++++WG E
Sbjct: 152 TVVSGSCA-AHSLLITTEGKLWSWGRNE 178
Score = 43 (20.2 bits), Expect = 1.6e-14, Sum P(3) = 1.6e-14
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLIL 227
SP + N G ITK+A G ++I+
Sbjct: 245 SPAQIMYN-GQPITKMACGAEFSMIM 269
>MGI|MGI:1919784 [details] [associations]
symbol:Rcc2 "regulator of chromosome condensation 2"
species:10090 "Mus musculus" [GO:0000775 "chromosome, centromeric
region" evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0051301 "cell division"
evidence=IEA] MGI:MGI:1919784 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0000775 GO:GO:0005730 GO:GO:0051301
GO:GO:0007067 GO:GO:0005819 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0005874 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 EMBL:AL954710 eggNOG:COG5184
GeneTree:ENSGT00700000104160 CTD:55920 HOGENOM:HOG000232061
HOVERGEN:HBG080538 OMA:FGENKLG OrthoDB:EOG4DNF4B EMBL:AK076040
EMBL:BC086666 EMBL:AK129370 IPI:IPI00222509 RefSeq:NP_776292.1
UniGene:Mm.253 ProteinModelPortal:Q8BK67 SMR:Q8BK67 STRING:Q8BK67
PhosphoSite:Q8BK67 PaxDb:Q8BK67 PRIDE:Q8BK67
Ensembl:ENSMUST00000038893 Ensembl:ENSMUST00000071169 GeneID:108911
KEGG:mmu:108911 UCSC:uc008vna.2 InParanoid:A2AWQ3 ChiTaRS:RCC2
NextBio:361459 Bgee:Q8BK67 CleanEx:MM_RCC2 Genevestigator:Q8BK67
GermOnline:ENSMUSG00000040945 Uniprot:Q8BK67
Length = 520
Score = 186 (70.5 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 54/169 (31%), Positives = 85/169 (50%)
Query: 308 GALLTFG---WGLYG-------QCGHGSTNDQL-RPSYASSLMDIQVEQIAAGLW--HTV 354
G LL FG W L G Q + + L P L ++V + +G H++
Sbjct: 102 GQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVRVRTVVSGSCAAHSL 161
Query: 355 CISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDG 414
I+ EG+++ +G N+ GQLG G + P+L+E L + + +CG H+ LT+ G
Sbjct: 162 LITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEA--LSHEAIVLAACGRNHTLALTDTG 219
Query: 415 QVLSWGWNKYGQLGLGDSIDRNIPSLVPI--HGFLPRNIACGWWHTLLL 461
V ++G NK GQLGLG+ D +PS I +G +ACG ++L+
Sbjct: 220 SVFAFGENKMGQLGLGNQTDA-VPSPAQIMYNGQPITKMACGAEFSMLM 267
Score = 181 (68.8 bits), Expect = 4.0e-12, Sum P(3) = 4.0e-12
Identities = 48/146 (32%), Positives = 73/146 (50%)
Query: 283 SGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ 342
SG R+ V +C HS ++T G L ++G GQ GHG T P +L
Sbjct: 144 SGVRVRTVVSG-SCAA-HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEA 201
Query: 343 VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSC 402
+ A G HT+ ++ G V+ FG N+ GQLG G +Q + VP + + + ++C
Sbjct: 202 IVLAACGRNHTLALTDTGSVFAFGENKMGQLGLG-NQTDAVPSPAQI-MYNGQPITKMAC 259
Query: 403 GARHSAVLTEDGQVLSWGWNKYGQLG 428
GA S ++ G + S+G +YGQLG
Sbjct: 260 GAEFSMLMDCKGNLYSFGCPEYGQLG 285
Score = 163 (62.4 bits), Expect = 5.2e-15, Sum P(3) = 5.2e-15
Identities = 46/179 (25%), Positives = 86/179 (48%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ---VEQIA 347
V+++ACG H+ V+ + ++G+G YG+ GH D++ P L D QI
Sbjct: 330 VRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVK-LFDFPGRGATQIY 388
Query: 348 AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHS 407
AG + +S G ++ +G + T PK ++ L R + ++CG + S
Sbjct: 389 AGYTCSFAVSEVGGLFFWGATNTSREST------MYPKAVQD--LCGWRIRSLACG-KSS 439
Query: 408 AVLTEDGQVLSWGWNK-YGQLGLGDSIDRNIPS---LVPIHGFLPRNIACGWWHTLLLA 462
++ D +SWG + +G+LG GD ++ + + + G +A G+ H+L++A
Sbjct: 440 IIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVIA 498
Score = 129 (50.5 bits), Expect = 6.4e-07, Sum P(3) = 6.4e-07
Identities = 29/85 (34%), Positives = 47/85 (55%)
Query: 295 ACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ-VEQIAAGLWHT 353
ACG H+ +TD G++ FG GQ G G+ D + PS A + + Q + ++A G +
Sbjct: 206 ACGRNHTLALTDTGSVFAFGENKMGQLGLGNQTDAV-PSPAQIMYNGQPITKMACGAEFS 264
Query: 354 VCISVEGRVYVFGGNQFGQLGTGVD 378
+ + +G +Y FG ++GQLG D
Sbjct: 265 MLMDCKGNLYSFGCPEYGQLGHNSD 289
Score = 93 (37.8 bits), Expect = 5.2e-15, Sum P(3) = 5.2e-15
Identities = 23/78 (29%), Positives = 39/78 (50%)
Query: 53 KDVCGGGCG-FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
+ V G C +L + GKL +WG +++GQ K E P + ++V AA
Sbjct: 149 RTVVSGSCAAHSLLITTEGKLWSWGR-NEKGQLGHGDTKRVEAPRLIEALSHEAIVLAAC 207
Query: 112 GWAHCVSVTEAGEVYTWG 129
G H +++T+ G V+ +G
Sbjct: 208 GRNHTLALTDTGSVFAFG 225
Score = 75 (31.5 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
Identities = 30/128 (23%), Positives = 54/128 (42%)
Query: 287 GRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQI 346
GR +I G S V++ G L F WG + S + P L ++ +
Sbjct: 381 GRG-ATQIYAGYTCSFAVSEVGGL--FFWG----ATNTSRESTMYPKAVQDLCGWRIRSL 433
Query: 347 AAGLWHTVCISVEGRVYVFGGNQ-FGQLGTGVDQAENVPKLLETPILESKRAKVVSCGAR 405
A G ++ ++ + +G + FG+LG G + ++ E L+ ++ V+ G
Sbjct: 434 ACGK-SSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYS 492
Query: 406 HSAVLTED 413
HS V+ D
Sbjct: 493 HSLVIARD 500
Score = 70 (29.7 bits), Expect = 2.9e-05, Sum P(3) = 2.9e-05
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGS 325
+ ++ACG S ++ G L +FG YGQ GH S
Sbjct: 254 ITKMACGAEFSMLMDCKGNLYSFGCPEYGQLGHNS 288
Score = 52 (23.4 bits), Expect = 4.0e-12, Sum P(3) = 4.0e-12
Identities = 9/22 (40%), Positives = 16/22 (72%)
Query: 440 LVPIHGFLPRNIACGWWHTLLL 461
++P+ + R++ACG HTL+L
Sbjct: 322 ILPVPNVVVRDVACGANHTLVL 343
Score = 48 (22.0 bits), Expect = 5.2e-15, Sum P(3) = 5.2e-15
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 210 PGVKITKVAAGGRHTLIL 227
P V + VA G HTL+L
Sbjct: 326 PNVVVRDVACGANHTLVL 343
Score = 48 (22.0 bits), Expect = 2.4e-10, Sum P(3) = 2.4e-10
Identities = 25/107 (23%), Positives = 37/107 (34%)
Query: 183 SSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMXXXXXXXXXXXX 242
S R E GD +P L+ I A G HTL L+D
Sbjct: 171 SWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGSVFAFGENKMG 230
Query: 243 XXXXXSRIKMVPTPHLI-----PCLEHAASGKDRPLLVRQGSVNSSG 284
++ VP+P I P + A + L+ +G++ S G
Sbjct: 231 QLGLGNQTDAVPSPAQIMYNGQPITKMACGAEFSMLMDCKGNLYSFG 277
Score = 47 (21.6 bits), Expect = 2.4e-10, Sum P(3) = 2.4e-10
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 105 SVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+VV + AH + +T G++++WG E
Sbjct: 150 TVVSGSCA-AHSLLITTEGKLWSWGRNE 176
Score = 40 (19.1 bits), Expect = 4.0e-12, Sum P(3) = 4.0e-12
Identities = 12/36 (33%), Positives = 16/36 (44%)
Query: 162 TEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDE 197
T +A P +R G KR + S +SGDE
Sbjct: 18 TARAGPR-RRGGPAGRKRERPERCSSSSGGGSSGDE 52
>UNIPROTKB|C9JMJ4 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 IPI:IPI00925317
ProteinModelPortal:C9JMJ4 SMR:C9JMJ4 STRING:C9JMJ4
Ensembl:ENST00000419074 ArrayExpress:C9JMJ4 Bgee:C9JMJ4
Uniprot:C9JMJ4
Length = 272
Score = 199 (75.1 bits), Expect = 6.0e-15, P = 6.0e-15
Identities = 57/149 (38%), Positives = 85/149 (57%)
Query: 300 HSAVVTDAGALLTFGWGLYGQCGHG-STNDQLRPSYASSLMDIQVEQIAAGLWHTVCISV 358
H + T+ G +LT G G GQ G G + ++ +P+ S D+ V+ A G+ HTVC+S
Sbjct: 27 HRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDV-VQAEAGGM-HTVCLSK 84
Query: 359 EGRVYVFGGNQFGQLG--TGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQV 416
G+VY FG N G LG T V+ +E VP +E L+ K +V S G H+A LT+DG+V
Sbjct: 85 SGQVYSFGCNDEGALGRDTSVEGSEMVPGKVE---LQEKVVQV-SAGDSHTAALTDDGRV 140
Query: 417 LSWGW--NKYGQLGLGDSIDRNIPSLVPI 443
WG + G +GL + + + S+VP+
Sbjct: 141 FLWGSFRDNNGVIGLLEPMKK---SMVPV 166
Score = 120 (47.3 bits), Expect = 0.00013, P = 0.00013
Identities = 39/143 (27%), Positives = 69/143 (48%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST--NDQLRPSYASSLMDIQVEQIAA 348
V + GG H+ ++ +G + +FG G G ++ ++ P + +V Q++A
Sbjct: 69 VVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVE--LQEKVVQVSA 126
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI---LESKRAKVVSCGAR 405
G HT ++ +GRV+++G F + E + K + P+ L+ KV S G
Sbjct: 127 GDSHTAALTDDGRVFLWGS--FRDNNGVIGLLEPMKKSM-VPVQVQLDVPVVKVAS-GND 182
Query: 406 HSAVLTEDGQVLSWGWNKYGQLG 428
H +LT DG + + G + GQLG
Sbjct: 183 HLVMLTADGDLYTLGCGEQGQLG 205
Score = 119 (46.9 bits), Expect = 5.5e-09, Sum P(2) = 5.5e-09
Identities = 47/184 (25%), Positives = 85/184 (46%)
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAG-RSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
C + A G+D + +GS GK + V +++ G H+A +TD G + +G
Sbjct: 93 CNDEGALGRDTSV---EGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLWG-SFRD 148
Query: 320 QCGHGSTNDQLRPSYA--SSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGV 377
G + ++ S +D+ V ++A+G H V ++ +G +Y G + GQLG
Sbjct: 149 NNGVIGLLEPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVP 208
Query: 378 DQAEN------VPKLL--ETPILESK--RAKV----VSCGARHSAVLTEDGQVLSWGWNK 423
+ N + +LL + +L+S+ R V CGA + ++ +G V +G +
Sbjct: 209 ELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSN 268
Query: 424 YGQL 427
Y QL
Sbjct: 269 YHQL 272
Score = 82 (33.9 bits), Expect = 5.5e-09, Sum P(2) = 5.5e-09
Identities = 27/84 (32%), Positives = 44/84 (52%)
Query: 66 TSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
++E G ++T G D GQ L G++ E +P + VV+A AG H V ++++G+
Sbjct: 31 STEPGLVLTLGQGD-VGQ--LGLGENVMERKKPALVSIPEDVVQAEAGGMHTVCLSKSGQ 87
Query: 125 VYTWGWRECVPSAKVTRDFGSAGS 148
VY++G C + RD GS
Sbjct: 88 VYSFG---CNDEGALGRDTSVEGS 108
Score = 43 (20.2 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILS 228
P LV++ V + AGG HT+ LS
Sbjct: 60 PALVSIPEDV--VQAEAGGMHTVCLS 83
>MGI|MGI:1351630 [details] [associations]
symbol:Sergef "secretion regulating guanine nucleotide
exchange factor" species:10090 "Mus musculus" [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0005087 "Ran guanyl-nucleotide exchange factor activity"
evidence=ISA] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0050709 "negative regulation of
protein secretion" evidence=ISO] [GO:0050790 "regulation of
catalytic activity" evidence=ISA] InterPro:IPR027048
MGI:MGI:1351630 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0005730 GO:GO:0045111 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
eggNOG:COG5184 GeneTree:ENSGT00700000104160 CTD:26297
HOGENOM:HOG000154414 HOVERGEN:HBG051746 KO:K15421 OMA:NIWAPKP
OrthoDB:EOG4J1183 PANTHER:PTHR22870:SF7 EMBL:AJ243952 EMBL:AK145819
EMBL:AK147848 EMBL:BC049603 EMBL:BC119533 EMBL:BC119534
IPI:IPI00134816 RefSeq:NP_038817.1 UniGene:Mm.76659
ProteinModelPortal:Q80YD6 SMR:Q80YD6 STRING:Q80YD6 PRIDE:Q80YD6
Ensembl:ENSMUST00000033127 GeneID:27414 KEGG:mmu:27414
UCSC:uc009gyp.2 InParanoid:Q80YD6 NextBio:305446 Bgee:Q80YD6
Genevestigator:Q80YD6 GermOnline:ENSMUSG00000030839 Uniprot:Q80YD6
Length = 464
Score = 191 (72.3 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 49/133 (36%), Positives = 65/133 (48%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
+K + GG HSAVVTD G L G GQ G G T + LR + L + Q+A G
Sbjct: 51 IKSVTGGGGHSAVVTDGGDLFVCGLNKDGQLGLGHTEEVLRFTICKPLRGCPIRQVACGW 110
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETP-ILESKRAKVV--SCGARHS 407
T+ ++ +G+V G N FGQLG + P+ P +E R KVV + G RH+
Sbjct: 111 DFTIMLTEKGQVLSCGSNAFGQLGV-----PHGPRKCVVPQAIECLREKVVCVAAGLRHA 165
Query: 408 AVLTEDGQVLSWG 420
T G V WG
Sbjct: 166 LATTATGSVFQWG 178
Score = 185 (70.2 bits), Expect = 9.3e-15, Sum P(2) = 9.3e-15
Identities = 53/188 (28%), Positives = 90/188 (47%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCG--HGSTNDQLRPSYASSLMDIQVEQIAA 348
++++ACG + ++T+ G +L+ G +GQ G HG + P L + +V +AA
Sbjct: 103 IRQVACGWDFTIMLTEKGQVLSCGSNAFGQLGVPHGPRKCVV-PQAIECLRE-KVVCVAA 160
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL--ETPI----LESKRAKVVSC 402
GL H + + G V+ +G G + +N+P L + P LE+ A
Sbjct: 161 GLRHALATTATGSVFQWGTG-LASSGRRLCPGQNLPLFLTAKEPSRVTGLENSTAVCAVA 219
Query: 403 GARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIAC---GWWHTL 459
G+ HSA LT+ G++ WG NK+GQL ++ +P + H F + GW H +
Sbjct: 220 GSDHSASLTDTGELYVWGRNKHGQLA-SRAVFLPLPQRIEAHYFQDEKVTAVWSGWTHLV 278
Query: 460 LLAETTQI 467
ET ++
Sbjct: 279 AKTETGKV 286
Score = 165 (63.1 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 39/113 (34%), Positives = 61/113 (53%)
Query: 356 ISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQ 415
+S ++ +G N +GQLG G + +P+ L + ++ K V+ G HSAV+T+ G
Sbjct: 11 VSAAAVLFAWGANSYGQLGLGHKEDVFLPQQL-SDFCQAGCIKSVTGGGGHSAVVTDGGD 69
Query: 416 VLSWGWNKYGQLGLGDSID-RNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
+ G NK GQLGLG + + P+ G R +ACGW T++L E Q+
Sbjct: 70 LFVCGLNKDGQLGLGHTEEVLRFTICKPLRGCPIRQVACGWDFTIMLTEKGQV 122
Score = 163 (62.4 bits), Expect = 6.2e-09, P = 6.2e-09
Identities = 44/128 (34%), Positives = 62/128 (48%)
Query: 305 TDAGALLTFGWGL--YGQCGHGSTNDQLRPSYASSLMDIQ-VEQIAAGLWHTVCISVEGR 361
T + A + F WG YGQ G G D P S ++ + G H+ ++ G
Sbjct: 10 TVSAAAVLFAWGANSYGQLGLGHKEDVFLPQQLSDFCQAGCIKSVTGGGGHSAVVTDGGD 69
Query: 362 VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
++V G N+ GQLG G E V + L + V+CG + +LTE GQVLS G
Sbjct: 70 LFVCGLNKDGQLGLG--HTEEVLRFTICKPLRGCPIRQVACGWDFTIMLTEKGQVLSCGS 127
Query: 422 NKYGQLGL 429
N +GQLG+
Sbjct: 128 NAFGQLGV 135
Score = 158 (60.7 bits), Expect = 5.5e-12, Sum P(2) = 5.5e-12
Identities = 57/217 (26%), Positives = 97/217 (44%)
Query: 268 GKDRPL-LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST 326
G++ PL L + +G + V +A G HSA +TD G L +G +GQ +
Sbjct: 191 GQNLPLFLTAKEPSRVTGLENSTAVCAVA-GSDHSASLTDTGELYVWGRNKHGQLASRAV 249
Query: 327 NDQLRPSY-ASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG--------- 376
L A D +V + +G H V + G+V+ +G +GQLG
Sbjct: 250 FLPLPQRIEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQLGRRLEPPEAQKP 309
Query: 377 VDQAENV----PK-LLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD 431
V+Q ++ P+ + +P+ A +SCG+ H+ + D + SWGWN++G G D
Sbjct: 310 VEQDSSLAFQGPQNSVPSPLHCLTGATEISCGSEHNLAVIRD-KCCSWGWNEHGMCG--D 366
Query: 432 SIDRNIPSLVPIHGFLPRN-----IACGWWHTLLLAE 463
+ N+ + P+ P + CG H+L + +
Sbjct: 367 GTESNVWTPTPVQALPPSPSRLLLVGCGAGHSLAVCQ 403
Score = 140 (54.3 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 42/148 (28%), Positives = 64/148 (43%)
Query: 288 RSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL-------RPSYASSLMD 340
R V +A G RH+ T G++ +G GL L PS + L +
Sbjct: 152 REKVVCVAAGLRHALATTATGSVFQWGTGLASSGRRLCPGQNLPLFLTAKEPSRVTGLEN 211
Query: 341 IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVV 400
AG H+ ++ G +YV+G N+ GQL + +P+ +E + ++ V
Sbjct: 212 STAVCAVAGSDHSASLTDTGELYVWGRNKHGQLASRAVFLP-LPQRIEAHYFQDEKVTAV 270
Query: 401 SCGARHSAVLTEDGQVLSWGWNKYGQLG 428
G H TE G+V +WG YGQLG
Sbjct: 271 WSGWTHLVAKTETGKVFTWGRADYGQLG 298
Score = 77 (32.2 bits), Expect = 5.5e-12, Sum P(2) = 5.5e-12
Identities = 23/73 (31%), Positives = 36/73 (49%)
Query: 60 CG--FALATSESGKLITWGSADDEGQSYLTSG-KHGETPEPFPLPTEASVVKAAAGWAHC 116
CG F + +E G++++ GS + GQ + G + P+ E VV AAG H
Sbjct: 108 CGWDFTIMLTEKGQVLSCGS-NAFGQLGVPHGPRKCVVPQAIECLRE-KVVCVAAGLRHA 165
Query: 117 VSVTEAGEVYTWG 129
++ T G V+ WG
Sbjct: 166 LATTATGSVFQWG 178
Score = 74 (31.1 bits), Expect = 9.3e-15, Sum P(2) = 9.3e-15
Identities = 33/116 (28%), Positives = 48/116 (41%)
Query: 21 VVYMWG---YLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWG 76
V++ WG Y G ++ L + C K V GGG G + ++ G L G
Sbjct: 16 VLFAWGANSYGQLGLGHKEDVFLPQQLSDFCQAGCIKSVTGGG-GHSAVVTDGGDLFVCG 74
Query: 77 SADDEGQSYLTSGKHGETPEPFPL--PTEASVVK-AAAGWAHCVSVTEAGEVYTWG 129
D GQ L G H E F + P ++ A GW + +TE G+V + G
Sbjct: 75 LNKD-GQ--LGLG-HTEEVLRFTICKPLRGCPIRQVACGWDFTIMLTEKGQVLSCG 126
>UNIPROTKB|Q74DR4 [details] [associations]
symbol:GSU1251 "ATS1 domain repeat protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
Gene3D:2.60.40.360 InterPro:IPR008962 InterPro:IPR011040
SUPFAM:SSF50939 RefSeq:NP_952304.1 ProteinModelPortal:Q74DR4
GeneID:2688149 KEGG:gsu:GSU1251 PATRIC:22025273
HOGENOM:HOG000144307 OMA:QADGTLW
BioCyc:GSUL243231:GH27-1279-MONOMER Uniprot:Q74DR4
Length = 2082
Score = 191 (72.3 bits), Expect = 3.5e-12, Sum P(3) = 3.5e-12
Identities = 54/167 (32%), Positives = 79/167 (47%)
Query: 287 GRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQI 346
GR YV +A GG H+ + G L +G L GQ G G T P+ D I
Sbjct: 189 GR-YVA-VAAGGEHALALQADGTLWAWGANLTGQLGTGGTGILPNPTPLKIGTDRDWTAI 246
Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD-QAENVPKLLETPILESKRAKVVSCGAR 405
+AG H+V + +G ++ +G N FG+LG GV NV T + ++ GA
Sbjct: 247 SAGEMHSVALKADGSLWSWGQNLFGELGNGVALPGANVTT--PTRVGTGSDWVAIAAGAL 304
Query: 406 HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIA 452
H+ L +G V +WG N G +G G +R+ P+L+ L N+A
Sbjct: 305 HTVALHRNGTVSAWGNNAQGAVGDGTVANRSTPTLIVAPVTLVNNVA 351
Score = 184 (69.8 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 61/208 (29%), Positives = 92/208 (44%)
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
P + A+ ++ P + S S+ S+V IA G H + G L +G G
Sbjct: 598 PAMLTPATQRNVPAQLAVASPPSTA-FNSSWVA-IAAGQDHGLSLQADGTLWAWGANSVG 655
Query: 320 QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG--- 376
Q G+G T P + + +AAG H++ +G ++ +G N GQLGTG
Sbjct: 656 QLGNGVTTATFTPVQVINAEGVPYVSLAAGTSHSLAGRSDGTLWAWGNNTSGQLGTGPHP 715
Query: 377 --VD----QAENVPK--LLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLG 428
D Q VP L P+ + V + G HSA L +G + +WG N GQLG
Sbjct: 716 GDADPLNPQPHTVPARILTSNPVSAADDWLVATAGGSHSAALKSNGTLWTWGQNTSGQLG 775
Query: 429 LGDSIDRNIPS--LVPIHGFLPRNIACG 454
G + + +IP+ L P P ++A G
Sbjct: 776 NGTTTEADIPTALLEPRISVSPASLAFG 803
Score = 173 (66.0 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 55/180 (30%), Positives = 78/180 (43%)
Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQ 345
AG S V +A GG H + G L G +GQ G G+ ++ P +
Sbjct: 29 AGWSAVPHVAAGGNHVLTLRSDGTLWAAGSNQFGQLGDGTGINRTSPVQVPGTW----KT 84
Query: 346 IAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLETPILESKRAKVVSCGA 404
+AAG H++ I +G ++ +G N FGQLG + + K I VS G
Sbjct: 85 VAAGTTHSLGIKADGSLWAWGSNLFGQLGQPLVNGQLATNKFSPIRIGTGNDWVAVSAGE 144
Query: 405 RHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV---PIHGFLPRNIACGWWHTLLL 461
S L DG + SWG N +G+LG G ++ R P V P+ +A G H L L
Sbjct: 145 LTSFGLKGDGTLWSWGNNLFGELGDGTTVSRPQPVQVVADPLSNGRYVAVAAGGEHALAL 204
Score = 171 (65.3 bits), Expect = 6.4e-09, P = 6.4e-09
Identities = 76/279 (27%), Positives = 115/279 (41%)
Query: 214 ITKVAAGGRHTLILSDMXXXXXXXXXXXXXXXXXSRIKMVPTPHLIP-CLEHAASGKDRP 272
+ VAAGG H L L + I +P +P + A+G
Sbjct: 34 VPHVAAGGNHVLTLRSDGTLWAAGSNQFGQLGDGTGINRT-SPVQVPGTWKTVAAGTTHS 92
Query: 273 LLVR-QGSV-----NSSGKAGRSYVK---------EIACGGRHSAVVTDAGALLTFG--- 314
L ++ GS+ N G+ G+ V I G + V AG L +FG
Sbjct: 93 LGIKADGSLWAWGSNLFGQLGQPLVNGQLATNKFSPIRIGTGNDWVAVSAGELTSFGLKG 152
Query: 315 ------WG--LYGQCGHGSTNDQLRPSY--ASSLMDIQVEQIAAGLWHTVCISVEGRVYV 364
WG L+G+ G G+T + +P A L + + +AAG H + + +G ++
Sbjct: 153 DGTLWSWGNNLFGELGDGTTVSRPQPVQVVADPLSNGRYVAVAAGGEHALALQADGTLWA 212
Query: 365 FGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKY 424
+G N GQLGTG +P I + +S G HS L DG + SWG N +
Sbjct: 213 WGANLTGQLGTGGTGI--LPNPTPLKIGTDRDWTAISAGEMHSVALKADGSLWSWGQNLF 270
Query: 425 GQLGLGDSID-RNIPSLVPIH-GFLPRNIACGWWHTLLL 461
G+LG G ++ N+ + + G IA G HT+ L
Sbjct: 271 GELGNGVALPGANVTTPTRVGTGSDWVAIAAGALHTVAL 309
Score = 160 (61.4 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 50/172 (29%), Positives = 68/172 (39%)
Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQ 345
AG S + GG S + G L +G GQ G G+T P
Sbjct: 395 AGASAWLGVEPGGAFSLGLRSNGTLWAWGGNASGQLGDGTTTPSAIPVPVVGGAG-NWRT 453
Query: 346 IAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET--PILESKRAKVVSCG 403
A G H+V + +G ++ +G N GQLG G A + P+ + P V+ G
Sbjct: 454 TATGTAHSVAVRADGTLWAWGDNSSGQLGIGSTVAASTPQQITVTNPASAGNDWTAVAGG 513
Query: 404 ARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGW 455
HS L DG + SWG N +GQLG G + + G P N W
Sbjct: 514 GAHSLGLKADGTLWSWGDNTFGQLGDGTGTSNRTTPVQIVTGN-PGNFDRNW 564
Score = 145 (56.1 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 42/153 (27%), Positives = 69/153 (45%)
Query: 294 IACGGRHSAVVTDAGALLTFGWGLYG--QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW 351
IA G S V G + FGWG G Q G+G+ P+ S+ + G +
Sbjct: 352 IAAGTGVSFSVLANGTV--FGWGGNGAGQLGNGTFGAVTAPTVLSAGASAWLGVEPGGAF 409
Query: 352 HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESK-RAKVVSCGARHSAVL 410
++ + G ++ +GGN GQLG G P + P++ + + G HS +
Sbjct: 410 -SLGLRSNGTLWAWGGNASGQLGDGT----TTPSAIPVPVVGGAGNWRTTATGTAHSVAV 464
Query: 411 TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
DG + +WG N GQLG+G ++ + P + +
Sbjct: 465 RADGTLWAWGDNSSGQLGIGSTVAASTPQQITV 497
Score = 133 (51.9 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 46/161 (28%), Positives = 67/161 (41%)
Query: 295 ACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQ----IAAGL 350
A G HS V G L +G GQ G GST P + +A G
Sbjct: 455 ATGTAHSVAVRADGTLWAWGDNSSGQLGIGSTVAASTPQQITVTNPASAGNDWTAVAGGG 514
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV-PKLLET--PILESKRAKVVSCGARHS 407
H++ + +G ++ +G N FGQLG G + P + T P + V+ G S
Sbjct: 515 AHSLGLKADGTLWSWGDNTFGQLGDGTGTSNRTTPVQIVTGNPGNFDRNWVAVAAGGVFS 574
Query: 408 AVLTEDGQVLSWGWNKYGQLG-----LGDSIDRNIPSLVPI 443
L DG + +WG N QLG L + RN+P+ + +
Sbjct: 575 LALQADGTIWTWGDNSLLQLGTDPAMLTPATQRNVPAQLAV 615
Score = 92 (37.4 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 34/109 (31%), Positives = 50/109 (45%)
Query: 24 MWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEG 82
++G L GT+ + + + L G + V GG ALA G L WG A+ G
Sbjct: 163 LFGELGDGTTVSRPQPVQVVADPLSNG-RYVAVAAGG-EHALALQADGTLWAWG-ANLTG 219
Query: 83 QSYLTSGKHGETPEPFPLP--TEASVVKAAAGWAHCVSVTEAGEVYTWG 129
Q L +G G P P PL T+ +AG H V++ G +++WG
Sbjct: 220 Q--LGTGGTGILPNPTPLKIGTDRDWTAISAGEMHSVALKADGSLWSWG 266
Score = 92 (37.4 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 29/114 (25%), Positives = 47/114 (41%)
Query: 22 VYMWG-YLPGTSPEKSPILSPIPARLCGG-DSWKDVCGGGCGFALATSESGKLITWGSAD 79
++ WG G + + S IP + GG +W+ G ++A G L WG +
Sbjct: 419 LWAWGGNASGQLGDGTTTPSAIPVPVVGGAGNWRTTATG-TAHSVAVRADGTLWAWGD-N 476
Query: 80 DEGQSYLTSGKHGETPEPFPLPTEASV----VKAAAGWAHCVSVTEAGEVYTWG 129
GQ + S TP+ + AS A G AH + + G +++WG
Sbjct: 477 SSGQLGIGSTVAASTPQQITVTNPASAGNDWTAVAGGGAHSLGLKADGTLWSWG 530
Score = 91 (37.1 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 28/85 (32%), Positives = 36/85 (42%)
Query: 48 GGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVV 107
G +W V GG F+L +G L WG + GQ L G TP P+P
Sbjct: 396 GASAWLGVEPGGA-FSLGLRSNGTLWAWGG-NASGQ--LGDGT--TTPSAIPVPVVGGAG 449
Query: 108 K---AAAGWAHCVSVTEAGEVYTWG 129
A G AH V+V G ++ WG
Sbjct: 450 NWRTTATGTAHSVAVRADGTLWAWG 474
Score = 73 (30.8 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 24/92 (26%), Positives = 37/92 (40%)
Query: 40 SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSA--DDEGQSYLTSGKHGETPEP 97
+P P ++ W + G ++A G L +WG + G G + TP
Sbjct: 231 NPTPLKIGTDRDWTAISAGEM-HSVALKADGSLWSWGQNLFGELGNGVALPGANVTTPTR 289
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ T + V AAG H V++ G V WG
Sbjct: 290 --VGTGSDWVAIAAGALHTVALHRNGTVSAWG 319
Score = 70 (29.7 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 24/88 (27%), Positives = 36/88 (40%)
Query: 43 PARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP- 101
P R+ G W + G +A +G + WG+ + +G + + TP P
Sbjct: 287 PTRVGTGSDWVAIAAGAL-HTVALHRNGTVSAWGN-NAQGAVGDGTVANRSTPTLIVAPV 344
Query: 102 TEASVVKAAAGWAHCVSVTEAGEVYTWG 129
T + V AAG SV G V+ WG
Sbjct: 345 TLVNNVAIAAGTGVSFSVLANGTVFGWG 372
Score = 65 (27.9 bits), Expect = 3.5e-12, Sum P(3) = 3.5e-12
Identities = 25/93 (26%), Positives = 36/93 (38%)
Query: 38 ILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDE-GQSYLTSGKHGETPE 96
IL+ + A G + V GG L G L W + ++ GQ L G
Sbjct: 20 ILATLGAPAAGWSAVPHVAAGG-NHVLTLRSDGTL--WAAGSNQFGQ--LGDGTGINRTS 74
Query: 97 PFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P +P V AAG H + + G ++ WG
Sbjct: 75 PVQVPGTWKTV--AAGTTHSLGIKADGSLWAWG 105
Score = 40 (19.1 bits), Expect = 3.5e-12, Sum P(3) = 3.5e-12
Identities = 11/27 (40%), Positives = 13/27 (48%)
Query: 203 PCLVTLNP--GVKITKVAAGGRHTLIL 227
P V +P + VAAGG H L L
Sbjct: 178 PVQVVADPLSNGRYVAVAAGGEHALAL 204
>TIGR_CMR|GSU_1251 [details] [associations]
symbol:GSU_1251 "BNR repeat domain protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
Gene3D:2.60.40.360 InterPro:IPR008962 InterPro:IPR011040
SUPFAM:SSF50939 RefSeq:NP_952304.1 ProteinModelPortal:Q74DR4
GeneID:2688149 KEGG:gsu:GSU1251 PATRIC:22025273
HOGENOM:HOG000144307 OMA:QADGTLW
BioCyc:GSUL243231:GH27-1279-MONOMER Uniprot:Q74DR4
Length = 2082
Score = 191 (72.3 bits), Expect = 3.5e-12, Sum P(3) = 3.5e-12
Identities = 54/167 (32%), Positives = 79/167 (47%)
Query: 287 GRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQI 346
GR YV +A GG H+ + G L +G L GQ G G T P+ D I
Sbjct: 189 GR-YVA-VAAGGEHALALQADGTLWAWGANLTGQLGTGGTGILPNPTPLKIGTDRDWTAI 246
Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD-QAENVPKLLETPILESKRAKVVSCGAR 405
+AG H+V + +G ++ +G N FG+LG GV NV T + ++ GA
Sbjct: 247 SAGEMHSVALKADGSLWSWGQNLFGELGNGVALPGANVTT--PTRVGTGSDWVAIAAGAL 304
Query: 406 HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIA 452
H+ L +G V +WG N G +G G +R+ P+L+ L N+A
Sbjct: 305 HTVALHRNGTVSAWGNNAQGAVGDGTVANRSTPTLIVAPVTLVNNVA 351
Score = 184 (69.8 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 61/208 (29%), Positives = 92/208 (44%)
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
P + A+ ++ P + S S+ S+V IA G H + G L +G G
Sbjct: 598 PAMLTPATQRNVPAQLAVASPPSTA-FNSSWVA-IAAGQDHGLSLQADGTLWAWGANSVG 655
Query: 320 QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG--- 376
Q G+G T P + + +AAG H++ +G ++ +G N GQLGTG
Sbjct: 656 QLGNGVTTATFTPVQVINAEGVPYVSLAAGTSHSLAGRSDGTLWAWGNNTSGQLGTGPHP 715
Query: 377 --VD----QAENVPK--LLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLG 428
D Q VP L P+ + V + G HSA L +G + +WG N GQLG
Sbjct: 716 GDADPLNPQPHTVPARILTSNPVSAADDWLVATAGGSHSAALKSNGTLWTWGQNTSGQLG 775
Query: 429 LGDSIDRNIPS--LVPIHGFLPRNIACG 454
G + + +IP+ L P P ++A G
Sbjct: 776 NGTTTEADIPTALLEPRISVSPASLAFG 803
Score = 173 (66.0 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 55/180 (30%), Positives = 78/180 (43%)
Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQ 345
AG S V +A GG H + G L G +GQ G G+ ++ P +
Sbjct: 29 AGWSAVPHVAAGGNHVLTLRSDGTLWAAGSNQFGQLGDGTGINRTSPVQVPGTW----KT 84
Query: 346 IAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP-KLLETPILESKRAKVVSCGA 404
+AAG H++ I +G ++ +G N FGQLG + + K I VS G
Sbjct: 85 VAAGTTHSLGIKADGSLWAWGSNLFGQLGQPLVNGQLATNKFSPIRIGTGNDWVAVSAGE 144
Query: 405 RHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV---PIHGFLPRNIACGWWHTLLL 461
S L DG + SWG N +G+LG G ++ R P V P+ +A G H L L
Sbjct: 145 LTSFGLKGDGTLWSWGNNLFGELGDGTTVSRPQPVQVVADPLSNGRYVAVAAGGEHALAL 204
Score = 171 (65.3 bits), Expect = 6.4e-09, P = 6.4e-09
Identities = 76/279 (27%), Positives = 115/279 (41%)
Query: 214 ITKVAAGGRHTLILSDMXXXXXXXXXXXXXXXXXSRIKMVPTPHLIP-CLEHAASGKDRP 272
+ VAAGG H L L + I +P +P + A+G
Sbjct: 34 VPHVAAGGNHVLTLRSDGTLWAAGSNQFGQLGDGTGINRT-SPVQVPGTWKTVAAGTTHS 92
Query: 273 LLVR-QGSV-----NSSGKAGRSYVK---------EIACGGRHSAVVTDAGALLTFG--- 314
L ++ GS+ N G+ G+ V I G + V AG L +FG
Sbjct: 93 LGIKADGSLWAWGSNLFGQLGQPLVNGQLATNKFSPIRIGTGNDWVAVSAGELTSFGLKG 152
Query: 315 ------WG--LYGQCGHGSTNDQLRPSY--ASSLMDIQVEQIAAGLWHTVCISVEGRVYV 364
WG L+G+ G G+T + +P A L + + +AAG H + + +G ++
Sbjct: 153 DGTLWSWGNNLFGELGDGTTVSRPQPVQVVADPLSNGRYVAVAAGGEHALALQADGTLWA 212
Query: 365 FGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKY 424
+G N GQLGTG +P I + +S G HS L DG + SWG N +
Sbjct: 213 WGANLTGQLGTGGTGI--LPNPTPLKIGTDRDWTAISAGEMHSVALKADGSLWSWGQNLF 270
Query: 425 GQLGLGDSID-RNIPSLVPIH-GFLPRNIACGWWHTLLL 461
G+LG G ++ N+ + + G IA G HT+ L
Sbjct: 271 GELGNGVALPGANVTTPTRVGTGSDWVAIAAGALHTVAL 309
Score = 160 (61.4 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 50/172 (29%), Positives = 68/172 (39%)
Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQ 345
AG S + GG S + G L +G GQ G G+T P
Sbjct: 395 AGASAWLGVEPGGAFSLGLRSNGTLWAWGGNASGQLGDGTTTPSAIPVPVVGGAG-NWRT 453
Query: 346 IAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET--PILESKRAKVVSCG 403
A G H+V + +G ++ +G N GQLG G A + P+ + P V+ G
Sbjct: 454 TATGTAHSVAVRADGTLWAWGDNSSGQLGIGSTVAASTPQQITVTNPASAGNDWTAVAGG 513
Query: 404 ARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGW 455
HS L DG + SWG N +GQLG G + + G P N W
Sbjct: 514 GAHSLGLKADGTLWSWGDNTFGQLGDGTGTSNRTTPVQIVTGN-PGNFDRNW 564
Score = 145 (56.1 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 42/153 (27%), Positives = 69/153 (45%)
Query: 294 IACGGRHSAVVTDAGALLTFGWGLYG--QCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW 351
IA G S V G + FGWG G Q G+G+ P+ S+ + G +
Sbjct: 352 IAAGTGVSFSVLANGTV--FGWGGNGAGQLGNGTFGAVTAPTVLSAGASAWLGVEPGGAF 409
Query: 352 HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESK-RAKVVSCGARHSAVL 410
++ + G ++ +GGN GQLG G P + P++ + + G HS +
Sbjct: 410 -SLGLRSNGTLWAWGGNASGQLGDGT----TTPSAIPVPVVGGAGNWRTTATGTAHSVAV 464
Query: 411 TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
DG + +WG N GQLG+G ++ + P + +
Sbjct: 465 RADGTLWAWGDNSSGQLGIGSTVAASTPQQITV 497
Score = 133 (51.9 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 46/161 (28%), Positives = 67/161 (41%)
Query: 295 ACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQ----IAAGL 350
A G HS V G L +G GQ G GST P + +A G
Sbjct: 455 ATGTAHSVAVRADGTLWAWGDNSSGQLGIGSTVAASTPQQITVTNPASAGNDWTAVAGGG 514
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV-PKLLET--PILESKRAKVVSCGARHS 407
H++ + +G ++ +G N FGQLG G + P + T P + V+ G S
Sbjct: 515 AHSLGLKADGTLWSWGDNTFGQLGDGTGTSNRTTPVQIVTGNPGNFDRNWVAVAAGGVFS 574
Query: 408 AVLTEDGQVLSWGWNKYGQLG-----LGDSIDRNIPSLVPI 443
L DG + +WG N QLG L + RN+P+ + +
Sbjct: 575 LALQADGTIWTWGDNSLLQLGTDPAMLTPATQRNVPAQLAV 615
Score = 92 (37.4 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 34/109 (31%), Positives = 50/109 (45%)
Query: 24 MWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEG 82
++G L GT+ + + + L G + V GG ALA G L WG A+ G
Sbjct: 163 LFGELGDGTTVSRPQPVQVVADPLSNG-RYVAVAAGG-EHALALQADGTLWAWG-ANLTG 219
Query: 83 QSYLTSGKHGETPEPFPLP--TEASVVKAAAGWAHCVSVTEAGEVYTWG 129
Q L +G G P P PL T+ +AG H V++ G +++WG
Sbjct: 220 Q--LGTGGTGILPNPTPLKIGTDRDWTAISAGEMHSVALKADGSLWSWG 266
Score = 92 (37.4 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 29/114 (25%), Positives = 47/114 (41%)
Query: 22 VYMWG-YLPGTSPEKSPILSPIPARLCGG-DSWKDVCGGGCGFALATSESGKLITWGSAD 79
++ WG G + + S IP + GG +W+ G ++A G L WG +
Sbjct: 419 LWAWGGNASGQLGDGTTTPSAIPVPVVGGAGNWRTTATG-TAHSVAVRADGTLWAWGD-N 476
Query: 80 DEGQSYLTSGKHGETPEPFPLPTEASV----VKAAAGWAHCVSVTEAGEVYTWG 129
GQ + S TP+ + AS A G AH + + G +++WG
Sbjct: 477 SSGQLGIGSTVAASTPQQITVTNPASAGNDWTAVAGGGAHSLGLKADGTLWSWG 530
Score = 91 (37.1 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 28/85 (32%), Positives = 36/85 (42%)
Query: 48 GGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVV 107
G +W V GG F+L +G L WG + GQ L G TP P+P
Sbjct: 396 GASAWLGVEPGGA-FSLGLRSNGTLWAWGG-NASGQ--LGDGT--TTPSAIPVPVVGGAG 449
Query: 108 K---AAAGWAHCVSVTEAGEVYTWG 129
A G AH V+V G ++ WG
Sbjct: 450 NWRTTATGTAHSVAVRADGTLWAWG 474
Score = 73 (30.8 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 24/92 (26%), Positives = 37/92 (40%)
Query: 40 SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSA--DDEGQSYLTSGKHGETPEP 97
+P P ++ W + G ++A G L +WG + G G + TP
Sbjct: 231 NPTPLKIGTDRDWTAISAGEM-HSVALKADGSLWSWGQNLFGELGNGVALPGANVTTPTR 289
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ T + V AAG H V++ G V WG
Sbjct: 290 --VGTGSDWVAIAAGALHTVALHRNGTVSAWG 319
Score = 70 (29.7 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 24/88 (27%), Positives = 36/88 (40%)
Query: 43 PARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP- 101
P R+ G W + G +A +G + WG+ + +G + + TP P
Sbjct: 287 PTRVGTGSDWVAIAAGAL-HTVALHRNGTVSAWGN-NAQGAVGDGTVANRSTPTLIVAPV 344
Query: 102 TEASVVKAAAGWAHCVSVTEAGEVYTWG 129
T + V AAG SV G V+ WG
Sbjct: 345 TLVNNVAIAAGTGVSFSVLANGTVFGWG 372
Score = 65 (27.9 bits), Expect = 3.5e-12, Sum P(3) = 3.5e-12
Identities = 25/93 (26%), Positives = 36/93 (38%)
Query: 38 ILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDE-GQSYLTSGKHGETPE 96
IL+ + A G + V GG L G L W + ++ GQ L G
Sbjct: 20 ILATLGAPAAGWSAVPHVAAGG-NHVLTLRSDGTL--WAAGSNQFGQ--LGDGTGINRTS 74
Query: 97 PFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P +P V AAG H + + G ++ WG
Sbjct: 75 PVQVPGTWKTV--AAGTTHSLGIKADGSLWAWG 105
Score = 40 (19.1 bits), Expect = 3.5e-12, Sum P(3) = 3.5e-12
Identities = 11/27 (40%), Positives = 13/27 (48%)
Query: 203 PCLVTLNP--GVKITKVAAGGRHTLIL 227
P V +P + VAAGG H L L
Sbjct: 178 PVQVVADPLSNGRYVAVAAGGEHALAL 204
>UNIPROTKB|F1NXI7 [details] [associations]
symbol:SERGEF "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0050709 "negative regulation of protein
secretion" evidence=IEA] InterPro:IPR027048 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104160 PANTHER:PTHR22870:SF7
EMBL:AADN02030419 EMBL:AADN02030421 EMBL:AADN02030420
IPI:IPI00587804 Ensembl:ENSGALT00000010065 Uniprot:F1NXI7
Length = 231
Score = 192 (72.6 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 51/132 (38%), Positives = 66/132 (50%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
+K IA GG HSAV+T AG L G GQ G T D L + ++L V+++A G
Sbjct: 52 IKSIAGGGGHSAVITGAGELFVCGHNKAGQLGLNHTEDVLCFTLCTALSGFCVQEVACGW 111
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVV--SCGARHSA 408
T+ + G V G N FGQLG V Q P L+ I +S + K V + G RH+
Sbjct: 112 DFTIILGRAGLVLSCGSNAFGQLG--VPQISG-PCLIPQKIKQSLKEKAVGIAAGLRHAL 168
Query: 409 VLTEDGQVLSWG 420
TE G V WG
Sbjct: 169 AATESGLVFQWG 180
Score = 158 (60.7 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 37/97 (38%), Positives = 55/97 (56%)
Query: 366 GGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYG 425
G N +GQLG G + VP+LL+ + + K ++ G HSAV+T G++ G NK G
Sbjct: 21 GANSYGQLGLGHKEDVLVPQLLKDVSCKCQDIKSIAGGGGHSAVITGAGELFVCGHNKAG 80
Query: 426 QLGLGDSIDRNIPSL-VPIHGFLPRNIACGWWHTLLL 461
QLGL + D +L + GF + +ACGW T++L
Sbjct: 81 QLGLNHTEDVLCFTLCTALSGFCVQEVACGWDFTIIL 117
>UNIPROTKB|Q96I51 [details] [associations]
symbol:WBSCR16 "Williams-Beuren syndrome chromosomal region
16 protein" species:9606 "Homo sapiens" [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 Orphanet:904 MIM:194050
EMBL:AF410455 EMBL:AL136804 EMBL:CH471292 EMBL:BC007823
EMBL:BC019008 IPI:IPI00305992 RefSeq:NP_110425.1 UniGene:Hs.723684
ProteinModelPortal:Q96I51 SMR:Q96I51 IntAct:Q96I51 STRING:Q96I51
PhosphoSite:Q96I51 DMDM:116242843 PaxDb:Q96I51 PeptideAtlas:Q96I51
PRIDE:Q96I51 DNASU:81554 Ensembl:ENST00000329959 GeneID:81554
KEGG:hsa:81554 UCSC:uc003ubr.3 CTD:81554 GeneCards:GC07M074456
HGNC:HGNC:14948 neXtProt:NX_Q96I51 PharmGKB:PA37941
HOGENOM:HOG000232125 HOVERGEN:HBG054246 InParanoid:Q96I51
OMA:MVTLAKS OrthoDB:EOG4F1X33 PhylomeDB:Q96I51 ChiTaRS:WBSCR16
GenomeRNAi:81554 NextBio:71806 ArrayExpress:Q96I51 Bgee:Q96I51
CleanEx:HS_WBSCR16 Genevestigator:Q96I51 GermOnline:ENSG00000174374
Uniprot:Q96I51
Length = 464
Score = 192 (72.6 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 49/155 (31%), Positives = 78/155 (50%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPS-YASSLMDIQVEQIAAG 349
V ++ACG HS +TD G + + GWG GQ G G N P+ L + V Q+A
Sbjct: 232 VVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSSPTKLGGDLAGVNVIQVATY 291
Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGARHSA 408
+ +S +G ++ +G +++ QL + D + NVP+ L + R +CG A
Sbjct: 292 GDCCLAVSADGGLFGWGNSEYLQLASVTDSTQVNVPRCLHFSGVGKVRQ--AACGGTGCA 349
Query: 409 VLTEDGQVLSWGWNKYGQLGLGDS-IDRNIPSLVP 442
VL +G V WG YG LG G + ++ +P ++P
Sbjct: 350 VLNGEGHVFVWG---YGILGKGPNLVESAVPEMIP 381
Score = 172 (65.6 bits), Expect = 5.0e-12, Sum P(2) = 5.0e-12
Identities = 53/170 (31%), Positives = 80/170 (47%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL-RPSYASSLM---DIQVEQI 346
V +++CG HS V+TD + + G YGQCG +++ S+ M D QV Q+
Sbjct: 176 VLQVSCGRAHSLVLTDREGVFSMGNNSYGQCGRKVVENEIYSESHRVHRMQDFDGQVVQV 235
Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
A G H++ ++ +G VY G GQ G G + P L + +V + G
Sbjct: 236 ACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSSPTKLGGDLAGVNVIQVATYGDCC 295
Query: 407 SAVLTEDGQVLSWGWNKYGQLG-LGDSIDRNIPSLVPIHGF-LPRNIACG 454
AV + DG + WG ++Y QL + DS N+P + G R ACG
Sbjct: 296 LAV-SADGGLFGWGNSEYLQLASVTDSTQVNVPRCLHFSGVGKVRQAACG 344
Score = 156 (60.0 bits), Expect = 7.9e-11, Sum P(2) = 7.9e-11
Identities = 56/189 (29%), Positives = 88/189 (46%)
Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQLRPSYASSLMDI-Q 342
AG + ++ G AV D G FGWG Y Q + + Q+ + +
Sbjct: 281 AGVNVIQVATYGDCCLAVSADGGL---FGWGNSEYLQLASVTDSTQVNVPRCLHFSGVGK 337
Query: 343 VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAEN-VPKLLETPI--LESKRAKV 399
V Q A G ++ EG V+V+G +G LG G + E+ VP+++ + L ++
Sbjct: 338 VRQAACGGTGCAVLNGEGHVFVWG---YGILGKGPNLVESAVPEMIPPTLFGLTEFNPEI 394
Query: 400 ----VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGW 455
+ CG H A LT G++ WG N G LG+G D+ P V + G P ++ACG
Sbjct: 395 QVSRIRCGLSHFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRVTMPGE-PVDVACGV 453
Query: 456 WHTLLLAET 464
H + LA++
Sbjct: 454 DHMVTLAKS 462
Score = 127 (49.8 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 35/107 (32%), Positives = 53/107 (49%)
Query: 330 LRPSYASSLMD----IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPK 385
L PS S +D +V Q++ G H++ ++ V+ G N +GQ G V + E +
Sbjct: 159 LEPSPVSLPLDRPQETRVLQVSCGRAHSLVLTDREGVFSMGNNSYGQCGRKVVENEIYSE 218
Query: 386 LLETPILESKRAKVV--SCGARHSAVLTEDGQVLSWGWNKYGQLGLG 430
++ +VV +CG HS LT+ G+V S GW GQ GLG
Sbjct: 219 SHRVHRMQDFDGQVVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLG 265
Score = 68 (29.0 bits), Expect = 7.9e-11, Sum P(2) = 7.9e-11
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+ VV+ A G H + +T+ GEVY+ GW
Sbjct: 229 DGQVVQVACGQDHSLFLTDKGEVYSCGW 256
Score = 62 (26.9 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 29/114 (25%), Positives = 48/114 (42%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLI-TWGSA-DDEGQSYLT 87
G P + + P+P RL D G GF L +S++ + WG + + Q
Sbjct: 89 GARPRRR--IQPVPYRL-ELDQKISSAACGYGFTLLSSKTADVTKVWGMGLNKDSQLGFH 145
Query: 88 SGKHGET--------PEP--FPL--PTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ +T P P PL P E V++ + G AH + +T+ V++ G
Sbjct: 146 RSRKDKTRGYEYVLEPSPVSLPLDRPQETRVLQVSCGRAHSLVLTDREGVFSMG 199
Score = 42 (19.8 bits), Expect = 3.0e-12, Sum P(2) = 3.0e-12
Identities = 11/35 (31%), Positives = 20/35 (57%)
Query: 199 FTLSPCLVTL---NPG-VKITKVAAGGRHTLILSD 229
+ L P V+L P ++ +V+ G H+L+L+D
Sbjct: 157 YVLEPSPVSLPLDRPQETRVLQVSCGRAHSLVLTD 191
Score = 39 (18.8 bits), Expect = 2.1e-10, Sum P(3) = 2.1e-10
Identities = 7/17 (41%), Positives = 12/17 (70%)
Query: 213 KITKVAAGGRHTLILSD 229
++ +VA G H+L L+D
Sbjct: 231 QVVQVACGQDHSLFLTD 247
>RGD|1563497 [details] [associations]
symbol:Sergef "secretion regulating guanine nucleotide exchange
factor" species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IEA;ISO] [GO:0050709 "negative regulation of
protein secretion" evidence=IEA;ISO] InterPro:IPR027048 RGD:1563497
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005730 GO:GO:0045111
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
GeneTree:ENSGT00700000104160 OrthoDB:EOG4J1183
PANTHER:PTHR22870:SF7 IPI:IPI00360920 Ensembl:ENSRNOT00000015352
UCSC:RGD:1563497 Uniprot:D3ZN16
Length = 339
Score = 191 (72.3 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 47/133 (35%), Positives = 65/133 (48%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
+K + GG HS VVTD G L G GQ G G T + LR + L+ + Q+A G
Sbjct: 51 IKSVTGGGGHSVVVTDGGGLFVCGLNKDGQLGLGHTEEVLRFTICKPLLGCPIRQVACGW 110
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETP-ILESKRAKVV--SCGARHS 407
T+ ++ +G+V G N FGQLG + P+ P +E R KVV + G RH+
Sbjct: 111 DFTIMLTEKGQVLSCGSNAFGQLGV-----PHGPRKCVVPQAIECLREKVVCVAAGLRHA 165
Query: 408 AVLTEDGQVLSWG 420
T+ G WG
Sbjct: 166 LATTDTGSTFQWG 178
Score = 174 (66.3 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
Identities = 54/189 (28%), Positives = 88/189 (46%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCG--HGSTNDQLRPSYASSLMDIQVEQIAA 348
++++ACG + ++T+ G +L+ G +GQ G HG + P L + +V +AA
Sbjct: 103 IRQVACGWDFTIMLTEKGQVLSCGSNAFGQLGVPHGPRKCVV-PQAIECLRE-KVVCVAA 160
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL--ETPI----LESKRAKVVSC 402
GL H + + G + +G G + +N+P L + P LES
Sbjct: 161 GLRHALATTDTGSTFQWGTG-LASSGRRLCPGQNLPLFLTAKEPSRVTGLESSTVVCAVA 219
Query: 403 GARHSAVLTEDGQVLSWGWNKYGQLG-LGDSIDRNIPSLVPIHGFLPRNIAC---GWWHT 458
G+ HSA LT+ G++ WG NK+GQL L + +P V H F + GW H
Sbjct: 220 GSDHSASLTDTGELYVWGRNKHGQLASLATFLP--LPQRVEAHYFQDEKVTAVWSGWTHL 277
Query: 459 LLLAETTQI 467
+ ET ++
Sbjct: 278 VAKTETGKV 286
Score = 166 (63.5 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 47/131 (35%), Positives = 67/131 (51%)
Query: 301 SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ-VEQIAAGLWHTVCISVE 359
S V+ A L +G YGQ G G D L P S ++ + G H+V ++
Sbjct: 8 SEAVSAAAVLFAWGANSYGQLGLGHKEDVLLPQQLSDFCKSGCIKSVTGGGGHSVVVTDG 67
Query: 360 GRVYVFGGNQFGQLGTGVDQAENVPKL-LETPILESKRAKVVSCGARHSAVLTEDGQVLS 418
G ++V G N+ GQLG G E V + + P+L + V+CG + +LTE GQVLS
Sbjct: 68 GGLFVCGLNKDGQLGLG--HTEEVLRFTICKPLLGCP-IRQVACGWDFTIMLTEKGQVLS 124
Query: 419 WGWNKYGQLGL 429
G N +GQLG+
Sbjct: 125 CGSNAFGQLGV 135
Score = 158 (60.7 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 39/113 (34%), Positives = 60/113 (53%)
Query: 356 ISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQ 415
+S ++ +G N +GQLG G + +P+ L + +S K V+ G HS V+T+ G
Sbjct: 11 VSAAAVLFAWGANSYGQLGLGHKEDVLLPQQL-SDFCKSGCIKSVTGGGGHSVVVTDGGG 69
Query: 416 VLSWGWNKYGQLGLGDSID-RNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
+ G NK GQLGLG + + P+ G R +ACGW T++L E Q+
Sbjct: 70 LFVCGLNKDGQLGLGHTEEVLRFTICKPLLGCPIRQVACGWDFTIMLTEKGQV 122
Score = 150 (57.9 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 48/151 (31%), Positives = 68/151 (45%)
Query: 288 RSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHG-----STNDQL-----RPSYASS 337
R V +A G RH+ TD G+ TF WG G G N L PS +
Sbjct: 152 REKVVCVAAGLRHALATTDTGS--TFQWGT-GLASSGRRLCPGQNLPLFLTAKEPSRVTG 208
Query: 338 LMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRA 397
L V AG H+ ++ G +YV+G N+ GQL + + +P+ +E + ++
Sbjct: 209 LESSTVVCAVAGSDHSASLTDTGELYVWGRNKHGQLAS-LATFLPLPQRVEAHYFQDEKV 267
Query: 398 KVVSCGARHSAVLTEDGQVLSWGWNKYGQLG 428
V G H TE G+V +WG YGQLG
Sbjct: 268 TAVWSGWTHLVAKTETGKVFTWGRADYGQLG 298
Score = 100 (40.3 bits), Expect = 3.3e-06, Sum P(3) = 3.3e-06
Identities = 34/116 (29%), Positives = 53/116 (45%)
Query: 268 GKDRPL-LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST 326
G++ PL L + +G + V +A G HSA +TD G L +G +GQ +T
Sbjct: 191 GQNLPLFLTAKEPSRVTGLESSTVVCAVA-GSDHSASLTDTGELYVWGRNKHGQLASLAT 249
Query: 327 NDQLRPSY-ASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE 381
L A D +V + +G H V + G+V+ +G +GQLG + E
Sbjct: 250 FLPLPQRVEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQLGRTLGSPE 305
Score = 76 (31.8 bits), Expect = 7.9e-06, Sum P(2) = 7.9e-06
Identities = 22/73 (30%), Positives = 36/73 (49%)
Query: 60 CG--FALATSESGKLITWGSADDEGQSYLTSG-KHGETPEPFPLPTEASVVKAAAGWAHC 116
CG F + +E G++++ GS + GQ + G + P+ E VV AAG H
Sbjct: 108 CGWDFTIMLTEKGQVLSCGS-NAFGQLGVPHGPRKCVVPQAIECLRE-KVVCVAAGLRHA 165
Query: 117 VSVTEAGEVYTWG 129
++ T+ G + WG
Sbjct: 166 LATTDTGSTFQWG 178
Score = 75 (31.5 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
Identities = 34/116 (29%), Positives = 49/116 (42%)
Query: 21 VVYMWG---YLPGTSPEKSPILSPIP-ARLCGGDSWKDVCGGGCGFALATSESGKLITWG 76
V++ WG Y K +L P + C K V GGG G ++ ++ G L G
Sbjct: 16 VLFAWGANSYGQLGLGHKEDVLLPQQLSDFCKSGCIKSVTGGG-GHSVVVTDGGGLFVCG 74
Query: 77 SADDEGQSYLTSGKHGETPEPFPL--PTEASVVK-AAAGWAHCVSVTEAGEVYTWG 129
D GQ L G H E F + P ++ A GW + +TE G+V + G
Sbjct: 75 LNKD-GQ--LGLG-HTEEVLRFTICKPLLGCPIRQVACGWDFTIMLTEKGQVLSCG 126
Score = 41 (19.5 bits), Expect = 3.3e-06, Sum P(3) = 3.3e-06
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 213 KITKVAAGGRHTLILSD 229
K+ VAAG RH L +D
Sbjct: 154 KVVCVAAGLRHALATTD 170
Score = 38 (18.4 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 6/16 (37%), Positives = 11/16 (68%)
Query: 214 ITKVAAGGRHTLILSD 229
I V GG H+++++D
Sbjct: 51 IKSVTGGGGHSVVVTD 66
>WB|WBGene00021685 [details] [associations]
symbol:herc-1 species:6239 "Caenorhabditis elegans"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0006464 "cellular
protein modification process" evidence=IEA] [GO:0019915 "lipid
storage" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0000003 GO:GO:0019915 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00660000095216 HOGENOM:HOG000208452 EMBL:FO081800
HSSP:Q05086 RefSeq:NP_490834.1 ProteinModelPortal:Q9BL11 SMR:Q9BL11
STRING:Q9BL11 PaxDb:Q9BL11 EnsemblMetazoa:Y48G8AL.1.1
EnsemblMetazoa:Y48G8AL.1.2 GeneID:171700 KEGG:cel:CELE_Y48G8AL.1
UCSC:Y48G8AL.1 CTD:171700 WormBase:Y48G8AL.1 InParanoid:Q9BL11
OMA:PRELMEL NextBio:872357 Uniprot:Q9BL11
Length = 1019
Score = 171 (65.3 bits), Expect = 3.5e-14, Sum P(2) = 3.5e-14
Identities = 44/175 (25%), Positives = 78/175 (44%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
+ ++A G H + + G + +G G+C H RP L + + ++ AG
Sbjct: 147 IVQVASGSNHCIALDEGGRVFVWGEQADGRCIH-------RPEPVEQLSGVPIVRVLAGA 199
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
H + +S G V+ +G N G+LG +D + ++ +CG H+ +L
Sbjct: 200 RHCLALSASGAVFTWGQNNSGELG--IDDLRPQTSVQHVHQMDGLGVVEAACGDNHTVLL 257
Query: 411 TEDGQVLSWGWNKYGQLGLGDSID-RNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
T G+ S+G + GQ G G ++ R P+ V + G IA G HT+ + +
Sbjct: 258 THCGRTFSFGSDALGQCGFGKKVEKRTNPTAVSDLIGSHVTRIAAGACHTIAICK 312
Score = 167 (63.8 bits), Expect = 2.9e-14, Sum P(2) = 2.9e-14
Identities = 37/96 (38%), Positives = 50/96 (52%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGS-TNDQLRPSYASSLMDIQVEQIAAG 349
V E ACG H+ ++T G +FG GQCG G + P+ S L+ V +IAAG
Sbjct: 244 VVEAACGDNHTVLLTHCGRTFSFGSDALGQCGFGKKVEKRTNPTAVSDLIGSHVTRIAAG 303
Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPK 385
HT+ I +G Y FG N GQLG G ++ P+
Sbjct: 304 ACHTIAIC-KGAPYPFGLNSSGQLGNGKIMTQSTPR 338
Score = 164 (62.8 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 41/132 (31%), Positives = 65/132 (49%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVEQIAAG 349
V + CG +H+ +T G + + G + GQ G GS + Y S ++ QI+AG
Sbjct: 43 VTSVTCGEQHTVFLTKDGKMWSVGSNMDGQLGRGSRTEGSFSIYPVSWTSSAKIIQISAG 102
Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQA-ENVPKLLETPILESKRAKVVSCGARHSA 408
HTV ++ +GRV+ +G N+ GQLG + P+ ++ E V+ G+ H
Sbjct: 103 RSHTVSVTDDGRVFAWGSNEHGQLGMESKFTWQGTPRRVQ----EINDIVQVASGSNHCI 158
Query: 409 VLTEDGQVLSWG 420
L E G+V WG
Sbjct: 159 ALDEGGRVFVWG 170
Score = 145 (56.1 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 31/89 (34%), Positives = 52/89 (58%)
Query: 343 VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVV-- 400
V + G HTV ++ +G+++ G N GQLG G + E + P+ + AK++
Sbjct: 43 VTSVTCGEQHTVFLTKDGKMWSVGSNMDGQLGRG-SRTEGSFSIY--PVSWTSSAKIIQI 99
Query: 401 SCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
S G H+ +T+DG+V +WG N++GQLG+
Sbjct: 100 SAGRSHTVSVTDDGRVFAWGSNEHGQLGM 128
Score = 139 (54.0 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 37/148 (25%), Positives = 67/148 (45%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
+ + G RH ++ +GA+ T+G G+ G Q + + + V + A G
Sbjct: 192 IVRVLAGARHCLALSASGAVFTWGQNNSGELGIDDLRPQTSVQHVHQMDGLGVVEAACGD 251
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
HTV ++ GR + FG + GQ G G + + ++ S ++ + GA H+ +
Sbjct: 252 NHTVLLTHCGRTFSFGSDALGQCGFGKKVEKRTNPTAVSDLIGSHVTRIAA-GACHTIAI 310
Query: 411 TEDGQVLSWGWNKYGQLGLGDSIDRNIP 438
+ G +G N GQLG G + ++ P
Sbjct: 311 CK-GAPYPFGLNSSGQLGNGKIMTQSTP 337
Score = 99 (39.9 bits), Expect = 2.9e-14, Sum P(2) = 2.9e-14
Identities = 21/71 (29%), Positives = 34/71 (47%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G +A E G++ WG D G+ PEP + +V+ AG HC++
Sbjct: 153 GSNHCIALDEGGRVFVWGEQAD--------GRCIHRPEPVEQLSGVPIVRVLAGARHCLA 204
Query: 119 VTEAGEVYTWG 129
++ +G V+TWG
Sbjct: 205 LSASGAVFTWG 215
Score = 94 (38.1 bits), Expect = 3.5e-14, Sum P(2) = 3.5e-14
Identities = 30/97 (30%), Positives = 47/97 (48%)
Query: 42 IPARLCGGDSWKD---VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGE-TP 95
+P R+ G + D V CG + ++ GK+ + GS D GQ S G +
Sbjct: 27 VPERIIGAPNDMDGTAVTSVTCGEQHTVFLTKDGKMWSVGSNMD-GQLGRGSRTEGSFSI 85
Query: 96 EPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
P + A +++ +AG +H VSVT+ G V+ WG E
Sbjct: 86 YPVSWTSSAKIIQISAGRSHTVSVTDDGRVFAWGSNE 122
Score = 94 (38.1 bits), Expect = 9.6e-14, Sum P(2) = 9.6e-14
Identities = 20/71 (28%), Positives = 37/71 (52%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G ++ ++ G++ WGS ++ GQ + S K P + +V+ A+G HC++
Sbjct: 102 GRSHTVSVTDDGRVFAWGS-NEHGQLGMES-KFTWQGTPRRVQEINDIVQVASGSNHCIA 159
Query: 119 VTEAGEVYTWG 129
+ E G V+ WG
Sbjct: 160 LDEGGRVFVWG 170
Score = 45 (20.9 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 10/31 (32%), Positives = 19/31 (61%)
Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
F++ P V+ KI +++AG HT+ ++D
Sbjct: 83 FSIYP--VSWTSSAKIIQISAGRSHTVSVTD 111
Score = 41 (19.5 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 211 GVKITKVAAGGRHTLILS 228
G +T V G +HT+ L+
Sbjct: 40 GTAVTSVTCGEQHTVFLT 57
>UNIPROTKB|Q9BL11 [details] [associations]
symbol:herc-1 "Protein HERC-1" species:6239 "Caenorhabditis
elegans" [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
[GO:0005737 "cytoplasm" evidence=IBA] [GO:0005634 "nucleus"
evidence=IBA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0000003 GO:GO:0019915 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 GeneTree:ENSGT00660000095216 HOGENOM:HOG000208452
EMBL:FO081800 HSSP:Q05086 RefSeq:NP_490834.1
ProteinModelPortal:Q9BL11 SMR:Q9BL11 STRING:Q9BL11 PaxDb:Q9BL11
EnsemblMetazoa:Y48G8AL.1.1 EnsemblMetazoa:Y48G8AL.1.2 GeneID:171700
KEGG:cel:CELE_Y48G8AL.1 UCSC:Y48G8AL.1 CTD:171700
WormBase:Y48G8AL.1 InParanoid:Q9BL11 OMA:PRELMEL NextBio:872357
Uniprot:Q9BL11
Length = 1019
Score = 171 (65.3 bits), Expect = 3.5e-14, Sum P(2) = 3.5e-14
Identities = 44/175 (25%), Positives = 78/175 (44%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
+ ++A G H + + G + +G G+C H RP L + + ++ AG
Sbjct: 147 IVQVASGSNHCIALDEGGRVFVWGEQADGRCIH-------RPEPVEQLSGVPIVRVLAGA 199
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
H + +S G V+ +G N G+LG +D + ++ +CG H+ +L
Sbjct: 200 RHCLALSASGAVFTWGQNNSGELG--IDDLRPQTSVQHVHQMDGLGVVEAACGDNHTVLL 257
Query: 411 TEDGQVLSWGWNKYGQLGLGDSID-RNIPSLVP-IHGFLPRNIACGWWHTLLLAE 463
T G+ S+G + GQ G G ++ R P+ V + G IA G HT+ + +
Sbjct: 258 THCGRTFSFGSDALGQCGFGKKVEKRTNPTAVSDLIGSHVTRIAAGACHTIAICK 312
Score = 167 (63.8 bits), Expect = 2.9e-14, Sum P(2) = 2.9e-14
Identities = 37/96 (38%), Positives = 50/96 (52%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGS-TNDQLRPSYASSLMDIQVEQIAAG 349
V E ACG H+ ++T G +FG GQCG G + P+ S L+ V +IAAG
Sbjct: 244 VVEAACGDNHTVLLTHCGRTFSFGSDALGQCGFGKKVEKRTNPTAVSDLIGSHVTRIAAG 303
Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPK 385
HT+ I +G Y FG N GQLG G ++ P+
Sbjct: 304 ACHTIAIC-KGAPYPFGLNSSGQLGNGKIMTQSTPR 338
Score = 164 (62.8 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 41/132 (31%), Positives = 65/132 (49%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVEQIAAG 349
V + CG +H+ +T G + + G + GQ G GS + Y S ++ QI+AG
Sbjct: 43 VTSVTCGEQHTVFLTKDGKMWSVGSNMDGQLGRGSRTEGSFSIYPVSWTSSAKIIQISAG 102
Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQA-ENVPKLLETPILESKRAKVVSCGARHSA 408
HTV ++ +GRV+ +G N+ GQLG + P+ ++ E V+ G+ H
Sbjct: 103 RSHTVSVTDDGRVFAWGSNEHGQLGMESKFTWQGTPRRVQ----EINDIVQVASGSNHCI 158
Query: 409 VLTEDGQVLSWG 420
L E G+V WG
Sbjct: 159 ALDEGGRVFVWG 170
Score = 145 (56.1 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 31/89 (34%), Positives = 52/89 (58%)
Query: 343 VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVV-- 400
V + G HTV ++ +G+++ G N GQLG G + E + P+ + AK++
Sbjct: 43 VTSVTCGEQHTVFLTKDGKMWSVGSNMDGQLGRG-SRTEGSFSIY--PVSWTSSAKIIQI 99
Query: 401 SCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
S G H+ +T+DG+V +WG N++GQLG+
Sbjct: 100 SAGRSHTVSVTDDGRVFAWGSNEHGQLGM 128
Score = 139 (54.0 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 37/148 (25%), Positives = 67/148 (45%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
+ + G RH ++ +GA+ T+G G+ G Q + + + V + A G
Sbjct: 192 IVRVLAGARHCLALSASGAVFTWGQNNSGELGIDDLRPQTSVQHVHQMDGLGVVEAACGD 251
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
HTV ++ GR + FG + GQ G G + + ++ S ++ + GA H+ +
Sbjct: 252 NHTVLLTHCGRTFSFGSDALGQCGFGKKVEKRTNPTAVSDLIGSHVTRIAA-GACHTIAI 310
Query: 411 TEDGQVLSWGWNKYGQLGLGDSIDRNIP 438
+ G +G N GQLG G + ++ P
Sbjct: 311 CK-GAPYPFGLNSSGQLGNGKIMTQSTP 337
Score = 99 (39.9 bits), Expect = 2.9e-14, Sum P(2) = 2.9e-14
Identities = 21/71 (29%), Positives = 34/71 (47%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G +A E G++ WG D G+ PEP + +V+ AG HC++
Sbjct: 153 GSNHCIALDEGGRVFVWGEQAD--------GRCIHRPEPVEQLSGVPIVRVLAGARHCLA 204
Query: 119 VTEAGEVYTWG 129
++ +G V+TWG
Sbjct: 205 LSASGAVFTWG 215
Score = 94 (38.1 bits), Expect = 3.5e-14, Sum P(2) = 3.5e-14
Identities = 30/97 (30%), Positives = 47/97 (48%)
Query: 42 IPARLCGGDSWKD---VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGE-TP 95
+P R+ G + D V CG + ++ GK+ + GS D GQ S G +
Sbjct: 27 VPERIIGAPNDMDGTAVTSVTCGEQHTVFLTKDGKMWSVGSNMD-GQLGRGSRTEGSFSI 85
Query: 96 EPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
P + A +++ +AG +H VSVT+ G V+ WG E
Sbjct: 86 YPVSWTSSAKIIQISAGRSHTVSVTDDGRVFAWGSNE 122
Score = 94 (38.1 bits), Expect = 9.6e-14, Sum P(2) = 9.6e-14
Identities = 20/71 (28%), Positives = 37/71 (52%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G ++ ++ G++ WGS ++ GQ + S K P + +V+ A+G HC++
Sbjct: 102 GRSHTVSVTDDGRVFAWGS-NEHGQLGMES-KFTWQGTPRRVQEINDIVQVASGSNHCIA 159
Query: 119 VTEAGEVYTWG 129
+ E G V+ WG
Sbjct: 160 LDEGGRVFVWG 170
Score = 45 (20.9 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 10/31 (32%), Positives = 19/31 (61%)
Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
F++ P V+ KI +++AG HT+ ++D
Sbjct: 83 FSIYP--VSWTSSAKIIQISAGRSHTVSVTD 111
Score = 41 (19.5 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 211 GVKITKVAAGGRHTLILS 228
G +T V G +HT+ L+
Sbjct: 40 GTAVTSVTCGEQHTVFLT 57
>UNIPROTKB|F1S9B1 [details] [associations]
symbol:SERGEF "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050709 "negative regulation of protein secretion"
evidence=IEA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR027048 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005730 GO:GO:0045111 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GO:GO:0050709 GeneTree:ENSGT00700000104160 PANTHER:PTHR22870:SF7
EMBL:CU914672 EMBL:CU467662 EMBL:CU693468
Ensembl:ENSSSCT00000014607 OMA:VYQWGTG Uniprot:F1S9B1
Length = 338
Score = 205 (77.2 bits), Expect = 4.0e-14, P = 4.0e-14
Identities = 52/133 (39%), Positives = 68/133 (51%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
VK I GG HSA+VTD G+L G GQ G G T D L + SL+ ++Q+A G
Sbjct: 51 VKRITGGGGHSAIVTDQGSLFVCGLNKDGQLGLGHTEDVLYFTLCKSLLGCPIQQVACGW 110
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETP-ILESKRAKVVS--CGARHS 407
T+ ++ G+V G N FGQLG + P+ P +E +R KVVS G RH+
Sbjct: 111 DFTIILTKNGQVLSCGSNSFGQLGV-----PHGPRRCVVPQAIEVQREKVVSIAAGLRHA 165
Query: 408 AVLTEDGQVLSWG 420
T G V WG
Sbjct: 166 LAATASGLVFQWG 178
Score = 181 (68.8 bits), Expect = 3.3e-14, Sum P(2) = 3.3e-14
Identities = 55/189 (29%), Positives = 89/189 (47%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCG--HGSTNDQLRPSYASSLMDIQVEQIAA 348
++++ACG + ++T G +L+ G +GQ G HG + P A + +V IAA
Sbjct: 103 IQQVACGWDFTIILTKNGQVLSCGSNSFGQLGVPHGPRRCVV-PQ-AIEVQREKVVSIAA 160
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLE-------TPILESKRAKVVS 401
GL H + + G V+ +G G + + +P L T LE+ +A V
Sbjct: 161 GLRHALAATASGLVFQWGTG-LASSGRRLCPGQTLPLFLTAKEPSKVTVGLENSQAVCVL 219
Query: 402 CGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIAC---GWWHT 458
G+ HSA LT+ G++ WG NK+GQL + +P + H F +A GW H
Sbjct: 220 AGSGHSASLTDAGELYVWGSNKHGQLA-SQAAFLPLPQKIEAHRFQNEKVAAVWSGWTHL 278
Query: 459 LLLAETTQI 467
+ ET ++
Sbjct: 279 VAQTETGKV 287
Score = 172 (65.6 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 53/161 (32%), Positives = 76/161 (47%)
Query: 301 SAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ-VEQIAAGLWHTVCISVE 359
S A AL +G YGQ G G D L P S V++I G H+ ++ +
Sbjct: 8 SEAAPPATALFAWGANSYGQLGLGHKEDVLLPQQLSEFCKPGCVKRITGGGGHSAIVTDQ 67
Query: 360 GRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSW 419
G ++V G N+ GQLG G E+V L + V+CG + +LT++GQVLS
Sbjct: 68 GSLFVCGLNKDGQLGLG--HTEDVLYFTLCKSLLGCPIQQVACGWDFTIILTKNGQVLSC 125
Query: 420 GWNKYGQLGLGDSIDRNI-PSLVPIHGFLPRNIACGWWHTL 459
G N +GQLG+ R + P + + +IA G H L
Sbjct: 126 GSNSFGQLGVPHGPRRCVVPQAIEVQREKVVSIAAGLRHAL 166
Score = 151 (58.2 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 44/150 (29%), Positives = 69/150 (46%)
Query: 288 RSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASS---------L 338
R V IA G RH+ T +G + +G GL G Q P + ++ L
Sbjct: 152 REKVVSIAAGLRHALAATASGLVFQWGTGL-ASSGRRLCPGQTLPLFLTAKEPSKVTVGL 210
Query: 339 MDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAK 398
+ Q + AG H+ ++ G +YV+G N+ GQL + +P+ +E ++++
Sbjct: 211 ENSQAVCVLAGSGHSASLTDAGELYVWGSNKHGQLASQAAFLP-LPQKIEAHRFQNEKVA 269
Query: 399 VVSCGARHSAVLTEDGQVLSWGWNKYGQLG 428
V G H TE G+V +WG YGQLG
Sbjct: 270 AVWSGWTHLVAQTETGKVFTWGRADYGQLG 299
Score = 145 (56.1 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 35/107 (32%), Positives = 59/107 (55%)
Query: 362 VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
++ +G N +GQLG G + +P+ L + + K ++ G HSA++T+ G + G
Sbjct: 17 LFAWGANSYGQLGLGHKEDVLLPQQL-SEFCKPGCVKRITGGGGHSAIVTDQGSLFVCGL 75
Query: 422 NKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
NK GQLGLG + D +L + G + +ACGW T++L + Q+
Sbjct: 76 NKDGQLGLGHTEDVLYFTLCKSLLGCPIQQVACGWDFTIILTKNGQV 122
Score = 100 (40.3 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 31/109 (28%), Positives = 51/109 (46%)
Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSY-ASSLMDIQVEQIAAGLWH 352
+ G HSA +TDAG L +G +GQ + L A + +V + +G H
Sbjct: 218 VLAGSGHSASLTDAGELYVWGSNKHGQLASQAAFLPLPQKIEAHRFQNEKVAAVWSGWTH 277
Query: 353 TVCISVEGRVYVFGGNQFGQLGTGVDQAEN-VPKLLETPILESKRAKVV 400
V + G+V+ +G +GQLG ++ E PK + + S+ A+ V
Sbjct: 278 LVAQTETGKVFTWGRADYGQLGRTLESPEGWKPKKQASSLPCSRPARSV 326
Score = 81 (33.6 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 22/73 (30%), Positives = 39/73 (53%)
Query: 60 CG--FALATSESGKLITWGSADDEGQSYLTSG-KHGETPEPFPLPTEASVVKAAAGWAHC 116
CG F + +++G++++ GS + GQ + G + P+ + E VV AAG H
Sbjct: 108 CGWDFTIILTKNGQVLSCGS-NSFGQLGVPHGPRRCVVPQAIEVQRE-KVVSIAAGLRHA 165
Query: 117 VSVTEAGEVYTWG 129
++ T +G V+ WG
Sbjct: 166 LAATASGLVFQWG 178
Score = 66 (28.3 bits), Expect = 3.3e-14, Sum P(2) = 3.3e-14
Identities = 32/117 (27%), Positives = 47/117 (40%)
Query: 20 TVVYMWG---YLPGTSPEKSPILSPIP-ARLCGGDSWKDVCGGGCGFALATSESGKLITW 75
T ++ WG Y K +L P + C K + GGG G + ++ G L
Sbjct: 15 TALFAWGANSYGQLGLGHKEDVLLPQQLSEFCKPGCVKRITGGG-GHSAIVTDQGSLFVC 73
Query: 76 GSADDEGQSYLTSGKHGETPEPFPLPTE---ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G D GQ L G H E F L + + A GW + +T+ G+V + G
Sbjct: 74 GLNKD-GQ--LGLG-HTEDVLYFTLCKSLLGCPIQQVACGWDFTIILTKNGQVLSCG 126
Score = 40 (19.1 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 210 PGVKITKVAAGGRHTLILSD 229
PG + ++ GG H+ I++D
Sbjct: 48 PGC-VKRITGGGGHSAIVTD 66
Score = 38 (18.4 bits), Expect = 5.1e-05, Sum P(3) = 5.1e-05
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 213 KITKVAAGGRHTL 225
K+ +AAG RH L
Sbjct: 154 KVVSIAAGLRHAL 166
>UNIPROTKB|C9JQZ4 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 IPI:IPI00925791
ProteinModelPortal:C9JQZ4 SMR:C9JQZ4 STRING:C9JQZ4
Ensembl:ENST00000430407 ArrayExpress:C9JQZ4 Bgee:C9JQZ4
Uniprot:C9JQZ4
Length = 283
Score = 199 (75.1 bits), Expect = 3.9e-14, P = 3.9e-14
Identities = 57/149 (38%), Positives = 85/149 (57%)
Query: 300 HSAVVTDAGALLTFGWGLYGQCGHG-STNDQLRPSYASSLMDIQVEQIAAGLWHTVCISV 358
H + T+ G +LT G G GQ G G + ++ +P+ S D+ V+ A G+ HTVC+S
Sbjct: 27 HRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDV-VQAEAGGM-HTVCLSK 84
Query: 359 EGRVYVFGGNQFGQLG--TGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQV 416
G+VY FG N G LG T V+ +E VP +E L+ K +V S G H+A LT+DG+V
Sbjct: 85 SGQVYSFGCNDEGALGRDTSVEGSEMVPGKVE---LQEKVVQV-SAGDSHTAALTDDGRV 140
Query: 417 LSWGW--NKYGQLGLGDSIDRNIPSLVPI 443
WG + G +GL + + + S+VP+
Sbjct: 141 FLWGSFRDNNGVIGLLEPMKK---SMVPV 166
Score = 125 (49.1 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 48/185 (25%), Positives = 86/185 (46%)
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAG-RSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
C + A G+D + +GS GK + V +++ G H+A +TD G + +G
Sbjct: 93 CNDEGALGRDTSV---EGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLWG-SFRD 148
Query: 320 QCGHGSTNDQLRPSYA--SSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGV 377
G + ++ S +D+ V ++A+G H V ++ +G +Y G + GQLG
Sbjct: 149 NNGVIGLLEPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVP 208
Query: 378 DQAEN------VPKLL--ETPILESK--RAKV----VSCGARHSAVLTEDGQVLSWGWNK 423
+ N + +LL + +L+S+ R V CGA + ++ +G V +G +
Sbjct: 209 ELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSN 268
Query: 424 YGQLG 428
Y QLG
Sbjct: 269 YHQLG 273
Score = 120 (47.3 bits), Expect = 0.00014, P = 0.00014
Identities = 39/143 (27%), Positives = 69/143 (48%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST--NDQLRPSYASSLMDIQVEQIAA 348
V + GG H+ ++ +G + +FG G G ++ ++ P + +V Q++A
Sbjct: 69 VVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVE--LQEKVVQVSA 126
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI---LESKRAKVVSCGAR 405
G HT ++ +GRV+++G F + E + K + P+ L+ KV S G
Sbjct: 127 GDSHTAALTDDGRVFLWGS--FRDNNGVIGLLEPMKKSM-VPVQVQLDVPVVKVAS-GND 182
Query: 406 HSAVLTEDGQVLSWGWNKYGQLG 428
H +LT DG + + G + GQLG
Sbjct: 183 HLVMLTADGDLYTLGCGEQGQLG 205
Score = 90 (36.7 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 26/95 (27%), Positives = 46/95 (48%)
Query: 35 KSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGET 94
K P L IP + ++ GG + S+SG++ ++G +DEG + G
Sbjct: 58 KKPALVSIPEDVVQAEA------GGM-HTVCLSKSGQVYSFG-CNDEGALGRDTSVEGSE 109
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P + + VV+ +AG +H ++T+ G V+ WG
Sbjct: 110 MVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLWG 144
Score = 77 (32.2 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 30/101 (29%), Positives = 41/101 (40%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGH--------GSTNDQLRPSYASSLM--- 339
V ++A G H ++T G L T G G GQ G G R +M
Sbjct: 174 VVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKS 233
Query: 340 -----DIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGT 375
++ + G + T IS EG VY FG + + QLGT
Sbjct: 234 RGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGT 274
>DICTYBASE|DDB_G0278255 [details] [associations]
symbol:DDB_G0278255 "regulator of chromosome
condensation (RCC1) domain-containing protein" species:44689
"Dictyostelium discoideum" [GO:0044351 "macropinocytosis"
evidence=RCA] dictyBase:DDB_G0278255 INTERPRO:IPR000408
Pfam:PF00415 EMBL:AAFI02000023 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 RefSeq:XP_642243.1
ProteinModelPortal:Q54YF9 PRIDE:Q54YF9 EnsemblProtists:DDB0235387
GeneID:8621452 KEGG:ddi:DDB_G0278255 InParanoid:Q54YF9 OMA:DIACGGY
Uniprot:Q54YF9
Length = 514
Score = 201 (75.8 bits), Expect = 4.9e-14, Sum P(2) = 4.9e-14
Identities = 54/181 (29%), Positives = 93/181 (51%)
Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQCGHG-STNDQ---LRPSYASSLM----DIQV 343
K+I G H+ ++ + G+L ++G G +G GHG +ND+ P ++ + ++
Sbjct: 248 KKICSGSDHNLLLGNDGSLYSWGNGYFGALGHGVGSNDKENIYTPKKITTFTLNNNESRI 307
Query: 344 EQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAEN--VPKLLETPILESKRAKVVS 401
IA G +H++ ++ + +Y FG +FGQLG G + N +PK +++ + K+ S
Sbjct: 308 VDIACGGYHSMFLTNDNEIYTFGYGEFGQLGHGENDTLNHYIPKRIKSTGDNAAGNKIKS 367
Query: 402 CGA---RHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHT 458
A +S +T DG V SWGWN G LG G + + P + + + I G+ HT
Sbjct: 368 IFAGDHANSFYITTDGSVYSWGWNDGGSLGHGTNENHYSPKKIQSLSNI-KKITSGFKHT 426
Query: 459 L 459
L
Sbjct: 427 L 427
Score = 175 (66.7 bits), Expect = 4.6e-11, Sum P(2) = 4.6e-11
Identities = 51/184 (27%), Positives = 87/184 (47%)
Query: 262 LEHAASGKDRPLLVRQGSVNS-SGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
L H D+ + + + + S + +IACGG HS +T+ + TFG+G +GQ
Sbjct: 277 LGHGVGSNDKENIYTPKKITTFTLNNNESRIVDIACGGYHSMFLTNDNEIYTFGYGEFGQ 336
Query: 321 CGHGSTNDQLR---PSYASSLMDI----QVEQIAAGLW-HTVCISVEGRVYVFGGNQFGQ 372
GHG ND L P S D +++ I AG ++ I+ +G VY +G N G
Sbjct: 337 LGHGE-NDTLNHYIPKRIKSTGDNAAGNKIKSIFAGDHANSFYITTDGSVYSWGWNDGGS 395
Query: 373 LGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDS 432
LG G ++ PK +++ K ++ G +H+ + + + +G N +GQ L +
Sbjct: 396 LGHGTNENHYSPKKIQS----LSNIKKITSGFKHTLAQSINNDIYVFGDNTFGQTALKFN 451
Query: 433 IDRN 436
+ N
Sbjct: 452 YNSN 455
Score = 51 (23.0 bits), Expect = 4.9e-14, Sum P(2) = 4.9e-14
Identities = 16/68 (23%), Positives = 32/68 (47%)
Query: 62 FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTE 121
+++ S+ G L S DD+ + + K + E F +++ +G+ H + VT+
Sbjct: 139 YSIGKSKYGVLGIGRSIDDDDDNNNNNEKVYKI-EKF----NDNIISIVSGYEHSLVVTK 193
Query: 122 AGEVYTWG 129
+Y WG
Sbjct: 194 DDGIYGWG 201
>UNIPROTKB|F1Q1C6 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104312 OMA:MVTLAKS EMBL:AAEX03004216
EMBL:AAEX03004217 Ensembl:ENSCAFT00000018027 Uniprot:F1Q1C6
Length = 465
Score = 184 (69.8 bits), Expect = 5.1e-14, Sum P(2) = 5.1e-14
Identities = 52/170 (30%), Positives = 81/170 (47%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL-RPSYASSLM---DIQVEQI 346
V +++CG HS ++TD + + G YGQCG +++ S+ + M D QV Q+
Sbjct: 177 VLQVSCGRAHSLILTDCEGVFSMGNNAYGQCGRNVVENEIYSESHKVNRMQDFDGQVVQV 236
Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
G H++ ++ +G VY G GQ G G +VP L + +V + G
Sbjct: 237 VCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYDITSVPTKLGGDLAGVNVVQVATYGDCC 296
Query: 407 SAVLTEDGQVLSWGWNKYGQLG-LGDSIDRNIPSLVPIHGF-LPRNIACG 454
AV E G + WG ++Y QL + DS N+P +P G + ACG
Sbjct: 297 LAVSAEGG-LFGWGNSEYLQLASVTDSTQVNVPRCLPFSGVGKVKQAACG 345
Score = 150 (57.9 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 56/184 (30%), Positives = 85/184 (46%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQLRPSYASSLMDI-QVEQIA 347
V ++A G V+ G L FGWG Y Q + + Q+ + +V+Q A
Sbjct: 286 VVQVATYGDCCLAVSAEGGL--FGWGNSEYLQLASVTDSTQVNVPRCLPFSGVGKVKQAA 343
Query: 348 AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV-PKLLETPIL---ESKRAKVVS-- 401
G ++ EG V+V+G +G LG G + E P+++ + E VS
Sbjct: 344 CGGTGCAVLNGEGHVFVWG---YGILGKGPNLVETAFPEVIPPTLFGLTEFNPGVHVSHI 400
Query: 402 -CGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLL 460
CG H A LT G++ WG N G LG+G D+ P V + G P ++ACG H +
Sbjct: 401 WCGLSHFAALTSKGELFVWGKNIRGCLGIGRLEDQYFPWRVTMPGE-PVDVACGVDHMVT 459
Query: 461 LAET 464
LA++
Sbjct: 460 LAKS 463
Score = 127 (49.8 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 33/103 (32%), Positives = 54/103 (52%)
Query: 340 DIQVEQIAAGLWHTVCIS-VEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAK 398
+ +V Q++ G H++ ++ EG V+ G N +GQ G V + E + + ++ +
Sbjct: 174 ETRVLQVSCGRAHSLILTDCEG-VFSMGNNAYGQCGRNVVENEIYSESHKVNRMQDFDGQ 232
Query: 399 VVS--CGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS 439
VV CG HS LT+ G+V S GW GQ GLG ++P+
Sbjct: 233 VVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYDITSVPT 275
Score = 106 (42.4 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 35/133 (26%), Positives = 60/133 (45%)
Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGH--GSTNDQLRPSYASSLMD--- 340
+G VK+ ACGG AV+ G + +G+G+ G+ + + ++ P L +
Sbjct: 334 SGVGKVKQAACGGTGCAVLNGEGHVFVWGYGILGKGPNLVETAFPEVIPPTLFGLTEFNP 393
Query: 341 -IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKV 399
+ V I GL H ++ +G ++V+G N G LG G + + P + P
Sbjct: 394 GVHVSHIWCGLSHFAALTSKGELFVWGKNIRGCLGIGRLEDQYFPWRVTMP----GEPVD 449
Query: 400 VSCGARHSAVLTE 412
V+CG H L +
Sbjct: 450 VACGVDHMVTLAK 462
Score = 68 (29.0 bits), Expect = 5.1e-14, Sum P(2) = 5.1e-14
Identities = 33/115 (28%), Positives = 51/115 (44%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLIT--WGSA--DDEGQSY 85
G+ P + + P+P RL D G GF L +S++ K +T WG D +
Sbjct: 90 GSRPPRR--IQPVPYRL-ELDQKISSAACGYGFTLLSSKT-KDVTKVWGMGLNKDSQLGF 145
Query: 86 LTSGK---HG------ETPEPFPL--PTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
S K G +P P PL P E V++ + G AH + +T+ V++ G
Sbjct: 146 HRSHKDKTRGYEYVLEPSPVPLPLDRPQETRVLQVSCGRAHSLILTDCEGVFSMG 200
Score = 64 (27.6 bits), Expect = 9.8e-10, Sum P(2) = 9.8e-10
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+ VV+ G H + +T+ GEVY+ GW
Sbjct: 230 DGQVVQVVCGQDHSLFLTDKGEVYSCGW 257
Score = 63 (27.2 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 26/89 (29%), Positives = 43/89 (48%)
Query: 55 VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE---ASVVKAAA 111
VCG +L ++ G++ + G D GQ+ L G + T P L + +VV+ A
Sbjct: 237 VCGQD--HSLFLTDKGEVYSCGWGAD-GQTGL--GHYDITSVPTKLGGDLAGVNVVQVAT 291
Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVT 140
C++V+ G ++ WG E + A VT
Sbjct: 292 YGDCCLAVSAEGGLFGWGNSEYLQLASVT 320
Score = 41 (19.5 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 7/17 (41%), Positives = 13/17 (76%)
Query: 213 KITKVAAGGRHTLILSD 229
++ +V+ G H+LIL+D
Sbjct: 176 RVLQVSCGRAHSLILTD 192
>UNIPROTKB|G3V1B4 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CH471064 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 PANTHER:PTHR22870:SF7 UniGene:Hs.32470
HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058 EMBL:AC124078
ProteinModelPortal:G3V1B4 SMR:G3V1B4 Ensembl:ENST00000525422
ArrayExpress:G3V1B4 Bgee:G3V1B4 Uniprot:G3V1B4
Length = 354
Score = 187 (70.9 bits), Expect = 6.2e-12, P = 6.2e-12
Identities = 56/154 (36%), Positives = 76/154 (49%)
Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
K+ LL +Q +N K RS V+ I GG HSAVVTD G L G GQ G G T D
Sbjct: 33 KEDVLLPQQ--LNDFCKP-RS-VRRITGGGGHSAVVTDGGDLFVCGLNKDGQLGLGHTED 88
Query: 329 QLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGT--GVDQAENVPKL 386
+ SL ++Q+A G T+ ++ G+V G N FGQLG G + VP+
Sbjct: 89 IPYFTPCKSLFGCPIQQVACGWDFTIMLTENGQVLSCGSNSFGQLGVPHGPRRCV-VPQA 147
Query: 387 LETPILESKRAKVVSCGARHSAVLTEDGQVLSWG 420
+E L ++ ++ G RH+ T G V WG
Sbjct: 148 IE---LHKEKVVCIAAGLRHAVAATASGIVFQWG 178
Score = 183 (69.5 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 56/185 (30%), Positives = 88/185 (47%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCG--HGSTNDQLRPSYASSLMDIQVEQIAA 348
++++ACG + ++T+ G +L+ G +GQ G HG + P A L +V IAA
Sbjct: 103 IQQVACGWDFTIMLTENGQVLSCGSNSFGQLGVPHGPRRCVV-PQ-AIELHKEKVVCIAA 160
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL--ETPI----LESKRAKVVSC 402
GL H V + G V+ +G G + + +P + P LE+ +A V
Sbjct: 161 GLRHAVAATASGIVFQWGTG-LASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLA 219
Query: 403 GARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIAC---GWWHTL 459
G+ HSA LT+ G+V WG NK+GQL ++ +P + H F + GW H +
Sbjct: 220 GSDHSASLTDAGEVYVWGSNKHGQLA-NEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLV 278
Query: 460 LLAET 464
ET
Sbjct: 279 AQTET 283
Score = 180 (68.4 bits), Expect = 4.0e-11, P = 4.0e-11
Identities = 52/155 (33%), Positives = 75/155 (48%)
Query: 307 AGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ-VEQIAAGLWHTVCISVEGRVYVF 365
A AL +G YGQ G G D L P + + V +I G H+ ++ G ++V
Sbjct: 14 AAALFAWGANSYGQLGLGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTDGGDLFVC 73
Query: 366 GGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYG 425
G N+ GQLG G E++P L + V+CG + +LTE+GQVLS G N +G
Sbjct: 74 GLNKDGQLGLG--HTEDIPYFTPCKSLFGCPIQQVACGWDFTIMLTENGQVLSCGSNSFG 131
Query: 426 QLGLGDSIDRNI-PSLVPIHGFLPRNIACGWWHTL 459
QLG+ R + P + +H IA G H +
Sbjct: 132 QLGVPHGPRRCVVPQAIELHKEKVVCIAAGLRHAV 166
Score = 162 (62.1 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 38/109 (34%), Positives = 60/109 (55%)
Query: 362 VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
++ +G N +GQLG G + +P+ L + + + ++ G HSAV+T+ G + G
Sbjct: 17 LFAWGANSYGQLGLGHKEDVLLPQQLND-FCKPRSVRRITGGGGHSAVVTDGGDLFVCGL 75
Query: 422 NKYGQLGLGDSIDRNIPSLVP---IHGFLPRNIACGWWHTLLLAETTQI 467
NK GQLGLG + D IP P + G + +ACGW T++L E Q+
Sbjct: 76 NKDGQLGLGHTED--IPYFTPCKSLFGCPIQQVACGWDFTIMLTENGQV 122
Score = 161 (61.7 bits), Expect = 5.7e-14, Sum P(2) = 5.7e-14
Identities = 44/143 (30%), Positives = 67/143 (46%)
Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGH----GSTNDQL----RPSYASSLMDIQVEQ 345
IA G RH+ T +G + +G GL CG G T PS + L + +
Sbjct: 158 IAAGLRHAVAATASGIVFQWGTGL-ASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMC 216
Query: 346 IAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGAR 405
+ AG H+ ++ G VYV+G N+ GQL VP+ +E ++++ + G
Sbjct: 217 VLAGSDHSASLTDAGEVYVWGSNKHGQLANEAAFLP-VPQKIEAHCFQNEKVTAIWSGWT 275
Query: 406 HSAVLTEDGQVLSWGWNKYGQLG 428
H TE G++ +WG YGQLG
Sbjct: 276 HLVAQTETGKMFTWGRADYGQLG 298
Score = 90 (36.7 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 30/125 (24%), Positives = 51/125 (40%)
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
L C G+ PL + S + G HSA +TDAG + +G
Sbjct: 181 LASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNK 240
Query: 318 YGQCGHGSTNDQLRPSY-ASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG 376
+GQ + + + A + +V I +G H V + G+++ +G +GQLG
Sbjct: 241 HGQLANEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLGRK 300
Query: 377 VDQAE 381
++ E
Sbjct: 301 LETYE 305
Score = 88 (36.0 bits), Expect = 5.7e-14, Sum P(2) = 5.7e-14
Identities = 30/97 (30%), Positives = 47/97 (48%)
Query: 34 EKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG-KHG 92
E P +P + L G + CG F + +E+G++++ GS + GQ + G +
Sbjct: 87 EDIPYFTPCKS-LFGCPIQQVACGWD--FTIMLTENGQVLSCGS-NSFGQLGVPHGPRRC 142
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P+ L E VV AAG H V+ T +G V+ WG
Sbjct: 143 VVPQAIELHKE-KVVCIAAGLRHAVAATASGIVFQWG 178
Score = 49 (22.3 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 17/66 (25%), Positives = 26/66 (39%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPF-PLPTEASVVKAAAGWAHCVSVTEAG 123
A + L WG A+ GQ L + P+ SV + G H VT+ G
Sbjct: 10 AAPAAAALFAWG-ANSYGQLGLGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTDGG 68
Query: 124 EVYTWG 129
+++ G
Sbjct: 69 DLFVCG 74
>DICTYBASE|DDB_G0276527 [details] [associations]
symbol:DDB_G0276527 "putative bifunctional
serine/threonine-protein kinase/ubiquitin-protein ligase
DDB_G0276527" species:44689 "Dictyostelium discoideum" [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0006468 "protein phosphorylation" evidence=IEA]
[GO:0006464 "cellular protein modification process" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] [GO:0004672 "protein kinase activity"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 InterPro:IPR000719 InterPro:IPR008271
InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 PROSITE:PS50237 SMART:SM00119 UniPathway:UPA00143
dictyBase:DDB_G0276527 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005524 eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674
GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 EMBL:AAFI02000015 SUPFAM:SSF56204 HSSP:Q9H0M0
RefSeq:XP_643080.1 ProteinModelPortal:Q8SSY6
EnsemblProtists:DDB0219986 GeneID:8620484 KEGG:ddi:DDB_G0276527
InParanoid:Q8SSY6 OMA:IITIIVE Uniprot:Q8SSY6
Length = 1887
Score = 219 (82.2 bits), Expect = 6.5e-14, Sum P(2) = 6.5e-14
Identities = 55/184 (29%), Positives = 94/184 (51%)
Query: 279 SVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN--DQLRPSYAS 336
S NSS + + +++CG SAV+TD G L TFG G +G+ G G + Q P
Sbjct: 328 SQNSSSNNNKIKIVKLSCGTNRSAVITDKGLLFTFGRGDHGRLGLGEQSLLMQSTPKLVQ 387
Query: 337 SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGV-DQAENVPKLLE--TPILE 393
SL + +++G H++ ++ +G V+ FG N GQLG G + +PK ++ +
Sbjct: 388 SLQGHFIIDMSSGGGHSLVLTNKGLVFSFGRNDQGQLGIGCFSNQQTIPKQIQWFQTSQQ 447
Query: 394 SKRAKV----VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSI--DRNIPSLVPIHGFL 447
++ + VS G HS ++++ +WG + YG LG + DRN+P L+ + +
Sbjct: 448 QQQQPINIIKVSAGGYHSIAISDNNDTYAWGRSDYGVLGTSIDVQGDRNLPVLINSNSVV 507
Query: 448 PRNI 451
N+
Sbjct: 508 VDNV 511
Score = 187 (70.9 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 57/198 (28%), Positives = 96/198 (48%)
Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG 322
+H G L+ Q + ++ +++ GG HS V+T+ G + +FG GQ G
Sbjct: 366 DHGRLGLGEQSLLMQSTPKLVQSLQGHFIIDMSSGGGHSLVLTNKGLVFSFGRNDQGQLG 425
Query: 323 HGS-TNDQLRP--------SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL 373
G +N Q P S I + +++AG +H++ IS Y +G + +G L
Sbjct: 426 IGCFSNQQTIPKQIQWFQTSQQQQQQPINIIKVSAGGYHSIAISDNNDTYAWGRSDYGVL 485
Query: 374 GTGVD-QAE-NVPKLLETP--ILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
GT +D Q + N+P L+ + ++++ + VS G +H+ ++ DG + SWG N GQ L
Sbjct: 486 GTSIDVQGDRNLPVLINSNSVVVDNVKFIDVSSGFQHNVAMSIDGSLYSWGCNA-GQR-L 543
Query: 430 GDSIDRNIPSLVPIHGFL 447
G D N L P F+
Sbjct: 544 GFKSDEN--QLTPKKCFI 559
Score = 149 (57.5 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 35/101 (34%), Positives = 54/101 (53%)
Query: 279 SVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPS---YA 335
S+ S + + I+ G HS+ +TD G L TFG GL G+ GHG+ P +
Sbjct: 178 SIGFSEMYNQQKIVLISTGAIHSSFITDQGNLYTFGDGLLGKLGHGNLESYSSPKLVEFF 237
Query: 336 SSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG 376
+ ++V IA G H++ +++ G+VY +GGN QLG G
Sbjct: 238 QTKPSLRVVSIANGGKHSLALTICGKVYSWGGNDSCQLGLG 278
Score = 145 (56.1 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 39/104 (37%), Positives = 58/104 (55%)
Query: 346 IAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRA-KVVSC-- 402
I+ G H+ I+ +G +Y FG G+LG G ++ + PKL+E ++K + +VVS
Sbjct: 193 ISTGAIHSSFITDQGNLYTFGDGLLGKLGHGNLESYSSPKLVE--FFQTKPSLRVVSIAN 250
Query: 403 GARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGF 446
G +HS LT G+V SWG N QLGLG+ + SL + F
Sbjct: 251 GGKHSLALTICGKVYSWGGNDSCQLGLGNGSSSSYYSLPQLINF 294
Score = 129 (50.5 bits), Expect = 2.9e-05, Sum P(3) = 2.9e-05
Identities = 36/115 (31%), Positives = 61/115 (53%)
Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA--ENVPKLL 387
L + +S+ I++ +++ G + I+ +G ++ FG G+LG G ++ PKL+
Sbjct: 327 LSQNSSSNNNKIKIVKLSCGTNRSAVITDKGLLFTFGRGDHGRLGLGEQSLLMQSTPKLV 386
Query: 388 ETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD-SIDRNIPSLV 441
++ L+ +S G HS VLT G V S+G N GQLG+G S + IP +
Sbjct: 387 QS--LQGHFIIDMSSGGGHSLVLTNKGLVFSFGRNDQGQLGIGCFSNQQTIPKQI 439
Score = 56 (24.8 bits), Expect = 2.9e-05, Sum P(3) = 2.9e-05
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQC----GHGSTN 327
V IA GG+HS +T G + + WG C G+GS++
Sbjct: 245 VVSIANGGKHSLALTICGKV--YSWGGNDSCQLGLGNGSSS 283
Score = 46 (21.3 bits), Expect = 6.5e-14, Sum P(2) = 6.5e-14
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ +V + G H +T+ G +YT+G
Sbjct: 187 QQKIVLISTGAIHSSFITDQGNLYTFG 213
Score = 41 (19.5 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 55 VCGGGCGFALATSESGKLITWGSAD 79
+ GG +LA + GK+ +WG D
Sbjct: 248 IANGG-KHSLALTICGKVYSWGGND 271
>TAIR|locus:2035423 [details] [associations]
symbol:AT1G19880 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 OMA:FGENKLG
IPI:IPI00543359 RefSeq:NP_173417.2 UniGene:At.16200
ProteinModelPortal:F4HQZ1 SMR:F4HQZ1 PRIDE:F4HQZ1
EnsemblPlants:AT1G19880.1 GeneID:838576 KEGG:ath:AT1G19880
Uniprot:F4HQZ1
Length = 538
Score = 199 (75.1 bits), Expect = 8.1e-13, P = 8.1e-13
Identities = 54/168 (32%), Positives = 84/168 (50%)
Query: 308 GALLTFG---WGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL--WHTVCISVEGRV 362
G LL G W + G+ + + P+ L+ + + +A G +H V + VEGR
Sbjct: 20 GELLFCGATAWDIIGKRKGAMEGNLVSPTRLRPLVGVNIRFVATGCASFHCVALDVEGRC 79
Query: 363 YVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWN 422
Y +G N+ GQLG G D + + + + + K K + G H+ V+++DGQ L +GWN
Sbjct: 80 YTWGRNEKGQLGHG-DMIQRDRPTVVSGLSKHKIVKAAA-GRNHTVVVSDDGQSLGFGWN 137
Query: 423 KYGQLGLGD------SIDRNIPSLVPIHGFLPRNIACGWWHTLLLAET 464
KYGQLGLG S++ L + N+ACG T+ L+ T
Sbjct: 138 KYGQLGLGSAKNGFVSVEVESTPLPCVVSDEVTNVACGADFTVWLSST 185
Score = 181 (68.8 bits), Expect = 8.1e-11, P = 8.1e-11
Identities = 50/147 (34%), Positives = 73/147 (49%)
Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVC 355
C H + G T+G GQ GHG + RP+ S L ++ + AAG HTV
Sbjct: 65 CASFHCVALDVEGRCYTWGRNEKGQLGHGDMIQRDRPTVVSGLSKHKIVKAAAGRNHTVV 124
Query: 356 ISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET---PILESKRAKVVSCGARHSAVL-- 410
+S +G+ FG N++GQLG G + V +E+ P + S V+CGA + L
Sbjct: 125 VSDDGQSLGFGWNKYGQLGLGSAKNGFVSVEVESTPLPCVVSDEVTNVACGADFTVWLSS 184
Query: 411 TEDGQVLSWGWNKYGQLGLGDSIDRNI 437
TE +L+ G +YGQLG G + N+
Sbjct: 185 TEGASILTAGLPQYGQLGHGTDNEFNM 211
Score = 167 (63.8 bits), Expect = 8.9e-14, Sum P(3) = 8.9e-14
Identities = 51/189 (26%), Positives = 89/189 (47%)
Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQ 345
AG + VK +ACG H+ V G + T+G+G YG+ GH D+ P V
Sbjct: 233 AGETIVK-VACGTNHTVAVDKNGYVYTWGFGGYGRLGHREQKDEWAPRRIDVFQRNNVLP 291
Query: 346 ----IAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVS 401
++AG ++ C + G++Y++G + G D P +++ L + +
Sbjct: 292 PNAILSAGSANSACTAGGGQLYMWGKIK----NNGDDWMYPKP-MMD---LSGWNLRWMD 343
Query: 402 CGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRN--IPSLVP-IHGFLPRNIACGWWHT 458
G+ H V D +SWG +YG+LG G + ++ P V + G +ACG+ H+
Sbjct: 344 SGSMHHFV-GADSSCISWGHAQYGELGYGPNGQKSSAAPKKVDMLEGMHVMGVACGFCHS 402
Query: 459 LLLAETTQI 467
+++ + T I
Sbjct: 403 MVIVDRTDI 411
Score = 143 (55.4 bits), Expect = 4.0e-11, Sum P(2) = 4.0e-11
Identities = 42/150 (28%), Positives = 69/150 (46%)
Query: 291 VKEIACGGRHSAVV--TDAGALLTFGWGLYGQCGHGSTND--------------QLRPSY 334
V +ACG + + T+ ++LT G YGQ GHG+ N+ Q RP
Sbjct: 169 VTNVACGADFTVWLSSTEGASILTAGLPQYGQLGHGTDNEFNMKDSSVRLAYEAQPRPKA 228
Query: 335 ASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILES 394
+SL + ++A G HTV + G VY +G +G+LG + E P+ ++ + +
Sbjct: 229 IASLAGETIVKVACGTNHTVAVDKNGYVYTWGFGGYGRLGHREQKDEWAPRRID--VFQR 286
Query: 395 KRA----KVVSCGARHSAVLTEDGQVLSWG 420
++S G+ +SA GQ+ WG
Sbjct: 287 NNVLPPNAILSAGSANSACTAGGGQLYMWG 316
Score = 133 (51.9 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 42/122 (34%), Positives = 59/122 (48%)
Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
+DRP +V SG + VK A G H+ VV+D G L FGW YGQ G GS +
Sbjct: 98 RDRPTVV-------SGLSKHKIVKA-AAGRNHTVVVSDDGQSLGFGWNKYGQLGLGSAKN 149
Query: 329 -----QLRPSYASSLMDIQVEQIAAGLWHTVCIS-VEGRVYVFGG-NQFGQLGTGVDQAE 381
++ + ++ +V +A G TV +S EG + G Q+GQLG G D
Sbjct: 150 GFVSVEVESTPLPCVVSDEVTNVACGADFTVWLSSTEGASILTAGLPQYGQLGHGTDNEF 209
Query: 382 NV 383
N+
Sbjct: 210 NM 211
Score = 87 (35.7 bits), Expect = 8.9e-14, Sum P(3) = 8.9e-14
Identities = 29/98 (29%), Positives = 48/98 (48%)
Query: 38 ILSPIPARLCGGDSWKDVCGGGCGF-ALATSESGKLITWGSADDEGQSYLTSGKHGETPE 96
++SP R G + + V G F +A G+ TWG +++GQ L G +
Sbjct: 44 LVSPTRLRPLVGVNIRFVATGCASFHCVALDVEGRCYTWGR-NEKGQ--LGHGDMIQRDR 100
Query: 97 PFPLP--TEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
P + ++ +VKAAAG H V V++ G+ +GW +
Sbjct: 101 PTVVSGLSKHKIVKAAAGRNHTVVVSDDGQSLGFGWNK 138
Score = 59 (25.8 bits), Expect = 6.5e-11, Sum P(2) = 6.5e-11
Identities = 18/53 (33%), Positives = 25/53 (47%)
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
V+ R + R E GD P +V+ KI K AAG HT+++SD
Sbjct: 75 VEGRCYTWGRNEKGQLGHGDMIQRDRPTVVSGLSKHKIVKAAAGRNHTVVVSD 127
Score = 57 (25.1 bits), Expect = 9.8e-11, Sum P(3) = 9.8e-11
Identities = 45/168 (26%), Positives = 65/168 (38%)
Query: 23 YMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDV-CGGGCGFALATSESGKLITWGSADD 80
Y WG G I P + G K V G + S+ G+ + +G +
Sbjct: 80 YTWGRNEKGQLGHGDMIQRDRPTVVSGLSKHKIVKAAAGRNHTVVVSDDGQSLGFGW-NK 138
Query: 81 EGQSYLTSGKHG-------ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
GQ L S K+G TP P + E + V A + +S TE + T G
Sbjct: 139 YGQLGLGSAKNGFVSVEVESTPLPCVVSDEVTNVACGADFTVWLSSTEGASILTAG---- 194
Query: 134 VPSAKVTRDFGSAGSFQ-KDSTGKQS--ALPTEQAPPSDKRAGEEVVK 178
+P G+ F KDS+ + + A P +A S AGE +VK
Sbjct: 195 LPQYGQL-GHGTDNEFNMKDSSVRLAYEAQPRPKAIAS--LAGETIVK 239
Score = 38 (18.4 bits), Expect = 8.9e-14, Sum P(3) = 8.9e-14
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 211 GVKITKVAAGGRHTL 225
G I KVA G HT+
Sbjct: 234 GETIVKVACGTNHTV 248
>DICTYBASE|DDB_G0284187 [details] [associations]
symbol:Dd5P2 "inositol 5-phosphatase" species:44689
"Dictyostelium discoideum" [GO:0046856 "phosphatidylinositol
dephosphorylation" evidence=IDA] [GO:0046855 "inositol phosphate
dephosphorylation" evidence=IDA] [GO:0034485
"phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity"
evidence=IDA] [GO:0004445 "inositol-polyphosphate 5-phosphatase
activity" evidence=IDA] [GO:0004439
"phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity"
evidence=IDA] [GO:0046854 "phosphatidylinositol phosphorylation"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000300 SMART:SM00128 dictyBase:DDB_G0284187
INTERPRO:IPR000408 Pfam:PF00415 GenomeReviews:CM000153_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR005135
SUPFAM:SSF56219 EMBL:AAFI02000064 GO:GO:0046854 GO:GO:0046855
GO:GO:0004439 GO:GO:0046856 GO:GO:0004445 eggNOG:COG5411
GO:GO:0034485 RefSeq:XP_638694.1 ProteinModelPortal:Q54PV1
EnsemblProtists:DDB0191414 GeneID:8624525 KEGG:ddi:DDB_G0284187
InParanoid:Q54PV1 OMA:SHEKMER Uniprot:Q54PV1
Length = 1800
Score = 183 (69.5 bits), Expect = 1.8e-08, Sum P(3) = 1.8e-08
Identities = 50/167 (29%), Positives = 82/167 (49%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
V ++CG H+ ++T + + G+ GQ G + D P +L V +I AG
Sbjct: 76 VVSVSCGFNHTLLLTSEYKIFSMGFNQTGQLGIENVVDSAVPLPVDTLSKFNVIKIKAGN 135
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAE----------N--VPKL-LETPILESKRA 397
+ I+ G +Y +G + +GQLG G A+ N +P + PI ++ +
Sbjct: 136 NVSAAITEAGDLYCWGSSAYGQLGNGKMNAKLHSFTPTTILNPLIPDAEKDDPIYQNLQY 195
Query: 398 KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIH 444
+ GA+H+ ++ G + SWG N+YGQLGLG + +P VPIH
Sbjct: 196 TNICFGAQHTIAISTTGAIFSWGSNQYGQLGLGHCNAKLVP--VPIH 240
Score = 179 (68.1 bits), Expect = 9.3e-14, Sum P(2) = 9.3e-14
Identities = 57/200 (28%), Positives = 89/200 (44%)
Query: 212 VKITKVAAGGRHTLILSDMXXXXX-XXXXXXXXXXXXSRIKMVPTP-HLIPCLEHAASGK 269
++ T + G +HT+ +S K+VP P HL E A
Sbjct: 193 LQYTNICFGAQHTIAISTTGAIFSWGSNQYGQLGLGHCNAKLVPVPIHLDNSFERRAGHI 252
Query: 270 DRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQ 329
+ L + + + K V +IACG HSA++T G L +G YGQ G G + DQ
Sbjct: 253 NS--LGEIVTTDFTAKTIHRIVVDIACGNFHSALLTLEGDLFLWGSNQYGQLGQGDSLDQ 310
Query: 330 LRP-SYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAEN---VPK 385
P + SL +++ ++A G HT+ ++ E V+ FG N+F QLG G +N P
Sbjct: 311 SVPKTVKGSLEFVKINRMALGNNHTILLTKEQDVFTFGSNEFYQLGHGSIGGKNRLYFPT 370
Query: 386 LLETP-ILESKRAKVVSCGA 404
++ P ++ S C A
Sbjct: 371 QIQKPKVMASDIFAAGDCSA 390
Score = 154 (59.3 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 35/118 (29%), Positives = 67/118 (56%)
Query: 320 QCGH-GSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
+ GH S + + + + + V IA G +H+ +++EG ++++G NQ+GQLG G
Sbjct: 248 RAGHINSLGEIVTTDFTAKTIHRIVVDIACGNFHSALLTLEGDLFLWGSNQYGQLGQGDS 307
Query: 379 QAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRN 436
++VPK ++ LE + ++ G H+ +LT++ V ++G N++ QLG G +N
Sbjct: 308 LDQSVPKTVKGS-LEFVKINRMALGNNHTILLTKEQDVFTFGSNEFYQLGHGSIGGKN 364
Score = 140 (54.3 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 30/70 (42%), Positives = 45/70 (64%)
Query: 400 VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIH-GFLPRN-IACGWWH 457
++CG HSA+LT +G + WG N+YGQLG GDS+D+++P V F+ N +A G H
Sbjct: 275 IACGNFHSALLTLEGDLFLWGSNQYGQLGQGDSLDQSVPKTVKGSLEFVKINRMALGNNH 334
Query: 458 TLLLAETTQI 467
T+LL + +
Sbjct: 335 TILLTKEQDV 344
Score = 87 (35.7 bits), Expect = 9.3e-14, Sum P(2) = 9.3e-14
Identities = 27/82 (32%), Positives = 40/82 (48%)
Query: 52 WKD-VCGGGCGF---ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVV 107
WK V CGF L TSE K+ + G + GQ + + P P ++ +V+
Sbjct: 72 WKRRVVSVSCGFNHTLLLTSEY-KIFSMGF-NQTGQLGIENVVDSAVPLPVDTLSKFNVI 129
Query: 108 KAAAGWAHCVSVTEAGEVYTWG 129
K AG ++TEAG++Y WG
Sbjct: 130 KIKAGNNVSAAITEAGDLYCWG 151
Score = 60 (26.2 bits), Expect = 5.8e-11, Sum P(2) = 5.8e-11
Identities = 20/85 (23%), Positives = 34/85 (40%)
Query: 59 GCGFALATSESGKLITWGSA--DDEGQSYLTSGKHGETPEPF--PLPTEAS--------- 105
G + A +E+G L WGS+ G + + H TP PL +A
Sbjct: 134 GNNVSAAITEAGDLYCWGSSAYGQLGNGKMNAKLHSFTPTTILNPLIPDAEKDDPIYQNL 193
Query: 106 -VVKAAAGWAHCVSVTEAGEVYTWG 129
G H ++++ G +++WG
Sbjct: 194 QYTNICFGAQHTIAISTTGAIFSWG 218
Score = 48 (22.0 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 20/76 (26%), Positives = 33/76 (43%)
Query: 52 WKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
+ ++C G +A S +G + +WGS + GQ L G P P+ + S + A
Sbjct: 195 YTNICFGA-QHTIAISTTGAIFSWGS-NQYGQ--LGLGHCNAKLVPVPIHLDNSFERRAG 250
Query: 112 GWAHCVSVTEAGEVYT 127
H + GE+ T
Sbjct: 251 ---H---INSLGEIVT 260
Score = 38 (18.4 bits), Expect = 1.8e-08, Sum P(3) = 1.8e-08
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 429 LGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLL 461
LG+ + + + IH + +IACG +H+ LL
Sbjct: 255 LGEIVTTDFTAKT-IHRIVV-DIACGNFHSALL 285
Score = 37 (18.1 bits), Expect = 1.8e-08, Sum P(3) = 1.8e-08
Identities = 6/16 (37%), Positives = 11/16 (68%)
Query: 213 KITKVAAGGRHTLILS 228
++ V+ G HTL+L+
Sbjct: 75 RVVSVSCGFNHTLLLT 90
>UNIPROTKB|C9JW69 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 IPI:IPI00787306
ProteinModelPortal:C9JW69 SMR:C9JW69 STRING:C9JW69
Ensembl:ENST00000411533 ArrayExpress:C9JW69 Bgee:C9JW69
Uniprot:C9JW69
Length = 372
Score = 203 (76.5 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 58/154 (37%), Positives = 87/154 (56%)
Query: 295 ACGGRHSAVVTDAGALLTFGWGLYGQCGHG-STNDQLRPSYASSLMDIQVEQIAAGLWHT 353
+C H + T+ G +LT G G GQ G G + ++ +P+ S D+ V+ A G+ HT
Sbjct: 39 SCQVSHRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDV-VQAEAGGM-HT 96
Query: 354 VCISVEGRVYVFGGNQFGQLG--TGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLT 411
VC+S G+VY FG N G LG T V+ +E VP +E L+ K +V S G H+A LT
Sbjct: 97 VCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVE---LQEKVVQV-SAGDSHTAALT 152
Query: 412 EDGQVLSWGW--NKYGQLGLGDSIDRNIPSLVPI 443
+DG+V WG + G +GL + + + S+VP+
Sbjct: 153 DDGRVFLWGSFRDNNGVIGLLEPMKK---SMVPV 183
Score = 172 (65.6 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 86/346 (24%), Positives = 136/346 (39%)
Query: 66 TSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
++E G ++T G D GQ L G++ E +P + VV+A AG H V ++++G+
Sbjct: 48 STEPGLVLTLGQGD-VGQ--LGLGENVMERKKPALVSIPEDVVQAEAGGMHTVCLSKSGQ 104
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK-QSALPTEQAPPSDKRAGEEVVKRRKTS 183
VY++G C + RD GS + GK + Q D R
Sbjct: 105 VYSFG---CNDEGALGRDTSVEGS--EMVPGKVELQEKVVQVSAGDSHTAALTDDGRVFL 159
Query: 184 SAREESENPASGD-EFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMXXXXXXXXXXXX 242
N G E S V + V + KVA+G H ++L+
Sbjct: 160 WGSFRDNNGVIGLLEPMKKSMVPVQVQLDVPVVKVASGNDHLVMLT---ADGDLYTLGCG 216
Query: 243 XXXXXSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSA 302
R+ P L G +R L+ + + S G G ++ CG +
Sbjct: 217 EQGQLGRV-----PELF-ANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTF 270
Query: 303 VVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQI--AAGLWHTVCISVEG 360
++ G + FG Y Q G T P +S + + + G HTVC+ EG
Sbjct: 271 AISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEG 330
Query: 361 RVYVFGGNQFGQLGTGVDQAE-NVPKLLET-PILESKRAKVVSCGA 404
+ Y G ++G+LG G E ++P L+ P + S V+CGA
Sbjct: 331 KAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAVSS-----VACGA 371
Score = 152 (58.6 bits), Expect = 5.0e-13, Sum P(2) = 5.0e-13
Identities = 55/184 (29%), Positives = 86/184 (46%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGH--------GSTNDQLRPSYASSLM--- 339
V ++A G H ++T G L T G G GQ G G R +M
Sbjct: 191 VVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKS 250
Query: 340 -----DIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILES 394
++ + G + T IS EG VY FG + + QLGT ++ +P+ L T S
Sbjct: 251 RGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNL-TSFKNS 309
Query: 395 KRAKV-VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSID-RNIPSLVPIHGFLPR--N 450
++ V S G H+ + +G+ S G +YG+LGLG+ + ++IP+L+ LP +
Sbjct: 310 TKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLI---SRLPAVSS 366
Query: 451 IACG 454
+ACG
Sbjct: 367 VACG 370
Score = 120 (47.3 bits), Expect = 0.00024, P = 0.00024
Identities = 39/143 (27%), Positives = 69/143 (48%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST--NDQLRPSYASSLMDIQVEQIAA 348
V + GG H+ ++ +G + +FG G G ++ ++ P + +V Q++A
Sbjct: 86 VVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVE--LQEKVVQVSA 143
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI---LESKRAKVVSCGAR 405
G HT ++ +GRV+++G F + E + K + P+ L+ KV S G
Sbjct: 144 GDSHTAALTDDGRVFLWGS--FRDNNGVIGLLEPMKKSM-VPVQVQLDVPVVKVAS-GND 199
Query: 406 HSAVLTEDGQVLSWGWNKYGQLG 428
H +LT DG + + G + GQLG
Sbjct: 200 HLVMLTADGDLYTLGCGEQGQLG 222
Score = 90 (36.7 bits), Expect = 5.0e-13, Sum P(2) = 5.0e-13
Identities = 26/95 (27%), Positives = 46/95 (48%)
Query: 35 KSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGET 94
K P L IP + ++ GG + S+SG++ ++G +DEG + G
Sbjct: 75 KKPALVSIPEDVVQAEA------GGM-HTVCLSKSGQVYSFG-CNDEGALGRDTSVEGSE 126
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P + + VV+ +AG +H ++T+ G V+ WG
Sbjct: 127 MVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLWG 161
>UNIPROTKB|Q74AS9 [details] [associations]
symbol:GSU2272 "ATS1 domain repeat lipoprotein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 RefSeq:NP_953321.1
ProteinModelPortal:Q74AS9 GeneID:2686981 KEGG:gsu:GSU2272
PATRIC:22027399 HOGENOM:HOG000020996 OMA:TGTALAW
BioCyc:GSUL243231:GH27-2248-MONOMER Uniprot:Q74AS9
Length = 403
Score = 177 (67.4 bits), Expect = 8.6e-11, Sum P(2) = 8.6e-11
Identities = 45/150 (30%), Positives = 69/150 (46%)
Query: 294 IACGGRHSAVVTDAGALLTFGWG--LYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW 351
I GG HS T A + WG GQ G+G+T P I + +I+AG
Sbjct: 198 IVAGGSHSIAYTSTEA---YAWGNNASGQLGNGTTLSNHMPQKVQLPSSITIRKISAGGS 254
Query: 352 HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLT 411
H + + G ++ +G N +GQLG G ++ P L P + V + G HS +
Sbjct: 255 HNLALDSTGAIWAWGSNAYGQLGNGTTTNQSTPVQLTLPAGVTGFIDVFA-GPSHSVAVA 313
Query: 412 EDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
+ V +WG+N G L +G + D+ P+ V
Sbjct: 314 SNFTVYTWGFNTLGLLSVGTTGDQLSPAQV 343
Score = 173 (66.0 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 48/159 (30%), Positives = 76/159 (47%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ-VEQIAAG 349
+++I+ GG H+ + GA+ +G YGQ G+G+T +Q P + + + AG
Sbjct: 246 IRKISAGGSHNLALDSTGAIWAWGSNAYGQLGNGTTTNQSTPVQLTLPAGVTGFIDVFAG 305
Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGV--DQAE--NVPKLLETPILESKRAKVVSCGAR 405
H+V ++ VY +G N G L G DQ V P + +R VV G+
Sbjct: 306 PSHSVAVASNFTVYTWGFNTLGLLSVGTTGDQLSPAQVRDASNVPFTDVER--VVLLGSF 363
Query: 406 HSAVLTE-DGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
+ V G + +WG+N YGQLG G + +R P V +
Sbjct: 364 FTIVKKNGSGGMWAWGYNGYGQLGDGTTSNRTAPVQVAL 402
Score = 173 (66.0 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 57/204 (27%), Positives = 94/204 (46%)
Query: 268 GKDRPLLVRQGS--VNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGS 325
G+D P V S V G G V+++A GG HS + G + +G GQ
Sbjct: 119 GRD-PATVPTSSTPVKIGGFGGA--VQQVAAGGLHSMALA-GGTVWAWGSNSAGQLALNP 174
Query: 326 TNDQLR--PSYASSL-MDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAEN 382
+ R P + + I I AG H++ + Y +G N GQLG G + +
Sbjct: 175 ISSATRFAPRQVETAKLPIAPTAIVAGGSHSIAYT-STEAYAWGNNASGQLGNGTTLSNH 233
Query: 383 VPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS--L 440
+P+ ++ P S + +S G H+ L G + +WG N YGQLG G + +++ P
Sbjct: 234 MPQKVQLP--SSITIRKISAGGSHNLALDSTGAIWAWGSNAYGQLGNGTTTNQSTPVQLT 291
Query: 441 VP--IHGFLPRNIACGWWHTLLLA 462
+P + GF+ ++ G H++ +A
Sbjct: 292 LPAGVTGFI--DVFAGPSHSVAVA 313
Score = 142 (55.0 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 41/128 (32%), Positives = 63/128 (49%)
Query: 343 VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG-VDQAEN-VPKLLETPILESKRAKVV 400
V+Q+AAG H++ ++ G V+ +G N GQL + A P+ +ET L +V
Sbjct: 141 VQQVAAGGLHSMALA-GGTVWAWGSNSAGQLALNPISSATRFAPRQVETAKLPIAPTAIV 199
Query: 401 SCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLP-RNIACGWWHTL 459
+ G HS T + +WG N GQLG G ++ ++P V + + R I+ G H L
Sbjct: 200 A-GGSHSIAYTST-EAYAWGNNASGQLGNGTTLSNHMPQKVQLPSSITIRKISAGGSHNL 257
Query: 460 LLAETTQI 467
L T I
Sbjct: 258 ALDSTGAI 265
Score = 117 (46.2 bits), Expect = 0.00060, P = 0.00060
Identities = 54/176 (30%), Positives = 67/176 (38%)
Query: 300 HSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCIS-- 357
HSAV + L +G GQ G G+T P A G HT+ I+
Sbjct: 42 HSAVFQNMTTLAVWGNNESGQLGDGTTTSAATPKRLRLGFATYSSGFATGASHTLAIARF 101
Query: 358 --VEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESK---RAKVVSCGARHSAVLTE 412
V G V +G N GQ+G D A VP TP+ + V+ G HS L
Sbjct: 102 DNVSG-VRAWGSNSAGQIGR--DPA-TVPTS-STPVKIGGFGGAVQQVAAGGLHSMALA- 155
Query: 413 DGQVLSWGWNKYGQLGLG--DSIDRNIPSLVPIHGF--LPRNIACGWWHTLLLAET 464
G V +WG N GQL L S R P V P I G H++ T
Sbjct: 156 GGTVWAWGSNSAGQLALNPISSATRFAPRQVETAKLPIAPTAIVAGGSHSIAYTST 211
Score = 103 (41.3 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 31/110 (28%), Positives = 51/110 (46%)
Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSY---ASSLMDIQ 342
AG + ++ G HS V + T+G+ G G+T DQL P+ AS++
Sbjct: 294 AGVTGFIDVFAGPSHSVAVASNFTVYTWGFNTLGLLSVGTTGDQLSPAQVRDASNVPFTD 353
Query: 343 VEQIAA-GLWHTVCI-SVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETP 390
VE++ G + T+ + G ++ +G N +GQLG G P + P
Sbjct: 354 VERVVLLGSFFTIVKKNGSGGMWAWGYNGYGQLGDGTTSNRTAPVQVALP 403
Score = 80 (33.2 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 19/75 (25%), Positives = 36/75 (48%)
Query: 55 VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWA 114
V GG A ++E+ WG+ + GQ + P+ LP+ ++ K +AG +
Sbjct: 199 VAGGSHSIAYTSTEA---YAWGN-NASGQLGNGTTLSNHMPQKVQLPSSITIRKISAGGS 254
Query: 115 HCVSVTEAGEVYTWG 129
H +++ G ++ WG
Sbjct: 255 HNLALDSTGAIWAWG 269
Score = 74 (31.1 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 57/220 (25%), Positives = 82/220 (37%)
Query: 20 TVVYMWGYLP-GTSPEKSPILSPIPARL-CGGDSWKDVCGGGCGFALATSE----SGKLI 73
T + +WG G + + + P RL G ++ G LA + SG +
Sbjct: 50 TTLAVWGNNESGQLGDGTTTSAATPKRLRLGFATYSSGFATGASHTLAIARFDNVSG-VR 108
Query: 74 TWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVK-AAAGWAHCVSVTEAGEVYTWGWRE 132
WGS + GQ + P + V+ AAG H +++ G V+ WG
Sbjct: 109 AWGS-NSAGQIGRDPATVPTSSTPVKIGGFGGAVQQVAAGGLHSMALA-GGTVWAWGSNS 166
Query: 133 CVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENP 192
A SA F + + LP AP + G + TS+ N
Sbjct: 167 AGQLA--LNPISSATRFAPRQV-ETAKLPI--APTAIVAGGSHSIAY--TSTEAYAWGNN 219
Query: 193 ASGD--EFFTLS---PCLVTLNPGVKITKVAAGGRHTLIL 227
ASG TLS P V L + I K++AGG H L L
Sbjct: 220 ASGQLGNGTTLSNHMPQKVQLPSSITIRKISAGGSHNLAL 259
Score = 42 (19.8 bits), Expect = 8.6e-11, Sum P(2) = 8.6e-11
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 211 GVKITKVAAGGRHTLILS 228
G + +VAAGG H++ L+
Sbjct: 138 GGAVQQVAAGGLHSMALA 155
>TIGR_CMR|GSU_2272 [details] [associations]
symbol:GSU_2272 "lipoprotein, putative" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 RefSeq:NP_953321.1
ProteinModelPortal:Q74AS9 GeneID:2686981 KEGG:gsu:GSU2272
PATRIC:22027399 HOGENOM:HOG000020996 OMA:TGTALAW
BioCyc:GSUL243231:GH27-2248-MONOMER Uniprot:Q74AS9
Length = 403
Score = 177 (67.4 bits), Expect = 8.6e-11, Sum P(2) = 8.6e-11
Identities = 45/150 (30%), Positives = 69/150 (46%)
Query: 294 IACGGRHSAVVTDAGALLTFGWG--LYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW 351
I GG HS T A + WG GQ G+G+T P I + +I+AG
Sbjct: 198 IVAGGSHSIAYTSTEA---YAWGNNASGQLGNGTTLSNHMPQKVQLPSSITIRKISAGGS 254
Query: 352 HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLT 411
H + + G ++ +G N +GQLG G ++ P L P + V + G HS +
Sbjct: 255 HNLALDSTGAIWAWGSNAYGQLGNGTTTNQSTPVQLTLPAGVTGFIDVFA-GPSHSVAVA 313
Query: 412 EDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
+ V +WG+N G L +G + D+ P+ V
Sbjct: 314 SNFTVYTWGFNTLGLLSVGTTGDQLSPAQV 343
Score = 173 (66.0 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 48/159 (30%), Positives = 76/159 (47%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ-VEQIAAG 349
+++I+ GG H+ + GA+ +G YGQ G+G+T +Q P + + + AG
Sbjct: 246 IRKISAGGSHNLALDSTGAIWAWGSNAYGQLGNGTTTNQSTPVQLTLPAGVTGFIDVFAG 305
Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGV--DQAE--NVPKLLETPILESKRAKVVSCGAR 405
H+V ++ VY +G N G L G DQ V P + +R VV G+
Sbjct: 306 PSHSVAVASNFTVYTWGFNTLGLLSVGTTGDQLSPAQVRDASNVPFTDVER--VVLLGSF 363
Query: 406 HSAVLTE-DGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
+ V G + +WG+N YGQLG G + +R P V +
Sbjct: 364 FTIVKKNGSGGMWAWGYNGYGQLGDGTTSNRTAPVQVAL 402
Score = 173 (66.0 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 57/204 (27%), Positives = 94/204 (46%)
Query: 268 GKDRPLLVRQGS--VNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGS 325
G+D P V S V G G V+++A GG HS + G + +G GQ
Sbjct: 119 GRD-PATVPTSSTPVKIGGFGGA--VQQVAAGGLHSMALA-GGTVWAWGSNSAGQLALNP 174
Query: 326 TNDQLR--PSYASSL-MDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAEN 382
+ R P + + I I AG H++ + Y +G N GQLG G + +
Sbjct: 175 ISSATRFAPRQVETAKLPIAPTAIVAGGSHSIAYT-STEAYAWGNNASGQLGNGTTLSNH 233
Query: 383 VPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS--L 440
+P+ ++ P S + +S G H+ L G + +WG N YGQLG G + +++ P
Sbjct: 234 MPQKVQLP--SSITIRKISAGGSHNLALDSTGAIWAWGSNAYGQLGNGTTTNQSTPVQLT 291
Query: 441 VP--IHGFLPRNIACGWWHTLLLA 462
+P + GF+ ++ G H++ +A
Sbjct: 292 LPAGVTGFI--DVFAGPSHSVAVA 313
Score = 142 (55.0 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 41/128 (32%), Positives = 63/128 (49%)
Query: 343 VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG-VDQAEN-VPKLLETPILESKRAKVV 400
V+Q+AAG H++ ++ G V+ +G N GQL + A P+ +ET L +V
Sbjct: 141 VQQVAAGGLHSMALA-GGTVWAWGSNSAGQLALNPISSATRFAPRQVETAKLPIAPTAIV 199
Query: 401 SCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLP-RNIACGWWHTL 459
+ G HS T + +WG N GQLG G ++ ++P V + + R I+ G H L
Sbjct: 200 A-GGSHSIAYTST-EAYAWGNNASGQLGNGTTLSNHMPQKVQLPSSITIRKISAGGSHNL 257
Query: 460 LLAETTQI 467
L T I
Sbjct: 258 ALDSTGAI 265
Score = 117 (46.2 bits), Expect = 0.00060, P = 0.00060
Identities = 54/176 (30%), Positives = 67/176 (38%)
Query: 300 HSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCIS-- 357
HSAV + L +G GQ G G+T P A G HT+ I+
Sbjct: 42 HSAVFQNMTTLAVWGNNESGQLGDGTTTSAATPKRLRLGFATYSSGFATGASHTLAIARF 101
Query: 358 --VEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESK---RAKVVSCGARHSAVLTE 412
V G V +G N GQ+G D A VP TP+ + V+ G HS L
Sbjct: 102 DNVSG-VRAWGSNSAGQIGR--DPA-TVPTS-STPVKIGGFGGAVQQVAAGGLHSMALA- 155
Query: 413 DGQVLSWGWNKYGQLGLG--DSIDRNIPSLVPIHGF--LPRNIACGWWHTLLLAET 464
G V +WG N GQL L S R P V P I G H++ T
Sbjct: 156 GGTVWAWGSNSAGQLALNPISSATRFAPRQVETAKLPIAPTAIVAGGSHSIAYTST 211
Score = 103 (41.3 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 31/110 (28%), Positives = 51/110 (46%)
Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSY---ASSLMDIQ 342
AG + ++ G HS V + T+G+ G G+T DQL P+ AS++
Sbjct: 294 AGVTGFIDVFAGPSHSVAVASNFTVYTWGFNTLGLLSVGTTGDQLSPAQVRDASNVPFTD 353
Query: 343 VEQIAA-GLWHTVCI-SVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETP 390
VE++ G + T+ + G ++ +G N +GQLG G P + P
Sbjct: 354 VERVVLLGSFFTIVKKNGSGGMWAWGYNGYGQLGDGTTSNRTAPVQVALP 403
Score = 80 (33.2 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 19/75 (25%), Positives = 36/75 (48%)
Query: 55 VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWA 114
V GG A ++E+ WG+ + GQ + P+ LP+ ++ K +AG +
Sbjct: 199 VAGGSHSIAYTSTEA---YAWGN-NASGQLGNGTTLSNHMPQKVQLPSSITIRKISAGGS 254
Query: 115 HCVSVTEAGEVYTWG 129
H +++ G ++ WG
Sbjct: 255 HNLALDSTGAIWAWG 269
Score = 74 (31.1 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 57/220 (25%), Positives = 82/220 (37%)
Query: 20 TVVYMWGYLP-GTSPEKSPILSPIPARL-CGGDSWKDVCGGGCGFALATSE----SGKLI 73
T + +WG G + + + P RL G ++ G LA + SG +
Sbjct: 50 TTLAVWGNNESGQLGDGTTTSAATPKRLRLGFATYSSGFATGASHTLAIARFDNVSG-VR 108
Query: 74 TWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVK-AAAGWAHCVSVTEAGEVYTWGWRE 132
WGS + GQ + P + V+ AAG H +++ G V+ WG
Sbjct: 109 AWGS-NSAGQIGRDPATVPTSSTPVKIGGFGGAVQQVAAGGLHSMALA-GGTVWAWGSNS 166
Query: 133 CVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENP 192
A SA F + + LP AP + G + TS+ N
Sbjct: 167 AGQLA--LNPISSATRFAPRQV-ETAKLPI--APTAIVAGGSHSIAY--TSTEAYAWGNN 219
Query: 193 ASGD--EFFTLS---PCLVTLNPGVKITKVAAGGRHTLIL 227
ASG TLS P V L + I K++AGG H L L
Sbjct: 220 ASGQLGNGTTLSNHMPQKVQLPSSITIRKISAGGSHNLAL 259
Score = 42 (19.8 bits), Expect = 8.6e-11, Sum P(2) = 8.6e-11
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 211 GVKITKVAAGGRHTLILS 228
G + +VAAGG H++ L+
Sbjct: 138 GGAVQQVAAGGLHSMALA 155
>UNIPROTKB|Q9UGK8 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0050709 "negative
regulation of protein secretion" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IDA] InterPro:IPR027048 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0007165 GO:GO:0005730
GO:GO:0045111 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005087 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0050709 eggNOG:COG5184 CTD:26297
HOGENOM:HOG000154414 HOVERGEN:HBG051746 KO:K15421 OMA:NIWAPKP
OrthoDB:EOG4J1183 PANTHER:PTHR22870:SF7 EMBL:AJ243950 EMBL:AJ243951
EMBL:BC065375 IPI:IPI00015919 IPI:IPI00383576 RefSeq:NP_036271.1
UniGene:Hs.32470 ProteinModelPortal:Q9UGK8 SMR:Q9UGK8 IntAct:Q9UGK8
STRING:Q9UGK8 PhosphoSite:Q9UGK8 DMDM:38257790 PaxDb:Q9UGK8
PeptideAtlas:Q9UGK8 PRIDE:Q9UGK8 Ensembl:ENST00000265965
Ensembl:ENST00000528200 GeneID:26297 KEGG:hsa:26297 UCSC:uc001mnm.3
UCSC:uc001mnn.3 GeneCards:GC11M017767 HGNC:HGNC:17499 HPA:HPA037811
MIM:606051 neXtProt:NX_Q9UGK8 PharmGKB:PA143485610
InParanoid:Q9UGK8 PhylomeDB:Q9UGK8 GenomeRNAi:26297 NextBio:48643
ArrayExpress:Q9UGK8 Bgee:Q9UGK8 CleanEx:HS_SERGEF
Genevestigator:Q9UGK8 GermOnline:ENSG00000129158 Uniprot:Q9UGK8
Length = 458
Score = 187 (70.9 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 56/154 (36%), Positives = 76/154 (49%)
Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
K+ LL +Q +N K RS V+ I GG HSAVVTD G L G GQ G G T D
Sbjct: 33 KEDVLLPQQ--LNDFCKP-RS-VRRITGGGGHSAVVTDGGDLFVCGLNKDGQLGLGHTED 88
Query: 329 QLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGT--GVDQAENVPKL 386
+ SL ++Q+A G T+ ++ G+V G N FGQLG G + VP+
Sbjct: 89 IPYFTPCKSLFGCPIQQVACGWDFTIMLTENGQVLSCGSNSFGQLGVPHGPRRCV-VPQA 147
Query: 387 LETPILESKRAKVVSCGARHSAVLTEDGQVLSWG 420
+E L ++ ++ G RH+ T G V WG
Sbjct: 148 IE---LHKEKVVCIAAGLRHAVAATASGIVFQWG 178
Score = 183 (69.5 bits), Expect = 5.8e-12, Sum P(2) = 5.8e-12
Identities = 56/185 (30%), Positives = 88/185 (47%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCG--HGSTNDQLRPSYASSLMDIQVEQIAA 348
++++ACG + ++T+ G +L+ G +GQ G HG + P A L +V IAA
Sbjct: 103 IQQVACGWDFTIMLTENGQVLSCGSNSFGQLGVPHGPRRCVV-PQ-AIELHKEKVVCIAA 160
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL--ETPI----LESKRAKVVSC 402
GL H V + G V+ +G G + + +P + P LE+ +A V
Sbjct: 161 GLRHAVAATASGIVFQWGTG-LASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLA 219
Query: 403 GARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIAC---GWWHTL 459
G+ HSA LT+ G+V WG NK+GQL ++ +P + H F + GW H +
Sbjct: 220 GSDHSASLTDAGEVYVWGSNKHGQLA-NEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLV 278
Query: 460 LLAET 464
ET
Sbjct: 279 AQTET 283
Score = 180 (68.4 bits), Expect = 7.7e-11, P = 7.7e-11
Identities = 52/155 (33%), Positives = 75/155 (48%)
Query: 307 AGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ-VEQIAAGLWHTVCISVEGRVYVF 365
A AL +G YGQ G G D L P + + V +I G H+ ++ G ++V
Sbjct: 14 AAALFAWGANSYGQLGLGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTDGGDLFVC 73
Query: 366 GGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYG 425
G N+ GQLG G E++P L + V+CG + +LTE+GQVLS G N +G
Sbjct: 74 GLNKDGQLGLG--HTEDIPYFTPCKSLFGCPIQQVACGWDFTIMLTENGQVLSCGSNSFG 131
Query: 426 QLGLGDSIDRNI-PSLVPIHGFLPRNIACGWWHTL 459
QLG+ R + P + +H IA G H +
Sbjct: 132 QLGVPHGPRRCVVPQAIELHKEKVVCIAAGLRHAV 166
Score = 162 (62.1 bits), Expect = 7.8e-09, P = 7.8e-09
Identities = 38/109 (34%), Positives = 60/109 (55%)
Query: 362 VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
++ +G N +GQLG G + +P+ L + + + ++ G HSAV+T+ G + G
Sbjct: 17 LFAWGANSYGQLGLGHKEDVLLPQQLND-FCKPRSVRRITGGGGHSAVVTDGGDLFVCGL 75
Query: 422 NKYGQLGLGDSIDRNIPSLVP---IHGFLPRNIACGWWHTLLLAETTQI 467
NK GQLGLG + D IP P + G + +ACGW T++L E Q+
Sbjct: 76 NKDGQLGLGHTED--IPYFTPCKSLFGCPIQQVACGWDFTIMLTENGQV 122
Score = 161 (61.7 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 44/143 (30%), Positives = 67/143 (46%)
Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGH----GSTNDQL----RPSYASSLMDIQVEQ 345
IA G RH+ T +G + +G GL CG G T PS + L + +
Sbjct: 158 IAAGLRHAVAATASGIVFQWGTGL-ASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMC 216
Query: 346 IAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGAR 405
+ AG H+ ++ G VYV+G N+ GQL VP+ +E ++++ + G
Sbjct: 217 VLAGSDHSASLTDAGEVYVWGSNKHGQLANEAAFLP-VPQKIEAHCFQNEKVTAIWSGWT 275
Query: 406 HSAVLTEDGQVLSWGWNKYGQLG 428
H TE G++ +WG YGQLG
Sbjct: 276 HLVAQTETGKMFTWGRADYGQLG 298
Score = 156 (60.0 bits), Expect = 6.4e-13, Sum P(2) = 6.4e-13
Identities = 55/224 (24%), Positives = 90/224 (40%)
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
L C G+ PL + S + G HSA +TDAG + +G
Sbjct: 181 LASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNK 240
Query: 318 YGQCGHGSTNDQLRPSY-ASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG 376
+GQ + + + A + +V I +G H V + G+++ +G +GQLG
Sbjct: 241 HGQLANEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLGRK 300
Query: 377 VDQAENVPKLLETPILESKR--------------AKVVSCGARHSAVLTEDGQVLSWGWN 422
++ E + L R A VSCG+ H+ + G SWGWN
Sbjct: 301 LETYEGWKLEKQDSFLPCSRPPNSMPSSPHCLTGATEVSCGSEHNLAII-GGVCYSWGWN 359
Query: 423 KYGQLGLGDSIDRNIPSLVPIHGFLPRN---IACGWWHTLLLAE 463
++G G D + N+ + P+ L + + CG H+L L +
Sbjct: 360 EHGMCG--DGTEANVWAPKPVQALLSSSGLLVGCGAGHSLALCQ 401
Score = 88 (36.0 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 30/97 (30%), Positives = 47/97 (48%)
Query: 34 EKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG-KHG 92
E P +P + L G + CG F + +E+G++++ GS + GQ + G +
Sbjct: 87 EDIPYFTPCKS-LFGCPIQQVACGWD--FTIMLTENGQVLSCGS-NSFGQLGVPHGPRRC 142
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P+ L E VV AAG H V+ T +G V+ WG
Sbjct: 143 VVPQAIELHKE-KVVCIAAGLRHAVAATASGIVFQWG 178
Score = 49 (22.3 bits), Expect = 5.8e-12, Sum P(2) = 5.8e-12
Identities = 17/66 (25%), Positives = 26/66 (39%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPF-PLPTEASVVKAAAGWAHCVSVTEAG 123
A + L WG A+ GQ L + P+ SV + G H VT+ G
Sbjct: 10 AAPAAAALFAWG-ANSYGQLGLGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTDGG 68
Query: 124 EVYTWG 129
+++ G
Sbjct: 69 DLFVCG 74
>ZFIN|ZDB-GENE-040426-2213 [details] [associations]
symbol:rcc2 "regulator of chromosome condensation
2" species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-040426-2213 GO:GO:0005730 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104160 EMBL:BC066628
IPI:IPI00486648 RefSeq:NP_998341.1 UniGene:Dr.828
ProteinModelPortal:Q6NYE2 STRING:Q6NYE2 PRIDE:Q6NYE2
Ensembl:ENSDART00000010647 GeneID:406455 KEGG:dre:406455 CTD:55920
HOGENOM:HOG000232061 HOVERGEN:HBG080538 InParanoid:Q6NYE2
OMA:FGENKLG OrthoDB:EOG4DNF4B NextBio:20818048 ArrayExpress:Q6NYE2
Bgee:Q6NYE2 Uniprot:Q6NYE2
Length = 495
Score = 185 (70.2 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 54/161 (33%), Positives = 79/161 (49%)
Query: 308 GALLTFG---WGLYG-------QCGHGSTNDQL-RPSYASSLMDIQVEQIAAG--LWHTV 354
G LL FG W L G Q + L P L D+QV + +G H++
Sbjct: 77 GQLLIFGATNWDLIGRKEVPKQQAAFRNLGQNLWGPHRYGCLSDVQVSCVVSGPCAAHSL 136
Query: 355 CISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDG 414
I+ EG+++ +G N GQLG G + PKL+E L + +CG H+ LTE+G
Sbjct: 137 IITTEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEG--LGEEVIVAAACGRNHTLALTENG 194
Query: 415 QVLSWGWNKYGQLGLGDSIDRNI-PSLVPIHGFLPRNIACG 454
V ++G NK GQLG G+ D + P+ + +G +ACG
Sbjct: 195 TVYTFGENKLGQLGQGNQTDAVLSPATIQYNGQPIVKVACG 235
Score = 180 (68.4 bits), Expect = 8.7e-12, Sum P(2) = 8.7e-12
Identities = 47/130 (36%), Positives = 67/130 (51%)
Query: 300 HSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVE 359
HS ++T G L ++G GQ GHG T P L + + A G HT+ ++
Sbjct: 134 HSLIITTEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEGLGEEVIVAAACGRNHTLALTEN 193
Query: 360 GRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKV-VSCGARHSAVLTEDGQVLS 418
G VY FG N+ GQLG G +Q + V L I + + V V+CGA S ++ G + S
Sbjct: 194 GTVYTFGENKLGQLGQG-NQTDAV--LSPATIQYNGQPIVKVACGAEFSMIVDCKGNLYS 250
Query: 419 WGWNKYGQLG 428
+G +YGQLG
Sbjct: 251 FGCPEYGQLG 260
Score = 145 (56.1 bits), Expect = 2.3e-13, Sum P(3) = 2.3e-13
Identities = 42/178 (23%), Positives = 84/178 (47%)
Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ---VEQIAA 348
+++ACG H+ V+ + ++G+G YG+ GH D++ P L D QI
Sbjct: 306 RDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVK-LFDFPGRGATQIYC 364
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
G + +S G ++ +G + T PK ++ L + + ++CG + S
Sbjct: 365 GYQCSFALSEMGGLFFWGVTNTSREST------MYPKAVQD--LCGWKIRSLACG-KSSI 415
Query: 409 VLTEDGQVLSWGWNK-YGQLGLGDSIDRNIPS---LVPIHGFLPRNIACGWWHTLLLA 462
++ D +SWG + +G+LG GD+ ++ + + + G + G+ H+L++A
Sbjct: 416 IVAADDSTISWGPSPTFGELGYGDNKPKSSTTAQEVKTLDGVYSEQVVMGYSHSLVIA 473
Score = 125 (49.1 bits), Expect = 2.0e-13, Sum P(3) = 2.0e-13
Identities = 26/92 (28%), Positives = 43/92 (46%)
Query: 287 GRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQI 346
G + ACG H+ +T+ G + TFG GQ G G+ D + + ++
Sbjct: 173 GEEVIVAAACGRNHTLALTENGTVYTFGENKLGQLGQGNQTDAVLSPATIQYNGQPIVKV 232
Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD 378
A G ++ + +G +Y FG ++GQLG D
Sbjct: 233 ACGAEFSMIVDCKGNLYSFGCPEYGQLGHNSD 264
Score = 122 (48.0 bits), Expect = 2.0e-13, Sum P(3) = 2.0e-13
Identities = 27/70 (38%), Positives = 39/70 (55%)
Query: 397 AKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN---IAC 453
A+ V+CGA H+ VL +V SWG+ YG+LG + D +P LV + F R I C
Sbjct: 305 ARDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYC 364
Query: 454 GWWHTLLLAE 463
G+ + L+E
Sbjct: 365 GYQCSFALSE 374
Score = 100 (40.3 bits), Expect = 2.3e-13, Sum P(3) = 2.3e-13
Identities = 28/76 (36%), Positives = 39/76 (51%)
Query: 55 VCGGGCG-FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGW 113
V G C +L + GKL +WG +D+GQ K E P+ E +V AA G
Sbjct: 126 VVSGPCAAHSLIITTEGKLWSWGR-NDKGQLGHGDTKRLEAPKLIEGLGEEVIVAAACGR 184
Query: 114 AHCVSVTEAGEVYTWG 129
H +++TE G VYT+G
Sbjct: 185 NHTLALTENGTVYTFG 200
Score = 59 (25.8 bits), Expect = 0.00032, Sum P(3) = 0.00032
Identities = 17/72 (23%), Positives = 31/72 (43%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWG---LYGQCGHGSTNDQLRPSY--ASSLMDIQVEQ 345
++ +ACG V D T WG +G+ G+G + + +L + EQ
Sbjct: 405 IRSLACGKSSIIVAADDS---TISWGPSPTFGELGYGDNKPKSSTTAQEVKTLDGVYSEQ 461
Query: 346 IAAGLWHTVCIS 357
+ G H++ I+
Sbjct: 462 VVMGYSHSLVIA 473
Score = 52 (23.4 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 9/22 (40%), Positives = 16/22 (72%)
Query: 440 LVPIHGFLPRNIACGWWHTLLL 461
++P+ + R++ACG HTL+L
Sbjct: 297 VLPVPNVVARDVACGANHTLVL 318
Score = 51 (23.0 bits), Expect = 2.1e-08, Sum P(3) = 2.1e-08
Identities = 22/82 (26%), Positives = 35/82 (42%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETP-EPFPLPTEAS-VVKAA 110
+ CG LA +E+G + T+G + GQ L G + P + +VK A
Sbjct: 177 IVAAACGRNHTLALTENGTVYTFGE-NKLGQ--LGQGNQTDAVLSPATIQYNGQPIVKVA 233
Query: 111 AGWAHCVSVTEAGEVYTWGWRE 132
G + V G +Y++G E
Sbjct: 234 CGAEFSMIVDCKGNLYSFGCPE 255
Score = 45 (20.9 bits), Expect = 2.0e-13, Sum P(3) = 2.0e-13
Identities = 8/27 (29%), Positives = 16/27 (59%)
Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ S V + AH + +T G++++WG
Sbjct: 122 QVSCVVSGPCAAHSLIITTEGKLWSWG 148
Score = 44 (20.5 bits), Expect = 2.3e-13, Sum P(3) = 2.3e-13
Identities = 9/18 (50%), Positives = 10/18 (55%)
Query: 210 PGVKITKVAAGGRHTLIL 227
P V VA G HTL+L
Sbjct: 301 PNVVARDVACGANHTLVL 318
Score = 37 (18.1 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 15/48 (31%), Positives = 22/48 (45%)
Query: 183 SSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR-HTLILSD 229
S R + GD +P L+ G ++ AA GR HTL L++
Sbjct: 146 SWGRNDKGQLGHGDTKRLEAPKLIE-GLGEEVIVAAACGRNHTLALTE 192
>UNIPROTKB|C9J3R0 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341
IPI:IPI00926548 ProteinModelPortal:C9J3R0 SMR:C9J3R0 STRING:C9J3R0
PRIDE:C9J3R0 Ensembl:ENST00000434290 ArrayExpress:C9J3R0
Bgee:C9J3R0 Uniprot:C9J3R0
Length = 273
Score = 192 (72.6 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 51/124 (41%), Positives = 72/124 (58%)
Query: 300 HSAVVTDAGALLTFGWGLYGQCGHG-STNDQLRPSYASSLMDIQVEQIAAGLWHTVCISV 358
H + T+ G +LT G G GQ G G + ++ +P+ S D+ V+ A G+ HTVC+S
Sbjct: 35 HRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDV-VQAEAGGM-HTVCLSK 92
Query: 359 EGRVYVFGGNQFGQLG--TGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQV 416
G+VY FG N G LG T V+ +E VP +E L+ K +V S G H+A LT+DG+V
Sbjct: 93 SGQVYSFGCNDEGALGRDTSVEGSEMVPGKVE---LQEKVVQV-SAGDSHTAALTDDGRV 148
Query: 417 LSWG 420
WG
Sbjct: 149 FLWG 152
Score = 97 (39.2 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 28/101 (27%), Positives = 50/101 (49%)
Query: 35 KSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGET 94
K P L IP + ++ GG + S+SG++ ++G +DEG + G
Sbjct: 66 KKPALVSIPEDVVQAEA------GGM-HTVCLSKSGQVYSFG-CNDEGALGRDTSVEGSE 117
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG-WRECV 134
P + + VV+ +AG +H ++T+ G V+ WG +R C+
Sbjct: 118 MVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLWGSFRHCL 158
Score = 82 (33.9 bits), Expect = 0.00020, Sum P(3) = 0.00020
Identities = 27/84 (32%), Positives = 44/84 (52%)
Query: 66 TSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
++E G ++T G D GQ L G++ E +P + VV+A AG H V ++++G+
Sbjct: 39 STEPGLVLTLGQGD-VGQ--LGLGENVMERKKPALVSIPEDVVQAEAGGMHTVCLSKSGQ 95
Query: 125 VYTWGWRECVPSAKVTRDFGSAGS 148
VY++G C + RD GS
Sbjct: 96 VYSFG---CNDEGALGRDTSVEGS 116
Score = 70 (29.7 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 13/36 (36%), Positives = 23/36 (63%)
Query: 339 MDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG 374
+D+ V ++A+G H V ++ +G +Y G + GQLG
Sbjct: 206 LDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLG 241
Score = 57 (25.1 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 400 VSCGARHSAVLTEDGQVLSWGWNKYGQLG 428
V+ G H +LT DG + + G + GQLG
Sbjct: 213 VASGNDHLVMLTADGDLYTLGCGEQGQLG 241
Score = 56 (24.8 bits), Expect = 0.00089, Sum P(2) = 0.00089
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCG 322
V ++A G H ++T G L T G G GQ G
Sbjct: 210 VVKVASGNDHLVMLTADGDLYTLGCGEQGQLG 241
Score = 44 (20.5 bits), Expect = 0.00020, Sum P(3) = 0.00020
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 213 KITKVAAGGRHTLILSD 229
K+ +V+AG HT L+D
Sbjct: 128 KVVQVSAGDSHTAALTD 144
>POMBASE|SPBC557.03c [details] [associations]
symbol:pim1 "Ran GDP/GTP exchange factor" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005087 "Ran guanyl-nucleotide exchange factor
activity" evidence=IGI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006406 "mRNA export from nucleus" evidence=IMP] [GO:0006407
"rRNA export from nucleus" evidence=ISO] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IMP] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IC] [GO:0007346 "regulation of
mitotic cell cycle" evidence=IMP] [GO:0030071 "regulation of
mitotic metaphase/anaphase transition" evidence=IMP] [GO:0031291
"Ran protein signal transduction" evidence=IGI] [GO:0032888
"regulation of mitotic spindle elongation" evidence=IMP]
[GO:0042992 "negative regulation of transcription factor import
into nucleus" evidence=IMP] [GO:0060623 "regulation of chromosome
condensation" evidence=IGI] [GO:1901673 "regulation of spindle
assembly involved in mitosis" evidence=IMP] PomBase:SPBC557.03c
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0051301 GO:GO:0030071
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0000790
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0006406
GO:GO:0090307 GO:GO:0005087 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0007093 eggNOG:COG5184
GO:GO:0060623 GO:GO:0042992 GO:GO:0006407 GO:GO:0031291 EMBL:M73528
PIR:B40039 PIR:T50368 RefSeq:NP_596026.1 ProteinModelPortal:P28745
STRING:P28745 EnsemblFungi:SPBC557.03c.1 GeneID:2541059
KEGG:spo:SPBC557.03c HOGENOM:HOG000170207 OMA:KGIVYAW
OrthoDB:EOG466ZVF NextBio:20802173 Uniprot:P28745
Length = 539
Score = 173 (66.0 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 57/208 (27%), Positives = 96/208 (46%)
Query: 270 DRPLLVRQGSVNS-SGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGS--- 325
D LL +G+ + G V ++ C +A +TD G T WG + +C G
Sbjct: 156 DNDLL--EGTPSKVEGALSHLRVTKVICSDNLTAAITDNGCCFT--WGTF-RCSDGVLGY 210
Query: 326 TNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPK 385
++ Q R + + + ++ Q+A G H + ++ G+VY +G Q QLG + + +
Sbjct: 211 SDSQKRTAEPTQMRLPEICQLATGTDHIIALTTTGKVYTWGNGQQFQLGRRMLERRRLQG 270
Query: 386 LLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG--DSIDRNI---PSL 440
L P L K V G+ HS + G+V +WG N Q G+ D + + P+L
Sbjct: 271 LTPQP-LALKNIISVGAGSYHSFAIDNKGRVYAWGLNITRQCGIEVEDEEEGAVITKPTL 329
Query: 441 VP-IHGFLPRNIACGWWHTLLLAETTQI 467
V + G+ ++I G HTL L E ++
Sbjct: 330 VDALEGYNVKSITGGEHHTLALLEDGRV 357
Score = 157 (60.3 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 48/165 (29%), Positives = 77/165 (46%)
Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQ-----LRPSYASSLMDIQVEQIAA 348
+ G HS + + G + +G + QCG +++ +P+ +L V+ I
Sbjct: 284 VGAGSYHSFAIDNKGRVYAWGLNITRQCGIEVEDEEEGAVITKPTLVDALEGYNVKSITG 343
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA--ENVPK-------LLETPILESKRAKV 399
G HT+ + +GRV +G + QLG D A E V K L TP + V
Sbjct: 344 GEHHTLALLEDGRVLAWGRDDRHQLGIP-DNALPETVVKDEKGNNYYLSTPTIIPGLTNV 402
Query: 400 VS--CGARHSAVLTEDGQVLSWGWNKYGQLGLGDSI-DRNIPSLV 441
+ CG H+ +T DG+V SWG + ++G GD+ D +P+LV
Sbjct: 403 IQVVCGTHHNLAVTSDGKVYSWGSAENYEVGQGDNDEDVAVPTLV 447
Score = 156 (60.0 bits), Expect = 8.2e-11, Sum P(2) = 8.2e-11
Identities = 42/144 (29%), Positives = 67/144 (46%)
Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ-VEQIAAGLW 351
++A G H +T G + T+G G Q G + + ++ + + AG +
Sbjct: 230 QLATGTDHIIALTTTGKVYTWGNGQQFQLGRRMLERRRLQGLTPQPLALKNIISVGAGSY 289
Query: 352 HTVCISVEGRVYVFGGNQFGQLGTGVDQAEN---VPKLLETPILESKRAKVVSCGARHSA 408
H+ I +GRVY +G N Q G V+ E + K LE K ++ G H+
Sbjct: 290 HSFAIDNKGRVYAWGLNITRQCGIEVEDEEEGAVITKPTLVDALEGYNVKSITGGEHHTL 349
Query: 409 VLTEDGQVLSWGWNKYGQLGLGDS 432
L EDG+VL+WG + QLG+ D+
Sbjct: 350 ALLEDGRVLAWGRDDRHQLGIPDN 373
Score = 93 (37.8 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 24/79 (30%), Positives = 35/79 (44%)
Query: 53 KDVCGGGCGFALATSESGKLITWGS--ADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
K +C A +++G TWG+ D Y S K P LP + + A
Sbjct: 178 KVICSDN--LTAAITDNGCCFTWGTFRCSDGVLGYSDSQKRTAEPTQMRLP---EICQLA 232
Query: 111 AGWAHCVSVTEAGEVYTWG 129
G H +++T G+VYTWG
Sbjct: 233 TGTDHIIALTTTGKVYTWG 251
Score = 70 (29.7 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 17/53 (32%), Positives = 25/53 (47%)
Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTG 155
+ VV A G H +++ G VYTWG + ++T+D QKD G
Sbjct: 107 KVGVVDLAVGGMHSAALSHDGRVYTWGVNDDYALGRLTKD-------QKDENG 152
Score = 63 (27.2 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 25/93 (26%), Positives = 36/93 (38%)
Query: 54 DVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT-EASVVKAAAG 112
D+ GG A A S G++ TWG DD LT + E + E + K
Sbjct: 112 DLAVGGMHSA-ALSHDGRVYTWGVNDDYALGRLTKDQKDENGDKVDNDLLEGTPSKVEGA 170
Query: 113 WAH-------C-----VSVTEAGEVYTWGWREC 133
+H C ++T+ G +TWG C
Sbjct: 171 LSHLRVTKVICSDNLTAAITDNGCCFTWGTFRC 203
Score = 41 (19.5 bits), Expect = 3.5e-08, Sum P(3) = 3.5e-08
Identities = 12/28 (42%), Positives = 15/28 (53%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILS 228
L+P L T GV +A GG H+ LS
Sbjct: 99 LNPILSTDKVGV--VDLAVGGMHSAALS 124
Score = 40 (19.1 bits), Expect = 3.5e-08, Sum P(3) = 3.5e-08
Identities = 13/56 (23%), Positives = 23/56 (41%)
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPAS 194
+T + + S +++ K E + G++ VKR K SS + P S
Sbjct: 1 MTSNRSTRSSTKREEVSKNGVEKRELDESDVMKNGKKPVKRAKVSSLPKPVRVPGS 56
>ZFIN|ZDB-GENE-061220-11 [details] [associations]
symbol:sergef "secretion regulating guanine
nucleotide exchange factor" species:7955 "Danio rerio" [GO:0050709
"negative regulation of protein secretion" evidence=IEA]
InterPro:IPR027048 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-061220-11 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 HOGENOM:HOG000154414 HOVERGEN:HBG051746
OrthoDB:EOG4J1183 PANTHER:PTHR22870:SF7 EMBL:BC124691
IPI:IPI00490832 UniGene:Dr.91496 InParanoid:Q08BJ6 Uniprot:Q08BJ6
Length = 423
Score = 199 (75.1 bits), Expect = 5.9e-13, Sum P(2) = 5.9e-13
Identities = 77/256 (30%), Positives = 113/256 (44%)
Query: 214 ITKVAAGGRHTLILSDMXXXXXXXXXXXXXXXXXSRIKMVPTPHLIPCLEHAASGKDRPL 273
+T VAAG RH L S K + P +P H +S K+ P
Sbjct: 177 VTSVAAGLRHAL------ASTASGCVYQWGTGLSSHAKRMLNPQPVP--SHLSS-KE-PC 226
Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPS 333
LV G A + K IA G H A +T G L +G +GQ GS L +
Sbjct: 227 LV-------PGFAHVTTQKVIA-GSAHCACLTVNGELFLWGSNKHGQLISGSLFLPLPVA 278
Query: 334 Y-ASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGT---GVDQAENVPKLLET 389
S L D +V + +G H V + GRV+ +G + +GQLG +++ L+ +
Sbjct: 279 LDRSMLQDERVSDVHSGWTHLVAQTESGRVFTWGRSNYGQLGQTNHSMEKQSCDEHLVRS 338
Query: 390 PILESKR---AKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHG 445
P+ E K A +SCG+ H+ + G+V SWGWN++G G G D P +P +
Sbjct: 339 PV-EVKALFGATQISCGSEHNLAVV-GGRVFSWGWNEHGMCGDGSLQDITQPQPIPALAD 396
Query: 446 FLPRNIACGWWHTLLL 461
+ I CG H++ L
Sbjct: 397 AVALLIGCGAGHSMAL 412
Score = 180 (68.4 bits), Expect = 6.4e-11, P = 6.4e-11
Identities = 51/152 (33%), Positives = 70/152 (46%)
Query: 310 LLTFGWGLYGQCGHGSTNDQLRPSYASS-LMDIQVEQIAAGLWHTVCISVEGRVYVFGGN 368
L T+G YGQ G G+ DQ P S L + Q+ + G H+ IS G + V G N
Sbjct: 39 LYTWGANSYGQLGQGNAEDQAEPRRVESGLQEEQIRAVTGGGGHSALISDSGELLVCGQN 98
Query: 369 QFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLG 428
GQLG G + P+ R + VSCG + +LT DG VL+ G N +GQLG
Sbjct: 99 HKGQLGLG--HTLEIMTFQTCPLPGFGRVQQVSCGWDFTIILTGDGLVLACGSNAFGQLG 156
Query: 429 LGDSIDRNIPSLVPIHGFLP-RNIACGWWHTL 459
+ + L+ P ++A G H L
Sbjct: 157 VSAEKTHSAEPLLLKSFHEPVTSVAAGLRHAL 188
Score = 174 (66.3 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 40/110 (36%), Positives = 68/110 (61%)
Query: 355 CISVEGRVYVFGGNQFGQLGTG--VDQAENVPKLLETPILESKRAKVVSCGARHSAVLTE 412
C+S+ +Y +G N +GQLG G DQAE P+ +E+ L+ ++ + V+ G HSA++++
Sbjct: 35 CVSL---LYTWGANSYGQLGQGNAEDQAE--PRRVESG-LQEEQIRAVTGGGGHSALISD 88
Query: 413 DGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGF-LPRNIACGWWHTLLL 461
G++L G N GQLGLG +++ P+ GF + ++CGW T++L
Sbjct: 89 SGELLVCGQNHKGQLGLGHTLEIMTFQTCPLPGFGRVQQVSCGWDFTIIL 138
Score = 164 (62.8 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 48/156 (30%), Positives = 72/156 (46%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDI-QVEQIAAG 349
++ + GG HSA+++D+G LL G GQ G G T + + L +V+Q++ G
Sbjct: 73 IRAVTGGGGHSALISDSGELLVCGQNHKGQLGLGHTLE-IMTFQTCPLPGFGRVQQVSCG 131
Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
T+ ++ +G V G N FGQLG ++ + LL E + V+ G RH+
Sbjct: 132 WDFTIILTGDGLVLACGSNAFGQLGVSAEKTHSAEPLLLKSFHEPVTS--VAAGLRHALA 189
Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNI-PSLVPIH 444
T G V WG GL R + P VP H
Sbjct: 190 STASGCVYQWG------TGLSSHAKRMLNPQPVPSH 219
Score = 145 (56.1 bits), Expect = 9.6e-07, Sum P(2) = 9.6e-07
Identities = 52/188 (27%), Positives = 84/188 (44%)
Query: 287 GRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG-HGSTNDQLRPSYASSLMDIQVEQ 345
G V++++CG + ++T G +L G +GQ G P S + V
Sbjct: 121 GFGRVQQVSCGWDFTIILTGDGLVLACGSNAFGQLGVSAEKTHSAEPLLLKSFHE-PVTS 179
Query: 346 IAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET--PILESKRAKV---- 399
+AAGL H + + G VY +G ++ + VP L + P L A V
Sbjct: 180 VAAGLRHALASTASGCVYQWGTGLSSHAKRMLNP-QPVPSHLSSKEPCLVPGFAHVTTQK 238
Query: 400 VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP---IHGFLPRNIACGWW 456
V G+ H A LT +G++ WG NK+GQL + S+ +P + + ++ GW
Sbjct: 239 VIAGSAHCACLTVNGELFLWGSNKHGQL-ISGSLFLPLPVALDRSMLQDERVSDVHSGWT 297
Query: 457 HTLLLAET 464
H L+A+T
Sbjct: 298 H--LVAQT 303
Score = 39 (18.8 bits), Expect = 5.9e-13, Sum P(2) = 5.9e-13
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 213 KITKVAAGGRHTLILSD 229
+I V GG H+ ++SD
Sbjct: 72 QIRAVTGGGGHSALISD 88
>TAIR|locus:2144291 [details] [associations]
symbol:AT5G11580 "AT5G11580" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008536 "Ran GTPase binding" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 HSSP:P18754 EMBL:AY058861 EMBL:AY079040
IPI:IPI00537184 RefSeq:NP_568250.1 UniGene:At.5137 UniGene:At.75215
ProteinModelPortal:Q93Z10 SMR:Q93Z10 PRIDE:Q93Z10
EnsemblPlants:AT5G11580.1 GeneID:831030 KEGG:ath:AT5G11580
TAIR:At5g11580 InParanoid:Q93Z10 OMA:WTFGLGD PhylomeDB:Q93Z10
ProtClustDB:CLSN2689608 Genevestigator:Q93Z10 Uniprot:Q93Z10
Length = 553
Score = 187 (70.9 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 42/103 (40%), Positives = 62/103 (60%)
Query: 342 QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI-LESKRAKVV 400
++ +AAG HT+ ++ +G VY +G FG+LGTG + E VP L+E P E R ++V
Sbjct: 17 KIISLAAGEAHTIALTGDGCVYSWGRGMFGRLGTGKESDELVPVLVEFPNQAEGDRIRIV 76
Query: 401 --SCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
+ GA HS +++DG V WG+N YGQLG D + P L+
Sbjct: 77 GVAAGAYHSLAVSDDGSVWCWGYNIYGQLGF-DGENSLAPCLI 118
Score = 177 (67.4 bits), Expect = 6.3e-13, Sum P(2) = 6.3e-13
Identities = 56/172 (32%), Positives = 85/172 (49%)
Query: 285 KAGRSYVKEIACGGRHSAVVT-----DAGALL--TFGWGLYGQCGHGSTNDQLRPSYASS 337
K+G + V +IACG H+A++T G + TFG+G GQ GH S P S
Sbjct: 260 KSGLT-VYDIACGAHHTALLTYRKETPKGPSICWTFGFGENGQLGHRSNKSSSLPEPVSD 318
Query: 338 LMD-IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE------NVPKLLETP 390
L + + + GL+HT +S EG V+ +G + L V+ E +VP+ +
Sbjct: 319 LPEHAYLVSVDCGLFHTSVVSSEGYVWSWGMERGLGLCPDVNFTEVEAGDDSVPRKISGG 378
Query: 391 ILESKRAKVVSCGARHSAVLTEDGQVL-SWGWNKYGQLGLGDSIDRNIPSLV 441
+ VSCGA H+ ++ + G L SWG + G LG G+ D +P+LV
Sbjct: 379 SSRFRDPVQVSCGAAHTVLVVDGGYKLWSWGRGRNGVLGTGNVSDCYVPTLV 430
Score = 128 (50.1 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 49/194 (25%), Positives = 80/194 (41%)
Query: 272 PLLVRQGSVNSSGKAGRSYVKE-IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL 330
P+L G G +V + G H D L ++G +GQ G G +
Sbjct: 190 PILDFHGRTVLKVACGDEHVVALVGPGDIHKDNSYDVSVLYSWGNNHHGQLGLGDGESRA 249
Query: 331 RPSYASSLMD---IQVEQIAAGLWHTVCISVEGRV-------YVFGGNQFGQLGTGVDQA 380
RP + + V IA G HT ++ + FG + GQLG +++
Sbjct: 250 RPQTVETFNQKSGLTVYDIACGAHHTALLTYRKETPKGPSICWTFGFGENGQLGHRSNKS 309
Query: 381 ENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSL 440
++P+ + + + E V CG H++V++ +G V SWG + GLG D N +
Sbjct: 310 SSLPEPV-SDLPEHAYLVSVDCGLFHTSVVSSEGYVWSWGMER----GLGLCPDVNFTEV 364
Query: 441 VPIHGFLPRNIACG 454
+PR I+ G
Sbjct: 365 EAGDDSVPRKISGG 378
Score = 128 (50.1 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 27/86 (31%), Positives = 51/86 (59%)
Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP---SYASSLMD--IQVEQIAA 348
+A G H+ +T G + ++G G++G+ G G +D+L P + + I++ +AA
Sbjct: 21 LAAGEAHTIALTGDGCVYSWGRGMFGRLGTGKESDELVPVLVEFPNQAEGDRIRIVGVAA 80
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLG 374
G +H++ +S +G V+ +G N +GQLG
Sbjct: 81 GAYHSLAVSDDGSVWCWGYNIYGQLG 106
Score = 119 (46.9 bits), Expect = 0.00058, P = 0.00058
Identities = 76/308 (24%), Positives = 124/308 (40%)
Query: 194 SGDEFFTLSPCLVTL-NPG----VKITKVAAGGRHTLILSDMXXXXXXXXXXXXXXXXXS 248
+G E L P LV N ++I VAAG H+L +SD
Sbjct: 50 TGKESDELVPVLVEFPNQAEGDRIRIVGVAAGAYHSLAVSD------DGSVWCWGYNIYG 103
Query: 249 RIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVK--EIACGGRHSAVVTD 306
++ L PCL ++ S+N SG+ S +K + G S + +
Sbjct: 104 QLGFDGENSLAPCLIKNLFERE----TSSSSLNDSGREVGSDLKVCTVKAGSMMSLAIDN 159
Query: 307 AGALLTFGWGLYGQCGHGSTNDQLRPSYAS-----SLMDIQ---VEQIAAGLWHTVCISV 358
G L W ++G + R S+ S ++D V ++A G H V +
Sbjct: 160 VGGL----W-MWGNVPPQDSEPDPRLSFTSIPIPFPILDFHGRTVLKVACGDEHVVALVG 214
Query: 359 EGRV-----------YVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKV-VSCGARH 406
G + Y +G N GQLG G ++ P+ +ET +S ++CGA H
Sbjct: 215 PGDIHKDNSYDVSVLYSWGNNHHGQLGLGDGESRARPQTVETFNQKSGLTVYDIACGAHH 274
Query: 407 SAVLT-----EDGQVLSW--GWNKYGQLGLGDSIDRNIPSLVPIHGFLPRN-----IACG 454
+A+LT G + W G+ + GQLG + ++P P+ LP + + CG
Sbjct: 275 TALLTYRKETPKGPSICWTFGFGENGQLGHRSNKSSSLPE--PVSD-LPEHAYLVSVDCG 331
Query: 455 WWHTLLLA 462
+HT +++
Sbjct: 332 LFHTSVVS 339
Score = 99 (39.9 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 40/143 (27%), Positives = 66/143 (46%)
Query: 341 IQVEQIAAGLWHTVCISVEGRV-------YVFGGNQFGQLGTGVDQAENVPKLLETPILE 393
+ V IA G HT ++ + FG + GQLG +++ ++P+ + + + E
Sbjct: 263 LTVYDIACGAHHTALLTYRKETPKGPSICWTFGFGENGQLGHRSNKSSSLPEPV-SDLPE 321
Query: 394 SKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSL------VP--IHG 445
V CG H++V++ +G V SWG + GLG D N + VP I G
Sbjct: 322 HAYLVSVDCGLFHTSVVSSEGYVWSWGMER----GLGLCPDVNFTEVEAGDDSVPRKISG 377
Query: 446 ----FL-PRNIACGWWHTLLLAE 463
F P ++CG HT+L+ +
Sbjct: 378 GSSRFRDPVQVSCGAAHTVLVVD 400
Score = 68 (29.0 bits), Expect = 6.3e-13, Sum P(2) = 6.3e-13
Identities = 27/97 (27%), Positives = 43/97 (44%)
Query: 43 PARLCGGDSWKDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEP--- 97
P L D + + G A +A + G + +WG G+ L +GK + P
Sbjct: 6 PTLLISEDLSRKIISLAAGEAHTIALTGDGCVYSWGRGMF-GR--LGTGKESDELVPVLV 62
Query: 98 -FPLPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGW 130
FP E +V AAG H ++V++ G V+ WG+
Sbjct: 63 EFPNQAEGDRIRIVGVAAGAYHSLAVSDDGSVWCWGY 99
Score = 59 (25.8 bits), Expect = 5.4e-12, Sum P(2) = 5.4e-12
Identities = 18/70 (25%), Positives = 29/70 (41%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT--EASVVKAAAGWAHC 116
G +LA G L WG+ + P PFP+ +V+K A G H
Sbjct: 150 GSMMSLAIDNVGGLWMWGNVPPQDSEPDPRLSFTSIPIPFPILDFHGRTVLKVACGDEHV 209
Query: 117 VSVTEAGEVY 126
V++ G+++
Sbjct: 210 VALVGPGDIH 219
Score = 51 (23.0 bits), Expect = 3.6e-11, Sum P(2) = 3.6e-11
Identities = 19/57 (33%), Positives = 26/57 (45%)
Query: 24 MWGYLPGTSPEKS---PILSPIPARLCGGDSWKDV-CGGGCGFALATSESGKLITWG 76
M+G L GT E P+L P + GD + V G +LA S+ G + WG
Sbjct: 44 MFGRL-GTGKESDELVPVLVEFPNQ-AEGDRIRIVGVAAGAYHSLAVSDDGSVWCWG 98
Score = 48 (22.0 bits), Expect = 7.3e-11, Sum P(2) = 7.3e-11
Identities = 25/91 (27%), Positives = 36/91 (39%)
Query: 22 VYMWGYLPGTSPEKSPILS----PIPARLC---GGDSWKDVCGGGCGFALA--------- 65
++MWG +P E P LS PIP + G K CG AL
Sbjct: 163 LWMWGNVPPQDSEPDPRLSFTSIPIPFPILDFHGRTVLKVACGDEHVVALVGPGDIHKDN 222
Query: 66 TSESGKLITWGSADDEGQSYLTSGKHGETPE 96
+ + L +WG+ + GQ L G+ P+
Sbjct: 223 SYDVSVLYSWGN-NHHGQLGLGDGESRARPQ 252
Score = 40 (19.1 bits), Expect = 4.9e-10, Sum P(2) = 4.9e-10
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 202 SPCL-VTLNPGVKITKVAAGGRHTLILS 228
SP L ++ + KI +AAG HT+ L+
Sbjct: 5 SPTLLISEDLSRKIISLAAGEAHTIALT 32
>SGD|S000003065 [details] [associations]
symbol:SRM1 "Nucleotide exchange factor for Gsp1p"
species:4932 "Saccharomyces cerevisiae" [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0007067 "mitosis" evidence=IEA] [GO:0019236
"response to pheromone" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0004871 "signal transducer activity" evidence=IMP] [GO:0006810
"transport" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=ISM] [GO:0000054
"ribosomal subunit export from nucleus" evidence=IMP] [GO:0006407
"rRNA export from nucleus" evidence=IMP] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
SGD:S000003065 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016021
GO:GO:0051301 GO:GO:0007067 EMBL:BK006941 GO:GO:0000790
GO:GO:0004871 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 GO:GO:0019236 GO:GO:0000054
GeneTree:ENSGT00700000104160 GO:GO:0006407 OMA:PFEAIWA
HOGENOM:HOG000170207 OrthoDB:EOG466ZVF EMBL:M27013 EMBL:Z72619
PIR:A32320 RefSeq:NP_011418.1 PDB:3OF7 PDBsum:3OF7
ProteinModelPortal:P21827 SMR:P21827 DIP:DIP-2315N IntAct:P21827
MINT:MINT-561451 STRING:P21827 PaxDb:P21827 PeptideAtlas:P21827
EnsemblFungi:YGL097W GeneID:852782 KEGG:sce:YGL097W CYGD:YGL097w
EvolutionaryTrace:P21827 NextBio:972265 Genevestigator:P21827
GermOnline:YGL097W Uniprot:P21827
Length = 482
Score = 164 (62.8 bits), Expect = 6.4e-13, Sum P(2) = 6.4e-13
Identities = 48/185 (25%), Positives = 86/185 (46%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN---DQLR----PSYASSLMDIQV 343
V ++A S + G + + WG + +C G D+++ P + +
Sbjct: 167 VVQLAATDNMSCALFSNGEV--YAWGTF-RCNEGILGFYQDKIKIQKTPWKVPTFSKYNI 223
Query: 344 EQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCG 403
Q+A G H + + EG V+ +G Q QLG V + + K L+ + K ++ G
Sbjct: 224 VQLAPGKDHILFLDEEGMVFAWGNGQQNQLGRKVMERFRL-KTLDPRPFGLRHVKYIASG 282
Query: 404 ARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLP-----RNIACGWWHT 458
H LT+D +++SWG N++GQ G+ + ++ P LP R+IA G H+
Sbjct: 283 ENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDGALVTKPKRLALPDNVVIRSIAAGEHHS 342
Query: 459 LLLAE 463
L+L++
Sbjct: 343 LILSQ 347
Score = 142 (55.0 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 49/188 (26%), Positives = 82/188 (43%)
Query: 287 GRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQ----LRPSYASSLMDIQ 342
G +VK IA G H +T L+++G +GQCG + +P + ++
Sbjct: 272 GLRHVKYIASGENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDGALVTKPKRLALPDNVV 331
Query: 343 VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVD------------QAENVPKLLETP 390
+ IAAG H++ +S +G +Y G ++G D +A VP L T
Sbjct: 332 IRSIAAGEHHSLILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKARAVP--LPTK 389
Query: 391 ILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGD-SIDRNIPSLVPIHGFLPR 449
+ + K V+ G+ HS + ++G SWG+ + +GLG D +P+ +
Sbjct: 390 LNNVPKFKSVAAGSHHSVAVAQNGIAYSWGFGETYAVGLGPFEDDTEVPTRIKNTATQDH 449
Query: 450 NI---ACG 454
NI CG
Sbjct: 450 NIILVGCG 457
Score = 80 (33.2 bits), Expect = 6.4e-13, Sum P(2) = 6.4e-13
Identities = 26/93 (27%), Positives = 40/93 (43%)
Query: 72 LITWGSAD--DEGQSYLTSGKHGETPE--PFPLPT-EASVVKAAAGWAHCVSVTEAGEVY 126
+ WG+ + G L K + P PF LP EA ++ A G H +++ E V+
Sbjct: 48 IFCWGTGSMCELGLGPLAKNKEVKRPRLNPF-LPRDEAKIISFAVGGMHTLALDEESNVW 106
Query: 127 TWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSA 159
+WG C + RD +A KD S+
Sbjct: 107 SWG---CNDVGALGRDTSNAKEQLKDMDADDSS 136
Score = 71 (30.1 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 20/68 (29%), Positives = 34/68 (50%)
Query: 65 ATSESGKLITWGSAD-DEG--QSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTE 121
A +G++ WG+ +EG Y K +TP P ++ ++V+ A G H + + E
Sbjct: 179 ALFSNGEVYAWGTFRCNEGILGFYQDKIKIQKTPWKVPTFSKYNIVQLAPGKDHILFLDE 238
Query: 122 AGEVYTWG 129
G V+ WG
Sbjct: 239 EGMVFAWG 246
Score = 58 (25.5 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 21/60 (35%), Positives = 26/60 (43%)
Query: 77 SADDE-GQSYLTSGKHGETP-EPFPLPTEA-SVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
S+DDE G + P E FP E VV+ AA ++ GEVY WG C
Sbjct: 135 SSDDEDGDLNELESTPAKIPRESFPPLAEGHKVVQLAATDNMSCALFSNGEVYAWGTFRC 194
Score = 44 (20.5 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 9/17 (52%), Positives = 10/17 (58%)
Query: 213 KITKVAAGGRHTLILSD 229
KI A GG HTL L +
Sbjct: 85 KIISFAVGGMHTLALDE 101
>UNIPROTKB|F1NXI5 [details] [associations]
symbol:SERGEF "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IEA] [GO:0050709 "negative regulation of
protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005730 GO:GO:0045111
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
GeneTree:ENSGT00700000104160 PANTHER:PTHR22870:SF7
EMBL:AADN02030419 EMBL:AADN02030421 EMBL:AADN02030420
IPI:IPI00682810 Ensembl:ENSGALT00000010072 OMA:PIELDIT
Uniprot:F1NXI5
Length = 382
Score = 188 (71.2 bits), Expect = 6.1e-12, P = 6.1e-12
Identities = 50/131 (38%), Positives = 64/131 (48%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
+K IA GG HSAV+T AG L G GQ G T D L + ++L V+++A G
Sbjct: 32 IKSIAGGGGHSAVITGAGELFVCGHNKAGQLGLNHTEDVLCFTLCTALSGFCVQEVACGW 91
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKV-VSCGARHSAV 409
T+ + G V G N FGQLG V Q P L+ I K V ++ G RH+
Sbjct: 92 DFTIILGRAGLVLSCGSNAFGQLG--VPQISG-PCLIPQKIKSLKEKAVGIAAGLRHALA 148
Query: 410 LTEDGQVLSWG 420
TE G V WG
Sbjct: 149 ATESGLVFQWG 159
Score = 158 (60.7 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 37/97 (38%), Positives = 55/97 (56%)
Query: 366 GGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYG 425
G N +GQLG G + VP+LL+ + + K ++ G HSAV+T G++ G NK G
Sbjct: 1 GANSYGQLGLGHKEDVLVPQLLKDVSCKCQDIKSIAGGGGHSAVITGAGELFVCGHNKAG 60
Query: 426 QLGLGDSIDRNIPSL-VPIHGFLPRNIACGWWHTLLL 461
QLGL + D +L + GF + +ACGW T++L
Sbjct: 61 QLGLNHTEDVLCFTLCTALSGFCVQEVACGWDFTIIL 97
Score = 135 (52.6 bits), Expect = 6.2e-08, Sum P(2) = 6.2e-08
Identities = 46/164 (28%), Positives = 74/164 (45%)
Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCG--H-GSTNDQL----RPSYASSLMDIQVEQI 346
IA G RH+ T++G + +G G+ + H G T P + + Q+
Sbjct: 139 IAAGLRHALAATESGLVFQWGTGMASRAKRVHQGKTLPVFWAAKEPCEIKGNPGVLLCQV 198
Query: 347 AAGLWHT-VCISVEGRVYVFGGNQFGQL-GTGVDQAENVPKLLETPILESKRAKVVSCGA 404
+ + T + + EG +YV+G N+ GQL V E PK ++T ++ V G
Sbjct: 199 SLSAYLTSLSTAGEGHLYVWGSNKHGQLVSKEVFLVE--PKKIDTQFFSHEKIGAVWSGW 256
Query: 405 RHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLP 448
H TE G+V +WG YGQLG ++ ++ + FLP
Sbjct: 257 THLVAQTETGKVFTWGRADYGQLGRHAAV-YVADRVIKLDSFLP 299
Score = 130 (50.8 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 39/136 (28%), Positives = 64/136 (47%)
Query: 342 QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG--TGVDQAENVPKLLE-TPILESKRAK 398
++ + +G H V + G+V+ +G +GQLG V A+ V KL P A+
Sbjct: 248 KIGAVWSGWTHLVAQTETGKVFTWGRADYGQLGRHAAVYVADRVIKLDSFLPCCPQPEAE 307
Query: 399 V----------VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLP 448
++CG+ H+ + D LSWGWN++G G G + ++P V G+
Sbjct: 308 KNGNHTILLFQIACGSEHNLAVVGDC-CLSWGWNEHGMCGDGTEANVHVPKPVKALGYAK 366
Query: 449 RN-IACGWWHTLLLAE 463
+ I CG H+L L +
Sbjct: 367 QILIGCGAGHSLALCQ 382
Score = 97 (39.2 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 29/71 (40%), Positives = 38/71 (53%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA-SVVKAAA---GWAHCVS 118
+L+T+ G L WGS + GQ L S K EP + T+ S K A GW H V+
Sbjct: 206 SLSTAGEGHLYVWGS-NKHGQ--LVS-KEVFLVEPKKIDTQFFSHEKIGAVWSGWTHLVA 261
Query: 119 VTEAGEVYTWG 129
TE G+V+TWG
Sbjct: 262 QTETGKVFTWG 272
Score = 83 (34.3 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 21/65 (32%), Positives = 33/65 (50%)
Query: 293 EIACGGRHS-AVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLW 351
+IACG H+ AVV D L++GW +G CG G+ + P +L + I G
Sbjct: 318 QIACGSEHNLAVVGDC--CLSWGWNEHGMCGDGTEANVHVPKPVKALGYAKQILIGCGAG 375
Query: 352 HTVCI 356
H++ +
Sbjct: 376 HSLAL 380
Score = 63 (27.2 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 22/78 (28%), Positives = 32/78 (41%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLPTEASVVKAAAGW- 113
G ALA +ESG + WG+ + GK EP + V+
Sbjct: 142 GLRHALAATESGLVFQWGTGMASRAKRVHQGKTLPVFWAAKEPCEIKGNPGVLLCQVSLS 201
Query: 114 AHCVSVTEAGE--VYTWG 129
A+ S++ AGE +Y WG
Sbjct: 202 AYLTSLSTAGEGHLYVWG 219
Score = 60 (26.2 bits), Expect = 6.2e-08, Sum P(2) = 6.2e-08
Identities = 21/73 (28%), Positives = 35/73 (47%)
Query: 60 CG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT-EASVVKAAAGWAHC 116
CG F + +G +++ GS + GQ + G P + + + V AAG H
Sbjct: 89 CGWDFTIILGRAGLVLSCGS-NAFGQLGVPQIS-GPCLIPQKIKSLKEKAVGIAAGLRHA 146
Query: 117 VSVTEAGEVYTWG 129
++ TE+G V+ WG
Sbjct: 147 LAATESGLVFQWG 159
Score = 60 (26.2 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 26/86 (30%), Positives = 36/86 (41%)
Query: 47 CGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS- 105
C K + GGG G + + +G+L G + GQ L H E F L T S
Sbjct: 27 CKCQDIKSIAGGG-GHSAVITGAGELFVCGH-NKAGQLGLN---HTEDVLCFTLCTALSG 81
Query: 106 --VVKAAAGWAHCVSVTEAGEVYTWG 129
V + A GW + + AG V + G
Sbjct: 82 FCVQEVACGWDFTIILGRAGLVLSCG 107
Score = 39 (18.8 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 203 PCLVTLNPGVKITKVA 218
PC + NPGV + +V+
Sbjct: 184 PCEIKGNPGVLLCQVS 199
>ASPGD|ASPL0000064315 [details] [associations]
symbol:rcc1 species:162425 "Emericella nidulans"
[GO:0000790 "nuclear chromatin" evidence=IDA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0006406
"mRNA export from nucleus" evidence=IEA] [GO:0006407 "rRNA export
from nucleus" evidence=IEA] [GO:0000054 "ribosomal subunit export
from nucleus" evidence=IEA] [GO:0031291 "Ran protein signal
transduction" evidence=IEA] [GO:0042992 "negative regulation of
transcription factor import into nucleus" evidence=IEA] [GO:1901673
"regulation of spindle assembly involved in mitosis" evidence=IEA]
[GO:0060623 "regulation of chromosome condensation" evidence=IEA]
[GO:0007093 "mitotic cell cycle checkpoint" evidence=IEA]
[GO:0030071 "regulation of mitotic metaphase/anaphase transition"
evidence=IEA] [GO:0032888 "regulation of mitotic spindle
elongation" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 EMBL:BN001304
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AACD01000117 eggNOG:COG5184 OMA:PFEAIWA HOGENOM:HOG000170207
OrthoDB:EOG466ZVF RefSeq:XP_664582.1 ProteinModelPortal:Q5AXK2
STRING:Q5AXK2 EnsemblFungi:CADANIAT00000503 GeneID:2870170
KEGG:ani:AN6978.2 Uniprot:Q5AXK2
Length = 533
Score = 144 (55.7 bits), Expect = 4.9e-11, Sum P(2) = 4.9e-11
Identities = 47/194 (24%), Positives = 86/194 (44%)
Query: 279 SVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY----GQCGHGS-TNDQLRPS 333
++ SS + + E+A G S +TD G + +GWG + G G + T Q P
Sbjct: 221 AIPSSAFPHGTVIVEVAAGDSSSFALTDEGQV--YGWGTFRSNDGILGFDAKTKVQTTPK 278
Query: 334 YASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILE 393
L +++ + G H + ++ +G V +G Q QLG + + + L
Sbjct: 279 LLPDLK--KIKHLVCGDNHVLALNDKGAVLSWGSGQQNQLGRRIIERNKLNGLQPREFGL 336
Query: 394 SKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV-P--IHGFLPRN 450
K + GA HS + + G+V +WG N +G+ G+ ++ + ++V P + +N
Sbjct: 337 PKGIVHIGAGAFHSFAVHQSGKVFAWGLNSFGETGIRENAGDSEAAIVHPTVVDSLSKKN 396
Query: 451 IA--CGWWHTLLLA 462
+ CG H + A
Sbjct: 397 VTQICGGAHHSIAA 410
Score = 140 (54.3 bits), Expect = 6.3e-12, Sum P(3) = 6.3e-12
Identities = 44/166 (26%), Positives = 75/166 (45%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCG-HGSTNDQ----LRPSYASSLMDIQVEQ 345
+ I G HS V +G + +G +G+ G + D + P+ SL V Q
Sbjct: 340 IVHIGAGAFHSFAVHQSGKVFAWGLNSFGETGIRENAGDSEAAIVHPTVVDSLSKKNVTQ 399
Query: 346 IAAGLWHTVCISVEGRVYVFG---GNQFG-QLGTGVDQA-----ENVPKLLETPI-LESK 395
I G H++ + +G V+G G Q G ++ T D A + P++L P +
Sbjct: 400 ICGGAHHSIAATQDGECLVWGRLDGYQTGLKIDTLPDDAVIKDERDRPRILIEPTAVPGI 459
Query: 396 RAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLV 441
+AK V+ G+ HS + G+ SWG++ Q G G D + +++
Sbjct: 460 KAKAVAAGSDHSIAIDTSGRPWSWGFSATYQTGQGTQDDVEVATVI 505
Score = 101 (40.6 bits), Expect = 8.8e-06, Sum P(2) = 8.8e-06
Identities = 25/78 (32%), Positives = 39/78 (50%)
Query: 55 VCGGGCGFALATSESGKLITWGSADDE--GQSYLTSGK-HGETPEPFPLPTEASVVKAAA 111
VCG LA ++ G +++WGS G+ + K +G P F LP +V A
Sbjct: 290 VCGDN--HVLALNDKGAVLSWGSGQQNQLGRRIIERNKLNGLQPREFGLPK--GIVHIGA 345
Query: 112 GWAHCVSVTEAGEVYTWG 129
G H +V ++G+V+ WG
Sbjct: 346 GAFHSFAVHQSGKVFAWG 363
Score = 85 (35.0 bits), Expect = 6.3e-12, Sum P(3) = 6.3e-12
Identities = 21/62 (33%), Positives = 30/62 (48%)
Query: 97 PFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
P LP + VV+ A G HCV++T +V TWG + + RD G + KD +
Sbjct: 141 PHLLPDDVGVVQVAVGGMHCVALTHDNKVLTWGVND---QGALGRDTTWEGGY-KDMDNR 196
Query: 157 QS 158
S
Sbjct: 197 DS 198
Score = 80 (33.2 bits), Expect = 8.8e-06, Sum P(2) = 8.8e-06
Identities = 42/160 (26%), Positives = 62/160 (38%)
Query: 267 SGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWG-LYG-QCG-- 322
+G +V V+S K V +I G HS T G L WG L G Q G
Sbjct: 376 AGDSEAAIVHPTVVDSLSKKN---VTQICGGAHHSIAATQDGECLV--WGRLDGYQTGLK 430
Query: 323 ------HGSTNDQL-RPSYA---SSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQ 372
D+ RP +++ I+ + +AAG H++ I GR + +G + Q
Sbjct: 431 IDTLPDDAVIKDERDRPRILIEPTAVPGIKAKAVAAGSDHSIAIDTSGRPWSWGFSATYQ 490
Query: 373 LGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTE 412
G G V ++E + K G + S V TE
Sbjct: 491 TGQGTQDDVEVATVIENTAVRGKSLNWAGGGGQFS-VFTE 529
Score = 65 (27.9 bits), Expect = 5.3e-09, Sum P(3) = 5.3e-09
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 91 HGETPEPFP---LPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
H TP P P +V+ AAG + ++T+ G+VY WG
Sbjct: 215 HECTPTAIPSSAFPHGTVIVEVAAGDSSSFALTDEGQVYGWG 256
Score = 52 (23.4 bits), Expect = 6.3e-12, Sum P(3) = 6.3e-12
Identities = 28/111 (25%), Positives = 46/111 (41%)
Query: 188 ESENPASGDEFFTLSP--CLVTLNP------GVKITKVAAGGRHTLILSD--MXXXXXXX 237
+S++ + D+ L+P C T P G I +VAAG + L+D
Sbjct: 199 DSDSDSDSDDNPDLNPHECTPTAIPSSAFPHGTVIVEVAAGDSSSFALTDEGQVYGWGTF 258
Query: 238 XXXXXXXXXXSRIKMVPTPHLIPCLE---HAASGKDRPLLVR-QGSVNSSG 284
++ K+ TP L+P L+ H G + L + +G+V S G
Sbjct: 259 RSNDGILGFDAKTKVQTTPKLLPDLKKIKHLVCGDNHVLALNDKGAVLSWG 309
Score = 43 (20.2 bits), Expect = 5.3e-09, Sum P(3) = 5.3e-09
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 55 VCGGGCGFALATSESGKLITWGSADDEG 82
V GG +A + K++TWG +D+G
Sbjct: 153 VAVGGM-HCVALTHDNKVLTWG-VNDQG 178
Score = 39 (18.8 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILS 228
L+P L+ + GV +VA GG H + L+
Sbjct: 139 LNPHLLPDDVGV--VQVAVGGMHCVALT 164
>UNIPROTKB|J9NZT9 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 EMBL:AAEX03016754 EMBL:AAEX03016753
Ensembl:ENSCAFT00000045241 Uniprot:J9NZT9
Length = 865
Score = 189 (71.6 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 39/84 (46%), Positives = 50/84 (59%)
Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
I+CG H+AV+T +G + TFG G GQ GH S ND++ P LM +V QIA G HT
Sbjct: 62 ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHT 121
Query: 354 VC-ISVEGRVYVFGGNQFGQLGTG 376
+ + G +Y FG GQLGTG
Sbjct: 122 LAFVPSSGLIYAFGCGAKGQLGTG 145
Score = 160 (61.4 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 42/138 (30%), Positives = 66/138 (47%)
Query: 313 FGWGLY--GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQF 370
FGWG+ GQ G D+ P + L +V I+ G HT ++ G V+ FG
Sbjct: 27 FGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSC 86
Query: 371 GQLG-TGVDQAENVPKLLETPILESKRAKVVSCGARHS-AVLTEDGQVLSWGWNKYGQLG 428
GQLG ++ N ++LE L ++CG +H+ A + G + ++G GQLG
Sbjct: 87 GQLGHDSMNDEVNPRRVLE---LMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAKGQLG 143
Query: 429 LGDSIDRNIPSLVPIHGF 446
G + + PS P+ G+
Sbjct: 144 TGHTCNVKCPS--PVKGY 159
Score = 144 (55.7 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 38/103 (36%), Positives = 55/103 (53%)
Query: 359 EGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLS 418
EG V+ +G N GQLG ++ P +L +++ +SCG H+AVLT+ G V +
Sbjct: 23 EGAVFGWGMNNAGQLGLSDEEDRESP--CHVKLLRTQKVVYISCGEEHTAVLTKSGGVFT 80
Query: 419 WGWNKYGQLGLGDSIDRNI-PSLV-PIHGFLPRNIACGWWHTL 459
+G GQLG DS++ + P V + G IACG HTL
Sbjct: 81 FGAGSCGQLG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTL 122
>DICTYBASE|DDB_G0282633 [details] [associations]
symbol:DDB_G0282633 "putative guanine nucleotide
exchange factor (GEF)" species:44689 "Dictyostelium discoideum"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 dictyBase:DDB_G0282633
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AAFI02000047 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
RefSeq:XP_640165.2 ProteinModelPortal:Q54S74
EnsemblProtists:DDB0234270 GeneID:8623703 KEGG:ddi:DDB_G0282633
OMA:RLAYLCN ProtClustDB:CLSZ2501699 Uniprot:Q54S74
Length = 919
Score = 188 (71.2 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 52/176 (29%), Positives = 89/176 (50%)
Query: 297 GGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCI 356
G ++ ++TD GA+ + G YG+ GH D L P+ L + +++ IA G H++ +
Sbjct: 202 GQNYNLILTDTGAVYSSGLCSYGKTGHKKKRDVLIPTQILELSNKRIKSIACGTHHSLAM 261
Query: 357 SVEGRVYVFGGNQFGQLGTGVD-QAENVPKLLET--PILESKRAKVVSCGARHSAVLTED 413
G+VY +G G+LG G D P L+ ++ A ++ G +S +L +
Sbjct: 262 DDLGQVYSWGNGASGRLGLGNDFSIVPTPTLISVINRFGSNEIATAIAAGCDNSMILGSN 321
Query: 414 GQVLSWGWNKYGQLG-------LG-DSIDRNIPSLVPIHGFLPRNIACGWWHTLLL 461
G V S+G N + +LG LG S + IPS++ + ++IAC WH++ L
Sbjct: 322 GDVYSFGSNLHYKLGYKECDGALGFQSTPKKIPSILQM-----KSIACASWHSVFL 372
Score = 170 (64.9 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 52/191 (27%), Positives = 93/191 (48%)
Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGH----GSTNDQLRPSYASSLMDIQVEQIAAG 349
IA G +S ++ G + +FG L+ + G+ G+ Q P S++ Q++ IA
Sbjct: 308 IAAGCDNSMILGSNGDVYSFGSNLHYKLGYKECDGALGFQSTPKKIPSIL--QMKSIACA 365
Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV-PKLLETP-------ILESKRAKVVS 401
WH+V + ++GRVY G + G+LG + + P+ + + + + K ++
Sbjct: 366 SWHSVFLDLKGRVYTCGSSTNGRLGRAISSYSSFYPERVSITNSKTNGTLPQEEVIKQIA 425
Query: 402 CGARHSAVLTEDGQVLSWGWNKYGQLGL----GDSIDRNIPSLVP-IHGFLPRNIACGWW 456
CG + VL+E G + SWG N QLGL G S + P LV ++ + + A G
Sbjct: 426 CGTNFTTVLSESGSLYSWGVNTKSQLGLINLVGISEYYSQPKLVTALNPYTIHSFAVGDQ 485
Query: 457 HTLLLAETTQI 467
H + L++ ++
Sbjct: 486 HVVALSDQGEV 496
Score = 149 (57.5 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 64/216 (29%), Positives = 100/216 (46%)
Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTND 328
K R +L+ + S K +K IACG HS + D G + ++G G G+ G G+
Sbjct: 230 KKRDVLIPTQILELSNKR----IKSIACGTHHSLAMDDLGQVYSWGNGASGRLGLGNDFS 285
Query: 329 QL-RPSYASSLMDIQVEQIA----AGLWHTVCISVEGRVYVFGGNQFGQLG-TGVDQA-- 380
+ P+ S + +IA AG +++ + G VY FG N +LG D A
Sbjct: 286 IVPTPTLISVINRFGSNEIATAIAAGCDNSMILGSNGDVYSFGSNLHYKLGYKECDGALG 345
Query: 381 -ENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG-DSIDRNIP 438
++ PK + + IL+ K ++C + HS L G+V + G + G+LG S P
Sbjct: 346 FQSTPKKIPS-ILQMKS---IACASWHSVFLDLKGRVYTCGSSTNGRLGRAISSYSSFYP 401
Query: 439 SLVPI-----HGFLP-----RNIACGWWHTLLLAET 464
V I +G LP + IACG T +L+E+
Sbjct: 402 ERVSITNSKTNGTLPQEEVIKQIACGTNFTTVLSES 437
Score = 119 (46.9 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 45/161 (27%), Positives = 69/161 (42%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHG-STNDQLRPSYAS--------SLMDI 341
+K IAC HS + G + T G G+ G S+ P S +L
Sbjct: 359 MKSIACASWHSVFLDLKGRVYTCGSSTNGRLGRAISSYSSFYPERVSITNSKTNGTLPQE 418
Query: 342 QV-EQIAAGLWHTVCISVEGRVYVFGGNQFGQLG----TGVDQAENVPKLLETPILESKR 396
+V +QIA G T +S G +Y +G N QLG G+ + + PKL+ L
Sbjct: 419 EVIKQIACGTNFTTVLSESGSLYSWGVNTKSQLGLINLVGISEYYSQPKLVTA--LNPYT 476
Query: 397 AKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI 437
+ G +H L++ G+V +G N Q G G+ ++ I
Sbjct: 477 IHSFAVGDQHVVALSDQGEVFCYGDNSTLQCGFGEVLNFEI 517
Score = 114 (45.2 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 39/139 (28%), Positives = 67/139 (48%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGH----GSTNDQLRPSYASSLMDIQVEQI 346
+K+IACG + V++++G+L ++G Q G G + +P ++L +
Sbjct: 421 IKQIACGTNFTTVLSESGSLYSWGVNTKSQLGLINLVGISEYYSQPKLVTALNPYTIHSF 480
Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTG-VDQAE-NVPKL-LET-----PILESKRAK 398
A G H V +S +G V+ +G N Q G G V E N+ K+ +ET PI+
Sbjct: 481 AVGDQHVVALSDQGEVFCYGDNSTLQCGFGEVLNFEINLTKVKIETTSSDAPIIGGGGVF 540
Query: 399 VVSCGARHSAV-LTEDGQV 416
VS G ++ + L+ D +
Sbjct: 541 KVSAGGSNTMISLSSDHNI 559
Score = 55 (24.4 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 13/57 (22%), Positives = 22/57 (38%)
Query: 213 KITKVAAGGRHTLILSDMXXXXXXXXXXXXXXXXXSRIKMVPTPHLIPCLEHAASGK 269
+I +A G H+L + D+ + +VPTP LI + S +
Sbjct: 247 RIKSIACGTHHSLAMDDLGQVYSWGNGASGRLGLGNDFSIVPTPTLISVINRFGSNE 303
Score = 53 (23.7 bits), Expect = 6.0e-10, Sum P(2) = 6.0e-10
Identities = 8/20 (40%), Positives = 14/20 (70%)
Query: 110 AAGWAHCVSVTEAGEVYTWG 129
A G H +++ + G+VY+WG
Sbjct: 252 ACGTHHSLAMDDLGQVYSWG 271
Score = 42 (19.8 bits), Expect = 8.2e-09, Sum P(2) = 8.2e-09
Identities = 22/82 (26%), Positives = 36/82 (43%)
Query: 60 CG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA-------- 109
CG +LA + G++ +WG+ G+ L G P PT SV+
Sbjct: 253 CGTHHSLAMDDLGQVYSWGNGAS-GRLGL-----GNDFSIVPTPTLISVINRFGSNEIAT 306
Query: 110 --AAGWAHCVSVTEAGEVYTWG 129
AAG + + + G+VY++G
Sbjct: 307 AIAAGCDNSMILGSNGDVYSFG 328
>UNIPROTKB|Q83CB0 [details] [associations]
symbol:CBU_1217 "Hypothetical membrane spanning protein"
species:227377 "Coxiella burnetii RSA 493" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE016828
GenomeReviews:AE016828_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 OMA:GYIYAWG
RefSeq:NP_820212.1 ProteinModelPortal:Q83CB0 GeneID:1209121
KEGG:cbu:CBU_1217 PATRIC:17931169 HOGENOM:HOG000029001
ProtClustDB:CLSK914618 BioCyc:CBUR227377:GJ7S-1203-MONOMER
Uniprot:Q83CB0
Length = 497
Score = 174 (66.3 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 50/166 (30%), Positives = 82/166 (49%)
Query: 299 RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPS-----YASSLMDI--QVEQIAAGLW 351
RH+ ++T+ G + +G+ + G+ G G ++ +P+ + L++ ++ Q+
Sbjct: 188 RHAFILTEEGGIYGWGFNISGELGLGDRFERSQPTELPQNFFPYLLERGDRIVQLNFADR 247
Query: 352 HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAK----VVSCGARHS 407
+ V + +G VYV+G N G+LG +Q P L V G RH+
Sbjct: 248 YLVARTAQGHVYVWGFNYRGRLGLDDEQDRLHPVELSWDFFPEWHPDDYIIQVVVGDRHT 307
Query: 408 AVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIH---GFLPRN 450
LT+ G + +WG N YGQLG D DRN P+L+P + G L RN
Sbjct: 308 LALTQLGYIYAWGKNSYGQLGFRDQQDRNRPALLPWNRFPGLLERN 353
Score = 160 (61.4 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 50/172 (29%), Positives = 79/172 (45%)
Query: 290 YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYAS-----SLM---DI 341
Y+ ++ G RH+ +T G + +G YGQ G D+ RP+ L+ D
Sbjct: 296 YIIQVVVGDRHTLALTQLGYIYAWGKNSYGQLGFRDQQDRNRPALLPWNRFPGLLERNDR 355
Query: 342 QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET---PILESKRAK 398
+E IA G ++ + +G +Y++G L G + + P LL P L +
Sbjct: 356 IIELIAGGA-RSLARTEQGFIYIWGARWL--LVRGDPEFRHHPMLLTENYFPGLRRRGDH 412
Query: 399 VVS--CGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLP 448
+V G H+ TE G + +WG N YGQLGLGD + P+L+ + P
Sbjct: 413 LVELIAGPDHTLARTEQGYIYAWGRNYYGQLGLGDRRIQRQPALLDPNAIPP 464
Score = 53 (23.7 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 8/26 (30%), Positives = 16/26 (61%)
Query: 105 SVVKAAAGWAHCVSVTEAGEVYTWGW 130
++V+ + + H +TE G +Y WG+
Sbjct: 179 TIVQLLSDYRHAFILTEEGGIYGWGF 204
Score = 49 (22.3 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 20/75 (26%), Positives = 32/75 (42%)
Query: 63 ALATSESGKLITWG-SADDE---GQSYLTSGKHGETPE---PFPLPTEASVVKAAAGWAH 115
A +E G + WG + E G + S + E P+ P+ L +V+ +
Sbjct: 190 AFILTEEGGIYGWGFNISGELGLGDRFERS-QPTELPQNFFPYLLERGDRIVQLNFADRY 248
Query: 116 CVSVTEAGEVYTWGW 130
V+ T G VY WG+
Sbjct: 249 LVARTAQGHVYVWGF 263
>TIGR_CMR|CBU_1217 [details] [associations]
symbol:CBU_1217 "hypothetical protein" species:227377
"Coxiella burnetii RSA 493" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] INTERPRO:IPR000408
Pfam:PF00415 EMBL:AE016828 GenomeReviews:AE016828_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 OMA:GYIYAWG RefSeq:NP_820212.1
ProteinModelPortal:Q83CB0 GeneID:1209121 KEGG:cbu:CBU_1217
PATRIC:17931169 HOGENOM:HOG000029001 ProtClustDB:CLSK914618
BioCyc:CBUR227377:GJ7S-1203-MONOMER Uniprot:Q83CB0
Length = 497
Score = 174 (66.3 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 50/166 (30%), Positives = 82/166 (49%)
Query: 299 RHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPS-----YASSLMDI--QVEQIAAGLW 351
RH+ ++T+ G + +G+ + G+ G G ++ +P+ + L++ ++ Q+
Sbjct: 188 RHAFILTEEGGIYGWGFNISGELGLGDRFERSQPTELPQNFFPYLLERGDRIVQLNFADR 247
Query: 352 HTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAK----VVSCGARHS 407
+ V + +G VYV+G N G+LG +Q P L V G RH+
Sbjct: 248 YLVARTAQGHVYVWGFNYRGRLGLDDEQDRLHPVELSWDFFPEWHPDDYIIQVVVGDRHT 307
Query: 408 AVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIH---GFLPRN 450
LT+ G + +WG N YGQLG D DRN P+L+P + G L RN
Sbjct: 308 LALTQLGYIYAWGKNSYGQLGFRDQQDRNRPALLPWNRFPGLLERN 353
Score = 160 (61.4 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 50/172 (29%), Positives = 79/172 (45%)
Query: 290 YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYAS-----SLM---DI 341
Y+ ++ G RH+ +T G + +G YGQ G D+ RP+ L+ D
Sbjct: 296 YIIQVVVGDRHTLALTQLGYIYAWGKNSYGQLGFRDQQDRNRPALLPWNRFPGLLERNDR 355
Query: 342 QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET---PILESKRAK 398
+E IA G ++ + +G +Y++G L G + + P LL P L +
Sbjct: 356 IIELIAGGA-RSLARTEQGFIYIWGARWL--LVRGDPEFRHHPMLLTENYFPGLRRRGDH 412
Query: 399 VVS--CGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLP 448
+V G H+ TE G + +WG N YGQLGLGD + P+L+ + P
Sbjct: 413 LVELIAGPDHTLARTEQGYIYAWGRNYYGQLGLGDRRIQRQPALLDPNAIPP 464
Score = 53 (23.7 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 8/26 (30%), Positives = 16/26 (61%)
Query: 105 SVVKAAAGWAHCVSVTEAGEVYTWGW 130
++V+ + + H +TE G +Y WG+
Sbjct: 179 TIVQLLSDYRHAFILTEEGGIYGWGF 204
Score = 49 (22.3 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 20/75 (26%), Positives = 32/75 (42%)
Query: 63 ALATSESGKLITWG-SADDE---GQSYLTSGKHGETPE---PFPLPTEASVVKAAAGWAH 115
A +E G + WG + E G + S + E P+ P+ L +V+ +
Sbjct: 190 AFILTEEGGIYGWGFNISGELGLGDRFERS-QPTELPQNFFPYLLERGDRIVQLNFADRY 248
Query: 116 CVSVTEAGEVYTWGW 130
V+ T G VY WG+
Sbjct: 249 LVARTAQGHVYVWGF 263
>DICTYBASE|DDB_G0282575 [details] [associations]
symbol:DDB_G0282575 "putative GTPase activating
protein (GAP)" species:44689 "Dictyostelium discoideum" [GO:0032851
"positive regulation of Rab GTPase activity" evidence=IEA]
[GO:0032313 "regulation of Rab GTPase activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005097 "Rab GTPase
activator activity" evidence=IEA] InterPro:IPR000195 Pfam:PF00566
PROSITE:PS50086 SMART:SM00164 dictyBase:DDB_G0282575
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AAFI02000047 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5210
GO:GO:0005097 GO:GO:0032851 SUPFAM:SSF47923 RefSeq:XP_640136.1
ProteinModelPortal:Q54SA3 EnsemblProtists:DDB0235329 GeneID:8623673
KEGG:ddi:DDB_G0282575 InParanoid:Q54SA3 OMA:NIVFRIW Uniprot:Q54SA3
Length = 1194
Score = 136 (52.9 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 48/165 (29%), Positives = 77/165 (46%)
Query: 310 LLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQ 369
+L+FG G N++L+ + I++ QI+ G H + +S + VY +G +
Sbjct: 339 VLSFGGSNDNNFLGGVINNELQ-MMTDQMNSIKIIQISCGSNHILALSDQYHVYSWGSAE 397
Query: 370 FGQLGTGVDQA--ENVPKLLETP----ILESKRAKV--VSCGARHSAVLTEDGQVLSWGW 421
G+LG G D + P+ + +P L+ K V VS G H LT D +L+WG
Sbjct: 398 HGKLGHGEDYSFVSQNPRWINSPKKIKSLQEKGVTVISVSSGYSHCMALTLDSGILTWGK 457
Query: 422 NKYGQLGLGDSIDRNIPSLVPIHGFLPRN-----IACGWWHTLLL 461
GQLG G D I S I + +N I CG++++ +
Sbjct: 458 GSDGQLGTGFRHD--IWSPFEIKRVIDKNEKIVQICCGYFNSFFI 500
Score = 133 (51.9 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 35/113 (30%), Positives = 53/113 (46%)
Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGG-NQFGQLGTG-----VDQAENV 383
+ P L + Q++ G HT+ +S G +Y +G N GQLG G + +N+
Sbjct: 27 IEPIEVPELNKKNIVQLSCGSTHTLVLSDSGDLYSWGSSNSSGQLGHGDSKNQYGKPKNI 86
Query: 384 PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRN 436
K L VS G + VLT+ G + +WG N GQL LG +++N
Sbjct: 87 KKFSLIKALSGDSVIQVSTGLDFTFVLTDQGSIYNWGSNIEGQLALGQPVNKN 139
Score = 125 (49.1 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 40/158 (25%), Positives = 77/158 (48%)
Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCGHG------STNDQL--RPSYASSLMD--IQ 342
+I+CG H ++D + ++G +G+ GHG S N + P SL + +
Sbjct: 373 QISCGSNHILALSDQYHVYSWGSAEHGKLGHGEDYSFVSQNPRWINSPKKIKSLQEKGVT 432
Query: 343 VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSC 402
V +++G H + ++++ + +G GQLGTG P ++ I ++++ + C
Sbjct: 433 VISVSSGYSHCMALTLDSGILTWGKGSDGQLGTGFRHDIWSPFEIKRVIDKNEKIVQICC 492
Query: 403 GARHSAVLT-EDGQVLSWGWNKYGQLGLGDSIDRNIPS 439
G +S +T E ++ +GW+ + LG S D IP+
Sbjct: 493 GYFNSFFITLEKRELYQFGWS----IPLGKSDDILIPT 526
Score = 121 (47.7 bits), Expect = 4.0e-11, Sum P(2) = 4.0e-11
Identities = 26/82 (31%), Positives = 46/82 (56%)
Query: 394 SKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG---DSIDR----NIPSLVP-IHG 445
S R K +S G H+ +L E+G+ LS G ++GQLG+ SID+ N P+++P +
Sbjct: 563 SNRIKQISSGYSHTLILNENGECLSIGQGEFGQLGIPLDHSSIDKDSFVNYPTVIPALLP 622
Query: 446 FLPRNIACGWWHTLLLAETTQI 467
+ ++ CG WH++ + +
Sbjct: 623 YFVESVQCGRWHSVAIVSNRNL 644
Score = 119 (46.9 bits), Expect = 4.0e-11, Sum P(2) = 4.0e-11
Identities = 31/96 (32%), Positives = 51/96 (53%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLY---GQCGHGSTNDQL-RP------SYASSLMD 340
+ +++CG H+ V++D+G L + WG GQ GHG + +Q +P S +L
Sbjct: 40 IVQLSCGSTHTLVLSDSGDL--YSWGSSNSSGQLGHGDSKNQYGKPKNIKKFSLIKALSG 97
Query: 341 IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG 376
V Q++ GL T ++ +G +Y +G N GQL G
Sbjct: 98 DSVIQVSTGLDFTFVLTDQGSIYNWGSNIEGQLALG 133
Score = 102 (41.0 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 50/177 (28%), Positives = 82/177 (46%)
Query: 291 VKEIACGGRHSAVVT-DAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDI--QVEQIA 347
V ++ G H +T D+G +LT+G G GQ G G +D P ++D ++ QI
Sbjct: 433 VISVSSGYSHCMALTLDSG-ILTWGKGSDGQLGTGFRHDIWSPFEIKRVIDKNEKIVQIC 491
Query: 348 AGLWHTVCISVEGR-VYVFGGN-QFGQ---------------LGTGVDQAENVPKLLETP 390
G +++ I++E R +Y FG + G+ L + EN K +
Sbjct: 492 CGYFNSFFITLEKRELYQFGWSIPLGKSDDILIPTKFIWLNPLKNKNNNNENEDKKDDDD 551
Query: 391 ILE--------SKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG---DSIDRN 436
+ S R K +S G H+ +L E+G+ LS G ++GQLG+ SID++
Sbjct: 552 DNDDEDENNDNSNRIKQISSGYSHTLILNENGECLSIGQGEFGQLGIPLDHSSIDKD 608
Score = 94 (38.1 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 23/73 (31%), Positives = 38/73 (52%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCG----HGSTN-DQL--RPSYASSLMDIQV 343
+K+I+ G H+ ++ + G L+ G G +GQ G H S + D P+ +L+ V
Sbjct: 566 IKQISSGYSHTLILNENGECLSIGQGEFGQLGIPLDHSSIDKDSFVNYPTVIPALLPYFV 625
Query: 344 EQIAAGLWHTVCI 356
E + G WH+V I
Sbjct: 626 ESVQCGRWHSVAI 638
Score = 86 (35.3 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 31/117 (26%), Positives = 50/117 (42%)
Query: 22 VYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSAD 79
++ WG G + I+ PI K++ CG L S+SG L +WGS++
Sbjct: 12 IFYWGR--GVNQGDKHIIEPIEVPELNK---KNIVQLSCGSTHTLVLSDSGDLYSWGSSN 66
Query: 80 DEGQSYLTSGK--HGETP--EPFPLPTEAS---VVKAAAGWAHCVSVTEAGEVYTWG 129
GQ K +G+ + F L S V++ + G +T+ G +Y WG
Sbjct: 67 SSGQLGHGDSKNQYGKPKNIKKFSLIKALSGDSVIQVSTGLDFTFVLTDQGSIYNWG 123
Score = 84 (34.6 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 22/71 (30%), Positives = 37/71 (52%)
Query: 361 RVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWG 420
+V FGG+ GV N +++ T + S + +SCG+ H L++ V SWG
Sbjct: 338 KVLSFGGSNDNNFLGGV--INNELQMM-TDQMNSIKIIQISCGSNHILALSDQYHVYSWG 394
Query: 421 WNKYGQLGLGD 431
++G+LG G+
Sbjct: 395 SAEHGKLGHGE 405
Score = 84 (34.6 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 22/79 (27%), Positives = 38/79 (48%)
Query: 342 QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE-------NVPKLLETPILES 394
+++QI++G HT+ ++ G G +FGQLG +D + N P ++ P L
Sbjct: 565 RIKQISSGYSHTLILNENGECLSIGQGEFGQLGIPLDHSSIDKDSFVNYPTVI--PALLP 622
Query: 395 KRAKVVSCGARHSAVLTED 413
+ V CG HS + +
Sbjct: 623 YFVESVQCGRWHSVAIVSN 641
Score = 76 (31.8 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 20/80 (25%), Positives = 39/80 (48%)
Query: 59 GCGFALATSESGKLITWGSADD------EGQSYLTSGKHG-ETPEPFPLPTE--ASVVKA 109
G LA S+ + +WGSA+ E S+++ +P+ E +V+
Sbjct: 377 GSNHILALSDQYHVYSWGSAEHGKLGHGEDYSFVSQNPRWINSPKKIKSLQEKGVTVISV 436
Query: 110 AAGWAHCVSVTEAGEVYTWG 129
++G++HC+++T + TWG
Sbjct: 437 SSGYSHCMALTLDSGILTWG 456
Score = 71 (30.1 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 15/61 (24%), Positives = 32/61 (52%)
Query: 69 SGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTW 128
S ++ WG ++G KH P P + ++V+ + G H + ++++G++Y+W
Sbjct: 9 SKQIFYWGRGVNQGD------KHIIEPIEVPELNKKNIVQLSCGSTHTLVLSDSGDLYSW 62
Query: 129 G 129
G
Sbjct: 63 G 63
Score = 68 (29.0 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 23/78 (29%), Positives = 37/78 (47%)
Query: 66 TSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT----EASVVKAAAGWAHCVSVT- 120
T +SG ++TWG D GQ L +G + PF + +V+ G+ + +T
Sbjct: 447 TLDSG-ILTWGKGSD-GQ--LGTGFRHDIWSPFEIKRVIDKNEKIVQICCGYFNSFFITL 502
Query: 121 EAGEVYTWGWRECVPSAK 138
E E+Y +GW +P K
Sbjct: 503 EKRELYQFGWS--IPLGK 518
Score = 52 (23.4 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 12/62 (19%), Positives = 31/62 (50%)
Query: 71 KLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
K++++G ++D ++L + E +++ + G H +++++ VY+WG
Sbjct: 338 KVLSFGGSNDN--NFLGGVINNELQMMTDQMNSIKIIQISCGSNHILALSDQYHVYSWGS 395
Query: 131 RE 132
E
Sbjct: 396 AE 397
Score = 48 (22.0 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 13/35 (37%), Positives = 17/35 (48%)
Query: 49 GDSWKDVCGGGCGFALATSESGKLITWGSADDEGQ 83
GDS V G F ++ G + WGS + EGQ
Sbjct: 97 GDSVIQV-STGLDFTFVLTDQGSIYNWGS-NIEGQ 129
>UNIPROTKB|B4DFC0 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 UniGene:Hs.32470 HGNC:HGNC:17499
EMBL:AC055860 EMBL:AC124058 EMBL:AC124078 EMBL:AK294022
IPI:IPI00977685 SMR:B4DFC0 STRING:B4DFC0 Ensembl:ENST00000532265
UCSC:uc010rcz.1 Uniprot:B4DFC0
Length = 174
Score = 159 (61.0 bits), Expect = 6.9e-11, P = 6.9e-11
Identities = 54/172 (31%), Positives = 82/172 (47%)
Query: 303 VVTDAGALLTFGWGLYGQCG--HGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEG 360
++T+ G +L+ G +GQ G HG + P A L +V IAAGL H V + G
Sbjct: 1 MLTENGQVLSCGSNSFGQLGVPHGPRRCVV-PQ-AIELHKEKVVCIAAGLRHAVAATASG 58
Query: 361 RVYVFGGNQFGQLGTGVDQAENVPKLL--ETPI----LESKRAKVVSCGARHSAVLTEDG 414
V+ +G G + + +P + P LE+ +A V G+ HSA LT+ G
Sbjct: 59 IVFQWGTG-LASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAG 117
Query: 415 QVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGW--WHTLLLAET 464
+V WG NK+GQL ++ +P + H F + W W T L+A+T
Sbjct: 118 EVYVWGSNKHGQLA-NEAAFLPVPQKIEAHCFQNEKVTAIWSGW-THLVAQT 167
Score = 109 (43.4 bits), Expect = 0.00047, P = 0.00047
Identities = 35/126 (27%), Positives = 55/126 (43%)
Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGH----GSTNDQL----RPSYASSLMDIQVEQ 345
IA G RH+ T +G + +G GL CG G T PS + L + +
Sbjct: 44 IAAGLRHAVAATASGIVFQWGTGL-ASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMC 102
Query: 346 IAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGAR 405
+ AG H+ ++ G VYV+G N+ GQL VP+ +E ++++ + G
Sbjct: 103 VLAGSDHSASLTDAGEVYVWGSNKHGQLANEAAFLP-VPQKIEAHCFQNEKVTAIWSGWT 161
Query: 406 HSAVLT 411
H T
Sbjct: 162 HLVAQT 167
>UNIPROTKB|F1P3N0 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104312 OMA:MVTLAKS EMBL:AADN02026016
EMBL:AADN02026017 IPI:IPI00579944 Ensembl:ENSGALT00000001779
Uniprot:F1P3N0
Length = 454
Score = 180 (68.4 bits), Expect = 7.6e-11, P = 7.6e-11
Identities = 52/184 (28%), Positives = 87/184 (47%)
Query: 285 KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPS----YASSLMD 340
K ++ V +++CG HS V+TD+ + T G YGQCG D++ + + D
Sbjct: 161 KPQKTRVLQVSCGRAHSLVLTDSEGVFTMGNNSYGQCGRKVVEDEIYSESHLIHQLNDFD 220
Query: 341 IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVV 400
+V Q+ G H++ + +G V+ G GQ G G +VP L I +V
Sbjct: 221 SRVVQVVCGQDHSLFRTKKGAVFACGWGADGQTGLGHYNITSVPTKLGGDIAGVNIVQVS 280
Query: 401 SCGARHSAVLTEDGQVLSWGWNKYGQLG-LGDSIDRNIPSLVPIHGFLPRNIACGWWHTL 459
S G AV +++G + WG ++Y QL + ++ N+P +P + ACG +
Sbjct: 281 SYGDCCLAV-SDEGDLFGWGNSEYLQLASVTETTQVNVPRHLPFKIGKIKEAACGGTGNI 339
Query: 460 LLAE 463
+L E
Sbjct: 340 VLTE 343
Score = 154 (59.3 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 56/189 (29%), Positives = 92/189 (48%)
Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGL--YGQCGHGSTNDQLR-PSYASSLMDIQ 342
AG + V +++ G V+D G L FGWG Y Q + Q+ P + + +
Sbjct: 272 AGVNIV-QVSSYGDCCLAVSDEGDL--FGWGNSEYLQLASVTETTQVNVPRHLPFKIG-K 327
Query: 343 VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAEN-VPKLLETPILE----SKRA 397
+++ A G + ++ EG V+V+G +G LG G + E VP+++ + S
Sbjct: 328 IKEAACGGTGNIVLTEEGAVFVWG---YGILGKGPNLTETAVPEMIPPSLFGWSDFSSDV 384
Query: 398 KV--VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGW 455
+V V CG H A LT G++ WG N G LG+G D+ P V I G + ++ACG
Sbjct: 385 RVARVRCGLSHFAALTNRGELFVWGKNLRGCLGIGRMEDQYFPWRVTIPGEVV-DVACGV 443
Query: 456 WHTLLLAET 464
H + + ++
Sbjct: 444 DHMVSMVKS 452
Score = 66 (28.3 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 30/101 (29%), Positives = 48/101 (47%)
Query: 59 GCGFALATSESGKLI-TWG---SADDE-G-QSYL---TSG-KHGETPEPFPLPTE----A 104
G GF L +S + + WG + D + G Q + T G ++ P P PLP E
Sbjct: 106 GYGFTLLSSNTTDITKVWGMGLNKDSQLGFQRSIRDRTKGYEYVLEPSPIPLPLEKPQKT 165
Query: 105 SVVKAAAGWAHCVSVTEAGEVYTWG---WRECVPSAKVTRD 142
V++ + G AH + +T++ V+T G + +C KV D
Sbjct: 166 RVLQVSCGRAHSLVLTDSEGVFTMGNNSYGQC--GRKVVED 204
Score = 51 (23.0 bits), Expect = 7.0e-09, Sum P(2) = 7.0e-09
Identities = 26/96 (27%), Positives = 40/96 (41%)
Query: 40 SPIPARLCGGDSWKDVCGGGCGFA--LATSESGKLITWG--SADDEGQSYLTSGKHGETP 95
SPIP L + V CG A L ++S + T G S G+ + + E+
Sbjct: 153 SPIPLPLEKPQKTR-VLQVSCGRAHSLVLTDSEGVFTMGNNSYGQCGRKVVEDEIYSESH 211
Query: 96 EPFPLPT-EASVVKAAAGWAHCVSVTEAGEVYTWGW 130
L ++ VV+ G H + T+ G V+ GW
Sbjct: 212 LIHQLNDFDSRVVQVVCGQDHSLFRTKKGAVFACGW 247
Score = 40 (19.1 bits), Expect = 9.5e-08, Sum P(2) = 9.5e-08
Identities = 6/17 (35%), Positives = 13/17 (76%)
Query: 213 KITKVAAGGRHTLILSD 229
++ +V+ G H+L+L+D
Sbjct: 166 RVLQVSCGRAHSLVLTD 182
>UNIPROTKB|F1MD33 [details] [associations]
symbol:F1MD33 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0005929 "cilium" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104160 EMBL:DAAA02073693
IPI:IPI00698306 Ensembl:ENSBTAT00000005090 OMA:SAEKHET
Uniprot:F1MD33
Length = 158
Score = 157 (60.3 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 44/125 (35%), Positives = 68/125 (54%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGS---TNDQLRPSYASSLMDIQVEQIA 347
+K+++ G SA +T G L TFG G+ G N ++ P + + +V Q+A
Sbjct: 39 IKQLSAGSNTSAALTAEGELYTFGEPESGKLGLPPKLLVNHKV-PQLVPGISE-KVIQVA 96
Query: 348 AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGARH 406
G HTV ++ E VY FG QFGQLG G E + PK++E+ ++ K+ V CG H
Sbjct: 97 CGGGHTVVLT-EKAVYTFGLGQFGQLGLGTFTFETSEPKVIES--VKDKKISHVCCGENH 153
Query: 407 SAVLT 411
+A++T
Sbjct: 154 TALIT 158
Score = 155 (59.6 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 49/160 (30%), Positives = 81/160 (50%)
Query: 308 GALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ--VEQIAAGLWHTVCISVEGRVYVF 365
G + G GQ G G T D+ + S Q ++Q++AG + ++ EG +Y F
Sbjct: 3 GQVYATGGNNEGQLGLGDT-DERSAFHLISFFTSQHKIKQLSAGSNTSAALTAEGELYTF 61
Query: 366 GGNQFGQLGTGVDQAEN--VPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNK 423
G + G+LG N VP+L+ P + K +V +CG H+ VLTE V ++G +
Sbjct: 62 GEPESGKLGLPPKLLVNHKVPQLV--PGISEKVIQV-ACGGGHTVVLTEKA-VYTFGLGQ 117
Query: 424 YGQLGLGD-SIDRNIPSLVP-IHGFLPRNIACGWWHTLLL 461
+GQLGLG + + + P ++ + ++ CG HT L+
Sbjct: 118 FGQLGLGTFTFETSEPKVIESVKDKKISHVCCGENHTALI 157
Score = 146 (56.5 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 38/106 (35%), Positives = 56/106 (52%)
Query: 360 GRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSW 419
G+VY GGN GQLG G D E L + + K +S G+ SA LT +G++ ++
Sbjct: 3 GQVYATGGNNEGQLGLG-DTDERSAFHLISFFTSQHKIKQLSAGSNTSAALTAEGELYTF 61
Query: 420 GWNKYGQLGLGDS--IDRNIPSLVPIHGFLPRNIACGWWHTLLLAE 463
G + G+LGL ++ +P LVP +ACG HT++L E
Sbjct: 62 GEPESGKLGLPPKLLVNHKVPQLVPGISEKVIQVACGGGHTVVLTE 107
>FB|FBgn0031769 [details] [associations]
symbol:CG9135 species:7227 "Drosophila melanogaster"
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
[GO:0005875 "microtubule associated complex" evidence=IDA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005875 EMBL:AE014134
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GeneTree:ENSGT00700000104160 OMA:FGENKLG EMBL:AY058682
EMBL:AM294309 EMBL:AM294310 EMBL:AM294311 EMBL:AM294312
EMBL:AM294313 EMBL:AM294314 EMBL:AM294315 EMBL:AM294316
EMBL:AM294317 EMBL:AM294318 EMBL:FM245376 EMBL:FM245377
EMBL:FM245378 EMBL:FM245379 EMBL:FM245380 EMBL:FM245381
EMBL:FM245382 EMBL:FM245383 EMBL:FM245384 EMBL:FM245385
EMBL:FM245386 EMBL:FM245387 RefSeq:NP_608985.1 RefSeq:NP_723150.1
UniGene:Dm.4234 HSSP:P18754 SMR:Q9VMI5 IntAct:Q9VMI5
MINT:MINT-744911 STRING:Q9VMI5 EnsemblMetazoa:FBtr0079185
EnsemblMetazoa:FBtr0079186 GeneID:33850 KEGG:dme:Dmel_CG9135
UCSC:CG9135-RA FlyBase:FBgn0031769 InParanoid:Q9VMI5
OrthoDB:EOG4QV9T7 ChiTaRS:CG9135 GenomeRNAi:33850 NextBio:785598
Uniprot:Q9VMI5
Length = 487
Score = 154 (59.3 bits), Expect = 1.4e-10, Sum P(3) = 1.4e-10
Identities = 45/184 (24%), Positives = 91/184 (49%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVE---QIA 347
+ + ACG H+ + + ++G+G +G+ GH D++ P D Q +
Sbjct: 299 IVDFACGNNHTVAIDSKKRVYSWGFGGFGRLGHAEPKDEMVPRLMK-FFDTQGRGGRSVF 357
Query: 348 AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHS 407
G ++ ++ G +++FG N+ TG +A PK ++ L + C A S
Sbjct: 358 CGSTFSLIVNELGLLFLFGQNK----KTG--EANMYPKPVQD--LSGWNITDIGC-ANTS 408
Query: 408 AVLTEDGQVLSWGWNK-YGQLGLGD-----SIDRNIPSLVPIHGFLPRNIACGWWHTLLL 461
+++ D +++WG + +G+LG+G+ ++ + +P L I +P+ + G+ HT+LL
Sbjct: 409 IMISADDTLIAWGASPTFGELGIGEFQKSSTVPKEVPKLDNIK--IPQ-VTMGYSHTVLL 465
Query: 462 AETT 465
+TT
Sbjct: 466 VDTT 469
Score = 136 (52.9 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 49/164 (29%), Positives = 78/164 (47%)
Query: 308 GALLTFG---WGLYGQCGHGSTNDQLRPSYAS--SLMDIQVEQIAAG--LWHTVCISVEG 360
G +L G W L G+ + ++RP+ S + + +A+G HT+ I+++
Sbjct: 77 GQMLIAGMVTWDLTGKRDRKNVT-KVRPNLYSFHRFTEEKYRYVASGPSAAHTILINMDR 135
Query: 361 RVYVFGGNQFGQLGTGVD-QAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSW 419
+ FG N GQLG D + P ++ P LE + G H+ LT+ G V +
Sbjct: 136 KALGFGRNPSGQLGLSQDIKLAEKPTII--PALEQLNIVQAAVGRHHTLFLTDTGTVYAC 193
Query: 420 GWNKYGQLGLGDSIDRNIPSLVPIHGFLPR--NIACGWWHTLLL 461
G NK GQ G+G++ NI S PI+ P I CG +++L
Sbjct: 194 GENKSGQCGVGNT-HANIYSPTPINYRGPPIIRIGCGAEFSVIL 236
Score = 132 (51.5 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 42/132 (31%), Positives = 64/132 (48%)
Query: 300 HSAVVTDAGALLTFGWGLYGQCGHGSTNDQL--RPSYASSLMDIQVEQIAAGLWHTVCIS 357
H+ ++ L FG GQ G S + +L +P+ +L + + Q A G HT+ ++
Sbjct: 127 HTILINMDRKALGFGRNPSGQLGL-SQDIKLAEKPTIIPALEQLNIVQAAVGRHHTLFLT 185
Query: 358 VEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKV-VSCGARHSAVLTEDGQV 416
G VY G N+ GQ G G A N+ TPI + + CGA S +L G +
Sbjct: 186 DTGTVYACGENKSGQCGVGNTHA-NIYS--PTPINYRGPPIIRIGCGAEFSVILDIKGSL 242
Query: 417 LSWGWNKYGQLG 428
++G +YGQLG
Sbjct: 243 HTFGLPEYGQLG 254
Score = 124 (48.7 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 36/140 (25%), Positives = 68/140 (48%)
Query: 328 DQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL 387
++ + + + + +Q+ A G HTV I + RVY +G FG+LG + E VP+L+
Sbjct: 284 EKSKEGHVTPVDGVQIVDFACGNNHTVAIDSKKRVYSWGFGGFGRLGHAEPKDEMVPRLM 343
Query: 388 ETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFL 447
+ + + + V CG+ S ++ E G + +G NK + G + + + L G+
Sbjct: 344 KFFDTQGRGGRSVFCGSTFSLIVNELGLLFLFGQNK--KTGEANMYPKPVQDL---SGWN 398
Query: 448 PRNIACGWWHTLLLAETTQI 467
+I C ++ A+ T I
Sbjct: 399 ITDIGCANTSIMISADDTLI 418
Score = 66 (28.3 bits), Expect = 1.4e-10, Sum P(3) = 1.4e-10
Identities = 19/60 (31%), Positives = 30/60 (50%)
Query: 71 KLITWGSADDEGQSYLTSG-KHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
K + +G + GQ L+ K E P P + ++V+AA G H + +T+ G VY G
Sbjct: 136 KALGFGR-NPSGQLGLSQDIKLAEKPTIIPALEQLNIVQAAVGRHHTLFLTDTGTVYACG 194
Score = 49 (22.3 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 13/30 (43%), Positives = 16/30 (53%)
Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
T+ P L LN I + A G HTL L+D
Sbjct: 161 TIIPALEQLN----IVQAAVGRHHTLFLTD 186
Score = 45 (20.9 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 24/88 (27%), Positives = 34/88 (38%)
Query: 213 KITKVAAG--GRHTLILSDMXXXXXXXXXXXXXXXXXSRIKMVPTPHLIPCLEH-----A 265
K VA+G HT++++ IK+ P +IP LE A
Sbjct: 115 KYRYVASGPSAAHTILINMDRKALGFGRNPSGQLGLSQDIKLAEKPTIIPALEQLNIVQA 174
Query: 266 ASGKDRPL-LVRQGSV-----NSSGKAG 287
A G+ L L G+V N SG+ G
Sbjct: 175 AVGRHHTLFLTDTGTVYACGENKSGQCG 202
Score = 40 (19.1 bits), Expect = 1.4e-10, Sum P(3) = 1.4e-10
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 206 VTLNPGVKITKVAAGGRHTLIL 227
VT GV+I A G HT+ +
Sbjct: 291 VTPVDGVQIVDFACGNNHTVAI 312
>ZFIN|ZDB-GENE-030616-132 [details] [associations]
symbol:mycbp2 "MYC binding protein 2" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0021986 "habenula
development" evidence=IMP] [GO:0016198 "axon choice point
recognition" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0007411 "axon guidance" evidence=IMP] [GO:0031290 "retinal
ganglion cell axon guidance" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0042068 "regulation of pteridine
metabolic process" evidence=IMP] InterPro:IPR001841
InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-030616-132
GO:GO:0005737 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872
GO:GO:0008270 GO:GO:0016198 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284 GO:GO:0031290
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 PANTHER:PTHR12846
GO:GO:0021986 EMBL:BX510646 EMBL:AL840634 EMBL:CR628366
EMBL:CU138551 IPI:IPI00993071 Ensembl:ENSDART00000124901
ArrayExpress:F1QI76 Bgee:F1QI76 GO:GO:0042068 Uniprot:F1QI76
Length = 4648
Score = 163 (62.4 bits), Expect = 1.6e-10, Sum P(3) = 1.6e-10
Identities = 38/119 (31%), Positives = 63/119 (52%)
Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWH 352
+++CG HS V+ + G + TFG+G +GQ GHG N + P+ +L Q+ AG H
Sbjct: 929 QVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGSPTLVQALPGPST-QVTAGSNH 987
Query: 353 TVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLT 411
T + ++G+V+ FG GQLG P +L+ P +K + + + GA++ T
Sbjct: 988 TAVLLMDGQVFTFGSFSKGQLGR--------P-ILDMPYWNAKPSPMPNIGAKYGRKAT 1037
Score = 140 (54.3 bits), Expect = 6.1e-09, Sum P(2) = 6.1e-09
Identities = 33/89 (37%), Positives = 49/89 (55%)
Query: 340 DIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKV 399
+++ Q++ G H+V + G VY FG Q GQLG G + P L++ L +V
Sbjct: 924 ELRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGSPTLVQA--LPGPSTQV 981
Query: 400 VSCGARHSAVLTEDGQVLSWGWNKYGQLG 428
+ G+ H+AVL DGQV ++G GQLG
Sbjct: 982 TA-GSNHTAVLLMDGQVFTFGSFSKGQLG 1009
Score = 123 (48.4 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 29/72 (40%), Positives = 39/72 (54%)
Query: 396 RAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGW 455
RA VSCG HS VL E+G V ++G+ ++GQLG GD R P+LV + G
Sbjct: 926 RAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGSPTLVQALPGPSTQVTAGS 985
Query: 456 WHTLLLAETTQI 467
HT +L Q+
Sbjct: 986 NHTAVLLMDGQV 997
Score = 90 (36.7 bits), Expect = 1.6e-10, Sum P(3) = 1.6e-10
Identities = 50/186 (26%), Positives = 74/186 (39%)
Query: 48 GGDSWKDVCGGGCGFALATSESGKLITWGSADDEG--QSYLTSGKHGETPEPFPLPTEAS 105
G D + G G FAL + SGK+ G G Q +SGK E P+
Sbjct: 517 GFDEEAALIGAGREFALMKTASGKIYYTGKYQSLGIKQGGPSSGKWVE----LPVTKSPK 572
Query: 106 VVKAAAGW--AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE 163
+V+ + G +H + V E G V+ G SA D S S ++ K P +
Sbjct: 573 IVQFSVGHDGSHALLVAEDGSVFFTG------SASKGEDGESTKSRRQPKPYK----PKK 622
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASG-DEFFTLSPCLVTLNPGVKITKVAAGGR 222
K A +S ++ E G D ++ S C V+ G +T+VA G
Sbjct: 623 MIKLETKMAVYTACNNGSSSIVTKDGELYMFGKDAIYSDSTCQVSDLKGHFVTQVAMGKA 682
Query: 223 HTLILS 228
HT +L+
Sbjct: 683 HTCVLT 688
Score = 56 (24.8 bits), Expect = 4.1e-07, Sum P(3) = 4.1e-07
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWG 129
V + A G AH +T++GEV+T+G
Sbjct: 674 VTQVAMGKAHTCVLTKSGEVWTFG 697
Score = 40 (19.1 bits), Expect = 1.6e-10, Sum P(3) = 1.6e-10
Identities = 8/17 (47%), Positives = 9/17 (52%)
Query: 402 CGARHSAVLTEDGQVLS 418
CG RH L+ G V S
Sbjct: 4329 CGTRHGTELSAVGSVCS 4345
Score = 38 (18.4 bits), Expect = 2.5e-05, Sum P(3) = 2.5e-05
Identities = 18/88 (20%), Positives = 34/88 (38%)
Query: 170 KRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
K A ++ K S + P+SG ++ L P VT +P + V G H L++++
Sbjct: 535 KTASGKIYYTGKYQSLGIKQGGPSSG-KWVEL-P--VTKSPKIVQFSVGHDGSHALLVAE 590
Query: 230 MXXXXXXXXXXXXXXXXXSRIKMVPTPH 257
++ + P P+
Sbjct: 591 DGSVFFTGSASKGEDGESTKSRRQPKPY 618
>UNIPROTKB|F1PB36 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0046872 GO:GO:0008270 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR008979 SUPFAM:SSF49785 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 PANTHER:PTHR12846
EMBL:AAEX03013255 EMBL:AAEX03013256 EMBL:AAEX03013257
Ensembl:ENSCAFT00000008311 Uniprot:F1PB36
Length = 4640
Score = 162 (62.1 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 38/119 (31%), Positives = 63/119 (52%)
Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWH 352
+++CG HS V+ + G + TFG+G +GQ GHG N + P+ +L Q+ AG H
Sbjct: 906 QVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPST-QVTAGSNH 964
Query: 353 TVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLT 411
T + ++G+V+ FG GQLG P +L+ P +K A + + G+++ T
Sbjct: 965 TAVLLMDGQVFTFGSFSKGQLGR--------P-ILDVPYWNAKPAPMPNIGSKYGRKAT 1014
Score = 141 (54.7 bits), Expect = 5.7e-10, Sum P(3) = 5.7e-10
Identities = 33/89 (37%), Positives = 49/89 (55%)
Query: 340 DIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKV 399
+++ Q++ G H+V + G VY FG Q GQLG G + P L++ L +V
Sbjct: 901 ELRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQA--LPGPSTQV 958
Query: 400 VSCGARHSAVLTEDGQVLSWGWNKYGQLG 428
+ G+ H+AVL DGQV ++G GQLG
Sbjct: 959 TA-GSNHTAVLLMDGQVFTFGSFSKGQLG 986
Score = 124 (48.7 bits), Expect = 3.8e-08, Sum P(3) = 3.8e-08
Identities = 29/72 (40%), Positives = 39/72 (54%)
Query: 396 RAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGW 455
RA VSCG HS VL E+G V ++G+ ++GQLG GD R P+LV + G
Sbjct: 903 RAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQVTAGS 962
Query: 456 WHTLLLAETTQI 467
HT +L Q+
Sbjct: 963 NHTAVLLMDGQV 974
Score = 81 (33.6 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 49/185 (26%), Positives = 71/185 (38%)
Query: 48 GGDSWKDVCGGGCGFALATSESGKLITWGSADDEG--QSYLTSGKHGETPEPFPLPTEAS 105
G D V G G FAL + SGK+ G G Q ++GK E P+
Sbjct: 488 GFDEESAVLGAGREFALMKTSSGKIYYTGKYQSLGIKQGGPSAGKWVE----LPITKSPK 543
Query: 106 VVKAAAGW--AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE 163
+V + G +H + V E G ++ G SA D S S ++ K P +
Sbjct: 544 IVHFSVGHDGSHALLVAEDGSIFFTG------SASKGEDGESTKSRRQSKPYK----PKK 593
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASG-DEFFTLSPCLVTLNPGVKITKVAAGGR 222
K +S ++ E G D ++ S LVT G +T+VA G
Sbjct: 594 IIKMEGKIVVYTACNNGSSSVISKDGELYMFGKDAIYSDSSSLVTDLKGHFVTQVAMGKA 653
Query: 223 HTLIL 227
HT +L
Sbjct: 654 HTCVL 658
Score = 67 (28.6 bits), Expect = 5.7e-10, Sum P(3) = 5.7e-10
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 290 YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGH--GSTN 327
+V ++A G H+ V+ G + TFG GQCG G+ N
Sbjct: 644 FVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGRDTGAMN 683
Score = 50 (22.7 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 16/52 (30%), Positives = 26/52 (50%)
Query: 81 EGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGWAHCVSVTEAGEVYTWG 129
+G+ Y+ GK + L T+ V + A G AH + + GEV+T+G
Sbjct: 618 DGELYMF-GKDAIYSDSSSLVTDLKGHFVTQVAMGKAHTCVLMKNGEVWTFG 668
>UNIPROTKB|J9PB77 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0046872 GO:GO:0008270 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR008979 SUPFAM:SSF49785 PROSITE:PS00626 PROSITE:PS50012
InterPro:IPR004939 PROSITE:PS51284 InterPro:IPR012983 Pfam:PF08005
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194
GeneTree:ENSGT00390000011403 PANTHER:PTHR12846 OMA:LLSILHW
EMBL:AAEX03013255 EMBL:AAEX03013256 EMBL:AAEX03013257
Ensembl:ENSCAFT00000044597 Uniprot:J9PB77
Length = 4727
Score = 162 (62.1 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 38/119 (31%), Positives = 63/119 (52%)
Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWH 352
+++CG HS V+ + G + TFG+G +GQ GHG N + P+ +L Q+ AG H
Sbjct: 944 QVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPST-QVTAGSNH 1002
Query: 353 TVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLT 411
T + ++G+V+ FG GQLG P +L+ P +K A + + G+++ T
Sbjct: 1003 TAVLLMDGQVFTFGSFSKGQLGR--------P-ILDVPYWNAKPAPMPNIGSKYGRKAT 1052
Score = 141 (54.7 bits), Expect = 6.1e-10, Sum P(3) = 6.1e-10
Identities = 33/89 (37%), Positives = 49/89 (55%)
Query: 340 DIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKV 399
+++ Q++ G H+V + G VY FG Q GQLG G + P L++ L +V
Sbjct: 939 ELRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQA--LPGPSTQV 996
Query: 400 VSCGARHSAVLTEDGQVLSWGWNKYGQLG 428
+ G+ H+AVL DGQV ++G GQLG
Sbjct: 997 TA-GSNHTAVLLMDGQVFTFGSFSKGQLG 1024
Score = 124 (48.7 bits), Expect = 4.1e-08, Sum P(3) = 4.1e-08
Identities = 29/72 (40%), Positives = 39/72 (54%)
Query: 396 RAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGW 455
RA VSCG HS VL E+G V ++G+ ++GQLG GD R P+LV + G
Sbjct: 941 RAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQVTAGS 1000
Query: 456 WHTLLLAETTQI 467
HT +L Q+
Sbjct: 1001 NHTAVLLMDGQV 1012
Score = 81 (33.6 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 49/185 (26%), Positives = 71/185 (38%)
Query: 48 GGDSWKDVCGGGCGFALATSESGKLITWGSADDEG--QSYLTSGKHGETPEPFPLPTEAS 105
G D V G G FAL + SGK+ G G Q ++GK E P+
Sbjct: 526 GFDEESAVLGAGREFALMKTSSGKIYYTGKYQSLGIKQGGPSAGKWVE----LPITKSPK 581
Query: 106 VVKAAAGW--AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE 163
+V + G +H + V E G ++ G SA D S S ++ K P +
Sbjct: 582 IVHFSVGHDGSHALLVAEDGSIFFTG------SASKGEDGESTKSRRQSKPYK----PKK 631
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASG-DEFFTLSPCLVTLNPGVKITKVAAGGR 222
K +S ++ E G D ++ S LVT G +T+VA G
Sbjct: 632 IIKMEGKIVVYTACNNGSSSVISKDGELYMFGKDAIYSDSSSLVTDLKGHFVTQVAMGKA 691
Query: 223 HTLIL 227
HT +L
Sbjct: 692 HTCVL 696
Score = 67 (28.6 bits), Expect = 6.1e-10, Sum P(3) = 6.1e-10
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 290 YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGH--GSTN 327
+V ++A G H+ V+ G + TFG GQCG G+ N
Sbjct: 682 FVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGRDTGAMN 721
Score = 50 (22.7 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 16/52 (30%), Positives = 26/52 (50%)
Query: 81 EGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGWAHCVSVTEAGEVYTWG 129
+G+ Y+ GK + L T+ V + A G AH + + GEV+T+G
Sbjct: 656 DGELYMF-GKDAIYSDSSSLVTDLKGHFVTQVAMGKAHTCVLMKNGEVWTFG 706
>RGD|1312048 [details] [associations]
symbol:Mycbp2 "MYC binding protein 2, E3 ubiquitin protein
ligase" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0008045
"motor neuron axon guidance" evidence=ISO] [GO:0015630 "microtubule
cytoskeleton" evidence=ISO] [GO:0021785 "branchiomotor neuron axon
guidance" evidence=ISO] [GO:0021952 "central nervous system
projection neuron axonogenesis" evidence=ISO] [GO:0030424 "axon"
evidence=ISO] [GO:0032880 "regulation of protein localization"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] [GO:0048667 "cell morphogenesis involved in neuron
differentiation" evidence=ISO] [GO:0051493 "regulation of
cytoskeleton organization" evidence=ISO] InterPro:IPR027047
RGD:1312048 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 InterPro:IPR014756 SUPFAM:SSF81296 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR012983 Pfam:PF08005
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194 EMBL:CH473951
PANTHER:PTHR12846 IPI:IPI00950595 UniGene:Rn.13538
Ensembl:ENSRNOT00000064927 UCSC:RGD:1312048 Uniprot:D4A722
Length = 2667
Score = 162 (62.1 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 38/119 (31%), Positives = 63/119 (52%)
Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWH 352
+++CG HS V+ + G + TFG+G +GQ GHG N + P+ +L Q+ AG H
Sbjct: 920 QVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPST-QVTAGSNH 978
Query: 353 TVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLT 411
T + ++G+V+ FG GQLG P +L+ P +K A + + G+++ T
Sbjct: 979 TAVLVMDGQVFTFGSFSKGQLGR--------P-ILDVPYWNAKPAPMPNIGSKYGRKAT 1028
Score = 143 (55.4 bits), Expect = 2.7e-10, Sum P(3) = 2.7e-10
Identities = 33/89 (37%), Positives = 49/89 (55%)
Query: 340 DIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKV 399
+++ Q++ G H+V + G VY FG Q GQLG G + P L++ L +V
Sbjct: 915 EVRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQA--LPGPSTQV 972
Query: 400 VSCGARHSAVLTEDGQVLSWGWNKYGQLG 428
+ G+ H+AVL DGQV ++G GQLG
Sbjct: 973 TA-GSNHTAVLVMDGQVFTFGSFSKGQLG 1000
Score = 125 (49.1 bits), Expect = 2.3e-08, Sum P(3) = 2.3e-08
Identities = 29/72 (40%), Positives = 39/72 (54%)
Query: 396 RAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGW 455
RA VSCG HS VL E+G V ++G+ ++GQLG GD R P+LV + G
Sbjct: 917 RAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQVTAGS 976
Query: 456 WHTLLLAETTQI 467
HT +L Q+
Sbjct: 977 NHTAVLVMDGQV 988
Score = 76 (31.8 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 26/81 (32%), Positives = 33/81 (40%)
Query: 295 ACGGRHSAVVTDAGALLTFGW-GLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
AC S+V++ G L FG +Y S S L V Q+A G HT
Sbjct: 620 ACNNGSSSVISKDGELYMFGKDAIYSDSS----------SLVSDLKGHFVTQVAMGKAHT 669
Query: 354 VCISVEGRVYVFGGNQFGQLG 374
+ G V+ FG N GQ G
Sbjct: 670 CVLMKNGEVWTFGVNNKGQCG 690
Score = 75 (31.5 bits), Expect = 2.7e-10, Sum P(3) = 2.7e-10
Identities = 48/185 (25%), Positives = 72/185 (38%)
Query: 48 GGDSWKDVCGGGCGFALATSESGKLITWGSADDEG--QSYLTSGKHGETPEPFPLPTEAS 105
G D + G G FAL + +GK+ G G Q ++GK E P+
Sbjct: 502 GFDEESAILGAGREFALMKTANGKIYYTGKYQSLGIKQGGPSAGKWVE----LPITKSPK 557
Query: 106 VVKAAAGW--AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE 163
+V + G +H + V E G V+ G SA D SA S ++ K P +
Sbjct: 558 IVHFSVGHDGSHALLVAEDGSVFFTG------SASKGEDGESAKSRRQSKPYK----PKK 607
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASG-DEFFTLSPCLVTLNPGVKITKVAAGGR 222
K +S ++ E G D ++ S LV+ G +T+VA G
Sbjct: 608 IIKMEGKIVVCTACNNGSSSVISKDGELYMFGKDAIYSDSSSLVSDLKGHFVTQVAMGKA 667
Query: 223 HTLIL 227
HT +L
Sbjct: 668 HTCVL 672
Score = 67 (28.6 bits), Expect = 2.7e-10, Sum P(3) = 2.7e-10
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 290 YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGH--GSTN 327
+V ++A G H+ V+ G + TFG GQCG G+ N
Sbjct: 658 FVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGRDTGAMN 697
Score = 47 (21.6 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWG 129
V + A G AH + + GEV+T+G
Sbjct: 659 VTQVAMGKAHTCVLMKNGEVWTFG 682
>MGI|MGI:1918677 [details] [associations]
symbol:Ibtk "inhibitor of Bruton agammaglobulinemia tyrosine
kinase" species:10090 "Mus musculus" [GO:0001933 "negative
regulation of protein phosphorylation" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0016020 "membrane" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0030292
"protein tyrosine kinase inhibitor activity" evidence=ISO]
[GO:0051209 "release of sequestered calcium ion into cytosol"
evidence=ISO] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=ISO] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 MGI:MGI:1918677
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0016020 GO:GO:0051209 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 EMBL:CH466522
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GO:GO:0030292 CTD:25998 HOVERGEN:HBG081779 OMA:VSALHHK
OrthoDB:EOG4J6RQ1 ChiTaRS:IBTK EMBL:BC137798 EMBL:AK030895
EMBL:AK077387 EMBL:AK129353 IPI:IPI00660767 IPI:IPI00750982
RefSeq:NP_001074751.1 UniGene:Mm.22315 UniGene:Mm.487092
ProteinModelPortal:Q6ZPR6 SMR:Q6ZPR6 PhosphoSite:Q6ZPR6
PaxDb:Q6ZPR6 PRIDE:Q6ZPR6 Ensembl:ENSMUST00000039213 GeneID:108837
KEGG:mmu:108837 GeneTree:ENSGT00700000104160 HOGENOM:HOG000090207
InParanoid:Q6ZPR6 NextBio:361375 Bgee:Q6ZPR6 Genevestigator:Q6ZPR6
Uniprot:Q6ZPR6
Length = 1352
Score = 181 (68.8 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 61/197 (30%), Positives = 95/197 (48%)
Query: 274 LVRQG-SVNSSGKAGRSYVKEIACGGRHSAVV---TDAGALLTFGWGLYGQCGHGSTNDQ 329
L++ G S+ K G S + ++ R + VV TD + T+G GHGS N +
Sbjct: 105 LLKHGVSLYMQDKEGLSPL-DLLMKDRPTHVVFKDTDPTEVYTWGDNTNFTLGHGSQNSK 163
Query: 330 LRPSYAS--SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL 387
P S + V+Q+ +H+V +S +G+VY G + G+LG G +Q VP+L+
Sbjct: 164 HHPELLDLFSRSGVYVKQVVLCKFHSVFLSQKGQVYTCGHGRGGRLGHGDEQTCLVPRLV 223
Query: 388 ETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL-GDSIDRNIPSLVPIHGF 446
E L V+ H+ VLT+DG V ++G N + QLG+ N+P +
Sbjct: 224 EG--LSGHNCSQVAAAKDHTVVLTDDGCVYTFGLNMFHQLGIIPPPASCNVPRQIQAKYL 281
Query: 447 LPRNI---ACGWWHTLL 460
R I A G +HT+L
Sbjct: 282 KGRTIIGVAAGRFHTVL 298
Score = 176 (67.0 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 48/140 (34%), Positives = 68/140 (48%)
Query: 290 YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAG 349
YVK++ HS ++ G + T G G G+ GHG L P L Q+AA
Sbjct: 178 YVKQVVLCKFHSVFLSQKGQVYTCGHGRGGRLGHGDEQTCLVPRLVEGLSGHNCSQVAAA 237
Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGARHSA 408
HTV ++ +G VY FG N F QLG A NVP+ ++ L+ + V+ G H+
Sbjct: 238 KDHTVVLTDDGCVYTFGLNMFHQLGIIPPPASCNVPRQIQAKYLKGRTIIGVAAGRFHTV 297
Query: 409 VLTEDGQVLSWGWNKYGQLG 428
+ T + V + G N GQLG
Sbjct: 298 LWTREA-VYTLGLNG-GQLG 315
Score = 42 (19.8 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 7/10 (70%), Positives = 8/10 (80%)
Query: 120 TEAGEVYTWG 129
T+ EVYTWG
Sbjct: 139 TDPTEVYTWG 148
>UNIPROTKB|E9PR50 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058
EMBL:AC124078 IPI:IPI00983666 ProteinModelPortal:E9PR50 SMR:E9PR50
Ensembl:ENST00000530613 ArrayExpress:E9PR50 Bgee:E9PR50
Uniprot:E9PR50
Length = 165
Score = 153 (58.9 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 51/166 (30%), Positives = 77/166 (46%)
Query: 303 VVTDAGALLTFGWGLYGQCG--HGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEG 360
++T+ G +L+ G +GQ G HG + P A L +V IAAGL H V + G
Sbjct: 1 MLTENGQVLSCGSNSFGQLGVPHGPRRCVV-PQ-AIELHKEKVVCIAAGLRHAVAATASG 58
Query: 361 RVYVFGGNQFGQLGTGVDQAENVPKLL--ETPI----LESKRAKVVSCGARHSAVLTEDG 414
V+ +G G + + +P + P LE+ +A V G+ HSA LT+ G
Sbjct: 59 IVFQWGTG-LASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAG 117
Query: 415 QVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIAC---GWWH 457
+V WG NK+GQL ++ +P + H F + GW H
Sbjct: 118 EVYVWGSNKHGQLA-NEAAFLPVPQKIEAHCFQNEKVTAIWSGWTH 162
Score = 108 (43.1 bits), Expect = 0.00041, P = 0.00041
Identities = 34/121 (28%), Positives = 54/121 (44%)
Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGH----GSTNDQL----RPSYASSLMDIQVEQ 345
IA G RH+ T +G + +G GL CG G T PS + L + +
Sbjct: 44 IAAGLRHAVAATASGIVFQWGTGL-ASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMC 102
Query: 346 IAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGAR 405
+ AG H+ ++ G VYV+G N+ GQL VP+ +E ++++ + G
Sbjct: 103 VLAGSDHSASLTDAGEVYVWGSNKHGQLANEAAFLP-VPQKIEAHCFQNEKVTAIWSGWT 161
Query: 406 H 406
H
Sbjct: 162 H 162
>UNIPROTKB|E9PDR5 [details] [associations]
symbol:IBTK "Inhibitor of Bruton tyrosine kinase"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PROSITE:PS50012 EMBL:AL050333
HGNC:HGNC:17853 ChiTaRS:IBTK IPI:IPI00964822
ProteinModelPortal:E9PDR5 SMR:E9PDR5 Ensembl:ENST00000503631
UCSC:uc011dyw.1 ArrayExpress:E9PDR5 Bgee:E9PDR5 Uniprot:E9PDR5
Length = 1152
Score = 180 (68.4 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 62/197 (31%), Positives = 94/197 (47%)
Query: 274 LVRQG-SVNSSGKAGRSYVKEIACGGRHSAVV---TDAGALLTFGWGLYGQCGHGSTNDQ 329
L++ G S+ K G S + ++ R + VV TD + T+G GHGS N +
Sbjct: 105 LLKHGVSLYIQDKEGLSAL-DLVMKDRPTHVVFKNTDPTDVYTWGDNTNFTLGHGSQNSK 163
Query: 330 LRPSYAS--SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL 387
P S I ++Q+ +H+V +S +G+VY G G+LG G +Q VP+L+
Sbjct: 164 HHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCLVPRLV 223
Query: 388 ETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL-GDSIDRNIPSLVPIHGF 446
E L V+ H+ VLTEDG V ++G N + QLG+ N+P +
Sbjct: 224 EG--LNGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQLGIIPPPSSCNVPRQIQAKYL 281
Query: 447 LPRNI---ACGWWHTLL 460
R I A G +HT+L
Sbjct: 282 KGRTIIGVAAGRFHTVL 298
Score = 169 (64.5 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 46/140 (32%), Positives = 68/140 (48%)
Query: 290 YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAG 349
Y+K++ HS ++ G + T G G G+ GHG L P L Q+AA
Sbjct: 178 YIKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAA 237
Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGARHSA 408
HTV ++ +G VY FG N F QLG + NVP+ ++ L+ + V+ G H+
Sbjct: 238 KDHTVVLTEDGCVYTFGLNIFHQLGIIPPPSSCNVPRQIQAKYLKGRTIIGVAAGRFHTV 297
Query: 409 VLTEDGQVLSWGWNKYGQLG 428
+ T + V + G N GQLG
Sbjct: 298 LWTREA-VYTMGLNG-GQLG 315
Score = 39 (18.8 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 6/10 (60%), Positives = 8/10 (80%)
Query: 120 TEAGEVYTWG 129
T+ +VYTWG
Sbjct: 139 TDPTDVYTWG 148
>UNIPROTKB|E7EPI0 [details] [associations]
symbol:IBTK "Inhibitor of Bruton tyrosine kinase"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PROSITE:PS50012 EMBL:AL050333
HGNC:HGNC:17853 ChiTaRS:IBTK IPI:IPI00964356
ProteinModelPortal:E7EPI0 SMR:E7EPI0 Ensembl:ENST00000510291
UCSC:uc011dyv.1 ArrayExpress:E7EPI0 Bgee:E7EPI0 Uniprot:E7EPI0
Length = 1338
Score = 180 (68.4 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 62/197 (31%), Positives = 94/197 (47%)
Query: 274 LVRQG-SVNSSGKAGRSYVKEIACGGRHSAVV---TDAGALLTFGWGLYGQCGHGSTNDQ 329
L++ G S+ K G S + ++ R + VV TD + T+G GHGS N +
Sbjct: 105 LLKHGVSLYIQDKEGLSAL-DLVMKDRPTHVVFKNTDPTDVYTWGDNTNFTLGHGSQNSK 163
Query: 330 LRPSYAS--SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL 387
P S I ++Q+ +H+V +S +G+VY G G+LG G +Q VP+L+
Sbjct: 164 HHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCLVPRLV 223
Query: 388 ETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL-GDSIDRNIPSLVPIHGF 446
E L V+ H+ VLTEDG V ++G N + QLG+ N+P +
Sbjct: 224 EG--LNGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQLGIIPPPSSCNVPRQIQAKYL 281
Query: 447 LPRNI---ACGWWHTLL 460
R I A G +HT+L
Sbjct: 282 KGRTIIGVAAGRFHTVL 298
Score = 169 (64.5 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 46/140 (32%), Positives = 68/140 (48%)
Query: 290 YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAG 349
Y+K++ HS ++ G + T G G G+ GHG L P L Q+AA
Sbjct: 178 YIKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAA 237
Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGARHSA 408
HTV ++ +G VY FG N F QLG + NVP+ ++ L+ + V+ G H+
Sbjct: 238 KDHTVVLTEDGCVYTFGLNIFHQLGIIPPPSSCNVPRQIQAKYLKGRTIIGVAAGRFHTV 297
Query: 409 VLTEDGQVLSWGWNKYGQLG 428
+ T + V + G N GQLG
Sbjct: 298 LWTREA-VYTMGLNG-GQLG 315
Score = 39 (18.8 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 6/10 (60%), Positives = 8/10 (80%)
Query: 120 TEAGEVYTWG 129
T+ +VYTWG
Sbjct: 139 TDPTDVYTWG 148
>UNIPROTKB|Q9P2D0 [details] [associations]
symbol:IBTK "Inhibitor of Bruton tyrosine kinase"
species:9606 "Homo sapiens" [GO:0016020 "membrane" evidence=IEA]
[GO:0001933 "negative regulation of protein phosphorylation"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0019901
"protein kinase binding" evidence=IDA] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=IDA] [GO:0051209
"release of sequestered calcium ion into cytosol" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=IDA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0019901
GO:GO:0016020 Pathway_Interaction_DB:bcr_5pathway GO:GO:0051209
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GO:GO:0030292 EMBL:DQ005633 EMBL:DQ005634
EMBL:DQ005635 EMBL:AB037838 EMBL:AL050333 EMBL:BC027490
EMBL:BC038244 EMBL:BC042171 EMBL:BC113696 EMBL:BC113698
EMBL:AL050018 EMBL:AF235049 IPI:IPI00792333 IPI:IPI00829736
IPI:IPI00910313 PIR:T08705 RefSeq:NP_056340.2 UniGene:Hs.306425
ProteinModelPortal:Q9P2D0 SMR:Q9P2D0 IntAct:Q9P2D0 MINT:MINT-215747
STRING:Q9P2D0 PhosphoSite:Q9P2D0 DMDM:134034141 PaxDb:Q9P2D0
PRIDE:Q9P2D0 DNASU:25998 Ensembl:ENST00000306270 GeneID:25998
KEGG:hsa:25998 UCSC:uc003pjl.1 UCSC:uc003pjm.2 CTD:25998
GeneCards:GC06M082879 HGNC:HGNC:17853 HPA:HPA023826 MIM:606457
neXtProt:NX_Q9P2D0 PharmGKB:PA134898277 HOVERGEN:HBG081779
InParanoid:Q9P2D0 OMA:VSALHHK OrthoDB:EOG4J6RQ1 ChiTaRS:IBTK
GenomeRNAi:25998 NextBio:47714 ArrayExpress:Q9P2D0 Bgee:Q9P2D0
Genevestigator:Q9P2D0 Uniprot:Q9P2D0
Length = 1353
Score = 180 (68.4 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 62/197 (31%), Positives = 94/197 (47%)
Query: 274 LVRQG-SVNSSGKAGRSYVKEIACGGRHSAVV---TDAGALLTFGWGLYGQCGHGSTNDQ 329
L++ G S+ K G S + ++ R + VV TD + T+G GHGS N +
Sbjct: 105 LLKHGVSLYIQDKEGLSAL-DLVMKDRPTHVVFKNTDPTDVYTWGDNTNFTLGHGSQNSK 163
Query: 330 LRPSYAS--SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL 387
P S I ++Q+ +H+V +S +G+VY G G+LG G +Q VP+L+
Sbjct: 164 HHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCLVPRLV 223
Query: 388 ETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL-GDSIDRNIPSLVPIHGF 446
E L V+ H+ VLTEDG V ++G N + QLG+ N+P +
Sbjct: 224 EG--LNGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQLGIIPPPSSCNVPRQIQAKYL 281
Query: 447 LPRNI---ACGWWHTLL 460
R I A G +HT+L
Sbjct: 282 KGRTIIGVAAGRFHTVL 298
Score = 169 (64.5 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 46/140 (32%), Positives = 68/140 (48%)
Query: 290 YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAG 349
Y+K++ HS ++ G + T G G G+ GHG L P L Q+AA
Sbjct: 178 YIKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAA 237
Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGARHSA 408
HTV ++ +G VY FG N F QLG + NVP+ ++ L+ + V+ G H+
Sbjct: 238 KDHTVVLTEDGCVYTFGLNIFHQLGIIPPPSSCNVPRQIQAKYLKGRTIIGVAAGRFHTV 297
Query: 409 VLTEDGQVLSWGWNKYGQLG 428
+ T + V + G N GQLG
Sbjct: 298 LWTREA-VYTMGLNG-GQLG 315
Score = 39 (18.8 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 6/10 (60%), Positives = 8/10 (80%)
Query: 120 TEAGEVYTWG 129
T+ +VYTWG
Sbjct: 139 TDPTDVYTWG 148
>UNIPROTKB|E9PMV6 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058
EMBL:AC124078 IPI:IPI00976302 ProteinModelPortal:E9PMV6 SMR:E9PMV6
Ensembl:ENST00000529728 ArrayExpress:E9PMV6 Bgee:E9PMV6
Uniprot:E9PMV6
Length = 229
Score = 161 (61.7 bits), Expect = 4.2e-10, P = 4.2e-10
Identities = 44/143 (30%), Positives = 67/143 (46%)
Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGH----GSTNDQL----RPSYASSLMDIQVEQ 345
IA G RH+ T +G + +G GL CG G T PS + L + +
Sbjct: 44 IAAGLRHAVAATASGIVFQWGTGL-ASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMC 102
Query: 346 IAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGAR 405
+ AG H+ ++ G VYV+G N+ GQL VP+ +E ++++ + G
Sbjct: 103 VLAGSDHSASLTDAGEVYVWGSNKHGQLANEAAFLP-VPQKIEAHCFQNEKVTAIWSGWT 161
Query: 406 HSAVLTEDGQVLSWGWNKYGQLG 428
H TE G++ +WG YGQLG
Sbjct: 162 HLVAQTETGKMFTWGRADYGQLG 184
Score = 160 (61.4 bits), Expect = 6.5e-10, P = 6.5e-10
Identities = 53/173 (30%), Positives = 80/173 (46%)
Query: 303 VVTDAGALLTFGWGLYGQCG--HGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEG 360
++T+ G +L+ G +GQ G HG + P A L +V IAAGL H V + G
Sbjct: 1 MLTENGQVLSCGSNSFGQLGVPHGPRRCVV-PQ-AIELHKEKVVCIAAGLRHAVAATASG 58
Query: 361 RVYVFGGNQFGQLGTGVDQAENVPKLL--ETPI----LESKRAKVVSCGARHSAVLTEDG 414
V+ +G G + + +P + P LE+ +A V G+ HSA LT+ G
Sbjct: 59 IVFQWGTG-LASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAG 117
Query: 415 QVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIAC---GWWHTLLLAET 464
+V WG NK+GQL ++ +P + H F + GW H + ET
Sbjct: 118 EVYVWGSNKHGQLA-NEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTET 169
Score = 90 (36.7 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 30/125 (24%), Positives = 51/125 (40%)
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
L C G+ PL + S + G HSA +TDAG + +G
Sbjct: 67 LASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNK 126
Query: 318 YGQCGHGSTNDQLRPSY-ASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG 376
+GQ + + + A + +V I +G H V + G+++ +G +GQLG
Sbjct: 127 HGQLANEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLGRK 186
Query: 377 VDQAE 381
++ E
Sbjct: 187 LETYE 191
Score = 77 (32.2 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 67 SESGKLITWGSADDEGQSYLTSG-KHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEV 125
+E+G++++ GS + GQ + G + P+ L E VV AAG H V+ T +G V
Sbjct: 3 TENGQVLSCGS-NSFGQLGVPHGPRRCVVPQAIELHKE-KVVCIAAGLRHAVAATASGIV 60
Query: 126 YTWG 129
+ WG
Sbjct: 61 FQWG 64
>UNIPROTKB|E1BH40 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051493 "regulation of cytoskeleton organization"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0032880 "regulation of protein localization"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0021952 "central
nervous system projection neuron axonogenesis" evidence=IEA]
[GO:0021785 "branchiomotor neuron axon guidance" evidence=IEA]
[GO:0015630 "microtubule cytoskeleton" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] InterPro:IPR001841
InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0015630 GO:GO:0046872 GO:GO:0030424
GO:GO:0008270 GO:GO:0032880 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0021952 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 KO:K10693
PANTHER:PTHR12846 CTD:23077 GO:GO:0021785 OMA:LLSILHW
EMBL:DAAA02033607 EMBL:DAAA02033608 EMBL:DAAA02033609
EMBL:DAAA02033610 IPI:IPI00705654 RefSeq:NP_001179746.1
UniGene:Bt.105085 Ensembl:ENSBTAT00000025100 GeneID:534496
KEGG:bta:534496 NextBio:20876421 Uniprot:E1BH40
Length = 4640
Score = 163 (62.4 bits), Expect = 4.3e-10, Sum P(2) = 4.3e-10
Identities = 38/119 (31%), Positives = 63/119 (52%)
Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWH 352
+++CG HS V+ + G + TFG+G +GQ GHG N + P+ +L Q+ AG H
Sbjct: 906 QVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPST-QVTAGSNH 964
Query: 353 TVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLT 411
T + ++G+V+ FG GQLG P +L+ P +K A + + G+++ T
Sbjct: 965 TAALLMDGQVFTFGSFSKGQLGR--------P-ILDVPYWNAKPAPMPNIGSKYGRKAT 1014
Score = 137 (53.3 bits), Expect = 3.9e-09, Sum P(3) = 3.9e-09
Identities = 32/89 (35%), Positives = 48/89 (53%)
Query: 340 DIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKV 399
+++ Q++ G H+V + G VY FG Q GQLG G + P L++ L +V
Sbjct: 901 ELRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQA--LPGPSTQV 958
Query: 400 VSCGARHSAVLTEDGQVLSWGWNKYGQLG 428
+ G+ H+A L DGQV ++G GQLG
Sbjct: 959 TA-GSNHTAALLMDGQVFTFGSFSKGQLG 986
Score = 122 (48.0 bits), Expect = 1.6e-07, Sum P(3) = 1.6e-07
Identities = 29/72 (40%), Positives = 38/72 (52%)
Query: 396 RAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGW 455
RA VSCG HS VL E+G V ++G+ ++GQLG GD R P+LV + G
Sbjct: 903 RAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQVTAGS 962
Query: 456 WHTLLLAETTQI 467
HT L Q+
Sbjct: 963 NHTAALLMDGQV 974
Score = 77 (32.2 bits), Expect = 4.3e-10, Sum P(2) = 4.3e-10
Identities = 48/185 (25%), Positives = 71/185 (38%)
Query: 48 GGDSWKDVCGGGCGFALATSESGKLITWGSADDEG--QSYLTSGKHGETPEPFPLPTEAS 105
G D V G G FAL + +GK+ G G Q ++GK E P+
Sbjct: 488 GFDEESAVLGAGREFALMKTANGKIYYTGKYQSLGIKQGGPSAGKWVE----LPITKSPK 543
Query: 106 VVKAAAGW--AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE 163
+V + G +H + V E G ++ G SA D S S ++ K P +
Sbjct: 544 IVHFSVGHDGSHALLVAEDGSIFFTG------SASKGEDGESTKSRRQSKPYK----PKK 593
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASG-DEFFTLSPCLVTLNPGVKITKVAAGGR 222
K +S ++ E G D ++ S LVT G +T+VA G
Sbjct: 594 IIKMEGKIVVYTACNNGSSSVISKDGELYMFGKDAIYSDSSSLVTDLKGHFVTQVAMGKA 653
Query: 223 HTLIL 227
HT +L
Sbjct: 654 HTCVL 658
Score = 67 (28.6 bits), Expect = 3.9e-09, Sum P(3) = 3.9e-09
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 290 YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGH--GSTN 327
+V ++A G H+ V+ G + TFG GQCG G+ N
Sbjct: 644 FVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGRDTGAMN 683
Score = 50 (22.7 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 16/52 (30%), Positives = 26/52 (50%)
Query: 81 EGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGWAHCVSVTEAGEVYTWG 129
+G+ Y+ GK + L T+ V + A G AH + + GEV+T+G
Sbjct: 618 DGELYMF-GKDAIYSDSSSLVTDLKGHFVTQVAMGKAHTCVLMKNGEVWTFG 668
>UNIPROTKB|F1SI31 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051036 "regulation of endosome size" evidence=IEA]
[GO:0048812 "neuron projection morphogenesis" evidence=IEA]
[GO:0043539 "protein serine/threonine kinase activator activity"
evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=IEA] [GO:0032313 "regulation of Rab GTPase activity"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0030676 "Rac
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0030027 "lamellipodium" evidence=IEA] [GO:0017137 "Rab GTPase
binding" evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0016197 "endosomal transport"
evidence=IEA] [GO:0016050 "vesicle organization" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0008104
"protein localization" evidence=IEA] [GO:0007626 "locomotory
behavior" evidence=IEA] [GO:0007528 "neuromuscular junction
development" evidence=IEA] [GO:0006979 "response to oxidative
stress" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005769 "early endosome"
evidence=IEA] [GO:0001881 "receptor recycling" evidence=IEA]
[GO:0001726 "ruffle" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0005543 "phospholipid binding"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408
Pfam:PF00415 Pfam:PF02204 GO:GO:0005829 GO:GO:0005813 GO:GO:0043234
GO:GO:0014069 GO:GO:0008104 GO:GO:0006979 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0016197
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
GeneTree:ENSGT00600000084242 OMA:AKPAIDF GO:GO:0005769
GO:GO:0017112 GO:GO:0030676 GO:GO:0001662 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
Ensembl:ENSSSCT00000017539 Uniprot:F1SI31
Length = 1644
Score = 136 (52.9 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 52/193 (26%), Positives = 86/193 (44%)
Query: 284 GKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPS---YASSLMD 340
G G++ V + A G +H ++T+ G + +FG S +L PS ++L+
Sbjct: 37 GWTGKT-VLQAALGVKHGVLLTEDGEVYSFG-----TLPWRSEPAELCPSSPILENALVG 90
Query: 341 IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL-----ETPILESK 395
V +A G +H+ ++ G VY++G N GQ Q P + ET L +
Sbjct: 91 QYVVTVATGSFHSGAVTESGVVYMWGENSAGQCAVANQQYVPEPNPVSISDSETSPLLAV 150
Query: 396 RAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-----IHGFLPRN 450
R ++CG H+ L+ ++ W W QLGL I P P + G +
Sbjct: 151 RILQLACGEEHTLALSISREI--WAWGTGCQLGL---ITTTFPVTKPQKVEHLAGRVVLQ 205
Query: 451 IACGWWHTLLLAE 463
+ACG +H+L L +
Sbjct: 206 VACGAFHSLALVQ 218
Score = 127 (49.8 bits), Expect = 5.0e-10, Sum P(2) = 5.0e-10
Identities = 37/107 (34%), Positives = 56/107 (52%)
Query: 312 TFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
T+G G GQ GHG +L+P L +V + AG +H++ ++ + +VY +G N FG
Sbjct: 524 TWGKGKDGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSNTFG 583
Query: 372 QLGTGVDQAENVPKLLETPILESKRAK-VVSCGARHSAVL--TEDGQ 415
QLG D VP+L + + S+ V+ G +S L TED Q
Sbjct: 584 QLGHS-DFPTTVPRLAK---MNSENGVWSVAAGQDYSLFLVDTEDFQ 626
Score = 117 (46.2 bits), Expect = 6.1e-09, Sum P(2) = 6.1e-09
Identities = 36/111 (32%), Positives = 54/111 (48%)
Query: 357 SVEGRVYVFGGNQFGQLGTGVDQAENVPKL--LETPILESKRAKVVSCGARHSAVLTEDG 414
S+ V+ +G + GQLG G + +P+L L L+ K + G HS LT
Sbjct: 517 SLRTEVWTWGKGKDGQLGHG----DVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKS 572
Query: 415 QVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR-NIACGWWHTLLLAET 464
QV SWG N +GQLG D +P L ++ ++A G ++L L +T
Sbjct: 573 QVYSWGSNTFGQLGHSD-FPTTVPRLAKMNSENGVWSVAAGQDYSLFLVDT 622
Score = 105 (42.0 bits), Expect = 5.0e-10, Sum P(2) = 5.0e-10
Identities = 49/151 (32%), Positives = 69/151 (45%)
Query: 88 SGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG---WR----ECVPSAKVT 140
+G TPE P T +V++AA G H V +TE GEVY++G WR E PS+ +
Sbjct: 25 AGSCSVTPERLPGWTGKTVLQAALGVKHGVLLTEDGEVYSFGTLPWRSEPAELCPSSPIL 84
Query: 141 RDFGSAGSFQKD-STGK-QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE-NPASGDE 197
+ G + +TG S TE GE + ++ + E NP S +
Sbjct: 85 EN-ALVGQYVVTVATGSFHSGAVTESGVVY--MWGENSAGQCAVANQQYVPEPNPVSISD 141
Query: 198 FFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
T SP L V+I ++A G HTL LS
Sbjct: 142 SET-SPLLA-----VRILQLACGEEHTLALS 166
Score = 82 (33.9 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 31/116 (26%), Positives = 52/116 (44%)
Query: 22 VYMWGYLPGTS-PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADD 80
VY +G LP S P + SPI G V G A +ESG + WG +
Sbjct: 62 VYSFGTLPWRSEPAELCPSSPILENALVGQYVVTVATGSFHSG-AVTESGVVYMWGE-NS 119
Query: 81 EGQSYLTSGKHGETPEPFPLP-TEAS------VVKAAAGWAHCVSVTEAGEVYTWG 129
GQ + + ++ P P + +E S +++ A G H ++++ + E++ WG
Sbjct: 120 AGQCAVANQQYVPEPNPVSISDSETSPLLAVRILQLACGEEHTLALSISREIWAWG 175
>UNIPROTKB|F1RP77 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051493 "regulation of cytoskeleton organization"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0032880 "regulation of protein localization"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0021952 "central
nervous system projection neuron axonogenesis" evidence=IEA]
[GO:0021785 "branchiomotor neuron axon guidance" evidence=IEA]
[GO:0015630 "microtubule cytoskeleton" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] InterPro:IPR001841
InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0015630 GO:GO:0046872 GO:GO:0030424
GO:GO:0008270 GO:GO:0032880 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0021952 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 PANTHER:PTHR12846
GO:GO:0021785 OMA:LLSILHW EMBL:CU457401 EMBL:CT978653 EMBL:CU041349
Ensembl:ENSSSCT00000010386 Uniprot:F1RP77
Length = 4460
Score = 162 (62.1 bits), Expect = 5.1e-10, Sum P(2) = 5.1e-10
Identities = 38/119 (31%), Positives = 63/119 (52%)
Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWH 352
+++CG HS V+ + G + TFG+G +GQ GHG N + P+ +L Q+ AG H
Sbjct: 819 QVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPST-QVTAGSNH 877
Query: 353 TVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLT 411
T + ++G+V+ FG GQLG P +L+ P +K A + + G+++ T
Sbjct: 878 TAVLLMDGQVFTFGSFSKGQLGR--------P-ILDVPYWNAKPAPMPNIGSKYGRKAT 927
Score = 141 (54.7 bits), Expect = 1.3e-09, Sum P(3) = 1.3e-09
Identities = 33/89 (37%), Positives = 49/89 (55%)
Query: 340 DIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKV 399
+++ Q++ G H+V + G VY FG Q GQLG G + P L++ L +V
Sbjct: 814 ELRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQA--LPGPSTQV 871
Query: 400 VSCGARHSAVLTEDGQVLSWGWNKYGQLG 428
+ G+ H+AVL DGQV ++G GQLG
Sbjct: 872 TA-GSNHTAVLLMDGQVFTFGSFSKGQLG 899
Score = 124 (48.7 bits), Expect = 8.6e-08, Sum P(3) = 8.6e-08
Identities = 29/72 (40%), Positives = 39/72 (54%)
Query: 396 RAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGW 455
RA VSCG HS VL E+G V ++G+ ++GQLG GD R P+LV + G
Sbjct: 816 RAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQVTAGS 875
Query: 456 WHTLLLAETTQI 467
HT +L Q+
Sbjct: 876 NHTAVLLMDGQV 887
Score = 77 (32.2 bits), Expect = 5.1e-10, Sum P(2) = 5.1e-10
Identities = 48/185 (25%), Positives = 71/185 (38%)
Query: 48 GGDSWKDVCGGGCGFALATSESGKLITWGSADDEG--QSYLTSGKHGETPEPFPLPTEAS 105
G D V G G FAL + +GK+ G G Q ++GK E P+
Sbjct: 401 GFDEESAVLGAGREFALMKTANGKIYYTGKYQSLGIKQGGPSAGKWVE----LPITKSPK 456
Query: 106 VVKAAAGW--AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE 163
+V + G +H + V E G ++ G SA D S S ++ K P +
Sbjct: 457 IVHFSVGHDGSHALLVAEDGSIFFTG------SASKGEDGESTKSRRQSKPYK----PKK 506
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASG-DEFFTLSPCLVTLNPGVKITKVAAGGR 222
K +S ++ E G D ++ S LVT G +T+VA G
Sbjct: 507 IIKMEGKIVVYTACNNGSSSVISKDGELYMFGKDAIYSDSSSLVTDLKGHFVTQVAMGKA 566
Query: 223 HTLIL 227
HT +L
Sbjct: 567 HTCVL 571
Score = 67 (28.6 bits), Expect = 1.3e-09, Sum P(3) = 1.3e-09
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 290 YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGH--GSTN 327
+V ++A G H+ V+ G + TFG GQCG G+ N
Sbjct: 557 FVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGRDTGAMN 596
Score = 50 (22.7 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 16/52 (30%), Positives = 26/52 (50%)
Query: 81 EGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGWAHCVSVTEAGEVYTWG 129
+G+ Y+ GK + L T+ V + A G AH + + GEV+T+G
Sbjct: 531 DGELYMF-GKDAIYSDSSSLVTDLKGHFVTQVAMGKAHTCVLMKNGEVWTFG 581
>RGD|1311697 [details] [associations]
symbol:Ibtk "inhibitor of Bruton agammaglobulinemia tyrosine
kinase" species:10116 "Rattus norvegicus" [GO:0001933 "negative
regulation of protein phosphorylation" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0030292
"protein tyrosine kinase inhibitor activity" evidence=ISO]
[GO:0051209 "release of sequestered calcium ion into cytosol"
evidence=ISO] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 GO:GO:0051209 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GO:GO:0030292 OrthoDB:EOG4J6RQ1
GeneTree:ENSGT00700000104160 IPI:IPI00370548
Ensembl:ENSRNOT00000056930 ArrayExpress:D3ZH46 Uniprot:D3ZH46
Length = 1352
Score = 179 (68.1 bits), Expect = 5.1e-10, P = 5.1e-10
Identities = 60/201 (29%), Positives = 94/201 (46%)
Query: 274 LVRQG-SVNSSGKAGRSYVKEIACGGRHSAVV---TDAGALLTFGWGLYGQCGHGSTNDQ 329
L++ G S+ K G S + ++ R + VV TD + T+G GHGS N +
Sbjct: 105 LLKHGVSLYMQDKEGLSPL-DLLMKDRPAHVVFKNTDPTEVYTWGDNTNFTLGHGSQNSK 163
Query: 330 LRPSYAS--SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL 387
P S + V+Q+ +H+V +S +G+VY G + G+LG G +Q VP+L+
Sbjct: 164 HHPELLDLFSRSRVYVKQVVLCKFHSVFLSQQGQVYTCGHGRGGRLGHGDEQTCLVPRLV 223
Query: 388 ETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL-GDSIDRNIPSLVPIHGF 446
E L V+ H+ VLTEDG V ++G N + QLG+ N+P + +
Sbjct: 224 EG--LSGHSCSQVAAAKDHTVVLTEDGCVYTFGLNTFHQLGIIPPPSSCNVPRQLTVRMK 281
Query: 447 LPRNIAC--GW--WHTLLLAE 463
+ C W W L +E
Sbjct: 282 KGHTVVCRKAWRFWQVLWTSE 302
Score = 154 (59.3 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 49/145 (33%), Positives = 64/145 (44%)
Query: 288 RSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA 347
R YVK++ HS ++ G + T G G G+ GHG L P L Q+A
Sbjct: 176 RVYVKQVVLCKFHSVFLSQQGQVYTCGHGRGGRLGHGDEQTCLVPRLVEGLSGHSCSQVA 235
Query: 348 AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGA-- 404
A HTV ++ +G VY FG N F QLG + NVP+ L + K+ V C
Sbjct: 236 AAKDHTVVLTEDGCVYTFGLNTFHQLGIIPPPSSCNVPRQLT---VRMKKGHTVVCRKAW 292
Query: 405 RHSAVLTEDGQVLSWGWNKYGQLGL 429
R VL L G N G LG+
Sbjct: 293 RFWQVLWTSEDFLVLGLNS-GHLGI 316
Score = 45 (20.9 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 10/17 (58%), Positives = 11/17 (64%)
Query: 114 AHCV-SVTEAGEVYTWG 129
AH V T+ EVYTWG
Sbjct: 132 AHVVFKNTDPTEVYTWG 148
>UNIPROTKB|F1NZF2 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0015630 "microtubule cytoskeleton" evidence=IEA] [GO:0021785
"branchiomotor neuron axon guidance" evidence=IEA] [GO:0021952
"central nervous system projection neuron axonogenesis"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0032880
"regulation of protein localization" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0051493
"regulation of cytoskeleton organization" evidence=IEA]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0015630 GO:GO:0046872 GO:GO:0030424
GO:GO:0008270 GO:GO:0032880 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633 PROSITE:PS50012
InterPro:IPR004939 PROSITE:PS51284 InterPro:IPR012983 Pfam:PF08005
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194
GeneTree:ENSGT00390000011403 PANTHER:PTHR12846 OMA:LLSILHW
EMBL:AC149787 EMBL:AADN02042674 IPI:IPI00599046
Ensembl:ENSGALT00000027346 Uniprot:F1NZF2
Length = 4580
Score = 160 (61.4 bits), Expect = 5.5e-10, Sum P(2) = 5.5e-10
Identities = 37/119 (31%), Positives = 63/119 (52%)
Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWH 352
+++CG HS ++ + G + TFG+G +GQ GHG N + P+ +L Q+ AG H
Sbjct: 844 QVSCGFHHSVILMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPST-QVTAGSNH 902
Query: 353 TVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLT 411
T + ++G+V+ FG GQLG P +L+ P +K A + + G+++ T
Sbjct: 903 TAILLMDGQVFTFGSFSKGQLGR--------P-ILDMPYWNAKPAPMPNIGSKYGRKAT 952
Score = 140 (54.3 bits), Expect = 8.1e-08, Sum P(2) = 8.1e-08
Identities = 32/89 (35%), Positives = 49/89 (55%)
Query: 340 DIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKV 399
+++ Q++ G H+V + G VY FG Q GQLG G + P L++ L +V
Sbjct: 839 ELRAVQVSCGFHHSVILMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQA--LPGPSTQV 896
Query: 400 VSCGARHSAVLTEDGQVLSWGWNKYGQLG 428
+ G+ H+A+L DGQV ++G GQLG
Sbjct: 897 TA-GSNHTAILLMDGQVFTFGSFSKGQLG 924
Score = 124 (48.7 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 28/72 (38%), Positives = 39/72 (54%)
Query: 396 RAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGW 455
RA VSCG HS +L E+G V ++G+ ++GQLG GD R P+LV + G
Sbjct: 841 RAVQVSCGFHHSVILMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQVTAGS 900
Query: 456 WHTLLLAETTQI 467
HT +L Q+
Sbjct: 901 NHTAILLMDGQV 912
Score = 79 (32.9 bits), Expect = 5.5e-10, Sum P(2) = 5.5e-10
Identities = 47/185 (25%), Positives = 72/185 (38%)
Query: 48 GGDSWKDVCGGGCGFALATSESGKLITWGSADDEG--QSYLTSGKHGETPEPFPLPTEAS 105
G D V G G FAL + SGK+ G G Q ++GK E P+
Sbjct: 426 GFDEESAVLGAGREFALMKTASGKIYYTGKYQSLGIKQGGPSAGKWVE----LPITKSPK 481
Query: 106 VVKAAAGW--AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE 163
+++ + G +H + V + G ++ G SA D S S ++ K P +
Sbjct: 482 IIQFSVGHDGSHALLVADDGSIFFTG------SASKGEDGESTKSRRQSKPYK----PKK 531
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASG-DEFFTLSPCLVTLNPGVKITKVAAGGR 222
K +S ++ E G D ++ S LVT G +T+VA G
Sbjct: 532 IIKMEGKIVISTACNNGSSSVISKDGELYMFGKDAIYSDSTSLVTDLKGHFVTQVAMGKA 591
Query: 223 HTLIL 227
HT +L
Sbjct: 592 HTCVL 596
Score = 51 (23.0 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 20/68 (29%), Positives = 31/68 (45%)
Query: 81 EGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSA 137
+G+ Y+ GK + L T+ V + A G AH + + GEV+T+G
Sbjct: 556 DGELYMF-GKDAIYSDSTSLVTDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNN---KG 611
Query: 138 KVTRDFGS 145
+ RD GS
Sbjct: 612 QCGRDTGS 619
>UNIPROTKB|O75592 [details] [associations]
symbol:MYCBP2 "Probable E3 ubiquitin-protein ligase MYCBP2"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0015630 "microtubule cytoskeleton"
evidence=IEA] [GO:0021785 "branchiomotor neuron axon guidance"
evidence=IEA] [GO:0021952 "central nervous system projection neuron
axonogenesis" evidence=IEA] [GO:0030424 "axon" evidence=IEA]
[GO:0032880 "regulation of protein localization" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0051493 "regulation of cytoskeleton organization" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001841
InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415
Prosite:PS00518 GO:GO:0005634 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0015630 GO:GO:0006355 GO:GO:0046872 GO:GO:0016874
GO:GO:0030424 GO:GO:0008270 GO:GO:0032880 GO:GO:0006351
GO:GO:0016567 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0021952 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 CleanEx:HS_PAM InterPro:IPR004939
PROSITE:PS51284 InterPro:IPR012983 Pfam:PF08005 EMBL:AC001226
InterPro:IPR017868 EMBL:CH471093 PROSITE:PS50194 KO:K10693
PANTHER:PTHR12846 EMBL:AF075587 EMBL:AL159154 EMBL:AL159158
EMBL:AL359257 EMBL:AB020723 EMBL:BC037971 EMBL:AF083244
IPI:IPI00289776 IPI:IPI01014189 RefSeq:NP_055872.4
UniGene:Hs.591221 ProteinModelPortal:O75592 SMR:O75592
DIP:DIP-28142N IntAct:O75592 MINT:MINT-1632199 STRING:O75592
PhosphoSite:O75592 PaxDb:O75592 PRIDE:O75592
Ensembl:ENST00000357337 Ensembl:ENST00000544440 GeneID:23077
KEGG:hsa:23077 UCSC:uc010aev.3 CTD:23077 GeneCards:GC13M077618
HGNC:HGNC:23386 HPA:HPA039945 MIM:610392 neXtProt:NX_O75592
PharmGKB:PA134871126 eggNOG:NOG240798 HOVERGEN:HBG053153
InParanoid:O75592 OrthoDB:EOG4VQ9NB ChiTaRS:MYCBP2 GenomeRNAi:23077
NextBio:44191 ArrayExpress:O75592 Bgee:O75592 CleanEx:HS_MYCBP2
Genevestigator:O75592 GermOnline:ENSG00000005810 GO:GO:0021785
Uniprot:O75592
Length = 4640
Score = 162 (62.1 bits), Expect = 7.0e-10, Sum P(2) = 7.0e-10
Identities = 38/119 (31%), Positives = 63/119 (52%)
Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWH 352
+++CG HS V+ + G + TFG+G +GQ GHG N + P+ +L Q+ AG H
Sbjct: 906 QVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPST-QVTAGSNH 964
Query: 353 TVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLT 411
T + ++G+V+ FG GQLG P +L+ P +K A + + G+++ T
Sbjct: 965 TAVLLMDGQVFTFGSFSKGQLGR--------P-ILDVPYWNAKPAPMPNIGSKYGRKAT 1014
Score = 141 (54.7 bits), Expect = 1.8e-09, Sum P(3) = 1.8e-09
Identities = 33/89 (37%), Positives = 49/89 (55%)
Query: 340 DIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKV 399
+++ Q++ G H+V + G VY FG Q GQLG G + P L++ L +V
Sbjct: 901 ELRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQA--LPGPSTQV 958
Query: 400 VSCGARHSAVLTEDGQVLSWGWNKYGQLG 428
+ G+ H+AVL DGQV ++G GQLG
Sbjct: 959 TA-GSNHTAVLLMDGQVFTFGSFSKGQLG 986
Score = 124 (48.7 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
Identities = 29/72 (40%), Positives = 39/72 (54%)
Query: 396 RAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGW 455
RA VSCG HS VL E+G V ++G+ ++GQLG GD R P+LV + G
Sbjct: 903 RAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQVTAGS 962
Query: 456 WHTLLLAETTQI 467
HT +L Q+
Sbjct: 963 NHTAVLLMDGQV 974
Score = 76 (31.8 bits), Expect = 7.0e-10, Sum P(2) = 7.0e-10
Identities = 47/185 (25%), Positives = 71/185 (38%)
Query: 48 GGDSWKDVCGGGCGFALATSESGKLITWGSADDEG--QSYLTSGKHGETPEPFPLPTEAS 105
G D + G G FAL + +GK+ G G Q ++GK E P+
Sbjct: 488 GFDEESAILGAGREFALMKTANGKIYYTGKYQSLGIKQGGPSAGKWVE----LPITKSPK 543
Query: 106 VVKAAAGW--AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE 163
+V + G +H + V E G ++ G SA D S S ++ K P +
Sbjct: 544 IVHFSVGHDGSHALLVAEDGSIFFTG------SASKGEDGESTKSRRQSKPYK----PKK 593
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASG-DEFFTLSPCLVTLNPGVKITKVAAGGR 222
K +S ++ E G D ++ S LVT G +T+VA G
Sbjct: 594 IIKMEGKIVVYTACNNGSSSVISKDGELYMFGKDAIYSDSSSLVTDLKGHFVTQVAMGKA 653
Query: 223 HTLIL 227
HT +L
Sbjct: 654 HTCVL 658
Score = 67 (28.6 bits), Expect = 1.8e-09, Sum P(3) = 1.8e-09
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 290 YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGH--GSTN 327
+V ++A G H+ V+ G + TFG GQCG G+ N
Sbjct: 644 FVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGRDTGAMN 683
Score = 50 (22.7 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 16/52 (30%), Positives = 26/52 (50%)
Query: 81 EGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGWAHCVSVTEAGEVYTWG 129
+G+ Y+ GK + L T+ V + A G AH + + GEV+T+G
Sbjct: 618 DGELYMF-GKDAIYSDSSSLVTDLKGHFVTQVAMGKAHTCVLMKNGEVWTFG 668
>UNIPROTKB|J3KPZ3 [details] [associations]
symbol:MYCBP2 "Probable E3 ubiquitin-protein ligase MYCBP2"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872 GO:GO:0008270
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.30.40.10 InterPro:IPR014756 InterPro:IPR013083
SUPFAM:SSF81296 InterPro:IPR008979 SUPFAM:SSF49785 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 EMBL:AC001226 InterPro:IPR017868
PROSITE:PS50194 KO:K10693 PANTHER:PTHR12846 EMBL:AL159154
EMBL:AL159158 EMBL:AL359257 RefSeq:NP_055872.4 UniGene:Hs.591221
GeneID:23077 KEGG:hsa:23077 CTD:23077 HGNC:HGNC:23386
ChiTaRS:MYCBP2 OMA:LLSILHW ProteinModelPortal:J3KPZ3
Ensembl:ENST00000407578 Uniprot:J3KPZ3
Length = 4678
Score = 162 (62.1 bits), Expect = 7.1e-10, Sum P(2) = 7.1e-10
Identities = 38/119 (31%), Positives = 63/119 (52%)
Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWH 352
+++CG HS V+ + G + TFG+G +GQ GHG N + P+ +L Q+ AG H
Sbjct: 944 QVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPST-QVTAGSNH 1002
Query: 353 TVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLT 411
T + ++G+V+ FG GQLG P +L+ P +K A + + G+++ T
Sbjct: 1003 TAVLLMDGQVFTFGSFSKGQLGR--------P-ILDVPYWNAKPAPMPNIGSKYGRKAT 1052
Score = 141 (54.7 bits), Expect = 1.9e-09, Sum P(3) = 1.9e-09
Identities = 33/89 (37%), Positives = 49/89 (55%)
Query: 340 DIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKV 399
+++ Q++ G H+V + G VY FG Q GQLG G + P L++ L +V
Sbjct: 939 ELRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQA--LPGPSTQV 996
Query: 400 VSCGARHSAVLTEDGQVLSWGWNKYGQLG 428
+ G+ H+AVL DGQV ++G GQLG
Sbjct: 997 TA-GSNHTAVLLMDGQVFTFGSFSKGQLG 1024
Score = 124 (48.7 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
Identities = 29/72 (40%), Positives = 39/72 (54%)
Query: 396 RAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGW 455
RA VSCG HS VL E+G V ++G+ ++GQLG GD R P+LV + G
Sbjct: 941 RAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQVTAGS 1000
Query: 456 WHTLLLAETTQI 467
HT +L Q+
Sbjct: 1001 NHTAVLLMDGQV 1012
Score = 76 (31.8 bits), Expect = 7.1e-10, Sum P(2) = 7.1e-10
Identities = 47/185 (25%), Positives = 71/185 (38%)
Query: 48 GGDSWKDVCGGGCGFALATSESGKLITWGSADDEG--QSYLTSGKHGETPEPFPLPTEAS 105
G D + G G FAL + +GK+ G G Q ++GK E P+
Sbjct: 526 GFDEESAILGAGREFALMKTANGKIYYTGKYQSLGIKQGGPSAGKWVE----LPITKSPK 581
Query: 106 VVKAAAGW--AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE 163
+V + G +H + V E G ++ G SA D S S ++ K P +
Sbjct: 582 IVHFSVGHDGSHALLVAEDGSIFFTG------SASKGEDGESTKSRRQSKPYK----PKK 631
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASG-DEFFTLSPCLVTLNPGVKITKVAAGGR 222
K +S ++ E G D ++ S LVT G +T+VA G
Sbjct: 632 IIKMEGKIVVYTACNNGSSSVISKDGELYMFGKDAIYSDSSSLVTDLKGHFVTQVAMGKA 691
Query: 223 HTLIL 227
HT +L
Sbjct: 692 HTCVL 696
Score = 67 (28.6 bits), Expect = 1.9e-09, Sum P(3) = 1.9e-09
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 290 YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGH--GSTN 327
+V ++A G H+ V+ G + TFG GQCG G+ N
Sbjct: 682 FVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGRDTGAMN 721
Score = 50 (22.7 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 16/52 (30%), Positives = 26/52 (50%)
Query: 81 EGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGWAHCVSVTEAGEVYTWG 129
+G+ Y+ GK + L T+ V + A G AH + + GEV+T+G
Sbjct: 656 DGELYMF-GKDAIYSDSSSLVTDLKGHFVTQVAMGKAHTCVLMKNGEVWTFG 706
>UNIPROTKB|F1RQL8 [details] [associations]
symbol:IBTK "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051209 "release of sequestered calcium ion into
cytosol" evidence=IEA] [GO:0030292 "protein tyrosine kinase
inhibitor activity" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0051209
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 GO:GO:0030292
OMA:VSALHHK GeneTree:ENSGT00700000104160 EMBL:CU392845
Ensembl:ENSSSCT00000004926 Uniprot:F1RQL8
Length = 1346
Score = 177 (67.4 bits), Expect = 8.4e-10, P = 8.4e-10
Identities = 61/197 (30%), Positives = 95/197 (48%)
Query: 274 LVRQG-SVNSSGKAGRSYVKEIACGGRHSAVV---TDAGALLTFGWGLYGQCGHGSTNDQ 329
L++ G S+ K G S + ++ R + VV TD + T+G GHGS N +
Sbjct: 105 LLKHGVSLYIQDKEGLSAL-DLLMKDRPTHVVFKNTDPTDVYTWGDNTNFTLGHGSQNSK 163
Query: 330 LRPSYAS--SLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL 387
P S + ++Q+ +H+V +S +G+VY G G+LG G +Q VP+L+
Sbjct: 164 HHPELVDLFSRSGVYIKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCLVPRLV 223
Query: 388 ETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL-GDSIDRNIPSLVPIHGF 446
E L V+ H+ VLTEDG V ++G N + QLG+ + N+P +
Sbjct: 224 EG--LSGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQLGIIPPPSNCNVPRQMQAKYL 281
Query: 447 LPRNI---ACGWWHTLL 460
R I A G +HT+L
Sbjct: 282 KGRTIIGVAAGRFHTVL 298
Score = 169 (64.5 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 46/140 (32%), Positives = 68/140 (48%)
Query: 290 YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAG 349
Y+K++ HS ++ G + T G G G+ GHG L P L Q+AA
Sbjct: 178 YIKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLSGHNCSQVAAA 237
Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGARHSA 408
HTV ++ +G VY FG N F QLG + NVP+ ++ L+ + V+ G H+
Sbjct: 238 KDHTVVLTEDGCVYTFGLNIFHQLGIIPPPSNCNVPRQMQAKYLKGRTIIGVAAGRFHTV 297
Query: 409 VLTEDGQVLSWGWNKYGQLG 428
+ T + V + G N GQLG
Sbjct: 298 LWTREA-VYTLGLNG-GQLG 315
Score = 39 (18.8 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 6/10 (60%), Positives = 8/10 (80%)
Query: 120 TEAGEVYTWG 129
T+ +VYTWG
Sbjct: 139 TDPTDVYTWG 148
>UNIPROTKB|D4A2D3 [details] [associations]
symbol:Mycbp2 "Protein Mycbp2" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 RGD:1312048 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0015630 GO:GO:0046872
GO:GO:0030424 GO:GO:0008270 GO:GO:0032880 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0021952 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 PANTHER:PTHR12846
OrthoDB:EOG4VQ9NB GO:GO:0021785 IPI:IPI00765932
ProteinModelPortal:D4A2D3 Ensembl:ENSRNOT00000014583
ArrayExpress:D4A2D3 Uniprot:D4A2D3
Length = 4715
Score = 162 (62.1 bits), Expect = 9.2e-10, Sum P(2) = 9.2e-10
Identities = 38/119 (31%), Positives = 63/119 (52%)
Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWH 352
+++CG HS V+ + G + TFG+G +GQ GHG N + P+ +L Q+ AG H
Sbjct: 906 QVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPST-QVTAGSNH 964
Query: 353 TVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLT 411
T + ++G+V+ FG GQLG P +L+ P +K A + + G+++ T
Sbjct: 965 TAVLVMDGQVFTFGSFSKGQLGR--------P-ILDVPYWNAKPAPMPNIGSKYGRKAT 1014
Score = 143 (55.4 bits), Expect = 1.5e-09, Sum P(3) = 1.5e-09
Identities = 33/89 (37%), Positives = 49/89 (55%)
Query: 340 DIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKV 399
+++ Q++ G H+V + G VY FG Q GQLG G + P L++ L +V
Sbjct: 901 EVRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQA--LPGPSTQV 958
Query: 400 VSCGARHSAVLTEDGQVLSWGWNKYGQLG 428
+ G+ H+AVL DGQV ++G GQLG
Sbjct: 959 TA-GSNHTAVLVMDGQVFTFGSFSKGQLG 986
Score = 125 (49.1 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 29/72 (40%), Positives = 39/72 (54%)
Query: 396 RAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGW 455
RA VSCG HS VL E+G V ++G+ ++GQLG GD R P+LV + G
Sbjct: 903 RAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQVTAGS 962
Query: 456 WHTLLLAETTQI 467
HT +L Q+
Sbjct: 963 NHTAVLVMDGQV 974
Score = 76 (31.8 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 26/81 (32%), Positives = 33/81 (40%)
Query: 295 ACGGRHSAVVTDAGALLTFGW-GLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
AC S+V++ G L FG +Y S S L V Q+A G HT
Sbjct: 606 ACNNGSSSVISKDGELYMFGKDAIYSDSS----------SLVSDLKGHFVTQVAMGKAHT 655
Query: 354 VCISVEGRVYVFGGNQFGQLG 374
+ G V+ FG N GQ G
Sbjct: 656 CVLMKNGEVWTFGVNNKGQCG 676
Score = 75 (31.5 bits), Expect = 9.2e-10, Sum P(2) = 9.2e-10
Identities = 48/185 (25%), Positives = 72/185 (38%)
Query: 48 GGDSWKDVCGGGCGFALATSESGKLITWGSADDEG--QSYLTSGKHGETPEPFPLPTEAS 105
G D + G G FAL + +GK+ G G Q ++GK E P+
Sbjct: 488 GFDEESAILGAGREFALMKTANGKIYYTGKYQSLGIKQGGPSAGKWVE----LPITKSPK 543
Query: 106 VVKAAAGW--AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE 163
+V + G +H + V E G V+ G SA D SA S ++ K P +
Sbjct: 544 IVHFSVGHDGSHALLVAEDGSVFFTG------SASKGEDGESAKSRRQSKPYK----PKK 593
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASG-DEFFTLSPCLVTLNPGVKITKVAAGGR 222
K +S ++ E G D ++ S LV+ G +T+VA G
Sbjct: 594 IIKMEGKIVVCTACNNGSSSVISKDGELYMFGKDAIYSDSSSLVSDLKGHFVTQVAMGKA 653
Query: 223 HTLIL 227
HT +L
Sbjct: 654 HTCVL 658
Score = 67 (28.6 bits), Expect = 1.5e-09, Sum P(3) = 1.5e-09
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 290 YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGH--GSTN 327
+V ++A G H+ V+ G + TFG GQCG G+ N
Sbjct: 644 FVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGRDTGAMN 683
Score = 47 (21.6 bits), Expect = 7.7e-05, Sum P(2) = 7.7e-05
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWG 129
V + A G AH + + GEV+T+G
Sbjct: 645 VTQVAMGKAHTCVLMKNGEVWTFG 668
>WB|WBGene00021461 [details] [associations]
symbol:nekl-1 species:6239 "Caenorhabditis elegans"
[GO:0004672 "protein kinase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] [GO:0004713 "protein tyrosine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 GO:GO:0005524 eggNOG:COG0515
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 EMBL:FO081209
KO:K08857 GeneTree:ENSGT00700000104137 RefSeq:NP_490968.2
ProteinModelPortal:Q6AW07 SMR:Q6AW07 EnsemblMetazoa:Y39G10AR.3
GeneID:189769 KEGG:cel:CELE_Y39G10AR.3 UCSC:Y39G10AR.3 CTD:189769
WormBase:Y39G10AR.3 HOGENOM:HOG000017263 InParanoid:Q6AW07
OMA:RNDNTEL NextBio:943564 Uniprot:Q6AW07
Length = 998
Score = 174 (66.3 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 45/143 (31%), Positives = 67/143 (46%)
Query: 288 RSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA 347
R +K++A H+ V+T+ L FG GQ G G + SL ++ +
Sbjct: 466 RISIKQVALSKTHTMVLTNDNELFGFGDNSCGQLGFGKFSKMENGRLVESLKGRDIQSVG 525
Query: 348 AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV-PKLLETPILESKRAKVVSCGARH 406
G + +V G + FG + LG G D ++ P LLE + E+ K + CG H
Sbjct: 526 VGNYFSVICCDRGTLLTFGTAK--NLGLGKDAKDSAKPMLLEQLLREN--IKDIYCGHDH 581
Query: 407 SAVLTEDGQVLSWGWNKYGQLGL 429
+ E G+ L WG N+YGQLGL
Sbjct: 582 VVAVLESGECLGWGSNQYGQLGL 604
Score = 129 (50.5 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 52/207 (25%), Positives = 92/207 (44%)
Query: 287 GRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGS-TNDQLRPSYASSLMDIQVEQ 345
GR ++ + G S + D G LLTFG G G D +P L+ ++
Sbjct: 518 GRD-IQSVGVGNYFSVICCDRGTLLTFGTAK--NLGLGKDAKDSAKPMLLEQLLRENIKD 574
Query: 346 IAAGLWHTVCISVEGRVYVFGGNQFGQLG----------TGV---DQAENVPKLLETPIL 392
I G H V + G +G NQ+GQLG T V ++A + + P+
Sbjct: 575 IYCGHDHVVAVLESGECLGWGSNQYGQLGLPTLEHFFAPTKVFFLNEATALYGPFQIPMP 634
Query: 393 ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSI-----DRNIPS-LV--P-- 442
+K+ G + +L++DG +++ G NK+ +L L + ++ P+ V P
Sbjct: 635 SNKKIVYGKAGKDATMLLSDDGSLIAMGSNKHNKLNLTQRVGFFTKEKKTPNDYVNKPTI 694
Query: 443 IHGFLPR--NIACGWWHTLLLAETTQI 467
+ GF R + + G +H+ ++ E+ Q+
Sbjct: 695 LQGFPERVVDFSVGSYHSGVILESGQV 721
Score = 102 (41.0 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 40/131 (30%), Positives = 62/131 (47%)
Query: 348 AGLWHTVCISVEGRVYVFGGNQFGQLG----TGVDQAEN-VPK-LLETP-ILESKRAKVV 400
AG T+ +S +G + G N+ +L G E P + P IL+ +VV
Sbjct: 644 AGKDATMLLSDDGSLIAMGSNKHNKLNLTQRVGFFTKEKKTPNDYVNKPTILQGFPERVV 703
Query: 401 --SCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR---NIACGW 455
S G+ HS V+ E GQV+ +G N +LGLG+S + + P+ L ++ CG
Sbjct: 704 DFSVGSYHSGVILESGQVMIFGRNDNTELGLGNSQKMAVRCVKPVKSLLHHACTHVLCGD 763
Query: 456 WHTLLLAETTQ 466
TL+ TT+
Sbjct: 764 GFTLV--STTE 772
Score = 69 (29.3 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 21/79 (26%), Positives = 34/79 (43%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+D+ G G F++ + G L+T+G+A + G K P ++
Sbjct: 519 RDIQSVGVGNYFSVICCDRGTLLTFGTAKNLGLG--KDAKDSAKPMLLEQLLRENIKDIY 576
Query: 111 AGWAHCVSVTEAGEVYTWG 129
G H V+V E+GE WG
Sbjct: 577 CGHDHVVAVLESGECLGWG 595
Score = 46 (21.3 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 9/34 (26%), Positives = 17/34 (50%)
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
LP+ S+ + A H + +T E++ +G C
Sbjct: 463 LPSRISIKQVALSKTHTMVLTNDNELFGFGDNSC 496
>FB|FBgn0002638 [details] [associations]
symbol:Rcc1 "Regulator of chromosome condensation 1 ortholog
(H. sapiens)" species:7227 "Drosophila melanogaster" [GO:0005634
"nucleus" evidence=ISS;NAS;IDA] [GO:0007417 "central nervous system
development" evidence=IDA] [GO:0030261 "chromosome condensation"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS;IDA]
[GO:0007076 "mitotic chromosome condensation" evidence=NAS]
[GO:0005087 "Ran guanyl-nucleotide exchange factor activity"
evidence=ISS;NAS] [GO:0005737 "cytoplasm" evidence=NAS] [GO:0007346
"regulation of mitotic cell cycle" evidence=IDA] [GO:0006607
"NLS-bearing substrate import into nucleus" evidence=IMP]
[GO:0000793 "condensed chromosome" evidence=IDA] [GO:0046822
"regulation of nucleocytoplasmic transport" evidence=IMP]
[GO:0050767 "regulation of neurogenesis" evidence=IMP] [GO:0022008
"neurogenesis" evidence=IMP] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0007346 GO:GO:0005737 EMBL:AE014296
GO:GO:0051301 GO:GO:0007067 GO:GO:0007417 GO:GO:0046822
GO:GO:0003682 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 GO:GO:0050767 PDB:3MVD PDBsum:3MVD
GeneTree:ENSGT00700000104160 EMBL:X58530 EMBL:AY070540 PIR:S15028
RefSeq:NP_523943.1 RefSeq:NP_729118.1 RefSeq:NP_729119.1
UniGene:Dm.8023 ProteinModelPortal:P25171 SMR:P25171 DIP:DIP-17766N
IntAct:P25171 MINT:MINT-781282 STRING:P25171 PaxDb:P25171
EnsemblMetazoa:FBtr0077074 EnsemblMetazoa:FBtr0077075
EnsemblMetazoa:FBtr0077076 GeneID:38669 KEGG:dme:Dmel_CG10480
CTD:38669 FlyBase:FBgn0002638 InParanoid:P25171 KO:K11493
OMA:PFEAIWA OrthoDB:EOG437PW4 PhylomeDB:P25171 ChiTaRS:Bj1
GenomeRNAi:38669 NextBio:809817 Bgee:P25171 GermOnline:CG10480
Uniprot:P25171
Length = 547
Score = 169 (64.5 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 56/169 (33%), Positives = 84/169 (49%)
Query: 305 TDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDI-QVEQIAAGLWHTVCISVEGRVY 363
T G +L G G GQ G G D L S + I I+AG H + ++ G +Y
Sbjct: 39 TVLGNVLVCGNGDVGQLGLGE--DILERKRLSPVAGIPDAVDISAGGMHNLVLTKSGDIY 96
Query: 364 VFGGNQFGQLG--TGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
FG N G LG T D +E+ P L++ P +A +S G HSA L EDG+V +WG
Sbjct: 97 SFGCNDEGALGRDTSEDGSESKPDLIDLP----GKALCISAGDSHSACLLEDGRVFAWGS 152
Query: 422 --NKYGQLGLGDSIDRNIPSLVPI-HGFLPRNIACGWWHTLLLAETTQI 467
+ +G +GL +ID N + + + G + +IA G H ++L ++
Sbjct: 153 FRDSHGNMGL--TIDGNKRTPIDLMEGTVCCSIASGADHLVILTTAGKV 199
Score = 150 (57.9 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 42/147 (28%), Positives = 72/147 (48%)
Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQ 345
AG +I+ GG H+ V+T +G + +FG G G ++ D L+D+ +
Sbjct: 71 AGIPDAVDISAGGMHNLVLTKSGDIYSFGCNDEGALGRDTSEDGSESK--PDLIDLPGKA 128
Query: 346 --IAAGLWHTVCISVEGRVYVFGG--NQFGQLGTGVDQAENVPKLLETPILESKRAKVVS 401
I+AG H+ C+ +GRV+ +G + G +G +D + P ++E ++
Sbjct: 129 LCISAGDSHSACLLEDGRVFAWGSFRDSHGNMGLTIDGNKRTP----IDLMEGTVCCSIA 184
Query: 402 CGARHSAVLTEDGQVLSWGWNKYGQLG 428
GA H +LT G+V + G + GQLG
Sbjct: 185 SGADHLVILTTAGKVFTVGCAEQGQLG 211
Score = 135 (52.6 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 44/133 (33%), Positives = 66/133 (49%)
Query: 314 GWGLYGQCGHGSTNDQ--LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
G + Q H + + L P + L DI+ IA G HTV ++ + + V G ++G
Sbjct: 267 GLNNFKQLAHETKGKEFALTP-IKTELKDIR--HIAGGQHHTVILTTDLKCSVVGRPEYG 323
Query: 372 QLGTGVDQAENVPKLLETPILESKRA-KVVS--CGARHSAVLTEDGQVLSWGWNKYGQLG 428
+LG G +V ++E P + K K+VS CG S +T DG++ SWG QLG
Sbjct: 324 RLGLG-----DVKDVVEKPTIVKKLTEKIVSVGCGEVCSYAVTIDGKLYSWGSGVNNQLG 378
Query: 429 LGDSIDRNIPSLV 441
+GD D P +V
Sbjct: 379 VGDGDDELEPIVV 391
Score = 108 (43.1 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 28/123 (22%), Positives = 57/123 (46%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQL-RPSYASSLMDIQVEQIAAG 349
++ IA G H+ ++T G YG+ G G D + +P+ L + ++ + G
Sbjct: 295 IRHIAGGQHHTVILTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVKKLTE-KIVSVGCG 353
Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
+ ++++G++Y +G QLG G E P ++ + + K + S G +H+
Sbjct: 354 EVCSYAVTIDGKLYSWGSGVNNQLGVGDGDDELEPIVVVSKNTQGKHMLLASGGGQHAIF 413
Query: 410 LTE 412
L +
Sbjct: 414 LVK 416
Score = 86 (35.3 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 46/190 (24%), Positives = 75/190 (39%)
Query: 53 KDVC-GGGCGFALATSESGKLITWGS-ADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
K +C G + E G++ WGS D G LT + TP L A
Sbjct: 127 KALCISAGDSHSACLLEDGRVFAWGSFRDSHGNMGLTIDGNKRTP--IDLMEGTVCCSIA 184
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVT-RDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
+G H V +T AG+V+T G E +++ R G K + + L +A P +
Sbjct: 185 SGADHLVILTTAGKVFTVGCAEQGQLGRLSERSISGEGRRGKRDLLRPTQLIITRAKPFE 244
Query: 170 -----------KRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVA 218
+ + +V+ ++ ++ + G EF L+P L I +A
Sbjct: 245 AIWATNYCTFMRESQTQVIWATGLNNFKQLAHE-TKGKEF-ALTPIKTELKD---IRHIA 299
Query: 219 AGGRHTLILS 228
G HT+IL+
Sbjct: 300 GGQHHTVILT 309
Score = 81 (33.6 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 23/77 (29%), Positives = 38/77 (49%)
Query: 54 DVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGET-PEPFPLPTEASVVKAAAG 112
D+ GG L ++SG + ++G D+ TS E+ P+ LP +A + +AG
Sbjct: 78 DISAGGM-HNLVLTKSGDIYSFGCNDEGALGRDTSEDGSESKPDLIDLPGKALCI--SAG 134
Query: 113 WAHCVSVTEAGEVYTWG 129
+H + E G V+ WG
Sbjct: 135 DSHSACLLEDGRVFAWG 151
Score = 58 (25.5 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 15/53 (28%), Positives = 26/53 (49%)
Query: 99 PLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
P+ V +AG H + +T++G++Y++G C + RD GS K
Sbjct: 69 PVAGIPDAVDISAGGMHNLVLTKSGDIYSFG---CNDEGALGRDTSEDGSESK 118
Score = 44 (20.5 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 26/89 (29%), Positives = 37/89 (41%)
Query: 150 QKDSTGKQSALPTEQAPPSDKRAGE----EVVKRRKTSSAREESENPASGDEFFTLSPCL 205
+K T +A EQ PP KRA E+ KRR N G L +
Sbjct: 4 RKALTNNNNAGEAEQQPPKAKRARIAFHLELPKRRTVLGNVLVCGNGDVGQ--LGLGEDI 61
Query: 206 VT---LNP--GVK-ITKVAAGGRHTLILS 228
+ L+P G+ ++AGG H L+L+
Sbjct: 62 LERKRLSPVAGIPDAVDISAGGMHNLVLT 90
>POMBASE|SPAC10F6.04 [details] [associations]
symbol:SPAC10F6.04 "RCC domain protein Ats1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006400 "tRNA modification"
evidence=ISO] [GO:0007017 "microtubule-based process" evidence=ISO]
PomBase:SPAC10F6.04 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829
GO:GO:0005634 EMBL:CU329670 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0006400 GO:GO:0007017 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
KO:K15462 OrthoDB:EOG4H75MP PIR:T37498 RefSeq:NP_593255.1
ProteinModelPortal:O42645 STRING:O42645 EnsemblFungi:SPAC10F6.04.1
GeneID:2542973 KEGG:spo:SPAC10F6.04 OMA:WIVIEEN NextBio:20804007
Uniprot:O42645
Length = 351
Score = 156 (60.0 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 57/175 (32%), Positives = 80/175 (45%)
Query: 294 IACGGRHSAVV-TDAGALLTFGWGLYGQCGHGS-TNDQ-LRPSYASSLMDIQ-VEQIAAG 349
+ CG S +V D + + G GL G+ G G+ +N Q LR L D + + I+AG
Sbjct: 94 LTCGWEFSVIVHADRRRVCSCGEGLSGELGQGNRSNSQGLREIDIPYLDDKEFIIDISAG 153
Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
L H +C++ EG +Y G + GQLG V + N L +E A+ V CG + SAV
Sbjct: 154 LRHWICVTNEGNLYGCGDGRKGQLGPVVMKTVNKVSFLGR--IE--HAQAVVCGVQFSAV 209
Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAET 464
L E G V+ G K+ D+ N L + N W TL L T
Sbjct: 210 LQETGHVIVLGGEKWNVAAECDAWQANNSELSSSICSISAN-----WSTLSLLST 259
Score = 125 (49.1 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 38/146 (26%), Positives = 65/146 (44%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN---DQLRPSYASSLMDIQVEQ-- 345
+++I+CGG H+ ++ + L G GQCG+ + L P Y + E+
Sbjct: 33 IEKISCGGNHTLLLDEDSQLWACGDNRKGQCGYEVKEPLYNPLSPDYLRIFTRVSHERWV 92
Query: 346 -IAAGLWHTVCISVEGR-VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKV-VSC 402
+ G +V + + R V G G+LG G + ++ P L+ K + +S
Sbjct: 93 FLTCGWEFSVIVHADRRRVCSCGEGLSGELGQGNRSNSQGLREIDIPYLDDKEFIIDISA 152
Query: 403 GARHSAVLTEDGQVLSWGWNKYGQLG 428
G RH +T +G + G + GQLG
Sbjct: 153 GLRHWICVTNEGNLYGCGDGRKGQLG 178
Score = 51 (23.0 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSD 229
SP +V + ++ K++ GG HTL+L +
Sbjct: 23 SPQIVPFDRAIE--KISCGGNHTLLLDE 48
>UNIPROTKB|F1NXV1 [details] [associations]
symbol:IBTK "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=IEA] [GO:0051209 "release of sequestered calcium ion into
cytosol" evidence=IEA] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 GO:GO:0051209 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GO:GO:0030292 OMA:VSALHHK
GeneTree:ENSGT00700000104160 EMBL:AADN02002424 EMBL:AADN02002425
IPI:IPI00590269 Ensembl:ENSGALT00000025575 Uniprot:F1NXV1
Length = 1359
Score = 180 (68.4 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 49/162 (30%), Positives = 82/162 (50%)
Query: 305 TDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLM--DIQVEQIAAGLWHTVCISVEGRV 362
TD + T+G + GHG + P + ++Q+ +H+V +S +G++
Sbjct: 142 TDLTEVYTWGNNINFTLGHGGQQSKHHPELVDLFPRNSVYIKQVVLCKFHSVFLSHKGQI 201
Query: 363 YVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWN 422
Y G Q G+LG G +Q VP+L+E L S + ++ H+ VLTEDG V ++G N
Sbjct: 202 YTCGHGQGGRLGHGDEQTCLVPRLVEG--LSSHQCSQIAAAKDHTVVLTEDGCVYTFGLN 259
Query: 423 KYGQLG-LGDSIDRNIPSLVP---IHGFLPRNIACGWWHTLL 460
+ QLG L + ++P V + G + +A G +HT+L
Sbjct: 260 TFHQLGILPPPANCSVPRQVQAKNLKGRMVIGVAAGRFHTVL 301
Score = 177 (67.4 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 48/140 (34%), Positives = 70/140 (50%)
Query: 290 YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAG 349
Y+K++ HS ++ G + T G G G+ GHG L P L Q QIAA
Sbjct: 181 YIKQVVLCKFHSVFLSHKGQIYTCGHGQGGRLGHGDEQTCLVPRLVEGLSSHQCSQIAAA 240
Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGARHSA 408
HTV ++ +G VY FG N F QLG A +VP+ ++ L+ + V+ G H+
Sbjct: 241 KDHTVVLTEDGCVYTFGLNTFHQLGILPPPANCSVPRQVQAKNLKGRMVIGVAAGRFHTV 300
Query: 409 VLTEDGQVLSWGWNKYGQLG 428
+ T++ V + G N GQLG
Sbjct: 301 LWTKEA-VYTMGLNG-GQLG 318
Score = 42 (19.8 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 7/10 (70%), Positives = 8/10 (80%)
Query: 120 TEAGEVYTWG 129
T+ EVYTWG
Sbjct: 142 TDLTEVYTWG 151
>MGI|MGI:2179432 [details] [associations]
symbol:Mycbp2 "MYC binding protein 2" species:10090 "Mus
musculus" [GO:0005515 "protein binding" evidence=IPI] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008045 "motor neuron axon
guidance" evidence=IMP] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0015630 "microtubule cytoskeleton" evidence=IDA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0021785
"branchiomotor neuron axon guidance" evidence=IMP] [GO:0021952
"central nervous system projection neuron axonogenesis"
evidence=IMP] [GO:0030424 "axon" evidence=IDA] [GO:0032880
"regulation of protein localization" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0048667 "cell morphogenesis
involved in neuron differentiation" evidence=IMP] [GO:0051493
"regulation of cytoskeleton organization" evidence=IMP]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 UniPathway:UPA00143 MGI:MGI:2179432
INTERPRO:IPR000408 Pfam:PF00415 Prosite:PS00518 GO:GO:0005634
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0015630 GO:GO:0006355
GO:GO:0046872 GO:GO:0016874 GO:GO:0030424 GO:GO:0008270
GO:GO:0032880 GO:GO:0006351 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0021952 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 CleanEx:MM_PAM
InterPro:IPR004939 PROSITE:PS51284 InterPro:IPR012983 Pfam:PF08005
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194 KO:K10693
PANTHER:PTHR12846 CTD:23077 eggNOG:NOG240798 HOVERGEN:HBG053153
OrthoDB:EOG4VQ9NB ChiTaRS:MYCBP2 GO:GO:0021785 EMBL:AY325887
EMBL:BC059257 IPI:IPI00380409 IPI:IPI00608114 RefSeq:NP_997098.2
UniGene:Mm.6478 PDB:3GBW PDB:3HWJ PDBsum:3GBW PDBsum:3HWJ
ProteinModelPortal:Q7TPH6 SMR:Q7TPH6 IntAct:Q7TPH6 STRING:Q7TPH6
PhosphoSite:Q7TPH6 PaxDb:Q7TPH6 PRIDE:Q7TPH6 DNASU:105689
GeneID:105689 KEGG:mmu:105689 UCSC:uc007uwl.1 HOGENOM:HOG000112908
InParanoid:Q7TPH6 EvolutionaryTrace:Q7TPH6 NextBio:357830
CleanEx:MM_MYCBP2 Genevestigator:Q7TPH6
GermOnline:ENSMUSG00000033004 Uniprot:Q7TPH6
Length = 4711
Score = 152 (58.6 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 37/119 (31%), Positives = 62/119 (52%)
Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWH 352
+++CG HS V+ + G + TFG+G +GQ GHG N + P+ +L Q+ A H
Sbjct: 906 QVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPST-QVTACSNH 964
Query: 353 TVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLT 411
T + ++G+V+ FG GQLG P +L+ P +K A + + G+++ T
Sbjct: 965 TAVLLMDGQVFTFGSFSKGQLGR--------P-ILDIPYWNAKPAPMPNIGSKYGRKAT 1014
Score = 144 (55.7 bits), Expect = 1.8e-09, Sum P(3) = 1.8e-09
Identities = 33/89 (37%), Positives = 49/89 (55%)
Query: 340 DIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKV 399
+++ Q++ G H+V + G VY FG Q GQLG G + P L++ L +V
Sbjct: 901 ELRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQA--LPGPSTQV 958
Query: 400 VSCGARHSAVLTEDGQVLSWGWNKYGQLG 428
+C + H+AVL DGQV ++G GQLG
Sbjct: 959 TAC-SNHTAVLLMDGQVFTFGSFSKGQLG 986
Score = 123 (48.4 bits), Expect = 3.3e-07, Sum P(3) = 3.3e-07
Identities = 31/73 (42%), Positives = 42/73 (57%)
Query: 396 RAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACG 454
RA VSCG HS VL E+G V ++G+ ++GQLG GD R P+LV + G + AC
Sbjct: 903 RAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQVTACS 962
Query: 455 WWHTLLLAETTQI 467
HT +L Q+
Sbjct: 963 N-HTAVLLMDGQV 974
Score = 73 (30.8 bits), Expect = 1.8e-09, Sum P(3) = 1.8e-09
Identities = 47/185 (25%), Positives = 71/185 (38%)
Query: 48 GGDSWKDVCGGGCGFALATSESGKLITWGSADDEG--QSYLTSGKHGETPEPFPLPTEAS 105
G D + G G FAL + +GK+ G G Q ++GK E P+
Sbjct: 488 GFDEESAILGAGREFALMKTANGKIYYTGKYQSLGIKQGGPSAGKWVE----LPITKSPK 543
Query: 106 VVKAAAGW--AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE 163
+V + G +H + V E G V+ G SA D S S ++ K P +
Sbjct: 544 IVHFSVGHDGSHALLVAEDGSVFFTG------SASKGEDGESTKSRRQSKPYK----PKK 593
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASG-DEFFTLSPCLVTLNPGVKITKVAAGGR 222
K +S ++ E G D ++ S LV+ G +T+VA G
Sbjct: 594 IIKMEGKIVVYTACNNGSSSVISKDGELYMFGKDAIYSDSSSLVSDLKGHFVTQVAMGKA 653
Query: 223 HTLIL 227
HT +L
Sbjct: 654 HTCVL 658
Score = 67 (28.6 bits), Expect = 1.8e-09, Sum P(3) = 1.8e-09
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 290 YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGH--GSTN 327
+V ++A G H+ V+ G + TFG GQCG G+ N
Sbjct: 644 FVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGRDTGAMN 683
Score = 47 (21.6 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWG 129
V + A G AH + + GEV+T+G
Sbjct: 645 VTQVAMGKAHTCVLMKNGEVWTFG 668
>UNIPROTKB|E1BX75 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005543 "phospholipid binding" evidence=IEA]
[GO:0001662 "behavioral fear response" evidence=IEA] [GO:0001726
"ruffle" evidence=IEA] [GO:0001881 "receptor recycling"
evidence=IEA] [GO:0005769 "early endosome" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0007626 "locomotory behavior" evidence=IEA]
[GO:0008104 "protein localization" evidence=IEA] [GO:0014069
"postsynaptic density" evidence=IEA] [GO:0016050 "vesicle
organization" evidence=IEA] [GO:0016197 "endosomal transport"
evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=IEA] [GO:0017137 "Rab GTPase binding"
evidence=IEA] [GO:0030027 "lamellipodium" evidence=IEA] [GO:0030676
"Rac guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0031982 "vesicle" evidence=IEA] [GO:0032313 "regulation of Rab
GTPase activity" evidence=IEA] [GO:0032855 "positive regulation of
Rac GTPase activity" evidence=IEA] [GO:0035249 "synaptic
transmission, glutamatergic" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0043234 "protein
complex" evidence=IEA] [GO:0043539 "protein serine/threonine kinase
activator activity" evidence=IEA] [GO:0048812 "neuron projection
morphogenesis" evidence=IEA] [GO:0051036 "regulation of endosome
size" evidence=IEA] InterPro:IPR000219 InterPro:IPR001849
Pfam:PF00621 PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 GO:GO:0005829
GO:GO:0005813 GO:GO:0043234 GO:GO:0014069 GO:GO:0008104
GO:GO:0006979 GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0043539 GO:GO:0016197 Gene3D:1.20.900.10 SUPFAM:SSF48065
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493 SMART:SM00698
PROSITE:PS51205 GeneTree:ENSGT00600000084242 OMA:AKPAIDF
GO:GO:0005769 GO:GO:0017112 GO:GO:0030676 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:AADN02019863
IPI:IPI00580588 Ensembl:ENSGALT00000013707 Uniprot:E1BX75
Length = 1651
Score = 154 (59.3 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 61/218 (27%), Positives = 96/218 (44%)
Query: 263 EHAASGKDRPLLV--RQGSVNSS-----GKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
E A K+R L+ R GS + + G G++ V + A G H ++T+ G + +FG
Sbjct: 9 EEAEGAKERGLVYTWRAGSCSVTPERLPGLCGKT-VLQAALGTNHGLLLTEGGEVYSFG- 66
Query: 316 GLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGT 375
L + G P ++L+ V +AAG +H ++ G VY++G N GQ
Sbjct: 67 KLPWRSGPEEFCAN-SPILENTLLGQHVITVAAGSFHNGAVTEGGVVYMWGNNSSGQCAV 125
Query: 376 GVDQAENVPKLL-----ETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLG 430
P+ + ET L S R ++CG H+ L+ ++ W W QLGL
Sbjct: 126 ANQPYVPEPQPISISDSETSPLLSVRVLQLACGEEHTLALSLSREI--WAWGSGCQLGL- 182
Query: 431 DSIDRNIPSLVP-----IHGFLPRNIACGWWHTLLLAE 463
I P P + G + IACG +H+L L +
Sbjct: 183 --ITTTFPVTKPQKVEHLAGRVVLQIACGAYHSLALVQ 218
Score = 135 (52.6 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 45/141 (31%), Positives = 69/141 (48%)
Query: 258 LIPCLEHAASGKDR----PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALL-- 311
L+ E + G R P L+ Q S K GR+ ++ +A +S +A ALL
Sbjct: 462 LVDIREEESEGGSRRLSLPGLLSQVSPRLLRKVGRAKMRTVALTPTYSG---EADALLPS 518
Query: 312 ----TFGWGLY--GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVF 365
+ WG GQ GHG +L+P SL +V Q++AG H++ ++ + +VY +
Sbjct: 519 LRTEVWSWGRGKDGQLGHGDVLPRLQPLCVKSLDGKEVIQLSAGGHHSLALTAKSQVYSW 578
Query: 366 GGNQFGQLGTGVDQAENVPKL 386
G N FGQLG + VP+L
Sbjct: 579 GSNIFGQLGH-TNSPTTVPRL 598
Score = 122 (48.0 bits), Expect = 7.8e-08, Sum P(2) = 7.8e-08
Identities = 38/109 (34%), Positives = 55/109 (50%)
Query: 357 SVEGRVYVFGGNQFGQLGTGVDQAENVPKL--LETPILESKRAKVVSCGARHSAVLTEDG 414
S+ V+ +G + GQLG G + +P+L L L+ K +S G HS LT
Sbjct: 518 SLRTEVWSWGRGKDGQLGHG----DVLPRLQPLCVKSLDGKEVIQLSAGGHHSLALTAKS 573
Query: 415 QVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAE 463
QV SWG N +GQLG +S +P L + G + A G ++L LA+
Sbjct: 574 QVYSWGSNIFGQLGHTNS-PTTVPRLAKVCGDGVWSTAAGSDYSLFLAD 621
Score = 89 (36.4 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 32/116 (27%), Positives = 53/116 (45%)
Query: 22 VYMWGYLPGTS-PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADD 80
VY +G LP S PE+ SPI G V G A +E G + WG+ +
Sbjct: 62 VYSFGKLPWRSGPEEFCANSPILENTLLGQHVITVAAGSFHNG-AVTEGGVVYMWGN-NS 119
Query: 81 EGQSYLTSGKHGETPEPFPLP-TEAS------VVKAAAGWAHCVSVTEAGEVYTWG 129
GQ + + + P+P + +E S V++ A G H ++++ + E++ WG
Sbjct: 120 SGQCAVANQPYVPEPQPISISDSETSPLLSVRVLQLACGEEHTLALSLSREIWAWG 175
Score = 80 (33.2 bits), Expect = 4.5e-08, Sum P(3) = 4.5e-08
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 78 ADDEGQSYL-TSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG---WR 131
A + G Y +G TPE P +V++AA G H + +TE GEVY++G WR
Sbjct: 14 AKERGLVYTWRAGSCSVTPERLPGLCGKTVLQAALGTNHGLLLTEGGEVYSFGKLPWR 71
Score = 42 (19.8 bits), Expect = 4.5e-08, Sum P(3) = 4.5e-08
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 212 VKITKVAAGGRHTLILS 228
V++ ++A G HTL LS
Sbjct: 150 VRVLQLACGEEHTLALS 166
Score = 41 (19.5 bits), Expect = 5.6e-08, Sum P(3) = 5.6e-08
Identities = 13/31 (41%), Positives = 15/31 (48%)
Query: 194 SG-DEFFTLSPCLVTLNPGVKITKVAAGGRH 223
SG +EF SP L G + VAAG H
Sbjct: 72 SGPEEFCANSPILENTLLGQHVITVAAGSFH 102
Score = 41 (19.5 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 28/110 (25%), Positives = 41/110 (37%)
Query: 21 VVYMWGY-LPGTSPEKSPILSPIPARLCGGDSWKD------VCGGGCG--FALATSESGK 71
VVYMWG G + P P + DS V CG LA S S +
Sbjct: 111 VVYMWGNNSSGQCAVANQPYVPEPQPISISDSETSPLLSVRVLQLACGEEHTLALSLSRE 170
Query: 72 LITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTE 121
+ WGS G +T+ P+ V++ A G H +++ +
Sbjct: 171 IWAWGSGCQLG--LITTTFPVTKPQKVEHLAGRVVLQIACGAYHSLALVQ 218
>UNIPROTKB|H0YEL8 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860
EMBL:AC124058 EMBL:AC124078 Ensembl:ENST00000529151 Uniprot:H0YEL8
Length = 299
Score = 161 (61.7 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 44/143 (30%), Positives = 67/143 (46%)
Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGH----GSTNDQL----RPSYASSLMDIQVEQ 345
IA G RH+ T +G + +G GL CG G T PS + L + +
Sbjct: 22 IAAGLRHAVAATASGIVFQWGTGL-ASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMC 80
Query: 346 IAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGAR 405
+ AG H+ ++ G VYV+G N+ GQL VP+ +E ++++ + G
Sbjct: 81 VLAGSDHSASLTDAGEVYVWGSNKHGQLANEAAFLP-VPQKIEAHCFQNEKVTAIWSGWT 139
Query: 406 HSAVLTEDGQVLSWGWNKYGQLG 428
H TE G++ +WG YGQLG
Sbjct: 140 HLVAQTETGKMFTWGRADYGQLG 162
Score = 156 (60.0 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 55/224 (24%), Positives = 90/224 (40%)
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
L C G+ PL + S + G HSA +TDAG + +G
Sbjct: 45 LASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNK 104
Query: 318 YGQCGHGSTNDQLRPSY-ASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTG 376
+GQ + + + A + +V I +G H V + G+++ +G +GQLG
Sbjct: 105 HGQLANEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLGRK 164
Query: 377 VDQAENVPKLLETPILESKR--------------AKVVSCGARHSAVLTEDGQVLSWGWN 422
++ E + L R A VSCG+ H+ + G SWGWN
Sbjct: 165 LETYEGWKLEKQDSFLPCSRPPNSMPSSPHCLTGATEVSCGSEHNLAII-GGVCYSWGWN 223
Query: 423 KYGQLGLGDSIDRNIPSLVPIHGFLPRN---IACGWWHTLLLAE 463
++G G D + N+ + P+ L + + CG H+L L +
Sbjct: 224 EHGMCG--DGTEANVWAPKPVQALLSSSGLLVGCGAGHSLALCQ 265
Score = 138 (53.6 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 40/128 (31%), Positives = 59/128 (46%)
Query: 346 IAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL--ETPI----LESKRAKV 399
IAAGL H V + G V+ +G G + + +P + P LE+ +A
Sbjct: 22 IAAGLRHAVAATASGIVFQWGTG-LASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMC 80
Query: 400 VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIAC---GWW 456
V G+ HSA LT+ G+V WG NK+GQL ++ +P + H F + GW
Sbjct: 81 VLAGSDHSASLTDAGEVYVWGSNKHGQLA-NEAAFLPVPQKIEAHCFQNEKVTAIWSGWT 139
Query: 457 HTLLLAET 464
H + ET
Sbjct: 140 HLVAQTET 147
>UNIPROTKB|Q5BIW4 [details] [associations]
symbol:ALS2 "Alsin" species:9598 "Pan troglodytes"
[GO:0001662 "behavioral fear response" evidence=ISS] [GO:0001726
"ruffle" evidence=ISS] [GO:0001881 "receptor recycling"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0005769
"early endosome" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0006979 "response to oxidative stress" evidence=ISS]
[GO:0007528 "neuromuscular junction development" evidence=ISS]
[GO:0007626 "locomotory behavior" evidence=ISS] [GO:0008104
"protein localization" evidence=ISS] [GO:0014069 "postsynaptic
density" evidence=ISS] [GO:0016050 "vesicle organization"
evidence=ISS] [GO:0016197 "endosomal transport" evidence=ISS]
[GO:0017112 "Rab guanyl-nucleotide exchange factor activity"
evidence=ISS] [GO:0017137 "Rab GTPase binding" evidence=ISS]
[GO:0030027 "lamellipodium" evidence=ISS] [GO:0030425 "dendrite"
evidence=ISS] [GO:0030676 "Rac guanyl-nucleotide exchange factor
activity" evidence=ISS] [GO:0031982 "vesicle" evidence=ISS]
[GO:0032313 "regulation of Rab GTPase activity" evidence=ISS]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=ISS] [GO:0035249 "synaptic transmission, glutamatergic"
evidence=ISS] [GO:0042803 "protein homodimerization activity"
evidence=ISS] [GO:0043197 "dendritic spine" evidence=ISS]
[GO:0043234 "protein complex" evidence=ISS] [GO:0043539 "protein
serine/threonine kinase activator activity" evidence=ISS]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=ISS] [GO:0048812 "neuron projection morphogenesis"
evidence=ISS] [GO:0051036 "regulation of endosome size"
evidence=ISS] [GO:0071902 "positive regulation of protein
serine/threonine kinase activity" evidence=ISS] [GO:0005813
"centrosome" evidence=ISS] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=ISS] InterPro:IPR000219
InterPro:IPR001849 Pfam:PF00621 PROSITE:PS00741 PROSITE:PS50003
PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
Pfam:PF02204 GO:GO:0005829 GO:GO:0043234 GO:GO:0042803
GO:GO:0014069 GO:GO:0008104 GO:GO:0006979 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0030027
GO:GO:0016197 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0001726 eggNOG:COG4642
InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493 SMART:SM00698
PROSITE:PS51205 CTD:57679 HOVERGEN:HBG037320 KO:K04575
OrthoDB:EOG4FTVZP GO:GO:0005769 GO:GO:0031982 GO:GO:0017137
GO:GO:0017112 GO:GO:0030676 GO:GO:0001662 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
HOGENOM:HOG000033908 EMBL:BK005194 RefSeq:NP_001073389.1
UniGene:Ptr.813 ProteinModelPortal:Q5BIW4 STRING:Q5BIW4
PRIDE:Q5BIW4 GeneID:470613 KEGG:ptr:470613 InParanoid:Q5BIW4
NextBio:20847741 Uniprot:Q5BIW4
Length = 1657
Score = 132 (51.5 bits), Expect = 5.2e-09, Sum P(2) = 5.2e-09
Identities = 53/172 (30%), Positives = 76/172 (44%)
Query: 258 LIPCLEHAASGKDR----PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALL-- 311
L+ E G R P L+ Q S KA R + + +S +A ALL
Sbjct: 467 LVDIREEETEGGSRRLSLPGLLSQVSPRLLRKAARVKTRTVVLTPTYSG---EADALLPS 523
Query: 312 ------TFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVF 365
T+G G GQ GHG +L+P L +V + AG +H++ ++ + +VY +
Sbjct: 524 LRTEVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSW 583
Query: 366 GGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL--TEDGQ 415
G N FGQLG D VP+L + I V+ G +S L TED Q
Sbjct: 584 GSNTFGQLGHS-DFPTTVPRLAK--ISSENGVWSVAAGRDYSLFLVDTEDFQ 632
Score = 132 (51.5 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 43/135 (31%), Positives = 63/135 (46%)
Query: 290 YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP---------SYASSLMD 340
YV +A G HS VTD G +G GQC N Q P S AS L+
Sbjct: 92 YVVTVATGSFHSGAVTDNGVAYMWGENSAGQCA--VANQQYVPEPNPVSIADSEASPLLA 149
Query: 341 IQVEQIAAGLWHTVCISVEGRVYVFG-GNQFGQLGTG--VDQAENVPKLLETPILESKRA 397
+++ Q+A G HT+ +S+ ++ +G G Q G + T V + + V L +L+
Sbjct: 150 VRILQLACGEEHTLALSISREIWAWGTGCQLGLITTAFPVTKPQKVEHLAGRVVLQ---- 205
Query: 398 KVVSCGARHSAVLTE 412
V+CGA HS L +
Sbjct: 206 --VACGAFHSLALVQ 218
Score = 128 (50.1 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 81/340 (23%), Positives = 132/340 (38%)
Query: 136 SAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP-SDKRAGEEVVKRRKTSSAREESENPAS 194
SA++T A S Q++ G P D +A E +++ S RE+SE+
Sbjct: 309 SAQITSS--DAMSSQQNVMGTTEISSARNIPSYPDTQAVNEYLRKLSDHSVREDSEH--- 363
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAA-GGRHTLILSDMXXXXXXXXXXXXXXXXXSRIKMV 253
G++ P L P + + ++L++S S K++
Sbjct: 364 GEKPMPSQPLLEEAIPNLHSPPTTSTSALNSLVVS-CASAVGVRVAATYEAGALSLKKVM 422
Query: 254 PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTF 313
PC A +G + +G +S VK+ + G+ S+ + D T
Sbjct: 423 NFYSTTPCETGAQAGSSA--IGPEGLKDSR----EEQVKQESMQGKKSSSLVDIREEETE 476
Query: 314 GWG----LYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQ 369
G L G S LR + + + +G + S+ V+ +G +
Sbjct: 477 GGSRRLSLPGLLSQVSPR-LLRKAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGK 535
Query: 370 FGQLGTGVDQAENVPKL--LETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
GQLG G + +P+L L L+ K + G HS LT QV SWG N +GQL
Sbjct: 536 EGQLGHG----DVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSNTFGQL 591
Query: 428 GLGDSIDRNIPSLVPI---HGFLPRNIACGWWHTLLLAET 464
G D +P L I +G ++A G ++L L +T
Sbjct: 592 GHSD-FPTTVPRLAKISSENGVW--SVAAGRDYSLFLVDT 628
Score = 90 (36.7 bits), Expect = 5.2e-09, Sum P(2) = 5.2e-09
Identities = 47/152 (30%), Positives = 67/152 (44%)
Query: 88 SGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG---WR----ECVPSAKVT 140
+G TPE P +V++AA G H V +TE GEVY++G WR E PS+ +
Sbjct: 25 AGSFPITPERLPGWGGKTVLQAALGVKHGVLLTEDGEVYSFGTLPWRSGPVEICPSSPIL 84
Query: 141 RDFGSAGSFQKD-STGK-QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE-NPAS-GD 196
+ G + +TG S T+ GE + ++ + E NP S D
Sbjct: 85 EN-ALVGQYVVTVATGSFHSGAVTDNGVAY--MWGENSAGQCAVANQQYVPEPNPVSIAD 141
Query: 197 EFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
SP L V+I ++A G HTL LS
Sbjct: 142 S--EASPLLA-----VRILQLACGEEHTLALS 166
Score = 77 (32.2 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 30/116 (25%), Positives = 52/116 (44%)
Query: 22 VYMWGYLPGTS-PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADD 80
VY +G LP S P + SPI G V G A +++G WG +
Sbjct: 62 VYSFGTLPWRSGPVEICPSSPILENALVGQYVVTVATGSFHSG-AVTDNGVAYMWGE-NS 119
Query: 81 EGQSYLTSGKHGETPEPFPLP-TEAS------VVKAAAGWAHCVSVTEAGEVYTWG 129
GQ + + ++ P P + +EAS +++ A G H ++++ + E++ WG
Sbjct: 120 AGQCAVANQQYVPEPNPVSIADSEASPLLAVRILQLACGEEHTLALSISREIWAWG 175
>UNIPROTKB|E2RSG1 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0035023 "regulation of Rho protein signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005543 "phospholipid binding" evidence=IEA]
[GO:0005089 "Rho guanyl-nucleotide exchange factor activity"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
Pfam:PF02204 GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0005622 GO:GO:0005089 Gene3D:1.20.900.10 SUPFAM:SSF48065
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023
InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493 SMART:SM00698
PROSITE:PS51205 GeneTree:ENSGT00600000084242 KO:K04575 OMA:AKPAIDF
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:AAEX03018021
RefSeq:XP_003640234.1 Ensembl:ENSCAFT00000019642 GeneID:100856109
KEGG:cfa:100856109 Uniprot:E2RSG1
Length = 1656
Score = 130 (50.8 bits), Expect = 6.7e-09, Sum P(2) = 6.7e-09
Identities = 52/172 (30%), Positives = 77/172 (44%)
Query: 258 LIPCLEHAASGKDR----PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALL-- 311
L+ E + G R P L+ Q S KA R + + +S +A ALL
Sbjct: 466 LVDIREEESEGGSRRLSLPGLLSQVSPRLLRKAARVKTRTVVLTPTYSG---EADALLPS 522
Query: 312 ------TFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVF 365
T+G G GQ GHG +L+P L +V + AG +H++ ++ + +VY +
Sbjct: 523 LRTEVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIYLEAGGYHSLALTAKSQVYSW 582
Query: 366 GGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL--TEDGQ 415
G N FGQLG D VP+L + + V+ G +S L TED Q
Sbjct: 583 GSNTFGQLGH-YDFPTTVPRLAK--VSSENGVWSVAAGQDYSLFLVDTEDFQ 631
Score = 130 (50.8 bits), Expect = 0.00014, P = 0.00014
Identities = 49/190 (25%), Positives = 83/190 (43%)
Query: 284 GKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQV 343
G G++ V + A G +H ++T+ G + +FG L + P ++L+ V
Sbjct: 37 GWGGKT-VLQAALGVKHGVLLTEDGEVYSFGT-LPWRSEPAEICPSC-PILENALIGQFV 93
Query: 344 EQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL-----ETPILESKRAK 398
+A+G +H ++ G Y++G N GQ Q P + ET L + R
Sbjct: 94 VTVASGSFHNGAVTESGVAYMWGENSAGQCAVANQQYVPEPNPVSISDSETSSLLAVRIL 153
Query: 399 VVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-----IHGFLPRNIAC 453
++CG H+ L+ ++ W W QLGL I P P + G + +AC
Sbjct: 154 QLACGEEHTLALSISREI--WAWGTGCQLGL---ITTTFPVTKPQKVEHLAGRVVLQVAC 208
Query: 454 GWWHTLLLAE 463
G +H+L L +
Sbjct: 209 GAFHSLALVQ 218
Score = 117 (46.2 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 37/113 (32%), Positives = 55/113 (48%)
Query: 357 SVEGRVYVFGGNQFGQLGTGVDQAENVPKL--LETPILESKRAKVVSCGARHSAVLTEDG 414
S+ V+ +G + GQLG G + +P+L L L+ K + G HS LT
Sbjct: 522 SLRTEVWTWGKGKEGQLGHG----DVLPRLQPLCVKCLDGKEVIYLEAGGYHSLALTAKS 577
Query: 415 QVLSWGWNKYGQLGLGDSIDRNIPSLVPI---HGFLPRNIACGWWHTLLLAET 464
QV SWG N +GQLG D +P L + +G ++A G ++L L +T
Sbjct: 578 QVYSWGSNTFGQLGHYD-FPTTVPRLAKVSSENGVW--SVAAGQDYSLFLVDT 627
Score = 91 (37.1 bits), Expect = 6.7e-09, Sum P(2) = 6.7e-09
Identities = 46/151 (30%), Positives = 68/151 (45%)
Query: 88 SGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG---WR----ECVPSAKVT 140
+G + TPE P +V++AA G H V +TE GEVY++G WR E PS +
Sbjct: 25 AGSYSVTPERLPGWGGKTVLQAALGVKHGVLLTEDGEVYSFGTLPWRSEPAEICPSCPIL 84
Query: 141 RDFGSAGSFQKD-STGK-QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE-NPASGDE 197
+ G F ++G + TE GE + ++ + E NP S +
Sbjct: 85 EN-ALIGQFVVTVASGSFHNGAVTESGVAY--MWGENSAGQCAVANQQYVPEPNPVSISD 141
Query: 198 FFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
T S L+ V+I ++A G HTL LS
Sbjct: 142 SETSS--LLA----VRILQLACGEEHTLALS 166
Score = 75 (31.5 bits), Expect = 2.4e-08, Sum P(3) = 2.4e-08
Identities = 30/116 (25%), Positives = 50/116 (43%)
Query: 22 VYMWGYLPGTS-PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADD 80
VY +G LP S P + PI G V G A +ESG WG +
Sbjct: 62 VYSFGTLPWRSEPAEICPSCPILENALIGQFVVTVASGSFHNG-AVTESGVAYMWGE-NS 119
Query: 81 EGQSYLTSGKHGETPEPFPLP-TEAS------VVKAAAGWAHCVSVTEAGEVYTWG 129
GQ + + ++ P P + +E S +++ A G H ++++ + E++ WG
Sbjct: 120 AGQCAVANQQYVPEPNPVSISDSETSSLLAVRILQLACGEEHTLALSISREIWAWG 175
Score = 55 (24.4 bits), Expect = 2.4e-08, Sum P(3) = 2.4e-08
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 144 GSAGSFQKDSTGKQSALPTEQAPPS--DKRAGEEVVKRRKTSSAREESEN 191
G A S Q++ G + +P+ Q PS D +A E +++ S R+ SEN
Sbjct: 314 GDAISSQQEIMGT-TEIPSAQNIPSYPDTQAVNEYMQKLSDHSVRDNSEN 362
>DICTYBASE|DDB_G0282381 [details] [associations]
symbol:gefC "Ras nucleotide exchange factor"
species:44689 "Dictyostelium discoideum" [GO:0051056 "regulation of
small GTPase mediated signal transduction" evidence=IEA]
[GO:0035023 "regulation of Rho protein signal transduction"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005089 "Rho guanyl-nucleotide exchange factor
activity" evidence=IEA] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] InterPro:IPR000219
InterPro:IPR000651 InterPro:IPR001895 InterPro:IPR008937
InterPro:IPR019804 Pfam:PF00617 Pfam:PF00618 Pfam:PF00621
PROSITE:PS00720 PROSITE:PS00741 PROSITE:PS50009 PROSITE:PS50010
PROSITE:PS50212 SMART:SM00147 SMART:SM00229 dictyBase:DDB_G0282381
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0007264 EMBL:AAFI02000047
GenomeReviews:CM000152_GR GO:GO:0005622 GO:GO:0005089
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
Gene3D:1.10.840.10 InterPro:IPR023578 SUPFAM:SSF48366
PANTHER:PTHR23113 HSSP:Q07889 EMBL:AY160092 RefSeq:XP_640241.1
ProteinModelPortal:Q8IS20 STRING:Q8IS20 EnsemblProtists:DDB0215004
GeneID:8623780 KEGG:ddi:DDB_G0282381 InParanoid:Q8IS20 OMA:SIATIRG
Uniprot:Q8IS20
Length = 1457
Score = 143 (55.4 bits), Expect = 2.6e-07, Sum P(3) = 2.6e-07
Identities = 37/130 (28%), Positives = 72/130 (55%)
Query: 326 TNDQLRPSYASSLMDIQ-VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVP 384
++ L+ + +++I+ V+ IA G+ +T ++ G +Y++G N+ G+LG G + +
Sbjct: 398 SSSSLQTTCTPKMVEIKCVKYIATGVKNTAALTEWGELYMWGINEHGELGLG----DTID 453
Query: 385 KLLETPILESKRAKV--VSCGARHSAVLTEDGQVLSWGWN-KYGQLGLGDSIDRNIPSLV 441
+ T ++ K V ++C + HSA TE G++ WG + + G++ + IPS +
Sbjct: 454 RRTPTRVIRLKNEVVSTIACSSTHSACYTESGKMYVWGQSDETGKI-------QAIPSPL 506
Query: 442 PIHGFLPRNI 451
PIH +L R I
Sbjct: 507 PIHSYLDREI 516
Score = 141 (54.7 bits), Expect = 7.1e-09, Sum P(2) = 7.1e-09
Identities = 29/78 (37%), Positives = 49/78 (62%)
Query: 389 TP-ILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS-LVPIHGF 446
TP ++E K K ++ G +++A LTE G++ WG N++G+LGLGD+IDR P+ ++ +
Sbjct: 407 TPKMVEIKCVKYIATGVKNTAALTEWGELYMWGINEHGELGLGDTIDRRTPTRVIRLKNE 466
Query: 447 LPRNIACGWWHTLLLAET 464
+ IAC H+ E+
Sbjct: 467 VVSTIACSSTHSACYTES 484
Score = 133 (51.9 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 40/142 (28%), Positives = 68/142 (47%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
VK IA G +++A +T+ G L +G +G+ G G T D+ P+ L + V IA
Sbjct: 416 VKYIATGVKNTAALTEWGELYMWGINEHGELGLGDTIDRRTPTRVIRLKNEVVSTIACSS 475
Query: 351 WHTVCISVEGRVYVFG-GNQFGQLGTGVDQAENVPKLLETPILESK------------RA 397
H+ C + G++YV+G ++ G++ + + L+ I +
Sbjct: 476 THSACYTESGKMYVWGQSDETGKI-QAIPSPLPIHSYLDREIKSPNGGGVGGFFGGGGKI 534
Query: 398 KVVSCGARHSAVLTEDGQVLSW 419
K ++CG R AVLT+ G+V W
Sbjct: 535 KQLACGQRCIAVLTQMGEVFMW 556
Score = 110 (43.8 bits), Expect = 0.00042, Sum P(3) = 0.00042
Identities = 44/133 (33%), Positives = 63/133 (47%)
Query: 287 GRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQI 346
G +K++ACG R AV+T G + F W + G LR ++L + V I
Sbjct: 530 GGGKIKQLACGQRCIAVLTQMGEV--FMWEIPG------IPIPLR----NALENHSVRNI 577
Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET----PI-LESKRAKV-V 400
G +H VC++ G V G N+ GQLG D AEN P +++ P L S V +
Sbjct: 578 VMGNFHLVCLTDSGEVVTIGRNKTGQLGR-TD-AENEPGIVKQLSFDPDGLNSDEFVVSI 635
Query: 401 SCGARHSAVLTED 413
+ G HS L E+
Sbjct: 636 AAGEFHSVALVEN 648
Score = 78 (32.5 bits), Expect = 7.1e-09, Sum P(2) = 7.1e-09
Identities = 21/72 (29%), Positives = 38/72 (52%)
Query: 309 ALLTFGWGLYGQCGHGSTNDQLRPS-----YASSLMDIQVEQIAAGLWHTVCISVEGRVY 363
++ TFG G G G G D P+ Y + + D +V+++A G +HTV ++ + +Y
Sbjct: 2 SVFTFGHGSNGALGLGKITDDTCPTPQKVNYFTEI-DKRVKKVACGSYHTVFVTDDEHLY 60
Query: 364 VFGGNQFGQLGT 375
+ G + + GT
Sbjct: 61 ICGIKKDPKHGT 72
Score = 69 (29.3 bits), Expect = 0.00042, Sum P(3) = 0.00042
Identities = 21/66 (31%), Positives = 29/66 (43%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETP-EPFPLPTEASVVKAAAGWAHCVSVTEAG 123
A +E G+L WG ++ G+ L TP L E V A H TE+G
Sbjct: 428 ALTEWGELYMWG-INEHGELGLGDTIDRRTPTRVIRLKNEV-VSTIACSSTHSACYTESG 485
Query: 124 EVYTWG 129
++Y WG
Sbjct: 486 KMYVWG 491
Score = 61 (26.5 bits), Expect = 2.6e-07, Sum P(3) = 2.6e-07
Identities = 11/33 (33%), Positives = 20/33 (60%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGH 323
+K++A G H ++T+ G + T+G GQ G+
Sbjct: 335 IKQVALGNYHIVLLTEGGNVWTWGSNSNGQLGY 367
Score = 61 (26.5 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 15/34 (44%), Positives = 19/34 (55%)
Query: 96 EPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
E PL T + + A G H V +TE G V+TWG
Sbjct: 328 ENSPLNT---IKQVALGNYHIVLLTEGGNVWTWG 358
Score = 56 (24.8 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGST 326
VK++ACG H+ VTD L + G+ HG+T
Sbjct: 40 VKKVACGSYHTVFVTDDEHL--YICGIKKDPKHGTT 73
Score = 46 (21.3 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 15/35 (42%), Positives = 17/35 (48%)
Query: 53 KDVCGGGCGFALATSESGKLITWGSADDEGQ-SYL 86
K V G L T E G + TWGS + GQ YL
Sbjct: 336 KQVALGNYHIVLLT-EGGNVWTWGS-NSNGQLGYL 368
Score = 43 (20.2 bits), Expect = 2.6e-07, Sum P(3) = 2.6e-07
Identities = 7/17 (41%), Positives = 12/17 (70%)
Query: 213 KITKVAAGGRHTLILSD 229
++ KVA G HT+ ++D
Sbjct: 39 RVKKVACGSYHTVFVTD 55
Score = 42 (19.8 bits), Expect = 5.3e-07, Sum P(3) = 5.3e-07
Identities = 14/38 (36%), Positives = 17/38 (44%)
Query: 94 TPEPFPLPTEAS--VVKAAAGWAHCVSVTEAGEVYTWG 129
TP+ TE V K A G H V VT+ +Y G
Sbjct: 26 TPQKVNYFTEIDKRVKKVACGSYHTVFVTDDEHLYICG 63
Score = 38 (18.4 bits), Expect = 0.00042, Sum P(3) = 0.00042
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 150 QKDSTGKQSALPT 162
Q D TGK A+P+
Sbjct: 492 QSDETGKIQAIPS 504
>UNIPROTKB|F1MMV0 [details] [associations]
symbol:IBTK "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051209 "release of sequestered calcium ion into
cytosol" evidence=IEA] [GO:0030292 "protein tyrosine kinase
inhibitor activity" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0051209
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS50012 GO:GO:0030292 OMA:VSALHHK
GeneTree:ENSGT00700000104160 EMBL:DAAA02025482 EMBL:DAAA02025483
IPI:IPI00708608 Ensembl:ENSBTAT00000038116 Uniprot:F1MMV0
Length = 1353
Score = 177 (67.4 bits), Expect = 7.4e-09, Sum P(2) = 7.4e-09
Identities = 54/162 (33%), Positives = 78/162 (48%)
Query: 305 TDAGALLTFGWGLYGQCGHGSTNDQLRPSYAS--SLMDIQVEQIAAGLWHTVCISVEGRV 362
TD + T+G GHGS N + P S I ++Q+ +H+V +S +G+V
Sbjct: 139 TDPTDVYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQV 198
Query: 363 YVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWN 422
Y G G+LG G +Q VP+L+E L V+ H+ VLTEDG V ++G N
Sbjct: 199 YTCGHGPGGRLGHGDEQTCLVPRLVEG--LSGHNCSQVAAAKDHTVVLTEDGCVYTFGLN 256
Query: 423 KYGQLGL-GDSIDRNIPSLVPIHGFLPRNI---ACGWWHTLL 460
+ QLGL N+P + R I A G +HT+L
Sbjct: 257 IFHQLGLIPPPSSCNVPRQMQAKYLKGRTIIGVAAGRFHTVL 298
Score = 170 (64.9 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 46/140 (32%), Positives = 68/140 (48%)
Query: 290 YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAG 349
Y+K++ HS ++ G + T G G G+ GHG L P L Q+AA
Sbjct: 178 YIKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLSGHNCSQVAAA 237
Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGARHSA 408
HTV ++ +G VY FG N F QLG + NVP+ ++ L+ + V+ G H+
Sbjct: 238 KDHTVVLTEDGCVYTFGLNIFHQLGLIPPPSSCNVPRQMQAKYLKGRTIIGVAAGRFHTV 297
Query: 409 VLTEDGQVLSWGWNKYGQLG 428
+ T + V + G N GQLG
Sbjct: 298 LWTREA-VYTMGLNG-GQLG 315
Score = 39 (18.8 bits), Expect = 7.4e-09, Sum P(2) = 7.4e-09
Identities = 6/10 (60%), Positives = 8/10 (80%)
Query: 120 TEAGEVYTWG 129
T+ +VYTWG
Sbjct: 139 TDPTDVYTWG 148
>UNIPROTKB|Q96Q42 [details] [associations]
symbol:ALS2 "Alsin" species:9606 "Homo sapiens" [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001881 "receptor recycling"
evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0007626
"locomotory behavior" evidence=IEA] [GO:0008104 "protein
localization" evidence=IEA] [GO:0008219 "cell death" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016050 "vesicle organization"
evidence=IEA] [GO:0016197 "endosomal transport" evidence=IEA]
[GO:0016601 "Rac protein signal transduction" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0032313 "regulation of Rab
GTPase activity" evidence=IEA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0005769 "early endosome"
evidence=IDA] [GO:0007032 "endosome organization" evidence=IGI;NAS]
[GO:0043234 "protein complex" evidence=IDA] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IDA]
[GO:0017137 "Rab GTPase binding" evidence=NAS;IDA] [GO:0051036
"regulation of endosome size" evidence=IEP] [GO:0032855 "positive
regulation of Rac GTPase activity" evidence=IDA] [GO:0035022
"positive regulation of Rac protein signal transduction"
evidence=IC] [GO:0030425 "dendrite" evidence=IDA] [GO:0048812
"neuron projection morphogenesis" evidence=IDA] [GO:0043539
"protein serine/threonine kinase activator activity" evidence=IDA]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=IDA] [GO:0001726 "ruffle" evidence=ISS] [GO:0030027
"lamellipodium" evidence=ISS] [GO:0005087 "Ran guanyl-nucleotide
exchange factor activity" evidence=NAS] [GO:0030676 "Rac
guanyl-nucleotide exchange factor activity" evidence=IDA]
[GO:0042803 "protein homodimerization activity" evidence=IPI]
[GO:0030426 "growth cone" evidence=ISS] [GO:0005813 "centrosome"
evidence=IDA] [GO:0071902 "positive regulation of protein
serine/threonine kinase activity" evidence=IDA] InterPro:IPR000219
InterPro:IPR001849 Pfam:PF00621 PROSITE:PS00741 PROSITE:PS50003
PROSITE:PS50010 SMART:SM00233 EMBL:AB053305 EMBL:AB053306
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 GO:GO:0005829
GO:GO:0005813 GO:GO:0043234 GO:GO:0014069 GO:GO:0008104
GO:GO:0006979 GO:GO:0016020 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0008219 EMBL:CH471063 GO:GO:0030424
GO:GO:0043025 GO:GO:0030425 GO:GO:0007528 GO:GO:0001701
GO:GO:0048812 GO:GO:0007626 GO:GO:0035249 GO:GO:0043539
GO:GO:0030027 GO:GO:0016197 GO:GO:0030426 Gene3D:1.20.900.10
SUPFAM:SSF48065 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0007409 GO:GO:0001726 GO:GO:0016601
GO:GO:0007032 eggNOG:COG4642 InterPro:IPR003409 InterPro:IPR003123
Pfam:PF02493 SMART:SM00698 PROSITE:PS51205 EMBL:AF391100
EMBL:AB046783 EMBL:AK023024 EMBL:AC007242 EMBL:AC007279
EMBL:BC029174 IPI:IPI00242146 IPI:IPI00295004 IPI:IPI00295005
RefSeq:NP_001129217.1 RefSeq:NP_065970.2 UniGene:Hs.471096
UniGene:Hs.621812 ProteinModelPortal:Q96Q42 SMR:Q96Q42
MINT:MINT-1632128 STRING:Q96Q42 PhosphoSite:Q96Q42 DMDM:296434394
PaxDb:Q96Q42 PRIDE:Q96Q42 Ensembl:ENST00000264276
Ensembl:ENST00000467448 GeneID:57679 KEGG:hsa:57679 UCSC:uc002uyo.3
UCSC:uc002uyq.3 UCSC:uc002uyr.3 CTD:57679 GeneCards:GC02M202564
H-InvDB:HIX0200249 HGNC:HGNC:443 HPA:HPA046588 MIM:205100
MIM:606352 MIM:606353 MIM:607225 neXtProt:NX_Q96Q42 Orphanet:803
Orphanet:293168 Orphanet:300605 Orphanet:247604 PharmGKB:PA24732
HOVERGEN:HBG037320 InParanoid:Q96Q42 KO:K04575 OMA:AKPAIDF
OrthoDB:EOG4FTVZP ChiTaRS:ALS2 GenomeRNAi:57679 NextBio:64490
ArrayExpress:Q96Q42 Bgee:Q96Q42 CleanEx:HS_ALS2
Genevestigator:Q96Q42 GermOnline:ENSG00000003393 GO:GO:0005769
GO:GO:0031982 GO:GO:0017137 GO:GO:0017112 GO:GO:0030676
GO:GO:0005087 GO:GO:0001662 GO:GO:0032855 GO:GO:0035022
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
Uniprot:Q96Q42
Length = 1657
Score = 131 (51.2 bits), Expect = 8.5e-09, Sum P(2) = 8.5e-09
Identities = 52/172 (30%), Positives = 76/172 (44%)
Query: 258 LIPCLEHAASGKDR----PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALL-- 311
L+ E G R P L+ Q S KA R + + +S +A ALL
Sbjct: 467 LVDIREEETEGGSRRLSLPGLLSQVSPRLLRKAARVKTRTVVLTPTYSG---EADALLPS 523
Query: 312 ------TFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVF 365
T+G G GQ GHG +L+P L +V + AG +H++ ++ + +VY +
Sbjct: 524 LRTEVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSW 583
Query: 366 GGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL--TEDGQ 415
G N FGQLG D VP+L + I ++ G +S L TED Q
Sbjct: 584 GSNTFGQLGHS-DFPTTVPRLAK--ISSENGVWSIAAGRDYSLFLVDTEDFQ 632
Score = 131 (51.2 bits), Expect = 0.00011, P = 0.00011
Identities = 43/135 (31%), Positives = 63/135 (46%)
Query: 290 YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP---------SYASSLMD 340
YV +A G HS VTD G +G GQC N Q P S AS L+
Sbjct: 92 YVITVATGSFHSGAVTDNGVAYMWGENSAGQCA--VANQQYVPEPNPVSIADSEASPLLA 149
Query: 341 IQVEQIAAGLWHTVCISVEGRVYVFG-GNQFGQLGTG--VDQAENVPKLLETPILESKRA 397
+++ Q+A G HT+ +S+ ++ +G G Q G + T V + + V L +L+
Sbjct: 150 VRILQLACGEEHTLALSISREIWAWGTGCQLGLITTAFPVTKPQKVEHLAGRVVLQ---- 205
Query: 398 KVVSCGARHSAVLTE 412
V+CGA HS L +
Sbjct: 206 --VACGAFHSLALVQ 218
Score = 128 (50.1 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 82/340 (24%), Positives = 132/340 (38%)
Query: 136 SAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP-SDKRAGEEVVKRRKTSSAREESENPAS 194
SA++T A S Q++ G P D +A E +++ S RE+SE+
Sbjct: 309 SAQITSS--DAMSSQQNVMGTTEISSARNIPSYPDTQAVNEYLRKLSDHSVREDSEH--- 363
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAA-GGRHTLILSDMXXXXXXXXXXXXXXXXXSRIKMV 253
G++ P L P + + ++L++S S K++
Sbjct: 364 GEKPVPSQPLLEEAIPNLHSPPTTSTSALNSLVVS-CASAVGVRVAATYEAGALSLKKVM 422
Query: 254 PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTF 313
PC A +G + +G +S VK+ + G+ S+ + D T
Sbjct: 423 NFYSTTPCETGAQAGSSA--IGPEGLKDSR----EEQVKQESMQGKKSSSLVDIREEETE 476
Query: 314 GWG----LYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQ 369
G L G S LR + + + +G + S+ V+ +G +
Sbjct: 477 GGSRRLSLPGLLSQVSPR-LLRKAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGK 535
Query: 370 FGQLGTGVDQAENVPKL--LETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQL 427
GQLG G + +P+L L L+ K + G HS LT QV SWG N +GQL
Sbjct: 536 EGQLGHG----DVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSNTFGQL 591
Query: 428 GLGDSIDRNIPSLVPI---HGFLPRNIACGWWHTLLLAET 464
G D +P L I +G +IA G ++L L +T
Sbjct: 592 GHSD-FPTTVPRLAKISSENGVW--SIAAGRDYSLFLVDT 628
Score = 89 (36.4 bits), Expect = 8.5e-09, Sum P(2) = 8.5e-09
Identities = 47/152 (30%), Positives = 67/152 (44%)
Query: 88 SGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG---WR----ECVPSAKVT 140
+G TPE P +V++AA G H V +TE GEVY++G WR E PS+ +
Sbjct: 25 AGSFPITPERLPGWGGKTVLQAALGVKHGVLLTEDGEVYSFGTLPWRSGPVEICPSSPIL 84
Query: 141 RDFGSAGSFQKD-STGK-QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE-NPAS-GD 196
+ G + +TG S T+ GE + ++ + E NP S D
Sbjct: 85 EN-ALVGQYVITVATGSFHSGAVTDNGVAY--MWGENSAGQCAVANQQYVPEPNPVSIAD 141
Query: 197 EFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
SP L V+I ++A G HTL LS
Sbjct: 142 S--EASPLLA-----VRILQLACGEEHTLALS 166
Score = 76 (31.8 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 30/116 (25%), Positives = 52/116 (44%)
Query: 22 VYMWGYLPGTS-PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADD 80
VY +G LP S P + SPI G V G A +++G WG +
Sbjct: 62 VYSFGTLPWRSGPVEICPSSPILENALVGQYVITVATGSFHSG-AVTDNGVAYMWGE-NS 119
Query: 81 EGQSYLTSGKHGETPEPFPLP-TEAS------VVKAAAGWAHCVSVTEAGEVYTWG 129
GQ + + ++ P P + +EAS +++ A G H ++++ + E++ WG
Sbjct: 120 AGQCAVANQQYVPEPNPVSIADSEASPLLAVRILQLACGEEHTLALSISREIWAWG 175
>ZFIN|ZDB-GENE-080929-1 [details] [associations]
symbol:als2b "amyotrophic lateral sclerosis 2b
(juvenile)" species:7955 "Danio rerio" [GO:0035023 "regulation of
Rho protein signal transduction" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005089 "Rho guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0005543 "phospholipid
binding" evidence=IEA] InterPro:IPR000219 InterPro:IPR001849
Pfam:PF00621 PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408
Pfam:PF00415 Pfam:PF02204 ZFIN:ZDB-GENE-080929-1 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622 GO:GO:0005089
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
GeneTree:ENSGT00600000084242 KO:K04575 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 EMBL:CU570787 EMBL:BX927225
EMBL:CU915284 IPI:IPI01024580 RefSeq:XP_002662342.2
UniGene:Dr.158633 Ensembl:ENSDART00000149896 GeneID:100318899
KEGG:dre:100318899 CTD:100318899 Uniprot:F8W4K3
Length = 1681
Score = 149 (57.5 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 50/142 (35%), Positives = 71/142 (50%)
Query: 338 LMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRA 397
L+ V Q A G H V + G+VY FG+L +Q + +LE +L +R
Sbjct: 35 LLSRPVLQAALGARHGVLLVEGGQVY-----SFGELPWKQNQTSSAEPILEA-VLSEQRV 88
Query: 398 KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL-GDSIDRNIPSLVPIHGFL------PRN 450
V+ G+ HS V+TEDG V WG N +GQ GL G S+ IP+ P+ G L P+
Sbjct: 89 VFVAAGSAHSGVVTEDGGVHMWGENVHGQCGLLGLSV---IPNPTPV-GVLDSEATPPQT 144
Query: 451 I-----ACGWWHTLLLAETTQI 467
+ ACG HTL L+ ++
Sbjct: 145 VKILEVACGDQHTLALSAKHEV 166
Score = 143 (55.4 bits), Expect = 1.2e-08, Sum P(4) = 1.2e-08
Identities = 42/110 (38%), Positives = 55/110 (50%)
Query: 357 SVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI--LESKRAKVVSCGARHSAVLTEDG 414
S++ V+ +G Q GQLG G + +P+L + L K V+ GA HS LT
Sbjct: 546 SLQTEVWSWGQGQDGQLGHG----DLLPRLQPDCVKSLNGKEVLKVAAGAHHSLALTAQS 601
Query: 415 QVLSWGWNKYGQLGLGDSIDRNIPSLVPIH-GFLPRNIACGWWHTLLLAE 463
QV SWG N GQLG +S P L + G +I G HTLLLA+
Sbjct: 602 QVFSWGCNTSGQLGHMES-PTTFPQLTKLSDGIRVWDIGAGLQHTLLLAD 650
Score = 138 (53.6 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 49/178 (27%), Positives = 83/178 (46%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
V + A G RH ++ + G + +FG + Q + P + L + +V +AAG
Sbjct: 40 VLQAALGARHGVLLVEGGQVYSFGELPWKQ----NQTSSAEPILEAVLSEQRVVFVAAGS 95
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGT-GVDQAEN-VPK-LLETPILESKRAKV--VSCGAR 405
H+ ++ +G V+++G N GQ G G+ N P +L++ + K+ V+CG +
Sbjct: 96 AHSGVVTEDGGVHMWGENVHGQCGLLGLSVIPNPTPVGVLDSEATPPQTVKILEVACGDQ 155
Query: 406 HSAVLTEDGQVLSWGWNKYGQLGLGDS-IDRNIPSLVP-IHGFLPRNIACGWWHTLLL 461
H+ L+ +V W W QLGL S P V + G +ACG H++ L
Sbjct: 156 HTLALSAKHEV--WAWGSGCQLGLNTSTFPVWKPQKVDHLSGRHVLQVACGSAHSVAL 211
Score = 130 (50.8 bits), Expect = 2.9e-07, Sum P(4) = 2.9e-07
Identities = 32/106 (30%), Positives = 57/106 (53%)
Query: 312 TFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
++G G GQ GHG +L+P SL +V ++AAG H++ ++ + +V+ +G N G
Sbjct: 553 SWGQGQDGQLGHGDLLPRLQPDCVKSLNGKEVLKVAAGAHHSLALTAQSQVFSWGCNTSG 612
Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVL 417
QLG ++ P+L T + + R + G +H+ +L DG +
Sbjct: 613 QLGH-MESPTTFPQL--TKLSDGIRVWDIGAGLQHTLLLA-DGDCI 654
Score = 66 (28.3 bits), Expect = 1.2e-08, Sum P(4) = 1.2e-08
Identities = 31/110 (28%), Positives = 50/110 (45%)
Query: 21 VVYMW-GYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSAD 79
+++ W GY T+PE+ + P+ + G G L E G++ ++G
Sbjct: 18 LLHTWKGYSYSTAPERVLLSRPV---------LQAALGARHGVLLV--EGGQVYSFGELP 66
Query: 80 DEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ Q+ +S + P + +E VV AAG AH VTE G V+ WG
Sbjct: 67 WK-QNQTSSAE----PILEAVLSEQRVVFVAAGSAHSGVVTEDGGVHMWG 111
Score = 64 (27.6 bits), Expect = 2.0e-07, Sum P(3) = 2.0e-07
Identities = 30/115 (26%), Positives = 46/115 (40%)
Query: 22 VYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDE 81
VY +G LP + S PI + V G + T E G + WG +
Sbjct: 59 VYSFGELPWKQNQTSSA-EPILEAVLSEQRVVFVAAGSAHSGVVT-EDGGVHMWGE-NVH 115
Query: 82 GQSYLTSGKHGETPEPFP-LPTEAS------VVKAAAGWAHCVSVTEAGEVYTWG 129
GQ L P P L +EA+ +++ A G H ++++ EV+ WG
Sbjct: 116 GQCGLLGLSVIPNPTPVGVLDSEATPPQTVKILEVACGDQHTLALSAKHEVWAWG 170
Score = 51 (23.0 bits), Expect = 1.2e-08, Sum P(4) = 1.2e-08
Identities = 11/17 (64%), Positives = 13/17 (76%)
Query: 212 VKITKVAAGGRHTLILS 228
VKI +VA G +HTL LS
Sbjct: 145 VKILEVACGDQHTLALS 161
Score = 43 (20.2 bits), Expect = 1.2e-08, Sum P(4) = 1.2e-08
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 286 AGRSYVKEIACGGRHSAVV 304
+GR +V ++ACG HS +
Sbjct: 194 SGR-HVLQVACGSAHSVAL 211
Score = 41 (19.5 bits), Expect = 2.0e-07, Sum P(3) = 2.0e-07
Identities = 16/48 (33%), Positives = 22/48 (45%)
Query: 153 STGKQSALPTEQAPP------SDKRAGEEVVKRRKTSSAREESENPAS 194
S+GK S P EQA SD E +K T + + S +PA+
Sbjct: 366 SSGK-SPYPDEQAVKAYLKRLSDHALAEHTIKTSSTIHSAQLSGDPAN 412
Score = 37 (18.1 bits), Expect = 9.8e-05, Sum P(3) = 9.8e-05
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGK 285
P L+ A + LLV G V S G+
Sbjct: 39 PVLQAALGARHGVLLVEGGQVYSFGE 64
>FB|FBgn0000247 [details] [associations]
symbol:ca "claret" species:7227 "Drosophila melanogaster"
[GO:0006727 "ommochrome biosynthetic process" evidence=IMP]
[GO:0006856 "eye pigment precursor transport" evidence=TAS]
[GO:0017137 "Rab GTPase binding" evidence=IPI] [GO:0005622
"intracellular" evidence=IDA] [GO:0008057 "eye pigment granule
organization" evidence=IMP] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IPI] [GO:0017112 "Rab guanyl-nucleotide
exchange factor activity" evidence=IPI] [GO:0060967 "negative
regulation of gene silencing by RNA" evidence=IMP]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE014297 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PROSITE:PS50012 GO:GO:0008057
GO:GO:0060967 GO:GO:0006727 GO:GO:0006856
GeneTree:ENSGT00700000104208 FlyBase:FBgn0000247 EMBL:BT057978
RefSeq:NP_733309.3 UniGene:Dm.6851 SMR:Q9VAG5 MINT:MINT-1644098
STRING:Q9VAG5 EnsemblMetazoa:FBtr0085484 GeneID:43518
KEGG:dme:Dmel_CG31037 UCSC:CG31037-RA CTD:43518 InParanoid:Q9VAG5
OMA:DNTLHIV GenomeRNAi:43518 NextBio:834351 Uniprot:Q9VAG5
Length = 1961
Score = 168 (64.2 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 56/183 (30%), Positives = 82/183 (44%)
Query: 289 SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGS---TNDQLRPSYASSLMDI---- 341
S K I+ G + A V D A + WG G + S + + P++A +D+
Sbjct: 1115 SRFKPISAGCAYCACVVDGTA---YFWGSSGIPSYYSAQKSTEPPEPAHAVKSLDLLSQL 1171
Query: 342 --QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKV 399
QV I G HT+ ++ G +Y G N QLG G + +L T L+ +
Sbjct: 1172 NLQVHAIKCGRQHTLILTNNG-LYSLGNNNLCQLGIGRHMQMALQPMLVTA-LDGMNITM 1229
Query: 400 VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLP-RNIACGWWHT 458
+ G H+A + DG++ WGW YGQLG G + P LV F I+ G HT
Sbjct: 1230 LEAGQYHNAAVA-DGKLYMWGWGIYGQLGQGSCENIATPQLVSFFKFKKILQISLGHAHT 1288
Query: 459 LLL 461
L+L
Sbjct: 1289 LVL 1291
Score = 146 (56.5 bits), Expect = 4.0e-07, Sum P(3) = 4.0e-07
Identities = 51/161 (31%), Positives = 73/161 (45%)
Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHT 353
+ G H+A V D G L +GWG+YGQ G GS + P S ++ QI+ G HT
Sbjct: 1230 LEAGQYHNAAVAD-GKLYMWGWGIYGQLGQGSCENIATPQLVSFFKFKKILQISLGHAHT 1288
Query: 354 VCIS------VEGR-----VYVFGGNQFGQLGTG-VDQAENVPKLLETPILESKRAKVVS 401
+ + +E ++VFG N FGQLGTG D + L P+ R +V
Sbjct: 1289 LVLCGAPNSHMEANHCGNELFVFGSNHFGQLGTGNSDHGDTKTNL---PV----RLEVGD 1341
Query: 402 CGAR--HSAVLT-----EDGQVLSWGWNKYGQLGLGDSIDR 435
C R H+ T E ++ +WG + L L + I R
Sbjct: 1342 CSLRLIHTKFFTNLAVDEQDRLFTWGSSPQA-LRLANQIKR 1381
Score = 144 (55.7 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 46/165 (27%), Positives = 83/165 (50%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQ-LRPSYASSLMDIQVEQIAAG 349
V I CG +H+ ++T+ G L + G Q G G L+P ++L + + + AG
Sbjct: 1175 VHAIKCGRQHTLILTNNG-LYSLGNNNLCQLGIGRHMQMALQPMLVTALDGMNITMLEAG 1233
Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENV--PKLLE----TPILESKRAK---VV 400
+H ++ +G++Y++G +GQLG G EN+ P+L+ IL+ +V
Sbjct: 1234 QYHNAAVA-DGKLYMWGWGIYGQLGQG--SCENIATPQLVSFFKFKKILQISLGHAHTLV 1290
Query: 401 SCGARHSAVLTED--GQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
CGA +S + ++ +G N +GQLG G+S + + +P+
Sbjct: 1291 LCGAPNSHMEANHCGNELFVFGSNHFGQLGTGNSDHGDTKTNLPV 1335
Score = 126 (49.4 bits), Expect = 3.3e-05, Sum P(4) = 3.3e-05
Identities = 34/96 (35%), Positives = 52/96 (54%)
Query: 342 QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVS 401
++ QI++GL+H IS +Y +G N QLGT + + L +PI +R V
Sbjct: 1502 RILQISSGLFHFCLISSSCTLYTWGKNLEHQLGT--EDKDRRAVLKPSPIDSIERPMYVD 1559
Query: 402 CGARHSAVLTEDGQVLSWGWNKYGQLG--LGDSIDR 435
CG+ + V+T D V ++G N GQ G LG S++R
Sbjct: 1560 CGSDFTLVMTTDHVVRAFGGNSNGQCGRDLGPSVER 1595
Score = 53 (23.7 bits), Expect = 4.0e-07, Sum P(3) = 4.0e-07
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSD 229
L P LVT G+ IT + AG H ++D
Sbjct: 1214 LQPMLVTALDGMNITMLEAGQYHNAAVAD 1242
Score = 52 (23.4 bits), Expect = 3.3e-05, Sum P(4) = 3.3e-05
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 105 SVVKAAAGWAHCVSVTEAGEVYTWGW 130
++ AG H +V + G++Y WGW
Sbjct: 1226 NITMLEAGQYHNAAVAD-GKLYMWGW 1250
Score = 50 (22.7 bits), Expect = 4.0e-07, Sum P(3) = 4.0e-07
Identities = 13/39 (33%), Positives = 18/39 (46%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
GC + + G WGS+ SY ++ K E PEP
Sbjct: 1123 GCAYCACVVD-GTAYFWGSSGIP--SYYSAQKSTEPPEP 1158
Score = 49 (22.3 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 19/78 (24%), Positives = 32/78 (41%)
Query: 55 VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAA 111
+CG A +L +GS + GQ + HG+T P+ E S+
Sbjct: 1291 LCGAPNSHMEANHCGNELFVFGS-NHFGQLGTGNSDHGDTKTNLPVRLEVGDCSLRLIHT 1349
Query: 112 GWAHCVSVTEAGEVYTWG 129
+ ++V E ++TWG
Sbjct: 1350 KFFTNLAVDEQDRLFTWG 1367
Score = 44 (20.5 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 14/46 (30%), Positives = 25/46 (54%)
Query: 184 SAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
SA++ +E P +L L LN +++ + G +HTLIL++
Sbjct: 1148 SAQKSTEPPEPAHAVKSLD-LLSQLN--LQVHAIKCGRQHTLILTN 1190
Score = 44 (20.5 bits), Expect = 3.3e-05, Sum P(4) = 3.3e-05
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLIL 227
+P LV+ KI +++ G HTL+L
Sbjct: 1266 TPQLVSFFKFKKILQISLGHAHTLVL 1291
>UNIPROTKB|E9PS70 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058
EMBL:AC124078 IPI:IPI00985461 ProteinModelPortal:E9PS70 SMR:E9PS70
Ensembl:ENST00000532389 ArrayExpress:E9PS70 Bgee:E9PS70
Uniprot:E9PS70
Length = 137
Score = 138 (53.6 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 45/133 (33%), Positives = 66/133 (49%)
Query: 303 VVTDAGALLTFGWGLYGQCG--HGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEG 360
++T+ G +L+ G +GQ G HG + P A L +V IAAGL H V + G
Sbjct: 1 MLTENGQVLSCGSNSFGQLGVPHGPRRCVV-PQ-AIELHKEKVVCIAAGLRHAVAATASG 58
Query: 361 RVYVFGGNQFGQLGTGVDQAENVPKLL--ETPI----LESKRAKVVSCGARHSAVLTEDG 414
V+ +G G + + +P + P LE+ +A V G+ HSA LT+ G
Sbjct: 59 IVFQWGTG-LASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAG 117
Query: 415 QVLSWGWNKYGQL 427
+V WG NK+GQL
Sbjct: 118 EVYVWGSNKHGQL 130
>ZFIN|ZDB-GENE-070402-2 [details] [associations]
symbol:als2a "amyotrophic lateral sclerosis 2a
(juvenile)" species:7955 "Danio rerio" [GO:0035023 "regulation of
Rho protein signal transduction" evidence=IEA] [GO:0005089 "Rho
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0043025 "neuronal
cell body" evidence=ISS] [GO:0030425 "dendrite" evidence=ISS]
[GO:0005769 "early endosome" evidence=ISS] [GO:0016197 "endosomal
transport" evidence=ISS] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=ISS] [GO:0005813 "centrosome" evidence=ISS]
[GO:0014069 "postsynaptic density" evidence=ISS] [GO:0007528
"neuromuscular junction development" evidence=ISS] [GO:0030424
"axon" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043197 "dendritic spine" evidence=ISS] [GO:0007409
"axonogenesis" evidence=ISS] [GO:0016050 "vesicle organization"
evidence=ISS] [GO:0017137 "Rab GTPase binding" evidence=ISS]
[GO:0017112 "Rab guanyl-nucleotide exchange factor activity"
evidence=ISS] InterPro:IPR000219 Pfam:PF00621 PROSITE:PS50010
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 ZFIN:ZDB-GENE-070402-2
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622 GO:GO:0005089
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:BK005193
UniGene:Dr.102729 ProteinModelPortal:I7L9G3 Uniprot:I7L9G3
Length = 1590
Score = 142 (55.0 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 40/105 (38%), Positives = 55/105 (52%)
Query: 362 VYVFGGNQFGQLGTGVDQAENVPKLLETPI--LESKRAKVVSCGARHSAVLTEDGQVLSW 419
V+ +G GQLG G + +P+L I L K ++ GA HS LT QV SW
Sbjct: 522 VWSWGKGHEGQLGHG----DYLPRLQPLCIKSLSKKEVVKITAGANHSLALTAQCQVYSW 577
Query: 420 GWNKYGQLGLGDSIDRNIPSLVPIH-GFLPRNIACGWWHTLLLAE 463
G K+GQLG +S +P+L + G ++A G HTLLLA+
Sbjct: 578 GSEKFGQLGRMNS-PSTVPNLTTVSDGIRVWDVAAGQTHTLLLAD 621
Score = 137 (53.3 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 50/183 (27%), Positives = 84/183 (45%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
V A G H ++ + G + +FG + + L S+L V ++AG
Sbjct: 34 VLHAALGSLHGLLLIEGGQVYSFGEQPWKPVEPPPASLVLE----STLSGQHVISVSAGS 89
Query: 351 WHTVCISVEGRVYVFGGNQFGQLG-TGVDQAEN-VPKLL---ETPILESKRAKVVSCGAR 405
+H ++ +G V ++G N +GQ G +G D+ + P + ET + R V+CGA+
Sbjct: 90 YHCSAVTEDGLVLMWGENSYGQCGVSGTDRVPSPTPVTVVDDETHPPQLVRVLNVACGAQ 149
Query: 406 HSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP--IHGFLPR---NIACGWWHTLL 460
H+ L+ +V W W QLGL ++ P P + + R IACG +H+L
Sbjct: 150 HTLALSNKHEV--WAWGSGCQLGLVTNV---FPVWKPQKVEHLVGRYVVQIACGAFHSLA 204
Query: 461 LAE 463
L +
Sbjct: 205 LVQ 207
Score = 135 (52.6 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 35/103 (33%), Positives = 56/103 (54%)
Query: 312 TFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
++G G GQ GHG +L+P SL +V +I AG H++ ++ + +VY +G +FG
Sbjct: 524 SWGKGHEGQLGHGDYLPRLQPLCIKSLSKKEVVKITAGANHSLALTAQCQVYSWGSEKFG 583
Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDG 414
QLG ++ VP L T + + R V+ G H+ +L DG
Sbjct: 584 QLGR-MNSPSTVPNL--TTVSDGIRVWDVAAGQTHTLLLA-DG 622
Score = 134 (52.2 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 46/140 (32%), Positives = 67/140 (47%)
Query: 338 LMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRA 397
L+ V A G H + + G+VY FG + + + +LE+ L +
Sbjct: 29 LLSRPVLHAALGSLHGLLLIEGGQVYSFGEQPWKPV-----EPPPASLVLEST-LSGQHV 82
Query: 398 KVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI-------HG-FLPR 449
VS G+ H + +TEDG VL WG N YGQ G+ + DR +PS P+ H L R
Sbjct: 83 ISVSAGSYHCSAVTEDGLVLMWGENSYGQCGVSGT-DR-VPSPTPVTVVDDETHPPQLVR 140
Query: 450 --NIACGWWHTLLLAETTQI 467
N+ACG HTL L+ ++
Sbjct: 141 VLNVACGAQHTLALSNKHEV 160
Score = 122 (48.0 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 39/131 (29%), Positives = 64/131 (48%)
Query: 290 YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMD-------IQ 342
+V ++ G H + VT+ G +L +G YGQCG T+ P+ + + D ++
Sbjct: 81 HVISVSAGSYHCSAVTEDGLVLMWGENSYGQCGVSGTDRVPSPTPVTVVDDETHPPQLVR 140
Query: 343 VEQIAAGLWHTVCISVEGRVYVFG-GNQFGQLGTGVDQAENVPKLLETPILESKRAKVVS 401
V +A G HT+ +S + V+ +G G Q G L T V P+ +E L + ++
Sbjct: 141 VLNVACGAQHTLALSNKHEVWAWGSGCQLG-LVTNVFPVWK-PQKVEH--LVGRYVVQIA 196
Query: 402 CGARHSAVLTE 412
CGA HS L +
Sbjct: 197 CGAFHSLALVQ 207
Score = 74 (31.1 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 28/115 (24%), Positives = 46/115 (40%)
Query: 22 VYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDE 81
VY +G P P + P S + G V G + A +E G ++ WG +
Sbjct: 53 VYSFGEQPW-KPVEPPPASLVLESTLSGQHVISVSAGSYHCS-AVTEDGLVLMWGE-NSY 109
Query: 82 GQSYLTSGKHGETPEPFPL-------PTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
GQ ++ +P P + P V+ A G H ++++ EV+ WG
Sbjct: 110 GQCGVSGTDRVPSPTPVTVVDDETHPPQLVRVLNVACGAQHTLALSNKHEVWAWG 164
Score = 68 (29.0 bits), Expect = 7.2e-08, Sum P(2) = 7.2e-08
Identities = 32/110 (29%), Positives = 45/110 (40%)
Query: 21 VVYMW-GYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSAD 79
V+Y W GY SPEK + P+ G + GG ++ + K + A
Sbjct: 12 VLYRWQGYFCSVSPEKLLLSRPVLHAALGSLHGLLLIEGGQVYSFG-EQPWKPVEPPPAS 70
Query: 80 DEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+S L SG+H V+ +AG HC +VTE G V WG
Sbjct: 71 LVLESTL-SGQH--------------VISVSAGSYHCSAVTEDGLVLMWG 105
Score = 61 (26.5 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 41/141 (29%), Positives = 58/141 (41%)
Query: 97 PFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG---WR--ECVPSAKVTRDFGSAGSFQK 151
P L V+ AA G H + + E G+VY++G W+ E P++ V S
Sbjct: 25 PEKLLLSRPVLHAALGSLHGLLLIEGGQVYSFGEQPWKPVEPPPASLVLESTLSGQHVIS 84
Query: 152 DSTGKQ--SALPTEQAPPSDKRAGEEVVKRRKTSSA-REESENPASGDEFFTLSPCLVTL 208
S G SA+ TE GE + S R S P + + T P LV
Sbjct: 85 VSAGSYHCSAV-TEDGLVL--MWGENSYGQCGVSGTDRVPSPTPVTVVDDETHPPQLV-- 139
Query: 209 NPGVKITKVAAGGRHTLILSD 229
++ VA G +HTL LS+
Sbjct: 140 ----RVLNVACGAQHTLALSN 156
Score = 56 (24.8 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 18/54 (33%), Positives = 24/54 (44%)
Query: 415 QVLSWGWNKYGQLGLGDSIDRNIPSLVP-IHGFLPRNIACGWWHTLLLAETTQI 467
+V SWG GQLG GD + R P + + I G H+L L Q+
Sbjct: 521 EVWSWGKGHEGQLGHGDYLPRLQPLCIKSLSKKEVVKITAGANHSLALTAQCQV 574
>WB|WBGene00004304 [details] [associations]
symbol:ran-3 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0051301 "cell division" evidence=IMP] [GO:0000910
"cytokinesis" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0016246 "RNA interference" evidence=IMP] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0009792 GO:GO:0040010
GO:GO:0007067 GO:GO:0007052 GO:GO:0002119 GO:GO:0016246
GO:GO:0000910 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 GO:GO:0040035 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184 EMBL:Z54327
GeneTree:ENSGT00700000104160 PIR:T19483 RefSeq:NP_495753.1
ProteinModelPortal:Q18211 SMR:Q18211 IntAct:Q18211 STRING:Q18211
PaxDb:Q18211 EnsemblMetazoa:C26D10.1.1 EnsemblMetazoa:C26D10.1.2
GeneID:174332 KEGG:cel:CELE_C26D10.1 UCSC:C26D10.1 CTD:174332
WormBase:C26D10.1 HOGENOM:HOG000016067 InParanoid:Q18211
OMA:TEPNDVE NextBio:883582 Uniprot:Q18211
Length = 569
Score = 160 (61.4 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 100/396 (25%), Positives = 158/396 (39%)
Query: 107 VKAAAGWAHCVSVTEAGEVYTWGWRE--CVPSAKVTRDFGSAGSFQK----DSTGKQSAL 160
++A AG H +T GEVY G E VP+ V ++ GS F K + K+ +
Sbjct: 188 LQAVAGGVHSAVLTSEGEVYMCGINEKGTVPAEGVEKE-GSTDEFAKVKFEEDIEKEGKI 246
Query: 161 PTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTL--SPCLVTLNPGVKITKVA 218
A S A + + R + N + +P ++ KI K+A
Sbjct: 247 VMLAAGASFTAALTDQGSVIAWGNLRNSNGNVDVHPLLHKMQEAPVVIVHQAKRKIVKIA 306
Query: 219 AGGRHTLILSDMXXXXXXXXXXXXXXXXXSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG 278
AG H ++L + SR K + + ++ C E SG D LLV
Sbjct: 307 AGENHLVMLDEKGCLLTFGDGEMGQLGRSSRTKTIRSKYM--CDE---SG-DH-LLVPL- 358
Query: 279 SVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCG----------HGSTND 328
GK K + G + V + G FG Y Q G G N
Sbjct: 359 RFKHKGKFFDVVAKNVFASGFWTIVHGEDGKYYAFGLNNYAQLGIKVDEADVGQDGQDNR 418
Query: 329 QLR-------PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG----TGV 377
+LR P++ + + +E G+ H V + +G+V+ G N LG TG
Sbjct: 419 ELRVFLPAEAPAFGAERTFVNIE----GVQHVVILGSDGKVFAMGKNTDNALGLGNWTGK 474
Query: 378 DQAENVPKLLETPILESK-RAKVVSCGAR--HSAVLTEDGQVLSWGWNKYGQLGLG--DS 432
D ++ L +T I E + +K+V A+ S +EDG +WG++ GQLGLG D
Sbjct: 475 DDQQHW--LYDT-IQEIEFDSKIVGVSAKLATSIAWSEDGTAYAWGFDTTGQLGLGLKDE 531
Query: 433 IDRNI--P---SLVPIHGFLPRNIACGWWHTLLLAE 463
++ + P S + G+ + HTL++A+
Sbjct: 532 DEKMVSKPEEISSAHLDGYSIIGASISDQHTLIIAK 567
>FB|FBgn0030600 [details] [associations]
symbol:hiw "highwire" species:7227 "Drosophila melanogaster"
[GO:0008582 "regulation of synaptic growth at neuromuscular
junction" evidence=IMP;TAS] [GO:0016023 "cytoplasmic
membrane-bounded vesicle" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0007628 "adult walking behavior"
evidence=NAS] [GO:0040011 "locomotion" evidence=NAS] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0030514 "negative regulation
of BMP signaling pathway" evidence=IGI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0045886 "negative regulation of synaptic
growth at neuromuscular junction" evidence=IMP] [GO:0030509 "BMP
signaling pathway" evidence=IPI] [GO:0016567 "protein
ubiquitination" evidence=ISS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0006914 "autophagy" evidence=IDA]
[GO:0050808 "synapse organization" evidence=IDA] InterPro:IPR001841
InterPro:IPR027047 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415 Prosite:PS00518
GO:GO:0005886 GO:GO:0005634 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0046872 EMBL:AE014298 GO:GO:0008270 GO:GO:0006914
GO:GO:0040011 GO:GO:0050808 GO:GO:0006351 GO:GO:0016023
GO:GO:0045886 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0030509 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
GO:GO:0007628 eggNOG:COG5184 GO:GO:0030514 InterPro:IPR012983
Pfam:PF08005 InterPro:IPR017868 PROSITE:PS50194 EMBL:AF262977
EMBL:AY113376 RefSeq:NP_511159.3 UniGene:Dm.3259
ProteinModelPortal:Q9NB71 SMR:Q9NB71 IntAct:Q9NB71 STRING:Q9NB71
EnsemblMetazoa:FBtr0073970 GeneID:32429 KEGG:dme:Dmel_CG32592
UCSC:CG32592-RA CTD:32429 FlyBase:FBgn0030600
GeneTree:ENSGT00390000011403 InParanoid:Q9NB71 KO:K10693
OMA:DAQCQEY OrthoDB:EOG4ZPC91 PhylomeDB:Q9NB71 ChiTaRS:hiw
GenomeRNAi:32429 NextBio:778423 Bgee:Q9NB71 GermOnline:CG32592
PANTHER:PTHR12846 Uniprot:Q9NB71
Length = 5233
Score = 162 (62.1 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 38/99 (38%), Positives = 55/99 (55%)
Query: 330 LRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLET 389
L P V Q+A GL HTV +++ G VY FG NQ+GQLG+G Q + P ++
Sbjct: 955 LAPQLLQLTSSSPVVQVACGLHHTVVLTLAGEVYTFGSNQYGQLGSGDLQPVSGPVRVQV 1014
Query: 390 PILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLG 428
P S+ V+ G+ H+ +LT G V ++G + GQLG
Sbjct: 1015 PGAISQ----VAAGSNHTVLLTSKGMVYTFGNYQKGQLG 1049
Score = 153 (58.9 bits), Expect = 5.4e-07, Sum P(3) = 5.4e-07
Identities = 37/88 (42%), Positives = 50/88 (56%)
Query: 289 SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQ--VEQI 346
S V ++ACG H+ V+T AG + TFG YGQ G G L+P + + + Q+
Sbjct: 966 SPVVQVACGLHHTVVLTLAGEVYTFGSNQYGQLGSGD----LQPVSGPVRVQVPGAISQV 1021
Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLG 374
AAG HTV ++ +G VY FG Q GQLG
Sbjct: 1022 AAGSNHTVLLTSKGMVYTFGNYQKGQLG 1049
Score = 123 (48.4 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 31/78 (39%), Positives = 46/78 (58%)
Query: 384 PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
P+LL+ + S V+CG H+ VLT G+V ++G N+YGQLG GD + P V +
Sbjct: 957 PQLLQ--LTSSSPVVQVACGLHHTVVLTLAGEVYTFGSNQYGQLGSGDLQPVSGPVRVQV 1014
Query: 444 HGFLPRNIACGWWHTLLL 461
G + + +A G HT+LL
Sbjct: 1015 PGAISQ-VAAGSNHTVLL 1031
Score = 90 (36.7 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 26/84 (30%), Positives = 40/84 (47%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
V AC SA VT G L+ +G C D + + S L++ V ++A G
Sbjct: 709 VVHAACNNGTSAFVTKTGKLIMYGKDT-AHC------DAM--GFVSELLEQHVTKVALGK 759
Query: 351 WHTVCISVEGRVYVFGGNQFGQLG 374
H V ++ +G+++ FG N GQ G
Sbjct: 760 AHCVALNAKGQLFSFGLNNKGQCG 783
Score = 63 (27.2 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWG 129
E V K A G AHCV++ G+++++G
Sbjct: 749 EQHVTKVALGKAHCVALNAKGQLFSFG 775
Score = 44 (20.5 bits), Expect = 5.4e-07, Sum P(3) = 5.4e-07
Identities = 12/57 (21%), Positives = 23/57 (40%)
Query: 381 ENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI 437
+N+P E P+L+ + + V D WG++ + + S D +I
Sbjct: 1407 DNIPGCFEQPLLKQTQQTAETQAGEFQVVNRFDNFGGGWGYSGHSVEAIRFSADTDI 1463
>RGD|1310372 [details] [associations]
symbol:Als2 "amyotrophic lateral sclerosis 2 (juvenile)"
species:10116 "Rattus norvegicus" [GO:0001662 "behavioral fear
response" evidence=IEA;ISO] [GO:0001701 "in utero embryonic
development" evidence=IEP] [GO:0001726 "ruffle" evidence=IEA;ISO]
[GO:0001881 "receptor recycling" evidence=IEA;ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=ISO;ISS] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0005769 "early endosome" evidence=ISO;ISS]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=ISO;ISS] [GO:0006979 "response to oxidative stress"
evidence=IEA;ISO] [GO:0007032 "endosome organization" evidence=ISO]
[GO:0007409 "axonogenesis" evidence=IMP] [GO:0007528 "neuromuscular
junction development" evidence=IEA;ISO] [GO:0007626 "locomotory
behavior" evidence=IEA;ISO] [GO:0008104 "protein localization"
evidence=IEA;ISO] [GO:0008219 "cell death" evidence=IMP]
[GO:0014069 "postsynaptic density" evidence=IEA;ISO] [GO:0016020
"membrane" evidence=IDA] [GO:0016050 "vesicle organization"
evidence=IEA;ISO] [GO:0016197 "endosomal transport"
evidence=IEA;ISO] [GO:0016601 "Rac protein signal transduction"
evidence=IDA] [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=ISO;ISS] [GO:0017137 "Rab GTPase binding"
evidence=ISO;ISS] [GO:0030027 "lamellipodium" evidence=IEA;ISO]
[GO:0030424 "axon" evidence=IDA] [GO:0030425 "dendrite"
evidence=ISO;ISS;IDA] [GO:0030426 "growth cone" evidence=IDA]
[GO:0030676 "Rac guanyl-nucleotide exchange factor activity"
evidence=ISO;ISS] [GO:0031982 "vesicle" evidence=ISO;ISS]
[GO:0032313 "regulation of Rab GTPase activity" evidence=IEA;ISO]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=ISO;ISS] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IEA;ISO] [GO:0042803 "protein
homodimerization activity" evidence=ISO;ISS] [GO:0043005 "neuron
projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0043197 "dendritic spine" evidence=ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] [GO:0043234 "protein complex" evidence=ISO;ISS]
[GO:0043539 "protein serine/threonine kinase activator activity"
evidence=ISO;ISS] [GO:0045860 "positive regulation of protein
kinase activity" evidence=ISO;ISS] [GO:0048812 "neuron projection
morphogenesis" evidence=ISO;ISS] [GO:0051036 "regulation of
endosome size" evidence=ISO;ISS] [GO:0071902 "positive regulation
of protein serine/threonine kinase activity" evidence=ISO]
InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621 PROSITE:PS00741
PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233 RGD:1310372
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 GO:GO:0005829
GO:GO:0005813 GO:GO:0043234 GO:GO:0042803 GO:GO:0014069
GO:GO:0008104 GO:GO:0006979 GO:GO:0016020 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0008219 GO:GO:0030424
GO:GO:0043025 GO:GO:0030425 GO:GO:0007528 GO:GO:0001701
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0016197
GO:GO:0030426 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0007409 GO:GO:0016601
eggNOG:COG4642 InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493
SMART:SM00698 PROSITE:PS51205 GeneTree:ENSGT00600000084242
CTD:57679 HOVERGEN:HBG037320 KO:K04575 OrthoDB:EOG4FTVZP
GO:GO:0005769 GO:GO:0031982 GO:GO:0017137 GO:GO:0017112
GO:GO:0030676 GO:GO:0001662 GO:GO:0032855 GO:GO:0001881
GO:GO:0051036 GO:GO:0032313 GO:GO:0016050 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
HOGENOM:HOG000033908 EMBL:AABR03068212 EMBL:BK005190
IPI:IPI00366955 RefSeq:NP_001013431.1 UniGene:Rn.219733
ProteinModelPortal:P0C5Y8 STRING:P0C5Y8 PhosphoSite:P0C5Y8
Ensembl:ENSRNOT00000035209 GeneID:363235 KEGG:rno:363235
UCSC:RGD:1310372 InParanoid:P0C5Y8 NextBio:682932
Genevestigator:P0C5Y8 Uniprot:P0C5Y8
Length = 1651
Score = 142 (55.0 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 50/190 (26%), Positives = 85/190 (44%)
Query: 284 GKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQV 343
G G++ V + A G +H ++T+ G + +FG + + P S+L+ V
Sbjct: 37 GWGGKT-VLQAALGVKHGVLLTEDGEVYSFGTLPWKS--EAAEICPSSPLLESALVGHHV 93
Query: 344 EQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL-----ETPILESKRAK 398
+A G +H+ ++ G VY++G N GQ Q + P + ET L + R
Sbjct: 94 VTVATGSFHSGAVTESGVVYMWGENAAGQCAVANQQYVSEPSPVSISDSETSPLLAVRIL 153
Query: 399 VVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-----IHGFLPRNIAC 453
++CG H+ L+ ++ W W QLGL I P P + G + +AC
Sbjct: 154 QLACGEEHTLALSISREI--WAWGTGCQLGL---ITTTFPVTKPQKVEHLAGRVVLQVAC 208
Query: 454 GWWHTLLLAE 463
G +H+L L +
Sbjct: 209 GAFHSLALVQ 218
Score = 121 (47.7 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 50/166 (30%), Positives = 74/166 (44%)
Query: 263 EHAASGKDR---PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALL-------- 311
E + G R P L+ Q S KA R + + +S +A ALL
Sbjct: 467 EESEGGSRRLSLPGLLSQVSPRLLRKAARVKTRTVVLTPTYSG---EADALLPSLRTEVW 523
Query: 312 TFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
T+G G GQ GHG +L+P L +V + AG H++ ++ + +VY +G N FG
Sbjct: 524 TWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGSHSLALTAKSQVYSWGSNTFG 583
Query: 372 QLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL--TEDGQ 415
QLG + VP+L + + V+ G +S L TED Q
Sbjct: 584 QLGHS-EFPTTVPRL--SKVSSESGVWSVAAGHGYSLFLVDTEDFQ 626
Score = 115 (45.5 bits), Expect = 5.0e-07, Sum P(3) = 5.0e-07
Identities = 35/111 (31%), Positives = 53/111 (47%)
Query: 357 SVEGRVYVFGGNQFGQLGTGVDQAENVPKL--LETPILESKRAKVVSCGARHSAVLTEDG 414
S+ V+ +G + GQLG G + +P+L L L+ K + G HS LT
Sbjct: 517 SLRTEVWTWGKGKEGQLGHG----DVLPRLQPLCVKCLDGKEVIHLEAGGSHSLALTAKS 572
Query: 415 QVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPR-NIACGWWHTLLLAET 464
QV SWG N +GQLG + +P L + ++A G ++L L +T
Sbjct: 573 QVYSWGSNTFGQLGHSE-FPTTVPRLSKVSSESGVWSVAAGHGYSLFLVDT 622
Score = 93 (37.8 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 46/150 (30%), Positives = 66/150 (44%)
Query: 88 SGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG---WR----ECVPSAKVT 140
+G TPE P +V++AA G H V +TE GEVY++G W+ E PS+ +
Sbjct: 25 AGSFSLTPERLPGWGGKTVLQAALGVKHGVLLTEDGEVYSFGTLPWKSEAAEICPSSPLL 84
Query: 141 RDFGSAGSFQKDSTGK-QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE-NPASGDEF 198
+TG S TE GE + ++ + SE +P S +
Sbjct: 85 ESALVGHHVVTVATGSFHSGAVTESGVVY--MWGENAAGQCAVANQQYVSEPSPVSISDS 142
Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
T SP L V+I ++A G HTL LS
Sbjct: 143 ET-SPLLA-----VRILQLACGEEHTLALS 166
Score = 77 (32.2 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 31/117 (26%), Positives = 53/117 (45%)
Query: 22 VYMWGYLPGTSPEKSPIL--SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSAD 79
VY +G LP S E + I SP+ G V G A +ESG + WG +
Sbjct: 62 VYSFGTLPWKS-EAAEICPSSPLLESALVGHHVVTVATGSFHSG-AVTESGVVYMWGE-N 118
Query: 80 DEGQSYLTSGKHGETPEPFPLP-TEAS------VVKAAAGWAHCVSVTEAGEVYTWG 129
GQ + + ++ P P + +E S +++ A G H ++++ + E++ WG
Sbjct: 119 AAGQCAVANQQYVSEPSPVSISDSETSPLLAVRILQLACGEEHTLALSISREIWAWG 175
Score = 40 (19.1 bits), Expect = 5.0e-07, Sum P(3) = 5.0e-07
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 328 DQLRPSYASSLMDIQVEQIAAG 349
+ L+ +SSLMDI+ E+ G
Sbjct: 451 ESLQGKKSSSLMDIREEESEGG 472
>WB|WBGene00012370 [details] [associations]
symbol:W09G3.7 species:6239 "Caenorhabditis elegans"
[GO:0045132 "meiotic chromosome segregation" evidence=IMP]
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0045132 PRINTS:PR00633
PROSITE:PS50012 EMBL:AL032625 GeneTree:ENSGT00700000104312
EMBL:Z82080 EMBL:AL023854 RefSeq:NP_001021671.2
ProteinModelPortal:G5EEZ1 SMR:G5EEZ1 PRIDE:G5EEZ1
EnsemblMetazoa:W09G3.7a GeneID:173245 KEGG:cel:CELE_W09G3.7
CTD:173245 WormBase:W09G3.7a OMA:RKKVDCA NextBio:878861
Uniprot:G5EEZ1
Length = 404
Score = 144 (55.7 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 55/166 (33%), Positives = 82/166 (49%)
Query: 305 TDAGALLTFGWGLYGQCGHGSTND-QLRPS--YASSLMDIQ-VEQIAAGLWHTVCISVEG 360
++ G + +G YGQ G+T++ QL S A+SL I V+ + + V + G
Sbjct: 249 SENGEIFIWGQTEYGQAA-GATDEIQLNTSRHVANSLGPIICVDSTQSSV---VARNSRG 304
Query: 361 RVYVFGGNQFGQLGTGVDQAENV--PKLLETPILESKRAKVVSCGARHSAVLTEDGQVLS 418
V+V+G G LG G +AE++ P ++ P+ + K VS G + + EDG++
Sbjct: 305 NVFVWG---VGVLGMG-PEAESLKTPTQMDQPLFDGKMVTSVSAGNSCMSAINEDGRLFI 360
Query: 419 WGWNKYGQLGLGDSIDRNIPSLVPIHGFLP---RNIACGWWHTLLL 461
WG N+Y LGLG R L P FLP R A G H+L L
Sbjct: 361 WGENRYSSLGLGHQ-KRQ---LFPYQLFLPGDVRKAALGPDHSLFL 402
Score = 123 (48.4 bits), Expect = 0.00013, P = 0.00013
Identities = 43/155 (27%), Positives = 69/155 (44%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTN-DQLRPSYASSLMDIQ------V 343
+ EI+ G HS + T+ G + G +GQCG N D + S S L+ + +
Sbjct: 124 ILEISSGRAHSLIRTNLG-VFAIGDNNFGQCGRNPENMDYVVGSEESPLLPLSFPTSEPI 182
Query: 344 EQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCG 403
I + + + G V+ FG N+ GQ G + P + + SK KV G
Sbjct: 183 ISIHCSMDTSFVVDSSGAVFSFGLNEDGQCGNEAYGIQWEPAKVRGDVEGSKIQKV--SG 240
Query: 404 ARHSAVL-TEDGQVLSWGWNKYGQL-GLGDSIDRN 436
+ + + +E+G++ WG +YGQ G D I N
Sbjct: 241 STDTLLACSENGEIFIWGQTEYGQAAGATDEIQLN 275
Score = 52 (23.4 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 20/81 (24%), Positives = 37/81 (45%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL--PTEASVVKAAAGWAHCV-SV 119
+ SG + ++G +D GQ + +G EP + E S ++ +G + +
Sbjct: 192 SFVVDSSGAVFSFGLNED-GQC--GNEAYGIQWEPAKVRGDVEGSKIQKVSGSTDTLLAC 248
Query: 120 TEAGEVYTWGWRECVPSAKVT 140
+E GE++ WG E +A T
Sbjct: 249 SENGEIFIWGQTEYGQAAGAT 269
Score = 42 (19.8 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 7/21 (33%), Positives = 16/21 (76%)
Query: 210 PGVKITKVAAGGRHTLILSDM 230
PG +I ++++G H+LI +++
Sbjct: 120 PGDEILEISSGRAHSLIRTNL 140
Score = 41 (19.5 bits), Expect = 6.5e-07, Sum P(2) = 6.5e-07
Identities = 12/53 (22%), Positives = 21/53 (39%)
Query: 81 EGQSYLTSGKHGETPE-PFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
E Y+ + E+P P PT ++ V +G V+++G E
Sbjct: 158 ENMDYVVGSE--ESPLLPLSFPTSEPIISIHCSMDTSFVVDSSGAVFSFGLNE 208
>CGD|CAL0001436 [details] [associations]
symbol:ATS1 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0002098 "tRNA
wobble uridine modification" evidence=IEA] [GO:0000226 "microtubule
cytoskeleton organization" evidence=IEA] [GO:0007117 "budding cell
bud growth" evidence=IEA] INTERPRO:IPR000408 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:AACQ01000073 PRINTS:PR00633
PROSITE:PS00626 eggNOG:COG5184 KO:K15462 RefSeq:XP_716156.1
ProteinModelPortal:Q5A364 STRING:Q5A364 GeneID:3642213
KEGG:cal:CaO19.13757 CGD:CAL0062057 Uniprot:Q5A364
Length = 336
Score = 138 (53.6 bits), Expect = 8.6e-08, Sum P(2) = 8.6e-08
Identities = 45/177 (25%), Positives = 85/177 (48%)
Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCG--HGSTNDQLRPSYASSLMDIQVEQIAAGL 350
+IA GG H+ V+ D G + + G +GQCG G + + +DI + G
Sbjct: 47 KIAGGGNHTMVILDNGEVFSCGSNEFGQCGLPRGESLGVFHKVPGNDWLDI-----SCGW 101
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
++ + G VYV G G+LG G + E+ +L+ + ++ + ++ SC +H+ +
Sbjct: 102 EFSILVKRSGEVYVCGRGLKGELGLGKETPES--ELIYSTTVDGFK-EIKSC-MQHTIIQ 157
Query: 411 TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
T +G V WG ++ GQLG + P + G + ++ + G T + +T ++
Sbjct: 158 TTNGLV-GWGNSRKGQLGETEDKIMWTPKTLRF-GVVCKDFSLGREFTAIQTDTNRV 212
Score = 53 (23.7 bits), Expect = 8.6e-08, Sum P(2) = 8.6e-08
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 210 PGVKITKVAAGGRHTLILSD 229
PG K K+A GG HT+++ D
Sbjct: 42 PG-KPMKIAGGGNHTMVILD 60
>UNIPROTKB|Q5A364 [details] [associations]
symbol:ATS1 "Putative uncharacterized protein ATS1"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] INTERPRO:IPR000408
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
EMBL:AACQ01000073 PRINTS:PR00633 PROSITE:PS00626 eggNOG:COG5184
KO:K15462 RefSeq:XP_716156.1 ProteinModelPortal:Q5A364
STRING:Q5A364 GeneID:3642213 KEGG:cal:CaO19.13757 CGD:CAL0062057
Uniprot:Q5A364
Length = 336
Score = 138 (53.6 bits), Expect = 8.6e-08, Sum P(2) = 8.6e-08
Identities = 45/177 (25%), Positives = 85/177 (48%)
Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQCG--HGSTNDQLRPSYASSLMDIQVEQIAAGL 350
+IA GG H+ V+ D G + + G +GQCG G + + +DI + G
Sbjct: 47 KIAGGGNHTMVILDNGEVFSCGSNEFGQCGLPRGESLGVFHKVPGNDWLDI-----SCGW 101
Query: 351 WHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL 410
++ + G VYV G G+LG G + E+ +L+ + ++ + ++ SC +H+ +
Sbjct: 102 EFSILVKRSGEVYVCGRGLKGELGLGKETPES--ELIYSTTVDGFK-EIKSC-MQHTIIQ 157
Query: 411 TEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIACGWWHTLLLAETTQI 467
T +G V WG ++ GQLG + P + G + ++ + G T + +T ++
Sbjct: 158 TTNGLV-GWGNSRKGQLGETEDKIMWTPKTLRF-GVVCKDFSLGREFTAIQTDTNRV 212
Score = 53 (23.7 bits), Expect = 8.6e-08, Sum P(2) = 8.6e-08
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 210 PGVKITKVAAGGRHTLILSD 229
PG K K+A GG HT+++ D
Sbjct: 42 PG-KPMKIAGGGNHTMVILD 60
>GENEDB_PFALCIPARUM|MAL7P1.38 [details] [associations]
symbol:MAL7P1.38 "regulator of chromosome
condensation protein, putative" species:5833 "Plasmodium
falciparum" [GO:0005634 "nucleus" evidence=ISS] [GO:0003682
"chromatin binding" evidence=ISS] [GO:0030261 "chromosome
condensation" evidence=ISS] [GO:0007049 "cell cycle" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0003682
GO:GO:0007049 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0030261 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS50012
EMBL:AL844506 RefSeq:XP_002808773.1 ProteinModelPortal:C0H4M6
EnsemblProtists:MAL7P1.38:mRNA GeneID:2655211 KEGG:pfa:MAL7P1.38
EuPathDB:PlasmoDB:PF3D7_0711500 HOGENOM:HOG000283921
ProtClustDB:CLSZ2431811 Uniprot:C0H4M6
Length = 687
Score = 147 (56.8 bits), Expect = 9.4e-08, Sum P(2) = 9.4e-08
Identities = 43/165 (26%), Positives = 77/165 (46%)
Query: 292 KEIACGGRHSAVVTDAGALLTFGWG--LYGQCGHGSTNDQLRP-SYASSLMDIQVEQIAA 348
+ I CGG ++ V + +L +G G YG CG S ++ ++ L ++ Q+
Sbjct: 265 ENIYCGGNNTYVQLE-NSLDVYGIGRNAYGSCGVSSKDNIIKKFEKIQELSQKKINQLCG 323
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
G TVC+ +Y++G + LG D P L+ + K ++CG H
Sbjct: 324 GQSFTVCLLNNNDLYIWGNREI--LGMEYDDDAYSPLELDFFKKNNYTVKNITCGTDHCL 381
Query: 409 VLTEDGQVLSWGW--NKYGQLGLGDSIDRNIPSLVPIHGFLPRNI 451
VLT++G++ WG N++ + I++N PS + F+ + I
Sbjct: 382 VLTDNGKLFGWGTGGNEFDENTSLAVIEKNEPSEIDFFKFVKKMI 426
Score = 133 (51.9 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 33/115 (28%), Positives = 62/115 (53%)
Query: 329 QLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG-----TGVDQAENV 383
Q+ P+ +L + ++++ G HT+ + + ++Y FG N G LG +G+ E+
Sbjct: 28 QVNPTAIPNLPN-DIDEVICGSMHTIIKTTDDKLYSFGCNDMGVLGRKTYSSGIKDLEHS 86
Query: 384 PKLLETPILESKRAKVVSCGARHSAVLTEDGQV-LSWGWNKY-GQLGLGDSIDRN 436
P L+ + K ++CG H+A+L E+G+V ++ G+ Y G LGL ++N
Sbjct: 87 PTLINFTF--PSKIKKITCGDNHTAILLENGKVYITGGFRDYCGVLGLPSFGEKN 139
Score = 53 (23.7 bits), Expect = 9.4e-08, Sum P(2) = 9.4e-08
Identities = 24/85 (28%), Positives = 38/85 (44%)
Query: 55 VCGGGCGFALATSESGKLITWGSADDE--GQSYLTSG----KHGETPEPFPLPTEASVVK 108
+CG T + KL ++G D G+ +SG +H T F P++ + K
Sbjct: 45 ICGSMHTIIKTTDD--KLYSFGCNDMGVLGRKTYSSGIKDLEHSPTLINFTFPSK--IKK 100
Query: 109 AAAGWAHCVSVTEAGEVY-TWGWRE 132
G H + E G+VY T G+R+
Sbjct: 101 ITCGDNHTAILLENGKVYITGGFRD 125
Score = 52 (23.4 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 13/35 (37%), Positives = 17/35 (48%)
Query: 193 ASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL 227
+SG + SP L+ KI K+ G HT IL
Sbjct: 77 SSGIKDLEHSPTLINFTFPSKIKKITCGDNHTAIL 111
>UNIPROTKB|C0H4M6 [details] [associations]
symbol:MAL7P1.38 "Regulator of chromosome condensation,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0003682
"chromatin binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0007049 "cell cycle" evidence=ISS] [GO:0030261
"chromosome condensation" evidence=ISS] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0003682 GO:GO:0007049
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0030261
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS50012 EMBL:AL844506
RefSeq:XP_002808773.1 ProteinModelPortal:C0H4M6
EnsemblProtists:MAL7P1.38:mRNA GeneID:2655211 KEGG:pfa:MAL7P1.38
EuPathDB:PlasmoDB:PF3D7_0711500 HOGENOM:HOG000283921
ProtClustDB:CLSZ2431811 Uniprot:C0H4M6
Length = 687
Score = 147 (56.8 bits), Expect = 9.4e-08, Sum P(2) = 9.4e-08
Identities = 43/165 (26%), Positives = 77/165 (46%)
Query: 292 KEIACGGRHSAVVTDAGALLTFGWG--LYGQCGHGSTNDQLRP-SYASSLMDIQVEQIAA 348
+ I CGG ++ V + +L +G G YG CG S ++ ++ L ++ Q+
Sbjct: 265 ENIYCGGNNTYVQLE-NSLDVYGIGRNAYGSCGVSSKDNIIKKFEKIQELSQKKINQLCG 323
Query: 349 GLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSA 408
G TVC+ +Y++G + LG D P L+ + K ++CG H
Sbjct: 324 GQSFTVCLLNNNDLYIWGNREI--LGMEYDDDAYSPLELDFFKKNNYTVKNITCGTDHCL 381
Query: 409 VLTEDGQVLSWGW--NKYGQLGLGDSIDRNIPSLVPIHGFLPRNI 451
VLT++G++ WG N++ + I++N PS + F+ + I
Sbjct: 382 VLTDNGKLFGWGTGGNEFDENTSLAVIEKNEPSEIDFFKFVKKMI 426
Score = 133 (51.9 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 33/115 (28%), Positives = 62/115 (53%)
Query: 329 QLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG-----TGVDQAENV 383
Q+ P+ +L + ++++ G HT+ + + ++Y FG N G LG +G+ E+
Sbjct: 28 QVNPTAIPNLPN-DIDEVICGSMHTIIKTTDDKLYSFGCNDMGVLGRKTYSSGIKDLEHS 86
Query: 384 PKLLETPILESKRAKVVSCGARHSAVLTEDGQV-LSWGWNKY-GQLGLGDSIDRN 436
P L+ + K ++CG H+A+L E+G+V ++ G+ Y G LGL ++N
Sbjct: 87 PTLINFTF--PSKIKKITCGDNHTAILLENGKVYITGGFRDYCGVLGLPSFGEKN 139
Score = 53 (23.7 bits), Expect = 9.4e-08, Sum P(2) = 9.4e-08
Identities = 24/85 (28%), Positives = 38/85 (44%)
Query: 55 VCGGGCGFALATSESGKLITWGSADDE--GQSYLTSG----KHGETPEPFPLPTEASVVK 108
+CG T + KL ++G D G+ +SG +H T F P++ + K
Sbjct: 45 ICGSMHTIIKTTDD--KLYSFGCNDMGVLGRKTYSSGIKDLEHSPTLINFTFPSK--IKK 100
Query: 109 AAAGWAHCVSVTEAGEVY-TWGWRE 132
G H + E G+VY T G+R+
Sbjct: 101 ITCGDNHTAILLENGKVYITGGFRD 125
Score = 52 (23.4 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 13/35 (37%), Positives = 17/35 (48%)
Query: 193 ASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL 227
+SG + SP L+ KI K+ G HT IL
Sbjct: 77 SSGIKDLEHSPTLINFTFPSKIKKITCGDNHTAIL 111
>MGI|MGI:1921268 [details] [associations]
symbol:Als2 "amyotrophic lateral sclerosis 2 (juvenile)"
species:10090 "Mus musculus" [GO:0001662 "behavioral fear response"
evidence=IMP] [GO:0001726 "ruffle" evidence=IDA] [GO:0001881
"receptor recycling" evidence=IMP] [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0005089 "Rho
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0005097 "Rab GTPase activator activity" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0005769 "early endosome"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=ISO] [GO:0006979 "response to
oxidative stress" evidence=IMP] [GO:0007032 "endosome organization"
evidence=ISO] [GO:0007041 "lysosomal transport" evidence=ISO]
[GO:0007409 "axonogenesis" evidence=ISO] [GO:0007528 "neuromuscular
junction development" evidence=IMP] [GO:0007626 "locomotory
behavior" evidence=IMP] [GO:0008104 "protein localization"
evidence=IMP] [GO:0008219 "cell death" evidence=ISO] [GO:0014069
"postsynaptic density" evidence=IDA] [GO:0016020 "membrane"
evidence=ISO] [GO:0016050 "vesicle organization" evidence=IDA]
[GO:0016197 "endosomal transport" evidence=IMP] [GO:0016601 "Rac
protein signal transduction" evidence=ISO] [GO:0017112 "Rab
guanyl-nucleotide exchange factor activity" evidence=ISO]
[GO:0017137 "Rab GTPase binding" evidence=ISO] [GO:0030027
"lamellipodium" evidence=IDA] [GO:0030424 "axon" evidence=ISO]
[GO:0030425 "dendrite" evidence=ISO] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030675 "Rac GTPase activator activity"
evidence=ISO] [GO:0030676 "Rac guanyl-nucleotide exchange factor
activity" evidence=ISO] [GO:0031982 "vesicle" evidence=ISO]
[GO:0032313 "regulation of Rab GTPase activity" evidence=IDA]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=ISO] [GO:0035023 "regulation of Rho protein signal
transduction" evidence=IEA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IMP] [GO:0042802 "identical protein
binding" evidence=ISO] [GO:0042803 "protein homodimerization
activity" evidence=ISO] [GO:0043005 "neuron projection"
evidence=ISO] [GO:0043025 "neuronal cell body" evidence=ISO]
[GO:0043197 "dendritic spine" evidence=IDA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0043539 "protein
serine/threonine kinase activator activity" evidence=ISO]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=ISO] [GO:0048365 "Rac GTPase binding" evidence=ISO]
[GO:0048812 "neuron projection morphogenesis" evidence=ISO]
[GO:0051260 "protein homooligomerization" evidence=ISO] [GO:0071902
"positive regulation of protein serine/threonine kinase activity"
evidence=ISO] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS00741 PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233
MGI:MGI:1921268 INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204
GO:GO:0005829 GO:GO:0043234 GO:GO:0042803 GO:GO:0014069
GO:GO:0008104 GO:GO:0006979 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812 GO:GO:0007626
GO:GO:0035249 GO:GO:0043539 GO:GO:0030027 GO:GO:0016197
GO:GO:0030426 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:CH466548 GO:GO:0001726
eggNOG:COG4642 InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493
SMART:SM00698 PROSITE:PS51205 GeneTree:ENSGT00600000084242
CTD:57679 HOVERGEN:HBG037320 KO:K04575 OMA:AKPAIDF
OrthoDB:EOG4FTVZP ChiTaRS:ALS2 GO:GO:0005769 GO:GO:0031982
GO:GO:0017137 GO:GO:0017112 GO:GO:0030676 GO:GO:0001662
GO:GO:0032855 GO:GO:0001881 GO:GO:0051036 GO:GO:0032313
GO:GO:0016050 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 EMBL:AB053307 EMBL:AC153652 EMBL:BC031479
EMBL:BC046828 EMBL:AK014320 IPI:IPI00170364 IPI:IPI00309844
RefSeq:NP_001153420.2 RefSeq:NP_082993.4 RefSeq:NP_666221.1
UniGene:Mm.272078 STRING:Q920R0 PhosphoSite:Q920R0 PaxDb:Q920R0
PRIDE:Q920R0 Ensembl:ENSMUST00000027178 Ensembl:ENSMUST00000163058
GeneID:74018 KEGG:mmu:74018 UCSC:uc007bdm.2 UCSC:uc007bdn.2
HOGENOM:HOG000033908 InParanoid:Q920R0 NextBio:339546
Genevestigator:Q920R0 GermOnline:ENSMUSG00000026024 Uniprot:Q920R0
Length = 1651
Score = 137 (53.3 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 53/193 (27%), Positives = 87/193 (45%)
Query: 284 GKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPS---YASSLMD 340
G G++ V + A G RH ++T+ G + +FG S + ++ PS S+L+
Sbjct: 37 GWGGKT-VLQAALGVRHGVLLTEDGEVYSFG-----TLPWKSESAEICPSSPLLESALVG 90
Query: 341 IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQ--AENVPKLL---ETPILESK 395
V +A G +H+ ++ G VY++G N GQ Q E P + ET +
Sbjct: 91 HHVITVATGSFHSGAVTESGVVYMWGENAAGQCAVANQQYVPEPSPVSISDSETSPSLAV 150
Query: 396 RAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-----IHGFLPRN 450
R ++CG H+ L+ ++ W W QLGL I P P + G +
Sbjct: 151 RILQLACGEEHTLALSLSREI--WAWGTGCQLGL---ITTTFPVTKPQKVEHLAGRVVLQ 205
Query: 451 IACGWWHTLLLAE 463
+ACG +H+L L +
Sbjct: 206 VACGAFHSLALVQ 218
Score = 122 (48.0 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 49/164 (29%), Positives = 73/164 (44%)
Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALL--------TF 313
LE + P L+ Q S KA R + + +S +A ALL T+
Sbjct: 469 LEGGSRRLSLPGLLSQVSPRLLRKAARVKTRTVVLTPTYSG---EADALLPSLRTEVWTW 525
Query: 314 GWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQL 373
G G GQ GHG +L+P L +V + AG H++ ++ + +VY +G N FGQL
Sbjct: 526 GKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGSHSLALTAKSQVYSWGSNTFGQL 585
Query: 374 GTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL--TEDGQ 415
G + VP+L + + V+ G +S L TED Q
Sbjct: 586 GHS-EFPTTVPRL--SKVSSENGVWSVAAGQDYSLFLVDTEDFQ 626
Score = 113 (44.8 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 36/113 (31%), Positives = 55/113 (48%)
Query: 357 SVEGRVYVFGGNQFGQLGTGVDQAENVPKL--LETPILESKRAKVVSCGARHSAVLTEDG 414
S+ V+ +G + GQLG G + +P+L L L+ K + G HS LT
Sbjct: 517 SLRTEVWTWGKGKEGQLGHG----DVLPRLQPLCVKCLDGKEVIHLEAGGSHSLALTAKS 572
Query: 415 QVLSWGWNKYGQLGLGDSIDRNIPSLVPI---HGFLPRNIACGWWHTLLLAET 464
QV SWG N +GQLG + +P L + +G ++A G ++L L +T
Sbjct: 573 QVYSWGSNTFGQLGHSE-FPTTVPRLSKVSSENGVW--SVAAGQDYSLFLVDT 622
Score = 87 (35.7 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 45/150 (30%), Positives = 65/150 (43%)
Query: 88 SGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG---WR----ECVPSAKVT 140
+G TPE P +V++AA G H V +TE GEVY++G W+ E PS+ +
Sbjct: 25 AGSFSLTPERLPGWGGKTVLQAALGVRHGVLLTEDGEVYSFGTLPWKSESAEICPSSPLL 84
Query: 141 RDFGSAGSFQKDSTGK-QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE-NPASGDEF 198
+TG S TE GE + ++ + E +P S +
Sbjct: 85 ESALVGHHVITVATGSFHSGAVTESGVVY--MWGENAAGQCAVANQQYVPEPSPVSISDS 142
Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
T SP L V+I ++A G HTL LS
Sbjct: 143 ET-SPSLA-----VRILQLACGEEHTLALS 166
Score = 77 (32.2 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 33/119 (27%), Positives = 55/119 (46%)
Query: 22 VYMWGYLPGTSPEKSPIL--SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSAD 79
VY +G LP S E + I SP+ G V G A +ESG + WG +
Sbjct: 62 VYSFGTLPWKS-ESAEICPSSPLLESALVGHHVITVATGSFHSG-AVTESGVVYMWGE-N 118
Query: 80 DEGQSYLTSGKHGETPEPFPLP---TEAS------VVKAAAGWAHCVSVTEAGEVYTWG 129
GQ + + ++ PEP P+ +E S +++ A G H ++++ + E++ WG
Sbjct: 119 AAGQCAVANQQY--VPEPSPVSISDSETSPSLAVRILQLACGEEHTLALSLSREIWAWG 175
Score = 44 (20.5 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 328 DQLRPSYASSLMDIQVEQIAAG 349
+ L+ +SSLMDI+ E++ G
Sbjct: 451 ESLQGKKSSSLMDIREEELEGG 472
>ASPGD|ASPL0000042168 [details] [associations]
symbol:AN2073 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408 EMBL:BN001307
Gene3D:1.25.40.20 InterPro:IPR020683 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 EMBL:AACD01000032 PRINTS:PR00633 PROSITE:PS50012
eggNOG:COG5184 OrthoDB:EOG42VCR5 RefSeq:XP_659677.1
ProteinModelPortal:Q5BBK7 EnsemblFungi:CADANIAT00008743
GeneID:2875213 KEGG:ani:AN2073.2 HOGENOM:HOG000182979 OMA:DRLSQIC
Uniprot:Q5BBK7
Length = 1680
Score = 157 (60.3 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 53/164 (32%), Positives = 84/164 (51%)
Query: 285 KAGRSYVKEIACGGRHSAVVTD--AGALLTFGWGLYGQCGHG--STNDQLRPSYASSLMD 340
KA ++ +A H+A++TD L G+G G+ G G ST L +
Sbjct: 419 KARPLKIQTLAMSKLHTAILTDDPESNLFICGFGPGGRLGTGDESTRFSFVCIEGGGLAN 478
Query: 341 IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAEN---VP-KLLETPILESKR 396
+V +A G HT+ I+ G ++ +G N+FGQLG G+ +A N VP +L I +
Sbjct: 479 KKVASVALGQDHTLAITEHGDIFSWGSNKFGQLGYGLPRANNKDDVPVQLSPRQIFNPFK 538
Query: 397 AKVV---SCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNI 437
+V+ + A HS V + G + ++G N+ GQLGL DS R++
Sbjct: 539 KEVILGAAASAVHSVVYSTSG-LYTFGKNE-GQLGLVDSDARSL 580
Score = 143 (55.4 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 39/128 (30%), Positives = 65/128 (50%)
Query: 327 NDQLRPSYASSLMDIQVEQIAAGLWHTVCIS--VEGRVYVFGGNQFGQLGTGVDQAENVP 384
+DQ P++ + ++++ +A HT ++ E +++ G G+LGTG +
Sbjct: 410 SDQDLPAFIKA-RPLKIQTLAMSKLHTAILTDDPESNLFICGFGPGGRLGTGDESTRFSF 468
Query: 385 KLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDR-NIPSLVPI 443
+E L +K+ V+ G H+ +TE G + SWG NK+GQLG G + R N VP+
Sbjct: 469 VCIEGGGLANKKVASVALGQDHTLAITEHGDIFSWGSNKFGQLGYG--LPRANNKDDVPV 526
Query: 444 HGFLPRNI 451
PR I
Sbjct: 527 Q-LSPRQI 533
>UNIPROTKB|F1MDF3 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051036 "regulation of endosome size" evidence=IEA]
[GO:0048812 "neuron projection morphogenesis" evidence=IEA]
[GO:0043539 "protein serine/threonine kinase activator activity"
evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=IEA] [GO:0032313 "regulation of Rab GTPase activity"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0030676 "Rac
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0030027 "lamellipodium" evidence=IEA] [GO:0017137 "Rab GTPase
binding" evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0016197 "endosomal transport"
evidence=IEA] [GO:0016050 "vesicle organization" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0008104
"protein localization" evidence=IEA] [GO:0007626 "locomotory
behavior" evidence=IEA] [GO:0007528 "neuromuscular junction
development" evidence=IEA] [GO:0006979 "response to oxidative
stress" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005769 "early endosome"
evidence=IEA] [GO:0001881 "receptor recycling" evidence=IEA]
[GO:0001726 "ruffle" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0005543 "phospholipid binding"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
Pfam:PF02204 GO:GO:0005829 GO:GO:0005813 GO:GO:0043234
GO:GO:0014069 GO:GO:0008104 GO:GO:0006979 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0016197
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
GeneTree:ENSGT00600000084242 OMA:AKPAIDF GO:GO:0005769
GO:GO:0017112 GO:GO:0030676 GO:GO:0001662 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:DAAA02005594
EMBL:DAAA02005595 EMBL:DAAA02005596 IPI:IPI00905690
Ensembl:ENSBTAT00000060956 Uniprot:F1MDF3
Length = 1661
Score = 131 (51.2 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 52/172 (30%), Positives = 77/172 (44%)
Query: 258 LIPCLEHAASGKDR----PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALL-- 311
L+ E + G R P L+ Q S KA R + + +S +A ALL
Sbjct: 471 LVDIREEESEGGSRRLSLPGLLSQVSPRLLRKAARVKTRTVVLTPTYSG---EADALLPS 527
Query: 312 ------TFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVF 365
T+G G GQ GHG +L+P L +V + AG +H++ ++ + +VY +
Sbjct: 528 LRTEVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSW 587
Query: 366 GGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVL--TEDGQ 415
G N FGQLG D VP+L + + V+ G +S L TED Q
Sbjct: 588 GSNTFGQLGHS-DFPTTVPRLAK--VNSENGVWSVAAGQDYSLFLVDTEDFQ 636
Score = 131 (51.2 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 77/327 (23%), Positives = 125/327 (38%)
Query: 148 SFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVT 207
SF +D G + D +A E V++ S RE SEN G++ P +
Sbjct: 324 SFPQDIMGTTEVSSASRPSYPDTQAVNEYVQKLSDHSVRESSEN---GEKPVPSQPLVEE 380
Query: 208 LNPGVKITKVAA-GGRHTLILSDMXXXXXXXXXXXXXXXXXSRIKMVPTPHLIPCLEHAA 266
P + + ++L++S S K++ + PC A
Sbjct: 381 AIPNLHSPPTTSTSALNSLVVS-CASAVGVRVAATYEAGALSLKKVMNFYNTAPCEPGAL 439
Query: 267 SGKDRPLLVRQGSVNSSG-KAGRS-YVKEIACGGRHSAVVTDAGALLTFGWG----LYGQ 320
+G S+ G K R VK+ + G+ S+ + D + G L G
Sbjct: 440 AGSS--------SIGPEGLKDSREEQVKQESMQGKKSSSLVDIREEESEGGSRRLSLPGL 491
Query: 321 CGHGSTNDQLRPSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQA 380
S LR + + + +G + S+ V+ +G + GQLG G
Sbjct: 492 LSQVSPR-LLRKAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKEGQLGHG---- 546
Query: 381 ENVPKL--LETPILESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIP 438
+ +P+L L L+ K + G HS LT QV SWG N +GQLG D +P
Sbjct: 547 DVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSNTFGQLGHSD-FPTTVP 605
Query: 439 SLVPIHGFLPR-NIACGWWHTLLLAET 464
L ++ ++A G ++L L +T
Sbjct: 606 RLAKVNSENGVWSVAAGQDYSLFLVDT 632
Score = 125 (49.1 bits), Expect = 0.00050, P = 0.00050
Identities = 52/195 (26%), Positives = 83/195 (42%)
Query: 284 GKAGRSYVKEIACGGRHSAVVTDA-----GALLTFGWGLYGQCGHGSTNDQLRPSYASSL 338
G G++ V A G +H ++T+ G + +FG L + T P S+L
Sbjct: 37 GWGGKT-VLHAALGVKHGVLLTEVFKPSDGEVYSFGT-LPWRSEPAETCPS-NPILESAL 93
Query: 339 MDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLL-----ETPILE 393
+ V +A G +HT ++ G VY++G N GQ P + ET L
Sbjct: 94 VGQYVVTVATGSFHTGAVTDSGVVYMWGENSAGQCAVANQPYVPEPNPVSISDSETSPLL 153
Query: 394 SKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVP-----IHGFLP 448
+ R ++CG H+ L+ ++ W W QLGL I P P + G +
Sbjct: 154 AVRILQLACGEEHTLALSLSREI--WAWGTGCQLGL---ITTTFPVTKPQKVEHLAGRVV 208
Query: 449 RNIACGWWHTLLLAE 463
+ACG +H+L L +
Sbjct: 209 LQVACGAFHSLALVQ 223
Score = 76 (31.8 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 29/116 (25%), Positives = 52/116 (44%)
Query: 22 VYMWGYLPGTS-PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADD 80
VY +G LP S P ++ +PI G V G A ++SG + WG +
Sbjct: 67 VYSFGTLPWRSEPAETCPSNPILESALVGQYVVTVATGSFHTG-AVTDSGVVYMWGE-NS 124
Query: 81 EGQSYLTSGKHGETPEPFPLP-TEAS------VVKAAAGWAHCVSVTEAGEVYTWG 129
GQ + + + P P + +E S +++ A G H ++++ + E++ WG
Sbjct: 125 AGQCAVANQPYVPEPNPVSISDSETSPLLAVRILQLACGEEHTLALSLSREIWAWG 180
Score = 70 (29.7 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 46/158 (29%), Positives = 64/158 (40%)
Query: 88 SGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA-----GEVYTWG---WR----ECVP 135
+G TPE P +V+ AA G H V +TE GEVY++G WR E P
Sbjct: 25 AGSCSVTPERLPGWGGKTVLHAALGVKHGVLLTEVFKPSDGEVYSFGTLPWRSEPAETCP 84
Query: 136 SAKVTRDFGSAGSFQKD-STGK-QSALPTEQAPP---SDKRAGEEVVKRRKTSSAREESE 190
S + G + +TG + T+ + AG+ V +
Sbjct: 85 SNPILES-ALVGQYVVTVATGSFHTGAVTDSGVVYMWGENSAGQCAV----ANQPYVPEP 139
Query: 191 NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
NP S + T SP L V+I ++A G HTL LS
Sbjct: 140 NPVSISDSET-SPLLA-----VRILQLACGEEHTLALS 171
Score = 46 (21.3 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 31/109 (28%), Positives = 40/109 (36%)
Query: 121 EAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRR 180
E G V+ W C + + +G K L TE PSD GE V
Sbjct: 16 ERGLVHVWQAGSCSVTPERLPGWGGKTVLHAALGVKHGVLLTEVFKPSD---GE--VYSF 70
Query: 181 KTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
T R E PA E +P L + G + VA G HT ++D
Sbjct: 71 GTLPWRSE---PA---ETCPSNPILESALVGQYVVTVATGSFHTGAVTD 113
>DICTYBASE|DDB_G0280093 [details] [associations]
symbol:gacGG "RhoGAP domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0007165 "signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0043547 "positive regulation of GTPase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005096
"GTPase activator activity" evidence=IEA] InterPro:IPR000198
InterPro:IPR008936 Pfam:PF00620 PROSITE:PS50238 SMART:SM00324
dictyBase:DDB_G0280093 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0007165 GO:GO:0005096 GO:GO:0043547
Gene3D:1.10.555.10 SUPFAM:SSF48350 GenomeReviews:CM000152_GR
EMBL:AAFI02000035 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 HSSP:Q07960 RefSeq:XP_641238.1
ProteinModelPortal:Q54VW7 EnsemblProtists:DDB0233849 GeneID:8622369
KEGG:ddi:DDB_G0280093 InParanoid:Q54VW7 OMA:INSIVEC Uniprot:Q54VW7
Length = 1203
Score = 155 (59.6 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 51/162 (31%), Positives = 76/162 (46%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYG-QCGHGSTNDQLRPSYASSLMDIQVEQIAAG 349
VK I+CGG SA + + G L +G + G +C T L + + I + A
Sbjct: 89 VKSISCGGNFSAAIMENGLLYVWGTLIEGGKCTESPTKVDLLKGV--TCVSIGINHCAV- 145
Query: 350 LWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAV 409
+ + + VY +G N+ GQLG D N P+ + L SK A V CG +A
Sbjct: 146 VADSPTTPEKRSVYTWGTNRKGQLGVVGDSITNAPRRVT---LGSK-AISVCCGEEFTAA 201
Query: 410 LTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNI 451
+ E +V WG+NK Q+ +S D I +P+ FL R+I
Sbjct: 202 IVEGNEVFVWGYNKSRQICSNNS-DEIIS--IPVKPFLGRDI 240
>WB|WBGene00017190 [details] [associations]
symbol:F07B7.12 species:6239 "Caenorhabditis elegans"
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR027047
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR012983 Pfam:PF08005 EMBL:FO081059
GeneTree:ENSGT00390000011403 KO:K10693 PANTHER:PTHR12846
eggNOG:NOG240798 RefSeq:NP_505281.1 ProteinModelPortal:Q965Y9
SMR:Q965Y9 STRING:Q965Y9 PaxDb:Q965Y9 EnsemblMetazoa:F07B7.12
GeneID:184118 KEGG:cel:CELE_F07B7.12 UCSC:F07B7.12 CTD:184118
WormBase:F07B7.12 InParanoid:Q965Y9 OMA:KESRITH NextBio:923582
Uniprot:Q965Y9
Length = 1900
Score = 150 (57.9 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 43/121 (35%), Positives = 63/121 (52%)
Query: 340 DIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKV 399
D++V ++ G +HTV ++ + RV+ FG N GQLG G ++N P+ + IL S V
Sbjct: 766 DVKVSSVSCGNFHTVLLASDRRVFTFGSNCHGQLGVGDTLSKNTPQQV---ILPSDTVIV 822
Query: 400 -VSCGARHSAVLTEDGQVLSWGWNKYGQLG--LGDSIDRN-IPSLVPIHGFLPR-NIACG 454
V+ G+ H+ + DG V ++G GQL G+ N IP V GF P N G
Sbjct: 823 QVAAGSNHTILRANDGSVFTFGAFGKGQLARPAGEKAGWNAIPEKVS--GFGPGFNAFAG 880
Query: 455 W 455
W
Sbjct: 881 W 881
Score = 121 (47.7 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 27/83 (32%), Positives = 41/83 (49%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
V ++CG H+ ++ + TFG +GQ G G T + P D + Q+AAG
Sbjct: 769 VSSVSCGNFHTVLLASDRRVFTFGSNCHGQLGVGDTLSKNTPQQVILPSDTVIVQVAAGS 828
Query: 351 WHTVCISVEGRVYVFGGNQFGQL 373
HT+ + +G V+ FG GQL
Sbjct: 829 NHTILRANDGSVFTFGAFGKGQL 851
Score = 114 (45.2 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 25/65 (38%), Positives = 41/65 (63%)
Query: 400 VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS--LVPIHGFLPRNIACGWWH 457
VSCG H+ +L D +V ++G N +GQLG+GD++ +N P ++P + + +A G H
Sbjct: 772 VSCGNFHTVLLASDRRVFTFGSNCHGQLGVGDTLSKNTPQQVILPSDTVIVQ-VAAGSNH 830
Query: 458 TLLLA 462
T+L A
Sbjct: 831 TILRA 835
Score = 71 (30.1 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 22/69 (31%), Positives = 29/69 (42%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGH-GSTNDQLRPSYASSLMDIQVEQIAAG 349
+ +A G H VT G L T+G QCG ST+ P + S + Q+ I
Sbjct: 615 ISSLALGKSHGVAVTRNGHLFTWGLNNMNQCGRVESTSTTSSPRH-SGRQEYQICPIGEH 673
Query: 350 LWHTVCISV 358
W T SV
Sbjct: 674 TWLTDTPSV 682
Score = 56 (24.8 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 110 AAGWAHCVSVTEAGEVYTWG 129
A G +H V+VT G ++TWG
Sbjct: 619 ALGKSHGVAVTRNGHLFTWG 638
Score = 40 (19.1 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 59 GCGFALATSESGKLITWG 76
G +A + +G L TWG
Sbjct: 621 GKSHGVAVTRNGHLFTWG 638
>GENEDB_PFALCIPARUM|PFE0420c [details] [associations]
symbol:PFE0420c "guanidine nucleotide exchange
factor, putative" species:5833 "Plasmodium falciparum" [GO:0006323
"DNA packaging" evidence=ISS] [GO:0020011 "apicoplast"
evidence=RCA] INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0006323 EMBL:AL844504
GenomeReviews:AL844504_GR RefSeq:XP_001351643.1
ProteinModelPortal:Q8I418 EnsemblProtists:PFE0420c:mRNA
GeneID:812857 KEGG:pfa:PFE0420c EuPathDB:PlasmoDB:PF3D7_0508500
HOGENOM:HOG000284105 ProtClustDB:CLSZ2446497 Uniprot:Q8I418
Length = 2606
Score = 153 (58.9 bits), Expect = 5.3e-07, Sum P(3) = 5.3e-07
Identities = 38/134 (28%), Positives = 65/134 (48%)
Query: 288 RSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA 347
++ V + G +HS G + ++G+G G+ G G+ +P L + ++ +
Sbjct: 438 KNVVIHCSAGSKHSLACNLHGDIYSWGYGGNGRLGLGNIKSYNKPQLIKGLRNKRILYVC 497
Query: 348 AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGARH 406
AG H+ CI VY +G +F +LG G D + PKL+E + +K+ ++S G +
Sbjct: 498 AGTSHSGCIDSNYNVYTWGNGKFYKLGHGNDDIDIYYPKLVEC-LNHNKKVCMLSFGCFN 556
Query: 407 SAVLTEDGQVLSWG 420
S L G V WG
Sbjct: 557 SLALNVKGDVYVWG 570
Score = 131 (51.2 bits), Expect = 4.9e-06, Sum P(3) = 4.9e-06
Identities = 33/96 (34%), Positives = 52/96 (54%)
Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
+AG H++ ++ G +Y +G G+LG G ++ N P+L++ L +KR V G H
Sbjct: 445 SAGSKHSLACNLHGDIYSWGYGGNGRLGLGNIKSYNKPQLIKG--LRNKRILYVCAGTSH 502
Query: 407 SAVLTEDGQVLSWGWNKYGQLGLG-DSIDRNIPSLV 441
S + + V +WG K+ +LG G D ID P LV
Sbjct: 503 SGCIDSNYNVYTWGNGKFYKLGHGNDDIDIYYPKLV 538
Score = 89 (36.4 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 31/94 (32%), Positives = 43/94 (45%)
Query: 360 GRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSW 419
G +Y++G + G++G GVD + LL I + S G HS LT ++
Sbjct: 905 GDLYIWGNAESGKVGLGVDYTQGCI-LLPRKINIINKIYKCSLGNSHSLFLTNTNELYVC 963
Query: 420 GWNKYGQLGLGDSIDR--NIPSLVPIHGFLPRNI 451
G N G+LGL + NI S VP L NI
Sbjct: 964 GSNNNGRLGLFEKSKMVCNIVS-VPTKVILHNNI 996
Score = 83 (34.3 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 24/66 (36%), Positives = 32/66 (48%)
Query: 293 EIACGGRHSAVVTDAGALLTFGWGLY--GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
+IACG + V+D G L +GWG Q G G D P + +L + V I AG
Sbjct: 810 KIACGYNYVLCVSDVG--LVYGWGKNDKSQLGIGVIKDFYEPVHVKNLTN--VINIFAGY 865
Query: 351 WHTVCI 356
H+ CI
Sbjct: 866 DHSACI 871
Score = 73 (30.8 bits), Expect = 4.9e-06, Sum P(3) = 4.9e-06
Identities = 12/43 (27%), Positives = 24/43 (55%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPS 333
+K I+CG H+ + G L ++G+ +G G+G+ + P+
Sbjct: 351 IKFISCGDMHTLAICTGGVLYSWGYNNFGCIGNGTNQNVYEPT 393
Score = 69 (29.3 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 19/74 (25%), Positives = 31/74 (41%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAH 115
C G +LA + G + +WG + G+ L + K P+ ++ AG +H
Sbjct: 444 CSAGSKHSLACNLHGDIYSWGYGGN-GRLGLGNIKSYNKPQLIKGLRNKRILYVCAGTSH 502
Query: 116 CVSVTEAGEVYTWG 129
+ VYTWG
Sbjct: 503 SGCIDSNYNVYTWG 516
Score = 54 (24.1 bits), Expect = 5.3e-07, Sum P(3) = 5.3e-07
Identities = 12/45 (26%), Positives = 24/45 (53%)
Query: 97 PFPL----PTEASVVK-AAAGWAHCVSVTEAGEVYTWGWRE--CV 134
PFP+ P + + +K + G H +++ G +Y+WG+ C+
Sbjct: 337 PFPMKIVFPKKNTKIKFISCGDMHTLAICTGGVLYSWGYNNFGCI 381
Score = 44 (20.5 bits), Expect = 5.3e-07, Sum P(3) = 5.3e-07
Identities = 15/58 (25%), Positives = 25/58 (43%)
Query: 412 EDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIAC--GWWHTLLLAETTQI 467
E G + WG + G++GLG + L + + C G H+L L T ++
Sbjct: 903 ECGDLYIWGNAESGKVGLGVDYTQGCILLPRKINIINKIYKCSLGNSHSLFLTNTNEL 960
Score = 41 (19.5 bits), Expect = 1.8e-05, Sum P(4) = 1.8e-05
Identities = 15/61 (24%), Positives = 26/61 (42%)
Query: 169 DKRAGEEV-VKRRKTSSAREESENPASGDEFFTLSPCLVTL-NPGVKITKVAAGGRHTLI 226
D++ E++ + + K EN D +FT P + KI ++ G HTL
Sbjct: 305 DEKKKEKMNIYKNKEKLYSNIKENDNKHD-WFTPFPMKIVFPKKNTKIKFISCGDMHTLA 363
Query: 227 L 227
+
Sbjct: 364 I 364
Score = 39 (18.8 bits), Expect = 4.9e-06, Sum P(3) = 4.9e-06
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 108 KAAAGWAH--CVSVTE-AGEVYTWGWREC 133
K + G H CV+ + ++TWG C
Sbjct: 21 KISTGLDHYACVAYYKNKPSIFTWGGNSC 49
>UNIPROTKB|Q8I418 [details] [associations]
symbol:RCC1 "Guanidine nucleotide exchange factor"
species:36329 "Plasmodium falciparum 3D7" [GO:0006323 "DNA
packaging" evidence=ISS] [GO:0020011 "apicoplast" evidence=RCA]
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0006323 EMBL:AL844504
GenomeReviews:AL844504_GR RefSeq:XP_001351643.1
ProteinModelPortal:Q8I418 EnsemblProtists:PFE0420c:mRNA
GeneID:812857 KEGG:pfa:PFE0420c EuPathDB:PlasmoDB:PF3D7_0508500
HOGENOM:HOG000284105 ProtClustDB:CLSZ2446497 Uniprot:Q8I418
Length = 2606
Score = 153 (58.9 bits), Expect = 5.3e-07, Sum P(3) = 5.3e-07
Identities = 38/134 (28%), Positives = 65/134 (48%)
Query: 288 RSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPSYASSLMDIQVEQIA 347
++ V + G +HS G + ++G+G G+ G G+ +P L + ++ +
Sbjct: 438 KNVVIHCSAGSKHSLACNLHGDIYSWGYGGNGRLGLGNIKSYNKPQLIKGLRNKRILYVC 497
Query: 348 AGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAE-NVPKLLETPILESKRAKVVSCGARH 406
AG H+ CI VY +G +F +LG G D + PKL+E + +K+ ++S G +
Sbjct: 498 AGTSHSGCIDSNYNVYTWGNGKFYKLGHGNDDIDIYYPKLVEC-LNHNKKVCMLSFGCFN 556
Query: 407 SAVLTEDGQVLSWG 420
S L G V WG
Sbjct: 557 SLALNVKGDVYVWG 570
Score = 131 (51.2 bits), Expect = 4.9e-06, Sum P(3) = 4.9e-06
Identities = 33/96 (34%), Positives = 52/96 (54%)
Query: 347 AAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARH 406
+AG H++ ++ G +Y +G G+LG G ++ N P+L++ L +KR V G H
Sbjct: 445 SAGSKHSLACNLHGDIYSWGYGGNGRLGLGNIKSYNKPQLIKG--LRNKRILYVCAGTSH 502
Query: 407 SAVLTEDGQVLSWGWNKYGQLGLG-DSIDRNIPSLV 441
S + + V +WG K+ +LG G D ID P LV
Sbjct: 503 SGCIDSNYNVYTWGNGKFYKLGHGNDDIDIYYPKLV 538
Score = 89 (36.4 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 31/94 (32%), Positives = 43/94 (45%)
Query: 360 GRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSW 419
G +Y++G + G++G GVD + LL I + S G HS LT ++
Sbjct: 905 GDLYIWGNAESGKVGLGVDYTQGCI-LLPRKINIINKIYKCSLGNSHSLFLTNTNELYVC 963
Query: 420 GWNKYGQLGLGDSIDR--NIPSLVPIHGFLPRNI 451
G N G+LGL + NI S VP L NI
Sbjct: 964 GSNNNGRLGLFEKSKMVCNIVS-VPTKVILHNNI 996
Score = 83 (34.3 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 24/66 (36%), Positives = 32/66 (48%)
Query: 293 EIACGGRHSAVVTDAGALLTFGWGLY--GQCGHGSTNDQLRPSYASSLMDIQVEQIAAGL 350
+IACG + V+D G L +GWG Q G G D P + +L + V I AG
Sbjct: 810 KIACGYNYVLCVSDVG--LVYGWGKNDKSQLGIGVIKDFYEPVHVKNLTN--VINIFAGY 865
Query: 351 WHTVCI 356
H+ CI
Sbjct: 866 DHSACI 871
Score = 73 (30.8 bits), Expect = 4.9e-06, Sum P(3) = 4.9e-06
Identities = 12/43 (27%), Positives = 24/43 (55%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRPS 333
+K I+CG H+ + G L ++G+ +G G+G+ + P+
Sbjct: 351 IKFISCGDMHTLAICTGGVLYSWGYNNFGCIGNGTNQNVYEPT 393
Score = 69 (29.3 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 19/74 (25%), Positives = 31/74 (41%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAH 115
C G +LA + G + +WG + G+ L + K P+ ++ AG +H
Sbjct: 444 CSAGSKHSLACNLHGDIYSWGYGGN-GRLGLGNIKSYNKPQLIKGLRNKRILYVCAGTSH 502
Query: 116 CVSVTEAGEVYTWG 129
+ VYTWG
Sbjct: 503 SGCIDSNYNVYTWG 516
Score = 54 (24.1 bits), Expect = 5.3e-07, Sum P(3) = 5.3e-07
Identities = 12/45 (26%), Positives = 24/45 (53%)
Query: 97 PFPL----PTEASVVK-AAAGWAHCVSVTEAGEVYTWGWRE--CV 134
PFP+ P + + +K + G H +++ G +Y+WG+ C+
Sbjct: 337 PFPMKIVFPKKNTKIKFISCGDMHTLAICTGGVLYSWGYNNFGCI 381
Score = 44 (20.5 bits), Expect = 5.3e-07, Sum P(3) = 5.3e-07
Identities = 15/58 (25%), Positives = 25/58 (43%)
Query: 412 EDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIAC--GWWHTLLLAETTQI 467
E G + WG + G++GLG + L + + C G H+L L T ++
Sbjct: 903 ECGDLYIWGNAESGKVGLGVDYTQGCILLPRKINIINKIYKCSLGNSHSLFLTNTNEL 960
Score = 41 (19.5 bits), Expect = 1.8e-05, Sum P(4) = 1.8e-05
Identities = 15/61 (24%), Positives = 26/61 (42%)
Query: 169 DKRAGEEV-VKRRKTSSAREESENPASGDEFFTLSPCLVTL-NPGVKITKVAAGGRHTLI 226
D++ E++ + + K EN D +FT P + KI ++ G HTL
Sbjct: 305 DEKKKEKMNIYKNKEKLYSNIKENDNKHD-WFTPFPMKIVFPKKNTKIKFISCGDMHTLA 363
Query: 227 L 227
+
Sbjct: 364 I 364
Score = 39 (18.8 bits), Expect = 4.9e-06, Sum P(3) = 4.9e-06
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 108 KAAAGWAH--CVSVTE-AGEVYTWGWREC 133
K + G H CV+ + ++TWG C
Sbjct: 21 KISTGLDHYACVAYYKNKPSIFTWGGNSC 49
>WB|WBGene00004457 [details] [associations]
symbol:rpm-1 species:6239 "Caenorhabditis elegans"
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0050807 "regulation of synapse organization" evidence=IGI;IMP]
[GO:0040011 "locomotion" evidence=IGI] [GO:0043409 "negative
regulation of MAPK cascade" evidence=IGI] [GO:0031647 "regulation
of protein stability" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0018991 "oviposition"
evidence=IMP] [GO:0030424 "axon" evidence=IDA] [GO:0031594
"neuromuscular junction" evidence=IDA] [GO:0045202 "synapse"
evidence=IDA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0031435 "mitogen-activated protein kinase kinase
kinase binding" evidence=IPI] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR027047 Pfam:PF00643 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
INTERPRO:IPR000408 Pfam:PF00415 Prosite:PS00518 GO:GO:0005634
GO:GO:0018991 GO:GO:0006915 GO:GO:0006355 GO:GO:0046872
GO:GO:0030424 GO:GO:0008270 GO:GO:0031594 GO:GO:0010171
GO:GO:0040011 GO:GO:0006351 GO:GO:0031647 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939
PROSITE:PS51284 GO:GO:0043409 InterPro:IPR012983 Pfam:PF08005
GO:GO:0050807 GeneTree:ENSGT00390000011403 KO:K10693
PANTHER:PTHR12846 eggNOG:NOG240798 EMBL:FO080217 PIR:T29165
RefSeq:NP_505267.1 ProteinModelPortal:Q17551 SMR:Q17551
STRING:Q17551 PaxDb:Q17551 EnsemblMetazoa:C01B7.6 GeneID:179259
KEGG:cel:CELE_C01B7.6 UCSC:C01B7.6 CTD:179259 WormBase:C01B7.6
HOGENOM:HOG000016145 InParanoid:Q17551 OMA:LLSILHW NextBio:904596
Uniprot:Q17551
Length = 3766
Score = 150 (57.9 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 43/121 (35%), Positives = 63/121 (52%)
Query: 340 DIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKV 399
D++V ++ G +HTV ++ + RV+ FG N GQLG G ++N P+ + IL S V
Sbjct: 766 DVKVSSVSCGNFHTVLLASDRRVFTFGSNCHGQLGVGDTLSKNTPQQV---ILPSDTVIV 822
Query: 400 -VSCGARHSAVLTEDGQVLSWGWNKYGQLG--LGDSIDRN-IPSLVPIHGFLPR-NIACG 454
V+ G+ H+ + DG V ++G GQL G+ N IP V GF P N G
Sbjct: 823 QVAAGSNHTILRANDGSVFTFGAFGKGQLARPAGEKAGWNAIPEKVS--GFGPGFNAFAG 880
Query: 455 W 455
W
Sbjct: 881 W 881
Score = 114 (45.2 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 25/65 (38%), Positives = 41/65 (63%)
Query: 400 VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPS--LVPIHGFLPRNIACGWWH 457
VSCG H+ +L D +V ++G N +GQLG+GD++ +N P ++P + + +A G H
Sbjct: 772 VSCGNFHTVLLASDRRVFTFGSNCHGQLGVGDTLSKNTPQQVILPSDTVIVQ-VAAGSNH 830
Query: 458 TLLLA 462
T+L A
Sbjct: 831 TILRA 835
Score = 71 (30.1 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 22/69 (31%), Positives = 29/69 (42%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCGH-GSTNDQLRPSYASSLMDIQVEQIAAG 349
+ +A G H VT G L T+G QCG ST+ P + S + Q+ I
Sbjct: 615 ISSLALGKSHGVAVTRNGHLFTWGLNNMNQCGRVESTSTTSSPRH-SGRQEYQICPIGEH 673
Query: 350 LWHTVCISV 358
W T SV
Sbjct: 674 TWLTDTPSV 682
Score = 56 (24.8 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 110 AAGWAHCVSVTEAGEVYTWG 129
A G +H V+VT G ++TWG
Sbjct: 619 ALGKSHGVAVTRNGHLFTWG 638
Score = 40 (19.1 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 59 GCGFALATSESGKLITWG 76
G +A + +G L TWG
Sbjct: 621 GKSHGVAVTRNGHLFTWG 638
>SGD|S000000018 [details] [associations]
symbol:ATS1 "Protein required for modification of wobble
nucleosides in tRNA" species:4932 "Saccharomyces cerevisiae"
[GO:0007017 "microtubule-based process" evidence=IGI;ISS]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=IDA;IPI] [GO:0002098 "tRNA wobble uridine
modification" evidence=IMP] [GO:0000226 "microtubule cytoskeleton
organization" evidence=IGI;IMP] [GO:0007117 "budding cell bud
growth" evidence=IGI;IMP] SGD:S000000018 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0000226 EMBL:L05146 EMBL:BK006935
GO:GO:0007117 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
PIR:S36714 RefSeq:NP_009382.2 ProteinModelPortal:P31386 SMR:P31386
IntAct:P31386 MINT:MINT-2786397 STRING:P31386 PeptideAtlas:P31386
EnsemblFungi:YAL020C GeneID:851213 KEGG:sce:YAL020C CYGD:YAL020c
eggNOG:COG5184 HOGENOM:HOG000163478 KO:K15462 OMA:GAGCATS
OrthoDB:EOG4H75MP NextBio:968094 Genevestigator:P31386
GermOnline:YAL020C GO:GO:0002098 Uniprot:P31386
Length = 333
Score = 137 (53.3 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 32/101 (31%), Positives = 53/101 (52%)
Query: 362 VYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSWGW 421
VY FG N QLG G D+ + P+ P + + ++CG HS +LT DG ++ G
Sbjct: 4 VYAFGSNGQRQLGLGHDEDMDTPQR-SVPGDDGAIVRKIACGGNHSVMLTNDGNLVGCGD 62
Query: 422 NKYGQLGLGDSIDRNIPSLVPIHGFLPR-NIACGWWHTLLL 461
N+ G+L ++ R + P+ P ++ACGW T+++
Sbjct: 63 NRRGELDSAQAL-RQVHDWRPVEVPAPVVDVACGWDTTVIV 102
>ASPGD|ASPL0000040680 [details] [associations]
symbol:AN2874 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] INTERPRO:IPR000408 EMBL:BN001306 EMBL:AACD01000051
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
RefSeq:XP_660478.1 ProteinModelPortal:Q5B9A6
EnsemblFungi:CADANIAT00010215 GeneID:2873908 KEGG:ani:AN2874.2
Uniprot:Q5B9A6
Length = 1365
Score = 97 (39.2 bits), Expect = 2.9e-06, Sum P(3) = 2.9e-06
Identities = 25/96 (26%), Positives = 45/96 (46%)
Query: 376 GVDQAENVPKLLETPIL------ESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
G D+ +P +++ P K K+VS G H+ +T G+ L WG N + ++
Sbjct: 1269 GRDEGTQIPAIMKVPTFVPGINAHDKGIKMVSAGWTHTIAVTNGGKALGWGSNDHYEIHP 1328
Query: 430 GDSIDR-NIPSLVPIHGFLPRNIACGWWHTLLLAET 464
++ N P +P+ G A G + T+LL ++
Sbjct: 1329 DETKHPINDPMEIPMEGLRVVEAAAGRFFTILLVQS 1364
Score = 87 (35.7 bits), Expect = 2.9e-06, Sum P(3) = 2.9e-06
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 80 DEGQSYLTSGKHGETPEPFPLPTEAS----VVKAAAGWAHCVSVTEAGEVYTWG 129
+ G L G +G TP + PT+ + VV+ AAG HC+++T ++YTWG
Sbjct: 911 ENGNGQLGMG-NG-TPVQYKQPTKNTQLPDVVQVAAGGEHCIALTHDNKIYTWG 962
Score = 70 (29.7 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 23/81 (28%), Positives = 33/81 (40%)
Query: 55 VCGGGCGFALATSESGKLITWGSADDEGQ-SYLTSGKHGETP-----EPFPLPTEASVVK 108
V GG +A + K+ TWG + GQ LT+ + P LP +
Sbjct: 942 VAAGG-EHCIALTHDNKIYTWGD-NSHGQLGRLTNSMTAQMPGEVDFSEVNLPDYTIFAQ 999
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
A + C +T G+VY WG
Sbjct: 1000 VVATRSACFVLTMFGDVYGWG 1020
Score = 55 (24.4 bits), Expect = 2.9e-06, Sum P(3) = 2.9e-06
Identities = 27/108 (25%), Positives = 42/108 (38%)
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGH-GSTNDQL 330
PLL +S V I G HS V+ ++G L +G+ + Q L
Sbjct: 1142 PLLCDFPGNSSRALKNPDNVSTIGSGKFHSFVIKESGDFLAWGYNKFAQTAFVPPAASVL 1201
Query: 331 R-------PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFG 371
R PS +SL +V G+ +V ++ G+ +G Q G
Sbjct: 1202 RRDLKVDKPSTVASLRGQRVHFPTGGVDFSVALTAGGQCLSWGSFQDG 1249
>UNIPROTKB|H0YD20 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS50012 PANTHER:PTHR22870:SF7
HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058 EMBL:AC124078
Ensembl:ENST00000532546 Bgee:H0YD20 Uniprot:H0YD20
Length = 126
Score = 116 (45.9 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 28/75 (37%), Positives = 41/75 (54%)
Query: 392 LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNI 451
LE+ +A V G+ HSA LT+ G+V WG NK+GQL ++ +P + H F +
Sbjct: 25 LENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLA-NEAAFLPVPQKIEAHCFQNEKV 83
Query: 452 ACGW--WHTLLLAET 464
W W T L+A+T
Sbjct: 84 TAIWSGW-THLVAQT 97
>ASPGD|ASPL0000075377 [details] [associations]
symbol:AN10609 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0034551
"mitochondrial respiratory chain complex III assembly"
evidence=IEA] [GO:0031305 "integral to mitochondrial inner
membrane" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 EMBL:BN001303
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
EnsemblFungi:CADANIAT00005518 HOGENOM:HOG000197481 OMA:QRIECGR
Uniprot:C8V9T3
Length = 575
Score = 128 (50.1 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 38/109 (34%), Positives = 58/109 (53%)
Query: 342 QVEQIAAGLWHTVCISVEGRVYVFGGN-----QFGQLGT-GVDQAENVPKLLETP--ILE 393
++ I+ GL H + ++ GRV+ + FGQLG G+ A P ++ P +
Sbjct: 251 KIVAISGGLEHVLLLTSSGRVFSAVSSTENFPSFGQLGVPGLTWATRPPGPVDAPHEVKT 310
Query: 394 SKRAKV--VSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSL 440
KV ++ G HS +LT++G VL++G N +GQLGLG D N P L
Sbjct: 311 PNGVKVAQIATGDYHSLLLTKNGNVLAFGDNSFGQLGLG--FDPNSPFL 357
Score = 106 (42.4 bits), Expect = 3.4e-05, Sum P(4) = 3.4e-05
Identities = 25/53 (47%), Positives = 32/53 (60%)
Query: 341 IQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKL-LETPIL 392
++V QIA G +H++ ++ G V FG N FGQLG G D N P L TPIL
Sbjct: 314 VKVAQIATGDYHSLLLTKNGNVLAFGDNSFGQLGLGFDP--NSPFLDTPTPIL 364
Score = 53 (23.7 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 25/104 (24%), Positives = 42/104 (40%)
Query: 22 VYMWGY--LPGTSPEKSPILSPIPARLCGGDS--WKDVCGGGCGFALATSESGKLITWGS 77
+Y+WG PE + P RL DS +D+ G A A E+G L+ WG
Sbjct: 111 LYIWGNNKYRVVDPESKESVIKTPRRLSYFDSNVLRDLKLGETSGA-AIIENGDLVQWGK 169
Query: 78 ADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTE 121
E + T G+ + + V ++ G + + V++
Sbjct: 170 GYSETEFKPTKTLTGKNLISLSMSHDRIVALSSDGKVYSLPVSK 213
Score = 46 (21.3 bits), Expect = 3.4e-05, Sum P(4) = 3.4e-05
Identities = 18/56 (32%), Positives = 26/56 (46%)
Query: 176 VVKRRKTSS--AREESENP-ASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
V K +TS A E+S P +SG + L G KI ++ G H L+L+
Sbjct: 211 VSKHDQTSGKKAEEKSWLPFSSGKSSMSYRLIQPILKLGEKIVAISGGLEHVLLLT 266
Score = 45 (20.9 bits), Expect = 3.4e-05, Sum P(4) = 3.4e-05
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 416 VLSWGWNKYGQLGLGDSIDRNIPSLVPI 443
V+ WG N++ QLG G + + P+ + +
Sbjct: 497 VVWWGGNEHFQLGTGKRSNLSKPAHINV 524
>UNIPROTKB|H0YE53 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058
EMBL:AC124078 Ensembl:ENST00000533241 Uniprot:H0YE53
Length = 144
Score = 112 (44.5 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 24/69 (34%), Positives = 36/69 (52%)
Query: 360 GRVYVFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSCGARHSAVLTEDGQVLSW 419
G VYV+G N+ GQL VP+ +E ++++ + G H TE G++ +W
Sbjct: 4 GEVYVWGSNKHGQLANEAAFLP-VPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTW 62
Query: 420 GWNKYGQLG 428
G YGQLG
Sbjct: 63 GRADYGQLG 71
>MGI|MGI:1918426 [details] [associations]
symbol:Fbxo24 "F-box protein 24" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001810 PROSITE:PS50181 SMART:SM00256
MGI:MGI:1918426 INTERPRO:IPR000408 Pfam:PF00415 SUPFAM:SSF81383
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 CTD:26261
eggNOG:NOG327680 HOGENOM:HOG000253007 HOVERGEN:HBG051571 KO:K10304
OMA:EPTQVHY OrthoDB:EOG40ZQX6 EMBL:AK016870 IPI:IPI00283689
RefSeq:NP_081984.1 UniGene:Mm.474695 ProteinModelPortal:Q9D417
SMR:Q9D417 STRING:Q9D417 PhosphoSite:Q9D417 PRIDE:Q9D417
Ensembl:ENSMUST00000031732 GeneID:71176 KEGG:mmu:71176
UCSC:uc009adc.1 GeneTree:ENSGT00390000017455 InParanoid:Q9D417
ChiTaRS:FBXO24 NextBio:333227 Bgee:Q9D417 CleanEx:MM_FBXO24
Genevestigator:Q9D417 GermOnline:ENSMUSG00000029719 Uniprot:Q9D417
Length = 589
Score = 134 (52.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 34/82 (41%), Positives = 50/82 (60%)
Query: 388 ETPILESKRAKVVSC--GARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHG 445
+ P+ S AKV+ C G H ++ E G++ G N+YGQLG GD +DR P+ V H
Sbjct: 358 QMPLALSLPAKVLFCALGYNHLGLVDEFGRIFMQGNNRYGQLGTGDKMDRGEPTQV--H- 414
Query: 446 FLPRNIA--CGWWHTLLLAETT 465
+L R IA CG H+L+L++T+
Sbjct: 415 YLQRPIALWCGLNHSLVLSQTS 436
>UNIPROTKB|I3LMD9 [details] [associations]
symbol:FBXO24 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001810 InterPro:IPR018527 PROSITE:PS00202
PROSITE:PS50181 SMART:SM00256 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0046872 SUPFAM:SSF81383 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS50012 OMA:EPTQVHY
GeneTree:ENSGT00390000017455 EMBL:FP565722
Ensembl:ENSSSCT00000031465 Uniprot:I3LMD9
Length = 616
Score = 133 (51.9 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 46/132 (34%), Positives = 71/132 (53%)
Query: 338 LMDIQVEQIAAGLWHTVCISVEGRVY--VFGGNQFGQLGTGVDQAENVPKLLETPILESK 395
L ++V +A+ T+ I+ +G VY V + L G QA + P + P+ S
Sbjct: 335 LPHLRVACMASNQSSTLYITDQGGVYFEVHTPGVYRDL-FGTLQAFD-PLDQQMPLALSL 392
Query: 396 RAKVVSC--GARHSAVLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIA- 452
AK++ C G H ++ E G++ G N+YGQLG GD +DR P+ V H +L R IA
Sbjct: 393 PAKILFCALGYNHLGLVDEFGRIFMQGNNRYGQLGTGDKMDRGEPTQV--H-YLQRPIAL 449
Query: 453 -CGWWHTLLLAE 463
CG H+L+L++
Sbjct: 450 WCGLNHSLVLSQ 461
>SGD|S000004067 [details] [associations]
symbol:FMP25 "Protein required for assembly of respiratory
complex III" species:4932 "Saccharomyces cerevisiae" [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0031966 "mitochondrial membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0034551
"mitochondrial respiratory chain complex III assembly"
evidence=IMP] [GO:0031305 "integral to mitochondrial inner
membrane" evidence=IDA] [GO:0016020 "membrane" evidence=IEA]
SGD:S000004067 INTERPRO:IPR000408 Pfam:PF00415 EMBL:BK006945
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0031305
EMBL:U53880 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GO:GO:0034551 EMBL:Z73250 EMBL:Z73249 EMBL:AY723844
PIR:S64909 RefSeq:NP_013178.1 ProteinModelPortal:Q08023 SMR:Q08023
DIP:DIP-4474N IntAct:Q08023 MINT:MINT-504101 STRING:Q08023
PaxDb:Q08023 PeptideAtlas:Q08023 EnsemblFungi:YLR077W GeneID:850766
KEGG:sce:YLR077W CYGD:YLR077w HOGENOM:HOG000111193 OMA:KLIEPED
OrthoDB:EOG4ZCXDB NextBio:966924 Genevestigator:Q08023
GermOnline:YLR077W Uniprot:Q08023
Length = 583
Score = 117 (46.2 bits), Expect = 5.2e-05, Sum P(3) = 5.2e-05
Identities = 40/159 (25%), Positives = 67/159 (42%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQCG------------HGSTNDQLRPSYAS-- 336
+K+IACG H+ + G + FGW +GQ S +P +
Sbjct: 374 IKKIACGSYHTLAIDKTGEIYAFGWNRFGQLALPISYNLEYVSFPRSVTHAFKPHFPGMT 433
Query: 337 --SLMDIQVEQIAAGLWHTVCISVEGRVY-VFGGNQFGQLGTGV-DQAENVPKLLETPIL 392
+DI + + + S Y FG FG+LG ++ P +++
Sbjct: 434 NWKCVDIHCDDETSFVTIRKPGSTSDHHYFAFGNGLFGELGNNTFKNSQCDPIKIKS--- 490
Query: 393 ESKRAKVVSCGARHSAVLTE-DGQVLSWGWNKYGQLGLG 430
+ K+ SCG+ TE + +V++WG N +GQLG+G
Sbjct: 491 DDKKLTNWSCGSHCVFTETEQENEVIAWGNNDHGQLGIG 529
Score = 57 (25.1 bits), Expect = 5.2e-05, Sum P(3) = 5.2e-05
Identities = 22/80 (27%), Positives = 35/80 (43%)
Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTR-DFGSAGSFQKDSTGKQSALP 161
E VV+ AG H V ++ G+ Y A+V++ FG Q D + L
Sbjct: 294 EKRVVQFDAGSHHLVLLSNLGKAYCCATGNDQKQAQVSKGQFGIPTFSQFDEFPPNNQLF 353
Query: 162 TEQAPPSDKRAGEEVVKRRK 181
+ K GE+VV++R+
Sbjct: 354 EIELLNKFKHEGEDVVRKRE 373
Score = 38 (18.4 bits), Expect = 5.2e-05, Sum P(3) = 5.2e-05
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 213 KITKVAAGGRHTLIL 227
+I K+A G HTL +
Sbjct: 373 EIKKIACGSYHTLAI 387
>DICTYBASE|DDB_G0289237 [details] [associations]
symbol:tirA "Toll-Interleukin (TIR) receptor
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0008283 "cell proliferation" evidence=IMP] [GO:0006952 "defense
response" evidence=IMP] [GO:0007165 "signal transduction"
evidence=IEA] InterPro:IPR000157 InterPro:IPR002110 Pfam:PF13676
PROSITE:PS50088 PROSITE:PS50104 SMART:SM00248 InterPro:IPR001357
dictyBase:DDB_G0289237 Pfam:PF00533 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0007165 GO:GO:0006952 GO:GO:0008283 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GenomeReviews:CM000154_GR GO:GO:0005622 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:AAFI02000131
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 SMART:SM00292
SUPFAM:SSF52113 PROSITE:PS50172 SUPFAM:SSF52200 RefSeq:XP_636358.1
ProteinModelPortal:Q54HT1 EnsemblProtists:DDB0232375 GeneID:8627031
KEGG:ddi:DDB_G0289237 eggNOG:NOG261364 InParanoid:Q54HT1
OMA:WRAEITR Uniprot:Q54HT1
Length = 1336
Score = 131 (51.2 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 40/106 (37%), Positives = 55/106 (51%)
Query: 342 QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLG--TG----VDQAENVPKLLETPILES- 394
QV+ + G H+V I G ++ G N+FGQLG G + N ++E I S
Sbjct: 379 QVDYCSVGGSHSVMIK-RG-IHTVGLNKFGQLGYKNGNTNCIGGGGNNKLMIENQIQRSI 436
Query: 395 --------KRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGLGDS 432
K+ +VSCG + +LT +GQV SWG N GQLGLG+S
Sbjct: 437 SIINQNFLKKVLMVSCGKDFNVLLTNEGQVFSWGKNDQGQLGLGNS 482
>FB|FBgn0037116 [details] [associations]
symbol:CG7158 species:7227 "Drosophila melanogaster"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0017112 "Rab
guanyl-nucleotide exchange factor activity" evidence=ISS]
[GO:0031982 "vesicle" evidence=ISS] [GO:0035011 "melanotic
encapsulation of foreign target" evidence=IMP] INTERPRO:IPR000408
Pfam:PF00415 Pfam:PF02204 EMBL:AE014296 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 eggNOG:COG4642
InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493 SMART:SM00698
PROSITE:PS51205 GeneTree:ENSGT00600000084242 KO:K04575
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0035011 EMBL:AY061403
RefSeq:NP_649347.1 UniGene:Dm.3610 SMR:Q9VNZ8 IntAct:Q9VNZ8
MINT:MINT-1031217 EnsemblMetazoa:FBtr0078462 GeneID:40410
KEGG:dme:Dmel_CG7158 UCSC:CG7158-RA FlyBase:FBgn0037116
InParanoid:Q9VNZ8 OMA:HWFILFN OrthoDB:EOG4S7H4T GenomeRNAi:40410
NextBio:818636 Uniprot:Q9VNZ8
Length = 1486
Score = 130 (50.8 bits), Expect = 0.00013, P = 0.00013
Identities = 47/163 (28%), Positives = 70/163 (42%)
Query: 270 DRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL-------YGQCG 322
D L + S + R+ VK I+ G +V + LL G+ L +G
Sbjct: 207 DDALQLSVASAKEEPEDERASVKSISSGHSERSVAANTRHLLHQGYALLHTQLFTFGASN 266
Query: 323 HG--STNDQLRPSYASSLMDIQ---VEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGV 377
+G + D +R + L + V IAAGL HTV +++GR+Y +G N QLG V
Sbjct: 267 NGLLGSGDHIRRANVMRLQKLDSMGVCSIAAGLEHTVARTLDGRLYHWGLNNHSQLGEDV 326
Query: 378 DQAENVPKLLETPIL--ESKRAKVVSCGARHSAVLTEDGQVLS 418
+ T L E A +CG H+ +L GQ+ S
Sbjct: 327 SSPMEITITENTAALPIEQNSALEATCGDYHTLLLNASGQIHS 369
>UNIPROTKB|O75426 [details] [associations]
symbol:FBXO24 "F-box only protein 24" species:9606 "Homo
sapiens" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=NAS] [GO:0016567 "protein ubiquitination" evidence=NAS]
[GO:0000151 "ubiquitin ligase complex" evidence=NAS]
InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181 SMART:SM00256
INTERPRO:IPR000408 Pfam:PF00415 SUPFAM:SSF81383 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:CH236956 EMBL:CH471091
EMBL:AF053356 GO:GO:0004842 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0000151 EMBL:AF174604 EMBL:AL136811
EMBL:AK301864 EMBL:AK302252 EMBL:AC069281 EMBL:BC067293
IPI:IPI00025705 IPI:IPI00219503 IPI:IPI00939223 IPI:IPI00943736
RefSeq:NP_001156971.1 RefSeq:NP_036304.2 RefSeq:NP_277041.1
UniGene:Hs.283764 ProteinModelPortal:O75426 SMR:O75426
IntAct:O75426 STRING:O75426 PhosphoSite:O75426 PaxDb:O75426
PRIDE:O75426 Ensembl:ENST00000241071 Ensembl:ENST00000360609
Ensembl:ENST00000427939 Ensembl:ENST00000465843
Ensembl:ENST00000468962 GeneID:26261 KEGG:hsa:26261 UCSC:uc003uvl.1
UCSC:uc003uvm.1 CTD:26261 GeneCards:GC07P100181 HGNC:HGNC:13595
MIM:609097 neXtProt:NX_O75426 PharmGKB:PA28037 eggNOG:NOG327680
HOGENOM:HOG000253007 HOVERGEN:HBG051571 InParanoid:O75426 KO:K10304
OMA:EPTQVHY OrthoDB:EOG40ZQX6 PhylomeDB:O75426 GenomeRNAi:26261
NextBio:48517 ArrayExpress:O75426 Bgee:O75426 CleanEx:HS_FBXO24
Genevestigator:O75426 GermOnline:ENSG00000106336 Uniprot:O75426
Length = 580
Score = 124 (48.7 bits), Expect = 0.00018, P = 0.00018
Identities = 40/120 (33%), Positives = 65/120 (54%)
Query: 353 TVCISVEGRVY--VFGGNQFGQLGTGVDQAENVPKLLETPILESKRAKVVSC--GARHSA 408
T+ ++ +G VY V + L G QA + P + P+ S AK++ C G H
Sbjct: 313 TLYVTDQGGVYFEVHTPGVYRDL-FGTLQAFD-PLDQQMPLALSLPAKILFCALGYNHLG 370
Query: 409 VLTEDGQVLSWGWNKYGQLGLGDSIDRNIPSLVPIHGFLPRNIA--CGWWHTLLLAETTQ 466
++ E G++ G N+YGQLG GD +DR P+ V +L R I CG H+L+L+++++
Sbjct: 371 LVDEFGRIFMQGNNRYGQLGTGDKMDRGEPTQVC---YLQRPITLWCGLNHSLVLSQSSE 427
>POMBASE|SPCC330.11 [details] [associations]
symbol:btb1 "BTB/POZ domain protein Btb1" species:4896
"Schizosaccharomyces pombe" [GO:0000151 "ubiquitin ligase complex"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IC] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00023 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 UniPathway:UPA00143
PomBase:SPCC330.11 INTERPRO:IPR000408 Pfam:PF00415 EMBL:CU329672
GenomeReviews:CU329672_GR Gene3D:1.25.40.20 InterPro:IPR020683
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0006511 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0000151 eggNOG:COG5184
PIR:T41321 RefSeq:NP_587711.1 ProteinModelPortal:O74881
IntAct:O74881 STRING:O74881 EnsemblFungi:SPCC330.11.1
GeneID:2538714 KEGG:spo:SPCC330.11 OMA:STSELCT OrthoDB:EOG42VCR5
NextBio:20799899 Uniprot:O74881
Length = 1347
Score = 127 (49.8 bits), Expect = 0.00024, P = 0.00024
Identities = 46/166 (27%), Positives = 77/166 (46%)
Query: 273 LLVRQGSVNSSGKA-GRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
LL Q +SG+ R + ++ HS V+TD + + G+ G G N ++
Sbjct: 178 LLKNQTESPTSGQLFSRDKILDVQASKFHSVVLTDEPSQNVYVCGI-GAGGRIGFNTDVQ 236
Query: 332 PSYASSLMDI-QVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETP 390
++ I +V QI+ H++ ++ G +Y +G N G+LG D+ + + TP
Sbjct: 237 YNFIPIPGIIHKVIQISVSHTHSLALTKFGSIYSWGKNGSGELGLSNDELKKDDPIQITP 296
Query: 391 --ILESKRAKVVSCGARHS-AVLTEDGQVLSWGWNKYGQLGLGDSI 433
I K +++ A S +V D + SWG N GQLG+ D I
Sbjct: 297 RRISAFKDYQIIGMAAGKSYSVAWTDTDIYSWGLNN-GQLGISDHI 341
>CGD|CAL0000172 [details] [associations]
symbol:orf19.7574 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
SMART:SM00248 CGD:CAL0000172 INTERPRO:IPR000408 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:AACQ01000032
PROSITE:PS50012 eggNOG:COG5184 RefSeq:XP_719336.1
ProteinModelPortal:Q5ACR8 GeneID:3638930 KEGG:cal:CaO19.7574
HOGENOM:HOG000094547 Uniprot:Q5ACR8
Length = 1439
Score = 126 (49.4 bits), Expect = 0.00033, P = 0.00033
Identities = 40/158 (25%), Positives = 66/158 (41%)
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
P L + + + K G S + C + V D+ T LY +T+ L
Sbjct: 164 PFL-KSSEILWTDKRGASEIYVFGCNSNNQLGVGDSTDRATPAL-LYHDNFKFATD--LT 219
Query: 332 PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
S + + ++I H+V ++ +G ++ G G+LG G+ N K
Sbjct: 220 GSISERFKRPRYKRITISKNHSVVVTQDGELFSCGVGSRGRLGHGLTDLNNYFKFKRIEF 279
Query: 392 LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
K K V+ + HS LT D +V +WG N + QLG+
Sbjct: 280 FNDKTIKDVAISSNHSIALTTDNEVYAWGLNSFNQLGV 317
>UNIPROTKB|Q5ACR8 [details] [associations]
symbol:CaO19.7574 "Potential ankyrin repeat protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
SMART:SM00248 CGD:CAL0000172 INTERPRO:IPR000408 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:AACQ01000032
PROSITE:PS50012 eggNOG:COG5184 RefSeq:XP_719336.1
ProteinModelPortal:Q5ACR8 GeneID:3638930 KEGG:cal:CaO19.7574
HOGENOM:HOG000094547 Uniprot:Q5ACR8
Length = 1439
Score = 126 (49.4 bits), Expect = 0.00033, P = 0.00033
Identities = 40/158 (25%), Positives = 66/158 (41%)
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLR 331
P L + + + K G S + C + V D+ T LY +T+ L
Sbjct: 164 PFL-KSSEILWTDKRGASEIYVFGCNSNNQLGVGDSTDRATPAL-LYHDNFKFATD--LT 219
Query: 332 PSYASSLMDIQVEQIAAGLWHTVCISVEGRVYVFGGNQFGQLGTGVDQAENVPKLLETPI 391
S + + ++I H+V ++ +G ++ G G+LG G+ N K
Sbjct: 220 GSISERFKRPRYKRITISKNHSVVVTQDGELFSCGVGSRGRLGHGLTDLNNYFKFKRIEF 279
Query: 392 LESKRAKVVSCGARHSAVLTEDGQVLSWGWNKYGQLGL 429
K K V+ + HS LT D +V +WG N + QLG+
Sbjct: 280 FNDKTIKDVAISSNHSIALTTDNEVYAWGLNSFNQLGV 317
>UNIPROTKB|G4NC24 [details] [associations]
symbol:MGG_00456 "BTB domain and ankyrin repeat protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
SMART:SM00248 INTERPRO:IPR000408 EMBL:CM001235 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 RefSeq:XP_003718611.1
ProteinModelPortal:G4NC24 EnsemblFungi:MGG_00456T0 GeneID:2674172
KEGG:mgr:MGG_00456 Uniprot:G4NC24
Length = 1598
Score = 125 (49.1 bits), Expect = 0.00048, P = 0.00048
Identities = 45/150 (30%), Positives = 73/150 (48%)
Query: 300 HSAVVTD--AGALLTFGWGLYGQCGHGSTNDQLRPSYA---SSLMDIQVEQIAAGLWHTV 354
HSAV+T L G G G+ G S + ++R +Y +L D +V Q+ G HT+
Sbjct: 331 HSAVITTDPVSNLYICGVGRGGRLGL-SDDQRVRFTYVPVQGALADRKVTQVVLGQDHTM 389
Query: 355 CISVEGRVYVFGGNQFGQLGTGVD---QAENVP-KLLETPILESKRAKVV---SCGARHS 407
++ +G ++ +G N + QLG + + + P L + + + +VV S A HS
Sbjct: 390 AVTDKGELWTWGSNAYSQLGYALPPPAKKDEEPMSLAPKQVFGALKKEVVIGVSASAIHS 449
Query: 408 AVLTEDGQVLSWGWNKYGQLGLGDSIDRNI 437
T + V WG N GQL L D+ R++
Sbjct: 450 VAHTTNS-VFCWGKNS-GQLALMDADSRSL 477
>UNIPROTKB|J3KQ33 [details] [associations]
symbol:ALS2 "Alsin" species:9606 "Homo sapiens" [GO:0001662
"behavioral fear response" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0001726 "ruffle"
evidence=IEA] [GO:0001881 "receptor recycling" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0007626
"locomotory behavior" evidence=IEA] [GO:0008104 "protein
localization" evidence=IEA] [GO:0008219 "cell death" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016050 "vesicle organization"
evidence=IEA] [GO:0016197 "endosomal transport" evidence=IEA]
[GO:0016601 "Rac protein signal transduction" evidence=IEA]
[GO:0030027 "lamellipodium" evidence=IEA] [GO:0030424 "axon"
evidence=IEA] [GO:0030426 "growth cone" evidence=IEA] [GO:0032313
"regulation of Rab GTPase activity" evidence=IEA] [GO:0035249
"synaptic transmission, glutamatergic" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IEA] INTERPRO:IPR000408
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 EMBL:AC007242
EMBL:AC007279 HGNC:HGNC:443 ChiTaRS:ALS2 PROSITE:PS50012
ProteinModelPortal:J3KQ33 Ensembl:ENST00000409632 Uniprot:J3KQ33
Length = 139
Score = 77 (32.2 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 23/59 (38%), Positives = 32/59 (54%)
Query: 88 SGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG---WR----ECVPSAKV 139
+G TPE P +V++AA G H V +TE GEVY++G WR E PS+ +
Sbjct: 25 AGSFPITPERLPGWGGKTVLQAALGVKHGVLLTEDGEVYSFGTLPWRSGPVEICPSSPI 83
Score = 65 (27.9 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 17/43 (39%), Positives = 19/43 (44%)
Query: 290 YVKEIACGGRHSAVVTDAGALLTFGWGLYGQCGHGSTNDQLRP 332
YV +A G HS VTD G +G GQC N Q P
Sbjct: 92 YVITVATGSFHSGAVTDNGVAYMWGENSAGQCA--VANQQYVP 132
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.133 0.417 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 467 437 0.00088 118 3 11 22 0.44 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 230
No. of states in DFA: 617 (66 KB)
Total size of DFA: 278 KB (2143 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 38.19u 0.09s 38.28t Elapsed: 00:00:03
Total cpu time: 38.38u 0.09s 38.47t Elapsed: 00:00:03
Start: Thu May 9 23:33:42 2013 End: Thu May 9 23:33:45 2013
WARNINGS ISSUED: 1